BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780399|ref|YP_003064812.1| DNA mismatch repair protein [Candidatus Liberibacter asiaticus str. psy62] (594 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|254780399|ref|YP_003064812.1| DNA mismatch repair protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040076|gb|ACT56872.1| DNA mismatch repair protein [Candidatus Liberibacter asiaticus str. psy62] Length = 594 Score = 627 bits (1617), Expect = e-177, Method: Composition-based stats. Identities = 594/594 (100%), Positives = 594/594 (100%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG Sbjct: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ Sbjct: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP Sbjct: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP Sbjct: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH Sbjct: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT Sbjct: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS Sbjct: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL Sbjct: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM Sbjct: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR Sbjct: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 >gi|53804020|ref|YP_114135.1| DNA mismatch repair protein [Methylococcus capsulatus str. Bath] gi|53757781|gb|AAU92072.1| DNA mismatch repair protein MutL [Methylococcus capsulatus str. Bath] Length = 611 Score = 587 bits (1514), Expect = e-165, Method: Composition-based stats. Identities = 217/598 (36%), Positives = 345/598 (57%), Gaps = 5/598 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+IR+L ++INQIAAGE+IERP+ +KEL+EN+ DA + +VE + GG ++ D+G Sbjct: 13 MRIRRLPPQLINQIAAGEVIERPASVVKELVENAFDAGARQVEVDVEQGGVRLIRVRDDG 72 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A+ RH TSKI+ +D + + GFRGEALPSI AV+ LTL SR G Sbjct: 73 CGIDREDLGLALSRHATSKIASLEDLERVASMGFRGEALPSISAVARLTLTSRTADVPCG 132 Query: 119 AQIAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q++ G + ++P GT VEVRDLF+ PAR FL++E+ E I +++RMA+ Sbjct: 133 WQVSADGSESDFDIQPAQHAQGTTVEVRDLFYNTPARRKFLRAEKTEFGHIQTLVQRMAL 192 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V F + ++ + G PERI + G DF+ A+ + +++ + L G+ Sbjct: 193 ARFDVGFRLRHNQREVLRLQPDAEEGGRPERIGALCGPDFLEQALRVEFEASGLRLHGWV 252 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+PTF+R A+ + ++N R ++DK + IR AY + + R PV VL LEIDP VDV Sbjct: 253 GLPTFSRSQADLQFFYVNHRPIRDKLVGHAIRQAYQDVLYHQRQPVYVLYLEIDPALVDV 312 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 N HPAK +RFR ++ +F+ ++ +AI ++ + + A + + Sbjct: 313 NAHPAKLEVRFREGRMVHDFLFSALHRAIAGHRPGRTASVVAAPATEHPAPLAEQPQQSQ 372 Query: 358 YA-TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 + T ++ +L T L + S N +E LG A A + Sbjct: 373 QPLFRVAETPQRPYLSSGDSETLGDLRRL-YSVSLPNPTETRAEQEIPPLGYALAHLKGV 431 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 YI+++ GL++VD HAAHER+ +E+M++ + + I SQ LL P I L + L E+ Sbjct: 432 YILAENAQGLILVDGHAAHERITYERMKRQYQAGGIASQPLLLPVRIRLSRADADLAEEY 491 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L RLGI+ R G ++ +R +PA+L ++ +L+RD + ++ + ++ LQ+ + + Sbjct: 492 GEHLARLGIELRRTGEGSVLVRSVPALLEGSDVERLVRDTLADLREHGSSGRLQETLNTV 551 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LA+MAC+GS+R+GRK+ EMN LLREME + QCNHGRPT+++L +++LF R Sbjct: 552 LASMACHGSVRAGRKLTVPEMNALLREMEATERAGQCNHGRPTWVQLDTQALDRLFLR 609 >gi|83648044|ref|YP_436479.1| DNA mismatch repair protein [Hahella chejuensis KCTC 2396] gi|83636087|gb|ABC32054.1| DNA mismatch repair enzyme (predicted ATPase) [Hahella chejuensis KCTC 2396] Length = 612 Score = 587 bits (1514), Expect = e-165, Method: Composition-based stats. Identities = 214/608 (35%), Positives = 354/608 (58%), Gaps = 15/608 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI LS ++ NQIAAGE++ERPS +KEL+EN+LDA + ++E I GG +I D+G Sbjct: 3 KIHLLSPRLANQIAAGEVVERPSSVVKELVENALDAGARKIEVDIENGGVKLIRIRDDGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A+ RH TSKI +D + T GFRGEAL SI +VS L L SRP Sbjct: 63 GIPREDLPLALSRHATSKIETLEDLEAVATLGFRGEALASICSVSRLALTSRPQNQGEAW 122 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ + G ++ P A PGT VEVRDLF+ PAR F+++E+ E I ++I+R A+ Sbjct: 123 KVEVEGREMKPEISPAAHTPGTTVEVRDLFYNTPARRKFMRTEKTEFGHIEEIIKRQALG 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+FT + +++ ++ + RI Q+ G +FI +A+ +N ++ ++L G+ Sbjct: 183 RLSVAFTLRHNQKVVHQLRPAASEEDHIRRIGQLCGANFIESAIPINVSASGLSLTGWVA 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 PTF+R A+ Y F+NGR ++DK + +R AY + + GR+P VL LE+DP VDVN Sbjct: 243 KPTFSRSQADLQYFFVNGRVIRDKLVAHAVRQAYQDVLYHGRHPAFVLYLELDPATVDVN 302 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH-------QDNAP 351 VHP K +RFR ++ +F+ +S+ +A+ + ++V + ++ QD P Sbjct: 303 VHPTKHEVRFREGRMVHDFLFRSLHRALAEVKPQAAAVETLPVVEQERPVMQWPTQDALP 362 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE-----SEATHYQL 406 P + +++S L E+ +A L Sbjct: 363 LRQQPAASGFSMTGNPPASAVRDQISAYGQLHDKSGLSDMFGAAPEKVLSVVDDAVEAPL 422 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 G A AQ+H ++++Q G+V+VD HAAHER+++E+M++ +++ +T+Q +L P + + Sbjct: 423 GYAIAQLHGVFVLAQNAQGMVLVDMHAAHERIVYERMKRSLHNSGVTTQPMLVPMNLAVS 482 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 E + E+ E L +LG++ G +I +R++PA+L N+ L+RD+I E+ + +T Sbjct: 483 RRESLAVEENAETLRQLGLEITAAGAESIIVRQVPALLRNANVEALVRDVIAELAEHGST 542 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 +++ + +L TMAC+G++R+ R++ EMN LLR+ME S QCNHGRPT+++L +S Sbjct: 543 RKVEETMNELLGTMACHGAVRANRQLTIAEMNALLRDMEDTERSGQCNHGRPTWVQLTMS 602 Query: 587 DIEKLFGR 594 +++KLF R Sbjct: 603 ELDKLFLR 610 >gi|327482309|gb|AEA85619.1| DNA mismatch repair protein [Pseudomonas stutzeri DSM 4166] Length = 625 Score = 583 bits (1504), Expect = e-164, Method: Composition-based stats. Identities = 218/618 (35%), Positives = 351/618 (56%), Gaps = 25/618 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R+E + GG ++ D+G Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVIKELLENSLDSGAGRIEVDVEQGGVKLLRVRDDGC 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+A+ RH TSKI D D + + GFRGEAL SI +VS LTL SR + Sbjct: 66 GIPPDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTADASEAW 125 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ + +P A GT VEVRDLFF PAR FL++E+ E + + +VI+R+A+A Sbjct: 126 QVETEGREMEARVQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEFDHLQEVIKRLALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + + R++ V G F+ A+ + + N + L G+ G Sbjct: 186 RFDVAFHLRHNGKGVLALHQANDDSARARRVAAVCGPAFLEQALPIEIERNGLRLWGWVG 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y ++NGR V+DK + +R AY + + GR+P VL L++DP VDVN Sbjct: 246 LPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLDVDPAVVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ ++ S ++ + A + Sbjct: 306 VHPTKHEVRFRDSRMVHDFLYGTLHRALGDVRPEDQLAAPASVAPMTQVSGLAAGEFAGQ 365 Query: 353 THLPKYATSLTNTQEKLFL--------QENRLSTNDLLPSDDPTYSEDNDPVEES----- 399 + + A+ L Q + Q R ++ Y E P+ ES Sbjct: 366 SEMSLSASVLERPQGETSAWRGAGAGYQAPRPASAGYTAEAQGAYREFFTPLPESAAAPL 425 Query: 400 ---EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 + LG A AQ+ YI+++ G+V+VD HAAHER+ +E+++ S + Q Sbjct: 426 PASQDDVPPLGYALAQLKGVYILAENAQGMVLVDMHAAHERITYERLKTAMASEGLRGQP 485 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 LL PE I L + E EH + LG + +R GP +AIR+IP++L + QL+RD+ Sbjct: 486 LLVPESIALSQREADCAEEHAQWFQMLGFELQRLGPETLAIRQIPSLLKQAEATQLVRDV 545 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 + ++++ T+ +Q + +LATMAC+G++R+ R++ EMN LLR+ME S QCNHG Sbjct: 546 LADLLEYGTSDRIQAHLNELLATMACHGAVRANRRLTLPEMNALLRDMEHTERSGQCNHG 605 Query: 577 RPTFIKLKLSDIEKLFGR 594 RPT+ +L + D++KLF R Sbjct: 606 RPTWTQLGMDDLDKLFLR 623 >gi|146283982|ref|YP_001174135.1| DNA mismatch repair protein [Pseudomonas stutzeri A1501] gi|167017345|sp|A4VQP2|MUTL_PSEU5 RecName: Full=DNA mismatch repair protein mutL gi|145572187|gb|ABP81293.1| DNA mismatch repair protein MutL [Pseudomonas stutzeri A1501] Length = 625 Score = 583 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 218/618 (35%), Positives = 350/618 (56%), Gaps = 25/618 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R+E + GG ++ D+G Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVIKELLENSLDSGAGRIEVDVEQGGVKLLRVRDDGC 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+A+ RH TSKI D D + + GFRGEAL SI +VS LTL SR + Sbjct: 66 GIPPDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTADASEAW 125 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ + +P A GT VEVRDLFF PAR FL++E+ E + + +VI+R+A+A Sbjct: 126 QVETEGREMEARVQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEFDHLQEVIKRLALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + + R++ V G F+ A+ + + N + L G+ G Sbjct: 186 RFDVAFHLRHNGKGVLALHQANDDSARARRVAAVCGPAFLEQALPIEIERNGLRLWGWVG 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y ++NGR V+DK + +R AY + + GR+P VL L++DP VDVN Sbjct: 246 LPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLDVDPAVVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ ++ S ++ + A + Sbjct: 306 VHPTKHEVRFRDSRMVHDFLYGTLHRALGDVRPEDQLAAPASVAPMTQVSGLAAGEFAGQ 365 Query: 353 THLPKYATSLTNTQEK--------LFLQENRLSTNDLLPSDDPTYSEDNDPVEES----- 399 + A+ L Q + Q R ++ Y E P+ ES Sbjct: 366 NEMSLSASVLERPQGETPAWRGAGAGYQAPRPASAGYTAEAQGAYREFFTPLPESAAAPL 425 Query: 400 ---EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 + LG A AQ+ YI+++ G+V+VD HAAHER+ +E+++ S + Q Sbjct: 426 PASQDDVPPLGYALAQLKGVYILAENAQGMVLVDMHAAHERITYERLKTAMASEGLRGQP 485 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 LL PE I L + E EH + LG + +R GP +AIR+IP++L + QL+RD+ Sbjct: 486 LLVPESIALSQREADCAEEHAQWFQMLGFELQRLGPETLAIRQIPSLLKQAEATQLVRDV 545 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 + ++++ T+ +Q + +LATMAC+G++R+ R++ EMN LLR+ME S QCNHG Sbjct: 546 LADLLEYGTSDRIQAHLNELLATMACHGAVRANRRLTLPEMNALLRDMEHTERSGQCNHG 605 Query: 577 RPTFIKLKLSDIEKLFGR 594 RPT+ +L + D++KLF R Sbjct: 606 RPTWTQLGMDDLDKLFLR 623 >gi|146305668|ref|YP_001186133.1| DNA mismatch repair protein [Pseudomonas mendocina ymp] gi|145573869|gb|ABP83401.1| DNA mismatch repair protein MutL [Pseudomonas mendocina ymp] Length = 623 Score = 578 bits (1489), Expect = e-162, Method: Composition-based stats. Identities = 216/619 (34%), Positives = 340/619 (54%), Gaps = 26/619 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ KEL+ENSLD+ + R++ + GG ++ D+G Sbjct: 3 RIHLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDVEVEQGGVKLLKVRDDGG 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI +VS LTL SR + Sbjct: 63 GIAADDLPLALARHATSKIRELEDLEAVLSMGFRGEALASISSVSRLTLTSRTADADQAW 122 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + +P A GT VEVRDLFF PAR FL++E+ E + + +VI+R+A+A Sbjct: 123 QVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALA 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F + ++ + R++ V G F+ A+ + + + L G+ G Sbjct: 183 RFDVAFHLRHNGKTVFALHEAGDEISRARRVAAVCGPAFLEQALPIEIERGGLRLWGWVG 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y ++NGR V+DK + +R AY + + GR+P VL LEIDP VDVN Sbjct: 243 LPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEIDPSTVDVN 302 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS----------SFHQD 348 VHP K +RFR+ ++ +F+ ++ +A+ ++ F Sbjct: 303 VHPTKHEVRFRDSRMVHDFLYGTLHRALADVRPEDQVAAPAAVMPMVRATGLAAGEFGPQ 362 Query: 349 NAPKTHLPKYATSLTNTQEK-----LFLQENRLSTNDLLPSDDPTYSED--------NDP 395 T + N Q Q+ S + Y E P Sbjct: 363 GEMGLAASVLETPVANPQPAWRGAGAGYQQPAGSPGVPVAEAQAAYREYFAPLPGAQPAP 422 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 + + + LG A AQ+ YI+++ G+V+VD HAAHER+ +E+++Q S + Q Sbjct: 423 LPQEQGDIPPLGYAVAQLKGVYILAENAQGMVVVDMHAAHERITYERLKQAMASEGLRGQ 482 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL PE I L + E EH E RLG + +R G +AIR+IPA+L + QL+RD Sbjct: 483 PLLVPESIALSQREADCAEEHGEWFQRLGFELQRLGEETVAIRQIPALLKQAEATQLVRD 542 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 ++ ++++ T+ +Q + +LATMAC+G++R+ R++ EMN LLR+ME+ S QCNH Sbjct: 543 VLADLLEYGTSDRIQAHLNELLATMACHGAVRANRRLTLPEMNALLRDMEQTERSGQCNH 602 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRPT+ +L + D++KLF R Sbjct: 603 GRPTWTQLGMDDLDKLFLR 621 >gi|192359923|ref|YP_001983535.1| DNA mismatch repair protein [Cellvibrio japonicus Ueda107] gi|238692427|sp|B3PDC3|MUTL_CELJU RecName: Full=DNA mismatch repair protein mutL gi|190686088|gb|ACE83766.1| DNA mismatch repair protein MutL [Cellvibrio japonicus Ueda107] Length = 626 Score = 577 bits (1487), Expect = e-162, Method: Composition-based stats. Identities = 222/619 (35%), Positives = 333/619 (53%), Gaps = 26/619 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ LS ++ NQIAAGE++ERPS IKEL+ENSLDA ++R++ I GG ++ DNG Sbjct: 6 KIKLLSPRLANQIAAGEVVERPSSVIKELLENSLDAGATRLDIEIEDGGIKLMRVRDNGG 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+A+ RH TSKI DD + T GFRGEAL SI +V+ L L+S +++ G Sbjct: 66 GIDKDDLPLALSRHATSKIYELDDLEAVATLGFRGEALASISSVARLALVSSTSEDSAGW 125 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + + P GT VEVRDLFF PAR FL+SE+ E + DV++R+A++ Sbjct: 126 QVVAEGRDMETQISPAPHPRGTTVEVRDLFFNTPARRKFLRSEKTEYTHLEDVVKRLALS 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F Y + R++QV G F+ NAV + + + L G+ Sbjct: 186 RFDVAFNLRHNGRAIYAWRAGDSQLEQERRVAQVCGPAFMENAVFIEMERGSLRLWGWVA 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 PTF+R A+ + ++NGR ++DK + +R AY + + GR+P VL LE+DP VDVN Sbjct: 246 QPTFSRSQADLQHFYVNGRAIRDKLVSHAVRQAYQDVLYHGRHPAFVLYLELDPSTVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K +RFR+ + +FI S+ A+ K + + AP P+ Sbjct: 306 VHPTKHEVRFRDNRTVHDFIYSSLHHALAKVRPEDTLARKAADLGEDTPGIAPYAVSPRP 365 Query: 359 --------------ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE------ 398 A S + + + + TY E E Sbjct: 366 LVEGIAAGEFKGQGAMSFAPSTSGGYRPGYTSVSPGTIREQMHTYGELLASAEPVTARAL 425 Query: 399 ---SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 LG A AQ+ YI+++ GL++VD HAAHER+ +E+M+ + + +Q Sbjct: 426 PQTPTEDIPPLGYALAQLKGIYILAENAQGLIVVDMHAAHERITYERMKAAYAHGGLQTQ 485 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL PE I + E E + + LG + +R GP + IR++P IL++ QL+RD Sbjct: 486 PLLVPESIAVSEKEADCAEQFADIFKTLGFELQRAGPETLLIRQLPVILNRAQAEQLVRD 545 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 ++ ++I+ T+ +Q I ILATMAC+GS+R+ RK+ EMN LLR+ME S QCNH Sbjct: 546 VLSDLIEHGTSERIQHHINEILATMACHGSVRANRKLTIPEMNALLRDMEATERSGQCNH 605 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRPT+ L +++KLF R Sbjct: 606 GRPTWFLQSLDELDKLFMR 624 >gi|254787458|ref|YP_003074887.1| DNA mismatch repair protein [Teredinibacter turnerae T7901] gi|237684748|gb|ACR12012.1| DNA mismatch repair protein MutL [Teredinibacter turnerae T7901] Length = 613 Score = 576 bits (1485), Expect = e-162, Method: Composition-based stats. Identities = 218/609 (35%), Positives = 346/609 (56%), Gaps = 16/609 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI LS ++ NQIAAGE++ERP+ IKEL+ENSLDA +++++ + GG ++ DNG Sbjct: 3 KIFTLSPRLANQIAAGEVVERPASVIKELVENSLDAGATQLDVEVEQGGVKLIRVRDNGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++P+A+ RH TSKI DD + T GFRGEAL SI +V+ L L S + +G Sbjct: 63 GISKEDLPLALSRHATSKIINLDDLEAVVTLGFRGEALASISSVARLRLTSNTGEEESGW 122 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + G + + P GT VEVRDLFF PAR FL++E+ E + DV++R+A++ Sbjct: 123 CVEAEGRDMEARLAPAGHPQGTSVEVRDLFFNTPARRKFLRTERTEYGRVEDVLKRLALS 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 F+ + +T R++Q+ G F+ NAV ++ + L G+ Sbjct: 183 RFAQGFSLKNNGRVVHSWRPATTQPEQERRVAQICGPAFMENAVHVDIDRAGLRLWGWVA 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ + ++NGR ++DK + IR AY + + GR+P VL LE+DP VDVN Sbjct: 243 LPTFSRSQADLQHFYVNGRAIRDKLVSHAIRQAYQDVLYHGRHPAFVLYLELDPGNVDVN 302 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VHP K +RFR+ ++ +F+ +S+ KA+ + G S+ + + + + + P Sbjct: 303 VHPTKHEVRFRDSRLVHDFLFRSLHKALADVRPGNEPSAQEDIGAEADTASELSAQQYSP 362 Query: 357 KYATSLT---NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY--------Q 405 L+ E + E S + S S+ + Sbjct: 363 TEQPGLSFSAQRSEPSAVAERAPSWSPTYTSAGSATSKRPSMGSPASVMPPASDNETVPP 422 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 LG A AQ+ YI+++ DG+V+VD HAAHER+ +E+M++ + KI SQ LL P+ + + Sbjct: 423 LGYAVAQLKGIYILAENADGMVVVDMHAAHERITYERMKEQQQAQKIQSQPLLVPQAMAV 482 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 E E E + LG + ER GP ++ IR++P IL++ N+ QL+RD++ ++I+ + Sbjct: 483 SEKEADYADEFADIFVNLGFELERAGPESLLIRQLPVILNRANVEQLVRDVLSDLIEYGS 542 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 + +Q I IL TMAC+GS+R+ R++ EMN LLR+ME S QCNHGRPT+ ++ L Sbjct: 543 SQRIQQNINEILGTMACHGSVRANRRLNIAEMNALLRDMEATERSGQCNHGRPTWTQMSL 602 Query: 586 SDIEKLFGR 594 ++++KLF R Sbjct: 603 AELDKLFMR 611 >gi|23015547|ref|ZP_00055320.1| COG0323: DNA mismatch repair enzyme (predicted ATPase) [Magnetospirillum magnetotacticum MS-1] Length = 600 Score = 576 bits (1485), Expect = e-162, Method: Composition-based stats. Identities = 250/601 (41%), Positives = 372/601 (61%), Gaps = 9/601 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++NQIAAGE++ERP+ A+KEL+EN++DA ++R++ V+A GG+S ++D+G Sbjct: 1 MSIRLLPPTLVNQIAAGEVVERPASAVKELVENAIDAGATRIDVVLAEGGQSLIAVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +E+ +AV+RH TSK+ DD I+ GFRGEALPSIG+V+ LTL SRP + Sbjct: 61 CGMAPDEMMLAVERHATSKLPDDDLVRINFLGFRGEALPSIGSVARLTLTSRPRGAESAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G P A GT +EVRDLF+ PARL FLK+ + E DVI R+ +A+ Sbjct: 121 SLSVEGGVKGRPVPAAHPFGTRIEVRDLFYATPARLKFLKAARTELAHACDVIERLGMAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPE--RISQVIGEDFINNAVELNEKSNEITLQGYT 237 P ++F+ S + + RI+QV+G +F NA+ L+ + + L G+ Sbjct: 181 PGIAFSLSDGGRKVLDLAAKRGEPEAARLARIAQVVGREFEPNALALDALRDGVRLTGWA 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+PT+NR + Y+++NGR V+D+ ++ +R AY + + R+PVV L L+++P QVDV Sbjct: 241 GLPTYNRATSAAQYLYVNGRPVKDRLVIGAVRGAYQDVLARDRHPVVALFLDLEPDQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT---- 353 NVHPAK+ +RFR+ ++R I+ +I+ A+ G SS L+ + + + P + Sbjct: 301 NVHPAKAEVRFRDSGLVRGLIVGAIRHALAGAGHRASSTLTGVALGALGSPSQPPSSFFG 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 H P SL + + Q L D P + + E T Y LG A AQ+ Sbjct: 361 HHPPPRPSLPLVRAAIEAQSPFGLAEQSLSLDLPPAAPVTET--EEFTTDYPLGAAKAQL 418 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H YI+++T DGLVIVDQHAAHERL+FE+++ ++ Q LL PE++DL E A + Sbjct: 419 HDTYIVAETKDGLVIVDQHAAHERLVFERLKLGLEDGRVARQGLLLPEVVDLGEAGAARV 478 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 E DL RLG+ E FGP A+ +RE+PA+L + ++ L+RD+ DE+ + + L++R+ Sbjct: 479 AERAPDLARLGLVVEPFGPGAVVVREVPALLGEGDVQGLVRDLADELAEWGASTALEERL 538 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 ++ ATMAC+GS+R+GR++ EMN LLR ME P S QCNHGRPT I L L+DIEKLFG Sbjct: 539 LHVCATMACHGSVRAGRRLGIPEMNALLRRMEATPLSGQCNHGRPTHISLSLADIEKLFG 598 Query: 594 R 594 R Sbjct: 599 R 599 >gi|120555682|ref|YP_960033.1| DNA mismatch repair protein [Marinobacter aquaeolei VT8] gi|120325531|gb|ABM19846.1| DNA mismatch repair protein MutL [Marinobacter aquaeolei VT8] Length = 629 Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 220/629 (34%), Positives = 352/629 (55%), Gaps = 37/629 (5%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I+ LS ++ NQIAAGE++ERP+ +KEL+EN+LDA +SRV+ I GG ++ D+ Sbjct: 1 MPHIQLLSPRLANQIAAGEVVERPASVVKELVENALDAGASRVDVEIEQGGAKLIRVRDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++P+A+ RH TSKI DD + + GFRGEAL SI +VS LTL SR Sbjct: 61 GSGIEEADLPLALSRHATSKILTLDDLEAVASLGFRGEALASISSVSRLTLTSRTELQEA 120 Query: 118 GAQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 A++ + G + + P A GT VEVRDLFF PAR FL++E+ E N + + +RR A Sbjct: 121 AARVEVEGRDMDARISPAAHPVGTTVEVRDLFFNTPARRKFLRTEKTEFNHVEECVRRQA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + FT + + T+ + RI + G+ FI+NAV ++ ++ + L G+ Sbjct: 181 LGRFDTGFTLRHNQRVVQSLRPAETDLDKERRIGSLCGQQFIDNAVVIDAEATGLRLWGW 240 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 +PTF+R A+ Y F+NGR ++DK + +R AY + + R+P VL LE+DP VD Sbjct: 241 VALPTFSRSQADLQYFFVNGRVIRDKLVAHAVRQAYRDVLYNNRHPAFVLYLEVDPATVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-------- 348 VNVHP K +RFR+ ++ +FI +++ +A+ + L SF ++ Sbjct: 301 VNVHPTKHEVRFRDGRLVHDFIFRTLHRALA--DVRPDDHLRGAAAQSFGRESAVVEPEH 358 Query: 349 -------------NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS----------D 385 ++ Y +S + ++ + ++++ L Sbjct: 359 SAGGFSAPGTSGPWPTQSRTEAYPSSPGQSPQQEWRASDQMAFYQSLNEGGGVSTPVARA 418 Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 + + + +A LG A AQ+H YI++Q+ GL++VD HAAHER+ +E+M++ Sbjct: 419 EMPAASASVTPPRDDAEEPPLGYAIAQLHGIYILAQSRAGLIVVDMHAAHERITYERMKR 478 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 + SQ LL P + + + E AL H E+L +LG++ ER GP +A+R+IPA+L Sbjct: 479 ALVEQDLKSQPLLVPLSLAVSQKEAALAESHGEELQQLGLQIERIGPETLAVRQIPALLR 538 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 + QL+RD++ ++I+ + ++ +L TMAC+GS+R+ R++ EMN LLR+ME Sbjct: 539 GADTEQLVRDVLADLIEHGQSDRVEAVTHELLGTMACHGSVRANRQLTIPEMNSLLRDME 598 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ + LS+++KLF R Sbjct: 599 ATERSGQCNHGRPTWTLVTLSELDKLFLR 627 >gi|331005105|ref|ZP_08328508.1| DNA mismatch repair protein MutL [gamma proteobacterium IMCC1989] gi|330421074|gb|EGG95337.1| DNA mismatch repair protein MutL [gamma proteobacterium IMCC1989] Length = 619 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 215/617 (34%), Positives = 341/617 (55%), Gaps = 26/617 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L ++ NQIAAGE++ERP+ IKE++ENSLDA +SR++ I GG +I DNG Sbjct: 3 KIKLLPPRLANQIAAGEVVERPASVIKEMLENSLDAGASRIDIDIENGGIKTMRIRDNGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ RH TSKI DD + T GFRGEAL S+ +VS LTL S + G Sbjct: 63 GIDQDDLALALSRHATSKIYVLDDLEAVGTLGFRGEALASVSSVSRLTLTSSVNDSAQGW 122 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 G+++S+ P GT VEVRDLFF PAR FL++E+ E N I +V++R+A+A Sbjct: 123 AAKAEGQEMSTELTPAPHQQGTTVEVRDLFFNTPARRKFLRTEKTEFNRIEEVVKRLALA 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F + + + ++ R++Q+ G F+ NA+ ++ + + + L G+ Sbjct: 183 NFDVTFELRHNQRTIHSLRAGTSEAEKNRRVAQICGPAFMENALTVDIERSGLRLWGWVA 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ + ++NGR ++D+ + ++ AY++ + GR+P VL LEIDP VDVN Sbjct: 243 LPTFSRSQADLQHFYVNGRAIKDRLVSHAVKQAYSDVLYHGRHPAFVLYLEIDPATVDVN 302 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI---------------------STSSVL 337 VHP K +RFR+ + +FI S+ A+ +++ Sbjct: 303 VHPTKHEVRFRDGRNVHSFIYSSLHHALADVRPDDQLTTASSLAVAAGIGTDASQQQTIV 362 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 ++ +S P A S ++ + L S + Sbjct: 363 DQQSMSLAASTLVNTAGNPSPAYSSAPHYPPTDTDTPQI--REALNFYGQAASLSPESAT 420 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E+ LG A AQ+ YI+S+ GL++VD HAAHER+++E+M+ F+ + +Q L Sbjct: 421 ETSHEVPPLGYAIAQLKGIYILSENAQGLIVVDMHAAHERVVYERMKSAFDQGNVQAQPL 480 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P+ + + E E A I H E +LG E GP ++ IR+IP L N+ QL+RD++ Sbjct: 481 LVPQTLAVSEKEVACIESHQEVFQQLGFVVETAGPESLLIRQIPVSLKNANVEQLVRDVL 540 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 ++I ++ ++ I +L+TMAC+GS+R+ R + EMN LLR+ME S QCNHGR Sbjct: 541 SDLIQYGSSDRIKQHINELLSTMACHGSVRANRTLSVPEMNALLRDMEATERSGQCNHGR 600 Query: 578 PTFIKLKLSDIEKLFGR 594 PT++ L++I+K F R Sbjct: 601 PTWMHFSLAEIDKWFMR 617 >gi|119474825|ref|ZP_01615178.1| DNA mismatch repair protein [marine gamma proteobacterium HTCC2143] gi|119451028|gb|EAW32261.1| DNA mismatch repair protein [marine gamma proteobacterium HTCC2143] Length = 617 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 214/613 (34%), Positives = 341/613 (55%), Gaps = 20/613 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++LS ++ NQIAAGE++ERP+ IKEL+ENS+DA +SR++ I GG ++ DNG Sbjct: 3 QIKRLSPRLANQIAAGEVVERPASVIKELVENSMDAGASRIDIDIEAGGVKLMRVRDNGV 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A+ RH TSKI DD N+ T GFRGEAL SI +VS LT+MS + G Sbjct: 63 GIEQEDMPLALSRHATSKIIELDDLENVRTLGFRGEALASISSVSRLTIMSNTEEQGAGW 122 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + G + V P GT VEVRDLFF PAR FL++E+ E N + +V++R +++ Sbjct: 123 KAQTEGRDMGVEVSPTPHLRGTSVEVRDLFFNTPARRKFLRTEKTEFNHLEEVVKRQSLS 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V F + + + ++ R++ V G F+ NA+ ++ ++ + L G+ Sbjct: 183 RFDVGFYLNHNGRAIHALKPCASQLERERRVASVCGPAFMQNALHIDTEAAGLKLWGWVA 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R ++ + F+NGR ++DK + +R AY + + GR+P VL LE++P VDVN Sbjct: 243 LPTFSRSQSDLQHFFVNGRVIRDKLVTHAVRQAYRDVLFHGRHPAFVLYLEVNPSIVDVN 302 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINK--------KGISTSSVLSKKMISSFHQDNA 350 VHP K +RFR+ + +F+ +S+ + + + S+ + I++ Sbjct: 303 VHPTKHEVRFRDGRTVHDFLFRSLHRLLAEVRPEDQLAPASINSAEGQQGGIAAGEFQQQ 362 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS---------EDNDPVEESEA 401 T Q +E + L + S + + Sbjct: 363 QTIAWRADTTPQRPGQSPASFREQAAGYSALYGRGENVGSHGRSAGALGSGATMAPQEDG 422 Query: 402 THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 LG A AQ+ YI+++ GLV+VD HAAHER+ +E+M+ I SQ LL PE Sbjct: 423 EVPPLGYAIAQLKGIYILAEGEHGLVLVDMHAAHERITYERMKTARQGVGIQSQPLLVPE 482 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 + + + E E LG+ ER GP ++ +REIP IL N+ QL+RD++ ++I Sbjct: 483 SMAVSQREADCAEESSNVFRDLGVGIERAGPESLVVREIPVILQDSNVEQLVRDVLSDLI 542 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 + ++ ++ I+ IL+TMAC+GS+R+ R++ EMN LLR+ME+ S QCNHGRPT+ Sbjct: 543 EHGSSDRIEAHIDEILSTMACHGSVRANRRLTIPEMNALLRDMEETERSGQCNHGRPTWT 602 Query: 582 KLKLSDIEKLFGR 594 +L L ++++LF R Sbjct: 603 QLSLDELDRLFMR 615 >gi|330501621|ref|YP_004378490.1| DNA mismatch repair protein [Pseudomonas mendocina NK-01] gi|328915907|gb|AEB56738.1| DNA mismatch repair protein [Pseudomonas mendocina NK-01] Length = 623 Score = 575 bits (1481), Expect = e-161, Method: Composition-based stats. Identities = 209/619 (33%), Positives = 337/619 (54%), Gaps = 26/619 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ KEL+ENSLD+ + R++ + GG ++ D+G Sbjct: 3 RIHLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDVEVEQGGVKLLKVRDDGG 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++P+A+ RH TSKI + D + + GFRGEAL SI +VS LTL SR + Sbjct: 63 GIAAGDLPLALARHATSKIRELEDLEAVLSMGFRGEALASISSVSRLTLTSRTADADQAW 122 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + +P A GT VEVRDLFF PAR FL++E+ E + + +VI+R+A+A Sbjct: 123 QVETEGRDMEPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALA 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V F + ++ + + R++ V G F+ A+ + + + L G+ G Sbjct: 183 RFDVGFHLRHNGKTVFSLHEAADEISRARRVASVCGPAFLEQALPIEIERGGLRLWGWVG 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y ++NGR V+DK + +R AY + + GR+P VL LEIDP VDVN Sbjct: 243 LPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEIDPATVDVN 302 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ----------- 347 VHP K +RFR+ ++ +F+ ++ +A+ + Sbjct: 303 VHPTKHEVRFRDSRMVHDFLYGTLHRALADVRPEDQVAAPAAVSPMLRPTGLAAGEFGPQ 362 Query: 348 ----------DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY--SEDNDP 395 + P + + Q+ + + + + + Sbjct: 363 GEMGLAASVLETPVAIPQPAWRGAGAGYQQPVGNPGVPAAEAQAAYREYFSPLPTAQAQS 422 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 V + + LG A AQ+ YI+++ G+V+VD HAAHER+ +E+++Q S + Q Sbjct: 423 VPQEQGDIPPLGYAVAQLKGVYILAENAQGMVVVDMHAAHERITYERLKQAMASEGLRGQ 482 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL PE I L + E EH E RLG + +R G ++AIR+IPA+L + QL+RD Sbjct: 483 PLLVPESIALSQREADCAEEHGEWFQRLGFELQRLGEESVAIRQIPALLKQAEATQLVRD 542 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 ++ ++++ T+ +Q + +LATMAC+G++R+ R++ EMN LLR+ME+ S QCNH Sbjct: 543 VLADLLEYGTSDRIQAHLNELLATMACHGAVRANRRLTIPEMNGLLRDMEQTERSGQCNH 602 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRPT+ +L + ++KLF R Sbjct: 603 GRPTWTQLSMDQLDKLFMR 621 >gi|154250749|ref|YP_001411573.1| DNA mismatch repair protein [Parvibaculum lavamentivorans DS-1] gi|154154699|gb|ABS61916.1| DNA mismatch repair protein MutL [Parvibaculum lavamentivorans DS-1] Length = 602 Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats. Identities = 245/601 (40%), Positives = 392/601 (65%), Gaps = 10/601 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+LSE IN+IAAGE++ERP+ A+KEL+EN+LDA + ++ VI GGG+ ++TD+G Sbjct: 3 RIRRLSEGTINRIAAGEVVERPASAVKELVENALDAGARHIDIVIDGGGRDLIRVTDDGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS------DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN 115 GM +EE+ +AV+RH TSK+ +D +I T GFRGEALPSIGAV+ L+++SR Sbjct: 63 GMNAEELALAVERHATSKLRIDAGGQEDLHDIATLGFRGEALPSIGAVARLSIVSRTRDA 122 Query: 116 NTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 ++ +I++ G +++ V P + GT +EVRDLF+ PARL F+KSE+ ET ++DV++R+ Sbjct: 123 DSAERISVEGGRVTDVEPASGRAGTQIEVRDLFYATPARLKFMKSERAETLAVSDVVKRL 182 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 A+A+P+V FT ++ + N ++ + + R+ ++G DF NA+ ++ EI L Sbjct: 183 AMAHPEVGFTLTSAERNLLRLEPELPGDAGRLMRLGAIMGRDFAENAIAIDAMREEIGLA 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G+ G+PT+NRG A Y+F+NGR V+DK ++ +R AYA+ + R+P V L + IDPR Sbjct: 243 GFAGLPTYNRGTAQMQYLFVNGRPVRDKLLVGAVRGAYADFLARDRHPAVALFVTIDPRD 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAK+ +RFR+ ++R I+ ++++A+ + G S+ ++ + + + A + Sbjct: 303 VDVNVHPAKAEVRFRDAGLVRGLIVGALKRALAEAGHRASTTVAGATLDALRPEMAAAS- 361 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE-ATHYQLGIACAQI 413 P Y + F +E + + P +E A + LG+A Q+ Sbjct: 362 -PAYTGTWRPEPRPGFAEERGAWQGAFAGLAAQSARVEPLPESGAETAAGFALGVARGQL 420 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H+ Y+I+QT DG+VIVDQHAAHERL++E+M++ + ++ Q LL PE+++L E E + Sbjct: 421 HETYVIAQTADGIVIVDQHAAHERLVYERMKKAMAAQGVSRQMLLIPEVVELDEAEAERL 480 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 +L LG E FG A+ +RE+P+I K ++ L+RD+ D++ + +L++++ Sbjct: 481 AARVGELAELGFVLEAFGTGAVVVREVPSIFGKLDVQALVRDLADDLTELDEALSLKEKL 540 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E + T+AC+GS+R+GR++ + EMN LLREME P+S QCNHGRPT+++LKLSDIE+LFG Sbjct: 541 EEVCGTIACHGSVRAGRRLTAEEMNALLREMEATPHSGQCNHGRPTYVELKLSDIERLFG 600 Query: 594 R 594 R Sbjct: 601 R 601 >gi|89094654|ref|ZP_01167591.1| DNA mismatch repair protein [Oceanospirillum sp. MED92] gi|89081124|gb|EAR60359.1| DNA mismatch repair protein [Oceanospirillum sp. MED92] Length = 627 Score = 574 bits (1479), Expect = e-161, Method: Composition-based stats. Identities = 214/623 (34%), Positives = 349/623 (56%), Gaps = 30/623 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKE++ENSLDA +++V+ + GG +I DNGF Sbjct: 3 RIHLLSPRLANQIAAGEVVERPASVIKEILENSLDAGANKVDVDVEQGGVKLMRIRDNGF 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+A+ RH TSKI+ +D + + GFRGEAL SI +VS LTL SR + Sbjct: 63 GIEKDDLPLALSRHATSKITLLEDLEAVGSLGFRGEALASISSVSRLTLTSRQADQDNAW 122 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + + P A GT VEV+DLFF PAR FLK+E+ E + +V++R+A++ Sbjct: 123 QVQTEGRDMEAQLEPAAHPTGTTVEVKDLFFNTPARRKFLKTEKTEFRHLDEVVKRLALS 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE--KSNEITLQGY 236 V+F ++++ + R++ + G FI+NAV+ + +++ + L G+ Sbjct: 183 RFDVAFQLRHNGKVIHQLHQADSELEQERRVASICGSAFIDNAVKADVIAEASGLRLWGW 242 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 G+PTF+R A+ Y F+NGR ++DK + +R AYA+ + GR+P VL LE+DP VD Sbjct: 243 VGLPTFSRSQADLQYFFVNGRMIRDKVVTHAVRQAYADVLYHGRHPAYVLYLELDPALVD 302 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHP K +RFR ++ +F+ +++ + I ++ +S + + Sbjct: 303 VNVHPTKHEVRFRESRLVHDFLFRTLHRLIADMRPQDQMASPEQAEASVNLQPQVQPVQQ 362 Query: 357 KYATSLTNTQEKLFLQEN-------------------------RLSTNDLLPSDDPTYSE 391 Y + + N ++S L S Sbjct: 363 NYEQNRIAFSSAQNVSGNAGFNSSVRGGGYTPPSAPSGGQIREQISGYAALHPQSDVQSV 422 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 ++ E+ T +G A AQ+H YI+++ GLV+VD HAAHER+++E+M+Q + Sbjct: 423 SDNTAEQGSETCPPMGYAIAQLHGVYILAENEQGLVVVDMHAAHERIVYERMKQSYEQDV 482 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + SQ LL P + + E E E RLG + R G + +R++P L+K N+ Q Sbjct: 483 VRSQPLLVPLSLAVSAREADCAEEQAETFKRLGFELARMGEETLVVRQVPVSLAKGNVEQ 542 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 L+RD++ +++ + ++ I +LATMAC+G++R+ R++ EMN LLR+ME+ S Sbjct: 543 LIRDVLSDMLVYGESKRVEQHINELLATMACHGAVRANRQLTIPEMNALLRDMEQTERSG 602 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+ ++ +SD++KLF R Sbjct: 603 QCNHGRPTWSQMSMSDLDKLFMR 625 >gi|319787568|ref|YP_004147043.1| DNA mismatch repair protein MutL [Pseudoxanthomonas suwonensis 11-1] gi|317466080|gb|ADV27812.1| DNA mismatch repair protein MutL [Pseudoxanthomonas suwonensis 11-1] Length = 617 Score = 573 bits (1478), Expect = e-161, Method: Composition-based stats. Identities = 214/617 (34%), Positives = 346/617 (56%), Gaps = 25/617 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L + +INQIAAGE++ERP+ +KEL+EN+LDA ++RV+ + GG +I D+G Sbjct: 1 MPIRPLPDTLINQIAAGEVVERPASVVKELVENALDAGATRVDIDLEEGGIRLIRIRDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+P+A+ RH TSKI+ DD + T GFRGEALPSI +VS L SRP G Sbjct: 61 GGIPPEELPLAISRHATSKIASLDDLEAVATLGFRGEALPSIASVSRFMLASRPRDAEHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 A + + G ++ + P A PGT VEVR+LF+ +PAR FL++E+ E I + +R +A+A Sbjct: 121 AALHVDGGRVGEIVPKAHAPGTTVEVRELFYNVPARRKFLRAERTELGHIEEWLRSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V S + + + R+ + +GEDF +A+ ++ + L G+ Sbjct: 181 RPDVELRVSHNGKPSRRYRA--GDLDAAARLGETLGEDFARSALRIDHSGAGLRLHGWIA 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R +A+Q Y+++NGR V+D+ + ++ AY + + GR P VL LE+DP +VDVN Sbjct: 239 QPHYSRASADQQYLYVNGRAVRDRSVAHAVKLAYQDVLYHGRQPAYVLFLELDPTRVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------KGISTSSVL 337 VHPAK +RFR+ +I +F+ +++Q+A+ + S S+ Sbjct: 299 VHPAKHEVRFRDARLIHDFVFRTLQEALAQTRAGVETGVAASAMPGQAPMGWQPSASAAP 358 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 S + + P T P+ + + N S P + + Sbjct: 359 SPLDNGAGARPFVPWTPAPQPLGLRVDEAAGAYAALYGEPGNSSGASAMPVLPRQDMALP 418 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E++ LG A AQ+H YI+++ +GLV+VD HAAHER+ +E+++ + + +Q L Sbjct: 419 EAQGEVPPLGYAIAQLHGIYILAENAEGLVVVDMHAAHERIGYERLKTAHDGIGLRAQPL 478 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P + + E + + E L +LG + R GP +A+R +PA+L+ + LLRD++ Sbjct: 479 LVPLSLAVGERDADVAERESETLVQLGFEVTRSGPQTLAVRSVPALLAHADPEALLRDVL 538 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 ++ + T + + +L+TMAC+G++R+ R++ EMN LLR+ME S QCNHGR Sbjct: 539 ADLREHGATRRVAAARDELLSTMACHGAVRANRRLTIPEMNALLRDMEATERSGQCNHGR 598 Query: 578 PTFIKLKLSDIEKLFGR 594 PT+ + L +I++ F R Sbjct: 599 PTWARFSLGEIDRWFLR 615 >gi|254281638|ref|ZP_04956606.1| DNA mismatch repair protein MutL [gamma proteobacterium NOR51-B] gi|219677841|gb|EED34190.1| DNA mismatch repair protein MutL [gamma proteobacterium NOR51-B] Length = 605 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 213/601 (35%), Positives = 342/601 (56%), Gaps = 8/601 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L +I NQIAAGE+++RP+ +KE +ENSLDA + R++ I GG ++ D+G Sbjct: 3 RIRSLDPRIANQIAAGEVVDRPASVVKEALENSLDAGARRIDIDIEAGGSQLIRVRDDGL 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G+ +++ +A++RH TSKIS +D + T GFRGEAL SI +VS +TL S + + G Sbjct: 63 GIGRDDLTLALERHATSKISTIEDLEAVATLGFRGEALASIASVSRMTLTSNASDSVSDG 122 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G +S RP GT +EVRDLF+ PAR FL++E+ E I +V+RR A+ Sbjct: 123 CCAVAEGRDMSVTLRPAPHPRGTSLEVRDLFYNTPARRKFLRTEKTEFGHIDEVVRRQAL 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +G R+S V GE F+ V + ++ + LQG+ Sbjct: 183 SRSDVSFTLRHNNKVVRSLPAADDDGLLLRRLSGVCGEAFMAQCVSIEREAGALMLQGWV 242 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+PTF+R A+ Y F+NGR ++DK + I+ AY + + GR+P VL L + P +VDV Sbjct: 243 GLPTFSRSQADLQYFFVNGRVIRDKLVSHAIKQAYRDVLFHGRHPAYVLFLSLPPARVDV 302 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI-SSFHQDNAPKTHLP 356 NVHP K +RFR+ + +F+ ++ +A+ S+ I ++ AP+ Sbjct: 303 NVHPTKHEVRFRDGREVHSFLFSTLHRALADIRPGESAPSVAPDIVAALSSGAAPQQAAM 362 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES---EATHYQLGIACAQI 413 T E + Q++ LS P + E E LG A AQ+ Sbjct: 363 HIPTPAAVDPELVAAQQSALSALYARPMPAADRGALPSSIAEPDSGEEEVPPLGFALAQL 422 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 YI+++ G+V+VD HAAHER+ +E+++Q + I Q LL P+ + + E ++ Sbjct: 423 SGVYILAENAHGMVLVDMHAAHERITYERLKQRSADSGIRRQPLLVPQTLAVSPREARMV 482 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 EH L +G+ + G + +RE+PA+L+ N+ QL+RD++ ++++ ++ ++ Sbjct: 483 AEHQALLLEMGLVIDGVGEEQVVLRELPAVLAGSNVDQLVRDVLSDLVEYGSSERIRGHF 542 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 +++L+TMAC+GSIR+ R++ EMN LLR+ME S QCNHGRPT+++L L++++KLF Sbjct: 543 DDVLSTMACHGSIRANRRLTITEMNALLRDMEHTERSGQCNHGRPTWVQLTLAELDKLFL 602 Query: 594 R 594 R Sbjct: 603 R 603 >gi|254448141|ref|ZP_05061604.1| 2-polyprenylphenol 6-hydroxylase [gamma proteobacterium HTCC5015] gi|198262267|gb|EDY86549.1| 2-polyprenylphenol 6-hydroxylase [gamma proteobacterium HTCC5015] Length = 615 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 204/614 (33%), Positives = 344/614 (56%), Gaps = 21/614 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+I++L K+INQIAAGE+IERP+ +KEL+ENS+DA ++ V + GG +I DNG Sbjct: 1 MRIQRLPNKLINQIAAGEVIERPASVVKELLENSIDAGATEVHIDLEQGGLKRIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM EEIPMA++RH TSKI +D ++ + GFRGEALPS+ +VSHLT+ S G Sbjct: 61 CGMNREEIPMALERHATSKIGSLEDLESVRSMGFRGEALPSMASVSHLTVTSCAEGEEHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ + +++P A + GT +E+RDLFF +PAR F+++E+ E +++R+A+ Sbjct: 121 WCVSPET-EGGAMKPAAHSQGTTIELRDLFFNVPARRKFMRTERTEYKHTETLVKRIALG 179 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P + T ++ +R++++ G F+ + + ++ + LQG+ G Sbjct: 180 APYLGLTLRHNGKVTCQLRPAGNRAEMEKRVAELCGSAFMEQCLYVEHEAAGLKLQGWVG 239 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y ++NGR V+DK + ++ Y + + GR+P VL LE+DP+ VDVN Sbjct: 240 LPTFSRSQADLQYFYVNGRIVRDKLVTHAVKQGYQDVLYHGRHPAYVLHLELDPKLVDVN 299 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAIN-------KKGISTSSVLSKKMISSFH---QD 348 HP K +RFR+ ++ +F+ +++ + + + G + + + + Sbjct: 300 AHPTKYEVRFRDGQLVHSFLFRTLHQVLADTRAGSYEGGAAQRDDIHRAGQGAEQGGLDA 359 Query: 349 NAPKTHLPKYATSLTNTQE--------KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 + + +P + + + + + P T S N V Sbjct: 360 FSTQAAMPLRVSDGEMASNAGLGAGAIPSDSRNGSVGGSVIPPEYYRTASSPNPDVVAET 419 Query: 401 ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 + LG A AQ+H Y+++Q GL+IVD HAAHER+ +EK++ + I +Q LL P Sbjct: 420 EQQHPLGYALAQLHGLYVLAQNQSGLIIVDTHAAHERVTYEKLKAAYEQQGIQTQPLLVP 479 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 I++ E E + EH + +LG + R P A+ IR++P +L++ + L+RD++ ++ Sbjct: 480 VSINVSEAEADMAEEHAAEFLKLGFELSRSAPEALRIRQVPVLLNQADAEALVRDVLSDL 539 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + +++ + +L+TMAC+GS+R+ R + EMN LLREME S QCNHGRPT+ Sbjct: 540 TAHGHSERIREALNEVLSTMACHGSVRANRLLTLPEMNALLREMEATERSGQCNHGRPTW 599 Query: 581 IKLKLSDIEKLFGR 594 +L + ++KLF R Sbjct: 600 TQLTVDQLDKLFMR 613 >gi|83313515|ref|YP_423779.1| DNA mismatch repair protein [Magnetospirillum magneticum AMB-1] gi|123767885|sp|Q2VYV5|MUTL_MAGMM RecName: Full=DNA mismatch repair protein mutL gi|82948356|dbj|BAE53220.1| DNA mismatch repair enzyme [Magnetospirillum magneticum AMB-1] Length = 607 Score = 571 bits (1472), Expect = e-160, Method: Composition-based stats. Identities = 253/608 (41%), Positives = 371/608 (61%), Gaps = 16/608 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++NQIAAGE++ERP+ A+KEL+EN++DA +SR++ V+A GG+S ++D+G Sbjct: 1 MSIRLLPPTLVNQIAAGEVVERPASAVKELVENAIDAGASRIDVVLAEGGQSLIAVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ +E+ +AV+RH TSK+ DD I GFRGEALPSIG+V+ LTL SRP ++ Sbjct: 61 CGMSPDEMMLAVERHATSKLPDDDLVRIRFLGFRGEALPSIGSVARLTLTSRPRGADSAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G P A GT +EVRDLF+ PARL FLK+ + E DVI R+ +A+ Sbjct: 121 SLSVEGGAKGRPVPAAHPQGTRIEVRDLFYATPARLKFLKAARTELTHAADVIERLGMAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTN--GNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P ++F+ S + + RI+QV+G +F NA+ L+ + + + L G+ Sbjct: 181 PDIAFSLSDGGRKVLDLAAKRGEPGAALLSRIAQVVGREFEPNALALDAERDGVRLTGWA 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+PT+NR + Y+F+NGR V+D+ ++ +R AY + + R+PVV L LE+DP QVDV Sbjct: 241 GLPTYNRATSAAQYLFVNGRPVKDRLVIGAVRGAYQDVLARDRHPVVALFLELDPDQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF-----HQDNAPK 352 NVHPAK+ +RFR+ ++R I+ +I+ A+ G SS L+ + + + Sbjct: 301 NVHPAKAEVRFRDSGLVRGLIVGAIRHALAGAGHRASSTLTGVALGALGGGGGNSPPPSF 360 Query: 353 THLPKYATSLT------NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 H P SL Q L L E L + + P E S Y L Sbjct: 361 AHYPPPRPSLPLIRAGIGAQAPLGLAEQGLGLHLPPAAPVAPPEAREGPGEAS--VDYPL 418 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 G A AQ+H YI+++T DGLVIVDQHAAHERL+FE+++ ++ Q LL PE++DL Sbjct: 419 GAAKAQLHDTYIVAETADGLVIVDQHAAHERLVFERLKLGLTEGQVARQGLLLPEVVDLG 478 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 + A + E DL RLG+ + FGP A+ +RE+PA+L ++ L+RD+ DE+ + + Sbjct: 479 DAGAARVTERAGDLARLGLVIDSFGPGAVVVREVPALLGDDDVQGLVRDLADELAEWGAS 538 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 L++R+ +I ATMAC+GS+R+GR++ EMN LLR ME P S QCNHGRPT + L L+ Sbjct: 539 TVLEERLLHICATMACHGSVRAGRRLSVPEMNALLRRMEATPLSGQCNHGRPTHVSLSLN 598 Query: 587 DIEKLFGR 594 DIEKLFGR Sbjct: 599 DIEKLFGR 606 >gi|260432213|ref|ZP_05786184.1| DNA mismatch repair protein [Silicibacter lacuscaerulensis ITI-1157] gi|260416041|gb|EEX09300.1| DNA mismatch repair protein [Silicibacter lacuscaerulensis ITI-1157] Length = 618 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 259/604 (42%), Positives = 390/604 (64%), Gaps = 13/604 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E IN+IAAGE++ERP+ A+KEL+EN++DA ++R+ IA GGK+ ++TD+G G Sbjct: 15 IRQLDEAAINRIAAGEVVERPASAVKELVENAIDAGATRIAIDIADGGKTLIRVTDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + E++P+A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR P AQI Sbjct: 75 IAPEDLPLALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLTITSRAPGAE-AAQI 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++G K+ V+P A+ GT+VE+RDLF+ PARL F+++++ E I+D ++R+A+A P Sbjct: 134 RVAGGKMEPVKPAALRAGTVVELRDLFYATPARLKFMRTDRAEAQAISDTVKRLAMAEPS 193 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQ 234 ++FT S R NG+ + R+++++G +F NA+ ++ I L Sbjct: 194 ITFTLRDVSGGGEGRVVFRADRENGDLFDALHARLARILGREFAENALRIDATREGIRLY 253 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG A ++F+NGR V+DK + +R AY + + R+P L ++ +P Sbjct: 254 GYAALPTYSRGAAVAQFLFVNGRPVRDKMLTGALRAAYFDFLSRDRHPAAALFIDCEPTL 313 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAKS +RFR+P + R I+ S++ A+ + G S+ ++ + + + AP Sbjct: 314 VDVNVHPAKSEVRFRDPGVARGLIVSSLRHALAEAGHRASTTVANATLGAMRPEPAPVAP 373 Query: 355 LPKYATSLTNTQEKLFLQENRLS-TNDLLPSDDPTYSED---NDPVEESEATHYQLGIAC 410 Y + + + + DL + + E +++ H LG A Sbjct: 374 ARVYQMDRPSPAARAMAYQAQAPGFADLANAYSGSVVEPVAEPAQPDQTPPEHLPLGAAR 433 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 Q+H+NYII+QT DG+VIVDQHAAHERL++EK+++ + +Q LL PEI++L EG+C Sbjct: 434 GQVHENYIIAQTADGMVIVDQHAAHERLVYEKLKKQMAENGVAAQALLIPEIVELSEGDC 493 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 A ++ +DL RLG+ E FG A+A+RE PAIL + N ++ DI+DE+ D + T+Q Sbjct: 494 ARLIAVADDLSRLGLTIEPFGGGAVAVRETPAILGEVNARAMILDILDELADQGESQTVQ 553 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 RIE IL+ +AC+GS+RSGR+M++ EMN LLREME P+S QCNHGRPT+++LKLSDIE+ Sbjct: 554 ARIEAILSRVACHGSVRSGRRMRAEEMNALLREMEATPHSGQCNHGRPTYVELKLSDIER 613 Query: 591 LFGR 594 LFGR Sbjct: 614 LFGR 617 >gi|90022314|ref|YP_528141.1| DNA mismatch repair protein [Saccharophagus degradans 2-40] gi|89951914|gb|ABD81929.1| DNA mismatch repair protein MutL [Saccharophagus degradans 2-40] Length = 630 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 219/628 (34%), Positives = 348/628 (55%), Gaps = 34/628 (5%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I+KLS ++ NQIAAGE++ERP+ IKEL+ENS+DA + +++ I GG ++ DN Sbjct: 1 MPEIKKLSPRLANQIAAGEVVERPASVIKELVENSVDAGAKQLDVEIENGGVKLMRVRDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++P+A+ RH TSKI DD + T GFRGEAL SI +V+ L L S Q +T Sbjct: 61 GCGIGKNDLPLALSRHATSKIYHLDDLEAVGTLGFRGEALASISSVARLKLTSNDGQQDT 120 Query: 118 GAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G + + P A GT VEVRDLFF PAR FL++E+ E + I D+++R+A Sbjct: 121 AWCAQAEGRDMEAELSPAAHPQGTTVEVRDLFFNTPARRKFLRTEKTEYSRIEDILKRIA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 ++ ++ F+ + ++ R++Q+ G F+ NAV ++ + L G+ Sbjct: 181 LSRFELGFSLKNNGKVVHNWRPANSLAEQERRVAQICGPAFMENAVHVDINRTGLRLWGW 240 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 +PTF+R A+ + ++NGR ++D+ + ++ AY + + GR+P VL LE+DP VD Sbjct: 241 VALPTFSRSQADLQHFYVNGRAIKDRLVAHAVKQAYQDVLYHGRHPAYVLYLELDPANVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHP K +RFR+ ++ +F+ S+ KA+ S ++ + S Sbjct: 301 VNVHPTKHEVRFRDGRLVHDFLFSSLHKALADVRPSAEQPVTYQQPSIASLSQQQPVQSA 360 Query: 344 ---------------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 S+H + ++ N E++ N S + T Sbjct: 361 LGLAGTSNAASNGAGSYHSSSTANYSTAYSPANVGNVSEQITQYANLTSPTGSPSNLQYT 420 Query: 389 YSEDN--DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 S + ++E A LG A AQ+ YI+++ +GL++VD HAAHER+ +E+++Q Sbjct: 421 NSSQTPVNNLQEDNAEIPPLGYAIAQLKGIYILAENANGLIVVDMHAAHERITYERLKQQ 480 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 F+ ++ SQ LL P + + E E AL E RLG E GP I IR++P IL++ Sbjct: 481 FDHEQLASQPLLVPLSMAVSEKEAALAEESASLFARLGFTVETAGPETILIRQVPVILNR 540 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 + L+RD++ ++I+ T+ ++ I IL+TMAC+GS+R+ RK+ EMN LLR+ME Sbjct: 541 ATVEDLVRDVLADVIEYGTSSRIEHNINEILSTMACHGSVRANRKLTIPEMNSLLRDMEA 600 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L+ ++KLF R Sbjct: 601 TERSGQCNHGRPTWSQMTLAQLDKLFMR 628 >gi|110632802|ref|YP_673010.1| DNA mismatch repair protein [Mesorhizobium sp. BNC1] gi|123162815|sp|Q11L80|MUTL_MESSB RecName: Full=DNA mismatch repair protein mutL gi|110283786|gb|ABG61845.1| DNA mismatch repair protein MutL [Chelativorans sp. BNC1] Length = 620 Score = 570 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 276/619 (44%), Positives = 391/619 (63%), Gaps = 25/619 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L++ IINQIAAGE+IERP+ +KEL+EN+LDA + R+E AGGG + ++ D+G Sbjct: 1 MPIRALADIIINQIAAGEVIERPASVVKELVENALDAGAKRIEVATAGGGLNLIRVIDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ EE+P+AV RHCTSK++ D +I T GFRGEALPSIG+V LTL SR P + GA+ Sbjct: 61 GGIPPEELPLAVARHCTSKLTSDIHDIRTLGFRGEALPSIGSVGRLTLRSRTPDADGGAE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G K S+V+PVA N GT VEVRDLFF PARL F+KSE+ E IT+V++R+A+A+P Sbjct: 121 ITVDGGKASAVKPVAANRGTTVEVRDLFFATPARLKFMKSERAEAAAITEVVKRIALAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V F S ++ S +G+ R+ Q+IG+DF NA+ ++ + + L GY I Sbjct: 181 AVRFMLSGTDRTSTELPAVSADGDGLLRRLGQIIGKDFAENALPIDAEREGVFLTGYASI 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+F RGNA + ++NGR V+DK I IR AY + +P R+ V L + +DP VDVNV Sbjct: 241 PSFTRGNALAQFAYVNGRPVRDKLIAGAIRGAYMDALPRDRHAVTALFISLDPALVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK------- 352 HPAK+ +RFR+P ++R I+ +I++A+ G+ ++ + M+ +F P Sbjct: 301 HPAKADVRFRDPGLVRGLIVGAIRQALEGAGVRAATTGAAAMLQAFRVPEGPSRANGAND 360 Query: 353 --------THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE------ 398 T P+ S+ + + + N + + + + Sbjct: 361 FTGRPFSGTERPRGGWSMELSPSRPLEDAFPPAANGFAEAQQVVFDIGSVVSADARAGTL 420 Query: 399 ---SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 S+ LG A AQ+H+NYI++QT D LVIVDQHAAHERL++E ++ +S + SQ Sbjct: 421 EALSDLVGRPLGAARAQVHENYIVAQTEDSLVIVDQHAAHERLVYEALKDAIHSKPLPSQ 480 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL PEI+DL E + + H E L RLG ERFGP AI +RE P++L + +I L+RD Sbjct: 481 MLLMPEIVDLPEEDAERLCAHAEFLARLGFGVERFGPGAICVRETPSMLGEVDIAALIRD 540 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 + DEI D+ T +L+ RI++I ATMAC+GSIRSGR+++ EMN LLR+ME P S CNH Sbjct: 541 LADEIADNDTANSLKKRIDHIAATMACHGSIRSGRRLKPEEMNALLRQMEATPGSGTCNH 600 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRPT+I+LKL+DIE+LFGR Sbjct: 601 GRPTYIELKLADIERLFGR 619 >gi|116250684|ref|YP_766522.1| DNA mismatch repair protein [Rhizobium leguminosarum bv. viciae 3841] gi|123384931|sp|Q1MKU7|MUTL_RHIL3 RecName: Full=DNA mismatch repair protein mutL gi|115255332|emb|CAK06407.1| putative DNA mismatch repair protein [Rhizobium leguminosarum bv. viciae 3841] Length = 600 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 301/601 (50%), Positives = 412/601 (68%), Gaps = 9/601 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+LSE +INQIAAGE+IERP+ A KELIEN+LDA ++R+E +GGGK+ +++DNG Sbjct: 1 MAIRQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEIATSGGGKALLRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM + ++ +AV+RHCTSKIS+ +I T GFRGEALPSIG+V+ L++ SR + G + Sbjct: 61 SGMDAADLELAVRRHCTSKISETLEDIRTLGFRGEALPSIGSVARLSIASRRRDSAGGHE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 IA++G KI+ +RP A NPGTIVEVRDLFF PARL FLK+E+ E IT++++RMAIA+P Sbjct: 121 IAVAGGKIAHLRPAAANPGTIVEVRDLFFATPARLKFLKTEKAEAGAITEIVKRMAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F S S+R + F +T + R++QV+G++F +NA+ L+ EI L G+ G+P Sbjct: 181 AVRFVLS--GSDRTTLEFPATGDDHLGRMAQVLGKEFRDNAIALDAVREEIALTGFAGVP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGN+ Y F+NGR VQDK ILS IR AYAETIP GRYPV VL + +DP VDVNVH Sbjct: 239 TFNRGNSAHQYAFVNGRPVQDKLILSAIRGAYAETIPSGRYPVAVLSITLDPALVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAKS +RFR+P ++R I+ +I++A+ + G ++ + M+ SF P + P+ A Sbjct: 299 PAKSDVRFRDPGLVRGLIVGAIREALARDGSRAATTGASDMLRSFRPGFPPNSQRPQTAW 358 Query: 361 SLTNTQEKL------FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL-GIACAQI 413 S + + F + + S + L + + +E G A AQI Sbjct: 359 SAETSSSRPYQPATGFGERPQASFDGLSMPTARAEPQFSPQPAAAEPNARYPLGAARAQI 418 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H NYI++QT DGLVIVDQHAAHERL+FE MR+ +S ++ SQ LL PEI+D+ E +C + Sbjct: 419 HANYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHSKRLASQVLLIPEIVDIPEEDCDRL 478 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 M+H +L LG+ ERFGP AIA+RE PA+L + + L+R + DEI + T L ++ Sbjct: 479 MQHAAELSELGLAIERFGPGAIAVRETPAMLGEVDAHGLIRQLADEIAEWDTASGLSAKL 538 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E + ATMAC+GS+RSGR+++ EMN LLREME P S QCNHGRPT+I+LKLSDIE+LFG Sbjct: 539 EYVAATMACHGSVRSGRRLRPEEMNALLREMEVTPGSGQCNHGRPTYIELKLSDIERLFG 598 Query: 594 R 594 R Sbjct: 599 R 599 >gi|241203286|ref|YP_002974382.1| DNA mismatch repair protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857176|gb|ACS54843.1| DNA mismatch repair protein MutL [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 600 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 301/601 (50%), Positives = 412/601 (68%), Gaps = 9/601 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+LSE +INQIAAGE+IERP+ A KELIEN+LDA ++R+E +GGGK+ +++DNG Sbjct: 1 MAIRQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEIATSGGGKALLRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM + ++ +AV+RHCTSKIS+ +I T GFRGEALPSIG+V+ L++ SR + G + Sbjct: 61 SGMDAADLELAVRRHCTSKISETLEDIRTLGFRGEALPSIGSVARLSIASRRRDSTGGHE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 IA++G KI+ +RP A NPGTIVEVRDLFF PARL FLK+E+ E IT++++RMAIA+P Sbjct: 121 IAVAGGKIAHMRPAAANPGTIVEVRDLFFATPARLKFLKTEKAEAGAITEIVKRMAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F S S+R + F +T + R++QV+G++F +NA+ L+ EI L G+ G+P Sbjct: 181 AVRFVLS--GSDRTTLEFPATGDDHLARMAQVLGKEFRDNAIALDAVREEIALTGFAGVP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGN+ Y F+NGR VQDK ILS IR AYAETIP GRYPV VL + +DP VDVNVH Sbjct: 239 TFNRGNSAHQYAFVNGRPVQDKLILSAIRGAYAETIPSGRYPVAVLAITLDPALVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAKS +RFR+P+++R I+ +I++A+ + G ++ + M+ SF P P+ A Sbjct: 299 PAKSDVRFRDPSLVRGLIVGAIREALARDGSRAATTGASDMLRSFRPGFQPNNQRPQTAW 358 Query: 361 SLTNTQEKL------FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL-GIACAQI 413 S + + F + + S + L + + +E G A AQI Sbjct: 359 SAETSPSQPYQPATGFGERPQASFDGLSMPTARAEPQFSPQPAVAEPNTRYPLGAARAQI 418 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H NYI++QT DGLVIVDQHAAHERL+FE MR+ +S ++ SQ LL PEI+D+ E +C + Sbjct: 419 HANYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHSKRLASQVLLIPEIVDIPEEDCDRL 478 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 M+H +L LG+ ERFGP AIA+RE PA+L + + L+R + DEI + T L ++ Sbjct: 479 MQHAAELSELGLAIERFGPGAIAVRETPAMLGEVDAHGLIRQLADEIAEWDTASGLSAKL 538 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E + ATMAC+GS+RSGR+++ EMN LLREME P S QCNHGRPT+I+LKLSDIE+LFG Sbjct: 539 EYVAATMACHGSVRSGRRLRPEEMNALLREMEVTPGSGQCNHGRPTYIELKLSDIERLFG 598 Query: 594 R 594 R Sbjct: 599 R 599 >gi|149377526|ref|ZP_01895267.1| DNA mismatch repair protein MutL [Marinobacter algicola DG893] gi|149358218|gb|EDM46699.1| DNA mismatch repair protein MutL [Marinobacter algicola DG893] Length = 636 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 215/634 (33%), Positives = 349/634 (55%), Gaps = 40/634 (6%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M IR L+ ++ NQIAAGE++ERP+ +KEL+EN+LDA + RV+ + GG ++ D+ Sbjct: 1 MPSIRLLTPRLANQIAAGEVVERPASVVKELVENALDAGARRVDIEVEQGGVKLIRVRDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++P+A+ RH TSKI +D + + GFRGEAL SI +VS L L SR + Sbjct: 61 GMGIDETDLPLALSRHATSKIENLEDLEAVASLGFRGEALASISSVSRLALTSRTERQEA 120 Query: 118 GAQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 +++ + G + S+ P A GT VEVRDLFF PAR FL++E+ E N + + IRR A Sbjct: 121 ASRVEVEGRDMDASISPAAHPVGTTVEVRDLFFNTPARRKFLRTEKTEFNHVEECIRRQA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 ++ FT + + + RI + G+ FI+NAV ++ ++ + L G+ Sbjct: 181 LSRFDTGFTLRHNQRVVQSLRPAENPLDRERRIGSLCGQQFIDNAVVIDAEATGLKLWGW 240 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 +PTF+R A+ Y F+NGR ++D+ + +R AY + + R+P VL LE+DP VD Sbjct: 241 VALPTFSRSQADLQYFFVNGRVIRDRLVAHAVRQAYRDVLYNNRHPAFVLYLEVDPANVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK--------------KGISTSSVLSKKMI 342 VNVHP K +RFR+ ++ +FI +++ KA+ G + + Sbjct: 301 VNVHPTKHEVRFRDGRLVHDFIFRTLHKALADVRPDDHLKGAVAQSHGREAGTATGGFGV 360 Query: 343 SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED---------- 392 + + +A S ++ F R S ++ D + + Sbjct: 361 QAAMPGVNHQPASEPFADSGGSSPHAGFSGAPRPSQHEWQARDQMAFYQSLNGGGGTGAQ 420 Query: 393 ------------NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 + + LG A AQ+H YI++Q+ G+++VD HAAHER+ + Sbjct: 421 PAMADSGDLAVAAPTPPQDSSDEPPLGYAIAQLHGIYILAQSRQGMIVVDMHAAHERITY 480 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 E+M++ + + SQ LL P + + + E AL H E+L +LG++ ER GP +A+R++ Sbjct: 481 ERMKRALEAQDLKSQPLLVPVSLAVSQKEAALAETHSEELLQLGLRVERIGPETLAVRQV 540 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 PA+L + QL+RD++ ++I++ + ++ I +L TMAC+GS+R+ R++ EMN L Sbjct: 541 PALLRGADTEQLVRDVLSDLIENGESDRVEAVIHELLGTMACHGSVRANRQLTIPEMNTL 600 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LR+ME S QCNHGRPT+ + LS+++KLF R Sbjct: 601 LRDMEATERSGQCNHGRPTWTVVTLSELDKLFLR 634 >gi|229588073|ref|YP_002870192.1| DNA mismatch repair protein [Pseudomonas fluorescens SBW25] gi|259511148|sp|C3KDW1|MUTL_PSEFS RecName: Full=DNA mismatch repair protein mutL gi|229359939|emb|CAY46793.1| DNA mismatch repair protein [Pseudomonas fluorescens SBW25] Length = 633 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 213/628 (33%), Positives = 346/628 (55%), Gaps = 37/628 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENS+D+ + R++ + GG ++ D+G Sbjct: 6 RIELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVEQGGVKLLRVRDDGS 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 66 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 125 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+R+A+A Sbjct: 126 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + R+S + G F+ A+ + + N + L G+ G Sbjct: 186 RFDVAFHLRHNGKTILSLHEAHDDAARARRVSAICGAGFLEQALPIEIERNGLRLWGWVG 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 246 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPSVVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT----- 353 VHP K +RFR+ ++ +F+ ++ + + + LS ++++ + + P+ Sbjct: 306 VHPTKHEVRFRDGRMVHDFLYGTLHRTLG--DVRPDDQLSAPIVTAVVRPSGPEAGEFGP 363 Query: 354 -----------HLPKYATSLT----------------NTQEKLFLQENRLSTNDLLPSDD 386 P+ S T Q + + E + + + Sbjct: 364 QGEMSLAANLLQSPQPQPSYTAPGSGSGAGYQYQYTPRPQSAVPVAEAQAAYREFFAPLP 423 Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 + E LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ Sbjct: 424 GAEPGAPVALPEGGGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIA 483 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 S ++ Q LL PE + + + E EH +LG + +R GP +AIR+IPA+L + Sbjct: 484 MASEGLSGQPLLVPESLAVSQREADCAEEHHSVFQKLGFELQRLGPETLAIRQIPALLKQ 543 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 +L+ D++ ++++ T+ +Q I +L TMAC+G+IR+ R++ EMN LLR+ME Sbjct: 544 AEANRLVADVLADLMEYGTSDRIQAHINELLGTMACHGAIRANRRLALPEMNGLLRDMEN 603 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L D++KLF R Sbjct: 604 TERSGQCNHGRPTWTQMGLDDLDKLFLR 631 >gi|220934074|ref|YP_002512973.1| DNA mismatch repair protein MutL [Thioalkalivibrio sp. HL-EbGR7] gi|219995384|gb|ACL71986.1| DNA mismatch repair protein MutL [Thioalkalivibrio sp. HL-EbGR7] Length = 611 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 204/595 (34%), Positives = 340/595 (57%), Gaps = 7/595 (1%) Query: 7 SEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSE 66 ++INQIAAGE++ERP+ +KEL+ENSLDA + R++ + GG +I D+G G+ + Sbjct: 15 PPQLINQIAAGEVVERPASVVKELLENSLDAGARRIQVDVEQGGVRRIRIRDDGTGIPPD 74 Query: 67 EIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAIS 124 E+ +A+ RH TSKI+ +D + + GFRGEALPSI +VS LTL S P+ ++G I Sbjct: 75 ELSLALSRHATSKIASLEDLERVASLGFRGEALPSIASVSRLTLTSATPEADSGWTIQGD 134 Query: 125 G-EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 G ++ + P A GT V+V+DLFF +PAR FL++E+ E + +V+RR+A++ V Sbjct: 135 GGDRFEAPMPAAHPQGTTVDVKDLFFNVPARRKFLRAERTEFGHLEEVVRRIALSRFGVG 194 Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFN 243 F + + ++ S +R++ + GE F AV ++ ++ + L G+ G+PT++ Sbjct: 195 FELTHNQKPGLRLPPASDEAGQLDRVAAICGEAFATQAVRIDHEAAGLRLSGWLGLPTYS 254 Query: 244 RGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAK 303 R A+ Y ++NGR V+D+ I +R AY + + GR+P VL LE+DP VDVN HPAK Sbjct: 255 RSQADLQYFYVNGRMVRDRLISHAVRQAYQDVLFHGRHPAFVLYLELDPALVDVNAHPAK 314 Query: 304 SYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLT 363 +RFR ++ +F+ +S+ + + + + ++ + Sbjct: 315 HEVRFRESRLVHDFLFRSLHRVLAELRPGQAVAPARLETPGREPAAESRAGGDWGGAGWR 374 Query: 364 NTQEKLFLQ-ENRLSTNDLLPSDDPTYSEDNDPV---EESEATHYQLGIACAQIHQNYII 419 +Q L L+ + T L + + PV E LG A AQ+H YI+ Sbjct: 375 PSQSGLGLRVAEVMETYASLHTPAAPAAMPMSPVMAFERQAEELPPLGYALAQLHGVYIL 434 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 +Q +GLV+VD HAAHER+ +E++++ + + SQ LL P +++ E + E Sbjct: 435 AQNAEGLVLVDMHAAHERITYERLKRGYWGEGLKSQPLLVPATLNVSAREADRVETDAEA 494 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 R G + ER GP + +R +P +L++ + L+RD++ +++ + +++ + +LA Sbjct: 495 FSRFGFELERIGPEQLRVRAVPTLLARADTETLVRDVLADLLAHGESSRVEETVNELLAG 554 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MAC+GS+R+ R++ EMN LLR+ME S QCNHGRPT+++L + ++KLF R Sbjct: 555 MACHGSVRANRQLTVPEMNALLRDMEATERSGQCNHGRPTWVQLSMGQLDKLFMR 609 >gi|152988751|ref|YP_001350994.1| DNA mismatch repair protein [Pseudomonas aeruginosa PA7] gi|166232101|sp|A6VD59|MUTL_PSEA7 RecName: Full=DNA mismatch repair protein mutL gi|150963909|gb|ABR85934.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa PA7] Length = 633 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 210/628 (33%), Positives = 334/628 (53%), Gaps = 37/628 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LS ++ NQIAAGE++ERP+ KEL+ENSLDA + R++ + GG ++ D+G Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGARRIDVEVEQGGVKLLRVRDDGR 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI +V+ LT+ SR Sbjct: 66 GIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAW 125 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + +P A GT VEVRDLFF PAR FL++E+ E + + +VI+R+A+A Sbjct: 126 QVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F + ++ R+ V G+ F+ A+ + + N + L G+ G Sbjct: 186 RFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIEVERNGLHLWGWVG 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R + Y ++NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 246 LPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPTFVLFFEVDPAVVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K +RFR+ ++ +F+ ++ +A+ + + L+ +S + ++ Sbjct: 306 VHPTKHEVRFRDSRMVHDFLYGTLHRALGE--VRPDDQLAPPGATSLTEPRPTGAAAGEF 363 Query: 359 ATS--------------------------------LTNTQEKLFLQENRLSTNDLLPSDD 386 T+ + Sbjct: 364 GPQGEMRLAESVLESPAARVGWSGGASSSGASSGYSAYTRPEAPPSLAEAGGAYKAYFAP 423 Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 E + ES LG A AQ+ YI+++ GLV+VD HAAHER+ +E+++ Sbjct: 424 LPAGEAPAALPESAQDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERITYERLKVA 483 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 S + Q LL PE I + E E EH RLG + +R GP +AIR+IPA+L + Sbjct: 484 MASEGLRGQPLLVPESIAVSEREADCAEEHSGWFQRLGFELQRLGPETLAIRQIPALLKQ 543 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 QL+RD+I ++++ T+ +Q + +L TMAC+G++R+ R++ EMN LLR+ME Sbjct: 544 AEATQLVRDVIADLLEYGTSDRIQAHLNELLGTMACHGAVRANRRLTLPEMNALLRDMEI 603 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ +L L +++KLF R Sbjct: 604 TERSGQCNHGRPTWTQLGLDELDKLFLR 631 >gi|107104045|ref|ZP_01367963.1| hypothetical protein PaerPA_01005118 [Pseudomonas aeruginosa PACS2] gi|116053095|ref|YP_793414.1| DNA mismatch repair protein [Pseudomonas aeruginosa UCBPP-PA14] gi|313109947|ref|ZP_07795875.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa 39016] gi|122256892|sp|Q02F72|MUTL_PSEAB RecName: Full=DNA mismatch repair protein mutL gi|115588316|gb|ABJ14331.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa UCBPP-PA14] gi|310882377|gb|EFQ40971.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa 39016] Length = 633 Score = 568 bits (1463), Expect = e-159, Method: Composition-based stats. Identities = 211/628 (33%), Positives = 335/628 (53%), Gaps = 37/628 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LS ++ NQIAAGE++ERP+ KEL+ENSLDA S R++ + GG ++ D+G Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGSRRIDVEVEQGGIKLLRVRDDGR 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI +V+ LT+ SR Sbjct: 66 GIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAW 125 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + +P A GT VEVRDLFF PAR FL++E+ E + + +VI+R+A+A Sbjct: 126 QVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F + ++ R+ V G+ F+ A+ + + N + L G+ G Sbjct: 186 RFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIEVERNGLHLWGWVG 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R + Y ++NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 246 LPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPTFVLFFEVDPAVVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K +RFR+ ++ +F+ ++ +A+ + + L+ +S + ++ Sbjct: 306 VHPTKHEVRFRDSRMVHDFLYGTLHRALGE--VRPDDQLAPPGATSLTEPRPTGAAAGEF 363 Query: 359 ATS--------------------------------LTNTQEKLFLQENRLSTNDLLPSDD 386 T+ + Sbjct: 364 GPQGEMRLAESVLESPAARVGWSGGSSASGGSSGYSAYTRPEAPPSLAEAGGAYKAYFAP 423 Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 E + ES LG A AQ+ YI+++ GLV+VD HAAHER+ +E+++ Sbjct: 424 LPAGEAPAALPESAQDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERITYERLKVA 483 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 S + Q LL PE I + E E EH RLG + +R GP ++AIR+IPA+L + Sbjct: 484 MASEGLRGQPLLVPESIAVSEREADCAEEHSSWFQRLGFELQRLGPESLAIRQIPALLKQ 543 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 QL+RD+I ++++ T+ +Q + +L TMAC+G++R+ R++ EMN LLR+ME Sbjct: 544 AEATQLVRDVIADLLEYGTSDRIQAHLNELLGTMACHGAVRANRRLTLPEMNALLRDMEI 603 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ +L L +++KLF R Sbjct: 604 TERSGQCNHGRPTWTQLGLDELDKLFLR 631 >gi|15600139|ref|NP_253633.1| DNA mismatch repair protein [Pseudomonas aeruginosa PAO1] gi|218894041|ref|YP_002442910.1| DNA mismatch repair protein [Pseudomonas aeruginosa LESB58] gi|254238339|ref|ZP_04931662.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa C3719] gi|20455148|sp|Q9HUL8|MUTL_PSEAE RecName: Full=DNA mismatch repair protein mutL gi|226723040|sp|B7V209|MUTL_PSEA8 RecName: Full=DNA mismatch repair protein mutL gi|9951226|gb|AAG08331.1|AE004907_9 DNA mismatch repair protein MutL [Pseudomonas aeruginosa PAO1] gi|126170270|gb|EAZ55781.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa C3719] gi|218774269|emb|CAW30086.1| DNA mismatch repair protein MutL [Pseudomonas aeruginosa LESB58] Length = 633 Score = 568 bits (1463), Expect = e-159, Method: Composition-based stats. Identities = 211/628 (33%), Positives = 335/628 (53%), Gaps = 37/628 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LS ++ NQIAAGE++ERP+ KEL+ENSLDA S R++ + GG ++ D+G Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGSRRIDVEVEQGGIKLLRVRDDGR 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI +V+ LT+ SR Sbjct: 66 GIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAW 125 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + +P A GT VEVRDLFF PAR FL++E+ E + + +VI+R+A+A Sbjct: 126 QVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F + ++ R+ V G+ F+ A+ + + N + L G+ G Sbjct: 186 RFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIEVERNGLHLWGWVG 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R + Y ++NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 246 LPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPTFVLFFEVDPAVVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K +RFR+ ++ +F+ ++ +A+ + + L+ +S + ++ Sbjct: 306 VHPTKHEVRFRDSRMVHDFLYGTLHRALGE--VRPDDQLAPPGATSLTEPRPTGAAAGEF 363 Query: 359 ATS--------------------------------LTNTQEKLFLQENRLSTNDLLPSDD 386 T+ + Sbjct: 364 GPQGEMRLAESVLESPAARVGWSGGSSASGGSSGYSAYTRPEAPPSLAEAGGAYKAYFAP 423 Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 E + ES LG A AQ+ YI+++ GLV+VD HAAHER+ +E+++ Sbjct: 424 LPAGEAPAALPESAQDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERITYERLKVA 483 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 S + Q LL PE I + E E EH RLG + +R GP ++AIR+IPA+L + Sbjct: 484 MASEGLRGQPLLVPESIAVSEREADCAEEHSSWFQRLGFELQRLGPESLAIRQIPALLKQ 543 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 QL+RD+I ++++ T+ +Q + +L TMAC+G++R+ R++ EMN LLR+ME Sbjct: 544 AEATQLVRDVIADLLEYGTSDRIQAHLNELLGTMACHGAVRANRRLTLPEMNALLRDMEI 603 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ +L L +++KLF R Sbjct: 604 TERSGQCNHGRPTWTQLGLDELDKLFLR 631 >gi|296391786|ref|ZP_06881261.1| DNA mismatch repair protein [Pseudomonas aeruginosa PAb1] Length = 633 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 215/626 (34%), Positives = 343/626 (54%), Gaps = 33/626 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LS ++ NQIAAGE++ERP+ KEL+ENSLDA S R++ + GG ++ D+G Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGSRRIDVEVEQGGIKLLRVRDDGR 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI +V+ LT+ SR Sbjct: 66 GIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASISSVARLTMTSRTADAGEAW 125 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + +P A GT VEVRDLFF PAR FL++E+ E + + +VI+R+A+A Sbjct: 126 QVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRAEKTEFDHLQEVIKRLALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F + ++ R+ V G+ F+ A+ + + N + L G+ G Sbjct: 186 RFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIEVERNGLHLWGWVG 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R + Y ++NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 246 LPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPTFVLFFEVDPAVVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI-------STSSVLSKKMISSFHQDNAP 351 VHP K +RFR+ ++ +F+ ++ +A+ + +S+ + + + P Sbjct: 306 VHPTKHEVRFRDSRMVHDFLYGTLHRALGEVRPDDQLAPPGATSLTEPRPTGAAAGEFGP 365 Query: 352 KTHLPKYATSLTNTQEKL--------------FLQENRLSTNDLLPSDDPTYSEDNDPVE 397 + + + L + ++ + R T L Y P+ Sbjct: 366 QGEMRLAESVLESPAARVGWSGGSSASGGSSGYSAYTRPETPPSLAEAGGAYKAYFAPLP 425 Query: 398 ---------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 ES LG A AQ+ YI+++ GLV+VD HAAHER+ +E+++ Sbjct: 426 AGEAPAALPESAQDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERITYERLKVAMA 485 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 S + Q LL PE I + E E EH RLG + +R GP ++AIR+IPA+L + Sbjct: 486 SEGLRGQPLLVPESIAVSEREADCAEEHSSWFQRLGFELQRLGPESLAIRQIPALLKQAE 545 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 QL+RD+I ++++ T+ +Q + +L TMAC+G++R+ R++ EMN LLR+ME Sbjct: 546 ATQLVRDVIADLLEYGTSDRIQAHLNELLGTMACHGAVRANRRLTLPEMNALLRDMEITE 605 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ +L L +++KLF R Sbjct: 606 RSGQCNHGRPTWTQLGLDELDKLFLR 631 >gi|182682515|ref|YP_001830675.1| DNA mismatch repair protein [Xylella fastidiosa M23] gi|32129762|sp|Q87AC9|MUTL_XYLFT RecName: Full=DNA mismatch repair protein mutL gi|238691108|sp|B2I9E6|MUTL_XYLF2 RecName: Full=DNA mismatch repair protein mutL gi|182632625|gb|ACB93401.1| DNA mismatch repair protein MutL [Xylella fastidiosa M23] gi|307578792|gb|ADN62761.1| DNA mismatch repair protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 619 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 217/619 (35%), Positives = 346/619 (55%), Gaps = 27/619 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +INQIAAGE++ERP+ +KEL+EN++DA ++RV+ + G +I DNG Sbjct: 1 MPIRQLPEILINQIAAGEVVERPASVVKELVENAIDAGATRVDIELEAAGVRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM ++E+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TLMSR + G Sbjct: 61 HGMAAQELPLAVLRHATSKIASLDDLEAVATLGFRGEALPSIASVSRFTLMSRRATDEHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 A + I G + V P A PGT VEVR+LF+ +PAR FL++E+ E I + R +A+A Sbjct: 121 AVLQIEGGTLGEVIPHAHAPGTTVEVRELFYNVPARRKFLRAERTELGHIEEWARSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P + S + + + +++GEDF + A+ ++ + L G Sbjct: 181 HPDLELRLSHNGKLSRRYKPGDWYSDVR--LIEILGEDFAHQALRVDHSGAGLRLHGCIV 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R NA+Q Y+++NGR V+D+ + ++ AY++ + GR+P VL LE+DP +VDVN Sbjct: 239 QPHYSRLNADQQYLYVNGRPVRDRSVAHAVKQAYSDVLYQGRHPAYVLFLELDPARVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK +RFR+ +I +F+ +++Q + + T + P H + Sbjct: 299 VHPAKHEVRFRDARLIHDFVYRTVQGTLAQTRAGTPPLAVGVGDVEGEGARPPGRHAVSF 358 Query: 359 AT----------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL-- 406 + S + + L +S D + Y+ V ++ Sbjct: 359 SGRRGGASHVLGSYSASTAPLMQGVPSVSVADAPAAYAALYAAPPTQVMDAVPQMQTGLP 418 Query: 407 -----------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 G A AQ+H YI+++ DGL++VD HAAHER+ +E++++ + + +Q Sbjct: 419 LAAGAGDVPLLGYAIAQLHGIYILAECADGLIVVDMHAAHERIGYERLKRAHDGIGLRTQ 478 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P + + E E + E L LG + R GP ++ +R IPA+LS+ LLRD Sbjct: 479 PLLVPMTLMVAEREADVAECEAETLANLGFEVTRSGPGSLQVRSIPALLSQAEPEMLLRD 538 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 ++ ++ + T + + + +LATMAC+G++R+ R++ EMN LLR+ME S QCNH Sbjct: 539 VLSDLSEHGHTRRVAEARDTLLATMACHGAVRAHRRLSISEMNALLRDMEATERSGQCNH 598 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRPT+ + L++I++ F R Sbjct: 599 GRPTWARFSLAEIDRWFLR 617 >gi|28199765|ref|NP_780079.1| DNA mismatch repair protein [Xylella fastidiosa Temecula1] gi|28057886|gb|AAO29728.1| DNA mismatch repair protein MutL [Xylella fastidiosa Temecula1] Length = 621 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 217/619 (35%), Positives = 346/619 (55%), Gaps = 27/619 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +INQIAAGE++ERP+ +KEL+EN++DA ++RV+ + G +I DNG Sbjct: 3 MPIRQLPEILINQIAAGEVVERPASVVKELVENAIDAGATRVDIELEAAGVRLIRIRDNG 62 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM ++E+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TLMSR + G Sbjct: 63 HGMAAQELPLAVLRHATSKIASLDDLEAVATLGFRGEALPSIASVSRFTLMSRRATDEHG 122 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 A + I G + V P A PGT VEVR+LF+ +PAR FL++E+ E I + R +A+A Sbjct: 123 AVLQIEGGTLGEVIPHAHAPGTTVEVRELFYNVPARRKFLRAERTELGHIEEWARSLALA 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P + S + + + +++GEDF + A+ ++ + L G Sbjct: 183 HPDLELRLSHNGKLSRRYKPGDWYSDVR--LIEILGEDFAHQALRVDHSGAGLRLHGCIV 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R NA+Q Y+++NGR V+D+ + ++ AY++ + GR+P VL LE+DP +VDVN Sbjct: 241 QPHYSRLNADQQYLYVNGRPVRDRSVAHAVKQAYSDVLYQGRHPAYVLFLELDPARVDVN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK +RFR+ +I +F+ +++Q + + T + P H + Sbjct: 301 VHPAKHEVRFRDARLIHDFVYRTVQGTLAQTRAGTPPLAVGVGDVEGEGARPPGRHAVSF 360 Query: 359 AT----------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL-- 406 + S + + L +S D + Y+ V ++ Sbjct: 361 SGRRGGASHVLGSYSASTAPLMQGVPSVSVADAPAAYAALYAAPPTQVMDAVPQMQTGLP 420 Query: 407 -----------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 G A AQ+H YI+++ DGL++VD HAAHER+ +E++++ + + +Q Sbjct: 421 LAAGAGDVPLLGYAIAQLHGIYILAECADGLIVVDMHAAHERIGYERLKRAHDGIGLRTQ 480 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P + + E E + E L LG + R GP ++ +R IPA+LS+ LLRD Sbjct: 481 PLLVPMTLMVAEREADVAECEAETLANLGFEVTRSGPGSLQVRSIPALLSQAEPEMLLRD 540 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 ++ ++ + T + + + +LATMAC+G++R+ R++ EMN LLR+ME S QCNH Sbjct: 541 VLSDLSEHGHTRRVAEARDTLLATMACHGAVRAHRRLSISEMNALLRDMEATERSGQCNH 600 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRPT+ + L++I++ F R Sbjct: 601 GRPTWARFSLAEIDRWFLR 619 >gi|209548102|ref|YP_002280019.1| DNA mismatch repair protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238058936|sp|B5ZS00|MUTL_RHILW RecName: Full=DNA mismatch repair protein mutL gi|209533858|gb|ACI53793.1| DNA mismatch repair protein MutL [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 600 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 299/601 (49%), Positives = 412/601 (68%), Gaps = 9/601 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+LSE +INQIAAGE+IERP+ A KELIEN+LDA ++R+E AGGGK+ +++DNG Sbjct: 1 MAIRQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEIATAGGGKALLRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM + ++ +AV+RHCTSK+S+ +I T GFRGEALPSIG+V+ L++ SR + G + Sbjct: 61 SGMDAADLELAVRRHCTSKLSETLEDIRTLGFRGEALPSIGSVARLSIASRRRDSAGGHE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 IA++ K++ +RP A NPGTIVEVRDLFF PARL FLK+E+ E IT++++RMAIA+P Sbjct: 121 IAVNAGKVAHLRPAAANPGTIVEVRDLFFATPARLKFLKTEKAEAGAITEIVKRMAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F S S+R + F +T + R++QV+G+DF +NA+ L+ EI+L G+ G+P Sbjct: 181 AVRFVLS--GSDRTTLEFPATGDDHLARMAQVLGKDFRDNAIALDAVREEISLTGFAGVP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGN+ Y F+NGR VQDK ILS IR AYAETIP GR+PV VL + +DP VDVNVH Sbjct: 239 TFNRGNSAHQYAFVNGRPVQDKLILSAIRGAYAETIPSGRHPVAVLSITLDPALVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAKS +RFR+P ++R I+ +I++A+ + G ++ + M+ SF P+ P+ A Sbjct: 299 PAKSDVRFRDPGLVRGLIVGAIREALARDGSRAATTGASDMLRSFRPGFQPQAQRPQTAW 358 Query: 361 SLTNTQEKL------FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL-GIACAQI 413 S + + F + + S + L + ++ T G A AQI Sbjct: 359 SAETSPFRPYQPTTGFSERPQASFDGLSMPTARAEPPFSPQPAAADTTARYPLGAARAQI 418 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H NYI++QT DGLVIVDQHAAHERL+FE MR+ +S ++ SQ LL PEI+D+ E +C + Sbjct: 419 HANYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHSKRLASQVLLIPEIVDIPEEDCDRL 478 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 M+H +L LG+ ERFGP AIA+RE PA+L + + L+R + DEI + T L ++ Sbjct: 479 MQHAAELAELGLAIERFGPGAIAVRETPAMLGEVDAHGLIRQLADEIAEWDTASGLSAKL 538 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E + ATMAC+GS+RSGR+++ EMN LLREME P S QCNHGRPT+I+LKLSDIE+LFG Sbjct: 539 EYVAATMACHGSVRSGRRLRPEEMNALLREMEVTPGSGQCNHGRPTYIELKLSDIERLFG 598 Query: 594 R 594 R Sbjct: 599 R 599 >gi|226942900|ref|YP_002797973.1| DNA mismatch repair protein [Azotobacter vinelandii DJ] gi|259509928|sp|C1DLQ0|MUTL_AZOVD RecName: Full=DNA mismatch repair protein mutL gi|226717827|gb|ACO76998.1| DNA mismatch repair protein [Azotobacter vinelandii DJ] Length = 641 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 214/634 (33%), Positives = 341/634 (53%), Gaps = 41/634 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LS ++ NQIAAGE++ERP+ KEL+ENSLDA + RV+ + GG ++ D+G Sbjct: 6 RIQLLSLRLANQIAAGEVVERPASVAKELLENSLDAGARRVDIEVEQGGVKLLRVRDDGC 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++P+A+ RH TSKI +D + + GFRGEAL SIG+V+ LTL SR Sbjct: 66 GIAADDLPLALARHATSKIRELEDLERVASLGFRGEALASIGSVARLTLTSRTADAGQAW 125 Query: 120 QIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + V+P A GT VEVRDLFF PAR FL++E+ E + +V+RR+A+A Sbjct: 126 QVETEGRDMEARVQPAAYPVGTSVEVRDLFFNTPARRKFLRAEKTEFEHLQEVVRRLALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F + ++ R++ V G F+ A+ + + + L G+ G Sbjct: 186 RFDVAFHLRHNGRSALALHEAGDETARARRVAAVCGPAFLEQALPIEVERAGLRLWGWVG 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y ++NGR V+DK + +R AY + + GR+P VL LE+DP VDVN Sbjct: 246 LPTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLEVDPAVVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI-------------------------------- 326 VHP K +RFR+ +I +F+ ++ + + Sbjct: 306 VHPTKHEVRFRDSRMIHDFLYGTLHRVLGEVRPEDRLAAPAAVAPPAPASGAAAGEFRGQ 365 Query: 327 NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ------ENRLSTND 380 + +S + + + + P + + ++ + E R Sbjct: 366 EEMPLSATPPAREPARPAAWKGAGAGYQAPSPRPARSAEAGGVYREFFAPLAEPRTEPAT 425 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 + S D + S LG A AQ+ YI+++ GLV+VD HAAHER+ + Sbjct: 426 RTGEESGISSGDTSLGDTSPGGIPPLGYALAQLKGIYILAENAQGLVLVDMHAAHERITY 485 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 E+++ S + Q LL PE + L + E EH E RLG + +R GP +AIR+ Sbjct: 486 ERLKTAMASEGLRGQPLLVPEGLALSQREADCAEEHAEWFQRLGFELQRLGPETLAIRQT 545 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 PA+L + QL+RD++ ++++ ++ ++ + +LATMAC+GS+R+ R++ EMN L Sbjct: 546 PALLRQAEAGQLVRDVLADLLEYGSSDRIEAHLNELLATMACHGSVRANRRLTLPEMNAL 605 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LR+ME S QCNHGRPT+ +L ++D++KLF R Sbjct: 606 LRDMESTERSGQCNHGRPTWTQLGMADLDKLFLR 639 >gi|126666949|ref|ZP_01737925.1| DNA mismatch repair protein [Marinobacter sp. ELB17] gi|126628665|gb|EAZ99286.1| DNA mismatch repair protein [Marinobacter sp. ELB17] Length = 630 Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats. Identities = 212/630 (33%), Positives = 349/630 (55%), Gaps = 38/630 (6%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I L ++ NQIAAGE++ERP+ +KELIEN+LDA +SRV+ I GG ++ D+ Sbjct: 1 MPHIHLLPPRLANQIAAGEVVERPASVVKELIENALDAGASRVDVDIEQGGVKLIRVRDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +E++ +A+ RH TSKI+ DD + + GFRGEAL SI +VS L+L SR Sbjct: 61 GCGIAAEDLSLALSRHATSKITSLDDLEAVTSLGFRGEALASISSVSRLSLTSRTENQEA 120 Query: 118 GAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 +++ + G + + P A G+ VEVRDLFF PAR FL++E+ E + + +RR A Sbjct: 121 ASKVEVEGRDMDAHVSPAAHPVGSTVEVRDLFFNTPARRKFLRTEKTEFGHVEECVRRQA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 ++ F + + + + RI+ + G+ FI+NAV ++ ++ + L G+ Sbjct: 181 LSCFDTGFNLRHNQRAVQSLRPALSELDKERRIASLCGQQFIDNAVVISAEATGLKLWGW 240 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 +PTF+R + Y F+NGR ++D+ + +R AY + + R+ VL LE+DP VD Sbjct: 241 VALPTFSRSQTDLQYFFVNGRVIRDRLVAHAVRQAYRDVLYNNRHAAFVLYLEVDPGSVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA------ 350 VNVHP K +RFR+ ++ +F+ +++ KA+ + L + S ++NA Sbjct: 301 VNVHPTKHEVRFRDGRLVHDFLFRTLHKALA--DVRPDDHLRGAVAQSLGRENAFAAVTG 358 Query: 351 PKTHLPKYATSLTNT-------------------QEKLFLQENRLSTNDLLPSD------ 385 LP ++ + + + + ++L L + Sbjct: 359 SAEGLPSPGSAASESALGYPGGIERTPGQVTHSDPQHQWQASDQLGFYQALNAGGGVSAG 418 Query: 386 -DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 + + + E LG A AQ+H YI++Q+ GL++VD HAAHER+ +E+M+ Sbjct: 419 RQASVAAHPPQMLEDSEQEPPLGYAIAQLHGIYILAQSRTGLIMVDMHAAHERITYERMK 478 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 Q + SQ LL P + + + E L+ H ++L +LG+ ER GP +A+R+IPA+L Sbjct: 479 QALAQQDLKSQPLLVPLSLAVSQKEAGLVETHGDELQQLGLVIERIGPETLAVRQIPALL 538 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 + QL+RD++ ++I+ + +Q + +L TMAC+GS+R+ R++ EMN LLR+M Sbjct: 539 RGADGEQLVRDVLSDLIEHGQSDRVQAVTQELLGTMACHGSVRANRQLTIPEMNSLLRDM 598 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 E S QCNHGRPT+ + L++++KLF R Sbjct: 599 EATERSGQCNHGRPTWTVMTLAELDKLFLR 628 >gi|104783874|ref|YP_610372.1| DNA mismatch repair protein [Pseudomonas entomophila L48] gi|122985730|sp|Q1I447|MUTL_PSEE4 RecName: Full=DNA mismatch repair protein mutL gi|95112861|emb|CAK17589.1| DNA mismatch repair protein MutL [Pseudomonas entomophila L48] Length = 632 Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats. Identities = 215/625 (34%), Positives = 340/625 (54%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LS ++ NQIAAGE++ERP+ KEL+ENSLD+ + R+E + GG ++ DNG Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIEVEVEQGGVKLLRVRDNGG 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+A+ RH TSKI + D + + GFRGEAL SI +V+ LTL SR Sbjct: 66 GIAPDDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTADAGEAW 125 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VIRR+A+A Sbjct: 126 QVETEGRDMTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V F + ++ + R+ + G F+ A+ ++ + N + L G+ G Sbjct: 186 RFDVGFHLRHNGKTIFSLHEATDEMARARRVGTICGPGFLEQALPIDVERNGLRLWGWVG 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL LE DP VDVN Sbjct: 246 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLECDPTGVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK----------KMISSFHQD 348 VHP K +RFR ++ +F+ ++ +A+ + + F Sbjct: 306 VHPTKHEVRFREGRMVHDFLYGTLHRALADVRPEDQLAAPAAASEIVRPSGQQVGEFGPQ 365 Query: 349 NAPKTHLPKYATSLTNTQEKL-----------FLQENRLSTNDLLPSDDPTYSEDNDPVE 397 + P ++ + R S + Y E P++ Sbjct: 366 GEMRLASPVLEQPQAEPRQSFTPGSGAGSGYQYQYTPRPSQPLPVAETQAVYREFYAPLD 425 Query: 398 --------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 ES+ LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ S Sbjct: 426 GTAPASLPESQGDIPPLGYALAQLKGIYILAENAVGLVLVDMHAAHERIMYERLKVAMAS 485 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE + L + E EH + RLG + +R GP +AIR+IPA+L + Sbjct: 486 EGLSGQPLLVPESLALSQREADCAEEHAQWFQRLGFELQRLGPETVAIRQIPALLKQAEA 545 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L++D++ ++++ T+ +Q + +L TMAC+G++R+ R++ EMN LLR+ME Sbjct: 546 NRLVQDVLADLMEYGTSDRIQAHLNELLGTMACHGAVRANRRLAIPEMNALLRDMENTER 605 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L D++KLF R Sbjct: 606 SGQCNHGRPTWTQMGLDDLDKLFLR 630 >gi|71901139|ref|ZP_00683245.1| DNA mismatch repair protein [Xylella fastidiosa Ann-1] gi|71729103|gb|EAO31228.1| DNA mismatch repair protein [Xylella fastidiosa Ann-1] Length = 621 Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats. Identities = 219/621 (35%), Positives = 349/621 (56%), Gaps = 29/621 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +INQIAAGE++ERP+ +KEL+EN++DA ++RV+ + G +I DNG Sbjct: 1 MPIRQLPEILINQIAAGEVVERPASVVKELVENAIDAGATRVDIELEAAGVRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM ++E+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TLMSR + G Sbjct: 61 HGMAAQELPLAVLRHATSKIASLDDLEAVATLGFRGEALPSIASVSRFTLMSRRATDEHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 A + I G + V P A PGT VEVR+LF+ +PAR FL++E+ E I + R +A+A Sbjct: 121 AVLQIEGGTLGEVIPHAHAPGTTVEVRELFYNVPARRKFLRAERTELGHIEEWARSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P + S + + + +++GEDF + A+ ++ + L G Sbjct: 181 HPDLELRLSHNGKLSRRYKPGDWYSDAR--LIEILGEDFAHQALPVDHSGAGLRLHGCIV 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R NA+Q Y+++NGR V+D+ + ++ AY++ + GR+P VL LE+DP +VDVN Sbjct: 239 QPHYSRLNADQQYLYVNGRPVRDRSVAHAVKQAYSDVLYQGRHPAYVLFLELDPARVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKK--GISTSSVLSKKMISSFHQDNAPKTHLP 356 VHPAK +RFR+ +I +F+ +++Q + + G +V + P H Sbjct: 299 VHPAKHEVRFRDARLIHDFVYRTVQGTLAQTRAGTPPLAVGVGDVEGEGEGARPPGRHAV 358 Query: 357 KYAT----------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY-- 404 ++ S + + L +S D + Y+ V ++ Sbjct: 359 SFSGRRGGASHVLGSYSASTAPLMQGVPSVSVADAPAAYAALYAAPPTQVMDAVPQMQTG 418 Query: 405 -----------QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 LG A AQ+H YI+++ DGL++VD HAAHER+ +E++++ + + Sbjct: 419 LPLAAGAGDVPPLGYAIAQLHGIYILAECADGLIVVDMHAAHERIGYERLKRAHDGIGLR 478 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 +Q LL P + + E E + E L LG + R GP ++ +R IPA+LS+ LL Sbjct: 479 TQPLLVPMTLMVAEREADVAECEAETLANLGFEVTRSGPGSLQVRSIPALLSQAEPEMLL 538 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 RD++ ++ + T + + + +LATMAC+G++R+ R++ EMN LLR+ME S QC Sbjct: 539 RDVLSDLSEHGHTRRVAEARDTLLATMACHGAVRAHRRLSISEMNALLRDMEATERSGQC 598 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 NHGRPT+ + L++I++ F R Sbjct: 599 NHGRPTWARFSLAEIDRWFLR 619 >gi|34496797|ref|NP_901012.1| DNA mismatch repair protein [Chromobacterium violaceum ATCC 12472] gi|34102652|gb|AAQ59017.1| DNA mismatch repair protein [Chromobacterium violaceum ATCC 12472] Length = 631 Score = 566 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 211/631 (33%), Positives = 332/631 (52%), Gaps = 42/631 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++L + ++NQIAAGE++ERP+ A+KE++ENSLDA ++R+ +A GG ++TDNG Sbjct: 3 RIQRLPDHLVNQIAAGEVVERPASALKEMLENSLDAGATRISVDLAQGGIKLIRVTDNGA 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++P+A+ RH TSKI+ DD ++ T GFRGE L S+ +VS LTL SRP + Sbjct: 63 GIAADDLPLALDRHATSKIASLDDLESVSTLGFRGEGLASVASVSRLTLTSRPHDADHAH 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + V P A GT VEV DL+F PAR FLKSE E R+A+A+ Sbjct: 123 QIIAIDGTLHPVEPAAHPHGTSVEVVDLYFNTPARRKFLKSENTEYAHCAATFERIALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V F +++ QS +R++ ++G+DF+ A+ L+ ++ + L G+ Sbjct: 183 PEVEFLLRHNGKVAWRLPSQSA----EDRVAALLGKDFVAAAIPLDSQAGPLALSGFVAS 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT+++ + + Y ++NGR V+DK +R AY + + R+P L ++P VDVNV Sbjct: 239 PTYSKASRDAQYFYVNGRFVRDKTAQHALRQAYRDVLHHDRHPAYALFFTLEPSGVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-------KKMISSFHQDNAPK 352 HP K +RFR + F+ S+ KA+ + + + Sbjct: 299 HPTKIEVRFRESQAVHQFLFHSVHKALAGTSAGAAPTVQVEGAETAAPQLPRGESAPLFA 358 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTN-------------DLLPSDDPTYSEDND----- 394 + P+ A+S + Q+ + N L ++ S Sbjct: 359 SASPQPASSGAPAPQPFQYQQQSIPLNVAREAVGVYDKLFGGLREEERALSRPEPAMPSP 418 Query: 395 -----------PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 E LG A AQ+H YI+SQ +GL++VD HAAHER+++E++ Sbjct: 419 AAPLLHPAVLAMPAHDENGIPPLGFALAQLHGVYILSQCAEGLILVDMHAAHERIVYERL 478 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + S I Q LL P E A EH E++ RLG++ P IA+R +P Sbjct: 479 KAALESDAIPLQPLLLPVSFAADRMEVATAHEHGEEMKRLGVELAPLSPTQIAVRGVPVW 538 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 L + +L R ++ ++ + T L +R +LATMAC+G++R+ R++ EMN LLR+ Sbjct: 539 LKDGDPVELARAVLKDVREFGLTQVLTERRNELLATMACHGAVRANRQLTLPEMNALLRD 598 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ME S QCNHGRPT+ +L + D++KLF R Sbjct: 599 MEATERSGQCNHGRPTWTRLTMRDLDKLFMR 629 >gi|66043837|ref|YP_233678.1| DNA mismatch repair protein [Pseudomonas syringae pv. syringae B728a] gi|63254544|gb|AAY35640.1| DNA mismatch repair protein [Pseudomonas syringae pv. syringae B728a] Length = 648 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 218/625 (34%), Positives = 344/625 (55%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGS 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S V + + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLYRALGDVRPENQLGGSVPVVAEARPSGPEAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY----------------------- 389 + L Q + F + T Sbjct: 382 GEMRLANNVLEQPQGEPFARPAAGGGAGSGYQYQYTPRPTAGVPVAEAQSAYREFFAPLP 441 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 S + + ES LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + Sbjct: 442 SAASASLPESPGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMAN 501 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE I + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 502 EGLSGQPLLVPESIAVSQREADCAEEHLATFQRLGFELQRLGPETLAIRQIPALLKQAEA 561 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME Sbjct: 562 NRLVSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTER 621 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L+D++KLF R Sbjct: 622 SGQCNHGRPTWTQMGLNDLDKLFLR 646 >gi|86751283|ref|YP_487779.1| DNA mismatch repair protein [Rhodopseudomonas palustris HaA2] gi|123292100|sp|Q2ISE2|MUTL_RHOP2 RecName: Full=DNA mismatch repair protein mutL gi|86574311|gb|ABD08868.1| DNA mismatch repair protein MutL [Rhodopseudomonas palustris HaA2] Length = 597 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 232/596 (38%), Positives = 360/596 (60%), Gaps = 2/596 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E I+N+IAAGE++ERP+ +KEL+EN++DA +SR++ GGG+ I D+G Sbjct: 1 MPVRQLPETIVNRIAAGEVVERPASVVKELVENAIDAGASRIDIFSDGGGRRKIVIADDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT ++ +AV RH TSK+ D D I T GFRGEALPSIGAV+ LT+ +R Sbjct: 61 SGMTRADLALAVDRHATSKLDDEDLLQIRTLGFRGEALPSIGAVARLTITTRHAGEPHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G S + P A++ GT VEV DLFF PARL FLK+++ E I DV+RR+A+A Sbjct: 121 TLGVEGGDKSPIAPAALSQGTRVEVADLFFATPARLKFLKTDRTEAEAIRDVVRRLAMAR 180 Query: 180 PKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P ++FT + + R+ ++G DF NA+E+ + + ++G+ Sbjct: 181 PDIAFTLAGEERAPVTWAAALPGAPGQLIRLGDILGADFRANAIEVRSEREGVAVEGFAA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P R NA Y+F+NGR V+DK IL +R AY++ +P R+PVV L + ++ R+VD N Sbjct: 241 SPALTRANALGQYLFVNGRPVRDKLILGAVRAAYSDYLPRDRHPVVALFVTLESREVDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK+ +RFRN ++R I+ ++++ + ++G T++ + +IS+F + P + Sbjct: 301 VHPAKTEVRFRNAGLVRALIVHALKEGLAREGRRTAANSAGSVISTFRPASMPAANWDWR 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 A+ + ++ + LG A QIH+ YI Sbjct: 361 ASPSYPVGGSAIDAPSFAERPQAAFDVGGPSADIRTHEVAPDLLDRPLGAARTQIHETYI 420 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +SQT DGL++VDQHAAHER+++E+++ + + Q LL P+I+++ E ++ + Sbjct: 421 VSQTRDGLIVVDQHAAHERIVYERLKASLAANGVQRQILLIPDIVEMDEATVERLVARAD 480 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +L + G+ E FGP A+A+RE P++L K + LLRD+ + + + L+ R+ ++ A Sbjct: 481 ELAQFGLVVESFGPGAVAVRETPSLLGKTDAASLLRDLAEHMAEWDEALPLERRLMHVAA 540 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 TMAC+GS+R+GR ++ EMN LLREME PNS QCNHGRPT+++L L+DIEKLFGR Sbjct: 541 TMACHGSVRAGRVLKPEEMNALLREMEATPNSGQCNHGRPTYVELTLTDIEKLFGR 596 >gi|330971552|gb|EGH71618.1| DNA mismatch repair protein [Pseudomonas syringae pv. aceris str. M302273PT] Length = 648 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 218/625 (34%), Positives = 343/625 (54%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGS 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S V + + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLYRALGDVRPENQLGGSVPVVAETRPSGPEAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY----------------------- 389 + L Q + F + T Sbjct: 382 GEMRLANNMLEQPQGEPFARPAAGGGAGSGYQYQYTPRPTAGVPVAEAQSAYREFFAPLP 441 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 S + ES LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + Sbjct: 442 SAAPASLPESPGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMAN 501 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE I + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 502 EGLSGQPLLVPESIAVSQREADCAEEHLATFQRLGFELQRLGPETLAIRQIPALLKQAEA 561 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME Sbjct: 562 NRLVSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTER 621 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L+D++KLF R Sbjct: 622 SGQCNHGRPTWTQMGLNDLDKLFLR 646 >gi|99079943|ref|YP_612097.1| DNA mismatch repair protein [Ruegeria sp. TM1040] gi|99036223|gb|ABF62835.1| DNA mismatch repair protein MutL [Ruegeria sp. TM1040] Length = 644 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 266/620 (42%), Positives = 386/620 (62%), Gaps = 29/620 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA ++R+ IA GGK+ ++ DNG G Sbjct: 25 IRQLDDGAINRIAAGEVVERPASAVKELVENAIDAGATRITVEIADGGKTLIRVIDNGCG 84 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT E++P+A+ RH TSKI D NIHTFGFRGEALPS+GAV L + SR ++ AQI Sbjct: 85 MTPEDLPLALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLAITSRAEGHD-AAQI 143 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 +SG + VRP A+ G+IVE+RDLFF PARL F+++++ E I+D ++R+A+A P Sbjct: 144 RVSGGHMEPVRPAALRQGSIVELRDLFFATPARLKFMRTDRAEMQAISDTVKRLAMAEPS 203 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQ 234 V FT S R NG+ + R++ VIG +F NA++++ I L Sbjct: 204 VGFTLRDVSGGGEGRVTFRADPMNGDLFDALHGRLAHVIGREFAENALKIDATREGIRLY 263 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG A ++F+N R V+DK + +R AY + + R+P L ++ DP Sbjct: 264 GYAALPTYSRGAAVTQFLFVNARPVKDKMLTGALRAAYMDFLSRDRHPAAALFIDCDPTL 323 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAKS +RFR+P + R I+ +++ A+ + G SS ++ + + + T Sbjct: 324 VDVNVHPAKSEVRFRDPGLARGLIVSALRHALAEAGHRASSTVAGATLGAMRPEQPTATG 383 Query: 355 LPK---------------YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS-----EDND 394 P+ YA + S TYS E Sbjct: 384 APRVYQMDRPSLGARHSAYAAQTPAQPQAPSYAAPPPSDAVGFAEFSGTYSGRLVEETPL 443 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 + A LG A Q+H+NYII+QT DG+VIVDQHAAHERL++E++++ + + Sbjct: 444 EEAQPPAEDQPLGAARGQVHENYIIAQTRDGMVIVDQHAAHERLVYERLKRQLAENGVAT 503 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL PEII+L +G+CA ++E EDL RLG+ E FG +A+A+RE PAIL + N ++R Sbjct: 504 QGLLIPEIIELSDGDCARLLEVAEDLARLGLGIEAFGGSAVAVRETPAILGEVNAEAMIR 563 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 DI+DE+ D + +Q R+E IL+ +AC+GSIRSGR+M+ EMN LLREME+ P+S QCN Sbjct: 564 DILDELADQGESQLVQARLEAILSRVACHGSIRSGRRMRGEEMNALLREMEQTPHSGQCN 623 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRPT+++LKL+DIE+LFGR Sbjct: 624 HGRPTYVELKLADIERLFGR 643 >gi|148549974|ref|YP_001270076.1| DNA mismatch repair protein [Pseudomonas putida F1] gi|148514032|gb|ABQ80892.1| DNA mismatch repair protein MutL [Pseudomonas putida F1] Length = 633 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 212/625 (33%), Positives = 340/625 (54%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LS ++ NQIAAGE++ERP+ KEL+ENSLD+ + R++ + GG ++ D+G Sbjct: 7 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDIEVEQGGVKLLKVRDDGS 66 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++++++P+A+ RH TSKI + D + + GFRGEAL SI +V+ LTL SR + Sbjct: 67 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAW 126 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VIRR+A+A Sbjct: 127 QVETEGRDMTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALA 186 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V F + ++ R+ + G F+ A+ ++ + N + L G+ G Sbjct: 187 RFDVGFHLRHNGKSILSLHEAHDETARARRVGAICGPGFMEQALPIDVERNGLRLWGWVG 246 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL LE++P VDVN Sbjct: 247 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLELEPNGVDVN 306 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------------------NKKGISTSS 335 VHP K +RFR + +F+ ++ +A+ + G Sbjct: 307 VHPTKHEVRFREGRSVHDFLYGTLHRALADVRPEDQLAAPAAVPELVRPTGQQAGEFGPQ 366 Query: 336 VLSKKMISSFHQDNAPKTHLPK------YATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + Q AP+ Y T + + T Sbjct: 367 GEMRLASPVLEQPRAPQQSFSNGGSGAGYQYQYTPRPSQPLPAAEAQAVYREFYKPLDTG 426 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + + ES+ LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ S Sbjct: 427 AAPATALPESQGDIPPLGYALAQLKGIYILAENAVGLVLVDMHAAHERIMYERLKVAMAS 486 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE + L + E EH + RLG + +R GP +AIR+IPA+L + Sbjct: 487 EGLSGQPLLVPETLALSQREADCAEEHAQWFQRLGFELQRLGPETLAIRQIPALLKQAEA 546 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L++D++ ++++ T+ +Q + +L TMAC+G++R+ R++ EMN LLR+ME Sbjct: 547 NRLVQDVLADLMEYGTSDRIQAHLNELLGTMACHGAVRANRRLAIPEMNALLRDMENTER 606 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L D++KLF R Sbjct: 607 SGQCNHGRPTWTQMGLDDLDKLFLR 631 >gi|312958650|ref|ZP_07773170.1| DNA mismatch repair protein [Pseudomonas fluorescens WH6] gi|311287193|gb|EFQ65754.1| DNA mismatch repair protein [Pseudomonas fluorescens WH6] Length = 640 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 213/630 (33%), Positives = 348/630 (55%), Gaps = 39/630 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENS+D+ + R++ + GG ++ D+G Sbjct: 11 RIELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVEQGGVKLLRVRDDGS 70 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR Sbjct: 71 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRNAEQAW 130 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+R+A+A Sbjct: 131 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALA 190 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ R+S + G F+ A+ + + N + L G+ G Sbjct: 191 RFDVAFHLRHNGKTILSLHEAHDEAARARRVSAICGAGFLEQALPIEIERNGLRLWGWVG 250 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 251 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAVVDVN 310 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP------- 351 VHP K +RFR+ ++ +F+ ++ +A+ + LS ++++ + + P Sbjct: 311 VHPTKHEVRFRDGRMVHDFLYGTLHRALG--DVRPDDQLSAPIVTAMVRPSGPEAGEFGP 368 Query: 352 -----------KTHLPKYATSLTN---------------TQEKLFLQENRLSTNDLLPSD 385 ++ P+ + S T Q + + E + + + Sbjct: 369 QGEMSLAGNLLQSPAPQPSYSSTPGSGSGAGYQYQYTPRPQSTVPVAEAQAAYREFFAXX 428 Query: 386 DPTYSEDNDP-VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 + E LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ Sbjct: 429 XXXXXXXXAVSLPEGGGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLK 488 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 S ++ Q LL PE + + + E EH + +LG + +R GP +AIR+IPA+L Sbjct: 489 IAMASEGLSGQPLLVPESLAVSQREADCAEEHHDVFQKLGFELQRLGPETLAIRQIPALL 548 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 + +L+ D++ ++++ T+ +Q I +L TMAC+G++R+ R++ EMN LLR+M Sbjct: 549 KQAEANRLVADVLADLMEYGTSDRIQAHINELLGTMACHGAVRANRRLALPEMNGLLRDM 608 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 E S QCNHGRPT+ ++ L D++KLF R Sbjct: 609 ENTERSGQCNHGRPTWTQMGLDDLDKLFLR 638 >gi|26991574|ref|NP_746999.1| DNA mismatch repair protein [Pseudomonas putida KT2440] gi|37999611|sp|Q88DD1|MUTL_PSEPK RecName: Full=DNA mismatch repair protein mutL gi|24986662|gb|AAN70463.1|AE016688_2 DNA mismatch repair protein MutL [Pseudomonas putida KT2440] Length = 632 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 212/625 (33%), Positives = 340/625 (54%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LS ++ NQIAAGE++ERP+ KEL+ENSLD+ + R++ + GG ++ D+G Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDIEVEQGGVKLLKVRDDGS 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++++++P+A+ RH TSKI + D + + GFRGEAL SI +V+ LTL SR + Sbjct: 66 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAW 125 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VIRR+A+A Sbjct: 126 QVETEGRDMTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V F + ++ R+ + G F+ A+ ++ + N + L G+ G Sbjct: 186 RFDVGFHLRHNGKSILSLHEAHDEIARARRVGAICGPGFMEQALPIDVERNGLRLWGWVG 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL LE++P VDVN Sbjct: 246 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLELEPNGVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------------------NKKGISTSS 335 VHP K +RFR + +F+ ++ +A+ + G Sbjct: 306 VHPTKHEVRFREGRSVHDFLYGTLHRALADVRPEDQLAAPAAVPELVRPTGQQAGEFGPQ 365 Query: 336 VLSKKMISSFHQDNAPKTHLPK------YATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + Q AP+ Y T + + T Sbjct: 366 GEMRLASPVLEQPRAPQQSFSNGGSGAGYQYQYTPRPSQPLPAAEAQAVYREFYKPLETG 425 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + + ES+ LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ S Sbjct: 426 AAPATALPESQGDIPPLGYALAQLKGIYILAENAVGLVLVDMHAAHERIMYERLKVAMAS 485 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE + L + E EH + RLG + +R GP +AIR+IPA+L + Sbjct: 486 EGLSGQPLLVPETLALSQREADCAEEHAQWFQRLGFELQRLGPETLAIRQIPALLKQAEA 545 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L++D++ ++++ T+ +Q + +L TMAC+G++R+ R++ EMN LLR+ME Sbjct: 546 NRLVQDVLADLMEYGTSDRIQAHLNELLGTMACHGAVRANRRLAIPEMNALLRDMENTER 605 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L D++KLF R Sbjct: 606 SGQCNHGRPTWTQMGLDDLDKLFLR 630 >gi|71275150|ref|ZP_00651437.1| DNA mismatch repair protein [Xylella fastidiosa Dixon] gi|71898231|ref|ZP_00680405.1| DNA mismatch repair protein [Xylella fastidiosa Ann-1] gi|170731141|ref|YP_001776574.1| DNA mismatch repair protein [Xylella fastidiosa M12] gi|238687954|sp|B0U5C6|MUTL_XYLFM RecName: Full=DNA mismatch repair protein mutL gi|71163959|gb|EAO13674.1| DNA mismatch repair protein [Xylella fastidiosa Dixon] gi|71731970|gb|EAO34027.1| DNA mismatch repair protein [Xylella fastidiosa Ann-1] gi|167965934|gb|ACA12944.1| DNA mismatch repair protein MutL [Xylella fastidiosa M12] Length = 621 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 219/621 (35%), Positives = 349/621 (56%), Gaps = 29/621 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +INQIAAGE++ERP+ +KEL+EN++DA ++RV+ + G +I DNG Sbjct: 1 MPIRQLPEILINQIAAGEVVERPASVVKELVENAIDAGATRVDIELEAAGVRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM ++E+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TLMSR + G Sbjct: 61 HGMAAQELPLAVLRHATSKIASLDDLEAVATLGFRGEALPSIASVSRFTLMSRRATDEHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 A + I G + V P A PGT VEVR+LF+ +PAR FL++E+ E I + R +A+A Sbjct: 121 AVLQIEGGTLGEVIPHAHAPGTTVEVRELFYNVPARRKFLRAERTELGHIEEWARSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P + S + + + +++GEDF + A+ ++ + L G Sbjct: 181 HPDLELRLSHNGKLSRRYKPGDWYSDAR--LIEILGEDFAHQALRVDHSGAGLRLHGCIV 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R NA+Q Y+++NGR V+D+ + ++ AY++ + GR+P VL LE+DP +VDVN Sbjct: 239 QPHYSRLNADQQYLYVNGRPVRDRSVAHAVKQAYSDVLYQGRHPAYVLFLELDPARVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKK--GISTSSVLSKKMISSFHQDNAPKTHLP 356 VHPAK +RFR+ +I +F+ +++Q + + G +V + P H Sbjct: 299 VHPAKHEVRFRDARLIHDFVYRTVQGTLAQTRAGTPPLAVGVGDVEGEGEGARPPGRHAV 358 Query: 357 KYAT----------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY-- 404 ++ S + + L +S D + Y+ V ++ Sbjct: 359 SFSGRRGGASHVLGSYSTSTAPLMQGVPSVSVADAPAAYAALYAAPPTQVMDAVPQMQTG 418 Query: 405 -----------QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 LG A AQ+H YI+++ DGL++VD HAAHER+ +E++++ + + Sbjct: 419 LPLAAGAGDVPPLGYAIAQLHGIYILAECADGLIVVDMHAAHERIGYERLKRAHDGIGLR 478 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 +Q LL P + + E E + E L LG + R GP ++ +R IPA+LS+ LL Sbjct: 479 TQPLLVPMTLMVAEREADVAECEAETLASLGFEVTRSGPGSLQVRSIPALLSQAEPEMLL 538 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 RD++ ++ + T + + + +LATMAC+G++R+ R++ EMN LLR+ME S QC Sbjct: 539 RDVLSDLSEHGHTRRVAEARDTLLATMACHGAVRAHRRLSISEMNALLRDMEATERSGQC 598 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 NHGRPT+ + L++I++ F R Sbjct: 599 NHGRPTWARFSLAEIDRWFLR 619 >gi|330984562|gb|EGH82665.1| DNA mismatch repair protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 648 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 215/625 (34%), Positives = 344/625 (55%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTSRARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S + + + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPENQLGGSVPVAVEPRPTGPEAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN------------------- 393 + L Q + F + T + Sbjct: 382 GEMRLANNVLEQPQGEPFARPAAGGGAGSGYQYQYTPRPTSGVPVAEAQSAYREFFAPLP 441 Query: 394 ----DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + ES LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + Sbjct: 442 STAPSSLPESPGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMAN 501 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE + + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 502 EGLSGQPLLVPESLAVSQREADCAEEHIATFQRLGFELQRLGPETLAIRQIPALLKQAEA 561 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME Sbjct: 562 NRLVSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTER 621 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L+D++KLF R Sbjct: 622 SGQCNHGRPTWTQMGLNDLDKLFLR 646 >gi|257482413|ref|ZP_05636454.1| DNA mismatch repair protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331009762|gb|EGH89818.1| DNA mismatch repair protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 648 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 215/625 (34%), Positives = 345/625 (55%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTSRARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S + + + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPENQLGGSVPVAVEPRPTGPEAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN------------------- 393 + L + Q + F + T + Sbjct: 382 GEMRLANNVLEHPQGEPFARPAAGGGAGSGYQYQYTPRPTSGVPVAEAQSAYREFFAPLP 441 Query: 394 ----DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + ES LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + Sbjct: 442 STAPSSLPESPGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMAN 501 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE + + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 502 EGLSGQPLLVPESLAVSQREADCAEEHIATFQRLGFELQRLGPETLAIRQIPALLKQAEA 561 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME Sbjct: 562 NRLVSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTER 621 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L+D++KLF R Sbjct: 622 SGQCNHGRPTWTQMGLNDLDKLFLR 646 >gi|167035937|ref|YP_001671168.1| DNA mismatch repair protein [Pseudomonas putida GB-1] gi|189030406|sp|B0KKZ7|MUTL_PSEPG RecName: Full=DNA mismatch repair protein mutL gi|166862425|gb|ABZ00833.1| DNA mismatch repair protein MutL [Pseudomonas putida GB-1] Length = 632 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 209/625 (33%), Positives = 339/625 (54%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LS ++ NQIAAGE++ERP+ KEL+ENSLD+ + R++ + GG ++ D+G Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDVEVEQGGVKLLKVRDDGS 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++++++P+A+ RH TSKI + D + + GFRGEAL SI +V+ LT+ SR + Sbjct: 66 GISADDLPLALARHATSKIRELEDLEGVMSLGFRGEALASISSVARLTMTSRTASASEAW 125 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VIRR+A+A Sbjct: 126 QVETEGRDMTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V F + ++ R+ + G F+ A+ ++ + N + L G+ G Sbjct: 186 RFDVGFHLRHNGKSILSLHEAHDETARARRVGAICGPGFMEQALPIDVERNGLRLWGWVG 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL LE++P VDVN Sbjct: 246 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLELEPNGVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------------------NKKGISTSS 335 VHP K +RFR + +F+ ++ +A+ + G Sbjct: 306 VHPTKHEVRFREGRSVHDFLYGTLHRALADVRPEDQLAAPAAVPELARPTGQQAGEFGPQ 365 Query: 336 VLSKKMISSFHQDNAPKTHLPK------YATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + Q AP+ Y T + + Sbjct: 366 GEMRLASPVLEQPRAPQQSFSNGGSGAGYQYQYTPRPSQPLPAAEAQAVYREFYKPLDNG 425 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + + ES+ LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ S Sbjct: 426 AAAATALPESQGDIPPLGYALAQLKGIYILAENAVGLVLVDMHAAHERIMYERLKVAMAS 485 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE + L + E EH + RLG + +R GP +A+R+IPA+L + Sbjct: 486 EGLSGQPLLVPETLALSQREADCAEEHAQWFQRLGFELQRLGPETLAVRQIPALLKQAEA 545 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L++D++ ++++ T+ +Q + +L TMAC+G++R+ R++ EMN LLR+ME Sbjct: 546 NRLVQDVLADLMEYGTSDRIQAHLNELLGTMACHGAVRANRRLAIPEMNALLRDMENTER 605 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L D++KLF R Sbjct: 606 SGQCNHGRPTWTQMGLDDLDKLFLR 630 >gi|330951472|gb|EGH51732.1| DNA mismatch repair protein [Pseudomonas syringae Cit 7] Length = 648 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 218/625 (34%), Positives = 343/625 (54%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGS 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S V + + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLYRALGDVRPENQLGGSVPVVAETRPSGPEAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY----------------------- 389 + L Q + F + T Sbjct: 382 GEMRLANNVLEQPQGESFARPAAGGGAGSGYQYQYTPRPTAGVPVAEAQSAYREFFAPLP 441 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 S + ES LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + Sbjct: 442 SAAPASLPESPGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMAN 501 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE I + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 502 EGLSGQPLLVPESIAVSQREADCAEEHLATFQRLGFELQRLGPETLAIRQIPALLKQAEA 561 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME Sbjct: 562 NRLVSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTER 621 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L+D++KLF R Sbjct: 622 SGQCNHGRPTWTQMGLNDLDKLFLR 646 >gi|289623754|ref|ZP_06456708.1| DNA mismatch repair protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648629|ref|ZP_06479972.1| DNA mismatch repair protein [Pseudomonas syringae pv. aesculi str. 2250] gi|320321886|gb|EFW77982.1| DNA mismatch repair protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331009|gb|EFW86983.1| DNA mismatch repair protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330865892|gb|EGH00601.1| DNA mismatch repair protein [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 648 Score = 565 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 215/625 (34%), Positives = 343/625 (54%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTSRARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S + + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPENQLGGSVPVAAEPRPTGPEAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN------------------- 393 + L Q + F + T + Sbjct: 382 GEMRLANNVLEQPQGEPFARPAAGGGAGSGYQYQYTPRPTSGVPVAEAQSAYREFFAPLP 441 Query: 394 ----DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + ES LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + Sbjct: 442 STAPSSLPESPGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMAN 501 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE + + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 502 EGLSGQPLLVPESLAVSQREADCAEEHIATFQRLGFELQRLGPETLAIRQIPALLKQAEA 561 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME Sbjct: 562 NRLVSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTER 621 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L+D++KLF R Sbjct: 622 SGQCNHGRPTWTQMGLNDLDKLFLR 646 >gi|288958816|ref|YP_003449157.1| DNA mismatch repair protein [Azospirillum sp. B510] gi|288911124|dbj|BAI72613.1| DNA mismatch repair protein [Azospirillum sp. B510] Length = 643 Score = 565 bits (1455), Expect = e-158, Method: Composition-based stats. Identities = 239/642 (37%), Positives = 373/642 (58%), Gaps = 48/642 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L E ++N+IAAGE++ERP+ A+KEL+EN++DA ++R++ V GGKS +TD+G Sbjct: 1 MPIRLLPETLVNRIAAGEVVERPAAAVKELVENAIDAGATRIDVVARDGGKSLIAVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT++E+ +AV+RH TSK+ DD +I + GFRGEALPSIGAVS LT+ SR ++ Sbjct: 61 CGMTADELVLAVERHATSKLPGDDLLDIRSLGFRGEALPSIGAVSCLTITSRARGADSAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + S +P A+ GT +EVRDLF +PARL FLK+ + E + I D + R+A+A+ Sbjct: 121 SLTVDAGAKGSPQPAALAQGTRIEVRDLFAAVPARLKFLKASRTEYDHIADCLERLAMAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTN--GNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P V+FT S +++ R+ ++G DF NAV + +TL G+ Sbjct: 181 PAVAFTLSDGGRGGLRLSAAQGELLDARLTRLGALMGRDFQENAVPVTAAREGVTLAGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+PT +R A ++F+NGR V+DK ++ +R AYA+ +P R+P++ L L+IDP++VDV Sbjct: 241 GLPTLHRPTAKHQHLFVNGRPVRDKLMVGAVRAAYADFLPRDRHPMLALFLDIDPQEVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP------ 351 NVHPAK+ +RFR+ ++R I+ S++ A+ + G S+ + + + + Sbjct: 301 NVHPAKAEVRFRDQGLVRGLIVGSLKHALAEAGHRASTTVGLATLGALRPEPGGGSVGES 360 Query: 352 ----------------------------------KTHLPKYATSLTNTQEKLFLQENRL- 376 L + + + + L + RL Sbjct: 361 GGESGGFTPSPLPYGRSGGGSGSGWGGSYAPAALPRGLAERSAAFQAPAQGLPPLQGRLG 420 Query: 377 ----STNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 + + P E + LG A AQ+H YI++QT +G+VIVDQH Sbjct: 421 GFGNGFAPAARPPEYRAPDPAAPTPEPPPDSHPLGAARAQLHTTYIVAQTREGIVIVDQH 480 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AAHERL++E+M+ + Q LL PE+I+L E ++ +L LG+ E FG Sbjct: 481 AAHERLVYERMKTALLEGGVKRQALLIPELIELDEPSANRLLARGAELAELGLVIEGFGH 540 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 + +RE+PA+L + ++ L+RD+ +E+ + +L++R+E + ATMAC+GS+R+GR + Sbjct: 541 GCVMVREVPALLGQSDVKNLIRDLAEELSELGDALSLKERLEEVCATMACHGSVRAGRTL 600 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME P+S QCNHGRPT+++LKL+DIE+LFGR Sbjct: 601 SVDEMNALLRQMEATPHSGQCNHGRPTYVELKLADIERLFGR 642 >gi|190890558|ref|YP_001977100.1| DNA mismatch repair protein [Rhizobium etli CIAT 652] gi|238692496|sp|B3PRD9|MUTL_RHIE6 RecName: Full=DNA mismatch repair protein mutL gi|190695837|gb|ACE89922.1| DNA mismatch repair protein [Rhizobium etli CIAT 652] Length = 606 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 303/607 (49%), Positives = 408/607 (67%), Gaps = 15/607 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+LSE +INQIAAGE+IERP+ A KELIEN+LDA ++R+E AGGGK+ +++DNG Sbjct: 1 MAIRQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEIATAGGGKALLRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM + ++ +AV+RHCTSKIS+ +I T GFRGEALPSIG+V+ L + SR + G + Sbjct: 61 SGMEATDLELAVRRHCTSKISETLEDIRTLGFRGEALPSIGSVARLNIASRRRDSAGGHE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 IA++G KI +RP A NPGTIVEVRDLFF PARL FLKSE+ E IT++++RMAIA+P Sbjct: 121 IAVAGGKIVHIRPAAANPGTIVEVRDLFFATPARLKFLKSEKAEAGAITEIVKRMAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F S S+R + F +T + R++QV+G++F +NA+ L+ +I+L G+ G+P Sbjct: 181 AVRFVLS--GSDRTTLEFPATGDDHLARMAQVLGKEFRDNAILLDAVREDISLTGFAGVP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGN+ Y F+NGR VQDK ILS IR AYAETIP GRYPV VL + +DP VDVNVH Sbjct: 239 TFNRGNSAHQYAFVNGRPVQDKLILSAIRGAYAETIPSGRYPVAVLSITLDPALVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAKS +RFR+P ++R I+ +I++A+ + G ++ + M+ +F P P+ Sbjct: 299 PAKSDVRFRDPGLVRGLIVGAIREALARDGSRAATTGASDMLRAFRPGFQPHAQRPQAPW 358 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT-------------HYQLG 407 S + + + S D + ++ S Y LG Sbjct: 359 SAETSPFRPYPPAAGFSERPQASFDRLSMPTARAELQPSPQPGAPEPAASAETTGRYPLG 418 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 A AQIH NYI++QT DGLVIVDQHAAHERL+FE MR+ +S ++ SQ LL PEIIDL E Sbjct: 419 AARAQIHANYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHSKRLASQVLLIPEIIDLPE 478 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 +C +M+H +L LG+ ERFGP AIA+RE PA+L + + L+R + DEI + T Sbjct: 479 EDCDRLMQHAAELSELGLAIERFGPGAIAVRETPAMLGEVDAHGLIRQLADEIAEWDTAS 538 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 L ++E + ATMAC+GS+RSGR+++ EMN LLREME P S QCNHGRPT+I+LKLSD Sbjct: 539 GLSAKLEYVAATMACHGSVRSGRRLRPEEMNALLREMEVTPGSGQCNHGRPTYIELKLSD 598 Query: 588 IEKLFGR 594 IE+LFGR Sbjct: 599 IERLFGR 605 >gi|302189791|ref|ZP_07266464.1| DNA mismatch repair protein [Pseudomonas syringae pv. syringae 642] Length = 648 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 217/625 (34%), Positives = 343/625 (54%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S V + + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLYRALGDVRPENQLGGSVPVVAETRPSGPEAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN------------------- 393 + L Q + F + T + Sbjct: 382 GEMRLANNVLEQPQGEPFARPAAAGGTGSGYQYQYTPRPTSGVPVAEAQSAYREFFAPLP 441 Query: 394 ----DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + ES LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + Sbjct: 442 SAAPASLPESPGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMAN 501 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE I + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 502 EGLSGQPLLVPESIAVSQREADCAEEHLATFQRLGFELQRLGPETLAIRQIPALLKQAEA 561 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME Sbjct: 562 NRLVSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTER 621 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L+D++KLF R Sbjct: 622 SGQCNHGRPTWTQMGLNDLDKLFLR 646 >gi|71738065|ref|YP_272865.1| DNA mismatch repair protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298484916|ref|ZP_07003015.1| DNA mismatch repair protein MutL [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71558618|gb|AAZ37829.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv. phaseolicola 1448A] gi|298160603|gb|EFI01625.1| DNA mismatch repair protein MutL [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 648 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 216/625 (34%), Positives = 343/625 (54%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTMLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S + + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPENQLGGSVPVAAEPRPTGPEAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY----------------------- 389 + L Q + F + T Sbjct: 382 GEMRLANNVLEQPQGEPFARPAAGGGAGSGYQYQYTPRPTSGVPVAEAQSAYREFFAPLP 441 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 S + + ES LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + Sbjct: 442 SAASSSLPESPGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMAN 501 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE + + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 502 EGLSGQPLLVPESLAVSQREADCAEEHIATFQRLGFELQRLGPETLAIRQIPALLKQAEA 561 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME Sbjct: 562 NRLVSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTER 621 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L+D++KLF R Sbjct: 622 SGQCNHGRPTWTQMGLNDLDKLFLR 646 >gi|134093680|ref|YP_001098755.1| DNA mismatch repair protein [Herminiimonas arsenicoxydans] gi|166232092|sp|A4G289|MUTL_HERAR RecName: Full=DNA mismatch repair protein mutL gi|133737583|emb|CAL60626.1| DNA mismatch repair protein MutL [Herminiimonas arsenicoxydans] Length = 612 Score = 564 bits (1453), Expect = e-158, Method: Composition-based stats. Identities = 205/605 (33%), Positives = 336/605 (55%), Gaps = 16/605 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ LS+++I+QIAAGE++ERPS +KEL+EN+LDA ++ + + GG ITDNG Sbjct: 10 PIQALSDQLISQIAAGEVVERPSAVVKELLENALDAGATHISVRLEQGGVKRIAITDNGR 69 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A+ RH TSKI+ + N+ T GFRGEAL SI +VS LTL SR Sbjct: 70 GIAPEQLPLALARHATSKINSLTELENVATLGFRGEALASIASVSQLTLTSRTADAAHAW 129 Query: 120 QI--AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 +I S ++ S+V P + GT V+V DL+F PAR FLK+EQ E +V+RR+A+ Sbjct: 130 EISGVQSIDQKSTVAPSSGTAGTTVDVLDLYFNTPARRKFLKTEQTEFGHCAEVVRRIAL 189 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + P V+F+ + + R + ++G +F + L E + + L G+ Sbjct: 190 SRPDVAFSLTHNGKTIDHW----AVNDIARRSAHILGNEFSAARLPLKETAGPLRLHGFI 245 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+PT ++ + Y ++NGR V+DK ++ +R+AY + + RYP V+ LE+DP VDV Sbjct: 246 GLPTASKARGDAQYFYVNGRFVRDKLLMHAVRSAYQDVLHGDRYPSYVISLELDPALVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINK-----KGISTSSVLSKKMISSFHQDNAPK 352 NVHP+K +RFR+ + F+ ++ +A+ + G + S + + ++ Sbjct: 306 NVHPSKIEVRFRDSRAVHQFVFHAVTRALAQTSATAFGAAPSPTPAPSSALPWLREQQQS 365 Query: 353 THLPKYATSLTNTQEKLFLQE---NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 T P++ + Q N ++ND + ++ + + LG A Sbjct: 366 TFAPQFNSPYGVAQSAANYGALFANGPASNDSNSAAPSLHTAGSHGATTLPDDEFPLGFA 425 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 AQ+H +I++Q T GLV+VD HAAHER+++E+++ + ++ Q LL P E Sbjct: 426 LAQLHGIFILAQNTKGLVLVDMHAAHERILYEQLKHALDDNELQVQPLLIPITFYADGME 485 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 ++ + LH LG P +A+R +PA+L + L RD++ ++ + + L Sbjct: 486 VGTTEDNQDILHALGFDIAALSPTTLAVRAVPALLKNADAQTLARDVLRDVREFGGSRVL 545 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 +R +L T+AC+ ++R+ R + EMN LLR+ME + QCNHGRPT+++L LSD++ Sbjct: 546 LERRNELLGTLACHTAVRANRTLTVPEMNALLRQMEATERADQCNHGRPTWVQLGLSDLD 605 Query: 590 KLFGR 594 KLF R Sbjct: 606 KLFER 610 >gi|254510493|ref|ZP_05122560.1| DNA mismatch repair protein MutL [Rhodobacteraceae bacterium KLH11] gi|221534204|gb|EEE37192.1| DNA mismatch repair protein MutL [Rhodobacteraceae bacterium KLH11] Length = 616 Score = 564 bits (1453), Expect = e-158, Method: Composition-based stats. Identities = 261/602 (43%), Positives = 382/602 (63%), Gaps = 11/602 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA ++R+ IA GGK+ ++TD+G G Sbjct: 15 IRQLDDAAINRIAAGEVVERPASAVKELVENAIDAGATRIAIDIADGGKTLIRVTDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + ++P+A+ RH TSKI D NIHTFGFRGEALPS+GAV L++ SR P A I Sbjct: 75 IAASDLPLALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLSITSRVPGAE-AASI 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 +SG ++ +VRP A+ GT+VE+RDLF+ PARL F+++++ E I+D+++R+A+A P Sbjct: 134 RVSGGQMQAVRPAALRAGTVVELRDLFYATPARLKFMRTDRAEAQAISDIVKRLAMAEPA 193 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQ 234 VSFT S R NG+ + R+++V+G +F NA++++ I L Sbjct: 194 VSFTLRDVSGGGEGRVTFRTDRENGDLFDALHARLARVLGREFAENALQIDATREGIRLY 253 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG A Y+F+NGR V+DK + +R AY + + R+P L ++ DP Sbjct: 254 GYAALPTYSRGAAVAQYLFVNGRPVRDKMLTGALRAAYFDFLSRDRHPAAALFIDCDPTL 313 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAKS +RFR+P + R I+ S++ A+ + G SS ++ + + + AP Sbjct: 314 VDVNVHPAKSEVRFRDPGLARGLIVSSLRHALAEAGHRASSTVANATLGAMRPEPAPSAP 373 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSD--DPTYSEDNDPVEESEATHYQLGIACAQ 412 Y + + + L D + E LG A Q Sbjct: 374 ARVYQMDRPSPAARQAAYRAQSPGFAELSQDYSGRVVDPAPEVAPVEEPQDLPLGAARGQ 433 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +H+NYII+QT DG+VIVDQHAAHERL++EK++ + +Q LL PEI++L +G+C Sbjct: 434 VHENYIIAQTADGMVIVDQHAAHERLVYEKLKSQMAENGVAAQALLIPEIVELSDGDCTR 493 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 +M EDL RLG+ E FG AIAIRE PAIL + + ++ DI+DE+ D + +Q R Sbjct: 494 LMAVAEDLSRLGLTIEAFGGGAIAIRETPAILGEVDARAMILDILDELADQGESQMVQAR 553 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 IE IL+ +AC+GSIRSGR+M++ EMN LLREME P+S QCNHGRPT+++LKL DIE+LF Sbjct: 554 IEAILSRVACHGSIRSGRRMRAEEMNALLREMEATPHSGQCNHGRPTYVELKLGDIERLF 613 Query: 593 GR 594 GR Sbjct: 614 GR 615 >gi|313500875|gb|ADR62241.1| MutL [Pseudomonas putida BIRD-1] Length = 632 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 211/625 (33%), Positives = 339/625 (54%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LS ++ NQIAAGE++ERP+ KEL+ENSLD+ + R++ + GG ++ D+G Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDVEVEQGGVKLLKVRDDGS 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++++++P+A+ RH TSKI + D + + GFRGEAL SI +V+ LTL SR + Sbjct: 66 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAW 125 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VIRR+A+A Sbjct: 126 QVETEGRDMTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V F + ++ R+ + G F+ A+ ++ + N + L G+ G Sbjct: 186 RFDVGFHLRHNGKSILSLHEAHDETARARRVGAICGPGFMEQALPIDVERNGLRLWGWVG 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL LE++P VDVN Sbjct: 246 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLELEPNGVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------------------NKKGISTSS 335 VHP K +RFR + +F+ ++ +A+ + G Sbjct: 306 VHPTKHEVRFREGRSVHDFLYGTLHRALADVRPEDQLAAPAAVPELVRPTGQQAGEFGPQ 365 Query: 336 VLSKKMISSFHQDNAPKTHLPK------YATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + Q AP+ Y T + + Sbjct: 366 GEMRLASPVLEQPRAPQQSFSNSGSGAGYQYQYTPRPSQPLPAAEAQAVYREFYKPLEGG 425 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + + ES+ LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ S Sbjct: 426 AAPATALPESKGDIPPLGYALAQLKGIYILAENAVGLVLVDMHAAHERIMYERLKVAMAS 485 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE + L + E EH + RLG + +R GP +AIR+IPA+L + Sbjct: 486 EGLSGQPLLVPETLALSQREADCAEEHSQWFQRLGFELQRLGPETLAIRQIPALLKQAEA 545 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L++D++ ++++ T+ +Q + +L TMAC+G++R+ R++ EMN LLR+ME Sbjct: 546 NRLVQDVLADLMEYGTSDRIQAHLNELLGTMACHGAVRANRRLAIPEMNALLRDMENTER 605 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L D++KLF R Sbjct: 606 SGQCNHGRPTWTQMGLDDLDKLFLR 630 >gi|325271237|ref|ZP_08137782.1| DNA mismatch repair protein [Pseudomonas sp. TJI-51] gi|324103640|gb|EGC00942.1| DNA mismatch repair protein [Pseudomonas sp. TJI-51] Length = 632 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 212/625 (33%), Positives = 337/625 (53%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LS ++ NQIAAGE++ERP+ KEL+ENSLD+ + R++ + GG ++ D+G Sbjct: 6 RIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDVEVEQGGVKLLKVRDDGS 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++++++P+A+ RH TSKI + D + + GFRGEAL SI +V+ LTL SR Sbjct: 66 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASATEAW 125 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + V+P A GT VEVRDLFF PAR FLK+E+ E + + +VIRR+A+A Sbjct: 126 QVETEGRDMLPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V F + ++ R+ + G F+ A+ ++ + N + L G+ G Sbjct: 186 RFDVGFHLRHNGKSILSLHEAHDEVARARRVGAICGPGFMEQALPIDVERNGLRLWGWVG 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL LE++P VDVN Sbjct: 246 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLELEPNGVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------------------NKKGISTSS 335 VHP K +RFR + +F+ ++ +A+ + G Sbjct: 306 VHPTKHEVRFREGRSVHDFLYGTLHRALADVRPEDQLAAPAAVPEAVRATGQQAGEFGPQ 365 Query: 336 VLSKKMISSFHQDNAPKTHLPK------YATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + Q AP+ Y T + Sbjct: 366 GEMRLASPVLEQPRAPQHTASNGGSGAGYQYQYTPRPSPPLPAAEAQAVYREFYKPLDNG 425 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + + ES+ LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ S Sbjct: 426 AAPAATLPESQGDIPPLGYALAQLKGIYILAENAVGLVLVDMHAAHERIMYERLKVAMAS 485 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE + L + E EH + RLG + +R GP +AIR+IPA+L + Sbjct: 486 EGLSGQPLLVPETLALSQREADCAEEHAQWFQRLGFELQRLGPETLAIRQIPALLKQAEA 545 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L++D++ ++++ T+ +Q + +L TMAC+G++R+ R++ EMN LLR+ME Sbjct: 546 NRLVQDVLADLMEYGTSDRIQAHLNELLGTMACHGAVRANRRLAIPEMNALLRDMENTER 605 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L D++KLF R Sbjct: 606 SGQCNHGRPTWTQMGLDDLDKLFLR 630 >gi|27382604|ref|NP_774133.1| DNA mismatch repair protein [Bradyrhizobium japonicum USDA 110] gi|81841408|sp|Q89DE6|MUTL_BRAJA RecName: Full=DNA mismatch repair protein mutL gi|27355776|dbj|BAC52758.1| DNA mismatch repair protein [Bradyrhizobium japonicum USDA 110] Length = 603 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 235/602 (39%), Positives = 371/602 (61%), Gaps = 8/602 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E+++N+IAAGE++ERP+ +KEL+EN++DA +SR++ GGG+ ITD+G Sbjct: 1 MPVRQLPEQVVNRIAAGEVVERPASVVKELVENAIDAGASRIDVFTDGGGRRRIGITDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT++++ +AV+RH TSK+ D D I T GFRGEALPSIG+V+ L++ +R Sbjct: 61 SGMTAKDLALAVERHATSKLDDEDLLQIRTLGFRGEALPSIGSVARLSITTRHAGEPHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + S + P A+ GT VEV DLF+ PARL FLK+++ E I +V+RR+A+A Sbjct: 121 ALTVEGGEKSEIMPAALAHGTRVEVNDLFYATPARLKFLKTDRTEAEAIREVVRRLAMAR 180 Query: 180 PKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V+FT + + R+ ++G +F ++A+E++ + I + GY Sbjct: 181 PDVAFTLAGEERAPVTWAAALPGAAGRLTRLGDILGAEFRSHAIEVHAEREGIVVSGYAA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P + NA Y+F+NGR V+DK IL +R AY++ +P R+PV+ L + +DPR+VD N Sbjct: 241 APALTKANALGQYLFVNGRPVRDKLILGAVRAAYSDYLPRDRHPVLALFVTLDPREVDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK+ +RFRN ++R I+ +++A+ ++G T++ + +SSF P+ + Sbjct: 301 VHPAKTEVRFRNAGLVRALIVHGLKEALAREGRRTAANSGESALSSFRPAFTPRPASWDW 360 Query: 359 ATSLTNT--QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA----Q 412 S + F + + + + D E++ + Q Sbjct: 361 RASPSAPVAPMPSFDGAAAPAFTERAQAAFDVGAPSADVRFETQPVSDLVDRPLGAARTQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 IH+ YI+SQT DGL+IVDQHAAHER+++E ++ + + Q LL PEI+++ E Sbjct: 421 IHETYIVSQTRDGLIIVDQHAAHERIVYEGLKASLAANGVQRQILLIPEIVEMDEATVER 480 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 ++E ++L G+ E FGP A+A+RE P++L K N LLRD+ + + + L+ R Sbjct: 481 LLERSDELASFGLAIESFGPGAVAVRETPSLLGKTNAGGLLRDLSEHMAEWDEALPLERR 540 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 + ++ ATMAC+GS+R+GR+++ EMN LLREME+ PNS QCNHGRPT+++LKLSD+EKLF Sbjct: 541 LMHVAATMACHGSVRAGRRLRPEEMNALLREMEETPNSGQCNHGRPTYVELKLSDVEKLF 600 Query: 593 GR 594 GR Sbjct: 601 GR 602 >gi|218682547|ref|ZP_03530148.1| DNA mismatch repair protein [Rhizobium etli CIAT 894] Length = 600 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 299/601 (49%), Positives = 408/601 (67%), Gaps = 9/601 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+LSE +INQIAAGE+IERP+ A KELIEN+LDA ++R+E A GGK+ +++DNG Sbjct: 1 MAIRQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEIATASGGKALLRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM + ++ +AV+RHCTSK+SD +I T GFRGEALPSIG+V+ L++ SR + G + Sbjct: 61 SGMDAADLELAVRRHCTSKLSDTLEDIRTLGFRGEALPSIGSVARLSIASRRRDSAGGHE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 IA++ KI+ +RP A NPGTIVEVRDLFF PARL FLKSE+ E IT++++RMAIA+P Sbjct: 121 IAVNAGKITHLRPAAANPGTIVEVRDLFFATPARLKFLKSEKAEAGAITEIVKRMAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F S S+R + F +T + R++QV+G++F +NA+ L+ EI+L G+ G+P Sbjct: 181 AVRFVLS--GSDRATLEFPATGDDHLARMAQVLGKEFRDNAIALDAVREEISLTGFAGVP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGN+ Y F+NGR VQDK ILS IR AYAETIP GRYPV VL + +DP VDVNVH Sbjct: 239 TFNRGNSAHQYAFVNGRPVQDKLILSAIRGAYAETIPSGRYPVAVLSITLDPALVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAKS +RFR+P ++R I+ +I++A+ + G ++ + M+ +F P+ A Sbjct: 299 PAKSDVRFRDPGLVRGLIVGAIREALARDGSRAATTGASDMLRAFRPGFQSYAPRPQTAW 358 Query: 361 SLTNTQEKLF------LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL-GIACAQI 413 S + + + + + S + L + + E G A AQI Sbjct: 359 SAETSPSRPYQPAMGLSERPQASFDGLSMPTARAEPQFSPQPAAPEPAARYPLGAARAQI 418 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H NYI++QT DGLVIVDQHAAHERL+FE MR+ +S ++ SQ LL PEIID+ E +C + Sbjct: 419 HANYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHSKRLASQVLLIPEIIDIPEEDCDRL 478 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 M+H +L LG+ ERFGP AIA+RE PA+L + + L+R + DEI + T L ++ Sbjct: 479 MQHAAELSELGLSIERFGPGAIAVRETPAMLGEVDAHGLIRQLADEIAEWDTASGLSAKL 538 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E + ATMAC+GS+RSGR+++ EMN LLREME P S QCNHGRPT+I+LKLSDIE+LFG Sbjct: 539 EYVAATMACHGSVRSGRRLRPEEMNALLREMEVTPGSGQCNHGRPTYIELKLSDIERLFG 598 Query: 594 R 594 R Sbjct: 599 R 599 >gi|28872058|ref|NP_794677.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv. tomato str. DC3000] gi|37999555|sp|Q87VJ2|MUTL_PSESM RecName: Full=DNA mismatch repair protein mutL gi|28855311|gb|AAO58372.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv. tomato str. DC3000] Length = 645 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 220/622 (35%), Positives = 348/622 (55%), Gaps = 29/622 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDIDVEQAGIKLLKVRDDGG 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + + +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMDARVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLHEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S + + + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPENQLGGSVPAAAEPRPTGPDAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQE------------NRLSTNDLLPSDDPTYSED-------- 392 + L Q + F + R +T + Y E Sbjct: 382 GEMRLANNVLEQPQGEPFARPAGGGSGSGYQYSPRPTTGVPVAEAQSAYREFFAPLPGTT 441 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + ES + LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + + Sbjct: 442 PSALPESPSDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMANEGL 501 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 + Q LL PE I + + E EH RLG + +R GP +AIR+IPA+L + +L Sbjct: 502 SGQPLLVPESIAVSQREADCAEEHITTFQRLGFELQRLGPETLAIRQIPALLKQAEANRL 561 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME S Q Sbjct: 562 VSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTERSGQ 621 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+ ++ LSD++KLF R Sbjct: 622 CNHGRPTWTQMGLSDLDKLFLR 643 >gi|259417261|ref|ZP_05741180.1| DNA mismatch repair protein [Silicibacter sp. TrichCH4B] gi|259346167|gb|EEW57981.1| DNA mismatch repair protein [Silicibacter sp. TrichCH4B] Length = 643 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 260/620 (41%), Positives = 384/620 (61%), Gaps = 29/620 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA ++R+ IA GGK+ ++ DNG G Sbjct: 24 IRQLDDSAINRIAAGEVVERPASAVKELVENAIDAGATRITVEIADGGKTLIRVIDNGCG 83 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT E++P+A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR + AQI Sbjct: 84 MTPEDLPLALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLTITSRAEGYD-AAQI 142 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++G + V+P A+ GTIVE+RDLFF PARL F+++++ E+ I+D ++R+A+A P Sbjct: 143 RVAGGHLELVKPAALRQGTIVELRDLFFATPARLKFMRTDRAESQAISDTVKRLAMAEPA 202 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQ 234 V FT S R +G+ + R++ VIG +F NA++++ I L Sbjct: 203 VGFTLRDVSGGGEGRVTFRADPMSGDLFDALHGRLAHVIGREFAENALKIDATREGIRLY 262 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG A ++F+N R V+DK + +R AY + + R+P L ++ DP Sbjct: 263 GYAALPTYSRGAAVTQFLFVNTRPVKDKMLTGALRAAYMDFLSRDRHPAAALFIDCDPTL 322 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAKS +RFR+P + R I+ S++ A+ + G SS ++ + + + T Sbjct: 323 VDVNVHPAKSEVRFRDPGLARGLIVSSLRHALAEAGHRASSTVAGATLGAMRPEQPTATG 382 Query: 355 LPK-YATSLTNTQEKLFLQENRLSTND----------------LLPSDDPTYSEDNDPVE 397 P+ Y + + + S + D Sbjct: 383 APRVYQMDRPSPGARNSSYAAQAPGQPPAPSYPAPPSAEPAGFAEFSGAYSGRLVEDAAV 442 Query: 398 ESEAT---HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 E EA LG A Q+H+NYII+QT DG+VIVDQHAAHERL++EK++ + + Sbjct: 443 EPEAHPVEDLPLGAARGQVHENYIIAQTRDGMVIVDQHAAHERLVYEKLKHQMAENGVAT 502 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL PEI++L +G+CA +++ +DL + G+ E FG +A+A+RE PAIL + N ++R Sbjct: 503 QGLLIPEIVELSDGDCARLLDVADDLAKFGLGIEAFGGSAVAVRETPAILGEVNAEAMIR 562 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 DI+DE+ D + +Q R+E IL+ +AC+GSIRSGR+M+ EMN LLREME P+S QCN Sbjct: 563 DILDELADQGESQLVQARLEAILSRVACHGSIRSGRRMRGEEMNALLREMEATPHSGQCN 622 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRPT+++LKL+DIE+LFGR Sbjct: 623 HGRPTYVELKLADIERLFGR 642 >gi|330873787|gb|EGH07936.1| DNA mismatch repair protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330965979|gb|EGH66239.1| DNA mismatch repair protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 647 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 220/624 (35%), Positives = 348/624 (55%), Gaps = 31/624 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDIDVEQAGIKLLKVRDDGS 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + + +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMDARVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLHEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S ++ + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPENQLGGSVPVAAEPRLTGPDAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQE--------------NRLSTNDLLPSDDPTYSED------ 392 + L Q + F + R +T + Y E Sbjct: 382 GEMRLANNVLEQPQGEPFARPAGSGSGSGYQYQYSPRPTTGVPVAEAQSAYREFFAPLPG 441 Query: 393 --NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 + ES + LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + Sbjct: 442 TTPSALPESPSDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMANE 501 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 ++ Q LL PE I + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 502 GLSGQPLLVPESIAVSQREADCAEEHITTFQRLGFELQRLGPETLAIRQIPALLKQAEAN 561 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME S Sbjct: 562 RLVSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTERS 621 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+ ++ LSD++KLF R Sbjct: 622 GQCNHGRPTWTQMGLSDLDKLFLR 645 >gi|330807229|ref|YP_004351691.1| DNA mismatch repair protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375337|gb|AEA66687.1| DNA mismatch repair protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 637 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 218/625 (34%), Positives = 342/625 (54%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + GG ++ D+G Sbjct: 11 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGG 70 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +VS LTL SR Sbjct: 71 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTLTSRTRDAEQAW 130 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++S +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+R+A+A Sbjct: 131 QVETEGRDMASRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALA 190 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + R+ V G F+ A+ + + N + L G+ G Sbjct: 191 RFDVAFHLRHNGKTILSLHEAHDDAARARRVGAVCGAGFLEQALPIEVERNGLHLWGWVG 250 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y ++NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 251 LPTFSRSQADLQYFYVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAVVDVN 310 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ------DNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ + + P+ Sbjct: 311 VHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPEDQLAAPAAVGGMVRPTGLEAGEFGPQ 370 Query: 353 THLPKYATSLTNTQEKL---------------FLQENRLSTNDLLPSDDPTYSEDNDPVE 397 + A +L + + R +N Y E P+ Sbjct: 371 GEMRLAANALLEQPQPQPSYNTAGSGAGSGYQYQYTPRPQSNVPAAEAQAAYREFFKPLP 430 Query: 398 ES--------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 E+ + LG A AQ+ YI+S+ GLV+VD HAAHER+++E+++ S Sbjct: 431 EAGAAAMPDGQGDIPPLGYALAQLKGIYILSENAQGLVLVDMHAAHERIMYERLKIAMAS 490 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE + + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 491 EGLSGQPLLVPESLAVSQREADCAEEHVAWFQRLGFELQRLGPETLAIRQIPALLKQAEA 550 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME Sbjct: 551 NRLVSDVLADLMEYGTSDRIQAHLNELLGTMACHGAIRANRRLALPEMNGLLRDMENTER 610 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ +L L D++KLF R Sbjct: 611 SGQCNHGRPTWTQLGLDDLDKLFLR 635 >gi|260429288|ref|ZP_05783265.1| DNA mismatch repair protein [Citreicella sp. SE45] gi|260419911|gb|EEX13164.1| DNA mismatch repair protein [Citreicella sp. SE45] Length = 627 Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 252/612 (41%), Positives = 387/612 (63%), Gaps = 21/612 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E IN+IAAGE++ERP+ A+KEL+EN++DA + RV IA GGK+ ++TD+G G Sbjct: 16 IRQLDESAINRIAAGEVVERPASAVKELVENAIDAGARRVAIEIADGGKTLIRVTDDGCG 75 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 M ++E+P+A+ RH TSKI D +IH+FGFRGEALPS+GAV LT+ SR GA+I Sbjct: 76 MRADELPLALSRHATSKIDGSDLLDIHSFGFRGEALPSLGAVGRLTIQSRAAGEE-GAEI 134 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 +++G + +P A+N GT+V +RDLF+ PARL FL++++ E I++VI+R+A+A P Sbjct: 135 SVAGGQTGGAKPCALNGGTVVTLRDLFYATPARLKFLRTDRAEMQAISEVIKRLAMAEPS 194 Query: 182 VSFTFS--TIKSNRYKMNFQSTNGNFPERIS----QVIGEDFINNAVELNEKSNEITLQG 235 V FT + +R +G+ + + QV+G +F +NA+ ++ + L G Sbjct: 195 VGFTLRDVSDGKDRVTFRADPCSGDLFDALRGRMGQVMGAEFTDNALSIDAEREGFRLTG 254 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 +PT++RG++ ++F+NGR VQD+ + +R AYA+ + R+P V L ++ DP +V Sbjct: 255 LAALPTYSRGSSVAQHLFVNGRPVQDRLLHGALRGAYADFLSRERHPAVALFVDCDPHKV 314 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHPAKS +RFR+P I+R I+ +++ A+ + G S+ ++ + + + P Sbjct: 315 DVNVHPAKSEVRFRDPGIVRGLIVSALRHALAEAGHRASTTVAGATLGAMRPEPQPAAAP 374 Query: 356 PKYAT-------------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 Y + + + ++ S D + D E A Sbjct: 375 RVYQMDRPSQGALSSAWRAQAPAPQPYTPPAPQPTSGFAEFSRDYSGRVDVVEEPEQPAE 434 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 LG A Q+H+NYII+QT DG+VIVDQHAAHERL++EK+++ + +Q LL PEI Sbjct: 435 ALPLGAARGQVHENYIIAQTADGVVIVDQHAAHERLVYEKLKRQMAERGVPAQALLIPEI 494 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 ++ + + ++ ++L R+G+ E FG A+A+RE PAIL + N LL DI+DE+ D Sbjct: 495 VEFSADDLSRLLSVADELSRMGLTVEPFGGGAVAVRETPAILGEVNAKALLNDILDELAD 554 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 ++ +Q++IE IL+ +AC+GSIRSGR+M++ EMN LLREME P+S QCNHGRPT+++ Sbjct: 555 YGSSQLVQEKIEAILSRVACHGSIRSGRRMRAEEMNALLREMEATPHSGQCNHGRPTYVE 614 Query: 583 LKLSDIEKLFGR 594 LKLSDIE+LFGR Sbjct: 615 LKLSDIERLFGR 626 >gi|213967922|ref|ZP_03396068.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv. tomato T1] gi|301384442|ref|ZP_07232860.1| DNA mismatch repair protein [Pseudomonas syringae pv. tomato Max13] gi|302064109|ref|ZP_07255650.1| DNA mismatch repair protein [Pseudomonas syringae pv. tomato K40] gi|302132270|ref|ZP_07258260.1| DNA mismatch repair protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927265|gb|EEB60814.1| DNA mismatch repair protein MutL [Pseudomonas syringae pv. tomato T1] Length = 645 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 220/622 (35%), Positives = 347/622 (55%), Gaps = 29/622 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDIDVEQAGIKLLKVRDDGG 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + + +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMDARVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLHEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S + + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPENQLGGSVPVAAEPRPTGPDAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQE------------NRLSTNDLLPSDDPTYSED-------- 392 + L Q + F + R +T + Y E Sbjct: 382 GEMRLANNVLEQPQGEPFARPAGGGSGSGYQYSPRPTTGVPVAEAQSAYREFFAPLPGTT 441 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + ES + LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + + Sbjct: 442 PSALPESPSDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMANEGL 501 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 + Q LL PE I + + E EH RLG + +R GP +AIR+IPA+L + +L Sbjct: 502 SGQPLLVPESIAVSQREADCAEEHITTFQRLGFELQRLGPETLAIRQIPALLKQAEANRL 561 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME S Q Sbjct: 562 VSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTERSGQ 621 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+ ++ LSD++KLF R Sbjct: 622 CNHGRPTWTQMGLSDLDKLFLR 643 >gi|330960091|gb|EGH60351.1| DNA mismatch repair protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 647 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 220/624 (35%), Positives = 349/624 (55%), Gaps = 31/624 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL++NSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLKNSLDSGARRIDVDVEQAGIKLLKVRDDGG 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + RIS + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTAKARRISAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S + + + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPENQLGGSVPVAVEPRPTGPEAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQE--------------NRLSTNDLLPSDDPTYSEDNDPVEE 398 + L Q + F + R +T + Y E P+ Sbjct: 382 GEMRLANNVLEQPQGEAFARPAGGGAGSGYQYQYSPRPTTGVPVAEAQSAYREFFAPLPS 441 Query: 399 --------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 SE+ LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + Sbjct: 442 AAPSSLPGSESDIPPLGYALAQLKGIYILAENAQGLVLVDMHAAHERIMYERLKIAMANE 501 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 ++ Q LL PE + + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 502 GLSGQPLLVPESLAVSQREADCAEEHIATFQRLGFELQRLGPETLAIRQIPALLKQAEAN 561 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME S Sbjct: 562 RLVSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNALLRDMENTERS 621 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+ ++ LSD++KLF R Sbjct: 622 GQCNHGRPTWTQMGLSDLDKLFLR 645 >gi|254466092|ref|ZP_05079503.1| DNA mismatch repair protein MutL [Rhodobacterales bacterium Y4I] gi|206687000|gb|EDZ47482.1| DNA mismatch repair protein MutL [Rhodobacterales bacterium Y4I] Length = 647 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 256/628 (40%), Positives = 385/628 (61%), Gaps = 37/628 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA ++R+ IA GGK+ ++TD+G G Sbjct: 20 IRQLDDSAINRIAAGEVVERPASAVKELVENAIDAGATRITVEIADGGKTLIRVTDDGCG 79 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT +++P+A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR + AQI Sbjct: 80 MTPDDLPLALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLTITSRAAGHE-AAQI 138 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 +SG K+ V+P A+ GT+VE+RDLFF PARL F+++++ E I+D ++R+A+A P Sbjct: 139 RVSGGKLEPVKPAALRAGTVVELRDLFFATPARLKFMRTDRAEAQAISDTVKRLAMAEPS 198 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQ 234 V FT S R +G+ + R++ V+G +F NA++++ I L Sbjct: 199 VGFTLRDVSGGGEGRVTFRADPLSGDLFDALHGRLASVLGREFAENALKIDATREGIRLY 258 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG A ++F+N R V+DK + +R AY + + R+P L ++ DP+ Sbjct: 259 GYAALPTYSRGAAVAQFLFVNTRPVKDKMLTGALRAAYFDFLSRDRHPAAALFVDCDPQL 318 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAKS +RFR+P + R I+ S++ A+ + G S+ ++ + + + + Sbjct: 319 VDVNVHPAKSEVRFRDPGLARGLIVSSLRHALAEAGHRASTTVAGATLGAMKPEQPTASG 378 Query: 355 LPK----------------YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND---- 394 P+ A S Q + +L +E + Sbjct: 379 APRIYQMDRPSYGARSLSYAAQSPGQPQAPSYDAPPSPGFAELAGVYSGRVTEVAEAPTA 438 Query: 395 --------PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 A LG A Q+H+NYII+QT DG+VIVDQHAAHERL++EK+++ Sbjct: 439 PGRPSVPPEASAPGAEQLPLGAARGQVHENYIIAQTADGMVIVDQHAAHERLVYEKLKRQ 498 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 + +Q LL PEI++L + +CA ++ ++L + G+ E FG NAIA+RE PAIL + Sbjct: 499 MAENGVAAQALLIPEIVELSDNDCACLLGVADELAKFGLGIEAFGGNAIAVRETPAILGE 558 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 N +++DI+DE+ D + +Q +IE IL+ +AC+GSIRSGR+M+ EMN LLREME Sbjct: 559 VNAKAMIKDILDELSDQGESQLVQAKIEAILSRVACHGSIRSGRRMRGEEMNALLREMEA 618 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 P+S QCNHGRPT+++LKL+DIE+LFGR Sbjct: 619 TPHSGQCNHGRPTYVELKLADIERLFGR 646 >gi|237798277|ref|ZP_04586738.1| DNA mismatch repair protein [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021129|gb|EGI01186.1| DNA mismatch repair protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 647 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 219/624 (35%), Positives = 347/624 (55%), Gaps = 31/624 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDIDVEQAGIKLLKVRDDGG 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S K + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPENQVGGSVPVAAEPKPTGPDAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQE--------------NRLSTNDLLPSDDPTYSED------ 392 + L Q + F + R ++ + Y E Sbjct: 382 GEMRLANNVLEQPQGEAFARPAGGGSGSGYQYQYSPRPASALPVAEAQSAYREFFAPLPS 441 Query: 393 --NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 + ES + LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + Sbjct: 442 AAPSALPESPSDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMANE 501 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 ++ Q LL PE + + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 502 GLSGQPLLVPESLAVSQREADCAEEHIATFQRLGFELQRLGPETLAIRQIPALLKQAEAN 561 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME S Sbjct: 562 RLVSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTERS 621 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+ ++ LSD++KLF R Sbjct: 622 GQCNHGRPTWTQMGLSDLDKLFLR 645 >gi|222085025|ref|YP_002543554.1| DNA mismatch repair protein [Agrobacterium radiobacter K84] gi|254766153|sp|B9JA11|MUTL_AGRRK RecName: Full=DNA mismatch repair protein mutL gi|221722473|gb|ACM25629.1| DNA mismatch repair protein [Agrobacterium radiobacter K84] Length = 606 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 297/607 (48%), Positives = 415/607 (68%), Gaps = 15/607 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++LSE +INQIAAGE+IERP+ A KELIEN+LDA ++R+E AGGGK+ +++DNG Sbjct: 1 MTIKQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEIATAGGGKALLRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM ++ +A++RHCTSKISD +I T GFRGEALPSIG+V+ L++ SR + GA+ Sbjct: 61 SGMEQADLELAIKRHCTSKISDTLDDIRTLGFRGEALPSIGSVARLSIASRRVGSAGGAE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 IA++G K+ +RP A NPGTIVEVRDLFF PARL FLK+E+ E IT+V++RMAIA+P Sbjct: 121 IAVAGGKVLHLRPAAANPGTIVEVRDLFFATPARLKFLKTEKAEAAAITEVVKRMAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V F S S+R + F +T + R++QV+G+DF +NA+EL+ + ++ L G+ G+P Sbjct: 181 QVRFVLS--GSDRSTLEFPATGDDRLARMAQVLGKDFKDNAIELDAEREDVRLTGFAGVP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGN+ Y F+NGR VQDK ILS IR AYAETIP GRYP+ VL + +DP +DVNVH Sbjct: 239 TFNRGNSAHQYAFVNGRPVQDKLILSAIRGAYAETIPSGRYPIAVLSITLDPALLDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAKS +RFR+P ++R I+ +I++A+ ++G ++ + M+ +F P + Sbjct: 299 PAKSDVRFRDPGLVRGLIVGAIREALAREGDRAATTGADGMLRAFTSGFQPGWRPSAPSA 358 Query: 361 SLTNTQEK------------LFLQENRLSTNDLLPSDDPTYSEDN-DPVEESEATHYQLG 407 T F + + + + L S +P + E + LG Sbjct: 359 PWTPEASPSRPYQPAVTNGYSFRERPQAAFDGLTMPTARAESTPFVEPTQSEEPARFPLG 418 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 A AQ+H+NYI++QT DGLVIVDQHAAHERL+FE+MR+ +S +++SQ LL PEI+DL E Sbjct: 419 AARAQLHENYIVAQTDDGLVIVDQHAAHERLVFEEMRKALHSKRLSSQVLLIPEIVDLPE 478 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 +C +M ++L LG+ ERFGP AIA+RE PA+L + + L+R + DEI + T Sbjct: 479 EDCDRLMVFADELGELGLAIERFGPGAIAVRETPAMLGEVDAQGLIRQLADEIAEWDTAS 538 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 L ++E + ATMAC+GS+RSGR+++ EMN LLR+ME P S QCNHGRPT+I+LKLSD Sbjct: 539 GLAAKLEYVAATMACHGSVRSGRRLRPEEMNALLRQMEATPGSGQCNHGRPTYIELKLSD 598 Query: 588 IEKLFGR 594 IE+LFGR Sbjct: 599 IERLFGR 605 >gi|307825900|ref|ZP_07656115.1| DNA mismatch repair protein MutL [Methylobacter tundripaludum SV96] gi|307733019|gb|EFO03881.1| DNA mismatch repair protein MutL [Methylobacter tundripaludum SV96] Length = 614 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 202/612 (33%), Positives = 344/612 (56%), Gaps = 18/612 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+I L +++NQIAAGE++ERPS +KEL+EN DA +S+V I GG +I DNG Sbjct: 1 MRIHSLPTQLVNQIAAGEVVERPSSVVKELVENCFDAGASQVSIEIEQGGARLIKIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++P+A+ RH TSKI+ D + + GFRGEALPSI +VS LTL+SR + Sbjct: 61 CGIVKEDLPLALSRHATSKIASLKDLEQVVSMGFRGEALPSISSVSRLTLISRISDADCA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 ++ E+ + +P GT ++VRDLF+ PAR FLK+E+ E I +I+RMA+ Sbjct: 121 WRVNADGTEQDFNPQPDPHPQGTTIDVRDLFYNTPARRKFLKTEKTEFAHIETLIKRMAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + F S + + + T +RI+ + G FI N+++++ ++ + L G+ Sbjct: 181 SRFDIGFILSHNQKEIFNLKPAITESEQEQRIAGICGSAFIENSIKIDFAASGLQLTGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+PTF+R + + ++NGR V+DK + ++ AY + + GR+PV VL L +DP VDV Sbjct: 241 GLPTFSRSQQDMQFFYVNGRLVRDKLVSHAVKQAYQDVLFHGRHPVFVLYLTLDPALVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI---------------STSSVLSKKMI 342 N HPAK +RFR ++ +F+ ++ +++ + + + +K Sbjct: 301 NAHPAKLEVRFREGRLVHDFLFSALHRSLADLRPGRNLMQQVEVEALPQTPAVLDAKPNN 360 Query: 343 SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 ++ D+ + P + + L + + + Y + + ++ Sbjct: 361 VAWLNDSVTQQSKPNFDNKTAYSSRSPQQASLPLHVEEAMQAYASLYPKPEPVAQSAQPE 420 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 LG A A +H YI+S+T +G+++VD HAAHER+ +E+++Q + + + +Q LL P Sbjct: 421 ARPLGHAIAHLHNIYILSETPNGIILVDAHAAHERVTYERLKQQYQNGAVPNQPLLLPIK 480 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 I + E L + E + LG + R G I +R IP +L ++ L+RD++ ++I+ Sbjct: 481 IKVSAAEADLAEQEHEFFNTLGFEINRSGLETIVLRSIPVLLGNTDMETLVRDVLADMIE 540 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 + +Q++ ILAT+AC+G++R+ R++ EMN LLR+ME+ QCNHGRPT+++ Sbjct: 541 HGMSQRIQEKSNEILATVACHGAVRAHRRLTIDEMNALLRDMEQTERIGQCNHGRPTWVE 600 Query: 583 LKLSDIEKLFGR 594 L +D++K F R Sbjct: 601 LSTNDLDKFFLR 612 >gi|285017885|ref|YP_003375596.1| DNA mismatch repair protein mutl [Xanthomonas albilineans GPE PC73] gi|283473103|emb|CBA15608.1| probable dna mismatch repair protein mutl [Xanthomonas albilineans] Length = 623 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 212/623 (34%), Positives = 348/623 (55%), Gaps = 31/623 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +INQIAAGE++ERP+ +KEL+EN+LDA + RV+ + GG +I D+G Sbjct: 1 MSIRQLPEILINQIAAGEVVERPASVVKELVENALDAGARRVDVDLEEGGVRLIRIRDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +EE+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TL SR + G Sbjct: 61 SGIPAEELPLAVSRHATSKIASLDDLETVGTLGFRGEALPSIASVSRFTLASRRADDAHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 A + + G K+ +V+P A +PGT VEVR+LF+ +PAR FL++E+ E I + +R +A+A Sbjct: 121 AMLQVEGGKVGAVQPHAQSPGTTVEVRELFYNVPARRKFLRAERTELGHIEEWLRSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V S + + + + +GEDF A+ ++ + L G+ Sbjct: 181 RPDVELRVSHNGKPSRRYKPGDLYSDAR--LGETLGEDFARQALRVDHSGAGLRLHGWIA 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R +A+Q Y+++NGR+V+D+ + ++ AY + + GR P VL LE+DP +VDVN Sbjct: 239 QPHYSRASADQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPSRVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-SSVLSKKMISSFHQDNAPKTHLPK 357 VHPAK +RFR+ +I +F+ +++Q + + + S + + + + P Sbjct: 299 VHPAKHEVRFRDARLIHDFVYRTLQDTLAQTRAGSLPSTAADAPVQTLPTHGSGAGAWPP 358 Query: 358 YATSLTNTQEKLFLQENRLSTN---------------------DLLPSDDPTYSEDND-- 394 S+ + K + R + + D + S D Sbjct: 359 PRASVGGSSGKGEGAQWRSAQSPLGLRVQEAPAAYAALYAASADSGSTAAHLPSPPQDAA 418 Query: 395 ---PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 P ++ LG A AQ+H YI+++ +GL++VD HAAHER+ +E+++ + Sbjct: 419 GGLPPTAPDSGVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKSAHDGIG 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + L LG + R GP ++ +R IPA+L++ Sbjct: 479 LHTQPLLVPITLAVGERDADTAEREAQTLAALGFEVTRSGPQSLHVRSIPALLAQAEPEA 538 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 LLRD++ ++ + + + + +L+TMAC+G++R+ R++ EMN LLR+ME S Sbjct: 539 LLRDVLTDLREHGHSGRVAGARDALLSTMACHGAVRANRRLTLPEMNALLRDMEATERSG 598 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+ + L++I++ F R Sbjct: 599 QCNHGRPTWARFTLAEIDRWFLR 621 >gi|331014608|gb|EGH94664.1| DNA mismatch repair protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 647 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 220/624 (35%), Positives = 347/624 (55%), Gaps = 31/624 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDIDVEQAGIKLLKVRDDGG 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + + +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMDARVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLHEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S + + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPENQLGGSVPVAAEPRPTGPDAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQE--------------NRLSTNDLLPSDDPTYSED------ 392 + L Q + F + R +T + Y E Sbjct: 382 GEMRLANNVLEQPQGEPFARPAGGGSGSGYQYQYSPRPTTGVPVAEAQSAYREFFAPLPG 441 Query: 393 --NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 + ES + LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + Sbjct: 442 TTPSALPESPSDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMANE 501 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 ++ Q LL PE I + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 502 GLSGQPLLVPESIAVSQREADCAEEHITTFQRLGFELQRLGPETLAIRQIPALLKQAEAN 561 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME S Sbjct: 562 RLVSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTERS 621 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+ ++ LSD++KLF R Sbjct: 622 GQCNHGRPTWTQMGLSDLDKLFLR 645 >gi|170723845|ref|YP_001751533.1| DNA mismatch repair protein [Pseudomonas putida W619] gi|229486326|sp|B1JAD6|MUTL_PSEPW RecName: Full=DNA mismatch repair protein mutL gi|169761848|gb|ACA75164.1| DNA mismatch repair protein MutL [Pseudomonas putida W619] Length = 633 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 209/626 (33%), Positives = 340/626 (54%), Gaps = 33/626 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LS ++ NQIAAGE++ERP+ KEL+ENSLD+ + R++ + GG ++ D+G Sbjct: 6 RIQLLSPRLTNQIAAGEVVERPASVAKELLENSLDSGARRIDVEVEQGGVKLLRVRDDGS 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++++++P+A+ RH TSKI + D + + GFRGEAL SI +V+ LTL SR + Sbjct: 66 GISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAW 125 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G ++ +P A GT VEVRDLFF PAR FLK+E+ E + + +VIRR+A+A Sbjct: 126 QVETEGRDMTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F + ++ R+ + G F+ A+ ++ + N + L G+ G Sbjct: 186 RFDVAFHLRHNGKSILSLHEAHDETARARRVGAICGGGFMEQALPIDVERNGLRLWGWVG 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL LE++P VDVN Sbjct: 246 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLELEPNGVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------------------------NKKGISTS 334 VHP K +RFR + +F+ ++ +A+ + G Sbjct: 306 VHPTKHEVRFREGRSVHDFLYGTLHRALADVRPEDHLASAPAAAAEITRPTGQQAGEFGP 365 Query: 335 SVLSKKMISSFHQDNAPKTHLPK------YATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + Q P+ + Y T + + Sbjct: 366 QGEMRLASPVLEQPQVPQHSISNGGSGAGYQYQYTPRPSQPLPAAEAQAVYREFYKPLND 425 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + + +S+ LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ Sbjct: 426 DAAGPATLPQSQGDIPPLGYALAQLKGIYILAENAAGLVLVDMHAAHERIMYERLKVAMA 485 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 S ++ Q LL PE + L + E EH + RLG + +R GP +AIR+IPA+L + Sbjct: 486 SEGLSGQPLLVPESLALSQREADCAEEHAQWFQRLGFELQRLGPETLAIRQIPALLKQAE 545 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 +L++D++ ++++ T+ +Q + +L TMAC+G++R+ R++ EMN LLR+ME Sbjct: 546 ANRLVQDVLADLMEYGTSDRIQAHLNELLGTMACHGAVRANRRLAIPEMNALLRDMENTE 605 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L D++KLF R Sbjct: 606 RSGQCNHGRPTWTQMGLDDLDKLFLR 631 >gi|311695392|gb|ADP98265.1| LOW QUALITY PROTEIN: DNA mismatch repair protein mutL [marine bacterium HP15] Length = 630 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 210/632 (33%), Positives = 346/632 (54%), Gaps = 48/632 (7%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTS 65 LS ++ NQIAAGE++ERP+ +KEL+EN+LDA ++RV+ + GG ++ D+G G+ Sbjct: 2 LSPRLANQIAAGEVVERPASVVKELVENALDAGANRVDVEVEQGGVKLIRVRDDGSGIEE 61 Query: 66 EEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAI 123 +++P+A+ RH TSKI+ DD + + GFRGEAL SI +VS LTL SR +++ + Sbjct: 62 DDLPLALSRHATSKIASLDDLEAVASLGFRGEALASISSVSRLTLTSRTESQEAASRVEV 121 Query: 124 SGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 G ++ + P A GT VEVRDLFF PAR FL++E+ E N + + +RR A++ Sbjct: 122 EGREMDARISPAAHPVGTTVEVRDLFFNTPARRKFLRTEKTEFNHVEECVRRQALSRFDA 181 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 FT + + + + RI + G+ FI+NAV ++ ++ + L G+ +PTF Sbjct: 182 GFTLRHNQRVVQSLRPAESALDRERRIGSLCGQQFIDNAVVIDAEATGLRLWGWVALPTF 241 Query: 243 NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPA 302 +R A+ Y F+NGR ++D+ + +R AY + + R+P VL LE+DP VDVNVHP Sbjct: 242 SRSQADLQYFFVNGRVIRDRLVAHAVRQAYRDVLYNNRHPAFVLYLEVDPATVDVNVHPT 301 Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSL 362 K +RFR+ ++ +FI +++ KA+ + + SF ++ + AT Sbjct: 302 KHEVRFRDGRLVHDFIFRTLHKALA--DVRPDDHFRGAVAQSFGREAVTQGQEAVPATGA 359 Query: 363 TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL---------------- 406 + E + + +S+ + + P +E A+ Sbjct: 360 S--AEAGWNGQPSVSSYGYPGGSGAGFGGQSQPQQEWRASDQMAFYQSLNAGGGSDGQQA 417 Query: 407 ------------------------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 G A AQ+H YI++Q GL++VD HAAHER+ +E+ Sbjct: 418 MPVSDRAATPMPTPPADSDQEPPLGYAIAQLHGIYILAQGRAGLIVVDMHAAHERITYER 477 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 M++ + SQ LL P + + + + H E+L +LG++ ER GP +A+R++PA Sbjct: 478 MKRALAEQDLKSQPLLVPLSLAVSQKKPPT-ESHGEELQKLGLQIERIGPETLAVRQVPA 536 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 +L + QL+RD++ ++I+ + ++ +L TMAC+GS+R+ R++ EMN LLR Sbjct: 537 LLRGADTEQLVRDVLADLIEHGQSDRVEAVTHELLGTMACHGSVRANRQLTIPEMNSLLR 596 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +ME S QCNHGRPT+ + +S+++KLF R Sbjct: 597 DMEATERSGQCNHGRPTWTLVTMSELDKLFLR 628 >gi|294666460|ref|ZP_06731703.1| DNA mismatch repair protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603766|gb|EFF47174.1| DNA mismatch repair protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 625 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 218/625 (34%), Positives = 343/625 (54%), Gaps = 33/625 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +INQIAAGE++ERP+ +KEL+EN+LDA ++RV+ + GG +I DNG Sbjct: 1 MAIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGGVRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+T +E+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TL SR G Sbjct: 61 GGITPDELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLTSRRHDAEHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + I G ++ V P A PGT VEVR+LFF +PAR FL++E+ E I + +R +A+A Sbjct: 121 SALEIDGGRLGEVVPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V S + + + + +G+DF A+ ++ + L G+ Sbjct: 181 RPDVELRVSHNGKPSRRYKPGDLYSDAR--LGETLGDDFARQALRVDHSGAGLRLHGWVA 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R + +Q Y+++NGR+V+D+ + ++ AY + + GR P VL LE+DP +VDVN Sbjct: 239 QPHYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS------------------VLSKK 340 VHPAK +RFR +I +F+ +++Q A+ + + Sbjct: 299 VHPAKHEVRFREARLIHDFVYRTLQDALAQTRAGATPNSIGSDRVGDMGTTSGGMGSLAG 358 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ--ENRLSTNDLLPSDDPTYSEDNDP--- 395 + H ++ S T +Q L L+ E R + L + + Sbjct: 359 GGAPRHGGMPGGSNGTYGYASWTPSQAPLGLRVDEARAAYGALYAPPPSSAQQSAGMPNM 418 Query: 396 ------VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 ++ LG A AQ+H YI+++ +GL++VD HAAHER+ +E+++Q +S Sbjct: 419 VGTGLPATAEDSGVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKQAHDS 478 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 + +Q LL P + + E E E L LG + R GP ++ +R IPA+L+ Sbjct: 479 IGLHAQPLLVPMTLAVGEREADTAEREAETLATLGFEITRAGPQSLHVRSIPALLANAEP 538 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 LLRD++ ++ + + + + +L+TMAC+G++R+ R++ EMN LLR+ME Sbjct: 539 EALLRDVLGDLREHGQSRRIASARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATER 598 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ + LSDI++ F R Sbjct: 599 SGQCNHGRPTWARFTLSDIDRWFLR 623 >gi|294626021|ref|ZP_06704631.1| DNA mismatch repair protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599691|gb|EFF43818.1| DNA mismatch repair protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 625 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 218/625 (34%), Positives = 343/625 (54%), Gaps = 33/625 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +INQIAAGE++ERP+ +KEL+EN+LDA ++RV+ + GG +I DNG Sbjct: 1 MAIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGGVRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+T +E+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TL SR G Sbjct: 61 GGITPDELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLTSRRHDAEHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + I G ++ V P A PGT VEVR+LFF +PAR FL++E+ E I + +R +A+A Sbjct: 121 SALEIDGGRLGEVVPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V S + + + + +G+DF A+ ++ + L G+ Sbjct: 181 RPDVELRVSHNGKPSRRYKPGDLYSDAR--LGETLGDDFARQALRVDHSGAGLRLHGWVA 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R + +Q Y+++NGR+V+D+ + ++ AY + + GR P VL LE+DP +VDVN Sbjct: 239 QPHYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS------------------VLSKK 340 VHPAK +RFR +I +F+ +++Q A+ + + Sbjct: 299 VHPAKHEVRFREARLIHDFVYRTLQDALAQTRAGATPNSIGSDRVGDMGTTSGGMGSLAG 358 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ--ENRLSTNDLLPSDDPTYSEDNDP--- 395 + H ++ S T +Q L L+ E R + L + + Sbjct: 359 GGAPSHGGMPGGSNGTYGYASWTPSQTPLGLRVDEARAAYGALYAPPPSSAQQSAGMPNM 418 Query: 396 ------VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 ++ LG A AQ+H YI+++ +GL++VD HAAHER+ +E+++Q +S Sbjct: 419 AGTGLPATAEDSGVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKQAHDS 478 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 + +Q LL P + + E E E L LG + R GP ++ +R IPA+L+ Sbjct: 479 IGLHAQPLLVPMTLAVGEREADTAEREAETLATLGFEITRAGPQSLHVRSIPALLANAEP 538 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 LLRD++ ++ + + + + +L+TMAC+G++R+ R++ EMN LLR+ME Sbjct: 539 EALLRDVLGDLREHGQSRRIASARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATER 598 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ + LSDI++ F R Sbjct: 599 SGQCNHGRPTWARFTLSDIDRWFLR 623 >gi|159184423|ref|NP_353724.2| DNA mismatch repair protein [Agrobacterium tumefaciens str. C58] gi|25090766|sp|Q8UHI3|MUTL_AGRT5 RecName: Full=DNA mismatch repair protein mutL gi|159139736|gb|AAK86509.2| DNA mismatch repair protein MutL [Agrobacterium tumefaciens str. C58] Length = 606 Score = 561 bits (1446), Expect = e-157, Method: Composition-based stats. Identities = 299/607 (49%), Positives = 413/607 (68%), Gaps = 15/607 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++LSE +INQIAAGE+IERPS A KEL+EN++DA ++R+E AGGGK +ITDNG Sbjct: 1 MAIKQLSETLINQIAAGEVIERPSSATKELVENAIDAGATRIEIATAGGGKGLVRITDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM+ ++ +AV+RHCTSKIS +I T GFRGEALPSIG+V+ LT+ SR G+ Sbjct: 61 SGMSPADLELAVRRHCTSKISTTLDDIRTLGFRGEALPSIGSVAKLTITSRQQGAEQGSV 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I+++G K+S VRP A N GTIVEVRDLFF PARL FLK+E+ E IT+V++RMAIA+P Sbjct: 121 ISVTGGKVSDVRPAASNAGTIVEVRDLFFATPARLKFLKTERAEAAAITEVVKRMAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F S ++R + ST + R++Q++G +F +NA+E++ ++TL G+ G+P Sbjct: 181 HIRFVLS--GTDRSTLEIPSTGDDHLARMAQILGAEFKDNAIEIDAGREDVTLTGFAGVP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGN++ YVF+NGR VQDK +LS IR AYAET+P GRYPV VL + +DP VDVNVH Sbjct: 239 TFNRGNSSHQYVFVNGRPVQDKLLLSAIRGAYAETVPHGRYPVAVLSITLDPAFVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAKS +RFR+P +IR I+ +I++A+ + G ++ + +M+++F +P P + Sbjct: 299 PAKSDVRFRDPGLIRGLIVGAIRQALTRDGDRAATTGASQMMNAFRPGYSPSGLRPSPSA 358 Query: 361 SLTNTQEKL----------FLQENRLSTNDLLP---SDDPTYSEDNDPVEESEATHYQLG 407 + + F + + +D+ +P + + E Y LG Sbjct: 359 TWSAATSPSRPLAVSGDMQFAEAAQSRFSDITMPTARAEPREAYEASQSPSPEPVLYPLG 418 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 A AQ+H+NYII+QT +GLVIVDQHAAHERL+FE+MR +S + SQ LL PEIIDL E Sbjct: 419 AARAQLHENYIIAQTENGLVIVDQHAAHERLVFEEMRNALHSRRPPSQVLLIPEIIDLPE 478 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 +C +M+H LG+ ERFGP AIA+RE PA+L + N+ L+R + DEI + Sbjct: 479 EDCDRLMDHAAGFDALGLVIERFGPGAIAVRETPAMLGEVNVQGLVRQLADEIAEWDAAS 538 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 TL +++E + ATMAC+GS+RSGR+M+ EMN LLR+ME P S QCNHGRPT+I+LKLSD Sbjct: 539 TLANKLEYVAATMACHGSVRSGRRMRPEEMNALLRQMENTPGSGQCNHGRPTYIELKLSD 598 Query: 588 IEKLFGR 594 IE+LFGR Sbjct: 599 IERLFGR 605 >gi|163794888|ref|ZP_02188857.1| DNA mismatch repair protein [alpha proteobacterium BAL199] gi|159179707|gb|EDP64234.1| DNA mismatch repair protein [alpha proteobacterium BAL199] Length = 620 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 236/607 (38%), Positives = 372/607 (61%), Gaps = 18/607 (2%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R+L E ++N+IAAGE++ERP+ A+KEL+ENSLDA + RV+ V+ GG++ Q++D+G G+ Sbjct: 15 RRLPETLVNRIAAGEVVERPASALKELVENSLDAGARRVDVVLRDGGRTLIQVSDDGHGL 74 Query: 64 TSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + + +AV+RH TSK+ DD ++I T GFRGEALPSIGAVS L++ SR +I Sbjct: 75 DPDTLSLAVERHATSKLPDDDLTHISTLGFRGEALPSIGAVSRLSITSRAAGAPAAWRIR 134 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + G + + P A+ GT VE+RDLF+ PARL FLK + E + ++++R+A+A P V Sbjct: 135 VEGGAVGAPEPAALTAGTRVEIRDLFYATPARLKFLKIPRTEQSHALEILQRLAMAAPTV 194 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQGYTG 238 FT S R +N ++ G+ E R+ V+G DF +A+ ++ + L GY G Sbjct: 195 GFTLS--DGTRTLLNLEAAQGDLFEVRLARLGAVLGRDFAADALPIDAERQGYRLTGYAG 252 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PT +R + Y+F+NGR V+D+ +L +R AY + + R+P++ L LE+ +VDVN Sbjct: 253 LPTLHRRTSAHQYLFVNGRPVRDRLLLGAVRGAYMDFVASDRHPMLALFLELPAEEVDVN 312 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD---NAPKTHL 355 VHPAK+ +RFR+ ++R I+ +++ A+ + G S+ + + +F D Sbjct: 313 VHPAKTEVRFRDAGLVRGLIVGALKHALAEAGHRASASVGAATLGAFRPDGLRAHTGHAA 372 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDL--------LPSDDPTYSEDNDPVEESEATHYQLG 407 P + T+ L E + + L + + + A + LG Sbjct: 373 PAWNTARWTPPPSEGLAEAQAAWQAPSTDRVGHTLDFGAAPAARVENAPADPVAERHPLG 432 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 A AQ+H YI++QT DGLVIVDQHAAHERL++E+M+ + SQ LL PE+++L E Sbjct: 433 AARAQVHGTYIVAQTEDGLVIVDQHAAHERLVYERMKDALAVGGVKSQALLLPEVVELEE 492 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 +++ ++ LG+ E FG A+ +RE+PA+L K + L+RD+ D++ + + Sbjct: 493 AAVDRLVQRADEFAELGLVLEAFGQGAVVVREVPALLGKTDTAALIRDLADDLAEVGDAH 552 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 L+DR+ ++ TMAC+GS+R+GR++ EMN LLR+ME P+S QCNHGRPT+++LKL+D Sbjct: 553 ALKDRLADVCGTMACHGSVRAGRRLSGDEMNALLRQMEATPHSGQCNHGRPTYVELKLTD 612 Query: 588 IEKLFGR 594 IE+LFGR Sbjct: 613 IERLFGR 619 >gi|88798917|ref|ZP_01114499.1| DNA mismatch repair protein [Reinekea sp. MED297] gi|88778397|gb|EAR09590.1| DNA mismatch repair protein [Reinekea sp. MED297] Length = 632 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 210/618 (33%), Positives = 339/618 (54%), Gaps = 26/618 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I LS ++ NQIAAGE++ERP+ +KELIENSLDA ++R+E I GG ++ DNG G Sbjct: 13 IAVLSPRLANQIAAGEVVERPASVVKELIENSLDAGATRIEIEIEQGGVKLIRVRDNGRG 72 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A+ RH TSK+ D+ + + GFRGEAL S+ +VS LTL S+P + Q Sbjct: 73 IPQDDLALALARHATSKVYSLDELEALGSLGFRGEALASVASVSRLTLTSKPANQSEAWQ 132 Query: 121 IAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +++ P A GT VEVRDLFF PAR FL++E+ E N + +V++R A++ Sbjct: 133 VQSHGRDMATELAPAAHTDGTTVEVRDLFFNTPARRKFLRTEKTEFNHLEEVVKRQALSR 192 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V+F+ + + T RI+Q++ +F+ NA+ + + + + G+ G+ Sbjct: 193 FDVAFSLRHNNRTIHSLRAAHTQAEQQRRIAQLLKPEFMTNALVVETERAGLRMTGWVGL 252 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF+R + Y F+NGR V+DK I ++ AY + + GR+P VL LE+D VDVNV Sbjct: 253 PTFSRSMPDMQYFFVNGRVVKDKVIGHAVKQAYRDVLYHGRHPCFVLFLELDSSGVDVNV 312 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS--SVLSKKMISSFHQ---------- 347 HP K +RFR+ ++ +F+ + +A+ S M + Sbjct: 313 HPTKHEVRFRDQRLVHDFLFSQLHRALADVRPENDVGSSFDNPMTAPPQPRVSGLEAGEF 372 Query: 348 ------DNAPKTHLPKYATSLTNTQ-----EKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 D P P S + T E++ + + + ++ Sbjct: 373 RGQNHLDMRPSGSGPMVDASASGTSSLGVSEQVSFYQQLQQPGSEAGAANAGFTPQPQLP 432 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 + LG A AQ+H YI+S++ GL+IVD HAAHER+ +E+M+Q ++ + +Q Sbjct: 433 QSETPDMPPLGFAVAQLHGIYILSESEQGLIIVDMHAAHERITYERMKQQYDHQGVQAQP 492 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 LL P + + E E E L + G++ +R GP + +R++P L + ++ L+R + Sbjct: 493 LLVPLALSVSEKEADAAEEFSALLQQFGLELQRSGPEKMTVRQVPVYLQQADVEPLVRSV 552 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 + ++I T+ +Q IL+TMAC+GS+R+ R++ EMN LLR+ME+ S QCNHG Sbjct: 553 LADVIQHETSDAIQAHRNEILSTMACHGSVRANRRLTVPEMNALLRDMERTERSGQCNHG 612 Query: 577 RPTFIKLKLSDIEKLFGR 594 RPT+ +L S+++KLF R Sbjct: 613 RPTWTQLTQSELDKLFLR 630 >gi|58582355|ref|YP_201371.1| DNA mismatch repair protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84624234|ref|YP_451606.1| DNA mismatch repair protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188576161|ref|YP_001913090.1| DNA mismatch repair protein [Xanthomonas oryzae pv. oryzae PXO99A] gi|81311818|sp|Q5GZ85|MUTL_XANOR RecName: Full=DNA mismatch repair protein mutL gi|123739091|sp|Q2P295|MUTL_XANOM RecName: Full=DNA mismatch repair protein mutL gi|238691577|sp|B2SHP8|MUTL_XANOP RecName: Full=DNA mismatch repair protein mutL gi|58426949|gb|AAW75986.1| DNA mismatch repair protein MutL [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368174|dbj|BAE69332.1| DNA mismatch repair protein mutL [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188520613|gb|ACD58558.1| DNA mismatch repair protein MutL [Xanthomonas oryzae pv. oryzae PXO99A] Length = 625 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 215/625 (34%), Positives = 342/625 (54%), Gaps = 33/625 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +INQIAAGE++ERP+ +KEL+EN+LDA ++RV+ + GG +I DNG Sbjct: 1 MAIRQLPEMLINQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGGVRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TL SR G Sbjct: 61 GGIAPDELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLTSRRHDAEHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + I G ++ V P A PGT VEVR+LFF +PAR FL++E+ E I + +R +A+A Sbjct: 121 SALEIDGGRLGEVVPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V S + + + + +GEDF A+ ++ + L G+ Sbjct: 181 RPDVELRVSHNGKPSRRYKPGDLYSDAR--LGETLGEDFARQALRVDHSGAGLRLHGWVA 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R + +Q Y+++NGR+V+D+ + ++ AY + + GR P VL LE+DP +VDVN Sbjct: 239 QPHYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI---------------- 342 VHPAK +RFR +I +F+ +++Q A+ + Sbjct: 299 VHPAKHEVRFREARLIHDFVYRTLQDALAHTRAGATPNSIGSDGAGYTGATAGEMGNIAS 358 Query: 343 --SSFHQDNAPKTHLPKYATSLTNTQEKLFLQ--ENRLSTNDLLPSDDPTYSEDNDPVE- 397 + H + ++ + T +Q L L+ E R + + L + Sbjct: 359 GGPANHGNAPGRSGSAYSYANWTPSQTPLGLRVDEARAAYSALYAPPPRNAPQSTGMPSM 418 Query: 398 --------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 ++ LG A AQ+H YI+++ +GL++VD HAAHER+++E+++ +S Sbjct: 419 AGTGLPATSEDSGVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIVYERLKNAHDS 478 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 + +Q LL P + + E E + L LG + R GP ++ +R IPA+L+ Sbjct: 479 IGLHAQPLLVPMTLAVGEREADTAEREADTLATLGFEITRAGPQSLHVRSIPALLANAEP 538 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 LLRD++ ++ + + + + +L+TMAC+G++R+ R++ EMN LLR+ME Sbjct: 539 EALLRDVLGDLREHGQSCRIASARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATER 598 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ + LSDI++ F R Sbjct: 599 SGQCNHGRPTWARFTLSDIDRWFLR 623 >gi|323135584|ref|ZP_08070667.1| DNA mismatch repair protein MutL [Methylocystis sp. ATCC 49242] gi|322398675|gb|EFY01194.1| DNA mismatch repair protein MutL [Methylocystis sp. ATCC 49242] Length = 602 Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats. Identities = 239/598 (39%), Positives = 362/598 (60%), Gaps = 5/598 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L ++++IAAGE++ERP+ A+KEL+EN+LDA ++R++ I GG+ ++ D+G Sbjct: 5 MPVRRLDPILVDRIAAGEVVERPASAVKELVENALDAGATRIDVAIEEGGRKLIRVIDDG 64 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +AV+RH TSKI D D ++I T GFRGEALPSI AV+ LT+ +R G Sbjct: 65 CGMDENDLALAVERHATSKIPDGDLTHIATLGFRGEALPSIAAVADLTIDTRAQNAPHGF 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + + + GT +E R LF PARL FLK+E+ ET + DV++R+A+A+ Sbjct: 125 SIRVEAGDRRGLTASSWPRGTRIEARALFAATPARLKFLKTERTETAAVVDVVKRLAMAH 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V F FS + + RI+QV+GE+F NA+E++ + + L G Sbjct: 185 PDVRFGFSADNGALFDYPACGDDAAGRARRIAQVLGEEFRANAIEIDAERAGVRLTGLAS 244 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PT+NRGNA YV++NGR V+DK IR AY + + R+PVV L + DPR VDVN Sbjct: 245 LPTYNRGNAQLQYVYVNGRPVRDKLFAGAIRAAYLDFLSPDRHPVVALFIGCDPRIVDVN 304 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK+ +RF +P ++R ++ ++++A+ +K ++ + + +F + NA + P Sbjct: 305 VHPAKAEVRFADPGLVRGLVVGALKQALAEKSHRSADTA-RAAVETFARANAARHDAPWR 363 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL--GIACAQIHQN 416 A N + + D + V E+ A G A AQ+H+ Sbjct: 364 APPPANWDIRHSPHAPSGFAESPQAAFDVGAPAADARVHEAPAQDTDAPLGAARAQLHET 423 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 YII+QT DGLVIVDQHAAHERL++EK+++ T + Q LL P ++DL E + Sbjct: 424 YIIAQTRDGLVIVDQHAAHERLVYEKLKRQREETGVARQMLLIPVVVDLDESRMNALAGA 483 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 ++L LG+ E FGP A+ +RE P+IL + + +L+ DI D + + L R++++ Sbjct: 484 FDELAALGLALEPFGPGAVLVREAPSILGEVDHRRLVEDIADLLAEDGDARGLSRRLDHV 543 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LAT AC+ S+R+GR++ + EMN LLREME P + QCNHGRPT+++LKL+DIEKLFGR Sbjct: 544 LATCACHHSVRAGRRLGAAEMNALLREMETTPGAGQCNHGRPTYVELKLADIEKLFGR 601 >gi|77456749|ref|YP_346254.1| DNA mismatch repair protein [Pseudomonas fluorescens Pf0-1] gi|77380752|gb|ABA72265.1| DNA mismatch repair protein [Pseudomonas fluorescens Pf0-1] Length = 635 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 215/625 (34%), Positives = 345/625 (55%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + GG ++ D+G Sbjct: 9 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGS 68 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++++++P+A+ RH TSKI +D + + GFRGEAL SI +V+ LTL SR + Sbjct: 69 GISADDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRDADQAW 128 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + V+P A GT VEVRDLFF PAR FLK+E+ E + + +VI+R+A+A Sbjct: 129 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALA 188 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + R++ + G F+ A+ + + N + L G+ G Sbjct: 189 RFDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGSGFLEQALPIEIERNGLHLWGWVG 248 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTFNR A+ Y F+NGR V+DK + +R AY + + GR+P L E+DP VDVN Sbjct: 249 LPTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFALFFEVDPAAVDVN 308 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKK-------GISTSSVLSKKMISSFHQDNAP 351 VHP K +RFR+ ++ +F+ ++ +A+ G T++++ + + Sbjct: 309 VHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPEDQLAGSVTTAIVRPTGLEAGEFGPQG 368 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL----- 406 + L A + F + S + PV E++A + + Sbjct: 369 EMRLAANALLEQPQAQPAFNTASGASAGGAYQYQYTPRPQSTVPVAEAQAAYREFFAPLP 428 Query: 407 -----------------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 G A AQ+ YI+S+ GLV+VD HAAHER+++E+++ S Sbjct: 429 EANANALPAGQEDIPPLGYALAQLKGIYILSENAQGLVLVDMHAAHERIMYERLKIAMAS 488 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE + + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 489 EGLSGQPLLVPESLAVSQREADCAEEHAAWFQRLGFELQRLGPETLAIRQIPALLKQAEA 548 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME Sbjct: 549 NRLVGDVLSDLMEYGTSDRIQAHLNELLGTMACHGAIRANRRLALPEMNGLLRDMENTER 608 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ +L L D++KLF R Sbjct: 609 SGQCNHGRPTWTQLGLDDLDKLFLR 633 >gi|21243139|ref|NP_642721.1| DNA mismatch repair protein [Xanthomonas axonopodis pv. citri str. 306] gi|25090749|sp|Q8PJX2|MUTL_XANAC RecName: Full=DNA mismatch repair protein mutL gi|21108659|gb|AAM37257.1| DNA mismatch repair protein MutL [Xanthomonas axonopodis pv. citri str. 306] Length = 625 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 217/625 (34%), Positives = 342/625 (54%), Gaps = 33/625 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +INQIAAGE++ERP+ +KEL+EN+LDA ++RV+ + GG +I DNG Sbjct: 1 MAIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGGVRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+T +E+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TL SR G Sbjct: 61 GGITPDELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLTSRRHDAEHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + I G ++ V P A PGT VEVR+LFF +PAR FL++E+ E I + +R +A+A Sbjct: 121 SALEIDGGRLGEVVPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V S + + + + +G+DF A+ ++ + L G+ Sbjct: 181 RPDVELRVSHNGKPSRRYKPGDLYSDAR--LGETLGDDFARQALRVDHSGAGLRLHGWVA 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R + +Q Y+++NGR+V+++ + ++ AY + + GR P VL LE+DP +VDVN Sbjct: 239 QPHYSRASTDQQYLYVNGRSVRERSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS------KKMISSFHQDNAPK 352 VHPAK +RFR +I +F+ +++Q A+ + +S Sbjct: 299 VHPAKHEVRFREARLIHDFVYRTLQDALAHTRAGATPNSIGGDGTGYTAATSGGMGGIAS 358 Query: 353 THLPKYA------------TSLTNTQEKLFLQ--ENRLSTNDLLPSDDPTYSEDNDP--- 395 +P S T +Q L L+ E R + + L + + Sbjct: 359 GGVPGNGGASIGSGGAYSYASWTPSQTPLGLRVDEARAAYSALYAPPPSSAQQSAGMPNM 418 Query: 396 ------VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 ++ LG A AQ+H YI+++ +GL++VD HAAHER+ +E+++ +S Sbjct: 419 AGTGLPATAQDSGVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKHAHDS 478 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 + +Q LL P + + E E E L LG + R GP ++ +R IPA+L+ Sbjct: 479 IGLHAQPLLVPMTLAVGEREADTAEREAETLATLGFEITRAGPQSLHVRSIPALLANAEP 538 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 LLRD++ ++ + + + + +L+TMAC+G++R+ R++ EMN LLR+ME Sbjct: 539 EALLRDVLSDLREHGQSRRIASARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATER 598 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ + LSDI++ F R Sbjct: 599 SGQCNHGRPTWARFTLSDIDRWFLR 623 >gi|325928077|ref|ZP_08189290.1| DNA mismatch repair protein MutL [Xanthomonas perforans 91-118] gi|325541575|gb|EGD13104.1| DNA mismatch repair protein MutL [Xanthomonas perforans 91-118] Length = 630 Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 222/625 (35%), Positives = 350/625 (56%), Gaps = 33/625 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +INQIAAGE++ERP+ +KEL+EN+LDA ++RV+ + GG +I DNG Sbjct: 6 MAIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGGVRLIRIRDNG 65 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TL SR G Sbjct: 66 GGIAPDELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLTSRRHDAEHG 125 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + I G ++ V P A PGT VEVR+LFF +PAR FL++E+ E I + +R +A+A Sbjct: 126 SALEIDGGRLGEVVPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V S + + + + +G+DF A+ ++ + L G+ Sbjct: 186 RPDVELRVSHNGKPSRRYKPGDLYSDAR--LGETLGDDFARQALRVDHSGAGLRLHGWVA 243 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R + +Q Y+++NGR+V+D+ + ++ AY + + GR P VL LE+DP +VDVN Sbjct: 244 QPHYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVN 303 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISS------------ 344 VHPAK +RFR +I +F+ +++Q A+ + G++ +S+ S Sbjct: 304 VHPAKHEVRFREARLIHDFVYRTLQDALAHTRAGVTPNSIGSDGAGDPGATAGGLGNIAG 363 Query: 345 ---FHQDNAPKTHLPKYA-TSLTNTQEKLFLQ--ENRLSTNDLLPSDDPTYSEDNDPVE- 397 + NAP + Y S T +Q L L+ E R + + L + + Sbjct: 364 SGVPNHGNAPGSSGSGYNYPSWTPSQTPLGLRVDEARAAYSALYAPPPSSAQQSAGMPSM 423 Query: 398 --------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 ++ LG A AQ+H YI+++ +GL++VD HAAHER+ +E+++ +S Sbjct: 424 AGTGLPATAQDSGVPPLGYAVAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKNAHDS 483 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 + +Q LL P + + E E E L LG + R GP ++ +R IPA+L+ Sbjct: 484 IGLHAQPLLVPMTLAVGEREADTAEREAETLATLGFEITRAGPQSLHVRSIPALLANAEP 543 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 LLRD++ ++ + + + + +L+TMAC+G++R+ R++ EMN LLR+ME Sbjct: 544 EALLRDVLGDLREHGQSRRIASARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATER 603 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ + LSDI++ F R Sbjct: 604 SGQCNHGRPTWARFTLSDIDRWFLR 628 >gi|86356494|ref|YP_468386.1| DNA mismatch repair protein [Rhizobium etli CFN 42] gi|123765850|sp|Q2KBX7|MUTL_RHIEC RecName: Full=DNA mismatch repair protein mutL gi|86280596|gb|ABC89659.1| DNA mismatch repair protein [Rhizobium etli CFN 42] Length = 610 Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 300/611 (49%), Positives = 408/611 (66%), Gaps = 19/611 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+LSE +INQIAAGE+IERP+ A KELIEN+LDA ++R+E AGGGK+ +++DNG Sbjct: 1 MAIRQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEIATAGGGKALLRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM + ++ +A++RHCTSKIS+ +I T GFRGEALPSIG+V+ L++ SR + G + Sbjct: 61 SGMDAADLELAIRRHCTSKISETLEDIRTLGFRGEALPSIGSVARLSIASRKRDSAGGHE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 IA++G K+ +RP NPGTIVEVRDLFF PARL FLK+E+ E IT++++RMAIA+P Sbjct: 121 IAVAGGKVLHLRPAGANPGTIVEVRDLFFATPARLKFLKTEKAEAGAITEIVKRMAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F S S+R + F +T + R++QV+G+DF +NA+ L+ EI+L G+ G+P Sbjct: 181 AVRFVLS--GSDRATLEFPATGDDHLARMAQVLGKDFSDNAIALDAVREEISLTGFAGVP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGN+ Y F+NGR VQDK ILS IR AYAETIP GRYPV VL + +DP VDVNVH Sbjct: 239 TFNRGNSAHQYAFVNGRPVQDKLILSAIRGAYAETIPSGRYPVAVLSIALDPALVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY-- 358 PAKS +RFR+P ++R I+ +I++A+ + G ++ + M+ +F P P+ Sbjct: 299 PAKSDVRFRDPGLVRGLIVGAIREALARDGSRAATTGASDMLRAFRPGFQPYGQRPQAPW 358 Query: 359 ----ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND-----------PVEESEATH 403 + S F + + S + L + + PV Sbjct: 359 SAETSPSRPYQPAPAFSERPQASFDGLSTPTARAEPQFSPDPVSPGLASPRPVAPETVGR 418 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 Y LG A AQIH NYI++QT DGLVIVDQHAAHERL+FE MR+ +S ++ SQ LL PEI+ Sbjct: 419 YPLGAARAQIHANYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHSKRLASQVLLIPEIV 478 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 D+ E +C +M H + LG+ ERFGP AIA+RE PA+L + + L+R + DEI + Sbjct: 479 DIPEEDCDRLMLHAAEFAELGLAIERFGPGAIAVRETPAMLGEVDAHGLIRQLADEIAEW 538 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 T L ++E + ATMAC+GS+RSGR+++ EMN LLREME P S QCNHGRPT+I+L Sbjct: 539 DTASGLSAKLEYVAATMACHGSVRSGRRLRPEEMNALLREMEVTPGSGQCNHGRPTYIEL 598 Query: 584 KLSDIEKLFGR 594 KLSDIE+LFGR Sbjct: 599 KLSDIERLFGR 609 >gi|166711797|ref|ZP_02243004.1| DNA mismatch repair protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 625 Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 215/625 (34%), Positives = 340/625 (54%), Gaps = 33/625 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +INQIAAGE++ERP+ +KEL+EN+LDA ++RV+ + GG +I DNG Sbjct: 1 MAIRQLPEMLINQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGGVRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +AV RH TSKI+ DD + T GFRGEALPSI +VS TL SR G Sbjct: 61 GGIAPDELSLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLTSRRHDAEHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + I G ++ V P A PGT VEVR+LFF +PAR FL++E+ E I + +R +A+A Sbjct: 121 SALEIDGGRLGEVVPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V S + + + + +GEDF A+ ++ + L G+ Sbjct: 181 RPDVELRVSHNGKPSRRYKPGDLYSDAR--LGETLGEDFARQALRVDHSGAGLRLHGWVA 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R + +Q Y+++NGR+V+D+ + ++ AY + + GR P VL LE+DP +VDVN Sbjct: 239 QPHYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS--------------- 343 VHPAK +RFR +I +F+ +++Q A+ + + Sbjct: 299 VHPAKHEVRFREARLIHDFVYRTLQDALAHTRAGATPNSIGSDGAGDTGATAGEMGNIAS 358 Query: 344 ---SFHQDNAPKTHLPKYATSLTNTQEKLFLQ--ENRLSTNDLLPSDDPTYSEDNDPVE- 397 + H + + S T +Q L L+ E R + + L + Sbjct: 359 GGLANHGNAPGSSGRAYSYASWTPSQTPLGLRVDEARAAYSALYAPPPRNAPQSTGMPSM 418 Query: 398 --------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 ++ LG A AQ+H YI+++ +GL++VD HAAHER+ +E+++ +S Sbjct: 419 AGTGLPATAEDSGVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKNAHDS 478 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 + +Q LL P + + E E + L LG + R GP ++ +R IPA+L+ Sbjct: 479 IGLHAQPLLVPMTLAVGEREADTAEREADTLATLGFEITRAGPQSLHVRSIPALLANAEP 538 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 LLRD++ ++ + + + + +L+TMAC+G++R+ R++ EMN LLR+ME Sbjct: 539 EALLRDVLGDLREHGQSRRIASARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATER 598 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ + LSDI++ F R Sbjct: 599 SGQCNHGRPTWARFTLSDIDRWFLR 623 >gi|78048158|ref|YP_364333.1| DNA mismatch repair protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123757458|sp|Q3BSD0|MUTL_XANC5 RecName: Full=DNA mismatch repair protein mutL gi|78036588|emb|CAJ24279.1| DNA mismatch repair protein MutL [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 625 Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 220/625 (35%), Positives = 348/625 (55%), Gaps = 33/625 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +INQIAAGE++ERP+ +KEL+EN+LDA ++RV+ + GG +I DNG Sbjct: 1 MAIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGGVRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TL SR G Sbjct: 61 GGIAPDELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLTSRRHDAEHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + I G ++ V P A PGT VEVR+LFF +PAR FL++E+ E I + +R +A+A Sbjct: 121 SALEIDGGRLGEVVPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V S + + + + +G+DF A+ ++ + L G+ Sbjct: 181 RPDVELRVSHNGKPSRRYKPGDLYSDAR--LGETLGDDFARQALRVDHSGAGLRLHGWVA 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R + +Q Y+++NGR+V+D+ + ++ AY + + GR P VL LE+DP +VDVN Sbjct: 239 QPHYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISS------------ 344 VHPAK +RFR +I +F+ +++Q A+ + G++ +S+ S Sbjct: 299 VHPAKHEVRFREARLIHDFVYRTLQDALAHTRAGVTPNSIGSDGAGDPGATAGGLGNIAG 358 Query: 345 ----FHQDNAPKTHLPKYATSLTNTQEKLFLQ--ENRLSTNDLLPSDDPTYSEDNDPVE- 397 H + A + S T +Q L L+ E R + + L + + Sbjct: 359 SGVPNHGNAAGSSGSGYNYASWTPSQTPLGLRVDEARAAYSALYAPPPSSAQQSAGMPSM 418 Query: 398 --------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 ++ LG A AQ+H YI+++ +GL++VD HAAHER+ +E+++ +S Sbjct: 419 AGTGLPATAQDSGVPPLGYAVAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKNAHDS 478 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 + +Q LL P + + E E E L LG + R GP ++ +R IPA+L+ Sbjct: 479 IGLHAQPLLVPMTLAVGEREADTAEREAETLATLGFEITRAGPQSLHVRSIPALLANAEP 538 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 LLRD++ ++ + + + + +L+TMAC+G++R+ R++ EMN LLR+ME Sbjct: 539 EALLRDVLGDLREHGQSRRIASARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATER 598 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ + LSDI++ F R Sbjct: 599 SGQCNHGRPTWARFTLSDIDRWFLR 623 >gi|325923187|ref|ZP_08184872.1| DNA mismatch repair protein MutL [Xanthomonas gardneri ATCC 19865] gi|325546332|gb|EGD17501.1| DNA mismatch repair protein MutL [Xanthomonas gardneri ATCC 19865] Length = 620 Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 213/620 (34%), Positives = 348/620 (56%), Gaps = 28/620 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L + +INQIAAGE++ERP+ +KEL+EN+LDA ++RV+ + GG +I DNG Sbjct: 1 MAIRQLPDILINQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGGVRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TL+SR G Sbjct: 61 GGIPPDELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLVSRRHDAEHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + I G ++ V P A PGT VEVR+LF+ +PAR FL++E+ E I + +R +A+A Sbjct: 121 SALEIEGGRLGEVTPRAHAPGTTVEVRELFYNVPARRKFLRAERTELGHIEEWLRSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V + + + + + +GEDF A+ ++ + L G+ Sbjct: 181 RPDVELRVAHNGKPSRRYKPGDLYSDAR--LGETLGEDFTRQALRVDHSGAGLRLHGWVA 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R + +Q Y+++NGR+V+D+ + ++ AY + + GR P VL LE+DP +VDVN Sbjct: 239 QPHYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKK------------GISTSSVLSKKMISSFH 346 VHPAK +RFR +I +F+ +++Q A+ G S + M ++ + Sbjct: 299 VHPAKHEVRFREARLIHDFVYRTLQDALAHTRAGAMPNSIGTEGTSDTGAAPSGMANTPN 358 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQ--ENRLSTNDLLPSDDPTYSEDNDPVE------- 397 A + + T +Q L L+ E R + + L + + + ++ Sbjct: 359 YGGATGSGGGTGYGNWTPSQTPLGLRVDEARAAYSALYAPPSGSAQQQSAAMQTFSGTGL 418 Query: 398 ---ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 ++ LG A AQ+H YI+++ +GL++VD HAAHER+ +E+++ +S + + Sbjct: 419 PATSHDSGVPPLGYAVAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKNAHDSIGLHA 478 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL P + + E E + L LG + R GP ++ +R IPA+L+ LLR Sbjct: 479 QPLLVPMTLAVGEREADTAEREADTLASLGFEITRAGPQSLHVRSIPALLANAEPEALLR 538 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 D++ ++ + + + + +L+TMAC+G++R+ R++ EMN LLR+ME S QCN Sbjct: 539 DVLGDLREHGQSRRIATARDELLSTMACHGAVRANRRLSVPEMNALLRDMEATERSGQCN 598 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRPT+ + L +I++ F R Sbjct: 599 HGRPTWARFTLGEIDRWFLR 618 >gi|256015004|ref|YP_003105013.1| DNA mismatch repair protein [Brucella microti CCM 4915] gi|255997664|gb|ACU49351.1| DNA mismatch repair protein [Brucella microti CCM 4915] Length = 623 Score = 560 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 273/622 (43%), Positives = 395/622 (63%), Gaps = 28/622 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKIR LSE IINQIAAGE+IERP+ IKEL+EN++DA ++R+E V AGGGK+ ++TDNG Sbjct: 1 MKIRHLSETIINQIAAGEVIERPASVIKELVENAIDAGATRIEVVTAGGGKTLLRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++E+ +AV RHCTSK++DD +I GFRGEALPSIG+VS LTL SRP ++G + Sbjct: 61 SGIPADELALAVSRHCTSKLTDDVHDIRALGFRGEALPSIGSVSKLTLKSRPQDADSGFE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ++G + RP A+N GTIVEVRDLF+ PARL F+K+++ E ITDV++R+ IA+P Sbjct: 121 VCVTGGHLDGPRPTALNRGTIVEVRDLFYATPARLKFMKTDRAEATAITDVVKRIGIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ + ++M + ERI QV+G +F NA+ ++ + + + L G+ GI Sbjct: 181 HIRFSLAGTDRTPFEMPATGTGAEATLERIGQVLGREFGENALAIDAERDGVRLAGFVGI 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTFNRGNA + ++NGR V+DK I +R A+++ I R+PV VL L +DP VDVNV Sbjct: 241 PTFNRGNALHQFAYVNGRPVRDKQIFGALRGAHSDVIARDRHPVAVLFLTLDPALVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-NAPKTHLPKY 358 HPAK+ +RFR+P ++R I+ +I++A+ + GI ++ ++ M+ +F + + P+ Sbjct: 301 HPAKADVRFRDPGLVRGLIVGAIKQALAQSGIRPATSGAEAMLQAFRAEGFGAQQSAPRP 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTY--------------------------SED 392 A S + + R + + Sbjct: 361 ANSYSPASWRTAPPAPRSEWSPQTAHPAHRPLDLQAAPALRENGQAVLGDVAVPAADARA 420 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + E LG A AQIH+NYI++QT D LVIVDQHAAHERL++E ++ ++ I Sbjct: 421 SVAEAPVELMQKPLGAARAQIHENYIVAQTEDSLVIVDQHAAHERLVYEALKNALHARPI 480 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 Q LL PEI+DL E + + H E L R G+ E+FGP AIA+RE PA+L + N+ QL Sbjct: 481 AGQMLLIPEIVDLPEEDAQRLAGHAETLARFGLGVEQFGPGAIAVRETPAMLGEMNVQQL 540 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 +RD+ DEI + T L+ + ++ ATMAC+GS+RSGR+++ EMN LLR+ME P S Sbjct: 541 IRDLADEIAEHDTADGLKAMLHHVAATMACHGSVRSGRRLKPEEMNALLRDMEATPGSGT 600 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+I+LKL+DIE+LFGR Sbjct: 601 CNHGRPTYIELKLTDIERLFGR 622 >gi|56698186|ref|YP_168558.1| DNA mismatch repair protein [Ruegeria pomeroyi DSS-3] gi|56679923|gb|AAV96589.1| DNA mismatch repair protein MutL [Ruegeria pomeroyi DSS-3] Length = 621 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 259/607 (42%), Positives = 384/607 (63%), Gaps = 16/607 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E IN+IAAGE++ERP+ A+KEL+EN++DA ++R+ +A GGK+ +++D+G G Sbjct: 15 IRQLDETAINRIAAGEVVERPASAVKELVENAIDAGATRIAIDLADGGKTLIRVSDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT +++P+A+ RH TSKI D NIHTFGFRGEALPS+G+V LT+ SR I Sbjct: 75 MTPDQLPLALARHATSKIDGSDLLNIHTFGFRGEALPSLGSVGRLTITSRARGAEAAN-I 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 +SG ++ V+P A+ GT+VE+RDLFF PARL F+++++ E + D ++R+A+A P Sbjct: 134 RVSGGRVDPVKPAALRAGTVVELRDLFFATPARLKFMRTDRAEAQAVADTVKRLAMAEPS 193 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNF----PERISQVIGEDFINNAVELNEKSNEITLQ 234 VSFT S R + G+ +R++QV+G +F +NA+ ++ + L Sbjct: 194 VSFTLRDVSGGGEGRLVFRADAETGDLFDALRDRLAQVMGREFTDNALRIDTMREGLRLY 253 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG A Y+F+NGR V+DK + +R AY + + R+P L ++ DP Sbjct: 254 GYAALPTYSRGAAVAQYLFVNGRPVRDKMLTGALRAAYFDFLSRDRHPAAALFIDCDPTL 313 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD------ 348 VDVNVHPAKS +RFR+P + R I+ +++ A+ + G S+ ++ + + + Sbjct: 314 VDVNVHPAKSEVRFRDPGVARGLIVSALRHALAEAGHRASTTVAGATLGAMRPEQTGARI 373 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQ-ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 P + Q F + + S + P +P E+ LG Sbjct: 374 YQMDRPSPAARMASHQAQAPGFAELSSSYSGRMVEPEPGEDARRAEEPPAETPPESLPLG 433 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 A Q+H+NYII+QT DG+VIVDQHAAHERL++EK+++ T + +Q LL PEI++L Sbjct: 434 AARGQVHENYIIAQTADGMVIVDQHAAHERLVYEKLKRQMAETGVAAQALLIPEIVELST 493 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 +CA +++ +DL RLG+ E FG A+A+RE PAIL + +LRDI+DE+ D + Sbjct: 494 ADCARLLDLSDDLARLGLTIEPFGGGAVAVRETPAILGPVDAGAMLRDILDELADQGESA 553 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 TLQ RIE IL+ +AC+GSIRSGR+M+ EMN LLREME P+S QCNHGRPT+++LKLSD Sbjct: 554 TLQARIEAILSRVACHGSIRSGRRMRGEEMNALLREMEATPHSGQCNHGRPTYVELKLSD 613 Query: 588 IEKLFGR 594 IE+LFGR Sbjct: 614 IERLFGR 620 >gi|149200821|ref|ZP_01877796.1| DNA mismatch repair protein [Roseovarius sp. TM1035] gi|149145154|gb|EDM33180.1| DNA mismatch repair protein [Roseovarius sp. TM1035] Length = 611 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 261/601 (43%), Positives = 390/601 (64%), Gaps = 12/601 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L E IN+IAAGE++ERP+ A+KEL+EN+LDA ++R+E A GGK+ +++D+G Sbjct: 14 QIRQLDEGAINRIAAGEVVERPASAVKELVENALDAGATRIEVSYADGGKTLIRVSDDGC 73 Query: 62 GMTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GMT +E+P+A+ RH TSKI D NIH+FGFRGEALPS+GAV LT++SR A+ Sbjct: 74 GMTPDELPLALARHATSKIDGSDLLNIHSFGFRGEALPSLGAVGRLTIVSRA--GAEAAE 131 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ++G ++ +V+P A+N GT+V +RDLF+ PARL F++S++ E I D ++R+A+A P Sbjct: 132 MTVAGGQMGAVKPAALNSGTVVTLRDLFYATPARLKFMRSDRAEAQAIADTVKRLAMAEP 191 Query: 181 KVSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITL 233 V FT S R +G+ + R+++V+G +F NA++++ + L Sbjct: 192 FVGFTLRDVSGGGEGRIVFRADPESGDLFDALHGRLARVLGAEFAENALKIDATREGLRL 251 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 GY +PT+ RG+A Y+F+NGR V+DK + +R AY + + R+P L L DP Sbjct: 252 TGYAALPTYARGSAVAQYLFVNGRPVRDKMLYGALRAAYQDVLSRDRHPAAALFLGCDPT 311 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 VDVNVHPAKS +RFR+P + R I+ ++ A+ + G S+ ++ + +F + A + Sbjct: 312 LVDVNVHPAKSEVRFRDPGLARGLIVSGLRHALAEAGHRASTTVAGATLGAFRAEPAGRI 371 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 + + + + + + S VEE AT LG A AQ+ Sbjct: 372 YQMDRPSPQARSL--AYQAQAPGFADMGADWSARVESAPEPEVEEQPATALPLGAARAQV 429 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H+NYII+QT G+VIVDQHAAHERL++E++++ + I +Q LL PEI+DL E +CAL+ Sbjct: 430 HENYIIAQTETGMVIVDQHAAHERLVYERLKRQMAESGIAAQALLIPEIVDLSEADCALL 489 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 M+H E+L +G+ E FG ++A+RE PAIL N LLRDI+DE+ D + TL+ RI Sbjct: 490 MDHAEELAGMGLGIEPFGSGSLAVRETPAILGTVNAGALLRDILDELQDQGASGTLKLRI 549 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + IL+ +AC+GS+RSGR+M + EMN LLREME+ P S QCNHGRPT+++L+LSDIE+LFG Sbjct: 550 DAILSRVACHGSVRSGRRMSADEMNALLREMERTPMSGQCNHGRPTYVELRLSDIERLFG 609 Query: 594 R 594 R Sbjct: 610 R 610 >gi|227821008|ref|YP_002824978.1| DNA mismatch repair protein [Sinorhizobium fredii NGR234] gi|254766173|sp|C3MGW0|MUTL_RHISN RecName: Full=DNA mismatch repair protein mutL gi|227340007|gb|ACP24225.1| DNA mismatch repair protein MutL [Sinorhizobium fredii NGR234] Length = 600 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 296/601 (49%), Positives = 409/601 (68%), Gaps = 9/601 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++LSE +INQIAAGE+IERP+ A KELIEN+LDA ++R+E AGGGK+ ++TDNG Sbjct: 1 MAIKQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEVATAGGGKTLLRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM+ ++ +A++RHCTSKI D ++I T GFRGEALPSIG+V+ L++ +R GA Sbjct: 61 NGMSPADLELAIRRHCTSKIDDTLTDIRTLGFRGEALPSIGSVARLSITTRTAGAREGAA 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G K SVRP N GT+VEVRDLFF PARL F+K+E+ E I++V+RRMAIA+P Sbjct: 121 ISVIGGKTESVRPSPANVGTVVEVRDLFFATPARLKFMKTEKAEAAAISEVVRRMAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 KV F S S+R + F +T + R++QV+G+DF +NA+ ++ + E L G+ G+P Sbjct: 181 KVRFVVS--GSDRSTLEFPATGDDRLARMAQVLGKDFRDNAIGIDAEREEARLSGFAGVP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGN+ Q Y F+NGR VQDK ILS IR AYAETIP GRYPV VL + +DP VDVNVH Sbjct: 239 TFNRGNSLQQYAFVNGRPVQDKLILSAIRAAYAETIPQGRYPVAVLSIALDPALVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA- 359 PAKS +RFR+P +IR II +I++A+++ G ++ ++ M+ SF + A Sbjct: 299 PAKSDVRFRDPGLIRGLIIGAIREALSRGGDRAATTGAQGMMRSFRPEAYRAEPHRAQAP 358 Query: 360 -TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT-----HYQLGIACAQI 413 T+ T+ + E + + +++ E+ + LG A AQ+ Sbjct: 359 WTAATSPYRPMRFDEPARGFAEAPQAAFQEFAQPAARPAETAPNGTVEPAFPLGAARAQL 418 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H+NYI++QT +GLVIVDQHAAHERL+FE MR +S + +Q LL PEI+DL E +C + Sbjct: 419 HENYIVAQTEEGLVIVDQHAAHERLVFEAMRTALHSRPVPAQALLIPEIVDLAEDDCDRL 478 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 M H E+ RLG+ ERFGP AIA+RE PA+L + + L+R + DE+ + T L R+ Sbjct: 479 MAHAEEFLRLGLSIERFGPGAIAVRETPAMLGEMDASGLVRQLADELAEWDTANGLAGRL 538 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + + ATMAC+GS+RSGR+M+ EMN LLR+ME P S QCNHGRPT+I+LKL+DIE+LFG Sbjct: 539 DYLAATMACHGSVRSGRRMRPEEMNALLRQMEATPGSGQCNHGRPTYIELKLADIERLFG 598 Query: 594 R 594 R Sbjct: 599 R 599 >gi|148553415|ref|YP_001260997.1| DNA mismatch repair protein [Sphingomonas wittichii RW1] gi|166232109|sp|A5V3J3|MUTL_SPHWW RecName: Full=DNA mismatch repair protein mutL gi|148498605|gb|ABQ66859.1| DNA mismatch repair protein MutL [Sphingomonas wittichii RW1] Length = 594 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 226/597 (37%), Positives = 355/597 (59%), Gaps = 7/597 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E ++N+IAAGE++ERP+ A+KEL+ENS+DA + R+ ++ GG S + D+G Sbjct: 1 MSIRRLPEHLVNRIAAGEVVERPASALKELVENSIDAGARRISVSLSEGGLSAIDVADDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +EI +A++RH TSK+ DD + T GFRGEALPSIG+V+ LT+ SR + G Sbjct: 61 CGMTPDEIALALERHATSKLPDDAIEAVTTLGFRGEALPSIGSVADLTIESRVRGAD-GW 119 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ P A+ PGT + V +LF +PAR FL+S + E DVI+R+A+A Sbjct: 120 HRRVDHGELVGEGPAALPPGTRIRVSNLFAKVPARRKFLRSARAEYAACVDVIKRLAMAR 179 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + FT + + + +R++ + D N+V ++ + ++L G G+ Sbjct: 180 PDIGFTLEHEGR---RAILVAPDEQRVDRVAALTDRDLAQNSVAVDFRREAVSLTGVAGL 236 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTFNRG A+ ++F+NGR V+D+ ++ +R AY + + R+PV+ L +E+ QVDVNV Sbjct: 237 PTFNRGVADHQFLFVNGRPVKDRLLIGAVRGAYQDMLARDRHPVIALFVELPGDQVDVNV 296 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ +RFR+P ++R I+ ++ A+++ G + S + ++ P A Sbjct: 297 HPAKTEVRFRDPGLVRGMIVGGLRAALDEAGHRSVQRPSVAALGNWQAGGLPTASSTAPA 356 Query: 360 TSLTNTQEKLFLQENRLSTNDLL--PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 + + S D + + P + + Y +G+A Q+ Y Sbjct: 357 IPNGFAFGAAAERSGQGSVWDRVADFAPAPMARAEPAYSPPPQQASYPMGVARGQVAATY 416 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 I+++ DGLVIVDQHAAHERL+ E+MR+ + Q LL PE+++L E C + Sbjct: 417 IVAEAEDGLVIVDQHAAHERLVLERMRRAMADGGVARQALLLPEVVELDEVGCDRLETRI 476 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 +L +G++ ERFGP A+ +R PA+L + ++ L+ D+ DE+ +L++R++++ Sbjct: 477 AELAEMGLELERFGPKAMLVRATPALLGQGDVHGLIVDLADELAAYDEALSLKERLDHVA 536 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ATMAC+GS+R+GR + EMN LLREME P+S QCNHGRPT+IKL DIEKLFGR Sbjct: 537 ATMACHGSVRAGRTLSVAEMNALLREMEVTPHSGQCNHGRPTWIKLGHGDIEKLFGR 593 >gi|41582282|gb|AAS07896.1| DNA mismatch repair protein mutL [uncultured marine bacterium 463] Length = 624 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 216/620 (34%), Positives = 344/620 (55%), Gaps = 27/620 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LS ++ NQIAAGE++ERP+ +KE++ENSLDA ++RV+ + GG +I DNG Sbjct: 3 KIQRLSTRLANQIAAGEVVERPASVVKEVLENSLDAGATRVDVDVESGGVKLIRIRDNGN 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT-G 118 G+ +++P+A+ RH TSKI+ +D + + GFRGEAL SIG+VS LTL S + + G Sbjct: 63 GIDPDDLPLAMARHATSKITSLEDLEAVGSLGFRGEALASIGSVSRLTLTSNASEQGSEG 122 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + A G + +P GT VEVRDLFF PAR FL++E+ E N + +V++R+A+ Sbjct: 123 SSAACEGRDMEVQVKPAPHPQGTTVEVRDLFFNTPARRKFLRTEKTEFNHLEEVVKRLAL 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+F+ +++ + R++ V G F++ A+ + ++ L G+ Sbjct: 183 SRFDVAFSLRHNGRGIHQLKAGTGQVEQQRRVATVCGPAFMDQAIYIENAASGFKLWGWV 242 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+PTF+R A+ Y F+NGR ++DK I ++ AY + + GR+P VL LE+DP QVDV Sbjct: 243 GLPTFSRSQADLQYFFVNGRVIRDKLIAHAVKQAYRDVLYHGRHPAFVLYLEVDPAQVDV 302 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI---STSSVLSKKMIS----------- 343 NVHP K +RFR+ + NFI S+ +A+ + + L M+S Sbjct: 303 NVHPTKHEVRFRDGRSVHNFIFSSLHRALADVRPTADNPADPLPANMLSTGDGMAINTQT 362 Query: 344 ---------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 ++ T F Sbjct: 363 GEISAQGGLAWGAGQGSAVADAPLQTQPGGGFGSRFAPNTVAPAQGSAQLAAYQQLHPQL 422 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 P + S LG A AQ+ YI+++ GLV+VD HAAHER+ +E+++ + I S Sbjct: 423 PTQGSAEDVPPLGYALAQLKGIYILAENVAGLVLVDMHAAHERITYERLKTARDEEGIRS 482 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL P+ I + + E + E+++ RLG+ G A+ IREIP L ++ QLLR Sbjct: 483 QPLLVPQPIAVSQREVQVASENEDLFKRLGLSVGVAGEEALVIREIPVALRDSDVEQLLR 542 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 D++ ++I+ ++ ++ ++ IL+TMAC+GS+R+ R++ EMN LLR+ME+ S QCN Sbjct: 543 DVLADLIEFGSSERVEAHMDEILSTMACHGSVRANRRLTIPEMNALLRDMEETERSGQCN 602 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRPT+ +++L +++KLF R Sbjct: 603 HGRPTWTQMRLDELDKLFLR 622 >gi|254480864|ref|ZP_05094110.1| DNA mismatch repair protein MutL [marine gamma proteobacterium HTCC2148] gi|214038659|gb|EEB79320.1| DNA mismatch repair protein MutL [marine gamma proteobacterium HTCC2148] Length = 624 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 216/620 (34%), Positives = 344/620 (55%), Gaps = 27/620 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LS ++ NQIAAGE++ERP+ +KE++ENSLDA ++RV+ + GG +I DNG Sbjct: 3 KIQRLSTRLANQIAAGEVVERPASVVKEVLENSLDAGATRVDVDVESGGVKLIRIRDNGN 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT-G 118 G+ +++P+A+ RH TSKI+ +D + + GFRGEAL SIG+VS LTL S + + G Sbjct: 63 GIDPDDLPLAMARHATSKITSLEDLEAVGSLGFRGEALASIGSVSRLTLTSNASEQGSEG 122 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + A G + +P GT VEVRDLFF PAR FL++E+ E N + +V++R+A+ Sbjct: 123 SSAACEGRDMEVQVKPAPHPQGTTVEVRDLFFNTPARRKFLRTEKTEFNHLEEVVKRLAL 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+F+ +++ + R++ V G F++ A+ + ++ L G+ Sbjct: 183 SRFDVAFSLRHNGRGIHQLKAGTGQVEQQRRVATVCGPAFMDQAIYVENAASGFKLWGWV 242 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+PTF+R A+ Y F+NGR ++DK I ++ AY + + GR+P VL LE+DP QVDV Sbjct: 243 GLPTFSRSQADLQYFFVNGRVIRDKLIAHAVKQAYRDVLYHGRHPAFVLYLEVDPAQVDV 302 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI---STSSVLSKKMIS----------- 343 NVHP K +RFR+ + NFI S+ +A+ + + L M+S Sbjct: 303 NVHPTKHEVRFRDGRSVHNFIFSSLHRALADVRPTADNPADPLPANMLSTGDGMAINTQT 362 Query: 344 ---------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 ++ T F Sbjct: 363 GEISAQGGLAWGAGQGSAVADAPLQTQPGGGFGSRFAPNTVAPAQGSAQLAAYQQLHPQL 422 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 P + S LG A AQ+ YI+++ GLV+VD HAAHER+ +E+++ + I S Sbjct: 423 PTQGSAEDVPPLGYALAQLKGIYILAENVAGLVLVDMHAAHERITYERLKTARDEEGIRS 482 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL P+ I + + E + E+++ RLG+ G A+ IREIP L ++ QLLR Sbjct: 483 QPLLVPQPIAVSQREVQVASENEDLFKRLGLSVGVAGEEALVIREIPVALRDSDVEQLLR 542 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 D++ ++I+ ++ ++ ++ IL+TMAC+GS+R+ R++ EMN LLR+ME+ S QCN Sbjct: 543 DVLADLIEFGSSERVEAHMDEILSTMACHGSVRANRRLTIPEMNALLRDMEETERSGQCN 602 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRPT+ +++L +++KLF R Sbjct: 603 HGRPTWTQMRLDELDKLFLR 622 >gi|115523441|ref|YP_780352.1| DNA mismatch repair protein [Rhodopseudomonas palustris BisA53] gi|122297082|sp|Q07RR2|MUTL_RHOP5 RecName: Full=DNA mismatch repair protein mutL gi|115517388|gb|ABJ05372.1| DNA mismatch repair protein MutL [Rhodopseudomonas palustris BisA53] Length = 603 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 247/606 (40%), Positives = 375/606 (61%), Gaps = 16/606 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E I+N+IAAGE++ERP+ +KEL+EN+LDA ++R+E GGG+ ITD+G Sbjct: 1 MPVRQLPETIVNRIAAGEVVERPASVVKELVENALDAGANRIEVFSDGGGRRRIAITDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT ++ +AV RH TSK+ D D I T GFRGEALPSIG+V+ L++ +R + Sbjct: 61 GGMTRADLELAVDRHATSKLDDEDLLAIRTLGFRGEALPSIGSVAKLSITTRHTEEPHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A+ G S + P A++ GT VEV DLF+ PARL FLK+++ E I +V+RR+A+A Sbjct: 121 ALAVEGGTKSPLVPAALSQGTRVEVSDLFYATPARLKFLKTDRTEAEAIREVVRRLAMAR 180 Query: 180 PKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V+FT S + R+S ++G +F +A+E+ + + + ++G+ G Sbjct: 181 PDVAFTLSGEERAPVSWAAVLPGAAGRLTRLSDILGAEFRKSAIEVRSERDGVVVEGFAG 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P+ R NA Y+F+NGR V+D+ I+ +R AYA+ +P R+PV+ L + DP +VD N Sbjct: 241 APSLTRANALGQYLFVNGRPVRDRLIIGAVRAAYADYLPRDRHPVLALFVTCDPHEVDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI-STSSVLSKKMISSFHQDNAPKTH--- 354 VHPAK+ +RFR+ ++R I+ +++ ++++G S ++ + +++F AP Sbjct: 301 VHPAKTEVRFRDAGLVRALIVHALKDGLSREGQRSAAASVDGATLAAFRPGFAPPPRANW 360 Query: 355 ----LPKYATSLTNTQE--KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 P Y + +N + F + + + LPS D N +E LG Sbjct: 361 DWRRSPSYPIAGSNAMDMAPGFAEREQAGFDVGLPSADV----RNYAAPAAELIDRPLGA 416 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 A QIH+ YI++QT GLVIVDQHAAHERL++EK++ S + Q LL PEI++L E Sbjct: 417 ARTQIHETYIVAQTRTGLVIVDQHAAHERLVYEKLKASMASNGVQRQLLLIPEIVELDEA 476 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 +++ E+L G+ + FGP A+A+RE+PA+L K N LLRD+ + + + Sbjct: 477 TVEQLLDRAEELCSFGLAIDSFGPGAVAVREVPALLGKANAASLLRDLAEHMAEWDEALP 536 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 L+ R+ ++ ATMAC+GS+R+GR ++ EMN LLREME PNS QCNHGRPT+++L LSDI Sbjct: 537 LERRLLHVAATMACHGSVRAGRILKPEEMNALLREMEATPNSGQCNHGRPTYVELTLSDI 596 Query: 589 EKLFGR 594 EKLFGR Sbjct: 597 EKLFGR 602 >gi|94500524|ref|ZP_01307055.1| DNA mismatch repair protein [Oceanobacter sp. RED65] gi|94427314|gb|EAT12293.1| DNA mismatch repair protein [Oceanobacter sp. RED65] Length = 634 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 215/630 (34%), Positives = 354/630 (56%), Gaps = 37/630 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R+E GG +I DNG Sbjct: 3 RIHVLSPRLANQIAAGEVVERPANVVKELVENSLDAGATRIEVDAEQGGVKLIRIRDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+++ RH TSKI D D ++ + GFRGEAL SI +VS L+L S ++ Sbjct: 63 GIEKDDLPLSLSRHATSKIVDLDDLESVQSLGFRGEALASIASVSRLSLSSHEQESELAY 122 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G +++ +P A GT VE+RDLFF PAR FL++E+ E N + +V++RMA++ Sbjct: 123 QVTAEGRDMATEVKPCAHPVGTTVEMRDLFFNTPARRKFLRTEKTEFNHLEEVVKRMALS 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 VSF + + S+ + +RI+ ++ F+ AV ++ ++ + L G+ G Sbjct: 183 RYDVSFQLRHNNKVIHSLRPCSSAFDQEKRIATLLSAQFMKEAVRIDMEAAGLKLWGWVG 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTFNR A+ Y F+NGR V+DK + IR AY + + GR+ VL LE+DP VDVN Sbjct: 243 LPTFNRSQADMQYFFVNGRIVRDKLVAHAIRQAYQDVLYHGRHSAFVLYLELDPALVDVN 302 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-------------------- 338 VHP K +RFR+ ++ +F+ +++ KA+ + T S Sbjct: 303 VHPTKHEVRFRDGRLVHDFLFRTLHKALGEVRPETPSTDHAIPGQLQGQSQVSGIEAGEF 362 Query: 339 --KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS------------ 384 + ++ L + N E +QE + +L + Sbjct: 363 AGQNAMALSQVQGQSSNALTQSQPWQANRPEPGQVQEQMAAYQNLYQAPPADSGLANQPI 422 Query: 385 DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 + +E++ LG A AQ+H YI+SQ GLV+VD HAAHER+ +E+++ Sbjct: 423 QSNPFQTQPQATDENQQDIPPLGYAIAQLHGIYILSQNQHGLVVVDMHAAHERITYERLK 482 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 +++ I SQ LL PE I + + + +H+ D+ +LG + +R GP ++ IR++P +L Sbjct: 483 MTYDAQGIQSQPLLVPETIHVSVEQADIAEQHEADIQKLGFQLQRLGPESLVIRQMPVLL 542 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 NI L+ ++++ + ++ + + IL++MAC+GS+R+ R++ EMN LLR+M Sbjct: 543 KNANIEHLVVKVLEDYRTAGSSRHMTEFRNEILSSMACHGSVRANRQLTIAEMNGLLRDM 602 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 E+ S QCNHGRPT+ +L +++++KLF R Sbjct: 603 EQTERSGQCNHGRPTWTQLSMNELDKLFLR 632 >gi|299134224|ref|ZP_07027417.1| DNA mismatch repair protein MutL [Afipia sp. 1NLS2] gi|298590971|gb|EFI51173.1| DNA mismatch repair protein MutL [Afipia sp. 1NLS2] Length = 598 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 234/597 (39%), Positives = 372/597 (62%), Gaps = 3/597 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E+I+N+IAAGE++ERP+ A+KEL+EN++DA +R++ GGG+ ITD+G Sbjct: 1 MPVRQLPEQIVNRIAAGEVVERPASAVKELVENAIDAGGTRIDIFTEGGGRRRIAITDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT ++ +AV+RH TSK+ D D I T GFRGEALPSIG+V+ L + +R Sbjct: 61 SGMTRGDLALAVERHATSKLDDEDLLRIRTLGFRGEALPSIGSVAKLAITTRHANEPHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + S + P A+ GT VEV DLF+ PARL FLK+++ E I +V+RR+A+A Sbjct: 121 ALQVDAGTKSGIAPAALAHGTRVEVNDLFYATPARLKFLKTDRTEAEAIREVVRRLAMAR 180 Query: 180 PKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P ++FT + + R+ ++G DF +A+E++ + ++++G+ Sbjct: 181 PDIAFTLAGEERAPVTWAAALPGAAGRLTRLGDILGSDFRTHAIEVSAEREGVSVEGFAA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P+ R NA Y+F+NGR V+DK IL +R AYA+ +P R+P+V L + +DP++VD N Sbjct: 241 APSLTRANALGQYLFVNGRPVRDKLILGAVRAAYADYLPRDRHPIVALFVTLDPQEVDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS-SFHQDNAPKTHLPK 357 VHPAK+ +RFRN ++R I+ ++++ + ++G T++ + I+ +FH+++ P++ Sbjct: 301 VHPAKTEVRFRNAGLVRALIVHALKEGLAREGRRTAANTNGAAITTAFHREDLPRSGYDW 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 ++ + + + P+ SEA + LG A Q+H+NY Sbjct: 361 RSSPAAPFAPRASAMAFAEAPQAAFDAYTPSADARGHDAPLSEAVNQPLGAARTQLHENY 420 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 I++QT DGL++VDQHAAHER+++E+++ + Q LL PEI+++ E ++ Sbjct: 421 IVAQTNDGLILVDQHAAHERIVYERLKASLEKNGVQRQMLLIPEIVEMDEAVVEKLLART 480 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 +L + G+ E FGP A+A+RE P++L K N LLRD+ + + + L+ R+ ++ Sbjct: 481 GELEKYGLAIESFGPGAVAVRETPSLLGKTNAASLLRDLAEHMAEWDEALPLERRLMHVA 540 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ATMAC+GS+RSGR ++ EMN LLREME PNS QCNHGRPT+++LKL+DIEKLFGR Sbjct: 541 ATMACHGSVRSGRILKVEEMNALLREMEATPNSGQCNHGRPTYVELKLADIEKLFGR 597 >gi|39937431|ref|NP_949707.1| DNA mismatch repair protein [Rhodopseudomonas palustris CGA009] gi|81829456|sp|Q6N1N4|MUTL_RHOPA RecName: Full=DNA mismatch repair protein mutL gi|39651290|emb|CAE29812.1| DNA mismatch repair protein MutL [Rhodopseudomonas palustris CGA009] Length = 595 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 234/599 (39%), Positives = 366/599 (61%), Gaps = 10/599 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E I+N+IAAGE++ERP+ +KEL+EN++DA +SR++ GGG+ I D+G Sbjct: 1 MPVRQLPETIVNRIAAGEVVERPASVVKELVENAIDAGASRIDIFSDGGGRRKIVIADDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT ++ +AV RH TSK+ D D I T GFRGEALPSIGAV+ L++ +R Sbjct: 61 SGMTQADLALAVDRHATSKLDDEDLLQIRTLGFRGEALPSIGAVARLSITTRHAAEPHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + + P A+ GT VEV DLFF PARL FLK+++ E I +V+RR+A+A Sbjct: 121 ALRVEGGDKTPIAPAALTQGTRVEVADLFFATPARLKFLKTDRTEAEAIREVVRRLAMAR 180 Query: 180 PKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V+FT + + R+ ++G DF NA+E+ + + ++G+ Sbjct: 181 PDVAFTLAGEERAPVTWAAALPGAPGQLIRLGDILGADFRANAIEVRAEREGVVVEGFAA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P+ + NA Y+F+NGR V+DK IL +R AY++ +P R+PVV L + +D R+VD N Sbjct: 241 APSLTKANALGQYLFVNGRPVRDKLILGAVRAAYSDYLPRDRHPVVALFVTLDAREVDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK+ +RFRN ++R I+ +++ + ++G T++ + +IS+F + P + Sbjct: 301 VHPAKTEVRFRNSGLVRALIVHALKDGLAREGRRTAANSASSVISTFRPASMPPANWDWR 360 Query: 359 ATSLTN---TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 ++ + F + + + + PS D E + LG A QIH+ Sbjct: 361 SSPSYPVGGSAAPSFAERAQAAFDVGAPSADIRPQEVT-----PDLLDRPLGAARTQIHE 415 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 YI+SQT DGL+++DQHAAHER+++E+++ + + Q LL P+I+++ E ++ Sbjct: 416 TYIVSQTRDGLIVIDQHAAHERIVYERLKASLEANGVQRQILLIPDIVEMDEATVERLVA 475 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 E+L + G+ E FGP A+A+RE P++L K + LLRD+ + + + L+ R+ + Sbjct: 476 RAEELAQFGLVIESFGPGAVAVRETPSLLGKTDASGLLRDLAEHMAEWDEALPLERRLMH 535 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + ATMAC+GS+R+GR ++ EMN LLREME PNS QCNHGRPT+++L L+DIEKLFGR Sbjct: 536 VAATMACHGSVRAGRVLKPEEMNALLREMEATPNSGQCNHGRPTYVELTLADIEKLFGR 594 >gi|316935889|ref|YP_004110871.1| DNA mismatch repair protein MutL [Rhodopseudomonas palustris DX-1] gi|315603603|gb|ADU46138.1| DNA mismatch repair protein MutL [Rhodopseudomonas palustris DX-1] Length = 595 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 236/599 (39%), Positives = 370/599 (61%), Gaps = 10/599 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E I+N+IAAGE++ERP+ +KEL+EN++DA +SR++ GGG+ I D+G Sbjct: 1 MPVRQLPETIVNRIAAGEVVERPASVVKELVENAIDAGASRIDIFSDGGGRRKIVIADDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT+ ++ +AV RH TSK+ D D I T GFRGEALPSIGAV+ L++ +R Sbjct: 61 SGMTAVDLALAVDRHATSKLDDEDLLAIRTLGFRGEALPSIGAVARLSITTRHASEPHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + + P A++ GT VEV DLFF PARL FLK+++ E I +V+RR+A+A Sbjct: 121 AMRVEGGDKTPIAPAALSQGTRVEVADLFFATPARLKFLKTDRTEAEAIREVVRRLAMAR 180 Query: 180 PKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V+FT + + R+ ++G DF NA+E+ + + ++G+ Sbjct: 181 PDVAFTLAGEERAPVTWAAALPGAPGQLIRLGDILGADFRANAIEVRAEREGVVVEGFAA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P+ R NA Y+F+NGR V+DK IL +R AY++ +P R+PVV L + +D R+VD N Sbjct: 241 APSLTRANALGQYLFVNGRPVRDKLILGAVRAAYSDYLPRDRHPVVALFVTLDSREVDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK+ +RFRN ++R I+ ++++ + ++G T++ + +IS+F + P + Sbjct: 301 VHPAKTEVRFRNAGLVRALIVHALKEGLAREGRRTAANSASSVISTFRPASMPPANWDWR 360 Query: 359 ATSLTN---TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 A+ + F + + + + PS D +E + LG A QIH+ Sbjct: 361 ASPSYPVGGSAAPSFAERAQAAFDVGAPSADIRLTEVT-----PDLLDRPLGAARTQIHE 415 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 YI+SQT DGL+++DQHAAHER+++E+++ + + Q LL P+I+++ E ++ Sbjct: 416 TYIVSQTRDGLIVIDQHAAHERIVYERLKASLEANGVQRQILLIPDIVEMDEATVERLVA 475 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 E+L + G+ E FGP A+A+RE P++L K + LLRD+ + + + L+ R+ + Sbjct: 476 RAEELAKFGLVIESFGPGAVAVRETPSLLGKTDAGGLLRDLAEHMAEWDEALPLERRLMH 535 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + ATMAC+GS+R+GR ++ EMN LLREME PNS QCNHGRPT+++L L+DIEKLFGR Sbjct: 536 VAATMACHGSVRAGRVLKPEEMNALLREMEATPNSGQCNHGRPTYVELTLADIEKLFGR 594 >gi|163844405|ref|YP_001622060.1| DNA mismatch repair protein [Brucella suis ATCC 23445] gi|189030393|sp|A9WXS2|MUTL_BRUSI RecName: Full=DNA mismatch repair protein mutL gi|163675128|gb|ABY39238.1| DNA mismatch repair protein MutL [Brucella suis ATCC 23445] Length = 623 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 272/622 (43%), Positives = 395/622 (63%), Gaps = 28/622 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ IKEL+EN++DA ++R+E V AGGGK+ ++TDNG Sbjct: 1 MTIRHLSETIINQIAAGEVIERPASVIKELVENAIDAGATRIEVVTAGGGKTLLRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++E+ +AV RHCTSK++DD +I GFRGEALPSIG+VS LTL SRP ++G + Sbjct: 61 SGIPADELALAVSRHCTSKLTDDVHDIRALGFRGEALPSIGSVSKLTLKSRPQDADSGFE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ++G + RP A+N GTIVEVRDLF+ PARL F+K+++ E ITDV++R+ IA+P Sbjct: 121 VCVTGGHLDGPRPTALNRGTIVEVRDLFYATPARLKFMKTDRAEATAITDVVKRIGIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ + ++M + ERI QV+G +F NA+ ++ + + + L G+ GI Sbjct: 181 HIRFSLAGTDRTPFEMPATGTGAEATLERIGQVLGREFGENALAIDAERDGVRLAGFVGI 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNRGNA + ++NGR V+DK I +R AY++ I R+PV VL L +DP VDVNV Sbjct: 241 PSFNRGNALHQFAYVNGRPVRDKQIFGALRGAYSDVIARDRHPVAVLFLTLDPALVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-NAPKTHLPKY 358 HPAK+ +RFR+P ++R I+ +I++A+ + GI ++ ++ M+ +F + + P+ Sbjct: 301 HPAKADVRFRDPGLVRGLIVGAIKQALAQSGIRPATSGAEAMLQAFRAEGFGAQQSAPRP 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTY--------------------------SED 392 A S + + R + + Sbjct: 361 ANSYSPASWRTAPPAPRSEWSPQTAHPAHRPLDLQAAPALRENGQAVLGDVAVPAADARA 420 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + E LG+A AQIH+NYI++QT D LVIVDQHAAHERL++E ++ ++ I Sbjct: 421 SVAEAPVELMQKPLGVARAQIHENYIVAQTEDSLVIVDQHAAHERLVYEALKNALHARPI 480 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 Q LL PEI+DL E + + H E L R G+ E+FGP AIA+RE PA+L + N+ QL Sbjct: 481 AGQMLLIPEIVDLPEEDAQRLAGHAETLARFGLGVEQFGPGAIAVRETPAMLGEMNVQQL 540 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 +RD+ DEI + T L+ + ++ ATMAC+GS+RSGR+++ EMN LLR+ME P S Sbjct: 541 IRDLADEIAEHDTADGLKAMLHHVAATMACHGSVRSGRRLKPEEMNALLRDMEATPGSGT 600 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+I+LKL+DIE+LFGR Sbjct: 601 CNHGRPTYIELKLTDIERLFGR 622 >gi|126738320|ref|ZP_01754041.1| DNA mismatch repair protein [Roseobacter sp. SK209-2-6] gi|126720817|gb|EBA17522.1| DNA mismatch repair protein [Roseobacter sp. SK209-2-6] Length = 653 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 257/627 (40%), Positives = 389/627 (62%), Gaps = 35/627 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA + R+ IA GGK+ ++TD+G Sbjct: 27 QIRQLDDSAINRIAAGEVVERPASAVKELVENAIDAGAHRITVEIADGGKTLIRVTDDGC 86 Query: 62 GMTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM++E++P+A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR ++ AQ Sbjct: 87 GMSAEDLPLALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLTITSRAAGHD-AAQ 145 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I +SG ++ V+P A+ GT+VE+RDLF+ PARL F+++++ E I DVI+R+A+A P Sbjct: 146 IKVSGGRMDPVKPAALRAGTVVELRDLFYATPARLKFMRTDRAEAQAIGDVIKRLAMAEP 205 Query: 181 KVSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITL 233 V FT S R +G+ + R++ V+G +F NA++++ + + L Sbjct: 206 SVGFTLRDVSGGGEGRVTFRADPLSGDLFDALHGRLASVLGREFAENALKIDAEREGVRL 265 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 GY +PT++RG A ++F+N R V+DK + +R AY + + R+P L ++ DP Sbjct: 266 FGYAALPTYSRGAAVAQFLFVNSRPVKDKMLTGALRAAYFDFLSRDRHPAAALFIDCDPT 325 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 VDVNVHPAKS +RFR+P + R I+ +++ A+ + G S+ ++ + + + + Sbjct: 326 LVDVNVHPAKSEVRFRDPGVARGLIVSALRHALAEAGHRASTTVAGATLGAMRPEAPTAS 385 Query: 354 HLPKY------------------------ATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 P+ A S + F + + +L Sbjct: 386 GAPRVYQMDRPSFGARNASYAAQSPGQPLAQSADAPPSQGFAELATAYSGRVLEETAEAP 445 Query: 390 SEDNDPVEESE--ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 + D S A LG A Q+H+NYII+QT DG+VIVDQHAAHERL++E+++ Sbjct: 446 GQMPDAPTTSSPGAEELPLGAARGQVHENYIIAQTRDGMVIVDQHAAHERLVYERLKAQM 505 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + +Q LL PEI++L E +CA ++ H EDL + G+ E FG NA+A+RE PA+L + Sbjct: 506 AENGVAAQALLIPEIVELGESDCARLLSHAEDLKKFGLTLEAFGGNAVAVRETPALLGEV 565 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 N ++RDI+DE+ D + +Q R+E IL+ +AC+GSIRSGR+M+ EMN LLREME Sbjct: 566 NAGAMVRDILDELDDLGESQLVQARLEAILSRVACHGSIRSGRRMRGEEMNALLREMEAT 625 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 P+S QCNHGRPT+++LKL+DIE+LFGR Sbjct: 626 PHSGQCNHGRPTYVELKLADIERLFGR 652 >gi|254712072|ref|ZP_05173883.1| DNA mismatch repair protein [Brucella ceti M644/93/1] gi|254715142|ref|ZP_05176953.1| DNA mismatch repair protein [Brucella ceti M13/05/1] gi|261216852|ref|ZP_05931133.1| DNA mismatch repair protein mutL [Brucella ceti M13/05/1] gi|261319719|ref|ZP_05958916.1| DNA mismatch repair protein mutL [Brucella ceti M644/93/1] gi|260921941|gb|EEX88509.1| DNA mismatch repair protein mutL [Brucella ceti M13/05/1] gi|261292409|gb|EEX95905.1| DNA mismatch repair protein mutL [Brucella ceti M644/93/1] Length = 623 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 272/622 (43%), Positives = 394/622 (63%), Gaps = 28/622 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ IKEL+EN++DA ++R+E V AGGGK+ ++TDNG Sbjct: 1 MTIRHLSETIINQIAAGEVIERPASVIKELVENAIDAGATRIEVVTAGGGKTLLRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++E+ +AV RHCTSK++DD +I GFRGEALPSIG+VS LTL SRP ++G + Sbjct: 61 SGIPADELALAVSRHCTSKLTDDVHDIRALGFRGEALPSIGSVSKLTLKSRPQDADSGFE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ++G + RP A+N GTIVEVRDLF+ PARL F+K+++ E ITDV++R+ IA+P Sbjct: 121 VCVTGGHLDGPRPTALNRGTIVEVRDLFYATPARLKFMKTDRAEATAITDVVKRIGIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ + ++M + ERI QV+G +F NA+ ++ + + + L G+ GI Sbjct: 181 HIRFSLAGTDRTPFEMPATGTGAEATLERIGQVLGREFGENALAIDAERDGVRLAGFVGI 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNRGNA + ++NGR V+DK I +R AY++ I R+PV VL L +DP VDVNV Sbjct: 241 PSFNRGNALHQFAYVNGRPVRDKQIFGALRGAYSDVIARDRHPVAVLFLTLDPALVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-NAPKTHLPKY 358 HPAK+ +RFR+P ++R I+ +I++A+ + GI ++ ++ M+ +F + + P+ Sbjct: 301 HPAKADVRFRDPGLVRGLIVGAIKQALAQSGIRPATSGAEAMLQAFRAEGFGAQQSAPRP 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTY--------------------------SED 392 A S + + R + + Sbjct: 361 ANSYSPASWRTAPPAPRSEWSPQTAHPAHRPLDLQAAPALRENGQAVLGDVAVPAADARA 420 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + E LG A AQIH+NYI++QT D LVIVDQHAAHERL++E ++ ++ I Sbjct: 421 SVAEAPVELMQKPLGAARAQIHENYIVAQTEDSLVIVDQHAAHERLVYEALKNALHARPI 480 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 Q LL PEI+DL E + + H E L R G+ E+FGP AIA+RE PA+L + N+ QL Sbjct: 481 AGQKLLIPEIVDLPEEDAQRLAGHAETLARFGLGVEQFGPGAIAVRETPAMLGEMNVQQL 540 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 +RD+ DEI + T L+ + ++ ATMAC+GS+RSGR+++ EMN LLR+ME P S Sbjct: 541 IRDLADEIAEHDTADGLKAMLHHVAATMACHGSVRSGRRLKPEEMNALLRDMEATPGSGT 600 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+I+LKL+DIE+LFGR Sbjct: 601 CNHGRPTYIELKLTDIERLFGR 622 >gi|70734068|ref|YP_257708.1| DNA mismatch repair protein [Pseudomonas fluorescens Pf-5] gi|68348367|gb|AAY95973.1| DNA mismatch repair protein MutL [Pseudomonas fluorescens Pf-5] Length = 636 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 212/625 (33%), Positives = 339/625 (54%), Gaps = 32/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 10 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQAGVKLLRVRDDGS 69 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR Sbjct: 70 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDAEQAW 129 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + V+P A GT VEVRDLFF PAR FLK+E+ E + + +VI+R+A+A Sbjct: 130 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALA 189 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F + ++ + R++ V G F+ A+ + + N + L G+ G Sbjct: 190 RFDVAFHLRHNGKSILSLHEAKDDAARARRVAAVCGSGFLEQALPIEVERNGLHLWGWVG 249 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y ++NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 250 LPTFSRSQADLQYFYVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPSVVDVN 309 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ------DNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ + + P+ Sbjct: 310 VHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPEDQLAAPAAVAGIVRPTGIEAGEFGPQ 369 Query: 353 THLPKYAT-SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL----- 406 + A +L Q + + P ES+ + + Sbjct: 370 GEMRLAANLALEQPQSQPSFNAPGAGAGSGYQYQYTPRPQPVLPAAESQGVYREFFAPLP 429 Query: 407 -----------------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 G A AQ+ YI+++ GLV+VD HAAHER+++E+++ S Sbjct: 430 GAPAAALPDGQEDIPPLGYALAQLKGIYILAENALGLVLVDMHAAHERIMYERLKVAMAS 489 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE I + + E EH RLG + +R GP ++AIR+IPA+L + Sbjct: 490 EGLSGQPLLVPESIAVSQREADCAEEHMSWFQRLGFELQRLGPESLAIRQIPALLKQAEA 549 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME Sbjct: 550 NRLVHDVLADLMEYGTSDRIQAHLNELLGTMACHGAIRANRRLALPEMNALLRDMENTER 609 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L D++KLF R Sbjct: 610 SGQCNHGRPTWTQMGLDDLDKLFLR 634 >gi|94429030|gb|ABF18946.1| DNA mismatch repair protein mutL [uncultured bacterium pFosLip] Length = 585 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 215/598 (35%), Positives = 333/598 (55%), Gaps = 19/598 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++L +INQIAAGE++ERP+ +KEL+ENSLDA + V I GG ++ D+G Sbjct: 1 MPIQQLPNHLINQIAAGEVVERPASVVKELLENSLDAGAQAVHVDILAGGSKLIRVRDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ +A+ RH TSKIS +D + + GFRGEALPSI +V+ L+L SR + Sbjct: 61 AGIPQGELSLALARHATSKISSLEDLEAVVSLGFRGEALPSIASVARLSLTSRSTGGDNA 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ +I RP A GT VEV DLF+ PAR FLK+E+ E I +RR+A+A Sbjct: 121 WQVEADNGEIGEARPAAHPGGTTVEVHDLFYNTPARRRFLKTERTEFGHIDKWVRRLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V+F + + + + +R++++ GE F AV L ++ I + G+ G Sbjct: 181 RPDVAFVLTHNRRTVLDLRAATNREQQQQRLARICGEAFAEQAVYLQHETEGIAITGWIG 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTFNR + + F+NGR++ DK + R AY + + GR+P VL L +DP +D N Sbjct: 241 LPTFNRSQPDLQFWFVNGRSISDKTLSHAARHAYRDVLFHGRFPAYVLGLTVDPATIDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI--SSFHQDNAPKTHLP 356 HPAK IRFR+ I + Q+++ A++ S V + S QD P Sbjct: 301 AHPAKHEIRFRDGRRIHGVVAQAVEVALSDTRPSGHGVAPAPVASGSPIRQDGLRLPAAP 360 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 + A ++E+ + + L P + D D E +G A AQ+ Sbjct: 361 RPAA----------VRESLATYSALAGGAPPVSASDRDAGELPP-----MGYAIAQLGGV 405 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 YI+++ +GLV+VD HAAHER+ +EK+++ F+ + Q LL P + + E E E Sbjct: 406 YILAENREGLVVVDMHAAHERITYEKLKKGFDDKALVRQPLLVPVTVAVAESEARHAEEA 465 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L +G+ +R GP ++ +RE+PA+L + LLRD++ +I + + ++D Sbjct: 466 SELLALVGLVVDRAGPTSLVVREVPALLRGADAEALLRDVLADIAQAGQSSRVEDECHEF 525 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATMAC+ S+R+ R++ EMN LLREME + QCNHGRPT+ + ++++++LF R Sbjct: 526 LATMACHHSVRANRQLTLEEMNALLREMETTERADQCNHGRPTWTAISMAELDRLFLR 583 >gi|161620296|ref|YP_001594182.1| DNA mismatch repair protein [Brucella canis ATCC 23365] gi|189030392|sp|A9MDX3|MUTL_BRUC2 RecName: Full=DNA mismatch repair protein mutL gi|161337107|gb|ABX63411.1| DNA mismatch repair protein MutL [Brucella canis ATCC 23365] Length = 623 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 272/622 (43%), Positives = 394/622 (63%), Gaps = 28/622 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ IKEL+EN++DA ++R+E V AGGGK+ ++TDNG Sbjct: 1 MTIRHLSETIINQIAAGEVIERPASVIKELVENAIDAGATRIEVVTAGGGKTLLRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++E+ +AV RHCTSK++DD +I GFRGEALPSIG+VS LTL SRP ++G + Sbjct: 61 SGIPADELALAVSRHCTSKLTDDVHDIRALGFRGEALPSIGSVSKLTLKSRPQDADSGFE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ++G + RP A+N GTIVEVRDLF+ PARL F+K+++ E ITDV++R+ IA+P Sbjct: 121 VCVTGGHLDGPRPTALNRGTIVEVRDLFYATPARLKFMKTDRAEATAITDVVKRIGIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ + ++M + ERI QV+G +F NA+ ++ + + + L G+ GI Sbjct: 181 HIRFSLAGTDRTPFEMPATGTGAKATLERIGQVLGREFGENALAIDAERDGVRLAGFVGI 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNRGNA + ++NGR V+DK I +R AY++ I R+PV VL L +DP VDVNV Sbjct: 241 PSFNRGNALHQFAYVNGRPVRDKQIFGALRGAYSDVIARDRHPVAVLFLTLDPALVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-NAPKTHLPKY 358 HPAK+ +RFR+P ++R I+ +I++A+ + GI ++ ++ M+ +F + + P+ Sbjct: 301 HPAKADVRFRDPGLVRGLIVGAIKQALAQSGIRPATSGAEAMLQAFRAEGFGAQQSAPRP 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTY--------------------------SED 392 A S + + R + + Sbjct: 361 ANSYSPASWRTAPPAPRSEWSPQTAHPAHRPLDLQAAPALRENGQAVLGDVAVPAADARA 420 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + E LG A AQIH+NYI++QT D LVIVDQHAAHERL++E ++ ++ I Sbjct: 421 SVAEAPVELMQKPLGAARAQIHENYIVAQTEDSLVIVDQHAAHERLVYEALKNALHARPI 480 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 Q LL PEI+DL E + + H E L R G+ E+FGP AIA+RE PA+L + N+ QL Sbjct: 481 AGQMLLIPEIVDLPEEDAQRLAGHAETLARFGLGVEQFGPGAIAVRETPAMLGEMNVQQL 540 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 +RD+ DEI + T L+ + ++ ATMAC+GS+RSGR+++ EMN LLR+ME P S Sbjct: 541 IRDLADEIAEHDTADGLKAMLHHVAATMACHGSVRSGRRLKPEEMNALLRDMEATPGSGT 600 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+I+LKL+DIE+LFGR Sbjct: 601 CNHGRPTYIELKLTDIERLFGR 622 >gi|85717173|ref|ZP_01048131.1| DNA mismatch repair protein [Nitrobacter sp. Nb-311A] gi|85696006|gb|EAQ33906.1| DNA mismatch repair protein [Nitrobacter sp. Nb-311A] Length = 603 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 231/602 (38%), Positives = 361/602 (59%), Gaps = 8/602 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E ++N+IAAGE++ERP+ +KEL+EN++DA ++R++ GGG+ +TD+G Sbjct: 1 MPVRQLPETVVNRIAAGEVVERPASVVKELVENAIDAGATRIDVFTDGGGRRRIGVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +AV RH TSK+ D D I T GFRGEALPSIGAV+ L + +R + Sbjct: 61 AGMAKGDLALAVDRHATSKLDDEDLLGIRTLGFRGEALPSIGAVARLCITTRDAREPHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + S++ P A+ GT VEV DLF+ PARL FLK+++ E I +V+RR+A+A Sbjct: 121 SLTVEGGRKSAIVPAALTQGTRVEVGDLFYATPARLKFLKTDRAEAEAIREVVRRLAMAR 180 Query: 180 PKVSFTFSTIKS-NRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P + FT + + R+ ++G DF A+ + + +T+ G+ Sbjct: 181 PDIGFTLAGEGRAPVTWTSALPGAAGRLTRLGDILGGDFRAAAIPVCAERERVTVDGFAA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P+ R NA Y+F+NGR V+DK IL +R AY++ +P R+PV L + DP++VD N Sbjct: 241 APSLTRANALGQYLFVNGRPVRDKLILGAVRAAYSDYLPRDRHPVAALFVTTDPQEVDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK+ +RFRN ++R I+ ++++ + ++G T++ ++++F +P+ + Sbjct: 301 VHPAKTEVRFRNAGLVRALIVHALKEGLAREGRRTAANSDGAVLTAFRPATSPRPAGWDW 360 Query: 359 ATSLTNTQEKLFLQENRLST------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 S + +T L P+ D + LG A Q Sbjct: 361 RQSPAAPADARPWAGGLPATAFAETGQTTLDVGAPSADVRFDAGPPLDLVDRPLGAARTQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 IH+ YI+SQT DGL++VDQHAAHER+++E+++ + Q LL P+I++L E Sbjct: 421 IHETYIVSQTRDGLIVVDQHAAHERIVYERLKASLARDGVQRQILLIPDIVELDESTVEK 480 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 +++ +L + G+ E FGP A+A+RE P++L K N LLRD+ + + + T L+ R Sbjct: 481 LIDRARELEKFGLAIESFGPGAVAVRETPSLLGKINAAALLRDLAEHMAEWDETLPLERR 540 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 + ++ ATMAC+GS+R+GR ++ EMN LLREME PNS QCNHGRPT+++LKL DIEKLF Sbjct: 541 LMHVAATMACHGSVRAGRILKPEEMNALLREMEATPNSGQCNHGRPTYVELKLDDIEKLF 600 Query: 593 GR 594 GR Sbjct: 601 GR 602 >gi|17989371|ref|NP_542004.1| DNA mismatch repair protein [Brucella melitensis bv. 1 str. 16M] gi|23499977|ref|NP_699417.1| DNA mismatch repair protein [Brucella suis 1330] gi|62317165|ref|YP_223018.1| DNA mismatch repair protein [Brucella abortus bv. 1 str. 9-941] gi|83269147|ref|YP_418438.1| DNA mismatch repair protein [Brucella melitensis biovar Abortus 2308] gi|148558497|ref|YP_001257266.1| DNA mismatch repair protein [Brucella ovis ATCC 25840] gi|189022424|ref|YP_001932165.1| DNA mismatch repair protein [Brucella abortus S19] gi|237816724|ref|ZP_04595716.1| DNA mismatch repair protein MutL [Brucella abortus str. 2308 A] gi|254691352|ref|ZP_05154606.1| DNA mismatch repair protein [Brucella abortus bv. 6 str. 870] gi|254695348|ref|ZP_05157176.1| DNA mismatch repair protein [Brucella abortus bv. 3 str. Tulya] gi|254698443|ref|ZP_05160271.1| DNA mismatch repair protein [Brucella abortus bv. 2 str. 86/8/59] gi|254699509|ref|ZP_05161337.1| DNA mismatch repair protein [Brucella suis bv. 5 str. 513] gi|254702632|ref|ZP_05164460.1| DNA mismatch repair protein [Brucella suis bv. 3 str. 686] gi|254706237|ref|ZP_05168065.1| DNA mismatch repair protein [Brucella pinnipedialis M163/99/10] gi|254711470|ref|ZP_05173281.1| DNA mismatch repair protein [Brucella pinnipedialis B2/94] gi|254731891|ref|ZP_05190469.1| DNA mismatch repair protein [Brucella abortus bv. 4 str. 292] gi|256029899|ref|ZP_05443513.1| DNA mismatch repair protein [Brucella pinnipedialis M292/94/1] gi|256043138|ref|ZP_05446080.1| DNA mismatch repair protein [Brucella melitensis bv. 1 str. Rev.1] gi|256059548|ref|ZP_05449747.1| DNA mismatch repair protein [Brucella neotomae 5K33] gi|256111875|ref|ZP_05452836.1| DNA mismatch repair protein [Brucella melitensis bv. 3 str. Ether] gi|256158069|ref|ZP_05455987.1| DNA mismatch repair protein [Brucella ceti M490/95/1] gi|256252976|ref|ZP_05458512.1| DNA mismatch repair protein [Brucella ceti B1/94] gi|256256537|ref|ZP_05462073.1| DNA mismatch repair protein [Brucella abortus bv. 9 str. C68] gi|260544399|ref|ZP_05820220.1| DNA mismatch repair protein mutL [Brucella abortus NCTC 8038] gi|260564360|ref|ZP_05834845.1| DNA mismatch repair protein mutL [Brucella melitensis bv. 1 str. 16M] gi|260568459|ref|ZP_05838928.1| DNA mismatch repair protein mutL [Brucella suis bv. 4 str. 40] gi|260756962|ref|ZP_05869310.1| DNA mismatch repair protein mutL [Brucella abortus bv. 6 str. 870] gi|260759664|ref|ZP_05872012.1| DNA mismatch repair protein mutL [Brucella abortus bv. 4 str. 292] gi|260762906|ref|ZP_05875238.1| DNA mismatch repair protein mutL [Brucella abortus bv. 2 str. 86/8/59] gi|260882774|ref|ZP_05894388.1| DNA mismatch repair protein mutL [Brucella abortus bv. 9 str. C68] gi|261215721|ref|ZP_05930002.1| DNA mismatch repair protein mutL [Brucella abortus bv. 3 str. Tulya] gi|261220069|ref|ZP_05934350.1| DNA mismatch repair protein mutL [Brucella ceti B1/94] gi|261313678|ref|ZP_05952875.1| DNA mismatch repair protein mutL [Brucella pinnipedialis M163/99/10] gi|261319079|ref|ZP_05958276.1| DNA mismatch repair protein mutL [Brucella pinnipedialis B2/94] gi|261323516|ref|ZP_05962713.1| DNA mismatch repair protein mutL [Brucella neotomae 5K33] gi|261749964|ref|ZP_05993673.1| DNA mismatch repair protein mutL [Brucella suis bv. 5 str. 513] gi|261753217|ref|ZP_05996926.1| DNA mismatch repair protein mutL [Brucella suis bv. 3 str. 686] gi|265986917|ref|ZP_06099474.1| DNA mismatch repair protein mutL [Brucella pinnipedialis M292/94/1] gi|265989570|ref|ZP_06102127.1| DNA mismatch repair protein mutL [Brucella melitensis bv. 1 str. Rev.1] gi|265993328|ref|ZP_06105885.1| DNA mismatch repair protein mutL [Brucella melitensis bv. 3 str. Ether] gi|265996583|ref|ZP_06109140.1| DNA mismatch repair protein mutL [Brucella ceti M490/95/1] gi|297249893|ref|ZP_06933594.1| DNA mismatch repair protein mutL [Brucella abortus bv. 5 str. B3196] gi|54037874|sp|P65490|MUTL_BRUSU RecName: Full=DNA mismatch repair protein mutL gi|54041515|sp|P65489|MUTL_BRUME RecName: Full=DNA mismatch repair protein mutL gi|81309329|sp|Q579M7|MUTL_BRUAB RecName: Full=DNA mismatch repair protein mutL gi|123727280|sp|Q2YIH2|MUTL_BRUA2 RecName: Full=DNA mismatch repair protein mutL gi|166232081|sp|A5VTW1|MUTL_BRUO2 RecName: Full=DNA mismatch repair protein mutL gi|238691508|sp|B2SD15|MUTL_BRUA1 RecName: Full=DNA mismatch repair protein mutL gi|17985243|gb|AAL54268.1| DNA mismatch repair protein mutl [Brucella melitensis bv. 1 str. 16M] gi|23463559|gb|AAN33422.1| DNA mismatch repair protein MutL [Brucella suis 1330] gi|62197358|gb|AAX75657.1| MutL, DNA mismatch repair protein [Brucella abortus bv. 1 str. 9-941] gi|82939421|emb|CAJ12378.1| DNA mismatch repair protein:ATP-binding region, ATPase-like [Brucella melitensis biovar Abortus 2308] gi|148369782|gb|ABQ62654.1| DNA mismatch repair protein MutL [Brucella ovis ATCC 25840] gi|189020998|gb|ACD73719.1| DNA mismatch repair protein [Brucella abortus S19] gi|237787537|gb|EEP61753.1| DNA mismatch repair protein MutL [Brucella abortus str. 2308 A] gi|260097670|gb|EEW81544.1| DNA mismatch repair protein mutL [Brucella abortus NCTC 8038] gi|260152003|gb|EEW87096.1| DNA mismatch repair protein mutL [Brucella melitensis bv. 1 str. 16M] gi|260155124|gb|EEW90205.1| DNA mismatch repair protein mutL [Brucella suis bv. 4 str. 40] gi|260669982|gb|EEX56922.1| DNA mismatch repair protein mutL [Brucella abortus bv. 4 str. 292] gi|260673327|gb|EEX60148.1| DNA mismatch repair protein mutL [Brucella abortus bv. 2 str. 86/8/59] gi|260677070|gb|EEX63891.1| DNA mismatch repair protein mutL [Brucella abortus bv. 6 str. 870] gi|260872302|gb|EEX79371.1| DNA mismatch repair protein mutL [Brucella abortus bv. 9 str. C68] gi|260917328|gb|EEX84189.1| DNA mismatch repair protein mutL [Brucella abortus bv. 3 str. Tulya] gi|260918653|gb|EEX85306.1| DNA mismatch repair protein mutL [Brucella ceti B1/94] gi|261298302|gb|EEY01799.1| DNA mismatch repair protein mutL [Brucella pinnipedialis B2/94] gi|261299496|gb|EEY02993.1| DNA mismatch repair protein mutL [Brucella neotomae 5K33] gi|261302704|gb|EEY06201.1| DNA mismatch repair protein mutL [Brucella pinnipedialis M163/99/10] gi|261739717|gb|EEY27643.1| DNA mismatch repair protein mutL [Brucella suis bv. 5 str. 513] gi|261742970|gb|EEY30896.1| DNA mismatch repair protein mutL [Brucella suis bv. 3 str. 686] gi|262550880|gb|EEZ07041.1| DNA mismatch repair protein mutL [Brucella ceti M490/95/1] gi|262764198|gb|EEZ10230.1| DNA mismatch repair protein mutL [Brucella melitensis bv. 3 str. Ether] gi|263000239|gb|EEZ12929.1| DNA mismatch repair protein mutL [Brucella melitensis bv. 1 str. Rev.1] gi|264659114|gb|EEZ29375.1| DNA mismatch repair protein mutL [Brucella pinnipedialis M292/94/1] gi|297173762|gb|EFH33126.1| DNA mismatch repair protein mutL [Brucella abortus bv. 5 str. B3196] Length = 623 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 272/622 (43%), Positives = 394/622 (63%), Gaps = 28/622 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ IKEL+EN++DA ++R+E V AGGGK+ ++TDNG Sbjct: 1 MTIRHLSETIINQIAAGEVIERPASVIKELVENAIDAGATRIEVVTAGGGKTLLRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++E+ +AV RHCTSK++DD +I GFRGEALPSIG+VS LTL SRP ++G + Sbjct: 61 SGIPADELALAVSRHCTSKLTDDVHDIRALGFRGEALPSIGSVSKLTLKSRPQDADSGFE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ++G + RP A+N GTIVEVRDLF+ PARL F+K+++ E ITDV++R+ IA+P Sbjct: 121 VCVTGGHLDGPRPTALNRGTIVEVRDLFYATPARLKFMKTDRAEATAITDVVKRIGIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ + ++M + ERI QV+G +F NA+ ++ + + + L G+ GI Sbjct: 181 HIRFSLAGTDRTPFEMPATGTGAEATLERIGQVLGREFGENALAIDAERDGVRLAGFVGI 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNRGNA + ++NGR V+DK I +R AY++ I R+PV VL L +DP VDVNV Sbjct: 241 PSFNRGNALHQFAYVNGRPVRDKQIFGALRGAYSDVIARDRHPVAVLFLTLDPALVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-NAPKTHLPKY 358 HPAK+ +RFR+P ++R I+ +I++A+ + GI ++ ++ M+ +F + + P+ Sbjct: 301 HPAKADVRFRDPGLVRGLIVGAIKQALAQSGIRPATSGAEAMLQAFRAEGFGAQQSAPRP 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTY--------------------------SED 392 A S + + R + + Sbjct: 361 ANSYSPASWRTAPPAPRSEWSPQTAHPAHRPLDLQAAPALRENGQAVLGDVAVPAADARA 420 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + E LG A AQIH+NYI++QT D LVIVDQHAAHERL++E ++ ++ I Sbjct: 421 SVAEAPVELMQKPLGAARAQIHENYIVAQTEDSLVIVDQHAAHERLVYEALKNALHARPI 480 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 Q LL PEI+DL E + + H E L R G+ E+FGP AIA+RE PA+L + N+ QL Sbjct: 481 AGQMLLIPEIVDLPEEDAQRLAGHAETLARFGLGVEQFGPGAIAVRETPAMLGEMNVQQL 540 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 +RD+ DEI + T L+ + ++ ATMAC+GS+RSGR+++ EMN LLR+ME P S Sbjct: 541 IRDLADEIAEHDTADGLKAMLHHVAATMACHGSVRSGRRLKPEEMNALLRDMEATPGSGT 600 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+I+LKL+DIE+LFGR Sbjct: 601 CNHGRPTYIELKLTDIERLFGR 622 >gi|85705062|ref|ZP_01036162.1| DNA mismatch repair protein [Roseovarius sp. 217] gi|85670384|gb|EAQ25245.1| DNA mismatch repair protein [Roseovarius sp. 217] Length = 611 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 259/601 (43%), Positives = 385/601 (64%), Gaps = 12/601 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L E +N+IAAGE++ERP+ A+KEL+EN+LDA ++R+E A GGK+ ++ D+G Sbjct: 14 QIRQLDEAAVNRIAAGEVVERPASAVKELVENALDAGATRIEVGFADGGKTLIRVMDDGC 73 Query: 62 GMTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM +++P+A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR A+ Sbjct: 74 GMAPDQLPLALARHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLTIASRAGDA--AAE 131 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++G + +V+P A+N GT+V +RDLF+ PARL F++S++ E I D ++R+A+A P Sbjct: 132 ITVAGGQAGAVKPAALNAGTVVTLRDLFYATPARLKFMRSDRAEAQAIADTVKRLAMAEP 191 Query: 181 KVSF---TFSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITL 233 V F S R +G+ + R+++V+G +F NA+ ++ + + Sbjct: 192 FVGFVLREVSGGGEGRIVFRADPESGDLFDALHGRLARVLGAEFAENALRIDATREGVRM 251 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 GY +PT++RG+A Y+F+NGR V+DK + +R AY + + R+P V L L+ DP Sbjct: 252 TGYAALPTYSRGSAVAQYLFVNGRPVRDKMLYGALRAAYQDVLSRDRHPAVALFLDCDPT 311 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 VDVNVHPAKS +RFR+P + R I+ ++ A+ + G S+ ++ + +F + + Sbjct: 312 LVDVNVHPAKSEVRFRDPGLARGLIVSGLRHALAEAGHRASTTVAGATLGAFRPEPVGRI 371 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 + + + + + S VEE AT LG A AQ+ Sbjct: 372 YQMDRPSPQARAL--AYSAQAPGFADMAEDWSARVESAPEPQVEEPPATALPLGAARAQV 429 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H+NYII+QT G+VIVDQHAAHERL++E++++ + + +Q LL PEI+DL E +CAL+ Sbjct: 430 HENYIIAQTETGMVIVDQHAAHERLVYERLKRQMAESGVAAQALLIPEIVDLSEADCALL 489 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 MEH E L LG+ E FGP ++A+RE PAIL N LLRDI+DE+ D + TL+ RI Sbjct: 490 MEHAEALAGLGLGIEPFGPGSLAVRETPAILGPVNAGALLRDILDELQDQGASGTLKLRI 549 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + IL+ +AC+GS+RSGR+M + EMN LLR+ME+ P S QCNHGRPT+++L+LSDIE+LFG Sbjct: 550 DAILSRVACHGSVRSGRRMSAEEMNALLRKMERTPMSGQCNHGRPTYVELRLSDIERLFG 609 Query: 594 R 594 R Sbjct: 610 R 610 >gi|329895360|ref|ZP_08270985.1| DNA mismatch repair protein MutL [gamma proteobacterium IMCC3088] gi|328922373|gb|EGG29717.1| DNA mismatch repair protein MutL [gamma proteobacterium IMCC3088] Length = 606 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 212/602 (35%), Positives = 341/602 (56%), Gaps = 9/602 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ +KE++ENSLDA ++R++ + GGG ++ DNG Sbjct: 3 RIHSLSPQLANQIAAGEVVERPASVVKEVVENSLDAGATRIDIEVEGGGVKRIRVRDNGQ 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ S+++P+A+ RH TSKI DD + + GFRGEAL SI +VS L L + + + Sbjct: 63 GIESDDLPLALARHATSKIVSLDDLEAVSSLGFRGEALASIASVSRLALSTNASSDASAG 122 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 +A S +++ +VRP GT V+VRDLFF PAR FL++E+ E N + +V++R+A+ Sbjct: 123 VLAESEGRDQVVAVRPTPHPQGTTVDVRDLFFNTPARRKFLRTEKTEFNHLEEVVKRLAL 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+F+ S + + R++ + G FI+ V ++ + + + L G+ Sbjct: 183 ARFDVAFSLSHNGRVVLNLPVADSTAAQQRRVATICGPAFIDQVVHIDSERSGLGLSGWV 242 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+PTF+R A+ Y F+NGR ++DK + I+ AY + + GR+P VL L I+P VDV Sbjct: 243 GLPTFSRSQADLQYFFVNGRVIRDKLVAHAIKQAYRDVLYHGRHPAFVLYLTINPALVDV 302 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST---SSVLSKKMISSFHQDNAPKTH 354 NVHP K +RFR+ + NF+ ++ +A+ + SS + + H D Sbjct: 303 NVHPTKHEVRFRDSREVHNFLFSTLHRALADVRPADQLVSSERFQPLAEGGHLDTHTGEV 362 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE--SEATHYQLGIACAQ 412 + + NR S + P+ E SE LG A AQ Sbjct: 363 SQGALSWGGMSHRPDVGSSNRPSPLAVQSQMSSYGRLHPVPLPEQSSEEEAPPLGYALAQ 422 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 + YI+S+ GLV+VD HAAHER+ +E++++ S + SQ LL P+ I + + E L Sbjct: 423 LQGIYILSENAQGLVLVDMHAAHERITYERLKEADASEGVRSQPLLVPQAIAVSQKEVEL 482 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 EH+ LG++ E ++ IR +P +L ++ QL+RD++ ++ + + + Sbjct: 483 AREHEAVFVGLGLQLEPASEESLLIRSVPTLLRSADMEQLVRDVLSDLAEYGQSDRIAAE 542 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 E IL+TMAC+GS+R+ R + EMN LLR++E + QCNHGRPT+ +L L++++KLF Sbjct: 543 REAILSTMACHGSVRANRSLTIPEMNALLRDIEATERAGQCNHGRPTWTQLSLTELDKLF 602 Query: 593 GR 594 R Sbjct: 603 LR 604 >gi|146278965|ref|YP_001169124.1| DNA mismatch repair protein [Rhodobacter sphaeroides ATCC 17025] gi|145557206|gb|ABP71819.1| DNA mismatch repair protein MutL [Rhodobacter sphaeroides ATCC 17025] Length = 612 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 257/602 (42%), Positives = 381/602 (63%), Gaps = 15/602 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E IN+IAAGE++ERP+ A+KEL+EN+LDA + RV IA GGK+ ++TD+G G Sbjct: 15 IRQLDEAAINRIAAGEVVERPASAVKELVENALDAGARRVSVDIADGGKTLIRVTDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT+E++P+A+ RH TSKI D +I +FGFRGEALPS+ AV LT+ SR GA + Sbjct: 75 MTAEDLPLALSRHATSKIDGSDLLDIRSFGFRGEALPSLAAVGRLTMTSRVAGGE-GAAV 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 +S ++ VRP A+ GT+VE+RDLFF PARL FL++++ ET I +V+RR+A+A P+ Sbjct: 134 TVSAGRMEPVRPAALGAGTVVELRDLFFATPARLKFLRTDRAETQAIAEVVRRLALAEPE 193 Query: 182 VSFTFSTI--KSNRYKMNFQSTNGNF----PERISQVIGEDFINNAVELNEKSNEITLQG 235 V FT + R ++ G+ R+++V+G DF NA+ ++ + LQG Sbjct: 194 VGFTLTDHSAGEPRLLFRAEAEGGDLFDALHRRVARVVGADFAENALRIDVAREGLRLQG 253 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y +PT++RG+A ++F+NGR V D+ +L +R Y + + RYP VL L DP++V Sbjct: 254 YAALPTYSRGSAVAQFLFVNGRPVLDRMLLGALRAGYMDVLSRDRYPAAVLNLICDPQRV 313 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHPAK+ +RFR +R I+ ++++A+ G S+ ++ + + +F + A Sbjct: 314 DVNVHPAKAEVRFRESGEVRGLIVTALRQALAGAGHRASTTVAGETLEAFRPEAAAPPAA 373 Query: 356 PKYA---TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 Y S + Q + + L + E E LG A AQ Sbjct: 374 RIYQMDRPSAASVARSFAFQAPQAAMPGLAEAPAARVEEAPVDAAE----DRPLGAARAQ 429 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 IH N+I++QT GLVIVDQHAAHERL++E++++ + I Q LL PEI++L + A Sbjct: 430 IHGNWILAQTARGLVIVDQHAAHERLVYERLKRQRDGAGIARQVLLIPEIVELSPSDAAR 489 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 ++E ++L LG+ E FG A+A+RE+PAIL K LLRDI+D++ D ++ LQ R Sbjct: 490 LLEAADELAALGLVLEPFGGGAVAVREVPAILGKVEAAPLLRDILDDLADLGSSDRLQAR 549 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 ++ +L+ MAC+GS+RSGR +++ EMN LLREME P S QCNHGRPT+++LKL+DIE+LF Sbjct: 550 MDAVLSRMACHGSVRSGRALRAEEMNALLREMEATPLSGQCNHGRPTYVELKLADIERLF 609 Query: 593 GR 594 GR Sbjct: 610 GR 611 >gi|254477379|ref|ZP_05090765.1| DNA mismatch repair protein MutL [Ruegeria sp. R11] gi|214031622|gb|EEB72457.1| DNA mismatch repair protein MutL [Ruegeria sp. R11] Length = 649 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 260/634 (41%), Positives = 386/634 (60%), Gaps = 43/634 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA ++R+ IA GGK+ ++TD+G G Sbjct: 16 IRQLDDSAINRIAAGEVVERPASAVKELVENAIDAGATRITIDIADGGKTLIRVTDDGCG 75 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT +++P+A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR ++ AQI Sbjct: 76 MTPDDLPLALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLTITSRAAGHD-AAQI 134 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 +SG K+ V+P A+ GT+VE+RDLF+ PARL F++S++ E+ I DVI+R+A+A P Sbjct: 135 RVSGGKLEPVKPAALRGGTVVELRDLFYATPARLKFMRSDRAESQAIGDVIKRLAMAEPS 194 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQ 234 V FT S R +G+ + R++ V+G +F NA++++ I L Sbjct: 195 VGFTLRDVSGGGDGRVTFRADPLSGDLFDALHGRLAAVLGREFAENALKIDASREGIRLY 254 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG A ++F+N R V+DK + +R AY + + R+P L ++ DP Sbjct: 255 GYAALPTYSRGAAVAQFLFVNTRPVKDKMLTGALRAAYFDFLSRDRHPAAALFIDCDPTL 314 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAKS +RFR+P + R I+ S++ A+ + G SS ++ + + + T Sbjct: 315 VDVNVHPAKSEVRFRDPGLARGLIVSSLRHALAEAGHRASSTVAGATLGAMRPEQPTATG 374 Query: 355 LPKY---------ATSLTNTQEKLFLQENRLSTNDLLPSDDPTY---------------- 389 P+ A SL+ + + + + + Sbjct: 375 APRVYQMDRPSMGARSLSYAAQAPYRADGAPVPQGDDNAPGFSEFASAYSGRVIDAPAPP 434 Query: 390 ---------SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 ED E A LG A Q+H+NYII+QT DG+VIVDQHAAHERL++ Sbjct: 435 HPAMAGQAVQEDQPEPPEQRAEELPLGAARGQVHENYIIAQTRDGMVIVDQHAAHERLVY 494 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 EK+++ + +Q LL P+I++L E +CA ++ ++L + G+ E FG A+A+RE Sbjct: 495 EKLKRQMAENGVAAQALLIPDIVELSENDCARLLSVADELQKFGLGIEAFGGGAVAVRET 554 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 PAIL N ++RDI+DE+ D + +Q +IE IL+ +AC+GSIRSGR M+ EMN L Sbjct: 555 PAILGTVNAEAMVRDILDELDDQGESQLVQAKIEAILSRVACHGSIRSGRWMRGEEMNAL 614 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LREME P+S QCNHGRPT+++LKL+DIE+LFGR Sbjct: 615 LREMEATPHSGQCNHGRPTYVELKLADIERLFGR 648 >gi|254427517|ref|ZP_05041224.1| DNA mismatch repair protein MutL [Alcanivorax sp. DG881] gi|196193686|gb|EDX88645.1| DNA mismatch repair protein MutL [Alcanivorax sp. DG881] Length = 622 Score = 558 bits (1438), Expect = e-156, Method: Composition-based stats. Identities = 203/618 (32%), Positives = 340/618 (55%), Gaps = 25/618 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L ++ NQIAAGE++ERP+ +KEL+EN+LDA S + + GG ++ DNG Sbjct: 3 KIQLLDSRLANQIAAGEVVERPASVLKELLENALDAGSESISVDVEQGGVKLVRVRDNGN 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+A+ RH TSKI DD I T GFRGEAL +I +VS L+L S G Sbjct: 63 GIERDDLPLALSRHATSKIRGLDDLEAIGTLGFRGEALAAISSVSRLSLASNVEGEAEGW 122 Query: 120 QIAISGEKISSVR-PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ + G ++ P GT V +RDLFF PAR FL++E+ E N + +V RR+A++ Sbjct: 123 QVTVEGRDMAPTVAPAGHPRGTTVTMRDLFFNTPARRRFLRTEKTEFNHLEEVFRRIALS 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +F + + +++ + R++++ G+ F+ AV ++ + + + L G+ G Sbjct: 183 EFNTAFRLTHNQKVIHQLPAGLDDTLRAARVAKLCGKGFMEQAVAVDVERDGLRLHGWMG 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y ++NGR ++DK + +R AYA+ + GR+P VL LE+DP VDVN Sbjct: 243 LPTFSRSQADLQYFYVNGRVIRDKVVSHAVRQAYADVLYHGRHPAYVLFLELDPAMVDVN 302 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKK-----------GISTSSVLSKKMISSFHQ 347 VHP K +RFR ++ F+ S+ +AI ++ ++ Sbjct: 303 VHPTKHEVRFREQRMVHGFLYSSLHRAIAGVRPGQELAGSVVDEGATAAGMDTAMAPSQG 362 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQ----------ENRLSTNDLLPSDDPTYSEDNDPVE 397 + + + +SL+ + + + L + S + Sbjct: 363 NMSLTSPAGAGMSSLSRPAGQAYPPTGGSAFYGQGARQADAYGALVGQQVSESAPSMMPP 422 Query: 398 ESE-ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 SE T LG A AQ+H +I+++ G+V+VD HAAHER+ +E+++Q + K+ SQ Sbjct: 423 ASEDETVPPLGYAVAQLHGIFILAENQQGMVVVDMHAAHERITYERLKQSWADDKVRSQP 482 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 LL P + + E + E RLG ER GP + +RE+PA+L + ++RD+ Sbjct: 483 LLVPVSLAVSSREADFAEQQPEVFSRLGFGVERAGPETLVVREVPALLRNGDSESMVRDV 542 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 + +++ ++ + +++ +L+TMAC+GS+R+ R++ EMN LLR+ME S QCNHG Sbjct: 543 LSDLLAQGSSERIAQKLDELLSTMACHGSVRANRRLTIPEMNALLRDMEATERSGQCNHG 602 Query: 577 RPTFIKLKLSDIEKLFGR 594 RPT+ ++ + D+++LF R Sbjct: 603 RPTWTQMSIKDLDRLFMR 620 >gi|225686071|ref|YP_002734043.1| DNA mismatch repair protein [Brucella melitensis ATCC 23457] gi|256262806|ref|ZP_05465338.1| DNA mismatch repair protein [Brucella melitensis bv. 2 str. 63/9] gi|254766161|sp|C0RKF6|MUTL_BRUMB RecName: Full=DNA mismatch repair protein mutL gi|225642176|gb|ACO02089.1| DNA mismatch repair protein MutL [Brucella melitensis ATCC 23457] gi|263092627|gb|EEZ16848.1| DNA mismatch repair protein [Brucella melitensis bv. 2 str. 63/9] gi|326410397|gb|ADZ67461.1| DNA mismatch repair protein [Brucella melitensis M28] Length = 623 Score = 558 bits (1438), Expect = e-156, Method: Composition-based stats. Identities = 272/622 (43%), Positives = 395/622 (63%), Gaps = 28/622 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ IKEL+EN++DA ++R+E V AGGGK+ ++TDNG Sbjct: 1 MTIRHLSETIINQIAAGEVIERPASVIKELVENAIDAGATRIEVVTAGGGKTLLRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++E+ +AV RHCTSK++DD +I GFRGEALPSIG+VS LTL SRP ++G + Sbjct: 61 SGIPADELALAVSRHCTSKLTDDVHDIRALGFRGEALPSIGSVSKLTLKSRPQDADSGFE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ++G + RP A+N GTIVEVRDLF+ PARL F+K+++ E ITDV++R+ IA+P Sbjct: 121 VCVTGGHLDGPRPTALNRGTIVEVRDLFYATPARLKFMKTDRAEATAITDVVKRIGIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ + ++M + ERI QV+G +F NA+ ++ + + + L G+ GI Sbjct: 181 HIRFSLAGTDRTPFEMPATGTGAEATLERIGQVLGREFGENALAIDAERDGVRLAGFVGI 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNRGNA + ++NGR V+DK I +R AY++ I R+PV VL L +DP VDVNV Sbjct: 241 PSFNRGNALHQFAYVNGRPVRDKQIFGALRGAYSDVIARDRHPVAVLFLTLDPALVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-NAPKTHLPKY 358 HPAK+ +RFR+P ++R I+ +I++A+ + GI ++ ++ M+ +F + + P+ Sbjct: 301 HPAKADVRFRDPGLVRGLIVGAIKQALAQSGIRPATSGAEAMLQAFRAEGFGAQQSAPRP 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDP--------------------------TYSED 392 A S + + R + + + Sbjct: 361 ANSYSPASWRTAPPAPRSEWSPQTAQTAHRPLDLQAAPALRENGQAVLGDVAVPASDARA 420 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + E LG A AQIH+NYI++QT D LVIVDQHAAHERL++E ++ ++ I Sbjct: 421 SVAEAPVELMQKPLGAARAQIHENYIVAQTEDSLVIVDQHAAHERLVYEALKNALHARPI 480 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 Q LL PEI+DL E + + H E L R G+ E+FGP AIA+RE PA+L + N+ QL Sbjct: 481 AGQMLLIPEIVDLPEEDAQRLAGHAETLARFGLGVEQFGPGAIAVRETPAMLGEMNVQQL 540 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 +RD+ DEI + T L+ + ++ ATMAC+GS+RSGR+++ EMN LLR+ME P S Sbjct: 541 IRDLADEIAEHDTADGLKAMLHHVAATMACHGSVRSGRRLKPEEMNALLRDMEATPGSGT 600 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+I+LKL+DIE+LFGR Sbjct: 601 CNHGRPTYIELKLTDIERLFGR 622 >gi|304311527|ref|YP_003811125.1| DNA mismatch repair enzyme (predicted ATPase) [gamma proteobacterium HdN1] gi|301797260|emb|CBL45480.1| DNA mismatch repair enzyme (predicted ATPase) [gamma proteobacterium HdN1] Length = 646 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 209/642 (32%), Positives = 352/642 (54%), Gaps = 49/642 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L ++ NQIAAGE++ERP+ +KEL+EN+LDA ++R++ + GG ++ DNG Sbjct: 3 RIELLPPRLANQIAAGEVVERPASVLKELLENALDAGATRIDIDVEEGGVKLIRVRDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A+ RH TSKI +D + T GFRGEAL SI +VS L L + +N TG Sbjct: 63 GIPKDEMPLALARHATSKIHQIEDLEGVVTLGFRGEALASIASVSRLQLSASDNENGTGW 122 Query: 120 QIAISGEKISSVRPVA-MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ G+ ++++ GT +EV DLFF PAR FL++E+ E N + +V R++A++ Sbjct: 123 RVETEGQDMAAMVSATAHPRGTTLEVHDLFFNTPARRKFLRAEKTEFNHLEEVFRKLALS 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + + F+ N +++ ++ RI+ ++G F+ NAV + ++ L G+ G Sbjct: 183 HFETGFSLRHNGRNLHQLKPATSELEQDRRIASLLGSVFVENAVRVEVAIGDLRLWGWMG 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR ++DK + +R AY + + R+P VL E+DPR VDVN Sbjct: 243 LPTFSRAQADCQYFFVNGRVIRDKVVNHAVRQAYRDVLYHDRHPAYVLFFELDPRMVDVN 302 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK------------------ 340 VHP K +RFR + +F+ +S+ +AI + ++++ ++ Sbjct: 303 VHPTKHEVRFRESRQVHDFLYRSLHRAIAEITPASATPAAQSGMAGQAPLSASEIPFGAN 362 Query: 341 ----------MISSFHQDNAPKTHLPKYAT------------------SLTNTQEKLFLQ 372 ++ + P +P + S + Sbjct: 363 ANANVDHSGMLLGASSAAYIPSGFVPNPSALPDQAAPQQTVLPIGIGGSWQAPRRDSGNS 422 Query: 373 ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 ++ L E+ E LG A AQ+H +I++Q +GL++VD H Sbjct: 423 YRAMAGYQALHPLPEQSPENTLTPSVREGEIPPLGFALAQLHGVFILAQNQNGLIVVDMH 482 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AAHER+ +E+M+Q + ++ SQTLL P + + E LI E E RLG + ER GP Sbjct: 483 AAHERITYERMKQTWAEDRLRSQTLLVPIGFAVSQREADLIDEMPETFTRLGFRIERVGP 542 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 ++ +R++PA+L++ + L+RD++ +++ + +++ I +L TMAC+GS+R+ R++ Sbjct: 543 ESLLVRDVPALLAECRVESLVRDVLGDLLVHGNSQRIEEHINALLGTMACHGSVRANRQL 602 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +EMN LLR+ME S QCNHGRPT++ L L +++KLF R Sbjct: 603 SLMEMNALLRDMEATERSGQCNHGRPTWVSLSLKELDKLFLR 644 >gi|304393197|ref|ZP_07375125.1| DNA mismatch repair protein MutL [Ahrensia sp. R2A130] gi|303294204|gb|EFL88576.1| DNA mismatch repair protein MutL [Ahrensia sp. R2A130] Length = 620 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 263/619 (42%), Positives = 393/619 (63%), Gaps = 25/619 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E I+NQIAAGE++ERP+ ++EL++N++DA + R++ VIA GGK ++TD+G Sbjct: 1 MPVRRLHETIVNQIAAGEVVERPASVVRELLDNAIDAGAKRIDLVIASGGKGLIRVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM ++++ +AV+RHCTSK++DD +IHT GFRGEALPSIG+VS LT+ +R +++G + Sbjct: 61 RGMDADDLALAVERHCTSKLTDDLLDIHTLGFRGEALPSIGSVSRLTIRTRQDGSDSGYE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI+ VRP A N GT+VEV DLF+ PARL FLK+E+ ET I DV+RR A+A+P Sbjct: 121 ISVDGGKITQVRPAAFNRGTVVEVADLFYATPARLKFLKTERAETTAILDVLRRAALAHP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++ F+ + + R QV+G DF NA+ ++ + + L G +P Sbjct: 181 EIHFSLGGPDRQPVDHPAAQGDDAWLHRARQVLGVDFAENALTIDAEREGVRLTGLAALP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGNA +V +NGR+V+D+ + IR AY + + GR+P+V L + I+P VDVNVH Sbjct: 241 TFNRGNALSQFVTVNGRSVKDRQLTGAIRGAYMDHLARGRHPMVSLDIAIEPELVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAKS +RFR+P ++R I+ ++++AI G SS M+++F + + A Sbjct: 301 PAKSEVRFRDPGLVRGLIVGALRQAIEAAGHRASSRGGVDMMAAFTPGGLGEQAVRAAAG 360 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND----PVEESEATHYQLGIA------- 409 L F Q S + + + ++E+ AT G Sbjct: 361 GLAENAAGHFDQTGYTSPGNANHDWQQSPNRPVQAGPIGLQEAPATFDMTGAPSADQRPS 420 Query: 410 --------------CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 AQ+H+NYII+QT GLVIVDQHAAHERL++E+M+ + +Q Sbjct: 421 ENTDTYLANPLGAARAQVHENYIIAQTEGGLVIVDQHAAHERLVYERMKAQIAEKGVEAQ 480 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P+I+DL E + A +++H +L +LG+ E FGP +A+RE P +L + N LL+D Sbjct: 481 MLLIPQIVDLAEDDAARLLDHSVELAQLGLCFEEFGPGTLAVRETPTLLGEVNAAALLQD 540 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 + DEI + T T+++RI+++ ATMAC+GS+RSGR+++ EM+ LLR+ME PNS QCNH Sbjct: 541 LADEIAEWGTATTVRERIDHVAATMACHGSVRSGRRLRPQEMDALLRDMEATPNSGQCNH 600 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRPT+++LKLSDIE+LFGR Sbjct: 601 GRPTYVELKLSDIERLFGR 619 >gi|84515075|ref|ZP_01002438.1| DNA mismatch repair protein [Loktanella vestfoldensis SKA53] gi|84511234|gb|EAQ07688.1| DNA mismatch repair protein [Loktanella vestfoldensis SKA53] Length = 607 Score = 558 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 262/599 (43%), Positives = 387/599 (64%), Gaps = 17/599 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E IN+IAAGE++ERP+ A+KEL+ENS+DA + R+E VIA GGK+ +++D+G G Sbjct: 18 IRQLDEAAINRIAAGEVLERPASAVKELVENSIDAGAQRIEVVIADGGKTLIRVSDDGCG 77 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 M ++++P+A+ RH TSKI D NI +FGFRGEAL S+GAV L + SR P + I Sbjct: 78 MAADDLPLALSRHATSKIDGSDLLNITSFGFRGEALASLGAVGRLLITSRTPGDG-AHSI 136 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 A+SG +IS VRP A+ GT+VE+RD+F+ PARL FL++++ E +TDV++R+A+A P Sbjct: 137 AVSGGRISDVRPAALTSGTVVELRDMFYATPARLKFLRTDRAEAQAVTDVVKRLAMAEPF 196 Query: 182 VSFTFS--TIKSNRYKMNFQSTNGNFPERIS----QVIGEDFINNAVELNEKSNEITLQG 235 V+F + R + G+ + + V+G DF +NA+ ++ + + L G Sbjct: 197 VTFILRDASDGDTRVVFRADAQTGDLFDALHGRLQTVLGRDFADNALRIDAERDGFHLTG 256 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y +PT++RG A ++F+NGR V+DK +L +R AY + + R+PV L ++ DP V Sbjct: 257 YAALPTYSRGAAVAQFLFVNGRPVRDKMLLGALRAAYMDVLSRDRHPVAALFVDCDPMLV 316 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHPAKS +RFR+P ++R I+ ++ A+ G SS ++ + + Sbjct: 317 DVNVHPAKSEVRFRDPGVVRGLIVSGLRHALAGAGHRASSTVADATLGAME--------- 367 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 P++AT ++ L+ P S +P + + LG A AQ+H+ Sbjct: 368 PQHATPRVYQMDRPSFSARSLTFQAQAPGFAEMPSARVEPPADDTSADLPLGAARAQVHE 427 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 NYII+QT G+VIVD HAAHERL++EK++ + + +Q LL PEI++L + E A +++ Sbjct: 428 NYIIAQTATGIVIVDGHAAHERLVYEKLKSQMATNGVAAQALLIPEIVELSDHETAALLD 487 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 +DL RLG+ E FG NAIA+RE PAIL + N +LRDI DE+ D + ++Q RIE Sbjct: 488 IADDLARLGLTIEPFGGNAIAVRETPAILGEINAAAMLRDISDELADQGDSASVQARIEA 547 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 IL+ +AC+GSIR+GR+MQ+ EMN LLREME P+S QCNHGRPT+++LKLSDIE+LFGR Sbjct: 548 ILSRVACHGSIRTGRRMQAAEMNALLREMEATPHSGQCNHGRPTYVELKLSDIERLFGR 606 >gi|254516807|ref|ZP_05128865.1| DNA mismatch repair protein MutL [gamma proteobacterium NOR5-3] gi|219674312|gb|EED30680.1| DNA mismatch repair protein MutL [gamma proteobacterium NOR5-3] Length = 624 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 217/622 (34%), Positives = 346/622 (55%), Gaps = 28/622 (4%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I++L ++ NQIAAGE++ERP+ +KEL+ENSLDA + RV+ I G ++ DN Sbjct: 1 MPVIKRLPARLANQIAAGEVVERPASVVKELLENSLDAGALRVDIDIEAAGTKLIRVRDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 GFG+++E++P+A+ RH TSKI DD + +FGFRGEAL SIG+VSHL + S + + Sbjct: 61 GFGISAEDLPLALDRHATSKIGSLDDLEQVGSFGFRGEALASIGSVSHLIVTSNTAEAGS 120 Query: 118 -GAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 + SG + +P A GT VEVRDLFF PAR FL++E+ E N + DV++R+ Sbjct: 121 EAHSASCSGRDMQVTLKPAAHPQGTTVEVRDLFFNTPARRKFLRTERTEFNHLDDVVKRL 180 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A++ VSF + + R++ + G F+ +AV ++ + E+ L G Sbjct: 181 ALSRFDVSFGLRHNGRQLQDLRRCDDEADRLRRVALLCGPGFVEHAVAIDRDATELRLHG 240 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 + P+F+R A+ + ++NGR ++DK + +R A+++ + GR+P VL LE+DP +V Sbjct: 241 WVAQPSFSRSQADLQHFYVNGRYIRDKLVAHAVRQAFSDVLYQGRHPAFVLYLELDPAEV 300 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS-------------------- 335 DVNVHP K +RFR+ + +FI ++ KA+ S +S Sbjct: 301 DVNVHPTKHEVRFRDGRSVHSFIYSTLHKALADIRPSDTSMPAQASSSPVSASAGRLDLL 360 Query: 336 --VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 L ++ + A T + S + Q + +E Sbjct: 361 TGELVRQREMGLVEQGAGTTAVFSEHGSRGDFQSGRGSSTGFDAATAASYQQLYGSAEGR 420 Query: 394 DPVEESEATHYQL-GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + V E +A G A AQ+H YI++Q +GLV+VD HAAHER+ +E+++Q + I Sbjct: 421 NGVAEGDAAEVPPLGYALAQLHGVYILAQNREGLVLVDMHAAHERITYERLKQARDEQGI 480 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 SQ LL P+ + + E L+ EH LG++ + G ++ IREIP L N+ +L Sbjct: 481 RSQPLLVPQSVSVSSREALLLEEHASLFQSLGLRVDIAGEESLIIREIPVSLQGANVEEL 540 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 LRD++ ++++ T+ + + +L+TMAC+GS+R+ R++ EMN LLR+ME S Q Sbjct: 541 LRDVLADLLEYGTSERIARHEDELLSTMACHGSVRANRRLTVPEMNALLRDMEITERSGQ 600 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+ L + ++++LF R Sbjct: 601 CNHGRPTWTSLSVQELDRLFLR 622 >gi|306845535|ref|ZP_07478104.1| DNA mismatch repair protein MutL [Brucella sp. BO1] gi|306273856|gb|EFM55683.1| DNA mismatch repair protein MutL [Brucella sp. BO1] Length = 623 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 271/622 (43%), Positives = 392/622 (63%), Gaps = 28/622 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ IKEL+EN++DA ++R+E V AGGGK+ ++TDNG Sbjct: 1 MTIRHLSETIINQIAAGEVIERPASVIKELVENAIDAGATRIEVVTAGGGKTLLRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++E+ +AV RHCTSK++DD +I GFRGEALPSIG+VS LTL SR ++G + Sbjct: 61 SGIPADELALAVSRHCTSKLTDDVHDIRALGFRGEALPSIGSVSKLTLKSRSQDADSGFE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ++G + RP A+N GTIVEVRDLF+ PARL F+K+++ E ITDV++R+ IA+P Sbjct: 121 VCVTGGHLDGPRPTALNRGTIVEVRDLFYATPARLKFMKTDRAEATAITDVVKRIGIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ + ++M + ERI QV+G +F NA+ ++ + + + L G+ GI Sbjct: 181 HIRFSLAGTDRTPFEMPATGTGAEATLERIGQVLGREFGENALAIDAERDGVRLAGFVGI 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNRGNA + ++NGR V+DK I +R AY++ I R+PV VL L +DP VDVNV Sbjct: 241 PSFNRGNALHQFAYVNGRPVRDKQIFGALRGAYSDVIARDRHPVAVLFLTLDPALVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-NAPKTHLPKY 358 HPAK+ +RFR+P ++R I+ +I++A+ + GI ++ ++ M+ +F + + P+ Sbjct: 301 HPAKADVRFRDPGLVRGLIVGAIKQALAQSGIRPATSGAEAMLQAFRAEGFGAQQSAPRP 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE--------------------- 397 A S + + R + + Sbjct: 361 ANSYSPASWRTAPPAPRSEWSPQTAHPAHRPLDLQAAPAFRENEQAVLGDVAVPAADARA 420 Query: 398 -----ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 E LG A AQIH+NYI++QT D LVIVDQHAAHERL++E ++ ++ I Sbjct: 421 SVAEVPVELMQKPLGAARAQIHENYIVAQTEDSLVIVDQHAAHERLVYEALKNALHARPI 480 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 Q LL PEI+DL E + + H E L R G+ E+FGP AIA+RE PA+L + N+ QL Sbjct: 481 AGQMLLIPEIVDLPEEDAQRLAGHAETLARFGLGVEQFGPGAIAVRETPAMLGEMNVQQL 540 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 +RD+ DEI + T L+ + ++ ATMAC+GS+RSGR+++ EMN LLR+ME P S Sbjct: 541 IRDLADEIAEHDTADGLKAMLHHVAATMACHGSVRSGRRLKPEEMNALLRDMEATPGSGT 600 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+I+LKL+DIE+LFGR Sbjct: 601 CNHGRPTYIELKLTDIERLFGR 622 >gi|114763561|ref|ZP_01442966.1| DNA mismatch repair protein [Pelagibaca bermudensis HTCC2601] gi|114543841|gb|EAU46853.1| DNA mismatch repair protein [Roseovarius sp. HTCC2601] Length = 621 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 260/621 (41%), Positives = 399/621 (64%), Gaps = 28/621 (4%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 M+ IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA + RV +A GGK+ ++TD Sbjct: 1 MRPIIRQLDDSAINRIAAGEVVERPASAVKELVENAIDAGARRVTIELADGGKTLIRVTD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 +G GM+++E+P+A+ RH TSKI D NIH+FGFRGEALPS+GAV LT+ SR Sbjct: 61 DGCGMSADELPLALSRHATSKIDGSDLLNIHSFGFRGEALPSLGAVGRLTIQSRASGEE- 119 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 A+IA++G ++++V+P A+N GT+V +RDLFF PARL FL+S++ E I++VI+R+A+ Sbjct: 120 AAEIAVAGGQMAAVKPCALNGGTVVTLRDLFFATPARLKFLRSDRAEMQAISEVIKRLAM 179 Query: 178 AYPKVSFTFS--TIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEI 231 A P V FT + +R +G+ + R++QV+G +F +NA+ ++ + Sbjct: 180 AEPSVGFTLRDVSEGKDRTTFRADPCSGDLFDALRGRLAQVMGAEFTDNALNIDAEREGF 239 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 L G +PT++RG++ ++F+NGR VQD+ +L +R AYA+ + R+P V L ++ D Sbjct: 240 RLTGLAALPTYSRGSSVAQHLFVNGRPVQDRLLLGALRGAYADYLSRERHPAVALFVDCD 299 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 P +VDVNVHPAKS +RFR P ++R I+ +++ A+ + G S+ ++ + + + + Sbjct: 300 PHKVDVNVHPAKSEVRFREPGLVRGLIVSALRHALAEAGHRASTTVAGATLGAMRPEPSG 359 Query: 352 KTHLPK---------------YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 + + A + F + ++S DPV Sbjct: 360 PPRVYQMDRPSQGALSSAYRAQAPMTPAEPYQPFEAQAPRPAETGFAEFAGSFSGRVDPV 419 Query: 397 EESEATHYQL---GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 EES + G A Q+H+NYII+QT DG+VIVDQHAAHERL++EK++ + Sbjct: 420 EESPQGSDETLPLGAARGQVHENYIIAQTGDGIVIVDQHAAHERLVYEKLKHQMAERGVA 479 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 +Q LL PEI++L + + ++ +DL R+G+ E FG +A+A+RE PAIL + N LL Sbjct: 480 AQALLIPEIVELSADDLSRLLSIADDLSRMGLTIEAFGGSAVAVRETPAILGEVNAKALL 539 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 DI+DEI D ++ +Q++IE IL+ +AC+GSIRSGR+M++ EMN LLREME P+S QC Sbjct: 540 TDILDEIADFGSSQLVQEKIEAILSRVACHGSIRSGRRMRAEEMNALLREMEATPHSGQC 599 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 NHGRPT+++LKLSDIE+LFGR Sbjct: 600 NHGRPTYVELKLSDIERLFGR 620 >gi|254524173|ref|ZP_05136228.1| DNA mismatch repair protein MutL [Stenotrophomonas sp. SKA14] gi|219721764|gb|EED40289.1| DNA mismatch repair protein MutL [Stenotrophomonas sp. SKA14] Length = 634 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 221/626 (35%), Positives = 348/626 (55%), Gaps = 35/626 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L + +INQIAAGE++ERP+ +KEL+EN++DA +SRV+ + GG +I DNG Sbjct: 9 PIRPLPDILINQIAAGEVVERPASVVKELVENAIDAGASRVDIDLEEGGVRLIRIRDNGS 68 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+AV RH TSKI+D D ++ T GFRGEALPSI +VS TL SR + G+ Sbjct: 69 GIAPEQLPLAVSRHATSKIADLDDLESVATLGFRGEALPSIASVSRFTLASRRAHDEHGS 128 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G KI V P A PGT VEVR+LF+ +PAR FL++E+ E I + +R +A+A Sbjct: 129 ALQIEGGKIGEVTPRAHAPGTTVEVRELFYNVPARRKFLRAERTELGHIEEWLRSLALAR 188 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V S + + +++ +GEDF N AV ++ + L G+ Sbjct: 189 PDVELRVSHNGKASRRYKPGDLYSDAR--LAETLGEDFANQAVRVDHSGAGLRLHGWIAQ 246 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P ++R +A+Q Y+++NGR+V+D+ + ++ AY + + GR P VL LE+DP +VDVNV Sbjct: 247 PHYSRASADQQYLYVNGRSVRDRSVAHAVKMAYGDVLYHGRQPAYVLFLELDPTRVDVNV 306 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAI---------NKKGISTSSVLSKKMISSFHQDNA 350 HPAK +RFR+ ++ +F+ ++++ A+ + G + + A Sbjct: 307 HPAKHEVRFRDSRLVHDFVYRTLKDALADTRAGMSAQEIGALPAHPVDAATTPMASSAGA 366 Query: 351 PKTHLPKYATSLT-----------NTQEKLFLQ-----------ENRLSTNDLLPSDDPT 388 L + + Q+ L LQ S + + P Sbjct: 367 SGFGLVRGPAPGSGSGGGGGFSGWRPQQPLGLQVADAPAAYAALYAAPSGAERGATLPPM 426 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 SE+ PV ++A LG A AQ+H YI+++ +GL++VD HAAHER+ +E+++ + Sbjct: 427 PSENGLPVTSADAGVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKNAHD 486 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + SQ LL P + + E E E L LG + R GP A+ +R IPA+L+ Sbjct: 487 GIGLQSQPLLVPITLAVGEREADTAESEAETLAALGFEVTRAGPGALHVRSIPALLAHAE 546 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 LLRD++ ++ + + + + +L+TMAC+G++R+ R++ EMN LLR+ME Sbjct: 547 PEGLLRDVLTDLREHGQSRRVASARDELLSTMACHGAVRANRRLTVPEMNALLRDMEITE 606 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ + L++I++ F R Sbjct: 607 RSGQCNHGRPTWARFSLAEIDRWFLR 632 >gi|163745482|ref|ZP_02152842.1| DNA mismatch repair protein [Oceanibulbus indolifex HEL-45] gi|161382300|gb|EDQ06709.1| DNA mismatch repair protein [Oceanibulbus indolifex HEL-45] Length = 623 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 253/609 (41%), Positives = 380/609 (62%), Gaps = 18/609 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA + R+ A GGK+ ++TD+G G Sbjct: 15 IRQLDDSAINRIAAGEVVERPASAVKELVENAIDAGARRITVEYADGGKTMIRVTDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + +++ +A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR GA+I Sbjct: 75 IAPDDLALALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLTITSRAAGFE-GAEI 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 + G ++ RP A+N GTIV +RDLFF PARL FL++++ E I DVI+R+A+A P Sbjct: 134 TVDGGRMGEARPAALNSGTIVTLRDLFFATPARLKFLRTDRAEAQAIGDVIKRLAMAEPF 193 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQ 234 V F S R ++ G+ E R++QV+G +F N++ ++ + L Sbjct: 194 VRFVLRDVSGDGKGRDVFRAEAEQGDLFEALHGRLAQVLGREFAENSLPIDAMREGLHLT 253 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G+ +PT++RG+A Y+F+NGR V+DK + +R AY++ + R+P L +E P Sbjct: 254 GFAALPTYSRGSAVAQYLFVNGRPVRDKLLTGALRGAYSDFLSRDRHPAAALFVECPPTL 313 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT- 353 VDVNVHPAKS +RFR+P + R I+ +++ A+ + G S+ +++ + + + Sbjct: 314 VDVNVHPAKSEVRFRDPGLARGLIVSALRHALAEAGHRASTTVAQATLGAMQPEPQGARV 373 Query: 354 --------HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 P A + + + + + E+ A Y Sbjct: 374 YQMDRAGMDRPSPAARQAAYEAQAPGFAETAGVWGRVEGTPMPAAPVVEEASEAPAPDYP 433 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 LG A Q+H+NYII+QT +G+VIVDQHAAHERL++EK+++ N + +Q LL PEI++L Sbjct: 434 LGTARGQVHENYIIAQTANGMVIVDQHAAHERLVYEKLKRQMNDNGVAAQALLIPEIVEL 493 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 +CA ++E +DL +LG+ E FG +AIA+RE PAIL N L+ D++DE+ D + Sbjct: 494 SANDCARLLELADDLAKLGLGIEAFGGSAIAVRETPAILGTVNARALILDVLDELADGDS 553 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 + +Q +IE IL+ +AC+GSIRSGR M++ EMN LLREME P+S QCNHGRPT+++LKL Sbjct: 554 SNIVQAKIEAILSRVACHGSIRSGRWMRAEEMNALLREMEATPHSGQCNHGRPTYVELKL 613 Query: 586 SDIEKLFGR 594 +DIE+LFGR Sbjct: 614 ADIERLFGR 622 >gi|260166999|ref|ZP_05753810.1| DNA mismatch repair protein [Brucella sp. F5/99] gi|261756386|ref|ZP_06000095.1| DNA mismatch repair protein mutL [Brucella sp. F5/99] gi|261736370|gb|EEY24366.1| DNA mismatch repair protein mutL [Brucella sp. F5/99] Length = 623 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 272/622 (43%), Positives = 394/622 (63%), Gaps = 28/622 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ IKEL+EN++DA ++R+E V AGGGK+ ++TDNG Sbjct: 1 MTIRHLSETIINQIAAGEVIERPASVIKELVENAIDAGATRIEVVTAGGGKTLLRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++E+ +AV RHCTSK++DD +I GFRGEALPSIG+VS LTL SRP ++G + Sbjct: 61 SGIPADELALAVSRHCTSKLTDDVHDIRALGFRGEALPSIGSVSKLTLKSRPQDADSGFE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ++G + RP A+N GTIVEVRDLF+ PARL F+K+++ E ITDV++R+ IA+P Sbjct: 121 VCVTGGHLDGPRPTALNRGTIVEVRDLFYATPARLKFMKTDRAEATAITDVVKRIGIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ + ++M + ERI QV+G +F NA+ ++ + + + L G+ GI Sbjct: 181 HIRFSLAGTDRTPFEMPATGTGAEATLERIGQVLGREFGENALAIDAERDGVRLAGFVGI 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNRGNA + ++NGR V+DK I +R AY++ I R+PV VL L +DP VDVNV Sbjct: 241 PSFNRGNALHQFAYVNGRPVRDKQIFGALRGAYSDVIARDRHPVAVLFLTLDPALVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-NAPKTHLPKY 358 HPAK+ +RFR+P ++R I+ +I++A+ + GI ++ ++ M+ +F + + P+ Sbjct: 301 HPAKADVRFRDPGLVRGLIVGAIKQALAQSGIRPATSGAEAMLQAFRAEGFGAQQSAPRP 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTY--------------------------SED 392 A S + + R + + Sbjct: 361 ANSYSPASWRTAPPAPRSEWSPQTAHPAHRPLDLQAAPALRENGQAVLGDVAVPAADARA 420 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + E LG A AQIH+NYI++QT D LVIVDQHAAHERL++E ++ ++ I Sbjct: 421 SVAEAPVELMQKPLGAARAQIHENYIVAQTEDSLVIVDQHAAHERLVYEALKNALHARPI 480 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 Q LL PEI+DL E + + H E L R G+ E+FGP AIA+RE PA+L + N+ QL Sbjct: 481 AGQMLLIPEIVDLPEEDAQRLAGHAETLARFGLGVEQFGPGAIAVRETPAMLDEMNVQQL 540 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 +RD+ DEI + T L+ + ++ ATMAC+GS+RSGR+++ EMN LLR+ME P S Sbjct: 541 IRDLADEIAEHDTADGLKAMLHHVAATMACHGSVRSGRRLKPEEMNALLRDMEATPGSGT 600 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+I+LKL+DIE+LFGR Sbjct: 601 CNHGRPTYIELKLTDIERLFGR 622 >gi|197106626|ref|YP_002132003.1| DNA mismatch repair protein MutL [Phenylobacterium zucineum HLK1] gi|238690138|sp|B4RA70|MUTL_PHEZH RecName: Full=DNA mismatch repair protein mutL gi|196480046|gb|ACG79574.1| DNA mismatch repair protein MutL [Phenylobacterium zucineum HLK1] Length = 622 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 239/621 (38%), Positives = 370/621 (59%), Gaps = 27/621 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L ++IN+IAAGE++ERP+ A+KEL+EN+LDA ++++E GGG + + D+G Sbjct: 1 MPIRRLPPELINRIAAGEVVERPASAVKELVENALDAGATKIEVQADGGGLTRILVADDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD------DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ 114 G+++EE+P+AV+RH TSK++ D I T GFRGEALPSIG+V+ L++ SR + Sbjct: 61 CGLSAEELPVAVERHATSKLNPGEDGEYDLLRIGTLGFRGEALPSIGSVARLSIASRARK 120 Query: 115 NNTGAQIAISGEKI------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLI 168 + A + S G VEVRDLF+ PARL F+KSE+ E I Sbjct: 121 ADGSQAEAHAIFVEGGAVGAVSPAAFPGPHGARVEVRDLFYATPARLKFMKSERAEALAI 180 Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEK 227 T+ ++R A+A+ VSF ++ ++ + R+S ++G +F +NA+ ++ + Sbjct: 181 TEELKRQAMAHEAVSFALDVDGRRTLRLPAEAAGPDGRLARLSAIMGREFSDNALAIDHE 240 Query: 228 SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLL 287 + L G+ G+PTFNRGNA Y+F+NGR V+D+ + +R AYA+ + R+P+ L Sbjct: 241 REGVRLSGFAGLPTFNRGNAAHQYLFVNGRPVRDRLLQGALRAAYADFLARDRHPLAALY 300 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH- 346 +E+DP QVDVNVHPAK+ +RFR+P ++R I+ ++ A+ G S+ +S + F Sbjct: 301 VELDPSQVDVNVHPAKAEVRFRDPGLVRGLIVGGLRHALAAAGHRASTTVSMAALGGFRP 360 Query: 347 -------------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P A + L R L +E Sbjct: 361 QSMPPPQPSAAGFSAWRQGGWTPSPAAAAAQILPGLSEVSARAEPEALDAYAAGGMAEAA 420 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 P + Y LG A AQ+H+ YI++QT DG+VIVDQHAAHERL++E+M+ + + Sbjct: 421 SPAPVFDPVDYPLGAARAQVHETYIVAQTRDGVVIVDQHAAHERLVYERMKAEMAEGGVA 480 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 Q LL PE+++L E ++ ++L LG+ E FGP A+ +RE+PA+L + + L+ Sbjct: 481 RQALLLPEVVELDPAEAERVVARADELAALGLVVEAFGPGAVLVREVPALLGETDAAGLV 540 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 RDI D++ ++ L++R+E + TMAC+GS+R+GR++ + EMN LLR+ME P+S QC Sbjct: 541 RDIADDLSENGQALALKERLEEVCGTMACHGSVRAGRRLTAPEMNALLRQMEATPHSGQC 600 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 NHGRPT+++LKL+DIE+LFGR Sbjct: 601 NHGRPTYVELKLADIERLFGR 621 >gi|15964569|ref|NP_384922.1| DNA mismatch repair protein [Sinorhizobium meliloti 1021] gi|307309315|ref|ZP_07588978.1| DNA mismatch repair protein MutL [Sinorhizobium meliloti BL225C] gi|307320051|ref|ZP_07599472.1| DNA mismatch repair protein MutL [Sinorhizobium meliloti AK83] gi|20455110|sp|Q92RP4|MUTL_RHIME RecName: Full=DNA mismatch repair protein mutL gi|15073747|emb|CAC45388.1| Probable DNA mismatch repair protein [Sinorhizobium meliloti 1021] gi|306894266|gb|EFN25031.1| DNA mismatch repair protein MutL [Sinorhizobium meliloti AK83] gi|306900184|gb|EFN30802.1| DNA mismatch repair protein MutL [Sinorhizobium meliloti BL225C] Length = 605 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 286/606 (47%), Positives = 409/606 (67%), Gaps = 14/606 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++LSE +INQIAAGE+IERP+ A KELIEN+LDA ++R+E AGGGK+ ++TDNG Sbjct: 1 MAIKQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEIATAGGGKTLLRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM+ ++ +A++RHCTSK++D ++I T GFRGEALPSIG+V+ L++ +R + GA Sbjct: 61 IGMSPADLELAIRRHCTSKLNDSLADIRTLGFRGEALPSIGSVARLSITTRTAEAREGAA 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++G + RP A GT+VEVRDLFF PARL F+KSE+ E I++V+RRMAIA+P Sbjct: 121 ITVTGGRSEPARPSAAIVGTVVEVRDLFFATPARLKFMKSEKAEAAAISEVVRRMAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V F S S+R + F +T + R++QV+G DF +NA+E++ + L G+ G+P Sbjct: 181 RVRFVLS--GSDRTTLEFPATGDDRLARMAQVLGRDFRDNAIEIDAEREGARLTGFAGVP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGN+ Q Y F+NGR VQDK I+S +R AYAETIP GRYP+ VL + +DP VDVNVH Sbjct: 239 TFNRGNSLQQYAFVNGRPVQDKLIMSALRAAYAETIPQGRYPIAVLSITLDPALVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV----LSKKMISSFHQDNAPKTHLP 356 PAKS +RFR+P +IR II +I++A+ ++G ++ L + FH+ + P Sbjct: 299 PAKSDVRFRDPGLIRGLIIGAIREALTREGDRAATTGAHGLMRAFRPEFHRAGQQRPQEP 358 Query: 357 KYATSLTNTQ------EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT--HYQLGI 408 A + + + F + + + +D + + + ++ + LG Sbjct: 359 WSAAASPHRPLRFEEAARGFAEAPQAAFSDFAQPSARSAAAAVEATRATDGQAASFPLGA 418 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 A AQ+H+NYI++QT DGLVIVDQHAAHERL+FE MR ++ + +Q LL PEI+ L E Sbjct: 419 ARAQLHENYIVAQTDDGLVIVDQHAAHERLVFETMRTALHARPVPAQALLIPEIVGLPED 478 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 +C +M H E+ RLG+ ERFGP A+A+RE PA+L + + L+R + DE+ + T Sbjct: 479 DCDRLMAHAEEFTRLGLAIERFGPAAVAVRETPAMLGEMDAAGLVRQLADELAEWDTASG 538 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 L R+E + ATMAC+GS+RSGR++++ EMN LLR+ME P S QCNHGRPT+I+LKL+DI Sbjct: 539 LAGRLEYLAATMACHGSVRSGRRLRTEEMNALLRQMEATPGSGQCNHGRPTYIELKLADI 598 Query: 589 EKLFGR 594 E+LFGR Sbjct: 599 ERLFGR 604 >gi|325916959|ref|ZP_08179201.1| DNA mismatch repair protein MutL [Xanthomonas vesicatoria ATCC 35937] gi|325536810|gb|EGD08564.1| DNA mismatch repair protein MutL [Xanthomonas vesicatoria ATCC 35937] Length = 623 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 224/624 (35%), Positives = 347/624 (55%), Gaps = 33/624 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +INQIAAGE++ERP+ +KEL+EN+LDA ++RV+ + GG +I DNG Sbjct: 1 MAIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIDLEEGGVRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TL+SR G Sbjct: 61 GGIPPHELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLISRRHDAQHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 A + I G ++ V P A PGT VEVR+LFF +PAR FL++E+ E I + +R +A+A Sbjct: 121 AALQIEGGRLGEVTPHAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V S + + + + +GEDF A+ ++ + L G+ Sbjct: 181 RPDVELRVSHNGKPSRRYKPGDLYSDAR--LGETLGEDFARQALRVDHSGAGLRLHGWVA 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R + +Q Y+++NGR+V+D+ + ++ AY + + GR P VL LE+DP +VDVN Sbjct: 239 QPHYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV-----------------LSKKM 341 VHPAK +RFR +I +F+ +++Q A+ + + L Sbjct: 299 VHPAKHEVRFREARLIHDFVYRTLQDALAQTRAGATPNSIGNDGAGYLAAGGMGNLPGGA 358 Query: 342 ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ--ENRLSTNDL---------LPSDDPTYS 390 ++ + YA T +Q L L+ E R + + L S P +S Sbjct: 359 VTPYTGTPGNGGGSGSYAN-WTPSQSPLGLRVDEARAAYSALYAPLPGSVQQSSSLPQFS 417 Query: 391 EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 PV ++ LG A AQ+H YI+++ +GL++VD HAAHER+ +E+++ +S Sbjct: 418 GTGLPVTAEDSGVPPLGYAVAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKHAHDSI 477 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 + +Q LL P + + E E E L LG + R GP ++ +R IPA+L+ Sbjct: 478 GLHAQPLLVPMTLAVGEREADTAEREAETLGTLGFEITRAGPQSLHVRSIPALLANAEPE 537 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 LLRD++ ++ + + + + +L+TMAC+G++R+ R++ EMN LLR+ME S Sbjct: 538 ALLRDVLGDLREHGQSRRIASARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATERS 597 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+ + LSDI++ F R Sbjct: 598 GQCNHGRPTWARFTLSDIDRWFLR 621 >gi|221640592|ref|YP_002526854.1| DNA mismatch repair protein [Rhodobacter sphaeroides KD131] gi|221161373|gb|ACM02353.1| DNA mismatch repair protein MutL [Rhodobacter sphaeroides KD131] Length = 616 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 256/602 (42%), Positives = 381/602 (63%), Gaps = 11/602 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E IN+IAAGE++ERP+ A+KEL+EN+LDA + R+ IA GGK+ ++TD+G G Sbjct: 15 IRQLDEAAINRIAAGEVVERPASAVKELVENALDAGARRIAVDIACGGKTLIRVTDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT++++P+A+ RH TSKI D +I +FGFRGEALPS+ AV LT+ SR + GAQI Sbjct: 75 MTADDLPLALSRHATSKIDGSDLLDIRSFGFRGEALPSLAAVGRLTITSRVAEGE-GAQI 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 A+S +I VRP A+ GT+VE+RDLFF PARL FL++++ ET I +V+RR+A+A P+ Sbjct: 134 AVSAGRIEPVRPAALGAGTVVELRDLFFATPARLKFLRTDRAETQAIAEVVRRLALAEPE 193 Query: 182 VSFTFSTI--KSNRYKMNFQSTNGNF----PERISQVIGEDFINNAVELNEKSNEITLQG 235 V FT + R ++ G+ R+++V+G +F NA+ ++ + LQG Sbjct: 194 VGFTLTDHSAGEPRLLFRAEAEGGDLFDALHRRVARVVGAEFAENALRIDVAREGLRLQG 253 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y +PT++RG+ ++F+NGR V D+ +L +R Y + + RYP VL L DP++V Sbjct: 254 YAALPTYSRGSGVAQFLFVNGRPVLDRMLLGALRAGYMDVLSRDRYPAAVLNLICDPQRV 313 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHPAK+ +RFR +R I+ ++++A+ G S+ ++ + + +F + Sbjct: 314 DVNVHPAKAEVRFREAGEVRGLIVTALRQALAGAGHRASTTVAGETLEAFRPERPAAAGP 373 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE---SEATHYQLGIACAQ 412 + + + P+ VE EA LG A AQ Sbjct: 374 GSASRIYQMDRPSAAAVARSFAFQAPEPAMPGLAEAPAARVEAPAAEEAHDRPLGAARAQ 433 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 IH N+I++QT GLVIVDQHAAHERL++EK+++ + T I Q LL PEI++L + A Sbjct: 434 IHGNWILAQTESGLVIVDQHAAHERLVYEKLKRQRDETGIARQALLIPEIVELSPTDAAR 493 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 ++E ++L G+ E FG A+A+RE+PAIL K LLRDI+D++ D ++ LQ R Sbjct: 494 LLEAADELASAGLVIEPFGGGAVAVREVPAILGKVEAAPLLRDILDDLADLGSSDRLQAR 553 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 ++ +L+ MAC+GS+RSGR +++ EMN LLREME P S QCNHGRPT+++LKL+DIE+LF Sbjct: 554 MDAVLSRMACHGSVRSGRALRAEEMNALLREMEATPLSGQCNHGRPTYVELKLADIERLF 613 Query: 593 GR 594 GR Sbjct: 614 GR 615 >gi|119385437|ref|YP_916493.1| DNA mismatch repair protein [Paracoccus denitrificans PD1222] gi|119375204|gb|ABL70797.1| DNA mismatch repair protein MutL [Paracoccus denitrificans PD1222] Length = 606 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 266/601 (44%), Positives = 395/601 (65%), Gaps = 9/601 (1%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 M+ IR+L E N+IAAGE++ERP+ A+KEL+EN+LDA +SR+E IA GGK+ +++D Sbjct: 8 MRPIIRQLDEAAANRIAAGEVVERPASAVKELVENALDAGASRIEVAIAKGGKALIRVSD 67 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 +G GMT+E++P+A+ RH TSKI D +I +FGFRGEALPS+GAV L++ SR + Sbjct: 68 DGCGMTAEDLPLALARHATSKIDGSDLLDIRSFGFRGEALPSLGAVGRLSITSRAAGFD- 126 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 GAQIA++G +I V+P A N GT+VE+RDLFF PARL FL+S++ ET + +VIRR+A+ Sbjct: 127 GAQIAVAGGRIGPVKPAAGNRGTVVELRDLFFATPARLKFLRSDRAETQAVAEVIRRLAM 186 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNF----PERISQVIGEDFINNAVELNEKSNEITL 233 A P V FT S R + G R+++V+G DFI+NA+ ++ + ITL Sbjct: 187 AEPYVGFTLSDEDEGRVLFRADAEQGELFGALQTRLARVMGRDFIDNALAVDATRDGITL 246 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G+ +PT++RG A ++++NGR V+DK + +R Y + + GR+P VL L DP Sbjct: 247 TGFAALPTYSRGAAVAQHLYVNGRPVRDKLLTGALRAGYMDVLASGRHPAAVLFLTCDPH 306 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 QVDVNVHPAK+ +RFR P I R ++ +++ A+ G SS ++ + + + A + Sbjct: 307 QVDVNVHPAKAEVRFREPDIARGLVVSALRHALAGAGHRASSTVAMAALGAARPEPASEQ 366 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 +Y S + L+ ++ PT + P E T LG A AQ+ Sbjct: 367 PR-RYQASYAPARPSAPAIAASLAFQAPGFAEAPTARVEPQPEALPEPTQAPLGAARAQL 425 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H+N+I++QT DG+VIVDQHAAHERL++E+++ ++T I SQ LL PEI++L E + I Sbjct: 426 HENWIVAQTADGIVIVDQHAAHERLVYERLKAQLDATGIASQALLIPEIVELSEADAHRI 485 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 + +L LG+ E FG A+A+RE+PA++ + N L+RDI+D++ D + L+ R+ Sbjct: 486 LAIAGELAALGLVIEPFGGGAVAVREVPALIQRLNAAALIRDILDDLADQGASDRLRARV 545 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + +L++MAC+GS+RSGR+M + EMN LLREME+ P S QCNHGRPT+I+LKL+DIE+LFG Sbjct: 546 DAVLSSMACHGSVRSGRRMSADEMNALLREMERVPKSGQCNHGRPTWIELKLADIERLFG 605 Query: 594 R 594 R Sbjct: 606 R 606 >gi|254719953|ref|ZP_05181764.1| DNA mismatch repair protein [Brucella sp. 83/13] gi|265984961|ref|ZP_06097696.1| DNA mismatch repair protein mutL [Brucella sp. 83/13] gi|306838542|ref|ZP_07471380.1| DNA mismatch repair protein MutL [Brucella sp. NF 2653] gi|264663553|gb|EEZ33814.1| DNA mismatch repair protein mutL [Brucella sp. 83/13] gi|306406409|gb|EFM62650.1| DNA mismatch repair protein MutL [Brucella sp. NF 2653] Length = 623 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 271/622 (43%), Positives = 393/622 (63%), Gaps = 28/622 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ IKEL+EN++DA ++R+E V AGGGK+ ++TDNG Sbjct: 1 MTIRHLSETIINQIAAGEVIERPASVIKELVENAIDAGATRIEVVTAGGGKTLLRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++E+ +AV RHCTSK++DD +I GFRGEALPSIG+VS LTL SRP ++G + Sbjct: 61 SGIPADELALAVSRHCTSKLTDDVHDIRALGFRGEALPSIGSVSKLTLKSRPQDADSGFE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ++G + RP A+N GTIVEVRDLF+ PARL F+K+++ E ITDV++R+ IA+P Sbjct: 121 VCVTGGHLDGPRPTALNRGTIVEVRDLFYATPARLKFMKTDRAEATAITDVVKRIGIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ + ++M + ERI QV+G +F NA+ ++ + + + L G+ GI Sbjct: 181 HIRFSLAGTDRTPFEMPATGTGAEATLERIGQVLGREFGENALAIDAERDGVRLAGFVGI 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNRGNA + ++NGR V+DK I +R Y++ I R+PV VL L +DP VDVNV Sbjct: 241 PSFNRGNALHQFAYVNGRPVRDKQIFGALRGTYSDVIARDRHPVAVLFLTLDPALVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-NAPKTHLPKY 358 HPAK+ +RFR+P ++R I+ +I++A+ + GI ++ ++ M+ +F + + P+ Sbjct: 301 HPAKADVRFRDPGLVRGLIVGAIKQALAQSGIRPATSGAEAMLQAFRAEGFGAQQSAPRP 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDP--------------------------TYSED 392 A S + + R + + Sbjct: 361 ANSYSPASWRTAPPAPRSEWSPQTAHPAHRPLDLQAAPAFRENGQAVLGDVAAPAADARA 420 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + E LG A AQIH+NYI++QT D LVIVDQHAAHERL++E ++ ++ I Sbjct: 421 SVAEAPVELMQKPLGAARAQIHENYIVAQTEDSLVIVDQHAAHERLVYEALKNALHARPI 480 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 Q LL PEI+DL E + + H E L R G+ E+FGP AIA+RE PA+L + N+ QL Sbjct: 481 AGQILLIPEIVDLPEEDAQRLAGHAETLARFGLGVEQFGPGAIAVRETPAMLGEMNVQQL 540 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 +RD+ DEI + T L+ + ++ ATMAC+GS+RSGR+++ EMN LLR+ME P S Sbjct: 541 IRDLADEIAEHDTADGLKAMLHHVAATMACHGSVRSGRRLKPEEMNALLRDMEATPGSGT 600 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+I+LKL+DIE+LFGR Sbjct: 601 CNHGRPTYIELKLTDIERLFGR 622 >gi|209966848|ref|YP_002299763.1| DNA mismatch repair protein MutL, putative [Rhodospirillum centenum SW] gi|209960314|gb|ACJ00951.1| DNA mismatch repair protein MutL, putative [Rhodospirillum centenum SW] Length = 617 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 239/616 (38%), Positives = 366/616 (59%), Gaps = 22/616 (3%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M +R+L E+++N+IAAGE++ERP+ A+KEL+EN+LDA +SR+E V+ GGK+ + D+ Sbjct: 1 MPTLRRLPERLVNRIAAGEVVERPAAAVKELVENALDAGASRIEVVLRDGGKALIGVADD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G GM EE+ +AV+RH TSK+ DD ++I T GFRGEALPSIGAVS L++ SRP ++ Sbjct: 61 GCGMAPEELELAVERHATSKLPDDDLTHIRTLGFRGEALPSIGAVSRLSITSRPRGADSA 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I + G V P A GT +EVRDLF+ PARL FLK + E+ D + R+A+A Sbjct: 121 HAILVEGGAKGPVMPAAGGIGTRIEVRDLFYATPARLKFLKGNRTESEHARDAVERLAMA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQST--NGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 +P V+F + ++ + R+ V+G +F NA+ ++ + L G+ Sbjct: 181 HPHVTFLLTDEGRTPLRLPAATGDLMEARLVRLGAVLGREFQENALPVDAARGPVRLVGH 240 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 G+PT NR A Y+F+NGR V+D+ ++ +R AYA+ + R+P++ L LE+ P +VD Sbjct: 241 IGLPTLNRPTAAGQYLFVNGRPVKDRLLVGAVRGAYADFLARDRHPMLALFLELPPEEVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS-------VLSKKMISSFHQDN 349 VNVHPAK+ +RFR+ ++R I+ +++ A+ + G S+ + Sbjct: 301 VNVHPAKTEVRFRDQALVRGLIVGALKHALAQAGHRASTGVAAAALASFAPHDAPLPPPV 360 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE----------S 399 + A L E ++ N LP S D + Sbjct: 361 QSALPWQRPAGGFAPAAVPRGLAEMAMAFNAPLPGSPVPASAPPDGLHPAAPVEATTGTE 420 Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 A + LG A AQ+H YI++QT DG+VIVDQHAAHERL++E+M+ D + + Q LL Sbjct: 421 PARAFPLGAARAQLHTTYIVAQTEDGIVIVDQHAAHERLVYERMKHDLLAGGVKRQGLLI 480 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS-KKNIPQLLRDIID 518 PE+++L + + E +L LG+ E FG + +RE+PA+L + ++ L+RD+ D Sbjct: 481 PEVVELDPADAERLGERAAELAELGLVLEPFGTGCVVVREVPALLGARADVRGLVRDLAD 540 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 E+ + L++R+E + + MAC+GS+R+GR M + EMN LLR+ME P+S QCNHGRP Sbjct: 541 ELAELGDALALKERLEAVCSRMACHGSVRAGRPMNADEMNALLRQMEATPHSGQCNHGRP 600 Query: 579 TFIKLKLSDIEKLFGR 594 T+++LKL+DIE+LFGR Sbjct: 601 TYVELKLADIERLFGR 616 >gi|15837362|ref|NP_298050.1| DNA mismatch repair protein [Xylella fastidiosa 9a5c] gi|20455160|sp|Q9PFB8|MUTL_XYLFA RecName: Full=DNA mismatch repair protein mutL gi|9105652|gb|AAF83570.1|AE003917_4 DNA mismatch repair protein MutL [Xylella fastidiosa 9a5c] Length = 619 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 216/619 (34%), Positives = 346/619 (55%), Gaps = 27/619 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +INQIAAGE+++RP+ +KEL+EN++DA ++RV+ + G +I DNG Sbjct: 1 MPIRQLPEILINQIAAGEVVQRPASVVKELVENAIDAGATRVDIELEAAGGRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM ++E+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TLMSR + G Sbjct: 61 HGMAAQELPLAVLRHATSKIASLDDLEAVATLGFRGEALPSIVSVSRFTLMSRRAMDEHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 A + I G + V P A PGT VEVRDLF+ +PAR FL++E+ E I + R +A+A Sbjct: 121 AVLQIEGGTLGEVIPHAHAPGTTVEVRDLFYNVPARRKFLRAERTELGHIEEWARSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P + S + + + +++GEDF + A+ ++ + L G Sbjct: 181 HPDLELRLSHNGKLSRRYKPGDWYSDAR--LIEILGEDFAHQALRVDHSGAGLRLHGCIV 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R N +Q Y+++NGR V+D+ + ++ AY++ + GR+P VL LE+DP +VDVN Sbjct: 239 QPHYSRSNTDQQYLYVNGRAVRDRSVAHAVKQAYSDVLYQGRHPAYVLFLELDPARVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK +RFR+ +I +F+ +++Q + + T + P H + Sbjct: 299 VHPAKQEVRFRDARLIHDFVYRTVQGTLAQTRAGTPPLAVGAGDVGGEGARPPVRHAVSF 358 Query: 359 AT----------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY---- 404 + S + + L +S D + Y+ V ++ Sbjct: 359 SGRRGGASHVLGSYSASTAPLMQSAPSVSVADAPAAYAALYAAPPTQVIDAVPQMQTGLP 418 Query: 405 ---------QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 LG A AQ+H YI+++ DGL++VD HAAHER+ +E++++ + + +Q Sbjct: 419 LAAGAGDVPPLGYAIAQLHGIYILAECADGLIVVDMHAAHERIGYERLKRAHDGIGLRTQ 478 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P + + E E + E L LG + R GP ++ +R IPA+L++ LLRD Sbjct: 479 PLLVPMTLMVAEREADVAECEAETLASLGFEVTRSGPGSLQVRSIPALLAQAEPEILLRD 538 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 ++ ++ + T + + + +LATMAC+G++R+ R++ EMN LLR+ME S QCNH Sbjct: 539 VLSDLSEHGHTRRVAEARDTLLATMACHGAVRAQRRLSISEMNALLRDMEATERSGQCNH 598 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRPT+ + L++I++ F R Sbjct: 599 GRPTWARFSLAEIDRWFLR 617 >gi|332559571|ref|ZP_08413893.1| DNA mismatch repair protein [Rhodobacter sphaeroides WS8N] gi|332277283|gb|EGJ22598.1| DNA mismatch repair protein [Rhodobacter sphaeroides WS8N] Length = 616 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 256/602 (42%), Positives = 381/602 (63%), Gaps = 11/602 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E IN+IAAGE++ERP+ A+KEL+EN+LDA + R+ IA GGK+ ++TD+G G Sbjct: 15 IRQLDEAAINRIAAGEVVERPASAVKELVENALDAGARRIAVDIACGGKTLIRVTDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT++++P+A+ RH TSKI D +I +FGFRGEALPS+ AV LT+ SR + GAQI Sbjct: 75 MTADDLPLALSRHATSKIDGSDLLDIRSFGFRGEALPSLAAVGRLTITSRVAEGE-GAQI 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 A+S +I VRP A+ GT+VE+RDLFF PARL FL++++ ET I +V+RR+A+A P+ Sbjct: 134 AVSAGRIEPVRPAALGAGTVVELRDLFFATPARLKFLRTDRAETQAIAEVVRRLALAEPE 193 Query: 182 VSFTFSTI--KSNRYKMNFQSTNGNF----PERISQVIGEDFINNAVELNEKSNEITLQG 235 V FT + R ++ G+ R+++V+G +F NA+ ++ + LQG Sbjct: 194 VGFTLTDHSAGEPRLLFRAEAEGGDLFDALHRRVARVVGAEFAENALRIDVAREGLRLQG 253 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y +PT++RG+ ++F+NGR V D+ +L +R Y + + RYP VL L DP++V Sbjct: 254 YAALPTYSRGSGVAQFLFVNGRPVLDRMLLGALRAGYMDVLSRDRYPAAVLNLICDPQRV 313 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHPAK+ +RFR +R I+ ++++A+ G S+ ++ + + +F + Sbjct: 314 DVNVHPAKAEVRFREAGEVRGLIVTALRQALAGAGHRASTTVAGETLEAFRPERPAAAGP 373 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE---SEATHYQLGIACAQ 412 + + + P+ VE EA LG A AQ Sbjct: 374 GPASRIYQMDRPSAAAVARSFAFQAPEPAMPGLAEAPAARVEAPVAEEAHDRPLGAARAQ 433 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 IH N+I++QT GLVIVDQHAAHERL++EK+++ + T I Q LL PEI++L + A Sbjct: 434 IHGNWILAQTESGLVIVDQHAAHERLVYEKLKRQRDETGIARQALLIPEIVELSPTDAAR 493 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 ++E ++L G+ E FG A+A+RE+PAIL K LLRDI+D++ D ++ LQ R Sbjct: 494 LLEAADELASAGLVIEPFGGGAVAVREVPAILGKVEAAPLLRDILDDLADLGSSDRLQAR 553 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 ++ +L+ MAC+GS+RSGR +++ EMN LLREME P S QCNHGRPT+++LKL+DIE+LF Sbjct: 554 MDAVLSRMACHGSVRSGRALRAEEMNALLREMEATPLSGQCNHGRPTYVELKLADIERLF 613 Query: 593 GR 594 GR Sbjct: 614 GR 615 >gi|89067221|ref|ZP_01154734.1| DNA mismatch repair protein [Oceanicola granulosus HTCC2516] gi|89046790|gb|EAR52844.1| DNA mismatch repair protein [Oceanicola granulosus HTCC2516] Length = 608 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 251/599 (41%), Positives = 379/599 (63%), Gaps = 12/599 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E IN+IAAGE++ERP+ A+KEL+EN++DA ++R+E A GGK ++TD+G G Sbjct: 14 IRQLDEAAINRIAAGEVVERPASAVKELVENAIDAGATRIEIDYADGGKRLIRVTDDGCG 73 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + +++P+A+ RH TSKI D I TFGFRGEALPS+GAV LT+ SR A I Sbjct: 74 IAGDDLPLALSRHATSKIDGSDLLEISTFGFRGEALPSLGAVGRLTITSRCGDA--AASI 131 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++G + +VRP A++ GT VE+RDLF PARL FL++++ E I + ++R+A+A P Sbjct: 132 TVTGGRAEAVRPAALSRGTRVELRDLFHATPARLKFLRTDRAEAQAIAETVKRLALAEPF 191 Query: 182 VSFTFS--TIKSNRYKMNFQSTNGNFPERI----SQVIGEDFINNAVELNEKSNEITLQG 235 V+FT + + S R + +G+ + + +QV+G DF NA+ L+ + L G Sbjct: 192 VAFTLTDLSGDSPRTVFRADAQSGDLFDALHGRTAQVLGRDFAANAIPLDAEREGHHLTG 251 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y +PT++RG++ Q ++F+NGR VQD+ ++ +R AY + + R+P VL ++ PR V Sbjct: 252 YAALPTYSRGSSVQQFLFVNGRPVQDRLLIGALRAAYMDVLSRDRHPAAVLFIDCAPRLV 311 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHPAKS +RFR+ +R I+ ++ A+ G SS ++ + +F + P Sbjct: 312 DVNVHPAKSQVRFRDGGSVRGLIVSGLRHALAGAGHRASSTVAGATLGAFRAEPGP---A 368 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 P + ++ + + P+ + LG A AQ+H+ Sbjct: 369 PANEPARVYQMDRPAPRAAMPPMPGFAEAPAPSARIEAPAAPAPGDERRPLGAARAQVHE 428 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 NYI++QT G+V+VDQHAAHERL++EK+++ I +Q LL PEI++L E +CAL++ Sbjct: 429 NYIVAQTETGIVLVDQHAAHERLVYEKLKRQSAENGIAAQALLIPEIVELSESDCALLLS 488 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 H + L LG+ E FG A+A+RE PA+L + + L+RDI+DE+ D + L+ RI+ Sbjct: 489 HADTLATLGLVLEPFGGGAVAVRETPALLGQVDAAALVRDILDELADLGESTALRARIDA 548 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 IL+ +AC+GSIRSGR+M++ EMN LLREME P S QCNHGRPT+++LKLSDIE+LFGR Sbjct: 549 ILSRVACHGSIRSGRQMRAEEMNALLREMEATPLSGQCNHGRPTYVELKLSDIERLFGR 607 >gi|192293214|ref|YP_001993819.1| DNA mismatch repair protein [Rhodopseudomonas palustris TIE-1] gi|238692573|sp|B3Q7Y9|MUTL_RHOPT RecName: Full=DNA mismatch repair protein mutL gi|192286963|gb|ACF03344.1| DNA mismatch repair protein MutL [Rhodopseudomonas palustris TIE-1] Length = 595 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 236/599 (39%), Positives = 368/599 (61%), Gaps = 10/599 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E I+N+IAAGE++ERP+ +KEL+EN++DA SSR++ GGG+ I D+G Sbjct: 1 MPVRQLPEIIVNRIAAGEVVERPASVVKELVENAIDAGSSRIDIFSDGGGRRKIVIADDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT+ ++ +AV RH TSK+ D D I T GFRGEALPSIGAV+ L++ +R Sbjct: 61 SGMTAADLALAVDRHATSKLDDEDLLQIRTLGFRGEALPSIGAVAKLSITTRHASEPHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + + P A++ GT VEV DLFF PARL FLK+++ E I +V+RR+A+A Sbjct: 121 TLRVEGGDKTPIAPAALSQGTRVEVADLFFATPARLKFLKTDRTEAEAIREVVRRLAMAR 180 Query: 180 PKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P ++FT + + R+ ++G DF NA+E+ + + ++G+ Sbjct: 181 PDIAFTLAGEERAPVTWAAALPGAPGQLIRLGDILGADFRANAIEVRAEREGVVVEGFAA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P + NA Y+F+NGR V+DK IL +R AY++ +P R+PVV L + +D R+VD N Sbjct: 241 SPALTKANALGQYLFVNGRPVRDKLILGAVRAAYSDYLPRDRHPVVALFVTLDSREVDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK+ +RFRN ++R I+ +++ + ++G T++ + +IS+F + P + Sbjct: 301 VHPAKTEVRFRNAGLVRALIVHALKDGLAREGRRTAANSAGSVISTFRPASMPPANWDWR 360 Query: 359 ATSLTN---TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 A+ + F + + + + PS D +E + LG A QIH+ Sbjct: 361 ASPSYPVGGSAAPSFAERAQAAFDVGAPSADIRPTEVT-----PDLLDRPLGAARTQIHE 415 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 YI+SQT DGL++VDQHAAHER+++E+++ + + Q LL P+I+++ E ++ Sbjct: 416 TYIVSQTRDGLIVVDQHAAHERIVYERLKASLEANGVQRQILLIPDIVEMDEATVERLVA 475 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 E+L + G+ E FGP A+A+RE P++L K + LLRD+ + + + L+ R+ + Sbjct: 476 RGEELAKFGLVIESFGPGAVAVRETPSLLGKTDAGGLLRDLAEHMAEWDEALPLERRLMH 535 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + ATMAC+GS+R+GR ++ EMN LLREME PNS QCNHGRPT+++L L+DIEKLFGR Sbjct: 536 VAATMACHGSVRAGRVLKPEEMNALLREMEATPNSGQCNHGRPTYVELTLTDIEKLFGR 594 >gi|194366527|ref|YP_002029137.1| DNA mismatch repair protein [Stenotrophomonas maltophilia R551-3] gi|194349331|gb|ACF52454.1| DNA mismatch repair protein MutL [Stenotrophomonas maltophilia R551-3] Length = 634 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 217/627 (34%), Positives = 345/627 (55%), Gaps = 36/627 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L + +INQIAAGE++ERP+ +KEL+EN++DA +SRV+ + GG +I DNG Sbjct: 8 PIRPLPDILINQIAAGEVVERPASVVKELVENAIDAGASRVDIDLEEGGVRLIRIRDNGS 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+AV RH TSKI+ DD ++ T GFRGEALPSI +VS TL SR + G+ Sbjct: 68 GIAPEQLPLAVSRHATSKIADLDDLESVATLGFRGEALPSIASVSRFTLSSRRAHDEHGS 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G KI V P A PGT VEVR+LF+ +PAR FL++E+ E I + +R +A+A Sbjct: 128 ALQIEGGKIGEVTPRAHAPGTTVEVRELFYNVPARRKFLRAERTELGHIEEWLRSLALAR 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V S + + +++ +GEDF N AV ++ + L G+ Sbjct: 188 PDVELRVSHNGKASRRYKPGDLYSDTR--LAETLGEDFANQAVRVDHSGAGLRLHGWIAQ 245 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P ++R +A+Q Y+++NGR+V+D+ + ++ AY + + GR P VL LE+DP +VDVNV Sbjct: 246 PHYSRASADQQYLYVNGRSVRDRSVAHAVKMAYGDVLYHGRQPAYVLFLELDPTRVDVNV 305 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +RFR+ ++ +F+ ++++ A+ S+ A A Sbjct: 306 HPAKHEVRFRDSRLVHDFVYRTLKDALADTRAGMSAQEIGAGAVHPVDAAAAPVASTAGA 365 Query: 360 TSLT---------------------NTQEKLFLQ-----------ENRLSTNDLLPSDDP 387 + Q+ L LQ S + + P Sbjct: 366 SGFGLVRGPAPGAGSGGGGGGFSGWRPQQPLGLQVADAPAAYAALYAAPSGAERGAALPP 425 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 +E+ PV ++A LG A AQ+H YI+++ +GL++VD HAAHER+ +E+++ Sbjct: 426 MPTENGLPVTSADAGVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKNAH 485 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + + SQ +L P + + E E + L LG + R GP ++ +R IPA+L+ Sbjct: 486 DGIGLQSQPMLVPITLAVGEREADTAESEADTLAALGFEVTRAGPGSLHVRSIPALLAHA 545 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 LLRD++ ++ + + + + +L+TMAC+G++R+ R++ EMN LLR+ME Sbjct: 546 EPEGLLRDVLTDLREHGQSRRVATARDELLSTMACHGAVRANRRLTVPEMNALLRDMEIT 605 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ + L++I++ F R Sbjct: 606 ERSGQCNHGRPTWARFSLAEIDRWFLR 632 >gi|21231736|ref|NP_637653.1| DNA mismatch repair protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768138|ref|YP_242900.1| DNA mismatch repair protein [Xanthomonas campestris pv. campestris str. 8004] gi|188991275|ref|YP_001903285.1| DNA mismatch repair protein [Xanthomonas campestris pv. campestris str. B100] gi|25090745|sp|Q8P8E4|MUTL_XANCP RecName: Full=DNA mismatch repair protein mutL gi|81305885|sp|Q4UVP3|MUTL_XANC8 RecName: Full=DNA mismatch repair protein mutL gi|229486329|sp|B0RRZ8|MUTL_XANCB RecName: Full=DNA mismatch repair protein mutL gi|21113440|gb|AAM41577.1| DNA mismatch repair protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573470|gb|AAY48880.1| DNA mismatch repair protein [Xanthomonas campestris pv. campestris str. 8004] gi|167733035|emb|CAP51233.1| DNA mismatch repair protein MutL [Xanthomonas campestris pv. campestris] Length = 624 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 217/624 (34%), Positives = 340/624 (54%), Gaps = 32/624 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +INQIAAGE++ERP+ +KEL+EN+LDA ++RV+ + GG +I DNG Sbjct: 1 MAIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIDLEEGGVRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TL SR P G Sbjct: 61 GGIAPEELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLASRRPDAEHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + I G ++ V P A PGT VEVR+LFF +PAR FL++E+ E I + +R +A+A Sbjct: 121 SALQIEGGRLGEVMPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V S + + + + +GEDF A+ ++ + L G+ Sbjct: 181 RPDVELRVSHNGKPSRRYKPGDLYSDAR--LGETLGEDFARQALRVDHSGAGLRLHGWVA 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R + +Q Y+++NGR+V+D+ + ++ AY + + GR P VL LE+DP +VDVN Sbjct: 239 QPHYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN--------- 349 VHPAK +RFR +I +F+ +++Q A+ + ++ Sbjct: 299 VHPAKHEVRFREARLIHDFVYRTLQDALAQTRAGALPADVGVGGAAALGIGAVAAQGGGS 358 Query: 350 --------APKTHLPKYATSLTNTQEKLFLQENRLST-----------NDLLPSDDPTYS 390 P S +Q L L+ + + L P S Sbjct: 359 YVADAGAGHPGAGSGSGYASWAPSQAPLGLRVDEARAAYAALYAPAAGSALRDDGQPVLS 418 Query: 391 EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 P ++ LG A AQ+H YI+++ +GL++VD HAAHER+ +E+++Q +S Sbjct: 419 GTGLPATAHDSGVPPLGYAVAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKQAHDSI 478 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 + +Q LL P + + E E + L LG + R GP ++ +R IPA+L+ + Sbjct: 479 GLHAQPLLVPMTLAVGEREADTAEREADTLASLGFEITRSGPQSLHVRSIPALLANADPE 538 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 LLRD++ ++ + + + + +L+TMAC+G++R+ R++ EMN LLR+ME S Sbjct: 539 ALLRDVLGDLREHGQSRRIATARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATERS 598 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+ + L +I++ F R Sbjct: 599 GQCNHGRPTWARFTLGEIDRWFLR 622 >gi|90422900|ref|YP_531270.1| DNA mismatch repair protein [Rhodopseudomonas palustris BisB18] gi|123275477|sp|Q219I5|MUTL_RHOPB RecName: Full=DNA mismatch repair protein mutL gi|90104914|gb|ABD86951.1| DNA mismatch repair protein MutL [Rhodopseudomonas palustris BisB18] Length = 599 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 238/598 (39%), Positives = 367/598 (61%), Gaps = 4/598 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E ++N+IAAGE++ERP+ +KEL+EN++DA +SR++ GGG+ ITD+G Sbjct: 1 MPVRQLPETVVNRIAAGEVVERPASVVKELVENAIDAGASRIDIFTDGGGRRRIGITDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT ++ +AV RH TSK+ D D I T GFRGEALPSIG+V+ L++ +R Sbjct: 61 AGMTHADLTLAVDRHATSKLDDEDLLAIRTLGFRGEALPSIGSVAKLSITTRHAAEPHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A+ G S + P A++ GT VEV DLF+ PARL FLK+++ E I +V+RR+A+A Sbjct: 121 ALAVEGGAKSPIVPAALSHGTRVEVSDLFYATPARLKFLKTDRTEAEAIREVVRRLAMAR 180 Query: 180 PKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P ++F+ + + R+ ++G DF +NA+E+ + + + ++G+ Sbjct: 181 PDIAFSMAGEERAPVTWAAALPGAAGRLTRLGDILGGDFRSNAIEVRSERDGVVVEGFAA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P+ R NA Y+F+NGR V+DK I+ +R AY++ +P R+PVV L + +D R+VD N Sbjct: 241 APSLTRANALGQYLFVNGRPVRDKLIIGAVRAAYSDYLPRDRHPVVALFVSLDSREVDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK+ +RFR+ ++R I+ ++++ + ++G T++ + ISSF AP+ + Sbjct: 301 VHPAKTEVRFRDAGLVRALIVHALKEGLAREGKRTAANDAGATISSFRPSFAPRANWDWR 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDP--TYSEDNDPVEESEATHYQLGIACAQIHQN 416 ++ D ++ ++ T LG A QIHQ Sbjct: 361 SSPSYPVAGSAAFDAAAGFAEREQSGFDVGAPSADVRSYQPSADFTDRPLGAARTQIHQT 420 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 YI++QT DGLV+VDQHAAHERL++EK++ + + Q LL PEI++L E ++ Sbjct: 421 YIVAQTRDGLVVVDQHAAHERLVYEKLKASLATNGVQRQILLIPEIVELDEATVERLVAR 480 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E+L G+ E FGP A+A+RE P++L K + LLRD+ + + + L+ R+ ++ Sbjct: 481 GEELATFGLVVESFGPGAVAVRETPSLLGKTDAGALLRDLAEHMAEWDEALPLERRLLHV 540 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ATMAC+GS+R+GR ++ EMN LLREME PNS QCNHGRPT+++LKLSDIEKLFGR Sbjct: 541 AATMACHGSVRAGRVLKPEEMNALLREMEDTPNSGQCNHGRPTYVELKLSDIEKLFGR 598 >gi|163758427|ref|ZP_02165515.1| putative DNA mismatch repair protein [Hoeflea phototrophica DFL-43] gi|162284716|gb|EDQ34999.1| putative DNA mismatch repair protein [Hoeflea phototrophica DFL-43] Length = 620 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 283/621 (45%), Positives = 395/621 (63%), Gaps = 29/621 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+I +L E +INQIAAGE+IERP+ +KEL+EN++DA +SRVE AGGGK+ ++ D+G Sbjct: 1 MRIHQLPETLINQIAAGEVIERPASVVKELVENAIDAGASRVEIATAGGGKALIRVIDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM +E++ +AV+RHCTSKI +I T GFRGEALPSIG+V+ LTL SRP + Sbjct: 61 RGMDAEDLQLAVRRHCTSKIDQRLDDIRTLGFRGEALPSIGSVARLTLRSRPADAAHANE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I+++G S ++P A N GT VEVRDLFF PARL FLKS++ ET IT+V+RR+AIA+P Sbjct: 121 ISLAGGVPSPLKPAAANKGTTVEVRDLFFATPARLKFLKSDRAETAAITEVVRRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V FT S +R ++ +T + RI QV+G +F N + L+ EI L G+ G+P Sbjct: 181 SVRFTLS--GPDRSTLDLAATGEDRLARIGQVLGAEFAANTIALDAMREEIELTGHIGLP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T+N+ N+ Y F+NGR VQDK ILS IR AY++T+P GRYPV VL + +DP VDVNVH Sbjct: 239 TWNKANSLSQYAFVNGRPVQDKQILSAIRAAYSDTLPRGRYPVAVLWITLDPALVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH--------QDNAPK 352 PAK+ +RFR+P ++R ++ +I++A+ G S ++ +F Q Sbjct: 299 PAKADVRFRDPGLVRGLLVGAIRQALLAGGDQASPSARADLVRAFSSTSPAGSDQSLPGS 358 Query: 353 THLP------------------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 + +P ++A + + + + S D Sbjct: 359 SSMPPAFHRDGNSAGLAGGWTGQWAAAQSPSWPLDGAAPGFGEASQAEFEAAAAPSGRFD 418 Query: 395 PVEESEATHYQL-GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 E+E G A AQ+H+NYI+SQT+DG+VIVDQHAAHERL+FE+++ + Sbjct: 419 KAPETEPDARHPLGAARAQVHENYILSQTSDGMVIVDQHAAHERLVFERLKTALREGSVA 478 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 SQ LL PEIIDL E +C + E +L G+ ERFGP AIA+RE PA+L + ++ L+ Sbjct: 479 SQILLLPEIIDLPEDDCDRLAERAGELAGFGLVLERFGPGAIAVRETPAMLGETDVTGLV 538 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 RD+ DEI + +T LQ+R+E + +TMAC+GS+RSGR++ EM+ LLREME+ P S QC Sbjct: 539 RDLADEITEWDSTGGLQERLEAVASTMACHGSVRSGRRLTREEMDALLREMERTPGSGQC 598 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 NHGRPT+I+LKLSDIEKLF R Sbjct: 599 NHGRPTYIELKLSDIEKLFSR 619 >gi|88704498|ref|ZP_01102212.1| DNA mismatch repair protein mutL [Congregibacter litoralis KT71] gi|88701549|gb|EAQ98654.1| DNA mismatch repair protein mutL [Congregibacter litoralis KT71] Length = 629 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 214/627 (34%), Positives = 349/627 (55%), Gaps = 33/627 (5%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I++L ++ NQIAAGE++ERP+ +KEL+ENSLDA + RV+ I G +I D+ Sbjct: 1 MPLIKRLPPRLANQIAAGEVVERPASVVKELLENSLDAGARRVDLDIEAAGTKLIRIRDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ S+++P+A+ RH TSKI DD + +FGFRGEAL SIG+VSHL + S + + Sbjct: 61 GSGIASDDLPLALDRHATSKIESLDDLEQVGSFGFRGEALASIGSVSHLVVTSNTAEAGS 120 Query: 118 -GAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 G + SG + +P A GT VEVRDLFF PAR FL++E+ E N + DV++R+ Sbjct: 121 DGQAASCSGRDMEVTLKPAAHPRGTTVEVRDLFFNTPARRKFLRTERTEFNHLDDVVKRI 180 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A++ VSF + + R++ + G F+ NAV ++ + ++ L G Sbjct: 181 ALSRFDVSFALRHNGRQLRDLRRCDNEADQLRRVASLCGPAFVENAVAIDRNAGDLRLHG 240 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 + P+F+R A+ + ++NGR ++DK ++ +R A+++ + GR+P VL LE+DP +V Sbjct: 241 WVAQPSFSRSQADLQHFYVNGRYIRDKLVVHAVRQAFSDVLYQGRHPAFVLYLELDPAEV 300 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH--------- 346 DVNVHP K +RFR+ + +FI ++ KA+ S S+V ++ +S Sbjct: 301 DVNVHPTKHEVRFRDGRSVHSFIYSTLHKALADIRPSDSAVPTQASMSPVSASTGRLDLL 360 Query: 347 ------------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 ++ + ++ Q R + + +Y + Sbjct: 361 TGELVRQQEMGLREQGAGRLTAANPGVFADRGDRGDFQGGRGAPAGFDDATAASYRQLYA 420 Query: 395 PVEES-------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 ++ A LG A AQ+H YI++Q +G+V+VD HAAHER+ +E+++Q Sbjct: 421 SPDKPGSVEEGDGADIPPLGYALAQLHGIYILAQNREGMVLVDTHAAHERITYERLKQAR 480 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + I SQ LL P+ + + E L+ EH LG++ + G ++ IREIP L Sbjct: 481 DEQGIRSQPLLVPQSVSVSSREAILVEEHAALFESLGLRVDVAGEESLLIREIPVSLQGA 540 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 ++ QLLRD++ ++++ ++ + + +L+TMAC+GS+R+ R++ EMN LLR+ME Sbjct: 541 DVEQLLRDVLADLLEYGSSERIARHEDELLSTMACHGSVRANRRLTVPEMNALLRDMEVT 600 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ L + D+++LF R Sbjct: 601 ERSGQCNHGRPTWTALSVQDLDRLFLR 627 >gi|325292085|ref|YP_004277949.1| DNA mismatch repair protein [Agrobacterium sp. H13-3] gi|325059938|gb|ADY63629.1| DNA mismatch repair protein [Agrobacterium sp. H13-3] Length = 609 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 300/607 (49%), Positives = 411/607 (67%), Gaps = 15/607 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++LSE +INQIAAGE+IERPS A KEL+EN++DA ++R+E AGGGK +ITDNG Sbjct: 4 MAIKQLSETLINQIAAGEVIERPSSATKELVENAIDAGATRIEIATAGGGKGLVRITDNG 63 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM+ ++ +AV+RHCTSKIS +I T GFRGEALPSIG+V+ L++ SR G+ Sbjct: 64 SGMSPADLELAVRRHCTSKISTTLDDIRTLGFRGEALPSIGSVAKLSITSRQHGAEQGSV 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I+++G K+S VRP A N GTIVEVRDLFF PARL FLK+E+ E IT+V++RMAIA+P Sbjct: 124 ISVTGGKVSEVRPAAANAGTIVEVRDLFFATPARLKFLKTERAEAAAITEVVKRMAIAFP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F S ++R + ST + R++Q++G +F +NA+E++ ++TL G+ G+P Sbjct: 184 HIRFVLS--GTDRSTLEIPSTGDDHLARMAQILGAEFKDNAIEIDAGREDVTLSGFAGVP 241 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGN+ YVF+NGR VQDK +LS IR AYAET+P GRYPV VL L +DP VDVNVH Sbjct: 242 TFNRGNSAHQYVFVNGRPVQDKLLLSAIRGAYAETVPHGRYPVAVLSLTLDPAFVDVNVH 301 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAKS +RFR+P ++R I+ +I++A+ + G ++ + +M+++F +P P A Sbjct: 302 PAKSDVRFRDPGLVRGLIVGAIRQALTRDGDRAATTGASQMMNAFRPGYSPSNLRPSAAA 361 Query: 361 ----------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES---EATHYQLG 407 L + F + + +D+ + S E + Y LG Sbjct: 362 TWSAAASPSRPLAVSGNMQFAEAVQSRFSDITMPTARAEPREVYEASASPSLEPSQYPLG 421 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 A AQ+HQNYI++QT DGLVIVDQHAAHERL+FE+MR +S + SQ LL PEIIDL E Sbjct: 422 AARAQLHQNYIVAQTEDGLVIVDQHAAHERLVFEEMRNALHSRRPPSQVLLIPEIIDLPE 481 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 +C +M+H LG+ ERFGP A+A+RE PA+L + N+ L+R + DEI + Sbjct: 482 EDCDRLMDHAAGFDALGLVIERFGPGAVAVRETPAMLGEVNVQGLVRQLADEIAEWDAAS 541 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 TL +++E + ATMAC+GS+RSGR+M+ EMN LLR+ME P S QCNHGRPT+I+LKLSD Sbjct: 542 TLANKLEYVAATMACHGSVRSGRRMRPEEMNALLRQMENTPGSGQCNHGRPTYIELKLSD 601 Query: 588 IEKLFGR 594 IE+LFGR Sbjct: 602 IERLFGR 608 >gi|49475080|ref|YP_033121.1| DNA mismatch repair protein [Bartonella henselae str. Houston-1] gi|81827745|sp|Q6G4R4|MUTL_BARHE RecName: Full=DNA mismatch repair protein mutL gi|49237885|emb|CAF27081.1| DNA mismatch repair protein mutL [Bartonella henselae str. Houston-1] Length = 612 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 272/612 (44%), Positives = 396/612 (64%), Gaps = 19/612 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ +KEL+EN++DAE++R+E V GGK+F +++DNG Sbjct: 1 MIIRHLSENIINQIAAGEVIERPANVVKELVENAIDAEATRIEIVTTNGGKNFIRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++++ +AV RHCTSKI+DD NI GFRGEALPSIG+V+ L L SR + A+ Sbjct: 61 CGIPADQLTLAVSRHCTSKITDDVHNICFLGFRGEALPSIGSVAKLKLTSRTQNAESAAE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ KI +P A NPGTIVEVRDLFF PARL F+K+++ ETN ITD+I+R+AIA+P Sbjct: 121 IIVTAGKIVGPKPAAANPGTIVEVRDLFFVTPARLKFMKTDRAETNSITDMIKRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ S ++ + N +RI+Q++G++F N++ LN + + L G+ + Sbjct: 181 HIHFSLSGSDRTSLELPATANNTQGQLQRITQIMGKEFAPNSIVLNAERESVRLTGFACL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNR N+ + ++NGR V+DKF+ IR AYA+ + RYPV +L +++ P VDVNV Sbjct: 241 PSFNRSNSLHQFAYVNGRPVRDKFLWGAIRGAYADVMTRDRYPVSILFIDLPPADVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ +RFR+P IR I+ +I++A++ G+ ++S S+ M+++F KT Y Sbjct: 301 HPTKADVRFRDPGFIRGLIVGAIREALHHTGVRSTSTRSEAMLAAFQTQKPLKTFKSTYK 360 Query: 360 TSLTNTQE-----------------KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 S + Q + L+E+ + L N P SE Sbjct: 361 PSSYSPQPYHVESASMVNKPLDIISPVGLKEDAPPLMEGLDIPSGDAYTPNTPAA-SEEC 419 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 Y LG A AQIH+NYII+QT D L+IVDQHAAHERL++E ++ S + SQ LL PEI Sbjct: 420 SYPLGAARAQIHKNYIIAQTQDSLIIVDQHAAHERLVYEALKNALYSKPLPSQLLLIPEI 479 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 ++L E + ++ H + L + G+ E FGP AI +RE P++L + N+ L++D+ DE + Sbjct: 480 VELSEEDATCLLTHKDALQKFGLGIEAFGPGAIVVRETPSLLGEINVEALIKDLADEAAE 539 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 TT L+ ++ + ATMAC+GSIRSGR + EMN LLR++E PN+ CNHGRPT+I+ Sbjct: 540 YDTTDNLKTMLDYVAATMACHGSIRSGRLLHPEEMNALLRQIEATPNTGTCNHGRPTYIE 599 Query: 583 LKLSDIEKLFGR 594 LKL+DIE+LFGR Sbjct: 600 LKLADIERLFGR 611 >gi|110835066|ref|YP_693925.1| DNA mismatch repair protein [Alcanivorax borkumensis SK2] gi|110648177|emb|CAL17653.1| DNA mismatch repair protein MutL [Alcanivorax borkumensis SK2] Length = 622 Score = 555 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 200/618 (32%), Positives = 333/618 (53%), Gaps = 25/618 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L ++ NQIAAGE++ERP+ +KEL+EN+LDA S + + GG ++ DNG Sbjct: 3 KIQLLDSRLANQIAAGEVVERPASVLKELLENALDAGSESISVDVEQGGVKLLRVRDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+A+ RH TSKI DD I T GFRGEAL +I +VS L+L S G Sbjct: 63 GIERDDLPLALSRHATSKIRGLDDLEAIGTLGFRGEALAAISSVSRLSLASNVEGEPEGW 122 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ + G ++ P GT V +RDLFF PAR FL++E+ E N + +V RR+A++ Sbjct: 123 QVTVEGRDMAPSVSPAGHPRGTTVTMRDLFFNTPARRRFLRTEKTEFNHLEEVFRRIALS 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +F + + +++ + R++++ G+ FI AV ++ + + + L G+ G Sbjct: 183 EFNTAFRLTHNQKVIHQLPAGLDDTLRAARVAKLCGKGFIEQAVPVDVERDGLRLHGWMG 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y ++NGR ++DK + +R AY++ + GR+P VL LE+DP VDVN Sbjct: 243 LPTFSRSQADLQYFYVNGRVIRDKVVSHAVRQAYSDVLYHGRHPAYVLFLELDPAMVDVN 302 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINK--------------------KGISTSSVLS 338 VHP K +RFR ++ F+ S+ + I + + Sbjct: 303 VHPTKHEVRFREQRMVHGFLYSSLHRVIAGVRPGQELAGSVADEGGPAAGMDAAMAPSQG 362 Query: 339 KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 ++S +H P A T + Q R + + Sbjct: 363 NMSLTSPTGSGGSLSHPPGQAYPSTGGGVFGYGQGARQADAYGALVRGHVGESAPAVMPP 422 Query: 399 SEATHYQL--GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 + G A AQ+H +I+++ G+V+VD HAAHER+ +E+++Q + K+ SQ Sbjct: 423 ANENETVPPLGYAVAQLHGIFILAENEQGMVVVDMHAAHERITYERLKQSWAEDKVRSQP 482 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 LL P + + E + E RLG +R GP + +RE+PA+L + ++RD+ Sbjct: 483 LLVPVSLAVSSREADFAEQQPEVFSRLGFVVQRAGPETLVVREVPALLRNGDSESMVRDV 542 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 + +++ ++ + +++ +L+TMAC+GS+R+ R++ EMN LLR+ME S QCNHG Sbjct: 543 LSDLLAEGSSERIAQKLDELLSTMACHGSVRANRRLTIAEMNALLRDMEATERSGQCNHG 602 Query: 577 RPTFIKLKLSDIEKLFGR 594 RPT+ ++ + D+++LF R Sbjct: 603 RPTWTQMSIKDLDRLFMR 620 >gi|91978493|ref|YP_571152.1| DNA mismatch repair protein [Rhodopseudomonas palustris BisB5] gi|123166645|sp|Q131I8|MUTL_RHOPS RecName: Full=DNA mismatch repair protein mutL gi|91684949|gb|ABE41251.1| DNA mismatch repair protein MutL [Rhodopseudomonas palustris BisB5] Length = 597 Score = 555 bits (1429), Expect = e-155, Method: Composition-based stats. Identities = 235/596 (39%), Positives = 361/596 (60%), Gaps = 2/596 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E I+N+IAAGE++ERP+ +KEL+EN++DA + RV+ GGG+ I D+G Sbjct: 1 MPVRQLPETIVNRIAAGEVVERPASVVKELVENAIDAGACRVDVFSDGGGRRKIVIADDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT ++ +AV RH TSK+ D D I T GFRGEALPSIGAV+ L+L +R Sbjct: 61 GGMTQADLALAVDRHATSKLDDEDLLAIRTLGFRGEALPSIGAVARLSLTTRHAAEPHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G S + P A++ GT VEV DLFF PARL FLK+++ E I +V+RR+A+A Sbjct: 121 TLSVEGGAKSPISPAALSQGTRVEVADLFFATPARLKFLKTDRTEAEAIREVVRRLAMAR 180 Query: 180 PKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P ++FT + + R+ ++G DF NA+E+ + + ++G+ Sbjct: 181 PDIAFTLAGEERAPVTWAAALPGAPGRLTRLGDILGADFRANAIEVGSEREGVAVEGFAA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P+ R NA Y+F+NGR V+DK IL +R AYA+ +P R+PVV L + +D R+VD N Sbjct: 241 SPSLTRANALGQYLFVNGRPVRDKLILGAVRAAYADYLPRDRHPVVALFVTLDSREVDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK+ +RFRN ++R I+ ++++ + ++G T++ + IS+F + P + Sbjct: 301 VHPAKTEVRFRNAGLVRALIVHALKEGLAREGRRTAANSAGAAISNFRPASMPPGNWDWR 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 ++ + ++ E LG A QIH+ YI Sbjct: 361 SSPSYPVGGGSSAAPSFGERPQAAFDVGGPSADIRPHEAAPELLDRPLGAARTQIHETYI 420 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +SQT DGL++VDQHAAHER+++E+++ ++ + Q LL P+I+++ E ++ E Sbjct: 421 VSQTRDGLIVVDQHAAHERIVYERLKASLDANGVQRQILLIPDIVEMDEATVERLVARAE 480 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +L + G+ E FGP A+A+RE P++L K N LLRD+ + + + L+ R+ ++ A Sbjct: 481 ELSKFGLVVESFGPGAVAVRETPSLLGKVNAASLLRDLAEHMAEWDEALPLERRLMHVAA 540 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 TMAC+GS+R+GR ++ EMN LLREME PNS QCNHGRPT+++L L+DIEKLFGR Sbjct: 541 TMACHGSVRAGRVLKPEEMNALLREMEATPNSGQCNHGRPTYVELTLADIEKLFGR 596 >gi|126736240|ref|ZP_01751983.1| DNA mismatch repair protein [Roseobacter sp. CCS2] gi|126714406|gb|EBA11274.1| DNA mismatch repair protein [Roseobacter sp. CCS2] Length = 603 Score = 555 bits (1429), Expect = e-155, Method: Composition-based stats. Identities = 256/599 (42%), Positives = 380/599 (63%), Gaps = 17/599 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+ENS+DA ++R+E VIA GGK+ ++TD+G G Sbjct: 14 IRQLDDAAINRIAAGEVLERPASAVKELVENSIDAGATRIEVVIADGGKTLIRVTDDGCG 73 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT ++PMA+ RH TSKI D NI +FGFRGEALPS+GA L + SR A I Sbjct: 74 MTPSDLPMAMLRHATSKIDGSDLLNIQSFGFRGEALPSLGATGRLKITSRAKNAE-AAMI 132 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 A++G + V+P A++ GT++E+RD+F+ PARL FL++++ E +TDV++R+A+A P Sbjct: 133 AVAGGQAEGVKPAALSAGTVIELRDMFYATPARLKFLRTDRAEAQAVTDVVKRLAMAEPF 192 Query: 182 VSFTFSTI--KSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQG 235 V+F NR + G+ + R+ V+G+DF NA+ ++ + L G Sbjct: 193 VTFILRDASKGDNRTVFRADAETGDLFDALHGRLRAVLGKDFAENALRIDTEREGFHLTG 252 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y +PT++RG A ++F+NGR V+DK +L +R AY + + R+PV L ++ DP V Sbjct: 253 YAALPTYSRGAAVAQFLFVNGRPVRDKMLLGALRAAYMDVLSRDRHPVAALFVDCDPTLV 312 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHPAKS +RFR+P +R I+ ++ A+ G S+ ++ + + Sbjct: 313 DVNVHPAKSEVRFRDPGTVRGLIVSGLRHALADAGHRASTTVANATLGAI---------T 363 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 P+ ++ ++ P S +P+ E + LG A AQ+H+ Sbjct: 364 PERTEPRVYQMDRPSFSARSMTFQAQAPGFGEMPSARFEPMVEDDPDDLPLGAARAQVHE 423 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 NYII+QT +G+VIVDQHAAHERL++EK++ + +Q LL PEI++L E E A + + Sbjct: 424 NYIIAQTENGIVIVDQHAAHERLVYEKLKAQMAENGVAAQALLIPEIVELSENEAAQLRD 483 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 +DL + G+ E FG AIA+RE PAIL + N ++RDI+DE+ D + ++Q RIE Sbjct: 484 IADDLAKFGLTIEPFGGGAIAVRETPAILGEVNAEAMIRDILDELADQGDSASVQARIEA 543 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 IL+ +AC+GSIRSGR+MQ+ EMN LLREME P S QCNHGRPT+++LKL+DIE+LFGR Sbjct: 544 ILSRVACHGSIRSGRRMQAAEMNALLREMEATPLSGQCNHGRPTYVELKLADIERLFGR 602 >gi|254486044|ref|ZP_05099249.1| DNA mismatch repair protein MutL [Roseobacter sp. GAI101] gi|214042913|gb|EEB83551.1| DNA mismatch repair protein MutL [Roseobacter sp. GAI101] Length = 613 Score = 555 bits (1429), Expect = e-155, Method: Composition-based stats. Identities = 255/600 (42%), Positives = 378/600 (63%), Gaps = 10/600 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA + ++ A GGK+ ++TD+G G Sbjct: 15 IRQLDDSAINRIAAGEVVERPASAVKELVENAIDAGARQITVEYADGGKTLIRVTDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + ++P+A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR + GA+I Sbjct: 75 IPAVDLPLALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLTITSRVAGQD-GAEI 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++G + VRP A+N GT+V +RDLFF PARL FL++++ E I D+I+R+A+A P Sbjct: 134 TVNGGQTGPVRPAALNGGTVVTLRDLFFATPARLKFLRTDRAEAQAIADIIKRLAMAEPF 193 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGN----FPERISQVIGEDFINNAVELNEKSNEITLQ 234 V FT S R ++ G+ R++QV+G +F +N++ ++ + + L Sbjct: 194 VRFTLRDVSGDGQGRDVFRAEAEQGDMFAALHGRLAQVLGREFADNSLPIDAEREGLHLT 253 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G+ +PT++RG A Y+F+NGR V+DK ++ +R AY + + R+P L L+ P Sbjct: 254 GFAALPTYSRGTAVAQYLFVNGRPVRDKLLVGALRGAYFDLLSRDRHPAAALFLDCAPTL 313 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAKS +RFR+P + R I+ ++ A+ G S+ ++ + + + Sbjct: 314 VDVNVHPAKSEVRFRDPGLARGLIVSGLRHALADAGHRASTTVADATLGAMRPEQTGARV 373 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 SL Q + + T + E E Y LG A Q+H Sbjct: 374 YQMDRPSLGARTAAYQAQSPGFAETAGMWGRVETPAAPVTE-EPQETPDYPLGTARGQVH 432 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +NYII+QT G+VIVDQHAAHERL++EK+++ + +Q LL PEI+DL +CA ++ Sbjct: 433 ENYIIAQTATGMVIVDQHAAHERLVYEKLKRQMAENGVAAQALLIPEIVDLSASDCARLL 492 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 + ++L RLG+ E FG +AIA+RE PAIL N ++ D++DE+ D + + T+Q RIE Sbjct: 493 DVADELTRLGLTIEAFGGSAIAVRETPAILGTVNAKAMILDVLDELADQNESNTVQARIE 552 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 IL+ +AC+GSIRSGR M+ EMN LLREME P+S QCNHGRPT+++LKLSDIE+LFGR Sbjct: 553 AILSRVACHGSIRSGRWMRGEEMNALLREMEATPHSGQCNHGRPTYVELKLSDIERLFGR 612 >gi|319408063|emb|CBI81717.1| DNA mismatch repair protein MutL [Bartonella schoenbuchensis R1] Length = 615 Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats. Identities = 267/614 (43%), Positives = 391/614 (63%), Gaps = 20/614 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ +KEL+EN++DA ++R+E V A GGK+ +++DNG Sbjct: 1 MIIRHLSETIINQIAAGEVIERPANVVKELVENAIDAGATRIEIVTANGGKNLIRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ +++ +A+ RHCTSK+ DD NI GFRGEALPSIG+V+ L L+SR ++ A+ Sbjct: 61 CGIPKDQLTLAISRHCTSKLVDDVHNICFLGFRGEALPSIGSVAKLKLVSRTQDADSAAE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ KI +P A N GT VEVRDLFF PARL F+K++ E N ITD+I+R+AIA+P Sbjct: 121 IIVTAGKIEGPKPAAANSGTTVEVRDLFFVTPARLKFMKTDSAEMNAITDMIKRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ S ++ N ERI+Q++G++F +N + LN + L G+ + Sbjct: 181 HIRFSLSGKDRTLIELPATENNTQGQLERITQIMGKEFGSNTITLNAERETARLTGFACL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNRGN+ +V++NGR V+DKF+ IR AY + + R+ V +L +++ P VDVNV Sbjct: 241 PSFNRGNSLHQFVYVNGRPVRDKFLSGAIRGAYTDVMAPNRHAVSILFIDLPPADVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT-HLPKY 358 HPAK+ +RFR+P +IR II +I +A+ + GI SS SK M+++F + ++ KT P Sbjct: 301 HPAKADVRFRDPGLIRGLIIGAIHEALRQTGIRPSSTGSKAMLAAFQRQSSFKTFRSPSP 360 Query: 359 ATSLTNTQEKLFLQENRLS------------------TNDLLPSDDPTYSEDNDPVEESE 400 + + + ++ S T + + P+ SE Sbjct: 361 HQPFSYSPQPQYVAPGTTSADHKPVDIPDFSGLREDITPMIEYVNTPSSDVGFVNTSTSE 420 Query: 401 ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 +Y LG A AQIH+NYI++QT + L+IVDQHAAHERL++E ++ S + SQ LL P Sbjct: 421 ELYYPLGAAKAQIHKNYIVAQTKNSLIIVDQHAAHERLVYEALKNALYSKPLPSQLLLIP 480 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 EI++L E + A ++ H + L + G+ E FG AI +RE P +L + N L++D++DE Sbjct: 481 EIVELSEEDAACLLVHKDVLQKFGLGIEAFGSGAIVVRETPTMLGEINAQALIKDLVDEA 540 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + TT L+ + ++ ATMAC+ SIRSGR + EMN LLR+ME PNSS CNHGRPT+ Sbjct: 541 SEYDTTDNLKAMLNHVAATMACHSSIRSGRLLHPKEMNALLRQMEATPNSSTCNHGRPTY 600 Query: 581 IKLKLSDIEKLFGR 594 I+LKL+DIE+LFGR Sbjct: 601 IELKLADIERLFGR 614 >gi|126463518|ref|YP_001044632.1| DNA mismatch repair protein [Rhodobacter sphaeroides ATCC 17029] gi|126105182|gb|ABN77860.1| DNA mismatch repair protein MutL [Rhodobacter sphaeroides ATCC 17029] Length = 616 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 257/602 (42%), Positives = 380/602 (63%), Gaps = 11/602 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E IN+IAAGE++ERP+ A+KEL+EN+LDA + R+ IA GGK+ ++TD+G G Sbjct: 15 IRQLDEAAINRIAAGEVVERPASAVKELVENALDAGARRIAVDIACGGKTLIRVTDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT+E++P+A+ RH TSKI D +I +FGFRGEALPS+ AV LT+ SR + GAQI Sbjct: 75 MTAEDLPLALSRHATSKIDGSDLLDIRSFGFRGEALPSLAAVGRLTITSRVTEGE-GAQI 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 A+S +I VRP A+ GT+VE+RDLFF PARL FL++++ ET I +V+RR+A+A P+ Sbjct: 134 AVSAGRIEPVRPAALGAGTVVELRDLFFATPARLKFLRTDRAETQAIAEVVRRLALAEPE 193 Query: 182 VSFTFSTI--KSNRYKMNFQSTNGNF----PERISQVIGEDFINNAVELNEKSNEITLQG 235 V FT + R ++ G+ R+++V+G +F NA+ ++ + LQG Sbjct: 194 VGFTLTYHSAGEPRLLFRAEAEGGDLFDALHRRVARVVGAEFAENALRIDVAREGLRLQG 253 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y +PT++RG+ ++F+NGR V D+ +L +R Y + + RYP VL L DP++V Sbjct: 254 YAALPTYSRGSGVAQFLFVNGRPVLDRMLLGALRAGYMDVLSRDRYPAAVLNLICDPQRV 313 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHPAK+ +RFR +R I+ ++++A+ G S+ ++ + + +F + Sbjct: 314 DVNVHPAKAEVRFREAGEVRGLIVTALRQALAGAGHRASTTVAGETLEAFRPEMPAAASP 373 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE---SEATHYQLGIACAQ 412 + + P+ VE EA LG A AQ Sbjct: 374 APATRIYQMDRPSAAAVARSFAFQAPEPAMPGLAEAPAARVEAPVAEEAHDRPLGAARAQ 433 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 IH N+I++QT GLVIVDQHAAHERL++EK+++ + T I Q LL PEI++L + A Sbjct: 434 IHGNWILAQTASGLVIVDQHAAHERLVYEKLKRQRDETGIARQALLIPEIVELSPTDAAR 493 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 ++E ++L G+ E FG A+A+RE+PAIL K LLRDI+D++ D ++ LQ R Sbjct: 494 LLEAADELASAGLVIEPFGGGAVAVREVPAILGKVEAAPLLRDILDDLADLGSSDRLQAR 553 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 ++ +L+ MAC+GS+RSGR +++ EMN LLREME P S QCNHGRPT+++LKL+DIE+LF Sbjct: 554 MDAVLSRMACHGSVRSGRALRAEEMNALLREMEATPLSGQCNHGRPTYVELKLADIERLF 613 Query: 593 GR 594 GR Sbjct: 614 GR 615 >gi|190575209|ref|YP_001973054.1| DNA mismatch repair protein [Stenotrophomonas maltophilia K279a] gi|190013131|emb|CAQ46763.1| putative DNA mismatch repair protein [Stenotrophomonas maltophilia K279a] Length = 634 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 216/627 (34%), Positives = 339/627 (54%), Gaps = 36/627 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L E +INQIAAGE++ERP+ +KEL+EN++DA +SRV+ + GG +I DNG Sbjct: 8 PIRPLPEILINQIAAGEVVERPASVVKELVENAIDAGASRVDIDLEEGGVRLIRIRDNGS 67 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+AV RH TSKI+D D ++ T GFRGEALPSI +VS TL SR + G+ Sbjct: 68 GIAPEQLPLAVSRHATSKIADLDDLESVATLGFRGEALPSIASVSRFTLSSRRAHDEHGS 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G KI V P A PGT VEVR+LF+ +PAR FL++E+ E I + +R +A+A Sbjct: 128 ALQIEGGKIGEVTPRAHAPGTTVEVRELFYNVPARRKFLRAERTELGHIEEWLRSLALAR 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V S + + +++ +GEDF N AV ++ + L G+ Sbjct: 188 PDVELRVSHNGKASRRYKPGDLYSDAR--LAETLGEDFANQAVRVDHSGAGLRLHGWIAQ 245 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P ++R +A+Q Y+++NGR+V+D+ + ++ AY + + GR P VL LE+DP +VDVNV Sbjct: 246 PHYSRASADQQYLYVNGRSVRDRSVAHAVKMAYGDVLYHGRQPAYVLFLELDPTRVDVNV 305 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS---------------- 343 HPAK +RFR+ ++ +F+ ++++ A+ S+ Sbjct: 306 HPAKHEVRFRDSRLVHDFVYRTLKDALADTRAGMSAQEIGAGPVHPVDAAAAPMASSAGA 365 Query: 344 -----SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 + + S Q+ L LQ P +E + Sbjct: 366 SGFGLARGPAPGAGSGGGGGGFSGWRPQQPLGLQVADAPAAYAALYAAPAGAERGAALPP 425 Query: 399 SEATH-----------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 A + LG A AQ+H YI+++ +GL++VD HAAHER+ +E+++ Sbjct: 426 MPAENGLPVTSADAGVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKNAH 485 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + + SQ LL P + + E E E L LG + R GP ++ +R IPA+L+ Sbjct: 486 DGIGLQSQPLLVPITLAVGEREADTAESEAETLAALGFEVTRAGPGSLHVRSIPALLAHA 545 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 LLRD++ ++ + + + + +L+TMAC+G++R+ R++ EMN LLR+ME Sbjct: 546 EPEGLLRDVLTDLREHGQSRRVASARDELLSTMACHGAVRANRRLTVPEMNALLRDMEIT 605 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ + L++I++ F R Sbjct: 606 ERSGQCNHGRPTWARFSLAEIDRWFLR 632 >gi|302383491|ref|YP_003819314.1| DNA mismatch repair protein MutL [Brevundimonas subvibrioides ATCC 15264] gi|302194119|gb|ADL01691.1| DNA mismatch repair protein MutL [Brevundimonas subvibrioides ATCC 15264] Length = 617 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 236/616 (38%), Positives = 360/616 (58%), Gaps = 22/616 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L + +N+IAAGE++ERP+ AIKEL+EN+LDA ++R+E GGG S I D+G Sbjct: 1 MPIRRLPPETVNRIAAGEVVERPASAIKELVENALDAGATRIEVQADGGGLSRILIADDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD------FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ 114 GM +++ +AV+RH TSK+ D I T GFRGEALPSIG+V+ LT+ SR P Sbjct: 61 HGMAPDQLALAVERHATSKLEPDDAGDVDLLRISTLGFRGEALPSIGSVARLTITSRSPG 120 Query: 115 NNTGAQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR 173 + ++ + G VEVRDLF+ PARL F+KSE+ E I++ I+ Sbjct: 121 GDAHQITVEGGDQRPVAPAGFPGPHGARVEVRDLFYATPARLKFMKSERSEAMAISEEIK 180 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNF-QSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 R A+A+ V+FT ++ + +R++ ++G DF NA+ +++ I Sbjct: 181 RQAMAHEGVAFTLDLDGRTTLRLPAEHPGDEGRLKRLAALLGRDFEANALLIDQSREGIR 240 Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 L GY G+PT++RGN Y+F+NGR V+D+ + +R AYA+ + R+P VL LEIDP Sbjct: 241 LSGYAGLPTYSRGNGGHQYLFVNGRPVRDRLLQGALRGAYADFLARDRHPAAVLFLEIDP 300 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK 352 VDVNVHPAK+ +RFR+P ++R I+ +++ A++ G S+ ++ +++ F Sbjct: 301 LFVDVNVHPAKAEVRFRDPALVRGLIVGALRHALHAAGHRASTTVADSVLAGFTAHTGAA 360 Query: 353 THLPKYATS--------------LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 + + + R + + P + E + Sbjct: 361 FSPSSQTSQGFAGGFSGWTGWDRPVAANQDIPGLSERSARVEAPPPGFTGWPEQSGAANT 420 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 S+ LG A AQ+H YI++QT DGLV+VDQHAAHERL++E+M+ +T Q LL Sbjct: 421 SDPIDQPLGAARAQVHGTYIVAQTRDGLVVVDQHAAHERLVYERMKVQMAQGSVTRQALL 480 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 TPE+++L E ++ ++L LG+ E FG A+ +RE PA+L ++ L+RDI D Sbjct: 481 TPEVVELDPAEADRVLARADELAELGLIVEPFGGGAVLVRETPALLGDTDVQGLIRDIAD 540 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + L +R+ + TMAC+GS+R+GR + + EMN LLR+ME P+S QCNHGRP Sbjct: 541 DLAEHGAALALSERLGEVCGTMACHGSVRAGRVLSAPEMNALLRQMEATPHSGQCNHGRP 600 Query: 579 TFIKLKLSDIEKLFGR 594 T+++LKL D+EKLFGR Sbjct: 601 TYVELKLHDLEKLFGR 616 >gi|75676732|ref|YP_319153.1| DNA mismatch repair protein [Nitrobacter winogradskyi Nb-255] gi|123745646|sp|Q3SPJ0|MUTL_NITWN RecName: Full=DNA mismatch repair protein mutL gi|74421602|gb|ABA05801.1| DNA mismatch repair protein MutL [Nitrobacter winogradskyi Nb-255] Length = 603 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 230/602 (38%), Positives = 359/602 (59%), Gaps = 8/602 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E ++N+IAAGE++ERP+ +KEL+EN++DA ++R++ GGG+ +TD+G Sbjct: 1 MPVRQLPETVVNRIAAGEVVERPASVVKELVENAIDAGATRIDVFTDGGGRRRIGVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +AV RH TSK+ D D I T GFRGEALPSIGAV+ L + +R + Sbjct: 61 AGMAKGDLALAVDRHATSKLDDEDLLGIRTLGFRGEALPSIGAVARLCITTREAREPHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + S + P A+ GT VEV DLF+ PARL FLK+++ E I +V+RR+A+A Sbjct: 121 SLTVEGGRKSEIIPAALTNGTRVEVGDLFYATPARLKFLKTDRTEAEAIREVVRRLAMAR 180 Query: 180 PKVSFTFSTIKS-NRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P + FT + + R+ ++G DF A+ + + + ++G+ Sbjct: 181 PDIGFTLAGEERAPVTWTAALPGAAGRLTRLGDILGGDFRAAAIPVRAEREGVIVEGFAA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P+ R NA Y+F+NGR V+DK IL +R AY++ +P R+PV L + DPR+VD N Sbjct: 241 APSLTRANALGQYLFVNGRPVRDKLILGAVRAAYSDYLPRDRHPVAALFVTADPREVDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK+ +RFRN ++R I+ ++++ + ++G T++ ++++F +P+ + Sbjct: 301 VHPAKTEVRFRNAGLVRALIVHALKEGLAREGRRTAANRDGAVLTAFRPAPSPRPANWDW 360 Query: 359 ATSLTNTQEK------LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 S + + L P+ D + LG A Q Sbjct: 361 RESPAAPADARPWIGGPPAAAFAEAGQAALDVGAPSADVRFDAHPPLDLVDRPLGAARTQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 IH+ YI+SQT DGL++VDQHAAHER+++E+++ + Q LL P+I++L E Sbjct: 421 IHETYIVSQTRDGLIVVDQHAAHERIVYERLKTALARDGVQRQILLIPDIVELDEATVEK 480 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 +++ +L + G+ E FGP A+A+RE P++L K N LLRD+ + + + T L+ R Sbjct: 481 LIDRATELEKFGLAIESFGPGAVAVRETPSLLGKINAAALLRDLAEHMTEWEETLPLERR 540 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 + ++ ATMAC+GS+R+GR ++ EMN LLREME PNS QCNHGRPT+++LKL DIEKLF Sbjct: 541 LMHVAATMACHGSVRAGRILKPEEMNALLREMEATPNSGQCNHGRPTYVELKLDDIEKLF 600 Query: 593 GR 594 GR Sbjct: 601 GR 602 >gi|114331804|ref|YP_748026.1| DNA mismatch repair protein MutL [Nitrosomonas eutropha C91] gi|114308818|gb|ABI60061.1| DNA mismatch repair protein MutL [Nitrosomonas eutropha C91] Length = 608 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 215/610 (35%), Positives = 332/610 (54%), Gaps = 20/610 (3%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M+ I+ L + +I+QIAAGE+IERP+ +KEL+ENS+DA ++ + IA GG ++TDN Sbjct: 1 MRAIKLLPDGLISQIAAGEVIERPASVLKELLENSIDAGATEITVNIAQGGLKLIRVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +EE+P+A+ RH TSKI+ +D +I + GFRGE L SI +VS+L+L+S P Sbjct: 61 GSGIPAEELPLALTRHATSKIASQEDLHSITSLGFRGEGLASIASVSYLSLISHQPAGKH 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 +I G ++ S P + GT VEVRDLFF +PAR FLK+E E +V RRMA+ Sbjct: 121 AWEIRSEGTRLMSPEPSSHMAGTTVEVRDLFFNLPARRKFLKTEATEFAHCEEVFRRMAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++ ++FT + + ERI V+GE+F A ++E+S I LQG Sbjct: 181 SHADITFTLRHNGN----LRSHWQAAEAAERIGAVLGEEFSGAATWMDEQSAGIGLQGML 236 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P ++R + Y F+NGR ++DK I +R AY + + L R+ VL L IDP QVDV Sbjct: 237 ALPAYSRATRDMQYFFVNGRFIRDKLITHALREAYRDVLHLDRHAAFVLYLAIDPEQVDV 296 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISSFHQDNAPKTHL 355 NVHP K+ +RFR I FI + KA+ + G+++SS + + P Sbjct: 297 NVHPTKTEVRFREARAIHQFIYHGVSKALALPRSGVASSSPVGAVWPGAQDASVDPTRTG 356 Query: 356 PKYATSLTNTQEKLFLQENRLSTN-----------DLLPSDDPTYSEDNDPVEESEATHY 404 A N + L R++ + + + + Sbjct: 357 FTPAVPTLNYPRQARLPSERVAQPFNFYQVLTGGESGATAMQNQLRQTGEGESDENPAMP 416 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 LG A + YI++Q GLVIVD HAAHER+++E+++ + +++Q LL P Sbjct: 417 PLGFALGLLRGIYILAQNQKGLVIVDMHAAHERIVYEQLKTQLDQQVLSAQRLLIPVTFH 476 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + A + E+ L +L + + IR +P L + +L+R ++DEI + Sbjct: 477 ADSLDIATVEENQALLQQLCFEVSTLSATTLVIRTVPTTLQHADAEKLVRALLDEIRNGD 536 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 L R +LATMAC+G++R+ R++ IEMN LLR+ME S QCNHGRPT+ ++ Sbjct: 537 PAQLLAARRNELLATMACHGAVRANRQLTLIEMNELLRKMEVTERSDQCNHGRPTWFEIS 596 Query: 585 LSDIEKLFGR 594 L++++K+F R Sbjct: 597 LAELDKMFMR 606 >gi|309781394|ref|ZP_07676130.1| DNA mismatch repair protein MutL [Ralstonia sp. 5_7_47FAA] gi|308919807|gb|EFP65468.1| DNA mismatch repair protein MutL [Ralstonia sp. 5_7_47FAA] Length = 647 Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 201/631 (31%), Positives = 329/631 (52%), Gaps = 45/631 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ +KEL+EN+LDA +++++ + GG ITDNG Sbjct: 22 PIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQIQIKLEEGGVRRIAITDNGV 81 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++E+P+A+ RH TSKI ++ ++ T GFRGEAL SI +V+ LTL SR + Sbjct: 82 GIPADELPVALMRHATSKIGSLEELESVATLGFRGEALASIASVAELTLTSRTANDAHAT 141 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + +P + GT V+V+ L+F PAR FLK+EQ E +VIRR A+A Sbjct: 142 QI---IAQTGRAQPASGGVGTTVDVQHLYFNTPARRKFLKTEQTELGHCMEVIRRTALAR 198 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ + N + R + V+G +F + E + E+ L G+ G+ Sbjct: 199 PDVAISVHHNGKPLEHWNATQADS----RSAAVLGTEFARARLPFEESAGELRLFGFAGL 254 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RG A+ + ++NGR V+D+ + +R+AY + + R+P VL LE+ P VDVNV Sbjct: 255 PTASRGRADHQFFYVNGRFVRDRLLTHAVRSAYEDVLHGDRFPAYVLCLELPPEAVDVNV 314 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP+K +RFR+ + F+ ++Q+A+++ L + ++ P Sbjct: 315 HPSKIEVRFRDSRAVHQFVYHAVQRALSRHAGEQGDSLRTDIAAAPEVAGVTTAPSPADN 374 Query: 357 --KYATSLTNTQEKLFLQENRLST-----NDLLPSDDPTYSEDNDPVEESEATH------ 403 ++ + Q L + + R D P + D + Sbjct: 375 TTRWINQMAARQTSLGIAQPRAEYLSMMRGDSTPMPAMRPAWMTDVPSAATLFDGGTATA 434 Query: 404 --------------------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + LG A AQ+H Y+++Q T G+V+VD HAAHER+++E++ Sbjct: 435 QAPAAVAEPVAAPPADDDDAHPLGFAVAQLHGIYVLAQNTRGMVLVDMHAAHERILYEQL 494 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + + ++ Q LL P E E + L LG P +A+R +P + Sbjct: 495 KTALETKRVEVQPLLIPVTFAASPVEIGTAEEFRDTLTLLGFDISAVSPTTLAVRSVPTL 554 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 L K + L RD++ ++ + L +R +LAT+AC+ ++R+ R++ EMN LLR Sbjct: 555 LQKADAQALARDVLRDLHAYGGSRVLAERQNELLATLACHSAVRANRRLNLDEMNALLRR 614 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ME + QCNHGRPT+I+L ++D+++LF R Sbjct: 615 MEATERADQCNHGRPTWIQLTVADLDRLFLR 645 >gi|77464678|ref|YP_354182.1| DNA mismatch repair protein [Rhodobacter sphaeroides 2.4.1] gi|77389096|gb|ABA80281.1| DNA mismatch repair protein MutL [Rhodobacter sphaeroides 2.4.1] Length = 632 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 256/602 (42%), Positives = 382/602 (63%), Gaps = 11/602 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E IN+IAAGE++ERP+ A+KEL+EN+LDA + R+ IA GGK+ ++TD+G G Sbjct: 31 IRQLDEAAINRIAAGEVVERPASAVKELVENALDAGARRIAVDIACGGKALIRVTDDGCG 90 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT++++P+A+ RH TSKI D +I +FGFRGEALPS+ AV LT+ SR + GAQI Sbjct: 91 MTADDLPLALSRHATSKIDGSDLLDIRSFGFRGEALPSLAAVGRLTITSRVAEAE-GAQI 149 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 A+S +I VRP A+ GT+VE+RDLFF PARL FL++++ ET I +V+RR+A+A P+ Sbjct: 150 AVSAGRIEPVRPAALGAGTVVELRDLFFATPARLKFLRTDRAETQAIAEVVRRLALAEPE 209 Query: 182 VSFTFSTI--KSNRYKMNFQSTNGNF----PERISQVIGEDFINNAVELNEKSNEITLQG 235 V FT + R ++ G+ R+++V+G +F NA+ ++ + LQG Sbjct: 210 VGFTLTDHSAGEPRLLFRAEAEGGDLFDALHRRVARVVGAEFAENALRIDVAREGLRLQG 269 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y +PT++RG+ ++F+NGR V D+ +L +R Y + + RYP VL L DP++V Sbjct: 270 YAALPTYSRGSGVAQFLFVNGRPVLDRMLLGALRAGYMDVLSRDRYPAAVLNLICDPQRV 329 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHPAK+ +RFR +R I+ ++++A+ G S+ ++ + + +F + Sbjct: 330 DVNVHPAKAEVRFREAGEVRGLIVTALRQALAGAGHRASTTVAGETLEAFRPERPAAAGP 389 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE---SEATHYQLGIACAQ 412 + + + + P+ VE EA LG A AQ Sbjct: 390 GPASRIYQMDRPSVAAVARSFAFQAPEPAMPGLAEAPAARVEAPAAEEAHDRPLGAARAQ 449 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 IH N+I++QT GLVIVDQHAAHERL++EK+++ + T I Q LL PEI++L + A Sbjct: 450 IHGNWILAQTESGLVIVDQHAAHERLVYEKLKRQRDETGIARQALLIPEIVELSPTDAAR 509 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 ++E ++L G+ E FG A+A+RE+PAIL K LLRDI+D++ D ++ LQ R Sbjct: 510 LLEAADELASAGLVIEPFGGGAVAVREVPAILGKVEAAPLLRDILDDLADLGSSDRLQAR 569 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 ++ +L+ MAC+GS+RSGR +++ EMN LLREME P S QCNHGRPT+++LKL+DIE+LF Sbjct: 570 MDAVLSRMACHGSVRSGRALRAEEMNPLLREMEATPLSGQCNHGRPTYVELKLADIERLF 629 Query: 593 GR 594 GR Sbjct: 630 GR 631 >gi|87122647|ref|ZP_01078524.1| DNA mismatch repair protein [Marinomonas sp. MED121] gi|86162105|gb|EAQ63393.1| DNA mismatch repair protein [Marinomonas sp. MED121] Length = 637 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 223/633 (35%), Positives = 361/633 (57%), Gaps = 40/633 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ + GG +I DNG Sbjct: 3 RINLLSPRLANQIAAGEVVERPASVVKELLENSLDAGATQLDVEVEQGGVRQIKIRDNGA 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+A+ RH TSKI DD + + GFRGEAL SI +VS L L S+ Sbjct: 63 GIVKDDLPLALSRHATSKIHTLDDLEAVQSLGFRGEALASISSVSRLLLTSKAKGEQDAW 122 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ G+ + ++V+P + GT +EVRDLFF PAR FL++++ E N +++V++R+A++ Sbjct: 123 RVEAEGKDMGANVKPASHPEGTCIEVRDLFFNTPARRKFLRTDKTEFNHLSEVVKRLALS 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F S Y + + + R++ ++G+ F+ NA+ ++ ++ + L G+ G Sbjct: 183 RYDVAFRLSHDGKQVYDLRAVTDQMHAEHRLATLLGKSFVQNALAIDVEAAGLRLWGWIG 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL LE+DP VDVN Sbjct: 243 LPTFSRSQADLQYFFVNGRVVKDKLVAHAVRQAYRDVLYNGRHPTFVLYLELDPATVDVN 302 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ----------- 347 VHP K +RFR+ ++ +F+ I K + ++ L ++ Q Sbjct: 303 VHPTKHEVRFRDGRLVHDFLFSKIHKVLADVRPEATAELDVVDNAAVSQSITQQDSLTLS 362 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE---------------- 391 + +P T S + + ++S + S ++ Sbjct: 363 NRSPMTPGAMGDVSWMSAASSAPVTSGQVSGQMGVMSQMADFAHQVTSSDVPVSNVNPLT 422 Query: 392 ---------DNDPVEESEATHYQL-GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 D V E+E + G A AQ+H YI+S+ GL++VD HAAHER+++E Sbjct: 423 GEVIERAPMYKDGVAEAERSGMPPLGFAIAQLHGIYILSENQHGLIVVDMHAAHERILYE 482 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 KM+ F + +I SQ LL P I + + E L+ E DE G++ ER GP +I +RE+P Sbjct: 483 KMKNAFYAKQIVSQPLLVPINISVAQSEADLVEEADEVFSSFGLRVERSGPESIMVREVP 542 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 ILS+ ++ L+RD++ ++I TT L+ R ++ATMAC+GS+R+ RK+ EMN LL Sbjct: 543 VILSQGHVENLVRDVVSDLIMHGTTDILEARSNELMATMACHGSVRANRKLTIAEMNSLL 602 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R+ME S QCNHGRPT+ ++ +S+++KLF R Sbjct: 603 RDMEITERSGQCNHGRPTWTQMTMSELDKLFLR 635 >gi|92118635|ref|YP_578364.1| DNA mismatch repair protein [Nitrobacter hamburgensis X14] gi|123083577|sp|Q1QIP3|MUTL_NITHX RecName: Full=DNA mismatch repair protein mutL gi|91801529|gb|ABE63904.1| DNA mismatch repair protein MutL [Nitrobacter hamburgensis X14] Length = 603 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 230/602 (38%), Positives = 363/602 (60%), Gaps = 8/602 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E ++N+IAAGE++ERP+ +KEL+EN++DA + R++ GGG+ ITD+G Sbjct: 1 MPVRQLPETVVNRIAAGEVVERPASVVKELVENAIDAGAGRIDIFTDGGGRRRIGITDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT ++ +AV RH TSK+ D D I T GFRGEALPSIGAV+ L + +R Sbjct: 61 GGMTKADLALAVDRHATSKLDDEDLLRIRTLGFRGEALPSIGAVAKLGITTRHGSEPHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + S++ P A+ GT VEV DLF+ PARL FLK+++ E I +V+RR+A+A Sbjct: 121 SLTVEGGRKSAIVPAALTQGTRVEVSDLFYATPARLKFLKTDRTEAEAIREVVRRLAMAR 180 Query: 180 PKVSFTFSTIKS-NRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P ++FT + + R+ ++G DF +A+ + + + +T++G+ Sbjct: 181 PDIAFTLAGEERAPVTWTAALPGAAGQLTRLGDILGADFRCSAIAVRAERDGVTVEGFAA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P+ R NA Y+F+NGR V+DK I+ +R AY++ +P R+PVV L + P++VD N Sbjct: 241 APSLTRANALGQYLFVNGRPVRDKLIIGAVRAAYSDYLPRDRHPVVALFVTTAPQEVDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK+ +RFRN ++R I+ ++++ + ++G T++ ++++F P+ + Sbjct: 301 VHPAKTEVRFRNAGLVRALIVHALKEGLAREGRRTAANSDGAVLTAFRPAAVPRPANWDW 360 Query: 359 ATSLTNT------QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 S + P+ +DP ++ LG A Q Sbjct: 361 RQSPASPVGAGPWSGGATAAAFAAPGQTAFDVGAPSADVRSDPNPVADLIDRPLGAARTQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 IH+ YI++QT DGL++VDQHAAHER+++EK++ + Q LL P+I++L E Sbjct: 421 IHETYIVTQTRDGLIVVDQHAAHERIVYEKLKAALERDGVQRQILLIPDIVELDEATVEK 480 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 +++ +L + G+ E FGP A+A+RE P++L K N LLRD+ + + + L+ R Sbjct: 481 LIDRAPELEKFGLAIESFGPGAVAVRETPSLLGKTNAAALLRDLAEHMAEWDEALPLERR 540 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 + ++ ATMAC+GS+R+GR ++ EMN LLREME PNS QCNHGRPT+++LKL+DIEKLF Sbjct: 541 LMHVAATMACHGSVRAGRILKPEEMNALLREMEDTPNSGQCNHGRPTYVELKLADIEKLF 600 Query: 593 GR 594 GR Sbjct: 601 GR 602 >gi|92113401|ref|YP_573329.1| DNA mismatch repair protein [Chromohalobacter salexigens DSM 3043] gi|123387512|sp|Q1QY28|MUTL_CHRSD RecName: Full=DNA mismatch repair protein mutL gi|91796491|gb|ABE58630.1| DNA mismatch repair protein MutL [Chromohalobacter salexigens DSM 3043] Length = 644 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 200/637 (31%), Positives = 337/637 (52%), Gaps = 44/637 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L ++ NQIAAGE++ERP+ +KEL+EN++DA S R+E + GG ++ D+G Sbjct: 6 RIHILDPRLANQIAAGEVVERPASVVKELVENAIDAGSQRIEIDLESGGARLIRVRDDGR 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT-G 118 G+ E++P+A+ RH TSKI+ DD + + GFRGEAL SI +VS L L+S + G Sbjct: 66 GIDQEDLPLALSRHATSKIASLDDLEGVDSLGFRGEALASISSVSRLELISNTHDEPSDG 125 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 ++ G ++ P G+ V VRDLFF PAR FL++E+ E + + RR+A+ Sbjct: 126 WRVVAEGRQMEPRVTPAPHPRGSSVVVRDLFFNTPARRKFLRTEKTEFGHVEEAFRRLAL 185 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + + + +++ + + R+ ++G F+ NA+ ++ ++ + L G+ Sbjct: 186 SRYDIGWILRHNQKVVHQLRAGDASTSMERRVGALLGRKFLENALHVDIEATGLRLWGWV 245 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+PT +R A+Q Y F+NGR V+D+ + +R AY + + GR+PV VL LE+DP VDV Sbjct: 246 GLPTHSRAQADQQYFFVNGRVVRDRLVAHAVRQAYRDVMFHGRHPVFVLYLELDPHVVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK----------------- 340 NVHP K +RFR+ ++ +F+ S+ +A+ + +S Sbjct: 306 NVHPTKHEVRFRDGRLVHDFLFSSLHRALADVRPNATSTEGGDEATPSTDATTATAAEAS 365 Query: 341 -------------MISSFHQDNAPKTH-----LPKYATSLTNTQEKLFLQENRLSTNDLL 382 +++ + P H + Y + L + + + + Sbjct: 366 AGQAEPRWQQQGMALAAGQERERPAAHRVREFMAGYRALHPEHEASLLTPQPQEAAEEAA 425 Query: 383 PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 + P S E + LG A AQ+H YI+SQT GLV+VD HAAHER+ +E+ Sbjct: 426 GTPAPPASSSPAMAETDDTQAPPLGYAVAQLHGVYILSQTERGLVVVDMHAAHERITYER 485 Query: 443 MRQDFNSTK-----ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 M+Q + + +Q LL P I E RLG++ + GP + + Sbjct: 486 MKQQVHGDGQALGRLQTQPLLVPVSIAASAREVETAENERATFERLGVELDVAGPETLLV 545 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 R++P +L ++ L+ D++ ++ + L+ I +L++MAC+GS+R+ R++ EM Sbjct: 546 RQVPVLLGNADVEALIHDMLGDLERFGRSDRLEVHINELLSSMACHGSVRANRRLTVPEM 605 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N LLR+ME+ S QCNHGRPT+ ++ + +++KLF R Sbjct: 606 NALLRDMERTERSGQCNHGRPTWTEMSMHELDKLFLR 642 >gi|237748580|ref|ZP_04579060.1| DNA mismatch repair protein mutL [Oxalobacter formigenes OXCC13] gi|229379942|gb|EEO30033.1| DNA mismatch repair protein mutL [Oxalobacter formigenes OXCC13] Length = 629 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 209/606 (34%), Positives = 333/606 (54%), Gaps = 18/606 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L++ +I+QIAAGE++ERPS +KEL+EN++DA S+++E + GG I DNG Sbjct: 27 SIQLLTDTLISQIAAGEVVERPSAVVKELLENAVDAGSTQIEIRLENGGIKRIAIIDNGC 86 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A+ RH TSKI+ D N+ T GFRGEAL SI +V+ LTL SR + Sbjct: 87 GIPPEQLRLALTRHATSKIASLNDLENVATLGFRGEALASIASVADLTLQSRTAEEPHAW 146 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + ++ P + GT V+V +L+ PAR FLKSEQ E +V+RR+A+A Sbjct: 147 QMRGNDPT-GTLSPCSGGFGTTVDVHELYSNTPARRKFLKSEQTEYGHCAEVVRRIALAQ 205 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS----NEITLQG 235 P + FT + N N +R +QV+GE F + + ++ N + L G Sbjct: 206 PGIRFTLMHNGKATAQWNAH----NLSQRCNQVLGEQFAQSQLPIDITVGEGANSLRLYG 261 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 + G PT +R + Y ++NGR V+D+ + +R AY + + RYP +L L +DP V Sbjct: 262 FIGQPTASRTRGDMQYFYVNGRFVRDRLLTHAVRAAYEDVLHGNRYPAYLLYLTLDPSLV 321 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK----KGISTSSVLSKKMISSFHQDNAP 351 DVNVHPAK +RFR+ I +FI QS+ + + + + S+ + + Sbjct: 322 DVNVHPAKIEVRFRDSRSIHHFIHQSVSRTLAQTMEPHAAADESIAYAETPARSPVSWHS 381 Query: 352 KTHLP-KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND--PVEESEATHYQLGI 408 T P Y +++R +E +D ++E + LG Sbjct: 382 NTPSPVSYGVEQKTASYGALFRQSREQEESHSSPLPMPATELSDLFRIDEKTEEDFPLGF 441 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 A AQ+H YI++Q GLV+VD HAAHER+++EK++ + + +QTLL P + + E Sbjct: 442 ALAQLHDIYILAQNRHGLVLVDMHAAHERIVYEKLKTALDEKTLQTQTLLIPVTMKVSEV 501 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 E +E+ E L LG P IA+R +P +L + + LR+I+ ++ + T+ Sbjct: 502 EAGTALENRETLQELGFDISALTPETIAVRTVPTLLREADTANALRNILRDMHEYGTSSI 561 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 +++ +LAT+AC+ ++R+ R + EMN LLR+ME+ + QCNHGRPT+ +L LS++ Sbjct: 562 AKEKRNELLATVACHNAVRANRSLTITEMNALLRQMEQTERADQCNHGRPTWTQLGLSEL 621 Query: 589 EKLFGR 594 + LF R Sbjct: 622 DALFLR 627 >gi|152980279|ref|YP_001352152.1| DNA mismatch repair protein [Janthinobacterium sp. Marseille] gi|166232093|sp|A6SV55|MUTL_JANMA RecName: Full=DNA mismatch repair protein mutL gi|151280356|gb|ABR88766.1| DNA mismatch repair protein [Janthinobacterium sp. Marseille] Length = 613 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 204/606 (33%), Positives = 331/606 (54%), Gaps = 17/606 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ LS+++I+QIAAGE++ERPS +KEL+EN+LDA ++ + + GG ITDNG Sbjct: 10 PIQPLSDQLISQIAAGEVVERPSAVVKELLENALDAGATAITVRLEQGGVKRIAITDNGR 69 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+T E++P+A+ RH TSKI+ + N+ T GFRGEAL SI +V+ LTL SR Sbjct: 70 GITPEQLPLALARHATSKINSLNELENVGTLGFRGEALASIASVAQLTLTSRTADAQHAW 129 Query: 120 QI--AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 +I ++ ++V P + PGT V+V+DL+F PAR FLK+EQ E +V+RR+A+ Sbjct: 130 EISGVQGSDQKNTVAPSSGAPGTTVDVQDLYFNTPARRKFLKTEQTEFGHCAEVVRRIAL 189 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + P V+F+ S + +R + ++G +F + L E + + L G+ Sbjct: 190 SRPDVAFSLSHNGKTVDHW----AVNDIAKRSAHILGSEFSGARLPLEETAGPLHLHGFI 245 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+PT ++ + Y ++NGR V+DK ++ +R+AY + + RYP V+ L++DP VDV Sbjct: 246 GLPTASKARGDAQYFYVNGRFVRDKLLMHAVRSAYQDVLHGDRYPSYVISLDLDPALVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINK-----KGISTSSVLSKKMISSFHQDNAPK 352 NVHP+K +RFR+ + F+ ++ +A+ + G S + + ++ Sbjct: 306 NVHPSKIEVRFRDSRSVHQFVFHAVSRALAQTSATAFGAVPSPTPAPSGALPWLREQQQT 365 Query: 353 THLPKYATSLTNTQEKLF----LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 T P++ Q + T + N P + + LG Sbjct: 366 TFAPQFQQQYGVAQTTANYGALFNTDGAVTPLGTEPAPAFAAFTNSPAQTMSDDEFPLGF 425 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 A AQ+H +I++Q T GLV+VD HAAHER+++E+++ + + Q LL P + Sbjct: 426 ALAQLHGIFILAQNTKGLVLVDMHAAHERILYEQLKNALDDNAMQVQPLLIPITFYADDV 485 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 E + E L LG P +AIR +P +L + L RD++ ++ + + Sbjct: 486 EVGTAEDSKETLLSLGFDIAVMSPTTLAIRAVPTLLKNADAQSLARDVLRDVREYGGSRV 545 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 L +R +L T+AC+ ++R+ R + EMN LLR+ME + QCNHGRPT+++L LSD+ Sbjct: 546 LVERRNELLGTLACHTAVRANRMLTGPEMNALLRQMEATERADQCNHGRPTWVQLGLSDL 605 Query: 589 EKLFGR 594 +KLF R Sbjct: 606 DKLFER 611 >gi|94311840|ref|YP_585050.1| DNA mismatch repair protein [Cupriavidus metallidurans CH34] gi|93355692|gb|ABF09781.1| methyl-directed mismatch repair protein [Cupriavidus metallidurans CH34] Length = 655 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 206/643 (32%), Positives = 336/643 (52%), Gaps = 57/643 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ +KEL+EN+LDA ++++ + GG ITDNG Sbjct: 18 PIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLGIRLEEGGVRRIVITDNGC 77 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++E+P+A+ RH TSKI+ D+ ++ T GFRGEAL SI +VSHL L SR Sbjct: 78 GIPADELPVALMRHATSKIASLDELESVLTLGFRGEALASIASVSHLVLTSRTATATHAT 137 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI+ ++P + GT+++V+ L+F PAR FLKSEQ E ++IRR A+A Sbjct: 138 QISADT---GHLQPASGGVGTMIDVQHLYFNTPARRKFLKSEQTELGHCLEMIRRAALAR 194 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ + N G+ R +QV+G DF + L+E+++ + L G+ G+ Sbjct: 195 PDVTISVHHNGKPLEHWNA----GDVATRTAQVLGSDFARARLPLDEQADALHLYGFAGL 250 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RG +Q Y F+NGR V+DK + +R+AY + + R+P V+ L++ P VDVNV Sbjct: 251 PTASRGRPDQQYFFVNGRFVRDKLLNHAVRSAYQDVLHGDRFPSYVICLDLPPELVDVNV 310 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH----- 354 HP+K +RFR + F+ ++Q+ + ++ L ++ + + P Sbjct: 311 HPSKIEVRFRESRAVHQFVYHAVQRCLARQAGEQGDSLHSEIADEAGRPSMPAARPVGAP 370 Query: 355 --------------------------------------LPKYATSLTNTQEKLFLQENRL 376 + Q +L + + Sbjct: 371 GAPGAAPQWVNYSAGRQTELGIAQPRQAYLGMVRDAAGQGSARPWQPSPQPPAWLADAQA 430 Query: 377 STNDLLPS-----DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 + D P P + LG A AQ+H Y+++Q GLV+VD Sbjct: 431 ARADEPPGLLDRLPQQPLQPSTLPAAGEGDDDHPLGYAVAQLHGIYVLAQNARGLVLVDM 490 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 HAAHER+++E+++ + ++ Q LL P + E EH E L LG + Sbjct: 491 HAAHERILYEQIKTALEARELAVQPLLIPVTLPASPVEIGAAEEHQETLQLLGFDIKPVS 550 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRK 551 P +A+R IPA+L + + L RD++ ++ + L +R +LAT+AC+ ++R+ RK Sbjct: 551 PTTLAVRAIPALLKQADTEALARDVLRDLQAYGGSRVLAERQNELLATLACHSAVRANRK 610 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + EMN LLR+ME+ + QCNHGRPT+++L ++++++LF R Sbjct: 611 LTVEEMNALLRQMEQTERADQCNHGRPTWVQLTVAELDRLFLR 653 >gi|319784249|ref|YP_004143725.1| DNA mismatch repair protein MutL [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170137|gb|ADV13675.1| DNA mismatch repair protein MutL [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 624 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 273/624 (43%), Positives = 400/624 (64%), Gaps = 31/624 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+LSE +INQIAAGE+IERP+ +KEL+EN+LDA +SRVE V +GGG + ++TD+G Sbjct: 1 MPIRQLSETMINQIAAGEVIERPASVVKELVENALDAGASRVEIVTSGGGLNLIRVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ E+ +A+ RHCTSK+++D ++I + GFRGEALPSIG+VS L++ SR +++ A+ Sbjct: 61 SGIPERELALAIARHCTSKLTEDINDIRSLGFRGEALPSIGSVSRLSIRSRTAASDSAAE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G ++ VRP A N GT VEVRDLFF PARL F+K E+ E++ +DV++R+AIA+P Sbjct: 121 IGIEGGRVLPVRPAAANRGTTVEVRDLFFATPARLKFMKGERAESSATSDVVKRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNF--QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V FT + + ++ S G+ ++QV+G DF +N++ L+ + + L G+ Sbjct: 181 AVRFTLAGSDRSTLELPAADDSAEGSLRR-VAQVMGTDFPDNSIALDAMRDGVHLTGHAS 239 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 IP+F R NA Q Y ++NGR V+DK I IR AYA+ +P R+ V VL L +DP VDVN Sbjct: 240 IPSFTRANALQQYAYVNGRPVRDKLIAGAIRGAYADVLPRDRHAVTVLFLTLDPAIVDVN 299 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ----------- 347 VHPAK+ +RFR+P ++R I+ +I++A+ G+ ++ + M+++F Sbjct: 300 VHPAKADVRFRDPGLVRGLIVGAIRQALADAGVRAATTGAAGMMAAFRPGAASYGHGGPA 359 Query: 348 ------DNAPKTHLPKYATSLTNTQEKLF-------LQENRLSTNDLLPSDDPTYSEDND 394 D A + P + Q L ++ L ++ D + + Sbjct: 360 NGHRSYDAAYRASGPSGFDPARSPQRPLDMGFDGAGFEQRGLRESEQAAFDAGPLASADA 419 Query: 395 PVEESEATHYQLGIACA----QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 + EA LG Q+H+NYI++QT D L+IVDQHAAHERL++E ++ +S Sbjct: 420 RAGQDEAAETLLGAVLGAARAQVHENYIVAQTRDSLIIVDQHAAHERLVYEALKNALHSR 479 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 + SQ LL PEIIDL E + + H E L R G+ ERFGP A+A+RE P++L + N+ Sbjct: 480 PVPSQMLLLPEIIDLPEEDAERLALHSETLARFGLGIERFGPGAVAVRETPSMLGEANVQ 539 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 QL+RD+ DEI D+ T TL++R++ I ATMAC+GS+RSGR +++ EMN LLR+ME P S Sbjct: 540 QLVRDLADEIADNDTVDTLKERLDKIAATMACHGSVRSGRLLKAEEMNALLRQMEATPGS 599 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+I+LKL+DIE+LFGR Sbjct: 600 GTCNHGRPTYIELKLADIERLFGR 623 >gi|153010372|ref|YP_001371586.1| DNA mismatch repair protein [Ochrobactrum anthropi ATCC 49188] gi|166232099|sp|A6X3F3|MUTL_OCHA4 RecName: Full=DNA mismatch repair protein mutL gi|151562260|gb|ABS15757.1| DNA mismatch repair protein MutL [Ochrobactrum anthropi ATCC 49188] Length = 626 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 275/626 (43%), Positives = 395/626 (63%), Gaps = 33/626 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ IKEL+EN++DA ++R+E V GGGK+ ++TDNG Sbjct: 1 MPIRHLSETIINQIAAGEVIERPASVIKELVENAIDAGATRIEVVTGGGGKTLLRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ +E+P+AV RHCTSK+SDD +I GFRGEALPSIG+V+ LTL SRP ++G + Sbjct: 61 SGIPVDELPLAVSRHCTSKLSDDVHDIRALGFRGEALPSIGSVAKLTLKSRPQDADSGFE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 +++SG + RP A+N GTI EVRDLFF PARL F+K+++ E + ITDV++R+AIA+P Sbjct: 121 VSVSGGHLDGPRPSALNRGTIAEVRDLFFATPARLKFMKTDRAEASAITDVVKRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V F+ + ++ S ERI+QV+G++F NA+ ++ + + + L G+ GI Sbjct: 181 HVRFSLAGTDRTPLELAATGSGAEATLERINQVLGKEFGENALAIDAERDGVRLAGFVGI 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ NRGNA + ++NGR V+DK + +R AYA+ + R+PV VL L +DP VDVNV Sbjct: 241 PSHNRGNALHQFAYVNGRPVRDKQLFGALRGAYADVMARDRHPVAVLFLTLDPAFVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ +RFR+P ++R I+ +I++A+ + GI ++ + M+ +F + + P + Sbjct: 301 HPAKADVRFRDPGLVRGLIVGAIKQALAQSGIRPATSGADAMLQAFRAEGF-QPPSPSFT 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED--------------------------- 392 + ++ +S+ S + Sbjct: 360 SRPSSAGYASGSWHPAVSSPRTEWSPQTAHPAHRPLDLGAAPSFQESDQATLATVNVLAA 419 Query: 393 ----NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 E LG A AQIH NYI+SQT D LVIVDQHAAHERL++E ++ + Sbjct: 420 DARATRDEAPVELQQKPLGAARAQIHANYIVSQTEDSLVIVDQHAAHERLVYEALKNALH 479 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 S I+ Q LL PEI+DL E + + H E L R G+ E+FGP AIA+RE PA+L + N Sbjct: 480 SRPISGQMLLIPEIVDLPEEDAERLATHAETLARFGLGIEQFGPGAIAVRETPAMLGEMN 539 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 + QL+RD+ DEI + T+ L+ + ++ ATMAC+GS+RSGR+++ EMN LLREME P Sbjct: 540 VQQLIRDLSDEIAEHDTSEGLKAMLNHVAATMACHGSVRSGRRLKPEEMNALLREMEATP 599 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 S CNHGRPT+I+LKL+DIE+LFGR Sbjct: 600 GSGTCNHGRPTYIELKLTDIERLFGR 625 >gi|295691031|ref|YP_003594724.1| DNA mismatch repair protein MutL [Caulobacter segnis ATCC 21756] gi|295432934|gb|ADG12106.1| DNA mismatch repair protein MutL [Caulobacter segnis ATCC 21756] Length = 638 Score = 551 bits (1421), Expect = e-154, Method: Composition-based stats. Identities = 242/637 (37%), Positives = 377/637 (59%), Gaps = 43/637 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L + +N+IAAGE++ERP+ AIKEL++N++DA ++R+E GGG + + D+G Sbjct: 1 MPIRRLPPETVNRIAAGEVVERPASAIKELVDNAIDAGATRIEVEAHGGGLTRILVADDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD------FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ 114 G+++EE+P+A++RH TSK++ D IHT GFRGEALPSIG+V+ L + SR Sbjct: 61 CGLSAEELPVAIERHATSKLAPDADGLWDLLRIHTMGFRGEALPSIGSVARLQISSRAKG 120 Query: 115 NNTGAQIAISGEKISSVRPV--AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 I + G ++ V P G +EVRDLF+ PARL F+KSE+ E IT+ I Sbjct: 121 EKDAFSILVEGGQVGDVAPAAFPGPHGARIEVRDLFYATPARLKFMKSERAEALAITEEI 180 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNF-QSTNGNFPERISQVIGEDFINNAVELNEKSNEI 231 +R A+A V F+ ++ R++ V+G +F NA+E+++ + + Sbjct: 181 KRQAMANESVGFSLDIDGRRVLRLPPEHPGPQGRLARLAAVLGREFQENALEIDQVRDGV 240 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 L G+ G+PT+NRGNA Y+F+NGR V+D+ + +R AYA+ + R+P L + +D Sbjct: 241 RLSGFAGLPTYNRGNAAHQYLFVNGRPVRDRLLQGALRAAYADFLARDRHPTAALYVTLD 300 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 +VDVNVHPAK+ +RFR+P ++R I+ +++ A+ G S+ ++ + + S +P Sbjct: 301 TAEVDVNVHPAKAEVRFRDPALVRGLIVGALRHALAGAGHRASTTVAAQALDSIRAQQSP 360 Query: 352 KT-HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES----------- 399 + P + + + + ++ D P +E + VE S Sbjct: 361 FPGYQPGPSAAGFSAWREGGWAPPTQRPLNMQSMDLPGLNEVSARVEPSYGGELAEVVRE 420 Query: 400 ----------------------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 + Y LG A AQ+H+ YI++QT DG+VIVDQHAAHER Sbjct: 421 AYASVAFEDRPITDHPSAAAPFDPVDYPLGAARAQVHETYIVAQTRDGMVIVDQHAAHER 480 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 L++E+M+ + + + QTLL PE++DL E ++ E+L LG+ E FGP A+ + Sbjct: 481 LVYERMKGEMAAGGVARQTLLLPEVVDLDPAEAERVIARAEELANLGLVIESFGPGAVLV 540 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 RE PA+L K + L+RDI D++ ++ L++R+E + +TMAC+GS+R+GR++ EM Sbjct: 541 RETPALLGKTDAAGLIRDIADDLAENGAALALKERLEEVCSTMACHGSVRAGRRLNGAEM 600 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N LLREME P+S QCNHGRPT+++LKL+DIEKLFGR Sbjct: 601 NALLREMEATPHSGQCNHGRPTYVELKLADIEKLFGR 637 >gi|300310168|ref|YP_003774260.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1] gi|300072953|gb|ADJ62352.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1] Length = 627 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 212/626 (33%), Positives = 330/626 (52%), Gaps = 39/626 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L +++I+QIAAGE+IERPS +KEL+EN+LDA S+++ + GG ITDNG Sbjct: 6 PIQALPDQLISQIAAGEVIERPSAVVKELLENALDAGSTQITVRLEQGGVKRIAITDNGR 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A+ RH TSKI+ D N+ T GFRGEAL SI +V+ LT+ SR Sbjct: 66 GIPPEQLPLALARHATSKIASLTDLENVSTLGFRGEALASIASVAQLTVTSRTADAPHAW 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I S + +V P + GT ++V+DL+F PAR FLKSEQ E +V+RR+A+A Sbjct: 126 EITGS--QFGTVAPASGAQGTTIDVQDLYFNTPARRKFLKSEQTEYGHCAEVVRRIALAR 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF+ S N G F +R + ++G++F N + L+E + + L G+ G+ Sbjct: 184 PDVSFSLSHNGKTVDHWNV----GEFAKRSAHILGDEFANARLPLDESAGPLRLHGFVGL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT ++ A+ Y ++NGR V+DK + +R AY + + RYP L L +DP VDVNV Sbjct: 240 PTASKARADGQYFYVNGRFVRDKLLTHAVRAAYQDVLHGDRYPAYALSLTLDPALVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--------------- 344 HP+K +RFR+ + F+ ++ +A+ + + L S Sbjct: 300 HPSKIEVRFRDSRAVHQFVFHAVSRALAQTSAVSFGNLPGAAPQSDDSAGAPPPAANAPL 359 Query: 345 -----FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 Q + +++N + + S + D Sbjct: 360 PWIGEQQQQSFSAQFAEAPRPFSFGGNSGFGVRQNTEAYGSMFRSAPTSGEPDGSAPAAY 419 Query: 400 EAT-----------HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 AT + LG A AQ+H Y+++Q GLV+VD HAAHER+++E+++ + Sbjct: 420 GATPAAAPAALPEGDFPLGFALAQLHGIYVLAQNQAGLVVVDMHAAHERILYEQLKTALD 479 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 ++ Q LL P E + EH E L LG P +A+R +PA+L + Sbjct: 480 GNEMFVQPLLIPVTFYADPVEVGTVEEHQETLSALGFDIAVMSPTTLAVRAVPALLKNAD 539 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 L RD++ ++ + + L +R +L T+AC+ ++R+ R + EMN LLR+ME Sbjct: 540 AQTLARDVLRDVREYGGSRVLLERRNELLGTLACHTAVRANRSLTLPEMNALLRQMEATE 599 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ LSD++KLF R Sbjct: 600 RSDQCNHGRPTWTQMGLSDLDKLFLR 625 >gi|253996214|ref|YP_003048278.1| DNA mismatch repair protein MutL [Methylotenera mobilis JLW8] gi|253982893|gb|ACT47751.1| DNA mismatch repair protein MutL [Methylotenera mobilis JLW8] Length = 610 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 206/610 (33%), Positives = 335/610 (54%), Gaps = 21/610 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ A+KEL+ENSLDA S+ ++ + GG ++TDNG Sbjct: 3 TIRLLPDQLISQIAAGEVVERPASALKELLENSLDAGSTDIQVSLLQGGIKQMRVTDNGA 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A+ RH TSKIS +D ++ + GFRGEAL SI ++S L+SR + Sbjct: 63 GVAKEDLMLALTRHATSKISSLEDLESVASLGFRGEALASIASISRTQLLSRQSGSKHAW 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I G ++S++ P A++ GT++EV DL+F PAR FLK+E E ++ R+A++ Sbjct: 123 RIGSEGSEVSTIEPAALDAGTVIEVSDLYFNTPARRKFLKTEATEFGHCEEMFTRIALSR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VS + G R S+V+G +F+ ++ ++E + + L G Sbjct: 183 PDVSLMLQHNGRALSRF----AIGQPERRFSEVLGSEFVAESIPVDESAAGLRLWGMAAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTFNR + + YV++NGR V+DK I IR AY + + R+P VL LE+DP VDVNV Sbjct: 239 PTFNRNSRDTQYVYVNGRFVRDKVIAHAIRQAYQDVLHHDRHPAFVLFLELDPSLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ +RFR+ + FI ++ KA+ +++V + + + T L Sbjct: 299 HPAKTEVRFRDSQAVHRFIFHALHKALAIPTGVSNAVTANQAQYNPFSPQVSNTALANGG 358 Query: 360 TSLTNTQE--KLFLQENRLSTNDLLPSDDPTYSED---------NDPVEESEATHYQLGI 408 Q L E L ++ + ++ ++ Y LG Sbjct: 359 MLYPTQQSQINLSAHEPAGFYQTLFGNNANQPATPATLTLDVLADNSLKAESINEYPLGF 418 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 A Q+H Y+++Q +GLV++D HAAHER+++EK++ +S + Q LL P + + Sbjct: 419 AVGQVHGVYVLAQNKEGLVVIDMHAAHERIMYEKLKHALDSQTVQMQPLLLPVSFNADKL 478 Query: 469 ECALIME----HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 E A + E + L +LG P +A+R +P +L + L RD++ ++ + Sbjct: 479 EVATVHEALAGNQATLQQLGFDIAILSPTTLAVRAVPTMLQDADAVILARDVLRDLREYG 538 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 + L +R +L TMAC+ ++R+ R + EMN LLR+ME S QCNHGRPT+ ++ Sbjct: 539 ASRVLTERRNELLGTMACHAAVRANRSLTIPEMNALLRDMEATERSGQCNHGRPTWFQVS 598 Query: 585 LSDIEKLFGR 594 + D++K+F R Sbjct: 599 MGDLDKMFMR 608 >gi|260464400|ref|ZP_05812591.1| DNA mismatch repair protein MutL [Mesorhizobium opportunistum WSM2075] gi|259029870|gb|EEW31155.1| DNA mismatch repair protein MutL [Mesorhizobium opportunistum WSM2075] Length = 641 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 276/624 (44%), Positives = 396/624 (63%), Gaps = 31/624 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+LSE +INQIAAGE+IERP+ +KEL+EN+LDA +S+VE V AGGG + ++TD+G Sbjct: 18 MPIRQLSETMINQIAAGEVIERPASVVKELVENALDAGASKVEVVTAGGGLNLIRVTDDG 77 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ E+ +A+ RHCTSK+++D +I + GFRGEALPSIG+VS L++ SR ++ A+ Sbjct: 78 SGIPEHELSLAIARHCTSKLAEDIHDIRSLGFRGEALPSIGSVSRLSIRSRTALGDSAAE 137 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G +I VRP A N GT VEVRDLFF PARL F+K E+ E++ I+DV++R+AIA+P Sbjct: 138 IGIEGGRILPVRPAAANRGTTVEVRDLFFATPARLKFMKGERAESSAISDVVKRIAIAFP 197 Query: 181 KVSFTFSTIKSNRYKMNFQ--STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V FT + + ++ S G+ ++QV+G +F +N++ ++ + L G+ Sbjct: 198 AVRFTLAGSDRSTLELPATDESAEGSLRR-VAQVMGAEFPDNSIAIDAMREGVHLTGHVS 256 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 IP+F R NA Q Y ++NGR V+DK I IR A+A+ +P R+ V VL L +DP VDVN Sbjct: 257 IPSFTRANALQQYAYVNGRPVRDKLIAGAIRGAFADVLPRDRHAVTVLFLTLDPGTVDVN 316 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA------PK 352 VHPAK+ +RFR+P ++R I+ +I++A+ GI +++ + M+++F A P Sbjct: 317 VHPAKADVRFRDPGLVRGLIVGAIRQALADAGIRSATTGAAGMMAAFRPSAASYGHGGPA 376 Query: 353 THLPKYATSLTNTQEKLF------------------LQENRLSTNDLLPSDDPTYSEDND 394 Y S + F + L D D + + Sbjct: 377 NGHRSYEASYHASGSAGFDPARSSQRPLDMGFEGGGFEHRGLREPDQAAFDAGPLASADA 436 Query: 395 PVEESEATHYQLGIACA----QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 +SEA LG Q+H+NYI++QT D LVIVDQHAAHERL++E ++ +S Sbjct: 437 RAGQSEAAETLLGAVLGAARAQVHENYIVAQTRDSLVIVDQHAAHERLVYEALKNALHSR 496 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 + SQ LL PEIIDL E + + H E L R G+ ERFGP A+A+RE P++L + N+ Sbjct: 497 PVPSQMLLLPEIIDLPEEDAERLAMHSETLARFGLGIERFGPGAVAVRETPSMLGETNVG 556 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 QL+RD+ DEI D+ T TL++R++ I ATMAC+GS+RSGR ++ EMN LLR+ME P S Sbjct: 557 QLVRDLADEIADNDTVETLKERLDKIAATMACHGSVRSGRLLKPEEMNALLRQMEATPGS 616 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+I+LKL+DIE+LFGR Sbjct: 617 GTCNHGRPTYIELKLADIERLFGR 640 >gi|294675823|ref|YP_003576438.1| DNA mismatch repair protein MutL [Rhodobacter capsulatus SB 1003] gi|294474643|gb|ADE84031.1| DNA mismatch repair protein MutL [Rhodobacter capsulatus SB 1003] Length = 617 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 273/604 (45%), Positives = 389/604 (64%), Gaps = 14/604 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + N+IAAGE++ERP+ A+KEL+EN+LDA +SR+E A GGK+ +I+D+G G Sbjct: 15 IRQLDDAAANRIAAGEVVERPASAVKELVENALDAGASRIEIAYADGGKTLIRISDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT+E++P+A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR AQI Sbjct: 75 MTAEDLPLALCRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLTITSRAEGFE-AAQI 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 +SG +I +V+P A+N GT+VE+RDLFF PARL FL++++ E I D ++R+A+A P Sbjct: 134 TVSGGRIGAVKPAALNRGTVVELRDLFFATPARLKFLRTDRTEAQAIADTVKRLAMAEPY 193 Query: 182 VSFTFSTIKSNRYKMNFQST------NGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 VSFT I + + F++ G R+ +++G F +NAV L+ I L G Sbjct: 194 VSFTLREIAGSETREIFRADAEQGELFGALSGRLGRILGRAFADNAVPLDADREGIRLTG 253 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y +PT++RG A + ++F+NGR V+DK +L +R AY + + R+P VL L DP V Sbjct: 254 YAALPTYSRGAAVEQFLFVNGRPVRDKMLLGALRAAYIDVLSRDRHPAAVLFLTCDPESV 313 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHPAK+ +RFR + R I+ I+ A+ + G +SS ++ + + + A + + Sbjct: 314 DVNVHPAKAEVRFREAGVPRGLIVTGIRHALAQSGHRSSSTVATATLGAMQPEPA-QPRI 372 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-----EATHYQLGIAC 410 + + F + L + D P + VE + E H LG A Sbjct: 373 YQMERPSSGAIRNAFAAQMPLQSFDEAPQPFTAPFAPSARVEPAPPGTAELIHRPLGAAR 432 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 AQ+H+NYII+QT G+VIVDQHAAHERL++E+++ I +Q LL PEI++L E Sbjct: 433 AQLHENYIIAQTERGMVIVDQHAAHERLVYERLKAQSAEKGIAAQALLIPEIVELSAAEA 492 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 A +++ E+LHRLG+ E FG +AIA+RE PAIL + N LLRDI+DE+ D + LQ Sbjct: 493 ARLLDVAEELHRLGLAIEPFGGSAIAVRETPAILGEINAAALLRDILDELADQGDSLRLQ 552 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 +I+ +L+ M+C+GSIRSGR+M+ EMN LLREME P S QCNHGRPT+++LKLSDIE+ Sbjct: 553 SKIDAVLSRMSCHGSIRSGRQMRVEEMNALLREMEATPLSGQCNHGRPTYVELKLSDIER 612 Query: 591 LFGR 594 LFGR Sbjct: 613 LFGR 616 >gi|126727787|ref|ZP_01743617.1| DNA mismatch repair protein [Rhodobacterales bacterium HTCC2150] gi|126702914|gb|EBA02017.1| DNA mismatch repair protein [Rhodobacterales bacterium HTCC2150] Length = 617 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 252/603 (41%), Positives = 391/603 (64%), Gaps = 10/603 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L E +N+IAAGE++ERP+ A+KEL+EN++DA ++R++ A GGK+ ++ D+G Sbjct: 14 QIRQLDEAAVNRIAAGEVVERPASAVKELVENAIDAGATRIDVSYAAGGKNLIRVVDDGH 73 Query: 62 GMTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+T++E+P+A+ RH TSKI D NIHTFGFRGEALPS+GAV L+L+SR +++ + Sbjct: 74 GITADELPLALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLSLVSRAIGSDSAFE 133 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I+++G S V+P A+ GTIV + DLF+ PARL F+++++ E I+DVI+R+A+A P Sbjct: 134 ISVNGSIQSPVKPAALTKGTIVTLADLFYATPARLKFMRTDRSEAQAISDVIKRLAMAEP 193 Query: 181 KVSFT---FSTIKSNRYKMNFQSTNGN----FPERISQVIGEDFINNAVELNEKSNEITL 233 V FT S R + + G+ R+ +++G DF NA+ + + TL Sbjct: 194 HVGFTLRDVSEGGQGRVVLRLDAEQGDFFDALHSRLKRLLGADFAANALRIEAEREGHTL 253 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 GY +PT++RG + ++F+NGR V+D+ ++ +R AYA+ + R+P VVL + DP Sbjct: 254 TGYAALPTYSRGTSVAQFLFVNGRPVKDRLLIGALRGAYADFLSRDRHPAVVLNISCDPA 313 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK- 352 +VDVNVHPAKS +RFR+P + R I+ ++ A+ G S+ ++ + +F Q+ Sbjct: 314 RVDVNVHPAKSEVRFRDPGLARGLIVSGLKHALAGAGHRASTTVADATLGAFTQEPVQGR 373 Query: 353 -THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 + + ++S + ++ + P + T + E LG A A Sbjct: 374 VYQMDRPSSSAIGRSFAMQSLDSSFGFAEANPDFNATSARVEMAEAAPELLDRPLGAARA 433 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 Q+H+NYI++QT DG+++VDQHAAHERL++EK++ + +Q LL PEII+L G+ Sbjct: 434 QVHENYIVAQTRDGMILVDQHAAHERLVYEKLKNQMAENGVAAQALLIPEIIELSVGDRD 493 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 LI+E DL LG++ E FG AIAIR PA+L + N ++ D++DE+ D + +L++ Sbjct: 494 LILEMAGDLAALGLEMEPFGGTAIAIRATPAVLGEVNAAAMIHDVLDELSDQGESRSLRE 553 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 RIE +L+ +AC+GSIRSGR+MQ+ EMN LLREME P+S QCNHGRPT+++LKL+DIE+L Sbjct: 554 RIEAVLSRIACHGSIRSGRRMQADEMNALLREMEATPHSGQCNHGRPTYVELKLADIERL 613 Query: 592 FGR 594 FGR Sbjct: 614 FGR 616 >gi|300024107|ref|YP_003756718.1| DNA mismatch repair protein MutL [Hyphomicrobium denitrificans ATCC 51888] gi|299525928|gb|ADJ24397.1| DNA mismatch repair protein MutL [Hyphomicrobium denitrificans ATCC 51888] Length = 593 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 239/600 (39%), Positives = 376/600 (62%), Gaps = 14/600 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+LS + +N+IAAGE+IERP+ +KEL+EN++D+ ++ +E V+ GG S ++TD+G Sbjct: 1 MAIRQLSPETVNRIAAGEVIERPASVVKELVENAIDSGATHIEIVVTDGGLSLIRVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI-SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++++ +AV+RH TSK+ +D +I + GFRGEALPSIG+++ L + SR + G Sbjct: 61 SGMNADDLALAVERHATSKLDEEDLFDIRSLGFRGEALPSIGSIAELEIRSRRRDSEQGF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + S++P A N GTIVEVRDLF PARL FLKSE+ ET +TDV+RR+A+A+ Sbjct: 121 SIRVMRGAKESIKPAAANSGTIVEVRDLFSATPARLKFLKSERAETMAVTDVVRRLAMAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNE----KSNEITLQ 234 P++ FT T + + + + ER+ ++G +F+ +A+E++ + + Sbjct: 181 PEIGFTLQTGEKRPVVYPRGERSSSAWLERLGAIMGHEFMADALEISGGGSGALGPMRVF 240 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G+ G+PT +R ++ Q ++F+NGR+V+DK ++ IR AY + IP GR P++ + L++ P Sbjct: 241 GFIGLPTLHRADSMQQFLFVNGRSVKDKLLIGAIRAAYGDLIPRGRSPLLAIFLDVAPPD 300 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAK+ +RFR+ +R+ +I ++++A+ G S+ I +F Sbjct: 301 VDVNVHPAKAEVRFRDAGRVRSLMIGAMRQALEAAGHRASAQGGVLTIETF------SAG 354 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 + A Q F + ++ ++ + + + E++ LG AQ+H Sbjct: 355 VLPSAPPALPPQTAAFAEPAPVAFAEIDTPSADMRAPEPERHEQT--IDKPLGAVRAQVH 412 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +NYI++QT DGLVIVDQHAAHERL++EK + + + +Q LL P I+ L + L+ Sbjct: 413 ENYIVAQTRDGLVIVDQHAAHERLVYEKFKVALTNGGVATQGLLIPAIVTLDPDDAELLC 472 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 ++L LG+ E FG A+A+RE PA+L +I L++D+ E+ T L+DR+E Sbjct: 473 TRADELAELGLVLESFGEGAVAVRETPALLGDTDIDGLVKDLAAELRADGTARALKDRLE 532 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + MAC+GS+RSGR++ EMN LLR+ME P S QCNHGRPT++ LKLSDIE+LFGR Sbjct: 533 AVASRMACHGSVRSGRRLTVEEMNALLRQMEATPYSGQCNHGRPTYVALKLSDIERLFGR 592 >gi|222147678|ref|YP_002548635.1| DNA mismatch repair protein [Agrobacterium vitis S4] gi|254766154|sp|B9JSD6|MUTL_AGRVS RecName: Full=DNA mismatch repair protein mutL gi|221734666|gb|ACM35629.1| DNA mismatch repair protein MutL [Agrobacterium vitis S4] Length = 617 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 295/618 (47%), Positives = 410/618 (66%), Gaps = 26/618 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++LSE +INQIAAGE+IERP+ A KELIEN++DA +SR+E AGGGK+ +ITDNG Sbjct: 1 MSIKQLSETLINQIAAGEVIERPASAAKELIENAIDAGASRIEIATAGGGKALLRITDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM +++ +AV+RHCTSK+++ +I + GFRGEALPSIG+V+ LT+ SR + + Q Sbjct: 61 CGMDGQDLALAVRRHCTSKLNESLMDIKSLGFRGEALPSIGSVARLTIASRRADSASAFQ 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 IA+ G K+ VRP NPGT+VEVRDLFF PARL FLK+E+ E IT++++RMAIA+P Sbjct: 121 IAVEGGKVGEVRPAPGNPGTVVEVRDLFFATPARLKFLKTERAEAAAITEMVKRMAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 K+ F S S+R + +T + RI+QV+G DF +NA+ L+ + ++ L G+ G+P Sbjct: 181 KIRFVLS--GSDRSTLELPATGDDHLARIAQVLGPDFRDNAIALDAEREDVHLGGFAGVP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGN+ Y F+NGR VQDK ILS IR AYAET+P GRYPV VL L +DP VDVNVH Sbjct: 239 TFNRGNSAHQYAFVNGRPVQDKLILSAIRGAYAETVPHGRYPVAVLALTVDPALVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAKS +RFR+P ++R I+ +I++++ ++G +S+ + M+ +F A Sbjct: 299 PAKSDVRFRDPGLVRGLIVGAIRQSLTREGDRSSTAGAGAMLRAFRPGANGGFSEGAQAA 358 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND-------------------PVEESEA 401 + + + + S + S + + + E A Sbjct: 359 ANNSYAPAYGARPPQPSAWSVDTSPHRPLDDGQNRFDGLALPAARADAHVSPSQISEPVA 418 Query: 402 THYQLGIA-----CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 + G AQ+H NYI++QT DGLVIVDQHAAHERL+FE MR+ + ++ SQ Sbjct: 419 MAMESGRFRLGAARAQVHANYIVAQTQDGLVIVDQHAAHERLVFEDMRKALSGRRLPSQG 478 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 LL PEII L E +C +M+H E+L RLG+ ERFGP AIA+RE PA+L + ++P L+R + Sbjct: 479 LLIPEIIGLPEEDCDRLMDHAENLDRLGLAIERFGPGAIAVRETPAMLGEVDVPGLVRQL 538 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 DEI + T +L R+E++ ATMAC+GS+RSGR ++ EMN LLR+ME+ P S QCNHG Sbjct: 539 ADEIAEWETAGSLFARLEHVAATMACHGSVRSGRLLRVEEMNALLRKMEETPGSGQCNHG 598 Query: 577 RPTFIKLKLSDIEKLFGR 594 RPT+I+LKLSDIE+LFGR Sbjct: 599 RPTYIELKLSDIERLFGR 616 >gi|146342898|ref|YP_001207946.1| DNA mismatch repair protein [Bradyrhizobium sp. ORS278] gi|166232077|sp|A4Z0Q5|MUTL_BRASO RecName: Full=DNA mismatch repair protein mutL gi|146195704|emb|CAL79731.1| DNA mismatch repair protein MutL [Bradyrhizobium sp. ORS278] Length = 613 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 234/612 (38%), Positives = 366/612 (59%), Gaps = 18/612 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E++IN+IAAGE++ERP+ +KEL+EN++DA +SR++ GGG+ ITD+G Sbjct: 1 MPVRQLPEQVINRIAAGEVVERPASVVKELVENAIDAGASRIDIFTDGGGRRKIAITDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT+ ++ +AV+RH TSK+ D D I T GFRGEALPSIG+V+ L++ +R Sbjct: 61 GGMTAADLALAVERHATSKLDDEDLLQIRTLGFRGEALPSIGSVARLSITTRHKSEPHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + S + P A+N GT VEV DLF PARL FLK+++ E I +V+RR+A+A Sbjct: 121 GITVDCGDKSQIVPAALNQGTRVEVADLFHATPARLKFLKTDRTEAEAIREVVRRLAMAR 180 Query: 180 PKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P ++FT + + R+ ++G DF ++A+ + + + + ++G+ Sbjct: 181 PDIAFTVAGEERAPVTWAAALPGAPGQLTRLGDILGTDFRSHAIAVRSERDHVAVEGFAA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P R NA Y+F+NGR V+DK IL +R AYA+ +P R+PVV L + +DPR+VD N Sbjct: 241 APALTRANALGQYLFVNGRPVRDKLILGAVRAAYADYLPRDRHPVVALFVTLDPREVDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP-- 356 VHPAK+ +RFRN ++R II ++++ + ++G T++ I++F P Sbjct: 301 VHPAKTEVRFRNAGLVRALIIHALKEGLAREGRRTAANDGGATIAAFRPAFTPPRPSAGP 360 Query: 357 ------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS--------EDNDPVEESEAT 402 + ++ + + +S+ + ++ + Sbjct: 361 MNWDWQRSPSAPIPRHDDVDSMPPAVSSAAFAEPMQAAFDVGGPRADLRLHEQPAAPDML 420 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 LG A QIH YI+SQT DGLVIVDQHAAHER+++E+++ + + Q LL P+I Sbjct: 421 DRPLGAARTQIHDTYIVSQTRDGLVIVDQHAAHERIVYERLKTSLAAHGVQRQILLIPDI 480 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 ++L E ++ ++L G+ E FGP A+A+RE P++L K N LLRD+ + + + Sbjct: 481 VELDEATVEALLARTDELAAFGLAVESFGPGAVAVRETPSLLGKINAAGLLRDLAEHMEE 540 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 L+ R+ ++ ATMAC+GS+R+GR+++ EMN LLR ME+ PNS QCNHGRPT+++ Sbjct: 541 WGEALPLERRLMHVAATMACHGSVRAGRRLKPEEMNALLRVMEETPNSGQCNHGRPTYVE 600 Query: 583 LKLSDIEKLFGR 594 LKL+D+EKLFGR Sbjct: 601 LKLADVEKLFGR 612 >gi|254462767|ref|ZP_05076183.1| DNA mismatch repair protein MutL [Rhodobacterales bacterium HTCC2083] gi|206679356|gb|EDZ43843.1| DNA mismatch repair protein MutL [Rhodobacteraceae bacterium HTCC2083] Length = 609 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 257/600 (42%), Positives = 390/600 (65%), Gaps = 14/600 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA + R+E A GGK+ ++ D+G G Sbjct: 15 IRQLDDAAINRIAAGEVVERPASAVKELVENAIDAGAHRIEVAYADGGKTLIRVVDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + +P+A+ RH TSKI D NIHTFGFRGEALPS+GAV LT++SR ++ +I Sbjct: 75 IIPQALPLALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLTIISRAVGHD-AFEI 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 A++G +S+V+P A++ GT+VE+RDLFF PARL F+++++ E+ ITDV++R+A+A P Sbjct: 134 AVNGGAMSAVKPAALSKGTVVELRDLFFATPARLKFMRTDRAESQAITDVVKRLAMAEPF 193 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQ 234 V FT + R + +G+ + R++ +IG +F +N++ + + + L Sbjct: 194 VGFTLRDVTGGGEGRVTFRADAESGDLFDALYGRLAGIIGREFADNSLRIEAEREGLHLT 253 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G+ +PT++RG+A Y+F+NGR V+DK + +R AY + + R+P L L+ DP+ Sbjct: 254 GFAALPTYSRGSAVTQYLFVNGRPVRDKLLYGALRGAYFDFLSRDRHPAAALFLDCDPQL 313 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAKS +RFR+P + R I+ +++ A+ + G S+ ++ + + + Sbjct: 314 VDVNVHPAKSEVRFRDPGLARGLIVSALRHALAEAGHRASTTVADATLGAMRPEQTGPAR 373 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 + + + + L+ + +S VEE A + LG A Q+H Sbjct: 374 VYQM-----DRPSQGALRASYQVQAPGFGETAGVFSRVEPLVEEPPAEQFPLGAARGQVH 428 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +NYII+QT DG+VIVDQHAAHERL++EK++ + +Q LL PEI++L + +CA +M Sbjct: 429 ENYIIAQTADGMVIVDQHAAHERLVYEKLKDQMAENGVAAQALLIPEIVELSDNDCARLM 488 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 E DL RLG+ ERFG AIA+RE PAIL + N +L DI+DE+ D + LQ +IE Sbjct: 489 EIATDLERLGLGIERFGGGAIAVRETPAILGEVNAKAMLLDILDELTDQGESIALQAKIE 548 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 IL+ +AC+GSIRSGR+M+ EMN LLREME P+S QCNHGRPT+++LKL+DIE+LFGR Sbjct: 549 AILSRVACHGSIRSGRRMRGEEMNALLREMEATPHSGQCNHGRPTYVELKLADIERLFGR 608 >gi|283856238|ref|YP_162089.2| DNA mismatch repair protein [Zymomonas mobilis subsp. mobilis ZM4] gi|283775233|gb|AAV88978.2| DNA mismatch repair protein MutL [Zymomonas mobilis subsp. mobilis ZM4] Length = 613 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 216/615 (35%), Positives = 363/615 (59%), Gaps = 24/615 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +IN+IAAGE++ERP+ A+KEL+EN++DA+S+R+ + GG ++ DNG Sbjct: 1 MSIRRLPEDVINRIAAGEVVERPASALKELVENAIDAQSTRILIRLLKGGLDGIEVIDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++E+ +A++RH TSK+ D+ + T GFRGEALPSI +V+ LTL SR +++G Sbjct: 61 IGIPADEMRLALERHATSKLPDNDAIEAVTTLGFRGEALPSIASVARLTLESRTADSDSG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I + + GT ++V LF IPAR F++S + E DV+RR+A+ Sbjct: 121 WKIIVDNGHFEKEGIAPLPKGTRIKVDSLFARIPARRKFMRSAKSEYMACHDVVRRLAMT 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P ++F+ + +N + R++ +I +N+V + + +++ L+G Sbjct: 181 RPDIAFSLEHDGRRIFSLN---GGESRQRRVAALIDRTLKDNSVAVEYQRDQMQLEGVAS 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+RG A+ Y+F+NGR V+D+ ++ ++R AY + + R+PV+ L L + VD+N Sbjct: 238 LPTFHRGLADHQYLFVNGRPVKDRLLIGSVRAAYHDLLAKDRHPVLALFLTLPNSDVDIN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN---APKTHL 355 VHPAK +RFR+ +R+ I+ +++++++ G ++ + + + + + AP + Sbjct: 298 VHPAKGEVRFRDSQAVRSLIVGALRESLDLSGFRSAQPADVQAMGKWQKSSELAAPSKAV 357 Query: 356 PKYATSLTNTQEKLFLQENRLST----------------NDLLPSDDPTYSEDNDPVEES 399 P + + + + L + + N + S Sbjct: 358 PSHESRQSLSDSGLLFKSRTIEAPKATSIPTPQGTASDLWSAATKSPLPPMGRNSATDSS 417 Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 E + + LG+A QI YII+++ DGLVIVDQHAAHERL+ E+MR+ + ++TSQ LL Sbjct: 418 EQSDFPLGLARGQIAATYIIAESKDGLVIVDQHAAHERLVMERMRRALQNGQVTSQRLLM 477 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P+++++ E C L + ++ +G++ ERFG AI +R PA+L + +++D+ E Sbjct: 478 PDVVEMDEVSCDLFEQRQDEFAAMGLETERFGHEAILVRATPAMLGNCEVKAMIKDLAAE 537 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 I + L+++ ++I+ATMAC+GS+R+GR + EMN LLREME P+S QCNHGRPT Sbjct: 538 IAAYDQSLLLKEKFDHIVATMACHGSVRAGRLLSIAEMNALLREMEITPHSGQCNHGRPT 597 Query: 580 FIKLKLSDIEKLFGR 594 ++KL DIEKLFGR Sbjct: 598 WVKLGHKDIEKLFGR 612 >gi|163867560|ref|YP_001608759.1| DNA mismatch repair protein [Bartonella tribocorum CIP 105476] gi|189030391|sp|A9IN82|MUTL_BART1 RecName: Full=DNA mismatch repair protein mutL gi|161017206|emb|CAK00764.1| DNA mismatch repair protein MutL [Bartonella tribocorum CIP 105476] Length = 617 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 268/616 (43%), Positives = 402/616 (65%), Gaps = 22/616 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ +KEL+EN++DA ++R+E + A GGK+F +++DNG Sbjct: 1 MIIRHLSENIINQIAAGEVIERPANVVKELVENAIDAGATRIEIITANGGKNFIKVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++++ +AV RHCTSKI+DD NI GFRGEALPSIG+V+ L L+SR + A+ Sbjct: 61 CGIPADQLTLAVSRHCTSKITDDVHNICFLGFRGEALPSIGSVAKLKLISRTKEAENAAE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I+++ KI +P A N GTIVEVRDLFF PARL F+K+++ ETN I+D+I+R+AIA+P Sbjct: 121 ISVTAGKIVGPKPAAANLGTIVEVRDLFFVTPARLKFMKTDRAETNAISDMIKRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ S + +++ N +RI+Q++G++F N++ L+ + + L G+ + Sbjct: 181 HIRFSLSGLDRTSMELSATENNTQGQLQRITQIMGKEFAPNSIALDAERESVRLTGFACL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNR N+ + ++NGR V+DKF+ IR AYA+ + RYPV +L +++ P +VDVNV Sbjct: 241 PSFNRNNSLHQFAYVNGRPVRDKFLWGAIRGAYADVMTRDRYPVAILFIDLPPAEVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ----------DN 349 HPAK+ +RFR+P +IR I+ +I++A+ + GI +S S+ M+++F + Sbjct: 301 HPAKADVRFRDPGLIRGLIVGAIREALQQSGIRPTSTRSEAMLAAFQTQKPLTQQSLGNF 360 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY-----------SEDNDPVEE 398 Y+ + + + STN ++ T + + Sbjct: 361 KNAHQSSSYSPQSHHFATASMVHKPLDSTNSFGLKENATPIMEGLNTPSGDAYIPSTIPS 420 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 SE Y LG A AQIH+NYII+QT D L+IVDQHAAHERL++E ++ + + SQ LL Sbjct: 421 SEELSYPLGAARAQIHKNYIIAQTQDSLIIVDQHAAHERLVYEALKNALYAKPLPSQLLL 480 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 PEI++L E + ++ H + L + G+ E FGP AI +RE P++L K N+ L++D+ D Sbjct: 481 IPEIVELSEEDATCLLTHKDALQKFGLGIEPFGPGAILVRETPSMLGKINVQALIKDLAD 540 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 E + TT L+ ++ + ATMAC+GSIRSGR ++ EMNRLLR+ME PN+S CNHGRP Sbjct: 541 EAAEYDTTNNLKAMLDYVAATMACHGSIRSGRLLRPEEMNRLLRQMEAIPNTSTCNHGRP 600 Query: 579 TFIKLKLSDIEKLFGR 594 T+I+LKL+DIE+LFGR Sbjct: 601 TYIELKLADIERLFGR 616 >gi|16124948|ref|NP_419512.1| DNA mismatch repair protein [Caulobacter crescentus CB15] gi|221233668|ref|YP_002516104.1| DNA mismatch repair protein [Caulobacter crescentus NA1000] gi|239977506|sp|B8H173|MUTL_CAUCN RecName: Full=DNA mismatch repair protein mutL gi|239977507|sp|P0CAV5|MUTL_CAUCR RecName: Full=DNA mismatch repair protein mutL gi|13421916|gb|AAK22680.1| DNA mismatch repair protein MutL [Caulobacter crescentus CB15] gi|220962840|gb|ACL94196.1| DNA mismatch repair protein mutL [Caulobacter crescentus NA1000] Length = 637 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 239/636 (37%), Positives = 372/636 (58%), Gaps = 42/636 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L + +N+IAAGE++ERP+ AIKEL++N++DA ++R+E GGG + + D+G Sbjct: 1 MPIRRLPPETVNRIAAGEVVERPASAIKELVDNAIDAGATRIEVEAHGGGLTRILVADDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD------FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ 114 G++ EE+P+A++RH TSK++ D IHT GFRGEALPSIG+V+ L + SR Sbjct: 61 CGLSPEELPVAIERHATSKLAPDADGLWDLLRIHTMGFRGEALPSIGSVARLQISSRAKG 120 Query: 115 NNTGAQIAISGEKISSVRPV--AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 I + G ++ V P G +EVRDLF+ PARL F+KSE+ E IT+ I Sbjct: 121 AKDAFSILVEGGQVGEVAPAAFPGPHGARIEVRDLFYATPARLKFMKSERAEALAITEEI 180 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNF-QSTNGNFPERISQVIGEDFINNAVELNEKSNEI 231 +R A+A V F+ ++ R++ V+G +F NA+E+++ + + Sbjct: 181 KRQAMANESVGFSLDIDGRRVLRLPPEHPGPQGRLARLAAVLGREFQENALEIDQTRDGV 240 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 L G+ G+PT+NRGNA Y+F+NGR V+D+ + +R AYA+ + R+P L + ++ Sbjct: 241 RLSGFAGLPTYNRGNAAHQYLFVNGRPVRDRLLQGALRAAYADFLARDRHPTAALYVTLE 300 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 +VDVNVHPAK+ +RFR+P ++R I+ +++ A+ G S+ ++ + + S +P Sbjct: 301 TTEVDVNVHPAKAEVRFRDPALVRGLIVGALRHALAGAGHRASTTVAAQALDSIRAQQSP 360 Query: 352 KT-HLPKYATSLTNTQEKLFLQENRLSTNDLLPS-------------------------- 384 + P+Y + + + Sbjct: 361 FPGYQPQYQPGPSPAGFSAWREGGWTPPTQRPMDLPGLNEVSARVEPSYGGDLAGVVREA 420 Query: 385 ------DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 +D ++ + Y LG A AQ+H+ YI++QT DG+VIVDQHAAHERL Sbjct: 421 YAAAAFEDRPPTDYPGATAPFDPVDYPLGAARAQVHETYIVAQTRDGMVIVDQHAAHERL 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 ++E+M+ + S +T QTLL PE++DL E ++ E+L LG+ E FGP A+ +R Sbjct: 481 VYERMKGEMASGGVTRQTLLLPEVVDLDPAEAERVVARAEELAGLGLVLESFGPGAVLVR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E PA+L K + L+RDI D++ ++ L++R+E + +TMAC+GS+R+GR++ EMN Sbjct: 541 ETPALLGKTDAAALVRDIADDLAENGQALALKERLEEVCSTMACHGSVRAGRRLNGAEMN 600 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LLREME P+S QCNHGRPT+++LKL+DIEKLFGR Sbjct: 601 ALLREMEATPHSGQCNHGRPTYVELKLADIEKLFGR 636 >gi|313201103|ref|YP_004039761.1| DNA mismatch repair protein mutl [Methylovorus sp. MP688] gi|312440419|gb|ADQ84525.1| DNA mismatch repair protein MutL [Methylovorus sp. MP688] Length = 624 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 210/623 (33%), Positives = 334/623 (53%), Gaps = 35/623 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ A+KEL+ENSLDA SS + + GG ++TD+G G Sbjct: 4 IKLLPDQLISQIAAGEVVERPASALKELLENSLDAGSSDIAVTLGQGGVKLLRVTDDGNG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A+ RH TSKI+ DD ++ + GFRGEAL SI ++S ++ SR + + + Sbjct: 64 IPHDDLTLALTRHATSKIASLDDLESVASLGFRGEALASIASISRTSITSRHAEASHAWR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 IA G + P A++ GTIVEV+D++F PAR FLK+EQ E + RR+A++ P Sbjct: 124 IAADGGLLGDAAPAALDRGTIVEVQDIYFNTPARRKFLKTEQTEFGHCEEAFRRIALSRP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F ++ G R ++V+G DF A EL+E + + L G P Sbjct: 184 DVGFMLQHNGRALMRL----APGEAKRRFTEVLGPDFSAEAFELDESAGGLRLWGMAAKP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TF+R + YV++NGR V+DK I IR AY + + R+P L LE+DP VDVNVH Sbjct: 240 TFSRSARDTQYVYVNGRFVRDKLISHAIRQAYQDVLHHDRHPAFALFLELDPTLVDVNVH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKK-----------GISTSSVLSKKMISSFHQDN 349 P+K+ +RFR + FI ++ KA+ ++ + I + Sbjct: 300 PSKTEVRFREGQAVHRFIFHALHKALATPVGLPANGLVPPPVAAPATSYSSGIPAGQPYP 359 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLS------------TNDLLPSDDPTYSEDNDPVE 397 + A + LF R + ++ L + + Sbjct: 360 RQQGSFDLRANEAPGFYQTLFGGLPREAVDTASSFVPSAISSADLQATLSPSQASSSLSP 419 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E A Y LG A AQ+H Y+++Q GL++VD HAAHER+++E+++ + + Q L Sbjct: 420 EQAAQEYPLGFALAQLHGVYVLAQNAQGLIVVDMHAAHERIMYERLKNALDGDSVPMQPL 479 Query: 458 LTPEIIDLLEGECALIMEH------DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 L P + E A + E + LH+LG + + P+ +A+R IPA+L + Sbjct: 480 LLPVSFNADRFEVATVQEQLSTPEGQQTLHQLGFEIVQLSPSTLAVRAIPAMLQDADAVA 539 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 L RD++ ++ + + L +R +LATMAC+ ++R+ R + EMN LLR+ME S Sbjct: 540 LARDVLRDLREYGGSRVLTERRNELLATMACHAAVRANRILSIQEMNALLRDMEATERSG 599 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+ + ++D++K+F R Sbjct: 600 QCNHGRPTWFQATMADLDKMFMR 622 >gi|241664014|ref|YP_002982374.1| DNA mismatch repair protein [Ralstonia pickettii 12D] gi|240866041|gb|ACS63702.1| DNA mismatch repair protein MutL [Ralstonia pickettii 12D] Length = 635 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 201/631 (31%), Positives = 331/631 (52%), Gaps = 45/631 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ +KEL+EN+LDA +++++ + GG ITDNG Sbjct: 10 PIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLQIKLEEGGVRRIAITDNGV 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++E+P+A+ RH TSKI ++ ++ T GFRGEAL SI +V+ LTL SR + Sbjct: 70 GIPADELPVALMRHATSKIGSLEELESVATLGFRGEALASIASVAELTLTSRTANDAHAT 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + +P + GT V+V+ L+F PAR FLK+EQ E +VIRR A+A Sbjct: 130 QI---IAQTGRAQPASGGVGTTVDVQHLYFNTPARRKFLKTEQTELGHCMEVIRRTALAR 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ + N + R + V+G +F + E + E+ L G+ G+ Sbjct: 187 PDVAISVHHNGKPLEHWNATQADS----RSAAVLGTEFARARLPFEESAGELRLFGFAGL 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RG A+ + ++NGR V+D+ + +R+AY + + R+P VL LE+ P VDVNV Sbjct: 243 PTASRGRADHQFFYVNGRFVRDRLLTHAVRSAYEDVLHGDRFPAYVLCLELPPEAVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS-----FHQDNAPKTH 354 HP+K +RFR+ + F+ ++Q+A+++ L + + +P + Sbjct: 303 HPSKIEVRFRDSRAVHQFVYHAVQRALSRHAGEQGDSLRTDIADAHDVAGVTTAPSPADN 362 Query: 355 LPKYATSLTNTQEKLFLQENRLST-----NDLLPSDDPTYSEDNDPVEESEATH------ 403 ++ + Q L + + R D P + D + Sbjct: 363 TTRWINQMAARQTSLGIAQPRAEYLSMMRGDSTPMPAMRPAWMTDVPSAATLFDGGTATA 422 Query: 404 --------------------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + LG A AQ+H Y+++Q T G+V+VD HAAHER+++E++ Sbjct: 423 QAAAAVAEPVAAPPADNDDAHPLGFAVAQLHGIYVLAQNTRGMVLVDMHAAHERILYEQL 482 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + + ++ Q LL P E E + L LG P +A+R +P + Sbjct: 483 KTALEARRVEVQPLLIPVTFAASPVEIGTAEEFRDTLTLLGFDISAVSPTTLAVRSVPTL 542 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 L K + L RD++ ++ + L +R +LAT+AC+ ++R+ R++ EMN LLR+ Sbjct: 543 LQKADAQALARDVLRDLHAYGGSRVLAERQNELLATLACHSAVRANRRLNLDEMNALLRQ 602 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ME + QCNHGRPT+I+L ++D+++LF R Sbjct: 603 MEATERADQCNHGRPTWIQLTVADLDRLFLR 633 >gi|254450749|ref|ZP_05064186.1| DNA mismatch repair protein MutL [Octadecabacter antarcticus 238] gi|198265155|gb|EDY89425.1| DNA mismatch repair protein MutL [Octadecabacter antarcticus 238] Length = 621 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 258/600 (43%), Positives = 394/600 (65%), Gaps = 16/600 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ +KELIEN+LDA +SRVE +A GGK+ ++TDNG G Sbjct: 29 IRQLDDAAINRIAAGEVVERPASVVKELIENALDARASRVEVFVADGGKTLIRVTDNGVG 88 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT++++P+A+ RH TSKI D NIH+FGFRGEALPS+GAV LT+ SR G +I Sbjct: 89 MTAQDLPLALSRHATSKIDGSDLLNIHSFGFRGEALPSLGAVGRLTIRSRTNGGE-GCEI 147 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++SG ++VRP A+ GTIVE+RDLF+ PARL FL++++ E I++V++R+A+A P Sbjct: 148 SVSGGAHTAVRPAALTAGTIVELRDLFYATPARLKFLRTDRAEMQAISEVVKRLAMAEPF 207 Query: 182 VSF--TFSTIKSNRYKMNFQSTNGNFPERISQ----VIGEDFINNAVELNEKSNEITLQG 235 V+F T + +R G+ + + V+G+DF NA+ ++ + + + L G Sbjct: 208 VTFVLTDVSGGKSRVTFRADGETGDMFDALHARLRGVLGKDFAENALAIDAQRDGVHLTG 267 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 + +PT++RG+A Q ++++NGR V+DK ++ +R AY +T+ R+P L ++++P +V Sbjct: 268 FAALPTYSRGSAVQQFLYVNGRPVRDKVLIGALRGAYMDTLSRDRHPAACLFIDVEPTRV 327 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA-PKTH 354 DVNVHPAKS +RFR+P I+R I+ +++ A+ + G SS ++ + + + + P+ + Sbjct: 328 DVNVHPAKSEVRFRDPAIVRGLIVSALRAALAQAGHRASSTVANETLGAMQPEQTEPRVY 387 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 T R S + D E +P + A + LG A AQ+H Sbjct: 388 QMDRPTGGIGPAY-------RPSGFADMAQDMSGRVEMIEPNDGPRAEEHPLGAARAQVH 440 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +NYII+QT G+VIVD HAAHERL++EK++ + +Q LL PEII++ + + A ++ Sbjct: 441 ENYIIAQTETGIVIVDGHAAHERLVYEKLKTQMAENGVAAQALLIPEIIEMSDDDAAQLL 500 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 ++L R G+ E FG AIA+RE PAIL + N +LRDI+DE+ D ++ +Q+++E Sbjct: 501 AVADELSRFGLTIEPFGGRAIAVRETPAILGEVNAEAMLRDILDELSDQGSSTLVQEKLE 560 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 IL+ +AC+GSIR+GR M+ EMN LLREME+ P S QCNHGRPT+++LKLSDIE+LFGR Sbjct: 561 AILSRIACHGSIRTGRSMRGEEMNALLREMERTPRSGQCNHGRPTYVELKLSDIERLFGR 620 >gi|149915456|ref|ZP_01903983.1| DNA mismatch repair protein [Roseobacter sp. AzwK-3b] gi|149810745|gb|EDM70586.1| DNA mismatch repair protein [Roseobacter sp. AzwK-3b] Length = 611 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 252/606 (41%), Positives = 385/606 (63%), Gaps = 17/606 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN+LDA + R++ A GGK+ ++TD+G G Sbjct: 8 IRQLDDAAINRIAAGEVVERPASAVKELVENALDAGARRIDVAYADGGKTLIRVTDDGCG 67 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + + +A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR + A+I Sbjct: 68 IAPDSLALALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLTITSRARGHE-AAEI 126 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 A+SG ++ V+P A+N GTIV +RDLF PARL F++S++ E I D++RR+A+A P Sbjct: 127 AVSGGQMGKVKPAALNGGTIVTLRDLFHATPARLKFMRSDRAEAQAIGDIVRRLAMAEPF 186 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPERIS----QVIGEDFINNAVELNEKSNEITLQ 234 V FT S R + G+ + + +++G DF +NA+ ++ + + + Sbjct: 187 VGFTLRDVSGGGEGRMVFRADAETGDMFDALHGRLGRILGSDFADNALRIDATRDGLRMT 246 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG+A Y+F+NGR V+D+ ++ +R AY + + R+P L +E DP Sbjct: 247 GYAALPTYSRGSAVAQYLFVNGRPVRDRMMIGALRAAYMDVLSRDRHPAAALFVECDPML 306 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAKS +RFR+P + R I+ ++ A+ + G SS ++ + + + P Sbjct: 307 VDVNVHPAKSEVRFRDPGLARGLIVSGLRHALAEAGHRASSTVAGATLGAMRPE--PAGP 364 Query: 355 LPKYATSLTNTQEKLFLQENRLS-TNDLLPSDDPTYSEDNDPVEESEATHYQL-----GI 408 Y + Q ++ + + ++ + +DP +E+ G Sbjct: 365 ARVYQMDRPSAQARVAAYQAQAPGFAEMAGAFSARVEPLSDPADETATDDVPPEALPLGA 424 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 A AQ+H+NYI++QTTDG+VIVD HAAHER+++EK+++ T + SQ LL PEI+++ Sbjct: 425 ARAQLHENYILAQTTDGIVIVDAHAAHERIVYEKLKRQMAETGVASQALLIPEIVEMSAE 484 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 + A ++E EDL RLG+ E FG A+A+RE PAIL + +L DI+DE+ D + + Sbjct: 485 DAASLLELAEDLARLGLVIEPFGGGAVAVRETPAILGACDARAMLLDILDELADQGDSGS 544 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 +Q RIE IL+ +AC+GS+RSGR++++ EMN LLREME P+S QCNHGRPT++ LKL+DI Sbjct: 545 VQARIEAILSRVACHGSVRSGRRLRAEEMNALLREMEATPHSGQCNHGRPTYVDLKLADI 604 Query: 589 EKLFGR 594 E+LFGR Sbjct: 605 ERLFGR 610 >gi|254502767|ref|ZP_05114918.1| DNA mismatch repair protein MutL [Labrenzia alexandrii DFL-11] gi|222438838|gb|EEE45517.1| DNA mismatch repair protein MutL [Labrenzia alexandrii DFL-11] Length = 631 Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 262/631 (41%), Positives = 396/631 (62%), Gaps = 38/631 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M++R+L E++INQIAAGE+IERP+ IKEL+EN++DA +S+++ V A GGK+ ++ D+G Sbjct: 1 MQVRQLGEQVINQIAAGEVIERPASVIKELVENAVDAGASQIDIVTAAGGKTLMRVADDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +++ +A++RHCTSKISDD +I T GFRGEALPSIG+V+ L + +R + + Sbjct: 61 AGMRQDDLKLAIRRHCTSKISDDDLFDIRTLGFRGEALPSIGSVARLVIQTRHGEEDHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 IA+ G K + P A + GT VEVRDLFF PARL FLKS++ E IT++++R+A+AY Sbjct: 121 AIAVEGGKEQPIVPAARSKGTQVEVRDLFFATPARLKFLKSDRAEAAAITEIVKRIALAY 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + F+ S + RI+Q++G DF++NA+E++ + L GY G+ Sbjct: 181 PHIGFSLSGADRQPQSWPAARGDEPHLARIAQILGPDFVDNAMEIDAAREGVRLTGYAGL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RGNA + F+NGR V+DK +LS +R AYA+ + R+PVVVL +++DP VDVNV Sbjct: 241 PTHHRGNAQHQFFFVNGRPVKDKLLLSGLRGAYADVLARDRHPVVVLFIDLDPALVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAKS +RFR+ ++R ++ +I+ A+ + G +S+ + + + + +P+ P A Sbjct: 301 HPAKSDVRFRDAQLVRGLLVGAIKHALVQAGHRSSTSNAAVALDALRKQ-SPQPGWPSGA 359 Query: 360 TSL--------------------TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE-- 397 T+ Q + N + + SE + Sbjct: 360 TAPAYGSAASVSASAHGFGATATAERWAPEAFQPLETAPNPVPGFAEDRVSEVQNGFSAL 419 Query: 398 --------------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 SE T LG A AQ+H+ YII+QT DG+VIVDQHAAHERL++E++ Sbjct: 420 ATPSADARAHDVPLASEKTELPLGAARAQVHETYIIAQTEDGVVIVDQHAAHERLVYERL 479 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 ++ + Q LL PE++DL E + A + + EDL ++G+ E FGP AIA+RE PAI Sbjct: 480 KEALAKKDVARQILLIPEVVDLPEEDAARLADRAEDLEKVGLSLEAFGPGAIAVRETPAI 539 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 L +I ++R + DE+ + T +L+++++++ ATMAC+GS+R+GR+M+ EM+ LLR+ Sbjct: 540 LGDMDIQGMVRTLADELAEWETADSLREKLDHVAATMACHGSVRAGRRMRPEEMDALLRD 599 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ME P S QCNHGRPT+++LKLSDIEKLFGR Sbjct: 600 MEATPLSGQCNHGRPTWVELKLSDIEKLFGR 630 >gi|73542454|ref|YP_296974.1| DNA mismatch repair protein [Ralstonia eutropha JMP134] gi|72119867|gb|AAZ62130.1| DNA mismatch repair protein MutL [Ralstonia eutropha JMP134] Length = 652 Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 207/646 (32%), Positives = 335/646 (51%), Gaps = 62/646 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ +KEL+EN+LDA +S++ + GG ITDNG Sbjct: 14 PIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGTSQLGIRLEEGGVRRIVITDNGC 73 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+P+A+ RH TSKI+ D+ + T GFRGEAL SI +VS L+L SR + Sbjct: 74 GIPPAELPVALMRHATSKIASLDELEAVLTLGFRGEALASIASVSQLSLTSRTASDAHAT 133 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q++ + +P + GT V+V+ L+F PAR FLKSEQ E +++RR+A+A Sbjct: 134 QVSADTGAM---QPASGGVGTTVDVQHLYFNTPARRKFLKSEQTELGHCLEMVRRVALAR 190 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ + N G+ R +QV+G DF + L+E++ ++ L G+ G+ Sbjct: 191 PDVAISVHHNGKPLEHWNA----GDVATRTAQVLGSDFARARLPLDEEAGDLHLYGFAGL 246 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RG +Q Y F+NGR V+DK + +R+AY + + R+P VL L++ P VDVNV Sbjct: 247 PTASRGRPDQQYFFVNGRFVRDKLLNHAVRSAYQDVLHGDRFPSYVLCLDLPPEMVDVNV 306 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS--------------------- 338 HP+K +RFR + F+ ++Q+ + ++ L Sbjct: 307 HPSKIEVRFRESRSVHQFVYHAVQRCLARQAGENGDSLHTGTDVEDVPAAGGAGELREPR 366 Query: 339 ------------------------------KKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 + + + P+ ++P + Sbjct: 367 APYGGTASSGSQWINYSAARQTELGIAQPRQAYLGMVREATMPRPYVPSSQPPAWLADAQ 426 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 + S D + D E +E + LG A AQ+H Y+++Q GLV+ Sbjct: 427 AARADEPPSLLDGVAPARMALPIAEDATEGAE--DHPLGYAIAQLHGIYVLAQNARGLVL 484 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 VD HAAHER+++E+++ ++ + Q LL P + E EH E L LG Sbjct: 485 VDMHAAHERILYEQIKDALDARDLAVQPLLLPVTLPANPVEIGTAEEHRETLELLGFDIA 544 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 P +A+R +PA+L + + L RD++ ++ + L +R +LAT+AC+ ++R+ Sbjct: 545 PVSPTTLAVRAVPALLQQADAEALARDVLRDLHSYGGSRVLAERRNELLATLACHSAVRA 604 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 RK+ EMN LLR+ME+ + QCNHGRPT+++L +S++++LF R Sbjct: 605 NRKLTLEEMNALLRQMEQTERADQCNHGRPTWVQLSVSELDRLFLR 650 >gi|150395653|ref|YP_001326120.1| DNA mismatch repair protein [Sinorhizobium medicae WSM419] gi|166232108|sp|A6U6K5|MUTL_SINMW RecName: Full=DNA mismatch repair protein mutL gi|150027168|gb|ABR59285.1| DNA mismatch repair protein MutL [Sinorhizobium medicae WSM419] Length = 605 Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 290/606 (47%), Positives = 408/606 (67%), Gaps = 14/606 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++LSE +INQIAAGE+IERP+ A KELIEN+LDA ++R+E AGGGK+ ++TDNG Sbjct: 1 MAIKQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEIATAGGGKTLLRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM+ ++ +A++RHCTSK+ ++I T GFRGEALPSIG+V+ L++ +R + GA Sbjct: 61 LGMSPADLELAIRRHCTSKLDGSLADIRTLGFRGEALPSIGSVARLSITTRTAEAREGAT 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I+G + VRP A GT+VEVR+LFF PARL F+KSE+ ET I++V+RRMAIA+P Sbjct: 121 ITITGGRSDPVRPSAAVVGTVVEVRELFFATPARLKFMKSERAETAAISEVVRRMAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 KV F S S+R + F +T + R++QV+G DF +NA+E++ + L G+ G+P Sbjct: 181 KVRFVLS--GSDRSALEFPATGDDRLARMAQVLGRDFRDNAIEIDAEREGARLTGFAGVP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGN+ Q Y F+NGR VQDK I+S IR AYAET+P GRYPV VL L IDP VDVNVH Sbjct: 239 TFNRGNSLQQYAFVNGRPVQDKLIMSAIRAAYAETVPQGRYPVAVLSLTIDPALVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA---------- 350 PAKS +RFR+P +IR II +I++A+ ++G ++ ++ ++ +F + Sbjct: 299 PAKSDVRFRDPGLIRGLIIGAIREALMREGDRAATTGAQGLMRAFRPEFHRGDQQRPQEP 358 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE--ESEATHYQLGI 408 Y + F + + + +D + D ++ + +A + LG Sbjct: 359 WTAATSPYRPFSPGGAARGFAETPQAAFSDFAQPSARNAAVPVDSIQAADGQAASFPLGA 418 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 A AQ+H+NYI++QT DGLVIVDQHAAHERL+FE MR ++ + +Q LL PEI+DL E Sbjct: 419 ARAQLHENYIVAQTDDGLVIVDQHAAHERLVFETMRTALHARPVPAQALLIPEIVDLPEE 478 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 +C ++ H + RLG+ ERFGP AIA+RE PA+L + + L+R + DE+ + T Sbjct: 479 DCDRLVAHAGEFTRLGLAIERFGPAAIAVRETPAMLGEMDAAGLVRQLADELAEWDTADG 538 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 L R+E + ATMAC+GS+RSGR++++ EMN LLR ME P S QCNHGRPT+I+LKL+DI Sbjct: 539 LAGRLEYLAATMACHGSVRSGRRLRTEEMNALLRRMEATPGSGQCNHGRPTYIELKLADI 598 Query: 589 EKLFGR 594 E+LFGR Sbjct: 599 ERLFGR 604 >gi|315122189|ref|YP_004062678.1| DNA mismatch repair protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495591|gb|ADR52190.1| DNA mismatch repair protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 600 Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 470/597 (78%), Positives = 526/597 (88%), Gaps = 4/597 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKIRKLSEKI+NQIAAGEIIERP+IAIKELIENSLDAES+ +ETVI+GGGKSFFQITDNG Sbjct: 5 MKIRKLSEKIVNQIAAGEIIERPAIAIKELIENSLDAESTCIETVISGGGKSFFQITDNG 64 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 FGMTSEEI MAVQRHCTSKI D+FSNI TFGFRGEALPSIGAV+HLTLMSR PQNNTGAQ Sbjct: 65 FGMTSEEIQMAVQRHCTSKIFDNFSNICTFGFRGEALPSIGAVAHLTLMSRSPQNNTGAQ 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQ+ETNLI +VIRRMAIAYP Sbjct: 125 ITISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQIETNLIANVIRRMAIAYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V FTFST K+NRY M+F+ST+GNFP+RISQVIGEDFINNAVE+NE S ITL+GY GIP Sbjct: 185 AVRFTFSTTKNNRYTMDFKSTDGNFPDRISQVIGEDFINNAVEINETSPNITLRGYAGIP 244 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNRGNANQ YVF+NGR +QDK ILSTIR AY+ETIPL RYPV+VLLLEI+P QVDVNVH Sbjct: 245 TFNRGNANQLYVFVNGRIIQDKLILSTIRIAYSETIPLRRYPVIVLLLEINPTQVDVNVH 304 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA- 359 PAKS +RFR+P+++RNFIIQSIQK+INKK TSS+LS KMISSFHQ+NA K Y Sbjct: 305 PAKSDVRFRDPSMVRNFIIQSIQKSINKKRNFTSSILSNKMISSFHQENAEKFRPITYEH 364 Query: 360 -TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 +++QEKL LQEN LST +LL +++ + +DN + ++ ++Y LG+ACAQIHQNYI Sbjct: 365 KAIPSHSQEKLVLQENNLSTKELLTTNNKYFMDDNS-INDTTTSNYPLGMACAQIHQNYI 423 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFN-STKITSQTLLTPEIIDLLEGECALIMEHD 477 ISQT D L+IVDQHAAHERLIFEKMRQDFN + KITSQTLL PEIIDLLEGECALI+EHD Sbjct: 424 ISQTYDELIIVDQHAAHERLIFEKMRQDFNINDKITSQTLLIPEIIDLLEGECALILEHD 483 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 EDL RLG+ ERFG NAIAIREIPAILSK N+ QLLRDI+DEII+++T L D+I+ IL Sbjct: 484 EDLRRLGVTVERFGLNAIAIREIPAILSKNNVSQLLRDIVDEIIENNTKNNLTDKIDKIL 543 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ATMACYGSIRSGRKM EMNRLLREME+N NSSQCNHGRPTFIKLKLSDIEKLFGR Sbjct: 544 ATMACYGSIRSGRKMHLTEMNRLLREMEQNNNSSQCNHGRPTFIKLKLSDIEKLFGR 600 >gi|163734247|ref|ZP_02141687.1| DNA mismatch repair protein [Roseobacter litoralis Och 149] gi|161392255|gb|EDQ16584.1| DNA mismatch repair protein [Roseobacter litoralis Och 149] Length = 610 Score = 550 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 250/600 (41%), Positives = 377/600 (62%), Gaps = 13/600 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E +N+IAAGE++ERP+ AIKEL+EN+LDA + ++ GGK+ ++ D+G G Sbjct: 15 IRQLDEGAVNRIAAGEVVERPASAIKELVENALDAGARKIAIDYGDGGKTLIRVQDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT+ ++P+A+ RH TSKI D NI TFGFRGEALPS+ AV LT+++R ++ G + Sbjct: 75 MTANDLPLALSRHATSKIDGSDLLNIQTFGFRGEALPSLAAVGRLTIVTRADGDD-GVEA 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++G ++P A NPGT V +RDLF+ PARL FL+S++ E I+DV++R+A+A P Sbjct: 134 TVAGGTEKPLKPAACNPGTTVTIRDLFYATPARLKFLRSDRAEAQAISDVVKRLAMAEPF 193 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNF----PERISQVIGEDFINNAVELNEKSNEITLQ 234 V F S R + G+ R+++V+G +F N++ ++ + + L Sbjct: 194 VQFVLRDVSGDGPGREVFRADAQQGDLFGALHGRLARVLGREFAENSLAIDAEREGLHLT 253 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G+ +PT++RG+A Y+F+NGR V+DK ++ +R AY++ + R+P L L+ DP+ Sbjct: 254 GFAALPTYSRGSAVAQYLFVNGRPVKDKLLVGALRGAYSDFLSRDRHPAAALFLDCDPKL 313 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAKS +RFR+P I R I+ +++ A+ + G S+ +S + + + Sbjct: 314 VDVNVHPAKSEVRFRDPGIARGLIVSALRHALAEAGHRASTTVSTATLGAMQPEPIGARV 373 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 S + L + ++ D D E Y LG A Q+H Sbjct: 374 YQMDHASRPMSAPPL----QTPAFQEVAAPWGRVAETDPDGETADEPVDYPLGAARGQVH 429 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +NYII+QT G+VIVDQHAAHERL++EK+++ + SQ LL PEI++L +CA +M Sbjct: 430 ENYIIAQTATGMVIVDQHAAHERLVYEKLKRQMAENGVASQALLIPEIVELSAADCASLM 489 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 +DL +LG+ E FG +AIA+RE PAIL + L+ DI+DE+ D +T+ ++ RI+ Sbjct: 490 HVADDLAQLGLVVEPFGGDAIAVRETPAILGLVDARALILDILDELADQNTSDNIRQRID 549 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 IL+ +AC+GSIRSGR M++ EMN LLR+ME P+S QCNHGRPT+++LKLSDIE+LFGR Sbjct: 550 AILSRVACHGSIRSGRWMKTEEMNALLRDMEATPHSGQCNHGRPTYVELKLSDIERLFGR 609 >gi|239833562|ref|ZP_04681890.1| DNA mismatch repair protein MutL [Ochrobactrum intermedium LMG 3301] gi|239821625|gb|EEQ93194.1| DNA mismatch repair protein MutL [Ochrobactrum intermedium LMG 3301] Length = 626 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 275/625 (44%), Positives = 391/625 (62%), Gaps = 31/625 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ IKEL+EN++DA ++R+E V GGGK+ ++TDNG Sbjct: 1 MPIRHLSETIINQIAAGEVIERPASVIKELVENAIDAGATRIEVVTGGGGKTLLRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ +E+P+AV RHCTSK+SDD +I GFRGEALPSIG+V+ L L SRP ++G + Sbjct: 61 SGIPVDELPLAVSRHCTSKLSDDVHDIRALGFRGEALPSIGSVAKLVLKSRPQDADSGFE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 +++SG + RP A+N GTI EVRDLF+ PARL F+K+++ E + ITDVI+R+AIA+P Sbjct: 121 VSVSGGHLDGPRPSALNRGTIAEVRDLFYATPARLKFMKTDRAEASAITDVIKRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ + ++ S ERI+QV+G++F NA+ ++ + + + L G+ GI Sbjct: 181 HIRFSLAGSDRTPLELAATGSGAEATLERINQVLGKEFGENALAIDAERDGVRLAGFVGI 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ NRGNA + ++NGR V+DK + +R AYA+ + R+PV VL L +DP VDVNV Sbjct: 241 PSHNRGNALHQFAYVNGRPVRDKQLFGALRGAYADVMARDRHPVAVLFLTLDPALVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK------- 352 HPAK+ +RFR+P ++R I+ +I++A+ + GI ++ + M+ +F + Sbjct: 301 HPAKADVRFRDPGLVRGLIVGAIKQALAQSGIRPATSGADAMLQAFRAEGLQPSPSSFAS 360 Query: 353 --------THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND---------- 394 + + A T+ D S SE Sbjct: 361 RSSSTGYASGGWRPAPPAPRTEWSPQTAHPAHRPLDFATSPSFQESEQATLAAVNVLAAD 420 Query: 395 -----PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 +E LG A AQIH NYI+SQT D LVIVDQHAAHERL++E ++ +S Sbjct: 421 ARATVHEAPAELQQKPLGAARAQIHANYIVSQTEDSLVIVDQHAAHERLVYEALKNALHS 480 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 I Q LL PEI+DL E + + H E L R G+ E+FGP AI +RE PA+L + N+ Sbjct: 481 RPIPGQMLLIPEIVDLPEEDAERLATHAETLARFGLGIEQFGPGAIVVRETPAMLGEMNV 540 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 QL+RD+ DEI + T+ L+ + ++ ATMAC+GS+RSGR+++ EMN LLREME P Sbjct: 541 QQLIRDLSDEIAEHDTSDGLKAMLNHVAATMACHGSVRSGRRLKPEEMNALLREMESTPG 600 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S CNHGRPT+I+LKL+DIE+LFGR Sbjct: 601 SGTCNHGRPTYIELKLTDIERLFGR 625 >gi|307292927|ref|ZP_07572773.1| DNA mismatch repair protein MutL [Sphingobium chlorophenolicum L-1] gi|306880993|gb|EFN12209.1| DNA mismatch repair protein MutL [Sphingobium chlorophenolicum L-1] Length = 590 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 223/595 (37%), Positives = 352/595 (59%), Gaps = 7/595 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E ++N+IAAGE++ERP+ A+KE++EN++DA S R+ IA GG +++D+G Sbjct: 1 MSIRRLPEHLVNRIAAGEVVERPASALKEIVENAVDAGSRRIAIRIANGGLDRIEVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM S EI +A++RH TSK+ DD N+ T GFRGEALPSI +V+ L++ SRP ++ G Sbjct: 61 CGMDSSEIALALERHATSKLPDDAIENVATLGFRGEALPSIASVARLSIDSRPAGSD-GW 119 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + + P A+ PGT V V LF +PAR FL+S + E DV+RR+A+A+ Sbjct: 120 NRTVDNGVVVNEGPAALPPGTRVIVEQLFGKVPARRKFLRSAKAEYAACLDVVRRLAMAH 179 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ + + ++ + +N V + + + L G + Sbjct: 180 PAIAFSMEHDGRRVLGVQADEAREDR---VAALTDRALADNHVIVALEREGVRLSGVASL 236 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT+NRG + ++F+NGR V+D+ ++ +R AYA+ + R+PVV L L++ P +VDVNV Sbjct: 237 PTYNRGVGDHQFLFVNGRPVRDRLLVGAVRGAYADMLARDRHPVVALFLDVPPLEVDVNV 296 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ +RFR+P +IR I+ +++A++ +G +S++ + P + P A Sbjct: 297 HPAKTEVRFRDPALIRGMIVSGLRRALDAEGFRAVQHADPAGLSAWRPE--PVSPTPIGA 354 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + + + P + E T + LG+A Q+ + YI+ Sbjct: 355 MPIFEAAGAPVPAYSVAERRPTFLTPPPQARAEPAAAPAPEGTSFPLGVARGQVARTYIV 414 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ DGLVIVDQHAAHERL E+MR+ + +Q LL PE+++L E C + + Sbjct: 415 AEAEDGLVIVDQHAAHERLTLERMRRAMEGQGVAAQALLLPEVVELDEPACDRLEARIAE 474 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L G++ ERFGP A+ +R PA+L + ++ L+ D+ D++ + +L++R++ + AT Sbjct: 475 LKDFGLELERFGPAAMLVRATPAMLGQGDVQGLVSDLADDLAAYDSALSLKERLDLVAAT 534 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MAC+GS+R+GR + EMN LLREME P S QCNHGRPT++KL DIEKLFGR Sbjct: 535 MACHGSVRAGRILSVAEMNALLREMEITPRSGQCNHGRPTWVKLGHGDIEKLFGR 589 >gi|260753121|ref|YP_003226014.1| DNA mismatch repair protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552484|gb|ACV75430.1| DNA mismatch repair protein MutL [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 613 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 215/615 (34%), Positives = 363/615 (59%), Gaps = 24/615 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +IN+IAAGE++ERP+ A+KEL+EN++DA+S+R+ + GG ++ DNG Sbjct: 1 MSIRRLPEDVINRIAAGEVVERPASALKELVENAIDAQSTRILIRLLKGGLDGIEVIDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++E+ +A++RH TSK+ D+ + T GFRGEALPSI +V+ LTL SR +++G Sbjct: 61 IGIPADEMRLALERHATSKLPDNDAIEAVTTLGFRGEALPSIASVARLTLESRTADSDSG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I + + GT ++V LF IPAR F++S + E D++RR+A+ Sbjct: 121 WKIIVDNGHFEKEGIAPLPKGTRIKVDSLFARIPARRKFMRSAKSEYMACHDIVRRLAMT 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P ++F+ + +N + R++ +I +N+V + + +++ L+G Sbjct: 181 RPDIAFSLEHDGRRIFSLN---GGESRQRRVAALIDRTLKDNSVAVEYQRDQMQLEGVAS 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+RG A+ Y+F+NGR V+D+ ++ ++R AY + + R+PV+ L L + VD+N Sbjct: 238 LPTFHRGLADHQYLFVNGRPVKDRLLIGSVRAAYHDLLAKDRHPVLALFLTLPNSDVDIN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN---APKTHL 355 VHPAK +RFR+ +R+ I+ +++++++ G ++ + + + + + AP + Sbjct: 298 VHPAKGEVRFRDSQAVRSLIVGALRESLDLSGFKSAQPADVQAMGKWQKSSELAAPSKAV 357 Query: 356 PKYATSLTNTQEKLFLQENRLST----------------NDLLPSDDPTYSEDNDPVEES 399 P + + + + L + + N + S Sbjct: 358 PSHESRQSLSDSGLLFKSRTIEAPKSTSIPTPQGTASDLWSAATKSPLPPMGRNSATDSS 417 Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 E + + LG+A QI YII+++ DGLVIVDQHAAHERL+ E+MR+ + ++TSQ LL Sbjct: 418 EQSDFPLGLARGQIAATYIIAESKDGLVIVDQHAAHERLVMERMRRALQNGQVTSQRLLM 477 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P+++++ E C L + ++ +G++ ERFG AI +R PA+L + +++D+ E Sbjct: 478 PDVVEMDEVSCDLFEQRQDEFAAMGLETERFGHEAILVRATPAMLGNCEVKAMIKDLAAE 537 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 I + L+++ ++I+ATMAC+GS+R+GR + EMN LLREME P+S QCNHGRPT Sbjct: 538 IAAYDQSLLLKEKFDHIVATMACHGSVRAGRLLSIAEMNALLREMEITPHSGQCNHGRPT 597 Query: 580 FIKLKLSDIEKLFGR 594 ++KL DIEKLFGR Sbjct: 598 WVKLGHKDIEKLFGR 612 >gi|86139358|ref|ZP_01057927.1| DNA mismatch repair protein [Roseobacter sp. MED193] gi|85823861|gb|EAQ44067.1| DNA mismatch repair protein [Roseobacter sp. MED193] Length = 645 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 257/631 (40%), Positives = 384/631 (60%), Gaps = 39/631 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA + R+ IA GGK+ ++TD+G Sbjct: 15 TIRQLDDSAINRIAAGEVVERPASAVKELVENAIDAGAHRITIEIADGGKTLIRVTDDGC 74 Query: 62 GMTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GMTS ++P+A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR ++ AQ Sbjct: 75 GMTSRDLPLALSRHATSKIDGTDLLNIHTFGFRGEALPSLGAVGRLTITSRAAGHD-AAQ 133 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++G K+ VRP A+ GTIVE+ DLF+ PARL F+++++ E+ I DV++R+A+A P Sbjct: 134 IRVAGGKMEPVRPAALRAGTIVELADLFYATPARLKFMRTDRAESQAIGDVVKRLAMAEP 193 Query: 181 KVSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITL 233 V FT S R G+ + R++ V+G +F NA++++ I L Sbjct: 194 SVGFTLRDVSGGGEGRVTFRADPLTGDLFDALHGRLASVLGREFAENALKIDATREGIRL 253 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 GY +PT++RG A ++F+N R V+DK + +R AY + + R+P L ++ DP Sbjct: 254 FGYAALPTYSRGAAVAQFLFVNSRPVKDKMLTGALRGAYFDFLSRDRHPAAALFIDCDPT 313 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 VDVNVHPAKS +RFR+P + R I+ +++ A+ + G S+ ++ + + + Sbjct: 314 LVDVNVHPAKSEVRFRDPGLARGLIVSALRHALAEAGHRASTTVAGATLGAMRPEAPTAN 373 Query: 354 HLP---------------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 YA +++ + + DP+ + Sbjct: 374 GAARVYQMDRPSLGARNLSYAAQAPGQPQEMSVPAPPAAAPGFAEFQHEYSGRLTDPLAD 433 Query: 399 SEAT---------------HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 +EA H LG A Q+H+NYII+QT DG+VIVDQHAAHERL++EK+ Sbjct: 434 TEAPGQMSDAPEPTAPGAEHLPLGAARGQVHENYIIAQTADGMVIVDQHAAHERLVYEKL 493 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 +Q + +Q LL PEI++L +CA I+ E+L + G+ E FG NA+A+RE PAI Sbjct: 494 KQQMAENGVAAQALLIPEIVELGSNDCARILAQAEELKKFGLGLEAFGGNAVAVRETPAI 553 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 L + N +++DI+DE+ D + +Q R+E IL+ +AC+GS+RSGR+M+ EMN LLRE Sbjct: 554 LGEVNAEAMVKDILDELDDQGESQLVQARLEAILSRVACHGSVRSGRRMRGEEMNALLRE 613 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ME P+S QCNHGRPT+++LKL+DIE+LFGR Sbjct: 614 MEATPHSGQCNHGRPTYVELKLADIERLFGR 644 >gi|302878544|ref|YP_003847108.1| DNA mismatch repair protein MutL [Gallionella capsiferriformans ES-2] gi|302581333|gb|ADL55344.1| DNA mismatch repair protein MutL [Gallionella capsiferriformans ES-2] Length = 629 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 212/627 (33%), Positives = 335/627 (53%), Gaps = 33/627 (5%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 M IR L E +INQIAAGE+IERP+ A+KEL+ENSLDA ++ + + GG +I D Sbjct: 1 MPSYIRVLPELLINQIAAGEVIERPAAALKELLENSLDAGATDITVQLDNGGIKLLRIRD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG G+ +E+ +A+ RH TSKI+ DD ++ + GFRGEAL S+ AV+ LTL SR + Sbjct: 61 NGRGIVRDELALALMRHATSKIASLDDLQSVESMGFRGEALASMAAVAQLTLSSRTAHDT 120 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G + +IS P + PGT +E+R+L+F PAR FLKSE E + +R+A Sbjct: 121 HGWMVEAIDGRISEAAPASHPPGTTIELRELYFNTPARRKFLKSEATEFAHCEEAFKRIA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNF---------------PERISQVIGEDFINNA 221 ++ P V F+ +++N + +R++ ++G +F N A Sbjct: 181 LSRPDVGFSLQHNGRTVWQLNPGLRIEDRGLRGEDDGGWMQNAALKRVAALLGAEFGNAA 240 Query: 222 VELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY 281 V ++ + +TL G +P ++RGN + Y F+NGR V+DK +R AY + + R+ Sbjct: 241 VPVSGSAANLTLHGLAALPAYSRGNRDAQYFFVNGRFVRDKVASHALRQAYQDILHHQRH 300 Query: 282 PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM 341 P VL LE+ QVDVNVHPAKS +RFR I FI ++Q+A+ +S ++ + + Sbjct: 301 PAFVLFLELPAEQVDVNVHPAKSEVRFREGQGIHQFIFHTLQQALAAPALSGAATQERAI 360 Query: 342 ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE- 400 + + + + + + + + + + S P E S Sbjct: 361 QAPIPTQQRIPLAAAQLNATYQVWEAQTGSGKWGVKSGEAASGEWKVESGQTAPAESSSL 420 Query: 401 -------------ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 +T + LG A AQ+ YI++Q GL++VD HAAHER+++EK++ Sbjct: 421 PAIQSPTTSHYPLSTDHPLGFALAQLSGVYILAQNEQGLIVVDMHAAHERIVYEKLKASM 480 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + I +Q LL P + A + + LH+LG + P IAIR +P +L + Sbjct: 481 DHEAIATQPLLIPVCFQTDAHDVATVEAEQDALHKLGFDIKPLSPTQIAIRAMPVLLKQA 540 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 RDI++E+ + L +R +LA++AC+G++R+ R + EMN LLREME+ Sbjct: 541 EAEAAARDILNELRKYGGSRMLTERRNELLASLACHGAVRANRILSVPEMNALLREMEQT 600 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ L +++++K+F R Sbjct: 601 ERSGQCNHGRPTWFALTMNELDKMFMR 627 >gi|110678039|ref|YP_681046.1| DNA mismatch repair protein [Roseobacter denitrificans OCh 114] gi|109454155|gb|ABG30360.1| DNA mismatch repair protein, putative [Roseobacter denitrificans OCh 114] Length = 610 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 251/601 (41%), Positives = 377/601 (62%), Gaps = 15/601 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E +N+IAAGE++ERP+ AIKEL+EN+LDA + ++ GGK+ ++ D+G G Sbjct: 15 IRQLDEGAVNRIAAGEVVERPASAIKELVENALDASARKIAIDYGDGGKTLIRVQDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT+ ++P+A+ RH TSKI D NI TFGFRGEALPS+ AV LT+++R ++ G + Sbjct: 75 MTATDLPLALSRHATSKIDGSDLLNIQTFGFRGEALPSLAAVGRLTIVTRAGGDD-GVEA 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++SG ++P A NPGT V +RDLF+ PARL FL+S++ E I DV++R+A+A P Sbjct: 134 SVSGGDEKPLKPAACNPGTTVTIRDLFYATPARLKFLRSDRAEAQAIIDVVKRLAMAEPF 193 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNF----PERISQVIGEDFINNAVELNEKSNEITLQ 234 V F S R + G+ R+++V+G +F NA+ ++ + + L Sbjct: 194 VQFVLRDVSGDGPGREVFRADAQQGDLFGALHGRLARVLGREFAENALAIDAEREGLHLT 253 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G+ +PT++RG+A Y F+NGR V+DK ++ +R AY++ + R+P L L+ DP+ Sbjct: 254 GFAALPTYSRGSAVAQYFFVNGRPVKDKLLVGALRGAYSDFLSRDRHPAAALFLDCDPKL 313 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKT 353 VDVNVHPAKS +RFR+P I R I+ +++ A+ + G S+ +S + + + + Sbjct: 314 VDVNVHPAKSEVRFRDPGIARGLIVSALRHALAEAGHRASTTVSTATLGAMQPEPIGARV 373 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 + A+ + + ++ D D + Y LG A Q+ Sbjct: 374 YQMDQASRPVSAPPP-----QTPAFQEVAAPWGRVAETDPDEQTAGDPGDYPLGAARGQV 428 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H+NYII+QT G+VIVDQHAAHERL++EK+++ + SQ LL PEI++L +CA + Sbjct: 429 HENYIIAQTATGMVIVDQHAAHERLVYEKLKRQMAENGVASQALLIPEIVELSAADCASL 488 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 M+ +DL RLG E FG +AIA+RE PAIL + L+ DI+DE+ D + + ++ RI Sbjct: 489 MQISDDLARLGFVVEPFGGDAIAVRETPAILGVVDARALILDILDELADQNASENIRMRI 548 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + IL+ +AC+GSIRSGR M++ EMN LLREME P+S QCNHGRPT+++LKLSDIE+LFG Sbjct: 549 DAILSRVACHGSIRSGRWMKTEEMNALLREMEATPHSGQCNHGRPTYVELKLSDIERLFG 608 Query: 594 R 594 R Sbjct: 609 R 609 >gi|118590698|ref|ZP_01548099.1| DNA mismatch repair protein [Stappia aggregata IAM 12614] gi|118436674|gb|EAV43314.1| DNA mismatch repair protein [Stappia aggregata IAM 12614] Length = 630 Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 262/633 (41%), Positives = 393/633 (62%), Gaps = 43/633 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MK+R+L E++INQIAAGE+IERP+ IKELIEN++DA + +VE V A GGK+ ++ D+G Sbjct: 1 MKVRQLGEQVINQIAAGEVIERPASVIKELIENAVDAGAKQVEIVTAAGGKTLMRVADDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E++ +A++RHCTSKISDD +I T GFRGEALPSIG+V+ L + +R + Sbjct: 61 EGMRREDLQLAIRRHCTSKISDDDLFDIRTLGFRGEALPSIGSVARLAIQTRHKDEDHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 IA+ G + + P A GT VEVRDLFF PARL FLKS++ E IT++++R+A+AY Sbjct: 121 AIAVEGGREQPLVPAARTKGTQVEVRDLFFATPARLKFLKSDRAEAAAITEIVKRIALAY 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ F+ + RI+Q++G+DF++NA+E++ + L G+ G+ Sbjct: 181 PEIGFSLGGADRQSQSWPAARGSEPHLARIAQILGQDFVDNAMEIDAAREGVRLTGFAGL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RGNA + F+NGR V+DK +LS +R AYA+ + R+PVVVL +++DP VDVNV Sbjct: 241 PTHHRGNAQNQFFFVNGRPVKDKLLLSGLRGAYADVLARDRHPVVVLFIDLDPTLVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA------PKT 353 HPAK+ +RFR+ ++R ++ +I+ A+ + G +S+ + + + +A P Sbjct: 301 HPAKADVRFRDSQLVRGLLVGAIKHALVQSGHRSSTSNAAVALDAIRAQSAGFAQPGPTP 360 Query: 354 HLPK--------------------------------YATSLTNTQEKLFLQENRLSTNDL 381 P AT + F ++N + Sbjct: 361 SAPAGSGGYGGGSYTRTSAAPHWAPDAFSPLQMESTPATGFAEAPQPAFERQNGFADFAR 420 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 +D ND E+E T LG A AQ+H+ YII+QT DG+VIVDQHAAHERL++E Sbjct: 421 PSADARA----NDVPVETEKTRLPLGAARAQVHETYIIAQTEDGVVIVDQHAAHERLVYE 476 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 ++++ + Q LL PEI++L E + + + EDL ++G+ E FGP AIA+RE P Sbjct: 477 RLKEALARKDVARQILLIPEIVELPEEDAIRLADRAEDLEKVGLSLEAFGPGAIAVRETP 536 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 AIL +I ++R++ DE+ + T L+++++++ ATMAC+GS+R+GR+M+ EM+ LL Sbjct: 537 AILGDMDIQGMVRNLADELAEWDTAEGLKEKLDHVAATMACHGSVRAGRRMRPEEMDALL 596 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R+ME P S QCNHGRPT+++LKL DIEKLFGR Sbjct: 597 RDMEATPLSGQCNHGRPTWVELKLGDIEKLFGR 629 >gi|325266000|ref|ZP_08132686.1| DNA mismatch repair protein MutL [Kingella denitrificans ATCC 33394] gi|324982638|gb|EGC18264.1| DNA mismatch repair protein MutL [Kingella denitrificans ATCC 33394] Length = 623 Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 214/624 (34%), Positives = 336/624 (53%), Gaps = 36/624 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENSLDA ++ + +AGGG ++TDNG Sbjct: 3 RIHALPDHLVNQIAAGEVVERPAAALKEIVENSLDAGATHISVELAGGGIKLIRVTDNGN 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++P+A+ RH TSKI D ++ + GFRGE L SI +VS LTL SR Sbjct: 63 GIHADDLPLALSRHATSKIKQLHDLEHVRSMGFRGEGLASIASVSRLTLTSRTADLPHAH 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I +S+V A GT VEVR+LFF PAR FLKSE E ++ R+A+A Sbjct: 123 EIRAEDGVLSAVNAAAHPEGTTVEVRELFFNTPARRKFLKSENTEYAHCAAMLERLALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+ +F+ + ++ QS ER++ V+G +F + ++ ++ + + G+ Sbjct: 183 PQAAFSLAHNGKTVFRYPVQS----LEERMAAVMGAEFQSASLPVDSGEGAVRVHGFVSK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G + + F+N R V+DK +L ++ AY + + P L LE+ P VDVNV Sbjct: 239 PTFAKGKSELQFCFVNRRFVRDKVVLHAVKQAYRDVLHHKITPAFALFLEMPPEMVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAI------------------NKKGISTSSVLSKKM 341 HP K+ IRFR+ + + ++ KA+ ++ + S L + Sbjct: 299 HPTKTEIRFRDSQAVHRLVFHTLDKALEGTRADMTGSVGNAGDILQQRFPNVQSSLHTET 358 Query: 342 ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTND-----------LLPSDDPTYS 390 + AP P Y+ Q L L+ENR + + T Sbjct: 359 AAMPTSGEAPSAPAP-YSAYRAPQQRSLSLKENRAALQTYAELYRRDDDFPIEKAACTPK 417 Query: 391 EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 + E +E Y LG A AQ+ YI++QT +GL++VD HAA ER+ +EKM+ Sbjct: 418 QPAPEAEAAEPPEYPLGFALAQLLGIYILAQTAEGLILVDMHAAAERVNYEKMKAQRQQG 477 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 + +Q LL P + E A++ EH E L G+ G IA+R +PA+L K + Sbjct: 478 SLQTQMLLIPPVFAASHTERAVLAEHGETLREYGLLLSDEGNGQIAVRSVPAMLGKADAV 537 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 L ++++ E+ ++ T++ I ATMAC+GS+R+GR++ EMN LLR+ME S Sbjct: 538 ALAQNVLRELGSVGSSQTVESMENRIFATMACHGSVRAGRQLTLPEMNALLRDMENTSRS 597 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 +QCNHGRPT++ L L+D++ LF R Sbjct: 598 NQCNHGRPTWVHLALADLDALFLR 621 >gi|49473918|ref|YP_031960.1| DNA mismatch repair protein [Bartonella quintana str. Toulouse] gi|81827643|sp|Q6G0J4|MUTL_BARQU RecName: Full=DNA mismatch repair protein mutL gi|49239421|emb|CAF25760.1| DNA mismatch repair protein mutL [Bartonella quintana str. Toulouse] Length = 612 Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 269/611 (44%), Positives = 396/611 (64%), Gaps = 17/611 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ +KEL+EN++DA ++R+E V A GGKSF +++DNG Sbjct: 1 MIIRHLSENIINQIAAGEVIERPANVVKELVENAIDAGATRIEIVTANGGKSFIKVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++++ +A+ RHCTSKI+DD NI+ GFRGEALPSIG+V+ L L SR + + Sbjct: 61 CGIPADQLTLAISRHCTSKITDDVHNIYFLGFRGEALPSIGSVAKLKLTSRTQEAENATE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ KI +P A NPGTIVEVRDLFF PARL F+K+++ ETN I+D+I+R+AIA+P Sbjct: 121 IIVTAGKIIGPKPAAANPGTIVEVRDLFFVTPARLKFMKTDRAETNAISDMIKRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQS-TNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ S + ++ + + +RI+Q++G++F N++ LN K I L G+ + Sbjct: 181 HIRFSLSGLDRTSMELPATANSTQGQLQRITQIMGKEFAPNSIALNAKRESIRLTGFACL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNR N+ + ++N R V+DKF+ TIR AYA+ + RYPV +L +++ P VDVNV Sbjct: 241 PSFNRSNSLHQFAYVNRRPVRDKFLWGTIRGAYADVMARDRYPVSILFIDLPPADVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ +RFR+P +IR I+ +I +A+++ G+ +S S+ M+S+F T + Sbjct: 301 HPTKADVRFRDPGLIRGLIVGAIHEALHQIGVRPASTCSEAMLSAFQTSQPLGTFKSTHQ 360 Query: 360 TS------LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV----------EESEATH 403 T L + + + L + E D SE H Sbjct: 361 TFSSQHHHLASAAASPLHKPLDATNFVNLREEAVPLMECLDMPSGDICTANTTPSSEELH 420 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 Y LG A AQIH+NYII+QT D L+IVDQHAAHERL++E ++ S + SQ LL PEI+ Sbjct: 421 YPLGAARAQIHKNYIIAQTQDSLIIVDQHAAHERLVYEALKDALYSKPLPSQLLLIPEIV 480 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 +L E + ++ H + L + G+ E FGP AI +RE P++L + N+ L++D+ DE + Sbjct: 481 ELSEEDATCLLTHKDALQKFGLGIESFGPGAIVVRETPSMLGEVNVQALIKDLADEAAEY 540 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 TT L+ I+ + ATMAC+GSIRSGR +++ EMN LLR++E P++ CNHGRPT+I+L Sbjct: 541 DTTNNLKAMIDCVAATMACHGSIRSGRLLRAEEMNALLRQIEATPHTGTCNHGRPTYIEL 600 Query: 584 KLSDIEKLFGR 594 KL+DIE+LFGR Sbjct: 601 KLADIERLFGR 611 >gi|148253233|ref|YP_001237818.1| DNA mismatch repair protein [Bradyrhizobium sp. BTAi1] gi|166231106|sp|A5ECL8|MUTL_BRASB RecName: Full=DNA mismatch repair protein mutL gi|146405406|gb|ABQ33912.1| DNA mismatch repair protein MutL [Bradyrhizobium sp. BTAi1] Length = 618 Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 237/617 (38%), Positives = 368/617 (59%), Gaps = 23/617 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E+IIN+IAAGE++ERP+ +KEL+EN++DA +SR++ GGG+ ITD+G Sbjct: 1 MPVRQLPEQIINRIAAGEVVERPASVVKELVENAIDAGASRIDIFTDGGGRRKIAITDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT+ ++ +AV+RH TSK+ D D I T GFRGEALPSIG+V+ L++ +R Sbjct: 61 GGMTAADLALAVERHATSKLDDEDLLQIRTLGFRGEALPSIGSVARLSITTRHKSEPHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + + S V P A+N GT VEV DLF PARL FLK+++ E I +V+RR+A+A Sbjct: 121 ALQVDCGEKSPVVPAALNQGTRVEVADLFHATPARLKFLKTDRTEAEAIREVVRRLAMAR 180 Query: 180 PKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P ++FT + + R+ ++G DF ++A+ + + ++G+ Sbjct: 181 PDIAFTIAGEERAPVTWAAALPGAPGQLTRLGDILGADFRSHAIAVQSARESVAVEGFAA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P R NA Y+F+NGR V+DK IL +R AYA+ +P R+PVV L + +DPR+VD N Sbjct: 241 APALTRANALGQYLFVNGRPVRDKLILGAVRAAYADYLPRDRHPVVALFVTLDPREVDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP-- 356 VHPAK+ +RFRN ++R II ++++ + ++G T++ I++F AP P Sbjct: 301 VHPAKTEVRFRNAGLVRALIIHALKEGLAREGRRTAANDGGATIAAFRPAFAPPRPNPGP 360 Query: 357 ---KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED----------------NDPVE 397 + S + + + ++E ++ Sbjct: 361 MNWDWQRSPSAPAAPVPRDHGADAMPAAAAFSPAAFAEPAQAAFDVGGPRADLRLHEQPA 420 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + LG A Q+H YI++QT DGLVIVDQHAAHER+++E+++ ++ + Q L Sbjct: 421 APDLLDRPLGAARTQLHDTYIVAQTRDGLVIVDQHAAHERIVYERLKASLSAHGVQRQIL 480 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P+I++L E ++ ++L G+ E FGP A+A+RE P++L K N LLRD+ Sbjct: 481 LIPDIVELDEAIVEALLARTDELASFGLAIESFGPGAVAVRETPSLLGKINAAGLLRDLA 540 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 + + + L+ R+ ++ ATMAC+GS+R+GR+++ EMN LLREME+ PNS QCNHGR Sbjct: 541 EHMEEWGEALPLERRLMHVAATMACHGSVRAGRRLKPEEMNALLREMEETPNSGQCNHGR 600 Query: 578 PTFIKLKLSDIEKLFGR 594 PT+++LKL+D+EKLFGR Sbjct: 601 PTYVELKLADVEKLFGR 617 >gi|294011778|ref|YP_003545238.1| DNA mismatch repair protein MutL [Sphingobium japonicum UT26S] gi|292675108|dbj|BAI96626.1| DNA mismatch repair protein MutL [Sphingobium japonicum UT26S] Length = 590 Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 223/595 (37%), Positives = 350/595 (58%), Gaps = 7/595 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E ++N+IAAGE++ERP+ A+KE++EN++DA S R+ I+ GG +++D+G Sbjct: 1 MSIRRLPEHLVNRIAAGEVVERPASALKEIVENAVDAGSRRIAIRISNGGLDRIEVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM S EI +A++RH TSK+ DD N+ T GFRGEALPSI +V+ L++ SRP ++ G Sbjct: 61 CGMDSSEIALALERHATSKLPDDAIENVATLGFRGEALPSIASVARLSIDSRPAGSD-GW 119 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S P A+ PGT V V LF +PAR FL+S + E DV+RR+A+A+ Sbjct: 120 NRTVDNGVTVSEGPAALPPGTRVIVEQLFGKVPARRKFLRSAKAEYAACLDVVRRLAMAH 179 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ + + ++ + +N V + + + L G + Sbjct: 180 PAIAFSMEHDGRRVLGVQAGEAREDR---VAALTDRALADNHVIVALEREGVRLSGVASL 236 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT++RG + ++F+NGR V+D+ ++ +R AYA+ + R+PVV L L++ P +VDVNV Sbjct: 237 PTYHRGVGDHQFLFVNGRPVRDRLLVGAVRGAYADMLARDRHPVVALFLDVPPLEVDVNV 296 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ +RFR+P +IR I+ +++A+ +G +S++ + P + P A Sbjct: 297 HPAKTEVRFRDPALIRGMIVSGLRRALEAEGFRAVQHADPAGLSAWRSE--PVSPTPIGA 354 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + + + P + E T + LG+A Q+ + YI+ Sbjct: 355 MPIFEAAGAPVPTHSMADRRPAFLTPPPQARAEPAAAPAPEGTSFPLGVARGQVARTYIV 414 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ DGLVIVDQHAAHERL E+MR+ I +Q LL PE+++L E C + + Sbjct: 415 AEAEDGLVIVDQHAAHERLTLERMRRAMEGQGIAAQALLLPEVVELDEPACDRLEARIAE 474 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L G++ ERFGP A+ +R PA+L + ++ L+ D+ D++ + +L++R++ + AT Sbjct: 475 LKDFGLELERFGPAAMLVRATPAMLGQGDVQGLVSDLADDLAAYDSALSLKERLDLVAAT 534 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MAC+GS+R+GR + EMN LLREME P S QCNHGRPT++KL DIEKLFGR Sbjct: 535 MACHGSVRAGRILSVAEMNALLREMEITPRSGQCNHGRPTWVKLGHGDIEKLFGR 589 >gi|83951218|ref|ZP_00959951.1| DNA mismatch repair protein [Roseovarius nubinhibens ISM] gi|83839117|gb|EAP78413.1| DNA mismatch repair protein [Roseovarius nubinhibens ISM] Length = 636 Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 259/622 (41%), Positives = 388/622 (62%), Gaps = 31/622 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN+LD+ ++R+E A GGKS ++TDNG G Sbjct: 15 IRQLDDAAINRIAAGEVVERPASAVKELVENALDSGATRIEISQAQGGKSLIRVTDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT +++P+A+ RH TSKI D NIH+FGFRGEALPS+GAV LT+ SR ++ A+I Sbjct: 75 MTPQDLPLALSRHATSKIDGSDLLNIHSFGFRGEALPSLGAVGRLTIQSRAAGHD-AAEI 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 +SG +S+ RP A++ GT+V +RDLF+ PARL F++S++ ET I DV++R+A+A P Sbjct: 134 TVSGGDMSAPRPTALSAGTVVTLRDLFYATPARLKFMRSDRAETQAIADVVKRLAMAEPS 193 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNF----PERISQVIGEDFINNAVELNEKSNEITLQ 234 V FT + R G+ R+++V+G +F NA++++ + + Sbjct: 194 VGFTLRDVTGGGEGRVTFRADPEQGDLFDALHRRLARVLGAEFAENAIKIDASREALRMT 253 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG A Y+F+NGR V+DK + +R AY + + R+P VL L DP Sbjct: 254 GYAALPTYSRGAAVAQYLFVNGRPVRDKMLTGALRAAYHDLLSRDRHPAAVLFLTCDPTL 313 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAKS +RFR+P + R I+ ++ A+ ++G SS ++ + +F + Sbjct: 314 VDVNVHPAKSEVRFRDPALARGLIVSGLRHALAEEGHRASSTVAGATLGAFRPEATAPGQ 373 Query: 355 LPK-YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN-------------------- 393 P+ Y + + + S P +++ Sbjct: 374 APRVYQMDRPGPASRAMAYQAQAPLTGAPLSQSPGFADLQAGYSARVEPDELSAPLADHP 433 Query: 394 -DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + LG A AQIH+NYII+QT DGLVIVDQHAAHERL++EK++ + Sbjct: 434 GHEAQADAPLSAPLGAARAQIHENYIIAQTEDGLVIVDQHAAHERLVYEKLKTQQAERGV 493 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 +Q LL PEI++L +G+ +++ EDL LG+ E FG +A+A+RE+PAIL + L Sbjct: 494 AAQALLIPEIVELSDGDRGALLDAAEDLAALGLVIEEFGGSAVAVREVPAILGAVDARAL 553 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 L D++DE+ D ++ T++ RI+ IL+ +AC+GSIRSGR+M++ EMN LLREME P+S Q Sbjct: 554 LLDVLDELSDQGSSMTIRGRIDAILSRVACHGSIRSGRRMRAEEMNALLREMEATPHSGQ 613 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT++KL+L+DIE+LFGR Sbjct: 614 CNHGRPTYVKLQLADIERLFGR 635 >gi|241760909|ref|ZP_04758998.1| DNA mismatch repair protein MutL [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374528|gb|EER63989.1| DNA mismatch repair protein MutL [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 613 Score = 548 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 218/615 (35%), Positives = 359/615 (58%), Gaps = 24/615 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E +IN+IAAGE++ERP+ A+KEL+EN++DA+S+R+ + GG ++ DNG Sbjct: 1 MSIRRLPEDVINRIAAGEVVERPASALKELVENAIDAQSTRILIRLLKGGLDGIEVIDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++E+ +A++RH TSK+ D+ + T GFRGEALPSI +V+ LTL SR +++G Sbjct: 61 IGIPADEMRLALERHATSKLPDNDAIEAVTTLGFRGEALPSIASVARLTLESRTADSDSG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I + + GT ++V LF IPAR F++S + E DV+RR+A+ Sbjct: 121 WKIIVDNGHFEKEGIAPLPKGTRIKVDSLFARIPARRKFMRSAKSEYMACHDVVRRLAMT 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P ++F+ + +N + R++ +I +N+V + + +++ L+G Sbjct: 181 RPDIAFSLEHDGRRIFSLN---GGESRQRRVAALIDRTLKDNSVTVEYQRDQMQLEGVAS 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+RG A+ Y+F+NGR V+D+ ++ ++R AY + + R+PV+ L L + VD+N Sbjct: 238 LPTFHRGLADHQYLFVNGRPVKDRLLIGSVRAAYHDLLAKDRHPVLALFLTLPNSDVDIN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK +RFR+ +R+ I+ +++++++ G ++ + + + + + Sbjct: 298 VHPAKGEVRFRDSQAVRSLIVGALRESLDLSGFRSAQPADVQAMGKWRKSSDLPISTNPA 357 Query: 359 A---------------TSLTNTQEKLFLQENRLSTNDLLPS----DDPTYSEDNDPVEES 399 A S K + T D L S N + S Sbjct: 358 AIHEEKSALSDSGLLFKSRPTEAPKAPSAQAHQRTADDLWSAATKSPIPPMGRNTSTDSS 417 Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 E + + LG+A QI YII+++ DGLVIVDQHAAHERL+ E+MR+ + ++ SQ LL Sbjct: 418 EQSDFPLGLARGQIAATYIIAESKDGLVIVDQHAAHERLVMERMRRALENGQVASQRLLM 477 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P+++++ E C L + ++ +G++ ERFG AI +R PA+L + +++D+ E Sbjct: 478 PDVVEMDEVSCDLFEQRQDEFAAMGLETERFGHEAILVRATPAMLGNCEVKAMIKDLAAE 537 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 I + L+++ ++I+ATMAC+GS+R+GR + EMN LLREME P+S QCNHGRPT Sbjct: 538 ITAYDQSLLLKEKFDHIVATMACHGSVRAGRLLSIAEMNALLREMEITPHSGQCNHGRPT 597 Query: 580 FIKLKLSDIEKLFGR 594 ++KL DIEKLFGR Sbjct: 598 WVKLGHKDIEKLFGR 612 >gi|30249702|ref|NP_841772.1| mutL; DNA mismatch repair protein [Nitrosomonas europaea ATCC 19718] gi|30180739|emb|CAD85653.1| mutL; DNA mismatch repair protein [Nitrosomonas europaea ATCC 19718] Length = 604 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 217/604 (35%), Positives = 330/604 (54%), Gaps = 15/604 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L + +I+QIAAGE+IERP+ +KEL+EN++DA ++ + IA GG ++TDNG Sbjct: 3 PIKLLPDGLISQIAAGEVIERPASVLKELLENAIDAGTTDISVNIAQGGLKLIRVTDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ EE+P+A+ RH TSKI+ +D I + GFRGE L SI +VS+L L+S P Sbjct: 63 GISGEELPLALTRHATSKIASQEDLYRITSLGFRGEGLASIASVSNLLLISHQPGGKHAW 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI G ++ P + GT VEVRDLFF +PAR FLK+E E ++IRRMA+++ Sbjct: 123 QIRSEGIRVMQPEPSSHAAGTTVEVRDLFFNLPARRKFLKTEATEFAHCEEIIRRMALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++FT + + + RI V+GE+F +A ++E+S I LQG + Sbjct: 183 AGIAFTLRHNGN----LRGHWQSAEAAVRIKTVLGEEFTRSAAWIDERSAGIGLQGMLAL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P ++R + Y F+NGR V+DK I +R AY + + L R+ VL L+IDP QVDVNV Sbjct: 239 PAYSRAARDMQYFFVNGRFVRDKLITHALREAYRDVLHLDRHAAFVLYLDIDPEQVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN-----KKGISTSSVLSKKMISSFHQDNAPKTH 354 HP K+ IRFR I FI + KA++ + +SS L I + P Sbjct: 299 HPTKTEIRFREARAIHQFIYHGVSKALSLPRSGTELSQSSSQLMADDIVPPAEKRVPAAP 358 Query: 355 LPKYATSLTNTQE----KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC 410 + Y E + + + + + LG A Sbjct: 359 MLNYPRQTGLPSEMIAQPFNFYQVLSGSESDSTATQNPFRQTGAGESNEHPALPPLGFAL 418 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 Q+H YI++Q GLVIVD HAAHER+++E+++ + +++Q LL P + Sbjct: 419 GQLHGVYILAQNWKGLVIVDMHAAHERIVYEQLKLQMDEQTLSAQRLLIPVTFHADSLDI 478 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 A E+ L +LG + +A+R +PAIL + +L+ +++DEI + L Sbjct: 479 ATAEENQSLLQQLGFEVTVLTATTLAVRAVPAILQDADTEKLVCNVLDEIRNGDPGQLLA 538 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 R +LATMAC+G++R+ R + IEMN LLR+ME S QCNHGRPT+ ++ L++++K Sbjct: 539 ARRNELLATMACHGAVRANRPLTLIEMNELLRKMEVTERSDQCNHGRPTWFEISLAELDK 598 Query: 591 LFGR 594 +F R Sbjct: 599 MFMR 602 >gi|187929904|ref|YP_001900391.1| DNA mismatch repair protein [Ralstonia pickettii 12J] gi|187726794|gb|ACD27959.1| DNA mismatch repair protein MutL [Ralstonia pickettii 12J] Length = 647 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 202/631 (32%), Positives = 330/631 (52%), Gaps = 45/631 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ +KEL+EN+LDA +++++ + GG ITDNG Sbjct: 22 PIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLQIKLEEGGVRRIAITDNGG 81 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++E+P+A+ RH TSKI ++ ++ T GFRGEAL SI +V+ LTL SR + Sbjct: 82 GIPADELPVALMRHATSKIGSLEELESVATLGFRGEALASIASVAELTLTSRTAHDAHAT 141 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + +P + GT V+V+ L+F PAR FLK+EQ E +VIRR A+A Sbjct: 142 QI---IAQTGRAQPASGGVGTTVDVQHLYFNTPARRKFLKTEQTELGHCMEVIRRTALAR 198 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ + N + R + V+G +F + E + E+ L G+ G+ Sbjct: 199 PDVAISVHHNGKPLEHWNATQADS----RSAAVLGTEFARARLPFEESAGELRLFGFAGL 254 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RG A+ + ++NGR V+D+ + +R+AY + + R+P VL LE+ P VDVNV Sbjct: 255 PTASRGRADHQFFYVNGRFVRDRLLTHAVRSAYEDVLHGDRFPAYVLCLELPPEAVDVNV 314 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP+K +RFR+ + F+ ++Q+A+++ L + + P Sbjct: 315 HPSKIEVRFRDSRAVHQFVYHAVQRALSRHAGEQGDSLRTDIAEAPEGAGVATAPSPADN 374 Query: 357 --KYATSLTNTQEKLFLQENRLST-----NDLLPSDDPTYSEDNDPVEES---------- 399 ++ + Q L + + R D P + D + Sbjct: 375 TTRWINQMAARQTSLGIAQPRAEYLSMMRGDSAPMPPTRPAWMADVPSAATLFDGGAATA 434 Query: 400 ----------------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 E + LG A AQ+H Y+++Q T G+V+VD HAAHER+++E++ Sbjct: 435 QSPAAVAEPAAAQQADEDDAHPLGFAVAQLHGIYVLAQNTRGMVLVDMHAAHERILYEQL 494 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + + ++ Q LL P E E + L LG P +A+R +P + Sbjct: 495 KTALETKRVEVQPLLIPVTFAANPVEIGTAEEFRDTLTLLGFDISAVSPTTLAVRSVPTL 554 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 L K + L RD++ ++ + L +R +LAT+AC+ ++R+ R++ EMN LLR+ Sbjct: 555 LQKADAQALARDVLRDLHAYGGSRVLAERQNELLATLACHSAVRANRRLNLDEMNALLRQ 614 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ME + QCNHGRPT+I+L ++D+++LF R Sbjct: 615 MEATERADQCNHGRPTWIQLTVADLDRLFLR 645 >gi|82702273|ref|YP_411839.1| DNA mismatch repair protein MutL [Nitrosospira multiformis ATCC 25196] gi|82410338|gb|ABB74447.1| DNA mismatch repair protein MutL [Nitrosospira multiformis ATCC 25196] Length = 616 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 213/615 (34%), Positives = 336/615 (54%), Gaps = 27/615 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + +I+QIAAGE++ERP+ A+KEL+ENSLDA ++ V + GG ++ DNG G Sbjct: 4 IQPLPDLLISQIAAGEVVERPASALKELLENSLDAGATEVTVQLFQGGVKLVRVADNGAG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ E++P+A+ RH TSKI +D N+ + GFRGEAL SI +VS L L+SR + + Sbjct: 64 ISGEDLPLALARHATSKIRTLEDLQNVPSLGFRGEALASIASVSRLALVSRSAGDKHAWR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A GT VE+RDL+F PAR FLK+E E V +R+A++ P Sbjct: 124 IEAEAGRFTPPEPAAFAQGTAVEMRDLYFNTPARRKFLKTEATEFAHCESVFKRIALSRP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V FT + R + + RI+ V+G++F +V +++++ ++ L G +P Sbjct: 184 SVGFTLQHNGTVRSHLRT----ADARLRIAAVLGDEFSQASVFVDDQAADLRLWGMAALP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 ++R + + Y F+NGR V+DK + +R AY + + L R+P VL LEI+ VDVNVH Sbjct: 240 AYSRSSGDAQYFFVNGRFVRDKLVAHALREAYRDILHLDRHPAFVLFLEINGGGVDVNVH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-SSVLSKKMISSF------HQDNAPKT 353 P+K+ +RFR+P + FI ++ KA+ ++ ++V + F AP Sbjct: 300 PSKTEVRFRDPRALHQFIFHTVDKALAMPHLTGGAAVPVAGKLPEFTRKAAGEVSLAPPA 359 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE--------------S 399 + + A + ++ + + L SD + Sbjct: 360 YSRQDAIPFASAAPQIKAAQPQAFYQVLFGSDSNAGTRQTGYQAGINGQSAFMKPEGTVR 419 Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 E LG A AQ+ YI+SQ GL+IVD HAAHER+++EK++ ++ ++ Q LL Sbjct: 420 EPEIPPLGFALAQLLGVYILSQNERGLLIVDMHAAHERILYEKLKSALDNHTLSMQPLLI 479 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P + A E+ LH +G + F P +A+R +PA L ++ L RD+++E Sbjct: 480 PAAFRADSQDIATAEENSAVLHDIGFEISPFSPVMLAVRAVPAALKDADVVTLARDVLNE 539 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 I + + L R +LATMAC+G+IR+ R + EMN LLREME S QCNHGRPT Sbjct: 540 IREFGGSQVLVSRRNELLATMACHGAIRANRSLSIPEMNALLREMEITERSGQCNHGRPT 599 Query: 580 FIKLKLSDIEKLFGR 594 + ++ +D++K+F R Sbjct: 600 WFEISRTDLDKMFMR 614 >gi|13476839|ref|NP_108408.1| DNA mismatch repair protein [Mesorhizobium loti MAFF303099] gi|20455124|sp|Q983L2|MUTL_RHILO RecName: Full=DNA mismatch repair protein mutL gi|14027600|dbj|BAB53869.1| DNA mismatch repair protein; MutL [Mesorhizobium loti MAFF303099] Length = 627 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 273/627 (43%), Positives = 397/627 (63%), Gaps = 34/627 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+LSE +INQIAAGE+IERP+ +KEL+EN+LDA +SRVE V AGGG + ++TD+G Sbjct: 1 MPIRQLSETMINQIAAGEVIERPASVVKELVENALDAGASRVEVVTAGGGLNLIRVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ E+ +A+ RHCTSK+++D ++I + GFRGEALPSIG+VS L++ SR ++ A+ Sbjct: 61 SGIPEPELALAIARHCTSKLAEDINDIRSLGFRGEALPSIGSVSRLSIRSRTALGDSAAE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G ++ VRP A N GT VEVRDLFF PARL F+K E+ E++ +DV++R+AIA+P Sbjct: 121 IGIEGGRVLPVRPAAANRGTTVEVRDLFFATPARLKFMKGERAESSATSDVVKRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNF--QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V FT + + ++ S G+ ++QV+G +F +N++ ++ + L G+ Sbjct: 181 AVRFTLAGSDRSTLELPATDDSPEGSLRR-VAQVMGAEFPDNSIAIDAMREGVHLTGHVS 239 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 IP+F+R NA Q Y ++NGR V+DK I IR A+A+ +P R+ V VL L +DP VDVN Sbjct: 240 IPSFSRANALQQYAYVNGRPVRDKLIAGAIRGAFADVLPRDRHAVTVLFLTLDPAIVDVN 299 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL--- 355 VHPAK+ +RFR+P ++R I+ +I++A+ GI +++ + M+++F A H Sbjct: 300 VHPAKADVRFRDPGLVRGLIVGAIRQALADAGIRSATTGAAGMMAAFRPGAASYNHGGPA 359 Query: 356 -------------------PKYATSLT-----NTQEKLFLQENRLSTNDLLPSDDPTYSE 391 P + E+ + S D Sbjct: 360 NGHRSYEAAYRASGSAGFDPARSPQRPLDMQFGDFERAGARHGGFSEPGQAAFDTGPLVS 419 Query: 392 DNDPVEESEATHYQLGIACA----QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 + V ++E T LG Q+H+NYI++QT D LVIVDQHAAHERL++E ++ Sbjct: 420 ADARVGQNETTETLLGTVLGAARAQVHENYIVAQTRDSLVIVDQHAAHERLVYEALKNAL 479 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 +S + SQ LL PEIIDL E + + H E L R G+ ERFGP A+A+RE P++L + Sbjct: 480 HSRPVPSQMLLLPEIIDLPEEDAERLAMHSETLARFGLGIERFGPGAVAVRETPSMLGET 539 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 N+ QL+RD+ DEI D+ T TL++R++ I ATMAC+GS+RSGR +++ EMN LLR+ME Sbjct: 540 NVQQLVRDLADEIADNDTVETLKERLDKIAATMACHGSVRSGRLLKAEEMNALLRQMEAT 599 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 P S CNHGRPT+I+LKL+DIE+LFGR Sbjct: 600 PGSGTCNHGRPTYIELKLADIERLFGR 626 >gi|240849931|ref|YP_002971320.1| DNA mismatch repair protein MutL [Bartonella grahamii as4aup] gi|240267054|gb|ACS50642.1| DNA mismatch repair protein MutL [Bartonella grahamii as4aup] Length = 617 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 267/617 (43%), Positives = 399/617 (64%), Gaps = 24/617 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ +KEL+EN++DA ++R+E + A GGK+F +++DNG Sbjct: 1 MIIRHLSENIINQIAAGEVIERPANVVKELVENAIDAGATRIEIITANGGKNFIKVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 +G+ ++++ +AV RHCTSKI+DD NI GFRGEALPSIG+V+ L L+SR + A+ Sbjct: 61 YGIPADQLTLAVSRHCTSKITDDVHNICFLGFRGEALPSIGSVAKLKLISRTKDAESAAE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I+++ KI +P A N GTIVEVRDLFF PARL F+K+++ ETN I+D+I+R+AIA+P Sbjct: 121 ISVTAGKIVGPKPAAANLGTIVEVRDLFFVTPARLKFMKTDRAETNAISDMIKRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ S + +++ + +RI+Q++G++F N++ LN + + L G+ + Sbjct: 181 HIRFSLSGLDRTSMELSATENNIQGQLQRITQIMGKEFAPNSIALNAEREAVRLTGFACL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNR N+ + ++NGR V+DKF+ IR AYA+ + RYPV +L +++ P +VDVNV Sbjct: 241 PSFNRNNSLHQFAYVNGRPVRDKFLWGAIRGAYADVMTRDRYPVAILFIDLPPAEVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ +RFR+P +IR I+ +I++A+ + GI +S S+ +++F Q P P Sbjct: 301 HPAKADVRFRDPGLIRGLIVGAIREALQQSGIRPTSTRSEATLAAF-QIQKPLVQQPLGN 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED----------------------NDPVE 397 T+ Q + + ++ S + Sbjct: 360 FKNTHQSSSYSPQPHHFAAASMVHKPLDITSSFGLKEDATPIMEGLNIPSGDTYIPNTTS 419 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 SE Y LG A AQIH+NYII+QT D L+IVDQHAAHERL++E ++ S + SQ L Sbjct: 420 SSEELSYPLGAARAQIHKNYIIAQTQDSLIIVDQHAAHERLVYEALKNALYSKPLPSQLL 479 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L PEI++L E + ++ H + L + G+ E FGP AI +RE P++L + N+ L++D+ Sbjct: 480 LIPEIVELSEEDATCLLTHKDALQKFGLGIEPFGPGAIVVRETPSMLGEINVQALIKDLA 539 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 DE + TT L+ ++ + ATMAC+GSIRSGR ++ EMN LLR+ME PN+S CNHGR Sbjct: 540 DEAAEYDTTNNLKAMLDYVAATMACHGSIRSGRLLRPEEMNTLLRQMEAIPNTSTCNHGR 599 Query: 578 PTFIKLKLSDIEKLFGR 594 PT+I+LKL+DIE+LFGR Sbjct: 600 PTYIELKLADIERLFGR 616 >gi|83859480|ref|ZP_00953001.1| DNA mismatch repair protein MutL [Oceanicaulis alexandrii HTCC2633] gi|83852927|gb|EAP90780.1| DNA mismatch repair protein MutL [Oceanicaulis alexandrii HTCC2633] Length = 638 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 246/637 (38%), Positives = 377/637 (59%), Gaps = 43/637 (6%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M IR+LS + +N+IAAGE++ERP+ A+KEL+EN+LDA + R++ I GGG + I D+ Sbjct: 1 MTLIRRLSPETVNRIAAGEVVERPASAVKELVENALDAGAQRIDIRIEGGGLTRIVIEDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKI------SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPP 113 G GM +E + A++RH TSK+ DD NIH+ GFRGEALPSIG+V+ L + ++ Sbjct: 61 GSGMDAEGLETAIERHATSKLPVGEDGQDDLLNIHSMGFRGEALPSIGSVARLNITTQDE 120 Query: 114 QNNTGAQIAISGEKISSVRPVA--MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + ++++ G S RP GT VEV DLF+ PARL FLKSE+ E+ ++DV Sbjct: 121 ELGGAWELSVEGGTKSGPRPAPSLGRRGTRVEVCDLFYATPARLKFLKSERAESTAVSDV 180 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN---FPERISQVIGEDFINNAVELNEKS 228 I+R+A+A P V F S +R +ST R+S ++G DF NA+ ++++ Sbjct: 181 IKRLALARPDVGFFLSVDGRSRVSAPAESTEDRDEARRGRLSSILGADFGENALVIDQER 240 Query: 229 NEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL 288 + L G +PT+NRG+ ++F+NGR V+DK I+ +R AY + + R+PVV L + Sbjct: 241 EGVHLTGLASLPTYNRGSNQHQFLFVNGRPVKDKLIVGAVRGAYQDFLARDRHPVVALYV 300 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 ++ VDVNVHPAK+ +RFR+ ++R I+ +++ A+ G S+ ++ + + Sbjct: 301 DLPSSHVDVNVHPAKAEVRFRDSGLVRGLIVGALRHALAGAGHRASTTVAGYALGRARPE 360 Query: 349 NAPKTHLP-----KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP-------- 395 AP LP ++ N + + + +E + Sbjct: 361 GAPTHALPLTRGSSISSGWANRPSPAWESQLSEHHETSGYGYGESQTEASQYGRGDLAPG 420 Query: 396 ------------------VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 E+ + LG+A AQ+H Y+I+QT DGLVIVDQHAAHER Sbjct: 421 MSARTEPSYGGEPADGAPAAETHTPDFPLGVARAQVHATYVIAQTEDGLVIVDQHAAHER 480 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 L++E+M++ T + Q LL PEI++L E E +++ E L LG+ E FGP A+A+ Sbjct: 481 LVYERMKKQLADTGVARQALLVPEIVELDEAEARRVLDRAEQLAELGLVIEPFGPGALAV 540 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 RE PA+L + ++ L+RD+ DEI + +L++++E ++ TMAC+GS+RSGR++ EM Sbjct: 541 RETPALLKRLDVQGLIRDLADEIAEYDEALSLKEKLEEVVGTMACHGSVRSGRRLTGDEM 600 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N LLREME P+S QCNHGRPT+++LKL+DIE+LFGR Sbjct: 601 NALLREMEATPHSGQCNHGRPTYVELKLADIERLFGR 637 >gi|224826520|ref|ZP_03699621.1| DNA mismatch repair protein MutL [Lutiella nitroferrum 2002] gi|224601121|gb|EEG07303.1| DNA mismatch repair protein MutL [Lutiella nitroferrum 2002] Length = 629 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 218/629 (34%), Positives = 329/629 (52%), Gaps = 40/629 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENSLDA + R+ +A GG ++TDNG Sbjct: 3 RIHALPDHLVNQIAAGEVVERPASALKEMLENSLDAGADRITVDLAQGGIKLIRVTDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+A+ RH TSKI+ D ++ T GFRGE L SI +VS LTL+SRP + Sbjct: 63 GIVPDDLPLALDRHATSKIASLADLESVATLGFRGEGLASIASVSRLTLISRPHEEAHAY 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + SV P A PGT VEV DL+F PAR FLKSE E R+A+A+ Sbjct: 123 QIIAIDGALHSVEPAAHAPGTSVEVVDLYFNTPARRKFLKSENTEYAHCAATFERIALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V F +++ QS ER+ ++G+DF+ A+ L + + L G+ Sbjct: 183 PQVEFLLRHNGKVVWRLPAQS----LAERVGALLGKDFVEAALPLETAAGGLQLAGFVAS 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT+++ + + Y ++NGR V+DK +R AY + + R+P L L IDP VDVNV Sbjct: 239 PTYSKASRDAQYFYVNGRFVRDKTAQHALRQAYRDVLHHDRHPAYALFLTIDPAGVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RFR I F+ S+ KA+ + ++ + P A Sbjct: 299 HPTKIEVRFRESQAIHQFLFHSVNKALAATTAGAAPAVALAEGVATPSSANLSGASPAPA 358 Query: 360 TSLTNTQ----------------------------------EKLFLQENRLSTNDLLPSD 385 +Q L +E + T P Sbjct: 359 GLFATSQTGNGRTPVQSYRYEQQSIPLGVAREAIGVYDAMFSGLREEERQADTRPAGPLP 418 Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 P + + +S+ LG A AQ+H YI+SQ +GL++VD HAAHER+++E+++ Sbjct: 419 SPLPAATLATLPDSDDGIPPLGFALAQLHGVYILSQCQEGLIVVDMHAAHERIVYERLKN 478 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 + I Q LL P E A + EH E++ RLG++ P IA+R +P L Sbjct: 479 ALEADSIPMQPLLLPVSFAADRMEAATVHEHGEEMKRLGVELAPLSPTQIAVRGVPVWLK 538 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 N +L R ++ ++ + T L +R +LATMAC+G++R+ R++ EMN LLR+ME Sbjct: 539 DGNPVELARAVLKDVREFGLTRVLTERRNELLATMACHGAVRANRQLTLAEMNALLRDME 598 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ +L + D++ LF R Sbjct: 599 ATERSGQCNHGRPTWSRLTMKDLDNLFMR 627 >gi|113869023|ref|YP_727512.1| DNA mismatch repair protein [Ralstonia eutropha H16] gi|113527799|emb|CAJ94144.1| DNA mismatch repair protein MutL [Ralstonia eutropha H16] Length = 660 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 205/648 (31%), Positives = 336/648 (51%), Gaps = 62/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ +KEL+EN+LDA ++++ + GG ITDNG Sbjct: 18 PIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLGIRLEEGGVRRIVITDNGC 77 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + E+P+A+ RH TSKI+ D+ ++ T GFRGEAL SI +VS L L SR + Sbjct: 78 GIPAAELPVALMRHATSKIASLDELESVLTLGFRGEALASIASVSQLALTSRTAADAHAT 137 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q++ + +P + GT V+V+ L+F PAR FLKSEQ E +++RR+A+A Sbjct: 138 QVSADTGTV---QPASGGVGTTVDVQHLYFNTPARRKFLKSEQTELGHCLEMVRRVALAR 194 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ + N G+ R +QV+G DF + L+E+++ + L G+ G+ Sbjct: 195 PDVTISVHHNGKPLEHWNA----GDVATRTAQVLGNDFARARLPLDEEADTLHLYGFAGL 250 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RG +Q Y F+NGR V+DK + +R+AY + + R+P VL L++ P VDVNV Sbjct: 251 PTASRGRPDQQYFFVNGRFVRDKLLNHAVRSAYQDVLHGDRFPSYVLCLDLPPEMVDVNV 310 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL---- 355 HP+K +RFR + F+ ++Q+ + ++ L + T Sbjct: 311 HPSKIEVRFRESRAVHQFVYHAVQRCLARQAGGNGDSLHTDADGEITLPSGGATPAGGAR 370 Query: 356 ----------PKYATSLTNTQEKLFLQENRLST----NDLLPSDDPTYSEDNDPVEESEA 401 ++ Q +L + + R + D Y ++ A Sbjct: 371 PGFGGGSGGGGQWINYSAARQTELGIAQPRQAYLGMVRDAAAPAARPYGAMPGTPAQAPA 430 Query: 402 T-----------------------------------HYQLGIACAQIHQNYIISQTTDGL 426 + LG A AQ+H Y+++Q GL Sbjct: 431 WLADAQAARADDPPGLLDRLPPAARAGFADPADAPDDHPLGYAIAQLHGIYVLAQNARGL 490 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 V+VD HAAHER+++E+++ ++ + Q LL P + E + EH E L LG Sbjct: 491 VLVDMHAAHERILYEQIKAGLDARDLAVQPLLIPVTLPGSPVEIGVAEEHQETLTLLGFD 550 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 P +A+R +PA+L + + L RD++ ++ + L +R +LAT+AC+ ++ Sbjct: 551 IAPVSPTTLAVRAVPALLQQADAEALARDVLRDLHAYGGSRVLAERRNELLATLACHSAV 610 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R+ RK+ EMN LLR+ME+ + QCNHGRPT+++L ++++++LF R Sbjct: 611 RANRKLTLEEMNALLRQMEQTERADQCNHGRPTWVQLTVTELDRLFLR 658 >gi|253998998|ref|YP_003051061.1| DNA mismatch repair protein MutL [Methylovorus sp. SIP3-4] gi|253985677|gb|ACT50534.1| DNA mismatch repair protein MutL [Methylovorus sp. SIP3-4] Length = 624 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 210/623 (33%), Positives = 332/623 (53%), Gaps = 35/623 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ A+KEL+ENSLDA SS + + GG ++TD+G G Sbjct: 4 IKLLPDQLISQIAAGEVVERPASALKELLENSLDAGSSDIAVTLGQGGVKLLRVTDDGNG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++ +A+ RH TSKI+ DD ++ + GFRGEAL SI ++S ++ SR + + + Sbjct: 64 IPHGDLTLALTRHATSKIASLDDLESVASLGFRGEALASIASISRTSITSRHAEASHAWR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 IA G + P A++ GTIVEV+D++F PAR FLK+EQ E + RR+A++ P Sbjct: 124 IAADGGLLGDAAPAALDRGTIVEVQDIYFNTPARRKFLKTEQTEFGHCEEAFRRIALSRP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F ++ G R ++V+G DF A EL+E + + L G P Sbjct: 184 DVGFMLQHNGRALMRL----APGEAKRRFTEVLGPDFSAEAFELDESAGGLRLWGMAAKP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TF+R + YV++NGR V+DK I IR AY + + R+P L LE+DP VDVNVH Sbjct: 240 TFSRSARDTQYVYVNGRFVRDKLISHAIRQAYQDVLHHDRHPAFALFLELDPTLVDVNVH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS-----------VLSKKMISSFHQDN 349 P+K+ +RFR + FI ++ KA+ ++ I + Sbjct: 300 PSKTEVRFREGQAVHRFIFHALHKALATPVGLPANGLVPPPAAAPATSYSPGIPAGQPYP 359 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLS------------TNDLLPSDDPTYSEDNDPVE 397 + A + LF R + ++ L + + Sbjct: 360 RQQGSFDLRANEAPGFYQTLFGGLPREAVDTASSFVPSAISSADLQATLSPSQASSSLSP 419 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E A Y LG A AQ+H Y+++Q GL++VD HAAHER+++E+++ + + Q L Sbjct: 420 EQAAQEYPLGFALAQLHGVYVLAQNALGLIVVDMHAAHERIMYERLKNALDGDSVPMQPL 479 Query: 458 LTPEIIDLLEGECALIMEH------DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 L P + E A + E + LH+LG + + P+ +A+R IPA+L + Sbjct: 480 LLPVSFNADRFEVATVQEQLSTPEGQQTLHQLGFEIVQLSPSTLAVRAIPAMLQDADAVA 539 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 L RD++ ++ + + L +R +LATMAC+ ++R+ R + EMN LLR+ME S Sbjct: 540 LARDVLRDLREYGGSRVLTERRNELLATMACHAAVRANRILSIQEMNALLRDMEATERSG 599 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+ + ++D++K+F R Sbjct: 600 QCNHGRPTWFQATMADLDKMFMR 622 >gi|17547282|ref|NP_520684.1| DNA mismatch repair protein [Ralstonia solanacearum GMI1000] gi|20455088|sp|Q8XWB1|MUTL_RALSO RecName: Full=DNA mismatch repair protein mutL gi|17429584|emb|CAD16270.1| probable dna mismatch repair protein mutl [Ralstonia solanacearum GMI1000] Length = 636 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 206/632 (32%), Positives = 336/632 (53%), Gaps = 46/632 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ +KEL+EN+LDA +++++ + GG ITDNG Sbjct: 10 PIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLQIKLEEGGVRRIAITDNGG 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A+ RH TSKI ++ ++ T GFRGEAL SI +V+ LTL SR Q+ Sbjct: 70 GIPVDELPVALMRHATSKIGSLEELESVATLGFRGEALASIASVAELTLTSRTAQDAHAT 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ +P + GT V+V+ L+F PAR FLK+EQ E +VIRR A+A Sbjct: 130 QIIAQTGRV---QPASGGVGTTVDVQHLYFNTPARRKFLKTEQTELGHCLEVIRRTALAR 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ + N R + V+G +F + E + E+ L G+ G+ Sbjct: 187 PDVAISVHHNGKPLEHWNA----AQADMRTAAVLGTEFARARLPFEEAAGELRLFGFAGL 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RG A+ + ++NGR V+D+ + +R+AY + + R+P VL LE+ P VDVNV Sbjct: 243 PTASRGRADHQFFYVNGRFVRDRLLTHAVRSAYEDVLHGDRFPAYVLCLELPPEAVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA---PKTHLP 356 HP+K +RFR+ + F+ ++Q+A+++ L + + Q A P + Sbjct: 303 HPSKIEVRFRDSRAVHQFVYHAVQRALSRHAGEQGDSLRTDIADAPEQPGATATPADNTT 362 Query: 357 KYATSLTNTQEKLFLQENRL--------------STNDLLPSDDPTYSEDND-------- 394 ++ + Q L + + R S+ +D P+ + D Sbjct: 363 RWVNQMAARQTSLGIAQPRAEYLAMMRGGSAPQPSSRPAWMADVPSAATLFDGAASAPAD 422 Query: 395 ------------PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 P + + LG A AQ+H Y+++Q G+V+VD HAAHER+++E+ Sbjct: 423 AAPAQASEPAAAPQADDSDDAHPLGFAVAQLHGIYVLAQNARGMVLVDMHAAHERILYEQ 482 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 ++ + +I Q LL P E E + L LG P +A+R +P Sbjct: 483 LKTALEARRIEVQPLLIPVTFAASPVEIGTAEEFGDTLDLLGFDISAVSPTTLAVRAVPT 542 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 +L K + L RD++ ++ + L +R +LAT+AC+ ++R+ R++ EMN LLR Sbjct: 543 LLQKADAQALARDVLRDLQAYGGSRVLAERQNELLATLACHSAVRANRRLNLDEMNALLR 602 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +ME + QCNHGRPT+I+L ++D+++LF R Sbjct: 603 QMEATERADQCNHGRPTWIQLTVADLDRLFLR 634 >gi|114799039|ref|YP_759640.1| DNA mismatch repair protein [Hyphomonas neptunium ATCC 15444] gi|114739213|gb|ABI77338.1| putative DNA mismatch repair protein MutL [Hyphomonas neptunium ATCC 15444] Length = 634 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 228/624 (36%), Positives = 359/624 (57%), Gaps = 32/624 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IRKL ++N+IAAGE++ERP+ A+KEL+EN+LDA + + I GG I D+G Sbjct: 10 TIRKLPADVVNRIAAGEVVERPAAAVKELVENALDAGARSIAIAIEEGGLKRITIEDDGC 69 Query: 62 GMTSEEIPMAVQRHCTSKI------SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN 115 G++++++ +A++RH TSK+ D NI+T GFRGEALPSI +VS + ++SR Sbjct: 70 GLSADDLLIALERHATSKLVPDTEGRVDLLNIYTMGFRGEALPSIASVSRMRIVSRASGE 129 Query: 116 NTGAQIAISGEKISSVRPV----AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + A+I ++ RP GT ++V DLF PARL F++ E+ E +TD Sbjct: 130 D-AAEIFSDAGRLDGPRPAAFTGRSETGTRIDVNDLFHATPARLKFMRGERAEAMAVTDA 188 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNE 230 ++R+A+A P+V+F+ + + ++ + + +R+ ++G DF +NAV ++ Sbjct: 189 VKRLAMANPEVAFSLESNGRSLFRYPAEGPGDAGRLKRLGAIMGRDFSDNAVAVDATREG 248 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 + L G+ G+PT NRGNA ++F+NGR V+D+ + +R AY + + R+P+ L +++ Sbjct: 249 VRLSGFAGLPTLNRGNAQMQFLFVNGRPVKDRMLTGVVRAAYQDFLARDRHPMAALFVDL 308 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 DP VDVNVHPAK+ +RFR+ +R +I +++ A+ G S+ ++ + + A Sbjct: 309 DPEGVDVNVHPAKTEVRFRDAGGVRGLMISALRHALAAAGHRASTTVAGFALGKARAEPA 368 Query: 351 PKT----HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT---- 402 P+ P+ + R D + D V + A Sbjct: 369 PQAGFLWQAPQPGGYVQRPAMPPQGYAARQVEEDGASAPFAPRGYVPDYVPDQGAPGAKV 428 Query: 403 ------------HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 Y LG A AQ+H+ YII+QT DG+VIVDQHAAHERL++E M++ Sbjct: 429 ETGPMPAPGMLGEYPLGAARAQVHETYIIAQTADGIVIVDQHAAHERLVYEAMKRQMAEG 488 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 + Q LL P+I++L E E + E+L LG++ E FGP AIA+R PA+ + + Sbjct: 489 GVRRQALLIPDIVELSEDEAHRVCARAEELAALGLEIEPFGPGAIAVRATPALFGEMDAA 548 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 L+RD+ D+ + TL +R E ++ MAC SIR+GR++ + EMN LLR+ME P+S Sbjct: 549 GLIRDLADDFAEYEAGLTLSERFEEVMGNMACRSSIRAGRRLNADEMNALLRQMEATPHS 608 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+++LKL+DIE+LFGR Sbjct: 609 GQCNHGRPTYVELKLADIERLFGR 632 >gi|255263413|ref|ZP_05342755.1| mismatch repair protein MutL [Thalassiobium sp. R2A62] gi|255105748|gb|EET48422.1| mismatch repair protein MutL [Thalassiobium sp. R2A62] Length = 605 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 245/601 (40%), Positives = 376/601 (62%), Gaps = 20/601 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN++D+ + R++ A GGKS ++ D+G G Sbjct: 15 IRQLDDAAINRIAAGEVVERPASAVKELVENAVDSGARRIDVSYADGGKSLIRVVDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + ++P+A+ RH TSKI D NIHTFGFRGEALPS+GAV L++ SR + I Sbjct: 75 IEAADLPLALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLSITSRATGD--AHVI 132 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 + G + VRP A++ GT VE+RDLF+ PARL F++S++ E I DV++R+A+A P Sbjct: 133 KVEGGTMQPVRPAALSAGTTVELRDLFYATPARLKFMRSDRAEAQAIGDVVKRIAMAEPF 192 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQ 234 V+ T + R + G+ + R+++V+G +F N++ ++ + L Sbjct: 193 VAITLRDVTGGGEGRVVFRADAEQGDLFDALHGRLARVLGREFAENSILVDTEREGFHLT 252 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG++ Y+F+NGR V+DK + +R AY++ + R+P L ++ DP Sbjct: 253 GYAALPTYSRGSSVAQYLFVNGRPVRDKMLYGALRGAYSDFLSRDRHPAAALFIDCDPTL 312 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA-PKT 353 VDVNVHPAKS +RFR P I+R I+ ++ A+ G S+ ++ + +F + + Sbjct: 313 VDVNVHPAKSEVRFREPGIVRGLIVSGLRHALADAGHRASTTVAGATLGAFTPEPTGARV 372 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 + T+ ++ Q + + D + + LG A Q+ Sbjct: 373 YQMDRPTAGFAIAAQMAPQ---------VFEEAAAVFARVDETPQVVEQDHPLGAARGQV 423 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H+NYII+QT DG+VIVDQHAAHERL++E+++ + +Q LL PEI++L E +C + Sbjct: 424 HENYIIAQTKDGMVIVDQHAAHERLVYERLKNQMAENGVAAQALLIPEIVELSESDCTRL 483 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 ME DL +LG+ E FG A+A+RE PAIL + N +LRD++DE+ D + +Q +I Sbjct: 484 MEVAGDLAKLGLTIEPFGGGAVAVRETPAILGEVNAEAMLRDVLDELDDVGDSQLVQAKI 543 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E IL+ +AC+GSIRSGR M++ EMN LLREME P+S QCNHGRPT+++LKL+DIE+LFG Sbjct: 544 EAILSRVACHGSIRSGRWMRAEEMNALLREMEATPHSGQCNHGRPTYVELKLADIERLFG 603 Query: 594 R 594 R Sbjct: 604 R 604 >gi|163739395|ref|ZP_02146806.1| DNA mismatch repair protein MutL [Phaeobacter gallaeciensis BS107] gi|161387465|gb|EDQ11823.1| DNA mismatch repair protein MutL [Phaeobacter gallaeciensis BS107] Length = 650 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 256/635 (40%), Positives = 378/635 (59%), Gaps = 44/635 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA ++R+ IA GGK+ ++TD+G G Sbjct: 16 IRQLDDSAINRIAAGEVVERPASAVKELVENAIDAGATRITIEIADGGKTLIRVTDDGCG 75 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 M+ ++P+A+ RH TSKI D NIHTFGFRGEALPS+GAV L++ SR AQI Sbjct: 76 MSPADLPLALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLSITSRAKDQE-AAQI 134 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++G + V+P A+ GT+VE+RDLF+ PARL F++S++ ET I DVI+R+A+A P Sbjct: 135 RVAGGRTEPVKPAALRVGTVVELRDLFYATPARLKFMRSDRAETQAIGDVIKRLAMAEPS 194 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQ 234 V FT S R G+ + R++ V+G +F NA++++ + + L Sbjct: 195 VGFTLRDVSGGGEGRVTFRADPLTGDLFDALHGRLATVLGREFAENALKIDATRDGVRLF 254 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG A ++F+N R V+DK + +R AY + + R+P L L+ DP Sbjct: 255 GYAALPTYSRGAAVAQFLFVNTRPVKDKMLTGALRAAYFDFLSRDRHPAAALFLDCDPTL 314 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAKS +RFR+P + R I+ +++ + + G SS ++ + + + Sbjct: 315 VDVNVHPAKSEVRFRDPGVARGLIVSALRHGLAEAGHRASSTVAGATLGAMRPEPMASQP 374 Query: 355 LPKYATSL----------------TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 A + + + + + +YS E Sbjct: 375 GADGAPRIYQMDRPSLGARSLSYAAQAPGQSGIAGSDMPPPSGFAELAQSYSGRVTETPE 434 Query: 399 SEATHYQLGIAC-------------------AQIHQNYIISQTTDGLVIVDQHAAHERLI 439 S+ G Q+H+NYII+QT DG+VIVDQHAAHERL+ Sbjct: 435 SQNPAMAPGQPFERSETSAPGAEQLPLGAARGQVHENYIIAQTADGMVIVDQHAAHERLV 494 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +EK+++ T + +Q LL PEI++L EG+CA I+ +DL+R G+ E FG AIA+RE Sbjct: 495 YEKLKRQMAETGVAAQALLIPEIVELSEGDCARILAVADDLNRFGLGIEAFGGGAIAVRE 554 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 PAIL N ++RDI+DE+ D + +Q +IE IL+ +AC+GSIRSGR M+ EMN Sbjct: 555 TPAILGTVNAEAMVRDILDELDDQGESQLVQAKIEAILSRVACHGSIRSGRWMRGEEMNA 614 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LLREME P+S QCNHGRPT+++LKL+DIE+LFGR Sbjct: 615 LLREMEATPHSGQCNHGRPTYVELKLADIERLFGR 649 >gi|306840954|ref|ZP_07473695.1| DNA mismatch repair protein MutL [Brucella sp. BO2] gi|306289011|gb|EFM60276.1| DNA mismatch repair protein MutL [Brucella sp. BO2] Length = 618 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 268/616 (43%), Positives = 390/616 (63%), Gaps = 28/616 (4%) Query: 7 SEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSE 66 SE IINQIAAGE+IERP+ IKEL+EN++DA ++R+E V AGGGK+ ++TDNG G+ ++ Sbjct: 2 SETIINQIAAGEVIERPASVIKELVENAIDAGATRIEVVTAGGGKTLLRVTDNGSGIPAD 61 Query: 67 EIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGE 126 E+ +AV RHCTSK++DD +I GFRGEALPSIG+VS LTL SRP ++G ++ ++G Sbjct: 62 ELALAVSRHCTSKLTDDVHDIRALGFRGEALPSIGSVSKLTLKSRPQDADSGFEVCVTGG 121 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 + RP A+N GTIVEVRDLF+ PARL F+K+++ E ITDV++R+ IA+P + F+ Sbjct: 122 HLDGPRPTALNRGTIVEVRDLFYATPARLKFMKTDRAEATAITDVVKRIGIAFPHIRFSL 181 Query: 187 STIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRG 245 + ++M + ERI QV+G +F NA+ ++ + + + L G+ GIP+FNRG Sbjct: 182 AGTDRTPFEMPATGTGAEATLERIGQVLGREFGENALAIDAERDGVRLAGFVGIPSFNRG 241 Query: 246 NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSY 305 NA + ++NGR V+DK I +R AY++ I R+PV VL L +DP VDVNVHPAK+ Sbjct: 242 NALHQFAYVNGRPVRDKQIFGALRGAYSDVIARDRHPVAVLFLTLDPALVDVNVHPAKAD 301 Query: 306 IRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-NAPKTHLPKYATSLTN 364 +RFR+P ++R I+ +I++A+ + GI ++ ++ M+ +F + + P+ A S + Sbjct: 302 VRFRDPGLVRGLIVGAIKQALAQSGIRPATSGAEAMLQAFRAEGFGAQQSAPRPANSYSP 361 Query: 365 TQEKLFLQENRLSTNDLLPSDDP--------------------------TYSEDNDPVEE 398 + R + + + Sbjct: 362 ASWRTAPPAPRSEWSPQTAHPAHRPLDLQAAPAFREDGQAILGDVAAPAADARASVAEAP 421 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 E LG A AQIH+NYI++QT D LVIVDQHAAHERL++E ++ ++ I Q LL Sbjct: 422 VELMQKPLGAARAQIHENYIVAQTEDSLVIVDQHAAHERLVYEALKNALHARPIAGQMLL 481 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 PEI+DL E + + H E L R G+ E+FGP AIA+RE PA+L + N+ QL+RD+ D Sbjct: 482 IPEIVDLPEEDAQRLAGHAETLARFGLGVEQFGPGAIAVRETPAMLGEMNVQQLIRDLAD 541 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 EI + T L+ + ++ ATMAC+GS+RSGR+++ EMN LLR+ME P S CNHGRP Sbjct: 542 EIAEHDTADGLKAMLHHVAATMACHGSVRSGRRLKPEEMNALLRDMEATPGSGTCNHGRP 601 Query: 579 TFIKLKLSDIEKLFGR 594 T+I+LKL+DIE+LFGR Sbjct: 602 TYIELKLTDIERLFGR 617 >gi|326553690|gb|ADZ88329.1| DNA mismatch repair protein [Brucella melitensis M5-90] Length = 618 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 268/616 (43%), Positives = 391/616 (63%), Gaps = 28/616 (4%) Query: 7 SEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSE 66 SE IINQIAAGE+IERP+ IKEL+EN++DA ++R+E V AGGGK+ ++TDNG G+ ++ Sbjct: 2 SETIINQIAAGEVIERPASVIKELVENAIDAGATRIEVVTAGGGKTLLRVTDNGSGIPAD 61 Query: 67 EIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGE 126 E+ +AV RHCTSK++DD +I GFRGEALPSIG+VS LTL SRP ++G ++ ++G Sbjct: 62 ELALAVSRHCTSKLTDDVHDIRALGFRGEALPSIGSVSKLTLKSRPQDADSGFEVCVTGG 121 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 + RP A+N GTIVEVRDLF+ PARL F+K+++ E ITDV++R+ IA+P + F+ Sbjct: 122 HLDGPRPTALNRGTIVEVRDLFYATPARLKFMKTDRAEATAITDVVKRIGIAFPHIRFSL 181 Query: 187 STIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRG 245 + ++M + ERI QV+G +F NA+ ++ + + + L G+ GIP+FNRG Sbjct: 182 AGTDRTPFEMPATGTGAEATLERIGQVLGREFGENALAIDAERDGVRLAGFVGIPSFNRG 241 Query: 246 NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSY 305 NA + ++NGR V+DK I +R AY++ I R+PV VL L +DP VDVNVHPAK+ Sbjct: 242 NALHQFAYVNGRPVRDKQIFGALRGAYSDVIARDRHPVAVLFLTLDPALVDVNVHPAKAD 301 Query: 306 IRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-NAPKTHLPKYATSLTN 364 +RFR+P ++R I+ +I++A+ + GI ++ ++ M+ +F + + P+ A S + Sbjct: 302 VRFRDPGLVRGLIVGAIKQALAQSGIRPATSGAEAMLQAFRAEGFGAQQSAPRPANSYSP 361 Query: 365 TQEKLFLQENRLSTNDLLPSDDP--------------------------TYSEDNDPVEE 398 + R + + + + Sbjct: 362 ASWRTAPPAPRSEWSPQTAQTAHRPLDLQAAPALRENGQAVLGDVAVPASDARASVAEAP 421 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 E LG A AQIH+NYI++QT D LVIVDQHAAHERL++E ++ ++ I Q LL Sbjct: 422 VELMQKPLGAARAQIHENYIVAQTEDSLVIVDQHAAHERLVYEALKNALHARPIAGQMLL 481 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 PEI+DL E + + H E L R G+ E+FGP AIA+RE PA+L + N+ QL+RD+ D Sbjct: 482 IPEIVDLPEEDAQRLAGHAETLARFGLGVEQFGPGAIAVRETPAMLGEMNVQQLIRDLAD 541 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 EI + T L+ + ++ ATMAC+GS+RSGR+++ EMN LLR+ME P S CNHGRP Sbjct: 542 EIAEHDTADGLKAMLHHVAATMACHGSVRSGRRLKPEEMNALLRDMEATPGSGTCNHGRP 601 Query: 579 TFIKLKLSDIEKLFGR 594 T+I+LKL+DIE+LFGR Sbjct: 602 TYIELKLTDIERLFGR 617 >gi|325983238|ref|YP_004295640.1| DNA mismatch repair protein MutL [Nitrosomonas sp. AL212] gi|325532757|gb|ADZ27478.1| DNA mismatch repair protein MutL [Nitrosomonas sp. AL212] Length = 597 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 221/597 (37%), Positives = 330/597 (55%), Gaps = 8/597 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L E +INQIAAGE++ERP+ A+KE++ENS+DA + ++ + GG ++ D+G Sbjct: 3 TIKPLPELLINQIAAGEVVERPAAALKEILENSVDAGAKKINVQLQQGGVKQIRVADDGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+T +E+ +A+ RH TSKIS +D I + GFRGEAL SI A+S LTL SR + Sbjct: 63 GITKDELQLALTRHSTSKISTLEDLHQITSLGFRGEALASIAAISRLTLASREAAQSHAW 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G+ +S P ++ GT ++V DL+F IPAR FLKSE E + +R+A++ Sbjct: 123 QILVEGKSVSQPMPASLAQGTTLDVNDLYFNIPARRKFLKSEATEFAHCDETFKRIALSQ 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F R + G+ +RI+ V+G++F A ++E+S E+ L G + Sbjct: 183 SGIEFVLQHNGKVRRHLRA----GDPAQRIASVLGDEFKQTAAWIDEQSAEMHLHGMVAL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + R + + Y F+N R V DK I +R AY + + L R+P VL L+I P VDVNV Sbjct: 239 PAYARSSRDTQYFFVNHRFVNDKLISHALREAYRDVLHLERHPAFVLFLDIHPGSVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ +RFR P + FI +I KA++ +SS + + Sbjct: 299 HPTKTEVRFREPRALHQFIFHAINKALSSGQKESSSGEPVSIARPYPIYPKTGPAQGGTV 358 Query: 360 TSLTNTQEKLFLQENR--LSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 + + LF E R + + P D + ++ LG A Q+H Y Sbjct: 359 SQPASFYGTLFGTEARSIPTIPVNIAPAAPAIKPDKSIAIGNNQDNHPLGFALGQLHGIY 418 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 I++Q GL++VD HAAHER+++EK++Q + +I Q LL P E A I E+ Sbjct: 419 ILAQNARGLIVVDMHAAHERILYEKLKQALDQHEIPMQPLLIPVTFYAEHLEIAAIEENQ 478 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 L +LG + P +A+R +PA L +I QL RDI+ EI + + L + IL Sbjct: 479 TILDQLGFEIAVLSPTTVAVRAVPATLQHADIAQLARDILREIREYGASQILTAKRNEIL 538 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ATMAC+G+IR+ RK+ EMN LLREME + QCNHGRPT+ + L+D++KLF R Sbjct: 539 ATMACHGAIRANRKLTLEEMNALLREMEMTERADQCNHGRPTWFETSLADLDKLFMR 595 >gi|254473678|ref|ZP_05087074.1| DNA mismatch repair protein [Pseudovibrio sp. JE062] gi|211957390|gb|EEA92594.1| DNA mismatch repair protein [Pseudovibrio sp. JE062] Length = 679 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 258/652 (39%), Positives = 394/652 (60%), Gaps = 58/652 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+LS+ IN+IAAGE+IERP+ +KEL+EN++DA ++R+E V A GGKS +ITDNG Sbjct: 27 MAVRQLSDTTINRIAAGEVIERPASVVKELVENAVDAGATRIEIVTATGGKSLLRITDNG 86 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E++ +AV+RHCTSK+ + D +I T GFRGEALPSIGA+S L + +R Sbjct: 87 AGMTKEDLQLAVRRHCTSKLPENDLMDIRTMGFRGEALPSIGAISRLEITTRHASEPHAW 146 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G + S V P A+N GT VEV+D+FF++PARL FLKS++ E IT++I+R+A+A Sbjct: 147 KIEVEGGQNSEVEPAALNAGTRVEVKDIFFSVPARLKFLKSDRAEATAITEIIKRIALAN 206 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + FT S + ++ + + RI Q++G +F NA+E+ + L GY G+ Sbjct: 207 PTIRFTLSGSDRRQLELPACTGDDADLARIGQILGAEFTKNAMEIEALREGVHLYGYAGL 266 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF+R N+ + F+NGR V+DK +L +++ AY++ + R+P+VVL +++DP QVDVNV Sbjct: 267 PTFHRANSQHQFFFVNGRPVRDKLLLGSLKAAYSDVLSRDRHPIVVLNIDLDPHQVDVNV 326 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ------------ 347 HPAK+ +RFR+ ++R +I +++ A + G S+ ++ I++ Sbjct: 327 HPAKADVRFRDGQLVRGLLIGALKNAFVQSGFRASTANTQSAINAIRPMGQGAGFNVHSG 386 Query: 348 -DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE-------- 398 + + A S + Q +E+ S + E + E Sbjct: 387 ASAHTQQGHREAAQSYSWRQSAYRPEESSASVWSAADIPEAGTQETQLGLMEATAPYTAS 446 Query: 399 ------------------------------------SEATHYQLGIACAQIHQNYIISQT 422 + ++ LG A AQIH+ YI+SQT Sbjct: 447 PEPSMGQDSAAEQGHQAYNLVDAPSADSRAHVHELPEDRENFPLGAARAQIHETYIVSQT 506 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 DGLVIVDQHAAHERL++E++++D + Q LL PEI+DL E + A + E +L Sbjct: 507 KDGLVIVDQHAAHERLVYEQLKEDLAKRDVPRQMLLIPEIVDLPEDDVARLEERASELEE 566 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMAC 542 +G+ ERFGP AIA+RE P++L + NI L++D+ D+ + ++ ++++++ + ATMAC Sbjct: 567 VGLVLERFGPGAIAVRETPSMLKRLNIKALVQDLADDFAEYDSSTRIREKLDLVAATMAC 626 Query: 543 YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +GSIR+GR+M+ EM+ LLR+ME P S QCNHGRPT+I+LKL DIE+LFGR Sbjct: 627 HGSIRAGRRMRPEEMDNLLRDMEATPKSGQCNHGRPTWIELKLHDIERLFGR 678 >gi|163743610|ref|ZP_02150986.1| DNA mismatch repair protein [Phaeobacter gallaeciensis 2.10] gi|161383081|gb|EDQ07474.1| DNA mismatch repair protein [Phaeobacter gallaeciensis 2.10] Length = 650 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 257/635 (40%), Positives = 379/635 (59%), Gaps = 44/635 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA ++R+ IA GGK+ ++TD+G G Sbjct: 16 IRQLDDSAINRIAAGEVVERPASAVKELVENAIDAGATRITIEIADGGKTLIRVTDDGCG 75 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 M+ ++P+A+ RH TSKI D NIHTFGFRGEALPS+GAV L++ SR AQI Sbjct: 76 MSPADLPLALSRHATSKIDGSDLLNIHTFGFRGEALPSLGAVGRLSITSRAKDQE-AAQI 134 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++G + V+P A+ GT+VE+RDLF+ PARL F++S++ ET I DVI+R+A+A P Sbjct: 135 RVAGGRTEPVKPAALRVGTVVELRDLFYATPARLKFMRSDRAETQAIGDVIKRLAMAEPS 194 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQ 234 V FT S R G+ + R++ V+G +F NA++++ + + L Sbjct: 195 VGFTLRDVSGGGEGRVTFRADPLTGDLFDALHGRLATVLGREFAENALKIDATRDGVRLF 254 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG A ++F+N R V+DK + +R AY + + R+P L L+ DP Sbjct: 255 GYAALPTYSRGAAVAQFLFVNTRPVKDKMLTGALRAAYFDFLSRDRHPAAALFLDCDPTL 314 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN----- 349 VDVNVHPAKS +RFR+P + R I+ +++ + + G SS ++ + + + Sbjct: 315 VDVNVHPAKSEVRFRDPGVARGLIVSALRHGLAEAGHRASSTVAGATLGAMRPEPMASQP 374 Query: 350 ----APKTHLPKYATSLTNTQEKLFLQENR-------LSTNDLLPSDDPTYSEDNDPVEE 398 AP+ + + + + + YS E Sbjct: 375 GADGAPRIYQMDRPSLGARSLSYAAQAPGQSCIAGGDMPPPSGFAELAQVYSGRVTEAPE 434 Query: 399 SEATHYQLGIAC-------------------AQIHQNYIISQTTDGLVIVDQHAAHERLI 439 S+ G Q+H+NYII+QT DG+VIVDQHAAHERL+ Sbjct: 435 SQNPAMAPGQPLERSETSAPGAEQLPLGAARGQVHENYIIAQTADGMVIVDQHAAHERLV 494 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +EK+++ T + +Q LL PEI++L EG+CA I+ +DL+R G+ E FG AIA+RE Sbjct: 495 YEKLKRQMAETGVAAQALLIPEIVELSEGDCARILAVADDLNRFGLGIEAFGGGAIAVRE 554 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 PAIL N ++RDI+DE+ D + +Q +IE IL+ +AC+GSIRSGR M+ EMN Sbjct: 555 TPAILGTVNAEAMVRDILDELDDQGESQLVQAKIEAILSRVACHGSIRSGRWMRGEEMNA 614 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LLREME P+S QCNHGRPT+++LKL+DIE+LFGR Sbjct: 615 LLREMEATPHSGQCNHGRPTYVELKLADIERLFGR 649 >gi|83941709|ref|ZP_00954171.1| DNA mismatch repair protein [Sulfitobacter sp. EE-36] gi|83847529|gb|EAP85404.1| DNA mismatch repair protein [Sulfitobacter sp. EE-36] Length = 632 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 258/618 (41%), Positives = 380/618 (61%), Gaps = 27/618 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA + ++ A GGK+ ++TD+G G Sbjct: 15 IRQLDDSAINRIAAGEVVERPASAVKELVENAIDAGARQITVEYADGGKTLIRVTDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + ++++ +A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR + GA+I Sbjct: 75 IAADDLTLALSRHATSKIDGTDLLNIHTFGFRGEALPSLGAVGRLTICSRVAGQD-GAEI 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 +++G VRP A+N GT+V +RDLFF PARL FL++++ E I+D+I+R+A+A P Sbjct: 134 SVNGGVTGPVRPAALNGGTVVTLRDLFFATPARLKFLRTDRAEAQAISDIIKRLAMAEPF 193 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGN----FPERISQVIGEDFINNAVELNEKSNEITLQ 234 V FT S R ++ G+ R++QV+G +F NA+ ++ + + L Sbjct: 194 VRFTLRDVSGDGPGREVFRAEAEQGDMFAALHGRLAQVLGREFAENALAIDAEREGLHLT 253 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG+A Y+F+NGR V+DK ++ +R AY + + R+P L ++ DP+ Sbjct: 254 GYAALPTYSRGSAVTQYLFVNGRPVRDKLLVGALRGAYFDLLSRDRHPAAALFVDCDPKL 313 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAKS +RFR+P + R I+ +++ A+ G S+ ++ + + + Sbjct: 314 VDVNVHPAKSEVRFRDPGLARGLIVSALRHALADAGHRASTTVANATLGAMRPEQPGARV 373 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSD------------------DPTYSEDNDPV 396 SL Q + T + D Sbjct: 374 YQMDRPSLGARSAAYQAQAPEPGFAETAGMWGRVETPPQYEAGGADVQTHDTRTHDAHTP 433 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 A + LG A Q+H+NYII+QT G+VIVDQHAAHERL++EK+++ + +Q Sbjct: 434 AAEPAPDFPLGTARGQVHENYIIAQTATGMVIVDQHAAHERLVYEKLKRQMAENGVAAQA 493 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 LL PEI+DL +CA ++E EDL R G+ E FG +AIA+RE PAIL + ++ DI Sbjct: 494 LLIPEIVDLSASDCARLLEVAEDLARFGLGIEAFGGSAIAVRETPAILGTVDAKAMVLDI 553 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 +DE+ D + + TLQ RIE IL+ +AC+GSIRSGR M+ EMN LLREME P+S QCNHG Sbjct: 554 LDELADQNESNTLQARIEAILSRVACHGSIRSGRWMRGEEMNALLREMEATPHSGQCNHG 613 Query: 577 RPTFIKLKLSDIEKLFGR 594 RPT+++LKLSDIE+LFGR Sbjct: 614 RPTYVELKLSDIERLFGR 631 >gi|300690568|ref|YP_003751563.1| methyl-directed mismatch repair protein [Ralstonia solanacearum PSI07] gi|299077628|emb|CBJ50264.1| methyl-directed mismatch repair protein [Ralstonia solanacearum PSI07] Length = 637 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 199/633 (31%), Positives = 326/633 (51%), Gaps = 47/633 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ +KEL+EN+LDA +++++ + GG ITDNG Sbjct: 10 PIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLQIKLEEGGVRRIAITDNGG 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++E+P+A+ RH TSKI ++ + T GFRGEAL SI +V+ LTL SR ++ Sbjct: 70 GIPADELPVALMRHATSKIGSLEELEAVATLGFRGEALASIASVAELTLTSRTARDAHAT 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + +P + GT V+V+ L+F PAR FLK+EQ E +VIRR A+A Sbjct: 130 QI---IAQTGRTQPASGGIGTTVDVQHLYFNTPARRKFLKTEQTELGHCLEVIRRTALAR 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ + N + + V+G +F + E + E+ L G+ G+ Sbjct: 187 PDVAISVHHNGKPLEHWNAAQADART----AAVLGTEFARARLPFEEAAGELRLFGFAGL 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RG A+ + ++NGR V+D+ + +R+AY + + R+P VL LE+ P VDVNV Sbjct: 243 PTASRGRADHQFFYVNGRFVRDRLLTHAVRSAYEDVLHGDRFPAYVLCLELPPEAVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP+K +RFR+ + F+ ++Q+A+ + L + + Q T P Sbjct: 303 HPSKIEVRFRDSRAVHQFVYHAVQRALARHAGEQGDSLRTDIADAPDQPGTAATPSPADN 362 Query: 357 --KYATSLTNTQEKLFLQENRLST---------------------------------NDL 381 ++ + Q L + + R Sbjct: 363 TTRWINQMAARQTSLGIAQPRAEYLAMMRGGNAPLPSSRPAWMADVPSAATLFDGTAAPA 422 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 + P + + LG A AQ+H Y+++Q G+V+VD HAAHER+++E Sbjct: 423 ADAPVQASIPAAAPPADGSDDEHPLGFAVAQLHGIYVLAQNARGMVLVDMHAAHERILYE 482 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 +++ + ++ Q LL P E E + L LG P +A+R +P Sbjct: 483 QLKTALEARRVEVQPLLIPVTFAASPVEIGTAEEFRDTLTLLGFDISAVSPTTLAVRAVP 542 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 +L K + L RD++ ++ + L +R +LAT+AC+ ++R+ R++ EMN LL Sbjct: 543 TLLQKADAHALARDVLRDLQAYGGSRVLAERQNELLATLACHSAVRANRRLNLDEMNALL 602 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R+ME + QCNHGRPT+I+L ++D+++LF R Sbjct: 603 RQMEATERADQCNHGRPTWIQLTVADLDRLFLR 635 >gi|152996647|ref|YP_001341482.1| DNA mismatch repair protein [Marinomonas sp. MWYL1] gi|150837571|gb|ABR71547.1| DNA mismatch repair protein MutL [Marinomonas sp. MWYL1] Length = 641 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 215/637 (33%), Positives = 354/637 (55%), Gaps = 44/637 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +S+++ + GG +I DNG Sbjct: 3 RINLLSPRLANQIAAGEVVERPASVVKELLENSLDAGASQLDIDVEQGGVRRIKIRDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ RH TSKI DD + T GFRGEAL SI +VS + L S+ Sbjct: 63 GIMKDDLSLALSRHATSKIITLDDLEAVRTLGFRGEALASISSVSRMHLTSQAESEVEAW 122 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ G+ + +++RP + GT +EVRDLFF PAR FL++E+ E + +V++R+A++ Sbjct: 123 RVEAEGKDMATAIRPASHPQGTTIEVRDLFFNTPARRKFLRTEKTEFAHLEEVVKRLALS 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + F S Y + + + R++ ++G+ FI N++ L+ ++ + L G+ G Sbjct: 183 RYETGFRLSHNGKQVYDLRPVTDQLHAEHRLATLLGKKFIENSLTLDVEAAGLRLWGWIG 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL LE+DP VDVN Sbjct: 243 LPTFSRSQADLQYFFVNGRVVKDKLVAHAVRQAYRDVLYNGRHPTFVLYLELDPSTVDVN 302 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K +RFR+ ++ +F+ I KAI + S + +S ++ + +++ + Sbjct: 303 VHPTKHEVRFRDGRLVHDFLFSRIHKAIADVRPESESAPTGMNDTSSNEPVSYGSNITEQ 362 Query: 359 AT-SLTNTQEKLFLQENRLSTNDLLPSD--------DPTYSEDNDPVEESEATHYQLGIA 409 + L+N + R ++N L S+ + V ++E + G Sbjct: 363 SALPLSNRSGSTSMDWMRSTSNSLGSSEVRGQLDGMGRMAGYAQEYVSKTEEIDPETGEI 422 Query: 410 --------------------------------CAQIHQNYIISQTTDGLVIVDQHAAHER 437 AQ+H YI+S++ GL++VD HAAHER Sbjct: 423 REIAPASTLGQSENPLVGREDDYQAVPPLGFAVAQLHGVYILSESEQGLILVDMHAAHER 482 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 +++E+M+ F I+SQ LL P I + + E L+ E E G + ER G + + Sbjct: 483 IVYERMKAAFYQKNISSQPLLVPINIAVSQSEADLVEESGEVFEAFGFRVERTGLESAMV 542 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 RE+P IL + ++ L+RD+I ++ + + ++ R ++A+MAC+G++R+ RK+ EM Sbjct: 543 REVPVILIRGDVEGLVRDVISDLSTNGVSDLMESRANELMASMACHGAVRANRKLTIAEM 602 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N LLR+ME S QCNHGRPT+ L +SD++KLF R Sbjct: 603 NSLLRDMEMTERSGQCNHGRPTWAHLSMSDLDKLFLR 639 >gi|167648022|ref|YP_001685685.1| DNA mismatch repair protein [Caulobacter sp. K31] gi|189030394|sp|B0SWX9|MUTL_CAUSK RecName: Full=DNA mismatch repair protein mutL gi|167350452|gb|ABZ73187.1| DNA mismatch repair protein MutL [Caulobacter sp. K31] Length = 643 Score = 545 bits (1403), Expect = e-152, Method: Composition-based stats. Identities = 238/642 (37%), Positives = 376/642 (58%), Gaps = 48/642 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L + +N+IAAGE++ERP+ AIKEL++N++DA ++R+E GGG + + D+G Sbjct: 1 MPIRRLPPETVNRIAAGEVVERPASAIKELVDNAIDAGATRIEVEAHGGGLTRILVADDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD------DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ 114 G+++EE+P+A++RH TSK++ D IHT GFRGEALPSIG+V+ L++ SR Sbjct: 61 CGLSAEELPVALERHATSKLAPDAQGLWDLLAIHTMGFRGEALPSIGSVARLSISSRAKG 120 Query: 115 NNTGAQIAISGEKISSVRPV--AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 ++ I + G + V P A + G +EVRDLF+ PARL F+KSE+ E IT+ I Sbjct: 121 SSDAWSILVEGGSVGDVAPAAFAGDHGARIEVRDLFYATPARLKFMKSERAEALAITEEI 180 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNF-QSTNGNFPERISQVIGEDFINNAVELNEKSNEI 231 +R A+A V F+ ++ R+S V+G DF +NA+E+++ + + Sbjct: 181 KRQAMANESVGFSLDIDGRRIIRLPPEHPGPQGRLARLSAVLGRDFQDNAIEIDQTRDGV 240 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 L G+ G+PT+NRGNA Y+F+NGR V+D+ + +R AYA+ + R+P L + +D Sbjct: 241 RLTGFAGLPTYNRGNAAHQYLFVNGRPVRDRLLQGALRAAYADFLARDRHPTAALYISLD 300 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD--- 348 +VDVNVHPAK+ +RFR+P ++R I+ +++ A+ G S+ + + + Sbjct: 301 TSEVDVNVHPAKAEVRFRDPALVRGLIVGALRHALAGAGHRASTTTAASALDAIRAQSMV 360 Query: 349 -------NAPKTHLPKYATSLTNTQE-----------------------------KLFLQ 372 P + + + + + ++ Sbjct: 361 PPGAYSGYQPNAYQGGPSPAGFSAWQAGGWTRPSPQVLPGLSDVSARVEPGGYGVAEAVR 420 Query: 373 ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 E D P+ DP + + LG A AQ+H+ YI++QT DG+VIVDQH Sbjct: 421 EAAFGEYDAPPNVAYPGGFSEDPAPVFDPVDFPLGAARAQVHETYIVAQTRDGVVIVDQH 480 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AAHERL++E+M+ + + ++ Q LL PE+++L E ++ E+L LG+ E FGP Sbjct: 481 AAHERLVYERMKGEMAAGRVARQALLLPEVVELDPAEAERVVARAEELAALGLVIESFGP 540 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 A+ +RE PA+L K + L+RDI D++ ++ L++R+E + +TMAC+GS+R+GR++ Sbjct: 541 GAVLVRETPALLGKTDAAGLVRDIADDLAENGQALALKERLEEVCSTMACHGSVRAGRRL 600 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLREME P+S QCNHGRPT+++LKL+DIE+LFGR Sbjct: 601 TGAEMNALLREMEATPHSGQCNHGRPTYVELKLADIERLFGR 642 >gi|119502790|ref|ZP_01624875.1| DNA mismatch repair protein [marine gamma proteobacterium HTCC2080] gi|119461136|gb|EAW42226.1| DNA mismatch repair protein [marine gamma proteobacterium HTCC2080] Length = 614 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 217/610 (35%), Positives = 336/610 (55%), Gaps = 19/610 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L+ ++ NQIAAGE++ERP+ IKE IENSLDA +SR++ + GG ++ DNG Sbjct: 5 RIHRLATRLANQIAAGEVVERPASVIKEAIENSLDAGASRIDIELESGGVQLMRVRDNGQ 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+++E++ +A+ RH TSKI DD + T GFRGEAL SI +VS L+L S + Sbjct: 65 GISAEDLILALARHATSKIDSIDDLEAVGTLGFRGEALASIASVSRLSLTSNASEQGAAG 124 Query: 120 QIAISGEKISSVR--PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 IA S + +V P GT +EVRDLF+ PAR FL++E+ E I +V +R A+ Sbjct: 125 MIAQSEGRDMTVSVSPAPHPRGTTLEVRDLFYNTPARRKFLRTEKTELGHIDEVFKRQAL 184 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+F+ + +N RI+ V G F+ +V L ++ ++L G+ Sbjct: 185 ARSDVAFSLRHNGKTLHSLNCADDQAGRERRIATVCGAAFMEQSVALAREAGRLSLHGWV 244 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+PTF+R A+ Y F+NGR ++DK + I+ AY + + GR+P VL LE+DP VDV Sbjct: 245 GLPTFSRSQADLQYFFVNGRVIRDKLVTHAIKQAYRDVLFHGRHPAYVLFLEVDPAVVDV 304 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RFR + +FI ++ +A+ + + Q+ + P+ Sbjct: 305 NVHPTKHEVRFREGREVHSFIFSTLHRALG--DLRPGDGGAADASGEDAQEGVGWSTTPQ 362 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED-------------NDPVEESEATHY 404 A T Q + L + Y P + E+ Sbjct: 363 QAPMGLLTPPGGHWQPEAQAGTADLDALSRLYKSPTFNRGGHGTPIMEQSPRGDDESEVP 422 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 LG A AQ+H +I+++ +GLV+VD HAAHER+ +E+++Q + + I +Q LL P+ I Sbjct: 423 PLGFALAQLHGVFILAENAEGLVLVDMHAAHERITYERLKQMRDDSGIRTQPLLVPQTIT 482 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L E A +E E L LG+ + G + IRE+P L I L+RD++ +++ Sbjct: 483 LSSREVAAAVEMSEALIALGLVLDATGDEQLVIREVPIALIGGGIEALVRDVLSDMLAFG 542 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 T+ + + +L+TMAC+GS+R+ R++ EMN LLR+ME S QCNHGRPT+++L Sbjct: 543 TSDRIAAHEDELLSTMACHGSVRANRRLTVPEMNALLRDMEMTERSGQCNHGRPTWVQLG 602 Query: 585 LSDIEKLFGR 594 + D++KLF R Sbjct: 603 MQDLDKLFLR 612 >gi|84684369|ref|ZP_01012270.1| DNA mismatch repair protein [Maritimibacter alkaliphilus HTCC2654] gi|84667348|gb|EAQ13817.1| DNA mismatch repair protein [Rhodobacterales bacterium HTCC2654] Length = 610 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 264/601 (43%), Positives = 383/601 (63%), Gaps = 13/601 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA S+R++ A GGK+ ++TD+G G Sbjct: 13 IRQLDDAAINRIAAGEVVERPASAVKELVENTIDAGSTRIDVAYADGGKTLIRVTDDGCG 72 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + +E++P+A+ RH TSKI D +IHTFGFRGEALPS+GAV LT+ SR A I Sbjct: 73 IPAEDLPLAMSRHATSKIDGSDLLDIHTFGFRGEALPSLGAVGRLTITSRCDGA--AASI 130 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++G K VRP A++ GT+VE+RDLFF PARL FL++++ E ITDV++R+A+A P Sbjct: 131 RVAGGKAEPVRPAALSRGTVVELRDLFFATPARLKFLRTDRAEAQAITDVVKRLAMAEPH 190 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPERISQ----VIGEDFINNAVELNEKSNEITLQ 234 + FT S R NG+ + + V+G DF NAV L+ L Sbjct: 191 IGFTLRDVSGGGEGRVTFRAAPENGDLFDALHARLGGVLGRDFAENAVPLDALREGFRLT 250 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG A ++F+NGR V+DK ++ +R AYA+ + R+P L + DP+ Sbjct: 251 GYAALPTYSRGAAVAQFLFVNGRPVRDKLLIGALRGAYADFLSRDRHPAAALFVTCDPKL 310 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKT 353 VDVNVHPAKS +RFR P ++R I+ +I+ A+ + G SS +++ + + + + Sbjct: 311 VDVNVHPAKSEVRFREPGLVRGLIVTTIRHALAEAGHRASSTVAQSTLGAMRPEPTHARV 370 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 + + + + + D E +E+ LG A AQ+ Sbjct: 371 YQMDRPSQVVLHTAREAQSPMGFAETPSARFDPVIEPEPTPETPPAESL--PLGAARAQV 428 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H+NYI++QT DG+VIVDQHAAHERL++EK+++ + SQ LL PEI+DL EG+ +L+ Sbjct: 429 HENYIVAQTEDGMVIVDQHAAHERLVYEKLKRQMAENGVASQALLIPEIVDLSEGDASLL 488 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 + +DL RLG+ E FG AIA+RE PAIL + N ++RDI+DE+ D + TLQ RI Sbjct: 489 LGLADDLARLGLVIEPFGGGAIAVRETPAILGQVNAEAMIRDILDELADLGQSQTLQARI 548 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E +L+ +AC+GSIRSGR M+ EMN LLREME P+S QCNHGRPT+++LKL+DIE+LFG Sbjct: 549 EAVLSRVACHGSIRSGRWMRPEEMNALLREMEATPHSGQCNHGRPTYVELKLADIERLFG 608 Query: 594 R 594 R Sbjct: 609 R 609 >gi|209886353|ref|YP_002290210.1| DNA mismatch repair protein [Oligotropha carboxidovorans OM5] gi|229486325|sp|B6JIV1|MUTL_OLICO RecName: Full=DNA mismatch repair protein mutL gi|209874549|gb|ACI94345.1| DNA mismatch repair protein [Oligotropha carboxidovorans OM5] Length = 612 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 231/611 (37%), Positives = 366/611 (59%), Gaps = 17/611 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L E+I+N+IAAGE++ERP+ A+KEL+EN++DA +R++ GGG+ ITD+G Sbjct: 1 MPVRQLPEQIVNRIAAGEVVERPASAVKELVENAIDAGGTRIDIFTEGGGRRRIVITDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT ++ +AV+RH TSK+ D D I T GFRGEALPSI +V+ L + +R Sbjct: 61 SGMTQGDLALAVERHATSKLDDEDLLRIRTLGFRGEALPSISSVAKLAITTRHAAEPHAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + S++ P A+ GT VEV DLF+ PARL FLK+++ E I +V+RR+A+A Sbjct: 121 AVEVDAGAKSAIAPAALQRGTRVEVSDLFYATPARLKFLKTDRTEAEAIREVVRRLAMAR 180 Query: 180 PKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P ++FT + + R+ ++G DF +A+E+ + ++++G+ Sbjct: 181 PDIAFTLAGEERAPVTWAAALPGAPGRLTRLGDILGSDFRTHAIEVGSEREGVSVEGFAA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P+ R NA Y+F+NGR V+DK IL +R AYA+ +P R+P+V L + +DP++VD N Sbjct: 241 APSLTRANALGQYLFVNGRPVRDKLILGAVRAAYADYLPRDRHPIVALFVTLDPQEVDAN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS-----------FHQ 347 VHPAK+ +RFRN ++R I+ +++ + ++G T++ + I++ F + Sbjct: 301 VHPAKTEVRFRNAGLVRALIVHALKDGLAREGRRTAANTNGAAITTAFRTEGFSREGFAR 360 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 ++ P+ ++ + Q + ++ + + D LG Sbjct: 361 ESLPRGGYDWRSSPAAPWPPQAAAQAPAMGFDESAQAAFDAGAPSADTRGNEAPLGDALG 420 Query: 408 IACA----QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 QIH+NYI++QT DGL++VDQHAAHER+++E+++ + Q LL PEI+ Sbjct: 421 RPLGAARTQIHENYIVAQTNDGLILVDQHAAHERIVYERLKASLTKNGVARQMLLIPEIV 480 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 ++ E ++ +L + G+ E FGP A+A+RE PA+L K N LLRD+ + + + Sbjct: 481 EMDEASVEKLLARASELEKYGLSIESFGPGAVAVRETPALLGKANAASLLRDLAEHMAEW 540 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 L+ R+ ++ ATMAC+GS+RSGR ++ EMN LLREME PNS QCNHGRPT+++L Sbjct: 541 DEALPLERRLMHVAATMACHGSVRSGRILKVEEMNALLREMEATPNSGQCNHGRPTYVEL 600 Query: 584 KLSDIEKLFGR 594 KL+DIEKLFGR Sbjct: 601 KLADIEKLFGR 611 >gi|74317535|ref|YP_315275.1| DNA mismatch repair protein MutL [Thiobacillus denitrificans ATCC 25259] gi|123759071|sp|Q3SIQ5|MUTL_THIDA RecName: Full=DNA mismatch repair protein mutL gi|74057030|gb|AAZ97470.1| DNA mismatch repair protein [Thiobacillus denitrificans ATCC 25259] Length = 598 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 193/607 (31%), Positives = 330/607 (54%), Gaps = 24/607 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS+ +I+QIAAGE++ERP+ A+KE++ENSLDA ++ ++ + GG +++D+G Sbjct: 1 MSIQVLSDVLISQIAAGEVVERPAAALKEILENSLDAGATAIDVELEQGGVKRIRVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ D + + GFRGEAL SI +V+ + L SR ++ Sbjct: 61 VGIPRDELALALTRHATSKIATLADLEQVASLGFRGEALASIASVARVRLTSRHAGSDHA 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I + G + P A + GT +++ D+FF PAR FLK+E E + +RR+A+A Sbjct: 121 WTIHVDGGPLQPSSPAARSGGTTIDIEDMFFNTPARRKFLKTEATEYAHCAETVRRLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P+V+FT + ++ ++ R+ V+GE F +A+ ++ + + L G+ Sbjct: 181 WPQVAFTLVHNGRAQLRLKAEAAAA----RVRHVLGEVFEQHAIAVDAAAGALRLSGWVV 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P + + +VF+NGR V+DK I+ +R AY + + P L +E+ P VDVN Sbjct: 237 RPVAATASRDAQHVFVNGRYVRDKLIVHALREAYRDVLHHQLNPAYCLFVELPPEHVDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI-----------STSSVLSKKMISSFHQ 347 VHPAK+ IRFR+ + F+ ++++ + + + ++ S Sbjct: 297 VHPAKTEIRFRDSRGVHQFLYHAVERLLAAPVAPAAPPSGPDARPPTFLQPRQAAMSLQV 356 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 + A + P A + E + + + ++ D+ V LG Sbjct: 357 EEAMAFYAPFAAMAPGEGDEARHVPQASAAGLAGRAGPPRAFASDSSAVPP-------LG 409 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 A Q+H Y+++Q GLV+VD HAAHER+++EK++ + + +Q LL P + Sbjct: 410 YALGQLHGVYVLAQNAHGLVLVDMHAAHERVVYEKLKTALDRRAVPAQALLIPVALTADP 469 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 E A I H + L +G + PN++A+R +P++L + +L R I+ EI + Sbjct: 470 REVAEIAPHLDQLREIGFELSITSPNSVAVRAVPSLLKNADPVELTRAILAEIAEFGVAR 529 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 L +R +LAT+AC+G++R+ R + EMN LLREME + QCNHGRPT+ +L+L + Sbjct: 530 LLAERRNELLATLACHGAVRAHRTLSVPEMNALLREMEATERAGQCNHGRPTWFQLRLDE 589 Query: 588 IEKLFGR 594 ++ +F R Sbjct: 590 LDAMFMR 596 >gi|207721715|ref|YP_002252154.1| DNA mismatch repair protein MutL [Ralstonia solanacearum MolK2] gi|206586877|emb|CAQ17462.1| dna mismatch repair protein mutl [Ralstonia solanacearum MolK2] Length = 644 Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats. Identities = 202/636 (31%), Positives = 327/636 (51%), Gaps = 50/636 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ +KEL+EN+LDA +++++ + GG ITDNG Sbjct: 14 PIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLQIKLEEGGVRRIAITDNGG 73 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A+ RH TSKI ++ ++ T GFRGEAL SI +V+ LTL SR Sbjct: 74 GIPVDELPVALMRHATSKIGSLEELESVATLGFRGEALASIASVAELTLTSRTADAAHAT 133 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ +P + GT V+V+ L+F PAR FLKSEQ E +VIRR A+A Sbjct: 134 QILAQSGRL---QPASGGVGTTVDVQHLYFNTPARRKFLKSEQTELGHCLEVIRRTALAR 190 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ + N R + V+G +F + E + E+ L G+ G+ Sbjct: 191 PDVAISVHHNGKPLEHWNA----AQADTRTAAVLGTEFARARLPFEEAAGELRLFGFAGL 246 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RG A+ + ++NGR V+D+ + +R+AY + + R+P VL LE+ P VDVNV Sbjct: 247 PTASRGRADHQFFYVNGRFVRDRLLTHAVRSAYEDVLHGDRFPAYVLCLELPPEAVDVNV 306 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP+K +RFR+ + F+ ++Q+A+++ L + + P T Sbjct: 307 HPSKIEVRFRDSRAVHQFVYHAVQRALSRHAGEQGDSLRTDIAEAADAPGQPGTTATPAP 366 Query: 360 TSLTNTQ--------------------------EKLFLQENRLSTNDLLPSDDPTYSEDN 393 T L +R + +PS + Sbjct: 367 ADNTTRWINQMAARQTSLGIAQPRAEYLAMMRGSSTPLPSSRPAWMADVPSTATLFDGAT 426 Query: 394 DPVEESEATH---------------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 +E+ + LG A AQ+H Y+++Q G+V+VD HAAHER+ Sbjct: 427 ATTDEAPVQAPVPVAAPQTDDADDAHPLGFAIAQLHGIYVLAQNARGMVLVDMHAAHERI 486 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 ++E+++ + ++ Q LL P + E E + L LG P +A+R Sbjct: 487 LYEQLKTALEARRVEVQPLLIPVTLAASPVEIGTAEEFRDTLTLLGFDISAVSPTTLAVR 546 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 +P +L K + L RD++ ++ + L +R +LAT+AC+ ++R+ R++ EMN Sbjct: 547 AVPTLLQKADAQALARDVLRDLQAYGGSRVLAERQNELLATLACHSAVRANRRLNLDEMN 606 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LLR+ME + QCNHGRPT+I+L ++D+++LF R Sbjct: 607 ALLRQMEATERADQCNHGRPTWIQLTVADLDRLFLR 642 >gi|83855187|ref|ZP_00948717.1| DNA mismatch repair protein [Sulfitobacter sp. NAS-14.1] gi|83843030|gb|EAP82197.1| DNA mismatch repair protein [Sulfitobacter sp. NAS-14.1] Length = 635 Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats. Identities = 259/621 (41%), Positives = 388/621 (62%), Gaps = 30/621 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ A+KEL+EN++DA + ++ A GGK+ ++TD+G G Sbjct: 15 IRQLDDSAINRIAAGEVVERPASAVKELVENAIDAGARQITVEYADGGKTLIRVTDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + ++++ +A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR + GA+I Sbjct: 75 IAADDLTLALSRHATSKIDGTDLLNIHTFGFRGEALPSLGAVGRLTICSRVAGQD-GAEI 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 +++G VRP A+N GT+V +RDLFF PARL FL++++ E I+D+I+R+A+A P Sbjct: 134 SVNGGVAGPVRPAALNGGTVVTLRDLFFATPARLKFLRTDRAEAQAISDIIKRLAMAEPF 193 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGN----FPERISQVIGEDFINNAVELNEKSNEITLQ 234 V FT S R ++ G+ R++QV+G +F NA+ ++ + + L Sbjct: 194 VRFTLRDVSGDGPGREVFRAEAEQGDMFAALHGRLAQVLGREFAENALAIDAEREGLHLT 253 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG+A Y+F+NGR V+DK ++ +R AY + + R+P L ++ DP+ Sbjct: 254 GYAALPTYSRGSAVTQYLFVNGRPVRDKLLVGALRGAYFDLLSRDRHPAAALFVDCDPKL 313 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP--- 351 VDVNVHPAKS +RFR+P + R I+ +++ A+ G S+ ++ + + + Sbjct: 314 VDVNVHPAKSEVRFRDPGLARGLIVSALRHALADAGHRASTTVANATLGAMRPEQPGARV 373 Query: 352 ----KTHLPKYATSLTNTQEKLFLQEN-------------RLSTNDLLPSDDPTYSEDND 394 + L + + + E D+ D T+ + Sbjct: 374 YQMDRPSLGARSAAYQAQAPEPGFAETAGMWGRVETPPQYEAGGADVQTHDTQTHDAHDA 433 Query: 395 PVEESE-ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 +E A + LG A AQ+H+NYII+QT G+VIVDQHAAHERL++EK+++ + Sbjct: 434 HTPAAEPAPDFPLGTARAQVHENYIIAQTATGMVIVDQHAAHERLVYEKLKRQMAENGVA 493 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 +Q LL PEI+DL +CA ++E +DL R G+ E FG +AIA+RE PAIL + ++ Sbjct: 494 AQALLIPEIVDLSASDCARLLEVADDLARFGLGIEPFGGSAIAVRETPAILGTVDAKAMV 553 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 DI+DE+ D + + TLQ RIE IL+ +AC+GSIRSGR M+ EMN LLREME P+S QC Sbjct: 554 LDILDELADQNESNTLQARIEAILSRVACHGSIRSGRWMRGEEMNALLREMEATPHSGQC 613 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 NHGRPT+++LKLSDIE+LFGR Sbjct: 614 NHGRPTYVELKLSDIERLFGR 634 >gi|94496337|ref|ZP_01302914.1| DNA mismatch repair protein MutL [Sphingomonas sp. SKA58] gi|94424083|gb|EAT09107.1| DNA mismatch repair protein MutL [Sphingomonas sp. SKA58] Length = 594 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 223/599 (37%), Positives = 351/599 (58%), Gaps = 11/599 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E ++N+IAAGE++ERP+ A+KE++EN+LDA + R+ ++ GG ++ D+G Sbjct: 1 MSIRRLPEHLVNRIAAGEVVERPASALKEIVENALDAGAHRIAVRLSNGGLDRIEVIDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM S E+ +A++RH TSK+ DD N+ T GFRGEALPSI +V+ L++ SRP + G Sbjct: 61 CGMDSGEMALALERHATSKLPDDAIENVATLGFRGEALPSIASVARLSIDSRPRGAD-GW 119 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ + P A+ PGT + V LF +PAR FL+S + E + IRR+A+A+ Sbjct: 120 NRTVDNGQLVAEGPAALPPGTRITVEQLFAKVPARRKFLRSPKAEYAACLNCIRRLAMAH 179 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F+ + ER++ + +N V ++ + I L G + Sbjct: 180 PAVAFSVEHDGRRVLGVQ---EGEAREERVAALTDRQLADNHVIVSLEREGIRLSGVASL 236 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT NRG + Y+F+NGR V+D+ ++ +R AYA+ + R+PVV L L++ +VDVNV Sbjct: 237 PTCNRGVGDHQYLFVNGRPVKDRLLIGALRGAYADMLARDRHPVVALFLDVPAHEVDVNV 296 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ +RFR+P +IR I+ +++A++ +G +S++ + P + P A Sbjct: 297 HPAKTEVRFRDPALIRGMIVSGLRRALDAEGFRAVQHADPAGLSAWRPE--PVSPTPIGA 354 Query: 360 TSLTNTQEKLFLQENRLST----NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 + + T + P + E + LG+A Q+ + Sbjct: 355 MPIFEAAGQPVSYNPSFQTVADRRASFQAPPPQARAEPAAAPAPEGASFPLGVARGQVAR 414 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 YI+++ DGLVIVDQHAAHERL E+MR+ + SQ LL PE+++L E C + Sbjct: 415 TYIVAEAEDGLVIVDQHAAHERLTLERMRRAMEGQGVASQALLLPEVVELDEPACDRLEA 474 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 +L G++ ERFGP+A+ +R PA+L + ++ L+ D+ D++ + +L++R++ Sbjct: 475 RAGELREFGLELERFGPSAMLVRAAPAMLGQSDVQGLVTDLADDLAAYDSALSLKERLDL 534 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + ATMAC+GS+R+GR + EMN LLREME P S QCNHGRPT++KL DIEKLFGR Sbjct: 535 VAATMACHGSVRAGRVLSVAEMNALLREMEVTPRSGQCNHGRPTWVKLGHGDIEKLFGR 593 >gi|299065825|emb|CBJ37004.1| methyl-directed mismatch repair protein [Ralstonia solanacearum CMR15] Length = 636 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 204/632 (32%), Positives = 331/632 (52%), Gaps = 46/632 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ +KEL+EN+LDA +++++ + GG ITDNG Sbjct: 10 PIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLQIKLEEGGVRRIAITDNGG 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A+ RH TSKI ++ ++ T GFRGEAL SI +V+ LTL SR Q+ Sbjct: 70 GIPVDELPVALMRHATSKIGSLEELESVATLGFRGEALASIASVAELTLTSRTAQDAHAT 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ +P + GT V+V+ L+F PAR FLK+EQ E +VIRR A+A Sbjct: 130 QIIAQTGRV---QPASGGVGTTVDVQHLYFNTPARRKFLKTEQTELGHCLEVIRRTALAR 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ + N R + V+G +F + E + E+ L G+ G+ Sbjct: 187 PDVAISVHHNGKPLEHWNA----AQADMRTAAVLGTEFARARLPFEEAAGELRLFGFAGL 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RG A+ + ++NGR V+D+ + +R+AY + + R+P VL LE+ P VDVNV Sbjct: 243 PTASRGRADHQFFYVNGRFVRDRLLTHAVRSAYEDVLHGDRFPAYVLCLELPPEAVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA---PKTHLP 356 HP+K +RFR+ + F+ ++Q+A+++ L + + Q A P + Sbjct: 303 HPSKIEVRFRDSRAVHQFVYHAVQRALSRHAGEQGDSLRTDIADAPEQPGATATPADNTT 362 Query: 357 KYATSLTNTQEKLFLQENRL---------STNDLLPSDDPTYSEDND------------- 394 ++ + Q L + + R ST + Sbjct: 363 RWVNQMAARQTSLGIAQPRAEYLAMMRGGSTPQPPSRPAWMADVPSAATLFDGAADAPAD 422 Query: 395 ------------PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 P + + LG A AQ+H Y+++Q G+V+VD HAAHER+++E+ Sbjct: 423 AAPAQASEPAAAPQADDSDDAHPLGFAVAQLHGIYVLAQNARGMVLVDMHAAHERILYEQ 482 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 ++ + +I Q LL P E E + L LG P +A+R +P Sbjct: 483 LKTALEAKRIEVQPLLIPVTFAASAVEIGTAEEFCDTLDLLGFDISAVSPTTLAVRAVPT 542 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 +L K + L RD++ ++ + L +R +LAT+AC+ ++R+ R++ EMN LLR Sbjct: 543 LLQKADAQALARDVLRDLQAYGGSRVLAERQNELLATLACHSAVRANRRLNLDEMNGLLR 602 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +ME + QCNHGRPT+I+L ++D+++LF R Sbjct: 603 QMEATERADQCNHGRPTWIQLTVADLDRLFLR 634 >gi|300703174|ref|YP_003744776.1| methyl-directed mismatch repair protein [Ralstonia solanacearum CFBP2957] gi|299070837|emb|CBJ42138.1| methyl-directed mismatch repair protein [Ralstonia solanacearum CFBP2957] Length = 644 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 200/636 (31%), Positives = 328/636 (51%), Gaps = 50/636 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ +KEL+EN+LDA +++++ + GG ITDNG Sbjct: 14 PIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLQIKLEEGGVRRIAITDNGG 73 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A+ RH TSKI ++ ++ T GFRGEAL SI +V+ LTL SR Sbjct: 74 GIPVDELPVALMRHATSKIGSLEELESVATLGFRGEALASIASVAELTLTSRTADAAHAT 133 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ +P + GT V+V+ L+F PAR FLKSEQ E +VIRR A+A Sbjct: 134 QILAQSGRL---QPASGGVGTTVDVQHLYFNTPARRKFLKSEQTELGHCLEVIRRTALAR 190 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ + N R + V+G +F + E + E+ L G+ G+ Sbjct: 191 PDVAISVHHNGKPLEHWNA----AQADTRTAAVLGTEFARARLPFEEAAGELRLFGFAGL 246 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RG A+ + ++NGR V+D+ + +R+AY + + R+P VL LE+ P VDVNV Sbjct: 247 PTASRGRADHQFFYVNGRFVRDRLLTHAVRSAYEDVLHGDRFPAYVLCLELPPEAVDVNV 306 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT------ 353 HP+K +RFR+ + F+ ++Q+A+++ L + + P T Sbjct: 307 HPSKIEVRFRDSRAVHQFVYHAVQRALSRHAGEQGDSLRTDIAEAADAPGQPGTAATPTP 366 Query: 354 --HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE-------------------- 391 + ++ + Q L + + R ++ Sbjct: 367 ADNTTRWINQMAARQTSLGIAQPRAEYLAMMRGSSTPLPSSRPAWMADVPSAATLFDGAA 426 Query: 392 -------------DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 P + + LG A AQ+H Y+++Q G+V+VD HAAHER+ Sbjct: 427 DDADEAPVQAPVPVAAPQTDDADDAHPLGFAIAQLHGIYVLAQNARGMVLVDMHAAHERI 486 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 ++E+++ + ++ Q LL P + E E + L LG P +A+R Sbjct: 487 LYEQLKTALEARRVEVQPLLIPVTLAASPVEIGTAEEFRDTLTLLGFDISAVSPTTLAVR 546 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 +P +L K + L RD++ ++ + L +R +LAT+AC+ ++R+ R++ EMN Sbjct: 547 AVPTLLQKADAQALARDVLRDLQAYGGSRVLAERQNELLATLACHSAVRANRRLNLDEMN 606 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LLR+ME + QCNHGRPT+I+L ++D+++LF R Sbjct: 607 ALLRQMEATERADQCNHGRPTWIQLTVADLDRLFLR 642 >gi|294853233|ref|ZP_06793905.1| DNA mismatch repair protein mutL [Brucella sp. NVSL 07-0026] gi|294818888|gb|EFG35888.1| DNA mismatch repair protein mutL [Brucella sp. NVSL 07-0026] Length = 618 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 267/616 (43%), Positives = 389/616 (63%), Gaps = 28/616 (4%) Query: 7 SEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSE 66 SE IINQIAAGE+IERP+ IKEL+EN++DA ++R+E V AGGGK+ ++TDNG G+ ++ Sbjct: 2 SETIINQIAAGEVIERPASVIKELVENAIDAGATRIEVVTAGGGKTLLRVTDNGSGIPAD 61 Query: 67 EIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGE 126 E+ +AV RHCTSK++DD +I GFRGEALPSIG+VS LTL S P ++G ++ ++G Sbjct: 62 ELALAVSRHCTSKLTDDVHDIRALGFRGEALPSIGSVSKLTLKSHPQDADSGFEVCVTGG 121 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 + RP A+N GTIVEVRDLF+ PARL F+K+++ E ITDV++R+ IA+P + F+ Sbjct: 122 HLDGPRPTALNRGTIVEVRDLFYATPARLKFMKTDRAEATAITDVVKRIGIAFPHIRFSL 181 Query: 187 STIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRG 245 + ++M + ERI QV+G +F NA+ ++ + + + L G+ GIP+FNRG Sbjct: 182 AGTDRTPFEMPATGTGAEATLERIGQVLGREFGENALAIDAERDGVRLAGFVGIPSFNRG 241 Query: 246 NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSY 305 NA + ++NGR V+DK I +R AY++ I R+PV VL L +DP VDVNVHPAK+ Sbjct: 242 NALHQFAYVNGRPVRDKQIFGALRGAYSDVIARDRHPVAVLFLTLDPALVDVNVHPAKAD 301 Query: 306 IRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-NAPKTHLPKYATSLTN 364 +RFR+P ++R I+ +I++A+ + GI ++ ++ M+ +F + + P+ A S + Sbjct: 302 VRFRDPGLVRGLIVGAIKQALAQSGIRPATSGAEAMLQAFRAEGFGAQQSAPRPANSYSP 361 Query: 365 TQEKLFLQENRLSTNDLLPSDDPTY--------------------------SEDNDPVEE 398 + R + + + Sbjct: 362 ASWRTAPPAPRSEWSPQTAHPAHRPLDLQAAPALRENGQAVLGDVAVPAADARASVAEAP 421 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 E LG A AQIH+NYI++QT D LVIVDQHAAHERL++E ++ ++ I Q LL Sbjct: 422 VELMQKPLGAARAQIHENYIVAQTEDSLVIVDQHAAHERLVYEALKNALHARPIAGQMLL 481 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 PEI+DL E + + H E L R G+ E+FGP AIA+RE PA+L + N+ QL+RD+ D Sbjct: 482 IPEIVDLPEEDAQRLAGHAETLARFGLGVEQFGPGAIAVRETPAMLGEMNVQQLIRDLAD 541 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 EI + T L+ + ++ ATMAC+GS+RSGR+++ EMN LLR+ME P S CNHGRP Sbjct: 542 EIAEHDTADGLKAMLHHVAATMACHGSVRSGRRLKPEEMNALLRDMEATPGSGTCNHGRP 601 Query: 579 TFIKLKLSDIEKLFGR 594 T+I+LKL+DIE+LFGR Sbjct: 602 TYIELKLTDIERLFGR 617 >gi|307941694|ref|ZP_07657049.1| DNA mismatch repair protein MutL [Roseibium sp. TrichSKD4] gi|307775302|gb|EFO34508.1| DNA mismatch repair protein MutL [Roseibium sp. TrichSKD4] Length = 630 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 258/621 (41%), Positives = 385/621 (61%), Gaps = 28/621 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M++R+L E IIN+IAAGE+IERP+ IKEL+EN++DA +S V+ V A GGK+ +++D+G Sbjct: 10 MQVRQLGEAIINRIAAGEVIERPASVIKELVENAIDAGASSVDIVTAAGGKTLMRVSDDG 69 Query: 61 FGMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A++RHCTSKISDD +I T GFRGEALPSIG+V+ L + +R + Sbjct: 70 IGMRRSDLELAIRRHCTSKISDDDLFDIRTLGFRGEALPSIGSVARLAIQTRHSEEENAW 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + G K SS+ P A GT +EVRDLFF PARL FLKS++ E IT+++RR+A+AY Sbjct: 130 TIKVEGGKESSIIPAARTKGTQIEVRDLFFATPARLKFLKSDRAEAAAITEIVRRIALAY 189 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + F+ S + RISQV+G++F++NA+E++ + L G+ G+ Sbjct: 190 PHIGFSLSGSDRQPANWPAARGDEPHLARISQVLGKEFVDNAMEIDAAREGVRLSGFAGL 249 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF+RGNA + F+NGR V+DK +LS +R AYA+ + R+ VVVL +++DP VDVNV Sbjct: 250 PTFHRGNAQHQFFFVNGRPVKDKLLLSGLRGAYADVLARDRHSVVVLFIDLDPAFVDVNV 309 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS-------VLSKKMISSFHQDNAPK 352 HPAK+ +RFR+ ++R ++ SI++A+ + G +S+ + + + + Sbjct: 310 HPAKADVRFRDGQLVRGLLVGSIKQALVQAGHRSSTSNAAAAMDVIRAQGFAPRAPSGSG 369 Query: 353 THLPKYATSLTNTQ-------------------EKLFLQENRLSTNDLLPSDDPTYSEDN 393 P Y +N E+ R + L Sbjct: 370 NATPAYQPQRSNAAWSQDAFRPLEPTARGFSDGEQSVFDAPREAGLSGLSMPSADARAHE 429 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 + E E T LG AQ+H+ YII+QT DG+VIVDQHAAHERL++EK+++ + Sbjct: 430 KQI-EPEKTSLPLGAPRAQVHETYIIAQTDDGVVIVDQHAAHERLVYEKLKESLAKKDVA 488 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 Q LL PEI+++ E + + +H +L +G+ E FGP A+A+RE PAIL NI ++ Sbjct: 489 RQLLLIPEIVEMPEEDVGRLTDHATELEEVGLVLEAFGPGAVAVRETPAILGDMNIKGMV 548 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 ++ DE+ + T L+++++++ ATMAC+GSIR+GR+M+ EM +LLR+ME P S QC Sbjct: 549 LNLADELAEWETASGLKEKLDHVAATMACHGSIRAGRRMRVEEMAQLLRDMEATPLSGQC 608 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 NHGRPT+++LKL DIEKLFGR Sbjct: 609 NHGRPTWVELKLDDIEKLFGR 629 >gi|325128499|gb|EGC51377.1| DNA mismatch repair protein MutL [Neisseria meningitidis N1568] Length = 658 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 212/658 (32%), Positives = 342/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ + GGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRADLTESVGNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 ++ K + + KT Y ++ Q L L+E+R + N Sbjct: 359 DSENLFNRASDYPTGNKPDTRNAFGASGKTAPMPYQSAYAPQQRSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSRFEQARFGNMPSETPAPQTDTPLSDGIPSPSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-KITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ K+ SQ LL P ECA + ++ Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGKLQSQRLLIPVTFAASHEECAALADY 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R +PA+L K ++ L +D+++E+ ++ T+++ I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLNELAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|218768445|ref|YP_002342957.1| DNA mismatch repair protein [Neisseria meningitidis Z2491] gi|20455150|sp|Q9JTS2|MUTL_NEIMA RecName: Full=DNA mismatch repair protein mutL gi|121052453|emb|CAM08789.1| DNA mismatch repair protein [Neisseria meningitidis Z2491] Length = 658 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 212/658 (32%), Positives = 341/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ + GGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E +I R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMIERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ S + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGSGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL-- 381 ++ K + ++ KT Y ++ Q L L+E+R + N Sbjct: 359 DSENLFNRASDYPTGNKPDTRNAFGSSGKTAPMPYQSAYAPQQRSLSLRESRAAMNTYAE 418 Query: 382 ---------LPSDDPTYSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 L + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSQFEQARFGNMPSETPAPKTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + ++ Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPITFAASHEECAALADY 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R +P +L K ++ L RD++ E+ ++ T+++ +I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAVPTMLGKADVVSLARDVLGELAQVGSSQTIEEHENHI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSVRAGRQLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|89056538|ref|YP_511989.1| DNA mismatch repair protein [Jannaschia sp. CCS1] gi|88866087|gb|ABD56964.1| DNA mismatch repair protein MutL [Jannaschia sp. CCS1] Length = 610 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 254/599 (42%), Positives = 379/599 (63%), Gaps = 12/599 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E IN+IAAGE++ERP+ A+KEL+EN++DA++ R+ +A GGK+ ++TD+G G Sbjct: 16 IRQLDEAAINRIAAGEVVERPASAVKELVENAIDADARRIVIEVAHGGKTLIRVTDDGCG 75 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 M + ++P+A+ RH TSKI D NIH+FGFRGEALPS+G+V L++ SR G I Sbjct: 76 MEAADLPLALSRHATSKIDGTDLLNIHSFGFRGEALPSLGSVGRLSITSRASDA--GHMI 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++G +V+P A+N GT+VE+RDLFF PARL FL++++ E ITDV++R+A+A P Sbjct: 134 RVTGGAHDAVKPAALNRGTLVELRDLFFATPARLKFLRTDRAEMQAITDVVKRLAMAEPA 193 Query: 182 VSFTFSTIKS-NRYKMNFQSTNGNFPERIS----QVIGEDFINNAVELNEKSNEITLQGY 236 V FT + R G+ + + ++G DF +NA+ ++ + + L GY Sbjct: 194 VGFTLKDVSDGERVTFRVDPEQGDLFDALRGRLTAIMGRDFTDNALAIDAEREGLRLTGY 253 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 +PT++RG+A ++F+NGR V+DK ++ +R AY + + R+P VL + +VD Sbjct: 254 AALPTYSRGSAVAQFLFVNGRPVRDKLLIGALRAAYMDVLSRDRHPAAVLFIGCPSERVD 313 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHPAKS +RFR P + R+ I+ ++ A+ + G SS ++ +S+ + P Sbjct: 314 VNVHPAKSEVRFREPGVARSLIVTGLRHALAEAGHRASSTVADATLSAMQPAYSEPPSEP 373 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT-HYQLGIACAQIHQ 415 A + Q Q+ + L P +S + V+E+ LG A AQ+H+ Sbjct: 374 LAAPRIY--QMDRLGQQRGFAPVRGLEEAAPQWSAPSARVDEAVIDSDGPLGAARAQVHE 431 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 NYII+QT G+V+VDQHAAHERL++E+++ + Q LL PEI+ L L+ + Sbjct: 432 NYIIAQTPGGIVLVDQHAAHERLVYERLKTQMAERGVARQALLIPEILTLGADADRLL-D 490 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 H +L R G+ E FGP +A+RE PAIL + N LLRDI+DE+ D + TLQ R+E Sbjct: 491 HAAELERFGLVIEAFGPGTVAVRETPAILGEINAEALLRDILDELSDLGDSQTLQARVEA 550 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +L+ +AC+GSIRSGR+M++ EMN LLREME P S QCNHGRPT+++LKL+DIE+LFGR Sbjct: 551 VLSRVACHGSIRSGRQMRADEMNALLREMEATPLSGQCNHGRPTYVELKLADIERLFGR 609 >gi|297538675|ref|YP_003674444.1| DNA mismatch repair protein MutL [Methylotenera sp. 301] gi|297258022|gb|ADI29867.1| DNA mismatch repair protein MutL [Methylotenera sp. 301] Length = 622 Score = 543 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 214/621 (34%), Positives = 327/621 (52%), Gaps = 33/621 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L +++I+QIAAGE++ERP+ A+KEL+ENSLDA S+ + + GG ++ DNG G Sbjct: 4 IHLLPDQLISQIAAGEVVERPASALKELLENSLDAGSTDISVSLVQGGVKQLRVADNGNG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ MA+ RH TSKI+ DD + + GFRGEAL SI +VS + SR + Sbjct: 64 IAQEDLAMALTRHATSKIASLDDLEAVASLGFRGEALASIASVSRTQISSRALDTKHAWR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 IA +G +IS + P A++ GTI+EV DL+F PAR FLK+E E R+ ++ P Sbjct: 124 IASNGSEISPIEPTALDAGTIIEVDDLYFNTPARRKFLKTEGTEFGHCEAAFNRVVLSRP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+F + +R +V+G DF + + E + + + G P Sbjct: 184 DVAFMLQHNGRALSRY----AVSEPTKRFGEVLGADFAAETIAVEESAAGLRIWGVVAKP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TFNR ++ YV++NGR V+DK I IR AY + + R+P VL LE+DP VDVNVH Sbjct: 240 TFNRNKSDTQYVYVNGRFVRDKLISHAIRQAYQDVLHHDRHPAFVLFLELDPNLVDVNVH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKK-GISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 PAK+ +RFR+ I FI S+ KA+ G+S +S ++ + F NA Sbjct: 300 PAKTEVRFRDGQAIHRFIFHSLHKALASPTGVSNASTANQAAYNPFGGQNANSPSYSASP 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN----------------------DPVE 397 Q L E L ++ +N + E Sbjct: 360 YPQYQAQINLSANEPNSFYQTLFSANSAQNYSNNALNNTALQTNRDGLAGGAVFTSNASE 419 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + + LG A AQIH Y+++Q GLV+VD HAAHER+++E+++ ++ + Q L Sbjct: 420 NYAESAFPLGFAVAQIHGVYVLAQNAQGLVVVDMHAAHERIMYEQLKNALDNQAVGMQPL 479 Query: 458 LTPEIIDLLEGECALIME----HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 L P + E A + E +D L +LG P +A+R +P +L + L Sbjct: 480 LLPVSFNADRLEVATVQEALASNDGSLQQLGFDIAIISPTTLAVRAVPTMLQDADAVTLA 539 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 RD++ ++ + + L +R +L TMAC+ ++R+ R + EMN LLR+ME S QC Sbjct: 540 RDVLRDLREYGASRALTERRNELLGTMACHAAVRANRSLTIPEMNALLRDMEATERSGQC 599 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 NHGRPT+ ++ +SD++K+F R Sbjct: 600 NHGRPTWFQVSMSDLDKMFMR 620 >gi|254438381|ref|ZP_05051875.1| DNA mismatch repair protein MutL [Octadecabacter antarcticus 307] gi|198253827|gb|EDY78141.1| DNA mismatch repair protein MutL [Octadecabacter antarcticus 307] Length = 613 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 264/600 (44%), Positives = 392/600 (65%), Gaps = 16/600 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + IN+IAAGE++ERP+ +KELIEN+LDA +SRVE +A GGK+ ++TDNG G Sbjct: 21 IRQLDDAAINRIAAGEVVERPASVVKELIENALDARASRVEVFVADGGKTLIRVTDNGVG 80 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT++++P+A+ RH TSKI D NIH+FGFRGEALPS+GAV LT+ SR G +I Sbjct: 81 MTAQDLPLALSRHATSKIDGSDLLNIHSFGFRGEALPSLGAVGRLTIRSRTDGGE-GCEI 139 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++SG ++VRP A+ GTIVE+RDLF+ PARL FL++++ E I+D ++R+A+A P Sbjct: 140 SVSGGAHTAVRPAALTVGTIVELRDLFYATPARLKFLRTDRAEMQAISDAVKRLAMAEPF 199 Query: 182 VSF--TFSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQG 235 V+F T + ++R G+ + R+ V+G+DF NA+ ++ + L G Sbjct: 200 VTFVLTDVSGGNSRVTFRANGETGDMFDALHARLRSVLGKDFAENALAIDALREGVHLTG 259 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y +PT++RG+A Q ++++NGR V+DK ++ +R AY +T+ R+P L +++DP +V Sbjct: 260 YAALPTYSRGSAVQQFLYVNGRPVRDKVLIGALRGAYMDTLSRDRHPAACLFIDVDPTRV 319 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA-PKTH 354 DVNVHPAKS +RFR+PTI+R I+ +++ A+ G SS ++ + + + P+ + Sbjct: 320 DVNVHPAKSEVRFRDPTIVRGLIVSALRAALADAGHRASSTVASDTLGAMQPEQMEPRIY 379 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 T R S + +D E + + A LG A AQ+H Sbjct: 380 QMDRPTGGIGPAY-------RPSGFADIATDMSGRVEVVEANDGPSAQERPLGAARAQLH 432 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +NYII+QT G+VIVD HAAHERL++EK++ + +Q LL PEII++ G+ A ++ Sbjct: 433 ENYIIAQTETGIVIVDGHAAHERLVYEKLKTQMAENGVAAQALLIPEIIEMSYGDAAQLL 492 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 +DL R G+ E FG NAIA+RE PAIL + N +LRDI+DE+ D ++ +Q+++E Sbjct: 493 AVADDLSRFGLTIEPFGGNAIAVRETPAILGEVNAEAMLRDILDELSDQGSSTLVQEKLE 552 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 IL+ +AC+GSIR+GR M+ EMN LLREME+ P S QCNHGRPT+++LKLSDIE+LFGR Sbjct: 553 AILSRVACHGSIRTGRSMRGEEMNALLREMERTPRSGQCNHGRPTYVELKLSDIERLFGR 612 >gi|325204429|gb|ADY99882.1| DNA mismatch repair protein MutL [Neisseria meningitidis M01-240355] Length = 658 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 217/658 (32%), Positives = 339/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ + GGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E +I R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMIERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++GEDF ++ ++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGEDFQTASLGIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK--------------------------KGIST 333 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGITPAPMSSEN 358 Query: 334 SSVLSKKMISSFHQDNAP----------KTHLPKYATSLTNTQEKLFLQENRLSTNDL-- 381 S S++ N P KT Y + Q L L+E+R + N Sbjct: 359 DSENLFDSASNYPTGNKPDTRNTFGSSGKTAPMPYQAARAPQQRSLSLRESRAAMNTYAE 418 Query: 382 ---------LPSDDPTYSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 L + + E+ G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSQFEQARFGNMPSETPTPQTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-KITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ K+ SQ LL P ECA + ++ Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGKLQSQRLLIPVTFAASHEECAALADY 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R +PA+L K +I L RD++ E+ ++ T+++ I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAVPAMLGKSDIVSLARDVLGELAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|237745903|ref|ZP_04576383.1| DNA mismatch repair protein MutL [Oxalobacter formigenes HOxBLS] gi|229377254|gb|EEO27345.1| DNA mismatch repair protein MutL [Oxalobacter formigenes HOxBLS] Length = 627 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 202/616 (32%), Positives = 337/616 (54%), Gaps = 28/616 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ LS+ +I+QIAAGE++ERPS +KEL+EN++DA +++++ + GG ++DNG Sbjct: 15 TIQLLSDTLISQIAAGEVVERPSAVVKELLENAVDAGATQIDIRLENGGIKRIAVSDNGC 74 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ RH TSKI+ D N+ T GFRGEAL SI +V+ +TL SR + Sbjct: 75 GIAPDQLQLALTRHATSKIASLNDLENVSTLGFRGEALASIASVAEVTLQSRTSEQPHAW 134 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + P + GT V+V +L+ PAR FLKSEQ E +++RR+A+A Sbjct: 135 QIRGNDPSKTL-TPCSGVKGTAVDVHELYANTPARRKFLKSEQTEYGHCAEIVRRIALAR 193 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + FT + + + + + + + + + E S+ ++L G+ G+ Sbjct: 194 PGIRFTLMHNGKVTAQYQADNLSQRCNQILGEAFSQSLLPVDLAAGEDSDRLSLTGFIGL 253 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +R + Y ++NGR V+D+ + +R AY + + RYPV +L L+++P +VDVNV Sbjct: 254 PTASRTRGDMQYFYVNGRFVRDRLLTHAVRAAYEDVLHGNRYPVYLLYLKLEPSRVDVNV 313 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS---------------------TSSVLS 338 HPAK +RFR+ I FI SI + + + S S Sbjct: 314 HPAKIEVRFRDSRAIHQFIYHSISRILARPMEPEPETTGEERPSSIRSPSPPRGPVSWRS 373 Query: 339 KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 +++ + +++ + +L T+EK LQ + D+ P +E Sbjct: 374 APPPAAYRIEQKTESYGALFRDTLRQTEEKRPLQ---IQNPDIPSGTAPALAETGSQKS- 429 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 E + LG A AQ+H YI++Q GLV+VD HAAHER+++EK++ + + +Q+LL Sbjct: 430 GEIDDFPLGFALAQLHDIYILAQNRKGLVLVDMHAAHERIVYEKLKTALDEKTLETQSLL 489 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P + + E E +E+ E L LG P IAIR +P +L + +I +R ++ Sbjct: 490 IPLTLKVGEVEAGTALENRETLLELGFDISALSPETIAIRTVPVLLKQADIATAIRHVLR 549 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + T+ +++ +LAT+AC+ ++R+ R + EMN LLR+MEK + QCNHGRP Sbjct: 550 DLHEYGTSSVTREKRNELLATVACHNAVRANRTLTIPEMNALLRQMEKTERADQCNHGRP 609 Query: 579 TFIKLKLSDIEKLFGR 594 T+ +L LS+++ LF R Sbjct: 610 TWTQLALSELDALFMR 625 >gi|297184247|gb|ADI20365.1| DNA mismatch repair enzyme (predicted ATPase) [uncultured alpha proteobacterium EB080_L27A02] Length = 611 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 263/600 (43%), Positives = 388/600 (64%), Gaps = 12/600 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+LS+ N+IAAGE++ERPS AIKEL+ENS+DA +SR++ + GGK+ ++ DNG G Sbjct: 15 IRQLSDAAANRIAAGEVVERPSSAIKELVENSIDAGASRIDISYSDGGKTLIRVKDNGHG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + ++ +A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR + GA I Sbjct: 75 IAENQLMLALSRHATSKIDGTDLLNIHTFGFRGEALPSMGAVGRLTITSRIENVSMGATI 134 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 + G I VRP + GTIVE+R+LF PARL FL++++ E+ I+DVI+R+A++ P Sbjct: 135 TVDGGVIHQVRPAPSSIGTIVELRNLFHATPARLKFLRTDRAESGAISDVIKRLAMSEPF 194 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQ 234 + FT ++ R G+ + R+S+++G DF N+ ++ + + ITL Sbjct: 195 IGFTLRDITSGGKGRIIFRADPEAGDLFDAMYGRLSKILGIDFAKNSFRVDAERDGITLT 254 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG++ Y+F+NGR V+DK +LS +R AY++ + GRYP+ L +E D + Sbjct: 255 GYASLPTYSRGSSVSQYIFVNGRPVKDKSLLSALRAAYSDFLHNGRYPLAALFVECDFER 314 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAK+ +RFR P I+R +I +++ A+ ++G SS ++ + +F + Sbjct: 315 VDVNVHPAKAEVRFREPGIVRGLVISALRHALAEEGHRASSTVADATLGAFKKSEISNIS 374 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 + + +Q N L + + ++ +LG A AQ+H Sbjct: 375 TNLRMNQSWSRE----MQNNNLDQVGFSELQNNFSARQASIETNNDQISNRLGAARAQVH 430 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +NYIISQT DG+VIVDQHAAHERL++EK++ ++SQTLL PEII+L E + A++M Sbjct: 431 ENYIISQTADGIVIVDQHAAHERLVYEKLKNKMALNGVSSQTLLIPEIIELSEQDSAVLM 490 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 + DL R G+ E FG N+I +RE PAIL + N L+ DI+DE+ D S + ++++++ Sbjct: 491 DLSADLSRFGLSIENFGGNSIVVRETPAILGEVNAKSLILDILDELKDWSESNLIKEKLD 550 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 IL+ +AC+GSIRSGR M+ EMN LLREME P+S QCNHGRPT++KLKL+DIEKLFGR Sbjct: 551 AILSRVACHGSIRSGRIMKGEEMNALLREMEITPHSGQCNHGRPTYVKLKLNDIEKLFGR 610 >gi|114769575|ref|ZP_01447185.1| DNA mismatch repair protein [alpha proteobacterium HTCC2255] gi|114549280|gb|EAU52162.1| DNA mismatch repair protein [alpha proteobacterium HTCC2255] gi|297183941|gb|ADI20062.1| hypothetical protein [uncultured alpha proteobacterium EB080_L11F12] Length = 611 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 263/600 (43%), Positives = 388/600 (64%), Gaps = 12/600 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+LS+ N+IAAGE++ERPS AIKEL+ENS+DA +SR++ + GGK+ ++ DNG G Sbjct: 15 IRQLSDAAANRIAAGEVVERPSSAIKELVENSIDAGASRIDISYSDGGKTLIRVKDNGHG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + ++ +A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR + GA I Sbjct: 75 IAENQLMLALSRHATSKIDGTDLLNIHTFGFRGEALPSMGAVGRLTITSRIENVSMGATI 134 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 + G I VRP + GTIVE+R+LF PARL FL++++ E+ I+DVI+R+A++ P Sbjct: 135 TVDGGVIHQVRPAPSSIGTIVELRNLFHATPARLKFLRTDRAESGAISDVIKRLAMSEPF 194 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQ 234 + FT ++ R G+ + R+S+++G DF N+ ++ + + +TL Sbjct: 195 IGFTLRDITSGGKGRIIFRADPEAGDLFDAMYGRLSKILGIDFAKNSFRVDAERDGMTLT 254 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG++ Y+F+NGR V+DK +LS +R AY++ + GRYP+ L +E D + Sbjct: 255 GYASLPTYSRGSSVSQYIFVNGRPVKDKSLLSALRAAYSDFLHNGRYPLAALFVECDFER 314 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAK+ +RFR P I+R +I +++ A+ ++G SS ++ + +F + Sbjct: 315 VDVNVHPAKAEVRFREPGIVRGLVISALRHALAEEGHRASSTVADATLGAFKKSEISNIS 374 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 + + +Q N L + + ++ +LG A AQ+H Sbjct: 375 TNLRMNQSWSRE----MQNNNLDQVGFSELQNNFSARQASIETNNDQISNRLGAARAQVH 430 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +NYIISQT DG+VIVDQHAAHERL++EK++ ++SQTLL PEII+L E + A++M Sbjct: 431 ENYIISQTADGIVIVDQHAAHERLVYEKLKNKMALNGVSSQTLLIPEIIELSEQDSAVLM 490 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 + DL R G+ E FG N+I +RE PAIL + N L+ DI+DE+ D S + ++++++ Sbjct: 491 DLSADLSRFGLSIENFGGNSIVVRETPAILGEVNAKSLILDILDELKDWSESNLIKEKLD 550 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 IL+ +AC+GSIRSGR M+ EMN LLREME P+S QCNHGRPT++KLKLSDIEKLFGR Sbjct: 551 AILSRVACHGSIRSGRIMKGEEMNALLREMEITPHSGQCNHGRPTYVKLKLSDIEKLFGR 610 >gi|225075177|ref|ZP_03718376.1| hypothetical protein NEIFLAOT_00177 [Neisseria flavescens NRL30031/H210] gi|224953352|gb|EEG34561.1| hypothetical protein NEIFLAOT_00177 [Neisseria flavescens NRL30031/H210] Length = 658 Score = 541 bits (1394), Expect = e-151, Method: Composition-based stats. Identities = 216/658 (32%), Positives = 343/658 (52%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPTQS----LHERIAAIVGDDFQTASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN--------------------------KKGIST 333 HP K+ IRFR+ + + ++ KA+ + Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGVVSTQMPSEN 358 Query: 334 SSVLSKKMISSFHQDNAP----------KTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 S S++ N P KT Y + Q L L+E+R + N Sbjct: 359 DSENLFDSASNYPTGNKPDTRNAFGASGKTAPMPYQAARAPQQRSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATH---------------YQLGIACAQIHQNY 417 T + + E+ LG A AQ+ Y Sbjct: 419 LYKKTDDIDLELNRLEQARFGNMPSETPTPKTDAPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R +PA+L K ++ L +D+++E+ ++ T+++ I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAVPAMLGKSDVVSLAKDVLNELAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|83748955|ref|ZP_00945964.1| MutL [Ralstonia solanacearum UW551] gi|207744182|ref|YP_002260574.1| dna mismatch repair protein mutl [Ralstonia solanacearum IPO1609] gi|83724378|gb|EAP71547.1| MutL [Ralstonia solanacearum UW551] gi|206595587|emb|CAQ62514.1| dna mismatch repair protein mutl [Ralstonia solanacearum IPO1609] Length = 647 Score = 541 bits (1394), Expect = e-151, Method: Composition-based stats. Identities = 199/639 (31%), Positives = 326/639 (51%), Gaps = 53/639 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ +KEL+EN+LDA +++++ + GG ITDNG Sbjct: 14 PIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLQIKLEEGGVRRIAITDNGG 73 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A+ RH TSKI ++ ++ T GFRGEAL SI +V+ LTL SR Sbjct: 74 GIPVDELPVALMRHATSKIGSLEELESVATLGFRGEALASIASVAELTLTSRTADAAHAT 133 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ +P + GT V+V+ L+F PAR FLKSEQ E +VIRR A+A Sbjct: 134 QILAQSGRL---QPASGGVGTTVDVQHLYFNTPARRKFLKSEQTELGHCLEVIRRTALAR 190 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ + N R + V+G +F + E + E+ L G+ G+ Sbjct: 191 PDVAISVHHNGKPLEHWNA----AQADTRTAAVLGTEFARARLPFEEAAGELRLFGFAGL 246 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RG A+ + ++NGR V+D+ + +R+AY + + R+P VL LE+ P VDVNV Sbjct: 247 PTASRGRADHQFFYVNGRFVRDRLLTHAVRSAYEDVLHGDRFPAYVLCLELPPEAVDVNV 306 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM-----------ISSFHQD 348 HP+K +RFR+ + F+ ++Q+A+ + L + Sbjct: 307 HPSKIEVRFRDSRAVHQFVYHAVQRALARHAGEQGDSLRTDIADAADAPDAAGQPGTAAT 366 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE----------------- 391 AP + ++ + Q L + + R ++ Sbjct: 367 PAPADNTTRWINQMAARQTSLGIAQPRSEYLAMMRGSSTPLPSSRPAWMADVPSAATLFD 426 Query: 392 ----------------DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 P + + LG A AQ+H Y+++Q G+V+VD HAAH Sbjct: 427 GAAANADEAPVQAPVPMATPQTDDADDAHPLGFAIAQLHGIYVLAQNARGMVLVDMHAAH 486 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 ER+++E+++ + ++ Q LL P + E E + L LG P + Sbjct: 487 ERILYEQLKTALEARRVEVQPLLIPVTLAASPVEIGTAEEFRDTLTLLGFDISAVSPTTL 546 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 A+R +P +L + + L RD++ ++ + L +R +LAT+AC+ ++R+ R++ Sbjct: 547 AVRAVPTLLQRADAQALARDMLRDLQAYGGSRVLAERQNELLATLACHSAVRANRRLNLD 606 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME + QCNHGRPT+I+L ++D+++LF R Sbjct: 607 EMNALLRQMEATERADQCNHGRPTWIQLTVADLDRLFLR 645 >gi|326387365|ref|ZP_08208974.1| DNA mismatch repair protein MutL [Novosphingobium nitrogenifigens DSM 19370] gi|326208021|gb|EGD58829.1| DNA mismatch repair protein MutL [Novosphingobium nitrogenifigens DSM 19370] Length = 618 Score = 541 bits (1393), Expect = e-151, Method: Composition-based stats. Identities = 221/613 (36%), Positives = 348/613 (56%), Gaps = 24/613 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE++ERP+ A+KEL+EN++DA ++ V ++ GG S ++TD+G G Sbjct: 8 IRRLPEHLVNRIAAGEVVERPASALKELVENAIDAGATHVSVRLSEGGLSLIEVTDDGCG 67 Query: 63 MTSEEIPMAVQRHCTSKISDDF-------SNIHTFGFRGEALPSIGAVSHLTLMSRPPQN 115 M ++E+ +A++RH TSK+ + + T GFRGEALPSI +V+ LT+ SR + Sbjct: 68 MRADEMALALERHATSKLPESLIGEESALERVITLGFRGEALPSIASVARLTIESRSRET 127 Query: 116 NTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 + + + P A+ PGT V V DLF +PAR FL+S + E DV+RR+ Sbjct: 128 GEAWKRVVDHGDLVGDGPAALPPGTRVRVEDLFGRVPARRKFLRSARSEWAAALDVVRRL 187 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A+A P + FT ++ R++Q++ D I+N+V ++ + L G Sbjct: 188 AMARPDIGFTLEHDGRRALQVQ---PGERLDMRVAQLVSRDLISNSVAVDLVRGDYHLIG 244 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 G+PT+NRG A+ Y+F+NGR V+D+ +L +R AYA+ + R+ V+ L L + +V Sbjct: 245 VAGLPTYNRGVADHQYLFVNGRPVRDRLLLGAVRGAYADMLARDRHAVLALFLTLPAEEV 304 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH------QDN 349 DVNVHPAK+ +RFR+ ++R I+ +++A+++ ++ + ++ + Sbjct: 305 DVNVHPAKTEVRFRDSALVRGMIVSGLRQALSEGDRRSAQAPDATAMQAWQVEPVAAPEP 364 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY-------SEDNDPVEESEAT 402 P + + RL + + E Sbjct: 365 VFSPVPPVQSNLFARPASRPAYVPQRLGEAGVAWRGYEAEVMALPEARAEPATAPVPEGE 424 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT-PE 461 + LG+A QI + YI+++ DGLVIVDQHAAHERL+ E++R L PE Sbjct: 425 AHPLGVARGQIGKTYIVAEAADGLVIVDQHAAHERLVLERLRAAGAGEGDAPAQALLLPE 484 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 +++L E +C + E +L R G+ ERFGP A+ IR +PA+L K + L+RD+ D++ Sbjct: 485 VVELDEVDCDRLEEAAHELARFGLILERFGPGAVLIRSVPAMLGKGDPQALVRDVADDLA 544 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 + T + +R++ +LATMAC+GS+R+GR + EMN LLREME+ P S QCNHGRPT++ Sbjct: 545 RNGATLLVGERLDLVLATMACHGSVRAGRVLSVPEMNALLREMEETPRSGQCNHGRPTWV 604 Query: 582 KLKLSDIEKLFGR 594 KL DIEKLFGR Sbjct: 605 KLAHGDIEKLFGR 617 >gi|90419989|ref|ZP_01227898.1| DNA mismatch repair protein MutL [Aurantimonas manganoxydans SI85-9A1] gi|90336030|gb|EAS49778.1| DNA mismatch repair protein MutL [Aurantimonas manganoxydans SI85-9A1] Length = 621 Score = 541 bits (1393), Expect = e-151, Method: Composition-based stats. Identities = 261/621 (42%), Positives = 389/621 (62%), Gaps = 28/621 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++LS+ +I+QIAAGE++ERP+ +KEL+EN+LDA + R+E AGGGK+ +I+D+G Sbjct: 1 MPIQQLSDALIDQIAAGEVVERPASVVKELVENALDAGARRIEIATAGGGKNLIRISDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ + EIP+AV+RHCTSK++ I T GFRGEALPSIG+V L+L SR ++ + Sbjct: 61 CGIPAAEIPLAVRRHCTSKLAGGLDAIGTLGFRGEALPSIGSVGRLSLKSRAAGSDEAYE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + S +RP A++ GT++EVRDLF +PARL FLKS++ E++ IT+++RR+AIA+P Sbjct: 121 ICVEAGRPSELRPTALSRGTVIEVRDLFHAVPARLKFLKSDRAESSAITEIVRRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F S + P I+ V+ DF +NA+ ++ ++ L+G+ GIP Sbjct: 181 GVRFELSGPDRTTTVFEAVPGDAPLPR-IADVLTPDFADNAIPVDAMREDVRLRGFAGIP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T+NRGN Q + ++NGR V+DK + S +R AYA+ + R+PV VL LE+DP VDVNVH Sbjct: 240 TYNRGNGQQQFFYVNGRPVRDKTLHSALRGAYADVLARDRHPVAVLFLELDPALVDVNVH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV----LSKKMISSFHQDNAPKTHLP 356 PAK+ +RFR+P ++R I+ S+++A N+ G+ +++ L + + + AP T P Sbjct: 300 PAKADVRFRDPGLVRGLIVGSLRQAFNEAGLRSATTNSSGLMARFRGAAPAEPAPVTPAP 359 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDP-----------------------TYSEDN 393 + Q + D + Sbjct: 360 RRFDGFAPGGFAAPRQAAYAAEASPYRPLDMGAGATTLDRGPDAGSPAQAPVAIAAPDTE 419 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 + + + + LG A AQ H+N+I+S+T DG+VIVDQHAAHERL++E ++ + + Sbjct: 420 SAEDAANGSDHPLGAAKAQFHRNFIVSETEDGIVIVDQHAAHERLVYEALKTALHGRPLA 479 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 SQ LL PEI+DL E + + E E RLG+ ERFGP A+A+RE PAIL + +L+ Sbjct: 480 SQLLLIPEIVDLPEDDVDRLAEQAETFARLGLGIERFGPGAVAVRETPAILGSVDCQRLM 539 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 RD+ DE+ ++ T ++ RI+++ AT+AC+GS+RSGR M+ EMN LLR+ME P S QC Sbjct: 540 RDLADELAEAGTADAVRGRIDHVAATIACHGSVRSGRLMKPEEMNALLRDMEATPGSGQC 599 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 NHGRPTFI+LKL+DIEK+FGR Sbjct: 600 NHGRPTFIELKLADIEKMFGR 620 >gi|319403683|emb|CBI77268.1| DNA mismatch repair protein MutL [Bartonella rochalimae ATCC BAA-1498] Length = 612 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 269/612 (43%), Positives = 393/612 (64%), Gaps = 19/612 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ +KELIEN++DA +SR+E VIA GGKS +++DNG Sbjct: 1 MIIRHLSETIINQIAAGEVIERPANVVKELIENAIDAGASRIEIVIANGGKSLIRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ +++ +A+ RHCTSKI+DD NI GFRGEALPSIG+VS L L SR +++ A+ Sbjct: 61 CGIPEDQLTLAISRHCTSKITDDVHNICFLGFRGEALPSIGSVSKLKLTSRTKNSDSAAE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ KI +P A NPGTIVEVRDLFF PARL F+KS++ ET ITD I+R+AIA+P Sbjct: 121 IIVNAGKIEGPKPSAANPGTIVEVRDLFFVTPARLKFMKSDRSETITITDTIKRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ + I + N +RI+Q++G++F N++ L+ K + L G+ G+ Sbjct: 181 HIRFSLAGIDRAPMEFPAMEQNTQGQLQRITQIMGKEFAPNSLILDAKRESVHLTGFIGL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNR N+ + ++NGR V+DK + IR AYA+ I R+ V +L + + P VDVNV Sbjct: 241 PSFNRSNSLHQFAYVNGRPVRDKLLWGAIRGAYADVIARDRHAVAILFIHLPPTDVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +RFR+P++IR II +I++A+++ GI +S S+ M+++F + + + Sbjct: 301 HPAKMDVRFRDPSLIRGLIIGAIREALHQTGIRPTSTGSEAMLAAFRTEPLETAKMHQPF 360 Query: 360 TSLTNTQ-----------------EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 + + + QE+ + + L + + + SE Sbjct: 361 SYDARPRHIDPNLTSIFHKPLDINSSIDFQEDTVPIMEHLSTPSGDTRATINALT-SEEL 419 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 HY LG A AQIH+NYI++QT D LVIVDQHAAHERL++E ++ S + SQ LL PEI Sbjct: 420 HYPLGAARAQIHKNYIVAQTQDSLVIVDQHAAHERLVYEALKNALYSKPLPSQLLLIPEI 479 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 ++L E + ++ H + L + G+ E FG AIA+ E P++L + N+ L++D+ DE + Sbjct: 480 VELSEEDATCLLSHKDALKKFGLGIESFGIGAIAVHETPSMLGEINVQALIKDLADEAAE 539 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 T L+ ++ + ATMAC+ SIRSGR + EMN LLR++E PNS+ CNHGRPT+I+ Sbjct: 540 YDTIDNLKGMLDYVAATMACHSSIRSGRLLHPEEMNALLRQIEATPNSATCNHGRPTYIE 599 Query: 583 LKLSDIEKLFGR 594 LKL+DIE+LFGR Sbjct: 600 LKLADIERLFGR 611 >gi|261380220|ref|ZP_05984793.1| DNA mismatch repair protein MutL [Neisseria subflava NJ9703] gi|284797072|gb|EFC52419.1| DNA mismatch repair protein MutL [Neisseria subflava NJ9703] Length = 658 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 212/658 (32%), Positives = 341/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATTIDVELAGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ + + L G Sbjct: 183 PHIAFSLKRDSKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNTLTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRF + + + ++ KA+ Sbjct: 299 HPTKTEIRFHDSQQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 +++ K + + KT Y S Q L L+E+R + N Sbjct: 359 NSENLFDSASNYPTGNKPDTRNAFGPSGKTAPMPYQASRAPQQRSLSLRESRAAMNTYAE 418 Query: 384 SDDPTYSEDNDPVEESEATHYQL--------------------------GIACAQIHQNY 417 T D + + +A + G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSQFEQACFGNMPSETPTPQTDTPLSDGLPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM+ + SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKLQRQENGNLQSQRLLIPVTFAASHEECASLADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R +PA+L K ++ L +D++ E+ ++ T+++ +I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLGELAQVGSSQTIEEHENHI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSVRAGRQLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|121635130|ref|YP_975375.1| DNA mismatch repair protein [Neisseria meningitidis FAM18] gi|166232098|sp|A1KUP6|MUTL_NEIMF RecName: Full=DNA mismatch repair protein mutL gi|120866836|emb|CAM10594.1| DNA mismatch repair protein [Neisseria meningitidis FAM18] gi|325132377|gb|EGC55070.1| DNA mismatch repair protein MutL [Neisseria meningitidis M6190] gi|325138442|gb|EGC61008.1| DNA mismatch repair protein MutL [Neisseria meningitidis ES14902] gi|325198576|gb|ADY94032.1| DNA mismatch repair protein MutL [Neisseria meningitidis G2136] Length = 658 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 217/658 (32%), Positives = 344/658 (52%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSDNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--------------ISTSSVLSKKMISSF 345 HP K+ IRFR+ + + ++ KA+ + V M S Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 346 HQDN----------------------APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 + +N + KT Y ++ Q L L+E+R + N Sbjct: 359 NSENLFDRASNYPTGNKSDTHNAFGSSGKTAPMPYQSAYAPQQRSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSRFEQARFGNMPSETPAPQTDTPLSDGIPSPSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R PA+L K ++ L RD+++E ++ T+++ +I Sbjct: 539 AEALAGFGLELSDMGGNTLAVRAAPAMLGKSDVVSLARDVLNEFAQVGSSQTIEEHENHI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|91775737|ref|YP_545493.1| DNA mismatch repair protein MutL [Methylobacillus flagellatus KT] gi|91709724|gb|ABE49652.1| DNA mismatch repair protein MutL [Methylobacillus flagellatus KT] Length = 613 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 201/615 (32%), Positives = 329/615 (53%), Gaps = 25/615 (4%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I+ L +++I+QIAAGE++ERP+ A+KE++ENSLDA S+ V + GG ++TDN Sbjct: 1 MPSIKLLPDQLISQIAAGEVVERPASALKEILENSLDAGSTDVAVALQAGGIKQIKVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +E+ +A+ RH TSKI+ +D + + GFRGEAL SI A+S + S P Sbjct: 61 GGGIARDELRLALTRHATSKIASLEDLECVASLGFRGEALASIAAISRTQITSYHPDERH 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 +IA G ++ + P A++ GTIV+++DL+F PAR FLK+E E + RR+A+ Sbjct: 121 AWRIASEGSFLTDIEPAALDAGTIVDIQDLYFNTPARRKFLKTENTEFGHCEEAFRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + P V+ ++ S + F + + G++F A L+E + + + G Sbjct: 181 SCPDVNMLLQHNGRAVARLAAGSADKRFEDIL----GQEFAAEAFYLDEVAAGLRVWGMA 236 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 PTF+R + YV++NGR V+DK I IR AY + + R+P VL LE+DP VDV Sbjct: 237 AKPTFSRHARDTQYVYVNGRFVRDKLISHAIRQAYQDVLHHDRHPAFVLFLELDPALVDV 296 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP+K+ +RFR+ + FI ++ K++ S++ A P+ Sbjct: 297 NVHPSKTEVRFRDGQSVHRFIFHALHKSLATPVGLPGSLMPGLATGEKAAAPAQAPSYPR 356 Query: 358 YATSLTNTQEKL--------------FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 + +++ + Q S +D++ + + + + E Sbjct: 357 FQSNIDLRASEASGGFYQALFGNLSQVPQRQAESADDVITAQSTSVATAMGEGGQVEVED 416 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 + LG A AQIH YI++Q GL++VD HAAHER+++EK++ +++++ Q LL P Sbjct: 417 FPLGFAVAQIHGVYILAQNKLGLIVVDMHAAHERIMYEKLKNALDASRVAMQPLLLPVSF 476 Query: 464 DLLEGECALIMEHDED----LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 E A + E L +LG P +A+R IP +L + L RD++ + Sbjct: 477 QADRLEVATVEEQQALAENGLAQLGFDIAVLSPTTLAVRAIPVMLKDADAVALARDVLAD 536 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 + + +R +L TMAC+ ++R+ R + EMN LLR+ME S QCNHGRPT Sbjct: 537 LRQYGASRAFTERRNALLGTMACHAAVRANRTLTIPEMNALLRDMEATERSGQCNHGRPT 596 Query: 580 FIKLKLSDIEKLFGR 594 + ++ + +++K+F R Sbjct: 597 WFQMTMGELDKMFMR 611 >gi|149184476|ref|ZP_01862794.1| DNA mismatch repair enzyme [Erythrobacter sp. SD-21] gi|148831796|gb|EDL50229.1| DNA mismatch repair enzyme [Erythrobacter sp. SD-21] Length = 600 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 219/602 (36%), Positives = 352/602 (58%), Gaps = 11/602 (1%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M IR+L + ++N+IAAGE++ERPS A+KEL+EN++DA +SR+ + GG + ++TD+ Sbjct: 1 MPEIRRLPDTLVNRIAAGEVVERPSSALKELVENAIDAGASRIAVKLVEGGLTSLEVTDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G GM +E+ +A++RH TSK+ D+ + T GFRGEALPSI +V+ TL SRP G Sbjct: 61 GCGMNPDEMALALERHATSKLPDEAIEQVATLGFRGEALPSIASVARFTLESRPRGAEQG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + ++ + P A+ PGT V V +LF IPAR FL++ + E DV++R+A+A Sbjct: 121 WKRVVDHGELVAEGPAALPPGTRVRVENLFAKIPARRKFLRTPRSEYAACLDVVKRLAMA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V+ T + R++QV+ + N V ++ + L G G Sbjct: 181 RPDVAITLDHGDRRILGLQ---GGEGLANRVAQVVARELKENGVAIDLDRGTMRLTGIAG 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PT+NRG A+ Y+F+NGR V+D+ + +R AY++ + R+ V+ L L + P VDVN Sbjct: 238 LPTYNRGIADHQYLFVNGRPVKDRLLTGAVRGAYSDMLARDRHAVLALFLVLPPEMVDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK+ +RFR+ +R FI+ ++ A+ ++ +S + Q+ + P Sbjct: 298 VHPAKTEVRFRDSQAVRGFIVSGLRNALATGDKRSAQTPDASAMSRWQQEPVREEPAPAL 357 Query: 359 AT-----SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 + + Q ++ + +P + + Y LG+A Q+ Sbjct: 358 RSIFEGRDWSTPQTRVSEAGAAWRGYEAEVMAEPRGRAEEAAPAPAAEQDYPLGVARGQV 417 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT-SQTLLTPEIIDLLEGECAL 472 YI+++ DGLV+VDQHAAHERL+ E+++ + SQ LL PE+++L E C Sbjct: 418 ANTYIVAEAKDGLVLVDQHAAHERLVLERLKAAGAEEAVARSQALLIPEVVELEETSCDR 477 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + E + L + G+ ERFGP+A+ +R +P +++ + +LLRDI D++ + L ++ Sbjct: 478 LEEAADTLAKHGLAIERFGPSAMLVRSLPHAIARTDPEKLLRDIDDDLALNGEALHLGEK 537 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 ++ +LATMAC+GS+R+GR ++ EMN LLREME+ P S QCNHGRPT++KL + D+EKLF Sbjct: 538 LDLVLATMACHGSVRAGRTLRVDEMNALLREMERTPRSGQCNHGRPTWVKLSMEDVEKLF 597 Query: 593 GR 594 GR Sbjct: 598 GR 599 >gi|189030396|sp|A9KE32|MUTL_COXBN RecName: Full=DNA mismatch repair protein mutL Length = 574 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 213/596 (35%), Positives = 327/596 (54%), Gaps = 26/596 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L+++ NQIAAGE++ERP+ +KELIENS+DA +S + I GG +I D+G Sbjct: 1 MYIRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A++RH TSKI+ DD +I T GFRGEAL SI AVS LTL SR G Sbjct: 61 DGIHPEDLVLALERHATSKIAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEMG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I+ KI + P A GT ++V+DLF+ PAR FL+S E I +I R+A++ Sbjct: 121 YRISNISHKIMTPVPAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALS 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + F + +T RI ++G+ F+ +A+ + + +TL+GY Sbjct: 181 HFTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIEFSQSGLTLKGYIA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + R + Y+++NGR V+DK I +R AY + + GR+P VL LEIDP VD+N Sbjct: 241 EAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQAYHDVLFHGRHPAYVLYLEIDPAFVDIN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K +RFR+P +R+F+I +++ A+ + + L + N T L + Sbjct: 301 VHPTKHEVRFRDPQWVRDFLIHAVKTALAQAKPGIAHPLPQSTAEYNPITNFAPTPLIEG 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 +L+ QE+ + + LG A AQ+ YI Sbjct: 361 QGNLSLIQEQPAPYTQTI------------------------VHKHPLGHALAQLQGIYI 396 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +SQ GLVIVD HAAHER+++EKM++ + Q+LL P + L E + Sbjct: 397 LSQNEKGLVIVDMHAAHERILYEKMKKQLAEVGLAMQSLLVPINLSLNPQEITAWQTNKA 456 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 RLG + E FGP+ I +R P++L KN+ L+RD++ ++I +TT + +RI LA Sbjct: 457 LFARLGFEIESFGPDKIVVRRHPSLLKPKNLENLIRDVLADLITHNTTSRVGERINAALA 516 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T+AC+ ++R+ + EM LLREMEK + CNHGRPT+ + +++++ F R Sbjct: 517 TLACHAALRAPHYLTIEEMEALLREMEKTEHGGLCNHGRPTWKQFDIAELDTFFLR 572 >gi|126729914|ref|ZP_01745726.1| DNA mismatch repair protein [Sagittula stellata E-37] gi|126709294|gb|EBA08348.1| DNA mismatch repair protein [Sagittula stellata E-37] Length = 629 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 254/622 (40%), Positives = 385/622 (61%), Gaps = 29/622 (4%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 M+ IR+L + +N+IAAGE++ERP+ A+KEL+EN++DA + RV IA GGK+ ++TD Sbjct: 8 MRPVIRQLDDAAVNRIAAGEVVERPASAVKELVENAIDAGARRVGIEIADGGKTLIRVTD 67 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 +G GMT E+P+A+ RH TSKI D +IH+FGFRGEALPS+GAV L+L SR + Sbjct: 68 DGCGMTGAELPLALSRHATSKIDGTDLLDIHSFGFRGEALPSLGAVGRLSLQSRVRG-ES 126 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++++ G +S+V+P A+N GT+V +RDLF+ PARL FL++++ ET I+D ++R+A+ Sbjct: 127 GVELSVEGGVMSAVKPCALNGGTVVTLRDLFYATPARLKFLRTDRAETQAISDTVKRLAM 186 Query: 178 AYPKVSFTFS--TIKSNRYKMNFQSTNGNFPERIS----QVIGEDFINNAVELNEKSNEI 231 A P V FT + +R + G+ + + +++G +F +NA+ + + Sbjct: 187 AEPAVGFTLRDVSGGGDRVTFRVEPETGDLFDALRGRLTRIMGAEFTDNALAVEAEREGF 246 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 L GY +PT++RG A Y+F+NGR V+DK ++ +R AY + + R+P V L ++ D Sbjct: 247 RLTGYAALPTYSRGTAVAQYLFVNGRPVRDKMLIGALRGAYHDFLSRERHPAVALFVDCD 306 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 P +VDVNVHPAKS +RFR+P ++R I+ +++ A+ + G SS ++ + + + P Sbjct: 307 PHKVDVNVHPAKSEVRFRDPGVVRGLIVSTLRHALAEAGHRASSTVAAATLGAMRPEAGP 366 Query: 352 KTHLPKY-ATSLTNTQEKLFLQENRLSTNDLL------------------PSDDPTYSED 392 Q +R S S + Sbjct: 367 AYAPNAPLGAGPEPVSGPRVYQMDRPSLGARAAAYRAQAPAPGFADLGESYSGRVVETAP 426 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + T LG A Q+H+NYII+QT DG+VIVDQHAAHERL++EK+++ + Sbjct: 427 VAEAPAEDVTRRPLGAARGQVHENYIIAQTEDGVVIVDQHAAHERLVYEKLKRQMAENGV 486 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 +Q LL P+++DL + A ++ +DL R+G+ E FG AIA+RE PAIL + + L Sbjct: 487 PAQALLIPDVVDLSADDAARLLAVADDLSRMGLTVEPFGAGAIAVRETPAILGEVDSQGL 546 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 +RDI+DE+ D T +Q++IE IL+ +AC+GSIRSGR M++ EMN LLREME P+S Q Sbjct: 547 IRDILDELDDMGETSLVQEKIEAILSRVACHGSIRSGRVMRAEEMNALLREMEATPHSGQ 606 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+++LKLSDIE+LFGR Sbjct: 607 CNHGRPTYVELKLSDIERLFGR 628 >gi|212212503|ref|YP_002303439.1| DNA mismatch repair protein [Coxiella burnetii CbuG_Q212] gi|226723030|sp|B6J016|MUTL_COXB2 RecName: Full=DNA mismatch repair protein mutL gi|212010913|gb|ACJ18294.1| MutL [Coxiella burnetii CbuG_Q212] Length = 575 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 212/596 (35%), Positives = 328/596 (55%), Gaps = 26/596 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L+++ NQIAAGE++ERP+ +KELIENS+DA +S + I GG +I D+G Sbjct: 2 MYIRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDG 61 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A++RH TSKI+ DD ++ T GFRGEAL SI AVS LTL SR G Sbjct: 62 DGIHPEDLVLALERHATSKIAKIDDLQDVTTLGFRGEALASISAVSRLTLTSRQKNAEMG 121 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I+ KI + P A GT ++V+DLF+ PAR FL+S E I +I R+A++ Sbjct: 122 YRISNISHKIMTPVPAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALS 181 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + F + +T RI ++G+ F+ +A+ + + +TL+GY Sbjct: 182 HFTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIEFSQSGLTLKGYIA 241 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + R + Y+++NGR V+DK I +R AY + + GR+P VL LEIDP VD+N Sbjct: 242 EAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQAYHDVLFHGRHPAYVLYLEIDPAFVDIN 301 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K +RFR+P +R+F+I +++ A+ + + L + N T L + Sbjct: 302 VHPTKHEVRFRDPQWVRDFLIHAVKTALAQTKPGIAHPLPQSTAEYNPITNFAPTPLIEG 361 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 +L+ QE+ + + LG A AQ+ YI Sbjct: 362 QGNLSLIQEQPAPYTQTI------------------------VHKHPLGHALAQLQGIYI 397 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +SQ GLVIVD HAAHER+++EKM++ + Q+LL P + L E + Sbjct: 398 LSQNEKGLVIVDMHAAHERILYEKMKKQLAEVGLVMQSLLVPINLSLNPQEITAWQTNKA 457 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 RLG + E FGP+ I +R P++L KN+ L+RD++ ++I +TT + +RI +LA Sbjct: 458 LFARLGFEIESFGPDKIVVRRHPSLLKPKNLENLIRDVLADLITHNTTSRVGERINAVLA 517 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T+AC+ ++R+ + EM LLREMEK + CNHGRPT+ + +++++ F R Sbjct: 518 TLACHAALRAPHYLTIEEMEALLREMEKTEHGGLCNHGRPTWKQFDIAELDTFFLR 573 >gi|261364762|ref|ZP_05977645.1| DNA mismatch repair protein MutL [Neisseria mucosa ATCC 25996] gi|288567069|gb|EFC88629.1| DNA mismatch repair protein MutL [Neisseria mucosa ATCC 25996] Length = 664 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 218/664 (32%), Positives = 352/664 (53%), Gaps = 75/664 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ +E +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIEVELAGGGIRLIRVSDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR + Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++GEDF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGEDFQAVSLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK-------------------KGISTSSVLSKK 340 HP K+ IRFR+ + + ++ KA+ GI ++ S+ Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTESVGNAGEVLHEITGIRPAATSSEN 358 Query: 341 MISSFHQDNA----------PKTHLPKYATSLTN--------------TQEKLFLQENRL 376 + F Q+ P TH+ + S ++ Q L L+E+R Sbjct: 359 EHNQFLQNPTASSETIFAAVPNTHVSEPRNSFSSGKIAPMPYQAARAPQQRSLSLRESRA 418 Query: 377 STNDLLPSDDPTYSEDND-------------------------PVEESEATHYQLGIACA 411 + N T +++ D ++ + LG A A Sbjct: 419 ALNTYAELFKNTAADEADIELAQFEQARFGSTSATSSETPAHTFSDDPKPELPPLGFAIA 478 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGEC 470 Q+ YI++Q D L+++D HAA ER+ +EKM++ + SQ LL P EC Sbjct: 479 QLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEEC 538 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 A + +H + L G++ G N +A+R +PA+L K ++ L +D++ E+ ++ T++ Sbjct: 539 ATLADHADTLAGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLGELAQVGSSQTIE 598 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 + +ILATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ Sbjct: 599 EHENHILATMSCHGSVRAGRQLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDA 658 Query: 591 LFGR 594 LF R Sbjct: 659 LFLR 662 >gi|329889971|ref|ZP_08268314.1| DNA mismatch repair protein MutL family protein [Brevundimonas diminuta ATCC 11568] gi|328845272|gb|EGF94836.1| DNA mismatch repair protein MutL family protein [Brevundimonas diminuta ATCC 11568] Length = 640 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 233/639 (36%), Positives = 369/639 (57%), Gaps = 45/639 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L + +N+IAAGE++ERP+ AIKEL+EN++DA++ +E GGG + I D+G Sbjct: 1 MTIRRLPPETVNRIAAGEVVERPASAIKELVENAIDADARSIEIQADGGGLTRILIADDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD------FSNIHTFGFRGEALPSIGAVSHLTLMSR--- 111 G+ +E+P+A++RH TSK+ D I T GFRGEALPSIG+V+ L + +R Sbjct: 61 KGIPRDELPVAIERHATSKLEPDDAGDVDLLRIFTLGFRGEALPSIGSVARLNITTRARA 120 Query: 112 ----PPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNL 167 P + + ++ S G VEVRDLF+ PARL F+KSE+ E Sbjct: 121 ETGQPQNDAWAISVEGGAQRPLSPAAFPGPHGARVEVRDLFYATPARLKFMKSERAEAMA 180 Query: 168 ITDVIRRMAIAYPKVSFTFSTIKSNRYKMNF-QSTNGNFPERISQVIGEDFINNAVELNE 226 I++ I+R A+A+ V+FT + ++ + +R+ ++G DF NA+ +++ Sbjct: 181 ISEEIKRQAMAHEAVAFTLTLDGKTTLRLPAEHPGDEGRLKRLGALLGRDFEANALLIDQ 240 Query: 227 KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 + + + L GY G+PT++RGNA ++F+NGR V+D+ + +R AYA+ + R+P L Sbjct: 241 ERDGVRLSGYAGLPTYSRGNAAHQFLFVNGRPVRDRLLQGALRGAYADFLARDRHPAAAL 300 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH 346 ++IDP VDVNVHPAK+ +RFR+P ++R I+ +++ A++ G S+ ++ +S F Sbjct: 301 FIDIDPLYVDVNVHPAKAEVRFRDPALVRGLIVGALRHALHAAGHRASTTVAADALSGFR 360 Query: 347 QDNAPKTHLPKYATSLTNTQEKLF----LQENRLSTNDLLPSDDPTYSEDNDPVEES--- 399 + P + +N + + +L ++ + ++ E+ Sbjct: 361 PHTGDALYNPVAPQTFSNAAPGWSGWQGWSQPAAAAQNLPGLNERSARVEHTWSGEAAVP 420 Query: 400 ------------------------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 + Y LG A AQ+H NYI++QT DGLVIVDQHAAH Sbjct: 421 SFRTLSEIQAEHAGQIAPGASAPVDLIDYPLGAARAQLHANYIVAQTRDGLVIVDQHAAH 480 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 ERL++E+M+ +T Q LLTPE+++L E + E+L +G+ E FG A+ Sbjct: 481 ERLVYERMKAQMADGAVTRQALLTPEVVELDPAEAERVAAKAEELAEMGLIVEAFGAGAV 540 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 +RE PA+L ++ L+RDI D++ + +L++R+ + TMAC+GS+RSGR + + Sbjct: 541 LVRETPALLGDTDVQGLIRDIADDLSEHGAALSLKERMAEVCGTMACHGSVRSGRVLSAP 600 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME P+S QCNHGRPT+++LKL D+EKLFGR Sbjct: 601 EMNALLRQMEATPHSGQCNHGRPTYVELKLHDLEKLFGR 639 >gi|209363988|ref|YP_001424550.2| DNA mismatch repair protein [Coxiella burnetii Dugway 5J108-111] gi|207081921|gb|ABS76590.2| DNA mismatch repair protein [Coxiella burnetii Dugway 5J108-111] Length = 575 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 213/596 (35%), Positives = 327/596 (54%), Gaps = 26/596 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L+++ NQIAAGE++ERP+ +KELIENS+DA +S + I GG +I D+G Sbjct: 2 MYIRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDG 61 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A++RH TSKI+ DD +I T GFRGEAL SI AVS LTL SR G Sbjct: 62 DGIHPEDLVLALERHATSKIAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEMG 121 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I+ KI + P A GT ++V+DLF+ PAR FL+S E I +I R+A++ Sbjct: 122 YRISNISHKIMTPVPAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALS 181 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + F + +T RI ++G+ F+ +A+ + + +TL+GY Sbjct: 182 HFTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIEFSQSGLTLKGYIA 241 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + R + Y+++NGR V+DK I +R AY + + GR+P VL LEIDP VD+N Sbjct: 242 EAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQAYHDVLFHGRHPAYVLYLEIDPAFVDIN 301 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K +RFR+P +R+F+I +++ A+ + + L + N T L + Sbjct: 302 VHPTKHEVRFRDPQWVRDFLIHAVKTALAQAKPGIAHPLPQSTAEYNPITNFAPTPLIEG 361 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 +L+ QE+ + + LG A AQ+ YI Sbjct: 362 QGNLSLIQEQPAPYTQTI------------------------VHKHPLGHALAQLQGIYI 397 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +SQ GLVIVD HAAHER+++EKM++ + Q+LL P + L E + Sbjct: 398 LSQNEKGLVIVDMHAAHERILYEKMKKQLAEVGLAMQSLLVPINLSLNPQEITAWQTNKA 457 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 RLG + E FGP+ I +R P++L KN+ L+RD++ ++I +TT + +RI LA Sbjct: 458 LFARLGFEIESFGPDKIVVRRHPSLLKPKNLENLIRDVLADLITHNTTSRVGERINAALA 517 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T+AC+ ++R+ + EM LLREMEK + CNHGRPT+ + +++++ F R Sbjct: 518 TLACHAALRAPHYLTIEEMEALLREMEKTEHGGLCNHGRPTWKQFDIAELDTFFLR 573 >gi|164685701|ref|ZP_01946749.2| DNA mismatch repair protein MutL [Coxiella burnetii 'MSU Goat Q177'] gi|164601208|gb|EAX32616.2| DNA mismatch repair protein MutL [Coxiella burnetii 'MSU Goat Q177'] Length = 574 Score = 540 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 213/596 (35%), Positives = 327/596 (54%), Gaps = 26/596 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L+++ NQIAAGE++ERP+ +KELIENS+DA +S + I GG +I D+G Sbjct: 1 MYIRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A++RH TSKI+ DD +I T GFRGEAL SI AVS LTL SR G Sbjct: 61 DGIHPEDLVLALERHATSKIAKIDDLQDITTLGFRGEALSSISAVSRLTLTSRQKNAEMG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I+ KI + P A GT ++V+DLF+ PAR FL+S E I +I R+A++ Sbjct: 121 YRISNISHKIMTPVPAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALS 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + F + +T RI ++G+ F+ +A+ + + +TL+GY Sbjct: 181 HFTTEFLLHHNEKEIIHFKPATTISGQENRIKSILGDVFMQSALAIEFSQSGLTLKGYIA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + R + Y+++NGR V+DK I +R AY + + GR+P VL LEIDP VD+N Sbjct: 241 EAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQAYHDVLFHGRHPAYVLYLEIDPAFVDIN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K +RFR+P +R+F+I +++ A+ + + L + N T L + Sbjct: 301 VHPTKHEVRFRDPQWVRDFLIHAVKTALAQAKPGIAHPLPQSTAEYNPITNFAPTPLIEG 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 +L+ QE+ + + LG A AQ+ YI Sbjct: 361 QGNLSLIQEQPAPYTQTI------------------------VHKHPLGHALAQLQGIYI 396 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +SQ GLVIVD HAAHER+++EKM++ + Q+LL P + L E + Sbjct: 397 LSQNEKGLVIVDMHAAHERILYEKMKKQLAEVGLAMQSLLVPINLSLNPQEITAWQTNKA 456 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 RLG + E FGP+ I +R P++L KN+ L+RD++ ++I +TT + +RI LA Sbjct: 457 LFARLGFEIESFGPDKIVVRRHPSLLKPKNLENLIRDVLADLITHNTTSRVGERINAALA 516 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T+AC+ ++R+ + EM LLREMEK + CNHGRPT+ + +++++ F R Sbjct: 517 TLACHAALRAPHYLTIEEMEALLREMEKTEHGGLCNHGRPTWKQFDIAELDTFFLR 572 >gi|328545053|ref|YP_004305162.1| DNA mismatch repair protein mutL [polymorphum gilvum SL003B-26A1] gi|326414796|gb|ADZ71859.1| DNA mismatch repair protein mutL [Polymorphum gilvum SL003B-26A1] Length = 606 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 254/605 (41%), Positives = 382/605 (63%), Gaps = 20/605 (3%) Query: 8 EKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEE 67 E +IN+IAAGE+IERP+ +KEL+EN++DA + VE V A GGK+ +++D+G GMT+ + Sbjct: 3 EAVINRIAAGEVIERPASVVKELVENAVDAGAGMVEIVTAAGGKTLLRVSDDGSGMTAAD 62 Query: 68 IPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGE 126 + +AV+RHCTSKI+D D +I T GFRGEALPSIGAV L++++R +IA+ G Sbjct: 63 LALAVRRHCTSKIADEDLFDIRTLGFRGEALPSIGAVGRLSIVTRHVDEPHAWRIAVEGG 122 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 + + + P A + GT VEVRDLFF PARL FLKS++ E IT+V+RR+A+AYP + F+ Sbjct: 123 RETPLGPAARHRGTQVEVRDLFFATPARLKFLKSDRAEAAAITEVVRRIALAYPHIGFSL 182 Query: 187 STIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGN 246 S RI+Q++G DF++NA+EL+ + + L G+ G+PTF+RG Sbjct: 183 SGADRQAQSWPPARDADPRLARIAQILGRDFVDNALELDAEREGVRLTGFAGLPTFHRGT 242 Query: 247 ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYI 306 A Q + ++NGR V+DK +LS +R AYA+ + R+PV VL LE+DP VDVNVHPAK+ + Sbjct: 243 AQQQFFYVNGRPVKDKLLLSALRGAYADVLARDRHPVAVLFLELDPAHVDVNVHPAKADV 302 Query: 307 RFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS----------------SFHQDNA 350 RFR+ ++R ++ +I++A+ G S+ + + + + Sbjct: 303 RFRDGQLVRGLLVGAIRQALVTAGHRASTANAAAAMDAIRAGGFGGCAAAAEAPYRSPAS 362 Query: 351 PKTHLPKYATSL-TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 ++ F + + D+LP + + EA LG A Sbjct: 363 GAAGWDWRRSAFRPGPAPAGFSEPMQAGLGDVLPLSADARA--GAVPVDEEALRRPLGAA 420 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 AQ+H YII+QT DGLVIVDQHAAHERL++E++++ + + Q LL PEI++L E + Sbjct: 421 RAQVHGTYIIAQTEDGLVIVDQHAAHERLVYERLKEALAARAVARQMLLIPEIVELPEED 480 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 + E +L +G+ E FGP A+A+RE PA+L + +I L+RD+ DE+ + T L Sbjct: 481 VGRLAERAAELESVGLVLEPFGPGAVAVRETPALLGEIDIRGLVRDLADELAEWDTATGL 540 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 ++R++++ ATMAC+GS+R+GR++++ EM+ LLR+ME P S QCNHGRPT+I+LKL DIE Sbjct: 541 KERLDHVAATMACHGSVRAGRRLRAEEMDALLRDMEATPLSGQCNHGRPTWIELKLGDIE 600 Query: 590 KLFGR 594 +LFGR Sbjct: 601 RLFGR 605 >gi|309379702|emb|CBX21691.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 658 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 217/658 (32%), Positives = 343/658 (52%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQKDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ N ERI+ ++G+DF ++E++ S + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPA----QNLHERIAAIVGDDFQTASLEIDSGSGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK--------------------------KGIST 333 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRADLTESVGNAGEVLHDITGVTPAPMPSEN 358 Query: 334 SSVLSKKMISSFHQDNAP----------KTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 S S++ N P KT Y + Q L L+E+R + N Sbjct: 359 DSENLFDSASNYPTGNKPDTRNAFGASGKTAPMPYQAAYAPQQRSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSRFEQARFGNMPSETPAPKTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKM-RQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM RQ + ++ SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRRENGRLQSQRLLIPSTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R +PA+L K ++ L +D+++E+ ++ T+++ I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLNELAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSVRAGRQLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|304387173|ref|ZP_07369416.1| DNA mismatch repair protein MutL [Neisseria meningitidis ATCC 13091] gi|304338740|gb|EFM04851.1| DNA mismatch repair protein MutL [Neisseria meningitidis ATCC 13091] Length = 658 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 214/658 (32%), Positives = 339/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ +E +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIEVELAGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQKDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTESVGNAGEVLHEITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 ++ K + + KT Y + Q L L+E+R + N Sbjct: 359 DSENLFNRASDYPTGNKPDTRNAFGASGKTAPMPYQAARAPQQRSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSRFEQARFGNMPSETPAPQTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + ++ Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPVTFAASHEECAALADY 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R PA+L K ++ L RD++ E+ ++ T+++ I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAAPAMLGKSDVVSLARDVLGELAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|161830565|ref|YP_001596643.1| DNA mismatch repair protein [Coxiella burnetii RSA 331] gi|81839061|sp|Q83CM9|MUTL_COXBU RecName: Full=DNA mismatch repair protein mutL gi|189030397|sp|A9NCK3|MUTL_COXBR RecName: Full=DNA mismatch repair protein mutL gi|161762432|gb|ABX78074.1| DNA mismatch repair protein MutL [Coxiella burnetii RSA 331] Length = 574 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 212/596 (35%), Positives = 326/596 (54%), Gaps = 26/596 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L+++ NQIAAGE++ERP+ +KELIENS+DA +S + I GG +I D+G Sbjct: 1 MYIRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A++RH TSKI+ DD +I T GFRGEAL SI AVS LTL SR G Sbjct: 61 DGIHPEDLVLALERHATSKIAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEMG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I+ KI + P A GT ++V+DLF+ PAR FL+S E I +I R+A++ Sbjct: 121 YRISNISHKIMTPVPAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALS 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + F + +T RI ++G+ F+ +A+ + + +TL+GY Sbjct: 181 HFTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIEFSQSGLTLKGYIA 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + R + Y+++NGR V+DK + +R AY + + GR+P VL LEIDP VD+N Sbjct: 241 EAAYTRSQPDLQYIYVNGRFVRDKLVAQALRQAYHDVLFHGRHPAYVLYLEIDPAFVDIN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K +RFR+P +R+F+I +++ A+ + L + N T L + Sbjct: 301 VHPTKHEVRFRDPQWVRDFLIHAVKTALAQAKPGIVHPLPQSTAEYNPITNFAPTPLIEG 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 +L+ QE+ + + LG A AQ+ YI Sbjct: 361 QGNLSLIQEQPAPYTQTI------------------------VHKHPLGHALAQLQGIYI 396 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +SQ GLVIVD HAAHER+++EKM++ + Q+LL P + L E + Sbjct: 397 LSQNEKGLVIVDMHAAHERILYEKMKKQLAEVGLAMQSLLVPINLSLNPQEITAWQTNKA 456 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 RLG + E FGP+ I +R P++L KN+ L+RD++ ++I +TT + +RI LA Sbjct: 457 LFARLGFEIESFGPDKIVVRRHPSLLKPKNLENLIRDVLADLITHNTTSRVGERINAALA 516 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T+AC+ ++R+ + EM LLREMEK + CNHGRPT+ + +++++ F R Sbjct: 517 TLACHAALRAPHYLTIEEMEALLREMEKTEHGGLCNHGRPTWKQFDIAELDTFFLR 572 >gi|261377459|ref|ZP_05982032.1| DNA mismatch repair protein MutL [Neisseria cinerea ATCC 14685] gi|269146187|gb|EEZ72605.1| DNA mismatch repair protein MutL [Neisseria cinerea ATCC 14685] Length = 658 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 217/658 (32%), Positives = 347/658 (52%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ + GGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELVGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++GEDF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGEDFQTASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGVTPAPMSSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTN---- 379 +++ K + ++ KT Y + Q L L+E+R + N Sbjct: 359 DNENLFDSASNYPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMNTYAE 418 Query: 380 --------DLLPSDDPTYSEDNDPVE--------------ESEATHYQLGIACAQIHQNY 417 DL S N P E S++ LG A AQ+ Y Sbjct: 419 LYKKTDDIDLELSQFEQVRFGNMPSEMLIPQTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-KITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ K+ SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGKLQSQRLLIPVTFAASHEECAALSDH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 + L G++ G N +A+R +PA+L K ++ L +D++ E+ ++ T+++ +I Sbjct: 539 ADALAGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLGELAQVGSSQTIEEHENHI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSVRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|313668557|ref|YP_004048841.1| DNA mismatch repair protein [Neisseria lactamica ST-640] gi|313006019|emb|CBN87478.1| DNA mismatch repair protein [Neisseria lactamica 020-06] Length = 658 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 215/658 (32%), Positives = 340/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATEIDVELAGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR + Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSAHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ N ERI+ ++G+DF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPA----QNLHERIAAIVGDDFQTASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRANLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 ++ K + ++ KT Y + Q L L+E+R + N Sbjct: 359 DSENLFDRASDYPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQRSLSLRESRTAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ A G A AQ+ Y Sbjct: 419 LYKKTGDIDLELSRLEQARFGNMPSETPAPKTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKM-RQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM RQ + ++ SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRRENGRLQSQRLLIPSTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R PA+L K ++ L RD++ E+ ++ T+++ I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAAPAMLGKSDVVSLARDVLGELAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|315500444|ref|YP_004089247.1| DNA mismatch repair protein mutl [Asticcacaulis excentricus CB 48] gi|315418456|gb|ADU15096.1| DNA mismatch repair protein MutL [Asticcacaulis excentricus CB 48] Length = 643 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 233/639 (36%), Positives = 374/639 (58%), Gaps = 47/639 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L + IN+IAAGE++ERP+ AIKEL+EN++DA +++++ GG S I DNG G Sbjct: 4 ISRLPQDTINRIAAGEVVERPASAIKELVENAIDAGATQIDIFAEMGGLSRILIEDNGRG 63 Query: 63 MTSEEIPMAVQRHCTSKISD------DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 M ++++P+AV+RH TSK+ D +I T GFRGEALPS+G+V+ L + SR + Sbjct: 64 MDADDLPLAVERHATSKLKPQADGTWDLLHIQTLGFRGEALPSMGSVARLDITSRAKGMD 123 Query: 117 TGAQIAISGEKISSVRPV--AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRR 174 I + +S +RP + GT VE++DLF+ PARL F+K+++ E I++ ++R Sbjct: 124 GAIAITVDAGAMSPLRPAAFSRPHGTRVELKDLFYATPARLKFMKTDRAENMAISEEVKR 183 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 A+A+ V F+ + ++ + + +R++ ++G+DF +NA+ ++++ + L Sbjct: 184 QAMAHEHVGFSLTLDGKRSLRLYPEEAGFEGRLKRLAALLGDDFGHNALLIDQQREGVRL 243 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 GY G+PTF+RGNA Y+F+NGR V+DK + +R AYA+ + R+P+ VL +E DP+ Sbjct: 244 TGYAGLPTFSRGNAQHQYLFVNGRPVRDKLLTGALRGAYADFLARDRHPMAVLYVETDPQ 303 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH------- 346 +DVNVHPAK+ +RFR+P ++R I+ +++ A+ G ++ ++ + +S+F Sbjct: 304 NIDVNVHPAKAEVRFRDPNLVRGLIVGALKHALASAGHRAATTVADQALSAFSPLSSGYR 363 Query: 347 ------------------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 Q A T + L + D + + Sbjct: 364 APVQPTLSLHSSALGAGYQPRAYATPQQPHPNYQPAWNADLTFAPSARVERDFVAAAPML 423 Query: 389 YSEDNDPVEE-------------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 + + + E E Y LG A AQ+H+ YI++QT DGL+IVDQHAAH Sbjct: 424 QTPGDSGLAEAGGDLRTLSQPLPPEFESYPLGAARAQLHETYILAQTKDGLIIVDQHAAH 483 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 ERL++E+M+ + QTLL PEI+DL + + +M +DL G+ E FGP I Sbjct: 484 ERLVYERMKAMMAEGNVARQTLLIPEIVDLDPADVSRLMARRDDLEGFGLMIESFGPATI 543 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 +RE+PA++ ++ L+RD+ D+I ++ L++R+ I MAC S+R+GR++ + Sbjct: 544 LVREVPALIGDGDVAGLIRDLADDIAENGQALILKERMAEICGNMACRNSVRAGRRLSAS 603 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME P+S QCNHGRPT+++LKL DIEKLFGR Sbjct: 604 EMNALLRQMEATPHSGQCNHGRPTYVELKLKDIEKLFGR 642 >gi|212218528|ref|YP_002305315.1| DNA mismatch repair protein [Coxiella burnetii CbuK_Q154] gi|212012790|gb|ACJ20170.1| DNA mismatch repair protein [Coxiella burnetii CbuK_Q154] Length = 575 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 213/596 (35%), Positives = 327/596 (54%), Gaps = 26/596 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L+++ NQIAAGE++ERP+ +KELIENS+DA +S + I GG +I D+G Sbjct: 2 MYIRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDG 61 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A++RH TSKI+ DD +I T GFRGEAL SI AVS LTL SR G Sbjct: 62 DGIHPEDLVLALERHATSKIAKIDDLQDITTLGFRGEALSSISAVSRLTLTSRQKNAEMG 121 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I+ KI + P A GT ++V+DLF+ PAR FL+S E I +I R+A++ Sbjct: 122 YRISNISHKIMTPVPAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALS 181 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + F + +T RI ++G+ F+ +A+ + + +TL+GY Sbjct: 182 HFTTEFLLHHNEKEIIHFKPATTISGQENRIKSILGDVFMQSALAIEFSQSGLTLKGYIA 241 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + R + Y+++NGR V+DK I +R AY + + GR+P VL LEIDP VD+N Sbjct: 242 EAAYTRSQPDLQYIYVNGRFVRDKLIAQALRQAYHDVLFHGRHPAYVLYLEIDPAFVDIN 301 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K +RFR+P +R+F+I +++ A+ + + L + N T L + Sbjct: 302 VHPTKHEVRFRDPQWVRDFLIHAVKTALAQAKPGIAHPLPQSTAEYNPITNFAPTPLIEG 361 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 +L+ QE+ + + LG A AQ+ YI Sbjct: 362 QGNLSLIQEQPAPYTQTI------------------------VHKHPLGHALAQLQGIYI 397 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +SQ GLVIVD HAAHER+++EKM++ + Q+LL P + L E + Sbjct: 398 LSQNEKGLVIVDMHAAHERILYEKMKKQLAEVGLAMQSLLVPINLSLNPQEITAWQTNKA 457 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 RLG + E FGP+ I +R P++L KN+ L+RD++ ++I +TT + +RI LA Sbjct: 458 LFARLGFEIESFGPDKIVVRRHPSLLKPKNLENLIRDVLADLITHNTTSRVGERINAALA 517 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T+AC+ ++R+ + EM LLREMEK + CNHGRPT+ + +++++ F R Sbjct: 518 TLACHAALRAPHYLTIEEMEALLREMEKTEHGGLCNHGRPTWKQFDIAELDTFFLR 573 >gi|302389748|ref|YP_003825569.1| DNA mismatch repair protein MutL [Thermosediminibacter oceani DSM 16646] gi|302200376|gb|ADL07946.1| DNA mismatch repair protein MutL [Thermosediminibacter oceani DSM 16646] Length = 593 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 198/600 (33%), Positives = 319/600 (53%), Gaps = 19/600 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L E I ++IAAGEIIE+P +KEL+ENS+DA S + I GGKS ++ D+G Sbjct: 3 KIKVLDENISSKIAAGEIIEKPVSVVKELVENSIDAGSRHIFVEIEKGGKSLIKVIDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E++ +A +RH TSKIS DD NI T GFRGEALPSI AVS LT++++ + G Sbjct: 63 GMDPEDVRLAFERHATSKISSLDDIFNIKTLGFRGEALPSIAAVSLLTVLTKTHGSVVGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++G I A+ G V VR++FF PARL FL+S+ E +L+ D++ R AI + Sbjct: 123 KCVLNGGVIEKFEEAAVAEGCCVIVRNIFFNTPARLKFLQSDSREASLVVDLVTRYAIGH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF S ++ + NGN E I+++ G + + + +N+ + + G+ Sbjct: 183 PDISFRLSVDGK---EVLYTPGNGNLKEVIARIYGFNLAKDLIHINKTFDFGRIDGFISP 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + RGN + F+NGR V+D+ + +++ AY +P ++P+ + + ID VDVNV Sbjct: 240 PKYTRGNRSWETFFVNGRLVKDRGLSASLEKAYRTLLPGDKFPIAFIKISIDGSLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK IRF+ + + +++++ + + L + PK A Sbjct: 300 HPAKIEIRFQRENEVHQALYETVKEGLFSNTLVPKEDL------PIPKTTFPKPKNYDGA 353 Query: 360 TSLTNTQEKLFLQ-----ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 + +E+ F + EN+ + + + EE +A Q+ Sbjct: 354 VNENFLKEEYFTRTSGKIENKPVFTETAVPSETKKHSAPNIKEEKKAPEIYFSRILGQLF 413 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 + YI+ Q +VDQHAAHER+++E + + SQ L++P I+ L E I Sbjct: 414 ETYIVVQGNGEFYLVDQHAAHERILYEYYSCGMDL-PVISQELVSPFILKLTFEEINFIE 472 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 E+ + + R+G E FG + + IR +P +K P L++I+DE+ ++ E Sbjct: 473 ENRDFIKRMGFDIEVFGKDTVLIRSVPYFFNKPVEPASLQEIMDELKENGEFRLRS--RE 530 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ILA+MAC+ +I++G + EM LL ++ + N C HGRPT I + L ++EK F R Sbjct: 531 KILASMACHTAIKAGDTLSPDEMRELLDQLMRTQNPYTCPHGRPTMISISLYELEKKFRR 590 >gi|215919100|ref|NP_820082.2| DNA mismatch repair protein [Coxiella burnetii RSA 493] gi|206583985|gb|AAO90596.2| DNA mismatch repair protein [Coxiella burnetii RSA 493] Length = 575 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 212/596 (35%), Positives = 326/596 (54%), Gaps = 26/596 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L+++ NQIAAGE++ERP+ +KELIENS+DA +S + I GG +I D+G Sbjct: 2 MYIRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDG 61 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A++RH TSKI+ DD +I T GFRGEAL SI AVS LTL SR G Sbjct: 62 DGIHPEDLVLALERHATSKIAKIDDLQDITTLGFRGEALASISAVSRLTLTSRQKNAEMG 121 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I+ KI + P A GT ++V+DLF+ PAR FL+S E I +I R+A++ Sbjct: 122 YRISNISHKIMTPVPAAHPQGTTIDVQDLFYNTPARRKFLRSPATEFQHIRRIIERLALS 181 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + F + +T RI ++G+ F+ +A+ + + +TL+GY Sbjct: 182 HFTTEFLLHHNEKEIIHFKSATTISGQENRIKSILGDVFMQSALAIEFSQSGLTLKGYIA 241 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + R + Y+++NGR V+DK + +R AY + + GR+P VL LEIDP VD+N Sbjct: 242 EAAYTRSQPDLQYIYVNGRFVRDKLVAQALRQAYHDVLFHGRHPAYVLYLEIDPAFVDIN 301 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K +RFR+P +R+F+I +++ A+ + L + N T L + Sbjct: 302 VHPTKHEVRFRDPQWVRDFLIHAVKTALAQAKPGIVHPLPQSTAEYNPITNFAPTPLIEG 361 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 +L+ QE+ + + LG A AQ+ YI Sbjct: 362 QGNLSLIQEQPAPYTQTI------------------------VHKHPLGHALAQLQGIYI 397 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +SQ GLVIVD HAAHER+++EKM++ + Q+LL P + L E + Sbjct: 398 LSQNEKGLVIVDMHAAHERILYEKMKKQLAEVGLAMQSLLVPINLSLNPQEITAWQTNKA 457 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 RLG + E FGP+ I +R P++L KN+ L+RD++ ++I +TT + +RI LA Sbjct: 458 LFARLGFEIESFGPDKIVVRRHPSLLKPKNLENLIRDVLADLITHNTTSRVGERINAALA 517 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T+AC+ ++R+ + EM LLREMEK + CNHGRPT+ + +++++ F R Sbjct: 518 TLACHAALRAPHYLTIEEMEALLREMEKTEHGGLCNHGRPTWKQFDIAELDTFFLR 573 >gi|220927109|ref|YP_002502411.1| DNA mismatch repair protein MutL [Methylobacterium nodulans ORS 2060] gi|219951716|gb|ACL62108.1| DNA mismatch repair protein MutL [Methylobacterium nodulans ORS 2060] Length = 621 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 234/610 (38%), Positives = 369/610 (60%), Gaps = 20/610 (3%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R+L ++++IAAGE++ERP+ A+KEL+EN++DA ++ +E I GG+ ++ D+G GM Sbjct: 12 RRLDPVLVDRIAAGEVVERPAAAVKELVENAIDAGATSIEVTIQAGGRRLIRVLDDGIGM 71 Query: 64 TSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 E++ +AV+RH TSK+ + D I T GFRGEALPSIGAV+ L+L+SR + +G + Sbjct: 72 GPEDLALAVERHATSKLPEGDLDRIDTLGFRGEALPSIGAVARLSLVSRTAEAESGHGLV 131 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + VRPVA GT VEV DLF PARL FLKS++ E + +++RR+A+A+P++ Sbjct: 132 VDAGIKGPVRPVAAERGTRVEVTDLFAATPARLKFLKSDRAEAGAVAEILRRLAVAHPQI 191 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 FT ++ G++ R++ V+G DF N+V ++ + L G+ G+PTF Sbjct: 192 RFTLRGEGGAGLTFPAETGQGSWLRRLAAVLGADFAANSVPVSLEREGFALDGHIGLPTF 251 Query: 243 NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPA 302 +R A + +NGR V+D+ +L +R AYA+ + R+PV+ L L DP +VDVNVHPA Sbjct: 252 HRAAATHMHFVVNGRPVRDRLLLGAVRGAYADVMASDRHPVLALALTCDPTEVDVNVHPA 311 Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN--------APKTH 354 K+ +RFR P ++R I+ +I +A+ ++G S ++ K + S Sbjct: 312 KTEVRFREPGLVRGLIVSAIHEALRREGGRASGSVAAKTLESLRPAQGPLLPLRRPDPPP 371 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDD----------PTYSEDNDPVEESEATHY 404 + + + FL + +D+ P ++ +P E + + Sbjct: 372 AAPRGSGRVESFAQDFLGAPEAAEQPAGFADEAQAAFAGAAMPPGADWREPAPEPASPTH 431 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 LG A AQ+H+ YI++QT DG+VIVDQHAAHERL++E+++++ + I Q LL P++++ Sbjct: 432 PLGAARAQLHETYIVAQTQDGIVIVDQHAAHERLVYERLKRERAAGGIARQLLLIPDVVE 491 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L E + E DL LG+ E FG A+ +RE+PA L+ ++ LL D++D + + Sbjct: 492 LDPAEADRLAEAAGDLEALGLVLEAFGHGAVLVREVPAALAGGSVRALLADVVDVLQE-G 550 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 L R++ +L+ M+C+GSIR+GR+++ EMN LLREME P S QCNHGRPT+++LK Sbjct: 551 GADPLARRLDAVLSRMSCHGSIRAGRRLRPEEMNALLREMEATPLSGQCNHGRPTYVELK 610 Query: 585 LSDIEKLFGR 594 L DIE+LFGR Sbjct: 611 LHDIERLFGR 620 >gi|294496663|ref|YP_003543156.1| DNA mismatch repair protein MutL [Methanohalophilus mahii DSM 5219] gi|292667662|gb|ADE37511.1| DNA mismatch repair protein MutL [Methanohalophilus mahii DSM 5219] Length = 597 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 198/596 (33%), Positives = 304/596 (51%), Gaps = 12/596 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L E INQIAAGE+IERP+ +KELI+NSLDA +S + I G G + D+G G Sbjct: 7 IHLLDEATINQIAAGEVIERPASVVKELIDNSLDAGASDIRVEIEGAGSKSITVIDDGSG 66 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + EE P+A +H TSKI DD I T GFRGEAL SI AVS + L+SR + + Sbjct: 67 IGREEAPLAFTKHSTSKIESKDDLHRIITLGFRGEALSSIAAVSRVELISRTADCLSAVR 126 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G + + GT VEV+DLF+ PAR +LKS++ E + ITD + R A+ P Sbjct: 127 IGVEGGLVGEATETGSSVGTRVEVQDLFYNTPARRKYLKSKRTELSHITDTVTRQALGNP 186 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+FT + G +R+ QV+G D + L K + ++L GY P Sbjct: 187 GVAFTLLNEGKVVLR----CGKGELFDRMVQVLGADVARQLIPLEYKDDLLSLWGYISKP 242 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + R N Y F+NGR + I + +R Y +P GRYP VL + I+ +VDVNVH Sbjct: 243 GYYRSNREMNYFFVNGRNISSPAISNAVRLGYYTMLPKGRYPAAVLNVRINLEEVDVNVH 302 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS--SVLSKKMISSFHQDNAPKTHLPKY 358 PAK Y+R I + I ++++A+ ++ + + M SS P + P Sbjct: 303 PAKRYVRLSRENEIMDGITAAVEQALKQEKLVPEVKPSRTTTMQSSLASPEKPNSKEPIS 362 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 + S + T L S + ++E+ E + Q++ YI Sbjct: 363 SESPVIRENTPNYSAPPRDTQRRLKSSERAFAEEKAH-PERVGSGVSDARILGQVNDLYI 421 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +++T +GL+++DQHAAHER+++E++ + K Q L++P +DL E L+ E+ Sbjct: 422 VAETDEGLLLIDQHAAHERIMYEQLSRR---VKHDWQELISPVTVDLTTREKVLLEEYIP 478 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L LG FG I +P ++ K P ++ D++ ++ + + + + Sbjct: 479 YLENLGFSLSEFGTQTYVITTVPTVMGKIEDPSVVHDLLADLFEQGRVKEKKGMEDMLCK 538 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 TMAC +I++G +M LL ++EK N C HGRPT I L ++++KLF R Sbjct: 539 TMACRSAIKAGAPCNMEQMQNLLDQLEKTENPYTCPHGRPTMITLGKAELDKLFKR 594 >gi|161870311|ref|YP_001599481.1| DNA mismatch repair protein [Neisseria meningitidis 053442] gi|189030402|sp|A9M0G1|MUTL_NEIM0 RecName: Full=DNA mismatch repair protein mutL gi|161595864|gb|ABX73524.1| DNA mismatch repair protein [Neisseria meningitidis 053442] Length = 658 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 210/658 (31%), Positives = 341/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ + GGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKPVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 ++ K + ++ KT Y + Q L L+E+R + N Sbjct: 359 DSENLFDSASDYPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSRLEQARFGNMPSETPIPKTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-KITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ K+ SQ LL P ECA + ++ Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGKLQSQRLLIPVTFAASHEECAALADY 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R +PA+L K ++ L +D++ E+ ++ T+++ +I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLGELAQVGSSQTIEEHENHI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSVRAGRQLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|319638431|ref|ZP_07993193.1| DNA mismatch repair protein mutL [Neisseria mucosa C102] gi|317400180|gb|EFV80839.1| DNA mismatch repair protein mutL [Neisseria mucosa C102] Length = 658 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 219/658 (33%), Positives = 349/658 (53%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR + Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKPVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK-------------------KGISTSSVLSKK 340 HP K+ IRFR+ + + ++ KA+ G++ + + S+ Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 341 MISSFHQDNAP-----------------KTHLPKYATSLTNTQEKLFLQENRLSTN---- 379 + D + KT Y + Q L L+E+R + N Sbjct: 359 NSENLFDDVSNYPTGNKSDTRNAFGSSGKTAPMPYQAARAPQQRSLSLRESRAAMNTYAE 418 Query: 380 --------DLLPSDDPTYSEDNDPVE--------------ESEATHYQLGIACAQIHQNY 417 DL S N P E S++ LG A AQ+ Y Sbjct: 419 LYKKTDDIDLELSQFEQARFGNMPSEMPTQKTDTPLSDGLPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R +PA+L K ++ L +D++ E+ ++ T+++ +I Sbjct: 539 AEALAGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLGELAQVGSSQTIEEHENHI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSVRAGRQLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|71908777|ref|YP_286364.1| DNA mismatch repair protein MutL [Dechloromonas aromatica RCB] gi|71848398|gb|AAZ47894.1| DNA mismatch repair protein MutL [Dechloromonas aromatica RCB] Length = 615 Score = 538 bits (1386), Expect = e-150, Method: Composition-based stats. Identities = 207/611 (33%), Positives = 333/611 (54%), Gaps = 23/611 (3%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L + +I+QIAAGE++ERP+ +KEL+ENSLDA S ++ + GG +ITD+ Sbjct: 9 MPTIARLPDLLISQIAAGEVVERPASVLKELLENSLDAGSKAIQVHLEEGGVKLIRITDD 68 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +E+ +A+ RH TSKIS DD + T GFRGEAL S+ +V+ L++ SR Sbjct: 69 GCGIARDELALALTRHATSKISSLDDLERVGTLGFRGEALASVASVARLSITSRERGAAH 128 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 ++ + P A+ GT+VE+RDL+F PAR FLKSE E D ++R+A+ Sbjct: 129 AWKLRGEPG--AEPEPAALMAGTVVEMRDLYFNTPARRKFLKSESTEFAHCADAVKRLAL 186 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P V+ + + N +++ + P RI+ ++G++F+ A ++ + +++ G+ Sbjct: 187 TRPDVAISLTHNGRNLFQL----APADAPRRIADILGDEFLGAARAVDAGTGALSIGGFA 242 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 PT + YVF+NGR V+DK I +R AY + + R P V L + IDP VDV Sbjct: 243 IDPTRATDAKDGQYVFVNGRFVRDKIISHALREAYRDVLHGSRQPAVCLFVNIDPALVDV 302 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK-----------GISTSSVLSKKMISSFH 346 NVHPAK+ +RFR+ + F+ +IQ+ + + SS +S + Sbjct: 303 NVHPAKTEVRFRDSRAMHQFVFHAIQRTLAAPVQAEAAPALIERATPSSEYQAPALSPEN 362 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE---DNDPVEESEATH 403 + N ++ SL + + SE P+E + + Sbjct: 363 RPNVEYAPPLRHQGSLGVAEPAAAAYLAFARAAQDIGQSPAPRSEVAPQFQPIESTGSDG 422 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 LG A AQ+H YI++Q GL+++D HAAHER+++EK++ F++ +I +Q LL P + Sbjct: 423 PPLGYALAQLHGIYILAQNARGLILIDMHAAHERILYEKLKTAFDNRQIATQALLIPAVF 482 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 + A + EH + L LG + GPN + +R +PA+L + L + +I E+ + Sbjct: 483 SADPLDIAAVEEHADALADLGFQITPLGPNQLGVRAVPALLQSGDPAALAKSLIAELREH 542 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 T R +LATMAC+G++R+ R++ EMN LLR+ME+ + QCNHGRPT+ +L Sbjct: 543 GITQLATARRNELLATMACHGAVRARRQLTVPEMNALLRQMEETERAGQCNHGRPTWTEL 602 Query: 584 KLSDIEKLFGR 594 + ++KLF R Sbjct: 603 TMDQLDKLFLR 613 >gi|319405154|emb|CBI78760.1| DNA mismatch repair protein MutL [Bartonella sp. AR 15-3] Length = 612 Score = 538 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 269/612 (43%), Positives = 392/612 (64%), Gaps = 19/612 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ +KEL+EN++DA +SR+E VIA GGKS +++DNG Sbjct: 1 MIIRHLSETIINQIAAGEVIERPANVVKELVENAIDAGASRIEIVIANGGKSLIRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ +++ +A+ RHCTSKI DD NI GFRGEALPSIG+VS L L SR +N+ A+ Sbjct: 61 CGIPEDQLILAISRHCTSKIIDDVHNICFLGFRGEALPSIGSVSKLKLTSRTQNSNSAAE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ +I +P A NPGTIVEVRDLFF PARL F+KS++ ETN ITD I+R+AIA+P Sbjct: 121 IIVTAGRIEEPKPSAANPGTIVEVRDLFFVTPARLKFMKSDRAETNAITDTIKRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ + I + N +RI+Q++G++F N++ L+ K + L G+ G+ Sbjct: 181 HIRFSLAGIDRAPMEFPAMEKNTQGQLQRITQIMGKEFAPNSLLLDAKRESVHLTGFVGL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNR N+ + ++NGR V+DK + IR AYA+ I R+ V +L + + P VDVNV Sbjct: 241 PSFNRSNSLYQFAYVNGRPVRDKLLWGAIRGAYADVIAQNRHAVAILFIHLPPTDVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +RFR+P++IR II +I++A+++ GI +S S+ M+++F + + Sbjct: 301 HPAKMDVRFRDPSLIRGLIIGAIREALHQTGIRPTSTGSEAMLAAFRTQPLETVKMHQPF 360 Query: 360 TSLTNTQ-----------------EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 + T + LQE+ + D L + + SE Sbjct: 361 SDSTPPYHFGPEITSIFHKPLDMTSSIDLQEDTIPIIDRLSTPSGDTRAAINK-PTSEEL 419 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 HY LG A AQIH+NYI++QT D L+IVDQHAAHERL++E ++ S + SQ LL PEI Sbjct: 420 HYPLGAARAQIHKNYIVAQTQDSLIIVDQHAAHERLVYESLKNALYSKPLPSQLLLIPEI 479 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 +++ E + ++ H + L + G+ + FG AI + EIP++L + N+ L++D+ DE + Sbjct: 480 VEISEEDATCLLSHKDALKKFGLGIDSFGIGAIVVHEIPSMLGEINVQALIKDLADEAAE 539 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 T L+ ++ + ATMAC+ SIRSGR + EMN LLR++E PNS+ CNHGRPT+I+ Sbjct: 540 YDTIDNLKGMLDYVAATMACHSSIRSGRLLHPEEMNALLRQIEATPNSATCNHGRPTYIE 599 Query: 583 LKLSDIEKLFGR 594 LKL+DIE+LFGR Sbjct: 600 LKLADIERLFGR 611 >gi|297184024|gb|ADI20144.1| DNA mismatch repair enzyme (predicted ATPase) [uncultured alpha proteobacterium EB080_L06A09] Length = 611 Score = 538 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 259/600 (43%), Positives = 387/600 (64%), Gaps = 12/600 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+LS+ N+IAAGE++ERPS AIKEL+ENS+DA +SR++ + GGK+ ++ D+G G Sbjct: 15 IRQLSDAAANRIAAGEVVERPSSAIKELVENSIDAGASRIDISYSDGGKTLIRVKDDGHG 74 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + ++ +A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ SR GA I Sbjct: 75 IAENQLLLALSRHATSKIDGTDLLNIHTFGFRGEALPSMGAVGRLTITSRIQDVAMGATI 134 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 + G I VRP GT+VE+RDLF PARL FL++++ E I+DVI+R+A++ P Sbjct: 135 TVDGGLIGRVRPAPSTIGTVVELRDLFHATPARLKFLRTDRAEAGAISDVIKRLAMSEPF 194 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQ 234 +FT + R G+ + R+S+V+G DF N+ ++ + +TL Sbjct: 195 KAFTLRDVTGGGDGRIIFRADPETGDLFDAMYGRLSKVLGVDFAKNSFRVDADRDGMTLT 254 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT+++G++ ++F+NGR+V+DK +LS +R AY++ + GRYPVV L +E D + Sbjct: 255 GYASLPTYSKGSSVSQFIFVNGRSVKDKNLLSALRAAYSDFLHSGRYPVVALFIECDFER 314 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAK+ +RFR P R +I ++ A+ ++G SS ++ + +F + Sbjct: 315 VDVNVHPAKAEVRFREPGTARGLVISGLRHALAEEGHRASSTIADATLGAFKKSGDINNS 374 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 S + + E +++ +++ ++ + +E+ +LG A AQIH Sbjct: 375 S-NLRMSQSWSMEVPRHHPDQVGFSEIQNDFSSRQLDNENIIEQIS---NKLGAARAQIH 430 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +NYI+SQT DGLVIVDQHAAHERL++EK++ +++QTLL PEII+L E + A +M Sbjct: 431 ENYILSQTFDGLVIVDQHAAHERLVYEKLKNQMAMNGVSAQTLLIPEIIELSEQDAAELM 490 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 E +L+ G+ E FG N+I +RE PAIL + N L+ DI+DE+ D S + ++++++ Sbjct: 491 EISGELNGFGLNIENFGGNSIIVRETPAILGEVNAKNLILDILDELKDWSQSNIVKEKLD 550 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 IL+ +AC+GSIRSGR M+ EMN LLREME P+S QCNHGRPT+++LKL+DIEKLFGR Sbjct: 551 AILSRVACHGSIRSGRIMKVEEMNALLREMEATPHSGQCNHGRPTYVELKLNDIEKLFGR 610 >gi|325144738|gb|EGC67033.1| DNA mismatch repair protein MutL [Neisseria meningitidis M01-240013] Length = 658 Score = 538 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 213/658 (32%), Positives = 342/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ +E +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIEVELAGGGIRLIRVSDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQNDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++GEDF ++ ++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGEDFQTASLGIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRANLTESVGNAGEVLHDITGVVSTPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 ++ K + ++ KT Y ++ Q L L+E+R + N Sbjct: 359 DSENLFDSVSNYPTGNKSDTHNAFGSSGKTAPMPYQSAYAPQQRSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSRFEQARFGNMPSETPAPQTDTPLSDGIPSPSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + ++ Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEECAALADY 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R +PA+L K ++ L +D+++E+ ++ T+++ I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLNELAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|15677300|ref|NP_274454.1| DNA mismatch repair protein [Neisseria meningitidis MC58] gi|20455152|sp|Q9JYT2|MUTL_NEIMB RecName: Full=DNA mismatch repair protein mutL gi|7226683|gb|AAF41803.1| mismatch repair protein MutL [Neisseria meningitidis MC58] gi|316984569|gb|EFV63534.1| DNA mismatch repair MutL family protein [Neisseria meningitidis H44/76] gi|325134577|gb|EGC57221.1| DNA mismatch repair protein MutL [Neisseria meningitidis M13399] gi|325140613|gb|EGC63133.1| DNA mismatch repair protein MutL [Neisseria meningitidis CU385] gi|325199942|gb|ADY95397.1| DNA mismatch repair protein MutL [Neisseria meningitidis H44/76] gi|325205804|gb|ADZ01257.1| DNA mismatch repair protein MutL [Neisseria meningitidis M04-240196] Length = 658 Score = 538 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 213/658 (32%), Positives = 342/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ +E +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIEVELAGGGIRLIRVSDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQNDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++GEDF ++ ++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGEDFQTASLGIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRANLTESVGNAGEVLHDITGVVSTPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 ++ K + ++ KT Y ++ Q L L+E+R + N Sbjct: 359 DSENLFDSVSNYPTGNKSDTHNAFGSSGKTAPMPYQSAYAPQQRSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSRFEQARFGNMPSETPAPQTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + ++ Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEECAALADY 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R +PA+L K ++ L +D+++E+ ++ T+++ I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLNELAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|238916922|ref|YP_002930439.1| DNA mismatch repair protein MutL [Eubacterium eligens ATCC 27750] gi|238872282|gb|ACR71992.1| DNA mismatch repair protein MutL [Eubacterium eligens ATCC 27750] Length = 625 Score = 538 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 189/627 (30%), Positives = 295/627 (47%), Gaps = 37/627 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + IN+IAAGE++ERPS +KEL+EN++DA ++ + I GG SF ++TDNG Sbjct: 1 MPITLLDQNTINKIAAGEVVERPSSVVKELVENAIDAGATAITVEIKEGGISFIRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +EI +A +RH TSKI +D + + GFRGEAL SI AVS + L+++ + +G Sbjct: 61 SGINKDEIEIAFKRHATSKIESIEDLMAVSSLGFRGEALASIAAVSQVELITKTADSLSG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + I G V + GT VR+LF+ P R FLK+ E I ++ +A++ Sbjct: 121 VRYTIDGGVPGEVAEIGAPEGTTFIVRNLFYNTPVRRKFLKTATTEGGYIGSLVEYLALS 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P +SF F + N+ S N N + I V G D NN E++ KS +I G+ G Sbjct: 181 HPDISFRFISNNQNKLH---TSGNMNLKDIIYNVYGRDITNNLYEISGKSQDIEASGFIG 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P RGN +INGR ++ I I AY I YP + +I+P +DVN Sbjct: 238 KPMVVRGNRTYENYYINGRYIKSSIITKAIEDAYKGFIMPHNYPFSAIHFKINPAIIDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K +RF N I NF+ + KA+N K + + + ++ + +P Sbjct: 298 VHPTKMELRFSNNEYIYNFVYDTCLKALNSKELIAEVSVPDPVAVKMQEEPVVRNVMPDV 357 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDD-----------------PTYSEDNDPVEESEA 401 N + + + S + V +SE Sbjct: 358 KLPEKNVSDSMPCKTETKSAESAKAEIKPKRLPEPFEIKGSLQMVMEDKVRYEAVTKSEP 417 Query: 402 THYQLG--------------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 Q+ Y + + D ++DQHAAHE++++E+ Sbjct: 418 PKQMNLFENKLLDENSRNKYRIIGQLFDTYWLIEFEDKFYMMDQHAAHEKVLYERTMNKL 477 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 ++ I +Q +L P ++ L E + + + RLG + E FG N + IPA L K Sbjct: 478 HNKTIGTQMILPPIVLSLNMHEEEIYKTNQDIFKRLGYEIEEFGGNEYKVTGIPAGLPKM 537 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 + QLL D++D + + S D I +A+M+C +++ ++ E L+ E+ K Sbjct: 538 DYKQLLIDVLDGLSEESAGKD-PDIITEKVASMSCKAAVKGNNRLSFNEAFELMDELMKA 596 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N C HGRPT I + +IEK F R Sbjct: 597 ENPYNCPHGRPTLIMMSRYEIEKKFKR 623 >gi|291613850|ref|YP_003524007.1| DNA mismatch repair protein MutL [Sideroxydans lithotrophicus ES-1] gi|291583962|gb|ADE11620.1| DNA mismatch repair protein MutL [Sideroxydans lithotrophicus ES-1] Length = 640 Score = 538 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 203/641 (31%), Positives = 333/641 (51%), Gaps = 53/641 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L + +INQIAAGE+IERP+ A+KEL+ENSLDA ++ + + GGG + DNG Sbjct: 3 SIQLLPDLLINQIAAGEVIERPASALKELLENSLDAGATDIAVQLEGGGIKRLVVRDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A+ RH TSKI+ DD + + GFRGEAL S+ AV+ +TL SR Sbjct: 63 GIAREQLPLALMRHATSKIASLDDLQRVASMGFRGEALASMAAVAQVTLTSRNADVAHAW 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + S V P A GT VE+R+L+F PAR FLKSE E + +R+A++ Sbjct: 123 KIEAADGTQSDVTPAAHPQGTSVEMRELYFNTPARRKFLKSESTEFAWCEETFKRIALSR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN----------------------------------- 204 P V+F+ +++ + + Sbjct: 183 PDVAFSLQHNGKMVWQLAASKSTPSPYPLPEGEGFGGLPSPSGITSDLPARGLSRLASSS 242 Query: 205 -----------FPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVF 253 +RI+ ++G +F +AV + + + L G +P ++R ++ Y F Sbjct: 243 IRGIEGEEKHSLQQRITAILGPEFGQHAVNVERQIGPLHLYGIAALPAYSRSTRDEQYFF 302 Query: 254 INGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTI 313 +NGR V+DK ++ +R AY + + R+P VL L++ P QVDVNVHPAKS +RFR Sbjct: 303 VNGRFVRDKVLMHAVRQAYQDILHHQRHPAFVLFLDMPPEQVDVNVHPAKSEVRFRESQG 362 Query: 314 IRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE 373 I F+ ++Q A++ ST+S S S + + +A Q+ + Sbjct: 363 IHQFVFHALQDALSATMGSTASNQSATSPSPSGRGVGVREEPQPFAPI---QQQTMTFSA 419 Query: 374 NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 + L + E + +A LG A Q+ YI++Q GL++VD HA Sbjct: 420 AQPQAAYKLWEEAAVVREQESAAPQQDAH--PLGFALGQLSGIYILAQNQQGLIVVDMHA 477 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 AHER+++E+++ F++ ++ +Q LL P + A E E LH+LG N Sbjct: 478 AHERIVYERLKTAFDAQQMPTQPLLIPVTFAAEALDVATAEEEQEALHKLGFDIAPISTN 537 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQ 553 +A+R +PA+L + + R+++ E+ D + L +R +LAT+AC+ ++R+ +++ Sbjct: 538 TLAVRAMPAMLKQSHAETAAREVLHELRDFGASRALTERRNELLATLACHSAVRANQQLS 597 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN +LREME+ + QCNHGRPT+ ++ L++++ +F R Sbjct: 598 LPEMNAILREMEQTERADQCNHGRPTWFQMTLAELDAMFMR 638 >gi|238022530|ref|ZP_04602956.1| hypothetical protein GCWU000324_02438 [Kingella oralis ATCC 51147] gi|237867144|gb|EEP68186.1| hypothetical protein GCWU000324_02438 [Kingella oralis ATCC 51147] Length = 636 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 218/638 (34%), Positives = 332/638 (52%), Gaps = 48/638 (7%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I+ L +INQIAAGE++ERP+ A+KE++ENSLDA ++++ I GGG ++ DN Sbjct: 1 MPSIQFLPSHLINQIAAGEVVERPANALKEIVENSLDAGATQISVDIVGGGIKLLRVCDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM ++++P+A+ RH TSKI D + + GFRGE L SI +VS LTL SR N Sbjct: 61 GCGMEADDLPLALSRHATSKIKSLSDLERVQSMGFRGEGLASIASVSRLTLTSRTTHNAH 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 QI + V A GT +E+ +LFF PAR FLKSE E ++ R+A+ Sbjct: 121 AHQIRAVDGALGEVAAAAHPVGTTIEIAELFFNTPARRKFLKSENTEYAHCATMLERLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A P VSF+ + Q ER++ ++G F A+ ++ ++ E+ L+G+ Sbjct: 181 ANPAVSFSLKNNGKTVFDYPAQP----LSERVAAIMGAAFQAAALPIDSQAGEMALRGFV 236 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 PTF +G +++ + F+N R V+DK +L ++ AY + + P VL L++ P QVDV Sbjct: 237 SKPTFAQGKSDKQFFFVNNRFVRDKVMLHAVKQAYRDVLHNQITPAFVLFLDLPPEQVDV 296 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK----MISSFHQDNAP-- 351 NVHP K+ IRFR+ + I ++ KA+ + + +S Q AP Sbjct: 297 NVHPTKTEIRFRDSQAVHQMIFHALNKALAETRADVTESVSNAGALLQQRFVPQPAAPDE 356 Query: 352 ------------------------------KTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 +P A + Q L L ENR + Sbjct: 357 TLFLGSLKTEGFNGMTTAIPAADAFSGSPKSAPMPYQAAARAPQQRPLSLNENRAALQAY 416 Query: 382 L----PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 DD E Y LG A AQ+ Y+++Q D L++VD HAA ER Sbjct: 417 AELYREDDDLAAFEPQAAQVRQPENAYPLGFAIAQLLGIYVLAQAADSLILVDMHAAAER 476 Query: 438 LIFEKMRQDFN-STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 + +EKM+ + + +Q LL P + E A ++ +L + G+ G IA Sbjct: 477 VNYEKMKAQRDAEGSLKTQMLLIPVAFEASHAELAARADYAAELAQYGLDLADLGNGQIA 536 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R +P +L K ++ L RD++ E+ ++ T++ + IL+TMAC+GSIR+GR++ E Sbjct: 537 VRAVPQMLGKADVAALARDVLRELAAVGSSQTIEAKENQILSTMACHGSIRAGRQLTLPE 596 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MN LLR+ME P S+QCNHGRPT++KL L+D++ LF R Sbjct: 597 MNALLRDMEATPRSNQCNHGRPTWVKLTLADLDGLFLR 634 >gi|241758859|ref|ZP_04756972.1| DNA mismatch repair protein MutL [Neisseria flavescens SK114] gi|241321067|gb|EER57280.1| DNA mismatch repair protein MutL [Neisseria flavescens SK114] Length = 658 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 218/658 (33%), Positives = 348/658 (52%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ S++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHSDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGVTTTPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTN---- 379 +++ K + ++ KT Y + Q L L+E+R + N Sbjct: 359 DGENLFDSASNYPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQRSLSLRESRAAMNTYAE 418 Query: 380 --------DLLPSDDPTYSEDNDPVE--------------ESEATHYQLGIACAQIHQNY 417 DL S N P E S++ LG A AQ+ Y Sbjct: 419 LYKKTDDIDLELSQFEQARFGNMPSETPTPKTDKQCSDGLPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R +PA+L K ++ L +D++ E+ ++ T+++ +I Sbjct: 539 AEMLTGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLGELAQVGSSQTIEEHENHI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSVRAGRQLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|121602207|ref|YP_989454.1| DNA mismatch repair protein [Bartonella bacilliformis KC583] gi|166231105|sp|A1UU01|MUTL_BARBK RecName: Full=DNA mismatch repair protein mutL gi|120614384|gb|ABM44985.1| DNA mismatch repair protein MutL [Bartonella bacilliformis KC583] Length = 611 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 266/611 (43%), Positives = 397/611 (64%), Gaps = 18/611 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ IKEL+EN++DA+++R+E I GGK+F +++DNG Sbjct: 1 MIIRHLSENIINQIAAGEVIERPANVIKELVENAIDAQATRIEISIVNGGKNFIRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++++ +AV RHCTSKI DD SNI GFRGEALPSIG+V+ L L SR + + Sbjct: 61 CGIPADQLTLAVSRHCTSKIVDDVSNICFLGFRGEALPSIGSVAKLKLTSRTQDADNANE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ KI +P A NPGTIVEVRDLFF PARL F+K+++ ET+ ITD+I+R+AIA+P Sbjct: 121 ISVIAGKIEGPKPAAANPGTIVEVRDLFFVTPARLKFMKTDRAETSAITDMIKRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ S+ + N +RI+Q++G++F N++ LN + + L G+T + Sbjct: 181 HIRFSLSSTDRMLMEFPATENNTQGQLQRITQIMGKEFAPNSIALNAERESVRLTGFTCL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNR N+ + ++NGR V+DK + IR AYA+ I R+ V ++ +++ P VDVNV Sbjct: 241 PSFNRSNSLHQFAYVNGRPVRDKLLWGAIRGAYADAIARDRHAVSIIFIDLPPADVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ +RFR+P +IR II +I +A+++ G+ +S S+ ++++F + Sbjct: 301 HPTKADVRFRDPGLIRGLIIGAIHEALHQAGVRHTSTHSESVLTAFQIHPLENLKSAQRP 360 Query: 360 TSLTNTQ----------------EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 S T+ + + L+E + + L + + + +E H Sbjct: 361 FSYTSQPYHRVSTTTSMLQKPLDDSIDLREGIVPMMECLSAPS-SDTRATIQTSPTEELH 419 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 Y LG A AQIH+NYIISQT D L+IVDQHAAHERL++E ++ S ++SQ LL PEI+ Sbjct: 420 YPLGAAKAQIHKNYIISQTQDSLIIVDQHAAHERLVYEALKNALYSKPLSSQLLLIPEIV 479 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 +L E + A ++ H + L + G+ E FGP AI +RE PA+L + N L++D+ DE + Sbjct: 480 ELSEEDAACLLTHKDSLQKFGLGIEPFGPGAILVRETPAMLGEINAQALIKDLADEAAEY 539 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 TT L+ ++ + ATMAC+ S+RSGR ++ EMN LLR++E+ P+SS CNHGRPT+I+L Sbjct: 540 DTTNNLKAMLDYVAATMACHSSVRSGRLLRPEEMNALLRQIEETPHSSTCNHGRPTYIEL 599 Query: 584 KLSDIEKLFGR 594 KL+DIE+LFGR Sbjct: 600 KLADIERLFGR 610 >gi|167745631|ref|ZP_02417758.1| hypothetical protein ANACAC_00323 [Anaerostipes caccae DSM 14662] gi|167654943|gb|EDR99072.1| hypothetical protein ANACAC_00323 [Anaerostipes caccae DSM 14662] Length = 620 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 192/623 (30%), Positives = 305/623 (48%), Gaps = 39/623 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +K I+ IAAGE+IERP+ +KEL+EN++DA+++ V I GG + ++TDNG G Sbjct: 4 IQLLDQKTIDNIAAGEVIERPASVVKELVENAIDAKATAVTVEIRDGGMTLMRVTDNGCG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + EE+ A RH TSKI +D ++ + GFRGEAL SI AV + ++++ +G Sbjct: 64 IPKEEVRTAFLRHATSKIRTVEDLVSVSSLGFRGEALSSISAVGQVEVITKTAGAFSGVS 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + + + GT VR+LF+ PAR FLKS E + ++ MA+++P Sbjct: 124 YKIFGGEEQGLDEIGAPDGTTFLVRNLFYNTPARRKFLKSPVTEAGYVEQIMVHMALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F F N+ + S NGN + I + G D + ++ K +++ GY G P Sbjct: 184 DIAFKFIHNSKNKM---YTSGNGNVKDIIYHLYGRDVAGALLPISLKGPTVSVDGYVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +RGN N FINGR ++ K I I Y +YP V L +E++P +DVNVH Sbjct: 241 FISRGNRNYESYFINGRYIKSKIIYKAIEDGYKTFTMAHKYPFVCLNIEVEPELLDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-----------SSVLSKKMISSFHQDN 349 P K IRFRN + + I++ ++ + + VL +KM F Q Sbjct: 301 PTKMEIRFRNEKELYELLASGIKETLSHREMIPKAELGKQKKEAKPVLPEKMPEPFEQVR 360 Query: 350 APKTHLPKYA------------------TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + H K A + ++ +F N + + T +E Sbjct: 361 REERHEEKAAEYTAPEIPAGPQGTLKKYAAKPEAKKSVFAGVNYRNDDGKEDLQQMTLNE 420 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 + EE++ Q+ + Y + + D L I+DQHAAHE++ +EK+ + F K Sbjct: 421 TSLLDEEAKPDR----KVIGQLFKTYWLIEYEDQLFIMDQHAAHEKVNYEKLMKSFREKK 476 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 I SQ + P ++ L E ++ E + LG E FG N IR++PA L + Sbjct: 477 IYSQGVEPPYVVTLSMAEAKVLEETKDIFQELGFTIEAFGGNEFCIRQVPANLYGLKEKE 536 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 L +++D + + I + +A+MAC S + ++M E+ LL + + N Sbjct: 537 LFMELLDSLTADGVKKD-PEMITDKIASMACKMSAKGNQRMSLPEVRNLLDLLMECENPY 595 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT IK+ +IEK F R Sbjct: 596 TCPHGRPTMIKMSKYEIEKKFKR 618 >gi|326795798|ref|YP_004313618.1| DNA mismatch repair protein mutL [Marinomonas mediterranea MMB-1] gi|326546562|gb|ADZ91782.1| DNA mismatch repair protein mutL [Marinomonas mediterranea MMB-1] Length = 661 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 214/657 (32%), Positives = 348/657 (52%), Gaps = 64/657 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ +KEL+ENSLDAE+++++ I GG +I DNG Sbjct: 3 RINLLSPRLANQIAAGEVVERPASVVKELLENSLDAEATQLDVDIEQGGVRRMKIRDNGR 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ RH TSKIS DD + T GFRGEAL SI +VS + L S+ + Sbjct: 63 GIVKDDLSLAMSRHATSKISTLDDLEAVQTLGFRGEALASISSVSRMHLTSKAYGEDEAW 122 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ G+ +++ RP + GT +EVRDLFF PAR FL++E+ E N + +V++R+A++ Sbjct: 123 RVEAEGKDMTTAVRPASHPDGTTIEVRDLFFNTPARRKFLRTEKTEFNHLEEVVKRLALS 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V F S Y + + + R+ ++G+ FI NA+ ++ ++ + L G+ G Sbjct: 183 RYDVGFRLSHNGKQVYDLRPVTDQLHAEHRLGTLLGKKFIENALTIDVEAAGLRLWGWIG 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL LE+DP VDVN Sbjct: 243 LPTFSRSQADLQYFFVNGRVVRDKLVAHAVRQAYRDVLYNGRHPTFVLYLELDPATVDVN 302 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST---------------SSVLSKKMIS 343 VHP K +RFR+ ++ +F+ I K I + +S+ +++ Sbjct: 303 VHPTKHEVRFRDGRLVHDFLFSRIHKVIADVRPESGEAPTQIGGAPDAEVASMPTQQSRM 362 Query: 344 SFHQDNAPKTHLPKYATSLTNTQ------------------------------------- 366 +F ++ + N Sbjct: 363 AFQREPQSAAGGVPWGAPNNNPVGGEQVRGQLEGLRQLNENANQALGVVGGGEIPQGIDP 422 Query: 367 --------EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL-GIACAQIHQNY 417 + + + V ES+A G A AQIH Y Sbjct: 423 LTGEILELASNSSMPRVETEQTFYRQEGDNGRRFEELVSESDAHDMPPLGYAVAQIHGVY 482 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 I+++++ GL++VD HAAHER+++E+M+ F + + SQ LL P + + + E L+ + Sbjct: 483 ILAESSVGLIVVDMHAAHERIVYERMKNAFYAKSVPSQPLLVPINVTVSQSEADLVEDSQ 542 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 G K ER G ++ +RE+P IL ++ L+RD++ ++ + T L+ R ++ Sbjct: 543 SVFEAFGFKVERTGVESVMVREVPIILINGDVENLVRDVVSDLTVNGATDLLEARANELM 602 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 A+MAC+G++R+ RK+ EMN LLR+ME S QCNHGRPT+ +L +SD++KLF R Sbjct: 603 ASMACHGAVRANRKLTIAEMNSLLRDMEVTERSGQCNHGRPTWTQLSMSDLDKLFLR 659 >gi|317472766|ref|ZP_07932078.1| DNA mismatch repair protein MutL [Anaerostipes sp. 3_2_56FAA] gi|316899758|gb|EFV21760.1| DNA mismatch repair protein MutL [Anaerostipes sp. 3_2_56FAA] Length = 620 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 192/621 (30%), Positives = 307/621 (49%), Gaps = 35/621 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +K I+ IAAGE+IERP+ +KEL+EN++DA+++ V I GG + ++TDNG G Sbjct: 4 IQLLDQKTIDNIAAGEVIERPASVVKELVENAIDAKATAVTVEIRDGGMTLMRVTDNGCG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + EE+ A RH TSKI +D ++ + GFRGEAL SI AV + ++++ +G Sbjct: 64 IPKEEVRTAFLRHATSKIRTVEDLVSVSSLGFRGEALSSISAVGQVEVITKTAGAFSGVS 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + + + GT VR+LF+ PAR FLKS E + ++ MA+++P Sbjct: 124 YKIFGGEEQGLDEIGAPDGTTFLVRNLFYNTPARRKFLKSPVTEAGYVEQIMVHMALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F F N+ + S NGN + I + G D + ++ K +++ GY G P Sbjct: 184 DIAFKFIHNSKNKM---YTSGNGNVKDIIYHLYGRDVAGALLPISLKGPTVSVDGYVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +RGN N FINGR ++ K I I Y +YP V L +E++P +DVNVH Sbjct: 241 FISRGNRNYESYFINGRYIKSKIIYKAIEDGYKTFTMAHKYPFVCLNIEVEPELLDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-----------SSVLSKKMISSF---- 345 P K IRFRN + + I++ ++ + + VL +KM F Sbjct: 301 PTKMEIRFRNEKELYELLASGIKETLSHREMIPKAELGKQKKEAKPVLPEKMPEPFEQVR 360 Query: 346 ----HQDNAPKTHLPKYATSLTNTQEKLFLQENRLST--------NDLLPSDDPTYSEDN 393 H++ A + P+ T +K ++ + ND D + + Sbjct: 361 REERHEEKAAEYTAPEIPAGPQGTLKKYAVKPEAKKSVFAGVNYRNDDGKEDLQQMTLNE 420 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 + + EA + Q+ + Y + + D L I+DQHAAHE++ +EK+ + F KI Sbjct: 421 TSLLDEEAKPDR--KVIGQLFKTYWLIEYEDQLFIMDQHAAHEKVNYEKLMKSFREKKIY 478 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 SQ + P ++ L E ++ E + LG E FG N IR++PA L +L Sbjct: 479 SQGVEPPYVVTLSMAEAKVLEETKDIFQELGFTIEAFGGNEFCIRQVPANLYGLKEKELF 538 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 +++D + + I + +A+MAC S + ++M E+ LL + + N C Sbjct: 539 MELLDSLTADGVKKD-PEMITDKIASMACKMSAKGNQRMSLPEVRNLLDLLMECENPYTC 597 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 HGRPT IK+ +IEK F R Sbjct: 598 PHGRPTMIKMSKYEIEKKFKR 618 >gi|325201860|gb|ADY97314.1| DNA mismatch repair protein MutL [Neisseria meningitidis M01-240149] gi|325208388|gb|ADZ03840.1| DNA mismatch repair protein MutL [Neisseria meningitidis NZ-05/33] Length = 658 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 215/658 (32%), Positives = 343/658 (52%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIGLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E T ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCTTMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS PERI+ ++G+DF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPTQS----LPERIAAIVGDDFQTASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 ++ K + + KT Y + Q L L+E+R + N Sbjct: 359 DSENLFDSASDYPTGNKPDTRNAFGASGKTAPMPYQAARAPQQHSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSRLEQARFGNMPSETPAPQTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-KITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ K+ SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGKLQSQRLLIPVTFATSHEECAALSDH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 + L G++ G N +A+R +PA+L K ++ L +D++ E+ ++ T+++ I Sbjct: 539 ADALAGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLSELAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|78065327|ref|YP_368096.1| DNA mismatch repair protein [Burkholderia sp. 383] gi|77966072|gb|ABB07452.1| DNA mismatch repair protein MutL [Burkholderia sp. 383] Length = 661 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 198/644 (30%), Positives = 327/644 (50%), Gaps = 59/644 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA +S + V+ GG ITD+G G Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGASTLRIVLEEGGVKRISITDDGCG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A+ RH TSKI ++ + T GFRGEAL SI +V+ +++ SR + Sbjct: 83 IPPDELALALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMSITSRTADAAHAMK 142 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A + GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 143 I---DAQTGVLSPAAGSTGTTIEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRAALARP 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N +R+++++G+ F + L+E++ + + G G+P Sbjct: 200 DVAISVLHNGKAVEHWNATEP----AQRVAKILGDSFATAHLPLDEQAGPLAVYGCAGLP 255 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 256 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 315 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---SKKMISSFHQDNAPKTHLPK 357 P+K +RFR+ I ++ ++Q+A+ + ++ +S + A P Sbjct: 316 PSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAQLSPAPRGPASFLDTPL 375 Query: 358 YATSLTNT-------------QEKLFLQENRLSTNDLLPSDDPTYSED------------ 392 + N ++++ R++ L + + Sbjct: 376 GQSQQGNAIGGSGFSPSSSSSSGNTWMRQARMTQGTLPVAQPLALYDALFGRKDTGAGTP 435 Query: 393 ----------------------NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 P+ + LG A QIH Y+++Q GLVIVD Sbjct: 436 DGTTTIARDSADAPLAPLPGFLASPIAATAHDEQPLGFALGQIHGIYVLAQNAHGLVIVD 495 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 HAAHER+++E+ + + Q LL P + E + E + L LG Sbjct: 496 MHAAHERILYEQFKNALADRSVAVQALLLPISMTATPVEIGTVEEERDTLESLGFDLAVL 555 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 P +AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ ++R+ R Sbjct: 556 SPTTLAIRAVPALLKDADLQSLARAVLADLHAFGGSRVLTERQHELLGTLACHHAVRANR 615 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ EMN LLR+ME + QCNHGRPT+ +L L+D+++LF R Sbjct: 616 RLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLNDLDRLFMR 659 >gi|319406600|emb|CBI80242.1| DNA mismatch repair protein MutL [Bartonella sp. 1-1C] Length = 612 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 275/612 (44%), Positives = 394/612 (64%), Gaps = 19/612 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ +KELIEN++DA +SR+E VIA GGKS +++DNG Sbjct: 1 MIIRHLSETIINQIAAGEVIERPANVVKELIENAIDAGASRIEIVIANGGKSLIRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ +++ +AV RHCTSKI+DD NI GFRGEALPSIG+VS L L SR +++ A+ Sbjct: 61 CGIPEDQLTLAVSRHCTSKITDDVHNICFLGFRGEALPSIGSVSKLKLTSRIQNSDSAAE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ KI +P A NPGTIVEVRDLFF PARL F+KS++ ET ITD I+R+AIA+P Sbjct: 121 IIVNAGKIEGPKPSAANPGTIVEVRDLFFVTPARLKFMKSDRSETIAITDTIKRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ + I + N +RI+Q++G++F N++ L+ K + L G+ G+ Sbjct: 181 HIRFSLAGIDRAPMEFPAMEQNTQGQLQRITQIMGKEFAPNSLILDAKRESVHLTGFIGL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNR N+ + ++NGR V+DK + IR AYA+ I R+ V +L + + P VDVNV Sbjct: 241 PSFNRSNSLHQFAYVNGRPVRDKLLWGAIRGAYADVIARDRHAVAILFIHLPPTDVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +RFR+P++IR II +I++A+++ GI +S S+ M+++F + +T + Sbjct: 301 HPAKMDVRFRDPSLIRGLIIGAIREALHQTGIRPTSTDSEAMLAAFRTEPL-ETEKMHQS 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE-----------------SEAT 402 S + + + L + + ED P+ E SE Sbjct: 360 FSYDARPRHIDPKLTSIFHKPLDINSSIDFQEDTIPIMEHLSTPSGDTRATINALTSEEL 419 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 HY LG A AQIH+NYI++QT D LVIVDQHAAHERL++E ++ S + SQ LL PEI Sbjct: 420 HYPLGAARAQIHKNYIVAQTQDSLVIVDQHAAHERLVYEALKNALYSQPLPSQLLLIPEI 479 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 ++L E + ++ H + L + G+ E FG AIA+ E P++L + NI L++D+ DE + Sbjct: 480 VELSEEDATCLLSHKDALKKFGLGIESFGIGAIAVHETPSMLGEINIQALIKDLADEATE 539 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 T L+ ++ + ATMAC+ SIRSGR + EMN LLR++E PNS+ CNHGRPT+I+ Sbjct: 540 YDTIDNLKGMLDYVAATMACHSSIRSGRLLHPEEMNALLRQIEATPNSATCNHGRPTYIE 599 Query: 583 LKLSDIEKLFGR 594 LKL+DIE+LFGR Sbjct: 600 LKLADIERLFGR 611 >gi|298368806|ref|ZP_06980124.1| DNA mismatch repair protein MutL [Neisseria sp. oral taxon 014 str. F0314] gi|298282809|gb|EFI24296.1| DNA mismatch repair protein MutL [Neisseria sp. oral taxon 014 str. F0314] Length = 665 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 216/665 (32%), Positives = 348/665 (52%), Gaps = 76/665 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA+++ +E +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDADATAIEVELAGGGIRLIRVSDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR + Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+S+ A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSNPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDF-INNAVELNEKSNEITLQGYTG 238 P ++F+ +K+ N ERI+ ++GEDF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPA----QNLHERIAAIVGEDFQAAASLEIDSGNGALRLYGAIA 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVN Sbjct: 239 KPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINK-------------------KGISTSSVLSK 339 VHP K+ IRFR+ + + ++ KA+ GI ++ S+ Sbjct: 299 VHPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTESVGNAGEVLHEITGIRPAATSSE 358 Query: 340 KMISSFHQDNAP------------------------KTHLPKYATSLTNTQEKLFLQENR 375 S FH + KT Y + Q L L+E+R Sbjct: 359 NEHSGFHPNPTASSENIFAAAPSAHTSEPRNAFSSGKTAPMPYQAARAPQQRSLSLRESR 418 Query: 376 LSTNDLLPSDDPTYSEDND-------------------------PVEESEATHYQLGIAC 410 + N T +++ D ++ + LG A Sbjct: 419 AALNTYAELFKNTAADEADIELAQFEQARFGSTSATSSENSARSFSDDPKPELPPLGFAI 478 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGE 469 AQ+ YI++Q D L+++D HAA ER+ +EKM++ + SQ LL P E Sbjct: 479 AQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEE 538 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 CA + +H + L G++ G N +A+R +PA+L K ++ L +D++ E+ ++ T+ Sbjct: 539 CAALADHADTLAGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLGELAQVGSSQTI 598 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 ++ +ILATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ Sbjct: 599 EEHENHILATMSCHGSVRAGRQLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELD 658 Query: 590 KLFGR 594 LF R Sbjct: 659 ALFLR 663 >gi|261400853|ref|ZP_05986978.1| DNA mismatch repair protein MutL [Neisseria lactamica ATCC 23970] gi|269209324|gb|EEZ75779.1| DNA mismatch repair protein MutL [Neisseria lactamica ATCC 23970] Length = 658 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 216/658 (32%), Positives = 341/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++GEDF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGEDFQTASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 ++ K + ++ KT Y + Q L L+E+R + N Sbjct: 359 DNENLFDSASDYPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQRSLSLRESRAAINTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSRFEQARFGNMPSETPAPQTDTPLSDGIPSPSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKM-RQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM RQ + ++ SQ LL P ECA + ++ Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRRENGRLQSQRLLIPVTFAASHEECAALADY 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R PA+L K ++ L RD++ E ++ T+++ I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAAPAMLGKSDVVSLARDVLGEFAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|319410690|emb|CBY91069.1| DNA mismatch repair protein MutL [Neisseria meningitidis WUE 2594] Length = 658 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 214/658 (32%), Positives = 340/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ + GGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E +I +A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMIELLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ S + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGSGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRANLTESVGNAGEVLHDITGVVSTPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 ++ K + ++ KT Y + Q L L+E+R + N Sbjct: 359 DSENLFDSASDYPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ G A AQ+ Y Sbjct: 419 LYKKTDDIDLELNRLEQARFGNMPSETPIPKTDTPLSDGLPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKM-RQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM RQ + K+ SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRRENGKLQSQRLLIPSTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R +PA+L K ++ L +D++ E+ ++ T+++ I Sbjct: 539 AEALAGFGLELSDMGGNTLAVRTVPAMLGKADVVSLAKDVLGELAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSVRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|91206202|ref|YP_538557.1| DNA mismatch repair protein [Rickettsia bellii RML369-C] gi|122990884|sp|Q1RGP6|MUTL_RICBR RecName: Full=DNA mismatch repair protein mutL gi|91069746|gb|ABE05468.1| DNA mismatch repair protein MutL [Rickettsia bellii RML369-C] Length = 611 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 250/610 (40%), Positives = 373/610 (61%), Gaps = 16/610 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE IN+IAAGE+IERP+ +KEL+EN++DA S++++ ++ GK+ I+D+G Sbjct: 1 MTIKLLSESTINRIAAGEVIERPASVVKELVENAVDAGSTKIDIILERAGKNLIIISDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK+ + DF NIHTFGFRGEALPSI A+S + + S+ N Sbjct: 61 VGMTDKELEIAVERHTTSKLDETDFLNIHTFGFRGEALPSIAAISKMLITSKKRDNQKAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G + P N GT +E+RDLFF PARL FL++++ E DV++++A+A+ Sbjct: 121 QIKLIGGDEKQIAPAIHNEGTKIEIRDLFFATPARLKFLRTDKTELAATVDVVKKIALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQS--TNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P++SF+ + K+ Q+ N +RI VIGEDFI NA ++ KS + ++ GYT Sbjct: 181 PEISFSLTHDGKTLLKLKGQNKDAENNLKQRIIDVIGEDFIKNASYIDFKSPDFSIYGYT 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 IPT+NR ++ ++FIN R V+DK + +R AY + +P RYP+ + L+IDP+ VDV Sbjct: 241 SIPTYNRASSEDQFLFINNRPVKDKLLQVALRVAYQDYMPRDRYPLCAIFLQIDPQLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL-- 355 NVHPAK+ +RF +P +RN +I SI+ A++ K S+ ++ I F K Sbjct: 301 NVHPAKAEVRFHDPNYVRNLLIDSIKNALSNKSHIASTTIASSAIELFKNPFVNKEPAIS 360 Query: 356 ---------PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 +Y + + T K + D LP + E + + Sbjct: 361 KPLNVNSKPSEYRPATSPTVPKYTPNNSCQKLIDTLPHARIEQEVEQRIQNEPQKSSQYR 420 Query: 407 -GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 G A AQ+H Y+ISQT D +VI DQHAAHERL +EK++ + ++ Q LL PEI++L Sbjct: 421 LGAAKAQLHTTYVISQTEDSIVITDQHAAHERLGYEKIKNYIKNEELIKQRLLIPEIVEL 480 Query: 466 L-EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 E ++ E+ + L +LG+ E+FG +I + EIP IL N+ +L++D+ D + + Sbjct: 481 PDEKRADILYENKDKLSKLGLSLEKFGEKSIIVTEIPNILGDINVQKLIQDLADHLAECG 540 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 L + IE++ T AC+ SIR+GRK+ + EMN LLR+ME P S QCNHGRPT+I+LK Sbjct: 541 ENIALTELIEHVTETYACHYSIRAGRKLSADEMNALLRQMENTPFSGQCNHGRPTYIELK 600 Query: 585 LSDIEKLFGR 594 L DIE+LFGR Sbjct: 601 LKDIERLFGR 610 >gi|115350714|ref|YP_772553.1| DNA mismatch repair protein [Burkholderia ambifaria AMMD] gi|115280702|gb|ABI86219.1| DNA mismatch repair protein MutL [Burkholderia ambifaria AMMD] Length = 661 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 199/644 (30%), Positives = 332/644 (51%), Gaps = 59/644 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA ++ + V+ GG ITD+G G Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGATTLRIVLEEGGVKRISITDDGCG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+P+A+ RH TSKI ++ + T GFRGEAL SI +V+ +++ SR + + Sbjct: 83 IPPDELPLALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMSITSRTAEVAHATK 142 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ P A GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 143 I---DATTGALSPAAGAVGTTIEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRAALARP 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N +R+++++G+ F + L+E++ + + G G+P Sbjct: 200 DVAISVLHNGKAVEHWNATEP----AQRVAKILGDGFATAHLPLDEQAGPLAVYGCAGLP 255 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 256 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 315 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---SKKMISSFHQDNAPKTHLP- 356 P+K +RFR+ I ++ ++Q+A+ + ++ +S A + P Sbjct: 316 PSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAQLSPAPGGPASFLNTPL 375 Query: 357 -------------KYATSLTNTQEKLFLQENRLS-------------------------- 377 +S +++ ++++ R++ Sbjct: 376 GLGAASGTGGSGFSSPSSSSSSAGNTWMRQARMTQGTLPVAQPLALYDALFGRKDTGAGT 435 Query: 378 -------TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 +D + P+ + LG A QIH Y+++Q GLVIVD Sbjct: 436 PDGTTVIAHDSASAPTMPPGFVASPLAATAHDEQPLGFALGQIHGIYVLAQNAHGLVIVD 495 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 HAAHER+++E+ + I Q+LL P + E + E + L LG Sbjct: 496 MHAAHERILYEQFKNALADRTIAVQSLLLPISMTATPVEIGTVEEERDTLESLGFDLAVL 555 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 P +AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ ++R+ R Sbjct: 556 SPTTLAIRAVPALLKDADLQSLARAVLADLHAFGGSRVLTERQHELLGTLACHHAVRANR 615 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ EMN LLR+ME + QCNHGRPT+ +L L+D+++LF R Sbjct: 616 RLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLNDLDRLFMR 659 >gi|325136514|gb|EGC59118.1| DNA mismatch repair protein MutL [Neisseria meningitidis M0579] Length = 658 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 213/658 (32%), Positives = 339/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ + GGG ++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGGGIRLIHVSDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSLLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAATHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ S + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGSGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRANLTESVGNAGEVLHDITGVVSTPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 ++ K + ++ KT Y ++ Q L L+E+R + N Sbjct: 359 DSENLFDSVSNYPTGNKSDTHNAFGSSGKTAPMPYQSAYAPQQRSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSRFEQARFGNMPSETPAPQTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R PA+L K ++ L RD+++E ++ T+++ +I Sbjct: 539 AEALAGFGLELSDMGGNTLAVRAAPAMLGKSDVVSLARDVLNEFAQVGSSQTIEEHENHI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|255066273|ref|ZP_05318128.1| DNA mismatch repair protein MutL [Neisseria sicca ATCC 29256] gi|255049483|gb|EET44947.1| DNA mismatch repair protein MutL [Neisseria sicca ATCC 29256] Length = 664 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 215/664 (32%), Positives = 346/664 (52%), Gaps = 75/664 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ +E +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIEVELAGGGIRLIRVSDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS L L SR + Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLILTSRQDGSAHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+S+ A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSNPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++GEDF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGEDFQAASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK-------------------KGISTSSVLSKK 340 HP K+ IRFR+ + + ++ KA+ GI ++ S+ Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTESVSNAGEVLHEITGIRPTATSSEN 358 Query: 341 MISSFHQDNAP------------------------KTHLPKYATSLTNTQEKLFLQENRL 376 F Q+ KT Y + Q L L+E+R Sbjct: 359 EHHQFLQNPTASSENIFAAAPNTHASEPRSTFGSGKTAPMPYQAARAPQQRSLSLRESRA 418 Query: 377 STNDLLPSDDPTYSEDND-------------------------PVEESEATHYQLGIACA 411 + N T +++ D ++ + LG A A Sbjct: 419 ALNTYAELFKNTAADEADIELAQFEQARFGNTTATSSENPARAFSDDPKPELPPLGFAIA 478 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGEC 470 Q+ YI++Q D L+++D HAA ER+ +EKM++ + SQ LL P EC Sbjct: 479 QLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQRLLIPVTFAASHEEC 538 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 A + +H + L G++ G N +A+R +PA+L K ++ L +D++ E+ ++ T++ Sbjct: 539 AALADHGDTLAGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLGELAQVGSSQTIE 598 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 + +ILATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ Sbjct: 599 EHENHILATMSCHGSVRAGRQLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDA 658 Query: 591 LFGR 594 LF R Sbjct: 659 LFLR 662 >gi|294787957|ref|ZP_06753201.1| DNA mismatch repair protein MutL [Simonsiella muelleri ATCC 29453] gi|294484250|gb|EFG31933.1| DNA mismatch repair protein MutL [Simonsiella muelleri ATCC 29453] Length = 626 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 218/626 (34%), Positives = 339/626 (54%), Gaps = 37/626 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L +INQIAAGE++ERP+ A+KE++ENSLDA +S+V I GGG ++TDNG Sbjct: 3 RIAQLPNHLINQIAAGEVVERPANALKEILENSLDAGASQVSVEITGGGIKLIRVTDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++P+A+ RH TSKI D ++ + GFRGE L SI +VS LTL SR + Sbjct: 63 GIHADDLPLALSRHATSKIKNLSDLEHVRSMGFRGEGLASIASVSRLTLTSRTAELPHAH 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I +S + + GT VEV +LFF PAR FLKSE E ++ R+A+A Sbjct: 123 EIRAEDGVLSPIAAASHPIGTTVEVCELFFNTPARRQFLKSENTEYAHCATMLERLALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F+ + + Q+ +R+ ++GEDF + ++ N + + G+ Sbjct: 183 PQVAFSLKNNGKSVFNYPAQT----LAQRVGTIVGEDFQAACLPVDSGENILRVHGFVSK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ + F+N R V+DK IL ++ AY + + P VL L+I P VDVNV Sbjct: 239 PTFAKGKSDMQFCFVNNRFVRDKVILHAVKQAYRDVLHNQIVPAFVLFLDIPPELVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-------------------K 340 HP K+ +RFR+ + I ++ K + + + +S K Sbjct: 299 HPTKTEVRFRDSQAVHQLIFHNLNKVLAETRADVTDSVSNAGDILHERILPNDTFSGSLK 358 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL------------LPSDDPT 388 +S + N K YA Q L L+E+R + N L Sbjct: 359 SENSNNYSNNQKVAPANYAAFRAPIQRNLSLKESRAAMNTYAELYRQDNELAELEQTRLN 418 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + +N E Y LG A AQ+ YI+SQT++GL++VD HAA ER+ +EKM+ Sbjct: 419 VAPENPKNNHVENQEYPLGFALAQLLGIYILSQTSEGLILVDMHAAAERVNYEKMKTQRL 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 S + +Q LL P E A + +H + LH G++ + G IAI IPA+L + + Sbjct: 479 SGSLKTQMLLIPMRFQATHEERATLADHADTLHEYGLQLQDLGDGQIAILAIPAMLGQAD 538 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 L +D++ E+ ++ ++ I++TMAC+GS+R+GR++ EMN LLR+ME P Sbjct: 539 AVALAQDVLRELACVGSSQIVEKLENQIISTMACHGSVRAGRQLTQPEMNALLRDMENTP 598 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 S+QCNHGRPT+++L L+D++ LF R Sbjct: 599 RSNQCNHGRPTWVRLALTDLDALFLR 624 >gi|332283318|ref|YP_004415229.1| DNA mismatch repair protein [Pusillimonas sp. T7-7] gi|330427271|gb|AEC18605.1| DNA mismatch repair protein [Pusillimonas sp. T7-7] Length = 624 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 203/624 (32%), Positives = 333/624 (53%), Gaps = 38/624 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +L + +I+QIAAGE+IERP+ +KEL+EN++DA + +E + GGG ++D+G Sbjct: 6 SIAQLPDLLISQIAAGEVIERPASVLKELLENAIDAGARAIEVRLDGGGIRRISVSDDGS 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A+ RH TSKIS D+ +++ GFRGEAL S+ +V+ LTL SR Sbjct: 66 GIPKSELKLALTRHATSKISSLDELEAVNSMGFRGEALASVASVARLTLTSRSAAEPHAW 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ + + GT ++VR LF +PAR FL++E E D + R+A+A+ Sbjct: 126 QIEAEQDE---PSAASGSMGTTIDVRQLFDNVPARRKFLRAEATEYGHCVDALERIALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + +R+ V+G++F + + + + I+LQG Sbjct: 183 PHIAFRLFHNDKAQRNWRA----SEVGQRVRDVLGQEFTDQGLYVEHEQGLISLQGVITR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT+ R A++ Y+++NGR V+D+ + +R AYA+ + R P VL L IDP VDVNV Sbjct: 239 PTYARSRADRQYLYVNGRYVKDRTVAHAVRQAYADVLHGDRQPAFVLFLTIDPAMVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +RFR I F+ Q++ + ++ G + + A YA Sbjct: 299 HPAKHEVRFRESGAIHRFVNQTLTQVLSAAGGQSLATSELAANHPTESAQAGTMSTDSYA 358 Query: 360 TSL-------------------------TNTQEKLF----LQENRLSTNDLLPSDDPTYS 390 T Q++ F R L + Sbjct: 359 TEPGIHQPAPTGAGGIADGQAPIPAPYRPQQQQQTFRLHEQAPGRKQDWQSLYRPLDAPA 418 Query: 391 EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 D + + A + LG+A Q+H YI++Q DGLV+VD HAAHER+++E++++ ++ Sbjct: 419 VHADVADSTGAAEFPLGMALGQLHGIYILAQNHDGLVLVDMHAAHERVVYEELKKAMDAQ 478 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 + Q LL P + + E + LI EH L+ LG+ GPN+ A+R +PA+L+ +I Sbjct: 479 SLPRQELLVPVVFNATEKDIGLIEEHAHTLNELGLSIRPAGPNSAAVRAVPALLANGDIE 538 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 L R ++ ++ + L ++ +L+TMAC+GS+R+ R++ EMN LLR+ME+ + Sbjct: 539 ALARSVLRDLASVGVSPRLTEQRNELLSTMACHGSVRANRRLTLDEMNGLLRKMEQTERA 598 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+++ K+ +++KLF R Sbjct: 599 DQCNHGRPTWVQWKVGELDKLFMR 622 >gi|187477234|ref|YP_785258.1| DNA mismatch repair protein [Bordetella avium 197N] gi|123752220|sp|Q2KX20|MUTL_BORA1 RecName: Full=DNA mismatch repair protein mutL gi|115421820|emb|CAJ48337.1| DNA mismatch repair protein [Bordetella avium 197N] Length = 621 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 204/621 (32%), Positives = 331/621 (53%), Gaps = 35/621 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +L + +I+QIAAGE+IERP+ +KE++EN++DA + +E + GGG ++D+GF Sbjct: 6 PIAQLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEIRLEGGGIRRIAVSDDGF 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+P+AV +H TSKI + ++ + GFRGEAL SI +V+ LT++SR + Sbjct: 66 GIPPEELPLAVAQHATSKIRSLSELESVASMGFRGEALASIASVARLTIISRVRNGDHAW 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI S +I P + PGT V+VR LF +PAR FL+SE E D + R+A+A Sbjct: 126 QIDASSGEI---SPASGPPGTTVDVRQLFDNVPARRKFLRSEATEFGHCLDALERIALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++F + + + +RI V+G +F A+ ++ + I L G Sbjct: 183 PQIAFRLFHHDKAQRQWLP----ADPGQRIRDVLGAEFAGQALPVDTRYGAIGLMGMVTR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT R A++ Y+++NGR V+D+ + +R+AYA+ + R P VL LE+DP VDVNV Sbjct: 239 PTAARARADRQYLYVNGRYVRDRTVSHALRSAYADVLHGDRQPAYVLYLEVDPAAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN---------- 349 HPAK +RFR+ + F+ Q + +A+ + G + + + Sbjct: 299 HPAKHEVRFRDSGAVHRFVSQVVGQALAQTGGAQALDAEDPPPEPIRPETPPPPSLSPAA 358 Query: 350 ----------------APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P + +P + + R + Sbjct: 359 ALPSAPAQPPAAPYPSRPHSQMPFRLQEPAGVSARDWQSLYRPLAEPGATPQTADRPQAA 418 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 P + LG+A Q+H YI++Q GLV+VD HAAHER+++E+++ + + Sbjct: 419 APARLVSEEEHPLGMALGQLHGVYILAQNARGLVLVDMHAAHERVVYEQLKHALDERSLP 478 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 Q LL P + E + AL E+ E L LG + GP +IA+R +PA+L++ +I L Sbjct: 479 RQDLLVPVVFHAQEKDVALAEEYAEQLSELGFEMRPSGPTSIAVRSVPALLARGDIEGLA 538 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 R ++ ++ + L ++ +L+TMAC+GS+R+ R++ EMN LLR+ME + QC Sbjct: 539 RAVLRDLGAVGASQLLTEQRNELLSTMACHGSVRANRRLTIEEMNALLRQMEATERADQC 598 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 NHGRPT+I+ ++D++KLF R Sbjct: 599 NHGRPTWIQWTVNDLDKLFLR 619 >gi|117924347|ref|YP_864964.1| DNA mismatch repair protein MutL [Magnetococcus sp. MC-1] gi|117608103|gb|ABK43558.1| DNA mismatch repair protein MutL [Magnetococcus sp. MC-1] Length = 632 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 231/624 (37%), Positives = 358/624 (57%), Gaps = 31/624 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++++L E + NQIAAGE++ERP+ IKEL+ENS+DA +S +E GGK Q+ DNG Sbjct: 8 RVQQLPETLANQIAAGEVVERPASVIKELVENSIDAGASLIEVKAEQGGKRLMQVVDNGH 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ +E +A+ RH TSKI +D I T GFRGEALPS+G+V+ L L +R +N G Sbjct: 68 GMSEDEASLALTRHATSKIHTAEDLFRIATLGFRGEALPSVGSVAQLELATRIEENADGV 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + + +AM GT V VR+LFF PARL FLK+++ E N I ++++R AIAY Sbjct: 128 ALTVMGGARQASKRLAMPVGTRVTVRNLFFNTPARLKFLKADRTEANQIMELMQRFAIAY 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F S + + ER+ V+G +FI N +E+N ++ ++G+ G+ Sbjct: 188 PHVGFKLSLNGKEVQHYRAVADESAYVERLGAVLGAEFIPNCMEINSGDAQMRVRGWVGL 247 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT NRG+A+ ++F+NGR V+DK + + +R AY + +P R+P+ L +++DP +VDVNV Sbjct: 248 PTLNRGSASAMHLFVNGRWVRDKVVTAAVREAYRDLMPRERFPLTALFVQVDPEEVDVNV 307 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN---------- 349 HPAK+ +RFR+ + + +++ + ++ G + S+ Sbjct: 308 HPAKAEVRFRHGQSVYGLLRRTLAEVLHGMGARCYQASEAPLQSAEEPPEYGADLGKQRL 367 Query: 350 -----------APKTHLPKYATSLTNTQEKLFLQENRLSTNDLL-------PSDDPTYSE 391 P+ P Y + + L S P Sbjct: 368 AEPVQLPAAVSQPERWRPSYPPAGEGVPRAAAVANWSPQRQGALPLQSRDSYSPAPGQPR 427 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST- 450 P E+ H LG A AQ+H YI++Q+ G+V++DQHAAHER+++E+M+ + Sbjct: 428 PTAPHHEAAMDHGPLGQAVAQLHNLYIVAQSEQGMVLIDQHAAHERIVYERMKGAWARKE 487 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 K+ +Q LL PE++ L E E + L +LGI E FG NA IRE+PA+L++ I Sbjct: 488 KVETQMLLMPEVLQLSEVEAERMSHWRSTLQQLGIAVEPFGQNAFVIREVPALLARGQIA 547 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 L+RD+++++ L + + +LA+MAC+GS+RSGR + EMN LLREME+ P++ Sbjct: 548 PLVRDVVEQLEQVGQESALSEAQDAVLASMACHGSVRSGRALTREEMNALLREMERTPHT 607 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT ++L L+D+E+LF R Sbjct: 608 GQCNHGRPTHVRLSLADLERLFER 631 >gi|260438406|ref|ZP_05792222.1| DNA mismatch repair protein HexB [Butyrivibrio crossotus DSM 2876] gi|292808992|gb|EFF68197.1| DNA mismatch repair protein HexB [Butyrivibrio crossotus DSM 2876] Length = 627 Score = 535 bits (1378), Expect = e-149, Method: Composition-based stats. Identities = 191/630 (30%), Positives = 310/630 (49%), Gaps = 41/630 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + IN+IAAGE+++RPS +KEL+EN++DA ++ + I GG S +ITDNG Sbjct: 1 MAINLLDKNTINKIAAGEVVDRPSSVVKELVENAIDAGATAITVEIKDGGISLIRITDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ +A RH TSKI D + I + GFRGEAL SI AV+ + L+++ TG Sbjct: 61 CGIDKNEVRLAFLRHSTSKIKSAADLAGISSLGFRGEALSSISAVAQVELITKTKDALTG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + I G V GT VR+LF+ PAR FLK+ E I+ ++ + ++ Sbjct: 121 TRYQIDGGTEKVFEEVGAPDGTTFLVRNLFYNTPARRKFLKTPATEGGYISSLMENLCLS 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P++S F + + + NG + I V G + +N +E++ + N+ +++GY G Sbjct: 181 HPEISIRFINNNQPKIQ---TTGNGKLKDNIYVVYGREITSNLLEIDRQFNDYSIKGYVG 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P +RGN N +INGR V+ + I AYA I +YP L + I+P +DVN Sbjct: 238 KPLISRGNRNFENYYINGRYVKSNIVARAIEDAYAGFIMQHKYPFTSLHITINPELLDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-KMISSFHQDNAPKTH--- 354 VHP+K +RF N I N + +SI A+ + + L K K + K Sbjct: 298 VHPSKMELRFSNEQEIYNNVKESILLALTHRELIPEINLEKAKKEEPLKVEYNKKEPDTV 357 Query: 355 ------------------------LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 +P+ L + + + R + + + Sbjct: 358 VNYEKAVEKQPETVNEKEPVIVRKVPEVKKPLVSARMPEPFETKRAVVYEEVVKEIKQQE 417 Query: 391 EDNDPV-----EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 E E + + + Q+ Y I + + + IVDQHAAHE+++FE+ + Sbjct: 418 EPKQLELFKVNELLKKENKKDIKIIGQLFDTYWIMEFENSMYIVDQHAAHEKVLFERFMK 477 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 +N ITSQ + P + L E + +++E L + G + E FG +AIR IPA S Sbjct: 478 RYNDRSITSQMINPPVVFSLTTEEQNVYKDNEEYLAQFGYEIEDFGGGELAIRGIPADFS 537 Query: 506 KKNIPQLLRDIIDEI-IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 + + ++ +I+D + ID + I+N +ATM+C +++ ++ EM +L+ E+ Sbjct: 538 EADPKEIFTEIMDSLCIDYGKNT--PETIKNRIATMSCKAAVKGNNRLNIKEMEKLMDEL 595 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + N C HGRPTFI + ++EK F R Sbjct: 596 MELENPYNCPHGRPTFITISKYELEKKFKR 625 >gi|254805223|ref|YP_003083444.1| DNA mismatch repair protein MutL [Neisseria meningitidis alpha14] gi|254668765|emb|CBA06657.1| DNA mismatch repair protein MutL [Neisseria meningitidis alpha14] Length = 658 Score = 535 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 214/658 (32%), Positives = 346/658 (52%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR + Sbjct: 63 GIHPDDIKLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ S + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGSGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGVVSTPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLL- 382 ++ K + ++ KT Y + Q L L+E+R + N Sbjct: 359 DSENLFDSASDYPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQRSLSLRESRAAMNTYAE 418 Query: 383 ----------------------PSDDPTYSEDNDPVEE---SEATHYQLGIACAQIHQNY 417 + + + P+ + S++ LG A AQ+ Y Sbjct: 419 LYKKTDGIDLELNRLEQARFGNMPSEMPIPKTDAPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-KITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ K+ SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGKLQSQRLLIPVTFAASHEECAALSDH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 + L G++ G N +A+R +PA+L K ++ L +D++ E+ ++ T+++ +I Sbjct: 539 ADALAGFGLELSDMGGNTLAVRAVPAMLGKADVVSLAKDVLGELAQVGSSQTIEEHENHI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNVLLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|296314214|ref|ZP_06864155.1| DNA mismatch repair protein MutL [Neisseria polysaccharea ATCC 43768] gi|296839113|gb|EFH23051.1| DNA mismatch repair protein MutL [Neisseria polysaccharea ATCC 43768] Length = 658 Score = 535 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 213/658 (32%), Positives = 342/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ +E +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIEVELAGGGIRLIRVSDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQNDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ S + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPTQS----LHERIAAIVGDDFQTASLEIDSGSGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 +++ K + ++ KT Y ++ Q L L+E+R + N Sbjct: 359 DSENLFNRASNYPTGNKPDTRNAFGSSGKTAPMPYQSAYAPQQRSLPLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSRFEQARFGNMPSETPAPKTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + ++ Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPVTFAASHEECAALADY 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R PA+L K ++ L +D+++E ++ T+++ I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAAPAMLGKADVVSLAKDVLNEFAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSVRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|288940953|ref|YP_003443193.1| DNA mismatch repair protein MutL [Allochromatium vinosum DSM 180] gi|288896325|gb|ADC62161.1| DNA mismatch repair protein MutL [Allochromatium vinosum DSM 180] Length = 642 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 206/637 (32%), Positives = 354/637 (55%), Gaps = 44/637 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR LS+ ++NQIAAGE++ERP+ IKELIENSLDA +R+E + GG ++ D+G Sbjct: 4 PIRVLSDHLVNQIAAGEVVERPASVIKELIENSLDAGCARLEIDVEQGGIKRLRVRDDGR 63 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSR-------- 111 G+ +++ +A+ RH TSK+ + D + T GFRGEALPSI +VS LTL SR Sbjct: 64 GIARDQLALALARHATSKLFELADLEAVGTLGFRGEALPSIASVSRLTLTSRVRPDSDDA 123 Query: 112 ---PPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLI 168 ++ ++ RP A GT VEVRDLFF PAR FL++E+ E + + Sbjct: 124 ASDRAGDSAWEVAVAIDGRLEGPRPAAHPSGTSVEVRDLFFNTPARRKFLRTEKTEFDHV 183 Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQST-NGNFPERISQVIGEDFINNAVELNEK 227 V+RR+A+A P V+ +++ + R+ +++G F ++E++ Sbjct: 184 DQVVRRLALARPDVALELRHNGRVVHQLPAADGRPESVLARLDRLLGAGFAEQSLEIDVS 243 Query: 228 SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLL 287 + ++ L G+ P F+R +Q + ++NGR ++D+ I IR A+++ + R+P VL Sbjct: 244 AVDLRLHGWVRRPAFSRSQPDQQFFYVNGRLIRDRLITHAIRQAFSDFLHQARHPGYVLF 303 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 LE+ PR VDVNVHPAK +RFR + +FI +++Q+ + + + + + +S Sbjct: 304 LELPPRLVDVNVHPAKHEVRFRESRQVHDFIQRALQRRLAQGVLGGAESDAPMPETSGMA 363 Query: 348 -------------------DNAPKTHLPKYATSLTNTQ-----------EKLFLQENRLS 377 D+A + P S T+ +++ L Sbjct: 364 AGAFGGAPDRLAGSPGGGGDSAIQYRSPPPRASGVGTRHPTSALGVGDGRRVYQASLALQ 423 Query: 378 TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 + + D +P + LG A AQ++ Y+++++ +GL++VD HAAHER Sbjct: 424 RPAVDAARAARAGGDTEPSVAAATDLPPLGFALAQLNGVYLLAESAEGLILVDIHAAHER 483 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 + +E++++ +++ ++TSQ LL P + + E + E E L RLG+ +R G + + + Sbjct: 484 IGYERLKRAWSAGRVTSQPLLVPHSLQVDPREADRLEEQRETLARLGLVLDRLGIDRVVV 543 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 RE+PA+L + ++ L+RD++ ++ + L++ I+++LAT+AC+GS+R+ R++ EM Sbjct: 544 REVPALLRQADMDALVRDLLADLAAQGESTRLEEAIDSVLATLACHGSVRANRRLTLDEM 603 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N LLR+ME+ QCNHGRPT+++L +D+++LF R Sbjct: 604 NALLRDMERTERIDQCNHGRPTWVRLSHADLDRLFLR 640 >gi|302386430|ref|YP_003822252.1| DNA mismatch repair protein MutL [Clostridium saccharolyticum WM1] gi|302197058|gb|ADL04629.1| DNA mismatch repair protein MutL [Clostridium saccharolyticum WM1] Length = 639 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 192/641 (29%), Positives = 310/641 (48%), Gaps = 51/641 (7%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I L + IN+IAAGE+IERP+ +KEL+EN++DA ++ V I GG S ++TDN Sbjct: 1 MPNITVLDQNTINKIAAGEVIERPASVVKELLENAIDARATAVTVEIKEGGTSLIRVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ EE+ +A RH TSKI +D + + GFRGEAL SI AVS + L+++ T Sbjct: 61 GCGIPKEEVSLAFLRHSTSKIKSVEDLFTVSSLGFRGEALASIAAVSQVELITKTSIGLT 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G + S+ V GT R+LF+ PAR FLK+ E + +++ ++A+ Sbjct: 121 GTRYQIDGGQERSMEEVGAPEGTTFIARNLFYNTPARKKFLKTPMTEGAHVAELVEKLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P+VS F N+ S N N + + V G + N +E+ K E+++ GY Sbjct: 181 SHPEVSIRFIQNNQNKLH---TSGNHNLKDIVYTVFGREIAANLLEVTVKKPEVSIHGYI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P +RGN N FINGR ++ I I AY + +YP +L IDP +DV Sbjct: 238 GKPVISRGNRNYENYFINGRYIKSSIISRAIEEAYKPFMMQHKYPFTMLHFSIDPEMLDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST----------------------SS 335 NVHP K +RFR+ +I + + Q++ A+ K + Sbjct: 298 NVHPTKMELRFRDGEMIYHMVYQAVSSALAHKELIPEVKLEKKAEEKKGFLEKKHEPSPE 357 Query: 336 VLSKKMISSFHQDNA-----------PKTHLPKYAT-----------SLTNTQEKLFLQE 373 K+ + + Q A PK P A+ L + Q+ Sbjct: 358 PFEKRRLMAIEQQAAALENKELSIPFPKRLTPPPASLLMERDELGDNWLKPKAPDIDSQQ 417 Query: 374 NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 + ++ T D + E + Q+ Y + + + L I+DQHA Sbjct: 418 EVPPVPAVSKQEEKTEQLDLFDGKLLEPKARSMHKLIGQVFDTYWLVEFHEQLYIIDQHA 477 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 AHE++++EK S + SQ + P I+ L + E AL+ H + +G + E FG Sbjct: 478 AHEKVLYEKTMGTLKSKEYLSQLVSPPIILTLNQNEEALLKRHLKYFTDIGFEIEPFGGR 537 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQ 553 A+R +PA L +LL ++ID + + ++++ D I +A+++C +++ G ++ Sbjct: 538 EYAVRGVPANLFSIAKKELLIEMIDGLSEDGSSHS-PDIIYEKVASLSCKAAVKGGHRLS 596 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + E N L+ ++ N C HGRPT I + ++EK F R Sbjct: 597 AAEANELIDQLLNLENPYACPHGRPTIISMSKYELEKKFKR 637 >gi|172059745|ref|YP_001807397.1| DNA mismatch repair protein [Burkholderia ambifaria MC40-6] gi|171992262|gb|ACB63181.1| DNA mismatch repair protein MutL [Burkholderia ambifaria MC40-6] Length = 661 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 200/644 (31%), Positives = 331/644 (51%), Gaps = 59/644 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA +S + V+ GG ITD+G G Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGASTLRIVLEEGGVKRISITDDGCG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+P+A+ RH TSKI ++ + T GFRGEAL SI +V+ +++ SR + Sbjct: 83 IPPDELPLALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMSITSRTADVAHATK 142 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ P A GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 143 I---DATTGALSPAAGAVGTTIEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRAALARP 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N +R+++++G+ F + L+E++ + + G G+P Sbjct: 200 DVAISVLHNGKAVEHWNATEP----AQRVAKILGDGFATAHLPLDEQAGPLAVYGCAGLP 255 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 256 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 315 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---SKKMISSFHQDNAPKTHLP- 356 P+K +RFR+ I ++ ++Q+A+ + ++ +S A + P Sbjct: 316 PSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAQLSPAPGGPASFLNTPL 375 Query: 357 -------------KYATSLTNTQEKLFLQENRLS-------------------------- 377 +S +++ ++++ R++ Sbjct: 376 GLGAATGTGGSGFSSPSSSSSSAGNTWMRQARMTQGTLPVAQPLALYDALFGRKDTGAGT 435 Query: 378 -------TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 +D + P+ + LG A QIH Y+++Q GLVIVD Sbjct: 436 PDGTTVIAHDSASAPTTPPGFVASPLAATAHDEQPLGFALGQIHGIYVLAQNAHGLVIVD 495 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 HAAHER+++E+ + I Q+LL P + E + E + L LG Sbjct: 496 MHAAHERILYEQFKNALADRTIAVQSLLLPISMTATPVEIGTVEEERDTLESLGFDLAVL 555 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 P +AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ ++R+ R Sbjct: 556 SPTTLAIRAVPALLKDADLQSLARAVLADLHAFGGSRVLTERQHELLGTLACHHAVRANR 615 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ EMN LLR+ME + QCNHGRPT+ +L L+D+++LF R Sbjct: 616 RLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLNDLDRLFMR 659 >gi|78485428|ref|YP_391353.1| DNA mismatch repair protein MutL [Thiomicrospira crunogena XCL-2] gi|78363714|gb|ABB41679.1| DNA mismatch repair protein MutL [Thiomicrospira crunogena XCL-2] Length = 630 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 210/614 (34%), Positives = 352/614 (57%), Gaps = 22/614 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + +QIAAGE++ERP+ +KEL+EN+LD+ ++++E I GG+ + DNG G Sbjct: 15 ISLLPSHLADQIAAGEVVERPASVVKELLENALDSGATQIEIQIEEGGEKLISVIDNGMG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++ +AV RH TSKI D + + T GFRGEAL SI +VS LTL S+ + Q Sbjct: 75 IRQSQLMLAVSRHATSKIHTAQDLAAVATLGFRGEALASISSVSRLTLTSKFQGESAAWQ 134 Query: 121 IAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + S P A GT VEV+DLFF PAR FL++ + E I +++R+ ++ Sbjct: 135 LSGEGEGRWSEPTPTAHPQGTHVEVKDLFFNTPARKKFLRAARTEFMHIDQLVKRVMLSR 194 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++S + +++ + +R+ Q++G F++ ++ELN ++ +I L G+ G Sbjct: 195 PEISMKLVHNQKVVRQVHAAHDDAALKQRLKQLMGTPFVDQSLELNFEAQDIQLSGWVGQ 254 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 TFNR + Y+F+NGR V+D+ + ++ AYA+ + GR+P +L L I VDVNV Sbjct: 255 ATFNRSQTDMQYLFVNGRIVRDRLLSYAVKQAYADVLYHGRHPAYLLFLNIPHDLVDVNV 314 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--FHQDNAPKTHLPK 357 HPAK +RF N + +F+ +S+++A+ + S+ + +I S F +++ ++H Sbjct: 315 HPAKYEVRFANGRWVYDFLRRSVREAVTQPVGVASNPNNAALIPSNVFSGNHSGESHQMD 374 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPS--------DDPTYSEDNDPVEESEATHYQL--- 406 S + Q ++ S + S D T + E++A Sbjct: 375 SQVSQSAMQFQMPSSSASGSGMGVSESVPYYAMAPDAETVESLKNRFHEADAYSQNSTPI 434 Query: 407 -GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK-----MRQDFNSTKITSQTLLTP 460 G A AQIH +I+++ GLV+VD HAAHER+++E+ M+Q + ++ SQ LL P Sbjct: 435 LGYAKAQIHGVFILAENEKGLVLVDMHAAHERIVYERIVYERMKQQWQQDRLISQPLLVP 494 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 ++ L + + + E+ +LG +AE FGP + +P++LSK +IP+L+ D+I ++ Sbjct: 495 IVVSLESSQVQVWEAYQEEFQKLGFEAEAFGPEQLKFTMVPSLLSKSDIPRLINDMIADL 554 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + T + ++I IL+TMAC+GS+R+ R + EMN LLR+ME +S+QCNHGRPT+ Sbjct: 555 AVAGQTQLVDEKINAILSTMACHGSVRANRHLTLDEMNALLRDMEATESSAQCNHGRPTW 614 Query: 581 IKLKLSDIEKLFGR 594 ++L + ++ LF R Sbjct: 615 VQLSMEQLDGLFMR 628 >gi|206561596|ref|YP_002232361.1| DNA mismatch repair protein [Burkholderia cenocepacia J2315] gi|198037638|emb|CAR53580.1| putative DNA mismatch repair protein [Burkholderia cenocepacia J2315] Length = 665 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 198/648 (30%), Positives = 326/648 (50%), Gaps = 63/648 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA +S + V+ GG ITD+G G Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGASTLRIVLEEGGVKRISITDDGCG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A+ RH TSKI ++ + T GFRGEAL SI +V+ +++ SR + Sbjct: 83 IPPDELALALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMSITSRTADAAHAMK 142 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 143 I---DAQTGVLSPAAGATGTTIEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRAALARP 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N +R+++++G+ F + L+E++ + + G G+P Sbjct: 200 DVAISVLHNGKAVEHWNATEP----AQRVAKILGDSFATAHLPLDEQAGPLAVYGCAGLP 255 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 256 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 315 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---SKKMISSFHQDNAPKTHLPK 357 P+K +RFR+ I ++ ++Q+A+ + ++ +S + A P Sbjct: 316 PSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAQLSPVPRGPASFLDTPL 375 Query: 358 YATSLTNT-----------------QEKLFLQENRLSTNDLLPSDDPTYSE--------- 391 + T ++++ R++ L + + Sbjct: 376 GQSQGHATGSGGSGFSSPSSSSSSSSGNTWMRQARMTQGTLPVAQPLALYDALFGRKDTG 435 Query: 392 -------------------------DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGL 426 P+ + LG A QIH Y+++Q GL Sbjct: 436 AGTPDGTTTLARDSADAPIAPLSGFTASPIATTTHDEQPLGFALGQIHGIYVLAQNAHGL 495 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 VIVD HAAHER+++E+ + + Q LL P + E + E + L LG Sbjct: 496 VIVDMHAAHERILYEQFKNALADRSVAVQALLLPISMTATPVEIGTVEEERDTLESLGFD 555 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 P +AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ ++ Sbjct: 556 LAVLSPTTLAIRAVPALLKDADLQSLARAVLADLHAFGGSRVLTERQHELLGTLACHHAV 615 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R+ R++ EMN LLR+ME + QCNHGRPT+ +L L+D+++LF R Sbjct: 616 RANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLNDLDRLFMR 663 >gi|83594278|ref|YP_428030.1| DNA mismatch repair protein [Rhodospirillum rubrum ATCC 11170] gi|123766944|sp|Q2RQ52|MUTL_RHORT RecName: Full=DNA mismatch repair protein mutL gi|83577192|gb|ABC23743.1| DNA mismatch repair protein MutL [Rhodospirillum rubrum ATCC 11170] Length = 629 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 237/630 (37%), Positives = 358/630 (56%), Gaps = 38/630 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++N+IAAGE++ERP+ A+KEL+EN++DA +SR++ + GG++ + D+G Sbjct: 1 MTIRLLPPVLVNRIAAGEVVERPASAVKELVENAIDAGASRIDITMTDGGRARILVVDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ +AV+RH TSK+ DD +IHT GFRGEALPSIG+V+ LTL SR Sbjct: 61 RGMDPGELSLAVERHATSKLPGDDLLDIHTLGFRGEALPSIGSVARLTLTSRAAGAGDAW 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G P + GT VEVRDLF+ PARL FLK+ + E DV+ R+A+A+ Sbjct: 121 ALTVEGGAKGEPEPASHPQGTRVEVRDLFYATPARLKFLKAPRTEQMHAVDVVHRLAMAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQG 235 P V FT S R ++ G E R+ ++G +F +NA+ + + I L G Sbjct: 181 PAVGFTLS--DGTRQQIRLSGAQGELFEARLTRLGAILGREFSDNAIAIEAEREGIRLTG 238 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 + +PT+N+ + Y+F+NGR V+DK + +R AY + + R V+ L L++ P V Sbjct: 239 HAALPTYNKATSAGQYLFVNGRPVRDKLLHGAVRGAYQDVLAHDRNAVLALYLDLPPEMV 298 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ-DNAPKTH 354 DVNVHPAK+ +RFR+P ++R II +++ A+ G SS +S + + + Sbjct: 299 DVNVHPAKAEVRFRDPGLVRGLIIGALRHALAAAGHRASSTVSLAALGALRPAQGSGAPA 358 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED---------------------- 392 LP A L+E R + P+ P Sbjct: 359 LPWGAGGYGGGASHPGLEERRSAYAAQAPAGTPDPWAGRGMGAGGGSGQAAMAWLAGAPP 418 Query: 393 -------NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 + A + LG A QIH YII+QT DG+VIVDQHAAHERL+ E+M+ Sbjct: 419 AAPRLAGEPEAPPTGAEDFPLGAARGQIHDTYIIAQTRDGVVIVDQHAAHERLVMERMKA 478 Query: 446 DFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 + Q LL PE+++L E + +L +LG+ E FGP A+ +RE+PA+L Sbjct: 479 ALAERGEVARQILLLPEVVELDEPGAVRVATAAAELAKLGLVVEGFGPGAVVVREVPALL 538 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 ++ L+ D+ + + + T L+DR+ +++ATMAC+GS+R+GR+++ EMN LLR+M Sbjct: 539 GDTDVKGLVADLAEGLAEWGTAQALEDRLGDVVATMACHGSVRAGRRLRIEEMNALLRDM 598 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 E+ P + QCNHGRPT+++L+L DIE+LFGR Sbjct: 599 ERTPRAGQCNHGRPTYVELRLGDIERLFGR 628 >gi|161525790|ref|YP_001580802.1| DNA mismatch repair protein [Burkholderia multivorans ATCC 17616] gi|189349489|ref|YP_001945117.1| DNA mismatch repair protein [Burkholderia multivorans ATCC 17616] gi|160343219|gb|ABX16305.1| DNA mismatch repair protein MutL [Burkholderia multivorans ATCC 17616] gi|189333511|dbj|BAG42581.1| DNA mismatch repair protein [Burkholderia multivorans ATCC 17616] Length = 662 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 200/647 (30%), Positives = 329/647 (50%), Gaps = 64/647 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA ++ + V+ GG ITD+G G Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGATTLRIVLEEGGVKRISITDDGCG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+P+A+ RH TSKI ++ + T GFRGEAL SI +V+ + + SR + Sbjct: 83 IPPNELPLALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMYITSRTADAAHATR 142 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 143 I---DAQTGVLSPAAGAVGTTIEVRELYFNTPARRKFLKSEQTEFGHCVEMIRRAALARP 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N +R+++++G+ F + L+E++ + + G G+P Sbjct: 200 DVAISVLHNGKAVEHWNATEP----AQRVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 255 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 256 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 315 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P+K +RFR+ I F+ ++Q+A+ + ++ + + H + AP+ +T Sbjct: 316 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGH--AAHLEPAPRGPASFLST 373 Query: 361 SLTNTQEKL-------------------FLQENRLSTNDLL------------------- 382 L + + +L++ R++ L Sbjct: 374 PLGQSPNQPASTGGSGFSSPSSSAPGSTWLRQARMTQGTLPVAQPLALYDALFGRKDTSA 433 Query: 383 -----------PSDDPTYSEDNDPVEESEATHYQLGIACA----QIHQNYIISQTTDGLV 427 + D + + A QIH Y+++Q GLV Sbjct: 434 ATPDATTATAGDAPDDSAAPLAGFAALPSAASMHDEQPLGFALGQIHGIYVLAQNAHGLV 493 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 IVD HAAHER+++E+ + + Q+LL P + E + E + L LG Sbjct: 494 IVDMHAAHERILYEQFKNALADRTVAVQSLLLPVSMTATPVEIGTVEEERDTLEALGFDL 553 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR 547 P ++AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ ++R Sbjct: 554 AVLSPTSLAIRAVPALLKDADLQALARAVLADLHAFGGSRVLTERQHELLGTLACHHAVR 613 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + R++ EMN LLR+ME + QCNHGRPT+ +L LSD+++LF R Sbjct: 614 ANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLSDLDRLFMR 660 >gi|308389547|gb|ADO31867.1| DNA mismatch repair protein [Neisseria meningitidis alpha710] Length = 658 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 216/658 (32%), Positives = 344/658 (52%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIGLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E T ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCTTMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS PERI+ ++G+DF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPTQS----LPERIAAIVGDDFQTASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRANLTESVGNAGEVLHDITGVVSTPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 ++ K + ++ KT Y + Q L L+E+R + N Sbjct: 359 DSENLFDSASDYPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ G A AQ+ Y Sbjct: 419 LYKKTDDIDLELNRLEQARFGNMPSETPIPKTDTPLSDGLPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKM-RQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM RQ + K+ SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRRENGKLQSQRLLIPSTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R +PA+L K ++ L +D++ E+ ++ T+++ I Sbjct: 539 AEALAGFGLELSDMGGNTLAVRTVPAMLGKADVVSLAKDVLGELAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSVRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|167758189|ref|ZP_02430316.1| hypothetical protein CLOSCI_00527 [Clostridium scindens ATCC 35704] gi|167664086|gb|EDS08216.1| hypothetical protein CLOSCI_00527 [Clostridium scindens ATCC 35704] Length = 652 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 190/651 (29%), Positives = 312/651 (47%), Gaps = 61/651 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L I++IAAGE+IERP+ +KEL+EN++DA ++ + T I GG S +I DNG Sbjct: 3 KIQVLDPVTIDKIAAGEVIERPASVVKELVENAIDAGATAIVTEIEEGGISMIRIADNGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + ++P A RH TSKI +D +I + GFRGEAL SI AVS + ++++ G Sbjct: 63 GMDASDVPNAFLRHSTSKIRTVEDLVHIGSLGFRGEALSSIAAVSQVEMITKTKDQVLGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I+G K + GT +R LF+ PAR FLK+ E + + D++ RMA+++ Sbjct: 123 RYRIAGGKEEELDETGARDGTTFLIRQLFYNTPARRKFLKTPMTEASHVGDLLTRMALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF F ++ S NGN + I V G + N + + +S + ++G+ G Sbjct: 183 PEISFQFINNGQSKLH---TSGNGNLKDVIYHVYGREIAANLLAADYESPGLKIRGFLGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +RGN N FINGR V+ I I AY + +YP VVL +EID VDVNV Sbjct: 240 PLISRGNRNFENYFINGRYVKSSIISKAIEDAYKDFTMQHKYPFVVLHIEIDGEHVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH----- 354 HP K +RF N + N I ++ ++ + + + ++ + H Sbjct: 300 HPTKMELRFNNQQEVYNSIYAAVDHGLHAEELIPHVEVDAPKAAAPMKQEGGAPHAAQKK 359 Query: 355 --------------LPKYATSLTNTQEKL------------------------------- 369 P S+ +E+ Sbjct: 360 DNPVVPDRTTSVQPAPSAKKSVPAPEERTLDYFMQKMKERVAAYHAQQNQEAPKKAPDVK 419 Query: 370 ----FLQENRLSTNDLLPSDDPTYSEDNDPVEES--EATHYQLGIACAQIHQNYIISQTT 423 ++ R + +D + ++ + EE+ E Q+ + Y + + Sbjct: 420 VSAQPSEDRREAPSDRVCETPEYAAQQLNLFEENLVERKVQAEYKIIGQVFETYWLVEFN 479 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 D L I+DQHAAHER+++EK + + + TSQ + P ++DL E L+ ++ + R+ Sbjct: 480 DSLYIIDQHAAHERVLYEKTLKSMKTREFTSQFISPPIVLDLSMQEAELLNQYMDQFTRI 539 Query: 484 GIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY 543 G + E FG + A+R +P L LL ++D + D + D I+ +A+M+C Sbjct: 540 GFEIEEFGQESYAVRAVPGNLFGIAKKDLLLQMLDGLSDEVSRNLSPDMIDEKVASMSCK 599 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ K+ + E++ L+ E+ N C HGRPT I + ++EK F R Sbjct: 600 AAVKGNMKLSATEVDSLIGELLTLENPYHCPHGRPTIIAMTKRELEKKFKR 650 >gi|293399028|ref|ZP_06643193.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae F62] gi|291610442|gb|EFF39552.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae F62] Length = 654 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 214/654 (32%), Positives = 338/654 (51%), Gaps = 65/654 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ V+ + GGG ++ DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ ++ + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNSALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL LE+ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLELPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRANLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL-- 381 +++ K + ++ KT Y + Q L L+E+R + + Sbjct: 359 DGENLFDSASNHPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDTYAE 418 Query: 382 ---------LPSDDPTYSEDNDPVEESEATH-----------YQLGIACAQIHQNYIISQ 421 L + + ES + LG A AQ+ YI++Q Sbjct: 419 LYKKTDNIDLELSQFEQARFGNMPSESSTNNVSDGIGQASELPPLGFAIAQLLGIYILAQ 478 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDL 480 D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H E L Sbjct: 479 AEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECAALADHAETL 538 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 G++ G N +A+R P +L K ++ L RD++ E+ ++ T+ ILATM Sbjct: 539 AGFGLELSDMGGNTLAVRAAPVMLGKSDVVSLARDVLGELAQVGSSQTIASHENRILATM 598 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 SCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDTLFLR 652 >gi|240123593|ref|ZP_04736549.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID332] gi|268682221|ref|ZP_06149083.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID332] gi|268622505|gb|EEZ54905.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID332] Length = 654 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 214/654 (32%), Positives = 338/654 (51%), Gaps = 65/654 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ V+ + GGG ++ DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ ++ + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNSALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL LE+ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLELPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRANLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL-- 381 +++ K + ++ KT Y + Q L L+E+R + + Sbjct: 359 DSENLFDSASNHPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDTYAE 418 Query: 382 ---------LPSDDPTYSEDNDPVEESEATH-----------YQLGIACAQIHQNYIISQ 421 L + + ES + LG A AQ+ YI++Q Sbjct: 419 LYKKTDDIDLELSQFEQARFGNMPSESSTNNVSDGIGQASELPPLGFAIAQLLGIYILAQ 478 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDL 480 D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H E L Sbjct: 479 AEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECAALADHAETL 538 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 G++ G N +A+R P +L K ++ L RD++ E+ ++ T+ ILATM Sbjct: 539 AGFGLELSDMGGNTLAVRAAPVMLGKSDVVSLARDVLGELAQVGSSQTIASHENRILATM 598 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 SCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDTLFLR 652 >gi|157827812|ref|YP_001496876.1| DNA mismatch repair protein [Rickettsia bellii OSU 85-389] gi|166232103|sp|A8GY89|MUTL_RICB8 RecName: Full=DNA mismatch repair protein mutL gi|157803116|gb|ABV79839.1| DNA mismatch repair protein [Rickettsia bellii OSU 85-389] Length = 611 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 250/610 (40%), Positives = 372/610 (60%), Gaps = 16/610 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE IN+IAAGE+IERP+ +KEL+EN++DA S++++ ++ GK+ I+D+G Sbjct: 1 MTIKLLSESTINRIAAGEVIERPASVVKELVENAVDAGSTKIDIILERAGKNLIIISDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK+ + DF NIHTFGFRGEALPSI A+S + + S+ N Sbjct: 61 VGMTDKELEIAVERHTTSKLDETDFLNIHTFGFRGEALPSIAAISKMLITSKKRDNQKAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G + P N GT +E+RDLFF PARL FL++++ E DV++++A+A+ Sbjct: 121 QIKLIGGDEKQIAPAIHNEGTKIEIRDLFFATPARLKFLRTDKTELAATVDVVKKIALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQS--TNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P++SF+ + K+ Q+ N +RI VIGEDFI NA ++ KS + ++ GYT Sbjct: 181 PEISFSLTHDGKTLLKLKGQNKDAENNLKQRIIDVIGEDFIKNASYIDFKSPDFSIYGYT 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 IPT+NR ++ ++FIN R V+DK + +R AY + + RYP+ + L+IDP+ VDV Sbjct: 241 SIPTYNRASSEDQFLFINNRPVKDKLLQVALRVAYQDYMLRDRYPLCAIFLQIDPQLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL-- 355 NVHPAK+ +RF +P +RN +I SI+ A++ K S+ ++ I F K Sbjct: 301 NVHPAKAEVRFHDPNYVRNLLIDSIKNALSNKSHIASTTIASSAIELFKNPFVNKEPAIS 360 Query: 356 ---------PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 KY + + T K + D LP + E + + Sbjct: 361 KPLNVNSKPSKYRPATSPTVPKYTPNNSCQKLIDTLPHARIEQEVEQRIQNEPQKSSQYR 420 Query: 407 -GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 G A AQ+H Y+ISQT D +VI DQHAAHERL +EK++ + ++ Q LL PEI++L Sbjct: 421 LGAAKAQLHTTYVISQTEDSIVITDQHAAHERLGYEKIKNYIKNEELIKQRLLIPEIVEL 480 Query: 466 L-EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 E ++ E+ + L +LG+ E+FG +I + EIP IL N+ +L++D+ D + + Sbjct: 481 PDEKRADILYENKDKLSKLGLSLEKFGEKSIIVTEIPNILGDINVQKLIQDLADHLAECG 540 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 L + IE++ T AC+ SIR+GRK+ + EMN LLR+ME P S QCNHGRPT+I+LK Sbjct: 541 ENIALTELIEHVTETYACHYSIRAGRKLSADEMNALLRQMENTPFSGQCNHGRPTYIELK 600 Query: 585 LSDIEKLFGR 594 L DIE+LFGR Sbjct: 601 LKDIERLFGR 610 >gi|240128296|ref|ZP_04740957.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-93-1035] gi|268686693|ref|ZP_06153555.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-93-1035] gi|268626977|gb|EEZ59377.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-93-1035] Length = 654 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 212/654 (32%), Positives = 338/654 (51%), Gaps = 65/654 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ V+ + GGG ++ DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKS+ E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSKNTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ ++ + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNSALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRANLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL-- 381 +++ K + ++ KT Y + Q L L+E+R + + Sbjct: 359 DSENLFDSASNHPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDTYAE 418 Query: 382 ---------LPSDDPTYSEDNDPVEESEATH-----------YQLGIACAQIHQNYIISQ 421 L + + ES + LG A AQ+ YI++Q Sbjct: 419 LYKKTDNIDLELSQFEQARFGNMPSESSTNNVSDGIGQASELPPLGFAIAQLLGIYILAQ 478 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDL 480 D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H E L Sbjct: 479 AEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECAALADHAETL 538 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 G++ G N +A+R P +L K ++ L RD++ E+ ++ T+ ILATM Sbjct: 539 AGFGLELSDMGGNTLAVRAAPVMLGKSDVVSLARDVLGELAQVGSSQTIASHENRILATM 598 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 SCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDTLFLR 652 >gi|294669657|ref|ZP_06734724.1| hypothetical protein NEIELOOT_01558 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308570|gb|EFE49813.1| hypothetical protein NEIELOOT_01558 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 638 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 221/638 (34%), Positives = 332/638 (52%), Gaps = 49/638 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ +E + GGG + DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGAAEIEVELDGGGIKRLLVRDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++P+A+ RH TSKI+ D ++ + GFRGE L SI +VS LTL SR P + Sbjct: 63 GIHADDLPLALSRHATSKIASLTDLEHVSSMGFRGEGLASIASVSRLTLTSRTPGSAHAH 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I +S V A GT VEV DLFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 EIRAEDGILSPVAAAAHPEGTTVEVADLFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+ +F+ + +K QS ER + ++G DF ++ + + L G Sbjct: 183 PETAFSLKRDGKSVFKYPPQS----LEERAAAILGSDFQTASLPVEGGGGSMRLYGLIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G Q Y F+N R V+DK +L ++ AY + + P VL LE+ P VDVNV Sbjct: 239 PTFAKGKTGQQYCFVNRRFVRDKVMLHAVKQAYRDVLHQALAPAFVLFLELPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKG----------------------ISTSSVL 337 HP K+ IRFRN + + ++ KA+ S Sbjct: 299 HPTKTEIRFRNSQAVHQLVFHTLDKALAGTRADRTESVGNAGEVLHKMMGLAEERPSENH 358 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLL--------------- 382 A KT Y+ + Q L L E+R + + Sbjct: 359 GGSHAPFSDGLQAGKTAPVSYSAARVPQQRSLSLNESRRAIDTYAELYRRDDELAQLEHE 418 Query: 383 -PSDDPTYSEDNDPVEESEA----THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 + +D +E+ Y LG A AQ+ YI++Q D L++VD HAA ER Sbjct: 419 RFGGAIAQTAVSDGRDEAHGGGGGNAYPLGFAIAQLLGIYILAQAEDSLLLVDMHAAAER 478 Query: 438 LIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 + +EKM++ + SQ+LL P GE A + + ++L R G+ G N IA Sbjct: 479 VNYEKMKRQRGEQGRLNSQSLLIPVTFSAGHGEIAALADFGDELRRFGLDLSPIGENRIA 538 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R +P +L K ++ QL RD++ E + + ++ R ILATM+C+GSIR+GRK+ E Sbjct: 539 VRAVPQMLGKSDVEQLARDMLREFAEVGASQAVEARENRILATMSCHGSIRAGRKLTLPE 598 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MN LLR+ME+ P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 MNALLRDMEQTPRSNQCNHGRPTWVKLTLKELDALFLR 636 >gi|159042919|ref|YP_001531713.1| DNA mismatch repair protein [Dinoroseobacter shibae DFL 12] gi|157910679|gb|ABV92112.1| DNA mismatch repair protein MutL [Dinoroseobacter shibae DFL 12] Length = 621 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 256/601 (42%), Positives = 373/601 (62%), Gaps = 10/601 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E IN+IAAGE+IERP+ A+KEL+EN+LDA++ ++E A GGK+ ++TD+G G Sbjct: 21 IRQLDEAAINRIAAGEVIERPASAVKELVENALDAQARQIEIAYADGGKTLLRVTDDGIG 80 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + ++P+A+ RH TSKI D NIHTFGFRGEALPS+GAV LT+ A++ Sbjct: 81 IAAGDLPLALARHATSKIDGADLLNIHTFGFRGEALPSLGAVGRLTIA-SRAAGAEAAEV 139 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 + G ++ VRP A+N GT+V +RDLF PARL FL+S++ E I +V+RR+A+A P Sbjct: 140 TVEGGRMGPVRPAALNRGTVVTLRDLFSATPARLKFLRSDRAEVQAIGEVVRRLAMAEPS 199 Query: 182 VSFT---FSTIKSNRYKMNFQSTNGNF----PERISQVIGEDFINNAVELNEKSNEITLQ 234 V FT S R G+ R+ +V+G +F NA+ + + + L Sbjct: 200 VGFTLRDVSGGGEGRVTFRVAPEQGDLFDALHRRLGRVLGSEFAENALRIEGEREGLRLS 259 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY +PT++RG A ++F+NGR V+DK ++ +R AYA+ + R+P VL ++ P + Sbjct: 260 GYAALPTYSRGAAVAQFLFVNGRPVRDKLLVGALRGAYADFLSRDRHPAAVLFVDCPPER 319 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHPAKS +RFR P + R I+ +++ A+ + G SS ++ + +F +A + Sbjct: 320 VDVNVHPAKSEVRFREPGVARGLIVTALRHALAEAGHRASSTVADATLGAFRAPDAVGSG 379 Query: 355 LPKYATSLTNTQE-KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 Y + T S +P E EA LG A AQ+ Sbjct: 380 ARIYQMDRPSAAALGRSTAWQAPETAAQGFGFAEAPSARVEPAETVEAIARPLGAARAQL 439 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H+NYI++QT G+V+VDQHAAHERL++E+++ + SQ LL PEI+++ E + + Sbjct: 440 HENYIVAQTETGMVLVDQHAAHERLVYERLKALMAENGVPSQALLIPEIVEMSEADARTL 499 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 ++ E+L LG++ E FGP A+A+RE PA+L LLRDI+DE+ D T LQ RI Sbjct: 500 LDRSEELAALGLRIEPFGPGAVAVRETPALLGPVKAEALLRDILDELSDLGQTDALQARI 559 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E IL+ MAC+GS+RSGR+M EMN LLR+ME P+S QCNHGRPT+++LKL+DIE+LFG Sbjct: 560 EAILSRMACHGSVRSGRRMSGEEMNALLRQMEATPHSGQCNHGRPTYVELKLADIERLFG 619 Query: 594 R 594 R Sbjct: 620 R 620 >gi|87200143|ref|YP_497400.1| DNA mismatch repair protein MutL [Novosphingobium aromaticivorans DSM 12444] gi|87135824|gb|ABD26566.1| DNA mismatch repair protein MutL [Novosphingobium aromaticivorans DSM 12444] Length = 603 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 232/605 (38%), Positives = 358/605 (59%), Gaps = 14/605 (2%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M+ IR+L E +IN+IAAGE++ERP+ A+KEL+EN++DA SS V ++ GG + +++D+ Sbjct: 1 MRVIRRLPETLINRIAAGEVVERPASALKELVENAIDAGSSHVHVRLSEGGLAMIEVSDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G GM +EI +A++RH TSK+ D+ + T GFRGEALPSI +V+ +T+ SRP G Sbjct: 61 GCGMRPDEIALALERHATSKLPDEAIELVETLGFRGEALPSIASVARVTIESRPHGTAEG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + + + P A+ PGT V V LF IPAR FL+S + E +DV+RR+A+A Sbjct: 121 WKRVVDNGALVAEGPAALPPGTRVRVEHLFEKIPARRKFLRSPRSEWAAASDVVRRLAMA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V FT + T R++Q++ + N+VE++ + L G G Sbjct: 181 RPDVGFTLEHDGRRALHVQAGET---LEARVAQLVARELAGNSVEVDLVRGDFHLTGIAG 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTFNRG A+ Y+F+NGR V+D+ ++ +R AYA+ + R+ V+ L L++ +VDVN Sbjct: 238 LPTFNRGVADHQYLFVNGRPVKDRLLIGAVRGAYADMLARDRHAVLALFLQVPASEVDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAKS +RFR+P ++R ++ ++ A++ ++ S ++++ + Sbjct: 298 VHPAKSEVRFRDPALVRGMVVSGLRHALSTGDQRSAQAPSASAMAAWQAEPIAPPPPSSP 357 Query: 359 ATSLTNTQ-EKLFLQENRLSTNDLLP-------SDDPTYSEDNDPVEESEATHYQLGIAC 410 ++ + + + E R+S P+ + +A + LG+A Sbjct: 358 SSDWQGSIFSQQWKPEPRVSEAGQAWRGYEQAIMAPPSARAEPAAQPVVDAAQHPLGVAR 417 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI-TSQTLLTPEIIDLLEGE 469 QI YI+++ DGLVIVDQHAAHERL+ E++R + SQ LL PE+++L E Sbjct: 418 GQISNTYIVAEAEDGLVIVDQHAAHERLVLERLRAAGAGQGVAPSQALLIPEVVELDETA 477 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 C + E E L G+ ERFGPNA+ +R IPA L+K + +L+ D+ D++ L Sbjct: 478 CDRLEEASEKLAEFGLALERFGPNAVLVRAIPAALAKGDPARLVADVADDLAHHGDALLL 537 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 ++++ +LATMAC+GS+R+GR + EMN LLREME P S QCNHGRPT++KL DIE Sbjct: 538 GEKLDLVLATMACHGSVRAGRTLSVAEMNALLREMEVTPRSGQCNHGRPTWVKLAHGDIE 597 Query: 590 KLFGR 594 KLFGR Sbjct: 598 KLFGR 602 >gi|33598139|ref|NP_885782.1| DNA mismatch repair protein [Bordetella parapertussis 12822] gi|81836516|sp|Q7W4N5|MUTL_BORPA RecName: Full=DNA mismatch repair protein mutL gi|33566697|emb|CAE38907.1| DNA mismatch repair protein [Bordetella parapertussis] Length = 629 Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 203/629 (32%), Positives = 337/629 (53%), Gaps = 43/629 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L + +I+QIAAGE+IERP+ +KE++EN++DA + +E + GGG +TD+G Sbjct: 6 PIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGS 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+P+A+ RH TSKI D+ ++ + GFRGEAL SI +V+ LT++SR Sbjct: 66 GIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAW 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ P + PGT ++VR LF +PAR FL+SE E D + R+A+A+ Sbjct: 126 QIDGGSLQV---SPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F + + + +RI V+G +F+++ + + + I L G Sbjct: 183 PEVAFRLFHHDRAQRQWLP----ADHGQRIRDVLGAEFVDHVLPVQAAAGAIALMGMVTR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT R A++ Y+++NGR V+D+ + +R+AYA+ + R P VL L+IDP VDVNV Sbjct: 239 PTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---------------------- 337 HPAK +RFR+ + F+ Q + + + + G + + Sbjct: 299 HPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDAAYAGEPAAAAPG 358 Query: 338 ---SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLL---------PSD 385 + + + + A T +L + + D + Sbjct: 359 LAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAP 418 Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 T A + LG A AQ+H YI++Q + GLV+VD HAAHER+++E++++ Sbjct: 419 AATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKR 478 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 + + Q LL P + E + AL+ EH+ L+ LG + GP +IA+R +PA+L+ Sbjct: 479 ALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLA 538 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 + +I L R ++ ++ + L ++ +L+TMAC+GS+R+ R++ EMN LLR+ME Sbjct: 539 RGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQME 598 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + QCNHGRPT+++ ++D++KLF R Sbjct: 599 ITERADQCNHGRPTWVQWSVNDLDKLFLR 627 >gi|298676065|ref|YP_003727815.1| DNA mismatch repair protein MutL [Methanohalobium evestigatum Z-7303] gi|298289053|gb|ADI75019.1| DNA mismatch repair protein MutL [Methanohalobium evestigatum Z-7303] Length = 626 Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 188/623 (30%), Positives = 308/623 (49%), Gaps = 36/623 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + IN+IAAGE+IERP+ +KELIENS+DA ++ ++ + GG ++DNG Sbjct: 5 RIHILDDSTINKIAAGEVIERPASVVKELIENSIDAGATEIKIDVKEGGAKKITVSDNGT 64 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ +++ +A +H TSKI +D + T GFRGEAL SI +VS + +++R + G Sbjct: 65 GMSYDDVRLAFTKHATSKIWKLEDLYSTTTLGFRGEALSSIASVSKVEMITRQKDDLAGT 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + E I+ V + + GT V V DLF+ PAR +LKS++ E ITD + + A+ Sbjct: 125 MIVVQPEGINDVSEIGASAGTSVNVYDLFYNTPARRKYLKSKRTELAHITDTVSKQALGN 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 VSFT ++ + ++GN + I V G D + + ++ +S I + GY Sbjct: 185 INVSFTLTSNGR---NVLHTPSSGNLFDNIVHVYGRDVARSMIPVDHESELIRVSGYISK 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F R + FIN R+V + I + +RT Y +P GRYP VL ++I+P +VD+NV Sbjct: 242 PEFTRSGTDFQSFFINNRSVSSRAISNALRTGYYTLLPKGRYPAAVLNIQINPEEVDINV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--------------- 344 HP KS++R + I + I +S++ A+ + + S + S Sbjct: 302 HPRKSHVRLSHEQDIMDAISESVKTALGQAELIPSVNKKENDKSQETSVQLNIKEVGNKS 361 Query: 345 -FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 +DN + +Y TS T ++ L N S D + E E+ Sbjct: 362 QVSKDNIIREKPAEYKTSKTGEKKHLKSATNVSSIKDTEKRLKRSERLTTAENENKESQI 421 Query: 404 YQLG------------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 + Q+ + YI+++ LV++DQHAAHER+++E +R NS Sbjct: 422 PKQSSGIQLQSESSNIKVLGQVDELYIVAEMDSRLVLIDQHAAHERIMYEHIR---NSKN 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 Q L++P ++L E L+ E+ L G FGP+ I +P I P Sbjct: 479 PDWQELISPITLELSIKEKVLMEEYIPYLEEFGFAISEFGPSTYIITSVPVIFGNIEKPD 538 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 L D+I EI+ + + + T+AC +I++G + +M L+ +++ N Sbjct: 539 TLHDMISEILSAGRIKNDVGIYDYMCKTIACRSAIKAGHICNTEQMENLIVQLKNTQNPY 598 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT + ++ ++F R Sbjct: 599 TCPHGRPTMLSFTRDELYRMFKR 621 >gi|294084710|ref|YP_003551468.1| DNA mismatch repair enzyme [Candidatus Puniceispirillum marinum IMCC1322] gi|292664283|gb|ADE39384.1| DNA mismatch repair enzyme [Candidatus Puniceispirillum marinum IMCC1322] Length = 613 Score = 533 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 222/609 (36%), Positives = 363/609 (59%), Gaps = 16/609 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L ++++NQIAAGE++ERP+ A+KEL+EN+LDA + ++ + GG +TD+G Sbjct: 4 RIRQLPDRLVNQIAAGEVVERPASALKELVENALDAGAGKISITLKRGGIDEIIVTDDGS 63 Query: 62 GMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM+ ++I +AVQRH TSK+ DD +I GFRGEALPSIGAVS L+L S + + Sbjct: 64 GMSLDDIKLAVQRHATSKLPDDNLVHIKALGFRGEALPSIGAVSRLSLTSIMADMDHAWR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + + P A+ G+++ V LF +PARL FLK+E+ E D+++R+A+A+P Sbjct: 124 LVVDAGHVHDPEPAALKQGSMIAVNQLFKAVPARLKFLKTERTEQGQCVDMVKRLAMAWP 183 Query: 181 KVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V+F S + +++ R+S ++G+ F + A E++ + ITL G G+ Sbjct: 184 TVAFDLSNDGRSLIRLDACLPGAAGLKRRLSAIMGQSFADEAAEMDAVRDRITLTGLVGL 243 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT NR ++F+NGR + D+ +L +R Y +T+P GR+P+ L + + P VDVNV Sbjct: 244 PTMNRPTTGHVFLFVNGRPINDRSLLGAVRAGYGDTLPRGRHPMCALFISLPPEDVDVNV 303 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH----- 354 HPAK+ +RF++ +R ++ I+ + GI +S ++ ++ ++ + Sbjct: 304 HPAKAEVRFKDAAAVRGLLVGGIRARLEDAGIQATSEGGQQALARLSSSSSSSSSSSSFS 363 Query: 355 ------LPKYATSLTNTQEKLFLQENRLST---NDLLPSDDPTYSEDNDPVEESEATHYQ 405 S + + Q ++ P + + + A H Sbjct: 364 GFTAGGSGARGISHVASGPRAHYQPAPPASAHMWQSPVEAPPAARQIDINEADESARHNL 423 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 LG A AQ+H+ YI+++T DG+ I+DQHAAHERL+ E+M+ T + SQ LL PE+I++ Sbjct: 424 LGAAKAQLHKTYIVAETEDGIAIIDQHAAHERLVMERMKAAMAETGVPSQALLLPEVINM 483 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 E C +++ + L ++G+ E FG A+ +R++PA+L N+ QL++DI +E+I+ Sbjct: 484 QEHHCEAVLDAADMLGKMGLTVENFGVGAVVVRDVPAMLGNPNVVQLVQDIAEELIELGD 543 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 + +L+DRI ++LAT++C+GS+R+GR + EMN LLREME P S QCNHGRPT++ L L Sbjct: 544 STSLEDRINHVLATVSCHGSVRAGRILNGDEMNALLREMEVTPRSGQCNHGRPTWVSLSL 603 Query: 586 SDIEKLFGR 594 ++IE LFGR Sbjct: 604 TEIETLFGR 612 >gi|260440446|ref|ZP_05794262.1| DNA mismatch repair protein [Neisseria gonorrhoeae DGI2] gi|291043745|ref|ZP_06569461.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae DGI2] gi|291012208|gb|EFE04197.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae DGI2] Length = 658 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 213/658 (32%), Positives = 337/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ V+ + GGG ++ DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ ++ + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNSALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL LE+ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLELPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRANLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL-- 381 +++ K + ++ KT Y + Q L L+E+R + + Sbjct: 359 DSENLFDSASNHPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDTYAE 418 Query: 382 ---------LPSDDPTYSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 L + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSQFEQARFGNMPSETPAHKTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R P +L K ++ L RD++ E+ ++ T+ I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAAPVMLGKSDVVSLARDVLGELAQVGSSQTIASHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDTLFLR 656 >gi|240014088|ref|ZP_04721001.1| DNA mismatch repair protein [Neisseria gonorrhoeae DGI18] gi|240016522|ref|ZP_04723062.1| DNA mismatch repair protein [Neisseria gonorrhoeae FA6140] gi|240115743|ref|ZP_04729805.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID18] gi|240121649|ref|ZP_04734611.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID24-1] gi|268601421|ref|ZP_06135588.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID18] gi|268585552|gb|EEZ50228.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID18] Length = 654 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 215/654 (32%), Positives = 340/654 (51%), Gaps = 65/654 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ V+ + GGG ++ DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ ++ + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNSALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL LE+ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLELPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK-------------------KGISTSSVLSKK 340 HP K+ IRFR+ + + ++ KA+ G++ + + S+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRANLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 341 MISSFHQDNAP-----------------KTHLPKYATSLTNTQEKLFLQENRLSTNDL-- 381 + + KT Y + Q L L+E+R + + Sbjct: 359 DGENLFDSASNHPTGNKPDIRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDTYAE 418 Query: 382 ---------LPSDDPTYSEDNDPVEESEATH-----------YQLGIACAQIHQNYIISQ 421 L + + ES + LG A AQ+ YI++Q Sbjct: 419 LYKKTDNIDLELSQFEQARFGNMPSESSTNNVSDGIGQASELPPLGFAIAQLLGIYILAQ 478 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDL 480 D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H E L Sbjct: 479 AEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECAALADHAETL 538 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 G++ G N +A+R P +L K ++ L RD++ E+ ++ T+ ILATM Sbjct: 539 AGFGLELSDMGGNTLAVRAAPVMLGKSDVVSLARDVLGELAQVGSSQTIASHENRILATM 598 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 SCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDTLFLR 652 >gi|59801161|ref|YP_207873.1| DNA mismatch repair protein [Neisseria gonorrhoeae FA 1090] gi|240118039|ref|ZP_04732101.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID1] gi|268603752|ref|ZP_06137919.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID1] gi|81311203|sp|Q5F8M6|MUTL_NEIG1 RecName: Full=DNA mismatch repair protein mutL gi|59718056|gb|AAW89461.1| putative DNA mismatch repair protein [Neisseria gonorrhoeae FA 1090] gi|268587883|gb|EEZ52559.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID1] Length = 658 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 213/658 (32%), Positives = 337/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ V+ + GGG ++ DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ ++ + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNSALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL LE+ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLELPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRANLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL-- 381 +++ K + ++ KT Y + Q L L+E+R + + Sbjct: 359 DGENLFDSASNHPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDTYAE 418 Query: 382 ---------LPSDDPTYSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 L + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSQFEQARFGNMPSETPAHKTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R P +L K ++ L RD++ E+ ++ T+ I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAAPVMLGKSDVVSLARDVLGELAQVGSSQTIASHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDTLFLR 656 >gi|33603032|ref|NP_890592.1| DNA mismatch repair protein [Bordetella bronchiseptica RB50] gi|81836878|sp|Q7WG61|MUTL_BORBR RecName: Full=DNA mismatch repair protein mutL gi|33568663|emb|CAE34421.1| DNA mismatch repair protein [Bordetella bronchiseptica RB50] Length = 629 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 203/629 (32%), Positives = 336/629 (53%), Gaps = 43/629 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L + +I+QIAAGE+IERP+ +KE++EN++DA + +E + GGG +TD+G Sbjct: 6 PIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGS 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+P+A+ RH TSKI D+ ++ + GFRGEAL SI +V+ LT++SR Sbjct: 66 GIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAW 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ P + PGT ++VR LF +PAR FL+SE E D + R+A+A+ Sbjct: 126 QIDGGSLQV---SPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F + + + +RI V+G +F+ + + + + I L G Sbjct: 183 PEVAFRLFHHDRAQRQWLP----ADHGQRIRDVLGAEFVGHVLPVQAAAGAIALMGMVTR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT R A++ Y+++NGR V+D+ + +R+AYA+ + R P VL L+IDP VDVNV Sbjct: 239 PTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---------------------- 337 HPAK +RFR+ + F+ Q + + + + G + + Sbjct: 299 HPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDAAYAGEPAAAAPG 358 Query: 338 ---SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLL---------PSD 385 + + + + A T +L + + D + Sbjct: 359 LAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAP 418 Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 T A + LG A AQ+H YI++Q + GLV+VD HAAHER+++E++++ Sbjct: 419 AATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKR 478 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 + + Q LL P + E + AL+ EH+ L+ LG + GP +IA+R +PA+L+ Sbjct: 479 ALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLA 538 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 + +I L R ++ ++ + L ++ +L+TMAC+GS+R+ R++ EMN LLR+ME Sbjct: 539 RGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQME 598 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + QCNHGRPT+++ ++D++KLF R Sbjct: 599 ITERADQCNHGRPTWVQWSVNDLDKLFLR 627 >gi|329120521|ref|ZP_08249185.1| DNA mismatch repair protein MutL [Neisseria bacilliformis ATCC BAA-1200] gi|327461260|gb|EGF07592.1| DNA mismatch repair protein MutL [Neisseria bacilliformis ATCC BAA-1200] Length = 699 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 206/634 (32%), Positives = 327/634 (51%), Gaps = 45/634 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ + I GGG ++TDNG Sbjct: 68 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAISVEIEGGGVKLLRVTDNGA 127 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ RH TSKIS D + + GFRGE L SI +VS LTL SR Sbjct: 128 GIHPDDLALALSRHATSKISGLRDLERVASMGFRGEGLASIASVSRLTLTSRQSGEGHAR 187 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I +S V A GT VEV DLFF PAR FLKS+ E ++ R+A+A+ Sbjct: 188 TIRAEDGSLSPVSAAAAPEGTTVEVADLFFNTPARRKFLKSDNTEAAHCAAMLERLALAF 247 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +F+ + +K+ Q+ R + ++G DF ++ ++ ++ +TL G Sbjct: 248 PATAFSLTREGKPVFKLPPQT----LEARAAAIVGHDFQTASLPVSAQAGGMTLYGLIAK 303 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G + Q Y F+N R V+DK IL ++ AY + + P VL L++ P VD NV Sbjct: 304 PTFAKGKSTQQYCFVNRRCVRDKVILHAVKQAYRDVLHHALVPAFVLFLDLPPEAVDANV 363 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL------------SKKMISSFHQ 347 HPAK+ IRFR+ + + F+ ++ KA+ + + Sbjct: 364 HPAKTEIRFRDSSAVHQFVFHTLDKALADTRADRTESIGNAGALLHQIAGIPDADRPSEN 423 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENR-----------------------LSTNDLLPS 384 P + P T T + + + + L + Sbjct: 424 PQNPFSDAPNAPTGGGKTAPAPYARAPQQRSLGLNESRRALDTYAELYRRSPQEDHELAA 483 Query: 385 DDPTYSEDNDPVEESE---ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 + + + E+ + LG A AQ+ YI++Q D L+++D HAA ER+ +E Sbjct: 484 LEHSRRLPPERPSENPSDNPPEHPLGYAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYE 543 Query: 442 KMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 KM++ ++ + SQ+LL P E A + EH + L G+ G N IA+R + Sbjct: 544 KMKRQRDTQGRLNSQSLLIPVTFAASREETAALAEHADSLRAYGLDLSAVGENRIAVRAV 603 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 P +L +I L RD++ + + + ++ R +LATM+C+GS+R+GR++ EMN L Sbjct: 604 PQMLGTSDIESLARDMLRDFAEHGASQQIEARENRLLATMSCHGSVRAGRRLTLPEMNAL 663 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 664 LRDMEHTPRSNQCNHGRPTWVKLTLKELDALFLR 697 >gi|85373986|ref|YP_458048.1| DNA mismatch repair protein [Erythrobacter litoralis HTCC2594] gi|84787069|gb|ABC63251.1| DNA mismatch repair enzyme [Erythrobacter litoralis HTCC2594] Length = 607 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 220/609 (36%), Positives = 357/609 (58%), Gaps = 18/609 (2%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M IR+L E ++N+IAAGE++ERPS A+KEL+EN++DA ++R+ + GG + ++TD+ Sbjct: 1 MPTIRRLPEALVNRIAAGEVVERPSAALKELVENAVDAGATRIAVHLIDGGLTRIEVTDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKISDDF-------SNIHTFGFRGEALPSIGAVSHLTLMSRP 112 G GM + +A++RH TSK+ DD + T GFRGEALPSIG+VS L SRP Sbjct: 61 GCGMDPAAMELALERHATSKLPDDLIGEAQAIERVATLGFRGEALPSIGSVSRFALESRP 120 Query: 113 PQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 + G + + + P A+ PGT + +F +PAR FL++ + E DVI Sbjct: 121 HGSEQGWRRVVDHGTLVEEGPAALPPGTRARIEQVFAKVPARRKFLRTPRSEYGACLDVI 180 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 RR+A+A P + FT + + + P+R++Q++ + +NAV L+ + + +T Sbjct: 181 RRLAMARPDIGFTLDHGERRVFALQ---PGEELPDRVAQIVAPELKDNAVLLDMQRDTMT 237 Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 L G G+PT+NRG A+ Y+F+NGR V+D+ ++ +R AY++ + R+ V+ L L++ Sbjct: 238 LTGIAGLPTYNRGVADHQYLFVNGRPVKDRLLVGAVRGAYSDMLARDRHAVLALFLDLPS 297 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK 352 VDVNVHPAK+ +RFR+ +R FI+ +++A++ ++ + + + Q+ + Sbjct: 298 EDVDVNVHPAKTEVRFRDAQAVRGFIVSGLRQALSTGDRRSAQGPDRTAMKRWQQEPVRE 357 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE------ATHYQL 406 P + R +++ + + E+E H+ L Sbjct: 358 EPSPALRSIFEGRGWSKPGTGVREPSHEWHSHEGEVIASPQGRAVEAEDIAADAKQHFPL 417 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT-SQTLLTPEIIDL 465 G+A Q+ YI+++ DGLV+VDQHAAHERL+ E+++ ++ SQ LL PE+++L Sbjct: 418 GVARGQVANTYIVAEAADGLVLVDQHAAHERLVLERLKAAGAGEAVSRSQALLMPEVVEL 477 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 E C + E L +G+ ERFGP A+ +R +P L+ N +LL+DI D++ Sbjct: 478 DEPSCDRLESAAEKLDAMGLSIERFGPGAMLVRSLPHALAGSNPGKLLQDIADDLAKHGD 537 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 L+++++ +L TMAC+GS+R+GR ++ EMN LLREME+ P S QCNHGRPT++KL + Sbjct: 538 ALWLEEKLDLVLGTMACHGSVRAGRTLRVDEMNALLREMERTPRSGQCNHGRPTWVKLSM 597 Query: 586 SDIEKLFGR 594 D+EKLFGR Sbjct: 598 EDVEKLFGR 606 >gi|257094379|ref|YP_003168020.1| DNA mismatch repair protein MutL [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046903|gb|ACV36091.1| DNA mismatch repair protein MutL [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 615 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 199/612 (32%), Positives = 332/612 (54%), Gaps = 23/612 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + +I+QIAAGE+++RP+ +KEL+EN+LDA SS ++ + GG +++D+G Sbjct: 6 RIALLPDLLISQIAAGEVVDRPASVLKELLENALDAGSSTIQIQLEEGGVKLLRVSDDGG 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG- 118 GM +E+ +A+ RH TSKI+ D + T GFRGEAL S+ AV+ LTL SR ++ Sbjct: 66 GMARDELALALTRHATSKINSLADLERVGTLGFRGEALASVAAVARLTLTSRQASSDRAA 125 Query: 119 --AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 ++ E + +P A+ GT+VE+RDL++ PAR FLKSE E + ++R+A Sbjct: 126 GQHAWRLTDEPGAGPQPAALQAGTVVEMRDLYYNTPARRKFLKSEGSEFAHCAEAVKRIA 185 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 +A+P V+FT S ++ + R+ ++G++F+ + L+ + + + GY Sbjct: 186 LAHPGVAFTLSHNGRVALHLSA----SDSRVRVGAILGDEFLAESRCLDVSAGPLRVAGY 241 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 +P ++R + Y ++NGR V+DK + +R AY + + RYP L L+IDP VD Sbjct: 242 CALPAYSRARGDAQYCYVNGRFVRDKLLGHALRQAYQDLLHGSRYPAYCLFLDIDPAGVD 301 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK-----GISTSSVLSKKMISSFHQDNAP 351 VNVHP K+ +RFR+ + F+ ++Q+ + S+S V + S + P Sbjct: 302 VNVHPQKTEVRFRDARAVHQFVFHAVQRLLASPLATLGTASSSEVPTPNTQVSPWPEQRP 361 Query: 352 KTHLPKYATSL-----TNTQEKLFLQENRLSTNDLLPSDDPTYSEDND----PVEESEAT 402 A + T Q L + E + L D E + Sbjct: 362 AAPAMHAAEPVAFGRRTPFQGSLHVGEPARAGTYLSFVDATQSPEPAPEELSNAAGDDGR 421 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 LG A AQ+ YI++Q T GL++VD HAAHER+++E+++Q + ++ +Q LL P + Sbjct: 422 APPLGYALAQLQGVYILAQNTHGLIVVDMHAAHERILYERLKQALDGERVATQPLLIPAV 481 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 + A EH L RLG GP +A+R +PA+L + L+R ++ E+ + Sbjct: 482 FMADALDVAAAEEHSVALQRLGFDVAAMGPRQLAVRSVPALLLGGDPAALVRSLLGELRE 541 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 + + +LA+MAC+G++R+ R + EMN LLR+ME+ S CNHGRPT+++ Sbjct: 542 HGISQLMTTHRNELLASMACHGAVRARRLLSLSEMNALLRQMEETERSDHCNHGRPTWMQ 601 Query: 583 LKLSDIEKLFGR 594 ++++++ F R Sbjct: 602 FSMAELDRYFQR 613 >gi|170698332|ref|ZP_02889407.1| DNA mismatch repair protein MutL [Burkholderia ambifaria IOP40-10] gi|170136751|gb|EDT05004.1| DNA mismatch repair protein MutL [Burkholderia ambifaria IOP40-10] Length = 661 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 199/644 (30%), Positives = 330/644 (51%), Gaps = 59/644 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA ++ + V+ GG ITD+G G Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGATTLRIVLEEGGVKRISITDDGCG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+P+A+ RH TSKI ++ + T GFRGEAL SI +V+ +++ SR + Sbjct: 83 IPPGELPLALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMSITSRTADVAHATK 142 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ P A GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 143 I---DATTGALSPAAGAVGTTIEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRAALARP 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N +R+++++G+ F + L+E++ + + G G+P Sbjct: 200 DVAISVLHNGKAVEHWNATEP----AQRVAKILGDGFATAHLPLDEQAGPLAVYGCAGLP 255 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 256 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 315 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---SKKMISSFHQDNAPKTHLP- 356 P+K +RFR+ I ++ ++Q+A+ + ++ +S A + P Sbjct: 316 PSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAQLSPAPGGPASFLNTPL 375 Query: 357 -------------KYATSLTNTQEKLFLQENRLS-------------------------- 377 +S +++ ++++ R++ Sbjct: 376 GLGAATGTGGSGFSSPSSSSSSAGNTWMRQARMTQGTLPVAQPLALYDALFGRKDTGAGT 435 Query: 378 -------TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 +D + P+ + LG A QIH Y+++Q GLVIVD Sbjct: 436 PDGTTVIAHDSASVTNTPPGFVASPLAATAHDEQPLGFALGQIHGIYVLAQNAHGLVIVD 495 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 HAAHER+++E+ + I Q+LL P + E + E + L LG Sbjct: 496 MHAAHERILYEQFKNALADRTIAVQSLLLPISMTATPVEIGTVEEERDTLESLGFDLAVL 555 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 P +AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ ++R+ R Sbjct: 556 SPTTLAIRAVPALLKDADLQSLARAVLADLHAFGGSRVLTERQHELLGTLACHHAVRANR 615 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ EMN LLR+ME + QCNHGRPT+ +L L+D+++LF R Sbjct: 616 RLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLNDLDRLFMR 659 >gi|182677997|ref|YP_001832143.1| DNA mismatch repair protein MutL [Beijerinckia indica subsp. indica ATCC 9039] gi|238691233|sp|B2II71|MUTL_BEII9 RecName: Full=DNA mismatch repair protein mutL gi|182633880|gb|ACB94654.1| DNA mismatch repair protein MutL [Beijerinckia indica subsp. indica ATCC 9039] Length = 637 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 233/636 (36%), Positives = 368/636 (57%), Gaps = 42/636 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L +I++IAAGE+IERP+ A+KEL+EN+LDA++S ++ V+ GGGK+ ++TDNG Sbjct: 1 MTIRRLDPVLIDRIAAGEVIERPAAAVKELVENALDAQASEIDVVLEGGGKTLIRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM++E++ ++V+RH TSK+ D D I T GFRGEALPSIG+VS L+L SR G Sbjct: 61 CGMSAEDLELSVERHATSKLPDGDLFAIATLGFRGEALPSIGSVSVLSLTSRMETATHGV 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ + +V P GT +EVR+LF T PARL FLK ++ E D ++R+A+A+ Sbjct: 121 ALSVEHGRKQTVIPCGQPRGTRIEVRELFRTTPARLKFLKGDRAEARAAADAVQRLAMAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQS-TNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P FTF++ + + + RI V+G+DF NA+ + + I L+G+ G Sbjct: 181 PTRRFTFTSTDTAGFDYLPCAEGPEGLLARIGAVLGKDFEANALPVEAEREGIILEGFIG 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PT++R N Y+F+NGR V+DK + +R AY + +P GRYP + L L DP++VDVN Sbjct: 241 LPTWHRANGLAQYLFVNGRPVRDKLLTGAVRAAYMDYLPAGRYPALALFLRCDPQEVDVN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK+ +RFR+ ++R ++ ++++ + + + + + +A + P Sbjct: 301 VHPAKAEVRFRDQGLVRGLLVGALKQTLQQAMHRATPDGGRVALGLLAMHSAGQGQRPVS 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN------------------------- 393 + S+ + + R + + D S Sbjct: 361 SASMPSASRQAPTMPPRDWIKEGVQDWDWRQSPARPQNPPQNPPPGDRIEMSGSLPLGFA 420 Query: 394 --------------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 LG A AQ+H+ YI++QT DG V+VDQHAAHERL+ Sbjct: 421 ETPAGLNGDSGKELSEAASETPHDEPLGFARAQLHETYIVAQTRDGFVLVDQHAAHERLV 480 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E+++Q + + Q LL P I++L E + +++ L G+ E FGP A+A+RE Sbjct: 481 YERLKQARAAQTVERQILLLPTIVELPEADVERLVDAASMLADFGLVVESFGPGALAVRE 540 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMN 558 IP +L ++P L+ D+ +++ + L+ +++++LAT AC+ S+R+GR++ EMN Sbjct: 541 IPIVLKDGSVPALIHDLANQLQEDDKALIPLERKLDHVLATFACHHSVRAGRRLGIEEMN 600 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LLREME+ P S QCNHGRPT+I+LKL DIE+LFGR Sbjct: 601 ALLREMERTPGSGQCNHGRPTYIELKLGDIERLFGR 636 >gi|33591485|ref|NP_879129.1| DNA mismatch repair protein [Bordetella pertussis Tohama I] gi|81836381|sp|Q7W0A6|MUTL_BORPE RecName: Full=DNA mismatch repair protein mutL gi|33571127|emb|CAE40624.1| DNA mismatch repair protein [Bordetella pertussis Tohama I] gi|332380926|gb|AEE65773.1| DNA mismatch repair protein [Bordetella pertussis CS] Length = 629 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 203/629 (32%), Positives = 336/629 (53%), Gaps = 43/629 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L + +I+QIAAGE+IERP+ +KE++EN++DA + +E + GGG +TD+G Sbjct: 6 PIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGS 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+P+A+ RH TSKI D+ ++ + GFRGEAL SI +V+ LT++SR Sbjct: 66 GIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAW 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ P + PGT ++VR LF +PAR FL+SE E D + R+A+A+ Sbjct: 126 QIDGGSLQV---SPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F + + + +RI V+G +F+ + + + + I L G Sbjct: 183 PEVAFRLFHHDRAQRQWLP----ADHGQRIRDVLGAEFVGHVLPVLAAAGAIALMGMVTR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT R A++ Y+++NGR V+D+ + +R+AYA+ + R P VL L+IDP VDVNV Sbjct: 239 PTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---------------------- 337 HPAK +RFR+ + F+ Q + + + + G + + Sbjct: 299 HPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDTAYAGEPAAAAPG 358 Query: 338 ---SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLL---------PSD 385 + + + + A T +L + + D + Sbjct: 359 LAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAP 418 Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 T A + LG A AQ+H YI++Q + GLV+VD HAAHER+++E++++ Sbjct: 419 AATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKR 478 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 + + Q LL P + E + AL+ EH+ L+ LG + GP +IA+R +PA+L+ Sbjct: 479 ALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLA 538 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 + +I L R ++ ++ + L ++ +L+TMAC+GS+R+ R++ EMN LLR+ME Sbjct: 539 RGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQME 598 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + QCNHGRPT+++ ++D++KLF R Sbjct: 599 ITERADQCNHGRPTWVQWSVNDLDKLFLR 627 >gi|307545956|ref|YP_003898435.1| DNA mismatch repair protein [Halomonas elongata DSM 2581] gi|307217980|emb|CBV43250.1| DNA mismatch repair protein [Halomonas elongata DSM 2581] Length = 661 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 210/653 (32%), Positives = 343/653 (52%), Gaps = 61/653 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L ++ NQIAAGE++ERPS +KEL+EN++DA S R+E + GG ++ D+G G Sbjct: 7 IQVLDPRLANQIAAGEVVERPSSVVKELVENAIDAGSRRIEVELESGGARLIRVRDDGVG 66 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN-TGA 119 + E++P+A+ RH TSKI+ DD + + GFRGEAL SI +VS L LMS + +G Sbjct: 67 IGEEDLPLALSRHATSKIASLDDLEGVASLGFRGEALASISSVSRLELMSNVDDDPTSGW 126 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ + G ++ P GT V VRDLFF PAR FL++E+ E + + RR A++ Sbjct: 127 RVVVEGRRMEPRVTPSPHPRGTSVTVRDLFFNTPARRKFLRTEKTEFGHVEEAFRRQALS 186 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + + + ++++ R+ ++G+ F+ NA+ L+ ++ + L G+ G Sbjct: 187 RLDLGWVLRHNQKTIHQLSPGGDLVGHERRLQALLGKAFLENALHLDIETGGLRLWGWVG 246 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PT +R A+Q Y F+NGR V+D+ + IR AY + + GR+PV VL LE+DP VDVN Sbjct: 247 LPTHSRAQADQQYFFVNGRVVRDRLVAHAIRQAYRDVLFHGRHPVFVLYLEVDPTVVDVN 306 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI--NKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VHP K +RFR+ ++ +F+ S+ +A+ + G ++++ + A Sbjct: 307 VHPTKHEVRFRDGRMVHDFLFSSLHRALGEARAGQPGEGRVTEESPAGESASQASAPAAS 366 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN----------------------- 393 + A S Q++ R ++ + D + Sbjct: 367 EVAESAGRWQQQPMALHGRDESDGQKVTPDRVRAFMEGYRALHPEHEESLLTPQPSAPGA 426 Query: 394 ---------------------------DPVEESEATHYQLGIACAQIHQNYIISQTTDGL 426 EE LG A AQ+H YI+SQT GL Sbjct: 427 GGNAAEVALAEREASPAAATSSPAPAPAMPEEDATKAPPLGYAVAQLHGIYILSQTERGL 486 Query: 427 VIVDQHAAHERLIFEKMRQDF-----NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 V+VD HAAHER+++E+M+ N + +Q LL P + E A E Sbjct: 487 VVVDMHAAHERIVYERMKAQVHGEAGNGGGLQAQPLLVPVSLAASAAEVATAEAEREAFS 546 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 RLG++ + GP + +R++PA+L ++ L+RD++ ++ + L+ I +L+TMA Sbjct: 547 RLGVELDVAGPETLLVRQVPALLVDADVEPLVRDMLGDLERYGRSDRLEAHINELLSTMA 606 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C+GS+R+ R++ + EMN LLR+ME+ S QCNHGRPT+ ++ L ++++LF R Sbjct: 607 CHGSVRANRQLTTAEMNALLRDMERTERSGQCNHGRPTWTEMSLKELDRLFLR 659 >gi|240125775|ref|ZP_04738661.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-92-679] gi|268684372|ref|ZP_06151234.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-92-679] gi|268624656|gb|EEZ57056.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-92-679] Length = 658 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 214/658 (32%), Positives = 339/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ V+ + GGG ++ DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ ++ + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNSALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL LE+ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLELPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK-------------------KGISTSSVLSKK 340 HP K+ IRFR+ + + ++ KA+ G++ + + S+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRANLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 341 MISSFHQDNAP-----------------KTHLPKYATSLTNTQEKLFLQENRLSTNDL-- 381 + + KT Y + Q L L+E+R + + Sbjct: 359 DGENLFDSASNHPTGNKPDIRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDTYAE 418 Query: 382 ---------LPSDDPTYSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 L + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSQFEQARFGNMPSETPAHKTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R P +L K ++ L RD++ E+ ++ T+ I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAAPVMLGKSDVVSLARDVLGELAQVGSSQTIASHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDTLFLR 656 >gi|91773654|ref|YP_566346.1| DNA mismatch repair protein MutL [Methanococcoides burtonii DSM 6242] gi|91712669|gb|ABE52596.1| DNA mismatch repair protein MutL [Methanococcoides burtonii DSM 6242] Length = 603 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 197/600 (32%), Positives = 314/600 (52%), Gaps = 13/600 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L E IN+IAAGE+IERP+ +KEL++N++DA ++ + + G +TDNG Sbjct: 8 KIRVLDEATINKIAAGEVIERPASVVKELVDNAIDAGATEIRVEVVAAGTELITVTDNGS 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ +A +H TSKI+ +D + T GFRGEAL SI AV+ + L +R + G Sbjct: 68 GMPREDAILAFTKHGTSKIAQIEDLEEVLTLGFRGEALSSIAAVARVYLTTRQKKEIAGT 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ISG + +V V PGT + V LF+ PAR +LKS + E ITD++ R A + Sbjct: 128 KVVISGGLVENVVEVGAAPGTSISVESLFYNTPARKKYLKSLRTELAHITDIVTRHAFGH 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SFT + + T+GN + I ++G D V + +S+ + + GY Sbjct: 188 PDISFTLISDGK---VLVRSPTSGNVLDSIIYLLGVDIAKKIVPVEFRSDIVNISGYISK 244 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R +Q + FINGR V I + +R Y IP GRYPV VL LE+D R+VDVNV Sbjct: 245 PEVTRSGTDQQFFFINGRGVSSTSISNAVRLGYYNLIPKGRYPVAVLDLELDLREVDVNV 304 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST--SSVLSKKMISSFHQDNAPKTHLPK 357 HPAK Y+R + + + +I +++ A+ + S ++ + + F +++ T + Sbjct: 305 HPAKRYVRLSHEREVSDAVILAVENALKGDDLVPKVSLPENRPVQAVFSEESKTGTEVIS 364 Query: 358 Y---ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 + S+ +E + + + +T Q++ Sbjct: 365 SEGVSVSVPVAKEADEPYHASARDTEKRLKRSERILSKTEKNPDRVSTGLDKARIVGQVN 424 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 + YII + G++IVDQHAAHER+++E++R +S Q L+TP ++DL E L+ Sbjct: 425 ELYIIVEFEGGIMIVDQHAAHERVMYEQIRDGNSSG---WQELITPVMLDLTSKEKVLLD 481 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 E+ L +G FGPN+ + IP++L K +L+ DII +++ S + Sbjct: 482 EYIPLLEEMGFAISEFGPNSFVVTSIPSLLGKLENTELIHDIIMDVLSSGKVKRDTGMFD 541 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ TMAC +I++G +M LLR+++ N C HGRPT I +++KLF R Sbjct: 542 SLCKTMACRAAIKAGAGCSMDQMENLLRQLDMAENPYTCPHGRPTVISFTKGELDKLFKR 601 >gi|289207679|ref|YP_003459745.1| DNA mismatch repair protein MutL [Thioalkalivibrio sp. K90mix] gi|288943310|gb|ADC71009.1| DNA mismatch repair protein MutL [Thioalkalivibrio sp. K90mix] Length = 626 Score = 531 bits (1369), Expect = e-148, Method: Composition-based stats. Identities = 222/627 (35%), Positives = 347/627 (55%), Gaps = 36/627 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I KLSE++INQIAAGE++ERP+ +KEL+EN+LDA S+R+E + GG QI+DNG Sbjct: 1 MSIEKLSEQLINQIAAGEVVERPASVVKELVENALDAGSTRIEVRLEQGGIRLIQISDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+P+A+ RH TSKI +D +HT GFRGEALPSI +VS L++ S G Sbjct: 61 CGIHRDELPLALSRHATSKIRSMEDLEALHTLGFRGEALPSIASVSRLSMTSAVEGERNG 120 Query: 119 AQIAISGEKISSVR-PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 ++ G + P A GT VEVRDLFF +PAR F+++E+ E N VIR A Sbjct: 121 WRLTGDGSDVFREAAPAAHPVGTTVEVRDLFFNVPARRKFVRTERTEFNHCETVIRTQAA 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A P+V+FT + + + +R+ ++GE F+ A + E+ + L G+ Sbjct: 181 ACPEVAFTLRHNDRVVLDLPAAA---DPAQRVRALLGEAFMGAATPVGEQRAGLKLSGWL 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G PT +R +Q + F+NGR ++D+ + + +R AY + + GR+P+ VL LE+DP QVDV Sbjct: 238 GAPTQSRAQPDQQFFFVNGRAIRDRVLAAAVRKAYQDVLYHGRHPMFVLELELDPVQVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK-------------GISTSSVLSKKMISS 344 N HP K +RFR ++ +FI ++ KA+ ++ ++ I + Sbjct: 298 NAHPTKQEVRFRESRMVHDFIFHALHKALADVRPGDGGMPGYLPADTGSAPAPQERAIPA 357 Query: 345 FHQDNA-PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT- 402 F ++ A P+Y + + S + V E Sbjct: 358 FPRERALSGLGAPEYRAEARSPAAGSGDRREYASGTSSDYAAAWAEFRGPAAVAEPAPRS 417 Query: 403 ---------------HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 LG A Q+ + +I+++ GL++VD HAAHER+ +E++++++ Sbjct: 418 FEAAGGASESDDAEGMPPLGFALGQVAETFILAENASGLIVVDMHAAHERITYERLKREW 477 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 S ITSQ LL PE +D+ E AL EH L LG + +R GP +A+R PA+L + Sbjct: 478 GSQGITSQPLLVPETLDVTPAEAALAEEHAGVLGALGFELDRAGPETLALRAAPALLRGR 537 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 + QL+RD++ ++ ++ + + +L TMAC+GS+R+GR++ EMN+LLR+ME Sbjct: 538 DTAQLVRDVLADLAAVGYSHRAEGEMNAVLGTMACHGSVRAGRRLTLPEMNQLLRDMEAT 597 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+++L +++LF R Sbjct: 598 ERSGQCNHGRPTWVELDHHALDRLFLR 624 >gi|304321473|ref|YP_003855116.1| DNA mismatch repair protein [Parvularcula bermudensis HTCC2503] gi|303300375|gb|ADM09974.1| DNA mismatch repair protein [Parvularcula bermudensis HTCC2503] Length = 632 Score = 531 bits (1369), Expect = e-148, Method: Composition-based stats. Identities = 235/612 (38%), Positives = 363/612 (59%), Gaps = 22/612 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L +N+IAAGE+IERP+ A+KEL+EN++DA + + I GGK+ + D+G Sbjct: 23 RIRRLPAVAVNRIAAGEVIERPAAAVKELVENAIDAGARTITVRIDQGGKALIDVEDDGC 82 Query: 62 GMTSEEIPMAVQRHCTSKISDD------FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN 115 GM +E++ +A++RH TSK++ D +I T GFRGEALPSIGAV+ L + SR Sbjct: 83 GMGAEDLILALERHATSKLAADETGCVDLLDIATLGFRGEALPSIGAVAELDIASRCHGG 142 Query: 116 NTGAQIAISGEKISSVRPVAMN-PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRR 174 + G +I+ I RP GT V V+ LFF PARL FLK++ ET +++ ++ Sbjct: 143 D-GIKISCRAGVIDPPRPHPFVGVGTKVSVKRLFFATPARLKFLKADSAETRAVSETLKA 201 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 +A+A P++ FT R+ + R+ ++G++F +NA+ ++ L Sbjct: 202 LAMAQPEIGFTLIADGRQRFSYPPEGEGPEGALRRLGHIMGKEFEDNALAIDIDREGARL 261 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G+ G+PT NRG ++ Y+F+NGR V+D+ ++ +R AYA+ + R+P++ L +++ + Sbjct: 262 HGFAGVPTLNRGQPDRQYLFVNGRPVKDRLMVGAVRGAYADFLARDRHPLLALYIDLPFQ 321 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 QVDVNVHPAK+ +RFR+ IR I+ ++ + G S+ ++ +S F AP Sbjct: 322 QVDVNVHPAKTEVRFRDAAAIRGMIVSGLRHMLAAAGHRASTTIAASALSRFEGAEAPPP 381 Query: 354 HLPKYATS-----------LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 P T+ L Q F E PS ED E E Sbjct: 382 QGPNAPTTFVHGAHRERPILPPRQAPPFAAEGTTLFRGEAPSAQTI--EDPSQAHEEEGP 439 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + LG+ AQ+H+ Y+++QTTDG+VIVDQHAAHERLI+E M+ I QTLL PE+ Sbjct: 440 SFPLGVPRAQLHETYVLAQTTDGIVIVDQHAAHERLIYEAMKSRQRDRGIERQTLLIPEV 499 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 +DL + E L+++ E+L LG+ E FG A+ +RE+P + ++ L+RDI +++ Sbjct: 500 VDLPQEEAELLIDRTEELAALGLVVEAFGGTAVLVREVPCLFGDGDVAGLIRDIAADLVT 559 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 + L+ R+ +I MAC G+I+SGR++ + EMNRLLR+ME P+S QCNHGRPT+++ Sbjct: 560 LDGSAALETRLGDIAGNMACRGAIKSGRRLTAEEMNRLLRDMEAVPHSGQCNHGRPTYVE 619 Query: 583 LKLSDIEKLFGR 594 LKL+DIE+LFGR Sbjct: 620 LKLADIERLFGR 631 >gi|114319732|ref|YP_741415.1| DNA mismatch repair protein MutL [Alkalilimnicola ehrlichii MLHE-1] gi|114226126|gb|ABI55925.1| DNA mismatch repair protein MutL [Alkalilimnicola ehrlichii MLHE-1] Length = 636 Score = 531 bits (1369), Expect = e-148, Method: Composition-based stats. Identities = 202/631 (32%), Positives = 338/631 (53%), Gaps = 38/631 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I++L +++NQIAAGE++ERP+ +KEL+ENSLDA + + + GGK ++ D+G Sbjct: 4 PIQQLPLQLVNQIAAGEVVERPASVLKELVENSLDAGARSLAVELEQGGKRLIRVRDDGN 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A++RH TSKI+ + + + GFRGEALPSIGAVS L L+SRPP Sbjct: 64 GIPREQLGLALRRHATSKITSLSELEQVVSLGFRGEALPSIGAVSRLRLISRPPGAEHAW 123 Query: 120 QIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + + P A PGT VEVRDLFF P R FL++++ E + + +RR+A+ Sbjct: 124 AVRTDGDSEPAGPEPAAHPPGTTVEVRDLFFNTPGRRKFLRTDRTEFSHAQEALRRLALG 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F + R+ +++GE F+ + L + + L G+ Sbjct: 184 RFDVAFRLQHNGRTVLDLPPAGDRAGAERRLGELLGEGFLGECIHLECAAAGLKLSGWLA 243 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R + Y ++NGR ++D+ +R AYA+ + R+P +L L++DP +VDVN Sbjct: 244 LPTFSRSQGDLQYFYVNGRMIRDRMAGHALRRAYADVLYRDRFPAYLLYLDLDPDRVDVN 303 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP-- 356 VHP K +RFR+ ++ +F+ + +++A+ + +T+S + S + Sbjct: 304 VHPTKHEVRFRDSRLVYDFLFRQVREALARVSPATASGVQPPQGSVASAEGPRSLAAAAG 363 Query: 357 -----------------------------KYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + A L + K +++ + D P Sbjct: 364 ERWGGAAPAAGAAPTARRSPHQHGLGLPLEEARLLYGERSKAHAAGPAVASPSGVVRDAP 423 Query: 388 TYSEDNDPV----EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + +E LG A AQ+H YI++Q GLV+VD HAAHER+++E+M Sbjct: 424 AGEAVACETGGAGDPTERGGPPLGHALAQVHGVYILAQNDQGLVLVDMHAAHERVVYERM 483 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + + + I SQ LL PE + + E + E +LG + +R P+ + +R +PA+ Sbjct: 484 KAQLSGSGIASQALLMPEGLSVTPAEGEEVERAGERFRQLGFQVDRVAPDRVLVRAVPAL 543 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 L+ L+RD++ ++ S + +++ + ++LATMAC+GS+R+ R++ EM+ LLRE Sbjct: 544 LANAEPVALVRDVLADLRTQSRSRQVEEALNHVLATMACHGSVRANRRLTLPEMDALLRE 603 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ME PNS QCNHGRPT+ L + +++LF R Sbjct: 604 MEATPNSGQCNHGRPTWTVLDMDALDRLFMR 634 >gi|194098697|ref|YP_002001759.1| DNA mismatch repair protein [Neisseria gonorrhoeae NCCP11945] gi|239999002|ref|ZP_04718926.1| DNA mismatch repair protein [Neisseria gonorrhoeae 35/02] gi|240080646|ref|ZP_04725189.1| DNA mismatch repair protein [Neisseria gonorrhoeae FA19] gi|240112989|ref|ZP_04727479.1| DNA mismatch repair protein [Neisseria gonorrhoeae MS11] gi|254493793|ref|ZP_05106964.1| DNA mismatch repair protein [Neisseria gonorrhoeae 1291] gi|268594850|ref|ZP_06129017.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae 35/02] gi|268596770|ref|ZP_06130937.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae FA19] gi|268599068|ref|ZP_06133235.1| DNA mismatch repair protein [Neisseria gonorrhoeae MS11] gi|238690209|sp|B4RLX4|MUTL_NEIG2 RecName: Full=DNA mismatch repair protein mutL gi|193933987|gb|ACF29811.1| DNA mismatch repair protein [Neisseria gonorrhoeae NCCP11945] gi|226512833|gb|EEH62178.1| DNA mismatch repair protein [Neisseria gonorrhoeae 1291] gi|268548239|gb|EEZ43657.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae 35/02] gi|268550558|gb|EEZ45577.1| DNA mismatch repair protein mutL [Neisseria gonorrhoeae FA19] gi|268583199|gb|EEZ47875.1| DNA mismatch repair protein [Neisseria gonorrhoeae MS11] gi|317164295|gb|ADV07836.1| DNA mismatch repair protein [Neisseria gonorrhoeae TCDC-NG08107] Length = 658 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 213/658 (32%), Positives = 338/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ V+ + GGG ++ DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVDVELEGGGIRLIRVGDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ ++ + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNSALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL LE+ P+ VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLELPPKAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRANLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL-- 381 +++ K + ++ KT Y + Q L L+E+R + + Sbjct: 359 DSENLFDSASNHPTGNKPDTRNAFGSSGKTAPMPYQAARAPQQHSLSLRESRAAMDTYAE 418 Query: 382 ---------LPSDDPTYSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 L + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSQFEQARFGNMPSETPAHKTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L G++ G N +A+R P +L K ++ L RD++ E+ ++ T+ I Sbjct: 539 AETLAGFGLELSDMGGNTLAVRAAPVMLGKSDVVSLARDVLGELAQVGSSQTIASHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDTLFLR 656 >gi|85708576|ref|ZP_01039642.1| DNA mismatch repair enzyme [Erythrobacter sp. NAP1] gi|85690110|gb|EAQ30113.1| DNA mismatch repair enzyme [Erythrobacter sp. NAP1] Length = 610 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 227/610 (37%), Positives = 364/610 (59%), Gaps = 17/610 (2%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M IR+L ++N+IAAGE++ERP+ A+KEL+EN++DA + R+ V+ GG + ++TD+ Sbjct: 1 MPQIRRLPTALVNRIAAGEVVERPAAALKELVENAIDAGARRIGVVLTDGGLTRLEVTDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G GMT +E+ +A++RH TSK+ D+ + T GFRGEALPSI +V+ LTL SRP G Sbjct: 61 GCGMTPDEMGLALERHATSKLPDEAIEMVATLGFRGEALPSIASVARLTLESRPKGAADG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + + P A+ GT V V +F +PAR FL++ + E D++RR+A+A Sbjct: 121 WRRVVDHGETVEDAPAALPVGTRVRVEQIFAKVPARRKFLRTPRSEYIACLDIVRRLAMA 180 Query: 179 YPKVSFTFST--IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK----SNEIT 232 P ++FT R + Q+ G R++Q++ + +NAVE+ + + Sbjct: 181 RPDIAFTLENGAEGKIRKALATQTDEG-LSNRVAQIVARELKDNAVEIELERDGPHGPMR 239 Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 L G G+PT+NRG A+ Y+F+NGR V+DK + +R AY++ + R+ V+ L L++ P Sbjct: 240 LSGLAGLPTYNRGVADHQYLFVNGRPVKDKLLTGAVRGAYSDMLARDRHAVLALFLDVPP 299 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD--NA 350 VDVNVHPAK+ +RFR+ T +R FI+ +++A+ ++ + + + + + Sbjct: 300 EDVDVNVHPAKTEVRFRDSTGVRGFIVSGLRQALATGDRRSAQGPDRAAMERWQAEPVHE 359 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC 410 P + S + + + E R+ + P + E+E Y LGIA Sbjct: 360 PAPAMRSIFESRDWSAPQQRVAEPRVEYTPRPDAALPQGRAEEAAPIENEVAEYPLGIAR 419 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT-SQTLLTPEIIDLLEGE 469 Q+ YI++++ D L++VDQHAAHERL+ E++++ SQ LL P+++++ E + Sbjct: 420 GQVANTYIVAESKDALILVDQHAAHERLVLERLKRAGAGEATQRSQALLVPDVVEMDEAD 479 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII-----DSS 524 C + + E L R G+ ERFGP A+ +R +P+ ++K + +LLRD+ D+I + S Sbjct: 480 CDRLEDAAEGLARFGLTVERFGPAAMLVRSVPSAIAKADTGKLLRDLADDIAKHGKQEDS 539 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 + L +R+E +LATMAC+GS+R+GR + EMN LLREME P S QCNHGRPT++KL Sbjct: 540 GSLLLAERLEYVLATMACHGSVRAGRVLSVAEMNALLREMEATPRSGQCNHGRPTWVKLS 599 Query: 585 LSDIEKLFGR 594 + D+EKLFGR Sbjct: 600 MEDVEKLFGR 609 >gi|171321502|ref|ZP_02910443.1| DNA mismatch repair protein MutL [Burkholderia ambifaria MEX-5] gi|171093210|gb|EDT38417.1| DNA mismatch repair protein MutL [Burkholderia ambifaria MEX-5] Length = 662 Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats. Identities = 199/645 (30%), Positives = 330/645 (51%), Gaps = 60/645 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA ++ + V+ GG ITD+G G Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGATTLRIVLEEGGVKRISITDDGCG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+P+A+ RH TSKI ++ + T GFRGEAL SI +V+ +++ SR + Sbjct: 83 IPPGELPLALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMSITSRTADVAHATK 142 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ P A GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 143 I---DATTGALSPAAGAVGTTIEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRAALARP 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N +R+++++G+ F + L+E++ + + G G+P Sbjct: 200 DVAISVLHNGKAVEHWNATEP----AQRVAKILGDGFATAHLPLDEQAGPLAVYGCAGLP 255 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 256 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 315 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---SKKMISSFHQDNAPKTHLP- 356 P+K +RFR+ I ++ ++Q+A+ + ++ +S A + P Sbjct: 316 PSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAQLSPAPGGPASFLNTPL 375 Query: 357 -------------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE------------ 391 +S +++ ++++ R++ L + + Sbjct: 376 GLGAATGTGGSGFSSPSSSSSSAGNTWMRQARMTQGTLPVAQPLALYDALFGRKDTGAGT 435 Query: 392 ----------------------DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 P+ + LG A QIH Y+++Q GLVIV Sbjct: 436 PDGTTIVARDAAEAPNAPLSGFVASPLTATAHDEQPLGFALGQIHGIYVLAQNAHGLVIV 495 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 D HAAHER+++E+ + I Q+LL P + E + E + L LG Sbjct: 496 DMHAAHERILYEQFKNALADRTIAVQSLLLPISMTATPVEIGTVEEERDTLESLGFDLAV 555 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 P +AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ ++R+ Sbjct: 556 LSPTTLAIRAVPALLKDADLQSLARAVLADLHAFGGSRVLTERQHELLGTLACHHAVRAN 615 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R++ EMN LLR+ME + QCNHGRPT+ +L L+D+++LF R Sbjct: 616 RRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLNDLDRLFMR 660 >gi|221200993|ref|ZP_03574033.1| DNA mismatch repair protein MutL [Burkholderia multivorans CGD2M] gi|221206555|ref|ZP_03579568.1| DNA mismatch repair protein MutL [Burkholderia multivorans CGD2] gi|221214412|ref|ZP_03587383.1| DNA mismatch repair protein MutL [Burkholderia multivorans CGD1] gi|221165669|gb|EED98144.1| DNA mismatch repair protein MutL [Burkholderia multivorans CGD1] gi|221173864|gb|EEE06298.1| DNA mismatch repair protein MutL [Burkholderia multivorans CGD2] gi|221178843|gb|EEE11250.1| DNA mismatch repair protein MutL [Burkholderia multivorans CGD2M] Length = 661 Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats. Identities = 199/646 (30%), Positives = 327/646 (50%), Gaps = 63/646 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA ++ + V+ GG ITD+G G Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGATTLRIVLEEGGVKRISITDDGCG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+P+A+ RH TSKI ++ + T GFRGEAL SI +V+ + + SR + Sbjct: 83 IPPGELPLALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMFITSRTADAAHATR 142 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 143 I---DAQTGVLSPAAGAVGTTIEVRELYFNTPARRKFLKSEQTEFGHCVEMIRRAALARP 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N +R+++++G+ F + L+E++ + + G G+P Sbjct: 200 DVAISVLHNGKAVEHWNATEP----AQRVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 255 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 256 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 315 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P+K +RFR+ I F+ ++Q+A+ + ++ + + H + AP+ +T Sbjct: 316 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGH--AAHLEPAPRGPASFLST 373 Query: 361 SLTNTQEKL-------------------FLQENRLSTNDLLPSD---------------- 385 L +Q + +L++ R++ L + Sbjct: 374 PLGQSQNQPASTAGSGFSSPSSSAPGSTWLRQARMTQGTLPVAQPLALYDALFGRKDTGA 433 Query: 386 -------------DPTYSEDNDPVEESEATHYQLGIACAQ----IHQNYIISQTTDGLVI 428 D + A IH Y+++Q GLVI Sbjct: 434 GTPDATTTARDAADDPAAPLPGFAAMPSAASMHDEQPLGFALGQIHGIYVLAQNAHGLVI 493 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 VD HAAHER+++E+ + + Q+LL P + E + E + L LG Sbjct: 494 VDMHAAHERILYEQFKNALADRAVAVQSLLLPVSMTATPVEIGTVEEERDTLEALGFDLA 553 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 P ++AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ ++R+ Sbjct: 554 VLSPTSLAIRAVPALLKDADLQALARAVLADLHAFGGSRVLTERQHELLGTLACHHAVRA 613 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R++ EMN LLR+ME + QCNHGRPT+ +L L D+++LF R Sbjct: 614 NRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLGDLDRLFMR 659 >gi|325130516|gb|EGC53271.1| DNA mismatch repair protein MutL [Neisseria meningitidis OX99.30304] Length = 658 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 214/658 (32%), Positives = 341/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSRQVHQLVFHTLNKALADTRADLTESVGNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 ++ K + + KT Y ++ Q L L+E+R + N Sbjct: 359 DSENLFNRASDYPTGNKPDTRNAFGASGKTAPMPYQSAYAPQQRSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSRFEQARFGNMPSETPAPQTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPVTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 + L G++ G N +A+R +PA+L K +I L RD++ E+ ++ T+++ I Sbjct: 539 ADALAGFGLELSDMGGNTLAVRAVPAMLGKSDIVSLARDVLGELAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|222056190|ref|YP_002538552.1| DNA mismatch repair protein MutL [Geobacter sp. FRC-32] gi|254766168|sp|B9M3N0|MUTL_GEOSF RecName: Full=DNA mismatch repair protein mutL gi|221565479|gb|ACM21451.1| DNA mismatch repair protein MutL [Geobacter sp. FRC-32] Length = 598 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 201/599 (33%), Positives = 325/599 (54%), Gaps = 10/599 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E++ N+IAAGE++ERP+ +KEL+EN+LDA S V I GGK +++D G Sbjct: 4 RIKILPEQLTNKIAAGEVVERPASVVKELVENALDAGCSEVMVEIEAGGKRLIRVSDTGC 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ +A++RH TSKI+ +D ++ T GFRGEALPS+ +VS TL +R + G Sbjct: 64 GMTREDALLALERHATSKIANDEDLFSLATLGFRGEALPSVASVSRFTLATREKGSLEGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I G +I V+ M GT++ VR+LFF PARL F+KS + E + D++ R+AI+ Sbjct: 124 EIYAEGGRIKEVKACGMAEGTVISVRNLFFNTPARLKFMKSSETEAGHVGDLLTRLAISR 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + F ++ ++ + N + ER++ ++G + L+ ++ + G G Sbjct: 184 PDIRFIYTNDGKTVFR----ALNADLRERVATLLGRTLSQDLYPLDFCDGQLNVTGLVGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R A+ Y +INGR ++DK + + AY + GRYPVVVL + + +VDVNV Sbjct: 240 PECSRSAASHVYTYINGRFIRDKVVQHAVLQAYRNFMERGRYPVVVLFISVPAAEVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP----KTHL 355 HP K +RFR + + I ++++ + + + +K +S A + L Sbjct: 300 HPTKHEVRFREQGRVHDAIQEAVESVLRSSPWVKTQPVVQKTQASTSIAAARIAQVRESL 359 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 +Y T Q ++ DP D P E E ++ Q + Sbjct: 360 TQYRPQKTTQQSFKMSTPAVPASFRETSLPDPVPVADAAPAPEVERGYFSGLSVIGQFNA 419 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 YI+ Q + LVI+DQHAAHER+ FE+++ + + SQ LL PE ++ E A+I E Sbjct: 420 AYILCQDGNSLVIIDQHAAHERVAFERLKTQHAAMGVESQRLLFPETVEFSFKEGAVIRE 479 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 H +L R+G E FG + + +P +LS + + LRDI++E+ + + QD +E+ Sbjct: 480 HQTELDRVGFSLEEFGGSTWLLNAVPHLLSGNDYVKTLRDILEELQSLGRSRSFQDILED 539 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ILA +AC+ +R + E+ L ++M+ SS C HGRP L L++IE++F R Sbjct: 540 ILARIACHSVVRGSHCLSQQEIKALFQQMDTTEFSSNCPHGRPVLHTLTLAEIERMFKR 598 >gi|67459779|ref|YP_247403.1| DNA mismatch repair protein [Rickettsia felis URRWXCal2] gi|75535831|sp|Q4UJQ1|MUTL_RICFE RecName: Full=DNA mismatch repair protein mutL gi|67005312|gb|AAY62238.1| DNA mismatch repair protein MutL [Rickettsia felis URRWXCal2] Length = 609 Score = 530 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 249/609 (40%), Positives = 375/609 (61%), Gaps = 15/609 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE IN+IAAGE+IERP+ +KEL+EN++DA S++++ ++ GK+ I+D+G Sbjct: 1 MTIKFLSESTINRIAAGEVIERPASVVKELVENAVDAGSTKIDIILERAGKNLIIISDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK+ + DF NIHTFGFRGEALPSI A+S + + S+ + Sbjct: 61 IGMTDKELEIAVERHTTSKLDESDFLNIHTFGFRGEALPSIAAISKMLITSKKQGADKAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G V N GT +E+RDLFF PARL FL++++ E DV++++A+A+ Sbjct: 121 QIKLIGGNEKQVTVSVHNEGTKIEIRDLFFATPARLKFLRADKTELAATVDVVKKIALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P++SF+ + N K Q+ + N +RI VIG+DFI NA ++ K+ + ++ GYT Sbjct: 181 PEISFSLTHDDRNLLKFKGQNKDAETNLKQRIIDVIGDDFIKNAAYIDFKTPDFSICGYT 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 IPT+NR ++ ++FIN R V+DK + +R AY + + RYP+ + L+IDP+ VDV Sbjct: 241 SIPTYNRASSEDQFLFINNRPVKDKLLQVALRVAYQDYLARDRYPLCAIFLQIDPQLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK+ +RF +P +RN +I++I+ A+ K TS+ ++ + F K Sbjct: 301 NVHPAKAEVRFHDPNYVRNLLIEAIKNALTNKSHVTSTTIASDALQLFKNPLVNKQPSVS 360 Query: 358 YATSLTNTQE--KLFLQENRLSTNDLLPS-------DDPTYSEDNDPVEESEATHYQL-- 406 A S+ + + + + T + E +E + H Q Sbjct: 361 KAVSVNSKPADYRPAMSPSFKPTPNTACQKLIDTLPHAKIEQEVERRIEHEQQVHKQYKL 420 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 G A AQ+H YIISQT D +VI DQHAAHERL +EK++ + ++ Q LL PEI++L Sbjct: 421 GAAKAQLHTTYIISQTEDSIVITDQHAAHERLGYEKIKDYLKTEELIKQRLLIPEIVELP 480 Query: 467 -EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 E + + E+ E L++LG+ E+FG +I + EIP IL N+ +L++D+ D + D Sbjct: 481 NERKADCLYENREKLYKLGLTLEKFGEKSIIVTEIPNILEDVNVQKLIQDLADHLSDFGE 540 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 L + IE++ T AC+ SIR+GRK+ + EMN LLR+ME P S QCNHGRPT+I+LKL Sbjct: 541 NIALTELIEHVTETYACHYSIRAGRKLSADEMNALLRQMENTPFSGQCNHGRPTYIELKL 600 Query: 586 SDIEKLFGR 594 DIE+LFGR Sbjct: 601 KDIERLFGR 609 >gi|77918908|ref|YP_356723.1| DNA mismatch repair protein [Pelobacter carbinolicus DSM 2380] gi|123729468|sp|Q3A504|MUTL_PELCD RecName: Full=DNA mismatch repair protein mutL gi|77544991|gb|ABA88553.1| DNA mismatch repair protein MutL [Pelobacter carbinolicus DSM 2380] Length = 628 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 199/627 (31%), Positives = 330/627 (52%), Gaps = 37/627 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L E + NQIAAGE++ERP+ +KEL+EN+LDA +SR++ + GGK ++TDNG Sbjct: 4 KIHILPESLCNQIAAGEVVERPASVVKELVENALDAGASRIQVDVENGGKRLIRVTDNGC 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E+ + ++RH TSK+ D + T GFRGEALPSI AVS TL +R ++ G Sbjct: 64 GMSREDAFLCLERHATSKVRAEQDLFRLTTLGFRGEALPSIAAVSRFTLRTRLAEDVEGW 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G + + PGTI+E+R+LFF PAR FL+ ++ E I + + R+A++ Sbjct: 124 ELVVEGGTVKRSSAAGVPPGTIIEIRNLFFNTPARRKFLRRDETELGHIGETLTRLALSC 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE-ITLQGYTG 238 P+V F F +++N + ER ++++G + + + + + + E + L G Sbjct: 184 PEVCFRFMHNGRMLWEVN---RQKSLVERAAELLGREAVRDMLPVERQGPEGMRLHGLIS 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P NR + FINGR ++DK + + Y + GR+PV+VL LEIDP QVDVN Sbjct: 241 SPRLNRSGLGGMFTFINGRFIRDKVVQHALADGYRNLLAKGRHPVLVLFLEIDPSQVDVN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K +RFR ++ +FI+++++ + + S + ++NA + Sbjct: 301 VHPTKHEVRFRQQALVHDFIVKALRDHLQQVPTSAMPAPGNSPFTVPARENAASVKPDET 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP----------------------- 395 +L +T E ++ PS + Sbjct: 361 KPALADTPAAFSAGEGSSRSDVPYPSASQVTETTDSYDAHDSGVEGASTAPPLSEEGLFS 420 Query: 396 --------VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 + + + Q +Y++ Q+ L+++DQHAAHER+ FE +R+ + Sbjct: 421 VTADVRPSEQTENSGFFASLRLIGQYQNSYLVCQSEKDLILIDQHAAHERIGFEHLRKQY 480 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + I Q LL P +++ ++ E + L RLG E FG NA A++E+P +L + Sbjct: 481 LAGSIERQLLLFPLVLEFDFRLGRIVEEQRDSLFRLGFALENFGGNAFALKELPRMLKEA 540 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 + +L+RD++DE + ++ +E IL MAC+ +R+ +++ EM LL E++K Sbjct: 541 DAERLVRDVVDEFAAIGRSQAVEIELERILLKMACHAMVRAHQRLSFDEMQALLDELDKT 600 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 P SS C HGRPTF++ L ++E+LF R Sbjct: 601 PFSSNCPHGRPTFLRWSLGELERLFKR 627 >gi|329904231|ref|ZP_08273710.1| DNA mismatch repair protein MutL [Oxalobacteraceae bacterium IMCC9480] gi|327548094|gb|EGF32819.1| DNA mismatch repair protein MutL [Oxalobacteraceae bacterium IMCC9480] Length = 612 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 203/608 (33%), Positives = 330/608 (54%), Gaps = 22/608 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L +++I+QIAAGE++ERPS +KEL+EN+LDA ++++ + GG ITDNG Sbjct: 10 SIAALPDQLISQIAAGEVVERPSAVVKELLENALDAGATQITIRLEQGGIKRIAITDNGR 69 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++EIP+A+ RH TSKI+ D N+ T GFRGEAL SI +++ LTL +R Sbjct: 70 GIPADEIPLALARHATSKIASLSDLENVATLGFRGEALASIASIAQLTLTTRTATAAHAW 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ S + P + PGT ++V+DL++ PAR FLKS+Q E +V+RR+A++ Sbjct: 130 EMSGSQ---PAPVPSSGAPGTTIDVQDLYYNTPARRKFLKSDQTEYGHCAEVVRRIALSR 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F+ + T + R + ++G DF + L+E + + L GY G+ Sbjct: 187 PDVAFSLTHNGKTVDHW----TLADMDRRSAHILGSDFSAARLSLDEAAGPLRLHGYAGL 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RG A+ Y ++NGR V+DK + +R+AY + + RYP VL L++DP VDVNV Sbjct: 243 PTASRGRADAQYFYVNGRFVRDKLLTHAVRSAYQDVLHGDRYPSYVLALDLDPALVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS---SFHQDNAPKTHLP 356 HP+K +RFR+ + F+ ++ +A+++ + ++ + +H Sbjct: 303 HPSKIEVRFRDSRAVHQFVFHAVTRALSQTSATADGMVPAPQAAGAMPWHSTQQTPAQPY 362 Query: 357 KYATSLTNTQEKLFLQ----------ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 S + E Q E +N+ + + V S + L Sbjct: 363 TRQGSFSQQAEPGIAQNSARYGALFGEKSGDSNEAFEQVAVAGWQPSPAVAPSGTAEFPL 422 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 G A AQ+ YI++Q GLV+VD HAAHER+++E+ + ++ + Q LL P Sbjct: 423 GFALAQLQGIYILAQNLTGLVLVDMHAAHERILYEQFKTALDTDAVVVQPLLIPVTFHAD 482 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 E E+ L LG P +A+R IPA+L + L RD++ ++ + + Sbjct: 483 AVEVGTTAENQATLAALGFDIAALSPTTLAVRAIPALLKNADAQSLARDVLRDVREFGGS 542 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 L +R +L T+AC+ ++R+ R + EMN LLR+ME + QCNHGRPT++++ LS Sbjct: 543 RVLMERRNELLGTLACHTAVRANRILTLPEMNALLRQMEATERADQCNHGRPTWVQMALS 602 Query: 587 DIEKLFGR 594 D+++LF R Sbjct: 603 DLDRLFQR 610 >gi|260574506|ref|ZP_05842510.1| DNA mismatch repair protein MutL [Rhodobacter sp. SW2] gi|259023402|gb|EEW26694.1| DNA mismatch repair protein MutL [Rhodobacter sp. SW2] Length = 605 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 248/599 (41%), Positives = 384/599 (64%), Gaps = 19/599 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E IN+IAAGE++ERP+ A+KEL+EN+LDA + R+ +A GGK+ +++D+G G Sbjct: 18 IRQLDEAAINRIAAGEVVERPASAVKELVENALDAGALRIGIDVADGGKTLIRVSDDGCG 77 Query: 63 MTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT+ ++P+A+ RH TSKI D NIH+FGFRGEALPS+GAV LTL SR Sbjct: 78 MTAADLPLALSRHATSKIDGSDLLNIHSFGFRGEALPSLGAVGRLTLTSRAAGAEAATLS 137 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 G ++++VRP A+ GT+VE+RDLFF PARL F+++++ E I DV++R+A+A P+ Sbjct: 138 V-EGGRMAAVRPAALTRGTVVELRDLFFATPARLKFMRTDRAEMQAIADVVKRLALAQPQ 196 Query: 182 VSFTFS--TIKSNRYKMNFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQG 235 V FT + R G+F + R+++V+G DF NA+ ++ + + L G Sbjct: 197 VGFTLRDVSGGEGRLLFRADPEPGDFFDALHGRVARVLGADFAENALRIDVAHDGLRLLG 256 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y +PT++RG++ ++F+N R V D+ + +R Y + + R+P VL L+ DP+QV Sbjct: 257 YAALPTYSRGSSVAQFLFVNSRPVLDRQLFGALRAGYMDVLSRDRHPAAVLNLQCDPQQV 316 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHPAK+ +RFR P ++R ++ +++A+ G S+ ++ + +++F + P+ + Sbjct: 317 DVNVHPAKAEVRFREPALVRGLVVSGLRQALAAAGHRASTTVAGETLTAFRPE--PRIYQ 374 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 + T Q L Q + + + S+ LG A AQ+H+ Sbjct: 375 MDRPSQPTLAQ-ALHWQAPGFAEA--------PQARFEEQAPASDEPPRPLGAAKAQLHE 425 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 NYII+QT G+VIVDQHAAHERL++++++ +S+ I +Q LL PEI+ L + + +++ Sbjct: 426 NYIIAQTASGMVIVDQHAAHERLVYQRLKAQRDSSGIAAQALLIPEIVSLSPADASRLLD 485 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 DL LG+ E FG NA+A+RE PAIL + + LLRDI+D++ D + +Q R++ Sbjct: 486 AAADLAALGLVIEPFGGNAVAVRETPAILGRVDAQALLRDILDDLADLGDSTRVQARMDA 545 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +L+ MAC+GS+RSGR+M++ EMN LLREME P S QCNHGRPT+++LKL+DIE+LFGR Sbjct: 546 VLSRMACHGSVRSGRQMRAEEMNALLREMEATPLSGQCNHGRPTYVELKLADIERLFGR 604 >gi|158424017|ref|YP_001525309.1| DNA mismatch repair protein [Azorhizobium caulinodans ORS 571] gi|172047960|sp|A8I6D2|MUTL_AZOC5 RecName: Full=DNA mismatch repair protein mutL gi|158330906|dbj|BAF88391.1| DNA mismatch repair protein [Azorhizobium caulinodans ORS 571] Length = 625 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 238/624 (38%), Positives = 381/624 (61%), Gaps = 30/624 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L +I++IAAGE++ERP+ A+KEL+EN++DA ++ +E ++ GGG+ +I+DNG Sbjct: 1 MTIRRLPPVLIDRIAAGEVVERPAAAVKELVENAIDAGATEIEVLVVGGGREMIRISDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI-SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+++E+ +AV+RH TSK+ ++D I T GFRGEALPSIGAV+ L++ SRP Sbjct: 61 SGMSADELSLAVERHATSKLPTEDLLAISTLGFRGEALPSIGAVARLSIASRPKSAPHAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G ++ RP A+N GT VEVRDLFF PARL FLKS++ E DV+RR+A+A Sbjct: 121 EIRVEGGVVTPPRPAALNGGTRVEVRDLFFATPARLKFLKSDRAEAAAAADVVRRLALAR 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTN-GNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V+FT T +S + R++ V+G + N + + + + L G G Sbjct: 181 PDVAFTLMTDDRQPLTWVARSMDEAGRAARVADVLGAEAGRNLIPVVGERGGVRLVGLAG 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PT+++ N+ ++F+NGR V+DK ++ +R AY++ +P RYPV+ L L +DPR+VDVN Sbjct: 241 LPTYSKANSLSQFLFVNGRPVRDKLLMGALRAAYSDLLPSDRYPVLALFLSLDPREVDVN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI----SSFHQDNAPKTH 354 VHPAK+ +RFR+ +R +++++ A+ + ST+ ++ +++ + + P Sbjct: 301 VHPAKTEVRFRDGGNVRALLVRTLTDALAARVPSTAGTIADRLVELARTPELEPARPAAA 360 Query: 355 LPKYATSLTNT--------QEKLFLQENRLSTNDLLPSDDPTYSE--------------- 391 +P++ + N + L ++ +++E Sbjct: 361 IPEFRPYRAEPMPAGGYDWRASPARPLNVAEPDGALEAEMESFAEAVQASFDVGMPAADA 420 Query: 392 -DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 + V E+ LG A AQ+H+ YI++QT +G+V+VDQHAAHERL++EK++ Sbjct: 421 RADAAVPETGDLDRPLGAARAQLHETYIVAQTREGMVLVDQHAAHERLVYEKLKAALERD 480 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 + Q LL P ++DL E + E DL LG+ E FG A+ +RE+PA+L+K ++ Sbjct: 481 GVARQGLLVPAVVDLDPAEADRLAERAGDLAALGLVIEPFGIGAVLVREVPALLAKADVT 540 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 +L+RD+ + + L+ R+ ++ ATMAC+GS+R+GR+++ EMN LLREME+ PN+ Sbjct: 541 KLVRDVAEHSAEWDDALPLERRLLHVAATMACHGSVRAGRRLRVEEMNALLREMEETPNA 600 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 +CNHGRPTFI L L D+EKLF R Sbjct: 601 GECNHGRPTFITLSLKDVEKLFAR 624 >gi|319898390|ref|YP_004158483.1| DNA mismatch repair protein MutL [Bartonella clarridgeiae 73] gi|319402354|emb|CBI75893.1| DNA mismatch repair protein MutL [Bartonella clarridgeiae 73] Length = 612 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 266/611 (43%), Positives = 390/611 (63%), Gaps = 17/611 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LSE IINQIAAGE+IERP+ +KELIEN++DA ++R+E VIA GGK+ +++DNG Sbjct: 1 MIIRHLSETIINQIAAGEVIERPTNVVKELIENAIDAGANRIEIVIANGGKNLIKVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ +++ +A+ RHCTSKI+DD NI GFRGEALPSIG+VS L L SR +++ A+ Sbjct: 61 CGIPEDQLTLAISRHCTSKITDDVHNICFLGFRGEALPSIGSVSKLKLTSRTQNSDSAAE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ KI +P A NPGTIVEVRDLFF PARL F+KS++ ET+ I D I+R+AIA+P Sbjct: 121 IIVTAGKIEGPKPSAANPGTIVEVRDLFFVTPARLKFMKSDRAETSSIIDTIKRIAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F+ + I + N +RI+Q++G++F +N++ L+ K + L G+ G+ Sbjct: 181 HIRFSLAGIDRASMEFPAMEQNTQGQLQRITQIMGKEFASNSLILDAKRESVHLTGFAGL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNR N+ + ++NGR V+DK + IR AYA+ I R+ + +L + + P VDVNV Sbjct: 241 PSFNRSNSLHQFAYVNGRPVRDKLLWGAIRGAYADVIARDRHAIAILFINLPPTDVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD------NAPKT 353 HPAK +RFR+P++IR II +I++A+++ G+ +S S+ M+++F + Sbjct: 301 HPAKMDVRFRDPSLIRGLIIGAIREALHQTGVRPTSTGSEAMLAAFRTQSLETVKTHQTS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND----------PVEESEATH 403 L +F + ++++ L D E V SE H Sbjct: 361 SYGARPCHLEPELTSIFHKPLNINSSIDLQEDTIPIMECLSRPSGDTRATINVSTSEELH 420 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 Y LG A AQIH+NYI+SQT + L+IVDQHAAHERL++E ++ S + SQ LL PEI+ Sbjct: 421 YPLGAARAQIHKNYIVSQTQNSLIIVDQHAAHERLVYEALKNALYSKPLPSQLLLIPEIV 480 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 +L E + ++ H + L + G+ E FG AIA+ E P++L + NI L++D+ DE + Sbjct: 481 ELSEEDATCLLSHKDALKKFGLGIESFGIGAIAVHETPSMLGEINIQALIKDLADEAAEY 540 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 T L+ ++ + ATMAC+ SI SGR + EMN LLR++E PNS CNHGRPT+I+L Sbjct: 541 DTIDNLKGMLDYVAATMACHSSICSGRLLHPEEMNALLRQIEATPNSGTCNHGRPTYIEL 600 Query: 584 KLSDIEKLFGR 594 KL+DIE+LFGR Sbjct: 601 KLADIERLFGR 611 >gi|298290347|ref|YP_003692286.1| DNA mismatch repair protein MutL [Starkeya novella DSM 506] gi|296926858|gb|ADH87667.1| DNA mismatch repair protein MutL [Starkeya novella DSM 506] Length = 611 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 236/610 (38%), Positives = 369/610 (60%), Gaps = 16/610 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R L ++++IAAGE++ERP+ A+KE++EN+LDA ++R+E VI GGG+ ++TD+G Sbjct: 1 MPLRLLPSTLVDRIAAGEVVERPAAALKEIVENALDAGATRIEVVIDGGGRRLMRVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI-SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+++E+ +AV+RH TSK+ ++D +I T GFRGEALPSIGAV+ L++ SRP ++T Sbjct: 61 CGMSADELALAVERHATSKLDTEDLLSIATLGFRGEALPSIGAVARLSITSRPRGSDTAH 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G S+V+P A+ GT VEVRDLFF PARL FLKSE+ ET D ++R+A+A Sbjct: 121 EIRVEGGAKSAVKPAALGFGTRVEVRDLFFATPARLKFLKSERAETAAAVDAVKRLALAR 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V F T +S + RI+ V+G + NA++++ L G G Sbjct: 181 PDVGFILVTDDRPPVTWPARSADAAGRRARIADVLGHEVGANALDIDGLREGARLSGLAG 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PT+ + N+ Y+F+NGR V+DK ++ IR AYA+ +P R+PV L L++DP +VDVN Sbjct: 241 LPTYAKANSLSQYLFVNGRPVRDKVLIGAIRAAYADLLPSDRHPVTALFLDLDPHEVDVN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK+ +RFR+ +R I++++ A+ T+S ++K+ + P Sbjct: 301 VHPAKTEVRFRDAGNVRALIVRTLTDALALGVPRTASTAAEKLAQFARPEFRQGAGNPPR 360 Query: 359 ATS--LTNTQEKLFLQENRLSTNDLLPSDD------------PTYSEDNDPVEESEATHY 404 + T + + S + N + Sbjct: 361 PGNYDWTRSWAAPDVAPREASPAGFREEAAGFDFGLGLALAPSADARANAAPPAPDLMER 420 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 LG A AQ+H+ YII+QT DG+V++DQHAAHER+++EK++ + Q LL P +++ Sbjct: 421 PLGAARAQLHETYIIAQTKDGVVVIDQHAAHERIVYEKLKAAMERDGLARQMLLVPLVVE 480 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L + A + E L +LG+ E FGP A+ +RE+P++L ++ L+ ++ + + Sbjct: 481 LDPSDAARLAERAAALEKLGLVLEPFGPGAVLVREVPSLLGDADVCALVTELAEHAAEWD 540 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 L+ R+ +I ATMAC+GS+R+GR+++ EMN LLREME+ PN++QCNHGRPTF+ L Sbjct: 541 DALPLERRLLHIAATMACHGSVRAGRRLRVEEMNALLREMEETPNAAQCNHGRPTFVTLA 600 Query: 585 LSDIEKLFGR 594 L+DIE+LF R Sbjct: 601 LADIERLFAR 610 >gi|157965005|ref|YP_001499829.1| DNA mismatch repair protein [Rickettsia massiliae MTU5] gi|157844781|gb|ABV85282.1| DNA mismatch repair protein MutL [Rickettsia massiliae MTU5] Length = 615 Score = 528 bits (1360), Expect = e-147, Method: Composition-based stats. Identities = 248/611 (40%), Positives = 369/611 (60%), Gaps = 17/611 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE INQIAAGE+IERP+ +KEL+EN++DA S++++ ++ GK+ I+D+G Sbjct: 5 MTIKFLSESTINQIAAGEVIERPASVVKELVENAVDASSTKIDIILERAGKNLIIISDDG 64 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK + DF NIHTFGFRGEALPSI A+S + + S+ + Sbjct: 65 IGMTDKELEIAVERHTTSKFDESDFLNIHTFGFRGEALPSIAAISKMLITSKKRDADKAF 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G V N GT +E+RDLFF PARL FL++++ E DV++++A+A+ Sbjct: 125 QIKLIGGNEKQVTISVHNEGTKIEIRDLFFATPARLKFLRADKTELAATVDVVKKIALAH 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P+ SF+ + N K+ Q+ + N +RI VIG+DFI NA ++ K+ ++ GYT Sbjct: 185 PETSFSLTHDGKNLLKLKGQNKDAKTNLKQRIIDVIGDDFIKNAAYIDFKTPNFSICGYT 244 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 PT+NR ++ ++FIN R V+DK + +R AY + + RYP+ + L+IDP+ VDV Sbjct: 245 SSPTYNRASSEDQFLFINNRPVKDKLLQVALRVAYQDYLARDRYPLCAIFLQIDPQLVDV 304 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK+ +RF +P +RN +I++I+ A+ K TSS ++ P Sbjct: 305 NVHPAKAEVRFHDPNYVRNLLIEAIKNALTNKSHVTSSTTIASDALELFKNPLVNKQSPV 364 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPT-----------YSEDNDPVEESEATHYQL 406 N++ + + N + + E + +E + T Q Sbjct: 365 SKVIKVNSKSADYRPTTHSTLNTVPQNHVCQKLIDTLSHAKIEQEVENRIEHEQQTRKQY 424 Query: 407 --GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 G A AQ H YIISQT D +VI DQHAAHERL +EK++ + ++ Q LL PEI++ Sbjct: 425 KLGAAKAQFHTTYIISQTEDSIVITDQHAAHERLGYEKIKDYLKTEELIKQRLLIPEIVE 484 Query: 465 LL-EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 L E + + +H E L++LG+ E+FG +I + EIP IL N+ +L++D+ D + D Sbjct: 485 LPNEKKADCLYDHREKLYKLGLTLEKFGEKSIIVTEIPNILGDVNVQKLIQDLADHLSDF 544 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 L + IE++ T AC+ SIR+GRK+ + EMN LLR+ME P S QCNHGRPT+I+L Sbjct: 545 GKNIALTELIEHVTKTYACHYSIRAGRKLSADEMNALLRQMENTPLSGQCNHGRPTYIEL 604 Query: 584 KLSDIEKLFGR 594 KL DIE+LFGR Sbjct: 605 KLKDIERLFGR 615 >gi|88810490|ref|ZP_01125747.1| DNA mismatch repair protein [Nitrococcus mobilis Nb-231] gi|88792120|gb|EAR23230.1| DNA mismatch repair protein [Nitrococcus mobilis Nb-231] Length = 632 Score = 528 bits (1360), Expect = e-147, Method: Composition-based stats. Identities = 209/617 (33%), Positives = 350/617 (56%), Gaps = 24/617 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++++L +++NQIAAGE+IERP+ +KEL+EN+LDA++ R+E V+ GGGK ++ D+G Sbjct: 14 RVQRLPPQLVNQIAAGEVIERPAAVVKELVENALDADAGRIEIVVEGGGKRLIRVRDDGV 73 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E++ AV RH TSKI D D I + GFRGEALPSI +V+ LTL +R + G Sbjct: 74 GMGREDLRSAVGRHATSKIRDLIDLERIASLGFRGEALPSIASVARLTLTTRSRAEDHGW 133 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ ++G ++ V P PGT V VRDLF IPAR FL+++Q E I +++R+A++ Sbjct: 134 RLELNGGELLDEVAPAPHPPGTSVVVRDLFHNIPARRKFLRTDQTELRHIQGLVKRIALS 193 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V F + Y++ T+ R+++++G +F+ ++ L+ ++ + L G+ G Sbjct: 194 RPDVGFELNCHGRCNYRLAPTGTSVEQEARLAELLGREFVGQSLVLDAEAAGLRLHGWIG 253 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +P+ R + Y+++NGR ++D+ IR AYA+ + ++PV VL L +DP +VDVN Sbjct: 254 LPSAARAQTDLQYLYLNGRMIRDRLAGHAIRRAYADLLYKEKHPVYVLYLGMDPAEVDVN 313 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS----SFHQDNAPKTH 354 VHP+K +RFR P ++ +F+ + +A+ + + Q+ P H Sbjct: 314 VHPSKYEVRFREPRLVYDFLFHQLHRALAHPNGAAEGRRYRAAPKRTCVDSPQEQQPTCH 373 Query: 355 LPKYATSLTNTQEKLFL---QENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL----- 406 P ++ E L S + + + + T+ + D + S A Sbjct: 374 SPWQSSIAFPVAEATQLYAAAGEARSAGEPIGNGESTWGSEGDSLALSRALPQHPVPAAG 433 Query: 407 ---------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 G A AQ+H Y++S+ GL++VD HAAHER+++E+++ + + + Q L Sbjct: 434 RGEEATPPLGYAVAQLHGVYVLSEDAAGLILVDMHAAHERIVYERLKDELDREGLAGQAL 493 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P + + E + RL + +R P+ + +R IPA+L + +I LLRD++ Sbjct: 494 LVPLRVGVTPAEADAAEDCAALFRRLEFEVDRAAPDVLVVRRIPALLGQIDITALLRDVL 553 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 ++ L+ I +LATMAC+GS+R+ R++ EMN LLR+ME+ N QCNHGR Sbjct: 554 SGLLIQGVGGQLEAVINQVLATMACHGSVRAQRRLTITEMNALLRDMERTRNIGQCNHGR 613 Query: 578 PTFIKLKLSDIEKLFGR 594 PT+ +L L+++++LF R Sbjct: 614 PTWTRLTLAELDRLFLR 630 >gi|20807805|ref|NP_622976.1| DNA mismatch repair ATPase [Thermoanaerobacter tengcongensis MB4] gi|25090753|sp|Q8RA70|MUTL_THETN RecName: Full=DNA mismatch repair protein mutL gi|20516363|gb|AAM24580.1| DNA mismatch repair enzyme (predicted ATPase) [Thermoanaerobacter tengcongensis MB4] Length = 590 Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 181/596 (30%), Positives = 315/596 (52%), Gaps = 13/596 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L EK +N+IAAGE++ERP+ +KEL+ENS+DA S + I GG + ++TD+G Sbjct: 3 KIHLLDEKTVNKIAAGEVVERPASIVKELVENSIDAGSKNITVEILEGGIPYIKVTDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + +A +RH TSKI +D NI T GFRGEAL SI AVS + L ++ G Sbjct: 63 GMNEIDAVLAFERHATSKIRSDEDLFNITTLGFRGEALASIAAVSKVVLQTKEENETFGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G KI GT VEV+D+FF PAR FLK E +T+V+ R+ ++ Sbjct: 123 RLVVEGGKILEKTRCGCQKGTSVEVKDVFFNTPARRKFLKRPSTEAMYVTEVVTRLCLSN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF + K ++ S NG+ + I ++ G++ + + ++ ++ ++ + Sbjct: 183 PGISFKYVKDKKVQF---ITSGNGSIEDVILRLFGKEVHSALIFSEFEAEDLKVKAFATK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 N N N + ++NGR V++K + + + A+ +P RYP V L LEI+PR +DVN+ Sbjct: 240 NFLNYSNRNMQFFYVNGRYVKNKTLSAAVDEAFKTYVPSDRYPGVFLYLEINPRFIDVNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ-DNAPKTHLPKY 358 HP+K ++F + I + ++I++A+ + + L K + + Q K LP + Sbjct: 300 HPSKLEVKFSDDRRIFESVYRTIREALRESNLIPEVKLEKDLKNEEGQIGEQVKLSLPLF 359 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 +F++E + + + S D+ E + Y+ Sbjct: 360 EVKEKTDDGAIFVREEVKTEEKIDKAPKHESSSDS----ERNVKRLSDIRIVGTLFSTYV 415 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 I + D I+DQHAAHER+++EK+ + ++ S+ + P +++L G+ ++ + E Sbjct: 416 IVEKGDVFYIIDQHAAHERILYEKLVSQYE--RVQSRQVTFPIVVELQPGDMEIVGQERE 473 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L++LG E FG N++ +RE+P IL + +L +I++ + D + + + E I A Sbjct: 474 LLYKLGYVFEEFGNNSVVLREVPVILGQPEAKKLFVEIVERLRDKDFSSKVSFKEEEI-A 532 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 TMAC ++++ + E+ +L +++ N C HGRP I + + +EK+F R Sbjct: 533 TMACKAAVKAMDTLSENEIYKLFEDLKIAENPYTCPHGRPVIISMTKTQLEKMFKR 588 >gi|254479236|ref|ZP_05092581.1| DNA mismatch repair protein MutL [Carboxydibrachium pacificum DSM 12653] gi|214034837|gb|EEB75566.1| DNA mismatch repair protein MutL [Carboxydibrachium pacificum DSM 12653] Length = 590 Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 181/596 (30%), Positives = 315/596 (52%), Gaps = 13/596 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L EK +N+IAAGE++ERP+ +KEL+ENS+DA S + I GG + ++TD+G Sbjct: 3 KIHLLDEKTVNKIAAGEVVERPASIVKELVENSIDAGSKNITVEILEGGIPYIKVTDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + +A +RH TSKI +D NI T GFRGEAL SI AVS + L ++ G Sbjct: 63 GMNEIDAVLAFERHATSKIKSDEDLFNITTLGFRGEALASIAAVSKVVLQTKEENETFGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G KI GT VEV+D+FF PAR FLK E +T+V+ R+ ++ Sbjct: 123 RLVVEGGKILEKTRCGCQKGTSVEVKDVFFNTPARRKFLKRPSTEAMYVTEVVTRLCLSN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF + K ++ S NG+ + I ++ G++ + + ++ ++ ++ + Sbjct: 183 PGISFKYVKDKKVQF---ITSGNGSIEDVILRLFGKEIHSALIFSEFEAEDLKVKAFATK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 N N N + ++NGR V++K + + + A+ +P RYP V L LEI+PR +DVN+ Sbjct: 240 NFLNYSNRNMQFFYVNGRYVKNKTLSAAVDEAFKTYVPSDRYPGVFLYLEINPRFIDVNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ-DNAPKTHLPKY 358 HP+K ++F + I + ++I++A+ + + L K + + Q K LP + Sbjct: 300 HPSKLEVKFSDDRRIFESVYRTIREALRESNLIPEVKLEKDLKNEEGQIGEQVKLSLPLF 359 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 +F++E + + + S D+ E + Y+ Sbjct: 360 EVKEKTDDGAIFVREEVKTEEKIDKAPKHESSSDS----ERNVKRLSDIRIVGTLFSTYV 415 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 I + D I+DQHAAHER+++EK+ + ++ S+ + P +++L G+ ++ + E Sbjct: 416 IVEKGDVFYIIDQHAAHERILYEKLVSQYE--RVQSRQVTFPIVVELQPGDMEIVGQERE 473 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L++LG E FG N++ +RE+P IL + +L +I++ + D + + + E I A Sbjct: 474 LLYKLGYVFEEFGNNSVVLREVPVILGQPEAKKLFVEIVERLRDKDFSSKVSFKEEEI-A 532 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 TMAC ++++ + E+ +L +++ N C HGRP I + + +EK+F R Sbjct: 533 TMACKAAVKAMDTLSENEIYKLFEDLKIAENPYTCPHGRPVIISMTKTQLEKMFKR 588 >gi|159899518|ref|YP_001545765.1| DNA mismatch repair protein MutL [Herpetosiphon aurantiacus ATCC 23779] gi|159892557|gb|ABX05637.1| DNA mismatch repair protein MutL [Herpetosiphon aurantiacus ATCC 23779] Length = 631 Score = 528 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 182/633 (28%), Positives = 319/633 (50%), Gaps = 43/633 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L + QIAAGE++ERP+ +KELIENS+DA ++ + GGK +I DNG Sbjct: 1 MPIRVLDPTLAAQIAAGEVVERPASVVKELIENSVDAGATEIRVEAREGGKRELRIQDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ S+E+ A RH TSK+++ D +I T GFRGEALPSI +V+ +T ++R + G Sbjct: 61 CGIASDEVETAFLRHATSKVTEIEDLFSIRTLGFRGEALPSIASVAQVTCLTRTAADEVG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ I+G +I + P + GT +R+LF+ PARL F++S+ E + I+ ++ + A+A Sbjct: 121 TELRIAGGEIQAKTPRGCSVGTTFTIRNLFYNTPARLKFMRSDATEMSQISTIVTQYALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE----KSNEITLQ 234 YP + +T + NG + + ++ G D + ++ + + + Sbjct: 181 YPNIRWTLLLDGKLALQ---TPGNGRLLDALIELYGIDVGREMISVDRTSEAEDETVRVH 237 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDK-FILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G+ P+ R + ++F+N R ++ + ++ I AY + GR+P+V L +E++P Sbjct: 238 GFVSQPSTFRAARSYMHLFVNQRWIKPQGNLVYMIEEAYHTLLMKGRHPIVALNIELEPE 297 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ------ 347 VDVNVHP KS ++FRN + + + +++++A+ + + S + Sbjct: 298 AVDVNVHPTKSEVKFRNQSHVYGALTKAVREALAAQSTIRAWTGFGANESVNRRVELRSP 357 Query: 348 --------------DNAPKTHLPKYAT------------SLTNTQEKLFLQENRLSTNDL 381 D+AP P+ Q + +++ L Sbjct: 358 NGERRGSSNDAPLFDDAPAAPRPQVNNYPDDDFDSTVNLPPIAKQARFETPTTSQTSSFL 417 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 P + + Q+++ YI+++++DG+ +VDQHAAHER+++E Sbjct: 418 PPQQQAFDPAYAPSMPAPGEAKLPMLRVVGQVNETYIVAESSDGMYLVDQHAAHERVVYE 477 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 ++ + I QTL+ + I+L L+ H DL + G +AE FG + +R +P Sbjct: 478 RLMAEHQDVPIERQTLMLAQPIELPPAVTRLLSAHLADLEQWGFEAEEFGEGTLMLRAVP 537 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 + L I L +I D + + DR E +L T+AC+ SIR+G+ + EM +LL Sbjct: 538 SGLHVGQIATALMEIADHLSYEGGATS-DDRREKMLTTIACHSSIRAGKTLTHEEMRQLL 596 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++E+ C HGRPT +++ IE+ FGR Sbjct: 597 QQLERCEMPRTCPHGRPTMLQITQGQIERQFGR 629 >gi|157826372|ref|YP_001494092.1| DNA mismatch repair protein [Rickettsia akari str. Hartford] gi|166232102|sp|A8GQA9|MUTL_RICAH RecName: Full=DNA mismatch repair protein mutL gi|157800330|gb|ABV75584.1| DNA mismatch repair protein [Rickettsia akari str. Hartford] Length = 609 Score = 527 bits (1358), Expect = e-147, Method: Composition-based stats. Identities = 251/609 (41%), Positives = 373/609 (61%), Gaps = 15/609 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE IN+IAAGE+IERP+ +KEL+EN++DA S++++ ++ GK+ I+D+G Sbjct: 1 MTIKFLSENTINRIAAGEVIERPASVVKELVENAVDAGSTKIDIILERAGKNLIIISDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK+ + DF NIHTFGFRGEALPSI A+S + + S+ + Sbjct: 61 IGMTDKELEIAVERHTTSKLDESDFLNIHTFGFRGEALPSIAAISKMLITSKKQGYDKAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G V N GT +E+RDLFF PARL FL+S++ E DV++++A+A+ Sbjct: 121 QIKLIGGNEKQVTISVHNEGTKIEIRDLFFATPARLKFLRSDKTELVATVDVVKKIALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTN--GNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 PK+SF+ + N K + + N +RI VIG+DFI NA ++ K+ + ++ GYT Sbjct: 181 PKISFSLTHDDRNLLKFKGHNKDVETNLKQRIIDVIGDDFIKNAAYIDFKTPDFSICGYT 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 IPT+NR ++ ++FIN R V+DK + +R AY + + RYP+ + L+IDP+ VDV Sbjct: 241 SIPTYNRASSEDQFLFINNRPVKDKLLQVALRVAYQDYLARDRYPLCAIFLQIDPQLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK+ +RF +P +RN +I++I+ A+ TS+ ++ + F K Sbjct: 301 NVHPAKAEVRFHDPNYVRNLLIEAIKNALTNTSHVTSTTIASDALQLFKNHLVNKQPSVS 360 Query: 358 YATSLTN--TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE---------ATHYQL 406 A S+ + T + + + ST + +E E Y+L Sbjct: 361 KAVSVNSKPTDYRPAMSPSFKSTPNTDCQKLIDTLPHAKIEQEVERRIEREQQAHKQYKL 420 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 G A AQ+H YIISQT D +VI DQHAAHERL +EK++ + ++ Q LL PEI++L Sbjct: 421 GAAKAQLHTTYIISQTEDSIVITDQHAAHERLGYEKIKDYLKTEELIRQRLLIPEIVELP 480 Query: 467 -EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 E + E+ E L++LG+ E+FG +I + EIP IL N+ +L+ D+ D + D Sbjct: 481 NERNADSLYENREKLYKLGLTLEKFGEKSIIVTEIPNILGDVNVQKLIHDLADHLSDFGE 540 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 L + IE++ T AC+ SIR+GRK+ + EMN LLR+ME P S QCNHGRPT+I+LKL Sbjct: 541 NIALTELIEHVTETYACHYSIRAGRKLSADEMNALLRQMENTPFSGQCNHGRPTYIELKL 600 Query: 586 SDIEKLFGR 594 DIE+LFGR Sbjct: 601 KDIERLFGR 609 >gi|90416479|ref|ZP_01224410.1| DNA mismatch repair protein [marine gamma proteobacterium HTCC2207] gi|90331678|gb|EAS46906.1| DNA mismatch repair protein [marine gamma proteobacterium HTCC2207] Length = 625 Score = 527 bits (1358), Expect = e-147, Method: Composition-based stats. Identities = 213/623 (34%), Positives = 331/623 (53%), Gaps = 34/623 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA + +E I GG +I D+G G Sbjct: 4 IKILSPQLANQIAAGEVVERPASVLKELVENSLDAGAQSIEIDIEQGGVKLIRIRDDGGG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A+ RH TSKI D D + T GFRGEAL SI +VS L+L S ++ + Sbjct: 64 IDHDDLALALSRHATSKIDDLEDLEAVATLGFRGEALASIASVSRLSLTSN-NGGSSAWR 122 Query: 121 IAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G + P + GT VEVRDLFF PAR FL++E+ E N I D I+++A++ Sbjct: 123 AISEGRDMQVEVTPASHPQGTSVEVRDLFFNTPARRKFLRTEKTEYNRIDDSIKKLALSR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V+F + + + T +R++ + G F+ A+ ++ + L G+ G+ Sbjct: 183 FDVAFNLRHNQRAQLSLRPAKTQLEQEKRVADICGTTFMEQALYVDNTRPGLRLWGWIGL 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF+R A+ + F+NGR ++DK + +R AY + + GR+P VL LEI P VDVNV Sbjct: 243 PTFSRSQADLQHFFVNGRCIRDKVVSHAVRQAYQDVLYHGRHPAFVLFLEITPADVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK------- 352 HP K +RFR I +FI +++KA+ + L F D + + Sbjct: 303 HPTKHEVRFRESGSIHSFISSTLKKALAED--RPQDHLQSNSTGEFPSDGSAQHTGGGGQ 360 Query: 353 ----THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE---------- 398 + P + +R + + + + Sbjct: 361 FSGMVNQPDPNWQAAPQSQPAMQFSSRPNFGNSSSGAMSGSAGSMQNYQSLYSTSGINLP 420 Query: 399 -------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 + LG A AQ+ YI+++ +GL+IVD HAAHER+ +E+M+ F+ Sbjct: 421 ESGSELGDQQDIPPLGYAIAQLKGIYILAENREGLIIVDMHAAHERITYERMKSAFDDQG 480 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + SQ LL PE + + + E +H+E +LG ER ++ +REIPAIL + Sbjct: 481 LISQPLLVPESLAVSQREADAAEQHNEVFAKLGFVVERAAAESVIVREIPAILRGSEVEA 540 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 LLRD++ ++++ + ++D I IL+TMAC+GS+R+ RK+ EMN LLR+ME S Sbjct: 541 LLRDVLSDLLEHGNSERIRDHINEILSTMACHGSVRANRKLSVTEMNALLRDMEATERSG 600 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+ +L L ++KLF R Sbjct: 601 QCNHGRPTWSQLTLDQLDKLFLR 623 >gi|194290629|ref|YP_002006536.1| DNA mismatch repair protein [Cupriavidus taiwanensis LMG 19424] gi|193224464|emb|CAQ70475.1| methyl-directed mismatch repair protein [Cupriavidus taiwanensis LMG 19424] Length = 660 Score = 527 bits (1357), Expect = e-147, Method: Composition-based stats. Identities = 193/648 (29%), Positives = 325/648 (50%), Gaps = 62/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ +KEL+EN+LDA ++++ + GG ITDNG Sbjct: 18 PIRPLPDQLISQIAAGEVVERPASVVKELLENALDAGATQLGIRLEEGGVRRIVITDNGC 77 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + E+P+A+ RH TSKI+ D+ ++ T GFRGEAL SI +VS +TL SR + Sbjct: 78 GIPAAELPVALMRHATSKIASLDELESVLTLGFRGEALASIASVSQMTLTSRTAADAHAT 137 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q++ +++P + GT V+V+ L+F PAR FLK+EQ E +++RR+A+A Sbjct: 138 QVSADS---GALQPASGGVGTTVDVQHLYFNTPARRKFLKTEQTELGHCLEMVRRVALAR 194 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ + N G+ R +QV+G DF + L+E ++ ++L G+ G+ Sbjct: 195 PDVTISVHHNGKPLEHWNA----GDVATRTAQVLGNDFARARLALDEHADTLSLYGFAGL 250 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +RG +Q Y F+NGR V+DK + +R+AY + + R+P VL L++ P VDVNV Sbjct: 251 PTASRGRPDQQYFFVNGRFVRDKLLNHAVRSAYQDVLHGDRFPSYVLCLDLPPEMVDVNV 310 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH-QDNAPKTHLPKY 358 HP+K +RFR + F+ ++Q+ + ++ + L A P Sbjct: 311 HPSKIEVRFRESRAVHQFVYHAVQRCLARQAGANGDSLHTDADGEITLPPGAATPAGPAR 370 Query: 359 ATSLTNTQ-------------------------EKLFLQENRLSTNDLLPSDDPTYSEDN 393 + T Q + R + + Sbjct: 371 PGAGTPAQWINYSAARQTELGIAQPRQAYLGMVREATAPAPRPYGAPASGAGGWAGASAQ 430 Query: 394 DPVEESEATHYQLGIACAQIHQ------------------NYIISQTTDGLVIVDQHA-- 433 P ++ + G + + Y I+Q V+ Sbjct: 431 PPAWLADVQAARAGDPPGLLDRLPPAPAPDETGAADEHPLGYAIAQLHGIYVLAQNARGL 490 Query: 434 -------AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 AHER+++E+++ ++ ++ Q LL P + E + EH E L LG Sbjct: 491 VLVDMHAAHERILYEQIKAALDARELAVQPLLIPVTLPASPVEIGVAEEHQETLTLLGFD 550 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 P +A+R +PA+L + + L RD++ ++ + L +R +LAT+AC+ ++ Sbjct: 551 IAPVSPTTLAVRAVPALLQQADAEALARDVLRDLHAYGGSRVLAERRNELLATLACHSAV 610 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R+ RK+ EMN LLR+ME+ + QCNHGRPT+++L ++++++LF R Sbjct: 611 RANRKLTVEEMNALLRQMEQTERADQCNHGRPTWVQLTVTELDRLFLR 658 >gi|261392296|emb|CAX49822.1| DNA mismatch repair protein MutL [Neisseria meningitidis 8013] Length = 658 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 211/658 (32%), Positives = 342/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIKLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTESVSNAGEVLHDITGVTPAPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 +++ K + + KT Y ++ Q L L+E+R + N Sbjct: 359 DSENLFDRASNYPTGNKPDTRNAFGASGKTAPMPYQSAYAPQQRSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSRFEQARFGNMPSETPAPQTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPVTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 + L G++ G N +A+R +PA+L K ++ L +D++ E+ ++ T+++ I Sbjct: 539 ADALAGFGLELSDMGGNTLAVRTVPAMLGKADVVSLAKDVLGELAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSVRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|239501497|ref|ZP_04660807.1| DNA mismatch repair ATPase [Acinetobacter baumannii AB900] Length = 650 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 207/639 (32%), Positives = 342/639 (53%), Gaps = 46/639 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERPS +KEL+ENS+DA ++ + IA GG + +I DNG Sbjct: 10 RIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIVRIAQGGSTLIEIIDNGH 69 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+AV RH TSKI ++D I + GFRGEAL SI AVS LTL S ++ G Sbjct: 70 GIHPDDLPLAVMRHATSKIKTAEDLHAIVSLGFRGEALASIAAVSRLTLTSSQDESGIGH 129 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ V+ VA GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 130 QVEVNGTAFDHQQVQAVAAQKGTHIRVQDLFFNVPARRKFLKKPTTEFGHIEEIVRRLAL 189 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + F + R + + +R+ Q++G+ F+ NA ++ +S + L G+ Sbjct: 190 THFDIRFVLEHNDNIRINLPIADSGELRFQRVQQLLGQQFVQNAYWIDAESINMRLSGWL 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP +DV Sbjct: 250 GHPSDARAQADLQYVYVNGRIVKDKTISHALRMAYDGILHGHQHSSYLLFLEVDPENIDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------------------- 335 NVHP K IRF N + F+ ++ + + +++ Sbjct: 310 NVHPTKHEIRFLNQREVHEFVRHYAKETLAQFQTASADLAQAMKVDDTQNLSVQPQPKYQ 369 Query: 336 ---VLSKKMISSFHQDNAPKTHLPKYA--TSLTNTQEKLFLQENRLSTND---------- 380 L + ++ + P + P T N++ + + + Sbjct: 370 EQFTLHRTAQAADTAVDKPNGYQPSTELLTDFNNSRPQAVHYAEQTPKYNGSAQLNNALK 429 Query: 381 ----LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 L +S D + ++ + LGIA AQ+H YI++Q T+GL+IVD HAAHE Sbjct: 430 TYLAPLRDQPTNFSVDENIEPVAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHE 489 Query: 437 RLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 R++ ++M+ ++ + TSQ LL P++I + + + + L RLG++ + +G + Sbjct: 490 RILLQQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLEIDLYGDEQV 549 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 +R +PAIL K + L+ ++++++ + L + + +LA MAC+G++R+ R++ Sbjct: 550 IVRGVPAILQKADFENLIPELLNDLDPNDEAQGLLQKRDELLAGMACHGAVRAHRQLSLS 609 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME+ +SQCNHGRPT+ LS ++KLF R Sbjct: 610 EMNALLRQMEQTEFASQCNHGRPTWRAFPLSQLDKLFAR 648 >gi|268316526|ref|YP_003290245.1| DNA mismatch repair protein MutL [Rhodothermus marinus DSM 4252] gi|262334060|gb|ACY47857.1| DNA mismatch repair protein MutL [Rhodothermus marinus DSM 4252] Length = 608 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 176/600 (29%), Positives = 308/600 (51%), Gaps = 12/600 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR + E + N+IAAGE+++RP+ +KEL+EN+LDA + + ++ GK+ Q+ D+G G Sbjct: 12 IRIMPESLANKIAAGEVVQRPASVVKELVENALDAGARHITVILKDAGKTLVQVVDDGCG 71 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + + QRH TSKI DD IHT GFRGEAL SI AV+ + L ++ Q+ G + Sbjct: 72 MSPADARLCFQRHATSKIRTIDDLERIHTLGFRGEALASIAAVARVELKTKRAQDAAGYR 131 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I G ++ + P A GT V VR+LF+ +PAR NFLK+ E I + + +A+++P Sbjct: 132 VQIEGGQLIAAEPCATANGTSVAVRNLFYNVPARRNFLKTPATEFKHIIETFQVLALSHP 191 Query: 181 KVSFTFSTIKSNRYKMNF---QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +V FT Y++ S RI + G ++ + + E ++ ++++G+ Sbjct: 192 EVGFTLIHDDVEIYRLVPETDPSPAERLRRRIGTLFGPEYALQTIPVEETTSYLSVRGFL 251 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P +R + + + F+N R V+ +++ + ++Y IP G +P VL LE+DP+ VDV Sbjct: 252 GRPELHRKSRGEQFFFVNRRYVRHRYLEHAVTSSYEHLIPEGAHPFFVLFLELDPKHVDV 311 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K+ ++F + I + +++A+ + L + D A P+ Sbjct: 312 NVHPTKAEVKFDDERGIYGVLRAIVRRALGMADLVPQ--LESAAAVTVPSDVAQTAAAPR 369 Query: 358 YATSLTNTQEKLFLQENR---LSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 S + +R +++ + ES+ + Q+H Sbjct: 370 TEVSGATPLRMPPGEVSRRLYAVEPEMVEPIPQQTVLPSSVRPESDEETPEHDTLIWQVH 429 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 YI++Q GL+++DQ+AAHER+++E+ ++ S SQ LL P+ ++ + ALI Sbjct: 430 DRYILTQIRSGLLLIDQNAAHERILYERALRNLESGFGLSQQLLFPQTLEFSPADFALIE 489 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 E +L LG E F + +R +P + + +L D++ + + L R E Sbjct: 490 ELMPELRALGFDLELFSGRTVVVRGVPDDIRPGDERTMLEDLLAQYKAN-LPLRLPSR-E 547 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N+ ++A +IR G ++ +M L+ ++ GRPT I+L L ++E+ FGR Sbjct: 548 NLARSVARRNAIRPGTRLTEKQMRTLIDQLFLCETPYVSPTGRPTMIRLTLEELERRFGR 607 >gi|291524850|emb|CBK90437.1| DNA mismatch repair protein MutL [Eubacterium rectale DSM 17629] Length = 618 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 185/629 (29%), Positives = 302/629 (48%), Gaps = 48/629 (7%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I L+++ I++IAAGE++ERP +KEL+EN++DA S+ + I GG SF +ITDN Sbjct: 1 MPNIAILNQETIDKIAAGEVVERPCSVVKELVENAIDAGSTAITVEIKEGGISFIRITDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +++ +A RH TSKI +D + + GFRGEAL SI AV+ + L+++ T Sbjct: 61 GCGIERDQVAVAFYRHSTSKIRSAEDLLTVKSLGFRGEALSSISAVARVELITKTYDELT 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G K S + GT V+DLF+ +PAR FLK+ Q E + I+D++ ++A+ Sbjct: 121 GTRYVIEGSKELSNEEIGAPDGTTFIVKDLFYNVPARRKFLKTAQTEGSYISDMVEKLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P +SF F + S NGN + I + G + ++ +E+ + ++G+ Sbjct: 181 SHPDISFKFINNNQTKLH---TSGNGNRKDIIYHIFGREISSSLLEVKHECEYFKVEGFI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P RGN N FINGR V+ + I AY + +YP VL +DV Sbjct: 238 GKPVITRGNRNYENYFINGRYVKSNILSRAIEEAYKSFLMQHQYPFTVLYFTFFSE-LDV 296 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RF N I + +I ++ K + + APK + + Sbjct: 297 NVHPTKMELRFDNNNEIYVELCDTIYAILSHKEMIPEVPVD--------STPAPKKIVHE 348 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI--------- 408 Y + EK + E R + + + T + N E A + Sbjct: 349 YKEPIPEPFEKRRINEVRAAESRSVYGQSVTSTVKNYSATEPAAKAPETSTAYEPAQVVT 408 Query: 409 -----------------------ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 Q+ + Y + + D L I+DQHAAHE++++EK Sbjct: 409 GTQQTLGDYDKVFLTESSKKQFSIIGQLFKTYWLIEFEDKLYIIDQHAAHEKVLYEKTMA 468 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 + TSQ + P ++ L EC ++ ++ + + G + E FG I IP L Sbjct: 469 RLANKDFTSQRISPPIVMTLDARECEMLEKYRPQIEQFGYEVEHFGGKEYMISAIPDNLF 528 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 ++ L +++D+ + +T D I +A+M+C +++ K+ E+N+L+ E+ Sbjct: 529 NIDMKDLFIEMLDDFSN-ATGRQTPDIITEKVASMSCKAAVKGNDKLTLPEINKLIDELL 587 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N C HGRPT I + +IEK F R Sbjct: 588 SLDNPYNCPHGRPTIISMSKYEIEKKFKR 616 >gi|15614931|ref|NP_243234.1| DNA mismatch repair protein [Bacillus halodurans C-125] gi|20139217|sp|Q9KAC1|MUTL_BACHD RecName: Full=DNA mismatch repair protein mutL gi|10174988|dbj|BAB06087.1| DNA mismatch repair protein [Bacillus halodurans C-125] Length = 637 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 183/638 (28%), Positives = 312/638 (48%), Gaps = 50/638 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KL + + N+IAAGE++ERP+ +KEL+EN+LDA S ++ + GG ++ D+G Sbjct: 3 KIIKLDDHLSNKIAAGEVVERPASVVKELVENALDANSRKITIEVEAGGLDRIRVIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A RH TSKI D I T GFRGEALPSI +VSH+ + + + G Sbjct: 63 GIEREDVETAFFRHATSKIKTDKDLFQIATLGFRGEALPSIASVSHVQIKTST-GGDGGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G I + AM GT + V LF+ PARL ++K+ E I+DV+ R+A+A+ Sbjct: 122 EMVLEGGVIKKIGSTAMGKGTDLTVTQLFYNTPARLKYVKTVHTELGNISDVVNRLALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF N + S NG+ + I+ + G V L+ ++ + T+ G+ Sbjct: 182 PYVSFQLFHNGKNVLR---TSGNGDQLQVIAAIYGRTVAKQMVPLSGETIDFTVSGFAAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + + +NGR +++ + I+ + +P+GRYP+ ++ +E+DP+ +DVNV Sbjct: 239 PEVTRASRQYMSLLVNGRYIRNVALSKAIQQGFHTLLPIGRYPIAIVNIELDPQLIDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV--------------LSKKMISSF 345 HP+K +R + + ++I++A K+ + + S+ Sbjct: 299 HPSKLEVRVSKEEELCRLVTETIERAFKKEQLIPEATKPTGGKQKSEQLSFTLDDFTSAK 358 Query: 346 HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS--------------- 390 ++ T + ++ + + QE R +NDL + + Sbjct: 359 PSEDRGSTSSNEENEQRSSIDKNVLFQEERKLSNDLPSINMVREASASVEPALEKEPPAA 418 Query: 391 ----------EDNDPVEESE----ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 E EE+ A Q+H YI++Q GL I+DQHAA E Sbjct: 419 ELTAGAKGAMEQASMEEETSNSLPANRVPTMYPIGQMHGTYILAQNDQGLYIIDQHAAQE 478 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q L+ P ++ E A I EH EDL ++G+ E FGP Sbjct: 479 RMKYEYFREKVGEVTNELQELIVPITVECTLQEAAYIEEHLEDLKQVGLFFEEFGPQTFM 538 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 IR+ P K + +R++ID++++ ++ E + M+C +I++ R ++ E Sbjct: 539 IRQHPTWFPKGLEEETIREMIDQLMEKRKVD-IKKLREEVAILMSCKAAIKANRHLRHDE 597 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M LL + K+ + C HGRP +++ ++EK+F R Sbjct: 598 MYALLEALRKSSDPFTCPHGRPIIVQITTYEMEKMFKR 635 >gi|260554622|ref|ZP_05826843.1| DNA mismatch repair ATPase [Acinetobacter baumannii ATCC 19606] gi|260411164|gb|EEX04461.1| DNA mismatch repair ATPase [Acinetobacter baumannii ATCC 19606] Length = 650 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 207/639 (32%), Positives = 342/639 (53%), Gaps = 46/639 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERPS +KEL+ENS+DA ++ + IA GG + +I DNG Sbjct: 10 RIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIVRIAQGGSTLIEIIDNGH 69 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+AV RH TSKI ++D I + GFRGEAL SI AVS LTL S ++ G Sbjct: 70 GIHPDDLPLAVMRHATSKIKTAEDLHAIVSLGFRGEALASIAAVSRLTLTSSQDESGIGH 129 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ V+ VA GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 130 QVEVNGTAFDHQQVQAVAAQKGTHIRVQDLFFNVPARRKFLKKPTTEFGHIEEIVRRLAL 189 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + F + R + + +R+ Q++G+ F+ NA ++ +S + L G+ Sbjct: 190 THFDIRFVLEHNDNIRINLPIADSGELRFQRVQQLLGQQFVQNAYWIDAESINMRLSGWL 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP +DV Sbjct: 250 GHPSDARAQADLQYVYVNGRIVKDKTISHALRMAYDGILHGHQHSSYLLFLEVDPENIDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------------------- 335 NVHP K IRF N + F+ ++ + + +++ Sbjct: 310 NVHPTKHEIRFLNQREVHEFVRHYAKETLAQFQTASADLAQAMKVDDIQNLSVQPQPKYQ 369 Query: 336 ---VLSKKMISSFHQDNAPKTHLPKYA--TSLTNTQEKLFLQENRLSTND---------- 380 L + ++ + P + P T N++ + + + Sbjct: 370 EQFTLHRTAQAADTAVDKPNGYQPSTELLTDFNNSRPQAVHYAEQTPKYNGSAQLNNALK 429 Query: 381 ----LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 L +S D + ++ + LGIA AQ+H YI++Q T+GL+IVD HAAHE Sbjct: 430 TYLAPLRDQPANFSVDENIEPVAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHE 489 Query: 437 RLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 R++ ++M+ ++ + TSQ LL P++I + + + + L RLG++ + +G + Sbjct: 490 RILLQQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLEIDLYGDEQV 549 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 +R +PAIL K + L+ ++++++ + L + + +LA MAC+G++R+ R++ Sbjct: 550 IVRGVPAILQKADFENLIPELLNDLDPNDEAQGLLQKRDELLAGMACHGAVRAHRQLSLS 609 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME+ +SQCNHGRPT+ LS ++KLF R Sbjct: 610 EMNALLRQMEQTEFASQCNHGRPTWRAFPLSQLDKLFAR 648 >gi|154246983|ref|YP_001417941.1| DNA mismatch repair protein [Xanthobacter autotrophicus Py2] gi|154161068|gb|ABS68284.1| DNA mismatch repair protein MutL [Xanthobacter autotrophicus Py2] Length = 643 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 235/618 (38%), Positives = 367/618 (59%), Gaps = 24/618 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L +I++IAAGE++ERP+ +KEL+EN+LDA + +E VI GGG+ +++D+G Sbjct: 25 MLIRRLPPVLIDRIAAGEVVERPAAVVKELVENALDAGARAIEVVIQGGGRRLVRVSDDG 84 Query: 61 FGMTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +++ + V+RH TSK++ +D +I T GFRGEALPSIG+V+HL + SRP Sbjct: 85 SGMGPDDLALCVERHATSKLAGEDLLSISTLGFRGEALPSIGSVAHLAIASRPRDAAHAF 144 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G ++ RP A+ GT VEVRDLF+ PARL FLKS++ E DV+RR+A+A Sbjct: 145 EVRVDGGVVTPPRPAALGGGTRVEVRDLFYATPARLKFLKSDRAEGAAAADVVRRLALAR 204 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V+FT T + ++ + + R++ V+G + N V +N +++ L+G G Sbjct: 205 PDVAFTLVTDERAAVTFPARADDADGRAARLADVLGAEAGRNVVAVNGIRDDVVLEGLAG 264 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF++ N+ Y+F+NGR V+DK ++ +R AYA+ +P RYPV+ L + +DPR VDVN Sbjct: 265 LPTFSKANSLSQYLFVNGRPVRDKLLMGAVRAAYADLLPSDRYPVLALFISLDPRDVDVN 324 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK+ +RFR+ +R I++++ A+ + ST+ ++ ++++ Sbjct: 325 VHPAKTEVRFRDGGNVRALIVRTLSDALGARIPSTAGTMADRLVALARTPELGPRAAFAP 384 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT---------------- 402 A F D P + EE +A Sbjct: 385 AAPFATPGGGAFAGFRPAPALDYDWRQSPARPMPSGLGEEEQARLDIAEPSADARADAAP 444 Query: 403 ------HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 LG A AQ+H+ YI++QT +GLV+VDQHAAHERL++EK++ + Q Sbjct: 445 VSAVDLDRPLGAARAQLHETYIVAQTREGLVLVDQHAAHERLVYEKLKAALARDGVGRQG 504 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 LL P ++DL + + E DL LG+ E FGP A+ +RE+PA+L ++ +L+ D+ Sbjct: 505 LLIPAVVDLDPADADRLTERAGDLAALGLVLESFGPGAVLVREVPALLKDADVTRLVTDL 564 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 + + L+ R+ ++ ATMAC+GS+R+GR+++ EMN LLREME+ PN+ +CNHG Sbjct: 565 AEHAAEWDDALPLERRLLHVAATMACHGSVRAGRRLKVEEMNALLREMEETPNAGECNHG 624 Query: 577 RPTFIKLKLSDIEKLFGR 594 RPTF+ L L D+EKLF R Sbjct: 625 RPTFVTLSLKDVEKLFAR 642 >gi|184158632|ref|YP_001846971.1| DNA mismatch repair ATPase [Acinetobacter baumannii ACICU] gi|332874328|ref|ZP_08442240.1| DNA mismatch repair protein [Acinetobacter baumannii 6014059] gi|183210226|gb|ACC57624.1| DNA mismatch repair enzyme (predicted ATPase) [Acinetobacter baumannii ACICU] gi|322507604|gb|ADX03058.1| mutL [Acinetobacter baumannii 1656-2] gi|323518550|gb|ADX92931.1| DNA mismatch repair ATPase [Acinetobacter baumannii TCDC-AB0715] gi|332737456|gb|EGJ68371.1| DNA mismatch repair protein [Acinetobacter baumannii 6014059] Length = 650 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 207/639 (32%), Positives = 341/639 (53%), Gaps = 46/639 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERPS +KEL+ENS+DA ++ + IA GG + +I DNG Sbjct: 10 RIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIVRIAQGGSTLIEIIDNGH 69 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+AV RH TSKI ++D I + GFRGEAL SI AVS LTL S ++ G Sbjct: 70 GIHPDDLPLAVMRHATSKIKTAEDLHAIVSLGFRGEALASIAAVSRLTLTSSQDESGIGH 129 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ V+ VA GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 130 QVEVNGTAFDHQQVQAVAAQKGTHIRVQDLFFNVPARRKFLKKPTTEFGHIEEIVRRLAL 189 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + F + R + + +R+ Q++G+ F+ NA ++ +S + L G+ Sbjct: 190 THFDIRFVLEHNDNIRINLPIADSGELRFQRVQQLLGQQFVQNAYWIDAESINMRLSGWL 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP +DV Sbjct: 250 GHPSDARAQADLQYVYVNGRIVKDKTISHALRMAYDGILHGHQHSSYLLFLEVDPENIDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------------------- 335 NVHP K IRF N + F+ ++ + + +++ Sbjct: 310 NVHPTKHEIRFLNQREVHEFVRHYAKETLAQFQTASADLAQAMKVDDTQNLSVQPQPKYQ 369 Query: 336 ---VLSKKMISSFHQDNAPKTHLPKYA--TSLTNTQEKLFLQENRLSTND---------- 380 L + ++ + P + P T N++ + + + Sbjct: 370 EQFTLHRTAQAADTAVDKPNGYQPSTELLTDFNNSRPQSVHYAEQTPKYNGSAQLNNALK 429 Query: 381 ----LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 L +S D ++ + LGIA AQ+H YI++Q T+GL+IVD HAAHE Sbjct: 430 TYLAPLRDQPANFSVDESIEPVAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHE 489 Query: 437 RLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 R++ ++M+ ++ + TSQ LL P++I + + + + L RLG++ + +G + Sbjct: 490 RILLQQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLEIDLYGDEQV 549 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 +R +PAIL K + L+ ++++++ + L + + +LA MAC+G++R+ R++ Sbjct: 550 IVRGVPAILQKADFENLIPELLNDLDPNDEAQGLLQKRDELLAGMACHGAVRAHRQLSLS 609 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME+ +SQCNHGRPT+ LS ++KLF R Sbjct: 610 EMNALLRQMEQTEFASQCNHGRPTWRAFPLSQLDKLFAR 648 >gi|169633284|ref|YP_001707020.1| enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA [Acinetobacter baumannii SDF] gi|169152076|emb|CAP00963.1| enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA [Acinetobacter baumannii] Length = 650 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 207/639 (32%), Positives = 340/639 (53%), Gaps = 46/639 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERPS +KEL+ENS+DA ++ + IA GG + +I DNG Sbjct: 10 RIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIVRIAQGGSTLIEIIDNGH 69 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+AV RH TSKI ++D I + GFRGEAL SI AVS LTL S ++ G Sbjct: 70 GIHPDDLPLAVMRHATSKIKTAEDLHAIVSLGFRGEALASIAAVSRLTLTSSQDESGIGH 129 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ V+ VA GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 130 QVEVNGTAFDHQQVQAVAAQKGTHIRVQDLFFNVPARRKFLKKPTTEFGHIEEIVRRLAL 189 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + F + R + + +R+ Q++G+ F+ NA ++ +S + L G+ Sbjct: 190 THFDIRFVLEHNDNIRINLPIADSGELRFQRVQQLLGQQFVQNAYWIDAESINMRLSGWL 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP +DV Sbjct: 250 GHPSDARAQADLQYVYVNGRIVKDKTISHALRMAYDGILHGHQHSSYLLFLEVDPENIDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------------------- 335 NVHP K IRF N + F+ ++ + + +++ Sbjct: 310 NVHPTKHEIRFLNQREVHEFVRHYAKETLAQFQTASADLAQAMKVDDTQNLSVQPQPKYQ 369 Query: 336 ---VLSKKMISSFHQDNAPKTHLPKYA--TSLTNTQEKLFLQENRLSTND---------- 380 L + ++ + P + P T N++ + + + Sbjct: 370 EQFTLHRTAQAADTAVDKPNGYQPSTELLTDFNNSRPQSVHYAEQTPKYNGSAQLNNALK 429 Query: 381 ----LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 L +S D + + LGIA AQ+H YI++Q T+GL+IVD HAAHE Sbjct: 430 TYLAPLRDQPANFSVDESIEPVPKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHE 489 Query: 437 RLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 R++ ++M+ ++ + TSQ LL P++I + + + + L RLG++ + +G + Sbjct: 490 RILLKQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLEIDLYGDEQV 549 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 +R +PAIL K + L+ ++++++ + L + + +LA MAC+G++R+ R++ Sbjct: 550 IVRGVPAILQKADFENLIPELLNDLDPNDEAQGLLQKRDELLAGMACHGAVRAHRQLSLS 609 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME+ +SQCNHGRPT+ LS ++KLF R Sbjct: 610 EMNALLRQMEQTEFASQCNHGRPTWRAFPLSQLDKLFAR 648 >gi|295399905|ref|ZP_06809886.1| DNA mismatch repair protein MutL [Geobacillus thermoglucosidasius C56-YS93] gi|312111576|ref|YP_003989892.1| DNA mismatch repair protein MutL [Geobacillus sp. Y4.1MC1] gi|294978308|gb|EFG53905.1| DNA mismatch repair protein MutL [Geobacillus thermoglucosidasius C56-YS93] gi|311216677|gb|ADP75281.1| DNA mismatch repair protein MutL [Geobacillus sp. Y4.1MC1] Length = 619 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 182/620 (29%), Positives = 297/620 (47%), Gaps = 32/620 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N+IAAGE++ERP+ +KEL+EN++DA S+ +E + G ++ DNG Sbjct: 3 KIRKLDDQLSNKIAAGEVVERPASVVKELVENAIDANSTIIEIELEEAGLMKIRVIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A +RH TSKI D D I T GFRGEALPSI +VS + + + G Sbjct: 63 GMEEDDCLIAFERHATSKIKDEHDLFRIRTLGFRGEALPSIASVSEVEMKTGTGDGP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ G K+ GT + V +LFF PARL ++K+ E ITDV+ R+A+A+ Sbjct: 122 QVVFKGGKLVKRERTTSRKGTDITVSNLFFNTPARLKYMKTIHTELGHITDVVNRLAMAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF ++ + S NG+ + ++ + G D V + +S + T+ G+ + Sbjct: 182 PDISFRLRHHGK---QLLYTSGNGDVRQVLAAIYGMDVAKKMVPIQAESLDFTVHGFISL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I Y +P+GRYP+V L + +DP VDVNV Sbjct: 239 PEVTRASRNYISTIVNGRYVRNIPLMKAIEAGYHTLLPIGRYPIVFLSVAMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA--------- 350 HPAK +RF + + + +++++A+ + + + K + A Sbjct: 299 HPAKLEVRFSKEAELNDLVTKAVRQALQAQTLIPEVTIKPKETPKPKAEQATWTFEHVVK 358 Query: 351 ------------PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 PK +E L L + + + S + E+ Sbjct: 359 EPMVSPLVRVEEPKPSSRMEEAKEEANEESLPLSPPAEAPQNSAADERERMSGQTESAEQ 418 Query: 399 SEATHYQ----LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 + Q+H YI++Q GL I+DQHAA ER+ +E R+ Sbjct: 419 EQVCVNNDRLPPLYPIGQMHGTYILAQNERGLYIIDQHAAQERIKYEYFREKVGEVTNEV 478 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL P E LI H E+L + G+ E FG N +R P+ K +++ Sbjct: 479 QELLVPLTFHYPADEYVLIDAHREELAKCGVFLEPFGHNTFIVRSHPSWFPKGEEAEIIE 538 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 ++I ++I+ ++ E M+C SI++ ++ E+ LL + K + C Sbjct: 539 EMIQQVIEMKKVD-IKQLREKAAILMSCKRSIKANEYLRDDEIFALLESLRKTTDPFTCP 597 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRP I ++EK+F R Sbjct: 598 HGRPIIIHFSTYELEKMFKR 617 >gi|239946682|ref|ZP_04698435.1| DNA mismatch repair protein MutL [Rickettsia endosymbiont of Ixodes scapularis] gi|239920958|gb|EER20982.1| DNA mismatch repair protein MutL [Rickettsia endosymbiont of Ixodes scapularis] Length = 610 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 246/610 (40%), Positives = 370/610 (60%), Gaps = 16/610 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE IN+IAAGE+IERP+ +KEL+EN++DA S++++ ++ GK+ I+D+G Sbjct: 1 MTIKFLSESTINRIAAGEVIERPASVVKELVENAVDAGSTKIDIILERAGKNLIIISDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK+ + DF NIHTFGFRGEALPSI +S + + S+ + Sbjct: 61 IGMTDKELEIAVERHTTSKLDESDFLNIHTFGFRGEALPSIATISKMLITSKKQGADKAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G V N GT +E+RDLFF PARL FL++++ E DV++++ +A+ Sbjct: 121 QIKLIGGNEKQVTISVHNEGTKIEIRDLFFATPARLKFLRADKTELAATVDVVKKITLAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 PK+SF+ + N K+ Q+ + N +RI VIG+DFI NA ++ K+ + ++ GYT Sbjct: 181 PKISFSLTHDGKNLLKLKRQNKDAETNLKQRIIDVIGDDFIKNAAYIDFKTPDFSICGYT 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 IPT+NR ++ ++FIN R V+DK + +R AY + + RYP+ + L++DP+ VDV Sbjct: 241 SIPTYNRASSEDQFLFINNRPVKDKLLQVALRVAYQDYLARDRYPLCAIFLQVDPQLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF +P +RN +I++I+ A+ K TS+ ++ + F K Sbjct: 301 NVHPAKVEVRFHDPNYVRNLLIEAIKNALTNKSHVTSTTIATDALELFKNPLVNKQPQIS 360 Query: 358 YA----TSLTNTQEKLFLQENRLSTN-------DLLPSDDPTYSEDNDPVEESEATHYQL 406 A + + + N++ N D LP +N E + Sbjct: 361 KAINVNSKSADYRPTTHSTLNKVPQNHVCQKLIDTLPHAKIEQEVENRIEHEQQTRKQYK 420 Query: 407 -GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 G A Q+H YIISQT D +VI DQH AHERL +EK++ + ++ Q LL PEI++L Sbjct: 421 LGAAKTQLHTTYIISQTEDSIVITDQHVAHERLGYEKIKDYLKTEELIKQRLLIPEIVEL 480 Query: 466 L-EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 E + + EH E L++LG+ E+FG +I + EIP IL N+ +L++D+ D + D Sbjct: 481 PNEKKADCLYEHREKLYKLGLTLEKFGEKSIIVTEIPNILGDVNVQKLIQDLADHLSDFG 540 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 L + IE++ T AC+ SIR+G+K+ EMN LLR+ME P S QCNHGRPT+I+LK Sbjct: 541 ENIALTELIEHVTETYACHYSIRAGQKLSVDEMNALLRQMENTPFSGQCNHGRPTYIELK 600 Query: 585 LSDIEKLFGR 594 L DIE+LFGR Sbjct: 601 LKDIERLFGR 610 >gi|222110664|ref|YP_002552928.1| DNA mismatch repair protein Mutl [Acidovorax ebreus TPSY] gi|221730108|gb|ACM32928.1| DNA mismatch repair protein MutL [Acidovorax ebreus TPSY] Length = 635 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 198/617 (32%), Positives = 320/617 (51%), Gaps = 27/617 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ ++EL++N+LD+ ++ + + GG + D+G Sbjct: 20 PIRDLPDELISQIAAGEVVERPASVVRELVDNALDSGATAITVRLLAGGVRLISVEDDGC 79 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A++RH TSKI++ D + T GFRGEAL +I +VS L+SRP + Sbjct: 80 GIPQDELPVALRRHATSKITNLHDLETVATMGFRGEALAAIASVSETALLSRPQAQASAF 139 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + +I GT VEV++LFF+ PAR FLKS+ E + +RR A+A Sbjct: 140 LLDARSGEIRPAARSH---GTTVEVKELFFSTPARRKFLKSDATELAHCVEAVRRHALAR 196 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN------FPERISQVIGEDFINNAVELNEKSNEITL 233 P V F + G R++ V+GEDF+ +V + ++ +T+ Sbjct: 197 PDVGFAIWHEGKLLEQWRATFVPGAGQAQDALARRLADVLGEDFVAQSVAVLHRAGPVTV 256 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G G+P R A+ Y ++NGR V+DK + R+AY + + + PV L +EIDP Sbjct: 257 TGRAGLPDAARARADHQYCYVNGRFVRDKVLTHAARSAYEDVLHGQKQPVYALYVEIDPA 316 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS--SVLSKKMISSFHQDNAP 351 +VDVNVHP K +RFR+ + + +++ A+ + S ++ + D P Sbjct: 317 RVDVNVHPTKIEVRFRDSREVHQAVRHAVENALAAPRAAALAPSFVAASALPESDSDRKP 376 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL----- 406 + A + +E+ + + L + V E + Sbjct: 377 SEPFTRKAQAAIKFEERPGHKVSDLQALWQPTPSAAPTATPAQGVAEPPPRDWATPAPPA 436 Query: 407 --------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-KITSQTL 457 G A AQIH YI+++ G+V+VD HAAHER+++E+++ +S +I SQ L Sbjct: 437 AEEPAWPLGRAVAQIHGVYILAENAQGMVVVDMHAAHERIVYERLKAQVDSGARIASQPL 496 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P E A E E L LG++ F P +A+R +P L++ + +L R ++ Sbjct: 497 LIPATFAATAQEVATAEECAEVLATLGLEVVPFSPKTLAVRAVPTSLAQGDAVELARSVL 556 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 E+ T +Q ILATMAC+G++R+ RK+ EMN LLR+M S QCNHGR Sbjct: 557 AELAAHDATTVVQRARNEILATMACHGAVRANRKLTLDEMNALLRQMGTTDRSDQCNHGR 616 Query: 578 PTFIKLKLSDIEKLFGR 594 PT+ +L + +++ LF R Sbjct: 617 PTWRQLTMKELDALFLR 633 >gi|212639350|ref|YP_002315870.1| DNA mismatch repair protein [Anoxybacillus flavithermus WK1] gi|226723025|sp|B7GIA3|MUTL_ANOFW RecName: Full=DNA mismatch repair protein mutL gi|212560830|gb|ACJ33885.1| DNA mismatch repair enzyme (predicted ATPase) [Anoxybacillus flavithermus WK1] Length = 608 Score = 525 bits (1351), Expect = e-146, Method: Composition-based stats. Identities = 177/609 (29%), Positives = 305/609 (50%), Gaps = 21/609 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL + + N+IAAGE++ERP+ +KEL+EN++DA S+ +E + G + ++ DNG Sbjct: 3 KIRKLDDALANKIAAGEVVERPASVVKELVENAIDAHSTIIEVELEEAGLAKIRVVDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G E+ +A +RH TSKI D D I T GFRGEALPSI +VSHL L + G Sbjct: 63 GFEEEDCFLAFERHATSKIKDEADLFRIRTLGFRGEALPSIASVSHLELKTST-GEGPGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G ++ + GT + V LFF PARL ++K+ E + DVI R+A+A+ Sbjct: 122 WLVLKGGELVQHGRTSSRKGTDITVSHLFFNTPARLKYMKTIHTELGHVVDVINRLALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF + ++ + + NG+ + ++ + G D + ++ ++ + T+ GY + Sbjct: 182 PHISFRLTHNGK---QLFYTNGNGDVRQVLAAIYGLDVAKKMIAIHAETLDFTIDGYVAL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR +++ + I Y +P+GR+P+ L + +DP +DVNV Sbjct: 239 PEVTRASRNYMTTIVNGRYIKNYSLYKAIEEGYHTLLPIGRHPITFLNIMMDPLLIDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +RF T + + Q+I+++ KK + + + Q H+ K + Sbjct: 299 HPAKLEVRFSKETELNELVQQTIRQSFQKKTLIPEVTAPRVEKTKAEQQTFSFEHIVKES 358 Query: 360 TSLTN------------TQEKLFLQENRLS--TNDLLPSDDPTYSEDNDPVEESEATHYQ 405 +++ T+E++ L+++ D+ D + E + Sbjct: 359 NTMSPRVTEIHRDQEKKTEERIVLEKSDEHVRDQDVTLLDVESVVPSEHVTGEMDQERIP 418 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 Q+H YI++Q +GL I+DQHAA ER+ +E R+ + Q LL P + Sbjct: 419 PLYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREKLATVTNELQPLLIPLTLTY 478 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 E LI + + L G+ E FG N+ +R P K ++ ++I ++++ Sbjct: 479 SSSEYLLIESYRDQLAACGVFLEPFGHNSFIVRSHPQWFPKGEEVAIIEEMIKQVLEMKK 538 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 ++ E M+C SI++ + +++ E+ LL + K + C HGRP I Sbjct: 539 VD-MKQLREKAAIMMSCKQSIKANQFLRNDEIFALLESLRKTSDPFTCPHGRPIIIHFST 597 Query: 586 SDIEKLFGR 594 ++EK+F R Sbjct: 598 YELEKMFKR 606 >gi|332867099|ref|ZP_08437396.1| DNA mismatch repair protein [Acinetobacter baumannii 6013113] gi|332734292|gb|EGJ65421.1| DNA mismatch repair protein [Acinetobacter baumannii 6013113] Length = 650 Score = 525 bits (1351), Expect = e-146, Method: Composition-based stats. Identities = 210/639 (32%), Positives = 343/639 (53%), Gaps = 46/639 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERPS +KEL+ENS+DA ++ + IA GG + +I DNG Sbjct: 10 RIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIVRIAQGGSTLIEIIDNGH 69 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+AV RH TSKI ++D I + GFRGEAL SI AVS LTL S ++ G Sbjct: 70 GIHPDDLPLAVMRHATSKIKTAEDLHAIVSLGFRGEALASIAAVSRLTLTSSQDESGIGH 129 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ V+ VA GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 130 QVEVNGTAFDHQQVQAVAAQKGTHIRVQDLFFNVPARRKFLKKPTTEFGHIKEIVRRLAL 189 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + F + R + + +R+ Q++G+ F+ NA ++ +S + L G+ Sbjct: 190 THFDIRFVLEHNDNIRINLPIADSGELRFQRVQQLLGQQFVQNAYWIDAESINMRLSGWL 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP +DV Sbjct: 250 GHPSDARAQADLQYVYVNGRIVKDKTISHALRMAYDGILHGHQHSSYLLFLEVDPENIDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS----KKMISSFHQDNAP-- 351 NVHP K IRF N + F+ ++ + + +++ + +SF Q Sbjct: 310 NVHPTKHEIRFLNQREVHEFVRHYAKETLAQFQTASADLAQAMKADDTQASFVQSQPKYQ 369 Query: 352 -----------------KTHLPKYATSL-----TNTQEKLFLQENRLSTN---------- 379 K+ + +T L + + + E N Sbjct: 370 EQFTLHRTDQAVDTTLDKSSSYQPSTELLTDFNNSRPQAVHYAEQTPKYNGSAQLNNALK 429 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 L +S D + ++ + LGIA AQ+H YI++Q T+GL+IVD HAAHE Sbjct: 430 TYLAPLRDQPTNFSVDENIESVAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHE 489 Query: 437 RLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 R++ ++M+ ++ + TSQ LL P++I + + + + L RLG++ + +G + Sbjct: 490 RILLQQMKNAWDKPEFWTSQQLLIPKVISISRMQAIRVEDLKPQLERLGLEIDLYGDEQV 549 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 +R +PAIL K + L+ ++++++ + L + + +LA MAC+G++R+ R++ Sbjct: 550 IVRGVPAILQKADFENLIPELLNDLDPNDEAQGLLQKRDELLAGMACHGAVRAHRQLSLS 609 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME+ +SQCNHGRPT+ LS ++KLF R Sbjct: 610 EMNALLRQMEQTEFASQCNHGRPTWRAFPLSQLDKLFAR 648 >gi|254670262|emb|CBA05521.1| DNA mismatch repair protein MutL [Neisseria meningitidis alpha153] Length = 658 Score = 525 bits (1351), Expect = e-146, Method: Composition-based stats. Identities = 210/658 (31%), Positives = 339/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ + GGG ++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELDGGGIRLIHVSDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR ++ Sbjct: 63 GIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQEDSSHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAATHPVGTTIEAAELFFNTPARRKFLKSENTEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ S + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGSGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP K+ IRFR+ + + ++ KA+ Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRANLTESVGNAGEVLHDITGVVSTPMPSEN 358 Query: 329 -----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 ++ K + ++ KT Y ++ Q L L+E+R + N Sbjct: 359 DSENLFDSVSNYPTGNKSDTHNAFGSSGKTAPMPYQSAYAPQQRSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATHYQL---------------GIACAQIHQNY 417 T + + E+ A G A AQ+ Y Sbjct: 419 LYKKTDDIDLELSRFEQARFGNMPSETPAPQTDTPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPVTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 + L G++ G N +A+R +PA+L K ++ L +D++ E+ ++ T+++ I Sbjct: 539 ADALAGFGLELSDMGGNTLAVRTVPAMLGKADVVSLAKDVLGELAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSVRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|169795562|ref|YP_001713355.1| enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA [Acinetobacter baumannii AYE] gi|213158497|ref|YP_002319795.1| DNA mismatch repair protein MutL [Acinetobacter baumannii AB0057] gi|215483049|ref|YP_002325254.1| DNA mismatch repair protein MutL family protein [Acinetobacter baumannii AB307-0294] gi|301347865|ref|ZP_07228606.1| DNA mismatch repair protein MutL family protein [Acinetobacter baumannii AB056] gi|301510580|ref|ZP_07235817.1| DNA mismatch repair protein MutL family protein [Acinetobacter baumannii AB058] gi|301596368|ref|ZP_07241376.1| DNA mismatch repair protein MutL family protein [Acinetobacter baumannii AB059] gi|332850620|ref|ZP_08432867.1| DNA mismatch repair protein [Acinetobacter baumannii 6013150] gi|169148489|emb|CAM86355.1| enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA [Acinetobacter baumannii AYE] gi|213057657|gb|ACJ42559.1| DNA mismatch repair protein MutL [Acinetobacter baumannii AB0057] gi|213988182|gb|ACJ58481.1| DNA mismatch repair protein MutL family protein [Acinetobacter baumannii AB307-0294] gi|332730457|gb|EGJ61773.1| DNA mismatch repair protein [Acinetobacter baumannii 6013150] Length = 650 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 210/639 (32%), Positives = 343/639 (53%), Gaps = 46/639 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERPS +KEL+ENS+DA ++ + IA GG + +I DNG Sbjct: 10 RIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIVRIAQGGSTLIEIIDNGH 69 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+AV RH TSKI ++D I + GFRGEAL SI AVS LTL S ++ G Sbjct: 70 GIHPDDLPLAVMRHATSKIKTAEDLHAIVSLGFRGEALASIAAVSRLTLTSSQDESGIGH 129 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ V+ VA GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 130 QVEVNGTAFDHQQVQAVAAQKGTHIRVQDLFFNVPARRKFLKKPTTEFGHIEEIVRRLAL 189 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + F + R + + +R+ Q++G+ F+ NA ++ +S + L G+ Sbjct: 190 THFDIRFVLEHNDNIRINLPIADSGELRFQRVQQLLGQQFVQNAYWIDAESINMRLSGWL 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP +DV Sbjct: 250 GHPSDARAQADLQYVYVNGRIVKDKTISHALRMAYDGILHGHQHSSYLLFLEVDPENIDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS----KKMISSFHQDNAP-- 351 NVHP K IRF N + F+ ++ + + +++ + +SF Q Sbjct: 310 NVHPTKHEIRFLNQREVHEFVRHYAKETLAQFQTASADLAQAMKADDTQASFVQSQPKYQ 369 Query: 352 -----------------KTHLPKYATSL-----TNTQEKLFLQENRLSTN---------- 379 K+ + +T L + + + E N Sbjct: 370 EQFTLHRTDQAVDTTLDKSSSYQPSTELLTDFNNSRPQAVHYAEQTPKYNGSAQLNNALK 429 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 L +S D + ++ + LGIA AQ+H YI++Q T+GL+IVD HAAHE Sbjct: 430 TYLAPLRDQPTNFSVDENIESVAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHE 489 Query: 437 RLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 R++ ++M+ ++ + TSQ LL P++I + + + + L RLG++ + +G + Sbjct: 490 RILLQQMKNAWDKPEFWTSQQLLIPKVISISRMQAIRVEDLKPQLERLGLEIDLYGDEQV 549 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 +R +PAIL K + L+ ++++++ + L + + +LA MAC+G++R+ R++ Sbjct: 550 IVRGVPAILQKADFENLIPELLNDLDPNDEAQGLLQKRDELLAGMACHGAVRAHRQLSLS 609 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME+ +SQCNHGRPT+ LS ++KLF R Sbjct: 610 EMNALLRQMEQTEFASQCNHGRPTWRAFPLSQLDKLFAR 648 >gi|103487111|ref|YP_616672.1| DNA mismatch repair protein [Sphingopyxis alaskensis RB2256] gi|123078316|sp|Q1GSN3|MUTL_SPHAL RecName: Full=DNA mismatch repair protein mutL gi|98977188|gb|ABF53339.1| DNA mismatch repair protein MutL [Sphingopyxis alaskensis RB2256] Length = 603 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 228/606 (37%), Positives = 354/606 (58%), Gaps = 16/606 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E ++N+IAAGE++ERP+ A+KEL+EN++DA ++R+ IA GG + ++ D+G Sbjct: 1 MSIRRLPETLVNRIAAGEVVERPAAALKELVENAIDAGATRIAVRIAEGGIARLEVEDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT+ ++ +A++RH TSK+ DD + T GFRGEALPSI +V+ LTL SR + G Sbjct: 61 CGMTAADMVLALERHATSKLPDDAIEAVTTLGFRGEALPSIASVARLTLESRTAGGD-GW 119 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + + + P A+ GT V V LF +PAR FL+S + E DV+RR+A+A Sbjct: 120 RRVVDNGAVVAEGPAALGQGTRVIVEHLFARVPARRKFLRSARSEYAACLDVVRRLAMAR 179 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V FT + + R++ + D N++ ++ E+ L G + Sbjct: 180 PDVGFTLEHDGRRVLDVQ---GGQDRVGRVAALTSRDLAANSIGVDLDRGEVHLGGVISL 236 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT+NRG A+ Y+F+NGR V+D+ ++ +R AYA+ + R+PVV L L++ +VDVNV Sbjct: 237 PTYNRGIADHQYLFVNGRPVKDRLLVGALRGAYADLLARDRHPVVALFLDVPTGEVDVNV 296 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKTHLPKY 358 HPAK+ +RFR+P +IR I+ +++A+++ G + ++ ++++ Q+ AP Sbjct: 297 HPAKTEVRFRDPQLIRGMIVGGLRRALDEHGFRSVQKPAEAALAAWQQEPVAPPPATGFL 356 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDP----------TYSEDNDPVEESEATHYQLGI 408 F E L D+ D + A + LGI Sbjct: 357 FDRRAGAAVHPFAAEVSLPAADVARVYDRLMPFTAPAPLAGRAEVAATPPPAAEAHPLGI 416 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 A QI + YI+++ DGLVIVDQHAAHERL+ E +++ + SQ LL PE+++L E Sbjct: 417 ARGQIAKTYIVAEAEDGLVIVDQHAAHERLVLETLKRGMAGQAVPSQGLLIPEVVELDEP 476 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 C + + L LG++ ERFGP A+ +R PA+L + +L+ DI D++ Sbjct: 477 ACDRLEAAADGLAALGVELERFGPGAVMVRATPAMLGAIDCHRLVTDIADDLAGYDAALG 536 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 L +R+E + ATMAC+GS+R+GR + EMN LLR+ME P+S QCNHGRPT++KL + D+ Sbjct: 537 LNERLELVAATMACHGSVRAGRTLSVAEMNALLRQMEVTPHSGQCNHGRPTWVKLAMGDV 596 Query: 589 EKLFGR 594 E+LFGR Sbjct: 597 ERLFGR 602 >gi|260549350|ref|ZP_05823569.1| DNA mismatch repair ATPase [Acinetobacter sp. RUH2624] gi|260407459|gb|EEX00933.1| DNA mismatch repair ATPase [Acinetobacter sp. RUH2624] Length = 651 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 209/640 (32%), Positives = 343/640 (53%), Gaps = 47/640 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERPS +KEL+ENS+DA ++ + IA GG + +I DNG Sbjct: 10 RIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIVRIAQGGSTLIEIIDNGH 69 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+AV RH TSKI ++D I + GFRGEAL SI AVS LTL S ++ G Sbjct: 70 GIHPDDLPLAVMRHATSKIKTAEDLHAIVSLGFRGEALASIAAVSRLTLTSSQDESGIGH 129 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ V+ VA GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 130 QVEVNGTAFDHQQVQAVAAQKGTHIRVQDLFFNVPARRKFLKKPTTEFGHIEEIVRRLAL 189 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + F + R + + +R+ Q++G+ F+ NA ++ +S + L G+ Sbjct: 190 THFDIRFVLEHNDNIRINLPIADSGELRFQRVQQLLGQQFVQNAYWIDAESINMRLSGWL 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP +DV Sbjct: 250 GHPSDARAQADLQYVYVNGRIVKDKTISHALRMAYDGILHGHQHSSYLLFLEVDPENIDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS------------------VLSK 339 NVHP K IRF N + F+ ++ + + +++ + Sbjct: 310 NVHPTKHEIRFLNQREVHEFVRHYAKETLAQFQTASADLAQAMKVDDTQNLSVQPQPKYQ 369 Query: 340 KMISSFHQDNAPKTHLPKYATSLTNTQ----------EKLFLQENRLSTNDLLP------ 383 + + + A T L K +S +T+ + + E N Sbjct: 370 EQFTLHRTEQAVDTTLDKPNSSQPSTELLTDFNNSRPQAVHYAEQTPKYNGSAQLNNALK 429 Query: 384 --------SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 +S D + ++ + LGIA AQ+H YI++Q T+GL+IVD HAAH Sbjct: 430 TYLAPLRDQPATNFSVDENVEPVAKIDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAH 489 Query: 436 ERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA 494 ER++ ++M+ ++ + TSQ LL P++I + + + + L RLG++ + +G Sbjct: 490 ERILLQQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKSQLERLGLEIDLYGDEQ 549 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQS 554 + +R +PAIL K + L+ ++++++ + L + + +LA MAC+G++R+ R++ Sbjct: 550 VIVRGVPAILQKADFENLIPELLNDLDPNDEAQGLLQKRDELLAGMACHGAVRAHRQLSL 609 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME+ +SQCNHGRPT+ LS ++KLF R Sbjct: 610 SEMNALLRQMEQTEFASQCNHGRPTWRAFPLSQLDKLFAR 649 >gi|167626478|ref|YP_001676978.1| DNA mismatch repair enzyme with ATPase activity [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596479|gb|ABZ86477.1| DNA mismatch repair enzyme with ATPase activity [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 601 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 200/596 (33%), Positives = 325/596 (54%), Gaps = 8/596 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + NQIAAGE+IERPS +KELIENS+DA ++ + I GGKS +I DNG Sbjct: 9 QIRLLPEDLANQIAAGEVIERPSSVVKELIENSIDAGATAITIEIQEGGKSLIRIRDNGK 68 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ H TSK+ ++ ++ + GFRGEAL SI +VS L ++S+ + Sbjct: 69 GIVYDDLRLALAPHATSKVYTLEELESVASMGFRGEALASIASVSKLKIISKHQDYDDAW 128 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ P A GT +EV +LF+ PAR FLK + E I+D++++ + Y Sbjct: 129 QINNETREV---TPAAHVTGTTIEVSELFYNTPARRKFLKKDNTEFLHISDLLKKYMLCY 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++F + R+ + DFI NA+ ++++ + L G+ Sbjct: 186 FGIAFRLIHNGKEVKDLLLAEDAQLKYNRVLDLYSRDFIENAIYIDKEVGDAHLWGWVAS 245 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P FNR A+ +INGR ++DK + I+ AY + + RYP +L L++D ++VDVNV Sbjct: 246 PRFNRARADMQSFYINGRIIKDKIVTHAIKNAYKDVMYGNRYPAFLLYLDMDYKEVDVNV 305 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAKS +RFRN I +F+ ++ KAI + S +++ + L Sbjct: 306 HPAKSEVRFRNQKFIYDFLFGTVNKAITTSADIEIEISSFSENNTYQESKGTNNPLNIGN 365 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 SL + E + + S D S+ T ++N+ + LG A QIH YI+ Sbjct: 366 MSLDISIEDEKDESSNTSLLDKYFSNQTT--QENEIHISQKTKSSGLGQAICQIHGIYIL 423 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL-TPEIIDLLEGECALIMEHDE 478 SQ DG+V+VD HAAHER+++E+M++ +++ + L P L A I E+ E Sbjct: 424 SQVEDGIVLVDMHAAHERILYEEMKKTWHADTAKFKQNLLMPLTCRLSSNIVATIDENLE 483 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +LG + +A+ +R P + K++ L+ ++ E+ S T +++ + +ILA Sbjct: 484 VFEKLGFEISVVADDAVLVRSTPIYVKDKDVQNLISNVATELTSSGKTKSVEFYLNHILA 543 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T++C+ ++R+ K+ EMN LLR+ME NS QCNHGRPT++KL + ++ F R Sbjct: 544 TVSCHAAVRANDKLGIPEMNHLLRQMETVENSGQCNHGRPTWVKLNFAQLDNFFLR 599 >gi|241668914|ref|ZP_04756492.1| DNA mismatch repair enzyme with ATPase activity [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877446|ref|ZP_05250156.1| DNA mismatch repair protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843467|gb|EET21881.1| DNA mismatch repair protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 601 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 198/596 (33%), Positives = 323/596 (54%), Gaps = 8/596 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + NQIAAGE+IERPS +KELIENS+DA ++ + I GGKS +I DNG Sbjct: 9 QIRLLPEDLANQIAAGEVIERPSSVVKELIENSIDAGATAITIEIQEGGKSLIRIRDNGK 68 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ H TSK+ ++ ++ + GFRGEAL SI +VS L ++S+ + Sbjct: 69 GIVYDDLRLALAPHATSKVYTLEELESVASMGFRGEALASIASVSKLKIISKHQDYDDAW 128 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI +++ V GT +EV +LF+ PAR FLK + E I+D++++ + Y Sbjct: 129 QINNETREVTPAAHV---TGTTIEVSELFYNTPARRKFLKKDNTEFLHISDLLKKYMLCY 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++F + R+ + DFI NA+ ++++ + L G+ Sbjct: 186 FSIAFRLIHNGKEVKDLLSAEDAQLKYNRVLDLYSRDFIENAIYIDKEVGDAHLWGWVAS 245 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P FNR A+ +INGR ++DK + I+ AY + + RYP +L L++D ++VDVNV Sbjct: 246 PRFNRARADMQSFYINGRIIKDKIVTHAIKNAYKDVMYGNRYPAFLLYLDMDYKEVDVNV 305 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAKS +RFRN I +F+ ++ KAI S + + + L Sbjct: 306 HPAKSEVRFRNQKFIYDFLFGTVNKAITTSADIEIETSSYSESNIYQESKGTNNPLNIGN 365 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 SL + E + + S D S+ +++N+ + LG A QIH YI+ Sbjct: 366 MSLDISIEDEKDESSSTSLLDKYFSNQT--NQENEIHISQKPKASGLGQAICQIHGIYIL 423 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL-TPEIIDLLEGECALIMEHDE 478 SQ DG+V+VD HAAHER+++E+M++ +++ + L P L A I E+ E Sbjct: 424 SQVEDGVVLVDMHAAHERILYEEMKKTWHADAAKFKQNLLMPLTCRLSSNIVATIDENLE 483 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +LG + +A+ +R P + K++ L+ ++ E+ S T +++ + +ILA Sbjct: 484 VFEKLGFEISVVADDAVLVRSTPIYVKDKDVQNLISNVATELTSSGKTKSVEFYLNHILA 543 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T++C+ ++R+ K+ EMN LLR+ME NS QCNHGRPT++KL + ++ F R Sbjct: 544 TVSCHAAVRANDKLNIQEMNHLLRQMETVENSGQCNHGRPTWVKLNFAQLDNFFLR 599 >gi|325142632|gb|EGC65023.1| DNA mismatch repair protein MutL [Neisseria meningitidis 961-5945] Length = 658 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 214/658 (32%), Positives = 342/658 (51%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + ++NQIAAGE++ERP+ A+KE++ENS+DA ++ ++ +AGGG +++DNG Sbjct: 3 RIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAIDVELAGGGIRLIRVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A+ RH TSKI +D ++ + GFRGE L SI +VS LTL SR + Sbjct: 63 GIHPDDIKLALHRHATSKIKTLNDLEHVASMGFRGEGLASIASVSRLTLTSRQDGSAHAT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ K+SS A GT +E +LFF PAR FLKSE E ++ R+A+A+ Sbjct: 123 QVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKFLKSEATEYAHCATMLERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ +K+ QS ERI+ ++G+DF ++E++ + + L G Sbjct: 183 PHIAFSLKRDGKQVFKLPAQS----LHERIAAIVGDDFQTASLEIDSGNGALRLYGAIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P VL L++ P VDVNV Sbjct: 239 PTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--------------ISTSSVLSKKMISSF 345 HP K+ IRFR+ + + ++ KA+ + V M S Sbjct: 299 HPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTESVGNAGEVLHDITGVTPAPMPSEN 358 Query: 346 HQDN----------------------APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 + +N + KT Y + Q L L+E+R + N Sbjct: 359 NSENLFDRASNYPTGNKPDTRNAFGASGKTAPMPYQAARAPQQRSLSLRESRAAMNTYAE 418 Query: 384 SDDPT-----------YSEDNDPVEESEATH---------------YQLGIACAQIHQNY 417 T + + E+ LG A AQ+ Y Sbjct: 419 LYKKTDDIDLELNRLEQARFGNMPSETPTPKTDAPLSDGIPSQSELPPLGFAIAQLLGIY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEH 476 I++Q D L+++D HAA ER+ +EKM++ + SQ LL P ECA + +H Sbjct: 479 ILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGRLQSQRLLIPVTFAASHEECAALADH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 + L G++ G N +A+R +PA+L K ++ L +D++ E+ ++ T+++ I Sbjct: 539 ADALAGFGLELSDMGGNTLAVRTVPAMLGKADVVSLAKDVLGELAQVGSSQTIEEHENRI 598 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LATM+C+GS+R+GR++ EMN LLR+ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 599 LATMSCHGSVRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTLKELDALFLR 656 >gi|15893284|ref|NP_360998.1| DNA mismatch repair protein [Rickettsia conorii str. Malish 7] gi|20455107|sp|Q92FW6|MUTL_RICCN RecName: Full=DNA mismatch repair protein mutL gi|15620505|gb|AAL03899.1| DNA mismatch repair protein MutL [Rickettsia conorii str. Malish 7] Length = 610 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 247/610 (40%), Positives = 375/610 (61%), Gaps = 16/610 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE IN+IAAGE+IERP+ +KEL+EN++DA S++++ ++ GK+ I+D+G Sbjct: 1 MTIKFLSESTINRIAAGEVIERPASVVKELVENAVDASSTKIDIILERAGKNLIIISDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK + DF NI+TFGFRGEALPSI A+S + + S+ + Sbjct: 61 IGMTDKELEIAVERHTTSKFDESDFLNINTFGFRGEALPSIAAISKMLITSKKRDADKAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G V N GT +E+RDLFF PARL FL++++ E DV++++A+A+ Sbjct: 121 QIKLIGGNEKQVTISVHNEGTKIEIRDLFFATPARLKFLRADKTELTATVDVVKKIALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 PK+SF+ + N K+ Q+ + N +RI VIG+DFI NA ++ K+ + ++ GYT Sbjct: 181 PKISFSLTHDGKNLLKLKGQNKDAETNLKQRIIDVIGDDFIKNAAYIDFKTPDFSICGYT 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 PT+NR ++ ++FIN R V+DK + +R AY + + RYP+ + L+IDP+ VDV Sbjct: 241 SSPTYNRASSEDQFLFINNRPVKDKLLQVALRVAYQDYLARDRYPICAIFLQIDPQLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD----NAPKT 353 NVHPAK+ +RF +P +RN +I++I+ A+ K TS+ ++ ++ F +P + Sbjct: 301 NVHPAKAEVRFHDPNYVRNLLIEAIKNALTNKSHVTSTTIASDVLELFKNPLVNKQSPVS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN-------DLLPSDDPTYSEDNDPVEESEATHYQL 406 + + + + N + N D L +N E + Sbjct: 361 KVINVNSKSADYRPTTHSTLNTVPQNHVCQKLIDTLSHAKIEQEVENRIEHEQQTRKQYK 420 Query: 407 -GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 G A AQ+H YIISQT D +VI DQHAAHERL +EK++ + ++ Q LL PEI++L Sbjct: 421 LGAAKAQLHTTYIISQTEDSIVITDQHAAHERLGYEKIKDYLKTEELIKQRLLIPEIVEL 480 Query: 466 L-EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 E + + +H E L++LG+ E+FG +I + EIP IL N+ +L++D+ D + D Sbjct: 481 PNEKKADCLYDHREKLYKLGLTLEKFGEKSIIVTEIPNILGDVNVQKLIQDLADHLSDFG 540 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 L + IE++ T AC+ SIR+GRK+ + EMN LLR+ME P S QCNHGRPT+I+LK Sbjct: 541 KNIALTELIEHVTETYACHYSIRAGRKLSADEMNALLRQMENTPLSGQCNHGRPTYIELK 600 Query: 585 LSDIEKLFGR 594 L DIE+LFGR Sbjct: 601 LKDIERLFGR 610 >gi|294650010|ref|ZP_06727398.1| enzyme in methyl-directed mismatch repair [Acinetobacter haemolyticus ATCC 19194] gi|292824103|gb|EFF82918.1| enzyme in methyl-directed mismatch repair [Acinetobacter haemolyticus ATCC 19194] Length = 657 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 209/648 (32%), Positives = 340/648 (52%), Gaps = 55/648 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERPS +KEL+ENS+DA ++ + +A GG + +I DNG Sbjct: 8 RIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIIRVAQGGATLIEIIDNGN 67 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+AV RH TSKI +DD I + GFRGEAL SI AVS LTL S + G Sbjct: 68 GIHPEDLPLAVMRHATSKIQTADDLHAIVSLGFRGEALASIAAVSRLTLTSSQDEQGVGY 127 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ ++ VA GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 128 QVEVNGTAFDHQQIQAVAAQKGTHIRVQDLFFNVPARRKFLKKPSTEFGHIEEIVRRLAL 187 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + ++ F + R + + +R+ Q++G+ FI NA ++ +S + L G+ Sbjct: 188 THFEIRFVLEHNDNIRLNLPVADSGELRYQRVQQLLGQQFIQNAYWIDAESINMRLSGWL 247 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP +DV Sbjct: 248 GHPSDARAQADLQYVYVNGRIVKDKTISHALRMAYEGILHGHQHSSYLLFLEVDPENIDV 307 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K IRF N + F+ + +++ +++ + + A PK Sbjct: 308 NVHPTKHEIRFLNQREVHEFVRHYAKAMLSQFQTASADLAQAMKVDETDHQAAQYQPQPK 367 Query: 358 YATSL---------------TNTQEKLFLQENRLSTNDLLPSDDPTYSEDND-------- 394 Y T+ +LF + N+ + + + + Sbjct: 368 YQEQFNLHKAVVTEPLSDQQTDISTELFTEFNQSRPQAVHYTSGQSQQPRYNGSGQLNNA 427 Query: 395 ---------------------------PVEESEATHYQLGIACAQIHQNYIISQTTDGLV 427 V +S + LGIA AQ+H YI++Q T+GL+ Sbjct: 428 LKTYLAPLRESDVPTTAFDSGNDTVDRDVAQSRVDEFPLGIAIAQLHGIYILAQNTEGLI 487 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKIT-SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 IVD HAAHER++ ++M+ ++ + SQ LL P+++ + + I E L RLG++ Sbjct: 488 IVDMHAAHERILLQQMKAAWDKPEFWVSQQLLIPKVVPITRMQATRIEELQPQLQRLGLE 547 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 +++G + +R +PAIL K + L+ ++++++ + L + + +LA MAC+G++ Sbjct: 548 IDQYGDEQVIVRGVPAILHKADFSNLIPELLNDLDPNDEARGLLQKRDELLAGMACHGAV 607 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R+ R++ EMN LLR+ME+ +SQCNHGRPT+ L ++KLF R Sbjct: 608 RAHRQLSLSEMNALLRQMEQTEFASQCNHGRPTWRAFPLHQLDKLFAR 655 >gi|163846708|ref|YP_001634752.1| DNA mismatch repair protein MutL [Chloroflexus aurantiacus J-10-fl] gi|222524517|ref|YP_002568988.1| DNA mismatch repair protein MutL [Chloroflexus sp. Y-400-fl] gi|163667997|gb|ABY34363.1| DNA mismatch repair protein MutL [Chloroflexus aurantiacus J-10-fl] gi|222448396|gb|ACM52662.1| DNA mismatch repair protein MutL [Chloroflexus sp. Y-400-fl] Length = 624 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 177/627 (28%), Positives = 311/627 (49%), Gaps = 38/627 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L E I QIAAGE++ERP+ +KEL+EN++DA + R+ + GGG ++ D+G Sbjct: 1 MPIRLLDETIAAQIAAGEVVERPASVVKELLENAIDAGAQRIVIEVRGGGLREIRVQDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++EI +A RH TSK+ +DD I T GFRGEALPSI +V+ + +SR G Sbjct: 61 CGIPADEIELAFARHATSKLQSADDLWAIRTLGFRGEALPSIASVAQVICISRVADAELG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ I+G ++ S P GT + VR+LF+ P R +L+SE ET I+ ++++ A+A Sbjct: 121 VELRIAGGEVQSRLPCGCPVGTTITVRNLFYNTPVRREYLRSEATETGAISAIVQQYALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK----SNEITLQ 234 YP+VSF+ + S +G+ + ++ G + + + + + + Sbjct: 181 YPEVSFSLLIDGRMALQ---TSGDGDLRTVVVELYGLEVGRALLPVQAEAGVDETWVAVN 237 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDK-FILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G P R + N +F N R +Q + + + + AY + GR+P+ +L + + P Sbjct: 238 GLISPPELTRSSRNYLSLFANRRALQPRGALAAVVENAYHTMLMKGRFPIAILDVRVHPA 297 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD----- 348 +DVNVHP KS ++FR + + + ++I+ A+ + + + + Sbjct: 298 AIDVNVHPTKSEVKFRYAAHVHSVLGRAIRDALLRGADIPTWDAPDPATAQRRFELRRLG 357 Query: 349 ---NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 P + A++ + + + + N LP P E Sbjct: 358 QVATTPSSGWSVGASAWDRERSRWDVGSPATALNTPLPIVPEAPQSPPSPTLVPEPARQT 417 Query: 406 LGIAC------------------AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 G Q+ YI+++ +G+ ++DQHAAHER+ +EK+ + Sbjct: 418 PGEPITPAVPAAAPSALPPLRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKLMNQY 477 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + SQ LL P+ +++ AL++ + E L G E +G + +R IPA L Sbjct: 478 AQHAVESQQLLIPQAVEVSPEASALLLGNAERLAEWGFVLEPWGTG-VLVRAIPATLPTD 536 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 + Q + +I +++ + L+ E +L T+AC+ S+R+G+ + EM +LLR++E+ Sbjct: 537 ELTQAIHEIAEKLAGRGGSDPLE-WREAMLITLACHTSVRAGQPLSHEEMRQLLRQLEQC 595 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRPT I + + +E+ FGR Sbjct: 596 VSPRTCPHGRPTMILMTPAQLERQFGR 622 >gi|210612718|ref|ZP_03289433.1| hypothetical protein CLONEX_01635 [Clostridium nexile DSM 1787] gi|210151411|gb|EEA82419.1| hypothetical protein CLONEX_01635 [Clostridium nexile DSM 1787] Length = 663 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 192/661 (29%), Positives = 313/661 (47%), Gaps = 72/661 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + I++IAAGE+IERP+ IKEL+EN++DA +S V I GG SF +ITDNG G Sbjct: 4 IQVLDQITIDKIAAGEVIERPASIIKELVENAIDAGASAVTVEIKEGGISFIRITDNGCG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + EE+P+A RH TSKI DD + + + GFRGEAL SI A++ + L+++ TG + Sbjct: 64 IPKEEVPLAFLRHSTSKIRSVDDLTTVASLGFRGEALSSIAAIAQVELITKTKDEVTGTR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G ++ GT V +F+ PAR FLK+ E + +++++ R+A+++P Sbjct: 124 YRIEGGAEKAIEDTGAPDGTTFLVHQIFYNTPARRKFLKTPMTEASHVSELMTRLALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +VS F + S NG + I V G D NN +E NE+ + I +QG+ G P Sbjct: 184 EVSIQFINNGQEKLH---TSGNGKLKDIIYHVFGRDIANNLLETNERIDGIQVQGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +RGN N FINGR V+ I I AY + +YP L +D +DVNVH Sbjct: 241 IISRGNRNYENYFINGRYVKSNIIAKAIEDAYKDFTMQHKYPFTALHFTMDGTDLDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL----------------------- 337 P K +RF N + NFI ++++ +++ + L Sbjct: 301 PTKMELRFSNQQGVYNFIYNALKQTLSEPELIPRVELPEAKEVPVKAEKIVERKQEQPMT 360 Query: 338 -----------------------SKKMISSFHQDNAPKTHLPKYATSLTNTQE------- 367 ++ ++++HQ P + N Sbjct: 361 PVREERKTPVIEEEKNLDYFMKKMRERVTAYHQQAVEVKPTPAPSVIQENVNYEALPASQ 420 Query: 368 ----KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY----------QLGIACAQI 413 K + E R + +P E+ V E + + Q Q+ Sbjct: 421 VAAVKQPVPEQRTVAKEPMPEQAVAPREEKSVVTEKQLDFFEEKLLTKKAAQEYKIIGQL 480 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 + Y + + + L I+DQHAAHER+++EK + + TSQ L P I++L E + Sbjct: 481 FETYWLVEFHEQLYIIDQHAAHERVLYEKTLRGMKDREFTSQYLSPPIILNLSMQEEEAL 540 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 H + +G + E FG ++ AIR +P L +L +++D+++D + D + Sbjct: 541 NTHMDIFTNIGFEIEPFGGDSYAIRAVPDNLFSIAKRELFTEMLDQLVDGIHSSLAPDIV 600 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 +A+M+C +++ ++ + E+ L+ E+ + N C HGRPT I + ++EK F Sbjct: 601 AEKVASMSCKAAVKGNSRLSAAEVETLIGELLELENPYHCPHGRPTIIAMTKRELEKKFK 660 Query: 594 R 594 R Sbjct: 661 R 661 >gi|114569167|ref|YP_755847.1| DNA mismatch repair protein [Maricaulis maris MCS10] gi|114339629|gb|ABI64909.1| DNA mismatch repair protein MutL [Maricaulis maris MCS10] Length = 633 Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 242/623 (38%), Positives = 370/623 (59%), Gaps = 31/623 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + +N+IAAGE++ERP+ +KEL EN+LDA + R++ GGG I D+G G Sbjct: 10 IRRLPPETVNRIAAGEVVERPASVVKELAENALDAGARRIDITAEGGGLVRLLIEDDGKG 69 Query: 63 MTSEEIPMAVQRHCTSKI------SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 M+ E+ + ++RH TSK+ +DD NI T GFRGEALPSIG+++ L++ ++ Sbjct: 70 MSPAELELCIERHATSKLPVGENGADDLLNISTMGFRGEALPSIGSIARLSITTQAKGKG 129 Query: 117 TGAQIAISGEKISSVRPVA--MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRR 174 I + G K + + P A GT +EVRDLF+ PARL FLKSE+ E ITDV++R Sbjct: 130 DAWAILVEGGKTNGIAPAAPLGRGGTRIEVRDLFYATPARLKFLKSERSENLGITDVVKR 189 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPE--RISQVIGEDFINNAVELNEKSNEIT 232 MA++ P V F + R + + G R+S ++G DF NA+E+++ + Sbjct: 190 MAMSRPDVGFFLTLDGRKRLSVAAERGEGADARIARMSAILGADFGENALEVDQTREGVR 249 Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 + G+ +PT++RGNA Y+F+NGR V+DK + +R AY + + R+PVV L +E+ Sbjct: 250 IFGFASLPTYSRGNAMHQYLFVNGRPVRDKLLGGAVRGAYQDFLARDRHPVVALNVELPT 309 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK 352 +VDVNVHPAK+ +RFR+ ++R I+ S++ A+ G S+ ++ + + Sbjct: 310 DEVDVNVHPAKAEVRFRDAALVRGLIVGSLRHALAGAGHRASTTVAGYALGRVRPEGYQP 369 Query: 353 ---------------THLPKYATSLTNTQEKLFLQ------ENRLSTNDLLPSDDPTYSE 391 Q+++F E D + P Sbjct: 370 PQPPPGGYQSHTNSLAGWGAPRPPSEPVQDRVFDPGMSARVEPDQPAYDGGMGEMPQAGF 429 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 D + + LG+A AQ+H+ Y+++QT DG+VIVDQHAAHERL++E+M++ T Sbjct: 430 DPAQQPSAPPLDWPLGVARAQLHETYVVAQTGDGIVIVDQHAAHERLVYERMKKMIAETG 489 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + Q LL PEI++L E E ++E E+L LG+ E FG AIA+RE P++L K NI Sbjct: 490 VQRQRLLVPEIVNLDEAEARRLLERGEELEELGLVIEAFGQGAIAVRETPSLLKKLNIQG 549 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 L+RD+ D++ + +L++++E+++ TMAC+GS+RSGR++ EMN LLREME P+S Sbjct: 550 LIRDLADDLAEYDQALSLKEKLEDVVGTMACHGSVRSGRRLTGEEMNALLREMEATPHSG 609 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+++LKLSDIE+LFGR Sbjct: 610 QCNHGRPTYVELKLSDIERLFGR 632 >gi|163855132|ref|YP_001629430.1| DNA mismatch repair protein [Bordetella petrii DSM 12804] gi|163258860|emb|CAP41159.1| DNA mismatch repair protein [Bordetella petrii] Length = 641 Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 206/631 (32%), Positives = 336/631 (53%), Gaps = 46/631 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + +I+QIAAGE+IERP+ +KE++EN++DA + +E + GGG ++D+G G Sbjct: 16 IAALPDLLISQIAAGEVIERPASVLKEVLENAIDAGARAIEVRLEGGGIRRIAVSDDGVG 75 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + EE+P+A+ RH TSKI + ++ + GFRGEAL SI +V+ +TL+SR Q Sbjct: 76 IPPEELPLALARHATSKIRSLGELESVASMGFRGEALASIASVAQVTLISRTRDGEHAWQ 135 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ P + PGT V+VR LF ++PAR FL++E E D + R+A+A+P Sbjct: 136 IDGGSLQV---TPASGPPGTTVDVRQLFDSVPARRKFLRAEATEFGHCVDALERIALAHP 192 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F + + + +RI V+G +F + + + + I L G P Sbjct: 193 DIAFRLFHHDRAQRQWLP----ADPGQRIRDVLGAEFTEHGLPVEASAGAIGLSGMITRP 248 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T R A++ Y+++NGR V+D+ + +R AYA+ + R P VL L+IDP VDVNVH Sbjct: 249 TAARARADRQYLYVNGRYVRDRTVSHALRAAYADVLHGDRQPAYVLYLDIDPGAVDVNVH 308 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-------------------------S 335 PAK +RFR+ + F+ Q + +A+ + G +++ Sbjct: 309 PAKHEVRFRDSGAVHRFVSQVVGQALAQTGGASAVPAAAGMAPGAPAAASDTGAPALTVE 368 Query: 336 VLSKKMISSFHQDNAPKTHLPKY-ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 M+S+ A P A +L + + D P + Sbjct: 369 TTPAAMLSAGGGSAAAWPAAPDRTARPHAQVPFRLHTEPAGIPATDWRTLYRPLDNTAPA 428 Query: 395 PVEESEA-----------THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 P E + LG+A AQ+H YI++Q GLV+VD HAAHER+++E++ Sbjct: 429 PATLREPAPASPRALPADEEHPLGMALAQLHGIYILAQNRRGLVLVDMHAAHERVVYEQL 488 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 +Q ++ + Q LL P + E + AL EH ++L LG GP +IA+R +PA+ Sbjct: 489 KQALDARDLPRQDLLVPVVFHAQEKDVALAEEHQQELAGLGFDLRPAGPTSIAVRSVPAL 548 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 L++ +I + R ++ ++ + L ++ +L+TMAC+GS+R+ R++ EMN LLR+ Sbjct: 549 LARGDIETMARAVLRDLASVGVSRLLTEQRNELLSTMACHGSVRANRRLSIEEMNALLRQ 608 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ME + QCNHGRPT+++ +SD++KLF R Sbjct: 609 MEVTERADQCNHGRPTWVQWSVSDLDKLFLR 639 >gi|52080311|ref|YP_079102.1| DNA mismatch repair protein [Bacillus licheniformis ATCC 14580] gi|52785687|ref|YP_091516.1| DNA mismatch repair protein [Bacillus licheniformis ATCC 14580] gi|319645908|ref|ZP_08000138.1| DNA mismatch repair protein mutL [Bacillus sp. BT1B_CT2] gi|81825299|sp|Q65JE1|MUTL_BACLD RecName: Full=DNA mismatch repair protein mutL gi|52003522|gb|AAU23464.1| MutL [Bacillus licheniformis ATCC 14580] gi|52348189|gb|AAU40823.1| MutL [Bacillus licheniformis ATCC 14580] gi|317391658|gb|EFV72455.1| DNA mismatch repair protein mutL [Bacillus sp. BT1B_CT2] Length = 636 Score = 523 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 182/637 (28%), Positives = 304/637 (47%), Gaps = 49/637 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + + N+IAAGE++ERP+ +KEL+EN++DA SS +E + G + ++ D+G Sbjct: 3 KIVQLPDDLSNKIAAGEVVERPASVVKELVENAIDANSSVIEIDVEEAGLASIKVLDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +E+ A RH TSKI D D + T GFRGEALPSI +VSHL++ + G Sbjct: 63 GMDAEDCRTAFLRHATSKIKDENDLFRVRTLGFRGEALPSIASVSHLSIKTST-GEGAGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G +I S + GT + V +LFF PARL ++K+ E ITDV+ R+A+A+ Sbjct: 122 HLTLQGGRIISEQKAPSRRGTEITVTNLFFNTPARLKYMKTIHTELGNITDVVNRIALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + + NG+ ++ + G + L +S + ++GY + Sbjct: 182 PEVSIRLRHQGK---TLLQTNGNGDVRHVLAAIYGTAVAKKMLPLEARSLDFEVKGYIAL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR +++ ++ I Y +P+GR+P+ + + +DP VDVNV Sbjct: 239 PEITRASRNYMSSVVNGRYIKNFPLVKAIHEGYHTLLPIGRHPITFIEINMDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HP+K +R T + I +I+ ++ + S + KK Sbjct: 299 HPSKLEVRLSKETELHELIRDAIKDVFKQQQLIPSVQVPKKTAPLINKPEQQKLDFDQVR 358 Query: 342 ------------------------ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLS 377 +SS +D P + + + +T+ + E Sbjct: 359 EPAPLSDSDVEREYKPEPSFSAMKLSSLVKDPPPSAPVEREENVMQDTEPEWPGAEEYTP 418 Query: 378 TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 +P + +N EE+ + Q+H YI++Q +GL I+DQHAA ER Sbjct: 419 EAAPAVQAEPEQAGENVQDEETPKERVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQER 478 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 + +E R+ + Q LL P + E I +H +DL ++G+ E FG + + Sbjct: 479 IKYEYFREKVGEVESEVQDLLVPLTFHYSKNEALTIDQHLDDLAKVGVFLESFGAGSYIV 538 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 R P K ++ DII +++D T ++ E M+C GSI++ ++ E+ Sbjct: 539 RCHPTWFPKGEETTIIEDIIQQVLDDRTID-IKKLREEAAIMMSCKGSIKANHHLRDDEI 597 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL E+ + + C HGRP I ++EK+F R Sbjct: 598 TALLDELRRTSDPFTCPHGRPIIIHYSTYEMEKMFKR 634 >gi|313623817|gb|EFR93943.1| DNA mismatch repair protein MutL [Listeria innocua FSL J1-023] Length = 603 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 198/604 (32%), Positives = 310/604 (51%), Gaps = 19/604 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHLTL + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLTLETST-GETKGTT 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ITLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G ++ + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGVSIARKSIPVKAESLDFKISGYAILP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM---------ISSFHQDNAP 351 PAK +R + I Q I+ A ++ + +SKK SF ++ P Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKDAFHQLQLIPDGEVSKKQKEQQKSEQIQMSFEENRQP 360 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIAC 410 K P S N E + E +D + TY+ + P + E + Sbjct: 361 KE--PPTLFSKPNIPEYVPSDERAPKDDDFILETMSTYNPETQPEQVEEQKERIPKMYPI 418 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 Q+H YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E Sbjct: 419 GQMHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPSDEY 478 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 + E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ Sbjct: 479 VRLEEQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAP-SISIH 537 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 E+ M+C SI++ + +M LL + + + C HGRP I+ ++EK Sbjct: 538 KLREDTAIMMSCKKSIKANHYLTMQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEK 597 Query: 591 LFGR 594 +F R Sbjct: 598 MFKR 601 >gi|170746511|ref|YP_001752771.1| DNA mismatch repair protein MutL [Methylobacterium radiotolerans JCM 2831] gi|170653033|gb|ACB22088.1| DNA mismatch repair protein MutL [Methylobacterium radiotolerans JCM 2831] Length = 648 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 238/638 (37%), Positives = 365/638 (57%), Gaps = 47/638 (7%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R+L ++++IAAGE++ERP+ A+KEL+EN++DA + +E + GG+ ++ D+G GM Sbjct: 10 RRLDPVLVDRIAAGEVVERPASAVKELVENAIDAGARAIEVTVEAGGRRLIRVVDDGRGM 69 Query: 64 TSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 T +++ +AV+RH TSK+ D + I T GFRGEALPSIGAVS L +++R P+ GA + Sbjct: 70 TPDDLDLAVERHATSKLPGGDLTAIDTLGFRGEALPSIGAVSRLAIVTRTPEAEAGASLM 129 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + VRP GT +EV +LF PARL FLKS++ E I + +RR+A P + Sbjct: 130 VEAGLKGQVRPAPAQRGTRIEVTELFAATPARLKFLKSDRAENAAIAETLRRLAATQPGI 189 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 FT + ++ R++ V+G+DF+ NA+ ++ + G+ G+PT+ Sbjct: 190 RFTLRADAGQPLVLPAETGAEAELRRLAAVLGQDFLANALPVSLAREGFAVTGHVGLPTY 249 Query: 243 NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPA 302 +RG A ++ +NGR V+D+ +L IR AYA+T+ R+PV+ L + DP VDVNVHPA Sbjct: 250 HRGAATHIHLAVNGRPVRDRLLLGAIRGAYADTLASDRHPVLGLAVACDPGLVDVNVHPA 309 Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP----------- 351 K+ +RFR P ++R I+ +I A+ + G +++ + + + + P Sbjct: 310 KTEVRFREPGLVRALIVSAIHDALRRGGARSATTGAARTLDALRPAGPPLATHSGATAPS 369 Query: 352 ------KTHLPKYATSL-------TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV-- 396 P A S+ +T + Q R+ S ++ Sbjct: 370 LFRPTRPGPFPSGAPSVAAPSGYRPSTAWRPAPQPARVEPAGFGESAQAVWTGPESVAVA 429 Query: 397 -----------EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 E +EA + LG A AQIH+ YI++QT DGLVIVDQHAAHERL++E+M+ Sbjct: 430 APPQADTRVADEAAEALDHPLGAARAQIHETYILAQTRDGLVIVDQHAAHERLVYERMKT 489 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 + + I Q LL P+++++ E ++ DL RLG+ E FGP A+ +RE+PA L Sbjct: 490 EREAGGIARQGLLIPDVVEMSPEEADRLVAAAPDLDRLGLSIEAFGPGAVLVREVPAALI 549 Query: 506 KKNIPQLLRDIIDEIIDSSTTYT---------LQDRIENILATMACYGSIRSGRKMQSIE 556 + L+ DI+D + S + L R++ IL+ M+C+GSIR+GR+++ E Sbjct: 550 GASTRDLVTDILDALQASGDEESGVAATEGGPLGRRLDAILSRMSCHGSIRAGRRLRPEE 609 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MN LLREME PNS QCNHGRPT I+LKL+DIE+LFGR Sbjct: 610 MNALLREMEATPNSGQCNHGRPTSIELKLADIERLFGR 647 >gi|34581050|ref|ZP_00142530.1| DNA mismatch repair protein MutL [Rickettsia sibirica 246] gi|28262435|gb|EAA25939.1| DNA mismatch repair protein MutL [Rickettsia sibirica 246] Length = 610 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 249/611 (40%), Positives = 373/611 (61%), Gaps = 18/611 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE IN+IAAGE+IERP+ +KEL+EN++DA S++++ ++ GK+ I+D+G Sbjct: 1 MTIKFLSESTINRIAAGEVIERPASVVKELVENAVDASSTKIDIILERAGKNLIIISDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK + DF NI+TFGFRGEALPSI A+S + + S+ + Sbjct: 61 IGMTDKELEIAVERHTTSKFDESDFLNINTFGFRGEALPSIAAISKMLITSKKRDADKAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G V N GT +E+RDLFF PARL FL++++ E DV++++A+A+ Sbjct: 121 QIKLIGGNEKQVTISVHNEGTKIEIRDLFFATPARLKFLRADKTELAATVDVVKKIALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 PK+SF+ + N K+ Q+ + N +RI VIG+DFI NA ++ K+ + ++ GYT Sbjct: 181 PKISFSLTHDGKNLLKLKGQNKDAETNLKQRIIDVIGDDFIKNAAYIDFKTPDFSICGYT 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 PT+NR ++ ++FIN R V+DK + +R AY + + RYP+ + L+IDP+ VDV Sbjct: 241 SSPTYNRASSEDQFLFINNRPVKDKLLQVALRVAYQDYLARDRYPICAIFLQIDPQLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK+ +RF +P +RN +I++I+ A+ K TS+ ++ + F K P Sbjct: 301 NVHPAKAEVRFHDPNYVRNLLIEAIKNALTNKSHVTSTTIASDALELFKNPLVNKQS-PV 359 Query: 358 YATSLTNTQEKLFLQENRLSTN------------DLLPSDDPTYSEDNDPVEESEATHYQ 405 N++ + + N D L +N E + Sbjct: 360 SKVINVNSKSADYRPTTHSTLNIVPQNHVCQKLIDTLSHAKIEQEVENRIEHEQQTRKQY 419 Query: 406 L-GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 G A AQ+H NYIISQT D +VI DQHAAHERL +EK++ + ++ Q LL PEI++ Sbjct: 420 KLGAAKAQLHTNYIISQTEDSIVITDQHAAHERLGYEKIKDYLKTEELIKQRLLIPEIVE 479 Query: 465 LL-EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 L E + + +H E L++LG+ E+FG +I + EIP IL N+ +L++D+ D + D Sbjct: 480 LPNEKKADCLYDHREKLYKLGLTLEKFGEKSIIVTEIPNILGDVNVQKLIQDLADHLSDF 539 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 L + IE++ T AC+ SIR+GRK+ + EMN LLR+ME P S QCNHGRPT+I+L Sbjct: 540 GKNIALTELIEHVTETYACHYSIRAGRKLSADEMNALLRQMENTPLSGQCNHGRPTYIEL 599 Query: 584 KLSDIEKLFGR 594 KL DIE+LFGR Sbjct: 600 KLKDIERLFGR 610 >gi|312114924|ref|YP_004012520.1| DNA mismatch repair protein MutL [Rhodomicrobium vannielii ATCC 17100] gi|311220053|gb|ADP71421.1| DNA mismatch repair protein MutL [Rhodomicrobium vannielii ATCC 17100] Length = 605 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 239/606 (39%), Positives = 371/606 (61%), Gaps = 14/606 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+LS+ IN+IAAGE+IERP+ A+KEL+EN++DA ++ +E + GG S +++D+G Sbjct: 1 MTIRELSQVEINRIAAGEVIERPASAVKELVENAIDAGATAIEVIAESGGLSLIRVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ + V+RH TSK+ D I T GFRGEALPS+G+V L++++RP G Sbjct: 61 IGMDEADLALCVRRHATSKLPSGDLMAIRTLGFRGEALPSLGSVGTLSIVTRPRALTRGH 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G + S VRP A PGT VEVRDLF PARL F+KSE+ E I+DV++R+A+A Sbjct: 121 EIEVRGGETSPVRPAAARPGTCVEVRDLFAATPARLKFMKSERAENAAISDVVKRLALAC 180 Query: 180 PKVSFTFSTIKSNRYKM--NFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P V F + + ++ R+++++G +F +A ++ + + + L GY Sbjct: 181 PHVGFALTVGERASLQLARAADGDENAVRARLARIMGREFGEDAEPVHLERDGLALTGYA 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G PT NR +A+ YVF+NGR V+D+ + S IR AY + +P GR+P+ VL L + VDV Sbjct: 241 GRPTLNRPDASLQYVFVNGRPVKDRLLFSAIRGAYVDVVPRGRFPLAVLFLTVRVEDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--------FHQDN 349 NVHPAK+ +RFR +++R ++ ++ A+ G + +S + Sbjct: 301 NVHPAKAEVRFREASLVRALVVSALHDALRCAGAMAARPTGALTPASAAAPEPLQYRAPL 360 Query: 350 APKTHLPKYAT-SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 P +T T+ +E L+ + S ++ + +A + +LG+ Sbjct: 361 RTWPQSPYRSTYPQPMTEPGAGFEETALAFDTEDASQSSANGATHEARDSEDANYERLGM 420 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 A AQ+H YI+S+T DG++++DQHAAHER+++EK++ +I Q LL PEI+++ E Sbjct: 421 ARAQVHNTYILSETPDGVILIDQHAAHERIVYEKLKAALLGGRIARQLLLIPEIVEMPED 480 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 + AL+ EH E + G+ E FGP AI +RE+PA+L ++ L+RD+ E+ DS T Sbjct: 481 DAALVAEHAETVAGSGLALESFGPGAIIVREVPALLGHCDLQTLVRDLAHELKDS--ANT 538 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 ++ R+ I ATMAC+GS+R+GR M+ EMN LLREME PN++QCNHGRPT+++L D+ Sbjct: 539 VEARLHAICATMACHGSVRAGRPMRLDEMNALLREMETTPNAAQCNHGRPTYVELSRGDL 598 Query: 589 EKLFGR 594 E+LF R Sbjct: 599 ERLFER 604 >gi|262279503|ref|ZP_06057288.1| DNA mismatch repair ATPase [Acinetobacter calcoaceticus RUH2202] gi|262259854|gb|EEY78587.1| DNA mismatch repair ATPase [Acinetobacter calcoaceticus RUH2202] Length = 649 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 211/638 (33%), Positives = 338/638 (52%), Gaps = 45/638 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERPS +KEL+ENS+DA ++ + IA GG + +I DNG Sbjct: 10 RIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIVRIAQGGSTLIEIIDNGH 69 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ SE++ +AV RH TSKI ++D I + GFRGEAL SI AVS LTL S ++ G Sbjct: 70 GIHSEDLALAVMRHATSKIKTAEDLHAIVSLGFRGEALASIAAVSRLTLTSSQDESGIGH 129 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ V+ VA GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 130 QVEVNGTAFDHQEVQAVAAQKGTHIRVQDLFFNVPARRKFLKKPTTEFGHIEEIVRRLAL 189 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + F + R + + +R+ Q++G F+ NA ++ +S + L G+ Sbjct: 190 THFDIRFVLEHNDNIRINLPIADSGELRFQRVQQLLGSQFVQNAYWMDAESISMRLSGWL 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP +DV Sbjct: 250 GHPSDARAQADMQYVYVNGRIVKDKTISHALRMAYDGILHGHQHSSYLLFLEVDPENIDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------------VLSKKMI 342 NVHP K IRF N + F+ ++ +++ +++ K Sbjct: 310 NVHPTKHEIRFLNQREVHEFVRHYAKETLSQFQTASADLAQAMKVDETSDYSVQPQPKYQ 369 Query: 343 SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT-------------- 388 F A + P N +L N + +D Sbjct: 370 EQFALHRANEALNPDNEARAQNAPTELLTDFNASRPQAVHYADQTPRYNGSPQLNNALKT 429 Query: 389 -----------YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 +S + D ++ + LGIA AQ+H Y+++Q T+GL+IVD HAAHER Sbjct: 430 YLAPLRDQPANFSVNEDIEPVTKVDEFPLGIAIAQLHGIYVLAQNTEGLIIVDMHAAHER 489 Query: 438 LIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 ++ ++M+ ++ + TSQ LL P++I + + + E L RLG++ + +G I Sbjct: 490 ILLQQMKNAWDKPEFWTSQQLLIPKVISISRMQAMRVEELKPQLERLGLEIDLYGDEQII 549 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R +PAIL K + L+ ++++++ + L + + +LA MAC+G++R+ R++ E Sbjct: 550 VRGVPAILQKADFENLIPELLNDLDPNDEAQGLLQKRDELLAGMACHGAVRAHRQLSLSE 609 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MN LLR+ME+ +SQCNHGRPT+ LS ++KLF R Sbjct: 610 MNALLRQMEQTEFASQCNHGRPTWRAFPLSQLDKLFAR 647 >gi|16800509|ref|NP_470777.1| DNA mismatch repair protein [Listeria innocua Clip11262] gi|20455106|sp|Q92BV2|MUTL_LISIN RecName: Full=DNA mismatch repair protein mutL gi|16413914|emb|CAC96672.1| DNA mismatch repair protein [Listeria innocua Clip11262] Length = 603 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 199/604 (32%), Positives = 313/604 (51%), Gaps = 19/604 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ +A RH TSKI + D +HT GFRGEALPSI +VSHLTL + G Sbjct: 65 IEEEDVAIAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLTLETST-GETKGTT 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G ++ + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGVSIARKSIPVKAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM---------ISSFHQDNAP 351 PAK +R + I Q I+ A ++ + +SKK SF ++ P Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKDAFHQLQLIPDGEVSKKQKEQQKSEQIQMSFEENRQP 360 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIAC 410 K P S N E + E +D + PTY+ + P + E + Sbjct: 361 KE--PPTLFSKPNIPEYVPSDEIVPKEDDFILETMPTYNPETQPEQVEEQKERIPKMYPI 418 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 Q+H YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E Sbjct: 419 GQMHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPSDEY 478 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 + E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ Sbjct: 479 VRLEEQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAP-SISIH 537 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 E+ M+C SI++ + +M LL + + + C HGRP I+ ++EK Sbjct: 538 KLREDTAIMMSCKKSIKANHYLTMQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEK 597 Query: 591 LFGR 594 +F R Sbjct: 598 MFKR 601 >gi|325122664|gb|ADY82187.1| enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA [Acinetobacter calcoaceticus PHEA-2] Length = 649 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 210/640 (32%), Positives = 342/640 (53%), Gaps = 49/640 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERPS +KEL+ENS+DA ++ + IA GG + +I DNG Sbjct: 10 RIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIVRIAQGGSTLIEIIDNGH 69 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +AV RH TSKI ++D I + GFRGEAL SI AVS LTL S ++ G Sbjct: 70 GIHPDDLALAVMRHATSKIKTAEDLHAIVSLGFRGEALASIAAVSRLTLTSSQDESGIGH 129 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ + V+ VA GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 130 QVEVNGTAFEHQEVQAVAAQKGTHIRVQDLFFNVPARRKFLKKPTTEFGHIEEIVRRLAL 189 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + F + R + + +R+ Q++G F+ NA ++ +S + L G+ Sbjct: 190 THFDIRFVLEHNDNIRINLPIADSGELRFQRVQQLLGSQFVQNAYWIDAESISMRLSGWL 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP +DV Sbjct: 250 GHPSDARAQADMQYVYVNGRIVKDKTISHALRMAYDGILHGHQHSSYLLFLEVDPENIDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K IRF N + F+ ++ + + S+ L + M + + D + + PK Sbjct: 310 NVHPTKHEIRFLNQREVHEFVRHYAKETLAQFQT-ASADLVQAMKADENSDYSVQPQ-PK 367 Query: 358 YATSLTNTQEKLFLQENRLSTND------------------------------------- 380 Y + + L + + Sbjct: 368 YQEQFSLHRANETLNSDSEARTQHAPTELLTDFNASHPQAIHYADQTPKYNGSAQLNNAL 427 Query: 381 -----LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 L ++S + D ++ + LGIA AQ+H YI++Q T+GL+IVD HAAH Sbjct: 428 KTYLAPLRDQPASFSVNEDVEPVAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAH 487 Query: 436 ERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA 494 ER++ ++M+ ++ + TSQ LL P++I + + + E L RLG++ + +G Sbjct: 488 ERILLQQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEELKPQLERLGLEIDLYGDEQ 547 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQS 554 + +R +PAIL K + L+ ++++++ + L + + +LA MAC+G++R+ R++ Sbjct: 548 VIVRGVPAILQKADFENLIPELLNDLDPNDEAQGLLQKRDELLAGMACHGAVRAHRQLSL 607 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME+ +SQCNHGRPT+ LS ++KLF R Sbjct: 608 SEMNALLRQMEQTEFASQCNHGRPTWRAFPLSQLDKLFAR 647 >gi|119899416|ref|YP_934629.1| DNA mismatch repair protein [Azoarcus sp. BH72] gi|119671829|emb|CAL95743.1| DNA mismatch repair protein [Azoarcus sp. BH72] Length = 621 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 205/627 (32%), Positives = 330/627 (52%), Gaps = 41/627 (6%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I++L + ++NQIAAGE++ERP+ +KE++EN++DA + VE + GG +ITD+ Sbjct: 1 MPQIQRLPDLLVNQIAAGEVVERPASVLKEVLENAVDAGARAVEVQLEQGGVRRIRITDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +E+ +A++RH TSKI+ DD + T GFRGEAL +I V+ + SR Sbjct: 61 GCGIARDELALALERHATSKIATLDDLERVGTMGFRGEALAAIAGVARTVITSRAEGAAH 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 +I S S+ P A+N GT+V+V DL++ PAR FLKSE E +V RR+A+ Sbjct: 121 AWRIDGSD---RSLAPAALNQGTVVDVADLYYNTPARRKFLKSEGTEYAHCDEVFRRVAL 177 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A P ++ S +++ G RI+ ++G+DF+ A + + + L GY Sbjct: 178 ARPDIALQLSHNGRVAHRLPV----GEPVRRIAALMGDDFLAQARAVVAEGGPLRLTGYA 233 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P ++R + + Y F+NGR V+DK + +R AYA+ + R+P VL LE+DP VDV Sbjct: 234 SLPAYSRASRDAQYFFVNGRFVRDKLLTHALRQAYADILHGARHPAYVLFLELDPAGVDV 293 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA-----PK 352 NVHPAK +RFR+ + F+ ++ +A+ + G + + + P Sbjct: 294 NVHPAKIEVRFRDSRAVHQFVFHAVSRALAESGAALAGGNGAGEPAPLPSSGQRVAASPP 353 Query: 353 THLPKYATSLTNTQEKLFLQENRLS-------------------------TNDLLPSDDP 387 S Q +L + S Sbjct: 354 AAGAGQWPSAQAVQGRLAMDSGAASHRYYDFVAAARPDGTGGAAGAAGLVAAPPRMDAAA 413 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 S S LG A AQ+H Y+++Q GLV+VD HAAHER+++EK++ Sbjct: 414 RPSGYAPAPLPSADKAPPLGYALAQLHGIYVLAQNESGLVLVDMHAAHERILYEKLKVVL 473 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + T + Q LL P + + + A+ E E L R+G + GP +A+R +PA+L+ Sbjct: 474 DGTP-SIQRLLIPAVFSVSARDLAVAEECGEVLARMGFEVGVAGPQELAVRTVPALLASA 532 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 + +L+R +++E+ + T + R +LATMAC+G++R+ R + EMN LLR+ME Sbjct: 533 PVAELMRKLLEELREFPATEVITARRNELLATMACHGAVRANRTLTLPEMNALLRDMEAT 592 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + QCNHGRPT+ +L ++D+++ F R Sbjct: 593 ERADQCNHGRPTWTQLTMADLDRFFMR 619 >gi|302670849|ref|YP_003830809.1| DNA mismatch repair protein MutL [Butyrivibrio proteoclasticus B316] gi|302395322|gb|ADL34227.1| DNA mismatch repair protein MutL [Butyrivibrio proteoclasticus B316] Length = 666 Score = 521 bits (1343), Expect = e-146, Method: Composition-based stats. Identities = 194/663 (29%), Positives = 325/663 (49%), Gaps = 74/663 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L + I+QIAAGE++ERP+ +KEL+EN++D+ ++ V I GGG ++TDNG G Sbjct: 4 INELDKNTIDQIAAGEVVERPASVVKELVENAIDSGATAVTVEIKGGGIDMIRVTDNGSG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +I A +RH TSK+ DD +IH+ GFRGEAL SI +V+ + +++ + TG + Sbjct: 64 IEKSQIRKAFKRHATSKLKNIDDLFSIHSLGFRGEALSSISSVAQVDCITKTKDDLTGTR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 +I+G + + + + GT +R+LF+ PAR FLK+ Q E + I DV+ +A+ P Sbjct: 124 YSINGGEEAGMDEIGAPDGTTFIIRNLFYNTPARKKFLKTPQTEGSYIGDVMEHLALDNP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF + K +++ S NG+ E I ++ G D + ++ + IT++GY G P Sbjct: 184 TISFHYINNKDDKF---STSGNGDLKELIYRIYGRDVSVSVRPISASDHGITVEGYLGEP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T NR N N F+NGR V+DK I + Y + + + ++P +L + +DP VDVNVH Sbjct: 241 TLNRSNRNFEIFFVNGRYVKDKIISKALEEGYKQYLMMHKFPFAILHIRMDPSMVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +RF N ++ +FI S++ ++ + + ++LS K + N + +T Sbjct: 301 PAKLEVRFNNQALLYDFIKTSVENVLSAQEMIPDALLSSKDDEKASEANGANSLSSTAST 360 Query: 361 -------------------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN-DPVEESE 400 E++ +EN+++ ++ + + + V +S Sbjct: 361 SGLAPEKVHAHETEKPSNRPAPQPFERVRFEENKVAESEPVYATGVKEKPIKIEDVNKSA 420 Query: 401 ATHYQLG------------------------------------------------IACAQ 412 G Q Sbjct: 421 VWTRIFGDLDGSKAEKNDRPSSIIKQQDAIVVEKKPVQLNLFDEKVLTKENVKEYEILGQ 480 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 I Y I D + +VDQHAAHE++ +E+M + + S I SQ + P I+ L E + Sbjct: 481 IFGTYWIIGFKDKMFMVDQHAAHEKVNYERMMKRYKSGDILSQMVNPPVIVTLSAAEEEI 540 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPA-ILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 +E+ + +LG E FG + A+R IP + N ++ ++I+DE+ ++ D Sbjct: 541 FLEYRQYFEKLGFNIENFGGHEYAMRAIPVDLFGCDNEKEMFQEILDELSHETSLDRTPD 600 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 I +A+MAC S++ +M + EM LL E+ K N C HGRPT I + +I+K Sbjct: 601 VINYKIASMACKASVKGNTRMTTQEMEALLDELLKLDNPYNCPHGRPTIISMSKYEIDKK 660 Query: 592 FGR 594 F R Sbjct: 661 FKR 663 >gi|332973074|gb|EGK11011.1| DNA mismatch repair protein MutL [Kingella kingae ATCC 23330] Length = 624 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 217/624 (34%), Positives = 341/624 (54%), Gaps = 35/624 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +L + +INQIAAGE++ERP+ A+KE++ENSLDA +++++ IAGGG ++ DNG Sbjct: 3 SIIQLPDHLINQIAAGEVVERPANALKEILENSLDAGATQIQIDIAGGGIKLIRVCDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E +P+A+ RH TSKI D + + GFRGE L S+ +VS LTL SRP A Sbjct: 63 GIDAESLPLALSRHATSKIKTLSDLERVRSMGFRGEGLASVASVSRLTLTSRPATQAHAA 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI V + GT VEV +LFF PAR FLKSE E ++ R+A+A Sbjct: 123 QIKAEDGVFQPVSAASHPVGTTVEVAELFFNTPARRKFLKSESTEYAHCLTMVERLALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+FT + QS +R++Q++G +F ++ ++ ++ + L G+ Sbjct: 183 PNVAFTLKNNDKLIFAYPAQSP----EQRVAQILGAEFHAASLPVSSENGALQLNGFVSK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PTF +G ++ Y F+N R V+DK +L ++ AY + + P L L IDP VDVN+ Sbjct: 239 PTFAKGKSDTQYFFVNQRFVRDKVMLHAVKQAYRDVLHNQITPAFALFLTIDPSLVDVNI 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI-------STSSVLSKKMISSFHQDNAPK 352 HP K+ IRFR+ + + + KA+ + ++L ++M + + AP Sbjct: 299 HPTKTEIRFRDSQAVHQLVFHCVNKALANTRADLTSSVSNAGAILHERMANDTAHEIAPN 358 Query: 353 THLPKYATSLTNT---------------QEKLFLQENRLS---TNDLLPSDDPTYSEDND 394 + T T + Q L L+E + + +L DD + Sbjct: 359 AYESSLHTRPTPSASVAPAPYAAYHAPRQSSLPLRERQAALDTYAELYRHDDDIEPMPSH 418 Query: 395 PVEE----SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 V+ + LG A AQ+ YI++QT DGL++VD HAA ER+ +EK++ ++ Sbjct: 419 TVQAALPTESREQHTLGFALAQLLGIYILAQTEDGLILVDMHAAAERINYEKLKTAHHAN 478 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 I +Q LL P + E A + E L G+ IA+R +P +LSK ++ Sbjct: 479 GIQAQMLLIPVVFAATHAEQAAVDEFSHSLREYGLDLVNAETGKIAVRTVPNMLSKSDVA 538 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 L R+++ +++ + + T++DR IL+TMAC+GS+R+GR++ EMN LLR+ME+ P S Sbjct: 539 TLAREVLRDLMATGQSPTVRDRENEILSTMACHGSVRAGRQLTLPEMNALLRDMEQFPRS 598 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 +QCNHGRPT++K+ L D++ LF R Sbjct: 599 NQCNHGRPTWVKIGLDDLDALFLR 622 >gi|226952695|ref|ZP_03823159.1| enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA [Acinetobacter sp. ATCC 27244] gi|226836563|gb|EEH68946.1| enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA [Acinetobacter sp. ATCC 27244] Length = 657 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 208/648 (32%), Positives = 339/648 (52%), Gaps = 55/648 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERPS +KEL+ENS+DA ++ + +A GG + +I DNG Sbjct: 8 RIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIIRVAQGGATLIEIIDNGN 67 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+AV RH TSKI +DD I + GFRGEAL SI AVS LTL S + G Sbjct: 68 GIHPEDLPLAVMRHATSKIQTADDLHAIVSLGFRGEALASIAAVSRLTLTSSQDEQGVGY 127 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ ++ VA GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 128 QVEVNGTAFDHQQIQAVAAQKGTHIRVQDLFFNVPARRKFLKKPSTEFGHIEEIVRRLAL 187 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + ++ F + R + + +R+ Q++G+ FI NA ++ +S + L G+ Sbjct: 188 THFEIRFVLEHNDNIRLNLPVADSGELRYQRVQQLLGQQFIQNAYWIDAESINMRLSGWL 247 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP +DV Sbjct: 248 GHPSDARAQADLQYVYVNGRIVKDKTISHALRMAYEGILHGHQHSSYLLFLEVDPENIDV 307 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K IRF N + F+ + +++ +++ + + A PK Sbjct: 308 NVHPTKHEIRFLNQREVHEFVRHYAKATLSQFQTASADLAQAMKVDETDHQAAQYQPQPK 367 Query: 358 YATSL---------------TNTQEKLFLQENRLSTNDLLPSDDPTYSEDND-------- 394 Y T+ +L + N+ + + + + Sbjct: 368 YQEQFNLHKAVVTEPLSDQQTDISTELLTEFNQSRPQAVHYTSGQSQQPRYNGSGQLNNA 427 Query: 395 ---------------------------PVEESEATHYQLGIACAQIHQNYIISQTTDGLV 427 V +S + LGIA AQ+H YI++Q T+GL+ Sbjct: 428 LKTYLAPLRESDVPTTAFDSGNDTVDRDVAQSRVDEFPLGIAIAQLHGIYILAQNTEGLI 487 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKIT-SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 IVD HAAHER++ ++M+ ++ + SQ LL P+++ + + I E L RLG++ Sbjct: 488 IVDMHAAHERILLQQMKAAWDKPEFWVSQQLLIPKVVSITRMQATRIEELQPQLQRLGLE 547 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 +++G + +R +PAIL K + L+ ++++++ + L + + +LA MAC+G++ Sbjct: 548 IDQYGDEQVIVRGVPAILHKADFSNLIPELLNDLDPNDEARGLLQKRDELLAGMACHGAV 607 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R+ R++ EMN LLR+ME+ +SQCNHGRPT+ L ++KLF R Sbjct: 608 RAHRQLSLSEMNALLRQMEQTEFASQCNHGRPTWRAFPLHQLDKLFAR 655 >gi|229587254|ref|YP_002845755.1| DNA mismatch repair protein [Rickettsia africae ESF-5] gi|259511149|sp|C3PM22|MUTL_RICAE RecName: Full=DNA mismatch repair protein mutL gi|228022304|gb|ACP54012.1| DNA mismatch repair protein MutL [Rickettsia africae ESF-5] Length = 610 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 248/610 (40%), Positives = 375/610 (61%), Gaps = 16/610 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE IN+IAAGE+IERP+ +KEL+EN++DA S++++ V+ GK+ I+D+G Sbjct: 1 MTIKFLSESTINRIAAGEVIERPASVVKELVENAVDASSTKIDIVLERAGKNLIIISDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK + DF NI+TFGFRGEALPSI A+S + + S+ + Sbjct: 61 IGMTDKELEIAVERHTTSKFDESDFLNINTFGFRGEALPSIAAISKMLITSKKRDADKAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G V N GT +E+RDLFF PARL FL++++ E DV++++A+A+ Sbjct: 121 QIKLIGGNEKQVTISVHNEGTKIEIRDLFFATPARLKFLRADKTELAATVDVVKKIALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 PK+SF+ + N K+ Q+ + N +RI VIG+DFI NA ++ K+ + ++ GYT Sbjct: 181 PKISFSLTHDGKNLLKLKGQNKDAETNLKQRIIDVIGDDFIKNAAYIDFKTPDFSICGYT 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 PT+NR ++ ++FIN R+V+DK + +R AY + + RYP+ + L+IDP+ VDV Sbjct: 241 SSPTYNRASSEDQFLFINNRSVKDKLLQVALRVAYQDYLARDRYPICAIFLQIDPQLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD----NAPKT 353 NVHPAK+ +RF +P +RN +I++I+ A+ K TS+ ++ + F +P + Sbjct: 301 NVHPAKAEVRFHDPNYVRNLLIEAIKNALTNKSHVTSTTIASDALELFKNPLVNKQSPVS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN-------DLLPSDDPTYSEDNDPVEESEATHYQL 406 + + + + N + N D L +N E + Sbjct: 361 KVINVNSKSADYRPTTHSTLNTVPQNHVCQKLIDTLSHAKIEQEVENRIEHEQQTRKQYK 420 Query: 407 -GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 G A AQ+H YIISQT D +VI DQHAAHERL +EK++ + ++ Q LL PEI++L Sbjct: 421 LGAAKAQLHTTYIISQTEDSIVITDQHAAHERLGYEKIKDYLKTEELIKQRLLIPEIVEL 480 Query: 466 -LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 E + + +H E L++LG+ E+FG +I + EIP IL N+ +L++D+ D + D Sbjct: 481 LNEKKADCLYDHREKLYKLGLTLEKFGEKSIIVTEIPNILGDVNVQKLIQDLADHLSDFG 540 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 L + IE++ T AC+ SIR+GRK+ + EMN LLR+ME P S QCNHGRPT+I+LK Sbjct: 541 KNIALTELIEHVTETYACHYSIRAGRKLSADEMNALLRQMENTPLSGQCNHGRPTYIELK 600 Query: 585 LSDIEKLFGR 594 L DIE+LFGR Sbjct: 601 LKDIERLFGR 610 >gi|95931317|ref|ZP_01314032.1| DNA mismatch repair protein MutL [Desulfuromonas acetoxidans DSM 684] gi|95132618|gb|EAT14302.1| DNA mismatch repair protein MutL [Desulfuromonas acetoxidans DSM 684] Length = 628 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 196/626 (31%), Positives = 322/626 (51%), Gaps = 37/626 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E + NQIAAGE++ERP+ +KEL+EN+LDA+++ V + GGK +++DNGF Sbjct: 6 RIAILPETLCNQIAAGEVVERPASVVKELVENALDAQATEVTVDVERGGKKKIRVSDNGF 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ + +RH TSKI D ++ + GFRGEALPSI AVS L ++S TG Sbjct: 66 GMSKEDLFLCFERHATSKIRSEKDLFHLSSLGFRGEALPSIAAVSRLAVVSGQAGEETGN 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + ++ P A + GT E+RDLFF +PAR FL+ ++ E I ++I R+++A+ Sbjct: 126 RLELVAGEVRHHEPEAASVGTRFEIRDLFFNLPARRKFLRRDETEFGHIAEIITRLSLAH 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + + + R++ V+G + ++++ + + L G+ G Sbjct: 186 PHVHFRLIHNQRTILDLY---RQKSLKARVADVLGRSVVEKLIDVDCGDDRLHLSGFIGD 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT NR + Y FINGR V+D+ + I Y + GRYP+ VL L ++P +VDVNV Sbjct: 243 PTLNRSSTQGIYSFINGRFVKDRVLQHAILDGYRHLLMKGRYPMCVLFLALEPEKVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI----------------- 342 HP K +RF + + +F+ S+++ + + KM Sbjct: 303 HPTKHEVRFHDQRGVHDFVSTSLRQQLRRHQDVPVCDGEPKMAPAVAPPAEPVTQPDLNL 362 Query: 343 ----------SSFHQDNAPKTHLPKYATSLTNTQEKLFL----QENRLSTNDLLPSDDPT 388 S+ + +P + + +E + +S P Sbjct: 363 RHVPAPSSVRSASVVEAQAAVSMPLQPPAASQVRESFPAYDDGGKPPVSVISSSPVGCHA 422 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 E +EES A + Q H++YI+ + D LV++DQHAAHER+ FE+++ Sbjct: 423 DGEKTLDLEESSAY-FSTLRIIGQFHRSYILCEDGDDLVLIDQHAAHERIGFERLKNQLA 481 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 I Q LL PE+I+L E A + + E +G E FG + A++ +PA + KK+ Sbjct: 482 QGSIEQQELLFPEVIELNLREDAELQDCRERFESMGFVLEPFGGTSWAVKAVPAYIEKKD 541 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 I ++ D++ + ++ Q I+ +L MAC+G IR+ + +Q EM LL +++ Sbjct: 542 IKTMVCDMLTDFSSVGSSDISQQAIDEVLIKMACHGMIRANQTLQLDEMVALLHQLDDVD 601 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP +L L D+EK+F R Sbjct: 602 FNRHCPHGRPVMQRLTLHDVEKMFRR 627 >gi|332185051|ref|ZP_08386800.1| DNA mismatch repair MutL family protein [Sphingomonas sp. S17] gi|332014775|gb|EGI56831.1| DNA mismatch repair MutL family protein [Sphingomonas sp. S17] Length = 583 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 212/585 (36%), Positives = 348/585 (59%), Gaps = 14/585 (2%) Query: 20 IERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 +ERP+ A+KEL+ENS+DA ++R+ V+ GG ++ D+G GM+++++ +A++RHCTSK Sbjct: 2 VERPASALKELVENSIDAGATRIAIVLVQGGIGRIEVADDGCGMSADDMALALERHCTSK 61 Query: 80 ISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNP 138 + D+ + T GFRGEALPSI +V+ +T+ SRP ++ G + ++ P A+ P Sbjct: 62 LPDEAIEAVLTLGFRGEALPSIASVARVTIESRPAGSD-GWSRVVDNGEVLRDGPAAVPP 120 Query: 139 GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNF 198 GT + V DLF +PAR FL+S + E D++RR+A+A P ++FT + Sbjct: 121 GTRIVVEDLFARVPARRKFLRSPRSEYAACLDMVRRLAMARPDIAFTLEHDGRRVLTV-- 178 Query: 199 QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRT 258 P R++ + N+V ++ + ++L G G+PTFNRG A+ Y+F+NGR Sbjct: 179 -PGGEERPGRVAGLTDRALAENSVAIDWVRDMVSLGGVAGLPTFNRGIADHQYLFVNGRP 237 Query: 259 VQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI 318 V+D+ ++ IR AYAE +P R+ VV L L++ P +VDVNVHPAK+ +RFR+P +IR I Sbjct: 238 VRDRLLMGAIRGAYAEMLPRDRHAVVALFLDMPPSEVDVNVHPAKTEVRFRDPALIRGMI 297 Query: 319 IQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS---------LTNTQEKL 369 + +++A+++ G + ++ + + + A + + ++ Sbjct: 298 VSGLRRALDEAGHRSVQRPPDSALAMWQTEAVGEAGAFPPAPAAPLPRDGWGPAAPETRV 357 Query: 370 FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 +++ + + P + E + +G+A Q+ + YI+++ DGLV+V Sbjct: 358 MERQSLFAPRPGFMAPPPLARAEAAHAPPPEVRQFPMGVARGQVAKTYIVAEAEDGLVLV 417 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQHAAHERL+ E+MR ++ SQ +L PE+++L E C + E+L G+ ER Sbjct: 418 DQHAAHERLVLERMRAALTGGRVASQAMLIPEVVELDEPACDRLEARAEELAEFGLDLER 477 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 FGP A+ +R PA+L + + L+ D+ DE+ +L++R++++ ATMAC+GS+R+G Sbjct: 478 FGPTAMLVRSTPALLGQSDPKGLVSDLADELAAFDQALSLRERLDHVAATMACHGSVRAG 537 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R + EMN LLREME P+S QCNHGRPT++KL+ DIEKLFGR Sbjct: 538 RILSVAEMNALLREMEVTPHSGQCNHGRPTWVKLQHGDIEKLFGR 582 >gi|329851130|ref|ZP_08265887.1| DNA mismatch repair protein MutL family protein [Asticcacaulis biprosthecum C19] gi|328839976|gb|EGF89548.1| DNA mismatch repair protein MutL family protein [Asticcacaulis biprosthecum C19] Length = 616 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 229/612 (37%), Positives = 359/612 (58%), Gaps = 20/612 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L + IN+IAAGE++ERP+ A+KEL+EN++DA + ++ GG S I DNG G Sbjct: 4 IQRLPQDTINRIAAGEVVERPASAVKELVENAIDAGARHIDIRAEQGGLSRILIEDNGSG 63 Query: 63 MTSEEIPMAVQRHCTSKISD------DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 M ++ +AV+RH TSK+ D +I T GFRGEALPS+G+V+ L ++S+ + Sbjct: 64 MAGPDLELAVERHATSKLKPQADGTWDLLHIQTLGFRGEALPSMGSVARLNIVSKSRGGD 123 Query: 117 T-GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 Q+ + GT +++RDLF+ PARL F+KSE+ E I + ++R Sbjct: 124 ALAIQVDGGAVSGLKPAAFGGDHGTRIDLRDLFYATPARLKFMKSERSENMAIAEEVKRQ 183 Query: 176 AIAYPKVSFTFSTIKSNRYKMNF-QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 A+A+ V F+ K+ Q+ R++ ++G DF +NA+ +++ + L Sbjct: 184 AMAHEDVGFSLELDGKRVLKLFAEQAGFEGRLRRLAAILGSDFGDNALLIDQAREGVRLT 243 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY G+PTF+RGNA Y+F+N R V+DK + +R AYA+ + R+P+ L +EIDP+ Sbjct: 244 GYAGLPTFSRGNAMHQYLFVNNRPVRDKLLTGALRAAYADFLARDRHPLAALFVEIDPQD 303 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK-- 352 +DVNVHPAK+ +RFR+P ++R II +++ + G ++ +++ ++ F ++ Sbjct: 304 LDVNVHPAKAEVRFRDPNLVRGLIIGALKHGLASAGHRAATTVAQTALTGFRVESVQPLL 363 Query: 353 ----------THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 + Y F + + L + E V S Sbjct: 364 NLNRPTPSQIAAVRPYMAPEPFAPTARFEPVSYETAAYALGVSEAPVLERPVDVAASAVD 423 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + LG A AQIH+ YII+QT DGLVIVDQHAAHERL++E+M+ + SQ+LL PEI Sbjct: 424 AFPLGAARAQIHETYIIAQTADGLVIVDQHAAHERLVYEEMKVAMAQGHVQSQSLLIPEI 483 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 +DL E A ++ +DL +G++ E FGP ++ +R+IPA++ +I L+RD++D++ + Sbjct: 484 VDLEREEVARLVARRDDLATMGLQVEAFGPTSVLVRDIPALMGDCDISGLVRDLVDDLTE 543 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 L++R+ I AC S+RSGR++ + EMN LLR+ME P+S QCNHGRPT+++ Sbjct: 544 HGELLALKERMAEICGDHACRHSVRSGRRLNAHEMNALLRQMEATPHSGQCNHGRPTYVE 603 Query: 583 LKLSDIEKLFGR 594 LKL DIEKLFGR Sbjct: 604 LKLKDIEKLFGR 615 >gi|293609402|ref|ZP_06691704.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827854|gb|EFF86217.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 649 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 205/638 (32%), Positives = 339/638 (53%), Gaps = 45/638 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERPS +KEL+ENS+DA ++ + IA GG + +I DNG Sbjct: 10 RIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIVRIAQGGSTLIEIIDNGH 69 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +AV RH TSKI ++D I + GFRGEAL SI AVS LTL S ++ G Sbjct: 70 GIHPDDLALAVMRHATSKIKTAEDLHAIVSLGFRGEALASIAAVSRLTLTSSQDESGIGH 129 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ V+ VA GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 130 QVEVNGTAFDHQEVQAVAAQKGTHIRVQDLFFNVPARRKFLKKPTTEFGHIEEIVRRLAL 189 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + F + R + + +R+ Q++G F+ NA ++ +S + L G+ Sbjct: 190 THFDIRFVLEHNDNIRINLPIADSGELRFQRVQQLLGSQFVQNAYWIDAESISMRLSGWL 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP +DV Sbjct: 250 GHPSDARAQADMQYVYVNGRIVKDKTISHALRMAYDGILHGHQHSSYLLFLEVDPENIDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS------------------- 338 NVHP K IRF N + F+ ++ + + +++ + Sbjct: 310 NVHPTKHEIRFLNQREVHEFVRHYAKETLAQFQTASADLAQAMKADESSDYSVQPQPKYQ 369 Query: 339 -----KKMISSFHQDNAPKTHLPKYA--TSLTNTQEKLFLQENRLSTND----------- 380 + + + D+ +T T ++ K ++ + Sbjct: 370 EQFSLHRANETLNSDSEARTQPAPTELLTDFNASRPKAVHYADQTPKYNGSAQLNNALKT 429 Query: 381 ---LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 L +S + D ++ + LGIA AQ+H YI++Q T+GL+IVD HAAHER Sbjct: 430 YLAPLRDQPTNFSVNEDIEPVAKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHER 489 Query: 438 LIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 ++ ++M+ ++ + TSQ LL P++I + + + E L RLG++ + +G + Sbjct: 490 ILLQQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEELKPQLERLGLEIDLYGDEQVI 549 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R +PAIL K + L+ ++++++ + L + + +LA MAC+G++R+ R++ E Sbjct: 550 VRGVPAILQKADFENLIPELLNDLDPNDEAQGLLQKRDELLAGMACHGAVRAHRQLSLSE 609 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MN LLR+ME+ +SQCNHGRPT+ L ++KLF R Sbjct: 610 MNALLRQMEQTEFASQCNHGRPTWRAFPLPQLDKLFAR 647 >gi|299822954|ref|ZP_07054840.1| DNA mismatch repair protein MutL [Listeria grayi DSM 20601] gi|299816483|gb|EFI83721.1| DNA mismatch repair protein MutL [Listeria grayi DSM 20601] Length = 605 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 191/605 (31%), Positives = 307/605 (50%), Gaps = 17/605 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L+E + N+IAAGE++ERP+ +KEL EN++DA S+ ++ +I G + + DNG Sbjct: 4 KIVELTELLSNKIAAGEVVERPASVVKELTENAIDAGSTVIDILIEEAGLNKITVIDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A RH TSKI + D +HT GFRGEALPSI +V+ + + + G Sbjct: 64 GIEPEDVETAFLRHATSKIKNEHDLFRVHTLGFRGEALPSIASVAQVKITTST-GEKQGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G KI GT +EV LF+ PARL +LKS E ITD+I R+A+++ Sbjct: 123 HLTIQGGKILEEISSDARKGTEIEVTQLFYNTPARLKYLKSLPTELGNITDIINRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF S + S NG+ + I+ + G A+ ++ +S + + GY + Sbjct: 183 PEISFRLSHNGK---SLLQTSGNGDLRQVIAAIYGVSIARKALPVSAESLDFKVNGYAIL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P NR N N + +NGR +++ ++ I+ Y +P+GRYP++VL +E+DP VDVNV Sbjct: 240 PEINRANRNYVSMIVNGRYIKNFALVKAIQEGYHTLLPIGRYPIIVLQIEMDPIIVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH---------QDNA 350 HPAK +R + I Q ++ A +++ + S +SKK + Q Sbjct: 300 HPAKLEVRLSKEKELGQLIAQMLKGAFHQQQLIPSGEVSKKQKLASEQLQIDFDKKQSEP 359 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTN-DLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 P+ P + +EN L + D L E+ + V + Sbjct: 360 PRLDQPFHYKQPPEQDNSYVAEENALYESLDALLDRPEEKQEEQEEVTITPTERLPKLYP 419 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q+H YI++Q GL I+DQHAA ER+ +E R+ Q LL P +++ E Sbjct: 420 IGQMHATYILAQNEKGLYIIDQHAAQERIKYEFYREKIGEVARELQDLLVPIVLEFSTDE 479 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 + E + L +G+ E FG N+ IR P K + LR+IIDE +++ + ++ Sbjct: 480 YVRLEEQKQKLEEVGVFLESFGQNSYIIRSHPNWFPKDQEEETLREIIDEALNAP-SISI 538 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 E+ M+C SI++ + +M LL + + + C HGRP I+ ++E Sbjct: 539 HKLREDTAIMMSCKKSIKANHYLTKEDMEALLDTLREASDPFTCPHGRPVVIEYTTYELE 598 Query: 590 KLFGR 594 K+F R Sbjct: 599 KMFKR 603 >gi|262370364|ref|ZP_06063690.1| DNA mismatch repair ATPase [Acinetobacter johnsonii SH046] gi|262314706|gb|EEY95747.1| DNA mismatch repair ATPase [Acinetobacter johnsonii SH046] Length = 646 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 210/636 (33%), Positives = 350/636 (55%), Gaps = 43/636 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L+ + NQIAAGE+IERP+ +KEL+ENS+DA ++ + + GG + +I DNG Sbjct: 9 RIHTLNPALANQIAAGEVIERPASVVKELLENSIDAGATELIIRVEQGGSTLIEIMDNGR 68 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++P+AV RH TSKI ++D I + GFRGEAL SI AVS LTL S + G Sbjct: 69 GIHAEDLPLAVMRHATSKIQTAEDLHAIVSLGFRGEALASIAAVSRLTLTSSQVDDGIGY 128 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ ++ VA GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 129 QVEVNGTAFDRQEIQAVAAPKGTHIRVQDLFFNVPARRKFLKKPGTEFGHIEEIVRRLAL 188 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + F +S + + + +R+ Q++G F NA ++ S + L G+ Sbjct: 189 THFDIRFVLEHNQSIKLNLPIADSGELRFQRVQQLLGRAFTENAYWMDADSINMRLTGWL 248 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP +DV Sbjct: 249 GHPSDARAQADLQYVYVNGRIVKDKTISHALRMAYDGILHGHQHAGYLLFLEVDPENIDV 308 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------------------- 335 NVHP K IRF N + F+ ++ +++ +T+ Sbjct: 309 NVHPTKHEIRFLNQREVHEFVRHYAKETLSQFQTATADLSDAMKIAENQASMSVQPRYQE 368 Query: 336 --VLSKKMISSFHQDNAPKTHLPKYATSLT-----NTQEKLFLQENRLST---------N 379 L +++ S+ + AP L +++S + Q + +L+ Sbjct: 369 PLQLHRRVESAQTGEQAPSDVLTDFSSSQPQGVHYSAQPSRYQGSQQLNNALQSYLAPLR 428 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 D + D S + V+ ++ + LGIA AQ+H Y+++Q T+GL+IVD HAAHER++ Sbjct: 429 DASSAVDQAQSLADFTVQSTKVDEHPLGIAIAQLHGIYVLAQNTEGLIIVDMHAAHERIL 488 Query: 440 FEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 ++M+ ++ + TSQ LL P++I++ + + E + L RLG++ +++G + +R Sbjct: 489 LQQMKSAWDKPEFWTSQQLLIPKVINITRMQAIRVEELKDQLARLGLEIDQYGDEQVIVR 548 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 +PAIL K N L+ ++++++ + L + + ILA MAC+G++R+ R + EMN Sbjct: 549 GVPAILHKANFEALVPELLNDLDPNDEAQGLLQKRDQILAGMACHGAVRAHRILGLSEMN 608 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LLR+ME+ +SQCNHGRPT+ L+ ++KLF R Sbjct: 609 ALLRQMEQTEFASQCNHGRPTWRAFPLAQLDKLFAR 644 >gi|39997099|ref|NP_953050.1| DNA mismatch repair protein [Geobacter sulfurreducens PCA] gi|81832022|sp|Q74BP0|MUTL_GEOSL RecName: Full=DNA mismatch repair protein mutL gi|39983989|gb|AAR35377.1| DNA mismatch repair protein MutL [Geobacter sulfurreducens PCA] gi|298506112|gb|ADI84835.1| DNA mismatch repair protein MutL [Geobacter sulfurreducens KN400] Length = 606 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 200/606 (33%), Positives = 324/606 (53%), Gaps = 17/606 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N+IAAGE++ERP+ +KEL+EN+LDA + I GGG+ +ITD+G Sbjct: 4 RIRILPEILTNKIAAGEVVERPASVVKELVENALDAGCGEIIVEIEGGGRRLIRITDDGC 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E+ MA++RH TSKI+ DD ++ T GFRGEALPS+ +VS TL +R + G Sbjct: 64 GMSREDALMALERHATSKIATDDDLFSLATLGFRGEALPSVASVSRFTLATRERGSIEGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I G KI V+ M GT+V VR+LFF PARL F+KS + E + D++ R+A++ Sbjct: 124 EIYAEGGKIREVKACGMAEGTVVSVRNLFFNTPARLKFMKSVETEGGHVADLVTRLALSR 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V FT + F++ +G +R++ ++G+ + ++ + + + G Sbjct: 184 PEVRFTCVSDGKT----LFRALDGTLLDRVAALLGKTVASALHPVDLATEGVRVTGLVAR 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R A+ Y +INGR ++D+ + I AY + GRYPVVVL +E+ P +VDVNV Sbjct: 240 PDVSRSAASHLYTYINGRFIRDRVVQHAILQAYRNFLERGRYPVVVLFIEVSPGEVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 HP K +RFR I+ + I ++++ + + S ++ + Q T + Sbjct: 300 HPTKHEVRFRQQGIVHDVIQGAVEETLRLTPWIRRSESPVAAPLAVPRPQQYVQGTGARQ 359 Query: 358 YAT---------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 LF + + P D +D ++ Sbjct: 360 VEEVRELLENYRPAVAPHRPLFAPQPAPQPDREPPLPDSGSRMLDDTAVRRHGGYFSSLA 419 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 Q + +YI+ Q LVI+DQHAAHER+ FE+++ F + ++ Q LL PE ++L Sbjct: 420 VIGQYNASYILCQDGSDLVIIDQHAAHERVAFERLKTQFAAGRVEGQGLLFPETVELSHR 479 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 E A++ EH +L RLG E FG ++ IP +L+ + +LLRD ++E+ + + Sbjct: 480 ESAVVREHGGELGRLGFDLEDFGGTTWIVKGIPRLLAGTDYLRLLRDTLEELQSLGASRS 539 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 + D +E+IL +AC+ +R + + E+ L M+ S+ C HGRP +L L ++ Sbjct: 540 IADAVEDILTRVACHSVVRGEHPLTTGEIEALFAHMDATDFSTNCPHGRPVLQRLTLGEV 599 Query: 589 EKLFGR 594 EK+F R Sbjct: 600 EKMFKR 605 >gi|260587681|ref|ZP_05853594.1| DNA mismatch repair protein MutL [Blautia hansenii DSM 20583] gi|331084030|ref|ZP_08333137.1| hypothetical protein HMPREF0992_02061 [Lachnospiraceae bacterium 6_1_63FAA] gi|260541946|gb|EEX22515.1| DNA mismatch repair protein MutL [Blautia hansenii DSM 20583] gi|330402392|gb|EGG81962.1| hypothetical protein HMPREF0992_02061 [Lachnospiraceae bacterium 6_1_63FAA] Length = 636 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 180/636 (28%), Positives = 296/636 (46%), Gaps = 47/636 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI LS+ I++IAAGE++ERP+ +KEL+EN++DA ++ + I GG SF ++TDNG Sbjct: 3 KIAVLSQNTIDKIAAGEVVERPASVVKELVENAIDAGATAITVEIKEGGISFIRVTDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A RH TSKI ++D I + GFRGEAL SI AVS + ++++ P++ G Sbjct: 63 GIPKEQVPLAFLRHATSKITQAEDLLQITSLGFRGEALSSISAVSQMEVITKAPEDFMGV 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G + + V GT + VR+LFF PAR FLK+ E ++ + ++A+++ Sbjct: 123 RYVIEGGQEKVLEDVGAPNGTTMLVRNLFFNTPARKKFLKTAMTEAGYVSSYMEQLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 +SF + R S N N + I + G D + + + + +++ G+ G Sbjct: 183 HNISFKYMVNGQLRLH---TSGNANLKDVIYGIYGRDITRELLPVQYEVSGLSVSGFIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ RGN N +INGR V+ K ++ I AY + +YP V L +I VDVNV Sbjct: 240 PSIARGNRNFENYYINGRYVKSKLLMKAIEEAYKPYMMQHKYPFVCLQYDIHGEDVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST------------------------SS 335 HP K +RF+N + I N I A+ K I Sbjct: 300 HPTKMEVRFKNQSAIYNATYDLITDALAGKEIIPEVSLTPKPAVGEKQAQIKEEKIPVPE 359 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 K I+ AP P A T ++ + + + P + Sbjct: 360 PFEKNRIAEEKPVYAPVGLRPASAEPKTESKAEPINVNEPIKPTEPEIQAKPEEQKKEAF 419 Query: 396 VEESEATH-----------------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 +E +A Q+ Y + + + I+DQHAAHE++ Sbjct: 420 PKEKQAVEKAEQLELFDNRLLSKEARIHHRIIGQLFDTYWLVEYDNKFYIIDQHAAHEKV 479 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 ++E+ ++F +I SQ + P +I L E L+ + E G + FG +I Sbjct: 480 LYERFLKEFAKKEILSQMISPPSLISLNLQESNLLKANLEIFREFGFEISEFGGKEYSIH 539 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 +PA + ++ +L I+D + + D + +AT AC +++ ++ E + Sbjct: 540 AVPANIYGVSVQELFIQILDSL-EQEHVSKTPDILAERIATAACKAAVKGNNRLSVKEAD 598 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L+ E+ N C HGRPT I + ++EK F R Sbjct: 599 ALIDELLSLENPYNCPHGRPTIISMTKYELEKKFKR 634 >gi|299769558|ref|YP_003731584.1| DNA mismatch repair ATPase [Acinetobacter sp. DR1] gi|298699646|gb|ADI90211.1| DNA mismatch repair ATPase [Acinetobacter sp. DR1] Length = 649 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 208/638 (32%), Positives = 344/638 (53%), Gaps = 45/638 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERPS +KEL+ENS+DA ++ + IA GG + +I DNG Sbjct: 10 RIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIVRIAQGGSTLIEIIDNGH 69 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ SE++ +AV RH TSKI ++D I + GFRGEAL SI AVS LTL S ++ G Sbjct: 70 GIHSEDLALAVMRHATSKIKTAEDLHAIVSLGFRGEALASIAAVSRLTLTSSQDESGIGH 129 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ V+ VA GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 130 QVEVNGTAFDHQEVQAVAAQKGTHIRVQDLFFNVPARRKFLKKPTTEFGHIEEIVRRLAL 189 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + F + R + + +R+ Q++G F+ NA ++ +S + L G+ Sbjct: 190 THFDIRFVLEHNDNIRINLPIADSGELRFQRVQQLLGSQFVQNAYWMDAESISMRLSGWL 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP +DV Sbjct: 250 GHPSDARAQADMQYVYVNGRIVKDKTISHALRMAYDGILHGHQHSSYLLFLEVDPENIDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS------------------- 338 NVHP K IRF N + F+ ++ +++ +++ + Sbjct: 310 NVHPTKHEIRFLNQREVHEFVRHYAKETLSQFQTASADLAQAMKVDEQSDYSVQPQPKYQ 369 Query: 339 -----KKMISSFHQDNAPKTHLPKYA--TSLTNTQEKLFLQENRLSTND----------- 380 + + + D+ P+T T ++ + ++ + Sbjct: 370 EQFSLHRANETLNADSEPQTQHAPTELLTDFNASRPQAVHYADQTPKYNGSAQLNNALKT 429 Query: 381 ---LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 L T+S + + ++ + LGIA AQ+H YI++Q T+GL+IVD HAAHER Sbjct: 430 YLAPLRDQPATFSLNENIEPVTKFDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHER 489 Query: 438 LIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 ++ ++M+ ++ + TSQ LL P++I + + + E L RLG++ + +G + Sbjct: 490 ILLQQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEELKPQLERLGLEIDLYGDEQVI 549 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R +PAIL K + L+ ++++++ + L + + +LA MAC+G++R+ R++ E Sbjct: 550 VRGVPAILQKADFENLIPELLNDLDPNDEAQGLLQKRDELLAGMACHGAVRAHRQLSLSE 609 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MN LLR+ME+ +SQCNHGRPT+ LS ++KLF R Sbjct: 610 MNALLRQMEQTEFASQCNHGRPTWRAFPLSQLDKLFAR 647 >gi|89100700|ref|ZP_01173556.1| DNA mismatch repair protein [Bacillus sp. NRRL B-14911] gi|89084575|gb|EAR63720.1| DNA mismatch repair protein [Bacillus sp. NRRL B-14911] Length = 640 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 183/642 (28%), Positives = 299/642 (46%), Gaps = 55/642 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + + N+IAAGE++ERP+ +KEL+ENS+DA S+ +E G + +I DNG Sbjct: 3 KIVQLDDALSNKIAAGEVVERPASVVKELVENSIDAGSTIIEIDAEEAGLAKIRIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A QRH TSKI D D I T GFRGEALPSI +VS L L + G Sbjct: 63 GIEEDDVMTAFQRHATSKIKDENDLFRIRTLGFRGEALPSIASVSRLELKTSTGDA--GT 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G K++ A GT + + DLF+ PARL ++K+ E ITDV+ R+A+A+ Sbjct: 121 RILIEGGKVAEFEKAASRKGTDITISDLFYNTPARLKYMKTIHTELGNITDVVNRLALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF K+ + NGN + ++ + G + + + + S + + GY + Sbjct: 181 PEVSFRLVHNGR---KLLHTAGNGNVQQVLASIYGMNIVKKMIPVEASSLDFHVHGYIAL 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ ++ I+ Y +P+GRYP+V+L +++DP VDVNV Sbjct: 238 PEITRASRNYISTMINGRFIKNYPLVKAIQEGYHTLLPIGRYPIVLLNVQMDPLLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------FHQDNAPKT 353 HP+K +R + + +I++ + + + + + F D+ P+ Sbjct: 298 HPSKMEVRLSKEHELNELVAGTIKEVFKSQELIPAGFAPARAETPKSEQTFFELDHLPEK 357 Query: 354 HLPKYATSLTNTQEK-----------------------------------------LFLQ 372 + + + F Sbjct: 358 EMEYKEQAQNRQNDSRQAPSESGQPMFIKEEIAVRQHEEAPAFKPQDLLRTDSMAFPFKA 417 Query: 373 ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 E + L D+ E E S Q+H YI++Q GL ++DQH Sbjct: 418 EQPAESQAFLEDDEEEVIEGTAEPEASAVHRVPPLYPIGQMHGTYILAQNDRGLYVIDQH 477 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AA ER+ +E R + Q +L P + E I EH +L ++GI E FG Sbjct: 478 AAQERIKYEYFRDKVGQVESELQEMLVPLTFEYPADEYIKINEHIAELEKVGIFLEHFGQ 537 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 N +R P K Q++ D+I++++ ++ E M+C SI++ + Sbjct: 538 NTFIVRSHPQWFPKGEEQQIIEDMIEQVLSMKKAD-VKKLREEAAIMMSCKASIKANHHL 596 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ E+ LL + K+ + C HGRP I ++EK+F R Sbjct: 597 RNDEIQALLDMLRKSSDPFTCPHGRPIIIHYSTYEMEKMFKR 638 >gi|153954200|ref|YP_001394965.1| hypothetical protein CKL_1575 [Clostridium kluyveri DSM 555] gi|219854808|ref|YP_002471930.1| hypothetical protein CKR_1465 [Clostridium kluyveri NBRC 12016] gi|146347081|gb|EDK33617.1| MutL [Clostridium kluyveri DSM 555] gi|219568532|dbj|BAH06516.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 609 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 195/609 (32%), Positives = 326/609 (53%), Gaps = 20/609 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L N+IAAGE++E PS +KEL+ENS+D+ + + I GG+ ++ D+G Sbjct: 3 RINLLDMDTSNKIAAGEVVEGPSSVVKELLENSIDSGAKNITIEIEDGGQKSIRVIDDGV 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G+ E++ A H TSKIS +D + I+T GFRGEAL SI AVSH+ L S+ N G Sbjct: 63 GIHPEDVEKAFMPHATSKISTLEDLNKIYTMGFRGEALSSIAAVSHVILRSKVKDEFNYG 122 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I+ISG ++ ++ N GT V V+DLFF +PAR FLKS E +LI+D+I R+++A Sbjct: 123 REISISGGVLNYIQDTGCNIGTTVLVKDLFFNVPARKKFLKSPGREGSLISDIINRLSLA 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P + F F K +G + I + G++ N + + S+ ++ GY G Sbjct: 183 NPNIVFKFFRDGK---KSLVTYGSGEVMDVIRCIYGKNIYENIIPIENHSDIASIYGYIG 239 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +RG+ N +F+N R V+DK I + + A+ + + ++P VL L++ P VD+N Sbjct: 240 NSEVSRGSRNNQSIFVNRRYVKDKSITAAVEKAFKSFLTVNKFPFFVLFLDLFPEFVDIN 299 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK I+F + +I F+ +I +A+ + + + + ++ + +T+ + Sbjct: 300 VHPAKWEIKFSDSRMIFKFVFDTIHQALRESLKDSFKIDIIEDKILEKEEESVQTNKIQI 359 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED-------------NDPVEESEATHYQ 405 L + + +++E + + Y ND ++ES+ + Sbjct: 360 PIDLRSPIYESYIKEEYGNNEKQEDNISFEYGNTLEGGNTAEENVRLNDSLKESKISKLP 419 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 Q + YII++ L I+DQHAAHE+++FEK + + ++ SQ L+T +++L Sbjct: 420 PFKMIGQFNNTYIIAEAASNLYIIDQHAAHEKILFEKYKSNIEKKEVISQILITSVVMEL 479 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 + A +E+ + + G E FG N I +RE+P IL K +I L DIID + + + Sbjct: 480 TNDDYACYVENKDVFKKAGFNIELFGNNTINVREVPVILGKPDIKNLFTDIIDNLKNMGS 539 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 T++ + +I AT+AC +I++ + +EM LL E+ + C HGRPT +K L Sbjct: 540 GDTVEVKYLSI-ATLACRAAIKAKHNLSQVEMEHLLHELGFLEDPFTCPHGRPTIVKFTL 598 Query: 586 SDIEKLFGR 594 +D+EK F R Sbjct: 599 NDLEKKFKR 607 >gi|78223260|ref|YP_385007.1| DNA mismatch repair protein [Geobacter metallireducens GS-15] gi|78194515|gb|ABB32282.1| DNA mismatch repair protein MutL [Geobacter metallireducens GS-15] Length = 622 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 195/600 (32%), Positives = 317/600 (52%), Gaps = 16/600 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N+IAAGE++ERP+ +KEL+ENSLDA + I GG+ ++TD+G Sbjct: 32 QIRILPENLTNKIAAGEVVERPASVVKELVENSLDAGCRDIIVEIEAGGRRLIRVTDDGS 91 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E+ ++++RH TSKI+ DD ++ T GFRGEALPSI +VS +L +R G Sbjct: 92 GMSREDALLSLERHATSKIASDDDLFSLCTLGFRGEALPSIASVSRFSLATRQRGAIEGT 151 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I G +I V+ M GT++ VR+LFF PARL F+KS + E + D++ R+AI+ Sbjct: 152 EIYAEGGRIKEVKACGMAEGTVITVRNLFFNTPARLKFMKSAETEAGHVGDLLTRLAISR 211 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V FT+ ++ + NG ER++ ++G L+ +T++G Sbjct: 212 PEVRFTYVNDGKTVFR----ALNGTMEERVAALLGRTIAGALYPLDSTVEGVTVRGLVAR 267 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R A Y FINGR ++D+ + + AY + GRYPVVVL +++ VDVNV Sbjct: 268 PDVSRSAAGHLYTFINGRFIRDRVVQHAVLQAYRNFLERGRYPVVVLFIQVPAGDVDVNV 327 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RFR ++ + I I++A+ + L K+ S+ + + Sbjct: 328 HPTKHEVRFRQQGVVHDVIQGVIEEAL-----RPTPWLRKESQSTVSSPPPERREPATSS 382 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA-----CAQIH 414 + +E L + + P D E G Q H Sbjct: 383 ERVAEVRELLVNYRPSPAPSRPFFQPLPAVVPAPDQSAEEPDRPMDRGYFSRLAIIGQFH 442 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +YI+ Q LVI+DQHAAHER+ FE+++ F + + Q LL P+ ++L E A + Sbjct: 443 ASYILCQDGSDLVIIDQHAAHERVAFERLKAQFAAGGVEGQGLLFPDTLELSHREVAELR 502 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 EH E+L R+G + FG ++ +P +L+ K+ ++LRD ++E ++ D +E Sbjct: 503 EHGEELRRIGFDLDEFGGTTWVVKGVPRLLAGKDYLRILRDTLEEFQAVGANRSVADAVE 562 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 IL +AC+ +R + + ++ L +M+ S+ C HGRP +L L+++E++F R Sbjct: 563 EILTRIACHSVVRGEHPLTTAQIEALFAQMDATDYSTNCPHGRPVLQRLTLAEVERMFKR 622 >gi|226939940|ref|YP_002795013.1| DNA mismatch repair protein [Laribacter hongkongensis HLHK9] gi|226714866|gb|ACO74004.1| MutL [Laribacter hongkongensis HLHK9] Length = 662 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 202/662 (30%), Positives = 328/662 (49%), Gaps = 73/662 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++L + ++NQIAAGE++ERP+ A+KEL+ENSLDA + ++ +AGGG ++ D+G Sbjct: 3 RIQRLPDHLVNQIAAGEVVERPASALKELLENSLDAGARAIQIELAGGGIRLIRVADDGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +++ +A+ RH TSKI D+ + T GFRGE L SI AVS LTL SR + Sbjct: 63 GMPPDDLALALDRHATSKIHSLDELEAVATLGFRGEGLASIAAVSRLTLTSRTADAPHAS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I+ + ++ P A + GT V V DL+F PAR FLKSE E V+ R+A+A+ Sbjct: 123 EISAEDGVLGTLGPAARDTGTTVSVADLYFNTPARRKFLKSESTEYGHCAQVVERLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P F ++ ER+ ++G+DF+ A+ L ++ + L+G+ Sbjct: 183 PHTGFVLKHNGKTTLNRPAET----LAERVGALLGKDFLEVALPLEAEAGPLRLRGFVAA 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ ++ + F+NGR V+D+ +R AY + + L R P VL LE+ P +VDVNV Sbjct: 239 PSLSKTGREAQHAFVNGRFVRDRVFSHAVRQAYRDVLHLERQPCYVLFLELPPAEVDVNV 298 Query: 300 HPAKSYIRFRNPTI--------IRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 HP K +RFR + + S ++ + +T ++ QD+ P Sbjct: 299 HPTKIEVRFRESQAIHQFVFHAVNRVLAASRTQSAGQPEPATRIADTRLEPRLPEQDDTP 358 Query: 352 --------------KTHLPKYATSLTNTQEKL---------------------------- 369 +P+ + S + Sbjct: 359 LADAGTATVLPSPVAADMPRPSFSYPTAPPRPATHRVNDHGAGLDAYRLLFGDLPAAPAP 418 Query: 370 --------------FLQENRLSTNDLLPSDDPTYSEDNDPVE---ESEATHYQLGIACAQ 412 F +R D V A LG A AQ Sbjct: 419 RQTPATPPATAPLDFGAPSRAGAQAPAARADSAPLPAEASVPAAGHESAPVPPLGFAVAQ 478 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +H Y+++Q GLVIVD HAAHER+++E++++ F+ + SQ LL P + + AL Sbjct: 479 LHGIYVLAQNARGLVIVDMHAAHERIVYERLKRAFDRDGLPSQPLLMPLAFEADALQQAL 538 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 EH + L RLGI+ + ++ I+ +PA+L++ + L+R ++ ++ T + R Sbjct: 539 AQEHADALARLGIQLDAPSRGSLTIKAVPAMLAQADAVALVRGVLADLEQHGATDAVDAR 598 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 + +LA+MAC+G++R+ R + EMN LLR+ME + QCNHGRPT+ +L +++++ LF Sbjct: 599 RDALLASMACHGAVRAHRPLTLPEMNALLRDMEATERADQCNHGRPTWRELSMTELDALF 658 Query: 593 GR 594 R Sbjct: 659 LR 660 >gi|331091140|ref|ZP_08339982.1| hypothetical protein HMPREF9477_00625 [Lachnospiraceae bacterium 2_1_46FAA] gi|330405362|gb|EGG84898.1| hypothetical protein HMPREF9477_00625 [Lachnospiraceae bacterium 2_1_46FAA] Length = 638 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 183/639 (28%), Positives = 307/639 (48%), Gaps = 48/639 (7%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I+ L + I++IAAGE+IERP+ +KEL+EN++DA ++ V I GG SF +ITDN Sbjct: 1 MPNIQVLDQITIDKIAAGEVIERPASIVKELVENAIDANATAVTVEIKEGGISFIRITDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ EE+ +A RH TSKI D + + + GFRGEAL SI A++ + ++++ +N+ Sbjct: 61 GCGIPKEEVSLAFLRHSTSKIRSEKDLATVSSLGFRGEALSSISAIAQVEVITKTKENDF 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G S+ V GT V +F+ PAR FLK+ E + + +++ R+A+ Sbjct: 121 GVKYTIEGGVEKSIEEVGAPDGTTFLVHQIFYNTPARRKFLKTPMTEASHVNELMVRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P+VS F ++ + NG + I V G + NN +E+N ++ + GY Sbjct: 181 SHPEVSIQFINNGQSKLH---TAGNGKVKDVIYHVFGREIANNLLEVNRDEGKMRVSGYI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P +RGN N +INGR V+ I I AY + +YP VL +D +DV Sbjct: 238 GKPLISRGNRNYENYYINGRYVKSNIIAKAIEDAYKDFTMQHKYPFTVLHFWLDGNDIDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST---------SSVLSKKMISSFHQD 348 NVHP K +RF + + +F+ +++++ + + + + +K + H + Sbjct: 298 NVHPTKMELRFSHRQEVYDFVYRAVKETLIEPELIPRVEISKPTEEKNVPEKKVPEVHDE 357 Query: 349 NAPKTHLPKYATSLTNTQEKLFL-------------------------QENRLSTNDLLP 383 + + S + + +E + + Sbjct: 358 AYFMKKMRERVQSYHRQASQAEVKDTTELHRGNLQIDRIKEAVTYNKNREREERSAQPVM 417 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIA--------CAQIHQNYIISQTTDGLVIVDQHAAH 435 E+ +L Q+ Y + + + L I+DQHAAH Sbjct: 418 QPAQPDMSQEMKAEQLNFFEEKLLTKKAVQEYKLIGQVFDTYWLVEFQEQLYIIDQHAAH 477 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 ER+++EK TSQ L P I++L E L+ EH + ++G + E FG ++ Sbjct: 478 ERVLYEKTLHGMKDRTFTSQYLSPPIILNLSMQEARLLTEHMDLFSKIGFEIENFGGDSF 537 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 A+R +P L +LL +++D + D T+ D I +A M+C +++ K+ S Sbjct: 538 AVRAVPDNLFSIAKKELLMEMLDNLSDDITSAEAPDLIGEKIAAMSCKAAVKGNAKLSSA 597 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 E+N L+ E+ + N C HGRPT I + ++EK F R Sbjct: 598 EVNALIGELLELENPYHCPHGRPTIIAMTKRELEKKFKR 636 >gi|315658412|ref|ZP_07911284.1| DNA mismatch repair protein HexB [Staphylococcus lugdunensis M23590] gi|315496741|gb|EFU85064.1| DNA mismatch repair protein HexB [Staphylococcus lugdunensis M23590] Length = 637 Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats. Identities = 172/638 (26%), Positives = 310/638 (48%), Gaps = 50/638 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA+++ + + G S ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDADATEINVEVEESGISSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ + RH TSK+ DD +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEADDLDLVFHRHATSKLHDDDDLFHIRTLGFRGEALASISSVAKVTLTTCT-DNEQGH 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I +I +P GT V+V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYAENGQIVHKKPAKARKGTDVKVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + F+ + + N +G E ++ + G + V + +++ ++GY Sbjct: 182 PDIRFSLVSDGKIMLQTN---GSGKTNEVMADIYGMKVARDLVHITGDTSDYHIEGYVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GRYP+ + +++DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFILNKAIVEGYHTLMMIGRYPICYINIKMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM-----ISSFHQDNAPKTH 354 HP K +R + I++ I++A + + + + +K + +F Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVEKIREAFHDRILIPQNKWDEKPKKNKVLHTFEQQQMDFEK 358 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSD-----DPTYSEDNDP-------------- 395 + S + E+ + + +T+D + D TY++ N Sbjct: 359 QRQNTNSNDTSSERPSNELEQTTTSDDFNEETVQPVDSTYNKRNSNDDYFERQKEFLSEL 418 Query: 396 -------------------VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 V ++ + Q+H YII+Q +G+ ++DQHAA E Sbjct: 419 ENSTSSNSSLLEQEDIKGTVSKTPSRRVPYMEIVGQVHGTYIIAQNENGMFMIDQHAAQE 478 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R Q LL P + E +I ++ +L ++G+ E FG + Sbjct: 479 RIKYEYFRDKIGEVTNEVQDLLIPMTFHFSKDEQIIINQYQSELDKVGVHLEHFGGSDYI 538 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 + P L K ++ +++D+I+ +++ ++ E+ M+C SI++ ++ E Sbjct: 539 VNSYPVWLPKADVEDIIKDMIELVLEHKKID-IKKLREDAAIMMSCKKSIKANHYLKINE 597 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M L+ ++ K + C HGRP I ++EKLF R Sbjct: 598 MADLIDQLRKAEDPFTCPHGRPIIINFSNYELEKLFKR 635 >gi|30263774|ref|NP_846151.1| DNA mismatch repair protein [Bacillus anthracis str. Ames] gi|47529193|ref|YP_020542.1| DNA mismatch repair protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49186618|ref|YP_029870.1| DNA mismatch repair protein [Bacillus anthracis str. Sterne] gi|65321094|ref|ZP_00394053.1| COG0323: DNA mismatch repair enzyme (predicted ATPase) [Bacillus anthracis str. A2012] gi|165872424|ref|ZP_02217059.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0488] gi|167639830|ref|ZP_02398099.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0193] gi|170706899|ref|ZP_02897357.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0389] gi|177652043|ref|ZP_02934589.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0174] gi|190568430|ref|ZP_03021337.1| DNA mismatch repair protein MutL [Bacillus anthracis Tsiankovskii-I] gi|227813324|ref|YP_002813333.1| DNA mismatch repair protein MutL [Bacillus anthracis str. CDC 684] gi|229604532|ref|YP_002868010.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0248] gi|254735808|ref|ZP_05193514.1| DNA mismatch repair protein [Bacillus anthracis str. Western North America USA6153] gi|254751062|ref|ZP_05203101.1| DNA mismatch repair protein [Bacillus anthracis str. Vollum] gi|254759380|ref|ZP_05211405.1| DNA mismatch repair protein [Bacillus anthracis str. Australia 94] gi|81837840|sp|Q81WR4|MUTL_BACAN RecName: Full=DNA mismatch repair protein mutL gi|254766156|sp|C3P5H4|MUTL_BACAA RecName: Full=DNA mismatch repair protein mutL gi|254766157|sp|C3L823|MUTL_BACAC RecName: Full=DNA mismatch repair protein mutL gi|30258418|gb|AAP27637.1| DNA mismatch repair protein MutL [Bacillus anthracis str. Ames] gi|47504341|gb|AAT33017.1| DNA mismatch repair protein MutL [Bacillus anthracis str. 'Ames Ancestor'] gi|49180545|gb|AAT55921.1| DNA mismatch repair protein MutL [Bacillus anthracis str. Sterne] gi|164711862|gb|EDR17404.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0488] gi|167512231|gb|EDR87608.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0193] gi|170128317|gb|EDS97186.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0389] gi|172082412|gb|EDT67477.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0174] gi|190560434|gb|EDV14412.1| DNA mismatch repair protein MutL [Bacillus anthracis Tsiankovskii-I] gi|227007230|gb|ACP16973.1| DNA mismatch repair protein MutL [Bacillus anthracis str. CDC 684] gi|229268940|gb|ACQ50577.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0248] Length = 626 Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats. Identities = 184/627 (29%), Positives = 300/627 (47%), Gaps = 39/627 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM---------ISSFHQDNA 350 HPAK +RF + I +++Q A K + + ++ K F Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 351 PKTHLPK-----------------------YATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + +P+ + S E+ +E +N+ + Sbjct: 359 KEPSMPEIVLPTGMDEKQEEPQAVKQPTQLWQPSTKPIIEEPIQEEKSWDSNEEGFELEE 418 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 E Q+H YI +Q GL ++DQHAA ER+ +E R Sbjct: 419 LEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGLYMIDQHAAQERINYEYFRDKV 478 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 Q LL P IDL E + E E+L ++G+ E+FG + +R P K Sbjct: 479 GRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLFLEQFGHQSFIVRSHPTWFPKG 538 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 +++ +++++++ ++ E M+C SI++ + + + ++ LL E+ Sbjct: 539 QETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASIKANQYLTNDQIFALLEELRTT 597 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N C HGRP + ++EK+F R Sbjct: 598 TNPYTCPHGRPILVHHSTYELEKMFKR 624 >gi|218132527|ref|ZP_03461331.1| hypothetical protein BACPEC_00386 [Bacteroides pectinophilus ATCC 43243] gi|217992637|gb|EEC58639.1| hypothetical protein BACPEC_00386 [Bacteroides pectinophilus ATCC 43243] Length = 644 Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats. Identities = 187/645 (28%), Positives = 303/645 (46%), Gaps = 54/645 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + IN+IAAGE+IERP+ +KEL EN++DA ++ V I GG SF +ITDNG Sbjct: 1 MPIQILDQNTINKIAAGEVIERPASVVKELAENAIDAMATAVTIEIKDGGISFIRITDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EIPMA RH TSKI +D + + GFRGEAL SI AV+ + L+++ + TG Sbjct: 61 CGIDKGEIPMAFLRHSTSKIKSVEDLMCVRSLGFRGEALSSIAAVAQIELITKTKEAFTG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + I G K ++ + GT VR+LF+ P R FLK+ E ++ ++ +A + Sbjct: 121 VRYVIEGGKEQNMEDIGAPDGTTFIVRNLFYNTPVRRKFLKTATTEAGYVSALVEHLAFS 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P+VSF F N+ + S NG+ + I V G D N +E++ K+ +I + G+ G Sbjct: 181 HPEVSFRFINNGQNKL---YTSGNGSLKDIIYHVNGRDIATNLLEVSAKTQDIQISGFIG 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P +RGN FINGR ++ I I Y I +YP L I+ +DVN Sbjct: 238 KPMISRGNRTYENYFINGRYIKSNIITRAIEEGYKGYIMQHQYPFTALHFTIEQSIIDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K +RF + +F++ +I+ ++ + + LS+ ++ + K Sbjct: 298 VHPTKMELRFSQNEFVYDFVLNAIRNTLSGRELVPEVRLSRSENVPVNKTRPAEPFEVKR 357 Query: 359 ATS----------------------------LTNTQEKLFLQENRLST------------ 378 + +++T L+E+ Sbjct: 358 MAAEAEKDKKNSTAGLTAALAATGHTLRQAYVSDTIRPKQLREDPAEYKTTAAIEPSAAP 417 Query: 379 ---------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + L E + + + Q+ Y I Q D + I+ Sbjct: 418 AARPPEAPVTETLQKSASPAPEQLSLITPDDTASIPKPVLVGQVFDTYWIIQFEDKMFIM 477 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQHAAHE++++E+ S I +Q + P I+ L E ++ ++ + RLG + E Sbjct: 478 DQHAAHEKILYERTMHRLESGSIDTQIIAPPVILSLNMREKEVVSQNIDIFTRLGFEIES 537 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 FG N + +PA L + +LL DIID +++ + + I +A+M+C +++ Sbjct: 538 FGGNEYKVTGMPATLPSLDDRELLMDIIDSLMEEGGASSKPELITQRVASMSCKAAVKGN 597 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +M E L+ E+ N C HGRPT I + ++EK F R Sbjct: 598 MRMSFAEAQNLVEELMNADNPYNCPHGRPTLISMSKYELEKKFKR 642 >gi|239826704|ref|YP_002949328.1| DNA mismatch repair protein [Geobacillus sp. WCH70] gi|259509936|sp|C5D9H6|MUTL_GEOSW RecName: Full=DNA mismatch repair protein mutL gi|239806997|gb|ACS24062.1| DNA mismatch repair protein MutL [Geobacillus sp. WCH70] Length = 619 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 183/620 (29%), Positives = 303/620 (48%), Gaps = 32/620 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N+IAAGE++ERP+ +KEL+EN++DA S+ +E + G + ++ DNG Sbjct: 3 KIRKLDDQLSNKIAAGEVVERPASVVKELVENAVDANSTIIEIELEEAGLTKIRVIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A +RH TSKI D D I T GFRGEALPSI +VS + + + G Sbjct: 63 GMEEDDCLVAFERHATSKIKDEHDLFRIRTLGFRGEALPSIASVSEVEMKTSTGDGP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G K+ GT + V +LFF PARL ++K+ E +TDV+ R+A+A+ Sbjct: 122 KVVLKGGKLVVHERTTSRKGTDITVSNLFFNTPARLKYMKTIHTELGHVTDVVNRLAMAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF ++ + S NG+ ++ + G D + + +S + T+QGY + Sbjct: 182 PDISFRLRHHGK---QLLYTSGNGDVRHVLAAIYGMDVAKKMIPIQAESLDFTVQGYISL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ + I Y +P+GRYP+V L + +DP VDVNV Sbjct: 239 PEVTRASRNYISTIVNGRYVRNIPLAKAIEAGYHTLLPIGRYPIVFLSIAMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--------------- 344 HPAK +RF + + Q+I++A+ + + ++ +K Sbjct: 299 HPAKLEVRFSKEAELNELVTQAIRQALQARTLIPEMMIKQKETPKPKAEQTAWTFEHVVK 358 Query: 345 -------FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD---DPTYSEDND 394 H D + PK ++ + +E++ + + D + ++ Sbjct: 359 EPFVSPLVHVDEPKQVDEPKQSSPVQEPKEEIPSFLPTVESKQNDVDDELVEMDEQTESS 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 +E Q+H YI++Q GL I+DQHAA ER+ +E R+ Sbjct: 419 DEQEHVNDRLPPLYPIGQMHGTYILAQNERGLYIIDQHAAQERIKYEYFREKVGEVINEV 478 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL P E LI H E+L + G+ E FG N +R P+ K +++ Sbjct: 479 QELLVPLTFHYPTDEYVLIDAHREELAKCGVFLEPFGHNTFIVRSHPSWFPKGEEAEIIE 538 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 ++I ++ID ++ E M+C SI++ ++ E+ LL + K + C Sbjct: 539 EMIQQVIDMKKVD-MKQLREKAAILMSCKRSIKANEYLRDDEIFALLESLRKTTDPFTCP 597 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRP I ++EK+F R Sbjct: 598 HGRPIIIHFSTYELEKMFKR 617 >gi|226224005|ref|YP_002758112.1| DNA mismatch repair protein [Listeria monocytogenes Clip81459] gi|259511145|sp|C1L2W0|MUTL_LISMC RecName: Full=DNA mismatch repair protein mutL gi|225876467|emb|CAS05176.1| DNA mismatch repair protein [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 603 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 195/602 (32%), Positives = 305/602 (50%), Gaps = 15/602 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL + + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLEMETST-GEAKGTT 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G +V + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGVSIAKKSVPVKAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +R + I Q I++ +K + +SKK + + K Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKETFHKLQLIPDGEISKKQKEDQKSEQIQISFEEKKPV 360 Query: 361 SLTNT-QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL-------GIACAQ 412 T T K + E S D DD ES+A + Q Sbjct: 361 KETPTLFSKPTIPEYVPSDEDAPREDDFILETMPSYEPESQAEQEEHTKERIPKMYPIGQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +H YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E Sbjct: 421 MHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPADEYVR 480 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ Sbjct: 481 LEEQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAP-SISIHKL 539 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 E+ M+C SI++ + + +M LL + + + C HGRP I+ ++EK+F Sbjct: 540 REDTAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMF 599 Query: 593 GR 594 R Sbjct: 600 KR 601 >gi|254852550|ref|ZP_05241898.1| DNA mismatch repair protein mutL [Listeria monocytogenes FSL R2-503] gi|300765758|ref|ZP_07075734.1| DNA mismatch repair protein MutL [Listeria monocytogenes FSL N1-017] gi|258605861|gb|EEW18469.1| DNA mismatch repair protein mutL [Listeria monocytogenes FSL R2-503] gi|300513533|gb|EFK40604.1| DNA mismatch repair protein MutL [Listeria monocytogenes FSL N1-017] Length = 603 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 194/602 (32%), Positives = 304/602 (50%), Gaps = 15/602 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL + + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLEMETST-GEAKGTT 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G +V + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGVSIAKKSVPVKAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +R + I Q I++ +K + +SKK + + Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKETFHKLQLIPDGEISKKQKEDQKSEQIQMSFEENKPV 360 Query: 361 SLTNT-QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL-------GIACAQ 412 T T K + E S D DD ES+A + Q Sbjct: 361 KETPTLFSKPTIPEYVPSDEDAPREDDFILETMPSYEPESQAEQEEHTKERIPKMYPIGQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +H YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E Sbjct: 421 MHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVTRELQELLVPIVLEFPADEYVR 480 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ Sbjct: 481 LEEQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAP-SISIHKL 539 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 E+ M+C SI++ + + +M LL + + + C HGRP I+ ++EK+F Sbjct: 540 REDTAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMF 599 Query: 593 GR 594 R Sbjct: 600 KR 601 >gi|254824536|ref|ZP_05229537.1| DNA mismatch repair protein mutL [Listeria monocytogenes FSL J1-194] gi|254932589|ref|ZP_05265948.1| DNA mismatch repair protein mutL [Listeria monocytogenes HPB2262] gi|293584148|gb|EFF96180.1| DNA mismatch repair protein mutL [Listeria monocytogenes HPB2262] gi|293593775|gb|EFG01536.1| DNA mismatch repair protein mutL [Listeria monocytogenes FSL J1-194] gi|328466113|gb|EGF37280.1| DNA mismatch repair protein [Listeria monocytogenes 1816] gi|332311845|gb|EGJ24940.1| DNA mismatch repair protein mutL [Listeria monocytogenes str. Scott A] Length = 603 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 194/602 (32%), Positives = 304/602 (50%), Gaps = 15/602 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL + + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLEMETST-GEAKGTT 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G +V + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGVSIAKKSVPVKAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +R + I Q I++ +K + +SKK + + Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKETFHKLQLIPDGEISKKQKEDQKSEQIQMSFEENKPV 360 Query: 361 SLTNT-QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL-------GIACAQ 412 T T K + E S D DD ES+A + Q Sbjct: 361 KETPTLFSKPTIPEYVPSDEDAPREDDFILETMPSYEPESQAEQEEHTKERIPKMYPIGQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +H YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E Sbjct: 421 MHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPADEYVR 480 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ Sbjct: 481 LEEQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAP-SISIHKL 539 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 E+ M+C SI++ + + +M LL + + + C HGRP I+ ++EK+F Sbjct: 540 REDTAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMF 599 Query: 593 GR 594 R Sbjct: 600 KR 601 >gi|218782320|ref|YP_002433638.1| DNA mismatch repair protein MutL [Desulfatibacillum alkenivorans AK-01] gi|218763704|gb|ACL06170.1| DNA mismatch repair protein MutL [Desulfatibacillum alkenivorans AK-01] Length = 643 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 192/643 (29%), Positives = 322/643 (50%), Gaps = 53/643 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +R L E + N+IAAGE++ERPS +KEL+ENSLDA+S+R+ + GG+S Q+ DNG Sbjct: 3 PVRILPEILTNKIAAGEVVERPSSVLKELVENSLDAKSTRIVVEVKKGGRSLIQVADNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ + ++R+ TSKI DD +I T GFRGEALPSIG+VS LTL++R N G Sbjct: 63 GMDKDDALLCLERYATSKIYTDDDLFSISTLGFRGEALPSIGSVSRLTLITRKKDNPAGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G KI +V + PGT++ V DLF+ +PAR FLK+ E I D + MA+ + Sbjct: 123 KVVMQGGKIVNVSEIGAPPGTMITVADLFYNVPARRKFLKTVATEMGHIADTMSAMALGW 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+ +F K+ + +RI+ V+G+D + ++K E++++G + Sbjct: 183 PETAFELIHNDR---KLFSWPAAQDPQDRIADVLGKDVAPGLIRFSQKEPEVSIEGCLAM 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F+R Y+F+NGR V DK + + Y + G+YPV V+ L + P QVDVNV Sbjct: 240 PEFSRTTKRGLYIFVNGRLVTDKLVTHALMEGYKGRLMKGKYPVAVVFLRVPPDQVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ +RF N ++ + +++++++ + K + + ++ + + + Sbjct: 300 HPAKAEVRFVNGAMVHQALSSTVKESLDALDQTPWKSAPKPPVRTEANEDLLRQPPSQES 359 Query: 360 TS------------------------------------------------LTNTQEKLFL 371 S +E Sbjct: 360 FSSFVKEEPSWIKAAAATPPQAPMYRPEPRFDAPREPRRPSSPSSHSAALSPQPREDSAF 419 Query: 372 QENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 D Y + A Q Y+I +++ GL+IVDQ Sbjct: 420 SRPEPPVPDPGTVQPEPYKAPQSQAAAAPQDGVSDLKALGQFANAYVICRSSKGLLIVDQ 479 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 HAAHER++FE+ ++ I Q LL PE +L E ++ DL + GI +RF Sbjct: 480 HAAHERILFEQFKKHMEVGGIEIQNLLIPETFELSHIEAEILERILPDLQKTGIDVDRFS 539 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRK 551 ++ PA+L+ +I ++++++++++ ++ D ++ L MAC+GS+R+ + Sbjct: 540 GRTFVVKAAPAMLANSDIGKIVKEMVEKVAEAGGNAHFFDALDECLIVMACHGSVRAHQS 599 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + EM+ LL+++E SQC HGRPT++ D+E+ F R Sbjct: 600 LSIQEMDALLKQLEACERPSQCPHGRPTWLLWTEYDLERAFKR 642 >gi|56963951|ref|YP_175682.1| DNA mismatch repair protein [Bacillus clausii KSM-K16] gi|81822107|sp|Q5WFY4|MUTL_BACSK RecName: Full=DNA mismatch repair protein mutL gi|56910194|dbj|BAD64721.1| DNA mismatch repair protein MutL [Bacillus clausii KSM-K16] Length = 654 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 186/655 (28%), Positives = 306/655 (46%), Gaps = 69/655 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L + + N+IAAGE++ERP+ +KEL+EN++DA SS++ I GG S +I DNG G Sbjct: 4 IQQLDDALSNKIAAGEVVERPASIVKELVENAIDANSSQILVEIEEGGLSSIRIVDNGTG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ +A RH TSKI D I T GFRGEALPSI +VS + + + G Q Sbjct: 64 IEPNELELAFSRHATSKIKTDRDLFTICTLGFRGEALPSIASVSRVNMQTSTGSA--GMQ 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G KI +P GT + V DLF+ PARL +LK+ E +++V+ RMA+AYP Sbjct: 122 VELEGGKIVHKQPSEARKGTTIVVTDLFYNTPARLKYLKTVLTEAGHVSEVMNRMALAYP 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F + + K + NG+ + I+QV G V + S + L+GY P Sbjct: 182 HIRFHYVSDGKTVLK---TAGNGDLRQVIAQVYGRKTAEKMVPITGSSLDYELRGYIAKP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N +FINGR +++ + I+ + +P+GR+P+ VL LE+DP +DVNVH Sbjct: 239 ELTRANRQYMSIFINGRYIRNFKLAKAIQQGFHTKLPIGRFPIAVLKLEMDPTLIDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS------------------------- 335 PAK +R + I +SI+KA++++ + Sbjct: 299 PAKLEVRLSKEEALSEMIAESIKKALSEETLIPEPKKENTAKTKSEQLSFSLAYELQPEK 358 Query: 336 -VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 + + M + K +TS+ N+ QE + + P +E + Sbjct: 359 EHVRETMQQPRQLAADDQVDRKKESTSIGNSWSPSHQQEEEVEQGRGSNASIPPRNERVE 418 Query: 395 PVEESEATH-----------------------------------YQLGIACAQIHQNYII 419 E + Q+H YI+ Sbjct: 419 TNTEEKYEQADRRTDESLPMEMEEEAAVVEPQLPLGNDAEAKGAMPPLYPVGQMHGTYIV 478 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 +Q G+ ++DQHAA ER+ +E Q +Q LL P ++L E ++ E E Sbjct: 479 AQNEQGMYLIDQHAAQERIKYEHFHQKLAEPLGQTQELLVPITLELTTRETLVVTESKEK 538 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L +G+ E FG N +R P + + +R+++++++D+ ++ + E Sbjct: 539 LEAVGVFLEEFGKNTFVVRSHPTWFPQGDEESTIREMVEQLLDNKRI-SIGELREEAAIM 597 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C +I++ R +++ EM +LL + + C HGRP I ++EK+F R Sbjct: 598 MSCKAAIKANRHLRTDEMFQLLETLRRCQEPYTCPHGRPVVIHFSTYELEKMFKR 652 >gi|315282284|ref|ZP_07870726.1| DNA mismatch repair protein MutL [Listeria marthii FSL S4-120] gi|313614067|gb|EFR87769.1| DNA mismatch repair protein MutL [Listeria marthii FSL S4-120] Length = 603 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 192/603 (31%), Positives = 306/603 (50%), Gaps = 17/603 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL+L + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLSLETST-GETKGTT 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G ++ + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGVSIAKKSIPVKAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM---------ISSFHQDNAP 351 PAK +R + I Q I+ A +K + +SKK SF ++ P Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKAAFHKLQLIPDGEISKKQKEVQKSEQIQMSFEENKPP 360 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 K ++ + R L + N+ E+ + Sbjct: 361 KEIPTLFSKPTIPEYVPSDVDAPREDDFILETMPSYESAPQNEHTEQPKER-IPKMYPIG 419 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 Q+H YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E Sbjct: 420 QMHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPADEYV 479 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 + E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ Sbjct: 480 RLEEQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAP-SISIHK 538 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 E+ M+C SI++ + + +M LL + + + C HGRP I+ ++EK+ Sbjct: 539 LREDTAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKM 598 Query: 592 FGR 594 F R Sbjct: 599 FKR 601 >gi|289550909|ref|YP_003471813.1| DNA mismatch repair protein MutL [Staphylococcus lugdunensis HKU09-01] gi|289180441|gb|ADC87686.1| DNA mismatch repair protein MutL [Staphylococcus lugdunensis HKU09-01] Length = 637 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 171/638 (26%), Positives = 310/638 (48%), Gaps = 50/638 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA+++ + + G S ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDADATEINVEVEESGISSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ + RH TSK+ DD +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEADDLNLVFHRHATSKLHDDDDLFHIRTLGFRGEALASISSVAKVTLTTCT-DNEQGH 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I +I +P GT V+V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYAENGQIVYKKPAKARKGTDVKVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + F+ + + N +G E ++ + G + V + +++ ++GY Sbjct: 182 PDIRFSLVSDGKIMLQTN---GSGKTNEVMADIYGMKVAKDLVHITGDTSDYHIEGYVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GRYP+ + +++DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFILNKAIVEGYHTLMMIGRYPICYINIKMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM-----ISSFHQDNAPKTH 354 HP K +R + I++ I++A + + + + +K + +F Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVEKIREAFHDRILIPQNKWDEKPKKNKVLHTFEQQQMDFEK 358 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSD-----DPTYSEDNDP-------------- 395 + S + E+ + + +T+D + D TY++ N Sbjct: 359 QRQNTNSNDTSSERASNELEQTTTSDDFNEETVQPVDSTYNKRNSNDDYFERQKEFLSEL 418 Query: 396 -------------------VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + ++ + Q+H YII+Q +G+ ++DQHAA E Sbjct: 419 ENSTSSNSSLLEQEDIKGTISKTPSRRVPYMEIVGQVHGTYIIAQNENGMFMIDQHAAQE 478 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R Q LL P + E +I ++ +L ++G+ E FG + Sbjct: 479 RIKYEYFRDKIGEVTNEVQDLLIPMTFHFSKDEQIIINQYQSELDKVGVHLEHFGGSDYI 538 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 + P L K ++ +++D+I+ +++ ++ E+ M+C SI++ ++ E Sbjct: 539 VNSYPVWLPKADVEDIIKDMIELVLEHKKID-IKKLREDAAIMMSCKKSIKANHYLKINE 597 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M L+ ++ K + C HGRP I ++EKLF R Sbjct: 598 MADLIDQLRKAEDPFTCPHGRPIIINFSNYELEKLFKR 635 >gi|289434686|ref|YP_003464558.1| DNA mismatch repair protein MutL [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170930|emb|CBH27472.1| DNA mismatch repair protein MutL [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 603 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 196/606 (32%), Positives = 313/606 (51%), Gaps = 17/606 (2%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 M I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I D Sbjct: 1 MTKNIVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIID 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG G+ E++ A RH TSKI + D +HT GFRGEALPSI +VSHLTL + + Sbjct: 61 NGSGIEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLTLETST-GES 119 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A Sbjct: 120 KGTTISLEGGKIIEQKSGHARKGTQIEVTQLFFNTPARLKYLKSLPTELGNITDILNRLA 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 +A+P +SF FS + S NG+ + I+ + G ++ + +S + + GY Sbjct: 180 LAHPNISFRFSHNGKP---LLQTSGNGDLRQVIAAIYGVSIAKKSIPVKAESLDFKISGY 236 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 +P NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VD Sbjct: 237 AILPEINRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVD 296 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM---ISSFHQDNAPKT 353 VNVHPAK +R + I Q I++A ++ + +SKK S + + Sbjct: 297 VNVHPAKLEVRLSKEKELGQLISQMIKQAFHELQLIPDGEISKKQKEIQKSEQIQMSFEE 356 Query: 354 HLPKYATS---LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH--YQLGI 408 + PK T + + +N +S + + + +E+ E T Sbjct: 357 NKPKEETPTLFSKPSIPEYVPSDNDVSIENDFVFETAPVYTSEEHIEQKETTQERIPKMY 416 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 Q+H YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ Sbjct: 417 PIGQMHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPTD 476 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 E + E L +G+ E FG N+ IR P K ++LR+IIDE + +S + + Sbjct: 477 EYVRLEEQKVKLEEVGVFLENFGQNSYIIRAHPTWFPKDEEEEMLREIIDEAL-TSPSIS 535 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 + E+ M+C SI++ + +M LL + + + C HGRP I+ ++ Sbjct: 536 IHKLREDTAIMMSCKKSIKANHYLTMKDMETLLDTLREASDPFTCPHGRPVIIQYSTYEL 595 Query: 589 EKLFGR 594 EK+F R Sbjct: 596 EKMFKR 601 >gi|148263827|ref|YP_001230533.1| DNA mismatch repair protein [Geobacter uraniireducens Rf4] gi|189030400|sp|A5GEV5|MUTL_GEOUR RecName: Full=DNA mismatch repair protein mutL gi|146397327|gb|ABQ25960.1| DNA mismatch repair protein MutL [Geobacter uraniireducens Rf4] Length = 602 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 196/603 (32%), Positives = 307/603 (50%), Gaps = 14/603 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E + N+IAAGE++ERP+ +KEL+EN+LDA S V I GG+ ++TD+G Sbjct: 4 RIKILPENLTNKIAAGEVVERPASVVKELVENALDAGCSEVVVEIEAGGRRLIKVTDSGC 63 Query: 62 GMTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ +A++RH TSKI+ D + T GFRGEALPSI +VS L +R G Sbjct: 64 GMTREDALLALERHATSKIASDSDLFGLATLGFRGEALPSIASVSRFALATREKGAIEGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I G ++ V+ M GT++ VR+LFF PARL F+KS E + D++ ++AI+ Sbjct: 124 EIYAEGGRVKEVKVCGMAEGTVISVRNLFFNTPARLKFMKSSDTEAGHVGDLLTKLAISR 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F ++ ++ + + + ER++ ++G + L+ + + G Sbjct: 184 PDVRFIYNNDGRTIFR----ALDADLRERVATLLGRALSADLYPLDFHDGPLGVTGLIAK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R A+ Y +INGR ++DK + + AY + GRYPVVVL + + +VDVNV Sbjct: 240 PECSRSAASHLYTYINGRFIKDKVVQHAVLQAYRNFMERGRYPVVVLFITVPADEVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RFR + + I +++ + + S A T + + Sbjct: 300 HPTKHEVRFREQGRVHDAIQAALESVLRATPWVRKQAAPQPFASPPPASEASATRVAEVR 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE--------SEATHYQLGIACA 411 +L + LQ++ E +Y Sbjct: 360 ETLARYSPEKHLQQSFTVPPAATFQRQQGAVSLPVAAREDDTASDKTESKGYYCSLSVIG 419 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 Q + YI+ Q LVI+DQHAAHER+ FEK++ F + ++ SQ LL PE I+L E A Sbjct: 420 QFNAAYILCQDGTDLVIIDQHAAHERVAFEKLKAQFAAAQVESQRLLFPETIELSFKEGA 479 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 + EH +L RLG E FG + +P +LS + + LRDI++E+ + T D Sbjct: 480 TLREHLAELGRLGFSLEEFGGATWLLNAVPRLLSGTDYLRTLRDILEELQTLGRSRTFAD 539 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 +E IL+ +AC+ +R + E++ L +M+ SS C HGRP L L +IE++ Sbjct: 540 ALEEILSRIACHSVVRGIHPLNGQEISALFAQMDATEFSSNCPHGRPVLRSLTLPEIERM 599 Query: 592 FGR 594 F R Sbjct: 600 FKR 602 >gi|239816439|ref|YP_002945349.1| DNA mismatch repair protein MutL [Variovorax paradoxus S110] gi|239803016|gb|ACS20083.1| DNA mismatch repair protein MutL [Variovorax paradoxus S110] Length = 622 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 196/612 (32%), Positives = 317/612 (51%), Gaps = 25/612 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR+L +++I+QIAAGE++ERP+ ++EL++N+LDA + +V +A GG + D+G Sbjct: 15 PIRELPDELISQIAAGEVVERPASVVRELLDNALDAGARQVTVRLASGGVRLISVEDDGQ 74 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+ +A++RH TSKI+ D + T GFRGEAL +I A++ L+++SR + Sbjct: 75 GIPREELTVALRRHATSKIASLNDLETVGTMGFRGEALAAINAIAELSILSRFAGADGAF 134 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ RPVA GT VEVR+LFF PAR FLK++ E + +RR A+A Sbjct: 135 ALDGRTGEL---RPVARAVGTTVEVRELFFATPARRKFLKTDATELAHCIEAVRRHALAR 191 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V F+ + +R++ + +DF+ +V + + + G GI Sbjct: 192 PEVGFSVWHDGKLMEQWRAA---DRREQRLADALSDDFVAQSVAVEYMGGAVRVAGRAGI 248 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R A+Q + ++NGR V+DK + +R+AY + + R PV L LEIDP +VDVNV Sbjct: 249 PDAARSRADQQFFYVNGRFVRDKVLSHAVRSAYEDVLHGQRQPVYALYLEIDPSRVDVNV 308 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKG------ISTSSVLSKKMISSFHQDNAPKT 353 HP K +RFR+ + + +I+ A+ + K + + A Sbjct: 309 HPTKIEVRFRDGREVHQAVRHAIENALAAPRAGDAVTPAAPQPFFKPNVPASGATWAQPG 368 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP-----------TYSEDNDPVEESEAT 402 A E L+ Q S L P+ + Sbjct: 369 INFVAAERGAGDFEALWPQRTAESGPSLWPAAGAAPAAFRAPAGLPAESPGADTPATSEH 428 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + LG A AQ+ YI+++ + GL++VD HAAHER+++E+++ + ITSQ LL P Sbjct: 429 AWPLGRALAQLQGIYILAENSQGLIVVDMHAAHERIVYERLKTQLDGAAITSQPLLIPAT 488 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 E A L LG++ F P +A+R +P L+ + +L R ++ E+ Sbjct: 489 FAATPQEVATAEACAAVLPTLGLEITPFSPRTLAVRAVPGTLADGDPVELARSVLAELAQ 548 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 + +Q +L+TMAC+G++R+ R++ EMN LLR+ME S QCNHGRPT+ + Sbjct: 549 HDASTVVQRAQNELLSTMACHGAVRANRRLTIDEMNALLRQMEATERSDQCNHGRPTWRQ 608 Query: 583 LKLSDIEKLFGR 594 L + +++ LF R Sbjct: 609 LSIRELDALFMR 620 >gi|238651126|ref|YP_002916984.1| DNA mismatch repair protein [Rickettsia peacockii str. Rustic] gi|259511150|sp|C4K2Y5|MUTL_RICPU RecName: Full=DNA mismatch repair protein mutL gi|238625224|gb|ACR47930.1| DNA mismatch repair protein [Rickettsia peacockii str. Rustic] Length = 610 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 244/610 (40%), Positives = 372/610 (60%), Gaps = 16/610 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE IN+IAAGE+IERP+ +KEL+EN++DA S++++ ++ GK+ I+D+G Sbjct: 1 MTIKFLSESTINRIAAGEVIERPASVVKELVENAVDASSTKIDIILERAGKNLIIISDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK + DF NI+TFGFRGEALPSI A+S + + S+ + Sbjct: 61 IGMTDKELEIAVERHTTSKFDESDFLNINTFGFRGEALPSIAAISKMLITSKKRDADKAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G V N GT +E+RDLFF PARL FL++++ E V++++A+A+ Sbjct: 121 QIKLIGGNEKQVTISVHNEGTKIEIRDLFFATPARLKFLRADKTELAATVGVVKKIALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 PK+S + + N K+ Q+ + N +RI VIG+DFI NA ++ K+ + ++ GYT Sbjct: 181 PKISLSLTHDGKNLLKLKGQNKDAETNLKQRIIDVIGDDFIKNAAYIDFKTPDFSICGYT 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 PT+NR ++ ++FIN R V+DK + +R AY + + RYP+ + L+I+P+ VDV Sbjct: 241 SSPTYNRASSEDQFLFINNRPVKDKLLQVALRVAYQDYLARDRYPICAIFLQINPQLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD----NAPKT 353 NVHPAK+ +RF +P +RN +I++I+ A+ K TS+ ++ + F +P + Sbjct: 301 NVHPAKAEVRFHDPNYVRNLLIEAIKNALTNKSHVTSTTIASDALELFKNPLVNKQSPVS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN-------DLLPSDDPTYSEDNDPVEESEATHYQL 406 + + + + N + N D L +N E + Sbjct: 361 KVINVNSKSADYRPTTHSTLNTVPQNHVCQKLIDTLSHAKIEQEVENHIEHEQQTRKQYK 420 Query: 407 -GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 G A AQ+H YIISQT D +VI DQHAAHERL +EK++ + ++ Q LL PEI++L Sbjct: 421 LGAAKAQLHTTYIISQTEDSIVITDQHAAHERLGYEKIKDYLKTEELIKQRLLIPEIVEL 480 Query: 466 L-EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 E + + +H E L++LG+ E+FG +I + EIP IL N+ +L++D+ D + D Sbjct: 481 PNEKKADCLYDHREKLYKLGLTLEKFGEKSIIVTEIPNILGDVNVQKLIQDLADHLSDFG 540 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 L + IE++ T AC+ SIR+GRK+ + EMN LLR+ME P S QCNHGRPT+I+LK Sbjct: 541 KNIALTELIEHVTETYACHYSIRAGRKLSADEMNALLRQMENTPLSGQCNHGRPTYIELK 600 Query: 585 LSDIEKLFGR 594 L DIE+LFGR Sbjct: 601 LKDIERLFGR 610 >gi|219848834|ref|YP_002463267.1| DNA mismatch repair protein MutL [Chloroflexus aggregans DSM 9485] gi|219543093|gb|ACL24831.1| DNA mismatch repair protein MutL [Chloroflexus aggregans DSM 9485] Length = 612 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 175/615 (28%), Positives = 303/615 (49%), Gaps = 26/615 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L E I QIAAGE++ERP+ KEL+EN+LDA + R+ + GGG ++ D+G Sbjct: 1 MPIRLLDETIAAQIAAGEVVERPASVAKELVENALDAGARRIVVEVRGGGLREIRVQDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+++EE+ +A RH TSK+ DD I T GFRGEALPSI +V+ + ++R G Sbjct: 61 CGISAEEVELAFARHATSKLHSADDLWAIRTLGFRGEALPSIASVAQVICVTRVADAELG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ I+G ++ S P GT + VR+LF+ P R +L+SE ET I+ ++++ A+A Sbjct: 121 VELRIAGGEVQSRLPCGCPAGTTITVRNLFYNTPVRREYLRSEATETGAISAIVQQYALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN----EITLQ 234 YP+VSF+ ++ + +G+ + ++ G + + + + + Sbjct: 181 YPEVSFSLVIDGRLAFQ---TTGDGDLRAVVVELYGLAVGRALLPVQAEVGDGELWVAVN 237 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDK-FILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G P R + + F N R +Q + + + + AY + GR+P+ ++ L + P Sbjct: 238 GLISPPDLTRSSRSYLSFFANRRALQPRGALAAVVENAYHTMLMKGRFPIAIIDLRVHPA 297 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------ 341 +DVNVHP KS ++FR P + + + Q+I+ A+ K Sbjct: 298 AIDVNVHPTKSEVKFRYPAHVHSVLGQAIRDALIKGSDIPVWEAPDPATAQRRFELRRLG 357 Query: 342 --ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 +S + + + E L + + T D + Sbjct: 358 QEQASSPATWGVGAQAWDRERAHWDVGTPVSRSEPSLLVSPVAVPTSNTAVPTPDASFAT 417 Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 ++ Q+ YI+++ +G+ ++DQHAAHER+ +EK+ + + SQ LL Sbjct: 418 SSSALPPLRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKLMNQYAQRAVESQQLLI 477 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P+ ++L L++ + E L G E +G + +R IPA L + Q L ++ + Sbjct: 478 PQAVELSPEASTLLVGNAEKLAEWGFALEPWGTG-VLVRAIPATLPPDELTQALHEVAER 536 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 + + L+ E +L T+AC+ S+R+G+ + EM LLR++E+ + C HGRPT Sbjct: 537 LAGRGGSSPLE-WREAMLITLACHTSVRAGQPLSHDEMRHLLRQLEQCVSPRTCPHGRPT 595 Query: 580 FIKLKLSDIEKLFGR 594 I + + +E+ FGR Sbjct: 596 MILMTPAQLERQFGR 610 >gi|308272776|emb|CBX29380.1| DNA mismatch repair protein mutL [uncultured Desulfobacterium sp.] Length = 613 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 198/606 (32%), Positives = 335/606 (55%), Gaps = 15/606 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKIR LSE I N+IAAGEI+ERP+ +KEL+EN+LDA+S+R+ I GGKS +++DNG Sbjct: 9 MKIRILSENISNKIAAGEIVERPASVVKELVENALDAKSTRILVEIEKGGKSLIRVSDNG 68 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM ++ ++++R+ TSKI +D +I+TFGFRGEALPSI +VS +L+++ ++ TG Sbjct: 69 TGMVKDDALLSIERYATSKIETDEDLFSINTFGFRGEALPSIASVSRFSLVTKGNESQTG 128 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I I G KI SV GT++ V+D+FF PAR FLKS E I DVI MA+ Sbjct: 129 IEIKIEGGKILSVTDKGSPEGTMISVKDIFFNTPARRKFLKSVDTEMGHIADVISTMALV 188 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + F + Y + + R +++G+D ++ L I++ G+ Sbjct: 189 NSNIQFNLTHNGRTVYNLLSSP---DSAVRTEEILGKDTKSSLYRLGFSKETISVSGWIS 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P R + Y+++NGR V DK + + AY + G +PV V+L+ + +VDVN Sbjct: 246 SPVVKRHTSRGIYIYVNGRFVHDKIVQHALLEAYTSRLIKGEFPVAVVLINLPFNEVDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI--NKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VHPAK +RF PT + + ++++ + + +++ +K+ + D + Sbjct: 306 VHPAKHEVRFSEPTRVHEAVKAAVKETLDLSDPFKKSAADYVQKVQHNKSVDISEHQVAY 365 Query: 357 KYATSLTNTQEKLFLQ------ENRLSTNDLLPSDDPTYSEDNDPVEES--EATHYQLGI 408 K A Q ++ ++ L + + T + + ++E+ E ++ I Sbjct: 366 KPAVKANPVQSEIVTDLPLKKVQSDLPLKKVQSYTEKTNPKQDSHIQENLWEKKQFKDLI 425 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 Q+H YII ++ +G+ ++DQHAAHER+++E+++ ++ + Q LL PE+I+ Sbjct: 426 VLGQLHGTYIICESVEGIFLIDQHAAHERILYEQIKAREDAYRYAIQNLLVPEVIEFGYR 485 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 E + + D R G E FG NA A++ +PA LS K++ ++ + I+ +I++ Sbjct: 486 EAGVFEKLLPDFQRAGFDVEPFGGNAFAVKSVPAFLSGKDVKSIITETIENLIETGFVPG 545 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 + + +L +AC+G+IR+ +K+ EM LL +++ S C HGRPT+IK + ++ Sbjct: 546 FEKASDELLKLIACHGAIRANQKLSDKEMITLLSQLDDCKMPSNCPHGRPTWIKFSIKEL 605 Query: 589 EKLFGR 594 EK F R Sbjct: 606 EKFFKR 611 >gi|328675701|gb|AEB28376.1| DNA mismatch repair protein MutL [Francisella cf. novicida 3523] Length = 600 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 201/596 (33%), Positives = 319/596 (53%), Gaps = 10/596 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E + NQIAAGE+IERPS +KELIENS+DA ++++ I GGKS +I DNG Sbjct: 10 QIKILPESLANQIAAGEVIERPSSVVKELIENSIDAGATQITIEIQEGGKSLIRIRDNGK 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ H TSK+ D+ + + GFRGEAL SI +V+ L ++S+ Sbjct: 70 GIAQQDLKLALAAHATSKVYTLDELEAVASMGFRGEALASIASVAKLKIISKYQDAKDAW 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ P A GT +EV +LF+ PAR FLK + E I D++++ + Y Sbjct: 130 QINNYTREV---VPAAHVTGTTIEVSELFYNTPARRKFLKKDNTEFLHIYDLLKKYMLCY 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++F + R+ + +FI NA+ ++++ ++ L G+ Sbjct: 187 FGIAFKLIHNGKEVKDLLLAEDVQLKYNRVLDLYSREFIENAIYVDKQVDDAHLWGWVAS 246 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P FNR + +INGR ++DK + I+ AY + + RYP +L L ID +VDVNV Sbjct: 247 PRFNRARPDMQSFYINGRIIKDKIVSHAIKNAYKDVMYGNRYPAFLLYLNIDYHEVDVNV 306 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAKS +RFRN I +F+ ++ KAI S + ++S + + L Sbjct: 307 HPAKSEVRFRNQKFIYDFLFGTVNKAITTNADIKISS--DQQVTSQERQTSNNNPLNIGN 364 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 SL E E+ S N + + N ++ LG A QIH YI+ Sbjct: 365 MSLDINIED--EAESDTSVNLFNKYFEKQTIQQNQINISEQSKSSGLGQAICQIHGIYIL 422 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL-TPEIIDLLEGECALIMEHDE 478 SQ DG+V+VD HAAHER+++E+M++ +++ + L P L A I E+ E Sbjct: 423 SQVEDGVVLVDMHAAHERILYEEMKKTWHADTDKFKQNLLVPLTCQLSSNIVATIEENLE 482 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +LG + +AI +R P + K+I L+ ++ E+ SS T +++ + +ILA Sbjct: 483 VFEKLGFEISIVADDAILVRATPIYVKNKDIQDLISNVATELSSSSKTKSVEFYLNHILA 542 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T++C+ ++R+ K+ EMN LLR+ME NS QCNHGRPT++KL + ++ F R Sbjct: 543 TVSCHAAVRANDKLSISEMNHLLRQMETVENSGQCNHGRPTWVKLNFAQLDSFFLR 598 >gi|170732087|ref|YP_001764034.1| DNA mismatch repair protein [Burkholderia cenocepacia MC0-3] gi|169815329|gb|ACA89912.1| DNA mismatch repair protein MutL [Burkholderia cenocepacia MC0-3] Length = 667 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 193/650 (29%), Positives = 324/650 (49%), Gaps = 65/650 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA ++ + V+ GG ITD+G G Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGATTLRIVLEEGGVKRISITDDGCG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A+ RH TSKI ++ + T GFRGEAL SI +V+ +++ SR + Sbjct: 83 IPPDELALALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMSITSRTADAAHAMK 142 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A + GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 143 I---DAQTGVLSPAAGSIGTTIEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRAALARP 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N +R+++++G+ F + L+E++ + + G G+P Sbjct: 200 DVAISVLHNGKAVEHWNATEP----AQRVAKILGDSFATAHLPLDEQAGPLAVYGCAGLP 255 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 256 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 315 Query: 301 PAKSYIRFRNP----TIIRNFIIQSIQKA---------------INKKGISTSSVLSKKM 341 P+K +RFR+ + + + +++ + + +S L + Sbjct: 316 PSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAHLEPAPRGPASFLDTPL 375 Query: 342 ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT------------- 388 + S +++ ++++ R++ L + Sbjct: 376 GQGTSHTTGGTGGSSFSSPSSSSSAGNTWMRQARMTQGTLPVAQPLALYDALFGRKDSGA 435 Query: 389 ------------------------YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 P+ LG A QIH Y+++Q Sbjct: 436 GTPEGTTLIARDAADSTDAPVAPLPGFAAAPLAAGAHDEQPLGFALGQIHGIYVLAQNAY 495 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GLVIVD HAAHER+++E+ + + Q+LL P + E + E + L LG Sbjct: 496 GLVIVDMHAAHERILYEQFKNALADRTVAVQSLLLPISMTATPVEIGTVEEERDTLESLG 555 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 P +AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ Sbjct: 556 FDLAVLSPTTLAIRAVPALLKDADLQSLARAVLADLHAFGGSRVLTERQHELLGTLACHH 615 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++R+ R++ EMN LLR+ME + QCNHGRPT+ +L L+D+++LF R Sbjct: 616 AVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLNDLDRLFMR 665 >gi|107021841|ref|YP_620168.1| DNA mismatch repair protein [Burkholderia cenocepacia AU 1054] gi|116688788|ref|YP_834411.1| DNA mismatch repair protein [Burkholderia cenocepacia HI2424] gi|105892030|gb|ABF75195.1| DNA mismatch repair protein MutL [Burkholderia cenocepacia AU 1054] gi|116646877|gb|ABK07518.1| DNA mismatch repair protein MutL [Burkholderia cenocepacia HI2424] Length = 667 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 193/650 (29%), Positives = 325/650 (50%), Gaps = 65/650 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA ++ + V+ GG ITD+G G Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGATTLRIVLEEGGVKRISITDDGCG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A+ RH TSKI ++ + T GFRGEAL SI +V+ +++ SR + Sbjct: 83 IPPDELALALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMSITSRTADAAHAMK 142 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A + GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 143 I---DAQTGVLSPAAGSIGTTIEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRAALARP 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N +R+++++G+ F + L+E++ + + G G+P Sbjct: 200 DVAISVLHNGKAVEHWNATEP----AQRVAKILGDSFATAHLPLDEQAGPLAVYGCAGLP 255 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 256 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 315 Query: 301 PAKSYIRFRNP----TIIRNFIIQSIQKA---------------INKKGISTSSVLSKKM 341 P+K +RFR+ + + + +++ + + +S L + Sbjct: 316 PSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAHLEPAPRGPASFLDTPL 375 Query: 342 ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED--------- 392 + S +++ ++++ R++ L + + Sbjct: 376 GQGTSHTTGGTGGSGFSSPSSSSSAGNTWMRQARMTQGTLPVAQPLALYDALFGRKDSGA 435 Query: 393 ----------------------------NDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 P+ LG A QIH Y+++Q Sbjct: 436 GTPDGTTLIARDAADSTDAPAAPLQGFAASPLAAGAHDEQPLGFALGQIHGIYVLAQNAY 495 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GLVIVD HAAHER+++E+ + + Q+LL P + E + E + L LG Sbjct: 496 GLVIVDMHAAHERILYEQFKSALADRTVAVQSLLLPISMTATPVEIGTVEEERDTLESLG 555 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 P +AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ Sbjct: 556 FDLAVLSPTTLAIRAVPALLKDADLQSLARAVLADLHAFGGSRVLTERQHELLGTLACHH 615 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++R+ R++ EMN LLR+ME + QCNHGRPT+ +L L+D+++LF R Sbjct: 616 AVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLNDLDRLFMR 665 >gi|124267220|ref|YP_001021224.1| DNA mismatch repair protein MutL [Methylibium petroleiphilum PM1] gi|124259995|gb|ABM94989.1| DNA mismatch repair protein MutL [Methylibium petroleiphilum PM1] Length = 604 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 201/599 (33%), Positives = 327/599 (54%), Gaps = 15/599 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L +++++QIAAGE++ERP+ ++EL++N+LDA + + + GG + D+G Sbjct: 13 QIRELPDELVSQIAAGEVVERPASVVRELVDNALDAGAREIVVKLMAGGVRAILVEDDGA 72 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + E+P+A++RH TSKI+ D+ N+ T GFRGEAL +I AVS L++ SR Sbjct: 73 GIPASELPLALKRHATSKIASLDELENVSTMGFRGEALAAIAAVSELSIASRHADAPHAQ 132 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ++ P A GT VEVR+LFF+ PAR FLK++ E + +RR A+A Sbjct: 133 RLDARSGEL---VPAARGVGTSVEVRELFFSTPARRKFLKTDATELAHCLEAVRRHALAR 189 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + Q +RI +GEDF+ ++ E+ + + + G G+ Sbjct: 190 PDVGFAVWHEGK----LLAQWRRAPLEQRIRDALGEDFMAHSREVTAQPTGLRISGRIGL 245 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R A++ YV++NGR V+D+ I +RTAYA+ + GR P VL +EI P +VDVNV Sbjct: 246 PDAARARADEQYVYVNGRHVRDRLISHGLRTAYADVLHGGRQPSYVLFIEIAPSRVDVNV 305 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN-KKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 HP K +RFR+ + + + + A+ + T L + + A + L Sbjct: 306 HPTKIEVRFRDGREVHQAVRHAAEDALALPRADETRPALFEPTRPAVWSPLAEQAGLGLG 365 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLP---SDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 A + + + + S + LL + D P+ + LG A AQ+ Sbjct: 366 A--GVSERRPAWPAPSGESVDLLLHLDAAPDGGAPSPFLPLTLQSGDDWPLGRALAQLGG 423 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 YI+++ DGLVIVD HAAHER+++E+++ +I SQ LL P I E A Sbjct: 424 VYILAENRDGLVIVDMHAAHERVVYERLKAGLAGARIESQPLLIPAIFPATAAEVATAEA 483 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 E L RLG+ N +A+R PA L+ ++ L R ++ E+ ++ ++ Sbjct: 484 QVETLARLGLDLTVLSSNVLALRSHPAALAGGDMVALARSVLAELARYDASHAIERAQHE 543 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +L++MAC+G++R+ R++ EMN LLR+ME+ + QCNHGRPT+ +L L ++++ F R Sbjct: 544 LLSSMACHGAVRANRRLSVEEMNALLRDMERTERADQCNHGRPTWRQLTLKELDQRFLR 602 >gi|160871897|ref|ZP_02062029.1| DNA mismatch repair protein MutL [Rickettsiella grylli] gi|159120696|gb|EDP46034.1| DNA mismatch repair protein MutL [Rickettsiella grylli] Length = 615 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 209/610 (34%), Positives = 333/610 (54%), Gaps = 17/610 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++L + NQIAAGE+IERP+ +KELIENSLDA+S ++ I GG ++ D+G Sbjct: 4 RIQRLPHHLANQIAAGEVIERPASIVKELIENSLDADSQHIDIDILKGGIQRIRVRDDGR 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A+ RH TSK++ +D I T GFRGEAL SI A++ L L S + G Sbjct: 64 GIHKEDLILALDRHATSKMNTLNDLERIKTLGFRGEALASISAIARLRLSSSIETTHGGW 123 Query: 120 QIAISGE--KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 I +I+ P GT VE++DLFF PAR FLKSEQ E I +++ R+++ Sbjct: 124 MITSDYHHDRIADPVPCPHTQGTCVEIQDLFFNTPARRKFLKSEQTEFGHIENIVTRLSL 183 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++ FT K Y + +RI+ + FI NA+ ++ ++ ++ L G+ Sbjct: 184 SHFSTRFTLHHNKQRIYHLLPAPDEITKEKRIATLCHPSFIENAIYIDMQATDLHLWGWI 243 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +PTF+R + Y ++N R ++DK I I+ AY + + GR+P +L LEIDP VDV Sbjct: 244 SLPTFSRSQPDLHYFYVNQRIIKDKLINHAIKHAYQDVLYKGRHPGFILFLEIDPSAVDV 303 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS-----------FH 346 N HPAK +RFR ++ +F+ QS+ A+ + + S Sbjct: 304 NAHPAKYEVRFRESRLVYDFVKQSLLNALANTYPQSPPCSDPLPVQSTELSQKIVDRPMP 363 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL--LPSDDPTYSEDNDPVEESEATHY 404 ++ + HLP T + + + D L + E Sbjct: 364 PPHSQQNHLPLQVTKNDVPLATKTVHDASVMVQDAQKLFIAEEPTVSQVKKSNEKPIADP 423 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 LG A AQ+ YI+++ T GL+IVD HAAHER+++E+++Q+ S + +Q LL P + Sbjct: 424 PLGFALAQLRGIYILAENTQGLIIVDIHAAHERILYERLKQNLQSAGLKTQVLLLPITLT 483 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L E + + + L + G + E GP + IR+IP +LS NI QL+ D+++++ Sbjct: 484 LTREELQFVEQCKQLLTQFGFEIETLGPETVVIRQIPELLSDTNIEQLIHDVLNDLTQHD 543 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 + L +I +L+++AC+ +IR+ R M EMN+LLR+ME+ S+QCNHGRPT+ + Sbjct: 544 ESQQLSVKINELLSSIACHSAIRAHRTMTLPEMNQLLRDMEQTLRSNQCNHGRPTWKQWS 603 Query: 585 LSDIEKLFGR 594 +S+I++LF R Sbjct: 604 ISEIDRLFYR 613 >gi|91789069|ref|YP_550021.1| DNA mismatch repair protein MutL [Polaromonas sp. JS666] gi|91698294|gb|ABE45123.1| DNA mismatch repair protein MutL [Polaromonas sp. JS666] Length = 660 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 197/635 (31%), Positives = 327/635 (51%), Gaps = 42/635 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR+L +++I+QIAAGE++ERP+ ++EL++N+LDA +++V + GG + D+G Sbjct: 24 PIRELPDELISQIAAGEVVERPASVVRELVDNALDAGATQVTVRLLAGGVRLILVEDDGQ 83 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG- 118 G+ EE+P+A++RH TSKI+ D + T GFRGEAL +I +++ ++L+SR +G Sbjct: 84 GIPREELPVALRRHATSKIASLQDLEAVGTMGFRGEALAAINSIADMSLLSRTLDGASGN 143 Query: 119 ----AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRR 174 A + ++P A + GT VEVR+LF+ PAR FLK++ E + +RR Sbjct: 144 AGEAAHAWQLDGRTGELKPAARSRGTSVEVRELFYATPARRKFLKTDATELAHCIEAVRR 203 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTN--GNFPERISQVIGEDFINNAVELNEKS---- 228 A+ P V F + +R++ V+G DF+ +V + +S Sbjct: 204 HALVRPDVGFAIWHEGKLVEQWRACPGEPAAAHTQRLADVLGSDFVEQSVAVYYESAARR 263 Query: 229 ----NEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 + + G GIP R A+Q + ++NGR V+DK + R+AY + + R PV Sbjct: 264 TDGLPAVRVWGRAGIPDAARSRADQQFAYVNGRYVRDKVLTHAARSAYEDVLHGHRQPVY 323 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK-----------GIST 333 L +E+DP +VDVNVHP K +RFR+ + + + + A+ T Sbjct: 324 ALYVEMDPARVDVNVHPTKIEVRFRDSREVHQAVRHATENALATPRSAAAASPDGAAADT 383 Query: 334 SSVLSKKMISSFHQDNAPKTHLPK---------YATSLTNTQEKLFLQENRLSTNDLLPS 384 ++ L S+ + KT + S + +Q R + +D Sbjct: 384 AAPLISSEFSASNTGFTQKTWGQPTINFAANGGHRASDFEAMWPVPVQPGRPAASDGFSP 443 Query: 385 DD--PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 P + P + + LG A AQ+ Y++++ GLVIVD HAAHER+++E+ Sbjct: 444 SPSLPQGASSAGPADSLPPGDWPLGRAIAQLQGIYVLAENAQGLVIVDMHAAHERIVYER 503 Query: 443 MRQDFNSTK---ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 ++ +S++ I SQ LL P E A E L LG++ F P +A+R Sbjct: 504 LKSQMDSSEGAHIASQPLLIPATFAASPQEVATAEACIETLATLGLEITPFSPRTLAVRA 563 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 +P L++ + +L R ++ E+ + +Q +L+TMAC+G++R+ RK+ EMN Sbjct: 564 VPTSLAQGDAVELARSVLAELAQHDASTVIQRAQNELLSTMACHGAVRANRKLTIDEMNA 623 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LLR+ME S QCNHGRPT+ ++ + +++ LF R Sbjct: 624 LLRQMEATERSDQCNHGRPTWRQVSIRELDALFLR 658 >gi|262375385|ref|ZP_06068618.1| DNA mismatch repair ATPase [Acinetobacter lwoffii SH145] gi|262309639|gb|EEY90769.1| DNA mismatch repair ATPase [Acinetobacter lwoffii SH145] Length = 655 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 210/645 (32%), Positives = 340/645 (52%), Gaps = 52/645 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L + NQIAAGE+IERP+ +KEL+ENS+DA ++ + + GG + +I DNG Sbjct: 9 RIRALDPALANQIAAGEVIERPASVVKELLENSIDAGATELIIRVEQGGSTLIEIIDNGR 68 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+AV RH TSKI +D+ I + GFRGEAL SI AVS LT++S G Sbjct: 69 GIHHEDLPLAVMRHATSKIQSADELYAISSLGFRGEALASIAAVSRLTMISSQSDEGIGY 128 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ ++ VA + GT + V+DLFF +PAR FLK E I +++RRMA+ Sbjct: 129 QVEVNGTAFDHQEIQAVAASKGTHIRVQDLFFNVPARRKFLKKPGTEFGHIEEIVRRMAL 188 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + F +S + + + +R+ Q++G F NA ++ S + L G+ Sbjct: 189 THFDIRFVLEHNESIKLNLPVADSGALRFQRVQQLLGRQFTENAYWIDADSINMRLSGWL 248 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP VDV Sbjct: 249 GHPSDARAQADLQYVYVNGRIVKDKTISHALRMAYDGILHGHQHAAYLLFLEVDPENVDV 308 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K IRF N + F+ ++ + + +T+ + AP+ + Sbjct: 309 NVHPTKHEIRFLNQREVHEFVRHYAKETLAQFQTATADLAEAMKQDEQPGLTAPQPRYQE 368 Query: 358 YAT--SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT------------- 402 + ++Q ++ + LS N+ S V S+ Sbjct: 369 QFSLHQTAHSQPQVVRTTSALSENETSDVLTDFASSGPQTVHYSQDYRKSYSGSQQLNNA 428 Query: 403 --------------------------------HYQLGIACAQIHQNYIISQTTDGLVIVD 430 + LGIA AQ+H YI++Q T+GL+IVD Sbjct: 429 LQSYLAPLRESSETEIFSPEQSFQTHVNTKVDEHPLGIAIAQLHGIYILAQNTEGLIIVD 488 Query: 431 QHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 HAAHER++ ++M+ ++ + TSQ LL P+++++ + + E E L RLG++ ++ Sbjct: 489 MHAAHERIVLQQMKSAWDKPEFWTSQQLLIPKVVNISRMQAMRVEELKEQLARLGLEIDQ 548 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 +G I +R +PAIL K + L+ ++++++ +L + + ILA MAC+G++R+ Sbjct: 549 YGDEQIIVRGVPAILHKADFDALIPELLNDLDPGDQAQSLLQKRDQILAGMACHGAVRAH 608 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R + EMN LLR+ME+ +SQCNHGRPT+ L+ ++KLF R Sbjct: 609 RILSLSEMNALLRQMEQTEFASQCNHGRPTWRAFPLAQLDKLFAR 653 >gi|116872836|ref|YP_849617.1| DNA mismatch repair protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|123458462|sp|A0AIK6|MUTL_LISW6 RecName: Full=DNA mismatch repair protein mutL gi|116741714|emb|CAK20838.1| DNA mismatch repair protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 603 Score = 518 bits (1334), Expect = e-144, Method: Composition-based stats. Identities = 195/602 (32%), Positives = 309/602 (51%), Gaps = 15/602 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL++ + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLSMETST-GETKGTT 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ISLEGGKIMEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G ++ + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGVSIARKSIPVKAESLDFNISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP----KTHLP 356 PAK +R + I Q I++A ++ + +SKK + + LP Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKEAFHQLQLIPDGEVSKKQKEQQKSEQIQMSFEENKLP 360 Query: 357 KYAT---SLTNTQEKLFLQENRLSTNDLLPSDDPTY-SEDNDPVEESEATHYQLGIACAQ 412 K S N E + E+ +D + PTY S+ E Q Sbjct: 361 KETPTLFSKPNVPEYVPSDEDTSREDDFILETLPTYDSKIQPEQAEEPKERIPKMYPIGQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +H YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E Sbjct: 421 MHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPTDEYVR 480 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ Sbjct: 481 LEEQKTKLEEVGVFLENFGQNSFIIRAHPTWFPKNQEEEMLREIIDEALSAP-SISIHKL 539 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 E+ M+C SI++ + +M LL + + + C HGRP I+ ++EK+F Sbjct: 540 REDTAIMMSCKKSIKANHYLTMQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMF 599 Query: 593 GR 594 R Sbjct: 600 KR 601 >gi|167635859|ref|ZP_02394168.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0442] gi|170687873|ref|ZP_02879087.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0465] gi|254683523|ref|ZP_05147383.1| DNA mismatch repair protein [Bacillus anthracis str. CNEVA-9066] gi|254722044|ref|ZP_05183833.1| DNA mismatch repair protein [Bacillus anthracis str. A1055] gi|254739666|ref|ZP_05197360.1| DNA mismatch repair protein [Bacillus anthracis str. Kruger B] gi|167528816|gb|EDR91574.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0442] gi|170668189|gb|EDT18938.1| DNA mismatch repair protein MutL [Bacillus anthracis str. A0465] Length = 627 Score = 518 bits (1334), Expect = e-144, Method: Composition-based stats. Identities = 185/628 (29%), Positives = 301/628 (47%), Gaps = 40/628 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---VLSKKMISSFHQDNAPKTHLP 356 HPAK +RF + I +++Q A K + + K+ S + + P Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 357 KYATSLT---NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ-------- 405 K + T +E + T +P++E ++ Sbjct: 359 KEPSMPEIVLPTGMDEKQEEPQAVKQPTQLWQPSTKPIIEEPIQEEKSWDSNEEGFELEE 418 Query: 406 -------------------LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 Q+H YI +Q GL ++DQHAA ER+ +E R Sbjct: 419 LEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGLYMIDQHAAQERINYEYFRDK 478 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 Q LL P IDL E + E E+L ++G+ E+FG + +R P K Sbjct: 479 VGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLFLEQFGHQSFIVRSHPTWFPK 538 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 +++ +++++++ ++ E M+C SI++ + + + ++ LL E+ Sbjct: 539 GQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASIKANQYLTNDQIFALLEELRT 597 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N C HGRP + ++EK+F R Sbjct: 598 TTNPYTCPHGRPILVHHSTYELEKMFKR 625 >gi|170744658|ref|YP_001773313.1| DNA mismatch repair protein MutL [Methylobacterium sp. 4-46] gi|168198932|gb|ACA20879.1| DNA mismatch repair protein MutL [Methylobacterium sp. 4-46] Length = 641 Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 237/630 (37%), Positives = 374/630 (59%), Gaps = 40/630 (6%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R+L ++++IAAGE++ERP+ A+KEL+EN++DA ++ +E I GG+ ++ D+G GM Sbjct: 12 RRLDPVLVDRIAAGEVVERPAAAVKELVENAIDAGATSIEVTIQAGGRRLIRVVDDGIGM 71 Query: 64 TSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 ++E++ +AV+RH TSK+ D D I T GFRGEALPSIGAV+ L+L+SR + +G + Sbjct: 72 SAEDLALAVERHATSKLPDGDLDRIDTLGFRGEALPSIGAVARLSLVSRTAEAASGHGLV 131 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + VRPVA GT VEV DLF PARL FLKS++ E + +++RR+A+A+P++ Sbjct: 132 VDAGIRGPVRPVAAERGTRVEVTDLFAATPARLKFLKSDRAEAGAVAEILRRLAVAHPQI 191 Query: 183 SFTFSTI-KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 FT + + ++ G++ R++ V+G DF N+ L+ + L G+ G+PT Sbjct: 192 RFTLRGESGGGGFVLPAETGPGSWLRRLAAVLGPDFAENSAPLSLEREGFALDGHVGLPT 251 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 F+R A + +NGR V+D+ +L +R AYA+ + R+PV+ L L DP QVDVNVHP Sbjct: 252 FHRAAATHMHFVVNGRPVRDRLLLGAVRGAYADVMASDRHPVLALALTCDPTQVDVNVHP 311 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP---------- 351 AK+ +RFR P ++R I+ +I +A+ ++G +++ ++ + + S P Sbjct: 312 AKTEVRFREPGLVRGLIVNAIHEALRREGGRSAASVAARTLESLRPAQTPLPMQAPLAAR 371 Query: 352 -------KTHLPKYATSLTNTQEKLFLQENRLSTND--------------------LLPS 384 ++ P+ + Q+ F Q+ + D + Sbjct: 372 SASPDARRSDPPRGGRAEPFAQDGPFAQDGPGPSPDGREPFGAQAGPPPGFAEAAQASFA 431 Query: 385 DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 + E + LG A AQ+H+ YI++QT DG+VIVDQHAAHERL++E+++ Sbjct: 432 AEALPPAAEARPPAPETPAHPLGAARAQLHETYIVAQTRDGIVIVDQHAAHERLVYERLK 491 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 ++ + I Q LL PE+++L E + E EDL LG+ E FG A+ +RE+PA L Sbjct: 492 REREAGGIARQLLLIPEVVELDPAEADRLAEAAEDLAALGLVLEGFGHGAVLVREVPAAL 551 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 + + LL D++D + + L R++ +L+ M+C+GSIR+GR+++ EMN LLREM Sbjct: 552 AGGGVRALLTDVVDVLQE-GGADPLARRLDAVLSRMSCHGSIRAGRRLRPEEMNALLREM 610 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 E P S QCNHGRPT+++LKL DIE+LFGR Sbjct: 611 EATPLSGQCNHGRPTYVELKLHDIERLFGR 640 >gi|229544350|ref|ZP_04433409.1| DNA mismatch repair protein MutL [Bacillus coagulans 36D1] gi|229325489|gb|EEN91165.1| DNA mismatch repair protein MutL [Bacillus coagulans 36D1] Length = 638 Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 182/639 (28%), Positives = 306/639 (47%), Gaps = 51/639 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + N+IAAGE++ERP+ +KEL EN++DAES+ +E + G ++ DNG Sbjct: 3 KIAQLDELLSNRIAAGEVVERPASVVKELAENAIDAESTVIEIDVWEAGMEKIRMIDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKI + D I + GFRGEALPSI AVS + +++ N G Sbjct: 63 GIEPDDVELAFSRHATSKIKNEHDLFRIRSLGFRGEALPSIAAVSRVEIVTST-GNGPGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G K + GT + V DLFF PARL ++KS E ITDV+ R+A+++ Sbjct: 122 KAVIEGGKWVAREQAPSRRGTEITVTDLFFNTPARLKYMKSIHTELGNITDVVNRLALSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + S NG+ + ++ + G + + + ++ + + G+ + Sbjct: 182 PEVSFRLRHGGKM---LLQTSGNGDVRQVLAAIYGVNIAKKMIPVQSQTLDFEINGFIAL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR +++ ++ I Y +P+GRYP+V++ L++DP VD NV Sbjct: 239 PEITRASRNYISTMVNGRFIKNYALVKAILEGYHTLLPIGRYPIVLMSLKMDPVLVDANV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS-----SFHQDNAP--- 351 HPAK +RF + I +I+ A K+ + S ++ + SF D+ P Sbjct: 299 HPAKLEVRFSKEKELCRAITGAIKAAFKKQELIPSGMVRQAEKPKQEQVSFQLDHLPGKT 358 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN------------------ 393 + PK ++ +E + +D P +P S + Sbjct: 359 EPETPKAFSAPVAPHPSPRPEETEMGQHDKSPDAEPHLSVEQPAADFPAFSGENLDSVFP 418 Query: 394 ------------------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 + A+ Q+H YI +Q +GL I+DQHAA Sbjct: 419 DEIHEPARDGFDVEEARGQDAAQQPASRIPPMYPIGQMHGTYIFAQNENGLYIIDQHAAQ 478 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 ER+ +E R+ K Q +L P ++ E I E+ + L +G+ E FG N+ Sbjct: 479 ERVKYEFFREKVGEVKKEVQEMLVPLTLEYATDEAIKIQENLDALKEVGVFLEPFGHNSF 538 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 +R P K +++ ++I+ ++ ++ E M+C GSI++ R +++ Sbjct: 539 IVRSHPTWFPKNEEKEVIEEMIEHVLSIKKVD-IKKLREKAAIMMSCRGSIKANRHLRND 597 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 E+ LL + + C HGRP I + ++EK+F R Sbjct: 598 EIQALLDALRMASDPFTCPHGRPIIIHYSVYELEKMFKR 636 >gi|304316822|ref|YP_003851967.1| DNA mismatch repair protein MutL [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778324|gb|ADL68883.1| DNA mismatch repair protein MutL [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 608 Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 184/610 (30%), Positives = 318/610 (52%), Gaps = 23/610 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L +++IN+I+AGE++ERP+ +KEL+ENS+DA S+ + I GG + +++D+G Sbjct: 3 KINLLDDELINKISAGEVVERPASIVKELVENSIDAGSNNITVEIMDGGIPYIKVSDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + +A RH TSKI D NI T GFRGEAL SI ++S + L ++ + G Sbjct: 63 GMDEIDAVLAFGRHATSKIKSINDLFNIETLGFRGEALASIASISKVLLKTKEENSLYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + G KI G +EVRD+F+ PAR FLK E ITD++ ++A++ Sbjct: 123 LINVEGGKIIKKVKCGCPKGCSIEVRDIFYNTPARRKFLKRPSTEAMYITDMVAKIALSR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF + K + S N + + I ++ G++ ++ V+ + + ++ + Sbjct: 183 PDISFKYIKDKKIELQ---TSGNNSVSDVILRLYGDELYSSLVQSEYTNEYLNVKVFLCK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P++ +GN N +F+NGR V++K I Y IP+ RYPVV+ + IDPR++DVNV Sbjct: 240 PSYTKGNRNMQILFVNGRFVKNKVYNVAIEEVYKTLIPINRYPVVITYINIDPRKIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK------------MISSFHQ 347 HP K ++F + I + I +I+ A+NK + KK + +Q Sbjct: 300 HPTKLEVKFSDEKEIFDSIYNTIKNALNKSNLIPVVKYEKKFTFSDVDKDYKHEQTQINQ 359 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 + ++ + +++ N + N +D + + + + + Sbjct: 360 FERTTKEITNHSGDVPFIKDETISSSNGSNKNIYFDNDKISETVQDKYISNFNSLPDNND 419 Query: 408 ---IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 + +II + D + ++DQHAAHER+++E+ +N+ + + P +++ Sbjct: 420 DKYKLIGVLFSTFIIVEKDDMVYLIDQHAAHERILYERFMSKYNN--VQGKQTTIPILVN 477 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + G+ +I E+ E ++LG K E FG N+I +RE+P IL + QL DIID++ + Sbjct: 478 IEPGDEEIINENIELFNKLGYKFESFGNNSIILREVPVILGQPESRQLFIDIIDKLRNGD 537 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ + ENI+ MAC ++++ K+ E+ L E++ N C HGRP I +K Sbjct: 538 FNKDIKLKEENII-MMACKKAVKAMDKLSKEEIKSLFDELKITENPYTCPHGRPVIISIK 596 Query: 585 LSDIEKLFGR 594 +IEK+F R Sbjct: 597 KYEIEKMFKR 606 >gi|47095355|ref|ZP_00232965.1| DNA mismatch repair protein MutL [Listeria monocytogenes str. 1/2a F6854] gi|254898430|ref|ZP_05258354.1| DNA mismatch repair protein [Listeria monocytogenes J0161] gi|254912079|ref|ZP_05262091.1| DNA mismatch repair protein mutL [Listeria monocytogenes J2818] gi|254936406|ref|ZP_05268103.1| DNA mismatch repair protein MutL [Listeria monocytogenes F6900] gi|47016176|gb|EAL07099.1| DNA mismatch repair protein MutL [Listeria monocytogenes str. 1/2a F6854] gi|258608998|gb|EEW21606.1| DNA mismatch repair protein MutL [Listeria monocytogenes F6900] gi|293590047|gb|EFF98381.1| DNA mismatch repair protein mutL [Listeria monocytogenes J2818] Length = 603 Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 194/602 (32%), Positives = 303/602 (50%), Gaps = 15/602 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL++ + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLSMETST-GETKGTT 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ITLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G ++ + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGVSIARKSIPVKAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +R + I Q I++A +K + +SKK + + Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKEAFHKLQLIPGGEISKKQKEVQKSEQIQMSFEENKPQ 360 Query: 361 SLTNT-QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH-------YQLGIACAQ 412 T T K + E S D DD E E H Q Sbjct: 361 KETPTLFSKPSIPEYVPSDLDAPREDDFILETMPSYEPEQEVEHAEQPKERIPKMYPIGQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +H YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E Sbjct: 421 MHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPADEYVR 480 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ Sbjct: 481 LEEQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAP-SISIHKL 539 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 E+ M+C SI++ + + +M LL + + + C HGRP I+ ++EK+F Sbjct: 540 REDTAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMF 599 Query: 593 GR 594 R Sbjct: 600 KR 601 >gi|46907632|ref|YP_014021.1| DNA mismatch repair protein [Listeria monocytogenes serotype 4b str. F2365] gi|67460881|sp|Q71ZR6|MUTL_LISMF RecName: Full=DNA mismatch repair protein mutL gi|46880900|gb|AAT04198.1| DNA mismatch repair protein MutL [Listeria monocytogenes serotype 4b str. F2365] Length = 603 Score = 518 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 194/602 (32%), Positives = 303/602 (50%), Gaps = 15/602 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL + + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLEMETST-GEAKGTT 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG + I+ + G +V + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGELRQVIAAIYGVSIAKKSVPVKAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +R + I Q I++ +K + +SKK + + Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKETFHKLQLIPDGEISKKQKEDQKSEQIQMSFEENKPV 360 Query: 361 SLTNT-QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL-------GIACAQ 412 T T K + E S D DD ES+A + Q Sbjct: 361 KETPTLFSKPTIPEYVPSDEDAPREDDFILETMPSYEPESQAEQEEHTKERIPKMYPIGQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +H YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E Sbjct: 421 MHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPADEYVR 480 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ Sbjct: 481 LEEQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAP-SISIHKL 539 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 E+ M+C SI++ + + +M LL + + + C HGRP I+ ++EK+F Sbjct: 540 REDTAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMF 599 Query: 593 GR 594 R Sbjct: 600 KR 601 >gi|254829837|ref|ZP_05234492.1| DNA mismatch repair protein [Listeria monocytogenes 10403S] Length = 601 Score = 517 bits (1332), Expect = e-144, Method: Composition-based stats. Identities = 194/600 (32%), Positives = 304/600 (50%), Gaps = 13/600 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL + + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLAMETST-GETKGTS 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G ++ + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGISIAKKSIPVKAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT-HLPKYA 359 PAK +R + I Q I++A +K + +SKK + + K A Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKEAFHKLQLIPDGEISKKQKEVQKSEQIQMSFEENKPA 360 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDD-----PTYSEDNDPVEESEATHYQLGIACAQIH 414 + K + E S D DD E EE Q+H Sbjct: 361 KEIPTLFSKPTIPEYVPSDEDAPREDDFILETMPPYEPQAEQEEHSKERIPKMYPIGQMH 420 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E + Sbjct: 421 ATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPADEYVRLE 480 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ E Sbjct: 481 EQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAP-SISIHKLRE 539 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + M+C SI++ + + +M LL + + + C HGRP I+ ++EK+F R Sbjct: 540 DAAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMFKR 599 >gi|290894465|ref|ZP_06557423.1| DNA mismatch repair protein MutL [Listeria monocytogenes FSL J2-071] gi|290555980|gb|EFD89536.1| DNA mismatch repair protein MutL [Listeria monocytogenes FSL J2-071] Length = 603 Score = 517 bits (1332), Expect = e-144, Method: Composition-based stats. Identities = 193/602 (32%), Positives = 303/602 (50%), Gaps = 15/602 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL++ + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLSMETST-GETKGTT 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 VTLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G ++ + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGVSIARKSIPVKAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +R + I Q I++A +K + +SKK + + Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKEAFHKLQLIPDGEISKKQKEVQKSEQIQMSFEENKPQ 360 Query: 361 SLTNT-QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH-------YQLGIACAQ 412 T T K + E S D DD E E H Q Sbjct: 361 KETPTLFSKPSIPEYVPSDLDAPREDDFILETMPSYEPEQEVEHAEQPKERIPKMYPIGQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +H YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E Sbjct: 421 MHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPADEYVR 480 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ Sbjct: 481 LEEQKVKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAP-SISIHKL 539 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 E+ M+C SI++ + + +M LL + + + C HGRP I+ ++EK+F Sbjct: 540 REDTAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMF 599 Query: 593 GR 594 R Sbjct: 600 KR 601 >gi|255319552|ref|ZP_05360766.1| DNA mismatch repair enzyme [Acinetobacter radioresistens SK82] gi|262378427|ref|ZP_06071584.1| DNA mismatch repair ATPase [Acinetobacter radioresistens SH164] gi|255303492|gb|EET82695.1| DNA mismatch repair enzyme [Acinetobacter radioresistens SK82] gi|262299712|gb|EEY87624.1| DNA mismatch repair ATPase [Acinetobacter radioresistens SH164] Length = 654 Score = 517 bits (1332), Expect = e-144, Method: Composition-based stats. Identities = 208/643 (32%), Positives = 334/643 (51%), Gaps = 50/643 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERP+ +KEL+ENS+DA ++ + +A GG + +I DNG Sbjct: 10 RIHTLDAALANQIAAGEVIERPASVVKELLENSIDAGATELIIRVAQGGSTLIEIIDNGR 69 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +AV RH TSKI ++D I + GFRGEAL SI AVS L+L S + G Sbjct: 70 GIHPEDLALAVMRHATSKIQSAEDLYAIASLGFRGEALASIAAVSRLSLCSSQDDSGIGY 129 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ ++ VA GT + V+DLFF +PAR FLK E I +++RRMA+ Sbjct: 130 QVEVNGTAFDHQEIQAVAAQKGTHIRVQDLFFNVPARRKFLKKPTTEFGHIEEIVRRMAL 189 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V F S R + + +R+ Q++G F NA ++ +S + L G+ Sbjct: 190 THFDVRFVLEHNDSIRLNLPIADSGELRSQRVQQLLGRSFTENAYWIDAQSINMHLSGWL 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP VDV Sbjct: 250 GHPSDARPQADLQYVYVNGRIVKDKTISHALRMAYDGILHGHQHAGYLLFLEVDPENVDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS--------------------SVL 337 NVHP K IRF N + F+ ++ +++ +T+ Sbjct: 310 NVHPTKHEIRFLNQREVHEFVRHYAKETLSQFQTATADLAQAMKAESVIHTTTGSYNPQP 369 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND--- 394 + H+ P+ A T +L + + + + Y+ Sbjct: 370 RHQEQFQLHRPTQPEASALGIAAPQTEISTELLTEFKASAPRTVQYAPQRPYAGSQQLNN 429 Query: 395 ----------------------PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 V + LGIA AQ+H YI++Q T+GL+IVD H Sbjct: 430 ALKSYLSPLREESTQAPVIPAASVVSDHVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMH 489 Query: 433 AAHERLIFEKMRQDFNSTKIT-SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 AAHER++ ++M+ ++ ++ +Q LL P+++ + + A I E L RLG+ +++G Sbjct: 490 AAHERILLQQMKSAWDQSEFWIAQQLLIPKVVSITRMQAARIEELKPQLERLGLDIDQYG 549 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRK 551 + +R +PAIL K + L+ ++++++ S L + + ILA MAC+G++R+ R+ Sbjct: 550 DEQVIVRGVPAILQKADFNTLIPELLNDLDPSDEARGLTQKRDQILAGMACHGAVRAHRQ 609 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + EMN LLR+ME+ +SQCNHGRPT+ L+ ++KLF R Sbjct: 610 LSLSEMNALLRQMEQTEFASQCNHGRPTWRAFPLTQLDKLFAR 652 >gi|217964449|ref|YP_002350127.1| DNA mismatch repair protein MutL [Listeria monocytogenes HCC23] gi|254766170|sp|B8DFS3|MUTL_LISMH RecName: Full=DNA mismatch repair protein mutL gi|217333719|gb|ACK39513.1| DNA mismatch repair protein MutL [Listeria monocytogenes HCC23] gi|307570986|emb|CAR84165.1| DNA mismatch repair protein [Listeria monocytogenes L99] Length = 603 Score = 517 bits (1331), Expect = e-144, Method: Composition-based stats. Identities = 194/602 (32%), Positives = 303/602 (50%), Gaps = 15/602 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL++ + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLSMETST-GETKGTT 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ITLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G ++ + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGVSIARKSIPVKAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +R + I Q I++A +K + +SKK + + Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKEAFHKLQLIPDGEISKKQKEVQKSEQIQMSFEENKPQ 360 Query: 361 SLTNT-QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH-------YQLGIACAQ 412 T T K + E S D DD E E H Q Sbjct: 361 KETPTLFSKSSIPEYVPSDLDAPREDDFILETMPSYEPEQEVEHAEQPKERIPKMYPIGQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +H YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E Sbjct: 421 MHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPADEYVR 480 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ Sbjct: 481 LEEQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAP-SISIHKL 539 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 E+ M+C SI++ + + +M LL + + + C HGRP I+ ++EK+F Sbjct: 540 REDTAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMF 599 Query: 593 GR 594 R Sbjct: 600 KR 601 >gi|217979001|ref|YP_002363148.1| DNA mismatch repair protein MutL [Methylocella silvestris BL2] gi|254766172|sp|B8ETE4|MUTL_METSB RecName: Full=DNA mismatch repair protein mutL gi|217504377|gb|ACK51786.1| DNA mismatch repair protein MutL [Methylocella silvestris BL2] Length = 605 Score = 517 bits (1331), Expect = e-144, Method: Composition-based stats. Identities = 233/604 (38%), Positives = 356/604 (58%), Gaps = 10/604 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +R+L +I++IAAGE+IERP+ A+KELIEN+LDA + R++ I GG+ ++ D+G Sbjct: 1 MPVRRLDPVLIDRIAAGEVIERPASALKELIENALDAGARRIDVAIEAGGRKLIRVVDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E++ +AV+RH TSK+ + D S+I T GFRGEALPSIG+V+ L + SR + GA Sbjct: 61 CGMAPEDLDLAVERHATSKLPEGDLSSIETLGFRGEALPSIGSVAALEIFSRAMGSAVGA 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + P A GT VE+RDLF PARL FL++++ E +++ R+A+A+ Sbjct: 121 RVKVDCGVKEGPAPAAQPQGTRVEIRDLFAGTPARLKFLRTDRAEARASAEIVERLAMAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQS-TNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P+V F F++ + + + + R S V+G+DF +NA+ + + + LQG+ G Sbjct: 181 PQVRFGFASSDVRGFDLAACADSPEGRLTRFSAVLGKDFRDNALFVEAEREGVRLQGFAG 240 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PT++R +A +VF+NGR V+D+ +L R AY + +P GR+ +VL L DPR+VDVN Sbjct: 241 LPTWHRASAAAQHVFVNGRPVRDRLLLGAARAAYMDFLPSGRHAALVLFLTCDPREVDVN 300 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI-------SSFHQDNAP 351 VHPAK+ +RFR+P + R I+ ++++ + S V + F P Sbjct: 301 VHPAKAEVRFRDPGLTRGLIVGALKQTLADAQHRASPVNGASALDVLARRGPGFSGAGGP 360 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-EATHYQLGIAC 410 + + + + + S E LG A Sbjct: 361 ANWDWRRSPANPGFDAAALAGFAEAPAAAFAAVESLAADTRANAAAPSLEDLEAPLGAAR 420 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 AQIH+ YI+SQT DG+VIVDQHAAHERL++E+++ +K Q LL P I++L E Sbjct: 421 AQIHETYIVSQTRDGIVIVDQHAAHERLVYERLKAARAGSKAPRQALLIPAIVELARAEV 480 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 I++ L G+ E FGP A+A+ E PA+L + +L RD+ +++ L+ Sbjct: 481 EAILDAAVLLAEFGLIIEPFGPGAVAVTETPALLQDPDPTRLARDLAAALVEDDGAAALE 540 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 R +LATMAC+ S+R+GR+M+ EMN LLR+ME+ P S QCNHGRPT+++LKL+D+EK Sbjct: 541 RRFNLVLATMACHNSVRAGRRMRPEEMNALLRDMERTPGSGQCNHGRPTYVELKLADVEK 600 Query: 591 LFGR 594 LFGR Sbjct: 601 LFGR 604 >gi|89256853|ref|YP_514215.1| DNA mismatch repair protein [Francisella tularensis subsp. holarctica LVS] gi|115315236|ref|YP_763959.1| DNA mismatch repair protein [Francisella tularensis subsp. holarctica OSU18] gi|134302436|ref|YP_001122406.1| DNA mismatch repair protein [Francisella tularensis subsp. tularensis WY96-3418] gi|156503027|ref|YP_001429092.1| DNA mismatch repair protein [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009252|ref|ZP_02274183.1| DNA mismatch repair protein [Francisella tularensis subsp. holarctica FSC200] gi|187932042|ref|YP_001892027.1| DNA mismatch repair enzyme with ATPase activity [Francisella tularensis subsp. mediasiatica FSC147] gi|254368131|ref|ZP_04984151.1| DNA mismatch repair protein mutL [Francisella tularensis subsp. holarctica 257] gi|254369732|ref|ZP_04985742.1| DNA mismatch repair protein MutL [Francisella tularensis subsp. holarctica FSC022] gi|290954345|ref|ZP_06558966.1| DNA mismatch repair protein [Francisella tularensis subsp. holarctica URFT1] gi|295312232|ref|ZP_06803031.1| DNA mismatch repair protein [Francisella tularensis subsp. holarctica URFT1] gi|89144684|emb|CAJ80015.1| DNA mismatch repair protein [Francisella tularensis subsp. holarctica LVS] gi|115130135|gb|ABI83322.1| DNA mismatch repair protein MutL [Francisella tularensis subsp. holarctica OSU18] gi|134050213|gb|ABO47284.1| DNA mismatch repair protein [Francisella tularensis subsp. tularensis WY96-3418] gi|134253941|gb|EBA53035.1| DNA mismatch repair protein mutL [Francisella tularensis subsp. holarctica 257] gi|156253630|gb|ABU62136.1| DNA mismatch repair protein MutL [Francisella tularensis subsp. holarctica FTNF002-00] gi|157122691|gb|EDO66820.1| DNA mismatch repair protein MutL [Francisella tularensis subsp. holarctica FSC022] gi|187712951|gb|ACD31248.1| DNA mismatch repair enzyme with ATPase activity [Francisella tularensis subsp. mediasiatica FSC147] Length = 600 Score = 517 bits (1331), Expect = e-144, Method: Composition-based stats. Identities = 201/596 (33%), Positives = 328/596 (55%), Gaps = 10/596 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E + NQIAAGE+IERPS +KELIEN++DA ++++ I GGKS +I DNG Sbjct: 10 QIKILPESLANQIAAGEVIERPSSVVKELIENAIDAGATQIIIEIQEGGKSLIRIRDNGK 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ H TSK+ D+ + + GFRGEAL SI +V+ L ++S+ + Sbjct: 70 GIAQQDLKLALAPHATSKVYTLDELEAVASMGFRGEALASIASVAKLKIISKHQNSQDAW 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ PVA GT +EV +LF+ PAR FLK + E I D++++ + Y Sbjct: 130 QINNQTREV---MPVAHVTGTTIEVSELFYNTPARRKFLKKDNTEFLHIYDLLKKYMLCY 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++F + R+ + +FI NA+ ++++ + L G+ Sbjct: 187 FGIAFKLIHNGKEVKDLLIAEEVQLKYNRVLDLYSREFIENAIYVDKQVGDAHLWGWVAS 246 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P FNR A+ +INGR ++DK + I+ AY + + RYP +L L+ID +VDVNV Sbjct: 247 PRFNRARADMQSFYINGRIIKDKIVSHAIKNAYKDVMYGNRYPAFLLYLDIDYCEVDVNV 306 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAKS +RFRN I +F+ +I KAI +++ + Q+ + P Sbjct: 307 HPAKSEVRFRNQKFIYDFLFGNINKAI----TTSADIKVSSHQQVISQERQTSNNNPLNI 362 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 +++ +E +T+ L + S++N+ ++ LG A QIH YI+ Sbjct: 363 GNMSLDISIDDEKEESSNTSLLDKYFNNQNSQENEIRISQQSKSNGLGQAICQIHGIYIL 422 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL-TPEIIDLLEGECALIMEHDE 478 SQ DG+V+VD HAAHER+++E+M++ +++ + L P L A + E+ E Sbjct: 423 SQVEDGVVLVDMHAAHERILYEEMKKTWHANADKFKQNLLMPLTCQLSSSIVAAVDENVE 482 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +LG + +AI +R P + K+I L+ +I E+I SS T +++ + +ILA Sbjct: 483 VFKKLGFEISVVADDAILVRSTPIYVKDKDIQTLITNIATELISSSKTKSVEFYLNHILA 542 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T++C+ ++R+ K+ EMN LLR+ME NS QCNHGRPT++KL + ++ F R Sbjct: 543 TVSCHAAVRANDKLSIPEMNHLLRQMETVENSGQCNHGRPTWVKLNFAQLDSFFLR 598 >gi|121604065|ref|YP_981394.1| DNA mismatch repair protein MutL [Polaromonas naphthalenivorans CJ2] gi|120593034|gb|ABM36473.1| DNA mismatch repair protein MutL [Polaromonas naphthalenivorans CJ2] Length = 644 Score = 517 bits (1331), Expect = e-144, Method: Composition-based stats. Identities = 193/635 (30%), Positives = 317/635 (49%), Gaps = 45/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ ++EL++N+LDA +++V ++ GG + D+G Sbjct: 11 PIRDLPDELISQIAAGEVVERPASVVRELLDNALDAGATQVTVRLSAGGVRLILVEDDGL 70 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+P+A++RH TSKI+ D + T GFRGEAL +I +++ ++L+SR Sbjct: 71 GIPREELPVALRRHATSKIASLQDLEAVGTMGFRGEALAAINSIADMSLLSRTLDTEHAW 130 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ +I GT VEVR+LF+ PAR FLK++ E D +RR A+ Sbjct: 131 QLDGRTGEIKPASRAR---GTSVEVRELFYATPARRKFLKTDATELAHCIDAVRRHALVR 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTN-------GNFPERISQVIGEDFINNAVELNEK----- 227 P V F + S + +R++ V+G +F+ ++ ++ + Sbjct: 188 PDVGFAIWHEGKLVEQWRACSGALAGEHSLPHHDQRLADVLGAEFVEQSIAVHYESSARR 247 Query: 228 ---SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 + + G GIP R A+Q + ++NGR V+DK + R+AY + + R PV Sbjct: 248 ADGRPAVRVWGRAGIPDAARTRADQQFAYVNGRYVRDKVLSHAARSAYEDVLHGQRQPVY 307 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 L +EIDP ++DVNVHP K +RFR+ + + + + A+ + S+ Sbjct: 308 ALYVEIDPARIDVNVHPTKIEVRFRDSREVHQAVRHATEDALAAPRAGAALADKPAAESA 367 Query: 345 FHQ----------------DNAPKTHLPKYATSLTNTQEKLFLQEN---RLSTNDLLPSD 385 P + S + E L+ R S Sbjct: 368 VQPVVGGMFESNKAFAQQGWAQPAINFRANQGSHASDFEALWPAPPGTGRPSAPSSPMPG 427 Query: 386 DPTYSEDNDPVEESEAT------HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 P +N T + LG A AQ+ YI+++ GL+IVD HAAHER++ Sbjct: 428 APPAPTENPQASAPPETSSLPQGDWPLGRALAQLQGVYILAENAQGLIIVDMHAAHERIV 487 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E+++ F++++I SQ LL P E A + L LG++ F P +A+R Sbjct: 488 YERLKSQFDASRIASQPLLIPATFAATAQEVATAEASTDTLALLGLEITPFSPKTLAVRA 547 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 +P L+ + +L R ++ E+ + +Q +L TMAC+G++R+ R++ EMN Sbjct: 548 VPTSLAAGDAVELARSVLAELAQHDASTVIQRAQNELLGTMACHGAVRANRRLTVDEMNA 607 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LLR+ME S QCNHGRPT+ +L L +++ LF R Sbjct: 608 LLRQMEATERSDQCNHGRPTWRQLSLKELDSLFLR 642 >gi|16803444|ref|NP_464929.1| DNA mismatch repair protein [Listeria monocytogenes EGD-e] gi|224501653|ref|ZP_03669960.1| DNA mismatch repair protein [Listeria monocytogenes FSL R2-561] gi|254827665|ref|ZP_05232352.1| DNA mismatch repair protein mutL [Listeria monocytogenes FSL N3-165] gi|20455092|sp|Q8Y788|MUTL_LISMO RecName: Full=DNA mismatch repair protein mutL gi|16410833|emb|CAC99482.1| DNA mismatch repair protein [Listeria monocytogenes EGD-e] gi|258600044|gb|EEW13369.1| DNA mismatch repair protein mutL [Listeria monocytogenes FSL N3-165] Length = 601 Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats. Identities = 194/600 (32%), Positives = 304/600 (50%), Gaps = 13/600 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL + + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLAMETST-GETKGTS 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G ++ + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGISIAKKSIPVKAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT-HLPKYA 359 PAK +R + I Q I++A +K + +SKK + + K A Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKEAFHKLQLIPEGEISKKQKEVQKSEQIQMSFEENKPA 360 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDD-----PTYSEDNDPVEESEATHYQLGIACAQIH 414 + K + E S D DD E EE Q+H Sbjct: 361 KEIPTLFSKPTIPEYVPSDEDAPREDDFILETMPPYEPQAEQEEHSKERIPKMYPIGQMH 420 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E + Sbjct: 421 ATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPADEYVRLE 480 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ E Sbjct: 481 EQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAP-SISIHKLRE 539 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + M+C SI++ + + +M LL + + + C HGRP I+ ++EK+F R Sbjct: 540 DTAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMFKR 599 >gi|238924111|ref|YP_002937627.1| DNA mismatch repair enzyme (putative ATPase) [Eubacterium rectale ATCC 33656] gi|259509932|sp|C4ZA52|MUTL_EUBR3 RecName: Full=DNA mismatch repair protein mutL gi|238875786|gb|ACR75493.1| DNA mismatch repair enzyme (predicted ATPase) [Eubacterium rectale ATCC 33656] Length = 648 Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats. Identities = 181/651 (27%), Positives = 303/651 (46%), Gaps = 62/651 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I L+++ I++IAAGE++ERP +KEL+EN++DA S+ + I GG SF +ITDN Sbjct: 1 MPNIAILNQETIDKIAAGEVVERPCSVVKELVENAIDAGSTAITVEIKEGGISFIRITDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +++ +A RH TSKI +D + + GFRGEAL SI AV+ + L+++ T Sbjct: 61 GCGIERDQVAVAFYRHSTSKIRSAEDLLTVKSLGFRGEALSSISAVARVELITKTYDELT 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G K S + GT V+DLF+ +PAR FLK+ Q E + I+D++ ++A+ Sbjct: 121 GTRYVIEGSKELSNEEIGAPDGTTFIVKDLFYNVPARRKFLKTAQTEGSYISDMVEKLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P +SF F + S NGN + I + G + ++ +E+ + ++G+ Sbjct: 181 SHPDISFKFINNNQTKLH---TSGNGNRKDIIYHIFGREISSSLLEVKHECEYFKVEGFI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P RGN N FINGR V+ + I AY + +YP VL +DV Sbjct: 238 GKPVITRGNRNYENYFINGRYVKSNILSRAIEEAYKSFLMQHQYPFTVLYFTFFSE-LDV 296 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS----SVLSKKMISSFHQDNAPKT 353 NVHP K +RF N I + +I + K + S + K I +++ P+ Sbjct: 297 NVHPTKMELRFDNNNEIYVELCDTIYAILAHKEMIPEVPVDSTPAPKKIVHEYKEPIPEP 356 Query: 354 HLPKYATSLTNTQEKLFLQEN-----------------------------RLSTNDLLPS 384 + + + + ++ + S + + Sbjct: 357 FEKRRINEVRAAESRSVYGQSVTATVKSSTVKGPAVNEPLTENTLNQQKVKTSASTPVVH 416 Query: 385 DDPTYSEDNDPVEESEATHYQLGIA---------------------CAQIHQNYIISQTT 423 + + E H G Q+ + Y + + Sbjct: 417 TGNSVEPKPETSTAYEPAHVVTGTQQTLGDYDKVFLTESAKKQFSIIGQLFKTYWLIEFE 476 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 D L I+DQHAAHE++++EK + TSQ + P ++ L EC ++ ++ + + Sbjct: 477 DKLYIIDQHAAHEKVLYEKTMARLANKDFTSQRISPPIVMTLDARECEMLEKYRPQIEQF 536 Query: 484 GIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY 543 G + E FG I IP L ++ L +++D+ + +T D I +A+M+C Sbjct: 537 GYEVEHFGGKEYMISAIPDNLFNIDMKDLFIEMLDDFSN-ATGRQTPDIITEKVASMSCK 595 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ K+ E+N+L+ E+ N C HGRPT I + +IEK F R Sbjct: 596 AAVKGNDKLTLPEINKLIDELLSLDNPYNCPHGRPTIISMSKYEIEKKFKR 646 >gi|313633306|gb|EFS00158.1| DNA mismatch repair protein MutL [Listeria seeligeri FSL N1-067] Length = 603 Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats. Identities = 197/606 (32%), Positives = 312/606 (51%), Gaps = 17/606 (2%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 M I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I D Sbjct: 1 MTKNIVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIID 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG G+ E++ A RH TSKI + D +HT GFRGEALPSI +VSHLTL + + Sbjct: 61 NGSGIEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLTLETST-GES 119 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A Sbjct: 120 KGTTISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLA 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 +A+P +SF FS + + NG+ + I+ + G ++ + +S + + GY Sbjct: 180 LAHPNISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGVSIAKKSIPVKAESLDFKISGY 236 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 +P NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VD Sbjct: 237 AILPEINRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVD 296 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHPAK +R + I Q I++A ++ + +SKK + Sbjct: 297 VNVHPAKLEVRLSKEKELGQLISQMIKQAFHELQLIPDGEISKKQKEIQKXXXIQMSFEE 356 Query: 357 KYATSLTNT-QEKLFLQENRLSTNDLLPSDDPTY-------SEDNDPVEESEATHYQLGI 408 T T K + E S ND+ +D + SE++ +E+ Sbjct: 357 NKPKEETPTLFSKPSIPEYVPSDNDVPIENDFVFETAPVYTSEEHIEQKETTQERIPKMY 416 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 Q+H YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ Sbjct: 417 PIGQMHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPTD 476 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 E + E L +G+ E FG N+ IR P K ++LR+IIDE + +S + + Sbjct: 477 EYVRLEEQKVKLEEVGVFLENFGQNSYIIRAHPTWFPKDEEEEMLREIIDEAL-TSPSIS 535 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 + E+ M+C SI++ + +M LL + + + C HGRP I+ ++ Sbjct: 536 IHKLREDTAIMMSCKKSIKANHYLTMKDMETLLDTLREASDPFTCPHGRPVIIQYSTYEL 595 Query: 589 EKLFGR 594 EK+F R Sbjct: 596 EKMFKR 601 >gi|56707628|ref|YP_169524.1| DNA mismatch repair protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110670099|ref|YP_666656.1| DNA mismatch repair protein [Francisella tularensis subsp. tularensis FSC198] gi|224456698|ref|ZP_03665171.1| DNA mismatch repair protein [Francisella tularensis subsp. tularensis MA00-2987] gi|254370144|ref|ZP_04986150.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874448|ref|ZP_05247158.1| mutL, DNA mismatch repair protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604120|emb|CAG45119.1| DNA mismatch repair protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320432|emb|CAL08502.1| DNA mismatch repair protein [Francisella tularensis subsp. tularensis FSC198] gi|151568388|gb|EDN34042.1| hypothetical protein FTBG_01248 [Francisella tularensis subsp. tularensis FSC033] gi|254840447|gb|EET18883.1| mutL, DNA mismatch repair protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282158785|gb|ADA78176.1| DNA mismatch repair protein [Francisella tularensis subsp. tularensis NE061598] Length = 600 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 201/596 (33%), Positives = 328/596 (55%), Gaps = 10/596 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E + NQIAAGE+IERPS +KELIEN++DA ++++ I GGKS +I DNG Sbjct: 10 QIKILPESLANQIAAGEVIERPSSVVKELIENAIDAGATQIIIEIQEGGKSLIRIRDNGK 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ H TSK+ D+ + + GFRGEAL SI +V+ L ++S+ + Sbjct: 70 GIAQQDLKLALAPHATSKVYTLDELEAVASMGFRGEALASIASVAKLKIISKHQNSQDAW 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ PVA GT +EV +LF+ PAR FLK + E I D++++ + Y Sbjct: 130 QINNQTREV---MPVAHVTGTTIEVSELFYNTPARRKFLKKDNTEFLHIYDLLKKYMLCY 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++F + R+ + +FI NA+ ++++ + L G+ Sbjct: 187 FGIAFKLIHNGKEVKDLLMAEEVQLKYNRVLDLYSREFIENAIYVDKQVGDAHLWGWVAS 246 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P FNR A+ +INGR ++DK + I+ AY + + RYP +L L+ID +VDVNV Sbjct: 247 PRFNRARADMQSFYINGRIIKDKIVSHAIKNAYKDVMYGNRYPAFLLYLDIDYCEVDVNV 306 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAKS +RFRN I +F+ +I KAI +++ + Q+ + P Sbjct: 307 HPAKSEVRFRNQKFIYDFLFGNINKAI----TTSADIKVSSHQQVISQERQTSNNNPLNI 362 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 +++ +E +T+ L + S++N+ ++ LG A QIH YI+ Sbjct: 363 GNMSLDISIDDEKEESSNTSLLDKYFNNQNSQENEIRISQQSKSNGLGQAICQIHGIYIL 422 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL-TPEIIDLLEGECALIMEHDE 478 SQ DG+V+VD HAAHER+++E+M++ +++ + L P L A + E+ E Sbjct: 423 SQVEDGVVLVDMHAAHERILYEEMKKTWHANADKFKQNLLMPLTCQLSSSIVAAVDENVE 482 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +LG + +AI +R P + K+I L+ +I E+I SS T +++ + +ILA Sbjct: 483 VFKKLGFEISVVADDAILVRSTPIYVKDKDIQTLITNIATELISSSKTKSVEFYLNHILA 542 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T++C+ ++R+ K+ EMN LLR+ME NS QCNHGRPT++KL + ++ F R Sbjct: 543 TVSCHAAVRANDKLSIPEMNHLLRQMETVENSGQCNHGRPTWVKLNFAQLDSFFLR 598 >gi|284801790|ref|YP_003413655.1| DNA mismatch repair protein [Listeria monocytogenes 08-5578] gi|284994932|ref|YP_003416700.1| DNA mismatch repair protein [Listeria monocytogenes 08-5923] gi|284057352|gb|ADB68293.1| DNA mismatch repair protein [Listeria monocytogenes 08-5578] gi|284060399|gb|ADB71338.1| DNA mismatch repair protein [Listeria monocytogenes 08-5923] Length = 603 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 192/602 (31%), Positives = 308/602 (51%), Gaps = 15/602 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL + + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLAMETST-GETKGTS 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G ++ + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGISIAKKSIPVKAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK--------MISSFHQDNAPK 352 PAK +R + I Q I++A +K + +SKK I ++N P Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKEAFHKLQLIPDGEISKKQKEVQKSEQIQMSFEENKPA 360 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 +P + T + ++ + +L + E EE Q Sbjct: 361 KEIPTLFSKPTIPEYVPSDEDAPRDDDFILETMPSYEPELQAEQEEHPKERIPKMYPIGQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +H YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E Sbjct: 421 MHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPADEYVR 480 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ Sbjct: 481 LEEQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAP-SISIHKL 539 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 E+ M+C SI++ + + +M LL + + + C HGRP I+ ++EK+F Sbjct: 540 REDTAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMF 599 Query: 593 GR 594 R Sbjct: 600 KR 601 >gi|121593398|ref|YP_985294.1| DNA mismatch repair protein MutL [Acidovorax sp. JS42] gi|120605478|gb|ABM41218.1| DNA mismatch repair protein MutL [Acidovorax sp. JS42] Length = 657 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 194/643 (30%), Positives = 328/643 (51%), Gaps = 54/643 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ A++EL++N+LDA ++++ + GG + D+G Sbjct: 17 PIRDLPDELISQIAAGEVVERPASAVRELVDNALDAGATQITVRLLAGGVRLIAVEDDGS 76 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A++RH TSKI++ D ++ T GFRGEAL +I +VS + L+SR Q + Sbjct: 77 GIPQDELPVALRRHATSKITNLHDLESVATMGFRGEALAAIASVSEMALLSRTAQQASAF 136 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ RP A + GT VEV++LFF+ PAR FLK++ E + +RR A+A Sbjct: 137 LLDARSGEL---RPAARSRGTTVEVKELFFSTPARRKFLKTDATELAHCIEAVRRHALAR 193 Query: 180 PKVSFTFSTIKSNRYKMNFQST----------NGNFPERISQVIGEDFINNAVELNEKSN 229 P V F + +R+S V+GEDFI ++V ++ + Sbjct: 194 PDVGFAIWHEGKLVEQWRATLAPAAAPDEGERQQALQQRLSDVLGEDFIRDSVPVHLRLG 253 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 +T+ G G+P R A+Q + ++NGR V+DK + R+AY + + + PV L ++ Sbjct: 254 AVTVTGRAGLPDAARSRADQQFCYVNGRFVRDKVLTHAARSAYEDVLHGHKQPVYALYVQ 313 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ------------------------KA 325 IDP++VDVNVHP K +RFR+ + + +++ + Sbjct: 314 IDPQRVDVNVHPTKIEVRFRDSREVHQAVRHAVENALAAPRAQALAAAAASTSVAPAAPS 373 Query: 326 INKKGISTSSVLSKKMISSFHQD-------------NAPKTHLPKYATSLTNTQEKLFLQ 372 + + + + ++ + T P T + Sbjct: 374 VGDSDRNPAHPPYWQAQAAIKFEERAGHKVSDLQALWGTSTAAPPPGMPATTAMAPVAPG 433 Query: 373 ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 + + + + + LG A AQ+H YI++++ GLV+VD H Sbjct: 434 APTAPSFSPASAAPLAAVDM-ATAHVEDGHTWPLGRAVAQVHGVYILAESAQGLVVVDMH 492 Query: 433 AAHERLIFEKMRQDFNST-KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 AAHER+++E+++ + +I SQ LL P E A H + L LG++ F Sbjct: 493 AAHERIVYERLKAQVDQGARIASQPLLIPATFAATPEEVATAEAHADTLALLGLEVVPFS 552 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRK 551 P +A+R +P L++ N +L R ++ E+ + +Q ILATMAC+G++R+ R+ Sbjct: 553 PRTLAVRAVPTTLAQGNPVELARSVLAELATHDASTVVQRAQSEILATMACHGAVRANRR 612 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + EMN LLR+ME S QCNHGRPT+ +L + +++ LF R Sbjct: 613 LTLDEMNALLRQMEVTDRSDQCNHGRPTWRQLSMKELDALFLR 655 >gi|222110107|ref|YP_002552371.1| DNA mismatch repair protein Mutl [Acidovorax ebreus TPSY] gi|221729551|gb|ACM32371.1| DNA mismatch repair protein MutL [Acidovorax ebreus TPSY] Length = 657 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 197/642 (30%), Positives = 329/642 (51%), Gaps = 52/642 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ A++EL++N+LDA ++++ + GG + D+G Sbjct: 17 PIRDLPDELISQIAAGEVVERPASAVRELVDNALDAGATQITVRLLAGGVRLIAVEDDGS 76 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A++ H TSKI++ D ++ T GFRGEAL +I +VS + L+SR Q + Sbjct: 77 GIPQDELPVALRSHATSKITNLHDLESVATMGFRGEALAAIASVSEMALLSRTAQQASAF 136 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ RP A + GT VEV++LFF+ PAR FLK++ E + +RR A+A Sbjct: 137 LLDARSGEL---RPAARSRGTTVEVKELFFSTPARRKFLKTDATELAHCIEAVRRHALAR 193 Query: 180 PKVSFTFSTIKSNRYKMNFQST----------NGNFPERISQVIGEDFINNAVELNEKSN 229 P V F + +R+S V+GEDFI ++V ++ + Sbjct: 194 PDVGFAIWHEGKLVEQWRATLAPAATADEGERQQALQQRLSDVLGEDFIRDSVPVHLRLG 253 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 +T+ G G+P R A+Q + ++NGR V+DK + R+AY + + + PV L ++ Sbjct: 254 AVTVTGRAGLPDAARSRADQQFCYVNGRFVRDKVLTHAARSAYEDVLHGHKQPVYALYIQ 313 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ------------------------KA 325 IDP++VDVNVHP K +RFR+ + + +++ + Sbjct: 314 IDPQRVDVNVHPTKIEVRFRDSREVHQAVRHAVENALAAPRAQALAAAAASTSVAPAAPS 373 Query: 326 INKKGISTSSVLSKKMISSFH------------QDNAPKTHLPKYATSLTNTQEKLFLQE 373 + + + + S+ Q + T Sbjct: 374 VGDSDRNPAHPPYWQAQSAIKFEERAGHKVSDLQALWGTSTAAPPPGMPATTAMAPVAPG 433 Query: 374 NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 + + S P + D + + LG A AQ+H YI++++ GLV+VD HA Sbjct: 434 APTAPSFSPASAAPLAAVDMATAHVEDGHTWPLGRALAQVHGVYILAESAQGLVVVDMHA 493 Query: 434 AHERLIFEKMRQDFNST-KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AHER+++E+++ + +I SQ LL P E A H + L RLG++ F P Sbjct: 494 AHERIVYERLKAQVDQGARIASQPLLIPATFAATPEEVATAEAHADTLARLGLEVVPFSP 553 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 +A+R +P L++ N +L R ++ E+ + +Q ILATMAC+G++R+ R++ Sbjct: 554 RTLAVRAVPTTLAQGNPVELARSVLAELATHDASTVVQRAQSEILATMACHGAVRANRRL 613 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME S QCNHGRPT+ +L + +++ LF R Sbjct: 614 TLDEMNALLRQMEVTDRSDQCNHGRPTWRQLSMKELDALFLR 655 >gi|295706199|ref|YP_003599274.1| DNA mismatch repair protein MutL [Bacillus megaterium DSM 319] gi|294803858|gb|ADF40924.1| DNA mismatch repair protein MutL [Bacillus megaterium DSM 319] Length = 625 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 181/626 (28%), Positives = 301/626 (48%), Gaps = 38/626 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS+++ N+IAAGE++ERP+ +KEL+EN++DA S+ +E + G S +I DNG Sbjct: 3 KIVQLSDELSNKIAAGEVVERPASVVKELVENAIDANSTVIEIELEEAGLSKIRILDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ SE+ A +RH TSKI D I T GFRGEALPSI +VS L L + G Sbjct: 63 GIASEDCLTAFKRHATSKIKTEQDLFRIRTLGFRGEALPSIASVSMLELKTST-GEEAGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G +I + GT + + +LFF PARL ++K+ E +TDV+ R+A+++ Sbjct: 122 HLKLRGGEIVHHELTSSRKGTELVIENLFFNTPARLKYMKTVNTELGNVTDVVNRLAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS ++ + + +G+ + ++ + G + +N +S + + GY + Sbjct: 182 PEVSIRLMHQGR---QLLYTNGSGDVRQVLAAIYGMAVAKKMIPINVQSLDYEVNGYVAL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR V++ +L ++ Y +P+GR+P+V L + +DP VDVNV Sbjct: 239 PEITRASRNYMSTIINGRFVKNYGLLKAVQQGYHTLLPIGRFPIVFLTITMDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ--------DNAP 351 HPAK +R + I Q ++ A K+ + +V+ K S+ D+ Sbjct: 299 HPAKLEVRLSKEAELFELIEQGVKAAFKKQQLIPDAVVPTKSKSAVQPTEQQTFTFDHQS 358 Query: 352 KTH-----------------------LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 KT P T + E+L + + ++ Sbjct: 359 KTSGYQPSNTVREPSFKEAPARVDEIRPPVKTEVIRQDEELQPTFREIEHYEESVEENAP 418 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 E N E+ Q+H YI++Q GL I+DQHAA ER+ +E ++ Sbjct: 419 IPEPNHSAEDQPEPRVPAMYPIGQMHGTYILAQNEKGLFIIDQHAAQERIKYEYFKRKLG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 Q LL P ++ E ++ E+ + L +G+ E FG N+ +R P K Sbjct: 479 EVDSEVQELLMPLTLEFSGNEALILEEYKDMLAEVGVFLEPFGQNSYIVRSHPQWFPKGE 538 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 + + ++I +I ++ E M+C GSI++ +++ E+ LL + K Sbjct: 539 EQETIEEMIQQIFTMKRV-NIEKLREEAAIMMSCKGSIKANHHLRNDEIFALLETLRKTT 597 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP I ++EK+F R Sbjct: 598 DPFTCPHGRPIIIHHSTYEMEKMFKR 623 >gi|291559007|emb|CBL37807.1| DNA mismatch repair protein MutL [butyrate-producing bacterium SSC/2] Length = 645 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 185/645 (28%), Positives = 303/645 (46%), Gaps = 56/645 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L +K I+ IAAGE+IERP+ +KEL+EN++DA+++ V I GG + ++TDNG Sbjct: 3 KIQLLDQKTIDNIAAGEVIERPASVVKELVENAVDAKANAVTVEIKDGGMTLIRVTDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A RH TSKI +D ++ + GFRGEAL SI AV+ + L+++ ++ +G Sbjct: 63 GIPKDQVKTAFLRHATSKIRSVEDLLSVSSLGFRGEALSSISAVAQVELVTKTAESFSGV 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I G + + + GT V++LF+ PAR FLKS E + ++ +A+++ Sbjct: 123 SYKIYGGEEEAFDDIGAPDGTTFLVKNLFYNTPARRKFLKSATTEAGYVEQMMVHIALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF F N+ + S NG + I + G D + L ++ ++ + G+ Sbjct: 183 PEISFKFIHNNKNK---IYTSGNGKVKDIIYHIYGRDVAGALIPLEAQNEDVKVTGFVAK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +RGN N FINGR ++ I I Y RYP V L +ID +DVNV Sbjct: 240 PYVSRGNRNYESYFINGRYIKSSIIYKAIEEGYRTFTMKHRYPFVCLDFKIDQELLDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS------------------------- 334 HP K IRFRN I ++ +++ A+ +K + Sbjct: 300 HPTKMEIRFRNGREIYELVVDAVRAALLQKDLVQDVLRETPKKKELPKTKEVKKPEPFEV 359 Query: 335 ---------------------SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE 373 + + + + P P + S NT++ + Sbjct: 360 NRRKEEVQKVDQQGQGVQQQVEKQRQAVQQQIEKPSHPVKKTPTASESSKNTKKPTYAGL 419 Query: 374 NRLSTNDLLPSDDPTYSEDNDPVEESEA----THYQLGIACAQIHQNYIISQTTDGLVIV 429 N + P N + Q+ + Y + + D L I+ Sbjct: 420 NYNTQKKDFPQYKTDELSSNQMTLREDPVFSVQARPDRKILGQLFKTYWLIEYEDQLFIM 479 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQHAAHE++ +E++ ++F +I SQ L P ++ + E + + + LG E Sbjct: 480 DQHAAHEKVNYERLMKNFKEKEIYSQRLEPPMVVTVSMTEAEALTRYKDAFAGLGFTIES 539 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 FG N IRE+PA L L +++D + + T + I + +ATMAC SI+ Sbjct: 540 FGGNEYCIREVPANLYGIGERDLFMELLDAVSQENGTLD-TEVIASKIATMACKMSIKGN 598 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ +E+ LL E+ K N QC HGRPT IK+ +I+K F R Sbjct: 599 QRVSLMEVEHLLDELMKLENPYQCPHGRPTIIKMSKYEIDKKFKR 643 >gi|330826560|ref|YP_004389863.1| DNA mismatch repair protein mutL [Alicycliphilus denitrificans K601] gi|329311932|gb|AEB86347.1| DNA mismatch repair protein mutL [Alicycliphilus denitrificans K601] Length = 654 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 204/633 (32%), Positives = 336/633 (53%), Gaps = 47/633 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ A++EL++N+LDA +++V + GG + D+G Sbjct: 27 PIRDLPDELISQIAAGEVVERPASAVRELVDNALDAGATQVTVRLLAGGVRLIAVEDDGM 86 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A++RH TSKI + D ++ T GFRGEAL +I +VS + L+SR Q + Sbjct: 87 GIPRDELPIALRRHATSKIGNLHDLESVATMGFRGEALAAIASVSEMALLSRTAQQASAF 146 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ RP A + GT VEV++LFF+ PAR FLK++ E + +RR A+A Sbjct: 147 MLDARSGEL---RPAARSQGTTVEVKELFFSTPARRKFLKTDATELAHCVEAVRRHALAR 203 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN------FPERISQVIGEDFINNAVELNEKSNEITL 233 P V F + +G R++ V+GEDFI +V ++ +S IT+ Sbjct: 204 PDVGFAIWHEGKLVEQWRATLAHGEPADAQALERRLADVLGEDFIRESVPVHLRSGAITV 263 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G G+P R A+Q + ++NGR V+DK + R+AY + + + PV L +++DP+ Sbjct: 264 TGRAGLPDAARSRADQQFCYVNGRFVRDKVLTHAARSAYEDVLHGQKQPVYALYVQMDPQ 323 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 +VDVNVHP K +RFR+ + + +++ A+ + + ++ D+ K Sbjct: 324 RVDVNVHPTKIEVRFRDSREVHQAVRHAVENALAAPRAQALASVPVAAAAAPASDSGRK- 382 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH---------- 403 ++ + Q + +E L + T + P + AT Sbjct: 383 ---QFQLPIWQAQAAIRFEERAGHKVSDLQALWGTPAAAPQPAMPAAATPPAAIEAPPLP 439 Query: 404 ---------------------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 + LG A AQIH YI++++ GLV+VD HAAHER+++E+ Sbjct: 440 AAAAAAAAAAASVPAAPTESAWPLGRAVAQIHGVYILAESAQGLVVVDMHAAHERIVYER 499 Query: 443 MRQDFNST-KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 ++ + ++ SQ LL P E A H + L LG++ F P +A+R +P Sbjct: 500 LKAQVDQGARLASQPLLIPATFAATPEEVATAESHADTLALLGLEIVPFSPRTLAVRAVP 559 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 L++ N +L R ++ E+ + +Q ILATMAC+G++R+ RK+ EMN LL Sbjct: 560 NTLAQGNPVELARSVLAELGQHDASTVVQRARNEILATMACHGAVRANRKLTIDEMNALL 619 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R+ME S QCNHGRPT+ +L + +++ LF R Sbjct: 620 RQMEVTERSDQCNHGRPTWRQLTVKELDALFLR 652 >gi|328676645|gb|AEB27515.1| DNA mismatch repair protein MutL [Francisella cf. novicida Fx1] Length = 600 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 198/596 (33%), Positives = 325/596 (54%), Gaps = 10/596 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E + NQIAAGE+IERPS +KELIEN++DA ++++ I GGKS +I DNG Sbjct: 10 QIKILPESLANQIAAGEVIERPSSVVKELIENAIDAGATQIIIEIQEGGKSLIRIRDNGK 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ H TSK+ D+ + + GFRGEAL SI +V+ L ++S+ + Sbjct: 70 GIAQQDLKLALAPHATSKVYTLDELEAVASMGFRGEALASIASVAKLKIISKHQNSQDAW 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ V GT +EV +LF+ PAR FLK + E I D++++ + Y Sbjct: 130 QINNQTREVVPAAHV---TGTTIEVSELFYNTPARRKFLKKDNTEFLHIYDLLKKYMLCY 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++F + R+ + +FI NA+ ++++ + L G+ Sbjct: 187 FGIAFKLIHNGKEVKDLLIAEEVQLKYNRVLDLYSREFIENAIYVDKQVGDAHLWGWVAS 246 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P FNR A+ +INGR ++DK + I+ AY + + RYP +L L+ID +VDVNV Sbjct: 247 PRFNRARADMQSFYINGRIIKDKIVSHAIKNAYKDVMYGNRYPAFLLYLDIDYCEVDVNV 306 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAKS +RFRN I +F+ +I KAI +++ + Q+ + P Sbjct: 307 HPAKSEVRFRNQKFIYDFLFGNINKAI----TTSADIKVSSHQQVISQERQTSNNNPLNI 362 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 +++ +E +T+ L + S++N+ ++ LG A QIH YI+ Sbjct: 363 GNMSLDISIDDEKEESSNTSLLDKYFNNQNSQENEIRISQQSKSNGLGQAICQIHGIYIL 422 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL-TPEIIDLLEGECALIMEHDE 478 SQ DG+V+VD HAAHER+++E+M++ +++ + L P L A + E+ E Sbjct: 423 SQVDDGVVLVDMHAAHERILYEEMKKTWHANADKFKQNLLMPLTCQLSSSIVAAVDENVE 482 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +LG + +AI +R P + K+I L+ +I E+ SS T +++ + +ILA Sbjct: 483 VFKKLGFEISVVADDAILVRSTPIYVKDKDIQTLITNIATELTSSSKTKSVEFYLNHILA 542 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T++C+ ++R+ K+ EMN LLR+ME NS QCNHGRPT++KL + ++ F R Sbjct: 543 TVSCHAAVRANDKLSISEMNHLLRQMETVENSGQCNHGRPTWVKLNFAQLDSFFLR 598 >gi|254246240|ref|ZP_04939561.1| DNA mismatch repair enzyme [Burkholderia cenocepacia PC184] gi|124871016|gb|EAY62732.1| DNA mismatch repair enzyme [Burkholderia cenocepacia PC184] Length = 667 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 193/650 (29%), Positives = 322/650 (49%), Gaps = 65/650 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA ++ + V+ GG ITD+G G Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGATTLRIVLEEGGVKRISITDDGCG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A+ RH TSKI ++ + T GFRGEAL SI +V+ +++ SR + Sbjct: 83 IPPDELALALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMSITSRTADAAHAMK 142 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A + GT +EVR+L F PAR FLKSEQ E ++IRR A+A P Sbjct: 143 I---DAQTGVLSPAAGSIGTTIEVRELHFNTPARRKFLKSEQTEFGHCLEMIRRAALARP 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N +R+++++G+ F + L+E++ + + G G+P Sbjct: 200 DVAISVLHNGKAVEHWNATEP----AQRVAKILGDSFATAHLPLDEQAGPLAVYGCAGLP 255 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L + P VDVNVH Sbjct: 256 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLVLPPEAVDVNVH 315 Query: 301 PAKSYIRFRNP----TIIRNFIIQSIQKA---------------INKKGISTSSVLSKKM 341 P+K +RFR+ + + + +++ + + +S L + Sbjct: 316 PSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAHLEPAPRGPASFLDTPL 375 Query: 342 ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT------------- 388 + S +++ ++++ R++ L + Sbjct: 376 GQGTSHTTGGTGGSSFSSPSSSSSAGNTWMRQARMTQGTLPVAQPLALYDALFGRKDSGA 435 Query: 389 ------------------------YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 P+ LG A QIH Y+++Q Sbjct: 436 GTPEGTTLIARDAADSTDAPVAPLPGFAAAPLAAGAHDEQPLGFALGQIHGIYVLAQNAY 495 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GLVIVD HAAHER+++E+ + + Q+LL P + E + E + L LG Sbjct: 496 GLVIVDMHAAHERILYEQFKNALADRTVAVQSLLLPISMTATPVEIGTVEEERDTLESLG 555 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 P +AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ Sbjct: 556 FDLAVLSPTTLAIRAVPALLKDADLQSLARAVLADLHAFGGSRVLTERQHELLGTLACHH 615 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++R+ R++ EMN LLR+ME + QCNHGRPT+ +L L+D+++LF R Sbjct: 616 AVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLNDLDRLFMR 665 >gi|319649470|ref|ZP_08003626.1| DNA mismatch repair protein [Bacillus sp. 2_A_57_CT2] gi|317398632|gb|EFV79314.1| DNA mismatch repair protein [Bacillus sp. 2_A_57_CT2] Length = 640 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 177/642 (27%), Positives = 306/642 (47%), Gaps = 55/642 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + + N+IAAGE++ERP+ +KEL+ENS+DA S+ +E G + +I DNG Sbjct: 3 KIIQLDDALSNKIAAGEVVERPASVVKELMENSIDAGSTIIEIEAEEAGLAKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A RH TSKI D D I T GFRGEALPSI +VS + + + + G Sbjct: 63 GIEEDDVLNAFHRHATSKIKDENDLFRIRTLGFRGEALPSIASVSRIEMKTSTGDD--GT 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G K+ + GT + V DLFF PARL ++K+ E ITDV+ R+A+A+ Sbjct: 121 RVVIEGGKVEVMEKAPGRKGTDLTVTDLFFNTPARLKYMKTIHTELGNITDVVNRLALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+ + K+ + NG+ + ++ + G + + V + S + + GY + Sbjct: 181 PEVAIRLIHNER---KLLQTNGNGDVRQVLAAIYGLNIVKKMVRIEASSLDFKISGYAAM 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I+ Y +P+GRYP+V+L +E+DP VDVNV Sbjct: 238 PEITRASRNYISTMINGRFIKNYSLAKAIQEGYHTLLPIGRYPIVLLNIEMDPLLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------------------VLS 338 HP+K +R + + +++ A K+ + S Sbjct: 298 HPSKMEVRLSKEHELNELVSDALKAAFKKEELIPSGFTQPKTMKPKSEQTALELDHLPEH 357 Query: 339 KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 ++ + SF ++ + + + L + DL + S + + E Sbjct: 358 REHVPSFVREAREDAIRQYPNGADPQSPQSLPGEPAAAEYPDLQDAPLIDLSPSAEELPE 417 Query: 399 SEATHYQ--------------------------LGIACAQIHQNYIISQTTDGLVIVDQH 432 ++ +Q Q+H YI +Q GL I+DQH Sbjct: 418 ADQHIFQPEEPRAAGLEQFLAETATVDEPSRVPPLYPIGQMHGTYIFAQNDRGLYIIDQH 477 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AA ER+ +E R+ + Q +L P + + I E+ +L ++G+ E+FG Sbjct: 478 AAQERIKYEYFREKVGQVESELQEMLIPLTFEYSTDDYIKIDEYKGELEKVGVFLEQFGH 537 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 N+ +R P L K +++ D+I++++ ++ E M+C SI++ + Sbjct: 538 NSFIVRSHPQWLPKGEEQEIIEDMIEQLLAMKRVD-IKKLREEAAIMMSCKASIKANHHL 596 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ E+ LL E+ ++ + C HGRP I ++EK+F R Sbjct: 597 RNDEIQALLDELRRSSDPFTCPHGRPIIIHYSTYEMEKMFKR 638 >gi|229168508|ref|ZP_04296231.1| DNA mismatch repair protein mutL [Bacillus cereus AH621] gi|228614914|gb|EEK72016.1| DNA mismatch repair protein mutL [Bacillus cereus AH621] Length = 647 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 304/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLSIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + + + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFKFEHTKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHLPKYATSLTNTQEKLFL 371 Q+ P L + S + + + Sbjct: 359 RESSMPNIVLPTGMDEKQEETTTVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSSKPVIE 418 Query: 372 QENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ-----LGIACAQIHQNYIISQTTDGL 426 Q R DD E + V E + Q+H YI +Q +GL Sbjct: 419 QTVREEKEWTSNDDDFELEELEEEVHEIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDNGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVTQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|114705763|ref|ZP_01438666.1| DNA mismatch repair protein [Fulvimarina pelagi HTCC2506] gi|114538609|gb|EAU41730.1| DNA mismatch repair protein [Fulvimarina pelagi HTCC2506] Length = 641 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 250/642 (38%), Positives = 386/642 (60%), Gaps = 49/642 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I +L E +I+QIAAGE++ERP+ +KEL+EN+LDA + R++ AGGGK+ ++TD+G Sbjct: 1 MPIVQLDEFLIDQIAAGEVVERPASVVKELLENALDAGARRIQIATAGGGKTLIRVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ +E+ +AV+RHCTSK++ I + GFRGEALPSIG+V+ L+L SR + + Sbjct: 61 RGVPKDELRLAVKRHCTSKLAGGLDKIMSLGFRGEALPSIGSVARLSLASRAEGASEAFE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + + P ++ GT VEVRDLF ++PARL FLKS++ E + ITD++RR AIA+P Sbjct: 121 VKVEAGRCDGPMPAGLSKGTTVEVRDLFQSVPARLKFLKSDRAEASAITDIVRRSAIAFP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F S +R + + + IS V+G+DF +NAV + ++ L G+ G+P Sbjct: 181 GVRFELSGPDRSRLVLEAAAPDDPLAR-ISDVVGKDFADNAVAIEAVREDVYLSGFAGLP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +F+RGN+ Y ++NGR V+D ++S ++ AY++ + GRYPV L +E+DP VDVNVH Sbjct: 240 SFDRGNSLAQYFYVNGRPVRDWMLVSALQGAYSDMMAKGRYPVAALFVELDPALVDVNVH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF-------HQDNAPK- 352 PAK+ +RFR+P ++R I+ +I++A+ +G+ S+V + +++ F Q+ A + Sbjct: 300 PAKADVRFRDPQLVRGLIVGAIREAMATEGVRGSTVAASGLMARFSAGPKREPQEQAGRF 359 Query: 353 ----------------------------THLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 T P + + F T D S Sbjct: 360 DGFSPGAPDIAMKPRQSFGASNLAGYEATKRPMTPFDPASAAYRPFEAGAFTETTDRQVS 419 Query: 385 DDPTYSEDNDP------------VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 + + Y LG A AQ+ +N+I+++T DGLV+VD H Sbjct: 420 SGFAEDGQTPFDAGLATEVFAGTADAAVVKSYPLGAAKAQLFENFILAETKDGLVLVDGH 479 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AAHERL++E+++ + T+I SQ LL PEI+DL EG+ + E E LG+ ERFGP Sbjct: 480 AAHERLVYERLKAALHGTQIASQMLLIPEIVDLSEGDADRLAEASEAFSVLGLHLERFGP 539 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 AIA+RE PAIL + + +L++D+ +E+ + T +++ RI+++ AT+AC+GS+R+GR++ Sbjct: 540 GAIAVRETPAILGQCDAKRLVKDLAEELAEFGTGDSVRSRIDSVAATIACHGSVRTGRRL 599 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + EMN LLREME P S CNHGRPTFI+LK +D+E LF R Sbjct: 600 KPEEMNALLREMEVTPGSGTCNHGRPTFIELKRADLEALFKR 641 >gi|291528991|emb|CBK94577.1| DNA mismatch repair protein MutL [Eubacterium rectale M104/1] Length = 648 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 183/651 (28%), Positives = 305/651 (46%), Gaps = 62/651 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I L+++ I++IAAGE++ERP +KEL+EN++DA S+ + I GG SF +ITDN Sbjct: 1 MPNIAILNQETIDKIAAGEVVERPCSVVKELVENAIDAGSTAITVEIKEGGISFIRITDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +++ +A RH TSKI +D + + GFRGEAL SI AV+ + L+++ T Sbjct: 61 GCGIERDQVAVAFYRHSTSKIRSAEDLLTVKSLGFRGEALSSISAVARVELITKTYDELT 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G K S + GT V+DLF+ +PAR FLK+ Q E + I+D++ ++A+ Sbjct: 121 GTRYVIEGSKELSNEEIGAPDGTTFIVKDLFYNVPARRKFLKTAQTEGSYISDMVEKLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P +SF F + S NGN + I + G + ++ +E+ + ++G+ Sbjct: 181 SHPDISFKFINNNQTKLH---TSGNGNRKDIIYHIFGREISSSLLEVKHECEYFKVEGFI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P RGN N FINGR V+ + I AY + +YP VL +DV Sbjct: 238 GKPVITRGNRNYENYFINGRYVKSNILSRAIEEAYKSFLMQHQYPFTVLYFTFFSE-LDV 296 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS----SVLSKKMISSFHQDNAPKT 353 NVHP K +RF N I + +I +++K + S + K I +++ P+ Sbjct: 297 NVHPTKMELRFDNNNEIYVELCDTIYAILSRKEMIPEVPVDSTPAPKKIVHEYKEPIPEP 356 Query: 354 HLPK-----------------------------YATSLTNTQEKLFLQENRLSTNDLLPS 384 + A + T+ L Q+ + S + + Sbjct: 357 FEKRRINEVRAAESRSVYGQSVTATVKNSTVKGPAVNEPLTENTLNQQKAKTSASTPVVH 416 Query: 385 DDPTYSEDNDPVEESEATHYQLGIA---------------------CAQIHQNYIISQTT 423 + + E G Q+ + Y + + Sbjct: 417 TGNSVELTPETSTSYEPAQAVTGTQQTLGDYDKVFLTESAKKQFSIIGQLFKTYWLIEFE 476 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 D L I+DQHAAHE++++EK + TSQ + P ++ L E ++ ++ + + Sbjct: 477 DKLYIIDQHAAHEKVLYEKTMARLANKDFTSQRISPPIVMTLDARESEMLEKYRPQIEQF 536 Query: 484 GIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY 543 G + E FG I IP L ++ L +++D+ + +T D I +A+M+C Sbjct: 537 GYEVEHFGGKEYMISAIPDNLFNIDMKDLFIEMLDDFSN-ATGRQTPDIITEKVASMSCK 595 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ K+ E+N+L+ E+ N C HGRPT I + +IEK F R Sbjct: 596 AAVKGNDKLTLPEINKLIDELLSLDNPYNCPHGRPTIISMSKYEIEKKFKR 646 >gi|220932003|ref|YP_002508911.1| DNA mismatch repair protein MutL [Halothermothrix orenii H 168] gi|254766169|sp|B8CX97|MUTL_HALOH RecName: Full=DNA mismatch repair protein mutL gi|219993313|gb|ACL69916.1| DNA mismatch repair protein MutL [Halothermothrix orenii H 168] Length = 644 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 193/646 (29%), Positives = 320/646 (49%), Gaps = 55/646 (8%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I++L E + NQI+AGE++ERP+ +KEL+ENSLDA S+++ I GGK ++ DN Sbjct: 1 MPEIKRLPESVANQISAGEVVERPASVVKELVENSLDAGSNKILIEIENGGKDLIRVKDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ S+EI +A R+ TSKI+D D ++ + GFRGEAL SI +VS L ++SR Sbjct: 61 GHGIPSDEIEIAFDRYATSKITDINDLYSLKSLGFRGEALASIASVSILDIISRTKSQTK 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 ++ + G K+ S P + GT + V+DLFF PAR +LK+ + E I+++I R A+ Sbjct: 121 AIKMRLKGGKVISKEPCGASVGTDIIVKDLFFNTPARYKYLKTTRNEFKHISNIITREAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 AYP V+FT K G + I + G++ + V+++ + I + GY Sbjct: 181 AYPGVNFTLIHNGRIVLK---TPGTGKTLDCIYAIYGKEMAQSLVKIDYEDRYIKVSGYI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + R N + F+N R V + + + AY +P G YPVV L L+++P VDV Sbjct: 238 SRPDYYRYNRSYEIFFVNKRAVHNSILNRGVEEAYQGLLPPGAYPVVFLNLKLNPILVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST----SSVLSKKMISSFHQDNAPKT 353 NVHP K ++F +I+ I I ++K S + + + + K Sbjct: 298 NVHPTKKEVKFSRDKVIKEVIQNGINIELSKLDKSPRLKRNINPLNRDDKTKDKSEYQKI 357 Query: 354 HLPKYATSLTNTQEKLFLQENRLS------------------------------------ 377 LP+ +TN + +N+ Sbjct: 358 KLPEDKEQITNKSSDAGILKNQNPLDSQDSILLPSKKNGFYSKKNSQVSQNKFMDINNKL 417 Query: 378 ---------TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D D +DN E + QI YII++ DGL I Sbjct: 418 EKTEINDNYKKDKHYKTDSINIKDNSIKENKNKMDIPIKRVLGQIKNTYIIAEGRDGLYI 477 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 +DQH AHER++++ + +N+++I SQ L+ P I+ E ++ + L ++G K E Sbjct: 478 IDQHNAHERILYQSFIEKYNNSEIVSQPLVVPVNIETTAPEAEVLKSYLPQLEKMGFKLE 537 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 FG N+ +RE+P+++ K++ +++R++ID++++ + I I++ M+C G+I++ Sbjct: 538 VFGINSFIVREVPSLIKKRSNKRVVREVIDKLLEHDKAMKPSELINEIISYMSCRGAIKA 597 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 G + E +++ + K N +C HGRP I + DI K GR Sbjct: 598 GEYLDKKEAEQIIEGLFKTDNPYRCPHGRPIIIHITEDDINKGMGR 643 >gi|254372542|ref|ZP_04988031.1| DNA mismatch repair enzyme with ATPase activity [Francisella tularensis subsp. novicida GA99-3549] gi|151570269|gb|EDN35923.1| DNA mismatch repair enzyme with ATPase activity [Francisella novicida GA99-3549] Length = 600 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 201/596 (33%), Positives = 322/596 (54%), Gaps = 10/596 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E + NQIAAGE+IERPS +KELIEN++DA ++++ I GGKS +I DNG Sbjct: 10 QIKILPESLANQIAAGEVIERPSSVVKELIENAIDAGATQIIIEIQEGGKSLIRIRDNGK 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ H TSK+ D+ + + GFRGEAL SI +V+ L ++S+ + Sbjct: 70 GIAQQDLKLALAPHATSKVYTLDELEAVASMGFRGEALASIASVAKLKIISKHQNSQDAW 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ P A GT +EV +LF+ PAR FLK + E I D++++ + Y Sbjct: 130 QINNQTREV---VPAAHVTGTTIEVSELFYNTPARRKFLKKDNTEFLHIYDLLKKYMLCY 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++F + R+ + +FI NA+ ++++ + L G+ Sbjct: 187 FGIAFKLIHNGKEVKDLLIAEEVQLKYNRVLDLYSREFIENAIYVDKQVGDAHLWGWVAS 246 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P FNR A+ +INGR V+DK + I+ AY + + RYP +L L+ID R+VDVNV Sbjct: 247 PRFNRARADMQNFYINGRIVKDKIVSHAIKNAYKDVMYGNRYPAFLLYLDIDYREVDVNV 306 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAKS +RFRN I +F+ +I KAI S Q+ + P Sbjct: 307 HPAKSEVRFRNQKFIYDFLFGNINKAITTNADIKVS----SHQQVISQERQTSNNNPLNI 362 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 +++ +E +T L + S++N+ ++ LG A QIH YI+ Sbjct: 363 GNMSLDISIDDEKEESSNTTLLDKYFNNQNSQENEIRISQQSKSNGLGQAICQIHGIYIL 422 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL-TPEIIDLLEGECALIMEHDE 478 SQ DG+V+VD HAAHER+++E+M++ +++ + L P L A + E+ E Sbjct: 423 SQVEDGVVLVDMHAAHERILYEEMKKTWHANADKFKQNLLMPLTCQLSSSIVAAVDENVE 482 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +LG + +AI +R P + K+I L+ +I E+ S T +++ + +ILA Sbjct: 483 VFKKLGFEISVVADDAILVRSTPIYVKDKDIQTLITNIATELTSLSKTKSVEFYLNHILA 542 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T++C+ ++R+ K+ EMN LLR+ME NS QCNHGRPT++KL + ++ F R Sbjct: 543 TVSCHAAVRANDKLSISEMNHLLRQMETVENSGQCNHGRPTWVKLNFAQLDSFFLR 598 >gi|163941456|ref|YP_001646340.1| DNA mismatch repair protein [Bacillus weihenstephanensis KBAB4] gi|229890121|sp|A9VS12|MUTL_BACWK RecName: Full=DNA mismatch repair protein mutL gi|163863653|gb|ABY44712.1| DNA mismatch repair protein MutL [Bacillus weihenstephanensis KBAB4] Length = 644 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 184/645 (28%), Positives = 304/645 (47%), Gaps = 57/645 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLSIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + + + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQSAFKKIQLIPDAGVTTKKKEKDESVQEQFKFEHTKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHLPKYATSLTNTQEKLFL 371 Q+ P L + S + + + Sbjct: 359 RESSMPNIVLPTGMDEKQEETTTVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSSKPETV 418 Query: 372 QENR--LSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 +E + S +D ++ E Q+H YI +Q +GL ++ Sbjct: 419 REEKEWTSNDDDFELEELEEEVGEIEEIEMNGNDLPPLYPIGQMHGTYIFAQNDNGLYMI 478 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ E+ Sbjct: 479 DQHAAQERINYEYFRDKVGRVTQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLFLEQ 538 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 FG + +R P K +++ +++++++ ++ E M+C SI++ Sbjct: 539 FGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASIKAN 597 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 QYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 642 >gi|224499740|ref|ZP_03668089.1| DNA mismatch repair protein [Listeria monocytogenes Finland 1988] Length = 603 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 193/602 (32%), Positives = 308/602 (51%), Gaps = 15/602 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL + + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLAMETST-GETKGTS 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G ++ + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGISIAKKSIPVKAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK--------MISSFHQDNAPK 352 PAK +R + I Q I++A +K + +SKK I ++N P Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKEAFHKLQLIPEGEISKKQKEVQKSEQIQMSFEENKPA 360 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 +P + T + ++ + +L + E EE Q Sbjct: 361 KEIPTLFSKPTIPEYVPSDEDAPREDDFILETMPSYEPELQAEQEEHPKERIPKMYPIGQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +H YI +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E Sbjct: 421 MHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPADEYVR 480 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ Sbjct: 481 LEEQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAP-SISIHKL 539 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 EN M+C SI++ + + +M LL + + + C HGRP I+ ++EK+F Sbjct: 540 RENTAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMF 599 Query: 593 GR 594 R Sbjct: 600 KR 601 >gi|311068228|ref|YP_003973151.1| DNA mismatch repair protein [Bacillus atrophaeus 1942] gi|310868745|gb|ADP32220.1| DNA mismatch repair protein [Bacillus atrophaeus 1942] Length = 625 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 185/626 (29%), Positives = 303/626 (48%), Gaps = 38/626 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K+ +LS+++ N+IAAGE++ERP+ +KEL+EN++DA S+ +E I G + ++ DNG Sbjct: 3 KVIQLSDELSNKIAAGEVVERPASVVKELVENAIDANSTVIEIDIEEAGLASIRVLDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +E+ A +RH TSKI D D + T GFRGEALPSI +VSHL + + G Sbjct: 63 GMENEDCKRAFRRHATSKIKDENDLFRVRTLGFRGEALPSIASVSHLEIKTST-GEGAGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G I S + GT + V +LFF PARL ++K+ E ITDV+ R+A+A+ Sbjct: 122 QLMLQGGNIISETRSSGRKGTEITVTNLFFNTPARLKYMKTVHTELGNITDVVNRIALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + + NG+ ++ + G V L+ S + ++GY + Sbjct: 182 PEVSIRLRHQGK---NLLQTTGNGDVRHVLAAIYGMATAKKMVPLHVSSLDFDVKGYIAL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR +++ ++ + Y +P+GR+P+ + + +DP VDVNV Sbjct: 239 PEITRASRNYMSSVVNGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA--------- 350 HP+K +R T + I I+ ++ + S+ L KK + Sbjct: 299 HPSKLEVRLSKETELHELIRDGIKDVFKQQQLIPSAQLPKKSAPIIKNEQQFMNFDTRPA 358 Query: 351 ----PKTHLPKYAT------------------SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 KT P Y+ + + L + T + Sbjct: 359 EQKPEKTSEPSYSPMKLSSVVKEPAETEEEIRTDIPVPDPLIETDQGDHTAFAEHQPEAA 418 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 SE E S++ + Q+H YI++Q +GL I+DQHAA ER+ +E R+ Sbjct: 419 ESEQELVQEHSQSERVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREKVG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + Q ++ P E +I +H +L +G+ E FG N+ +R PA K Sbjct: 479 EVEPEVQDMIVPLTFHYSTNEALIIEQHQYELENVGVFLEPFGSNSYIVRCHPAWFPKGE 538 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 L+ +II +++DS ++ E M+C GSI++ R +++ E+ LL E+ Sbjct: 539 EALLIEEIIQQVLDSKNID-IKKLREEAAIMMSCKGSIKANRHLRNDEIKALLDELRGTS 597 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP I ++EK+F R Sbjct: 598 DPFTCPHGRPIIIHHSTYEMEKMFKR 623 >gi|167765540|ref|ZP_02437604.1| hypothetical protein CLOSS21_00034 [Clostridium sp. SS2/1] gi|167712725|gb|EDS23304.1| hypothetical protein CLOSS21_00034 [Clostridium sp. SS2/1] Length = 645 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 185/645 (28%), Positives = 303/645 (46%), Gaps = 56/645 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L +K I+ IAAGE+IERP+ +KEL+EN++DA+++ V I GG + ++TDNG Sbjct: 3 KIQLLDQKTIDNIAAGEVIERPASVVKELVENAVDAKANAVTVEIKDGGMTLIRVTDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A RH TSKI +D ++ + GFRGEAL SI AV+ + L+++ ++ +G Sbjct: 63 GIPKDQVKTAFLRHATSKIRSVEDLLSVSSLGFRGEALSSISAVAQVELVTKTAESFSGV 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I G + + + GT V++LF+ PAR FLKS E + ++ +A+++ Sbjct: 123 SYKIYGGEEEAFEDIGAPDGTTFLVKNLFYNTPARRKFLKSATTEAGYVEQMMVHIALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF F N+ + S NG + I + G D + L ++ ++ + G+ Sbjct: 183 PEISFKFIHNNKNK---IYTSGNGKVKDIIYHIYGRDVAGALIPLEAQNEDVKVTGFVAK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +RGN N FINGR ++ I I Y RYP V L +ID +DVNV Sbjct: 240 PYVSRGNRNYESYFINGRYIKSSIIYKAIEEGYRTFTMKHRYPFVCLDFKIDQELLDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS------------------------- 334 HP K IRFRN I ++ +++ A+ +K + Sbjct: 300 HPTKMEIRFRNGREIYELVVDAVRAALLQKDLVQDVLRETPKKKELPKTKEVKKPEPFEV 359 Query: 335 ---------------------SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE 373 + + + + P P + S NT++ + Sbjct: 360 NRRKEEVQKVDQQGQGVQQQVEKQRQGVQQQIEKPSHPVKKTPTASESSKNTKKPTYAGL 419 Query: 374 NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI----ACAQIHQNYIISQTTDGLVIV 429 N + P N + Q+ + Y + + D L I+ Sbjct: 420 NYNTQKKEFPQYKTDELSSNQMTLREDPVFSVQARADRKILGQLFKTYWLIEYEDQLFIM 479 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQHAAHE++ +E++ ++F +I SQ L P ++ + E + + + LG E Sbjct: 480 DQHAAHEKVNYERLMKNFKEKEIYSQRLEPPMVVTVSMTEAEALTRYKDAFAGLGFTIES 539 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 FG N IRE+PA L L +++D + + T + I + +ATMAC SI+ Sbjct: 540 FGGNEYCIREVPANLYGIGERDLFMELLDAVSQENGTLD-TEVIASKIATMACKMSIKGN 598 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ +E+ LL E+ K N QC HGRPT IK+ +I+K F R Sbjct: 599 QRVSLMEVEHLLDELMKLENPYQCPHGRPTIIKMSKYEIDKKFKR 643 >gi|118497176|ref|YP_898226.1| DNA mismatch repair protein [Francisella tularensis subsp. novicida U112] gi|194323474|ref|ZP_03057251.1| DNA mismatch repair protein MutL [Francisella tularensis subsp. novicida FTE] gi|118423082|gb|ABK89472.1| DNA mismatch repair enzyme with ATPase activity [Francisella novicida U112] gi|194322329|gb|EDX19810.1| DNA mismatch repair protein MutL [Francisella tularensis subsp. novicida FTE] Length = 600 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 198/596 (33%), Positives = 326/596 (54%), Gaps = 10/596 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E + NQIAAGE+IERPS +KELIEN++DA ++++ I GGKS +I DNG Sbjct: 10 QIKILPESLANQIAAGEVIERPSSVVKELIENAIDAGATQIIIEIQEGGKSLIRIRDNGK 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ H TSK+ D+ + + GFRGEAL SI +V+ L ++S+ + Sbjct: 70 GIAQQDLKLALAPHATSKVYTLDELEAVASMGFRGEALASIASVAKLKIISKHQNSQDAW 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ V GT +EV +LF+ PAR FLK + E I D++++ + Y Sbjct: 130 QINNQTREVVPAAHV---TGTTIEVSELFYNTPARRKFLKKDNTEFLHIYDLLKKYMLCY 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++F + R+ + +FI NA+ ++++ + L G+ Sbjct: 187 FGIAFKLIHNGKEVKDLLIAEEVQLKYNRVLDLYSREFIENAIYVDKQVGDAHLWGWVAS 246 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P FNR A+ +INGR ++DK + I+ AY + + RYP +L L+ID R+VDVNV Sbjct: 247 PRFNRARADMQSFYINGRIIKDKIVSHAIKNAYKDVMYGNRYPAFLLYLDIDYREVDVNV 306 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAKS +RFRN I +F+ +I KAI +++ + Q+ + P Sbjct: 307 HPAKSEVRFRNQKFIYDFLFGNINKAI----TTSADIKVSSHQQVISQERQTSNNNPLNI 362 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 +++ +E +T+ L + S++N+ ++ LG A QIH YI+ Sbjct: 363 GNMSLDISIDDEKEESSNTSLLDKYFNNQNSQENEIRISQQSKSNGLGQAICQIHGIYIL 422 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL-TPEIIDLLEGECALIMEHDE 478 SQ +G+V+VD HAAHER+++E+M++ +++ + L P L A + E+ E Sbjct: 423 SQVENGVVLVDMHAAHERILYEEMKKTWHANADKFKQNLLMPLTCQLSSSIVAAVDENVE 482 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +LG + +AI +R P + K+I L+ +I E+ SS T +++ + +ILA Sbjct: 483 VFKKLGFEISVVADDAILVRSTPIYVKDKDIQTLITNIATELTSSSKTKSIEFYLNHILA 542 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T++C+ ++R+ K+ EMN LLR+ME NS QCNHGRPT++KL + ++ F R Sbjct: 543 TVSCHAAVRANDKLSIPEMNHLLRQMETVENSGQCNHGRPTWVKLNFAQLDSFFLR 598 >gi|157829199|ref|YP_001495441.1| DNA mismatch repair protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|166232105|sp|A8GU58|MUTL_RICRS RecName: Full=DNA mismatch repair protein mutL gi|157801680|gb|ABV76933.1| DNA mismatch repair protein [Rickettsia rickettsii str. 'Sheila Smith'] Length = 610 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 243/610 (39%), Positives = 372/610 (60%), Gaps = 16/610 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE IN+IAAGE+IERP+ +KEL+EN++DA S++++ ++ GK+ I+D+G Sbjct: 1 MTIKFLSESTINRIAAGEVIERPASVVKELVENAVDASSTKIDIILERAGKNLIIISDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK + DF NI+TFGFRGEALPSI A+S + + S+ + Sbjct: 61 IGMTDKELEIAVERHTTSKFDESDFLNINTFGFRGEALPSIAAISKMLITSKKRDADKAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G V N GT +E+RDLFF PARL FL++++ E V++++A+A+ Sbjct: 121 QIKLIGGNEKQVTISVHNEGTKIEIRDLFFATPARLKFLRADKTELAATVGVVKKIALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 PK+SF+ + N K+ Q+ + N +RI VIG+DFI NA ++ K+ + ++ GYT Sbjct: 181 PKISFSLTHDGKNLLKLKGQNKDAETNLKQRIIDVIGDDFIKNAAYIDFKTPDFSICGYT 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 PT+NR ++ ++FIN R V+DK + +R AY + + RYP+ + L+I+P+ VDV Sbjct: 241 SSPTYNRASSEDQFLFINNRPVKDKLLQIALRVAYQDYLARDRYPICAIFLQINPQLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD----NAPKT 353 NVHPAK+ +RF +P +RN +I++I+ A+ K TS+ ++ + F +P + Sbjct: 301 NVHPAKAEVRFHDPDYVRNLLIEAIKNALTNKSHVTSTTIASDALELFKNPLVNKQSPVS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN-------DLLPSDDPTYSEDNDPVEESEATHYQL 406 + + + + N + N D L +N E + Sbjct: 361 KVINVNSKSADYRPTTHSTLNTVPQNHVCQKLIDTLSHAKIEQEVENRIEHEQQIRKQYK 420 Query: 407 -GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 G A AQ+H YIISQT D +VI DQHAAH+RL +EK++ + ++ Q LL PEI++L Sbjct: 421 LGAAKAQLHTTYIISQTEDSIVITDQHAAHKRLGYEKIKHYLKTEELIKQRLLIPEIVEL 480 Query: 466 L-EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 E + + +H E L++LG+ E+FG +I + EIP IL N+ +L++D+ D + D Sbjct: 481 PNEKKADCLYDHREKLYKLGLTLEKFGEKSIIVTEIPNILGDVNVQKLIQDLADHLSDFG 540 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 L + IE++ T AC+ SIR+GRK+ + EMN LLR+ME S QCNHGRPT+I+LK Sbjct: 541 KNIALTELIEHVTETYACHYSIRAGRKLSADEMNALLRQMENTLLSGQCNHGRPTYIELK 600 Query: 585 LSDIEKLFGR 594 L DIE+LFGR Sbjct: 601 LKDIERLFGR 610 >gi|229018964|ref|ZP_04175806.1| DNA mismatch repair protein mutL [Bacillus cereus AH1273] gi|229025207|ref|ZP_04181631.1| DNA mismatch repair protein mutL [Bacillus cereus AH1272] gi|228736140|gb|EEL86711.1| DNA mismatch repair protein mutL [Bacillus cereus AH1272] gi|228742292|gb|EEL92450.1| DNA mismatch repair protein mutL [Bacillus cereus AH1273] Length = 647 Score = 515 bits (1326), Expect = e-143, Method: Composition-based stats. Identities = 185/648 (28%), Positives = 303/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLMIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + + + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ ++ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAVQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQSAFKKIQLIPDAGVTTKKKEKDESVQEQFKFEHTKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHLPKYATSLTNTQEKLFL 371 Q+ P L + S + + + Sbjct: 359 RESSMPNIVLPTGMDEKQEETTTVKRPAQLWQPPKQEWQPPQSLVREEQSWQPSSKPVIE 418 Query: 372 QENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ-----LGIACAQIHQNYIISQTTDGL 426 + R DD E + V E + Q+H YI +Q +GL Sbjct: 419 ETVREEKEWTSNDDDFELEELEEEVPEIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDNGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|15895111|ref|NP_348460.1| DNA mismatch repair protein [Clostridium acetobutylicum ATCC 824] gi|20455120|sp|Q97I20|MUTL_CLOAB RecName: Full=DNA mismatch repair protein mutL gi|15024811|gb|AAK79800.1|AE007692_8 DNA mismatch repair enzyme, MutL [Clostridium acetobutylicum ATCC 824] gi|325509250|gb|ADZ20886.1| DNA mismatch repair protein [Clostridium acetobutylicum EA 2018] Length = 622 Score = 514 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 190/624 (30%), Positives = 322/624 (51%), Gaps = 34/624 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+I LSE N+IAAGE++ERP +KEL+ENS+DA + + I GG++ ++ D+G Sbjct: 1 MRINILSEDTSNKIAAGEVVERPFSVVKELVENSIDAGAKTINIEIENGGRTLIKVLDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 +G+ ++I A H TSKIS D +I+T GFRGEALPSI +VS TL SR +N G Sbjct: 61 YGIDKDDIEKAFMPHATSKISKLQDIYSINTLGFRGEALPSIASVSKTTLKSRTKENEFG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I+ISG + ++ N GT +EVRDLF+ +PAR FLKS E + I+D++ R+A+A Sbjct: 121 REISISGGSVDYIKDCGTNIGTHIEVRDLFYNVPAREKFLKSTAKEASSISDIVNRLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + ++SF ++ N + I + G+ +N + ++ +++ GY G Sbjct: 181 HSEISFRLINNGK---RVITTYATDNLIDTIRAIYGKKICDNVISFERHTDLVSVHGYVG 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +RG+ N +FIN R +++K I + + A + + ++P ++ L+I P VDVN Sbjct: 238 NAEISRGSRNNQSIFINKRYIKNKLITAAVENAVKSFMMINKFPFFIIFLDIFPEFVDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQ----KAINKKGISTSSVLSKKMISSFHQD------ 348 VHP KS ++F+N I I ++ ++ + + + + +D Sbjct: 298 VHPTKSEVKFQNERDIFKIIFDTVHEGIRNSLKESFKVEALKEEEDKLFDIKEDVITKNE 357 Query: 349 ---------NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE-DNDPVEE 398 K P + + + +N N DD + + +E Sbjct: 358 IKHDDKIDGYIKKDSFPVPVQIPIDLKRPIENYDNSTKENKDRSFDDFREKDIIKETSQE 417 Query: 399 SEATH--------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 E + Q + YI++++ + L I+DQHAAHE+++FEK R+D + Sbjct: 418 KETYDIITNKKAKFPELRVIGQFNNTYILAESFEELYIIDQHAAHEKILFEKYREDIKNK 477 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 ++SQ L+TP +++LL + E+ E G E FG N +AI+E+P L K + Sbjct: 478 GVSSQILITPSVVELLPEDFIYYDENKEVFKNAGFVIEYFGDNTVAIKEVPLFLGKPLVK 537 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 L +IID + + + T + + +I AT AC ++++ ++ EM L++++ + Sbjct: 538 DLFLEIIDNLKNMGSGETSEVKYRSI-ATAACKSAVKAYHELTHDEMKTLIQDLRFAEDP 596 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT ++L ++D EK F R Sbjct: 597 FNCPHGRPTIVRLTVTDFEKKFKR 620 >gi|262372217|ref|ZP_06065496.1| DNA mismatch repair protein MutL [Acinetobacter junii SH205] gi|262312242|gb|EEY93327.1| DNA mismatch repair protein MutL [Acinetobacter junii SH205] Length = 657 Score = 514 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 212/648 (32%), Positives = 343/648 (52%), Gaps = 55/648 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERPS +KEL+ENS+DA ++ + +A GG + +I DNG Sbjct: 8 RIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIIRVAQGGSTLIEIIDNGH 67 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ S+++P+AV RH TSKI S+D I + GFRGEAL SI AVS LTL S G Sbjct: 68 GIHSDDLPLAVMRHATSKIKTSEDLHAIVSLGFRGEALASIAAVSRLTLTSSQDDQGIGY 127 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ V+ VA GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 128 QVEVNGTAFDHQQVQAVAAQKGTHIRVQDLFFNVPARRKFLKKPSTEFGHIEEIVRRLAL 187 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + F + R + + +R+ Q++G+ FI NA ++ +S + L G+ Sbjct: 188 THFDIRFVLEHNDNIRLNLPVADSGELRYQRVQQLLGQQFIQNAYWIDAESINMRLSGWL 247 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + ++ +L LE+DP +DV Sbjct: 248 GHPSDARAQADLQYVYVNGRIVKDKTISHALRMAYDGILHGHQHSSYLLFLEVDPENIDV 307 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS----KKMISSFHQDNAPK- 352 NVHP K IRF N + F+ ++ +++ +++ + ++ ++F+ + PK Sbjct: 308 NVHPTKHEIRFLNQREVHEFVRHYAKETLSQFQTASADLSQAMKVEESTTNFNYQSQPKY 367 Query: 353 --------------------------------------------THLPKYATSLT-NTQE 367 P Y S N Sbjct: 368 QEQFNLHRNHVETEFSINDQNQISTDLLTEFNQSRPQAVQYNSVPQEPSYNGSFQLNNAL 427 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLV 427 K +L R D + + ++ + LGIA AQ+H YI++Q T+GL+ Sbjct: 428 KTYLAPLRDEKTSFEHEDTSSVKNGDLEGFKTRVDEFPLGIAIAQLHGIYILAQNTEGLI 487 Query: 428 IVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 IVD HAAHER++ ++M+ ++ + TSQ LL P+++ + + I E L RLG++ Sbjct: 488 IVDMHAAHERILLQQMKSAWDKPEFWTSQQLLIPKVVSITRMQAVRIEELQSQLQRLGLE 547 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 ++G + +R +PAIL K + +L+ ++++++ + L + + +LA MAC+G++ Sbjct: 548 INQYGDEQVIVRGVPAILQKADFDRLIPELLNDLDPNDEARGLLQKRDELLAGMACHGAV 607 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R+ R++ EMN LLR+ME+ +SQCNHGRPT+ L ++KLF R Sbjct: 608 RAHRQLSLSEMNALLRQMEQTEFASQCNHGRPTWRAFPLHQLDKLFAR 655 >gi|254374003|ref|ZP_04989485.1| hypothetical protein FTDG_00161 [Francisella novicida GA99-3548] gi|151571723|gb|EDN37377.1| hypothetical protein FTDG_00161 [Francisella novicida GA99-3548] Length = 600 Score = 514 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 199/596 (33%), Positives = 326/596 (54%), Gaps = 10/596 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E + NQIAAGE+IERPS +KELIEN++DA ++++ I GGKS +I DNG Sbjct: 10 QIKILPESLANQIAAGEVIERPSSVVKELIENAIDAGATQIIIEIQEGGKSLIRIRDNGK 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ H TSK+ D+ + + GFRGEAL SI +V+ L ++S+ + Sbjct: 70 GIAQQDLKLALAPHATSKVYTLDELEAVASMGFRGEALASIASVAKLKIISKHQNSQDAW 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ V GT +EV +LF+ PAR FLK + E I D++++ + Y Sbjct: 130 QINNQTREVVPAAHV---TGTTIEVSELFYNTPARRKFLKKDNTEFLHIYDLLKKYMLCY 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++F + R+ + +FI NA+ ++++ + L G+ Sbjct: 187 FGIAFKLIHNGKEVKDLLIAEEVQLKYNRVLDLYSREFIENAIYVDKQVGDAHLWGWVAS 246 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P FNR A+ +INGR ++DK + I+ AY + + RYP +L L+ID R+VDVNV Sbjct: 247 PRFNRARADMQSFYINGRIIKDKIVSHAIKNAYKDVMYGNRYPAFLLYLDIDYREVDVNV 306 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAKS +RFRN I +F+ +I KAI +++ + Q+ + P Sbjct: 307 HPAKSEVRFRNQKFIYDFLFGNINKAI----TTSTDIKVSSHQQVISQERQTSNNNPLNI 362 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 +++ +E +T+ L + S++N+ ++ LG A QIH YI+ Sbjct: 363 GNMSLDISIDDEKEESSNTSLLDKYFNNQNSQENEIRISQQSKSNGLGQAICQIHGIYIL 422 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL-TPEIIDLLEGECALIMEHDE 478 SQ DG+V+VD HAAHER+++E+M++ +++ + L P L A + E+ E Sbjct: 423 SQVEDGVVLVDMHAAHERILYEEMKKTWHANADKFKQNLLMPLTCQLSSSIVAAVDENVE 482 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +LG + +AI +R P + K+I L+ +I E+ SS T +++ + +ILA Sbjct: 483 VFKKLGFEISVVADDAILVRSTPIYVKDKDIQTLITNIATELTSSSKTKSVEFYLNHILA 542 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T++C+ ++R+ K+ EMN LLR+ME NS QCNHGRPT++KL + ++ F R Sbjct: 543 TVSCHAAVRANDKLSISEMNHLLRQMETVENSGQCNHGRPTWVKLNFAQLDSFFLR 598 >gi|319794619|ref|YP_004156259.1| DNA mismatch repair protein mutl [Variovorax paradoxus EPS] gi|315597082|gb|ADU38148.1| DNA mismatch repair protein MutL [Variovorax paradoxus EPS] Length = 631 Score = 514 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 200/621 (32%), Positives = 325/621 (52%), Gaps = 34/621 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR+L +++I+QIAAGE++ERP+ ++EL++N+LDA +S+V +A GG + D+G Sbjct: 15 PIRELPDELISQIAAGEVVERPASVVRELLDNALDAGASQVTVRLASGGVRLISVEDDGL 74 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+ +A++RH TSKI+ DD + T GFRGEAL +I A++ L+++SR ++ Sbjct: 75 GIPREELTVALRRHATSKIASLDDLETVGTMGFRGEALAAINAIAELSILSRFGGADSAF 134 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ RPVA + GT VEVR+LFF PAR FLK++ E + +RR A+A Sbjct: 135 ALDGRTGEL---RPVARSVGTTVEVRELFFATPARRKFLKTDATELAHCIEAVRRHALAR 191 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V F+ + +R++ + +DF+ +V + + + G GI Sbjct: 192 PEVGFSVWHDGKLVEQWRAA---DAREQRLADALSDDFVAKSVAVEHLGGVVRVVGRAGI 248 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R +Q + ++NGR V+DK + +R+AY + + R P+ L LEIDP +VDVNV Sbjct: 249 PDAARSRGDQQFFYVNGRFVRDKVLSHAVRSAYEDVLHGQRQPIYALYLEIDPSRVDVNV 308 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RFR+ + + +I+ A+ + S F + P++ Sbjct: 309 HPTKIEVRFRDGREVHQAVRHAIEDALAAPRAGDAVAPSGPPEPFFRETKLPESASWSQP 368 Query: 360 TSLTNTQEK---LFLQENRLSTNDLLPSDDPTYSEDN----------------------- 393 +E+ F T++L + D T S Sbjct: 369 AMNFVARERGAGDFEAMWPRRTDELGHAPDSTPSHWPLTGAAPMAFRAPVGLPPSPAEDA 428 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 + + LG A AQ+ YI+++ T GLV+VD HAAHER+++E+++ + IT Sbjct: 429 SAPAATNDEAWPLGRALAQLQGIYILAENTQGLVVVDMHAAHERIVYERLKTQLDGAAIT 488 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 SQ LL P E A E L LG++ F +A+R +P L+ + +L Sbjct: 489 SQPLLIPATFAATPQEVATAEACAEVLPTLGLEITAFSARTLAVRAVPGTLADGDPVELA 548 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 R ++ E+ + +Q +L+TMAC+G++R+ RK+ EMN LLR+ME S QC Sbjct: 549 RSVLAELGQHDASTVVQRAQNELLSTMACHGAVRANRKLTIDEMNALLRQMEATERSDQC 608 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 NHGRPT+ +L + +++ LF R Sbjct: 609 NHGRPTWRQLSIRELDTLFMR 629 >gi|218532518|ref|YP_002423334.1| DNA mismatch repair protein MutL [Methylobacterium chloromethanicum CM4] gi|218524821|gb|ACK85406.1| DNA mismatch repair protein MutL [Methylobacterium chloromethanicum CM4] Length = 661 Score = 514 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 234/646 (36%), Positives = 363/646 (56%), Gaps = 56/646 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R+L ++++IAAGE++ERP+ A+KEL+EN++DA + +E I GGG+ ++ D+G GM Sbjct: 16 RRLDPILVDRIAAGEVVERPASAVKELVENAIDAGARSIEVAIEGGGRRLIRVIDDGIGM 75 Query: 64 TSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 +++ +AV+RH TSK+ D D + I + GFRGEALPSIGAVS LT+ SR G + Sbjct: 76 GPDDLALAVERHATSKLPDGDLTRIGSLGFRGEALPSIGAVSRLTITSRTADGE-GVSLT 134 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + VRP GT +EV +LF PARL FLK+++ ET +++++RR+A+A P++ Sbjct: 135 LDSGVKGPVRPAPAARGTRIEVTELFAATPARLKFLKTDRAETAAVSEILRRLAVAQPQI 194 Query: 183 SFTFSTIKSNRYKMNF--QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 FT T + + R+ V+G DF NAV ++ L G+ G+P Sbjct: 195 RFTLRTESGSPTVFPAESEPGPAALLRRLGAVLGPDFPGNAVPVDMAREGFALAGHVGLP 254 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TF+RG A+ Y +NGR V+D+ +L +R AYA+T+ R+PV+ L L DP VDVNVH Sbjct: 255 TFHRGAASHIYFVVNGRPVRDRLLLGAVRGAYADTMSSDRHPVLALHLTCDPALVDVNVH 314 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD------------ 348 PAK+ +RFR P ++R I+ +I +A+ + G +SS ++ + + Sbjct: 315 PAKTELRFREPGLVRALIVSAIHEALRRAGARSSSTGTQAALDALRAGAGMGGAPPMAGV 374 Query: 349 -----------------------------NAPKTHLPKYATSLTNTQEKLFLQENRLSTN 379 AP + P + T L + Sbjct: 375 GRFAVHSGASTASALNPRPASRLFSGPSVAAPAGYRPALRPAFTEDHPGFAETPQALFSA 434 Query: 380 DLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 DL P + E E+ + LG A AQIH+ YI++QT DG+V+VDQHAAHERL Sbjct: 435 DLAPPGADLRPDPEAGSEAETHPETHPLGAARAQIHETYIVAQTRDGIVLVDQHAAHERL 494 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 ++E+++++ + +Q LL P+++++ E ++E +L RLG+ E FGP A+ +R Sbjct: 495 VYERLKRERAGGGVLAQGLLIPDVVEMAPEEADRLVEAAPELERLGLTLEAFGPGAVLVR 554 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDS----------STTYTLQDRIENILATMACYGSIRS 548 +P+ L+ ++ L+ D++D + S + R++ IL+ M+C+GSIR+ Sbjct: 555 SVPSALAGGSVKGLVLDVLDALAASGVEEGGPAGAGDPDPVSRRLDAILSRMSCHGSIRA 614 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 GR+++ EMN LLREME P S CNHGRPTF+ L L+DIE+LFGR Sbjct: 615 GRRLKPEEMNALLREMEATPLSGSCNHGRPTFVSLGLADIERLFGR 660 >gi|208778969|ref|ZP_03246315.1| DNA mismatch repair protein MutL [Francisella novicida FTG] gi|208744769|gb|EDZ91067.1| DNA mismatch repair protein MutL [Francisella novicida FTG] Length = 600 Score = 514 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 200/596 (33%), Positives = 324/596 (54%), Gaps = 10/596 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E + NQIAAGE+IERPS +KELIEN++DA ++++ I GGKS +I DNG Sbjct: 10 QIKILPESLANQIAAGEVIERPSSVVKELIENAIDAGATQIIIEIQEGGKSLIRIRDNGK 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ H TSK+ D+ + + GFRGEAL SI +V+ L ++S+ + Sbjct: 70 GIAQQDLKLALAPHATSKVYTLDELEAVASMGFRGEALASIASVAKLKIISKHQNSQDAW 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ V GT +EV +LF+ PAR FLK + E I D++++ + Y Sbjct: 130 QINNQTREVVPAAHV---TGTTIEVSELFYNTPARRKFLKKDNTEFLHIYDLLKKYMLCY 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F + R+ + +FI NA+ ++++ + L G+ Sbjct: 187 FGIDFKLIHNGKEVKDLLIAEEVQLKYNRVLDLYSREFIENAIYVDKQVGDAHLWGWVAS 246 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P FNR A+ +INGR ++DK + I+ AY + + RYP +L L+ID R+VDVNV Sbjct: 247 PRFNRARADMQSFYINGRIIKDKIVSHAIKNAYKDVMYGNRYPAFLLYLDIDYREVDVNV 306 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAKS +RFRN I +F+ +I KAI +++ + Q+ + P Sbjct: 307 HPAKSEVRFRNQKFIYDFLFGNINKAI----TTSADIKVSSHQQVISQERQTSNNNPLNI 362 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 +++ +E +T+ L + S++N+ ++ LG A QIH YI+ Sbjct: 363 GNMSLDISIDDEKEESSNTSLLDKYFNNQNSQENEIRISQQSKSNGLGQAICQIHGIYIL 422 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL-TPEIIDLLEGECALIMEHDE 478 SQ DG+V+VD HAAHER+++E+M++ +++ + L P L A + E+ E Sbjct: 423 SQVEDGVVLVDMHAAHERILYEEMKKTWHANADKFKQNLLMPLTCQLSSSIVAAVDENAE 482 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +LG + +AI IR P + K+I L+ I E+ SS T +++ + +ILA Sbjct: 483 VFKKLGFEISVVADDAILIRSTPIYVKDKDIQTLITSIATELTSSSKTKSVEFYLNHILA 542 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T++C+ ++R+ K+ EMN LLR+ME NS QCNHGRPT++KL + ++ F R Sbjct: 543 TVSCHAAVRANDKLSIPEMNHLLRQMETVENSGQCNHGRPTWVKLNFAQLDSFFLR 598 >gi|116618669|ref|YP_819040.1| DNA mismatch repair protein MutL [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097516|gb|ABJ62667.1| DNA mismatch repair protein MutL [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 648 Score = 514 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 180/636 (28%), Positives = 309/636 (48%), Gaps = 46/636 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+I +LS + NQIAAGE+IERP+ +KEL+EN++DA +++++ ++ G+S ++ DNG Sbjct: 1 MRIHELSNLLANQIAAGEVIERPASVVKELVENAIDAGATQIDVIVEEAGESLIRVVDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++P+A RH TSKIS+ D NI + GFRGEALPSI A+S +TL + +G Sbjct: 61 EGINPEDVPLAFTRHATSKISNRHDLFNIMSLGFRGEALPSIAAISDVTLNTTTQDAPSG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I G K S P GT+V VRDLF+ PARL +LK Q E + I D++ R+A++ Sbjct: 121 IMYHIKGGKQVSATPANGRRGTVVSVRDLFYNTPARLKYLKRPQTELSRIADIMNRIALS 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 Y V+FT + N + N +GN I+ + G D + + ++ + G+ Sbjct: 181 YTNVAFTVTADGRNILQTN---GDGNQQRVIAAIYGRDVAQKMRAITGEDDDFNITGFVS 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +P RG+ + + +NGR +++ + + + Y + +GR+P+ V+ + DP VDVN Sbjct: 238 LPELTRGSRDYLTILVNGRFIKNFSVSNAVIRGYGSKLMVGRFPMGVININTDPLLVDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS--VLSKKMISSFHQDNAPKTHLP 356 VHP K+ IR + II +I+ + + + L + ++ + APK P Sbjct: 298 VHPQKAEIRLSKEAELSALIIDTIKSCFADENLIPDAYENLYGQAQTNKIEPPAPKQVAP 357 Query: 357 KYATSLTNTQE-----------------------KLFLQENRLSTNDLLPSDDPTYSEDN 393 + T F Q+ N + D+ T Sbjct: 358 WAKPDMEQTIAINTGMDSNEVVINQEADLMNHAVNEFTQKYAHEPNLPIFDDEITVQVSE 417 Query: 394 D---------------PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 D + + + + Q+H ++ +Q+++G ++DQHAA ER+ Sbjct: 418 DISSYNKPDIPTQEELDISPKKPSGFPSLEYIGQMHGTFLFAQSSEGFYLIDQHAAQERV 477 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E R++ Q +L P I+ + I + + +L +G+ E FGP + +R Sbjct: 478 KYEYYRKEIGQVGTDKQRMLVPITINYSVADMLKIADKEAELEAIGLTLEPFGPTTVIVR 537 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P K + +++++D I+ T+ + E M+C S+R+ + ++ Sbjct: 538 EHPTWFEKGQETETIKEMVDWILRDGN-LTVAEFRERTAIMMSCKRSVRANMHLSDLQAR 596 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL + N C HGRP L+++EK+F R Sbjct: 597 TLLESLASTENPYNCPHGRPVVTSFTLTEMEKMFKR 632 >gi|319761780|ref|YP_004125717.1| DNA mismatch repair protein mutl [Alicycliphilus denitrificans BC] gi|317116341|gb|ADU98829.1| DNA mismatch repair protein MutL [Alicycliphilus denitrificans BC] Length = 658 Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats. Identities = 204/637 (32%), Positives = 336/637 (52%), Gaps = 51/637 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ A++EL++N+LDA +++V + GG + D+G Sbjct: 27 PIRDLPDELISQIAAGEVVERPASAVRELVDNALDAGATQVTVRLLAGGVRLIAVEDDGM 86 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A++RH TSKI + D ++ T GFRGEAL +I +VS + L+SR Q + Sbjct: 87 GIPRDELPIALRRHATSKIGNLHDLESVATMGFRGEALAAIASVSEMALLSRTAQQASAF 146 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ RP A + GT VEV++LFF+ PAR FLK++ E + +RR A+A Sbjct: 147 MLDARSGEL---RPAARSQGTTVEVKELFFSTPARRKFLKTDATELAHCVEAVRRHALAR 203 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN------FPERISQVIGEDFINNAVELNEKSNEITL 233 P V F + +G R++ V+GEDFI +V ++ +S IT+ Sbjct: 204 PDVGFAIWHEGKLVEQWRATLAHGEPADAQALERRLADVLGEDFIRESVPVHLRSGAITV 263 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G G+P R A+Q + ++NGR V+DK + R+AY + + + PV L +++DP+ Sbjct: 264 TGRAGLPDAARSRADQQFCYVNGRFVRDKVLTHAARSAYEDVLHGQKQPVYALYVQMDPQ 323 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 +VDVNVHP K +RFR+ + + +++ A+ + + ++ D+ K Sbjct: 324 RVDVNVHPTKIEVRFRDSREVHQAVRHAVENALAAPRAQALASVPVAAAAAPASDSGRK- 382 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH---------- 403 ++ + Q + +E L + T + P + AT Sbjct: 383 ---QFQLPIWQAQAAIRFEERAGHKVSDLQALWGTPAAAPQPAMPAAATPPAAIEAPPLP 439 Query: 404 -------------------------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 + LG A AQIH YI++++ GLV+VD HAAHER+ Sbjct: 440 AAAAAAAAAAAAAAASVPAAPTESAWPLGRAVAQIHGVYILAESAQGLVVVDMHAAHERI 499 Query: 439 IFEKMRQDFNST-KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 ++E+++ + ++ SQ LL P E A H + L LG++ F P +A+ Sbjct: 500 VYERLKAQVDQGARLASQPLLIPATFAATPEEVATAESHADTLALLGLEIVPFSPRTLAV 559 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 R +P L++ N +L R ++ E+ + +Q ILATMAC+G++R+ RK+ EM Sbjct: 560 RAVPNTLAQGNPVELARSVLAELGQHDASTVVQRARNEILATMACHGAVRANRKLTIDEM 619 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N LLR+ME S QCNHGRPT+ +L + +++ LF R Sbjct: 620 NALLRQMEVTERSDQCNHGRPTWRQLTVKELDALFLR 656 >gi|163853662|ref|YP_001641705.1| DNA mismatch repair protein MutL [Methylobacterium extorquens PA1] gi|163665267|gb|ABY32634.1| DNA mismatch repair protein MutL [Methylobacterium extorquens PA1] Length = 687 Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats. Identities = 234/647 (36%), Positives = 364/647 (56%), Gaps = 57/647 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R+L ++++IAAGE++ERP+ A+KEL+EN++DA + +E I GGG+ ++ D+G GM Sbjct: 41 RRLDPILVDRIAAGEVVERPASAVKELVENAIDAGARSIEVAIEGGGRRLIRVVDDGIGM 100 Query: 64 TSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 +++ +AV+RH TSK+ D D + I + GFRGEALPSIGAVS LT+ SR G + Sbjct: 101 GPDDLALAVERHATSKLPDGDLTRIGSLGFRGEALPSIGAVSRLTITSRTADGE-GVSLT 159 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + VRP + GT +EV +LF PARL FLK+++ ET +++++RR+A+A P++ Sbjct: 160 LDSGVKGPVRPAPASRGTRIEVTELFAATPARLKFLKTDRAETAAVSEILRRLAVAQPRI 219 Query: 183 SFTFSTIKSNRYKMNF--QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 FT T + + R+ V+G DF NAV ++ L G+ G+P Sbjct: 220 RFTLRTESGSPTVFPAESEPGPAALLRRLGAVLGPDFPGNAVPVDMAREGFALAGHVGLP 279 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TF+RG A+ + +NGR V+D+ +L +R AYA+T+ R+PV+ L L DP VDVNVH Sbjct: 280 TFHRGAASHIHFVVNGRPVRDRLLLGAVRGAYADTMSSDRHPVLALHLTCDPALVDVNVH 339 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD------------ 348 PAK+ +RFR P ++R I+ +I +A+ + G +SS ++ ++ + Sbjct: 340 PAKTELRFREPGLVRALIVSAIHEALRRAGARSSSTGTQAVLDALRAGAGMGSAPPMAAG 399 Query: 349 ------------------------------NAPKTHLPKYATSLTNTQEKLFLQENRLST 378 AP + P + T L + Sbjct: 400 VGRFAVHSGASTASALNPRPASRLFSGPSVAAPAGYRPAPRPAFTEDHPGFAETPQALFS 459 Query: 379 NDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 DL P E E E+ + LG A AQIH+ YI++QT DG+V+VDQHAAHER Sbjct: 460 ADLAPPGADLRPEPEAVSEAETHPEAHPLGAARAQIHETYIVAQTRDGIVLVDQHAAHER 519 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 L++E+++ + + +Q LL P+++++ E ++E +L RLG+ E FGP A+ + Sbjct: 520 LVYERLKSERAGGGVLAQGLLIPDVVEMAPEEADRLVEAAPELERLGLTLEAFGPGAVLV 579 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDS----------STTYTLQDRIENILATMACYGSIR 547 R +P+ L+ ++ L+ D++D + S + R++ IL+ M+C+GSIR Sbjct: 580 RSVPSALAGGSVKGLVLDVLDALAASGVEEGGPAGAGDPDPVSRRLDAILSRMSCHGSIR 639 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +GR+++ EMN LLREME P S CNHGRPTF+ L L+DIE+LFGR Sbjct: 640 AGRRLKPEEMNALLREMEATPLSGSCNHGRPTFVSLGLADIERLFGR 686 >gi|157804273|ref|YP_001492822.1| DNA mismatch repair protein [Rickettsia canadensis str. McKiel] gi|166232104|sp|A8F0A4|MUTL_RICCK RecName: Full=DNA mismatch repair protein mutL gi|157785536|gb|ABV74037.1| DNA mismatch repair protein [Rickettsia canadensis str. McKiel] Length = 610 Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats. Identities = 247/611 (40%), Positives = 376/611 (61%), Gaps = 18/611 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE IN+IAAGE+IERP+ +KEL+EN++DA S+++ ++ GK+ I+D+G Sbjct: 1 MTIKFLSESTINRIAAGEVIERPASVVKELVENAVDASSTKINIILERAGKNLIIISDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK+ + DF IHTFGFRGEALPSI A+S + + S+ + Sbjct: 61 IGMTDKELEIAVERHTTSKLDESDFLKIHTFGFRGEALPSIAAISKMLITSKKRGTDKAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G + N GT +E+RDLFF PARL FL++++ E + D+++++A+A+ Sbjct: 121 QIKLIGGNEKQITISVHNEGTKIEIRDLFFATPARLKFLRADKTELAVTVDIVKKIALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P++SF+ + N K+ Q+ + N +RI VIG+DFI NA ++ K + ++ GYT Sbjct: 181 PEISFSLTNDSKNLLKLKGQNKDAETNLKQRIIDVIGDDFIKNAAYIDFKILDFSICGYT 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 IPT+NR ++ ++FIN R V+DK + +R AY + + RYP+ + L+IDP+ VDV Sbjct: 241 SIPTYNRASSEDQFLFINNRPVKDKLLQVALRVAYQDYLARDRYPLCAIFLQIDPQFVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK+ +RF +P +RN +I++I+ A+ K TS+ ++ + F K Sbjct: 301 NVHPAKAEVRFHDPNYVRNLLIEAIKNALANKSHVTSTTIASDTLKLFKNPLINKQPTIN 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPT-----------YSEDNDPVEESEATHYQL 406 ++ N++ + + +T +L + E + +E + H Q Sbjct: 361 KEVNV-NSKSVDYRSYSSANTPKILQNHICQKLIDTLPHAKVEQEVENRIEHKQQIHKQY 419 Query: 407 --GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 G A AQ+H YIISQT D +VI DQHAAHERL +EK++ ++ Q LL PEI++ Sbjct: 420 KLGAAKAQLHTTYIISQTEDSIVITDQHAAHERLGYEKIKSYIKMDELIKQRLLIPEIVE 479 Query: 465 LL-EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 L E + +H E L +LG+ E+FG +I + EIP IL N+ +L++D+ D + D Sbjct: 480 LPNEKRADCLYDHREKLSKLGLTLEKFGEKSIIVTEIPNILGDVNVQKLIQDLADHLSDF 539 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 S L + IE++ T AC+ SIR+GRK+ + EMN LLR+ME P S QCNHGRPT+I+L Sbjct: 540 SENVALMELIEHVTETYACHYSIRAGRKLSADEMNALLRQMENTPFSGQCNHGRPTYIEL 599 Query: 584 KLSDIEKLFGR 594 KL DIE+LFGR Sbjct: 600 KLKDIERLFGR 610 >gi|296132999|ref|YP_003640246.1| DNA mismatch repair protein MutL [Thermincola sp. JR] gi|296031577|gb|ADG82345.1| DNA mismatch repair protein MutL [Thermincola potens JR] Length = 627 Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats. Identities = 180/628 (28%), Positives = 296/628 (47%), Gaps = 40/628 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L + N+IAAGE++ERP+ IKEL+EN+LDA SS++E I+ GG + DNG Sbjct: 3 KIKILDDFTANKIAAGEVVERPASVIKELVENALDAGSSKIEIQISRGGLDKITVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ +A RH TSKI + D I T GFRGEALPSI AVS + + +RP GA Sbjct: 63 GMDREDARLAFHRHATSKIRNDADLDAIATLGFRGEALPSIAAVSTVEVRTRPHNEVCGA 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G KI + GT + V +LF +PARL +KS +E I+DV+ ++A+AY Sbjct: 123 RLIVEGGKIVKDEDIGCPAGTTITVSNLFANVPARLKNIKSVSLEAGHISDVVSKLAVAY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF+ +K S NG+ + I+ + G + + +N + + I + GY Sbjct: 183 PEVSFSLQHDNRFLFK---TSGNGDMLDIIASLYGTETARALLPINAERDGIGINGYIAR 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ R N +N R V+ + + + Y I GRYPV L + + +D NV Sbjct: 240 PSVTRSTRNHQTFIVNRRIVKSRPLSQALEQGYHSLIMTGRYPVAFLNIHLPYNLIDPNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK------- 352 HPAK +R I + + +++ A++ + + + + S N + Sbjct: 300 HPAKMEVRLFVLDKISDLLSSAVKVALSSNTLIPETKIPVEKPSGIQNRNQAQYVQQFLD 359 Query: 353 -----------------------THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 LP + + E + L D Sbjct: 360 VDEGHYHGKQAECSLVKEGSPVLAELPDRSIADEPQDEPQKEPQKEPQDIPLNMLLDLPR 419 Query: 390 SEDNDPVEESEATHYQL--GIACAQIHQNYIISQTTD-GLVIVDQHAAHERLIFEKMRQD 446 D + QI YI++Q + GL ++DQHAAHER+++EK Q Sbjct: 420 RISLDTPYNYFPKDKVIAGLRPIGQIDCTYIVAQGREAGLYLIDQHAAHERILYEKNMQV 479 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 + SQ L P+ I+L E +++ + + +G E FG ++ +R +P Sbjct: 480 PTTN--YSQLLAIPQHIELTHLEAQVLITNILEFQAIGFVIEHFGGDSFLLRGVPGGFPP 537 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 ++ D++D + T ++ E+++ M+C +I++G ++ +M +LL ++ Sbjct: 538 GKEKKIFLDLLDYFFSNQHKLTNKELREDLIIMMSCKAAIKAGDRLLQGQMEKLLADLSN 597 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT I + ++EK+F R Sbjct: 598 TELPYTCPHGRPTVIHISGYELEKMFKR 625 >gi|311104119|ref|YP_003976972.1| DNA mismatch repair protein MutL [Achromobacter xylosoxidans A8] gi|310758808|gb|ADP14257.1| DNA mismatch repair protein MutL [Achromobacter xylosoxidans A8] Length = 650 Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats. Identities = 205/650 (31%), Positives = 336/650 (51%), Gaps = 64/650 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L + +I+QIAAGE+IERP+ +KE++EN++DA +E + GGG +TD+G Sbjct: 6 SILALPDLLISQIAAGEVIERPASVLKEILENAIDAGGRAIEVRLEGGGIRRIAVTDDGG 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+P+A+ RH TSKI + ++ + GFRGEAL SI +V+ +T++SR Sbjct: 66 GIPPEELPLALARHATSKIRSLNELESVASMGFRGEALASIASVAQVTIISRTRDGEHAW 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ P + PGT V+VR LF +PAR FL+SE E D + R+A+A+ Sbjct: 126 QIDAGSMQV---SPASGPPGTTVDVRQLFDAVPARRKFLRSEATEFGHCVDAMERIALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++F + + +RI V+G +F + + L+ ++L G Sbjct: 183 PQIAFRLFHHDRAQRQWLPAEPP----QRIRDVLGAEFAEHGLLLSHSVGTVSLAGMITR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT R A++ Y+++NGR V+D+ + +R AYA+ + R P VL L+IDP VDVNV Sbjct: 239 PTAARARADRQYLYVNGRYVRDRTVSHALRAAYADVLHGDRQPAYVLFLDIDPAAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS----FHQDNAPKTHL 355 HPAK +RFR+ + F+ ++ + + + G +++ V + + F P Sbjct: 299 HPAKHEVRFRDSGAVHRFVSHAVGQTLAQTGGASAVVAPAQNDDADDAGFETVARPAASA 358 Query: 356 -------------------------------------PKYATSLTNTQEKLFLQENRLST 378 P A +TQ L Sbjct: 359 EGAAPQAAPYAPAASPMADTPRPAYNGGGLSSSYGLRPSPAPQRAHTQVPFRLHAEPAGI 418 Query: 379 NDLLPSDDPTYSEDNDPVEESEAT--------------HYQLGIACAQIHQNYIISQTTD 424 +++ + + + LG+A AQ+H YI++QT Sbjct: 419 PAADWQSLYRPLDEDSAAKTAPLREPAPAPATALPADEEHPLGMALAQLHGIYILAQTRR 478 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 G+V+VD HAAHER+++E+++ ++ + Q LL P + E + AL+ E ++ L+ LG Sbjct: 479 GIVLVDMHAAHERVVYEQLKHALDARSLPRQDLLVPVVFHAQEKDVALVEEFEDQLNELG 538 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 + GP +IA+R +PAIL++ +I L R ++ ++ + L ++ +L+TMAC+G Sbjct: 539 FEMRPSGPTSIAVRSVPAILARGDIETLARAVLRDLGAVGVSRLLTEQRNELLSTMACHG 598 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 S+R+ RK+ EMN LLR+ME + QCNHGRPT+I+ +SD++KLF R Sbjct: 599 SVRANRKLTIEEMNGLLRQMEATERADQCNHGRPTWIQWSVSDLDKLFLR 648 >gi|165933924|ref|YP_001650713.1| DNA mismatch repair protein [Rickettsia rickettsii str. Iowa] gi|189030407|sp|B0BVP7|MUTL_RICRO RecName: Full=DNA mismatch repair protein mutL gi|165909011|gb|ABY73307.1| DNA mismatch repair protein [Rickettsia rickettsii str. Iowa] Length = 610 Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats. Identities = 243/610 (39%), Positives = 372/610 (60%), Gaps = 16/610 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE IN+IAAGE+IERP+ +KEL+EN++DA S++++ ++ GK+ I+D+G Sbjct: 1 MTIKFLSESTINRIAAGEVIERPASVVKELVENAVDASSTKIDIILERAGKNLIIISDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK + DF NI+TFGFRGEALPSI A+S + + S+ + Sbjct: 61 IGMTDKELEIAVERHTTSKFDESDFLNINTFGFRGEALPSIAAISKMLITSKKRDADKAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G V N GT +E+RDLFF PARL FL++++ E V++++A+A+ Sbjct: 121 QIKLIGGNEKQVTISVHNEGTKIEIRDLFFATPARLKFLRADKTELAATVGVVKKIALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 PK+SF+ + N K+ Q+ + N +RI VIG+DFI NA ++ K+ + ++ GYT Sbjct: 181 PKISFSLTHDGKNLLKLKGQNKDAETNLKQRIIDVIGDDFIKNAAYIDFKTPDFSICGYT 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 PT+NR ++ ++FIN R V+DK + +R AY + + RYP+ + L+I+P+ VDV Sbjct: 241 SSPTYNRASSEDQFLFINNRPVKDKLLQIALRVAYQDYLARDRYPICAIFLQINPQLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD----NAPKT 353 NVHPAK+ +RF +P +RN +I++I+ A+ K TS+ ++ + F +P + Sbjct: 301 NVHPAKAEVRFHDPDYVRNLLIEAIKNALTNKSHVTSTTIASDALELFKNPLVNKQSPVS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN-------DLLPSDDPTYSEDNDPVEESEATHYQL 406 + + + + N + N D L +N E + Sbjct: 361 KVINVNSKSADYRPTTHSILNTVPQNHVCQKLIDTLSHAKIEQEVENRIEHEQQIRKQYK 420 Query: 407 -GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 G A AQ+H YIISQT D +VI DQHAAH+RL +EK++ + ++ Q LL PEI++L Sbjct: 421 LGAAKAQLHTTYIISQTEDSIVITDQHAAHKRLGYEKIKDYLKTEELIKQRLLIPEIVEL 480 Query: 466 L-EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 E + + +H E L++LG+ E+FG +I + EIP IL N+ +L++D+ D + D Sbjct: 481 PNEKKADCLYDHREKLYKLGLTLEKFGEKSIIVTEIPNILGDVNVQKLIQDLADHLSDFG 540 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 L + IE++ T AC+ SIR+GRK+ + EMN LLR+ME S QCNHGRPT+I+LK Sbjct: 541 KNIALTELIEHVTETYACHYSIRAGRKLSADEMNALLRQMENTLLSGQCNHGRPTYIELK 600 Query: 585 LSDIEKLFGR 594 L DIE+LFGR Sbjct: 601 LKDIERLFGR 610 >gi|254563596|ref|YP_003070691.1| DNA mismatch repair protein mutL [Methylobacterium extorquens DM4] gi|254270874|emb|CAX26879.1| DNA mismatch repair protein mutL [Methylobacterium extorquens DM4] Length = 662 Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats. Identities = 234/647 (36%), Positives = 364/647 (56%), Gaps = 57/647 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R+L ++++IAAGE++ERP+ A+KEL+EN++DA + +E I GGG+ ++ D+G GM Sbjct: 16 RRLDPILVDRIAAGEVVERPASAVKELVENAIDAGARSIEVAIEGGGRRLIRVVDDGIGM 75 Query: 64 TSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 ++++ +AV+RH TSK+ D D + I + GFRGEALPSIGAVS LT+ SR G + Sbjct: 76 GADDLALAVERHATSKLPDGDLTRIGSLGFRGEALPSIGAVSRLTITSRTADGE-GVSLT 134 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + VRP GT +EV +LF PARL FLK+++ ET +++++RR+A+A P++ Sbjct: 135 LDSGVKGPVRPAPAARGTRIEVTELFAATPARLKFLKTDRAETAAVSEILRRLAVAQPQI 194 Query: 183 SFTFSTIKSNRYKMNF--QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 FT T + + R+ V+G DF NAV ++ L G+ G+P Sbjct: 195 RFTLRTESGSPTVFPAESEPGPAALLRRLGAVLGPDFPGNAVPVDMAREGFALAGHVGLP 254 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TF+RG A+ + +NGR V+D+ +L +R AYA+T+ R+PV+ L L DP VDVNVH Sbjct: 255 TFHRGAASHIHFVVNGRPVRDRLLLGAVRGAYADTMSSDRHPVLALHLTCDPALVDVNVH 314 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD------------ 348 PAK+ +RFR P ++R I+ +I +A+ + G +SS ++ + + Sbjct: 315 PAKTELRFREPGLVRALIVSAIHEALRRAGARSSSTGTQAALDALRAGAGMGSAPPMAAG 374 Query: 349 ------------------------------NAPKTHLPKYATSLTNTQEKLFLQENRLST 378 AP + P + T L + Sbjct: 375 MGQFAVHSGASTASALNPRPASRLFSGPSVAAPAGYRPAPRPAFTEDHPGFAETPQALFS 434 Query: 379 NDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 DL P E E E+ + LG A AQIH+ YI++QT DG+V+VDQHAAHER Sbjct: 435 ADLAPPGADLRPEPEMLSEAETHPETHPLGAARAQIHETYIVAQTRDGIVLVDQHAAHER 494 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 L++E+++++ + +Q LL P+++++ E ++E +L RLG+ E FGP A+ + Sbjct: 495 LVYERLKRERAGGGVLAQGLLIPDVVEMAPEEADRLVEAAPELERLGLTLEAFGPGAVLV 554 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDS----------STTYTLQDRIENILATMACYGSIR 547 R +P+ L+ ++ L+ D++D + S + R++ IL+ M+C+GSIR Sbjct: 555 RSVPSALAGGSVKGLVLDVLDALAASGVEEGGPAGAGDPDPVSRRLDAILSRMSCHGSIR 614 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +GR+++ EMN LLREME P S CNHGRPTF+ L L+DIE+LFGR Sbjct: 615 AGRRLKPEEMNALLREMEATPLSGSCNHGRPTFVSLGLADIERLFGR 661 >gi|320160707|ref|YP_004173931.1| DNA mismatch repair protein MutL [Anaerolinea thermophila UNI-1] gi|319994560|dbj|BAJ63331.1| DNA mismatch repair protein MutL [Anaerolinea thermophila UNI-1] Length = 586 Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats. Identities = 193/598 (32%), Positives = 316/598 (52%), Gaps = 20/598 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L E++ +QIAAGE++ERP+ +KELIEN+LDA + ++ + G+ ++ D+G Sbjct: 1 MPIHLLPEEVASQIAAGEVVERPASVVKELIENALDAHARQIVVRVENAGRRAIEVADDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ +AV RH TSK+ ++D I T GFRGEAL SI +VSH +L+SRP + Sbjct: 61 DGIPQSELALAVMRHATSKLQTAEDLFRIATLGFRGEALASIASVSHFSLVSRPAHQSVA 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 A+I + G KI +V V GT+V V DLFF +PARL FLK +Q E I ++ R A+A Sbjct: 121 ARIRVDGGKIGTVEVVGAPVGTLVRVEDLFFNVPARLKFLKRDQTERQQIDALVTRYALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 YP+V F + ++ + NGN E ++Q+ + +E+ + +++ G+T Sbjct: 181 YPQVRFQLFHDGTPIFQ---TTGNGNRREVLAQLYDVEISRQMLEVEYEDEMVSVSGFTS 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 R N + F+NGR VQD + + + AY + +GRYP+ +L + + P +VDVN Sbjct: 238 PVGLTRSNRKEITFFVNGRWVQDTALSTALLQAYHTLLMVGRYPMAILFINLHPEEVDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH-QDNAPKTHLPK 357 VHP K+ +RFRNP + + + +++++++ S V P + + Sbjct: 298 VHPTKAEVRFRNPDRVFSAVSRAVRRSLMISNPVPSVVPPSVWQRPLSTPQIDPAWEMSR 357 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 A +L T E+ + +L + P+ Q+ Y Sbjct: 358 QAQNLWTTSEQTGETTVSPTPENLPQATQSPLPSGVLPL----------LRLVGQVAMAY 407 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 ++++ DGL ++DQHAAHER++FE+ I +Q LL P ++ L + L+ + Sbjct: 408 LVAEGPDGLYLIDQHAAHERVLFERF-IQKKGEGIPAQALLEPALVHLSPSQARLLEDEV 466 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 + L+RLG E FGP+ + IPA+LS + Q +R ++++ + T LQ +E L Sbjct: 467 DTLNRLGFHIEPFGPSTFRVSAIPALLSGADPVQAVRAVVEDFEEDET--PLQSEVEARL 524 Query: 538 ATMAC-YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C ++++G+ + E LLR++E + C HGRPT I L +E+ FGR Sbjct: 525 IARICKRTAVKAGQVLSPEEQRALLRDLEACQSPRTCPHGRPTMIHLSADLLERQFGR 582 >gi|240141086|ref|YP_002965566.1| DNA mismatch repair protein mutL [Methylobacterium extorquens AM1] gi|240011063|gb|ACS42289.1| DNA mismatch repair protein mutL [Methylobacterium extorquens AM1] Length = 662 Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats. Identities = 233/647 (36%), Positives = 365/647 (56%), Gaps = 57/647 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R+L ++++IAAGE++ERP+ A+KEL+EN++DA + +E I GGG+ ++ D+G GM Sbjct: 16 RRLDPILVDRIAAGEVVERPASAVKELVENAIDAGARSIEVAIEGGGRRLIRVIDDGIGM 75 Query: 64 TSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 ++++ +AV+RH TSK+ D D + I + GFRGEALPSIGAVS LT+ SR G + Sbjct: 76 GADDLALAVERHATSKLPDGDLTRIGSLGFRGEALPSIGAVSRLTITSRTADGE-GVSLT 134 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + VRP + GT +EV +LF PARL FLK+++ ET +++++RR+A+A P++ Sbjct: 135 LDSGVKGPVRPAPASRGTRIEVTELFAATPARLKFLKTDRAETAAVSEILRRLAVAQPQI 194 Query: 183 SFTFSTIKSNRYKMNF--QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 FT T + + R+ V+G DF NAV ++ L G+ G+P Sbjct: 195 RFTLRTESGSPTVFPAESEPGPAALLRRLGAVLGPDFPGNAVPVDMAREGFALAGHVGLP 254 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TF+RG A+ + +NGR V+D+ +L +R AYA+T+ R+PV+ L L DP VDVNVH Sbjct: 255 TFHRGAASHIHFVVNGRPVRDRLLLGAVRGAYADTMSSDRHPVLALHLICDPALVDVNVH 314 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN----------- 349 PAK+ +RFR P ++R I+ +I +A+ + G +SS ++ + + Sbjct: 315 PAKTELRFREPGLVRALIVSAIHEALRRAGARSSSTGTQAALDALRAGTGMGGAPPMAAG 374 Query: 350 -------------------------------APKTHLPKYATSLTNTQEKLFLQENRLST 378 AP + P + T L + Sbjct: 375 VGRFAVHSGASTASALNPRPASRLFSGPSVAAPAGYRPAPRPAFTEDHPGFAETPQALFS 434 Query: 379 NDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 DL P + E E+ + LG A AQIH+ YI++QT DG+V+VDQHAAHER Sbjct: 435 ADLAPPGADLRPDPEAGSEAETHPETHPLGAARAQIHETYIVAQTRDGIVLVDQHAAHER 494 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 L++E+++++ + +Q LL P+++++ E ++E +L RLG+ E FGP A+ + Sbjct: 495 LVYERLKRERAGGGVLAQGLLIPDVVEMAPEEADRLVEAAPELERLGLTLEAFGPGAVLV 554 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDS----------STTYTLQDRIENILATMACYGSIR 547 R +P+ L+ ++ L+ D++D + S + R++ IL+ M+C+GSIR Sbjct: 555 RSVPSALAGGSVKGLVLDVLDALAASGVEEGGPAGAGDPDPVSRRLDAILSRMSCHGSIR 614 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +GR+++ EMN LLREME P S CNHGRPTF+ L L+DIE+LFGR Sbjct: 615 AGRRLKPEEMNALLREMEATPLSGSCNHGRPTFVSLGLADIERLFGR 661 >gi|21674838|ref|NP_662903.1| DNA mismatch repair protein MutL [Chlorobium tepidum TLS] gi|25090732|sp|Q8KAX3|MUTL_CHLTE RecName: Full=DNA mismatch repair protein mutL gi|21648059|gb|AAM73245.1| DNA mismatch repair protein MutL [Chlorobium tepidum TLS] Length = 624 Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats. Identities = 190/626 (30%), Positives = 314/626 (50%), Gaps = 38/626 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +L + + N+I+AGE+++RP+ +KELIENS+DA +SR+ +I G+ QI DNG Sbjct: 3 SIARLPDIVANKISAGEVVQRPASVVKELIENSIDAGASRITVIIKDAGRQLVQIIDNGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM S+++ ++V+R TSKIS DD + T GFRGEAL SI +VSH L +R N+ G Sbjct: 63 GMESDDVLLSVERFATSKISEVDDLDALRTLGFRGEALASISSVSHFELKTRKAGNSLGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G I + +P PGT + VR+LFF +PAR FLKS E I + ++ ++Y Sbjct: 123 LLRSDGGVIETPQPAQCEPGTSIAVRNLFFNVPARRKFLKSNATEFKHIHETVKAFVLSY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + + + ER+S GE F + +E+ E+++ +T+ GY G Sbjct: 183 PEIEWRMMNDDEELFHFRT----SDVRERLSHFYGEGFGESLIEVTEENDYMTIGGYLGK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P Y FIN R +Q++ ++ ++ AY E + + P +L L +DP VDVNV Sbjct: 239 PGMMVRQKYDQYFFINRRLIQNRMLVQAVQQAYGELLEERQSPFALLFLGLDPSLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-NAPKTHLPKY 358 HPAK +RF + IR+ + +++A+ S+ + + + + + P+ K Sbjct: 299 HPAKLEVRFEDEKSIRSMVYPVVKRAVRTADFSSEASFAAPSAPTVSGEVDLPEVSSRKL 358 Query: 359 ATSL------------TNTQEKLFLQENRLS---TNDLLPSDDPTYSEDNDPVEE----- 398 + S N + F + +S + L + S V+E Sbjct: 359 SYSSFSGKASTTGDLYRNYRAGAFSAPSSVSPMLFDSSLETSLSAGSRPTPMVQESLLTP 418 Query: 399 ----------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + Q+H YII Q GL+I+DQH AHER+++E+ N Sbjct: 419 SVDQPDTGDGENPVAPEKEPKIWQLHNKYIICQIKTGLMIIDQHVAHERVLYERAIDIMN 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 SQ LL P+ IDL + + E ++L+RLG FG ++ I +P + Sbjct: 479 EAAPNSQQLLFPQKIDLKPWQYEVFEEISDELYRLGFNIRPFGGMSVMIEGVPPDVRDGA 538 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 +L+D+I E +++ L+ R +N+ + +C +I +G+K+ EM L+ + Sbjct: 539 EATILQDMIAEYQENAAKLKLEKR-DNLAKSYSCRNAIMTGQKLSVEEMRMLIDRLFATR 597 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP I+L L +++++FGR Sbjct: 598 MPYVCPHGRPVIIRLSLGELDRMFGR 623 >gi|229012952|ref|ZP_04170117.1| DNA mismatch repair protein mutL [Bacillus mycoides DSM 2048] gi|228748206|gb|EEL98066.1| DNA mismatch repair protein mutL [Bacillus mycoides DSM 2048] Length = 647 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 185/648 (28%), Positives = 303/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLSIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + + + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFKFEHTKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHLPKYATSLTNTQEKLFL 371 Q+ P L + S + + + Sbjct: 359 RESSMPNIVLPTGMDEKQEETTTVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSSKPVIE 418 Query: 372 QENR-----LSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGL 426 Q R S +D ++ E Q+H YI +Q +GL Sbjct: 419 QTVREEKEWTSNDDDFELEELEEEVGEIEEIEMNGNDLPPLYPIGQMHGTYIFAQNDNGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|315640094|ref|ZP_07895217.1| DNA mismatch repair protein HexB [Enterococcus italicus DSM 15952] gi|315484141|gb|EFU74614.1| DNA mismatch repair protein HexB [Enterococcus italicus DSM 15952] Length = 656 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 178/649 (27%), Positives = 303/649 (46%), Gaps = 59/649 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ ++ G Q+ DNG Sbjct: 1 MKIKELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDILLEDAGLKKIQVVDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ A +RH TSKI D I T GFRGEALPSI +VS +T+ + G Sbjct: 61 EGIADEDVENAFKRHATSKIHHQADLFRIRTLGFRGEALPSIASVSEMTIETASQGATNG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + + G I S + + GT + V +LFF PARL ++K+ Q E I D++ R+A++ Sbjct: 121 SIVHLQGGTILSHKMGPLRKGTKIVVENLFFNTPARLKYVKTFQTELANIGDIVNRLALS 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P V+F + KM + NG+ + I+ + G + + + ++GY Sbjct: 181 HPSVAFRLVHDGN---KMTQTAGNGDLKQTIAGIYGLQTAKKMLVIAADDLDFQIKGYIS 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +P R N N + INGR +++ + I Y + +GR+P+ ++ + +DP VDVN Sbjct: 238 LPEVTRANRNYLSLIINGRFIKNYALNKAIIQGYGSKLMVGRFPIAIIEITMDPLLVDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ-DNAPKTHLP- 356 VHP K +R T + + +I +A+ + + + K+ F + +T LP Sbjct: 298 VHPTKQEVRLSKETELTQLLKSAIVEALKEPSLIPNVGQQKEFKQRFQEKQTMEQTSLPL 357 Query: 357 ---------------------------------KYATSLTNTQEKLFLQENRLSTNDLLP 383 + TQ+ L + ST + Sbjct: 358 TQANDKPLVYDAASGDFFVPGDTQKLEKVPPTDSVEPTYEATQQPLDTAAQQTSTENRTT 417 Query: 384 SDDPTYS------------------EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG 425 + E+ + Q+H ++ +Q DG Sbjct: 418 IPKIAEELARFDETVHDTTAISVQMVEKMLHEKPSTQRFPELEYFGQMHGTFLFAQGEDG 477 Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L I+DQHAA ER+ +E R+ Q L+ P +++ + I+E + L ++G+ Sbjct: 478 LYIIDQHAAQERIKYEYYREQIGEVSRDLQELIIPIVLEYPADDYLRIIEGKDTLEQVGL 537 Query: 486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 E FG + IR P Q+ +D+ID + + +++ +E M+C S Sbjct: 538 FLEDFGQYTLIIRAHPTWFPAGQEEQVAKDLIDMYLATGKV-SVKSFLEATAIMMSCKRS 596 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 I++ + + LL+E+ N C HGRP + LSD+E++F R Sbjct: 597 IKANHYLDDKQARALLKELTTCENPFNCPHGRPVLVHFTLSDMERMFKR 645 >gi|197117368|ref|YP_002137795.1| DNA mismatch repair protein [Geobacter bemidjiensis Bem] gi|238690886|sp|B5EGD4|MUTL_GEOBB RecName: Full=DNA mismatch repair protein mutL gi|197086728|gb|ACH37999.1| DNA mismatch repair protein MutL [Geobacter bemidjiensis Bem] Length = 647 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 200/647 (30%), Positives = 330/647 (51%), Gaps = 58/647 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L E + N+IAAGE++ERP+ KEL+EN+LDA S V I GG+ +++D G Sbjct: 4 KIRILPENLTNKIAAGEVVERPASVAKELVENALDAGSKEVVVEIESGGRRLIKVSDTGC 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ ++ +A++RH TSKI+ +D ++ T GFRGEALPS+ +VS LT+ +R + G Sbjct: 64 GMSRDDALLALERHATSKIATDEDLFSLCTLGFRGEALPSVASVSRLTISTRTSDSVEGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I G +I V+ M GT++ VR+LFF PARL F+KS + E + +++ R+AI+ Sbjct: 124 EIYAEGGRIKEVKECGMAVGTVISVRNLFFNTPARLKFMKSAETEGGHVGELLTRLAISR 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V FT+ + F++ + + ER++ ++G + ++ + + + G Sbjct: 184 PEVRFTYKNDGK----VVFRALDADLKERVATMLGRSIASFLYPVSYQEGGLKVSGLVAA 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R + Y +INGR ++DK + I AY + GRYPVV + +EI P +VDVNV Sbjct: 240 PECSRSAGSHLYTYINGRFIKDKVVQHAILQAYRNFLERGRYPVVAVFIEIAPGEVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQ------KAINKKGISTSSVLSKKMISSFH------Q 347 HP K +RFR + + I +++ + + ++ S ++K ++ Q Sbjct: 300 HPTKHEVRFREQGRVHDAIQNAVESVLKETPWLKRPAVAAVSRPTEKDAAAARAVLEGSQ 359 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 P T P+ A + Q + S ++ ++ D P + G Sbjct: 360 APLPVTPQPRPALTSEKPVPAPQAQPQQSSISEARVAEVRELLVDFQPRPQPSLRPQYQG 419 Query: 408 I----------------------------------------ACAQIHQNYIISQTTDGLV 427 Q + +YI+ Q LV Sbjct: 420 SVTSKEALPYAPMAAPVPVREPETAAPEPDPAAAGYFSSLGVIGQFNASYILCQRGTDLV 479 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 ++DQHAAHER+ FEK++ F ++ SQ LL PE ++ E A++ EH +L RLG + Sbjct: 480 LIDQHAAHERVAFEKLKGQFAGREVDSQGLLFPETMEFSFRESAVLREHLAELARLGFEF 539 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR 547 E FG N ++ +P +LS +RDI++E+ S + D E++LA +AC+ +R Sbjct: 540 EEFGGNTWLLKGVPQVLSATRYVDTIRDILEELGSLSRSRAFSDIQEDLLARIACHSVVR 599 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R + +E+ L ++M++ SS C HGRP L L+++EK+F R Sbjct: 600 GKRTLSQVEITALFKQMDETDFSSNCPHGRPVMQTLTLAEVEKMFKR 646 >gi|23099087|ref|NP_692553.1| DNA mismatch repair protein [Oceanobacillus iheyensis HTE831] gi|22777315|dbj|BAC13588.1| DNA mismatch repair protein [Oceanobacillus iheyensis HTE831] Length = 630 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 187/633 (29%), Positives = 297/633 (46%), Gaps = 44/633 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I ++ + + N+IAAGE++ERP+ +KEL+ENS+DA ++ + I G +ITDNG Sbjct: 1 MPIIQMPDALANKIAAGEVVERPASVVKELLENSIDAGATWIRVEIKEAGLEEIRITDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM +++ A RH TSKI D ++ T GFRGEAL SI +VS L+ + + G Sbjct: 61 AGMEEDDVERAFLRHATSKIKNESDLFHVKTLGFRGEALASIASVSKLSAQT-SQGDQAG 119 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + G + GT + V +LF+ PARL ++KS E I+DV+ RMA+A Sbjct: 120 TLLQLEGGSVKHRGKSDARQGTDITVSELFYNTPARLKYMKSLHTELGHISDVLNRMALA 179 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P+V K N NG+ + ISQV G + ++ K+ + + GY Sbjct: 180 HPEVRIEALHNDKGLIKTN---GNGDILQVISQVYGMSVAKQMLPVDVKTLDYRVHGYIA 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P R + N INGR +++ + I Y +P+GR P+VVL +E+DP VDVN Sbjct: 237 KPEVTRASRNYMSTIINGRFIRNIGLNKAILQGYHTLLPIGRSPIVVLNIEMDPILVDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-----SSVLSKKMISSFHQDNAPKT 353 VHPAK +RF + I I+ + + K SSF D+ + Sbjct: 297 VHPAKLEVRFSKDKELFTSIESMIRDRFREITLIPKVEKQPVQRQKSEQSSFRFDSNNRE 356 Query: 354 HLP-------KYATSLTNTQEKLFLQENR-------------------------LSTNDL 381 P + + + EK L E R +S + Sbjct: 357 KQPINSDFSQDSRSIIRDQTEKFDLPETRDKMINREIEQHANLVDNDESEVTEKVSVDMS 416 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 S + ++ + + + + Q+ YI++Q +GL +VDQHAA ER+ +E Sbjct: 417 TSSFEAAHAPNREEQTNTIDKRVPMMYPIGQLQGTYILAQNENGLFMVDQHAAQERVKYE 476 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 R SQ LL P D + E I H EDL ++G+ E FG IR P Sbjct: 477 FFRNKLGKPMNESQELLIPMTFDFAKQESLFIENHKEDLEQVGLFFEAFGNQTYVIRSHP 536 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 K +++R+++D++++ S +++ E M+C SI++ + S EM +LL Sbjct: 537 TWFPKGFEEEVIREMVDQVMNESKI-SVEGIREEAAILMSCKRSIKANHYLTSDEMYQLL 595 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + C HGRP + ++EK+F R Sbjct: 596 EDLRNTTDPFTCPHGRPIIVHFSTYELEKMFKR 628 >gi|229134576|ref|ZP_04263386.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST196] gi|228648837|gb|EEL04862.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST196] Length = 647 Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 184/648 (28%), Positives = 303/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLSIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + + + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFKFEHTKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHLPKYATSLTNTQEKLFL 371 Q+ P L + S + + + Sbjct: 359 RESSMPNIVLPTGMDEKQEETTTVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSSKPVIE 418 Query: 372 QENR-----LSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGL 426 + R S +D ++ E Q+H YI +Q +GL Sbjct: 419 ETVREEKEWTSNDDDFELEELEEEVGEIEEIEMNGNDLPPLYPIGQMHGTYIFAQNDNGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVTQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|193213544|ref|YP_001999497.1| DNA mismatch repair protein MutL [Chlorobaculum parvum NCIB 8327] gi|238692607|sp|B3QL59|MUTL_CHLP8 RecName: Full=DNA mismatch repair protein mutL gi|193087021|gb|ACF12297.1| DNA mismatch repair protein MutL [Chlorobaculum parvum NCIB 8327] Length = 626 Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 184/630 (29%), Positives = 309/630 (49%), Gaps = 41/630 (6%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I KL + + N+I+AGE+++RP+ +KEL+ENS+D+ +S + VI G+ +I DN Sbjct: 1 MPSIAKLPDIVANKISAGEVVQRPASVVKELLENSIDSGASAITVVIKEAGRQLVRIIDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM S++ ++V+R TSKISD D + + T GFRGEAL SI +VSH L +R Sbjct: 61 GCGMDSDDALLSVERFATSKISDVDDLNALRTLGFRGEALASISSVSHFELKTRRQSEPV 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G Q+ +G +I +P PGT + VR+LFF +PAR FLKS E I + ++ + Sbjct: 121 GIQLISNGGEIEGPQPAQCEPGTSISVRNLFFNVPARRKFLKSNATEFKHIHETVKAFVL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 AYP++ + + + ER+S GE F + +E+ E+++ +T+ GY Sbjct: 181 AYPEIEWRLINDDHELFYFRTP----DVRERLSHFYGEGFGESLIEVTEENDYMTIGGYL 236 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P Y +IN R +Q++ ++ ++ AYAE + + P +L L +DP VDV Sbjct: 237 GKPGMMVRQKYDQYFYINRRLIQNRMLVQAVQQAYAELLEERQSPFALLFLGLDPSLVDV 296 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS-------------- 343 NVHPAK ++F + IR+ + +++A+ S + ++ Sbjct: 297 NVHPAKLEVKFEDEKSIRSMVYPVVKRAVRTADFSPEATVAPSPAPVGSHGIGLPESSSR 356 Query: 344 -------------------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 ++ Q + S+ + + + S Sbjct: 357 KLAYSDFSGKSSTTGDLYRNYRQGAFDLSGASVPPPSIDPVESSFGSGSGEPYPSMVQES 416 Query: 385 DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 ++ +E Q+H YII Q GL+I+DQH AHER+++E+ Sbjct: 417 LLTPSADQPSAADEQNPVAPDKEPKIWQLHNKYIICQIKTGLMIIDQHVAHERVLYERAI 476 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 N SQ LL P+ IDL + + E E+L+RLG FG ++ I +P + Sbjct: 477 DVMNEAVPNSQQLLFPQKIDLKPWQYEVYEEISEELYRLGFTIRPFGGLSVMIEGVPPDV 536 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 N +L+D+I E ++++ L+ R +N+ + +C +I +G+K+ +M L+ + Sbjct: 537 RDGNEATILQDMIAEYQENASKLKLEKR-DNLAKSYSCRNAIMTGQKLDVEQMRMLIDRL 595 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP I+L L +++++FGR Sbjct: 596 FATRMPYVCPHGRPVIIRLSLGELDRMFGR 625 >gi|294500853|ref|YP_003564553.1| DNA mismatch repair protein MutL [Bacillus megaterium QM B1551] gi|294350790|gb|ADE71119.1| DNA mismatch repair protein MutL [Bacillus megaterium QM B1551] Length = 625 Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 173/626 (27%), Positives = 295/626 (47%), Gaps = 38/626 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS+++ N+IAAGE++ERP+ +KEL+EN++DA S+ +E + G S +I DNG Sbjct: 3 KIVQLSDELSNKIAAGEVVERPASVVKELVENAIDANSTVIEIELEEAGLSKIRILDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ SE+ A +RH TSKI D I T GFRGEALPSI +VS L L + G Sbjct: 63 GIASEDCLTAFKRHATSKIKTEQDLFRIRTLGFRGEALPSIASVSMLELKTST-GEEAGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G +I + GT + + +LFF PARL ++K+ E +TDV+ R+A+++ Sbjct: 122 HLKLRGGEIVHHELTSSRKGTELVIENLFFNTPARLKYMKTVNTELGNVTDVVNRLAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS ++ + + +G+ + ++ + G + +N +S + + GY + Sbjct: 182 PEVSIRLMHQGR---QLLYTNGSGDVRQVLAAIYGMAVARKMIPINVQSLDYEVSGYVAL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR V++ +L ++ Y +P+GR+P+V L + +DP VDVNV Sbjct: 239 PEITRASRNYMSTIINGRFVKNYGLLKAVQQGYHTLLPIGRFPIVFLTITMDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +R + I Q ++ A K+ + +V+ K S+ + Sbjct: 299 HPAKLEVRLSKEAELFELIEQGVKAAFKKQQLIPDAVVPTKSKSAVQPTEQQTFTFDHRS 358 Query: 360 TSLTNTQEKLFLQEN-------------------------------RLSTNDLLPSDDPT 388 + + + + + ++ Sbjct: 359 KPSGYQPSDMVREPSLKEAPARVDEIMPPVKKEVIRQDEELEPTFREIEHYEESVEENAP 418 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 E + +E Q+H YI++Q GL I+DQHAA ER+ +E ++ Sbjct: 419 IPEPSHSAKERPEPRVPAMYPIGQMHGTYILAQNEKGLFIIDQHAAQERIKYEYFKRKLG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 Q LL P ++ E ++ E+ + L +G+ E FG N+ +R P K Sbjct: 479 EVDSEVQELLMPLTLEFSGNEALILEEYKDMLAEVGVFLEPFGQNSYIVRSHPQWFPKGE 538 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 + + ++I +I ++ E M+C GSI++ +++ E+ LL + K Sbjct: 539 EQETIEEMIQQIFTMKRV-NIEKLREEAAIMMSCKGSIKANHHLRNDEIFALLETLRKTT 597 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP I ++EK+F R Sbjct: 598 DPFTCPHGRPIIIHHSTYEMEKMFKR 623 >gi|229086317|ref|ZP_04218495.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-44] gi|228697012|gb|EEL49819.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-44] Length = 645 Score = 513 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 185/647 (28%), Positives = 304/647 (46%), Gaps = 60/647 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLVIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + + + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDFTIRGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNYVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM-------ISSFHQDNAPK 352 HPAK +RF + I +++Q A K + + ++ K FH ++ Sbjct: 299 HPAKLEVRFSKEQELLQLIEKTLQDAFKKIQLIPDAGVTTKKKEKDESVQEQFHFEHTKP 358 Query: 353 THLPKY----ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY---- 404 P T + QE++ +++ + L + V E E+ Sbjct: 359 KESPMPNIVLPTGMDEKQEEVSIRK-QTPAPQLWQQPKQEWQPPQSLVREEESWQPSSKP 417 Query: 405 -------------------------------------QLGIACAQIHQNYIISQTTDGLV 427 Q+H YI +Q GL Sbjct: 418 IIEKSVQEAKEWDSSDEDFELEEIEEIQEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGLY 477 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 478 MIDQHAAQERINYEYFRDKVGQVTQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLFL 537 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR 547 E+FG + +R P K +++ +++ +++ ++ E M+C SI+ Sbjct: 538 EQFGHQSFIVRSHPTWFPKGKETEIIDEMMQQVVKLKKVD-IKKLREEAAIMMSCKASIK 596 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + + + ++ LL ++ N C HGRP + ++EK+F R Sbjct: 597 ANQYLTNDQIFALLEKLRTTTNPYTCPHGRPILVHHSTYELEKMFKR 643 >gi|218904896|ref|YP_002452730.1| DNA mismatch repair protein MutL [Bacillus cereus AH820] gi|226723026|sp|B7JJ46|MUTL_BACC0 RecName: Full=DNA mismatch repair protein mutL gi|218536438|gb|ACK88836.1| DNA mismatch repair protein MutL [Bacillus cereus AH820] Length = 647 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 188/648 (29%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T+QGY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIQGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S E Sbjct: 359 KEPSMPEIVLPTGMDEKQEEPQAVKQPTQLWQPPKQEWQPPQSLVREEQSWQPSTKPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIQEEKSWDSNEEGFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|229098237|ref|ZP_04229184.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-29] gi|229117254|ref|ZP_04246632.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-3] gi|228666154|gb|EEL21618.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-3] gi|228685135|gb|EEL39066.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-29] Length = 647 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 183/648 (28%), Positives = 301/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + + + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ ++ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAVQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-------------------------- 333 HPAK +RF + I +++Q A K + Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHTKP 358 Query: 334 --------------------------SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQE 367 + L + + + + S E Sbjct: 359 KEPQMPNIVLPTDMDEKQEERTTVKQPAQLWQPAKREWQPPQSLVREEQSWQPSSKPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E ++ND + E + E E Q+H YI +Q +GL Sbjct: 419 EPIREEKSWNSNDDDFELEELEEEVGEIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDNGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|332982486|ref|YP_004463927.1| DNA mismatch repair protein MutL [Mahella australiensis 50-1 BON] gi|332700164|gb|AEE97105.1| DNA mismatch repair protein MutL [Mahella australiensis 50-1 BON] Length = 579 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 171/591 (28%), Positives = 294/591 (49%), Gaps = 17/591 (2%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTS 65 L + ++IAAGE++ERP+ +KEL+ENS+DA ++ + I GG + ++TDNG GM Sbjct: 2 LDQDTRSKIAAGEVVERPASVVKELVENSIDAAATAITVEIENGGMTLIRVTDNGEGMER 61 Query: 66 EEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAI 123 E+ +A +RH TSKI +DD I T GFRGEAL SI AVS + + + ++ G + I Sbjct: 62 EDAVLAFERHATSKIARADDLEAIFTLGFRGEALASIAAVSKVRMETVRQGSSEGTFVEI 121 Query: 124 SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 G K+ S + GT V V DLF+ PARL ++KS + E + I D+I R + YP +S Sbjct: 122 EGGKLISQGVIGRPGGTSVTVSDLFYNTPARLKYVKSPKTEASRIKDIIDRFVLGYPHLS 181 Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFN 243 F + ++ ++ + G+ E I+ V G + + + + I + GY G P Sbjct: 182 FRYLSVGK---QVLYSPGTGHLDEAIAAVYGHETAKKMISVQYEWEGIEINGYIGSPDTA 238 Query: 244 RGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAK 303 R N F+NGR ++ + + A++ I + R+P+ V+ + +DP VDVNVHPAK Sbjct: 239 RANRAFQTFFVNGRYIRSPLLSRALEEAFSTLIMVNRFPMCVINITLDPHDVDVNVHPAK 298 Query: 304 SYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLT 363 + +RF + + +I++A++ G+S+ +I +D Sbjct: 299 TEVRFTDDRRVAAVFFHAIKRALSGDGMSSEQDQDNGIIEPVREDGQQ-----------A 347 Query: 364 NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTT 423 T+ L Q ++ ++ + ++ A + Y++ + T Sbjct: 348 QTERNLDRQPVLPWVDNGRSYHQQNFASIDKVNDDRGAYEAPSMRVIGVLFSTYLLIEKT 407 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 D L I+DQHAAHER+++E+ + Q L++P ++D+ E L+ ++ E L + Sbjct: 408 DQLYIIDQHAAHERILYEQYMSMLQKQHLELQYLVSPLVLDITPQERQLLEDNMELLRSM 467 Query: 484 GIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY 543 G + E F + +R +P + + LL+DIID + R E ++ MAC Sbjct: 468 GFEIEEFDSDTYVLRAVPVLFGRPRAEGLLKDIIDGMRLFDAHSPYDYRREEVM-MMACR 526 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++++ + ++ RL E+ C HGRP + ++EK+F R Sbjct: 527 SAVKAHDHLDQSQIIRLAGEILSGNVPPTCPHGRPIVRSISKYELEKMFKR 577 >gi|228992456|ref|ZP_04152384.1| DNA mismatch repair protein mutL [Bacillus pseudomycoides DSM 12442] gi|228767277|gb|EEM15912.1| DNA mismatch repair protein mutL [Bacillus pseudomycoides DSM 12442] Length = 643 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 183/644 (28%), Positives = 293/644 (45%), Gaps = 56/644 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELVTSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIMQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + + + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEVESLDFTIRGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ + +E+DP VDVNV Sbjct: 239 PEVTRASRNYISTIVNGRYVRNYVLMKAIQQGYHTLLPVGRYPIGFVSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS------------------------- 334 HPAK +RF + I +++Q A K + Sbjct: 299 HPAKLEVRFSKEQELLQLIEKTLQDAFKKIQLIPDAGVTSKKKEKDESVQEQFHFEHTKP 358 Query: 335 ----------SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 + K L + E L +EN + + Sbjct: 359 KEVPLPNIVLPTGMDEKQEEIQAKPQNKNLLWQPPKQEWQPPESLVKEENGWQLSKSMIG 418 Query: 385 DDPTYSEDNDPVEES--------------EATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 D EE Q+H YI +Q GL ++D Sbjct: 419 KSVQDGNGWDNSEEDFELEEVAEIQEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGLYMID 478 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAA ER+ +E R Q LL P IDL E + E E+L ++G+ E+F Sbjct: 479 QHAAQERINYEYFRDKVGQVTKEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLFLEQF 538 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 G + +R P K +++ +++ +++ ++ E M+C SI++ + Sbjct: 539 GHQSFIVRSHPTWFPKGQEIEIIDEMMQQVVKLKKVD-IKKLREEAAIMMSCKASIKANQ 597 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 YLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 641 >gi|323705359|ref|ZP_08116934.1| DNA mismatch repair protein MutL [Thermoanaerobacterium xylanolyticum LX-11] gi|323535261|gb|EGB25037.1| DNA mismatch repair protein MutL [Thermoanaerobacterium xylanolyticum LX-11] Length = 609 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 189/611 (30%), Positives = 315/611 (51%), Gaps = 24/611 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L +++IN+I+AGE++ERP +KEL+ENS+DA+S + I GG + ++ D+G Sbjct: 3 KINLLDDELINKISAGEVVERPMSIVKELVENSIDADSKNITIEIIDGGIPYIKVLDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + +A RH TSKI +DD NI T GFRGEAL SI A+S + L ++ + G Sbjct: 63 GMNEIDAVLAFGRHATSKIKSTDDLFNIGTLGFRGEALASIAAISKVLLKTKEENSLYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + G KI G VEV+D+F+ PAR FLK E ITD++ ++A++ Sbjct: 123 LINVEGGKILKKVKCGCEKGCSVEVKDVFYNTPARRKFLKRPSTEAMYITDMVAKIALSR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF + K + S N + E I ++ G++ +N +E + ++ + Sbjct: 183 PDISFRYIKDKRMEFM---TSGNNSVNEVILRLYGDELYSNLIETEYNDEYMNIKIFLCK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P++ RGN N +F+NGR V++K + + AY IP+ RYPVV+ L IDP+ +DVNV Sbjct: 240 PSYTRGNRNMQILFVNGRFVKNKIYTTAVEEAYKTLIPVNRYPVVITYLNIDPKNIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K ++F + I + I +SI+ A+N+ + + + ++ + PK Sbjct: 300 HPTKLEVKFSDEKEIFDSIYKSIKNALNRSNLIPTIRHDMFTYADITENKVEEKSNPKQL 359 Query: 360 TSLTNTQEKLFLQ---------ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG--- 407 + L+ N +++ D + N +E + ++ Sbjct: 360 NMIEEESTNKILEVYPNNKSFVSNVKESSEKAYFDYNDVNAFNKEIENTHIENFNTLPDE 419 Query: 408 ----IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 I YII + D + +VDQHAAHER+++EK +N+ + + P +I Sbjct: 420 RDDYKIVGVIFSTYIIVEKDDVIYLVDQHAAHERILYEKFMNMYNN--VQGKQTTIPILI 477 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 ++ G+ +I E+ E ++LG K E FG N+I +RE+P +L + QL DIID++ Sbjct: 478 NIEPGDDVIINENIELFNKLGYKFESFGNNSIVLREVPVVLGQPESRQLFIDIIDKLKRD 537 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + + E + MAC ++++ + E+N L +++ N C HGRP + + Sbjct: 538 DFNKDINLK-EETIIMMACKKAVKAMDSLSKEEINSLFNDLKVTENPYTCPHGRPVIVSI 596 Query: 584 KLSDIEKLFGR 594 K ++EK+F R Sbjct: 597 KKYELEKMFKR 607 >gi|188583966|ref|YP_001927411.1| DNA mismatch repair protein MutL [Methylobacterium populi BJ001] gi|179347464|gb|ACB82876.1| DNA mismatch repair protein MutL [Methylobacterium populi BJ001] Length = 671 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 233/656 (35%), Positives = 363/656 (55%), Gaps = 66/656 (10%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R+L ++++IAAGE++ERP+ A+KEL+EN++DA + +E I GGG+ ++ D+G GM Sbjct: 16 RRLDPILVDRIAAGEVVERPASAVKELVENAIDAGARSIEVAIEGGGRRLIRVIDDGIGM 75 Query: 64 TSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 +E++ +AV+RH TSK+ D D + I + GFRGEALPSIGAVS LT+ SR G + Sbjct: 76 GAEDLALAVERHATSKLPDGDLTRIGSLGFRGEALPSIGAVSRLTITSRTADGE-GLSLT 134 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 I VRP GT +EV +LF PARL FLKS++ ET +++++RR+A+A P++ Sbjct: 135 IDSGAKGPVRPAPATRGTRIEVTELFAATPARLKFLKSDRAETAAVSEILRRLAVAQPQI 194 Query: 183 SFTFSTIKSNRYKMNF--QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 FT T + + R+ V+G DF NAV ++ L G+ G+P Sbjct: 195 RFTLRTESGSPTVFPAESEPGPAALLRRLGAVLGPDFPGNAVPVDMAREGFALAGHVGLP 254 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TF+RG AN + +NGR V+D+ +L +R AYA+T+ R+PV+ L L DP VDVNVH Sbjct: 255 TFHRGAANHIHFVVNGRPVRDRLLLGAVRGAYADTMSSDRHPVLALHLTCDPALVDVNVH 314 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD------------ 348 PAK+ +RFR P ++R I+ +I +A+ + G +SS ++ + + Sbjct: 315 PAKTELRFREPGLVRALIVSAIHEALRRAGARSSSTGTQAALDALRAGGSLASGSLGGGG 374 Query: 349 ------------NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND-- 394 A T + + +LF + + P ++ + Sbjct: 375 LGGVPAMRSGGGFAVHTGASAASPLTPRSAARLFSGPSVAAPAGYRAPQHPAFATERPGF 434 Query: 395 --------------------------PVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 E+ + LG A AQIH+ YI++QT DG+V+ Sbjct: 435 AETPQALFAADLAPPGADLRPEPEAVFEAETPPDSHPLGAARAQIHETYILAQTRDGIVL 494 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 VDQHAAHERL++E+++++ + Q LL P+++++ E ++E +L RLG+ E Sbjct: 495 VDQHAAHERLVYERLKRERAGGGVARQGLLIPDVVEMAPEEADRLVEAAPELERLGLSLE 554 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS----------STTYTLQDRIENILA 538 FGP A+ +R +PA L+ ++ L+ D++D + S + R++ +L+ Sbjct: 555 AFGPGAVLVRAVPAALAGGSVRNLVLDVLDALQASGVEEGGPAGEGDPDPVSRRLDALLS 614 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C+GSIR+GR+++ EMN LLREME P S CNHGRPTF+ L L+DIE+LFGR Sbjct: 615 RMSCHGSIRAGRRLKPEEMNALLREMEATPLSGSCNHGRPTFVTLGLADIERLFGR 670 >gi|269925916|ref|YP_003322539.1| DNA mismatch repair protein MutL [Thermobaculum terrenum ATCC BAA-798] gi|269789576|gb|ACZ41717.1| DNA mismatch repair protein MutL [Thermobaculum terrenum ATCC BAA-798] Length = 586 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 189/595 (31%), Positives = 331/595 (55%), Gaps = 18/595 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L ++ I Q+AAGE++ERP+ +KELI+NS+DA +++++ + GG ++ DNG G Sbjct: 5 IKPLDQETIRQLAAGEVVERPASVVKELIDNSIDASATKIQIYVENGGLDLIRVVDNGTG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ + VQ+H TSKIS +D I+T GFRGEAL +I +VS L + S+ + GA+ Sbjct: 65 IPRKDLELCVQKHATSKISSPEDLYKINTLGFRGEALYAIASVSRLRIRSKHGDSP-GAE 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + +R V M GT VEVR+LF+ +PARL F+ E + IT +++ A+ +P Sbjct: 124 LECLSPGNTRIRTVGMPQGTQVEVRNLFYNVPARLKFIGGPTSEASRITSTVKQYALGHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F + + GN + I V G ++ + + + +EI ++GY +P Sbjct: 184 NIAFELQIDGKKQLETF---GKGNILDCIGSVFGLQIRDHMIPVAYEEDEIEIKGYVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + NR N + +VF+NGR V K ++ I+ +Y+ + +GR+P+V++ L I P VDVNVH Sbjct: 241 SINRSNRSDIHVFVNGRPVSAKQLMFAIQESYSSLLMVGRFPIVIINLLIPPEFVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ +RF + + + + ++I+ A+ + S + L QD+ P+ L A Sbjct: 301 PTKAEVRFADDRRVASVVGRTIRTALQEAFSSRDAEL--------PQDDQPQGKLRPLAF 352 Query: 361 SLTNTQ-EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 S + + ST + + + EE QI YII Sbjct: 353 SFNSASISEKHAWHVTTSTQTHQHIESTSTEATSSLEEERTLPKLPPLRVLGQIALTYII 412 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ +G+ ++DQHAAHER++ E+++++ + K+ SQ LL P II L + + + ++ Sbjct: 413 AEGPNGMYLIDQHAAHERILLERIQKELETDKVASQMLLDPLIITLGDHQATFMKNLVDE 472 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L+RLG +AE FG I +R IPAIL K+ + + D+ +I + S ++ R + + Sbjct: 473 LNRLGFEAESFGVKEIIVRSIPAILPKEEVMAFIEDLCQDINNFSN---VELRRNAVAVS 529 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC +I++G+++ EM L+ ++E+ + C HGRPT ++L S +E+ FGR Sbjct: 530 LACRSAIKAGQQLSMQEMRSLIEQLEQTNFPTACAHGRPTILELTKSQLEREFGR 584 >gi|148658624|ref|YP_001278829.1| DNA mismatch repair protein MutL [Roseiflexus sp. RS-1] gi|148570734|gb|ABQ92879.1| DNA mismatch repair protein MutL [Roseiflexus sp. RS-1] Length = 605 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 182/608 (29%), Positives = 311/608 (51%), Gaps = 19/608 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L + QIAAGE+IERP+ ++EL+EN+LDA + R+ GGG ++ D+G Sbjct: 1 MPIRVLDATVAAQIAAGEVIERPASVVRELVENALDAGARRIAVEARGGGLREIRVQDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++E+ +A RH TSK+S DD +I T GFRGEALPSI AV+ + ++R + G Sbjct: 61 CGIPADEVELAFARHATSKLSTADDLWSISTLGFRGEALPSIAAVAQVICITRAAGADVG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ I+G ++ ++ P +PGT + VR+LF+ P R FL+S+ E+ IT V+ + A+A Sbjct: 121 VELRIAGGEVQAIMPRGCSPGTTISVRNLFYNTPVRREFLRSDATESAAITAVVTQYALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS----NEITLQ 234 YP+V F+ + S NG+ +V G D + + + + + Sbjct: 181 YPEVRFSLAIDGRATLH---TSGNGDLRAAAIEVYGLDVARQLLPVEASTGEGVEYVQVS 237 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTI-RTAYAETIPLGRYPVVVLLLEIDPR 293 G P R + ++F+N R +Q + ++ + AY + GR+PV +L + + P Sbjct: 238 GLVSPPGLTRSSRAAIHLFVNRRAIQPRGQIAMVLEEAYHTLLMKGRHPVAILNISVHPA 297 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI-------SSFH 346 VDVNVHP KS ++FR+ T + + + ++++ A+ + G+ Sbjct: 298 AVDVNVHPTKSEVKFRDTTRVMSTLGRAVRSALLESGVRPWDDPGVPATLETAQRRFELR 357 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 + + +T + T+D + DP+ + A+ Sbjct: 358 RLGTSHESGWEAFPHMTAGDSPAAPTQVNAWTDDGHSAWQREPVTSPDPLPPTRASRLPP 417 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 QI Q+YI++++ DG+ ++DQHAAHER+ +E++ + + SQ LL P+++DL Sbjct: 418 LRIIGQIAQSYIVAESADGMYLIDQHAAHERITYERLMAQRGAGAVESQELLMPQVVDLP 477 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 L++ L G E FG ++ +R IPA+L ++ L +I D + Sbjct: 478 PTAHDLLLAAANRLAEWGFVVEPFG-RSLRVRAIPAVLYPGDLTTALLEIADHLSGRGGA 536 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 D E +L T++C+ S+R+G+ + EM L+ ++E+ + C HGRPT I L + Sbjct: 537 TP-HDWREAMLITLSCHTSVRAGQTLSFDEMRGLVMQLEQCESPRTCPHGRPTMILLTTT 595 Query: 587 DIEKLFGR 594 IE+ FGR Sbjct: 596 QIERQFGR 603 >gi|228954045|ref|ZP_04116074.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229071265|ref|ZP_04204489.1| DNA mismatch repair protein mutL [Bacillus cereus F65185] gi|229081020|ref|ZP_04213533.1| DNA mismatch repair protein mutL [Bacillus cereus Rock4-2] gi|228702334|gb|EEL54807.1| DNA mismatch repair protein mutL [Bacillus cereus Rock4-2] gi|228711886|gb|EEL63837.1| DNA mismatch repair protein mutL [Bacillus cereus F65185] gi|228805611|gb|EEM52201.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 647 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S E Sbjct: 359 KEPSMPDIVLPTGMDAKQEEPQAVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIQEEKSWDSNEEDFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|229174433|ref|ZP_04301965.1| DNA mismatch repair protein mutL [Bacillus cereus MM3] gi|228608993|gb|EEK66283.1| DNA mismatch repair protein mutL [Bacillus cereus MM3] Length = 647 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 185/648 (28%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLMIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM---------ISSFHQDNA 350 HPAK +RF + I +++Q A K + + ++ K F Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQSAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 351 PKTHLP----------KYATSLTNTQEKLFLQENRLSTN-------DLLPSDDPTYSEDN 393 + +P K L Q Q + + T Sbjct: 359 KEPSMPDIVLPTGMDEKREEPLAVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKPIME 418 Query: 394 DPVEESEAT---------------------------HYQLGIACAQIHQNYIISQTTDGL 426 +P+++ ++ Q+H YI +Q GL Sbjct: 419 EPIQKEKSWNSNDEDFELEELEEEVQEIEEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|167041133|gb|ABZ05893.1| putative DNA mismatch repair protein, C-terminal domain protein [uncultured marine microorganism HF4000_001A02] Length = 585 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 174/594 (29%), Positives = 310/594 (52%), Gaps = 13/594 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++LSE + N+I+AGE++ERP+ +KEL+EN +DA ++ + V+ GG+ Q+TDNG G Sbjct: 2 IKQLSEDLRNKISAGEVVERPASVVKELVENGIDAGATEITVVVEKGGQQLIQVTDNGSG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++++E+P+A + + TSKI DD NI T GFRGEAL SI +VS + ++S ++ G++ Sbjct: 62 ISAKELPIAFESYSTSKIGSVDDLFNIDTLGFRGEALASIASVSEVNVLS-ANESGDGSE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++I + +V+P GT + +R+LF+ PAR FLKS ++E + +++RR A++YP Sbjct: 121 MSILNGHLGAVQPAPAVQGTSITIRNLFYNTPARKKFLKSPRMEFRKVVEMVRRFALSYP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +F + + + RI V+ + + + ++ + T+ GY G Sbjct: 181 DRNFKLISDNRDILNLQS----EKLESRIVHVMDPAYRDQLLPVDFTKGDYTISGYLGNL 236 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + Y+F+N R +Q++ + S + AY I G YP L + + +VDVNVH Sbjct: 237 NLIRTRPGEQYIFLNERFIQNRLMNSGVYQAYKSIINRGEYPFFALNISVPHDEVDVNVH 296 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ +RF++ I + + +I++A++ + F D T Sbjct: 297 PMKTEVRFKDEWRIYHVLKSAIEEALSPILHTIPDFEK----PGFSSDFEFPTTFTPKEG 352 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 QE L L N D T Q+H YI+S Sbjct: 353 QANPDQEGLHLTHGDTGNNFQPALDRAKSYASQLATRPEPDTGRVDLEKIWQVHSKYIVS 412 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 T GLVI+DQH AHER+++E++ F++ + +QTLL PE+++ E + +++ L Sbjct: 413 PITSGLVIIDQHVAHERILYEEVMAAFDANPMAAQTLLFPEVMEFSPDEFSTLLDVLPYL 472 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 ++G + + FG N + I IP+ ++ N ++R+++D +D+ + E + A+ Sbjct: 473 EKMGFRMKEFGKNTVMIEAIPSEMAWGNEKTIIREMLDNYLDTQKKHA--SFQEALAASF 530 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC ++++G + EM L+ + + C HGRP I+L + ++++ F R Sbjct: 531 ACKAAVKAGDVLNGEEMRELVNRLFGTKHPYYCPHGRPIIIQLSMDELDRRFER 584 >gi|42782852|ref|NP_980099.1| DNA mismatch repair protein [Bacillus cereus ATCC 10987] gi|81830999|sp|Q732V8|MUTL_BACC1 RecName: Full=DNA mismatch repair protein mutL gi|42738779|gb|AAS42707.1| DNA mismatch repair protein MutL [Bacillus cereus ATCC 10987] Length = 647 Score = 511 bits (1317), Expect = e-142, Method: Composition-based stats. Identities = 188/648 (29%), Positives = 303/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFKFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S + E Sbjct: 359 KEPSMPEIILPTGMDEKQEEPLAVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKSIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +ND + E + E E Q+H YI +Q GL Sbjct: 419 EPIREEKSWDSNDEDFELEELEEEVQEIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|229180045|ref|ZP_04307389.1| DNA mismatch repair protein mutL [Bacillus cereus 172560W] gi|228603254|gb|EEK60731.1| DNA mismatch repair protein mutL [Bacillus cereus 172560W] Length = 647 Score = 511 bits (1317), Expect = e-142, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S E Sbjct: 359 KEPSMPDIVLPTGMDAKQEEPRAVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIQEEKSWDSNEEDFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|229186007|ref|ZP_04313177.1| DNA mismatch repair protein mutL [Bacillus cereus BGSC 6E1] gi|228597426|gb|EEK55076.1| DNA mismatch repair protein mutL [Bacillus cereus BGSC 6E1] Length = 647 Score = 511 bits (1317), Expect = e-142, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S E Sbjct: 359 KEPSMPEIVLPTGMDEKQEEPLAVKQPTQLWQPPKQEWQPPQSLVREEKSWQPSTKPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIQEEKSWDSNEEGFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|118478989|ref|YP_896140.1| DNA mismatch repair protein [Bacillus thuringiensis str. Al Hakam] gi|166231104|sp|A0RHE0|MUTL_BACAH RecName: Full=DNA mismatch repair protein mutL gi|118418214|gb|ABK86633.1| DNA mismatch repair protein MutL [Bacillus thuringiensis str. Al Hakam] Length = 647 Score = 511 bits (1317), Expect = e-142, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S E Sbjct: 359 KEPSMPEIVLPTGMDEKQEEPLAVKQPTQLWQPPKQEWQPPQSLVREEQSWQPSTKPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIQEEKSWDSNEEGFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|167037587|ref|YP_001665165.1| DNA mismatch repair protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116002|ref|YP_004186161.1| DNA mismatch repair protein MutL [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687658|sp|B0K9L6|MUTL_THEP3 RecName: Full=DNA mismatch repair protein mutL gi|166856421|gb|ABY94829.1| DNA mismatch repair protein MutL [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929093|gb|ADV79778.1| DNA mismatch repair protein MutL [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 614 Score = 511 bits (1317), Expect = e-142, Method: Composition-based stats. Identities = 195/616 (31%), Positives = 322/616 (52%), Gaps = 29/616 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L EK IN+I+AGE++ERP+ +KELIENS+DA S + I GG + +++D+G Sbjct: 3 KIHLLDEKTINKISAGEVVERPASIVKELIENSIDAGSKNITVEILEGGIPYIKVSDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + +A +RH TSKI D +I T GFRGEAL SI AVSH+TL ++ G Sbjct: 63 GMNEIDAILAFERHATSKIKSDNDLYSIGTLGFRGEALASIAAVSHVTLQTKEEGALFGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G K+ G +EVRD+FF PAR FLK E+ ITDV+ ++ +++ Sbjct: 123 KVVVEGGKVVEKTTCGCAKGCSIEVRDVFFNTPARRKFLKRPSTESMYITDVVTKLCLSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + ++ S NGN + I ++ G + ++ + + +S ++ L+ G Sbjct: 183 PEVSFKYVKDRKLQF---ITSGNGNIEDVILRLFGNEVYSSLMSASFESEDLKLKILAGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N N N + ++NGR V++K + + + A+ IP+ RYP V L +EIDPRQ+DVN+ Sbjct: 240 NSLNYSNRNMQFFYVNGRYVKNKTLSAAVDEAFKTYIPVNRYPAVFLYMEIDPRQIDVNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK--------MISSFHQDNAP 351 HP+K I+F + I + ++I+ +++K + + +K S Q Sbjct: 300 HPSKLEIKFSDERRIFEAVYKTIKDSLHKYNLIPEVKIEEKKNIFEIETPTISAEQTKLY 359 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG---- 407 T K + F +N +++L + S DN E H + Sbjct: 360 FTSSDKEVEKEKKKFDNEFKGKNVFLKDNVLKENSKNSSLDNHLAVYEEYEHEKEEINKN 419 Query: 408 ---------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 + YII + D I+DQHAAHER+++EK + KI ++ + Sbjct: 420 DLAKKISDIRIVGTLFSTYIIVEKEDVFYIIDQHAAHERILYEKFTSQYE--KIQTRQVT 477 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P +++L + L+ + E L++LG E FG N+I +RE+P IL + QL DI++ Sbjct: 478 FPIVVELQPRDLELVHQEKELLNKLGYVFEEFGNNSIILREVPVILGQPEARQLFIDIVE 537 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ D + + ENI+ MAC ++++ + E+N+L +++ N C HGRP Sbjct: 538 KLKDKELVNKISLKEENII-MMACKAAVKAMDNLSEKEINKLFDDLKITENPYTCPHGRP 596 Query: 579 TFIKLKLSDIEKLFGR 594 I + + +EK+F R Sbjct: 597 VIIAITKTQLEKMFKR 612 >gi|229151969|ref|ZP_04280165.1| DNA mismatch repair protein mutL [Bacillus cereus m1550] gi|228631524|gb|EEK88157.1| DNA mismatch repair protein mutL [Bacillus cereus m1550] Length = 647 Score = 511 bits (1317), Expect = e-142, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S E Sbjct: 359 KEPSIPDIVLPTGMDAKQEEPQAVKQPPQLWQPPKQEWQPPQSLIREEQSWQPSTKPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIQEEKSWDSNEEDFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|269837642|ref|YP_003319870.1| DNA mismatch repair protein MutL [Sphaerobacter thermophilus DSM 20745] gi|269786905|gb|ACZ39048.1| DNA mismatch repair protein MutL [Sphaerobacter thermophilus DSM 20745] Length = 585 Score = 511 bits (1317), Expect = e-142, Method: Composition-based stats. Identities = 189/604 (31%), Positives = 310/604 (51%), Gaps = 30/604 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L E I +IAAGE+IERP+ +KEL+EN+LDA + V I GG+ +++D+G Sbjct: 1 MPIRLLDEDTIGKIAAGEVIERPASVVKELVENALDAGARSVRVEIRAGGRELIRVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +EE+P+A+QRH TSK++ DD + + ++GFRGEAL SI AV+ L ++SRPP + Sbjct: 61 HGIPAEELPLAIQRHATSKVTRFDDLARLTSYGFRGEALASIAAVAELRIVSRPPDSPHA 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 A + ++ V PGT V VRDLF +PAR FL+ + E + V++ A+A Sbjct: 121 ASLVSRNGRVEPPTTVPAAPGTTVTVRDLFAHVPARRAFLRQDHTEAAYVQRVVQACALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV--------ELNEKSNE 230 P+V F + + +G+ I V G D V E + + Sbjct: 181 APEVRFELVSDGR---TVLATDGSGDLGNTIVGVFGPDIAAEMVPIVPPADDEHDPERPA 237 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 +T+ GY G+PT RGN + +N R ++ + + + AY I +GR+PV VL + + Sbjct: 238 VTVSGYVGLPTLTRGNRQHIILLVNRRWIESRSLTFALEQAYHSLIMVGRFPVAVLHITV 297 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 P ++DVNVHP K +RF + ++ I ++++ + + + Q Sbjct: 298 APERLDVNVHPTKREVRFSDERLVFAAIQRAVRGTLTQHTPA--------------QTIP 343 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC 410 T P A ++ R + E V + + Sbjct: 344 SFTTTPLSAPTVQRRLALSHPDRFRPTPPPPPEDTPGDDQEAGMTVVPDPGSAVPVLRVL 403 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 Q+ YII++ DG+ ++DQHAAHER++FE++ Q F K QTLL P +I+L + Sbjct: 404 GQVGATYIIAEGPDGMYLIDQHAAHERVLFEQLWQQFERAKPDIQTLLEPLVIELSPVQL 463 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 E++ ++G E FG +A+A+R +PAI ++++ +L I+DE+ TL Sbjct: 464 ETAERCREEMAQIGFHIEPFGGSAVAVRAVPAIAARRDPRAVLLGILDEMAAGGRGTTL- 522 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 +E++ + AC+ +IR+G+ + EM L+ ++E+ C HGRPT + L ++E+ Sbjct: 523 --LESLTISTACHSAIRAGQTLSLPEMRELIAQLERCTAPRACGHGRPTMLHLSQEELER 580 Query: 591 LFGR 594 F R Sbjct: 581 QFER 584 >gi|229191893|ref|ZP_04318863.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 10876] gi|228591444|gb|EEK49293.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 10876] Length = 647 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S E Sbjct: 359 KEPSMPDIILPTGMDAKQEEPQTVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIQEEKSWDSNEEDFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|228966711|ref|ZP_04127755.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar sotto str. T04001] gi|228792810|gb|EEM40368.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar sotto str. T04001] Length = 647 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 184/648 (28%), Positives = 298/648 (45%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T+ GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTITGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS------------------------ 335 HPAK +RF + I +++Q A K + + Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKDKDESVQEQFQFEHAKP 358 Query: 336 --VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 ++ D + LP + K Q + + T Sbjct: 359 KEPSMPDIVLPTGMDEKQEEPLPVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTRPIME 418 Query: 394 DPVEESEATHYQ---------------------------LGIACAQIHQNYIISQTTDGL 426 +P+ E ++ Q+H YI +Q GL Sbjct: 419 EPIREEKSWDSNEEDFELEELEEEVQEIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|30021860|ref|NP_833491.1| DNA mismatch repair protein [Bacillus cereus ATCC 14579] gi|218231496|ref|YP_002368571.1| DNA mismatch repair protein [Bacillus cereus B4264] gi|228959975|ref|ZP_04121640.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar pakistani str. T13001] gi|229047451|ref|ZP_04193043.1| DNA mismatch repair protein mutL [Bacillus cereus AH676] gi|229111241|ref|ZP_04240795.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-15] gi|229129045|ref|ZP_04258018.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-Cer4] gi|229146340|ref|ZP_04274711.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST24] gi|296504267|ref|YP_003665967.1| DNA mismatch repair protein [Bacillus thuringiensis BMB171] gi|81837324|sp|Q81A26|MUTL_BACCR RecName: Full=DNA mismatch repair protein mutL gi|226723028|sp|B7HDP3|MUTL_BACC4 RecName: Full=DNA mismatch repair protein mutL gi|29897416|gb|AAP10692.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 14579] gi|218159453|gb|ACK59445.1| DNA mismatch repair protein MutL [Bacillus cereus B4264] gi|228636973|gb|EEK93432.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST24] gi|228654282|gb|EEL10147.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-Cer4] gi|228672235|gb|EEL27525.1| DNA mismatch repair protein mutL [Bacillus cereus Rock1-15] gi|228723895|gb|EEL75248.1| DNA mismatch repair protein mutL [Bacillus cereus AH676] gi|228799718|gb|EEM46670.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar pakistani str. T13001] gi|296325319|gb|ADH08247.1| DNA mismatch repair protein [Bacillus thuringiensis BMB171] Length = 647 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S E Sbjct: 359 KEPSMPDIVLPTGMDAKQEEPQAVKQPPQLWQPPKQEWQPPQSLIREEQSWQPSTKPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIQEEKSWDSNEEDFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|229123282|ref|ZP_04252486.1| DNA mismatch repair protein mutL [Bacillus cereus 95/8201] gi|228660058|gb|EEL15694.1| DNA mismatch repair protein mutL [Bacillus cereus 95/8201] Length = 647 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S E Sbjct: 359 KEPSMPEIVLPTGMDEKQEEPQAVKQPTQLWQPPKQEWQPPQSLVREEQSWQPSTKPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIQEEKSWDSNEESFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|196034149|ref|ZP_03101559.1| DNA mismatch repair protein MutL [Bacillus cereus W] gi|228916406|ref|ZP_04079973.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228947489|ref|ZP_04109779.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195993223|gb|EDX57181.1| DNA mismatch repair protein MutL [Bacillus cereus W] gi|228812009|gb|EEM58340.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228843209|gb|EEM88290.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 647 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S E Sbjct: 359 KEPSMPEIVLPTGMDEKQEEPQAVKQPTQLWQPPKQEWQPPQSLVREEQSWQPSTKPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIQEEKSWDSNEEGFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|196044440|ref|ZP_03111675.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB108] gi|225865749|ref|YP_002751127.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB102] gi|254766158|sp|C1ENZ2|MUTL_BACC3 RecName: Full=DNA mismatch repair protein mutL gi|196024475|gb|EDX63147.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB108] gi|225787379|gb|ACO27596.1| DNA mismatch repair protein MutL [Bacillus cereus 03BB102] Length = 647 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 186/648 (28%), Positives = 301/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM---------ISSFHQDNA 350 HPAK +RF + I +++Q A K + + ++ K F Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 351 PKTHLP----------KYATSLTNTQEKLFLQENRLSTN-------DLLPSDDPTYSEDN 393 + +P K L Q Q + + T Sbjct: 359 KEPSMPDIILPTGMDEKQEEPLAVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKPIME 418 Query: 394 DPVEESEATHYQ---------------------------LGIACAQIHQNYIISQTTDGL 426 +P+ E ++ Q+H YI +Q GL Sbjct: 419 EPIREEKSWDSNEEDFELEELEEEVQEIEEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|228935065|ref|ZP_04097895.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824635|gb|EEM70437.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 647 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S E Sbjct: 359 KEPSMPEIVLPTGMDEKQEEPQAVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIQEEKSWDSNEEGFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|152976134|ref|YP_001375651.1| DNA mismatch repair protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189030390|sp|A7GR98|MUTL_BACCN RecName: Full=DNA mismatch repair protein mutL gi|152024886|gb|ABS22656.1| DNA mismatch repair protein MutL [Bacillus cytotoxicus NVH 391-98] Length = 649 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 188/650 (28%), Positives = 306/650 (47%), Gaps = 62/650 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL E++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDEQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELVTSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G +I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGEIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS K+ S NG+ + ++ + + + +S + T++GY + Sbjct: 182 PEVSLKLFHNTK---KLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDFTIRGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNYVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS------------------------- 334 HPAK +RF + FI Q++Q A K + Sbjct: 299 HPAKLEVRFSKEQELLQFIEQTLQDAFKKVQLIPDAGVTTKKKTKDESVQEQFHFEHTKP 358 Query: 335 -------------------------SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKL 369 ++ ++ Q+ P L + S +T + L Sbjct: 359 KEPSMPNIVLPTGMDEAQEEESAEKPSVAPQLWQQPKQEWQPPQSLVREEESWQSTSKPL 418 Query: 370 FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ-----LGIACAQIHQNYIISQTTD 424 ++ + + ++ E+ D ++ E Q+H YI +Q Sbjct: 419 IEEKAAHNEQEWDHHEEEFELEELDELQNIEEIEMNGNDLPPLYPIGQMHGTYIFAQNDK 478 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G Sbjct: 479 GLYMIDQHAAQERINYEYFRDKVGQVTQEVQELLVPYRIDLSLNEFLRVEEQLEELKKVG 538 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 + E+FG + +R P K +++ +++ +++ ++ E M+C Sbjct: 539 LFLEQFGHQSFIVRSHPIWFPKGKETEIIDEMMQQVVKLKKVD-IKKLREEAAIMMSCKA 597 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ + + + ++ LL E+ N C HGRP I ++EK+F R Sbjct: 598 SIKANQYLTNDQIFALLEELRTTSNPYTCPHGRPIIIHHSTYELEKMFKR 647 >gi|229092806|ref|ZP_04223944.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-42] gi|228690604|gb|EEL44385.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-42] Length = 647 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S E Sbjct: 359 KEPSMPDIILPTGMDEKQEEPLAVKQPTQLWQPPKQEWQPPQSLVREEQSWQPSTKPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIQEEKSWDSNEEGFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|322517656|ref|ZP_08070521.1| DNA mismatch repair protein HexB [Streptococcus vestibularis ATCC 49124] gi|322123733|gb|EFX95318.1| DNA mismatch repair protein HexB [Streptococcus vestibularis ATCC 49124] Length = 645 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 176/633 (27%), Positives = 305/633 (48%), Gaps = 44/633 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE++ERP+ +KEL+EN++DA S+++ + G S QITDNG Sbjct: 3 KIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ M+++RH TSKI + D I T GFRGEALPSI ++SHLT+++ G Sbjct: 63 GMAQADVAMSLRRHATSKIKNQGDLFRIRTLGFRGEALPSIASISHLTIVTAADGEAYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ +I S P++ GT + V +LF+ PARL ++KS Q E I DV+ R+++A+ Sbjct: 123 KLVAKAGEIESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT ++ S G+ + I+ + G VE++ + + GY + Sbjct: 183 PEVAFTLLNDGR---QLTQTSGTGDLRQAIAGIYGLTTAKKMVEISNSDLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAIFDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I +I +++ ++ + ++ + S+ + +T LP Sbjct: 300 HPTKQEVRISKEKELMALISSAIAQSLREQDLIPDALENLAKSSTRGAAKSVQTSLPLKQ 359 Query: 357 -----------------------------------KYATSLTNTQEKLFLQENRLSTNDL 381 K + Q + + E+ L Sbjct: 360 TNLYYDSSRNDFFVKPETVQEDIKPLVSESSVSSVKNKPQPSVKQAQRSVDESDSEHEKL 419 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 + + + E + + Q+H Y+ +Q GL I+DQHAA ER+ +E Sbjct: 420 DYKNKSKLKRMLENLTNEETSTFPELEFFGQMHGTYLFAQGQGGLYIIDQHAAQERVKYE 479 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 R+ + Q LL P + + + + E L+++GI E +G N +RE P Sbjct: 480 YYREKIGEVDSSLQQLLVPYLFEFSGSDYISLQEKMSLLNQVGIYLEPYGNNTFILREHP 539 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 + ++ I + ++ D ++ ++ +++ + M+C SI++ + LL Sbjct: 540 IWMKEEEIESAVYEMCDMLLLTNEV-SVKTYRAELAIMMSCKRSIKANHALDDYSARDLL 598 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + N C HGRP + SD+EK+F R Sbjct: 599 VQLAQCKNPYNCPHGRPVLVNFTKSDMEKMFRR 631 >gi|114327127|ref|YP_744284.1| DNA mismatch repair protein mutL [Granulibacter bethesdensis CGDNIH1] gi|114315301|gb|ABI61361.1| DNA mismatch repair protein mutL [Granulibacter bethesdensis CGDNIH1] Length = 619 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 221/611 (36%), Positives = 337/611 (55%), Gaps = 22/611 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR LS+ IN+IAAGE+IERP+ +KEL+EN+LDA ++R+ + GGG + ++ D+G Sbjct: 12 RIRLLSDTTINRIAAGEVIERPAAVVKELVENALDAGATRIVVALEGGGITRIEVRDDGS 71 Query: 62 GMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GMT EE+ +A+QRH TSK++DD I T GFRGEALPSIGA L++ SR + Sbjct: 72 GMTEEELALAIQRHATSKLTDDSLIRIATLGFRGEALPSIGAAGRLSITSRTAACDHAHS 131 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G ++ +V P + GT + VRDLFF PAR FLK+ + E + +RR+A + P Sbjct: 132 ITVEGGRVGAVIPASGPQGTRIVVRDLFFATPARRKFLKTPRSEADQAEIAVRRLAFSAP 191 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+F + + + RI+ ++GE+ + ++ + + + L G+ P Sbjct: 192 HVAFRCEIDGREIFDLPAATPQA----RIAALLGEEAAAAILPVSAERDTLLLGGFICAP 247 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T R +NGR V D + + +R AY + IP GR+PVV L L + P VDVNVH Sbjct: 248 TLTRATGASQSFVVNGRPVTDPMLRTALRVAYRDVIPYGRHPVVALELTVPPEDVDVNVH 307 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAIN----------KKGISTSSVLSKKMI------SS 344 PAK+ +RFR+ +R II +I + + + G SS LS S Sbjct: 308 PAKTELRFRDAAAVRGLIIGAISRTLAAGVGGPVGQTENGGKASSTLSIPPPRLNISRPS 367 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 + E ++ + + S T + + P Y Sbjct: 368 YTPTRGGGYAAAPPVRPHFGFAEAQLPLQDAPAARGAMSSAPETVQDRSAPAPPLPDPAY 427 Query: 405 QLGIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 LG A AQ+ Y+I+ DG LV+VDQHAAHERL E +R + SQ LL PE++ Sbjct: 428 PLGAAVAQVLDTYVIAVAADGALVLVDQHAAHERLTHEALRSALLDGTVNSQALLLPEVV 487 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 ++ E +++ L +LG+ E FGP A+ +R +PA+L +++ LLRDI +E+ + Sbjct: 488 EMPPREATHLLDAASSLAKLGLDIEAFGPGAVLVRALPALLKPQSVSALLRDIAEELAEL 547 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + L+ R++ ++A MAC+GSIR+GR++ EMN LLR+ME P ++ C+HGRPT ++L Sbjct: 548 GASIALESRLDAVIARMACHGSIRAGRRLTVPEMNALLRQMEATPRAATCSHGRPTVLRL 607 Query: 584 KLSDIEKLFGR 594 ++IE LFGR Sbjct: 608 SKAEIESLFGR 618 >gi|218898868|ref|YP_002447279.1| DNA mismatch repair protein MutL [Bacillus cereus G9842] gi|226723027|sp|B7ITM0|MUTL_BACC2 RecName: Full=DNA mismatch repair protein mutL gi|218541786|gb|ACK94180.1| DNA mismatch repair protein MutL [Bacillus cereus G9842] Length = 647 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 184/648 (28%), Positives = 298/648 (45%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T+ GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTITGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS------------------------ 335 HPAK +RF + I +++Q A K + + Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 336 --VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 ++ D + LP + K Q + + T Sbjct: 359 KEPSMPDIVLPTGMDEKQEEPLPVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTRPIME 418 Query: 394 DPVEESEATHYQ---------------------------LGIACAQIHQNYIISQTTDGL 426 +P+ E ++ Q+H YI +Q GL Sbjct: 419 EPIREEKSWDSNEEDFELEELEEEVQEIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|52141721|ref|YP_085109.1| DNA mismatch repair protein [Bacillus cereus E33L] gi|81686628|sp|Q636Q8|MUTL_BACCZ RecName: Full=DNA mismatch repair protein mutL gi|51975190|gb|AAU16740.1| DNA mismatch repair protein, MutL family [Bacillus cereus E33L] Length = 647 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 186/648 (28%), Positives = 301/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM---------ISSFHQDNA 350 HPAK +RF + I +++Q A K + + ++ K F Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 351 PKTHLP----------KYATSLTNTQEKLFLQENRLSTN-------DLLPSDDPTYSEDN 393 + +P K L Q Q + + T Sbjct: 359 KEPSMPEIVLPTGMDEKQEEPLAVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKPIME 418 Query: 394 DPVEESEAT---------------------------HYQLGIACAQIHQNYIISQTTDGL 426 +P+ E ++ Q+H YI +Q GL Sbjct: 419 EPIREEKSWNSNDEDFELEELEEEVQEIEEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|49479185|ref|YP_037829.1| DNA mismatch repair protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|81828232|sp|Q6HF47|MUTL_BACHK RecName: Full=DNA mismatch repair protein mutL gi|49330741|gb|AAT61387.1| DNA mismatch repair protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 647 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 186/648 (28%), Positives = 301/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM---------ISSFHQDNA 350 HPAK +RF + I +++Q A K + + ++ K F Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQTAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 351 PKTHLP----------KYATSLTNTQEKLFLQENRLSTN-------DLLPSDDPTYSEDN 393 + +P K L Q Q + + T Sbjct: 359 KEPSMPDIILPMGMDEKQEEPLAVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKPIME 418 Query: 394 DPVEESEATHYQ---------------------------LGIACAQIHQNYIISQTTDGL 426 +P+ E ++ Q+H YI +Q GL Sbjct: 419 EPIREEKSWDSNEEDFELEELEEEVREIEEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|47568272|ref|ZP_00238975.1| DNA mismatch repair protein HexB [Bacillus cereus G9241] gi|47555100|gb|EAL13448.1| DNA mismatch repair protein HexB [Bacillus cereus G9241] Length = 647 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQGAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S E Sbjct: 359 KEPSMPDIILPTGMDEKQEEPLAVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKPIME 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIREEKSWDSNEEDFELEELEEEVQEIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|228922483|ref|ZP_04085785.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837197|gb|EEM82536.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 647 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 186/648 (28%), Positives = 301/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS--VLSKKMISSFHQDNAPKTHLPK 357 HPAK +RF + I +++Q A K + + KK Q+ H Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 358 YATSLTN------------------------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 S+ + K Q + + T Sbjct: 359 KEPSMPDIVLPTGMDAKQEEPEAVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKPIIE 418 Query: 394 DPVEESEATHYQ---------------------------LGIACAQIHQNYIISQTTDGL 426 +P++E ++ Q+H YI +Q GL Sbjct: 419 EPIQEKKSWDSNEEDFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|194337682|ref|YP_002019476.1| DNA mismatch repair protein MutL [Pelodictyon phaeoclathratiforme BU-1] gi|238693415|sp|B4SGC3|MUTL_PELPB RecName: Full=DNA mismatch repair protein mutL gi|194310159|gb|ACF44859.1| DNA mismatch repair protein MutL [Pelodictyon phaeoclathratiforme BU-1] Length = 626 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 186/628 (29%), Positives = 311/628 (49%), Gaps = 40/628 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L + + N+I+AGE+++RP+ +KEL+EN++DA + ++ I GK +I DNG Sbjct: 3 RIARLPDIVANKISAGEVVQRPASVVKELLENAIDAGADKITVAIKDAGKELIRIVDNGA 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ + V+R TSKI+ DD ++ + GFRGEAL SI +VSH L +R + G Sbjct: 63 GMLREDALLCVERFATSKITGVDDLDSLQSLGFRGEALASISSVSHFELKTRTAKATLGL 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G + V GT + VR+LF+ +PAR FLKS E N I ++++ A+AY Sbjct: 123 RLRYEGGVLVEESGVQGEQGTTISVRNLFYNVPARRKFLKSNATEYNHIFEIVKSFALAY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + + + + + ER++ G+DF + +EL+E+++ ++++GY G Sbjct: 183 PEIEWRMYSDDEELFHVK----RPDILERLNVFYGDDFAASMIELSEENDYLSIKGYLGK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + Y F+N R VQ++ + ++ AY + + + P V+L L IDP ++DVNV Sbjct: 239 PAMQKRRKLDQYFFVNRRVVQNRMLSQAVQQAYGDLLVERQTPFVLLFLTIDPSRIDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS--------KKMISSFHQDNAP 351 HPAK IRF + +RN I++AI S V + + S+F + + P Sbjct: 299 HPAKMEIRFDDERNVRNMFYPVIKRAIQLHDFSPDLVSTECDQLSSLQPQNSAFRKFSFP 358 Query: 352 KTHLPKYATS--LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV------------- 396 T N +E + + D Sbjct: 359 DIPHRSITTGDLYRNYREGAVDEPAISRVASAHQGEMFPRHSSADYALAGSGLREGDEGL 418 Query: 397 ----------EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 ++ ++ Q+H Y+I Q GL+I+DQH AHER+++E+ Sbjct: 419 SSILLAPLYDDDVVPNPKEVEPKIWQLHNKYLICQIKTGLMIIDQHVAHERVLYERAVDV 478 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 N SQ LL P+ ++ E + E EDL+RLG FG I I +P + Sbjct: 479 MNQNVPNSQQLLFPQKVEFRPWEYEIFEEIREDLYRLGFNLRLFGNKTIMIEGVPQDVKP 538 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 + +L+D+I E D+++ L D+ +N+ + +C +I +G+K+ EM L+ + Sbjct: 539 GSEVTILQDMIAEYQDNASKLKL-DKRDNLAKSYSCRNAIMAGQKLSLEEMRSLIDNLFA 597 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP IKL L ++K+FGR Sbjct: 598 TREPYSCPHGRPVIIKLSLDQLDKMFGR 625 >gi|301055258|ref|YP_003793469.1| DNA mismatch repair protein [Bacillus anthracis CI] gi|300377427|gb|ADK06331.1| DNA mismatch repair protein [Bacillus cereus biovar anthracis str. CI] Length = 647 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 186/648 (28%), Positives = 301/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM---------ISSFHQDNA 350 HPAK +RF + I +++Q A K + + ++ K F Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 351 PKTHLP----------KYATSLTNTQEKLFLQENRLSTN-------DLLPSDDPTYSEDN 393 + +P K L Q Q + + T Sbjct: 359 KEPSMPDIILPTGMDEKQEEPLAVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKPIME 418 Query: 394 DPVEESEAT---------------------------HYQLGIACAQIHQNYIISQTTDGL 426 +P+ E ++ Q+H YI +Q GL Sbjct: 419 EPIREEKSWESNEEDFELEELEEEVREIEEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|196038472|ref|ZP_03105781.1| DNA mismatch repair protein MutL [Bacillus cereus NVH0597-99] gi|228986912|ref|ZP_04147039.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229197879|ref|ZP_04324595.1| DNA mismatch repair protein mutL [Bacillus cereus m1293] gi|196030880|gb|EDX69478.1| DNA mismatch repair protein MutL [Bacillus cereus NVH0597-99] gi|228585597|gb|EEK43699.1| DNA mismatch repair protein mutL [Bacillus cereus m1293] gi|228772861|gb|EEM21300.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 647 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S E Sbjct: 359 KEPSMPDIILPTGMDEKQEEPLAVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKPIME 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIREEKSWDSNEEDFELEELEEEVQEIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|228940846|ref|ZP_04103406.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228973767|ref|ZP_04134344.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980322|ref|ZP_04140633.1| DNA mismatch repair protein mutL [Bacillus thuringiensis Bt407] gi|228779427|gb|EEM27683.1| DNA mismatch repair protein mutL [Bacillus thuringiensis Bt407] gi|228785919|gb|EEM33921.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818860|gb|EEM64925.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326941481|gb|AEA17377.1| DNA mismatch repair protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 647 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 184/648 (28%), Positives = 298/648 (45%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-------------------------- 333 HPAK +RF + I +++Q A K + Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 334 --------------------------SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQE 367 L + + + + S E Sbjct: 359 KEPSMPDIVLPTGMDAKQEEPQAVKQPPQLWQPPKQEWQPPQSLIKEEQSWQPSTRPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIREEKSWDSNEEDFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|218290140|ref|ZP_03494302.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius LAA1] gi|218239849|gb|EED07038.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius LAA1] Length = 628 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 182/628 (28%), Positives = 312/628 (49%), Gaps = 39/628 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ + + + +QIA+GE++ RP+ +KEL+ENSLDA ++R+E +A GG + + D+G Sbjct: 3 KIQVMPKVMADQIASGEVVARPASCVKELVENSLDAGATRIEVSLAEGGIACVTVVDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E+ +A RH TSK+ + D + I T GFRGEAL +I +V+ + L++R +G Sbjct: 63 GMSPEDAVLAFHRHATSKVHEPRDLARIRTLGFRGEALAAIASVARVRLITRARGEESGV 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G +I PV GT +EVRDLFF PARL +L+S Q E +V++R ++A+ Sbjct: 123 LVRVEGGEIHPPEPVGAPFGTTMEVRDLFFNTPARLKYLRSAQTEQARSVEVVQRESLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F T R + G+ E + + G +E++ + + L+GY G Sbjct: 183 PEVAFVCRTE---RQVLFQTPGRGDAREVWAALYGVGEARMLLEVHGATGDYALRGYVGR 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT R + Y+FINGR V++ + + AY E + +GRYPV L LE+DP VD NV Sbjct: 240 PTQARSSRQHGYLFINGRPVRNPAVQQAVERAYGERLMVGRYPVYALYLEMDPALVDPNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH-----QDNAPKTH 354 HP K +R + + + +++ A++ ++ + + + + + Sbjct: 300 HPQKWEVRLSEERDVCDLVESAVRAALDNVMLTAAPRVRTSAPLASPVPLNLPEESAGPR 359 Query: 355 LPKYATSLTNTQEK----------------------------LFLQENRLSTNDLLPSDD 386 + + S Q+K L ++E+ + ++ Sbjct: 360 EMRQSPSPAAAQKKRPQVLTRWPSFGEGSGRTPAPREAWESALAVRESAAAQVEIEHETR 419 Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 + +E + E Q + YI+++ + L I+DQHAAHER+++E + Sbjct: 420 ASQAEGDGRDVPQERPADWRLRPIGQALRMYILAEDGNDLYIIDQHAAHERVLYEDLLDA 479 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 + +I LLTP + L +M E+L LG + + FG + I +R IP Sbjct: 480 WQQGEIQPMPLLTPLELSLTPSAFEEVMARREELLALGFEIDPFGAHTILVRTIPDSWQG 539 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 + LLRD++D++ T +D + LAT AC +I++ + EM L R + + Sbjct: 540 LDYAALLRDVLDDLASMGPKATARDIMHR-LATRACKAAIKAHDSLTMPEMEALCRRLTR 598 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP F+++ ++ K F R Sbjct: 599 ARDPYHCPHGRPIFLRMSERELAKSFRR 626 >gi|229031398|ref|ZP_04187399.1| DNA mismatch repair protein mutL [Bacillus cereus AH1271] gi|228729893|gb|EEL80872.1| DNA mismatch repair protein mutL [Bacillus cereus AH1271] Length = 647 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 184/648 (28%), Positives = 301/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + + + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ ++ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAVQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM---------ISSFHQDNA 350 HPAK +RF + I +++Q A K + + ++ K F Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 351 PKTHLP----------KYATSLTNTQEKLFLQENRLSTN-------DLLPSDDPTYSEDN 393 + +P K L Q Q + + T Sbjct: 359 KEPSMPDIILPTGMDEKREEPLAAKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKPITE 418 Query: 394 DPVEESEAT---------------------------HYQLGIACAQIHQNYIISQTTDGL 426 +P+ E ++ Q+H YI +Q GL Sbjct: 419 EPIREEKSWNSNDEDFELEELEEEVQEIEEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|229162703|ref|ZP_04290660.1| DNA mismatch repair protein mutL [Bacillus cereus R309803] gi|228620585|gb|EEK77454.1| DNA mismatch repair protein mutL [Bacillus cereus R309803] Length = 647 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 186/648 (28%), Positives = 301/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLMIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM---------ISSFHQDNA 350 HPAK +RF + I +++Q A K + + ++ K F Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHTKP 358 Query: 351 PKTHLP----------KYATSLTNTQEKLFLQENRLSTN-------DLLPSDDPTYSEDN 393 + +P K L Q Q + + T Sbjct: 359 KEPSMPDIILPTGMDEKQEEPLAIKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKPIME 418 Query: 394 DPVEESEAT---------------------------HYQLGIACAQIHQNYIISQTTDGL 426 +P+ E ++ Q+H YI +Q GL Sbjct: 419 EPIREEKSWSSNDEDFELEELEEEVQEIEEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|229061371|ref|ZP_04198717.1| DNA mismatch repair protein mutL [Bacillus cereus AH603] gi|228717910|gb|EEL69556.1| DNA mismatch repair protein mutL [Bacillus cereus AH603] Length = 647 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 184/648 (28%), Positives = 303/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIRQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + + + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPIGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM---------ISSFHQDNA 350 HPAK +RF + I +++Q A K + + ++ K F Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQGQFQFEHTKP 358 Query: 351 PKTHLP----------KYATSLTNTQEKLFLQENRLSTN-------DLLPSDDPTYSEDN 393 + +P K + Q Q + + T + Sbjct: 359 KEPSMPNIVLPTGMDEKREEPMPVKQPAQLWQPPKQEWQPPQSLVREEQNWQPSTKTIIE 418 Query: 394 DPVEESEAT---------------------------HYQLGIACAQIHQNYIISQTTDGL 426 +P+ E ++ Q+H YI +Q +GL Sbjct: 419 EPIREEKSWNSNEEDFELEELEEEVGEIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDNGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|312863945|ref|ZP_07724182.1| DNA mismatch repair protein, C-terminal domain protein [Streptococcus vestibularis F0396] gi|311100511|gb|EFQ58717.1| DNA mismatch repair protein, C-terminal domain protein [Streptococcus vestibularis F0396] Length = 645 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 176/633 (27%), Positives = 305/633 (48%), Gaps = 44/633 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE++ERP+ +KEL+EN++DA S+++ + G S QITDNG Sbjct: 3 KIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ M+++RH TSKI + D I T GFRGEALPSI ++SHLT+++ G Sbjct: 63 GMAQADVAMSLRRHATSKIKNQGDLFRIRTLGFRGEALPSIASISHLTIVTAADGEAYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ +I S P++ GT + V +LF+ PARL ++KS Q E I DV+ R+++A+ Sbjct: 123 KLVAKAGEIESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT ++ S G+ + I+ + G VE++ + + GY + Sbjct: 183 PEVAFTLLNDGR---QLTQTSGTGDLRQAIAGIYGLTTAKKMVEISNSDLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAIFDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I +I +++ ++ + ++ + S+ + +T LP Sbjct: 300 HPTKQEVRISKEKELMVLISSAIAQSLREQDLIPDALENLAKSSTRGAAKSVQTSLPLKQ 359 Query: 357 -----------------------------------KYATSLTNTQEKLFLQENRLSTNDL 381 K + Q + + E+ L Sbjct: 360 TNLYYDSSRNDFFVKPETVQEDIKPLVSESSVSSVKNKPQPSVKQAQRSVDESDSEHEKL 419 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 + + + E + + Q+H Y+ +Q GL I+DQHAA ER+ +E Sbjct: 420 DYKNKSKLKRMLENLTNEETSTFPELEFFGQMHGTYLFAQGQGGLYIIDQHAAQERVKYE 479 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 R+ + Q LL P + + + + E L+++GI E +G N +RE P Sbjct: 480 YYREKIGEVDSSLQQLLVPYLFEFSGSDYISLQEKMSLLNQVGIYLEPYGNNTFILREHP 539 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 + ++ I + ++ D ++ ++ +++ + M+C SI++ + LL Sbjct: 540 IWMKEEEIESAVYEMCDMLLLTNEV-SVKTYRAELAIMMSCKRSIKANHALDDYSARDLL 598 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + N C HGRP + SD+EK+F R Sbjct: 599 VQLAQCKNPYNCPHGRPVLVNFTKSDMEKMFRR 631 >gi|229157347|ref|ZP_04285425.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 4342] gi|228626074|gb|EEK82823.1| DNA mismatch repair protein mutL [Bacillus cereus ATCC 4342] Length = 647 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 185/648 (28%), Positives = 300/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-------------------------- 333 HPAK +RF + I +++Q A K + Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKNKEKDESVQEQFQFEHAKP 358 Query: 334 --------------------------SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQE 367 S+ L + + + + S E Sbjct: 359 KEPSMPDIILPTGMDEKQEEPLAVKQSAQLWQPPKQEWQPPQSLVREEQSWQPSTKPIME 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIREEKSWDSNEEDFELEELEEEVQEIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|229104332|ref|ZP_04235001.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-28] gi|228679030|gb|EEL33238.1| DNA mismatch repair protein mutL [Bacillus cereus Rock3-28] Length = 647 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 182/648 (28%), Positives = 301/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G + A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDVIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + + + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLIPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ ++ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAVQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-------------------------- 333 HPAK +RF + I +++Q A K + Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHTKP 358 Query: 334 --------------------------SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQE 367 + L + + Q + + S E Sbjct: 359 KEPQMPNIVLPTDMDEKQEERTTVKQPAQLWQPPKQEWQQPQSLIREEQSWQPSSKPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E + N+ + E + E E Q+H YI +Q +GL Sbjct: 419 EPIREEKSWNNNEEDFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDNGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|194014279|ref|ZP_03052896.1| DNA mismatch repair protein MutL [Bacillus pumilus ATCC 7061] gi|194013305|gb|EDW22870.1| DNA mismatch repair protein MutL [Bacillus pumilus ATCC 7061] Length = 633 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 187/634 (29%), Positives = 311/634 (49%), Gaps = 46/634 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS+ + N+IAAGE++ERP+ +KEL+EN++DA S+ +E + G S ++ DNG Sbjct: 3 KIIQLSDDLSNKIAAGEVVERPASVVKELMENAIDASSTVIEIDVEEAGLSSIRMIDNGV 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+ +A QRH TSKI D D + T GFRGEALPSI +VSHL + + G Sbjct: 63 GIDAEDCKLAFQRHATSKIKDENDLFRVRTLGFRGEALPSIASVSHLEMKTST-GEGAGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G KI S + + GT + V +LF+ PARL ++K+ E I+DV+ R+A+A+ Sbjct: 122 HLVLQGGKIISEKKTSSRRGTEIVVTNLFYNTPARLKYMKTVHTELGNISDVVNRIALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + + NG+ ++ + G V L+ +S + ++GY + Sbjct: 182 PEVSIRLRHQGK---VLLQTNGNGDVRHVLAAIYGTAVAKKMVPLHVQSLDFEVKGYISL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V+ ++ + Y +P+GR+P+ + +++DP VDVNV Sbjct: 239 PEVTRASRNYMSSVVNGRYVKHFPLVKAVHEGYHTLLPIGRHPITFIEMKMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF-------------- 345 HP+K +R + I Q I+ K+ + S+ + KK Sbjct: 299 HPSKLEVRLSKEQELHELIKQGIKDVFQKQQLIPSASVPKKAPMPAIKNEQQSLTFDAKK 358 Query: 346 ---HQDNAPKTHLPKYATSL-----------------TNTQEKLFLQENRLSTNDLLPSD 385 + P ++ P+ S+ T +F +E L S Sbjct: 359 GNTSEAETPLSYQPEPLESVLYETSHTEAYGMPNQEKTEPSSPVFYEEASSERVQLEESA 418 Query: 386 DPTYSEDNDPVEE-----SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 E+++ E+ SE + Q+H YI++Q GL I+DQHAA ER+ + Sbjct: 419 ASLEYEESELREDAAEAISENERVPVMYPIGQMHGTYILAQNERGLYIIDQHAAQERIKY 478 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 E R+ K Q +L P + + +I EH E L ++G+ E FG + +R Sbjct: 479 EYYREKVGEIKQEVQEMLVPLTFHYSKNDMLIIEEHKEILTKVGVFLEPFGSGSYIVRSH 538 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 P K +L+ +II++++D ++ E M+C GSI++ R +++ E+ L Sbjct: 539 PQWFPKGEEAELIEEIIEQVLDEKRVD-IKKLREEAAIMMSCKGSIKANRHLRNDEIKAL 597 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L E+ + + C HGRP I ++EK+F R Sbjct: 598 LDELRQTKDPFTCPHGRPIIIHHSTYEMEKMFKR 631 >gi|324327662|gb|ADY22922.1| DNA mismatch repair protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 647 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 301/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS--VLSKKMISSFHQDNAPKTHLPK 357 HPAK +RF + I +++Q A K + + KK Q+ H Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 358 YATSLTN------------------------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 S+ + K Q + + T S Sbjct: 359 KEPSMPDIILPTGMDEKQEEPQAVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKSIIE 418 Query: 394 DPVEESEAT---------------------------HYQLGIACAQIHQNYIISQTTDGL 426 +P+ E ++ Q+H YI +Q GL Sbjct: 419 EPIREEKSWNSNDEDFELEELEEEVQEIEEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|319778435|ref|YP_004129348.1| DNA mismatch repair protein MutL [Taylorella equigenitalis MCE9] gi|317108459|gb|ADU91205.1| DNA mismatch repair protein MutL [Taylorella equigenitalis MCE9] Length = 584 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 201/595 (33%), Positives = 333/595 (55%), Gaps = 20/595 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L +K+I+QIAAGE+IERPS +KEL+EN++DA+S+ +E + GGG I DNG Sbjct: 6 QIHLLPDKLISQIAAGEVIERPSSVVKELVENAVDAQSTEIEIRLDGGGIRRIYIRDNGT 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+P+A+ RH TSKI + + + GFRGEAL SI +++ L+++SR + Sbjct: 66 GIPREELPLALTRHATSKIRGLSELETVKSMGFRGEALASIASIARLSIVSRTGDSKNAW 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I S +I + GT VEV +F +PAR FLK+E E D+I+++A+A Sbjct: 126 KIDGSSLEI---AVANGSQGTTVEVNQIFDEVPARRKFLKTEATEFAHSIDIIKKIALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F F RI +V+G DF++ +++E N L+G Sbjct: 183 PDITFRVFHNDKAYANWIASP----FIHRIREVVGADFLSKVFKIDESINICRLRGLIIK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ +++ Y+F+N R V+D+ + ++ AY++ + R P +L ++IDP VDVNV Sbjct: 239 PSEASSKSDKQYIFVNSRFVRDRSLAHAVKNAYSDVLHGDRQPSYILFVDIDPSLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ IRFR+ + I +F+ +SI+ + K S+ + Q+N K Sbjct: 299 HPAKNEIRFRDQSTIYSFVQKSIKATLAKSSGVQESIYT-------PQENHNANFPKKIT 351 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 T TQ+ LQ T + + + +E+ +G A Q+H YI+ Sbjct: 352 PQYTPTQKSFDLQTLESYTPLFISEPQQIKNVTPNSLEDE----LPMGFAIGQLHGIYIL 407 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 +Q +GL+IVD HAAHER+++EK++ I Q LL P +++ E + +LI E+ E Sbjct: 408 AQNKNGLIIVDMHAAHERVVYEKLKNLAFQKNIEVQELLIPIAVNIPEKQLSLIDEYSEF 467 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L +G+ + GP+++A+ +P++LSK NI +++++ +++ + L+++ +IL T Sbjct: 468 LESVGLYMRQTGPSSVAVTAVPSLLSKGNISLMVQEVFEDLEKYGESTILEEKRNHILGT 527 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MAC+ + R+ + EMN LLR+ME + CNHGRPT+ + D++KLF R Sbjct: 528 MACHNAFRANDNISLTEMNALLRQMEITDRADLCNHGRPTWYSWTIQDLDKLFMR 582 >gi|222097214|ref|YP_002531271.1| DNA mismatch repair protein [Bacillus cereus Q1] gi|254766159|sp|B9IV58|MUTL_BACCQ RecName: Full=DNA mismatch repair protein mutL gi|221241272|gb|ACM13982.1| DNA mismatch repair protein MutL [Bacillus cereus Q1] Length = 647 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 186/648 (28%), Positives = 301/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---VLSKKMISSFHQDNAPKTHLP 356 HPAK +RF + I +++Q A K + + K+ S + + P Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFKFEHAKP 358 Query: 357 KYATSLT-----------------------NTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 K + K Q + + T S Sbjct: 359 KEPSMPEIVLPTGMDEKQEEPQAVKQPAQLWQPPKQEWQPPQSLVREEQSWQPSTKSIIE 418 Query: 394 DPVEESEAT---------------------------HYQLGIACAQIHQNYIISQTTDGL 426 +P+ E ++ Q+H YI +Q GL Sbjct: 419 EPIREEKSWNSNDEDFELEELEEEVQEIEEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|206977890|ref|ZP_03238778.1| DNA mismatch repair protein MutL [Bacillus cereus H3081.97] gi|217961189|ref|YP_002339757.1| DNA mismatch repair protein [Bacillus cereus AH187] gi|229140409|ref|ZP_04268964.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST26] gi|226723029|sp|B7HLA2|MUTL_BACC7 RecName: Full=DNA mismatch repair protein mutL gi|206743890|gb|EDZ55309.1| DNA mismatch repair protein MutL [Bacillus cereus H3081.97] gi|217067416|gb|ACJ81666.1| DNA mismatch repair protein MutL [Bacillus cereus AH187] gi|228642970|gb|EEK99246.1| DNA mismatch repair protein mutL [Bacillus cereus BDRD-ST26] Length = 647 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 300/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS--VLSKKMISSFHQDNAPKTHLPK 357 HPAK +RF + I +++Q A K + + KK Q+ H Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 358 YATSLTN------------------------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 S+ K Q + + T S Sbjct: 359 KEPSMPEIVLPTGMDEKQEEPQAVKQSAQLWQPPKQEWQPPQSLVREEQSWQPSTKSIIE 418 Query: 394 DPVEESEAT---------------------------HYQLGIACAQIHQNYIISQTTDGL 426 +P+ E ++ Q+H YI +Q GL Sbjct: 419 EPIREEKSWNSNDEDFELEELEEEVQEIEEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|228909592|ref|ZP_04073415.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 200] gi|228849881|gb|EEM94712.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 200] Length = 647 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 187/648 (28%), Positives = 301/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T+ GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTITGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---------------------- 337 HPAK +RF + I +++Q A K + + + Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 338 --------------------------SKKMISSFHQDNAPKTHL----PKYATSLTNTQE 367 + Q+ P L + TS E Sbjct: 359 KESSMPDIVLPTGMDEKQEEPQAVKQPAQHWQPPKQEWQPPQSLVREEQSWQTSTKPIME 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIREEKSWDSNEEDFELEELEVEVQEIKEIEMNGNDLPPLYPIGQMHGTYIFAQNEKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|322374232|ref|ZP_08048764.1| DNA mismatch repair protein HexB [Streptococcus sp. C150] gi|321276836|gb|EFX53909.1| DNA mismatch repair protein HexB [Streptococcus sp. C150] Length = 647 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 176/635 (27%), Positives = 309/635 (48%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE++ERP+ +KEL+EN++DA S+++ + G S QITDNG Sbjct: 3 KIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ M+++RH TSKI + D I T GFRGEALPSI ++SHLT+++ G Sbjct: 63 GMAQADVAMSLRRHATSKIKNQGDLFRIRTLGFRGEALPSIASISHLTIVTAADGEAYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G +I S P++ GT + V +LF+ PARL ++KS Q E I DV+ R+++A+ Sbjct: 123 KLVAKGGEIESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT ++ S G+ + I+ + G VE++ + + GY + Sbjct: 183 PEVAFTLLNDGR---QLTQTSGTGDLRQAIAGIYGLTTAKKMVEISNSDLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAIFDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS---------------- 343 HP K +R + I +I +++ ++ + ++ + S Sbjct: 300 HPTKQEVRISKEKELMALISSAIAQSLREQDLIPDALENLAKSSTRGATKPVQTSLPLKQ 359 Query: 344 -----------------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTND------ 380 + +D P K + + K +++ + S ++ Sbjct: 360 TNLYYDSSRNDFFVKPETVQEDIKPLVSESKSTATPDENKAKPTVKQAQRSVDEGDNEHE 419 Query: 381 -LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 L + + ++ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 KLDYKNKSKMKRMLENLDNEETSTFPELEFFGQMHGTYLFAQGQGGLYIIDQHAAQERVK 479 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P + + + + E L+++GI E +G N +RE Sbjct: 480 YEYYREKIGEVDSSLQQLLVPYLFEFSGSDYISLQEKMPLLNQVGIYLEPYGNNTFILRE 539 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P + ++ I + ++ D ++ ++ +++ + M+C SI++ + Sbjct: 540 HPIWMKEEEIESAVYEMCDMLLLTNEV-SVKTYRAELAIMMSCKRSIKANHALDDYSARD 598 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 599 LLVQLAQCKNPYNCPHGRPVLVNFTKSDMEKMFRR 633 >gi|78188128|ref|YP_378466.1| DNA mismatch repair protein [Chlorobium chlorochromatii CaD3] gi|123757053|sp|Q3AUA2|MUTL_CHLCH RecName: Full=DNA mismatch repair protein mutL gi|78170327|gb|ABB27423.1| DNA mismatch repair protein MutL [Chlorobium chlorochromatii CaD3] Length = 644 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 181/648 (27%), Positives = 309/648 (47%), Gaps = 59/648 (9%) Query: 1 MKI-RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L + + N+I+AGE+++RP+ +KEL+EN++DA ++++ I GK +I DN Sbjct: 1 MPIITRLPDSVANKISAGEVVQRPASVVKELLENAIDAGATKISVTIKDAGKELIRIADN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM ++ + V+R TSKI +DD +HT GFRGEAL SI +VSH L +R Sbjct: 61 GVGMNRDDALLCVERFATSKIKSADDLDALHTLGFRGEALASICSVSHFELKTRQADATL 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G G + V GT VR+LF+ +PAR FLKS E + + ++++ + Sbjct: 121 GLLFRYDGGSLVEELEVQAEQGTSFSVRNLFYNVPARRKFLKSNATEYHHLFEIVKSFTL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 AYP++ + + N + ER++ G+DF ++ +E+ E+++ + + GY Sbjct: 181 AYPEIEWRMVNDDEELFNFK----NNDVLERLNFYYGDDFASSLIEVAEQNDYLPIHGYL 236 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P + + Y FIN R VQ++ +L ++ AY + + + P V+L L IDP ++DV Sbjct: 237 GKPALQKKRKLEQYFFINRRLVQNRMLLQAVQQAYGDLLVERQTPFVLLFLTIDPSRIDV 296 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ---------- 347 NVHPAK IRF + +R+ I++A+ ST+ + + S+ Sbjct: 297 NVHPAKLEIRFDDERQVRSMFYPVIKRAVQLHDFSTNISVIEPFASASEPFVGSSSQPIF 356 Query: 348 ----DNAPKTHLPKYATSLTNTQEKLFLQ------------------------------- 372 AP+ L++ E+ + Sbjct: 357 SSTSSQAPRMGGGSRRFDLSDAPERAITKNELYRNYREGAFSSPSVASYDAPSPLQQGGL 416 Query: 373 ------ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGL 426 E L + ++ H ++ Q+H Y+I Q GL Sbjct: 417 FALASAEESLFGAQAVHEASENIEAFQLSPLDNIVEHKEVEPKIWQLHNKYLICQIKTGL 476 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 +I+DQH AHER+++E+ + +Q LL P+ ++ E + E +DL+RLG Sbjct: 477 MIIDQHVAHERVLYERALEVMQQNVPNAQQLLFPQKVEFRAWEYEVFEEIRDDLYRLGFN 536 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 FG + I +P + + +L+D+I + +++T L+ R +N+ + +C +I Sbjct: 537 VRLFGNRTVMIEGVPQDVKSGSEVTILQDMITQYQENATKLKLE-RRDNLAKSYSCRNAI 595 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +G+K+ EM L+ + C HGRP IKL L ++K+FGR Sbjct: 596 MTGQKLSMEEMRSLIDNLFATREPYTCPHGRPIIIKLSLDQLDKMFGR 643 >gi|225378111|ref|ZP_03755332.1| hypothetical protein ROSEINA2194_03771 [Roseburia inulinivorans DSM 16841] gi|225210112|gb|EEG92466.1| hypothetical protein ROSEINA2194_03771 [Roseburia inulinivorans DSM 16841] Length = 647 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 189/649 (29%), Positives = 313/649 (48%), Gaps = 59/649 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I L+++ I++IAAGE++ERPS +KEL+EN++DA+++ V I GG SF +ITDN Sbjct: 1 MPEIMLLNQETIDKIAAGEVVERPSSVVKELVENAIDAKATAVTVEIKEGGISFIRITDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +++P+A RH TSKI +D +IH+ GFRGEAL SI AV+ + L+++ + T Sbjct: 61 GCGIEKKQVPIAFLRHSTSKIRSVEDLLSIHSLGFRGEALSSIAAVAQVELITKTYEELT 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G K + GT VR+LF+ +PAR FLK+ Q E I+D++ RMA+ Sbjct: 121 GTRYVIEGSKEIENEEIGAPEGTTFIVRNLFYNVPARRKFLKTAQTEAGYISDLMERMAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P VSF F + S NGN + I + G D + +++ ++ L+G+ Sbjct: 181 SHPDVSFKFINNGQTKLH---TSGNGNEKDLIYHIYGRDITSAVLKVEHETELFKLRGFI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P +RGN N FINGR ++ I +I AY + +YP VL E+D +DV Sbjct: 238 GKPMISRGNRNYENYFINGRYIKSALIAKSIEEAYKGFMMQHQYPFCVLYFEMDSELLDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------- 346 NVHP K +RF I + + + I+ I+ + ++++ + Sbjct: 298 NVHPTKMELRFSQNEEIYHSLFEIIRDTISHRDFIPEVPVTEEKKETIPPVPKHTPEPFE 357 Query: 347 -----QDNAPKTHLPKYATSLTNTQEKLFLQE---------NRLSTNDLLPSDDPTYSED 392 QD + A+ LT +E LF + ++ ++ + Sbjct: 358 IRRRGQDAFFEKMKQTSASPLTVQEENLFAKPLAAEAETNTSKEPIAEIHSEQPTLENNF 417 Query: 393 NDPVEESEATH---------------------------YQLGIACAQIHQNYIISQTTDG 425 + V E + Q+ Y + + D Sbjct: 418 KEIVSEIHDIESTPQETAPIYEQQNLEQLDSHFLTKDARKKHKIIGQLFDTYWLIEYEDK 477 Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L I+DQHAAHE++++E+ + + TSQT+ P I+ L + E + ++ L G Sbjct: 478 LFIIDQHAAHEKVLYERTMKKISEKTFTSQTISPPIILTLNQDEVQALETYEAQLSMFGY 537 Query: 486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 + E FG AI IPA + ++ + +++D+ + S +E + A+M+C + Sbjct: 538 EIEPFGGKEYAITAIPADFTDIDMKTMFIEMLDDFANISGKDAPNLIMEKV-ASMSCKAA 596 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + E+ L+ E+ + N C HGRPT I + +IEK F R Sbjct: 597 VKGNNHLSRPEIEALIDELLELDNPYNCPHGRPTIISMTKYEIEKKFRR 645 >gi|309792273|ref|ZP_07686745.1| DNA mismatch repair protein MutL [Oscillochloris trichoides DG6] gi|308225814|gb|EFO79570.1| DNA mismatch repair protein MutL [Oscillochloris trichoides DG6] Length = 609 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 185/612 (30%), Positives = 309/612 (50%), Gaps = 23/612 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L I QIAAGE++ERP+ IKEL+EN+LDA +SR+ + GGG ++ D+G Sbjct: 1 MPIRLLDATIAAQIAAGEVVERPASVIKELVENALDAGASRITIEVRGGGLRELKVQDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ S E+ +A +RH TSK+ +DD NI T GFRGEALPSI +V+ L ++R G Sbjct: 61 CGIASHEVELAFERHATSKLQVADDLFNIRTLGFRGEALPSIASVAQLVCITRNANEEVG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ I+G + + P +PGT + VR+LF+ +P R +L+SE E + I+ V+++ A+A Sbjct: 121 TELRIAGGDLQARVPCGCSPGTSISVRNLFYNLPVRREYLRSEATELSAISAVVQQYALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS----NEITLQ 234 YP+V F+ + S +G+ + ++ G D + + + + + Sbjct: 181 YPEVRFSMILDGRLALQ---TSGDGDRRSVLIEIYGLDIARQLLPVEAEVGEDLQAVRVS 237 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDK-FILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G P R + + +VF+N R +Q + +++ + AY + GR+P+V L + + P Sbjct: 238 GLISPPELTRSSRSYIHVFVNRRALQPRGPLVAVVEDAYHTMLMKGRHPLVALDIRVHPT 297 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------SFHQ 347 VDVNVHP KS ++FR + + I +++++A+ + S Q Sbjct: 298 AVDVNVHPTKSEVKFRFGPQVHSAIGRAVREALVAGAGIPDWADTNYDPSGVQRRFELRQ 357 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLS-----TNDLLPSDDPTYSEDNDPVEESEAT 402 P A++ ++ +R T + + + Sbjct: 358 LGQPSRPAEPPASAWGVGAAAWDVERSRWDVGGGYTAPAPVDQPEAAAPEIIAAPQPSPA 417 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 Q+ YI+++ +G+ ++DQHAAHER+ +E++ S I SQ LL P + Sbjct: 418 ALPPLRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYERLMTQRASGAIESQGLLLPLV 477 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 + L AL++ + ++L LG E +G + +R PA L I L ++ D + Sbjct: 478 VPLAPASSALLLGYPDELAALGFTLEEWGEG-VRVRSAPATLPSDEIAPALTELADHLAG 536 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 + DR E IL T+AC+ S+R+G+ + EM +LLR++E + C HGRPT I Sbjct: 537 RGGSTP-SDRYEEILITLACHTSVRAGQALSHEEMRQLLRQLEACISPRTCPHGRPTMIL 595 Query: 583 LKLSDIEKLFGR 594 L + +E FGR Sbjct: 596 LSPAQLEHQFGR 607 >gi|329924184|ref|ZP_08279384.1| DNA mismatch repair protein MutL [Paenibacillus sp. HGF5] gi|328940834|gb|EGG37146.1| DNA mismatch repair protein MutL [Paenibacillus sp. HGF5] Length = 659 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 178/658 (27%), Positives = 295/658 (44%), Gaps = 70/658 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L E I NQIAAGE++ERP+ +KEL+EN++DA S++++ + GG ++TDNG G Sbjct: 4 IRILDEHIANQIAAGEVVERPASVVKELVENAIDAGSTKIDVSVEEGGLDSIRVTDNGAG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ A RH TSKI++ D I + GFRGEALPSI AVS + L++ Q+ G + Sbjct: 64 IDPEDCETAFYRHATSKIAEGRDLFQITSLGFRGEALPSIAAVSKVRLVTSNAQDGRGRK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G + A GT V++LF+ PARL ++K+ Q E I+D + R+A++ P Sbjct: 124 IEIEGGHLRVNEETAAPRGTDFLVKELFYNTPARLKYMKTIQTELGHISDYMYRLALSRP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++FT + + NG+ + I+ V G + ++ + TL GY P Sbjct: 184 DIAFTLRHNGN---SLLQTLGNGDALQVIAAVYGTQSAKAMLPFEAENMDYTLSGYISRP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + R N N + INGR +++ ++ I Y +P+ R+P+VV+ L + P +DVNVH Sbjct: 241 DYTRANRNGMSLIINGRYIRNYGLMQAILRGYHTLLPINRFPLVVIQLSMHPSLIDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST---------SSVLSKKMISSFHQDN-- 349 P+K +RF + F+ + ++K + ++ + S + SF Q Sbjct: 301 PSKLEVRFSKEQELFAFVEEEVRKVLQQEILIPRPAKQNIGKSDNAYIQEQLSFPQAQGH 360 Query: 350 -------------------------------------------APKTHLPKYATSLTNTQ 366 P + Y T Sbjct: 361 VGAARGGQDRDLEIPGSGDRSAGGITPPPTPPAAWPDKQSLAPPPSGTMRSYGDGTAETA 420 Query: 367 EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES----------EATHYQLGIACAQIHQN 416 ++E S++ + S N V + E + Q H Sbjct: 421 AASQMRETAASSSYRSDYRNDAKSGGNPAVTKEWLQAVSGPAPEIPPFPELTLIGQHHGT 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y+I+Q GL ++DQHAAHER+ +E + F + SQ LL P ++ E + E Sbjct: 481 YLIAQNDTGLYLIDQHAAHERINYEYYYEQFGNPADASQELLLPITLEFTSSESEKVKER 540 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 ++G+ E FG + +R P K ++ ++ + +++ T + E Sbjct: 541 LHWFEKVGVYMEFFGGHTFLVRSHPFWFPKGEEKAIIEEMAEWVLNERTID-IAKLRETS 599 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C SI++ +K+ E L++ + C HGRP + D+EK+F R Sbjct: 600 SIMCSCKASIKANQKLTEQEAMTLIQRLGACRQPYTCPHGRPIVVSFSAYDLEKMFKR 657 >gi|229000592|ref|ZP_04160132.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock3-17] gi|229006014|ref|ZP_04163703.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock1-4] gi|228755213|gb|EEM04569.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock1-4] gi|228759147|gb|EEM08153.1| DNA mismatch repair protein mutL [Bacillus mycoides Rock3-17] Length = 643 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 183/644 (28%), Positives = 294/644 (45%), Gaps = 56/644 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELVTSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIMQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + + + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLAAIYSIQVAKKLIPIEAESLDFTIRGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYISTIVNGRYVRNYVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS------------------------- 334 HPAK +RF + I +++Q A K + Sbjct: 299 HPAKLEVRFSKEQELLQLIEKTLQDAFKKIQLIPDAGVTSKKKEKDESVQEQFHFEHTKP 358 Query: 335 ----------SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 + K L + E L +EN + + Sbjct: 359 KEVPLPNIVLPTGMDEKQEEIQAKPQNKNLLWQPPKQEWQPPESLVKEENSWQLSKSMIG 418 Query: 385 DDPTYSEDNDPVEES--------------EATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 + D EE Q+H YI +Q GL ++D Sbjct: 419 KSVQDGNEWDNSEEDFELEEVAEIQEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGLYMID 478 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAA ER+ +E R Q LL P IDL E + E E++ ++G+ E+F Sbjct: 479 QHAAQERINYEYFRDKVGQVTREVQELLVPYRIDLSLTEFLRVEEQLEEVKKVGLFLEQF 538 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 G + +R P K +++ +++ +++ ++ E M+C SI++ + Sbjct: 539 GHQSFIVRSHPTWFPKGQEIEIIDEMMQQVVKLKKVD-IKKLREEAAIMMSCKASIKANQ 597 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 YLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 641 >gi|326389402|ref|ZP_08210969.1| DNA mismatch repair protein MutL [Thermoanaerobacter ethanolicus JW 200] gi|325994407|gb|EGD52832.1| DNA mismatch repair protein MutL [Thermoanaerobacter ethanolicus JW 200] Length = 616 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 198/618 (32%), Positives = 321/618 (51%), Gaps = 31/618 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L EK IN+I+AGE++ERP+ +KELIENS+DA S + I GG + +++D+G Sbjct: 3 KIHLLDEKTINKISAGEVVERPASIVKELIENSIDAGSKNITVEILEGGIPYIKVSDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + +A +RH TSKI D +I T GFRGEAL SI AVSH+TL ++ G Sbjct: 63 GMNEIDAILAFERHATSKIKSDNDLYSIGTLGFRGEALASIAAVSHVTLQTKEEGALFGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G K+ G +EVRD+FF PAR FLK E ITDV+ ++ +++ Sbjct: 123 KVVVEGGKVIEKTTCGCAKGCSIEVRDVFFNTPARRKFLKRPSTEAMYITDVVTKLCLSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + ++ S NGN + I ++ G + ++ + + +S ++ L+ G Sbjct: 183 PEVSFKYVKDRKLQF---ITSGNGNIEDVILRLFGNEVYSSLMSASFESEDLKLKILAGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N N N + ++NGR V++K + + I A+ IP+ RYP V L +EIDPRQ+DVN+ Sbjct: 240 NSLNYSNRNMQFFYVNGRYVKNKTLTAAIDEAFKTYIPVNRYPAVFLYMEIDPRQIDVNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-SVLSKKMISSFHQDNAPKTHLPKY 358 HP+K I+F + I + ++I+ +++K + + KK I Y Sbjct: 300 HPSKLEIKFSDERRIFEAVYKTIKDSLHKYNLIPEVKIEEKKNIFEIETPTISAEQTKLY 359 Query: 359 ATSLTNTQ-------------EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 TS + +FL++N L N S D + + E E Sbjct: 360 LTSSDKELEEEKKKFDNELKGKNVFLKDNVLKENSKNSSLDNHLAVYEEYEYEYEKEEVN 419 Query: 406 LG---------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 + YII + D I+DQHAAHER+++EK + KI ++ Sbjct: 420 KNDLAKKISDIRIVGTLFSTYIIVEKEDVFYIIDQHAAHERILYEKFTSQYE--KIQTRQ 477 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 + P +++L G+ L+ + E L++LG E FG N+I +RE+P IL + QL DI Sbjct: 478 VTFPIVVELQPGDLELVNQEKELLNKLGYAFEEFGNNSIILREVPVILGQPEARQLFIDI 537 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 ++++ D + + ENI+ MAC ++++ + E+ +L +++ N C HG Sbjct: 538 VEKLKDKELINKISLKEENII-MMACKAAVKAMDNLSEREIYKLFEDLKITENPYTCPHG 596 Query: 577 RPTFIKLKLSDIEKLFGR 594 RP I + + +EK+F R Sbjct: 597 RPVIIAITKTQLEKMFKR 614 >gi|75760973|ref|ZP_00740979.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228902271|ref|ZP_04066431.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 4222] gi|74491537|gb|EAO54747.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228857386|gb|EEN01886.1| DNA mismatch repair protein mutL [Bacillus thuringiensis IBL 4222] Length = 654 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 186/655 (28%), Positives = 298/655 (45%), Gaps = 67/655 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T+ GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTITGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---VLSKKMISSFHQDNAPKTHLP 356 HPAK +RF + I +++Q A K + + K+ S + + P Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 357 KYATSLT---------NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE---------- 397 K + +E L +++ P E P Sbjct: 359 KEPSMPDIVLPTGMDEKQEEPLPVKQPAQLWQPPKQEWQPPKQEWQPPQSLVREEQSWQP 418 Query: 398 --------------------------------------ESEATHYQLGIACAQIHQNYII 419 E Q+H YI Sbjct: 419 STRPIMEEPIREEKSWDSNEEDFELEELEEEVQEIKEIEMNGNDLPPLYPIGQMHGTYIF 478 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 +Q GL ++DQHAA ER+ +E R Q LL P IDL E + E E+ Sbjct: 479 AQNDKGLYMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEE 538 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L ++G+ E+FG + +R P K +++ +++++++ ++ E Sbjct: 539 LKKVGLFLEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIM 597 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C SI++ + + + ++ LL E+ N C HGRP + ++EK+F R Sbjct: 598 MSCKASIKANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 652 >gi|326791329|ref|YP_004309150.1| DNA mismatch repair protein MutL [Clostridium lentocellum DSM 5427] gi|326542093|gb|ADZ83952.1| DNA mismatch repair protein MutL [Clostridium lentocellum DSM 5427] Length = 663 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 197/666 (29%), Positives = 326/666 (48%), Gaps = 76/666 (11%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M+ I+ L IN+IAAGE++ERP +KEL+ENS+DA++S + I GG ++TDN Sbjct: 1 MRAIKILDTHTINKIAAGEVVERPCSVVKELVENSIDAKASSITVEIKNGGIDLIRVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +++ +A RH TSKI ++D + + GFRGEAL SI AVS++ L+++ Q T Sbjct: 61 GVGIPKDQVEVAFLRHATSKITSAEDLYEVISLGFRGEALASIAAVSNVELLTKEEQELT 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G +I ISG K+S+ VA GT +R LFF +PAR FL S E I+D + ++A+ Sbjct: 121 GKRIEISGGKMSAAEEVACPNGTTFIMRHLFFNVPARKAFLSSSSSEGAKISDYMYKLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P+VSF + + S + I + G+++ N +E KS+ I G Sbjct: 181 AHPEVSFKYIQNGKTIFT---TSGDHELKHAILNIYGKEYARNTLECYYKSDTIECMGLI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P NRGN N + FINGR ++ + + + AY + +G++P VL L +DP VDV Sbjct: 238 GKPVLNRGNRNYEHFFINGRYIKSQLLQGAVEDAYKTLVMVGKFPFSVLHLYLDPSLVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-------------SSVLSKKMISS 344 NVHP K +RF+NP I + + + A+ + + V+ + +I + Sbjct: 298 NVHPTKLQVRFKNPDTIYKAVYEGVSHALREAYLVPQVATEPGPKEAKVEPVIEQGIIDT 357 Query: 345 FHQDNAPKTHL-------------------PKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 F K + P + L ++ + + T + S Sbjct: 358 FFAPRKEKEEVTPQSLLKHNPTDFQREDVNPPSISRLFGNRDSHHVSPQSIDTYEKQLSQ 417 Query: 386 --------DPTYSEDNDPVEESEATHYQLG-----------------------------I 408 T ++ + E E + + G Sbjct: 418 VFKEEMIHQSTTEPTDEMIHELEKPNKEYGISRFEDVPLPPKIQVEEKPTSPAILPTDYR 477 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 Q+ + Y + + + + I+DQHAAHER+++E+ +F + ++ +Q LL PE + + Sbjct: 478 IVGQVFKTYWLIEYHEKVFIIDQHAAHERVLYEQFMAEFKANEVATQLLLMPETLMVTPV 537 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 E L+ EH+E +LG + E FG NA+AIRE+P IL++ P + ++++D + Sbjct: 538 EMTLLNEHEELFKKLGFQFEAFGENAVAIREVPFILNEPLSPAVFKEVLDRLT-HDKLQD 596 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 + + + M+C +I++ ++ E +L+ + N C HGRPT + L DI Sbjct: 597 IAELKAEAIIRMSCRSAIKAHDQISDRECRKLIELLLALDNPFTCPHGRPTLVALTQVDI 656 Query: 589 EKLFGR 594 EK+F R Sbjct: 657 EKMFKR 662 >gi|47092694|ref|ZP_00230480.1| DNA mismatch repair protein MutL [Listeria monocytogenes str. 4b H7858] gi|47018882|gb|EAL09629.1| DNA mismatch repair protein MutL [Listeria monocytogenes str. 4b H7858] Length = 602 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 188/601 (31%), Positives = 299/601 (49%), Gaps = 14/601 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL + + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLEMETST-GEAKGTT 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G +V + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGVSIAKKSVPVKAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +R + I Q I++ +K + +SKK + + Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKETFHKLQLIPDGEISKKQKEDQKSEQIQMSFEENKPV 360 Query: 361 SLTNT-QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE-----ESEATHYQLGIACAQIH 414 T T K + E S D DD + + + + Sbjct: 361 KETPTLFSKPTIPEYVPSDEDAPREDDFILKQCRPMNQNLKRSKKSIRRNVFLKCIQWSN 420 Query: 415 -QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 N +Q +GL I+DQHAA ER+ +E R+ Q LL P +++ E + Sbjct: 421 ACNLYFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELLVPIVLEFPADEYVRL 480 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 E L +G+ E FG N+ IR P K ++LR+IIDE + + + ++ Sbjct: 481 EEQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREIIDEALSAP-SISIHKLR 539 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E+ M+C SI++ + + +M LL + + + C HGRP I+ ++EK+F Sbjct: 540 EDTAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMFK 599 Query: 594 R 594 R Sbjct: 600 R 600 >gi|171778536|ref|ZP_02919663.1| hypothetical protein STRINF_00515 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282759|gb|EDT48183.1| hypothetical protein STRINF_00515 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 646 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 177/634 (27%), Positives = 309/634 (48%), Gaps = 45/634 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERP+ +KEL+ENS+DA SS++ I G Q+TDNG Sbjct: 3 KIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEESGLKNIQVTDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ +++ RH TSKI D I T GFRGEA+PSI ++SH T+ + + G Sbjct: 63 GISQEDVALSLHRHATSKIKSQADLFRIRTLGFRGEAIPSIASISHFTVKTATADEHYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I ++ GT + V +LF+ PARL ++KS Q E I DV+ R+++A+ Sbjct: 123 LLVAKGGEIERQEAISTPVGTKITVENLFYNTPARLKYMKSLQSELAHIVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT +M S G+ + I+ + G + +E++ + + GY + Sbjct: 183 PEIAFTLINDGR---QMTTTSGTGDLRQAIAGIYGLNTAKKMIEISNADLDFEVSGYISL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I +I +++ ++ + ++ + S+ +T LP Sbjct: 300 HPTKQEVRISKEKELMGLISSAIAESLREQDLIPDALENLAKSSTRGFSKPQQTSLPLKQ 359 Query: 357 --------------------KYATSLTNTQEKLFLQENRLST----------------ND 380 + L N +K Q ++ S+ +D Sbjct: 360 TNLYYDKERHDFFVKSDTVEEEPAQLFNEVDKAVKQVDKQSSVRYAQRSLAGQAYDEHDD 419 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 L + + + +++ E + + Q+H Y+ +Q GL I+DQHAA ER+ + Sbjct: 420 LDFKNKTKINRMIESLDKEEVSTFPELEYFGQMHGTYLFAQGNGGLYIIDQHAAQERVKY 479 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 E R + Q LL P + + + I E E L ++GI E +G N +RE Sbjct: 480 EYYRDKIGEVDDSLQQLLMPYLFEFSGADFIKIQEKMELLKQVGINLEPYGNNTFILREH 539 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 P + ++ I + ++ D ++ ++ +++ + M+C SI++ + +L Sbjct: 540 PIWMKEEEIETAVYEMCDMLLLTNGV-SVKKYRAELAIMMSCKRSIKANHTLDDYSARQL 598 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + ++ + N C HGRP + SD+EK+F R Sbjct: 599 IVQLSQCKNPYNCPHGRPVLVNFTKSDMEKMFRR 632 >gi|110597213|ref|ZP_01385501.1| DNA mismatch repair protein MutL [Chlorobium ferrooxidans DSM 13031] gi|110341049|gb|EAT59517.1| DNA mismatch repair protein MutL [Chlorobium ferrooxidans DSM 13031] Length = 626 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 187/628 (29%), Positives = 314/628 (50%), Gaps = 40/628 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L + I N+I+AGE+++RP+ +KEL+ENS+DA + ++ + GK +I DNG Sbjct: 3 RIARLPDSIANKISAGEVVQRPASVVKELLENSIDAGADKITLSVKDAGKELIRIVDNGA 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ + V+R TSKI +D ++ T GFRGEAL SI +VSH L +R + G Sbjct: 63 GMLREDALLCVERFATSKIIGVEDLDSLKTLGFRGEALASISSVSHFELKTRTAKETLGL 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G ++ V GT + VR+LF+ +PAR FLKS E I +VI+ A+AY Sbjct: 123 RFRYEGGVLAEESGVQGEQGTTMSVRNLFYNVPARRKFLKSNATEFQHIFEVIKSFALAY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + + ER++ G DF ++ +EL+E+++ ++++G+ G Sbjct: 183 PEIEWRMYNDDEELFHFRTP----EMAERLNFFYGSDFSDSLIELSEENDYLSIRGFLGK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + Y FIN R +Q++ + ++ AY E + + P V+L LEIDP ++DVNV Sbjct: 239 PAMQKRKKLDQYFFINRRVIQNRMLSQAVQQAYGELLVERQAPFVLLFLEIDPSRIDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST--SSVLSKKMISSFHQDNAPK----T 353 HPAK +RF + +RN I++AI S ++ + Q++A + Sbjct: 299 HPAKLEVRFDDERSVRNMFYPVIKRAIQLHDFSPDLAATARDDAFGAPRQESAWRKLSFQ 358 Query: 354 HLPKYATS----LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV------------- 396 +P + + N +E F ++ LL S+ T + Sbjct: 359 DIPDRSMTTGDLYRNYREGAFQHAPETRSSTLLQSELFTGRSGSPAPKSQSELREGDDGL 418 Query: 397 ----------EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 +E + + Q+H Y+I Q GL+I+DQH AHER+++E+ Sbjct: 419 SFALLSPLPGDEGQPNPKEAEPKIWQLHNKYLICQIKTGLMIIDQHVAHERVLYERAVDV 478 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 SQ LL P+ ++ E + E +DL+RLG FG I I +P + Sbjct: 479 MTQNVPNSQQLLFPQKVEFRPWEYEVFEEIRDDLYRLGFNLRLFGNKTIMIEGVPQDVKP 538 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 +L+++I E D+++ L D+ +N+ + +C +I +G+K+ EM L+ + Sbjct: 539 GTEVTILQEMIAEYQDNASRLKL-DKRDNLAKSYSCRNAIMTGQKLNLEEMRTLIDNLFA 597 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP IKL L ++++FGR Sbjct: 598 TRDPYSCPHGRPVIIKLSLDQLDRMFGR 625 >gi|172057082|ref|YP_001813542.1| DNA mismatch repair protein MutL [Exiguobacterium sibiricum 255-15] gi|229486322|sp|B1YMD8|MUTL_EXIS2 RecName: Full=DNA mismatch repair protein mutL gi|171989603|gb|ACB60525.1| DNA mismatch repair protein MutL [Exiguobacterium sibiricum 255-15] Length = 607 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 169/607 (27%), Positives = 290/607 (47%), Gaps = 20/607 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+LS+ + N+IAAGE++ERP+ +KEL+EN+LDA +++V+ + G I DNG G Sbjct: 4 IRELSDSLANRIAAGEVVERPASVVKELVENALDAGATQVDVELEEAGMKRITIRDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 E+ +A RH TSKI D D I T GFRGEAL SI +VS +TL ++ + G Q Sbjct: 64 FYPEDAELAFVRHATSKIKDEHDLFRIKTLGFRGEALASIASVSKVTLKTKREEQE-GIQ 122 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + +++ +AMN GT + V LFF PARL +LK+ E ITD++ R+A A+P Sbjct: 123 LTLDCGRLTDRSAIAMNRGTELTVEQLFFNTPARLKYLKTTHTELAAITDILNRVAFAHP 182 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V + + +G+ + ++ V G I + + + L + P Sbjct: 183 DVKLYAVHEGK---VLIQTNGSGDVRQALASVYGHQTIQGTLVATGTTADYQLTCHLVKP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + N + +NGR+V++ + + Y +P+GR+P+ V+ + +DP +DVNVH Sbjct: 240 EVTRASKNYITLILNGRSVKNFALTQAVLNGYHTLLPIGRFPIAVIEVTMDPLLIDVNVH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +R + I ++I+ ++++ + K Q+ +++ + Sbjct: 300 PAKREVRLSKEAELCQLIQETIRLTLSRQTLIPKVTPQKPKKDPSAQEKLEFSYVAEPVE 359 Query: 361 SLTNTQ-------------EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 L++ + NR+ D + + + Sbjct: 360 ELSSRSVWNYPIPKRTEAGNEHVPSANRIQPPDPSIDMPDEPVPEQTDEPVATGPKFPHL 419 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 Q+H +YI+ DG+ ++DQHAA ER+ +E + F Q LL P ++ Sbjct: 420 DVIGQLHSSYIVCSGADGMYLIDQHAAQERIKYETYKVMFGRPLEQKQQLLLPYTFEIAS 479 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 + + E L +GI+ E FGP + +RE+P + +++++DE + Sbjct: 480 DDMRRMDEVLPLLRDVGIELEAFGPQSFIVREVPTWFPSHRQEETIQELMDEAL-MKRKV 538 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 L+ E+ MAC SI++ + M +L+ ++ K C HGRP I+ + Sbjct: 539 DLETYREDAAIMMACKKSIKANHPLNHEMMRQLIVDLAKTEMPFTCPHGRPVIIEWTTYE 598 Query: 588 IEKLFGR 594 +EKLF R Sbjct: 599 LEKLFKR 605 >gi|16078768|ref|NP_389587.1| DNA mismatch repair protein [Bacillus subtilis subsp. subtilis str. 168] gi|221309580|ref|ZP_03591427.1| DNA mismatch repair protein [Bacillus subtilis subsp. subtilis str. 168] gi|221313904|ref|ZP_03595709.1| DNA mismatch repair protein [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318827|ref|ZP_03600121.1| DNA mismatch repair protein [Bacillus subtilis subsp. subtilis str. JH642] gi|221323099|ref|ZP_03604393.1| DNA mismatch repair protein [Bacillus subtilis subsp. subtilis str. SMY] gi|1709188|sp|P49850|MUTL_BACSU RecName: Full=DNA mismatch repair protein mutL gi|1002521|gb|AAB19236.1| MutL [Bacillus subtilis subsp. subtilis str. 168] gi|2634077|emb|CAB13578.1| DNA mismatch repair factor [Bacillus subtilis subsp. subtilis str. 168] Length = 627 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 182/628 (28%), Positives = 316/628 (50%), Gaps = 40/628 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K+ +LS+++ N+IAAGE++ERP+ +KEL+EN++DA+S+ +E I G + ++ DNG Sbjct: 3 KVIQLSDELSNKIAAGEVVERPASVVKELVENAIDADSTVIEIDIEEAGLASIRVLDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +E+ A +RH TSKI D D + T GFRGEALPSI +VSHL + + G Sbjct: 63 GMENEDCKRAFRRHATSKIKDENDLFRVRTLGFRGEALPSIASVSHLEITTST-GEGAGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G I S + GT + V +LFF PARL ++K+ E ITDV+ R+A+A+ Sbjct: 122 KLVLQGGNIISESRSSSRKGTEIVVSNLFFNTPARLKYMKTVHTELGNITDVVNRIALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + + NG+ ++ + G + L+ S + ++GY + Sbjct: 182 PEVSIRLRHHGK---NLLQTNGNGDVRHVLAAIYGTAVAKKMLPLHVSSLDFEVKGYIAL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR +++ ++ + Y +P+GR+P+ + + +DP VDVNV Sbjct: 239 PEITRASRNYMSSVVNGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA--------P 351 HP+K +R T + + I I+ ++ + S+ + KK + + P Sbjct: 299 HPSKLEVRLSKETELHDLIRDGIKDVFKQQQLIPSAQVPKKSAPAIKNEQQFITFDEKPP 358 Query: 352 KTHLPKYATSLTNTQEKLFL------------------------QENRLSTNDLLPSDDP 387 + +P+ +T+ + + KL QE L +D+ Sbjct: 359 EKKVPEKSTAPSYSPMKLSSVVKEPVDAEEKLPPLQFDAPPIVDQEQTLEVSDVSAEQPE 418 Query: 388 TY-SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 T+ E ++ + + + Q+H YI++Q +GL I+DQHAA ER+ +E R+ Sbjct: 419 TFEQECHEEQPQPASDRVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREK 478 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 + Q ++ P E +I +H ++L +G+ E FG N+ +R PA K Sbjct: 479 VGEVEPEVQEMIVPLTFHYSTNEALIIEQHKQELESVGVFLESFGSNSYIVRCHPAWFPK 538 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 +L+ +II +++DS ++ E M+C GSI++ R +++ E+ LL ++ Sbjct: 539 GEEAELIEEIIQQVLDSKNID-IKKLREEAAIMMSCKGSIKANRHLRNDEIKALLDDLRS 597 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP I ++EK+F R Sbjct: 598 TSDPFTCPHGRPIIIHHSTYEMEKMFKR 625 >gi|116513153|ref|YP_812060.1| DNA mismatch repair protein [Lactococcus lactis subsp. cremoris SK11] gi|123025082|sp|Q02VS5|MUTL_LACLS RecName: Full=DNA mismatch repair protein mutL gi|116108807|gb|ABJ73947.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. cremoris SK11] Length = 656 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 198/642 (30%), Positives = 326/642 (50%), Gaps = 53/642 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L+E + NQIAAGE++ERP+ +KEL+ENS+DA SS++ + G ++TDNG Sbjct: 3 KIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKITVSVEEAGLRLIEVTDNGL 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A++RH TSKI D D I T GFRGEALPSI +VS +T+ + Q G Sbjct: 63 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSNAQEEAGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G I ++ P+A GT + V +LF+ PARL ++KS Q E + ITD+I R+++A+ Sbjct: 123 KLIAKGGTIETLEPLAKRLGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SFT K + NG+ + I+ + G E+N + L GY + Sbjct: 183 PEISFTLVNEGKEFLK---TAGNGDLRQVIAAIYGIGTAKKMREINGSDLDFELTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P VL ++IDP+ DVNV Sbjct: 240 PELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAVLSIKIDPKLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I ++I +A+++ + ++ + + + + +T LP Sbjct: 300 HPTKQEVRLSKERELMTLISKAIDEALSEGVLIPEALENLQGRVKEKETVSVQTELPLQN 359 Query: 360 TSL--TNTQEKLFLQE------NRLSTNDLLPSDDPTYSEDN------------------ 393 L N ++ F++E N+ +D L + T N Sbjct: 360 NPLYYDNVRQDFFVREEAIFEINKNDNSDSLTEQNSTDYTVNQPETGSVSEKITDRTVES 419 Query: 394 --------------------DPVEE-SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 D +E+ S+ + + AQ+H Y++ Q+ +GL +VDQH Sbjct: 420 SNEFTDRTPKNSVSNFGVDFDNIEKLSQQSTFPQLEYLAQLHATYLLCQSKEGLYLVDQH 479 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AA ER+ +E + + Q LL P + L + + ++ E + LH G+ E +G Sbjct: 480 AAQERIKYEYWKDKIGEVSMEQQILLAPYLFTLPKNDFIVLAEKKDLLHEAGVFLEEYGE 539 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 N +RE P L + I + + ++ID I+ SS ++L+ ++ A +AC SI++ + Sbjct: 540 NQFILREHPIWLKETEIEKSINEMIDIIL-SSKEFSLKKYRHDLAAMVACKSSIKANHPL 598 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LLRE+ N C HGRPT + DI+K+F R Sbjct: 599 DAESARALLRELATCKNPYSCAHGRPTIVHFSGDDIQKMFRR 640 >gi|300855301|ref|YP_003780285.1| putative DNA mismatch repair protein MutL [Clostridium ljungdahlii DSM 13528] gi|300435416|gb|ADK15183.1| predicted DNA mismatch repair protein MutL [Clostridium ljungdahlii DSM 13528] Length = 610 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 200/610 (32%), Positives = 323/610 (52%), Gaps = 22/610 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E N+IAAGE++E PS IKEL+ENS+D+ + + I GG+ +I D+G+ Sbjct: 4 RINLLDENTSNKIAAGEVVEGPSSVIKELLENSIDSGAKNITIEIEEGGEKSIKIIDDGW 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +I A H TSKIS +D I T GFRGEAL SI +VS+ L S+ + G Sbjct: 64 GIHPLDIKKAFMPHATSKISTVEDLDKISTLGFRGEALCSIASVSNTILKSKAEGFDVGN 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I ISG + + + N GT + V DLFF +PAR FLKS E I+D++ R+++A Sbjct: 124 EIIISGGVLKETQEIGCNKGTTILVEDLFFNVPARKKFLKSPSREAAGISDIVTRLSLAN 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF F K G + I V G++ N + + + S+ I++ GY G Sbjct: 184 PNISFKFFKNGK---KALTTYGTGKVMDVIRCVYGKNIYENIIPVEKHSDIISICGYIGN 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 +RG+ N +FIN R V++K I S A+ + + ++P +L ++I P VDVNV Sbjct: 241 SEISRGSRNNQSIFINKRYVKNKSITSAAEQAFKSFLTINKFPFFILFIDIFPEFVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK ++F + ++ F+ +I +A+ + + S + K + + + Sbjct: 301 HPAKWEVKFSDSRMVFKFVFDAIHEALRE-SLKDSFTIDLKEDDLKPKKTETEIKEVQIP 359 Query: 360 TSLTNTQEKLFLQENRLS----------TNDLLPSDDPTYSEDNDPV-----EESEATHY 404 L + E +++++N S N+ + +++ + V EE + Sbjct: 360 IDLKSPNEGIYIEKNGSSLFKKSKENSNKNEFIKEPKVSFTAKENAVSKNKQEEPRVAKF 419 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 Q Q H YII++ + L ++DQHAAHE+++FEK ++ + SQ L+TP I++ Sbjct: 420 QPLRIIGQFHSTYIIAEDSSNLYMIDQHAAHEKILFEKYKKSIQKGMVLSQVLITPVIME 479 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L + +E+ + + G E FG N I+IRE+P IL K ++ L DI+D + + Sbjct: 480 LTIKDYNCFIENRDLFKKTGFNVELFGNNTISIREVPMILGKPDMKNLFMDILDNLKNMG 539 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 + T + + + LAT+AC +I++ + IEMN L+ E+ + C HGRPT IKL Sbjct: 540 SGDTWEVKYLS-LATLACKAAIKANASISEIEMNHLIEELRFIDDPFNCPHGRPTIIKLT 598 Query: 585 LSDIEKLFGR 594 L+D+EK F R Sbjct: 599 LNDLEKKFKR 608 >gi|239630090|ref|ZP_04673121.1| DNA mismatch repair protein mutL [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527702|gb|EEQ66703.1| DNA mismatch repair protein mutL [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 651 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 174/642 (27%), Positives = 309/642 (48%), Gaps = 54/642 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS + NQIAAGE+IERP+ +KEL+ENS+DA++++++ +I+ G +++DNG Sbjct: 3 KIHQLSATLSNQIAAGEVIERPASVVKELVENSIDAQATQIDVLISAAGLQEIRVSDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A RH TSKI + D N+H+ GFRGEAL SI AV+ + L + + G Sbjct: 63 GIAPDDVATAFLRHATSKILTTRDLFNVHSLGFRGEALASIAAVADVKLTTAT-DSGIGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G ++ + A GT VEV DLFF PARL ++KS+Q E I D++ R+A+A Sbjct: 122 QIHVKGGEVEAQSTAAHRRGTDVEVNDLFFNTPARLKYMKSQQTELGKIVDIVSRLAMAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++FT S + + + G+ + ++ + G + V+ + + + G T + Sbjct: 182 PDIAFTVSHDGNMVVR---TAGQGDLRQTLAGIYGLSVARSMVDFKAQDLDFRVSGLTSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR +++ + + Y + +GRYP+ V+ +E+D VDVNV Sbjct: 239 PETTRASRNYLSLVVNGRYIKNFQLTKAVIAGYGSKLMVGRYPMGVINIEMDAALVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV--------------------LSK 339 HP K+ +R + + + ++I+ + K+ + ++ +S Sbjct: 299 HPTKAEVRLSKEDQLSHLLSEAIRTRLAKENLIPDALDNLPKRERYDLDQLELTLNKISP 358 Query: 340 KMISSFHQDNAPK-----------THLPKYATSLTNTQ--------EKLFLQENRLSTND 380 K + S + T + + T+ + +F + RL+ D Sbjct: 359 KTMPSVQPQQGQQLRENTTTNLADTAAEEPTPAPTSPDLEIGDLDDQPIFNEPQRLAAWD 418 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQ--------LGIACAQIHQNYIISQTTDGLVIVDQH 432 + +E E AQ+H Y+++++ DGL I+DQH Sbjct: 419 QRYQRLASNVVPTLMADEPEPDISHVESAERFPNLTYLAQVHGTYLLAESGDGLYILDQH 478 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AA ER+ +E RQ Q LL P ++D + I +H + L +G+ E FG Sbjct: 479 AAQERVNYEYYRQAIGEVSNDQQHLLVPIVLDYSAADAISIRDHRDVLESVGLYLEDFGQ 538 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 N+ + P +++++D ++ T+ E M+C +I++ + Sbjct: 539 NSFVVEHHPTWFKAGQEEDTIKEMVDWVLRDGR-MTVAAFREKTAIMMSCKRAIKANHHL 597 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL+++ + N C HGRP + +D+EK+F R Sbjct: 598 DDRQARALLQKLPECENPFNCPHGRPVLVHFSNTDLEKMFKR 639 >gi|288906382|ref|YP_003431604.1| DNA mismatch repair protein mutL [Streptococcus gallolyticus UCN34] gi|325979396|ref|YP_004289112.1| DNA mismatch repair protein mutL [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288733108|emb|CBI14689.1| DNA mismatch repair protein mutL [Streptococcus gallolyticus UCN34] gi|325179324|emb|CBZ49368.1| DNA mismatch repair protein mutL [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 647 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 175/635 (27%), Positives = 311/635 (48%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERP+ +KEL+ENS+DA SS++ I G Q+TDNG Sbjct: 3 KIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEEAGLKKIQVTDNGK 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +++ RH TSKI + D I T GFRGEA+PSI ++SH T+ + N G Sbjct: 63 GIAQDDVALSLHRHATSKIKNQADLFRIRTLGFRGEAIPSIASISHFTVKTATADENYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P++ GT + V +LF+ PARL ++KS Q E I DV+ R+++A+ Sbjct: 123 LLVAKGGEIEKQEPISTPVGTKITVENLFYNTPARLKYMKSLQSELAHIVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F+ +M S G+ + I+ + G + +E++ + + GY + Sbjct: 183 PEVAFSLINDGR---QMTTTSGTGDLRQAIAGIYGLNTAKKMIEISNADLDFEVSGYISL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + + I +I +++ ++ + ++ + S+ +T LP Sbjct: 300 HPTKQEVRISKEKELMSLISSAIAESLREQDLIPDALENLAKSSTRGLPKPEQTSLPLKQ 359 Query: 360 TSLTNTQEKL-----------------------------------FLQENRLSTNDLLPS 384 T L +E+ + Q + + + D Sbjct: 360 TDLYYDKERRDFFVKSDTVEEQPVQLFNEVDNSVKEVDKQQTSVKYAQRSEVDSQDDEHD 419 Query: 385 -----DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 + ++ + ++ E++ + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 NLDFKNKTKINKMIESLDNEESSTFPELDYFGQMHGTYLFAQGNGGLYIIDQHAAQERVK 479 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P + + + + E E L+++GI E +G N +RE Sbjct: 480 YEYYREKIGDVDSSLQQLLMPYLFEFSGADFIKLQEKMELLNQVGIYLEPYGNNTFILRE 539 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P + ++ I + ++ D ++ ++ +++ + M+C SI++ + Sbjct: 540 HPIWMKEEEIETAVYEMCDMLLLTNEV-SVKKYRAELAIMMSCKRSIKANHILDDYSARH 598 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + +D+EK+F R Sbjct: 599 LLVQLSQCKNPYNCPHGRPVLVNFTKADMEKMFRR 633 >gi|206972646|ref|ZP_03233588.1| DNA mismatch repair protein MutL [Bacillus cereus AH1134] gi|206732459|gb|EDZ49639.1| DNA mismatch repair protein MutL [Bacillus cereus AH1134] Length = 647 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 186/648 (28%), Positives = 302/648 (46%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL +++ N IAAGE++ERP+ +KEL+ENS+DA S+ +E + G S +I DNG Sbjct: 3 KIRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A +RH TSKI D D I T GFRGEALPSI +VS L L++ G Sbjct: 63 GIAEEDCIVAFERHATSKIKDENDLFRIRTLGFRGEALPSIASVSELELITSTGDAP-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I A GT + V++LFF PARL ++K+ E ITD++ R+A+++ Sbjct: 122 HLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLKYMKTIHTELGNITDIVYRIAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + K+ S NG+ + ++ + V + +S + T++GY + Sbjct: 182 PEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQVAKKLVPIEAESLDFTIKGYVTL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V++ ++ I+ Y +P+GRYP+ L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK +RF + I +++Q A K + + ++ K Sbjct: 299 HPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGVTTKKKEKDESVQEQFQFEHAKP 358 Query: 342 ------------------------------ISSFHQDNAPKTHL----PKYATSLTNTQE 367 Q+ P L + S E Sbjct: 359 KEPSMPDIVLPTGMDAKQEEPQAVKQPPQLWQPPKQEWQPPQSLIREEQSWQPSTKPIIE 418 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +E +N+ + E + E E Q+H YI +Q GL Sbjct: 419 EPIQEEKSWDSNEEDFELEELEEEVREIKEIEMNGNDLPPLYPIGQMHGTYIFAQNDKGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ER+ +E R Q LL P IDL E + E E+L ++G+ Sbjct: 479 YMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRIDLSLTEFLRVEEQLEELKKVGLF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E+FG + +R P K +++ +++++++ ++ E M+C SI Sbjct: 539 LEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKLKKVD-IKKLREEAAIMMSCKASI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + + + ++ L+ E+ N C HGRP + ++EK+F R Sbjct: 598 KANQYLTNDQIFALMEELRTTTNPYTCPHGRPILVHHSTYELEKMFKR 645 >gi|296284037|ref|ZP_06862035.1| DNA mismatch repair protein [Citromicrobium bathyomarinum JL354] Length = 590 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 227/591 (38%), Positives = 346/591 (58%), Gaps = 19/591 (3%) Query: 20 IERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 IERP+ A+KEL+EN++D+ ++R+ + GG ++ D+G GM+ EE+ +A++RH TSK Sbjct: 2 IERPAAALKELVENAIDSGATRITVSLEDGGIGAIEVVDDGCGMSPEEMALALERHATSK 61 Query: 80 ISDD-------FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVR 132 + +D + T GFRGEALPSI +V+ TL SRP ++G + + ++ + Sbjct: 62 LPEDLVGEGHALEQVATLGFRGEALPSIASVARFTLESRPHNADSGWRRVVDHGRVVEDK 121 Query: 133 PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSN 192 P A+ PGT + D F +PAR FL++ + E D++RR+A+A P + FTFS Sbjct: 122 PSAVPPGTRARIEDFFREVPARRKFLRTPRSEFAACQDIVRRLAMARPDIGFTFSNNGRR 181 Query: 193 RYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYV 252 ++ PER+ +++ D +N V ++ E+TL G G+PT+NRG A+ Y+ Sbjct: 182 SLQLQRGEA---LPERVVRLVSRDLKDNCVPIDLARGEMTLTGIAGLPTYNRGVADHQYL 238 Query: 253 FINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPT 312 F+NGR V+D+ ++ +R AYAE + R+ V+ L L++ P VDVNVHPAKS +RFR+P Sbjct: 239 FVNGRPVKDRLLVGAVRGAYAEMLARDRHAVLALFLDLPPEDVDVNVHPAKSEVRFRDPQ 298 Query: 313 IIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKTHLPKYATSLT-NTQEKLF 370 +R I+ ++ A++ ++ ++ + + AP+ + Sbjct: 299 GVRGMIVGGLRAALSTGDKRSAQAPDASAMAKWQAEPVAPEPPAASIFDRFAGGSASATA 358 Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 LQE R+ +D P + EA Y LGIA QI YI+++ DGLV+V Sbjct: 359 LQEPRMDWRAQQAADAPPSGRAEEAAPLPQEARDYPLGIARGQIANTYIVAEAADGLVLV 418 Query: 430 DQHAAHERLIFEKMRQ-DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 DQHAAHERL E++R D S SQ LL PE+++L E EC + DL R+G+ E Sbjct: 419 DQHAAHERLTLERLRSADAGSATARSQALLMPEVVELSEAECDRLEGIAADLDRMGLAIE 478 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS-----STTYTLQDRIENILATMACY 543 RFGP A+ +R +P L K + LLRDI D++ + + L ++IE +LATMAC+ Sbjct: 479 RFGPAAMLVRSLPHALPKADPHALLRDIADDLATNGVDGEGGSLLLTEKIEYVLATMACH 538 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 GS+R+GR ++ EMN LLREME+ P S QCNHGRPT++KL + ++EKLFGR Sbjct: 539 GSVRAGRTLRVEEMNALLREMERTPRSGQCNHGRPTWVKLSMEEVEKLFGR 589 >gi|306832429|ref|ZP_07465582.1| DNA mismatch repair protein HexB [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425469|gb|EFM28588.1| DNA mismatch repair protein HexB [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 647 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 175/635 (27%), Positives = 311/635 (48%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERP+ +KEL+ENS+DA SS++ I G Q+TDNG Sbjct: 3 KIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEEAGLKKIQVTDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +++ RH TSKI + D I T GFRGEA+PSI ++SH T+ + N G Sbjct: 63 GIAQDDVALSLHRHATSKIKNQADLFRIRTLGFRGEAIPSIASISHFTVKTATADENYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P++ GT + V +LF+ PARL ++KS Q E I DV+ R+++A+ Sbjct: 123 LLVAKGGEIEKQEPISTPVGTKITVENLFYNTPARLKYMKSLQSELAHIVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F+ +M S G+ + I+ + G + +E++ + + GY + Sbjct: 183 PEVAFSLINDGR---QMTTTSGTGDLRQAIAGIYGLNTAKKMIEISNADLDFEVSGYISL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + + I +I +++ ++ + ++ + S+ +T LP Sbjct: 300 HPTKQEVRISKEKELMSLISSAIAESLREQDLIPDALENLAKSSTRGLPKPEQTSLPLKQ 359 Query: 360 TSLTNTQEKL-----------------------------------FLQENRLSTNDLLPS 384 T L +E+ + Q + + + D Sbjct: 360 TDLYYDKERRDFFVKSDTVEEQPVQLFNEVDNSVKEVDKQQTSVKYAQRSEVDSQDDEHD 419 Query: 385 -----DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 + ++ + ++ E++ + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 NLDFKNKTKINKMIESLDNEESSTFPELDYFGQMHGTYLFAQGNGGLYIIDQHAAQERVK 479 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P + + + + E E L+++GI E +G N +RE Sbjct: 480 YEYYREKIGDVDSSLQQLLMPYLFEFSGADFIKLQEKMELLNQVGIYLEPYGNNTFILRE 539 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P + ++ I + ++ D ++ ++ +++ + M+C SI++ + Sbjct: 540 HPIWMKEEEIETAVYEMCDMLLLTNEV-SVKKYRAELAIMMSCKRSIKANHILDDYSARH 598 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + +D+EK+F R Sbjct: 599 LLVQLSQCKNPYNCPHGRPVLVNFTKADMEKMFRR 633 >gi|81427977|ref|YP_394976.1| DNA mismatch repair protein [Lactobacillus sakei subsp. sakei 23K] gi|78609618|emb|CAI54664.1| DNA mismatch repair protein MutL [Lactobacillus sakei subsp. sakei 23K] Length = 653 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 177/644 (27%), Positives = 296/644 (45%), Gaps = 56/644 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+EN++DA S++V+ V+ G Q+ DNG Sbjct: 4 KIHELSEILSNQIAAGEVIERPASVVKELVENAIDANSTQVDIVVEQAGLQMIQVIDNGD 63 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A +RH TSKI+ D I + GFRGEAL SI +VS LT+ + + G Sbjct: 64 GIEPEDVPVAFKRHATSKIATRQDLFKIQSLGFRGEALASIASVSDLTIETATADS-LGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G + + + PGT + VRDLFF PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 FAHFKGGLLEEQKTNPIRPGTAITVRDLFFNTPARLKYVKTFQTELANIVDIVNRLAMSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT + + + N + + I+ + G + ++ + L GY + Sbjct: 183 PQIAFTLTNDGHL---LLKTAGNNDLKQTIAGIYGVTMAKKLLAVSASDLDFKLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N + INGR +++ + I Y + +GRYP+ VL +E+DP +DVNV Sbjct: 240 PELTRATRNYLSILINGRFIKNYQLNKAIIKGYGSKLMVGRYPIAVLAIEMDPLLIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS------------------------ 335 HP K +R T + I +I++ + + + + Sbjct: 300 HPTKQEVRLSKETALMTLIEGAIKERLATENLIPDAMQNLKRTKTVDVDQLQMNLNQITQ 359 Query: 336 ---------------VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTND 380 + K ++ + P + LF Q L+ D Sbjct: 360 ERRHPSGTVRPVSPMPIPVKTVTPEIAETETPLAAPTAKAPAITPERPLFEQPQALAEWD 419 Query: 381 LLPSDDPTYSEDNDPVEE----------SEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 + + D V + + Q+H +++++ DG I+D Sbjct: 420 QKYATEAVGKPFGDQVVDETDESEENVVEPTVRFPELRYIGQLHSTFLLAEGEDGFYILD 479 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAA ER+ +E R+ + Q LL P +++ + I E E L +GI+ E F Sbjct: 480 QHAAQERIKYEYYREKIGEVSTSVQNLLVPLVLEYPNSDALKIQEKTELLASVGIQLENF 539 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 G N+ + P + + +R +ID+++ ++ E M+C SI++ Sbjct: 540 GQNSFVVHSHPTWIGQGQEEMTIRGMIDDVLKDGRI-SIAQFREKTAIMMSCKQSIKAHH 598 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + LL ++ K N C HGRP I D+EK+F R Sbjct: 599 HLDDAQAKALLADLAKTENPFNCPHGRPVLIHYTQKDLEKMFKR 642 >gi|291519453|emb|CBK74674.1| DNA mismatch repair protein MutL [Butyrivibrio fibrisolvens 16/4] Length = 632 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 177/632 (28%), Positives = 296/632 (46%), Gaps = 43/632 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI LS++ I++IAAGE++ERP+ KELIENS+DA ++ + I GGG + +ITDNG Sbjct: 3 KINLLSQETIDKIAAGEVVERPASVAKELIENSIDAGATAISVEIKGGGIEYLRITDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A RH TSKIS D N+ + GFRGEAL SI AVS + L+++ + GA Sbjct: 63 GIDKDQIQIAFLRHSTSKISSAVDLDNVRSLGFRGEALSSISAVSKVELITKTKDSLLGA 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I G K S+ V GT VR LF+ PAR FLKSE E + + DV+ +A+++ Sbjct: 123 SYIIEGAKEISLTDVGAPDGTTFIVRQLFYNTPARKKFLKSESTEGSYVFDVVEHLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF F + S NG + I Q+ G +N +++ ++++ G+ G Sbjct: 183 PEISFKFLVNGKEKLM---TSGNGTLSDTIYQIYGRQIASNVLDIEYVDEKVSITGFIGQ 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 RGN + F+N R ++ + Y + +YP V+ + VDVNV Sbjct: 240 SVIARGNRAFEHFFVNSRYIKSNNLSRACEEGYYGFLMGHQYPFFVINIAFTDSAVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN-----------KKGISTSSVLSKKMIS--SFH 346 HP K +RF N + + + ++I + + + I + ++ + +S Sbjct: 300 HPTKQEVRFENESEVCQLLTKTINQRLRRREDVLETHIDEPTIKQAPIIQQPTVSTVPVE 359 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS------DDPTYSEDNDPVEESE 400 + P+T+ ++ T ++ + + T ND E + Sbjct: 360 AEVKPETNYQSIPAQVSATSSEVIPPKPVKTPEPFEKDRLERIKQSITAQIHNDTPYEKK 419 Query: 401 ATHYQLG------------------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 G Q+ Y I + + I+DQHAAHE+++FEK Sbjct: 420 FAEKNRGGEKYEQISFLNKEAVKEHKIIGQVFDTYWIVEYDKNMYIIDQHAAHEKVLFEK 479 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 + ++TSQ + P I+ L + L + E +LG + E FG N +AI IP Sbjct: 480 TMARLKNNQMTSQMISPPVIVSLSPQDVLLFENYREAFEKLGYRVESFGGNELAINGIPG 539 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 L + +++ + + + IE + A+M+C +++ ++ E+ L+ Sbjct: 540 NLLNLDPKAFFLEVLADCQSYKASDSFDMIIERV-ASMSCKAAVKGNNRLSIPEIKTLID 598 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + N C HGRPT I ++ K F R Sbjct: 599 DLLELENPYHCPHGRPTMISFSEYELGKKFKR 630 >gi|228476690|ref|ZP_04061359.1| DNA mismatch repair protein MutL [Streptococcus salivarius SK126] gi|228251639|gb|EEK10736.1| DNA mismatch repair protein MutL [Streptococcus salivarius SK126] Length = 647 Score = 508 bits (1308), Expect = e-141, Method: Composition-based stats. Identities = 177/635 (27%), Positives = 306/635 (48%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE++ERP+ +KEL+EN++DA S+++ + G S QITDNG Sbjct: 3 KIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ M+++RH TSKI + D I T GFRGEALPSI ++S+LT+++ G Sbjct: 63 GMAQADVAMSLRRHATSKIKNQGDLFRIRTLGFRGEALPSIASISYLTIVTAAAGEAYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G KI S P++ GT + V +LF+ PARL ++KS Q E I DV+ R+++A+ Sbjct: 123 KLVAKGGKIESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT ++ S G+ + I+ + G VE++ + + GY + Sbjct: 183 PEVAFTLLNDGR---QLTQISGTGDLRQAIAGIYGLTTAKKMVEISNSDLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAIFDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I +I +++ ++ + ++ + S+ +T LP Sbjct: 300 HPTKQEVRISKEKELMALISSAIAQSLREQDLIPDALENLAKSSTRGATKPVQTSLPLKQ 359 Query: 360 TSL-----------------------------------TNTQEKLFLQENRLSTNDLLPS 384 T+L Q + + + D Sbjct: 360 TNLYYDSSRNDFFVKPETVQEDIKPLISESESPVSSVENKPQPSVKQAQRSVDEGDSEHE 419 Query: 385 -----DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 + + ++ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 KLDYKNKSKMKRMLETLDNEETSTFPELEFFGQMHGTYLFAQGQGGLYIIDQHAAQERVK 479 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P + + + + E L+++GI E +G N +RE Sbjct: 480 YEYYREKIGEVDSSLQQLLVPYLFEFSGSDYISLQEKMSLLNQVGIYLEPYGNNTFILRE 539 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P + ++ I + ++ D ++ ++ +++ + M+C SI++ + Sbjct: 540 HPIWMKEEEIESAVYEMCDMLLLTNEV-SVKTYRAELAIMMSCKRSIKANHALDDYSARD 598 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 599 LLVQLAQCKNPYNCPHGRPVLVNFTKSDMEKMFRR 633 >gi|255525227|ref|ZP_05392169.1| DNA mismatch repair protein MutL [Clostridium carboxidivorans P7] gi|296188727|ref|ZP_06857114.1| DNA mismatch repair protein [Clostridium carboxidivorans P7] gi|255511090|gb|EET87388.1| DNA mismatch repair protein MutL [Clostridium carboxidivorans P7] gi|296046654|gb|EFG86101.1| DNA mismatch repair protein [Clostridium carboxidivorans P7] Length = 633 Score = 508 bits (1308), Expect = e-141, Method: Composition-based stats. Identities = 192/634 (30%), Positives = 323/634 (50%), Gaps = 46/634 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++ L + N+IAAGE++ERP +KEL+ENS+D+ + + GG+ ++ D+G Sbjct: 3 RVNVLDLETSNKIAAGEVVERPFSVVKELVENSIDSGAKNITVETIDGGQKSIKVLDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++I H TSKI +D +I+T GFRGEAL SI +VS+ L SR + + G Sbjct: 63 GIHADDIEKVFMPHATSKIKNIEDVYSINTMGFRGEALASIASVSNTVLRSRAEEFDFGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I+ISG I+ ++ A N GT +EV DLFF +PAR FLKS E+ ITD++ R+++A+ Sbjct: 123 EISISGGNINYIKDAACNLGTTIEVNDLFFNVPARKKFLKSSSRESAYITDILNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 VSF K+ GN + I V G+ +N + ++ +++ GY G Sbjct: 183 SDVSFKLINNGK---KVLTTYGTGNLLDAIRCVYGKTICDNVLTFERHTDIMSIYGYIGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 +RG+ N +F+N R +++K I + + A+ + + +YP VL L+I P +DVNV Sbjct: 240 SEISRGSRNNESIFVNKRYIKNKLITAAVENAFKSFLMINKYPFFVLFLDIFPEYIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS---------------- 343 HP KS I+FR+ I I ++ A+ + ++ +++ + Sbjct: 300 HPTKSEIKFRDDREIFKIIFDTVHAALRDSIKDSFNIPVEEINNDLPDIGDKNKGEDSLT 359 Query: 344 ------------------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENR-----LSTND 380 + PK A + + ++ ++ N+ Sbjct: 360 KDGLGKIENKKDLIQLPIDLNSKWQHNYESPKPAQDKSYIKNQIQEYNSKDFQLCKENNE 419 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 LL D +E+++ E EA + Q H YI++Q D L ++DQHAAHE+++F Sbjct: 420 LLKIDSNCKNENDEKNIEMEA-KFPKLNVIGQFHNTYILAQYGDTLYLIDQHAAHEKILF 478 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 EK + + +Q L+TP II+L + ++ E + G E FG N I+IRE+ Sbjct: 479 EKYKNSIKENDVIAQILITPVIIELYHEDFLYYTDNKEIFSKAGFNIEIFGDNTISIREV 538 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 P IL K ++ L DI++ + + + T + I A +AC +I++ + +IEM+ L Sbjct: 539 PLILGKPDVKNLFMDILENLKNMGSGETWTIKYNAI-AKLACKAAIKANDNLSNIEMDAL 597 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + ++ + C HGRPT IK L+++EK F R Sbjct: 598 VEDLRFIEDPFNCPHGRPTIIKFTLNELEKKFKR 631 >gi|261406194|ref|YP_003242435.1| DNA mismatch repair protein MutL [Paenibacillus sp. Y412MC10] gi|261282657|gb|ACX64628.1| DNA mismatch repair protein MutL [Paenibacillus sp. Y412MC10] Length = 660 Score = 508 bits (1308), Expect = e-141, Method: Composition-based stats. Identities = 174/659 (26%), Positives = 292/659 (44%), Gaps = 71/659 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L E I NQIAAGE++ERP+ +KEL+EN++DA S++++ + GG ++TDNG G Sbjct: 4 IRILDEHIANQIAAGEVVERPASVVKELVENAIDAGSTKIDVSVEEGGLDSIRVTDNGAG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ A RH TSKI++ D I + GFRGEALPSI AVS + L++ Q+ G + Sbjct: 64 IDPEDCETAFYRHATSKIAEGRDLFQITSLGFRGEALPSIAAVSKVRLVTSNAQDGRGRK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G + A GT V++LF+ PARL ++K+ Q E I+D + R+A++ P Sbjct: 124 IEIEGGHLRVNEETAAPRGTDFLVKELFYNTPARLKYMKTIQTELGHISDYMYRLALSRP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++FT + + NG+ + I+ V G + ++ + TL GY P Sbjct: 184 DIAFTLRHNGN---SLLQTLGNGDALQVIAAVYGTQSAKAMLPFAAENMDYTLSGYISRP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + R N N + INGR +++ ++ I Y +P+ R+P+VV+ L + P +DVNVH Sbjct: 241 DYTRANRNGMSLIINGRYIRNYGLMQAILRGYHTLLPINRFPLVVIQLSMHPSLIDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST---------SSVLSKKMISSFHQ---D 348 P+K +RF + F+ + ++K + ++ + S+ + SF Q D Sbjct: 301 PSKLEVRFSKEQELFAFVEEEVRKVLQQEILIPRPAKQNIGKSNNAYIQEQLSFPQAQGD 360 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV------------ 396 + + E+ L T D T + + + Sbjct: 361 VGAARGGQDRDLEIPGSDERSAGGNTPLPTPPAAWPDKQTLATSPNCIKRSYGDGTAETA 420 Query: 397 -----------------------------------------EESEATHYQLGIACAQIHQ 415 E + Q H Sbjct: 421 AASQMRETAASSSYRSDYRNEARGGAGIPAVTKEWLQAVSGPAPEIPPFPELTLIGQHHG 480 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 Y+I+Q GL ++DQHAAHER+ +E + F + SQ LL P ++ E + + Sbjct: 481 TYLIAQNDTGLYLIDQHAAHERINYEYYYEQFGNPADASQELLLPITLEFTPSESEKVKD 540 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 ++G+ E FG + +R P K ++ ++ + +++ + E Sbjct: 541 RLHWFEKVGVYMEFFGGHTFLVRSHPFWFPKGEEKAIIEEMAEWVLNERNID-IAKLRET 599 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C SI++ +K+ E L++ + C HGRP + D+EK+F R Sbjct: 600 SSIMCSCKASIKANQKLTEQEAMTLIQRLGACRQPYTCPHGRPIVVSFSAYDLEKMFKR 658 >gi|306834545|ref|ZP_07467658.1| DNA mismatch repair protein HexB [Streptococcus bovis ATCC 700338] gi|304423347|gb|EFM26500.1| DNA mismatch repair protein HexB [Streptococcus bovis ATCC 700338] Length = 647 Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats. Identities = 175/635 (27%), Positives = 310/635 (48%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERP+ +KEL+ENS+DA SS++ I G Q+TDNG Sbjct: 3 KIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEEAGLKKIQVTDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +++ RH TSKI + D I T GFRGEA+PSI ++SH T+ + N G Sbjct: 63 GIAQDDVALSLHRHATSKIKNQADLFRIRTLGFRGEAIPSIASISHFTVKTATADENYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P++ GT + V +LF+ PARL ++KS Q E I DV+ R+++A+ Sbjct: 123 LLVAKGGEIEKQEPISTPVGTKITVENLFYNTPARLKYMKSLQSELAHIVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F+ +M S G+ + I+ + G + +E++ + + GY + Sbjct: 183 PEVAFSLINDGR---QMTTTSGTGDLRQAIAGIYGLNTAKKMIEISNADLDFEVSGYISL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + + I +I +++ ++ + ++ + S+ +T LP Sbjct: 300 HPTKQEVRISKEKELMSLISSAIAESLREQDLIPDALENLAKSSTRGLPKPEQTSLPLKQ 359 Query: 360 TSLTNTQEKL-----------------------------------FLQENRLSTNDLLPS 384 T L +E+ + Q + + D Sbjct: 360 TDLYYDKERRDFFVKSDTVEEQPVQLFNEVDNSVKEVDKQQTSVKYAQRSEVDNQDDEHD 419 Query: 385 -----DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 + ++ + ++ E++ + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 NLDFKNKTKINKMIESLDNEESSTFPELDYFGQMHGTYLFAQGNGGLYIIDQHAAQERVK 479 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P + + + + E E L+++GI E +G N +RE Sbjct: 480 YEYYREKIGDVDSSLQQLLMPYLFEFSGADFIKLQEKMELLNQVGIYLEPYGNNTFILRE 539 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P + ++ I + ++ D ++ ++ +++ + M+C SI++ + Sbjct: 540 HPIWMKEEEIETAVYEMCDMLLLTNEV-SVKKYRAELAIMMSCKRSIKANHILDDYSARH 598 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + +D+EK+F R Sbjct: 599 LLVQLSQCKNPYNCPHGRPVLVNFTKADMEKMFRR 633 >gi|116495687|ref|YP_807421.1| DNA mismatch repair protein [Lactobacillus casei ATCC 334] gi|301067237|ref|YP_003789260.1| DNA mismatch repair protein [Lactobacillus casei str. Zhang] gi|122262911|sp|Q035Z3|MUTL_LACC3 RecName: Full=DNA mismatch repair protein mutL gi|116105837|gb|ABJ70979.1| DNA mismatch repair protein MutL [Lactobacillus casei ATCC 334] gi|300439644|gb|ADK19410.1| DNA mismatch repair enzyme (predicted ATPase) [Lactobacillus casei str. Zhang] Length = 651 Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats. Identities = 174/642 (27%), Positives = 309/642 (48%), Gaps = 54/642 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS + NQIAAGE+IERP+ +KEL+ENS+DA++++++ +I+ G +++DNG Sbjct: 3 KIHQLSATLSNQIAAGEVIERPASVVKELVENSIDAQATQIDVLISAAGLQEIRVSDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A RH TSKI + D N+H+ GFRGEAL SI AV+ + L + + G Sbjct: 63 GIAPDDVATAFLRHATSKILTTRDLFNVHSLGFRGEALASIAAVADVKLTTAT-DSGIGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G ++ + A GT VEV DLFF PARL ++KS+Q E I D++ R+A+A Sbjct: 122 QIHVKGGEVEAQSTAAHRRGTDVEVNDLFFNTPARLKYMKSQQTELGKIVDIVSRLAMAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++FT S + + + G+ + ++ + G + V+ + + + G T + Sbjct: 182 PDIAFTVSHDGNMVVR---TAGQGDLRQTLAGIYGLSVARSMVDFKAQDLDFRVSGLTSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR +++ + + Y + +GRYP+ V+ +E+D VDVNV Sbjct: 239 PETTRASRNYLSLVVNGRYIKNFQLTKAVIAGYGSKLMVGRYPMGVINIEMDAALVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV--------------------LSK 339 HP K+ +R + + + ++I+ + K+ + ++ +S Sbjct: 299 HPTKAEVRLSKEDQLSHLLSEAIRTRLAKENLIPDALDNLPKRERYDLDQLELTLNKISP 358 Query: 340 KMISSFHQDNAPK-----------THLPKYATSLTNTQ--------EKLFLQENRLSTND 380 K + S + T + + T+ + +F + RL+ D Sbjct: 359 KTMPSVQPQQGQQLRENTTTNLADTAAEEPTPAPTSPDLEIGDLDDQPIFNEPQRLAAWD 418 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQ--------LGIACAQIHQNYIISQTTDGLVIVDQH 432 + +E E AQ+H Y+++++ DGL I+DQH Sbjct: 419 QRYQRLASNVVPTLVADEPEPDISHVESAERFPNLTYLAQVHGTYLLAESGDGLYILDQH 478 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AA ER+ +E RQ Q LL P ++D + I +H + L +G+ E FG Sbjct: 479 AAQERVNYEYYRQAIGEVSNDQQHLLVPIVLDYSAADAISIRDHRDVLESVGLYLEDFGQ 538 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 N+ + P +++++D ++ T+ E M+C +I++ + Sbjct: 539 NSFVVEHHPTWFKAGQEEDTIKEMVDWVLRDGR-MTVAAFREKTAIMMSCKRAIKANHHL 597 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL+++ + N C HGRP + +D+EK+F R Sbjct: 598 DDRQARALLQKLPECENPFNCPHGRPVLVHFSNTDLEKMFKR 639 >gi|289578352|ref|YP_003476979.1| DNA mismatch repair protein MutL [Thermoanaerobacter italicus Ab9] gi|289528065|gb|ADD02417.1| DNA mismatch repair protein MutL [Thermoanaerobacter italicus Ab9] Length = 616 Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats. Identities = 189/617 (30%), Positives = 320/617 (51%), Gaps = 30/617 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L EK IN+I+AGE++ERP+ +KELIENS+DA S + I GG + +++D+G Sbjct: 4 KIRLLDEKTINKISAGEVVERPASIVKELIENSIDAGSKNITVEILEGGIPYIKVSDDGC 63 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + +A +RH TSKI D NI T GFRGEAL SI A+SH+TL ++ G Sbjct: 64 GMNEIDAILAFERHATSKIKSDNDLYNIGTLGFRGEALASIAAISHVTLQTKEEGALFGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G K+ G VEVRD+FF PAR FLK E ITD + ++ +++ Sbjct: 124 KVVVEGGKVIEKTNCGCAKGCSVEVRDVFFNTPARRKFLKKPSTEAMYITDTVTKLCLSH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + K ++ S G+ + I ++ G + ++ + ++ ++ ++ L+ G Sbjct: 184 PEVSFKYVKDKKLQF---ITSGKGDVEDVILRLFGNEVYSSLMSVSFQTEDLKLKILAGK 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N N N + ++NGR V+++ + + I A+ IP+ RYP V L +EIDPRQ+DVN+ Sbjct: 241 NSLNYSNRNMQFFYVNGRYVKNRTLSAAIDEAFKTYIPVNRYPAVFLYMEIDPRQIDVNI 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK--------MISSFHQDNAP 351 HP+K I+F + + + ++I+ +++K + + +K S Q Sbjct: 301 HPSKLEIKFSDERRVFETVYKTIKDSLHKYNLIPEVKIEEKKNIFKIETPTISAEQTKLY 360 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG---- 407 T K + F +N +++L + S DN E + Sbjct: 361 LTSSDKELEEEKKKLDNEFRGKNVFLKDNVLKENSKNSSLDNHLAVYEEYEDEKEEVNKK 420 Query: 408 ----------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + YII + D I+DQHAAHER+++EK + KI ++ + Sbjct: 421 NDITKKISDIRIVGTLFSTYIIVEKEDVFYIIDQHAAHERILYEKFTSQYE--KIQTKQV 478 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 P +++L G+ L+ + + L++LG E FG N+I +RE+P IL + QL +I+ Sbjct: 479 TFPIVVELQPGDLELVQQEKKLLNKLGYTFEEFGNNSIILREVPVILGQPEARQLFIEIV 538 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 +++ D + + E+I+ MAC ++++ + E+ +L +++ N C HGR Sbjct: 539 EKLRDKELINKISLKEESII-MMACKAAVKAMDNLSEREIYKLFEDLKITENPYTCPHGR 597 Query: 578 PTFIKLKLSDIEKLFGR 594 P I + + +EK+F R Sbjct: 598 PVIIAITKTQLEKMFKR 614 >gi|327467944|gb|EGF13434.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK330] Length = 647 Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats. Identities = 187/635 (29%), Positives = 304/635 (47%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 3 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 63 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATEAGQHGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 123 LLVAQGGEIEEHEPASSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 183 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + + I Q+I ++ ++ + ++ + + +T LP Sbjct: 300 HPTKQEVRISKERELMDLISQAIATSLKEQDLIPDALENLAKSTVKRATKPEQTSLPLKE 359 Query: 360 TSLTNTQE------KLFLQENRLSTN---------------------------------- 379 L +E K + E +LS Sbjct: 360 NRLYYDKEQNDFFLKPQVAEQQLSFEETAGLVHEATDEKVEPQPTSVKFAERKLASYDQL 419 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 D D + D +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 DHPELDQASLERAVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERVK 479 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P I + + I + E L GI E +G N +RE Sbjct: 480 YEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRMELLEDAGIFLEEYGANQFILRE 539 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 540 HPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSARD 598 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 599 LLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 633 >gi|320547649|ref|ZP_08041934.1| DNA mismatch repair protein HexB [Streptococcus equinus ATCC 9812] gi|320447724|gb|EFW88482.1| DNA mismatch repair protein HexB [Streptococcus equinus ATCC 9812] Length = 647 Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats. Identities = 177/635 (27%), Positives = 310/635 (48%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERP+ +KEL+ENS+DA SS++ I G Q+TDNG Sbjct: 3 KIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEESGLKKIQVTDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +++ RH TSKI D I T GFRGEA+PSI ++SH T+ + N G Sbjct: 63 GIAQEDVALSLHRHATSKIKSQADLFRIRTLGFRGEAIPSIASISHFTVKTATADENYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P++ GT + V +LF+ PARL ++KS Q E I DV+ R+++A+ Sbjct: 123 LLIAKGGEIEKQEPISTPVGTKITVENLFYNTPARLKYMKSLQSELAHIVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT +M S G+ + I+ + G + +E++ + + GY + Sbjct: 183 PEIAFTLINDGR---QMTTTSGTGDLRQAIAGIYGLNTAKKMIEISNADLDFEVSGYISL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I +I +++ + + ++ + S+ +T LP Sbjct: 300 HPTKQEVRISKEKELMTLISSAIAESLRAQDLIPDALENLAESSTRGMPKPEQTSLPLKQ 359 Query: 360 TSLTNTQEK--LFLQENRLSTN-------------------------------------- 379 ++L +E+ F++ + + Sbjct: 360 SNLYYDKERHDFFVKSDTVEEQPVQLYNEVDTPVKEVDKQSSVKYAQRSTQGNLADGEHD 419 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 DL + ++ + ++ E++ + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 DLDFKNKSKINKLLENLDGEESSTFPELDYFGQMHGTYLFAQGNGGLYIIDQHAAQERVK 479 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R + Q LL P + + + + E E L+++GI E +G N +RE Sbjct: 480 YEYYRDKIGDVDASLQQLLMPYLFEFSGADFIKLQEKMELLNQVGINLEPYGNNTFILRE 539 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P + ++ I + ++ D ++ ++ +++ + M+C SI++ + + Sbjct: 540 HPIWMKEEEIESAVYEMCDMLLLTNEV-SVKKYRAELAIMMSCKRSIKANHTLDDYSARQ 598 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 599 LLVQLSQCKNPYNCPHGRPVLVNFTKSDMEKMFRR 633 >gi|20455140|sp|Q9CDL1|MUTL_LACLA RecName: Full=DNA mismatch repair protein mutL Length = 656 Score = 508 bits (1307), Expect = e-141, Method: Composition-based stats. Identities = 186/642 (28%), Positives = 320/642 (49%), Gaps = 53/642 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L+E + NQIAAGE++ERP+ +KEL+ENS+DA SS++ + G ++ DNG Sbjct: 3 KIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDNGL 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A++RH TSKI D D I T GFRGEALPSI +VS +T+ + + +G Sbjct: 63 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSTAEEESGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G I ++ P+A GT + V +LF+ PARL ++KS Q E + ITD+I R+++A+ Sbjct: 123 KLVAKGGNIETLEPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SFT K + NG+ + I+ + G ++ + L GY + Sbjct: 183 PEISFTLVNEGKEFLK---TAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFELTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P +L ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAILSIKIDPTLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I ++I +A+++ + ++ + + + + + +T LP Sbjct: 300 HPTKQEVRLSKERELMALISKAIDEALSEGVLIPEALENLQGRAKEKESLSVQTELPLQN 359 Query: 360 TSL--TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE------------------- 398 L N ++ +++E + + + + + D E Sbjct: 360 NPLYYDNVRQDFYVREEATFKINKNQASNDSSEQTFDNFTENQLNTDAVSEKMTDRTVES 419 Query: 399 --------------------------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 S+++ + AQ+H Y++ Q+ +GL +VDQH Sbjct: 420 TTEITDNSLENTVSNFEIDFDNEAKISQSSTFPQLEYLAQLHATYLLCQSKEGLYLVDQH 479 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AA ER+ +E + + Q LL P + L + + ++ E + LH G+ E +G Sbjct: 480 AAQERIKYEYWKDKIGEVSMEQQILLAPYLFTLAKNDFIVLAEKKDLLHEAGVFLEEYGE 539 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 N +RE P L + I + + ++ID I+ SS ++L+ ++ A +AC SI++ + Sbjct: 540 NQFILREHPIWLKETEIEKSINEMIDIIL-SSKEFSLKKYRHDLAAMVACKSSIKANHPL 598 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL E+ N C HGRPT + DI+K+F R Sbjct: 599 DAESARALLAELATCKNPYSCAHGRPTIVHFSGDDIQKMFRR 640 >gi|329736310|gb|EGG72582.1| DNA mismatch repair protein, C-terminal domain protein [Staphylococcus epidermidis VCU028] Length = 645 Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats. Identities = 171/646 (26%), Positives = 311/646 (48%), Gaps = 58/646 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA+++ + + G S ++ DNG Sbjct: 3 KIKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + RH TSKI DD +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIAQEDLGLVFHRHATSKIVADDDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNENGH 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I KI +P GT ++V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYAENGKIIHQKPAKAKKGTDIQVDSLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + + K+ + +G E ++++ G + V ++ +++ L+G+ Sbjct: 182 PEIRISLVSDGK---KLLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSDYHLEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +++DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----KMISSFHQDNAPKTH 354 HP K +R + + I+ I++A K + + L+ K++ +F Q Sbjct: 299 HPTKLEVRLSKEDQLYDLIVTKIREAFKDKILIPQNDLNHAPKKNKVLETFEQQKINFEK 358 Query: 355 LPKY---------------------------ATSLTNTQEKLFLQE-------------- 373 +TSLTN + E Sbjct: 359 QQSQIGETSAPYVHDQKDKNHDVESHKNNLDSTSLTNNESTEVSNELHNYIDDSYLQSQK 418 Query: 374 -----NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 +T++ + ++ V ++ Q+H YII+Q +G+ + Sbjct: 419 EVLFDMEQNTSNEYEISNQQSNDIKGTVSQTPHRRVPYMEIVGQVHGTYIIAQNENGMFM 478 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 +DQHAA ER+ +E R+ Q LL P + E +I ++ ++L ++G+ E Sbjct: 479 IDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLE 538 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 FG + + P K+ ++++D+I+ ++ + ++ E+ M+C SI++ Sbjct: 539 HFGGHDYIVNSYPVWFPKEEAEEIIKDMIELVLKH-KSVDVKKIREDAAIMMSCKKSIKA 597 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ EM L+ ++ + + C HGRP I ++EKLF R Sbjct: 598 NHYLKNNEMADLIDQLREAEDPFTCPHGRPIIINFSNYELEKLFKR 643 >gi|328957013|ref|YP_004374399.1| DNA mismatch repair protein MutL [Carnobacterium sp. 17-4] gi|328673337|gb|AEB29383.1| DNA mismatch repair protein MutL [Carnobacterium sp. 17-4] Length = 663 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 190/658 (28%), Positives = 317/658 (48%), Gaps = 70/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LS+ + NQIAAGE+IERP+ +KELIEN++DAESS+++ +I G QI DNG Sbjct: 6 KIQELSDVLANQIAAGEVIERPASVVKELIENAIDAESSQIDILIEEAGLKKIQIIDNGL 65 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+ A +RH TSKI DD I T GFRGEALPSI +VS +TL + G Sbjct: 66 GIEPEEVQNAFKRHATSKIYSRDDLFRIRTLGFRGEALPSIASVSEVTLET-SIGGERGT 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G KI R G+ + + +LFF PARL ++KS Q E + +TD++ RMAI++ Sbjct: 125 YLSLKGGKIIEERANEARKGSKITIENLFFNTPARLKYVKSLQTELSNVTDIVNRMAISH 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + ++ + NG+ + ++ + G E+ ++ + + G+ + Sbjct: 185 PNIAFRLVHDGN---QLLRTAGNGDLKQTLAGIYGVATAKKMREIKKEDLDFRVSGFISL 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + INGR +++ + I + Y + +GRYPV + +++DP VDVNV Sbjct: 242 PELTRASRNYISIIINGRYIKNYLLNKAIISGYRSKLMVGRYPVAAIEIDMDPLLVDVNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS--------------VLSKKMISSF 345 HP K +R + I +I ++++K+ + + V +++ F Sbjct: 302 HPTKQEVRISKEKELMQLIESAIHESLSKEQLIPDALENLSFKKKTDLPMVETEQTTFQF 361 Query: 346 HQDNAPK-------THLPKYATSLT---------------------------NTQEKLFL 371 HQ+ P+ Y++S + NTQE F Sbjct: 362 HQERNPEVKNENNKESENNYSSSTSYNAHHQSRSFEKDSVDEEEKDSFFLKENTQETPFG 421 Query: 372 QENRLS---------------TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 + S + P + + + + Q+H Sbjct: 422 YAPQESHIGEVPNKLVSELVDYHQESPLKTASKLMEKKKIPTESVDQFPTLEYVGQMHGT 481 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y+ +Q GL I+DQHAA ER+ +E R+ Q LL P ++D + I E+ Sbjct: 482 YLFAQNDKGLYILDQHAAQERIKYEYFRKKIGEVSNDLQDLLVPIMLDYPNSDAIKIKEN 541 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 ++ L +GI E FG N+ +R P ++ ++R++ID +++ + ++ E Sbjct: 542 NDALETVGIFLEPFGQNSFLLRSHPVWFNQGEEESIVREMIDLLLEQG-SISVAKFREAT 600 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C GSI++ + E LL++++K N C HGRP I D+EK+F R Sbjct: 601 AIMMSCKGSIKANHYLNDAEARALLKDLKKTENPYNCPHGRPVLIHFTNKDMEKMFKR 658 >gi|224476433|ref|YP_002634039.1| DNA mismatch repair protein [Staphylococcus carnosus subsp. carnosus TM300] gi|254766175|sp|B9DPC0|MUTL_STACT RecName: Full=DNA mismatch repair protein mutL gi|222421040|emb|CAL27854.1| putative DNA mismatch repair protein MutL [Staphylococcus carnosus subsp. carnosus TM300] Length = 646 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 173/646 (26%), Positives = 301/646 (46%), Gaps = 59/646 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L + N+IAAGE++ERP +KEL+EN+LDA+++ + I G ++ DNG G Sbjct: 4 IKELQTSLANKIAAGEVVERPGSVVKELLENALDAKATEINIEIKQSGIESIRVVDNGTG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ + RH TSK+ + D +I T GFRGEAL SI +V+ +TL + +G + Sbjct: 64 IEEDDLKLVFHRHATSKLHEDSDLFHIRTLGFRGEALASISSVAKVTLRTCTDGQ-SGHE 122 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I +P GT + V LF+ PARL ++KS E ITD++ RMA+++P Sbjct: 123 IYAEDGAILEQKPAKAKKGTDILVESLFYNTPARLKYVKSLYTELGKITDIVNRMAMSHP 182 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V FT ++ + + +G E ++++ G + V + +++ L+GY P Sbjct: 183 NVRFTLTSDDK---VLIKTNGSGRTNEVMAEIYGMKVAKDLVHITGDTSDYHLEGYVAKP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +R N + +FINGR +++ + I Y + +GRYP+ + +E+DP VDVNVH Sbjct: 240 EHSRSNRHYISIFINGRYIKNFVLNKAIVEGYHTLLTIGRYPICYINIEMDPILVDVNVH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----KMISSFHQDN------ 349 P K +R + I+Q IQ+A K + + +K K++ F Q Sbjct: 300 PTKLEVRLSKEEQLYQLIVQKIQEAFKDKILIPHNDENKLYKKNKVLDVFEQQKLDFENR 359 Query: 350 ---APKTHLPKYATSLTNTQEKL---------------------------FLQENRLSTN 379 P P T N L+ N ++ Sbjct: 360 TASNPPAEKPDEETDRVNENSDTQAFQTNEQTSENGSDASYQAGQRAVLQDLEGNTKNSE 419 Query: 380 DLLPSDDPTYSEDNDPVEESE-----------ATHYQLGIACAQIHQNYIISQTTDGLVI 428 L S+ + + +E SE Q+H YII+Q G+ + Sbjct: 420 GLFDSEATSNEAASAEIESSEDDVRETEHAKPHRRVPYMEVVGQVHGTYIIAQNETGMFM 479 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 +DQHAA ER+ +E R Q LL P + E +I ++ ++L ++G+ E Sbjct: 480 IDQHAAQERIKYEYFRDKIGEVTNEVQNLLIPMTFHFSKDEQMIINQYKDELDKVGVHLE 539 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 FG + + P K+ ++++D+++ +++ ++ E M+C SI++ Sbjct: 540 PFGSHDYIVNSYPVWFPKEEAQEIIQDMVEYVLEHRKVD-IKKIREEAAIMMSCKKSIKA 598 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ EM L+ ++ + + C HGRP I ++E+LF R Sbjct: 599 NHYLRNHEMADLIDQLREMEDPFTCPHGRPIIISFSNYELERLFKR 644 >gi|191639174|ref|YP_001988340.1| DNA mismatch repair protein [Lactobacillus casei BL23] gi|238693004|sp|B3W9W3|MUTL_LACCB RecName: Full=DNA mismatch repair protein mutL gi|190713476|emb|CAQ67482.1| DNA mismatch repair protein mutL [Lactobacillus casei BL23] gi|327383246|gb|AEA54722.1| DNA mismatch repair protein HexB [Lactobacillus casei LC2W] gi|327386431|gb|AEA57905.1| DNA mismatch repair protein HexB [Lactobacillus casei BD-II] Length = 651 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 174/642 (27%), Positives = 309/642 (48%), Gaps = 54/642 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS + NQIAAGE+IERP+ +KEL+ENS+DA++++++ +I+ G +++DNG Sbjct: 3 KIHQLSATLSNQIAAGEVIERPASVVKELVENSIDAQATQIDVLISAAGLQEIRVSDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A RH TSKI + D N+H+ GFRGEAL SI AV+ + L + + G Sbjct: 63 GIAPDDVATAFLRHATSKILTTRDLFNVHSLGFRGEALASIAAVADVKLTT-AMDSGIGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G ++ + A GT VEV DLFF PARL ++KS+Q E I D++ R+A+A Sbjct: 122 QIHVKGGEVEAQSTAAHRRGTDVEVNDLFFNTPARLKYMKSQQTELGKIVDIVSRLAMAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++FT S + + + G+ + ++ + G + V+ + + + G T + Sbjct: 182 PDIAFTVSHDGNMVVR---TAGQGDLRQTLAGIYGLSVARSMVDFKAQDLDFRVSGLTSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR +++ + + Y + +GRYP+ V+ +E+D VDVNV Sbjct: 239 PETTRASRNYLSLVVNGRYIKNFQLTKAVIAGYGSKLMVGRYPMGVINIEMDAALVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV--------------------LSK 339 HP K+ +R + + + ++I+ + K+ + ++ +S Sbjct: 299 HPTKAEVRLSKEDQLSHLLSEAIRTRLAKENLIPDALDNLPKRERYDLDQLELTLNKISP 358 Query: 340 KMISSFHQDNAPK-----------THLPKYATSLTNTQ--------EKLFLQENRLSTND 380 K + S + T + + T+ + +F + RL+ D Sbjct: 359 KTMPSVQPQQGQQLRENTTTNLADTAAEEPTPAPTSPDLEIGDLDDQPIFNEPQRLAAWD 418 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQ--------LGIACAQIHQNYIISQTTDGLVIVDQH 432 + +E E AQ+H Y+++++ DGL I+DQH Sbjct: 419 QRYQRLASNVVPTLMADEPEPDISHVESAERFPNLTYLAQVHGTYLLAESGDGLYILDQH 478 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AA ER+ +E RQ Q LL P ++D + I +H + L +G+ E FG Sbjct: 479 AAQERVNYEYYRQAIGEVSNDQQHLLVPIVLDYSAADAISIRDHRDVLESVGLYLEDFGQ 538 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 N+ + P +++++D ++ T+ E M+C +I++ + Sbjct: 539 NSFVVEHHPTWFKAGQEEDTIKEMVDWVLRDGR-MTVAAFREKTAIMMSCKRAIKANHHL 597 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL+++ + N C HGRP + +D+EK+F R Sbjct: 598 DDRQARALLQKLPECENPFNCPHGRPVLVHFSNTDLEKMFKR 639 >gi|325686750|gb|EGD28776.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK72] Length = 698 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 183/636 (28%), Positives = 302/636 (47%), Gaps = 47/636 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 53 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDNGE 112 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 113 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATEAGQHGT 172 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 173 LLVAQGGEIEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 232 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 233 PEVAFTLISDGREMIR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYISL 289 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 290 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 349 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I ++ ++ + ++ + + + +T LP Sbjct: 350 HPTKQEVRISKERELMALISQAIATSLKEQDLIPDALENLAKSTVKRANKPEQTSLPLKE 409 Query: 357 -----------------------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 + S Q + + + ++ S D Sbjct: 410 NRLYYDKEQNDFFLKPQVAEQQLSFEESAKPFQANTDEKTEPPQSTSVKFAERRPVSYDQ 469 Query: 394 ---------------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 D +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 470 LDHPELDQASLERAVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERV 529 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E R+ + Q LL P I + + I + E L GI E +G N +R Sbjct: 530 KYEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRMELLEDAGIFLEEYGANQFILR 589 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 590 EHPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSAR 648 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 649 DLLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 684 >gi|293366739|ref|ZP_06613415.1| DNA mismatch repair protein HexB [Staphylococcus epidermidis M23864:W2(grey)] gi|291319040|gb|EFE59410.1| DNA mismatch repair protein HexB [Staphylococcus epidermidis M23864:W2(grey)] Length = 645 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 170/646 (26%), Positives = 310/646 (47%), Gaps = 58/646 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA+++ + + G S ++ DNG Sbjct: 3 KIKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + RH TSKI DD +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIAQEDLGLVFHRHATSKIVADDDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNENGH 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I KI +P GT ++V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYAEDGKIIHQKPAKAKKGTDIQVDSLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + + K+ + +G E ++++ G + V ++ +++ L+G+ Sbjct: 182 PEIRISLVSDGK---KLLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSDYHLEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +++DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----KMISSFHQDNAPKTH 354 HP K +R + + I+ I++A K + + L+ K++ +F Q Sbjct: 299 HPTKLEVRLSKEDQLYDLIVTKIREAFKDKILIPQNDLNHAPKKNKVLETFEQQKINFEK 358 Query: 355 LPKY---------------------------ATSLTNTQEKLFLQE-------------- 373 +TS TN + E Sbjct: 359 QQSQIGETSAPYVHDQKDKNHDVESHKNNLDSTSSTNNESTEVSNELHNYIDDSYLQSQK 418 Query: 374 -----NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 +T++ + ++ V ++ Q+H YII+Q +G+ + Sbjct: 419 EVLFDMEQNTSNEYEISNQQSNDIKGTVSQTPHRRVPYMEIVGQVHGTYIIAQNENGMFM 478 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 +DQHAA ER+ +E R+ Q LL P + E +I ++ ++L ++G+ E Sbjct: 479 IDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLE 538 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 FG + + P K+ ++++D+I+ ++ + ++ E+ M+C SI++ Sbjct: 539 HFGGHDYIVNSYPVWFPKEEAEEIIKDMIELVLKH-KSVDVKKIREDAAIMMSCKKSIKA 597 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ EM L+ ++ + + C HGRP I ++EKLF R Sbjct: 598 NHYLKNNEMADLIDQLREAEDPFTCPHGRPIIINFSNYELEKLFKR 643 >gi|125719036|ref|YP_001036169.1| DNA mismatch repair protein [Streptococcus sanguinis SK36] gi|166232112|sp|A3CR14|MUTL_STRSV RecName: Full=DNA mismatch repair protein mutL gi|125498953|gb|ABN45619.1| DNA mismatch repair protein, putative [Streptococcus sanguinis SK36] Length = 647 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 185/635 (29%), Positives = 301/635 (47%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 3 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 63 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATEAGRHGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 123 LLVAQGGEIEEHVPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 183 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I ++ ++ + ++ + + +T LP Sbjct: 300 HPTKQEVRISKERELMALISQAIATSLKEQDLIPDALENLAKSTVKRASKPEQTSLPLKE 359 Query: 357 -----------------------KYATSLTNTQEKLFLQENRLSTN-------------- 379 + S E + ST+ Sbjct: 360 NRLYYDKKQNDFFLKPQVAEQQLSFEESAKPVHEATDEKAEPQSTSVKFAERKPVSYDQL 419 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 D D + D +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 DHPELDQASLERAVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERVK 479 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P I + + I + E L GI E +G N +RE Sbjct: 480 YEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRMELLEDAGIFLEEYGANQFILRE 539 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 540 HPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSARD 598 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 599 LLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 633 >gi|156740125|ref|YP_001430254.1| DNA mismatch repair protein MutL [Roseiflexus castenholzii DSM 13941] gi|156231453|gb|ABU56236.1| DNA mismatch repair protein MutL [Roseiflexus castenholzii DSM 13941] Length = 605 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 183/608 (30%), Positives = 321/608 (52%), Gaps = 19/608 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L + QIAAGE+IERP+ ++EL+EN+LDA + R+ GGG ++ D+G Sbjct: 1 MPIRVLDATVAAQIAAGEVIERPASVVRELVENALDAGARRIVVEARGGGLREIRVQDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++E+ +A RH TSK+S DD +I T GFRGEALPSI AV+ + ++R + G Sbjct: 61 CGIPADEVELAFARHATSKLSTADDLWSIATLGFRGEALPSIAAVAQVICVTRAAGADVG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ I+G ++ ++ P +PGT + VR+LF+ P R +FL+S+ E+ IT V+ + A+A Sbjct: 121 VELRIAGGEVQAIMPRGCSPGTTISVRNLFYNTPVRRDFLRSDAAESAAITSVVTQYALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE----ITLQ 234 YP+V F+ + S NG+ ++ G D + ++ E + ++ Sbjct: 181 YPEVRFSLVIDGRATLQ---TSGNGDLRAATIEIYGLDVARQLLAIDAAVGEGVDLVQVR 237 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTI-RTAYAETIPLGRYPVVVLLLEIDPR 293 G P R + ++FIN R +Q + ++ + AY + GR+P+ +L + + P Sbjct: 238 GLVSPPGLTRSSRAAIHLFINRRAIQPRGQIAIVLEEAYHTLLMKGRHPMAILNITVHPA 297 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST--SSVLSKKMISSFHQDNAP 351 VDVNVHP KS ++FRN T + + + ++++ A+ + G+ + + ++ + Sbjct: 298 AVDVNVHPTKSEVKFRNTTQVMSVLGRAVRTALLESGVRPWEEPGVPASLDTAQRRFELR 357 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE-----SEATHYQL 406 + + + + + D + + + + +P + A+ Sbjct: 358 RLGTSPESAWDAPSWMTAGDKHGEIPAMDDRRAVGQSSAWEREPAPPDAQLITHASKLPP 417 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 QI Q+YI++++ DG+ ++DQHAAHER+ +E++ + I Q LL P++IDL Sbjct: 418 LRIVGQIAQSYIVAESPDGMYLIDQHAAHERITYERLMAQRGAGAIERQELLIPQVIDLP 477 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 ++++ + L G E FG ++ IR IPA+L ++ L +I D + T Sbjct: 478 PTAQDVLLDAADRLAEWGFAVEPFG-RSLRIRAIPAVLYPGDLATALLEIADHLSGRGGT 536 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 D E +L T++C+ S+RSG+ + EM L+ ++E+ + C HGRPT I L + Sbjct: 537 TP-HDWREALLITLSCHTSVRSGQTLSFDEMRGLVLQLERCSSPRTCPHGRPTMILLTTT 595 Query: 587 DIEKLFGR 594 IE+ FGR Sbjct: 596 QIERQFGR 603 >gi|227533757|ref|ZP_03963806.1| DNA mismatch repair protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188593|gb|EEI68660.1| DNA mismatch repair protein [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 651 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 175/642 (27%), Positives = 308/642 (47%), Gaps = 54/642 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS + NQIAAGE+IERP+ +KEL+ENS+DA++++++ +I+ G +++DNG Sbjct: 3 KIHQLSATLSNQIAAGEVIERPASVVKELVENSIDAQATQIDVLISAAGLQEIRVSDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A RH TSKI + D N+H+ GFRGEAL SI AV+ + L + + G Sbjct: 63 GIAPDDVATAFLRHATSKILTTRDLFNVHSLGFRGEALASIAAVADVKLTTAT-DSGIGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G ++ + A GT VEV DLFF PARL ++KS+Q E I D++ R+AIA Sbjct: 122 QIHVKGGEVEAQSTAAHRRGTDVEVNDLFFNTPARLKYMKSQQTELGKIVDIVSRLAIAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++FT S + + + G+ + ++ + G + V+ + + + G T + Sbjct: 182 PDIAFTVSHDGNMVVR---TAGQGDLRQTLAGIYGLSVARSMVDFKAQDLDFRVSGLTSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR +++ + + Y + +GRYP+ V+ +E+D VDVNV Sbjct: 239 PETTRASRNYLSLVVNGRYIKNFQLTKAVIAGYGSKLMVGRYPMGVINIEMDAALVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV--------------------LSK 339 HP K+ +R + + + ++I+ + K+ + ++ +S Sbjct: 299 HPTKAEVRLSKEDQLSHLLSEAIRTRLAKENLIPDALDNLPKRERYDLDELELTLNKISP 358 Query: 340 KMISSFHQDNAP-------------KTHLPKYATSLTNTQ------EKLFLQENRLSTND 380 K + S P A + + + + +F + RL+ D Sbjct: 359 KTMPSVQPQQGQHLRENTTTNLADAAAEEPTPAPTSPDLEIGDLDDQPIFNEPQRLAAWD 418 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQ--------LGIACAQIHQNYIISQTTDGLVIVDQH 432 + +E E AQ+H Y+++++ DGL I+DQH Sbjct: 419 QRYQRLASNVVPTLVADEPEPDISHVESAERFPNLTYLAQVHGTYLLAESGDGLYILDQH 478 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AA ER+ +E RQ Q LL P ++D + I +H + L +G+ E FG Sbjct: 479 AAQERVNYEYYRQAIGEVSNDQQHLLVPIVLDYSAADAISIRDHRDVLESVGLYLEDFGQ 538 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 N+ + P +++++D ++ T+ E M+C +I++ + Sbjct: 539 NSFVVEHHPTWFKAGQEEDTIKEMVDWVLRDGR-MTVAAFREKTAIMMSCKRAIKANHHL 597 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL+++ + N C HGRP + +D+EK+F R Sbjct: 598 DDRQARALLQKLPECENPFNCPHGRPVLVHFSNTDLEKMFKR 639 >gi|325695324|gb|EGD37224.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK150] Length = 698 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 187/636 (29%), Positives = 303/636 (47%), Gaps = 47/636 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 53 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDNGE 112 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 113 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATEAGQHGT 172 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 173 LLVAQGGEIEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 232 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 233 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 289 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 290 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 349 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+I ++ ++ + ++ + + +T LP Sbjct: 350 HPTKQEVRISKERELMALISQAISTSLKEQDLIPDALENLAKSTVKRATKPEQTSLPLKE 409 Query: 360 TSLTNTQE------KLFLQENRLSTN---------------------------------- 379 L +E K + E +LS Sbjct: 410 NRLYYDKEQNDFFLKPQVAEQQLSFEETADPVQANTDEKAEPPQSTSVKFAERRPVSYDQ 469 Query: 380 -DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 D D + D +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 470 LDHPELDQASLERAVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERV 529 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E R+ + Q LL P I + + I + E L GI E +G N +R Sbjct: 530 KYEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRMELLEDAGIFLEEYGANQFILR 589 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 590 EHPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSAR 648 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 649 DLLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 684 >gi|121997465|ref|YP_001002252.1| DNA mismatch repair protein MutL [Halorhodospira halophila SL1] gi|121588870|gb|ABM61450.1| DNA mismatch repair protein MutL [Halorhodospira halophila SL1] Length = 620 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 203/613 (33%), Positives = 337/613 (54%), Gaps = 21/613 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + +I+QIAAGE++ERP +KEL+ENSLDA + RVE I GGK +I D+G G Sbjct: 6 IRPLPDNLIDQIAAGEVVERPGSVVKELVENSLDAGAGRVEVQIERGGKQRIRIADDGDG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + EE+ +A++RH TSK++ ++ I + GFRGEALPSI AVS LTL SR + G Q Sbjct: 66 IPPEELELALRRHATSKLTGLEELERIASLGFRGEALPSIAAVSRLTLASRTAEAELGHQ 125 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G + + PVA PGT V V DLF+ P R FL++E+ E + + +RR+A++ Sbjct: 126 LRCDGGALGAPEPVAHPPGTTVTVDDLFYNTPGRRKFLRTERTELYHVQEALRRLALSRF 185 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F+ + + + ER+++++G F ++A+ + + + L+G+ G+P Sbjct: 186 DVGFSLVHQGRRLWSVPRAESETERHERLAELLGRAFADHALAVELEGAGLQLRGWLGLP 245 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T R + Y+F+NGR V+D+ IR AY++ + YP VL LE+DP +VDVNVH Sbjct: 246 TAARRQGDLQYLFVNGRLVRDRGAAHGIRQAYSDCLYRDHYPAYVLFLEMDPARVDVNVH 305 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +RFR+ + +F+ + I A+ + ++ P T Sbjct: 306 PMKHEVRFRDGRTVHDFLARRIADALATAEPAGAAAPPAAERPPSGAPTGPGQPAAAERT 365 Query: 361 SLTN--------------TQEKLFLQENRLSTNDLLPSDDPTYSE-----DNDPVEESEA 401 + +L+ + + ++ + + + + Sbjct: 366 GPASEGLGGTAELGLPLAEARQLYGGADAAAEGPGGAAEGASSAIAGSPGPSQTRDRESE 425 Query: 402 THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 +LG A QI YI++++ GLV+VD HAAHER+++E+M+ ++ I +Q+LL P Sbjct: 426 ATPELGYAVGQIRDAYILAESQRGLVVVDMHAAHERVVYERMKAQLVASGIATQSLLVPV 485 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 + + E + H L R G++ +R GP ++ + +PA+L++ + L+RD + + Sbjct: 486 SVPVTPAEAERVELHAATLARAGLEVDRAGPESVRVHRVPALLAEADAAALVRDAVAALE 545 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 T ++DR+ +LA MAC+GS+R+GR+++ EM+ LLR++E+ P ++QCNHGRPT+ Sbjct: 546 SEGTGGRVEDRVHALLAQMACHGSVRAGRRLERAEMDALLRDIERTPRAAQCNHGRPTYT 605 Query: 582 KLKLSDIEKLFGR 594 L + +LF R Sbjct: 606 VLDDEALARLFMR 618 >gi|254168302|ref|ZP_04875148.1| DNA mismatch repair protein MutL [Aciduliprofundum boonei T469] gi|197622811|gb|EDY35380.1| DNA mismatch repair protein MutL [Aciduliprofundum boonei T469] Length = 574 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 186/594 (31%), Positives = 319/594 (53%), Gaps = 42/594 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L I+ +IAAGE++ERP+ +KEL+ENS+DA ++++ + GGG ++ D+G G Sbjct: 19 IRVLPPNIVEKIAAGEVVERPASVVKELVENSIDAGATKIAIYVDGGGTKRIRVVDDGCG 78 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ E+ +A++RH TSKI +D + I T GFRGEALPSI AVS LT++++ ++ G + Sbjct: 79 MSEEDAILALKRHATSKIKSEEDLNRISTLGFRGEALPSIAAVSKLTIITKRKEDLVGTK 138 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G +I ++ + PGT V V +LF+ PAR FLKSE+ E I ++ + AI Y Sbjct: 139 IHVEGGEIKNITSIGAPPGTSVLVEELFYNAPARRKFLKSERSEFFQIYSIVEKYAIIYE 198 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F + + N RI+++ G++ + VE+ + N + ++G P Sbjct: 199 NIHFKLVHNGKEIFNLPP----SNLKARIARLWGKEIADAMVEIKKS-NRMKIKGLIAKP 253 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + N+ +F+NGR V+ + I + Y + YP+ +L ++++P ++DVNVH Sbjct: 254 YQVRRDKNKLLIFVNGRYVKSRIIEDALVEGYGTLLFRDSYPIAILKIQVEPDEIDVNVH 313 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +++F++ I+ I I ++ K+ S +++++ Sbjct: 314 PAKLFVKFKDENRIKKEIANLIWSSLTKEENIPSKIIARE-------------------- 353 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 EK+ ++ + D+ ED P+ Q+ YII Sbjct: 354 ---ERAEKIKIEREKQMVFDVEEPSKMRRIEDFIPI-----MRTIPMEILGQVDDTYIIL 405 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 ++++GLVIVDQHAAHER+ +E+ +D I LL P I++L E I+E E L Sbjct: 406 KSSEGLVIVDQHAAHERIRYERFLRDMKDKNIQ--KLLEPIILNLDYKEYQFILEQKESL 463 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 G E FG N+I +R IP IL+K++ +R+I +++++ + ++ + Sbjct: 464 RDYGFIIEDFGTNSIVVRGIPPILTKRDAEDAIREIAQL-----GPKSIEEKRDELIKLI 518 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C G+I++ +K+ EM +L+ ++ + N C HGRPT IK+K D+EK+F R Sbjct: 519 SCKGAIKAHQKLSQFEMEKLIMDLLRCENPYTCPHGRPTMIKIKNEDLEKMFKR 572 >gi|324989666|gb|EGC21610.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK353] gi|327472200|gb|EGF17637.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK408] Length = 688 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 184/635 (28%), Positives = 301/635 (47%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 44 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDNGE 103 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 104 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATEAGQHGT 163 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 164 LLVAQGGEIEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 223 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 224 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 280 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 281 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 340 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I ++ ++ + ++ + + +T LP Sbjct: 341 HPTKQEVRISKERELMALISQAISTSLKEQDLIPDALENLAKSTVKRATKPEQTSLPLKE 400 Query: 357 -----------------------KYATSLTNTQEKLFLQENRLSTN-------------- 379 + + Q + ST+ Sbjct: 401 NRLYYDKEQNDFFLKPQVAEQQLSFEETADPVQANTDEKAEPQSTSVKFAERKPASYDQL 460 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 D D + D +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 461 DHPELDQASLERAVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERVK 520 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P I + + I + E L GI E +G N +RE Sbjct: 521 YEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRMELLEDAGIFLEEYGANQFILRE 580 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 581 HPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSARD 639 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 640 LLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 674 >gi|322421005|ref|YP_004200228.1| DNA mismatch repair protein MutL [Geobacter sp. M18] gi|320127392|gb|ADW14952.1| DNA mismatch repair protein MutL [Geobacter sp. M18] Length = 665 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 199/665 (29%), Positives = 332/665 (49%), Gaps = 76/665 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N+IAAGE++ERP+ KEL+EN+LDA S V I GG+ ++TD+G Sbjct: 4 RIRILPENLTNKIAAGEVVERPASVAKELVENALDAGSKEVAVEIESGGRRLIKVTDSGC 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E+ +A++RH TSKI+ +D + T GFRGEALPS+ +VS LT+ +R + G Sbjct: 64 GMSREDALLALERHATSKIASDEDLFALTTLGFRGEALPSVASVSRLTISTRTSDSLEGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G +I V+ M GT++ VR+LFF PARL F+KS E + +++ R+AI+ Sbjct: 124 EIYLEGGRIKEVKECGMATGTVIAVRNLFFNTPARLKFMKSADTEGGHVGELLTRLAISR 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN-EITLQGYTG 238 P V FT+ + F++ + + ER++ ++G + ++ + + + G Sbjct: 184 PDVRFTYKNDGK----VVFRALDADLKERVATLLGRSIASFLYPVSYQDQGGVRVSGLVA 239 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P +R A+ Y +INGR ++DK + I AY + GRYPVV + ++I P +VDVN Sbjct: 240 APECSRSAASHLYTYINGRFIKDKVVQHAILQAYRNFLERGRYPVVAVFIDIAPGEVDVN 299 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI--------------------------- 331 VHP K +RFR + + I +++ + + Sbjct: 300 VHPTKHEVRFREQGRVHDAIQCAVESVLKQTPWLKRAVPAAAPGRPAEGASVAMVEPAVV 359 Query: 332 ----------STSSVLSKKMISSFHQDNAPKTHLPKYATSLT------------------ 363 + + + + + + LP + + Sbjct: 360 ARAEAATASLRSPADAWQPPVPTPSAPLRQEQALPAQTANRSVSEATQSVSEAKVAEIRE 419 Query: 364 -----NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE---------SEATHYQLGIA 409 + + L+ + + + + D ++E ++ Sbjct: 420 LLVGYQPKPQPPLRPQYHAEPPARNAAEVSPPVDQPKLDEKASARQPESEAPGYFSSLAV 479 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q + +YI+ Q LV++DQHAAHER+ FEK++ +F ++ SQ LL PE ++L E Sbjct: 480 IGQFNASYILCQRGTDLVLIDQHAAHERVAFEKLKGEFVGREVDSQGLLFPETLELSFRE 539 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 A++ EH E+L RLG E FG N + +P ILS + +RDI++E+ S + T Sbjct: 540 SAVLREHVEELRRLGFSFEEFGGNTWLLNGVPQILSGTQYLRTIRDILEELASLSRSRTF 599 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 D E++LA +AC+ +R R + +E++ L R+M++ SS C HGRP L L+++E Sbjct: 600 TDIQEDLLARIACHSVVRGRRTLTPLEISALFRQMDQTDFSSNCPHGRPVMQALTLAEVE 659 Query: 590 KLFGR 594 K+F R Sbjct: 660 KMFKR 664 >gi|329736536|gb|EGG72802.1| DNA mismatch repair protein, C-terminal domain protein [Staphylococcus epidermidis VCU045] Length = 645 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 169/646 (26%), Positives = 309/646 (47%), Gaps = 58/646 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA+++ + + G S ++ DNG Sbjct: 3 KIKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + RH TSKI DD +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIAQEDLGLVFHRHATSKIVADDDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNENGH 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I KI +P GT ++V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYAEDGKIIHQKPAKAKKGTDIQVDSLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + + K+ + +G E ++++ G + V ++ +++ L+G+ Sbjct: 182 PEIRISLVSDGK---KLLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSDYHLEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FIN R +++ + I Y + +GR+P+ + +++DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINSRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----KMISSFHQDNAPKTH 354 HP K +R + + I+ I++A K + + L+ K++ +F Q Sbjct: 299 HPTKLEVRLSKEDQLYDLIVTKIREAFKDKILIPQNDLNHAPKKNKVLETFEQQKINFEK 358 Query: 355 LPKY---------------------------ATSLTNTQEKLFLQE-------------- 373 +TS TN + E Sbjct: 359 QQSQIGETSAPYVHDQKDKNHDVESHKNNLDSTSSTNNESTEVSNELHNYIDDSYLQSQK 418 Query: 374 -----NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 +T++ + ++ V ++ Q+H YII+Q +G+ + Sbjct: 419 EVLFDMEQNTSNEYEISNQQSNDIKGTVSQTPHRRVPYMEIVGQVHGTYIIAQNENGMFM 478 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 +DQHAA ER+ +E R+ Q LL P + E +I ++ ++L ++G+ E Sbjct: 479 IDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLE 538 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 FG + + P K+ ++++D+I+ ++ + ++ E+ M+C SI++ Sbjct: 539 HFGGHDYIVNSYPVWFPKEEAEEIIKDMIELVLKH-KSVDVKKIREDAAIMMSCKKSIKA 597 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ EM L+ ++ + + C HGRP I ++EKLF R Sbjct: 598 NHYLKNNEMADLIDQLREAEDPFTCPHGRPIIINFSNYELEKLFKR 643 >gi|167040249|ref|YP_001663234.1| DNA mismatch repair protein [Thermoanaerobacter sp. X514] gi|300914333|ref|ZP_07131649.1| DNA mismatch repair protein MutL [Thermoanaerobacter sp. X561] gi|307724431|ref|YP_003904182.1| DNA mismatch repair protein MutL [Thermoanaerobacter sp. X513] gi|238687562|sp|B0K1A3|MUTL_THEPX RecName: Full=DNA mismatch repair protein mutL gi|166854489|gb|ABY92898.1| DNA mismatch repair protein MutL [Thermoanaerobacter sp. X514] gi|300889268|gb|EFK84414.1| DNA mismatch repair protein MutL [Thermoanaerobacter sp. X561] gi|307581492|gb|ADN54891.1| DNA mismatch repair protein MutL [Thermoanaerobacter sp. X513] Length = 614 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 193/616 (31%), Positives = 320/616 (51%), Gaps = 29/616 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L EK IN+I+AGE++ERP+ +KELIENS+DA S + I GG + +++D+G Sbjct: 3 KIHLLDEKTINKISAGEVVERPASIVKELIENSIDAGSKNITVEILEGGIPYIKVSDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + +A +RH TSKI D +I T GFRGEAL SI AVSH+TL ++ G Sbjct: 63 GMNEIDAILAFERHATSKIKSDNDLYSIGTLGFRGEALASIAAVSHVTLQTKEEGALFGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G K+ G +EVRD+FF PAR FLK E+ I DV+ ++ +++ Sbjct: 123 KVVVEGGKVVEKTTCGCAKGCSIEVRDVFFNTPARRKFLKRPSTESMYIIDVVTKLCLSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + ++ S NGN + I ++ G + ++ + + +S ++ L+ G Sbjct: 183 PEVSFKYVKDRKLQF---ITSGNGNIEDVILRLFGNEVYSSLMSASFESEDLKLKILAGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N N N + ++NGR V++K + + + A+ IP+ RYP V L +EIDPRQ+DVN+ Sbjct: 240 NSLNYSNRNMQFFYVNGRYVKNKTLSAAVDEAFKTYIPVNRYPAVFLYMEIDPRQIDVNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK--------MISSFHQDNAP 351 HP+K I+F + I + ++I+ +++K + + +K S Q Sbjct: 300 HPSKLEIKFSDERRIFEAVYKTIKDSLHKYNLIPEVKIEEKKNIFEIETPTISAEQTKLY 359 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG---- 407 T K + F +N +++L + S DN E H + Sbjct: 360 LTSSDKELEEEKKKFDNEFKGKNVFLKDNVLKENSKNSSLDNHLAVYEEYEHEKEEINKN 419 Query: 408 ---------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 + YII + D I+DQHAAHER+++EK + KI ++ + Sbjct: 420 DLAKKISDIRIVGTLFSTYIIVEKEDVFYIIDQHAAHERILYEKFTSQYE--KIQTRQVT 477 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P +++L + L+ + E L++LG E FG N I +RE+P IL + QL DI++ Sbjct: 478 FPIVVELQPRDLELVHQEKELLNKLGYVFEEFGNNCIILREVPVILGQPEARQLFIDIVE 537 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ D + + ENI+ MAC ++++ + E+++L +++ N C HGRP Sbjct: 538 KLKDKELINKISLKEENII-MMACKAAVKAMDNLSEKEIHKLFDDLKITENPYTCPHGRP 596 Query: 579 TFIKLKLSDIEKLFGR 594 I + + +EK+F R Sbjct: 597 VIIAITKTQLEKMFKR 612 >gi|50085465|ref|YP_046975.1| enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA [Acinetobacter sp. ADP1] gi|49531441|emb|CAG69153.1| enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA [Acinetobacter sp. ADP1] Length = 653 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 209/642 (32%), Positives = 342/642 (53%), Gaps = 49/642 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE+IERP+ +KEL+EN++DA ++ + +A GG + +I DNG Sbjct: 10 RIHTLDPALANQIAAGEVIERPASVVKELLENAIDAGATELIIRVAQGGSTLIEIIDNGL 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+AV RH TSKI +D I + GFRGEAL SI AVS L+LMS + G Sbjct: 70 GIHPDDLPLAVMRHATSKIKTPEDLHAIVSLGFRGEALASIAAVSRLSLMSSQTDDGVGY 129 Query: 120 QIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++ ++ +A+ GT + V+DLFF +PAR FLK E I +++RR+A+ Sbjct: 130 QVEVNGTAFDHQEIQAIALRKGTHIRVQDLFFNVPARRKFLKKPSTEFGHIEEIVRRLAL 189 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + ++ F + + + +R+ Q++G+ F NA L+ +S + L G+ Sbjct: 190 THFEIRFVLEHNDQIKLNLPIADSGVLRFQRVQQLLGQQFTQNAYWLDTESISMRLSGWL 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R A+ YV++NGR V+DK I +R AY + +Y +L LE+DP QVDV Sbjct: 250 GHPSDARSQADLQYVYVNGRIVKDKTISHALRMAYDGILHGHQYSAYLLFLEVDPDQVDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS----------------KKM 341 NVHP K IRF N + F+ ++ + + +++ + + Sbjct: 310 NVHPTKHEIRFLNQREVHEFVRHHAKETLAQFQTASADLAQAMKSNEPKDILRDQPKHQE 369 Query: 342 ISSFHQDNAPKTHLPKYA----------------TSLTNTQEKLFLQENRLSTNDLLPSD 385 S H+ +A + + A T ++ K R+ D + + Sbjct: 370 QFSLHRTDATENPVVNRAEDTQIEYRKELSTDLLTEFNASRPKTVEYSTRMPVRDPVQLN 429 Query: 386 DPTYSEDNDPVEESEA------------THYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 + + EES + + LG+A AQ+H YI++Q T+GL+IVD HA Sbjct: 430 NALKTYLAPLREESGSAITASSDVVSGVDEFPLGVAIAQLHGIYILAQNTEGLIIVDMHA 489 Query: 434 AHERLIFEKMRQDFNSTKIT-SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AHER++ ++M+ ++ + SQ LL P+II + + + I + L RLG+ +++G Sbjct: 490 AHERILLQQMKAAWDKPEFWISQQLLIPKIISITRMQASRIEDLKSQLLRLGLDIDQYGD 549 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 +R +PAIL K N +L+ +++ ++ + L + + ILA MAC+G++R+ R + Sbjct: 550 EQAIVRGVPAILQKANFEKLIPELLHDLDPNDEAQALLQKRDTILAGMACHGAVRAHRML 609 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME+ +SQCNHGRPT+ L ++KLF R Sbjct: 610 SLSEMNALLRQMEQTEFASQCNHGRPTWRAFPLHQLDKLFAR 651 >gi|227891124|ref|ZP_04008929.1| DNA mismatch repair protein [Lactobacillus salivarius ATCC 11741] gi|227866998|gb|EEJ74419.1| DNA mismatch repair protein [Lactobacillus salivarius ATCC 11741] Length = 659 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 183/649 (28%), Positives = 309/649 (47%), Gaps = 61/649 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE++ERP+ +KEL+ENS+DA + +++ +I G QI D+G Sbjct: 3 KIHELSEILANQIAAGEVVERPASVVKELVENSIDAGAKQIDIIIEDAGLKSIQIIDDGN 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ A +RH TSKI D D +HT GFRGEALPSI +VS + + + G Sbjct: 63 GIEAEDVETAFKRHATSKIIDRKDLFKVHTLGFRGEALPSIASVSDVVMETAVSGQA-GT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G ++ A GT + V DLF+ PARL +LKS Q E + I+D++ R+A+++ Sbjct: 122 KIHIKGGEVLEKTLSASREGTTITVSDLFYNTPARLKYLKSVQTELSYISDIVNRLALSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V+ + + ++ + NGN + I + G V+ + + + + GYT + Sbjct: 182 TDVALSLTNNGR---QLLQSAGNGNLQQTIGAIYGVQNARQMVKFEDANLDFKISGYTSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR V++ + + Y + GRYP+ VL + +DP VDVNV Sbjct: 239 PKLTRASRNYISLLVNGRYVKNFQLTKAVIEGYGSKLMTGRYPITVLSIGLDPTLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------QDN 349 HP K I+ + FI ++I + I ++ + + + K + + Sbjct: 299 HPTKQEIKISKEDELVTFIKKTIFERIGQENLIPDGLQNIKSKTKEKLDFEQLKVGLNEA 358 Query: 350 APKTHLPKYATSLTNT------------------------------------QEKLFLQE 373 + + ++ T +T ++K L+ Sbjct: 359 SKQYQTKQHRTGITPEVTAALVGEKLTKDESQTQTNEKIKEETKVELSPIIIKDKQDLKS 418 Query: 374 NRLSTNDLLPSDDPTYSEDNDPVEES--------EATHYQLGIACAQIHQNYIISQTTDG 425 +R+ D +E EES +A + + Q+H ++ ++ +G Sbjct: 419 DRVKEWDEKYQSRNKETEVTSIAEESGSVDDERKDAPRFPILRYIGQMHGTFLFAEGEEG 478 Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L IVDQHAA ER+ +E R++ T Q LL P ++ + +I E+ + L LGI Sbjct: 479 LYIVDQHAAQERVKYEYYREEIGKVSPTQQNLLVPIVLTYPTTDSLIINENVDKLKELGI 538 Query: 486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 E FG N IR+ P + ++R++ID + ++ E M+C S Sbjct: 539 YLEDFGQNTYIIRQHPTWFKEGQEESIIREMIDYFL-KDRKLSIAKFREKTAIMMSCKRS 597 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 I++ + + +L +++ N C HGRP +KL D+E +F R Sbjct: 598 IKANHHLDDKQAKSILEQLKTCENPFNCPHGRPVLVKLSNKDLEHMFKR 646 >gi|193214447|ref|YP_001995646.1| DNA mismatch repair protein MutL [Chloroherpeton thalassium ATCC 35110] gi|238692707|sp|B3QW86|MUTL_CHLT3 RecName: Full=DNA mismatch repair protein mutL gi|193087924|gb|ACF13199.1| DNA mismatch repair protein MutL [Chloroherpeton thalassium ATCC 35110] Length = 640 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 183/641 (28%), Positives = 299/641 (46%), Gaps = 54/641 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+KL + + N+I+AGE+++RP+ A+KEL+EN++DA + + I GK+ Q+ DNG G Sbjct: 4 IKKLPDIVANKISAGEVVQRPASAVKELLENAIDAGADEITLAIKAAGKTLIQVIDNGCG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ E+ + +R TSKISD D N+HT GFRGEAL SI +VS + L ++ + TG Sbjct: 64 LSEEDATLCFERFATSKISDVGDLENLHTLGFRGEALASIASVSQVELKTKRYDDRTGTL 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ISG + V GT +R+LF+ +PAR FLK+ E I + ++ + YP Sbjct: 124 VKISGGRFEEVSRTETPNGTAFSIRNLFYNVPARRKFLKTNATEYKHIFETVQAQTLVYP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + + F + + N N ER+ G+DF N +E E+++ + L+GY G P Sbjct: 184 DIKWRFYSDDEEIFSFL----NNNLSERLDYFFGKDFSQNLIEFTEENDFMKLRGYLGKP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + NQ ++FIN R Q K + S I TAY E + YP ++ ++I P +DVNVH Sbjct: 240 AMMKRTKNQQFLFINNRVTQSKLLSSAIMTAYGELLGEREYPFFLIYMDIAPHYIDVNVH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA---------- 350 P K ++F + I N + ++ I S + + +K S + Sbjct: 300 PTKMEVKFDDERNIYNMVHSVVKHRIKTLDFSPNVQVEEKPDSPRPTGESFNFPGVAKRL 359 Query: 351 -------------------------------------PKTHLPKYATSLTNTQEKLFLQE 373 PK + ++ +T+ L + Sbjct: 360 SYNDRDADMRSSNALFRDYKTYYKAQDERAEPGFFANPKREMDWRSSLPAHTEASLTPPK 419 Query: 374 NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 + D E + E Q+H YI++Q GL+I+DQH Sbjct: 420 QAEPEGNPTFHDGSRQMEIFIQSRDDEPATAGQERFVWQLHNTYILTQIKSGLLIIDQHV 479 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 AHER+++E+ S SQ LL P L E ++ E DL +LG Sbjct: 480 AHERILYERAIAVMESNVPNSQQLLFPHSAKLSAWEFDVLKEIKTDLVQLGFSLRILDQR 539 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQ 553 + + IP + ++L +++++ D L+ R +N+ + AC SI +G+K+ Sbjct: 540 TVLVEGIPPDVMPGREERILHEMLEQYQDYQQNLKLEQR-DNVAKSYACRSSIMAGQKLS 598 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EM L+ ++ C HGRP IKL + +++K+FGR Sbjct: 599 RNEMTSLIDQLFATSMPYVCPHGRPIIIKLSIEELDKMFGR 639 >gi|262283653|ref|ZP_06061418.1| DNA mismatch repair protein mutL [Streptococcus sp. 2_1_36FAA] gi|262260710|gb|EEY79411.1| DNA mismatch repair protein mutL [Streptococcus sp. 2_1_36FAA] Length = 648 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 185/636 (29%), Positives = 301/636 (47%), Gaps = 47/636 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENSLDA +S++ I G Q+TDNG Sbjct: 3 KIIELPEILANQIAAGEVIERPSSVVKELVENSLDAGASQITIEIEEAGLKTIQVTDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 63 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATENGQHGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 123 LLVAQGGEIEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 183 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I ++ ++ + ++ + + +T LP Sbjct: 300 HPTKQEVRISKERELMALISQAIATSLKEQDLIPDALENLAKSTVKRATKPEQTSLPLKE 359 Query: 357 -------------------KYATSLTNTQEKLFLQENRLSTN------------------ 379 + S + + + N S Sbjct: 360 NRLYYDKEQNDFFLKPQVAEQQISFEKSAKPVHEATNEKSEPPQSTSVKFAERKLVSYDQ 419 Query: 380 -DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 D D + D +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 LDHPELDQASLERAVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERV 479 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E R+ + Q LL P I + + I + E L GI E +G N +R Sbjct: 480 KYEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRMELLEDAGIFLEEYGANQFILR 539 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 540 EHPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSAR 598 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 599 DLLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 634 >gi|332799275|ref|YP_004460774.1| DNA mismatch repair protein mutL [Tepidanaerobacter sp. Re1] gi|332697010|gb|AEE91467.1| DNA mismatch repair protein mutL [Tepidanaerobacter sp. Re1] Length = 613 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 195/615 (31%), Positives = 319/615 (51%), Gaps = 27/615 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + I +QIAAGEIIERP +KEL+ENS+DA S + I GGK ++ D+G Sbjct: 3 KINILEQDIASQIAAGEIIERPVSVVKELVENSIDAGSKNIIVEIEKGGKKSIRVIDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ ++I +A +RH TSKI+ +D +I+T GFRGEAL SI AVS+L++ ++ G Sbjct: 63 GISRDDIRLAFERHATSKINVIEDIFHINTLGFRGEALASIAAVSNLSVTTKTRNEPIGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 IS I V A G ++EV++LFF PARL FL S+ E + ITD+I R A+ Sbjct: 123 ICKISAGVIEDVSETASKNGCLIEVKNLFFNTPARLKFLSSDTHENSRITDLITRFAMGN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 +SF K ++ + S NG++ E I++V G D + + + + + GY Sbjct: 183 INISFRLIIDKK---ELFYSSGNGDYREVIAKVYGMDLAKQILYIEKAFDNGKIWGYISK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+FNRGN F+N R V+D + + AY IP+ R+P+ ++ ++ID VDVNV Sbjct: 240 PSFNRGNRTGQTFFVNNRFVKDLGLTFCLERAYKTMIPIRRFPIAIIFIDIDNSLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA--------- 350 HP+K I+F+N + + + +I + + + LS + Q + Sbjct: 300 HPSKMEIKFQNENQVHHALFHAINETLKNHVLIPKETLSISPVKQSQQQISIETQVELTS 359 Query: 351 ---PKTHLPKYATSLTNTQEKLFLQENRLSTN----DLLPSDDPTYSEDNDPVEESEATH 403 P +S N Q + R + D + + + ++ P+E E Sbjct: 360 DGLPDNEYDVSDSSNINNQTAATKEFVREAYTVIDVDAIKNKEHLQNDSYIPIESDETMQ 419 Query: 404 ----YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 Y+ Q+ YI+ ++ + ++DQHAAHER+++E + + SQTL Sbjct: 420 IIKKYEFQKILGQLFNTYIVVESKNRFYLIDQHAAHERILYEYYSKKYAKQLSNSQTLAA 479 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P ++ L E L+ + ED+ ++G FG ++I IR +P I +K P LRD +D+ Sbjct: 480 PYVLYLSAQEMMLLDNYKEDILKIGFDFSIFGSDSILIRSVPYIFNKPVDPITLRDALDQ 539 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 + + E ++ +M+C+ +I++G + IE+ LL +++K C HGRPT Sbjct: 540 LSSNEYARYPSK--ERLIISMSCHAAIKAGDVLSPIEIQELLDQLKKTEVPYTCPHGRPT 597 Query: 580 FIKLKLSDIEKLFGR 594 I + L++++K F R Sbjct: 598 IIDITLNELQKKFKR 612 >gi|323464584|gb|ADX76737.1| DNA mismatch repair protein MutL [Staphylococcus pseudintermedius ED99] Length = 646 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 169/647 (26%), Positives = 301/647 (46%), Gaps = 59/647 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L + N+IAAGE++ERPS +KEL+ENS+DA ++ + + G + ++ DNG Sbjct: 3 KIKTLHTSLANKIAAGEVVERPSSVVKELLENSIDAGATEINIEVMESGIASIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + RH TSK+ DD +I T GFRGEAL SI +V+ +TL + G Sbjct: 63 GILQDDLGLVFHRHATSKLVEDDDLFHIRTLGFRGEALASIASVAKVTLQTST-DGVAGY 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ +I S +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EVYAEEGEIISEKPAKARKGTDIRVDALFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + S + N +G E ++++ G + + + +++ L GY Sbjct: 182 PDIRIALSNDGKKILQTN---GSGRTNEVMAEIYGMKVARDLIRIEGDTSDYHLTGYVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + ++ Y + +GRYP+V L +E+DP VDVNV Sbjct: 239 PEHSRSNRHYISLFINGRYIKNFLLNKAVQEGYHTLMMIGRYPIVYLNIEMDPVLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL-----SKKMISSFHQDNAPKTH 354 HP K +R + + I+ I++A + + + L KK+++ F Q Sbjct: 299 HPTKLEVRLSKEDQLFDLIVAKIREAFKDQLLIPKNDLKSKYEPKKVLNQFEQQKMAFDQ 358 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT-------------------------- 388 + T +++ +++ + E D+ D Sbjct: 359 IQAAQTQTSHSNKEMTIDEEPAPYTDVTEPSDTAKTPTTSETNDDYAERQRALLNDMVEA 418 Query: 389 ---------------------YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLV 427 +++ + Q+H YII+Q +G+ Sbjct: 419 PSPINEVNSTDDSSDGATVSEIQQNHPQPSDKPKRRVPYMEVVGQVHGTYIIAQNDEGMY 478 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 ++DQHAA ER+ +E R +Q+LL P + + E +I +H + L GI Sbjct: 479 LIDQHAAQERIKYEYYRDKIGEVNNENQSLLIPLTFNFTKDEQLIIEQHLDPLREAGIFL 538 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR 547 E FG + + P ++N+ ++++D+I+ +I + E M+C SI+ Sbjct: 539 EPFGGHDYIVDSYPVWFPQENVEEMIKDMIEYVIRHKKVD-IAKFREEAAIMMSCKRSIK 597 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + ++ EM L+ ++ + + C HGRP I ++E+LF R Sbjct: 598 ANHYLKPNEMADLIDQLGEMEDPFTCPHGRPVIINFSNYELERLFKR 644 >gi|27467893|ref|NP_764530.1| DNA mismatch repair protein [Staphylococcus epidermidis ATCC 12228] gi|57866809|ref|YP_188446.1| DNA mismatch repair protein [Staphylococcus epidermidis RP62A] gi|251810728|ref|ZP_04825201.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis BCM-HMP0060] gi|282876271|ref|ZP_06285138.1| DNA mismatch repair protein, C-terminal domain protein [Staphylococcus epidermidis SK135] gi|38372356|sp|Q8CPE9|MUTL_STAES RecName: Full=DNA mismatch repair protein mutL gi|71151980|sp|Q5HPP4|MUTL_STAEQ RecName: Full=DNA mismatch repair protein mutL gi|27315438|gb|AAO04572.1|AE016747_69 DNA mismatch repair protein [Staphylococcus epidermidis ATCC 12228] gi|57637467|gb|AAW54255.1| DNA mismatch repair protein HexB [Staphylococcus epidermidis RP62A] gi|251805888|gb|EES58545.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis BCM-HMP0060] gi|281295296|gb|EFA87823.1| DNA mismatch repair protein, C-terminal domain protein [Staphylococcus epidermidis SK135] gi|329728043|gb|EGG64487.1| DNA mismatch repair protein, C-terminal domain protein [Staphylococcus epidermidis VCU144] Length = 645 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 170/646 (26%), Positives = 310/646 (47%), Gaps = 58/646 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA+++ + + G S ++ DNG Sbjct: 3 KIKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + RH TSKI DD +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIAQEDLGLVFHRHATSKIVADDDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNENGH 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I KI +P GT ++V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYAENGKIIHQKPAKAKKGTDIQVDSLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + + K+ + +G E ++++ G + V ++ +++ L+G+ Sbjct: 182 PEIRISLVSDGK---KLLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSDYHLEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +++DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----KMISSFHQDNAPKTH 354 HP K +R + + I+ I++A K + + L+ K++ +F Q Sbjct: 299 HPTKLEVRLSKEDQLYDLIVTKIREAFKDKILIPQNDLNHASKKNKVLETFEQQKINFEK 358 Query: 355 LPKY---------------------------ATSLTNTQEKLFLQE-------------- 373 +TS TN + E Sbjct: 359 QQSQIGETSAPYVHDQKDKNHDVESHKNNLDSTSSTNNESTEVSNELHNHIDDSYLQSQK 418 Query: 374 -----NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 +T++ + ++ V ++ Q+H YII+Q +G+ + Sbjct: 419 EVLFDMEQNTSNEYEISNQQSNDIKGTVSQTPHRRVPYMEIVGQVHGTYIIAQNENGMFM 478 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 +DQHAA ER+ +E R+ Q LL P + E +I ++ ++L ++G+ E Sbjct: 479 IDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLE 538 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 FG + + P K+ ++++D+I+ ++ + ++ E+ M+C SI++ Sbjct: 539 HFGGHDYIVNSYPVWFPKEEAEEIIKDMIELVLKH-KSVDVKKIREDAAIMMSCKKSIKA 597 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ EM L+ ++ + + C HGRP I ++EKLF R Sbjct: 598 NHYLKNNEMADLIDQLREAEDPFTCPHGRPIIINFSNYELEKLFKR 643 >gi|319892318|ref|YP_004149193.1| DNA mismatch repair protein MutL [Staphylococcus pseudintermedius HKU10-03] gi|317162014|gb|ADV05557.1| DNA mismatch repair protein MutL [Staphylococcus pseudintermedius HKU10-03] Length = 646 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 169/647 (26%), Positives = 299/647 (46%), Gaps = 59/647 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L + N+IAAGE++ERPS +KEL+ENS+DA ++ + + G + ++ DNG Sbjct: 3 KIKTLHTSLANKIAAGEVVERPSSVVKELLENSIDAGATEINIEVMESGIASIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + RH TSK+ DD +I T GFRGEAL SI +V+ +TL + G Sbjct: 63 GILQDDLGLVFHRHATSKLVEDDDLFHIRTLGFRGEALASIASVAKVTLQTST-DGVAGY 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ +I S +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EVYAEEGEIISEKPAKARKGTDIRVDALFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + S + N +G E ++++ G + + + +++ L GY Sbjct: 182 PDIRIALSNDGKKILQTN---GSGRTNEVMAEIYGMKVARDLIRIEGDTSDYHLTGYVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + ++ Y + +GRYP+V L +E+DP VDVNV Sbjct: 239 PEHSRSNRHYISLFINGRYIKNFLLNKAVQEGYHTLMMIGRYPIVYLNIEMDPVLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL-----SKKMISSFHQDNAPKTH 354 HP K +R + + I+ I++A + + + L KK++ F Q Sbjct: 299 HPTKLEVRLSKEDQLFDLIVAKIREAFKDQLLIPKNDLKSKYEPKKVLDQFEQQKMAFDQ 358 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT-------------------------- 388 T +++ +++ + E D+ D Sbjct: 359 TQAAQTQTSHSNKEMTIDEEPAPYTDVTEPSDTAKTPTTSETNDDYAERQRALLNDMVEA 418 Query: 389 ---------------------YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLV 427 +++ + Q+H YII+Q +G+ Sbjct: 419 PSPINEVNSTDDSSDGATVSEIQQNHPQPSDKPKRRVPYMEVVGQVHGTYIIAQNDEGMY 478 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 ++DQHAA ER+ +E R +Q+LL P + + E +I +H + L GI Sbjct: 479 LIDQHAAQERIKYEYYRDKIGEVNNENQSLLIPLTFNFTKDEQLIIEQHLDPLREAGIFL 538 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR 547 E FG + + P ++N+ ++++D+I+ +I + E M+C SI+ Sbjct: 539 EPFGGHDYIVDSYPVWFPQENVEEMIKDMIEYVIRHKKVD-IAKFREEAAIMMSCKRSIK 597 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + ++ EM L+ ++ + + C HGRP I ++E+LF R Sbjct: 598 ANHYLKPNEMADLIDQLGEMEDPFTCPHGRPVIINFSNYELERLFKR 644 >gi|253701877|ref|YP_003023066.1| DNA mismatch repair protein [Geobacter sp. M21] gi|259509935|sp|C6E4L2|MUTL_GEOSM RecName: Full=DNA mismatch repair protein mutL gi|251776727|gb|ACT19308.1| DNA mismatch repair protein MutL [Geobacter sp. M21] Length = 650 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 198/650 (30%), Positives = 331/650 (50%), Gaps = 61/650 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L E + N+IAAGE++ERP+ KEL+EN+LDA S V I GG+ +++D G Sbjct: 4 KIRILPENLTNKIAAGEVVERPASVAKELVENALDAGSKEVVVEIESGGRRLIKVSDTGC 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ ++ +A++RH TSKI+ +D ++ T GFRGEALPS+ +VS LT+ +R + G Sbjct: 64 GMSRDDALLALERHATSKIATDEDLFSLCTLGFRGEALPSVASVSRLTISTRTSDSVEGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I G +I V+ M GT++ VR+LFF PARL F+KS + E + +++ R+AI+ Sbjct: 124 EIYAEGGRIKEVKECGMAVGTVISVRNLFFNTPARLKFMKSAETEGGHVGELLTRLAISR 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V FT+ + F++ + + ER++ ++G + ++ + + + G Sbjct: 184 PEVRFTYKNDGK----VMFRALDADLKERVATMLGRSISSFLYPVSYQEGGLKVSGLVAA 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R + Y +INGR ++DK + I AY + GRYPVV + ++I P +VDVNV Sbjct: 240 PECSRSAGSHLYTYINGRFIKDKVVQHAILQAYRNFLERGRYPVVAVFIDIAPGEVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK------------KMISSFHQ 347 HP K +RFR + + I ++++ + + S ++ + SS Sbjct: 300 HPTKHEVRFREQGRVHDAIQKAVESVLKETPWLKRSAVAAASRPAEKGGGALRPFSSMEA 359 Query: 348 DNAPKTHLPKYATSLTNTQE---------------------------------------- 367 A P+ +LT Sbjct: 360 SQAALPVTPQPRPALTPGHPDPPPQAQLQQPLVSESRVAEVRELLVNFQPRPQPPLRPQY 419 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE---ATHYQLGIACAQIHQNYIISQTTD 424 + + S + + SE ++S+ A ++ Q + +YI+ Q Sbjct: 420 RGSVAPREGSPYAPIAAAPVPASEPQSAAQDSDHVAAGYFSSLGVIGQFNASYILCQRGT 479 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 L+++DQHAAHER+ FEK++ F ++ SQ LL PE ++ E A++ EH +L RLG Sbjct: 480 DLILIDQHAAHERVAFEKLKGQFAGREVDSQGLLFPETMEFSFRESAVLREHQAELARLG 539 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 + E FG N ++ +P +LS +RDI++E+ S + D E++LA +AC+ Sbjct: 540 FEFEEFGGNTWLLKGVPQVLSATRYVDTIRDILEELGSLSRSRAFSDIQEDLLARIACHS 599 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +R R + +E+ L ++M++ SS C HGRP L L+++EK+F R Sbjct: 600 VVRGKRTLSPVEIAALFKQMDETDFSSNCPHGRPVMQTLTLAEVEKMFKR 649 >gi|84501416|ref|ZP_00999621.1| DNA mismatch repair protein [Oceanicola batsensis HTCC2597] gi|84390707|gb|EAQ03195.1| DNA mismatch repair protein [Oceanicola batsensis HTCC2597] Length = 597 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 244/596 (40%), Positives = 369/596 (61%), Gaps = 23/596 (3%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 ERP+ A+KEL+EN+LDA + R+E +A GGKS ++ D+G G+ +E +P+A+ RH TSKI Sbjct: 2 ERPASAVKELVENALDAGARRIEITLAEGGKSLIRVKDDGCGIPAEALPLALARHATSKI 61 Query: 81 S-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPG 139 D NIHTFGFRGEALPS+GAV L + +R T A+IA+SG ++ VRP A++ G Sbjct: 62 DGSDLLNIHTFGFRGEALPSLGAVGRLRITTRVAGA-TAAEIAVSGSRMGEVRPAALSGG 120 Query: 140 TIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFT---FSTIKSNRYKM 196 T+VE+RDLFF PARL FL++++ ET +TD+++R+A+A P V F S R Sbjct: 121 TVVELRDLFFATPARLKFLRTDRAETQAVTDIVKRLAMAEPYVGFVLRDVSGGGEGRVTF 180 Query: 197 NFQSTNGNFPE----RISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYV 252 +G+ + R++ V+G +F NA+ ++ + + + GY +PT++RG A ++ Sbjct: 181 RADPESGDMFDALHGRLAAVLGREFAENALRIDAEREGLHMTGYAALPTYSRGAAVAQFL 240 Query: 253 FINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPT 312 F+NGR V+DK + +R AY + + R+P L ++ DP VDVNVHPAKS +RFR+P Sbjct: 241 FVNGRPVRDKLLTGALRAAYMDVLSRDRHPAAALFIDCDPMLVDVNVHPAKSEVRFRDPG 300 Query: 313 IIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ 372 + R ++ ++ A+ + G S+ ++ + + + AP + + + +L Sbjct: 301 LARGLVVSGLRHALAEAGHRASTTVAGATLGAMRPEPAPAGRVYQMDRPSGPARAMAYLG 360 Query: 373 E--------------NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 + +R + E P E + LG A AQ+H+NYI Sbjct: 361 QGPACPDPGVGGVVQDREPDGFDGFAAPSARYEPAAPGPAPELEGHPLGAARAQVHENYI 420 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 ++QT G+VIVDQHAAHERL++EK++ + + +Q LL PEI++L G+CA + E Sbjct: 421 VAQTERGMVIVDQHAAHERLVYEKLKAQTAARGVPAQALLIPEIVELSAGDCARLTEAAG 480 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +L LG+ E FG +A+A+RE PAIL + + L+ DI+DE+ D + TL+ RI+ IL+ Sbjct: 481 ELGALGLTVEPFGGSAVAVRETPAILGEVDARALILDILDELTDGDDSTTLRARIDAILS 540 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MAC+GS+RSGR+M+ EMN LLREME P S QCNHGRPT+++LKL+DIE+LFGR Sbjct: 541 RMACHGSVRSGRRMRIEEMNALLREMEATPMSGQCNHGRPTYVELKLADIERLFGR 596 >gi|125625245|ref|YP_001033728.1| DNA mismatch repair protein [Lactococcus lactis subsp. cremoris MG1363] gi|166232095|sp|A2RP08|MUTL_LACLM RecName: Full=DNA mismatch repair protein mutL gi|124494053|emb|CAL99053.1| DNA mismatch repair protein mutL [Lactococcus lactis subsp. cremoris MG1363] gi|300072055|gb|ADJ61455.1| DNA mismatch repair protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 656 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 196/642 (30%), Positives = 324/642 (50%), Gaps = 53/642 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L+E + NQIAAGE++ERP+ +KEL+ENS+DA SS++ + G ++ DNG Sbjct: 3 KIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDNGL 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A++RH TSKI D D I T GFRGEALPSI +VS +T+ + Q G Sbjct: 63 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSNAQEEAGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G I ++ P+A GT + V +LF+ PARL ++KS Q E + ITD+I R+++A+ Sbjct: 123 KLIAKGGTIETLEPLAKRLGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SFT K + NG+ + I+ + G E+N + L GY + Sbjct: 183 PEISFTLVNEGKEFLK---TAGNGDLRQVIAAIYGIGTAKKMREINGSDLDFELTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P VL ++IDP+ DVNV Sbjct: 240 PELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAVLSIKIDPKLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I ++I + +++ + ++ + + + + +T LP Sbjct: 300 HPTKQEVRLSKERELMTLISKAIDETLSEGVLIPEALENLQGRAKEKGTVSVQTELPLQN 359 Query: 360 TSL--TNTQEKLFLQE------NRLSTNDLLPSDDPTYSEDN------------------ 393 L N ++ F++E N+ +D L + T N Sbjct: 360 NPLYYDNVRQDFFVREEAIFEINKNDNSDSLTEQNSTDYTVNQPETGSVSEKITDRTVES 419 Query: 394 --------------------DPVEE-SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 D +E+ S+ + + AQ+H Y++ Q+ +GL +VDQH Sbjct: 420 SNEFTDRTPKNSVSNFGVDFDNIEKLSQQSTFPQLEYLAQLHATYLLCQSKEGLYLVDQH 479 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AA ER+ +E + + Q LL P + L + + ++ E + LH G+ E +G Sbjct: 480 AAQERIKYEYWKDKIGEVSMEQQILLAPYLFTLPKNDFIVLAEKKDLLHEAGVFLEEYGE 539 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 N +RE P L + I + + ++ID I+ SS ++L+ ++ A +AC SI++ + Sbjct: 540 NQFILREHPIWLKETEIEKSINEMIDIIL-SSKEFSLKKYRHDLAAMVACKSSIKANHPL 598 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LLRE+ N C HGRPT + DI+K+F R Sbjct: 599 DAESARALLRELSTCKNPYSCAHGRPTIVHFSGDDIQKMFRR 640 >gi|321315471|ref|YP_004207758.1| DNA mismatch repair protein [Bacillus subtilis BSn5] gi|320021745|gb|ADV96731.1| DNA mismatch repair protein [Bacillus subtilis BSn5] Length = 627 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 183/628 (29%), Positives = 312/628 (49%), Gaps = 40/628 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K+ +LS+++ N+IAAGE++ERP+ +KEL+EN++DA+S+ +E I G + ++ DNG Sbjct: 3 KVIQLSDELSNKIAAGEVVERPASVVKELVENAIDADSTVIEIDIEEAGLASIRVLDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +E+ A +RH TSKI D D + T GFRGEALPSI +VSHL + + G Sbjct: 63 GMENEDCKRAFRRHATSKIKDENDLFRVRTLGFRGEALPSIASVSHLEITTST-GEGAGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G I S + GT + V +LFF PARL ++K+ E ITDV+ R+A+A+ Sbjct: 122 KLVLQGGNIISESRSSSRKGTEIVVSNLFFNTPARLKYMKTVHTELGNITDVVNRIALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + + NG+ ++ + G + L+ S + ++GY + Sbjct: 182 PEVSIRLRHHGK---NLLQTNGNGDVRHVLAAIYGTAVAKKMLPLHASSLDFEVKGYIAL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR +++ ++ + Y +P+GR+P+ + + +DP VDVNV Sbjct: 239 PEITRASRNYMSSVVNGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA--------- 350 HP+K +R T + + I I+ ++ + S+ L KK + + Sbjct: 299 HPSKLEVRLSKETELHDLIRDGIKDVFKQQQLIPSAQLPKKSAPAIKNEQQFITFDEKPP 358 Query: 351 -----PKTHLPKYA------------------TSLTNTQEKLFLQENRLSTNDLLPSDDP 387 K H P Y+ L + QE L +D+ Sbjct: 359 ERKVPEKAHAPSYSPMKLSSVVKEPVDAEEELPPLQFDAPPIVDQEQTLEVSDVSEEQLE 418 Query: 388 TYSEDNDPVEESEATHY-QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 T+ ++ ++ A+ + Q+H YI++Q +GL I+DQHAA ER+ +E R+ Sbjct: 419 TFEQECHEEQQQPASDRVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREK 478 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 + Q ++ P E +I +H ++L +G+ E FG N+ +R PA K Sbjct: 479 VGEVEPEVQEMIVPLTFHYSTNEALIIEQHKQELESVGVFLESFGSNSYIVRCHPAWFPK 538 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 +L+ +II +++DS ++ E M+C GSI++ R +++ E+ LL ++ Sbjct: 539 GEEAELIEEIIQQVLDSKNID-IKKLREEAAIMMSCKGSIKANRHLRNDEIKALLDDLRS 597 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP I ++EK+F R Sbjct: 598 TSDPFTCPHGRPIIIHHSTYEMEKMFKR 625 >gi|15674190|ref|NP_268365.1| DNA mismatch repair protein [Lactococcus lactis subsp. lactis Il1403] gi|12725273|gb|AAK06306.1|AE006449_12 DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis Il1403] Length = 695 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 186/642 (28%), Positives = 320/642 (49%), Gaps = 53/642 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L+E + NQIAAGE++ERP+ +KEL+ENS+DA SS++ + G ++ DNG Sbjct: 42 KIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDNGL 101 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A++RH TSKI D D I T GFRGEALPSI +VS +T+ + + +G Sbjct: 102 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSTAEEESGT 161 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G I ++ P+A GT + V +LF+ PARL ++KS Q E + ITD+I R+++A+ Sbjct: 162 KLVAKGGNIETLEPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 221 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SFT K + NG+ + I+ + G ++ + L GY + Sbjct: 222 PEISFTLVNEGKEFLK---TAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFELTGYVSL 278 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P +L ++IDP DVNV Sbjct: 279 PELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAILSIKIDPTLADVNV 338 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I ++I +A+++ + ++ + + + + + +T LP Sbjct: 339 HPTKQEVRLSKERELMALISKAIDEALSEGVLIPEALENLQGRAKEKESLSVQTELPLQN 398 Query: 360 TSL--TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE------------------- 398 L N ++ +++E + + + + + D E Sbjct: 399 NPLYYDNVRQDFYVREEATFKINKNQASNDSSEQTFDNFTENQLNTDAVSEKMTDRTVES 458 Query: 399 --------------------------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 S+++ + AQ+H Y++ Q+ +GL +VDQH Sbjct: 459 TTEITDNSLENTVSNFEIDFDNEAKISQSSTFPQLEYLAQLHATYLLCQSKEGLYLVDQH 518 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AA ER+ +E + + Q LL P + L + + ++ E + LH G+ E +G Sbjct: 519 AAQERIKYEYWKDKIGEVSMEQQILLAPYLFTLAKNDFIVLAEKKDLLHEAGVFLEEYGE 578 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 N +RE P L + I + + ++ID I+ SS ++L+ ++ A +AC SI++ + Sbjct: 579 NQFILREHPIWLKETEIEKSINEMIDIIL-SSKEFSLKKYRHDLAAMVACKSSIKANHPL 637 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL E+ N C HGRPT + DI+K+F R Sbjct: 638 DAESARALLAELATCKNPYSCAHGRPTIVHFSGDDIQKMFRR 679 >gi|158520166|ref|YP_001528036.1| DNA mismatch repair protein MutL [Desulfococcus oleovorans Hxd3] gi|158508992|gb|ABW65959.1| DNA mismatch repair protein MutL [Desulfococcus oleovorans Hxd3] Length = 605 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 181/603 (30%), Positives = 291/603 (48%), Gaps = 14/603 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L E + N+IAAGE++ERP+ +KEL+EN++DA +S + I GG+S ++TDNG G Sbjct: 4 IRILPEHLSNKIAAGEVVERPASVVKELVENAIDAGASAIFVEIQNGGRSLVRVTDNGAG 63 Query: 63 MTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M ++ + ++R+ TSKI+D+ I T GFRGEA+PSI +VS L +RP + G + Sbjct: 64 MGKDDALLCLERYATSKIADEKSLFAISTLGFRGEAIPSIASVSEFVLTTRPADADAGTR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I +SG I+ V PGT VEV LFF PAR FLK+ ET I D + A+ P Sbjct: 124 IRVSGGTITDVADTGAPPGTTVEVGRLFFNTPARRKFLKAVATETGHIADTLAAFALCRP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F + ERI+ V+G + ++ + +T+ G+T P Sbjct: 184 DIHFKLVQDGRTVKN---WPRTADPLERITDVLGSQTRGHMAPISCADDTVTISGWTSSP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + ++F+NGR V+D+ + + Y + G +PV + + I +VDVNVH Sbjct: 241 AVTRSTSQKIHLFVNGRIVKDRGLQYALFEGYRGRLVKGAFPVAAIFINIPFDRVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS-------FHQDNAPKT 353 P K+ +RF + + + ++ A S K + Sbjct: 301 PTKNEVRFADQRRVYQALKTAVAGAWAINAAPPWSDGQKPSRPAPAFSLPGVRPAPKVSE 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE--SEATHYQLGIACA 411 + +YAT L E L D + + + Sbjct: 361 SVFQYATPLPLPSFANAGDEPPAPARPRLSGDAEPRPLETPVSSDGHQSFFRFSDLAVVG 420 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 Q+ YI+ Q +V++DQHAAHER++FE ++Q + + Q LL PE ++L A Sbjct: 421 QVFNTYIVCQADAQVVLIDQHAAHERILFEALKQRGQNRPLPGQNLLVPETVELTHKSAA 480 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 I + +G++ E FGP A I+ +PA+L+ + ++ +I ++ D+ Sbjct: 481 AIEPLLDAFAAMGLEIEPFGPTAFVIKAVPAVLADTAVGPMVAEIAEKQADTGFAPDPDT 540 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 ++L MAC+ +IR+ +++ E+ LL ++ N C HGRPT I S+IEK Sbjct: 541 LTNDVLHVMACHAAIRAHQRLSEAEIKALLARLDGCDNPRHCPHGRPTAIFWSTSEIEKA 600 Query: 592 FGR 594 F R Sbjct: 601 FKR 603 >gi|281492891|ref|YP_003354871.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis KF147] gi|281376543|gb|ADA66029.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis KF147] Length = 656 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 187/642 (29%), Positives = 322/642 (50%), Gaps = 53/642 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L+E + NQIAAGE++ERP+ +KEL+ENS+DA SS++ + G ++ DNG Sbjct: 3 KIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDNGL 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A++RH TSKI D D I T GFRGEALPSI +VS +T+ + + +G Sbjct: 63 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSTAEEESGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G I ++ P+A GT + V +LF+ PARL ++KS Q E + ITD+I R+++A+ Sbjct: 123 KLIAKGGNIETLEPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SFT K + NG+ + I+ + G ++ + L GY I Sbjct: 183 PEISFTLVNEGKEFLK---TAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFELTGYVSI 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P +L ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAILSIKIDPTLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I ++I +A+++ + ++ + + + + + +T LP Sbjct: 300 HPTKQEVRLSKERELMALISKAIDEALSEGVLIPEALENLQGRAKEKEALSVQTELPLQN 359 Query: 360 TSL--TNTQEKLFLQEN------------------------------------------- 374 L N ++ +++E Sbjct: 360 NPLYYDNVRQDFYVREEATFKINKNQPSNDSSEQTFDNFTENQLNTDAVNEKITDRTVES 419 Query: 375 --RLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 ++ N L + + ++ + S+++ + AQ+H Y++ Q+ +GL +VDQH Sbjct: 420 TTEITDNSLENTVSNFEIDFDNEAKISQSSTFPQLEYLAQLHATYLLCQSKEGLYLVDQH 479 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AA ER+ +E + + Q LL P + L + + ++ E + LH G+ E +G Sbjct: 480 AAQERIKYEYWKDKIGEVSMEQQILLAPYLFTLAKNDFIVLAEKKDLLHEAGVFLEEYGE 539 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 N +RE P L + I + + ++ID I+ SS ++L+ ++ A +AC SI++ + Sbjct: 540 NQFILREHPIWLKETEIEKSINEMIDIIL-SSKEFSLKKYRHDLAAMVACKSSIKANHPL 598 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL E+ N C HGRPT + DI+K+F R Sbjct: 599 DAESARALLAELATCKNPYSCAHGRPTIVHFSGDDIQKMFRR 640 >gi|324995820|gb|EGC27731.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK678] Length = 648 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 183/635 (28%), Positives = 300/635 (47%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 4 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEDAGLKSIQVTDNGE 63 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS + + G Sbjct: 64 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFIIETATEAGQHGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 124 LLVAQGGEIEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 184 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 241 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I ++ ++ + ++ + + + +T LP Sbjct: 301 HPTKQEVRISKERELMALISQAIATSLKEQDLIPDALENLAKSTVKRANKPEQTSLPLKE 360 Query: 357 -----------------------KYATSLTNTQEKLFLQENRLSTN-------------- 379 + S E + T+ Sbjct: 361 NRLYYDKEQNDFFLKPQVAEQQLSFEESAEPVHEATDEKAESQPTSVKFAERKLASYDQL 420 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 D D + D +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 421 DQPELDQASLERAVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERVK 480 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P I + + I + E L GI E +G N +RE Sbjct: 481 YEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRMELLEDAGIFLEEYGANQFILRE 540 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 541 HPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSARD 599 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 LLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 634 >gi|327463453|gb|EGF09772.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1057] Length = 673 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 188/635 (29%), Positives = 303/635 (47%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 29 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDNGE 88 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 89 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATEAGQHGT 148 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 149 LLVAQGGEIEEHVPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 208 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + IS + G VE++ + + GY + Sbjct: 209 PEVAFTLISDGREMTR---TAGSGNLRQAISGIYGLATAKKMVEISASDLDFEVSGYVSL 265 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 266 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 325 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+I ++ ++ + ++ + + +T LP Sbjct: 326 HPTKQEVRISKERELMALISQAIATSLKEQDLIPDALENLAKSTVKRATKPEQTSLPLKE 385 Query: 360 TSLTNTQE------KLFLQENRLSTN---------------------------------- 379 L +E K + E +LS Sbjct: 386 NRLYYDKEQNDFFLKPQVAEQQLSFEESAGPVHEATNEKAEPQPTSVKFAERKLASYDQL 445 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 D D + D +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 446 DHPELDQASLERAVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERVK 505 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P I + + I + E L GI E +G N +RE Sbjct: 506 YEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRMELLEDAGIFLEEYGANQFILRE 565 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 566 HPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSARD 624 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 625 LLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 659 >gi|289595835|ref|YP_003482531.1| DNA mismatch repair protein MutL [Aciduliprofundum boonei T469] gi|289533622|gb|ADD07969.1| DNA mismatch repair protein MutL [Aciduliprofundum boonei T469] Length = 559 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 186/597 (31%), Positives = 313/597 (52%), Gaps = 43/597 (7%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M IR L I+ +IAAGE++ERP+ +KEL+ENS+DA ++++ + GGG ++ D+ Sbjct: 1 MPEIRVLPPNIVEKIAAGEVVERPASVVKELVENSIDAGATKIAIHVEGGGTKRIRVVDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ E+ +A++RH TSKI +D + I T GFRGEALPSI AVS LT++++ ++ Sbjct: 61 GCGMSEEDAILALKRHATSKIKSEEDLNRISTLGFRGEALPSIAAVSKLTIITKRKEDLV 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G +I + G +I ++ + GT V V DLF+ PAR FLKSE+ E I ++ + AI Sbjct: 121 GTKIHVEGGEIKNITSIGAPSGTSVLVEDLFYNTPARRKFLKSERSEFFQIYSIVEKYAI 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 Y + F + + N RI+++ G++ + VE+ + N + ++G Sbjct: 181 IYENIHFKLVHNGKEVFNLPP----SNLKARIARLWGKEIADAMVEIKKS-NRMKIKGLI 235 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R + N+ +F+NGR V+ + I + Y + YP+ +L ++++P ++DV Sbjct: 236 AKPYQVRRDKNKLLIFVNGRYVKSRIIEDALVEGYGTLLFRDSYPIAILKIQVEPDEIDV 295 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +++F++ I+ I I ++ K+ S + ++ Sbjct: 296 NVHPAKLFVKFKDENRIKKEIANLIWNSLTKEENIPSKIGGRE----------------- 338 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 EK+ ++ + D+ ED PV Q+ Y Sbjct: 339 ------ERAEKIKIEREKQMVFDVEEPSKMRKIEDFIPV-----MRTLPMEILGQVDGTY 387 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 II ++ +GLVIVDQHAAHER+ +E+ +D I LL P I++L E I+E Sbjct: 388 IILKSPEGLVIVDQHAAHERIRYERFLKDMKDRNIQ--KLLEPIILNLDYKEYQFILEQK 445 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 L G E FG N+I +R IP IL+K++ +R+I ++ ++ + ++ Sbjct: 446 GSLRDYGFIIEDFGTNSIVVRGIPPILTKRDAEDAIREIAQL-----GPKSIDEKRDELI 500 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++C G+I++ +K+ EM +L+ ++ + N C HGR T IK+K D+EK+F R Sbjct: 501 KLISCKGAIKAHQKLSQFEMEKLIMDLLRCKNPYTCPHGRSTMIKIKNEDLEKMFKR 557 >gi|242242580|ref|ZP_04797025.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis W23144] gi|242234007|gb|EES36319.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis W23144] Length = 645 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 171/646 (26%), Positives = 310/646 (47%), Gaps = 58/646 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA+++ + + G S ++ DNG Sbjct: 3 KIKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGISAIRVVDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + RH TSKI DD +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIAQEDLGLVFHRHATSKIVADDDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNENGH 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I KI +P GT ++V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYAEDGKIIHEKPAKAKKGTDIQVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + + K+ + +G E ++++ G + V ++ +++ L+G+ Sbjct: 182 PEIRISLVSDGK---KILSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSDYHLEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +++DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----KMISSFHQDN----- 349 HP K +R + + I+ I++A K + + L++ K++ +F Q Sbjct: 299 HPTKLEVRLSKEDQLYDLIVTKIREAFKDKILIPQNDLNRTPKKNKVLETFEQQKINFEK 358 Query: 350 ----------------------------------APKTHLPKYATSLTNTQEKLFLQENR 375 + + + L N + +LQ + Sbjct: 359 KQSQIGETSAPYVHDQKDKNHDVESHRNNLDSTSSTNNESTEVSNELNNHIDDTYLQSQK 418 Query: 376 LSTNDLLPSDDPTYSEDNDP-------VEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D+ Y N V ++ Q+H YII+Q +G+ + Sbjct: 419 EVLFDMEQDTSNEYEILNQQSKDIKGTVSQTPHRRVPYMEIVGQVHGTYIIAQNENGMFM 478 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 +DQHAA ER+ +E R+ Q LL P + E +I ++ ++L ++G+ E Sbjct: 479 IDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLE 538 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 FG + + P K ++++D+I+ ++ + ++ E+ M+C SI++ Sbjct: 539 HFGGHDYIVNSYPVWFPKVEAEEIIKDMIELVLKH-KSVDVKKIREDAAIMMSCKKSIKA 597 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ EM L+ ++ + + C HGRP I ++EKLF R Sbjct: 598 NHYLKNNEMADLIDQLREAEDPFTCPHGRPIIINFSNYELEKLFKR 643 >gi|312277479|gb|ADQ62136.1| DNA mismatch repair protein mutL [Streptococcus thermophilus ND03] Length = 647 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 176/635 (27%), Positives = 310/635 (48%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE++ERP+ +KEL+EN++DA S+++ + G S QITDNG Sbjct: 3 KIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ M+++RH TSKI + D I T GFRGEALPSI ++SHLT+++ G Sbjct: 63 GMAQADVAMSLRRHATSKIKNQGDLFRIRTLGFRGEALPSIASISHLTIVTAADGEVYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G +I S P++ GT + V +LF+ PARL ++KS Q E I DV+ R+++A+ Sbjct: 123 KLVAKGGEIESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT ++ S G+ + I+ + G VE++ + + GY + Sbjct: 183 PEVAFTLLNDGR---QLTQTSGTGDLRQAIAGIYGLTTAKKMVEISNSDLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAIFDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--------------- 344 HP K +R + I +I +++ ++ + ++ + S+ Sbjct: 300 HPTKQEVRISKEKELMALIKSAIAQSLREQDLIPDALENLAKSSTRGATRSVQTSLPLKQ 359 Query: 345 ------------------FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTND------ 380 +D P + + SL +++ +++ + S +D Sbjct: 360 TNLYYDSNRNDFFVTPETVQEDIKPLVSKSESSVSLVANKQQPTVKQAKRSADDSDSEHG 419 Query: 381 -LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 L + + + E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 KLDYKNKSKLKRMLENLTNEETSTFPELEFFGQMHGTYLFAQGQGGLYIIDQHAAQERVK 479 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P + + + + E L+++ I E +G N +RE Sbjct: 480 YEYYREKIGVVDSSLQQLLVPYLFEFSGSDYISLQEKMPLLNQVCIYLEPYGNNTFILRE 539 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P + ++ I + ++ D ++ ++ +++ + M+C SI++ + Sbjct: 540 HPIWMKEEEIESAVYEMCDMLLLTNEV-SVKTYRAELAIMMSCKRSIKANHALDDYSARD 598 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 599 LLVQLAQCKNPYNCPHGRPVLVNFTKSDMEKMFRR 633 >gi|55820157|ref|YP_138599.1| DNA mismatch repair protein [Streptococcus thermophilus LMG 18311] gi|55822045|ref|YP_140486.1| DNA mismatch repair protein [Streptococcus thermophilus CNRZ1066] gi|81559962|sp|Q5M1Y6|MUTL_STRT1 RecName: Full=DNA mismatch repair protein mutL gi|81561138|sp|Q5M6H7|MUTL_STRT2 RecName: Full=DNA mismatch repair protein mutL gi|55736142|gb|AAV59784.1| DNA mismatch repair protein [Streptococcus thermophilus LMG 18311] gi|55738030|gb|AAV61671.1| DNA mismatch repair protein [Streptococcus thermophilus CNRZ1066] Length = 647 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 176/635 (27%), Positives = 310/635 (48%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE++ERP+ +KEL+EN++DA S+++ + G S QITDNG Sbjct: 3 KIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ M+++RH TSKI + D I T GFRGEALPSI ++SHLT+++ G Sbjct: 63 GMAQADVAMSLRRHATSKIKNQGDLFRIRTLGFRGEALPSIASISHLTIVTAADGEVYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G +I S P++ GT + V +LF+ PARL ++KS Q E I DV+ R+++A+ Sbjct: 123 KLVAKGGEIESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT ++ S G+ + I+ + G VE++ + + GY + Sbjct: 183 PEVAFTLLNDGR---QLTQTSGTGDLRQAIAGIYGLTTAKKMVEISNSDLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAIFDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--------------- 344 HP K +R + I +I +++ ++ + ++ + S+ Sbjct: 300 HPTKQEVRISKEKELMALIKSAIAQSLREQDLIPDALENLAKSSTRGATRSVQTSLPLKQ 359 Query: 345 ------------------FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTND------ 380 +D P + + SL +++ +++ + S +D Sbjct: 360 TNLYYDSSRNDFFVTPETVQEDIKPLVSKSESSVSLVANKQQPTVKQAKRSADDSDSEHG 419 Query: 381 -LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 L + + + E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 KLDYKNKSKLKRMLENLTNEETSTFPELEFFGQMHGTYLFAQGQGGLYIIDQHAAQERVK 479 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P + + + + E L+++ I E +G N +RE Sbjct: 480 YEYYREKIGVVDSSLQQLLVPYLFEFSGSDYISLQEKMPLLNQVCIYLEPYGNNTFILRE 539 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P + ++ I + ++ D ++ ++ +++ + M+C SI++ + Sbjct: 540 HPIWMKEEEIESAVYEMCDMLLLTNEV-SVKTYRAELAIMMSCKRSIKANHALDDYSARD 598 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 599 LLVQLAQCKNPYNCPHGRPVLVNFTKSDMEKMFRR 633 >gi|217970237|ref|YP_002355471.1| DNA mismatch repair protein MutL [Thauera sp. MZ1T] gi|217507564|gb|ACK54575.1| DNA mismatch repair protein MutL [Thauera sp. MZ1T] Length = 628 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 193/635 (30%), Positives = 328/635 (51%), Gaps = 50/635 (7%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +LS+ ++NQIAAGE++ERP+ +KE++EN++DA + +E + GG ++ D+ Sbjct: 1 MPHIHRLSDLLVNQIAAGEVVERPASVLKEILENAVDAGARAIEVQLEQGGVRRIRVADD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +E+ +A++RH TSKI+ DD + T GFRGEAL +I AV+ + SR + Sbjct: 61 GCGIARDELALALERHATSKIATLDDLERVGTMGFRGEALAAIAAVARTGITSRAEGASH 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 +I P A++ GT+V+V DL++ PAR FLK+E E D+ RR+A+ Sbjct: 121 AWRIEAG----REPEPAALDQGTVVDVADLYYNTPARRKFLKTESTEFAHCDDMFRRVAL 176 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A P + + +++ R++ ++G+DF+ +A E+ + + L G+ Sbjct: 177 ARPDIGLQLAHNGRVIHRLPPSPPAA----RVAALMGDDFLQHAREVQADAGILRLAGFA 232 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P ++R + + Y F+NGR V+DK + +R AYA+ + R+P VL LE+DP VDV Sbjct: 233 SLPAYSRASRDAQYFFVNGRFVRDKLLAHAVREAYADILHGARHPAYVLFLELDPAGVDV 292 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM---------------- 341 NVHPAK +RFR + F+ ++++ + + G ++ L Sbjct: 293 NVHPAKIEVRFRESRAVHQFVFHAVRRTLAESGAGRAAELHAPAAIGVGAGPAASPASGT 352 Query: 342 --ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD-------------- 385 F P + + + ++ RL+ + Sbjct: 353 VPQGGFSSALPPLSVPTAAHHPASRSWPPADARQGRLAMESASRAYFDFAAGARDSGGAS 412 Query: 386 ------DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 + P E + LG A Q+H YI++Q GLV+VD HAAHER++ Sbjct: 413 LPDRPGEIQSGPRPAPTETATGEAPPLGYALGQLHGIYILAQNAAGLVLVDMHAAHERIL 472 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +EK++ + Q LL P + + + A E E L +G + GP + +R Sbjct: 473 YEKLKTVIDGRP-AVQRLLIPAVFSVGAKDMAAAEEGTEVLAGMGFEIAAAGPQELVVRS 531 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 +PA+L+ + +L+R+++ E+ + T + R +LATMAC+G++R+ R++ EMN Sbjct: 532 VPALLASAPVAELVRELLQELREFPATEVVTARRNELLATMACHGAVRANRQLTLPEMNA 591 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LLR+ME + QCNHGRPT+ +L L+++++ F R Sbjct: 592 LLRDMEATERADQCNHGRPTWTQLSLAELDRFFMR 626 >gi|196247547|ref|ZP_03146249.1| DNA mismatch repair protein MutL [Geobacillus sp. G11MC16] gi|196212331|gb|EDY07088.1| DNA mismatch repair protein MutL [Geobacillus sp. G11MC16] Length = 645 Score = 505 bits (1300), Expect = e-140, Method: Composition-based stats. Identities = 180/646 (27%), Positives = 304/646 (47%), Gaps = 58/646 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I KL +++ N+IAAGE++ERP+ +KEL+EN++DA S+ VE + G + ++ DNG Sbjct: 3 RIHKLDDQLANKIAAGEVVERPASVVKELVENAIDAHSTAVEIELEEAGMTKIRVIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ +A +RH TSKI D D I T GFRGEALPSI +VS + L++ + G Sbjct: 63 GMEEEDCLLAFERHATSKIQDEHDLFRIRTLGFRGEALPSIASVSEVELVTST-GSGPGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G + + A GT + V +LFF PARL ++K+ E DV+ R+A+A+ Sbjct: 122 KLVLKGGALVARERAAGRKGTDITVSNLFFNTPARLKYMKTIHTELGHAADVVNRLALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF + + +G+ ++ + G + + + +S + T++GY + Sbjct: 182 PDVSFRLRHHGK---TLLATNGSGDVRHVLAAIYGMETAKQMIPIEAESLDFTVRGYISL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR V++ ++ I Y +P+GRYP+V L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSLIVNGRYVRNIPLMKAIEAGYHTLLPIGRYPIVFLAIEMDPVLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD----NAPKTHL 355 HPAK +RF + I +I++A ++ + S K + + + A + H Sbjct: 299 HPAKLEVRFSKEAELNELITATIRQAFRQRTLIPSVSADSKTVKAKAEQASWTFAHRVHE 358 Query: 356 PKYATS----------------------------------LTNTQEKLFLQENRLS---- 377 P ++ E + E R Sbjct: 359 PPAQPDGKAGGTSDVTAAASLASEGSLSPLPAAAQADAPAVSEEAEASVVPERRTGVVND 418 Query: 378 ------TNDLLPSDDPTYSEDNDPVEESEAT---HYQLGIACAQIHQNYIISQTTDGLVI 428 D ++PT + + E Q+H YI+++ GL + Sbjct: 419 LPAAELKRDAEVEEEPTEACLPADEQAEEKRAVDRLPPLYPIGQLHGTYILAENEHGLYM 478 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 +DQHAA ER+ +E R+ Q LL P + E I ++L R G+ E Sbjct: 479 IDQHAAQERINYEYFREKLGEVTNEVQELLVPLTFEYPADEYERIAACRDELARCGVFLE 538 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 FGP A +R P K +++ ++I+ ++ + T ++ E M+C +I++ Sbjct: 539 PFGPRAFLVRSHPVWFPKGKEKEIIEEMIEHVLTAKTVD-IKQLREQAAIIMSCKRAIKA 597 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +++ E+ LL + + + C HGRP + +IEKLF R Sbjct: 598 NQHLRTDEIFALLETLRQTTDPFTCPHGRPIIVHFSTYEIEKLFKR 643 >gi|319401415|gb|EFV89625.1| DNA mismatch repair protein mutL [Staphylococcus epidermidis FRI909] Length = 645 Score = 505 bits (1300), Expect = e-140, Method: Composition-based stats. Identities = 171/646 (26%), Positives = 308/646 (47%), Gaps = 58/646 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA+++ + + G S ++ DNG Sbjct: 3 KIKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + RH TSKI DD +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIAQEDLGLVFHRHATSKIVADDDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNENGH 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I KI +P GT ++V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYAEDGKIIHQKPAKAKKGTDIQVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PK+ + + + +G E ++++ G + V ++ +++ L+G+ Sbjct: 182 PKIRIALVSDGK---TLLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSDYHLEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +++DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----KMISSFHQDN----- 349 HP K +R + + I+ I++A K + + L++ K++ +F Q Sbjct: 299 HPTKLEVRLSKEDQLYDLIVTKIREAFKDKILIPQNDLNRTPKKNKVLETFEQQKINFEK 358 Query: 350 ----------------------------------APKTHLPKYATSLTNTQEKLFLQENR 375 + + + L N + +LQ + Sbjct: 359 KQSQIGETSAPYVHDQKDKNHDVESHRNDLDSTSSTNNESTEVSNELHNHIDDSYLQSQK 418 Query: 376 LSTNDLLPSDDPTYSEDNDP-------VEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D+ Y N V ++ Q+H YII+Q +G+ + Sbjct: 419 EVLFDMEQDTSNEYKTLNQQSNDIKGTVSQTPHRRVPYMEIVGQVHGTYIIAQNENGMFM 478 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 +DQHAA ER+ +E R+ Q LL P + E +I ++ ++L ++G+ E Sbjct: 479 IDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYKDELDKVGVHLE 538 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 FG + + P K ++++D+I+ ++ + ++ E+ M+C SI++ Sbjct: 539 HFGGHDYIVNSYPVWFPKVEAEEIIKDMIELVLKH-KSVDVKKIREDAAIMMSCKKSIKA 597 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ EM L+ ++ + + C HGRP I ++EKLF R Sbjct: 598 NHYLKNNEMADLIDQLREAEDPFTCPHGRPIIINFSNYELEKLFKR 643 >gi|323341471|ref|ZP_08081712.1| DNA mismatch repair protein HexB [Lactobacillus ruminis ATCC 25644] gi|323091082|gb|EFZ33713.1| DNA mismatch repair protein HexB [Lactobacillus ruminis ATCC 25644] Length = 639 Score = 505 bits (1300), Expect = e-140, Method: Composition-based stats. Identities = 175/627 (27%), Positives = 292/627 (46%), Gaps = 39/627 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +LS + +QIAAGE++ERP+ +KEL+EN+LDA+++++ G ++TD+G G Sbjct: 4 IHELSAVLADQIAAGEVVERPASVVKELVENALDAKAAQITIETKEAGLEMIRVTDDGEG 63 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++++ A +RH TSKI +D + T GFRGEALPSI +VS + LM+ + TG Sbjct: 64 IEADDVETAFKRHATSKITSREDLFRVVTLGFRGEALPSIASVSDVVLMTAHAGDETGTT 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G KI S + GT + V DLFF PARL +L S E + ++D++ R+A+++ Sbjct: 124 IHIKGGKIVSNDASQLRNGTQITVSDLFFNTPARLKYLSSLATELSHVSDIVNRLALSHS 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+F + + NGN + S + G + N K + + G P Sbjct: 184 DVAFVLKNNGK---TLLKTAGNGNQKQTFSAIYGVKAAAKMISFNAKDLDFEVDGMVSYP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N + INGR +++ + + Y + +GR+P V+ + +DP DVNVH Sbjct: 241 ELTRSNRNGISLLINGRYIRNFKLTKAVLNGYGSKLMVGRFPYAVINIRLDPLLCDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV-----LSKKMISSFHQDNAPKTHL 355 P K +R + I + I ++++ + ++V + S D K+ Sbjct: 301 PTKQEVRISKEPQLEKLISEGIFARLSQENLIPNAVKNLNHSKRTGFSGEQTDLLEKSPK 360 Query: 356 PKYATSLTNTQE----------------------------KLFLQENRLSTNDLLPSDDP 387 K S T + L++ L D Sbjct: 361 YKGPVSAEVTAALVGESLDDKLDGKQNVLAKDVRPIVISKRTDLEKAELKIWDQKYVQKK 420 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 T +D + ES + Q+H Y+ +++ DGL I+DQHAA ER +E R + Sbjct: 421 TSVKDQEISAESSQKRFPELRYIGQMHGTYLFAESEDGLYIIDQHAAQERCKYEYYRIEI 480 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + Q LL P ++ + I E+ + L LGI+ E FG N +R+ P + Sbjct: 481 GNVSSNQQRLLVPIVLTYPTTDALKIEENLDKLADLGIELEDFGKNTYILRQHPTWFKQG 540 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 +++R++ID ++ T+ E M+C SI++ ++ + LL+++ Sbjct: 541 EEEEIVREMIDMFLNDDK-LTVAKFREKTAIMMSCKRSIKANHHLEEEQAKVLLKKLSTC 599 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N C HGRP + D+E +F R Sbjct: 600 ENPFNCPHGRPVLVHFTSKDMEHMFKR 626 >gi|323350706|ref|ZP_08086367.1| DNA mismatch repair protein HexB [Streptococcus sanguinis VMC66] gi|322123126|gb|EFX94817.1| DNA mismatch repair protein HexB [Streptococcus sanguinis VMC66] Length = 672 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 184/635 (28%), Positives = 301/635 (47%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 28 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKTIQVTDNGE 87 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 88 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATEAGQHGT 147 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 148 LLVAQGGEIEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 207 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 208 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 264 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 265 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 324 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I ++ ++ + ++ + + +T LP Sbjct: 325 HPTKQEVRISKERELMALISQAIATSLKEQDLIPDALENLAKSTVKRATKPEQTSLPLKE 384 Query: 357 -------------------KYATSLTNTQEKLFLQENRLSTN------------------ 379 + S + E + N + Sbjct: 385 NRLYYDKEQNDFFLKPQVAEQQLSFEESAEPIHEATNEKAEPQPTSVKFAERKPVSYDQL 444 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 D D + D +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 445 DHPELDQVSLERAVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERVK 504 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P I + + I + E L GI E +G N +RE Sbjct: 505 YEYYREKIGDVDNSQQQLLVPYIFEFPADDILRIKQRMELLEDAGIFLEEYGANQFILRE 564 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 565 HPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSARD 623 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 624 LLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 658 >gi|325697264|gb|EGD39150.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK160] Length = 672 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 184/635 (28%), Positives = 301/635 (47%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 28 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDNGE 87 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 88 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATEAGQHGT 147 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 148 LLVAQGGEIEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 207 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 208 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 264 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 265 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 324 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I ++ ++ + ++ + + +T LP Sbjct: 325 HPTKQEVRISKERELMALISQAIATSLKEQDLIPDALENLAKSTVKRATKPEQTSLPLKE 384 Query: 357 -------------------KYATSLTNTQEKLFLQENRLSTN------------------ 379 + S + E + N + Sbjct: 385 NRLYYDKEQNDFFLKPQVAEQQLSFEESAEPIHEATNEKAEPQPTSVKFAERKPVSYDQL 444 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 D D + D +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 445 DHPELDQVSLERAVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERVK 504 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P I + + I + E L GI E +G N +RE Sbjct: 505 YEYYREKIGDVDNSQQQLLVPYIFEFPADDILRIKQRIELLEDAGIFLEEYGANQFILRE 564 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 565 HPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSARD 623 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 624 LLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 658 >gi|329115863|ref|ZP_08244580.1| DNA mismatch repair protein, C-terminal domain protein [Streptococcus parauberis NCFD 2020] gi|326906268|gb|EGE53182.1| DNA mismatch repair protein, C-terminal domain protein [Streptococcus parauberis NCFD 2020] Length = 658 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 183/646 (28%), Positives = 318/646 (49%), Gaps = 57/646 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERP+ +KEL+EN++DA+SS++ I G ITDNG Sbjct: 3 KIVELPEVLANQIAAGEVIERPASVVKELVENAIDAKSSQITIEIEESGLKSITITDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++P+++ RH TSKI D I T GFRGEALPSI ++S LT+ S + + G Sbjct: 63 GMSKEDLPLSLLRHATSKIKNQSDLFRIRTLGFRGEALPSIASISLLTIKSATAEADYGN 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ G ++ S+ PV+ GT ++V +LFF PARL ++KS Q E I DV+ R+++A+ Sbjct: 123 QLISKGGEVESIEPVSTPVGTKIKVENLFFNTPARLKYMKSLQAELAHIVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT ++ S + + I+ + G + VE++ + + G+ + Sbjct: 183 PEVAFTLICDGR---ELTKTSGTADLKQAIAGIYGINTAKKMVEISTADLDFEVSGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+VV+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + + I +I +++ + + ++ + ++ + + +T LP A Sbjct: 300 HPTKQEVRISKERELMSLISSAISESLRLQDLIPDALENLAKSTTRNNNKFEQTSLPLQA 359 Query: 360 TSL------------TNTQEKLFLQENR-------------------------------- 375 + N +E+ Q + Sbjct: 360 NKIYYDKEKGDFFTVDNRKEEPSNQPGQSNIVDSGVKIGDQVPPLVEETSPTFSVKHASR 419 Query: 376 -------LSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 + DL S+ ++ + +E E + + Q+H Y+ +Q GL I Sbjct: 420 TISDVDDANHPDLDLSNQKKLTKLIENLENEETSVFPELDYFGQMHGTYLFAQGNGGLFI 479 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 +DQHAA ER+ +E R+ + Q LL P + + + + E + L+++GI E Sbjct: 480 IDQHAAQERVKYEYYREKIGQVDNSLQQLLVPYLFEFSGSDFINLQEKMDLLNQVGIYLE 539 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 +G N +RE P + + I + ++ D ++ ++ +++ + M+C SI++ Sbjct: 540 EYGQNTFILREHPIWMKENEIESGVYEMCDMLLLTNNV-SIKTYRAELAIMMSCKRSIKA 598 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +LL ++ + N C HGRP I +D+EK+F R Sbjct: 599 NHSLDDYSARQLLLQLAQCKNPYNCPHGRPVLINFSKADMEKMFRR 644 >gi|227363259|ref|ZP_03847391.1| DNA mismatch repair protein [Lactobacillus reuteri MM2-3] gi|227071715|gb|EEI10006.1| DNA mismatch repair protein [Lactobacillus reuteri MM2-3] gi|290558719|gb|ADD37853.1| DNA mismatch repair protein HexB [Lactobacillus reuteri] Length = 668 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 180/653 (27%), Positives = 299/653 (45%), Gaps = 64/653 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + NQIAAGE+IERP+ +KEL+ENSLDA S RV+ ++ G ++ D+G Sbjct: 3 KIHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+I +A RH TSKI+ D + T GFRGEALPSI +V+ +TL + G Sbjct: 63 GIAAEDISLAFHRHATSKINSRHDLFKVQTMGFRGEALPSIASVADVTLTTAQAGQEEGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + G K V+P GT ++V DLFF PARL +LKS Q E ITD+I R+A+A Sbjct: 123 MIHLRGGKELVVKPAGARQGTDIKVTDLFFNTPARLKYLKSPQTELTRITDIINRLALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F+F+ ++ + N N + ++ + G +E++ ++ + G+ + Sbjct: 183 PAVAFSFTHNGR---ELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDDFKVSGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + + IN R +++ + I Y + +GRYP+ V+ +++DP VDVNV Sbjct: 240 PELTRASRQYITITINHRYIRNFELTKAIIQGYESKLMVGRYPIAVINIDLDPVLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST------------------------SS 335 HPAK +R + I ++I++ I + + S Sbjct: 300 HPAKREVRLSKEQQLIKLIAETIRQRIAVENLIPDVDADQFIPNDDEVADLDRRLKEASP 359 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ--------------ENRLSTNDL 381 V IS+ T +P + L + + D Sbjct: 360 VYHAAPISAVPATEKAATEIPTPEADNPAHADALDSEIPAPIVIHHLEDLNTPAMQKFDE 419 Query: 382 LPSDDPTYSEDNDPV--------------------EESEATHYQLGIACAQIHQNYIISQ 421 ++ + + PV ++ + + Q+ ++++Q Sbjct: 420 RYQNEGEVTPFSAPVPTMTKKPVKPANIELDVHDKQDQQQNRFPDLQYIGQLQGTFLLAQ 479 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 DGL IVDQHAA ER+ +E RQ Q L P +++ + I +H + L Sbjct: 480 AGDGLYIVDQHAAQERINYEYYRQKIGEVSADQQNFLVPLVLNYSTVDAMTINQHLDTLA 539 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 +G++ E FG N+ +R P + ++ID +I + T+++ M+ Sbjct: 540 AVGLELESFGQNSFILRSHPTWFKEGQEEDTAEEMIDWLIKNGK-LTVKEFRMKTAIMMS 598 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C +I++ + E LL+ + + N C HGRP + D+EK+F R Sbjct: 599 CKRAIKANHHLDEREAKALLKRLPQCENPFNCPHGRPVTVHFNDQDLEKMFKR 651 >gi|296330918|ref|ZP_06873393.1| DNA mismatch repair protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674436|ref|YP_003866108.1| DNA mismatch repair protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296151923|gb|EFG92797.1| DNA mismatch repair protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412680|gb|ADM37799.1| DNA mismatch repair protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 628 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 181/629 (28%), Positives = 311/629 (49%), Gaps = 41/629 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K+ +LS+++ N+IAAGE++ERP+ +KEL+EN++DA+S+ +E I G + ++ DNG Sbjct: 3 KVIQLSDELSNKIAAGEVVERPASVVKELVENAIDADSTVIEIDIEEAGLASIRVLDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +E+ A +RH TSKI D D + T GFRGEALPSI +VSHL + + G Sbjct: 63 GMENEDCKRAFRRHATSKIKDENDLFRVRTLGFRGEALPSIASVSHLEITTST-GEGAGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G I S + GT + V +LFF PARL ++K+ E ITDV+ R+A+A+ Sbjct: 122 KLVLQGGNIISESRSSSRKGTEIVVSNLFFNTPARLKYMKTVHTELGNITDVVNRIALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + + NG+ ++ + G + L+ S + ++GY + Sbjct: 182 PEVSIRLRHHGK---NLLQTNGNGDVRHVLAAIYGTAVAKKMLPLHVSSLDFEVKGYIAL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR +++ ++ + Y +P+GR+P+ + + +DP VDVNV Sbjct: 239 PEITRASRNYMSSVVNGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA--------- 350 HP+K +R T + + I I+ ++ + S+ L K+ + + Sbjct: 299 HPSKLEVRLSKETELHDLIRDGIKDVFKQQQLIPSAQLPKRSAPAIKNEQQFITFDEKPA 358 Query: 351 -----PKTHLPKYAT--------SLTNTQEKL----FLQENRLSTNDLLPSDDPTY---- 389 K P Y+ NT+E+L F + + + + D + Sbjct: 359 ERKVPEKAPAPSYSPMKLSSVVKEPVNTEEELPSAQFDAPPIVDQDQSIEAPDVSEDQPG 418 Query: 390 ----SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 + E + + Q+H YI++Q +GL I+DQHAA ER+ +E R+ Sbjct: 419 ALEQEHHQEEQPEPTSERVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFRE 478 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 + Q ++ P E +I +H ++L +G+ E FG N+ +R PA Sbjct: 479 KVGEVEPEVQDMIVPLTFHYSTNEALIIEQHKQELESVGVFLESFGSNSYIVRCHPAWFP 538 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 K +L+ +II +++DS ++ E M+C GSI++ R +++ E+ LL ++ Sbjct: 539 KGEEAELIEEIIQQVLDSKNID-IKKLREEAAIMMSCKGSIKANRHLRNDEIKALLDDLR 597 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP I ++EK+F R Sbjct: 598 STSDPFTCPHGRPIIIHHSTYEMEKMFKR 626 >gi|157692389|ref|YP_001486851.1| DNA mismatch repair protein [Bacillus pumilus SAFR-032] gi|167017336|sp|A8FDH4|MUTL_BACP2 RecName: Full=DNA mismatch repair protein mutL gi|157681147|gb|ABV62291.1| DNA mismatch repair protein MutL [Bacillus pumilus SAFR-032] Length = 633 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 186/634 (29%), Positives = 312/634 (49%), Gaps = 46/634 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS+ + N+IAAGE++ERP+ +KEL+EN++DA S+ VE + G S ++ DNG Sbjct: 3 KIIQLSDDLSNKIAAGEVVERPASVVKELMENAIDASSTVVEIDVEEAGLSSIRMIDNGV 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+ +A QRH TSKI D D + T GFRGEALPSI +VSHL + + G Sbjct: 63 GIDAEDCKLAFQRHATSKIKDENDLFRVRTLGFRGEALPSIASVSHLEMKTST-GEGAGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G KI S + + GT + V +LF+ PARL ++K+ E I+DV+ R+A+A+ Sbjct: 122 HLVLQGGKIISEKKTSGRRGTEIVVTNLFYNTPARLKYMKTVHTELGNISDVVNRIALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + + NG+ ++ + G V L+ +S + ++GY + Sbjct: 182 PEVSIRLRHQGK---VLLQTNGNGDVRHVLAAIYGTAVAKKMVPLHVQSLDFEVKGYISL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR V+ ++ + Y +P+GR+P+ + +++DP VDVNV Sbjct: 239 PEVTRASRNYMSSVVNGRYVKHFPLVKAVHEGYHTLLPIGRHPITFIEMKMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-------NAPK 352 HP+K +R + I Q I+ K+ + S+ + KK ++ +A K Sbjct: 299 HPSKLEVRLSKEQELHELIKQGIKDVFQKQQLIPSASVPKKAPMPAIKNEQQSLTFDAKK 358 Query: 353 THLPKYATSLTNTQEKL---------------FLQENRLSTNDLLPSDDPTYSEDNDPVE 397 + + T L+ E L +QE +++ + D P+ + Sbjct: 359 GNTNEMETPLSYEPEPLESVVYETNQMSTYGMPVQEMTGASSPVFREDAPSERVHKEESA 418 Query: 398 E-----------------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 SE + Q+H YI++Q GL I+DQHAA ER+ + Sbjct: 419 ASLEYEESVLREDDAEAISENERVPVMYPIGQMHGTYILAQNERGLYIIDQHAAQERIKY 478 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 E R+ + Q +L P + + +I EH E L ++G+ E FG + +R Sbjct: 479 EYYREKVGEIEQEVQEMLVPLTFHYSKNDMLIIEEHKEILTKVGVFLEPFGSGSYIVRSH 538 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 P K +L+ +II++++ ++ E M+C GSI++ R +++ E+ L Sbjct: 539 PQWFPKGEEAELIEEIIEQVLVEKRVD-IKKLREEAAIMMSCKGSIKANRHLRNDEIKAL 597 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L E+ + + C HGRP I ++EK+F R Sbjct: 598 LDELRQTKDPFTCPHGRPIIIHHSTYEMEKMFKR 631 >gi|328944744|gb|EGG38905.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1087] Length = 688 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 185/635 (29%), Positives = 300/635 (47%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 44 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDNGE 103 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 104 GIDYEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATEAGQHGT 163 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 164 LLVAQGGEIEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 223 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 224 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 280 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 281 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 340 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I ++ ++ + ++ + + +T LP Sbjct: 341 HPTKQEVRISKERELMALISQAIATSLKEQDLIPDALENLAKSTVKRATKPEQTSLPLKE 400 Query: 357 ---------------------------KYATSLTNTQEKLFLQENRLSTN---------- 379 NT EK Q + Sbjct: 401 NRLYYDKEQNDFFLKPQVAEQQLSFEESVGPVQANTDEKAEPQPTSVKFAERKPASYDQL 460 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 D D + D +++ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 461 DHPELDQASLERAVDKLKQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERVK 520 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P I + + I + E L GI E +G N +RE Sbjct: 521 YEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRMELLEDAGIFLEEYGANQFILRE 580 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 581 HPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSARD 639 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 640 LLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 674 >gi|332365450|gb|EGJ43211.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK355] Length = 649 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 182/636 (28%), Positives = 299/636 (47%), Gaps = 47/636 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 4 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKTIQVTDNGE 63 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 64 GIDHQDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATEAGQHGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 124 RLVAQGGEIEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 184 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ ++ ++IDP DVNV Sbjct: 241 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAIINIQIDPYLADVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS------------------------ 335 HP K +R + I Q+I ++ ++ + + Sbjct: 301 HPTKQEVRISKERELMALISQAIVTSLKEQDLIPDALENLAKSTVKRVTKPEQITLPLKE 360 Query: 336 ---------------VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTND 380 + SF + P L + F + S + Sbjct: 361 NRLYYDKEQNDFFLKPQVAEQQLSFEESAEPGHEATDEKAELPQSTSVKFAERKPASYDQ 420 Query: 381 LLPS--DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L D + D +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 421 LDHPELDQASLERVVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E R+ + Q LL P I + + I + E L GI E +G N +R Sbjct: 481 KYEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRMELLEDAGIFLEEYGANQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 541 EHPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 DLLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 635 >gi|121611141|ref|YP_998948.1| DNA mismatch repair protein MutL [Verminephrobacter eiseniae EF01-2] gi|121555781|gb|ABM59930.1| DNA mismatch repair protein MutL [Verminephrobacter eiseniae EF01-2] Length = 687 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 210/672 (31%), Positives = 333/672 (49%), Gaps = 82/672 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L E++I+QIAAGE++ERP+ ++EL++N+LDA +++V ++ GG + D+G Sbjct: 17 PIRDLPEELISQIAAGEVVERPASVVRELLDNALDAGATQVTVRLSAGGVRLIAVEDDGS 76 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+ +A++RH TSKIS D + T GFRGEAL +I +VS L+L+SRP + Sbjct: 77 GIAQDELAVALRRHATSKISSLSDLETVATMGFRGEALAAIASVSELSLLSRPAAQASAF 136 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ RP A + GT VEV++LFF+ PAR FLK++ E + +RR A+A Sbjct: 137 VLDARSGEL---RPAARSTGTTVEVKELFFSTPARRKFLKADATELAHCLESVRRHALAR 193 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN------FPERISQVIGEDFINNAVELNEKSNEITL 233 P V F + G R+S V+G DF+ +V L + +T+ Sbjct: 194 PDVGFAVWHDGKLVEQWRASFVPGQGDARDALARRLSDVLGADFVAQSVALQHRGGSVTV 253 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G+ G+P R A+ Y ++NGR V+DK I R+AY + + + PV VL LEIDP Sbjct: 254 TGHAGLPDAARARADHQYCYVNGRFVRDKVISHAARSAYEDVLHGHKQPVYVLYLEIDPA 313 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ------------------------------ 323 +VDVNVHP K +RFR+ + + +++ Sbjct: 314 RVDVNVHPTKIELRFRDSREVHQAVRHAVENALATPRAAALAAAEAGAAVTAAKQPQAHA 373 Query: 324 -------------------KAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTN 364 +A+ + S P+ A L+ Sbjct: 374 WRAQSALRLEERGHHVADLQALWGPKKDPPPDSGQAHGQSSEPWAGPRLAQRAPAPPLSP 433 Query: 365 --------------------TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV-EESEATH 403 +QE+ + ++ S D E P+ +E + Sbjct: 434 AGTAARDIGTEAQRPTLPPGSQEQGHALPSGREGQEVARSLDQEGREAAWPLGQEGQEVA 493 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-KITSQTLLTPEI 462 + LG A AQIH YI+++ G+VIVD HAAHER+++E+++ +S ++ SQ LL P Sbjct: 494 WPLGRAVAQIHGVYILAENAQGMVIVDMHAAHERIVYERLKAQLDSGARMASQPLLIPGT 553 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 E A E E L LG++ F P +A+R +PA+L++ + +L R ++ E+ Sbjct: 554 FAATAEEVATAEESAEVLATLGLEVIPFSPKTLAVRAVPAVLAQGDAVELARSVLAELAA 613 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 T+ +Q +L TMAC+G++R+ R + EMN LLR+ME S QCNHGRPT+ + Sbjct: 614 HDTSTVVQRARNELLGTMACHGAVRANRHLTIDEMNALLRQMEATERSDQCNHGRPTWRQ 673 Query: 583 LKLSDIEKLFGR 594 L + +++ LF R Sbjct: 674 LSMKELDALFLR 685 >gi|138894827|ref|YP_001125280.1| DNA mismatch repair protein [Geobacillus thermodenitrificans NG80-2] gi|166232089|sp|A4IMI1|MUTL_GEOTN RecName: Full=DNA mismatch repair protein mutL gi|134266340|gb|ABO66535.1| DNA mismatch repair protein MutL [Geobacillus thermodenitrificans NG80-2] Length = 645 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 180/646 (27%), Positives = 303/646 (46%), Gaps = 58/646 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I KL +++ N+IAAGE++ERP+ +KEL+EN++DA S+ VE + G + ++ DNG Sbjct: 3 RIHKLDDQLANKIAAGEVVERPASVVKELVENAIDAHSTAVEIELEEAGMTKIRVIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ +A +RH TSKI D D I T GFRGEALPSI +VS + L++ + G Sbjct: 63 GMEEEDCLLAFERHATSKIQDEHDLFRIRTLGFRGEALPSIASVSEVELVTST-GSGPGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G + + A GT + V +LFF PARL ++K+ E DV+ R+A+A+ Sbjct: 122 KLVLKGGALVARERAAGRKGTDITVSNLFFNTPARLKYMKTIHTELGHAADVVNRLALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF + + +G+ ++ + G + + + +S + T++GY + Sbjct: 182 PDVSFRLRHHGK---TLLATNGSGDVRHVLAAIYGMETAKQMIPIEAESLDFTVRGYISL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR V++ ++ I Y +P+GRYP+V L +E+DP VDVNV Sbjct: 239 PEVTRASRNYMSLIVNGRYVRNIPLMKAIEAGYHTLLPIGRYPIVFLAIEMDPVLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD----NAPKTHL 355 HPAK +RF + I +I++A ++ + S K + + + A + H Sbjct: 299 HPAKLEVRFSKEAELNELITATIRQAFRQRTLIPSVSADSKTVKAKAEQASWTFAHRVHE 358 Query: 356 PKYATS----------------------------------LTNTQEKLFLQENRLS---- 377 P ++ E E R Sbjct: 359 PPAQPDGKAEGTSDVTAAASLASEGSLSPLPAAAQADAPAVSEEAEASVFSERRTGVVND 418 Query: 378 ------TNDLLPSDDPTYSEDNDPVEESEAT---HYQLGIACAQIHQNYIISQTTDGLVI 428 D ++PT + + E Q+H YI+++ GL + Sbjct: 419 LPAAELKRDAEVEEEPTEACLPADEQAEEKRAVDRLPPLYPIGQLHGTYILAENEHGLYM 478 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 +DQHAA ER+ +E R+ Q LL P + E I ++L R G+ E Sbjct: 479 IDQHAAQERINYEYFREKLGEVTNEVQELLVPLTFEYPADEYERIAACRDELARCGVFLE 538 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 FGP A +R P K +++ ++I+ ++ + T ++ E M+C +I++ Sbjct: 539 PFGPRAFLVRSHPVWFPKGKEKEIIEEMIEHVLTAKTVD-IKQLREQAAIVMSCKRAIKA 597 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +++ E+ LL + + + C HGRP + +IEKLF R Sbjct: 598 NQHLRTDEIFALLETLRQTTDPFTCPHGRPIIVHFSTYEIEKLFKR 643 >gi|223043270|ref|ZP_03613317.1| DNA mismatch repair protein MutL [Staphylococcus capitis SK14] gi|222443481|gb|EEE49579.1| DNA mismatch repair protein MutL [Staphylococcus capitis SK14] Length = 655 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 171/656 (26%), Positives = 315/656 (48%), Gaps = 68/656 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA+S+ + + G S ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAKSTEINIEVEQSGISSIRVVDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + RH TSK+ DD +I T GFRGEAL SI +VS +TL + N G Sbjct: 63 GIEQDDLSLVFHRHATSKLDVDDDLFHIRTLGFRGEALASISSVSKVTLKTCT-DNENGF 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EVYAENGEIVNRKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + + + + +G E ++++ G + V ++ +++ L+G+ Sbjct: 182 PDIRISLLSDGK---TLISTNGSGRTNEVMAEIYGMRVAKDLVHISGDTSDYHLEGFFAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GRYP+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFILNKAILEGYHTLLTIGRYPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----KMISSFHQDN----- 349 HP K +R + + I++ I++A + + + L + K++ SF Q Sbjct: 299 HPTKLEVRLSKEDQLYDLIVEKIREAFKDRILIPQNDLDRTPKKNKVLKSFEQQKMDFEK 358 Query: 350 -------------APKTHLPKYATSLTNTQE------------KLFLQENRLSTNDLLPS 384 P ++ Y T+ + +E E +++++ S Sbjct: 359 RNSEVTNDDLTTAHPSSNKDHYNTNDSEIREGINNYQDTNTTLSNHENEQGFTSHNIQRS 418 Query: 385 DDPTYSEDNDPV--------------------------EESEATHYQLGIACAQIHQNYI 418 ++ YS+ + + Q+H YI Sbjct: 419 EEDNYSQVQKDILNDMEDDYLLNTESTSNNEEDIKGTVSQDPKRRVPYMEVVGQVHGTYI 478 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 I+Q +G+ ++DQHAA ER+ +E R Q LL P + E +I ++ + Sbjct: 479 IAQNENGMFMIDQHAAQERIKYEYFRDKIGEVSNDVQNLLIPLTFHFSKDEQMIIDQYID 538 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +L ++GI E FG + + P K ++++D+I+ ++++ ++ E+ Sbjct: 539 ELDKVGIHLEHFGGHDYIVNSYPVWFPKAEAQEIIKDMIELVLENKKVD-VKKIREDAAI 597 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C SI++ +++ EM+ L+ ++ + + C HGRP I ++EKLF R Sbjct: 598 MMSCKKSIKANHYLKNNEMSDLIDQLREAEDPFTCPHGRPIIINFSNYELEKLFKR 653 >gi|332365310|gb|EGJ43073.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1059] Length = 689 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 185/636 (29%), Positives = 305/636 (47%), Gaps = 47/636 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 44 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDNGE 103 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 104 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATEAGQHGT 163 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 164 LLVAQGGEIEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 223 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +G+ + I+ + G VE++ + + GY + Sbjct: 224 PEVAFTLISDGREMTR---TAGSGDLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 280 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 281 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 340 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+I ++ ++ + ++ + + +T LP Sbjct: 341 HPTKQEVRISKERELMALISQAIATSLKEQDLIPDALENLAKSTVKRATKPEQTSLPLKE 400 Query: 360 TSLTNTQE------KLFLQENRLSTNDLLPSDDPTYSEDNDP------------------ 395 L +E K + E +LS + + E ++P Sbjct: 401 NRLYYDKEQDDFFLKPHVSEQQLSFEESAETVHEAADEKSEPPQPTSVKFAERKPASYDQ 460 Query: 396 -----------------VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 461 LDHPELDQASLERAVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERV 520 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E R+ + Q LL P I + + I + E L GI E +G N +R Sbjct: 521 KYEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRMELLEDAGIFLEEYGANQFILR 580 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 581 EHPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSAR 639 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 640 DLLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 675 >gi|324992651|gb|EGC24572.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK405] gi|327460054|gb|EGF06393.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1] gi|327488644|gb|EGF20444.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1058] Length = 688 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 183/635 (28%), Positives = 300/635 (47%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 44 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEDAGLKSIQVTDNGE 103 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS + + G Sbjct: 104 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFIIETATEAGQHGT 163 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 164 LLVAQGGEIEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 223 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 224 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 280 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 281 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 340 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I ++ ++ + ++ + + + +T LP Sbjct: 341 HPTKQEVRISKERELMALISQAIATSLKEQDLIPDALENLAKSTVKRANKPEQTSLPLKE 400 Query: 357 -----------------------KYATSLTNTQEKLFLQENRLSTN-------------- 379 + S E + T+ Sbjct: 401 NRLYYDKEQNDFFLKPQVAEQQLSFEESAEPVHEATDEKAESQPTSVKFAERKLASYDQL 460 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 D D + D +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 461 DQPELDQASLERAVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERVK 520 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P I + + I + E L GI E +G N +RE Sbjct: 521 YEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRMELLEDAGIFLEEYGANQFILRE 580 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 581 HPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSARD 639 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 640 LLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 674 >gi|331701279|ref|YP_004398238.1| DNA mismatch repair protein mutL [Lactobacillus buchneri NRRL B-30929] gi|329128622|gb|AEB73175.1| DNA mismatch repair protein mutL [Lactobacillus buchneri NRRL B-30929] Length = 643 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 168/631 (26%), Positives = 297/631 (47%), Gaps = 45/631 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I KL + NQIAAGE++ERP+ +KEL+ENS+DA+SS ++ + G ++ D+G G Sbjct: 7 IHKLPTILSNQIAAGEVVERPASVVKELVENSIDAKSSEIDVTVENSGLKLIKVVDDGNG 66 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + S ++ A RH TSKIS+ D + T GFRGEALPSI +V+++ + + + G + Sbjct: 67 IDSSQVQTAFLRHATSKISEQRDLFRVRTLGFRGEALPSISSVANVRMKTST--GSIGTE 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G K+ + + GT VEV LF+ PARL +L S E + I+D++ R+A+++P Sbjct: 125 VEYKGGKLVTQKASESRKGTTVEVASLFYNTPARLKYLSSPNTELSKISDIVNRLALSHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++F+F + ++ S G+ + + + G ++ + +I + GY +P Sbjct: 185 EIAFSFISNGR---ELLRTSGRGDLRQVLGAIYGVKTVSKMAAIKGNDLDIKVSGYVSLP 241 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + N + +NGR +++ + + Y + +GR+P+ V+ ++ DP +DVNVH Sbjct: 242 ELTRSSRNYISLILNGRFIRNFPLTKAVIAGYGSKLMIGRFPIAVINIDADPALIDVNVH 301 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV----------------------LS 338 P K +R + +I I +I + K + + + Sbjct: 302 PTKQEVRISDEPMIGKLIANAIYDMLRDKQLIPDATRDFKQPVQAAPRQFDVSTATQAQT 361 Query: 339 KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE---------------NRLSTNDLLP 383 + + P P+ + T++ L + Sbjct: 362 NPPLFAVDTPTTPSISQPEVTPVVVKTRDDLASSQVAQFDDFLKNEPSGLPAFEGTQPKT 421 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 D+ S + E T + QIH Y++++T D + +VDQHAA ER+ +E Sbjct: 422 IDNHQPSAKPEQSELVVETGFPHLDYIGQIHGTYLVAETADNMYLVDQHAAQERINYEFY 481 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 R+ Q LL P ++D + +I + + L +LGI E FG N+ +RE P Sbjct: 482 RKQIGEVSDDQQKLLVPIVLDYSTSDFLMISDRLDLLDKLGIHLEPFGQNSFIVREHPMW 541 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 ++++ID I+ S ++ E M+C +I++ + ++ LL+ Sbjct: 542 FKAGQEEDTIKEMIDWIL-SDHKISVAAFREKTAIMMSCKRAIKANHHLDELQAKALLKR 600 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + N C HGRP +K DIEK+F R Sbjct: 601 LPECENPYNCPHGRPVLVKFTNEDIEKMFKR 631 >gi|148543761|ref|YP_001271131.1| DNA mismatch repair protein [Lactobacillus reuteri DSM 20016] gi|184153167|ref|YP_001841508.1| DNA mismatch repair protein [Lactobacillus reuteri JCM 1112] gi|325682133|ref|ZP_08161651.1| DNA mismatch repair protein HexB [Lactobacillus reuteri MM4-1A] gi|167017343|sp|A5VIX0|MUTL_LACRD RecName: Full=DNA mismatch repair protein mutL gi|229486324|sp|B2G6E6|MUTL_LACRJ RecName: Full=DNA mismatch repair protein mutL gi|148530795|gb|ABQ82794.1| DNA mismatch repair protein MutL [Lactobacillus reuteri DSM 20016] gi|183224511|dbj|BAG25028.1| DNA mismatch repair protein HexB [Lactobacillus reuteri JCM 1112] gi|324978777|gb|EGC15726.1| DNA mismatch repair protein HexB [Lactobacillus reuteri MM4-1A] Length = 668 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 180/653 (27%), Positives = 299/653 (45%), Gaps = 64/653 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + NQIAAGE+IERP+ +KEL+ENSLDA S RV+ ++ G ++ D+G Sbjct: 3 KIHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+I +A RH TSKI+ D + T GFRGEALPSI +V+ +TL + G Sbjct: 63 GIAAEDISLAFHRHATSKINSRHDLFKVQTMGFRGEALPSIASVADVTLTTAQAGQEEGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + G K V+P GT ++V DLFF PARL +LKS Q E ITD+I R+A+A Sbjct: 123 MIHLRGGKELVVKPAGARQGTDIKVTDLFFNTPARLKYLKSPQTELTRITDIINRLALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F+F+ ++ + N N + ++ + G +E++ ++ + G+ + Sbjct: 183 PAVAFSFTHNGR---ELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDDFKVSGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + + IN R +++ + I Y + +GRYP+ V+ +++DP VDVNV Sbjct: 240 PELTRASRQYITITINHRYIRNFELTKAIIQGYESKLMVGRYPIAVINIDLDPVLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST------------------------SS 335 HPAK +R + I ++I++ I + + S Sbjct: 300 HPAKREVRLSKEQQLIKLIAETIRQRIAVENLIPDVDADQFIPNDDEVADLDRRLKEASP 359 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ--------------ENRLSTNDL 381 V IS+ T +P + L + + D Sbjct: 360 VYHAAPISAVPATEKAATEIPTPEADNPAHADALDSEIPAPIVIHHLEDLNTPAMQKFDE 419 Query: 382 LPSDDPTYSEDNDPV--------------------EESEATHYQLGIACAQIHQNYIISQ 421 ++ + + PV ++ + + Q+ ++++Q Sbjct: 420 RYQNEGEVTPFSAPVPTMTKKPVKPANIELDVHDKQDQQQNRFPDLQYIGQLQGTFLLAQ 479 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 DGL IVDQHAA ER+ +E RQ Q L P +++ + I +H + L Sbjct: 480 AGDGLYIVDQHAAQERINYEYYRQKIGEVSADQQNFLVPLVLNYSTVDAMTINQHLDTLA 539 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 +G++ E FG N+ +R P + ++ID +I + T+++ M+ Sbjct: 540 AVGLELESFGQNSFILRSHPTWFKEGQEEDTAEEMIDWLIKNGK-LTVKEFRMKTAIMMS 598 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C +I++ + E LL+ + + N C HGRP + D+EK+F R Sbjct: 599 CKRAIKANHHLDEREAKALLKRLPQCENPFNCPHGRPVTVHFNDQDLEKMFKR 651 >gi|319946047|ref|ZP_08020296.1| DNA mismatch repair protein HexB [Streptococcus australis ATCC 700641] gi|319747855|gb|EFW00100.1| DNA mismatch repair protein HexB [Streptococcus australis ATCC 700641] Length = 649 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 182/637 (28%), Positives = 311/637 (48%), Gaps = 48/637 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L E + NQIAAGE+IERP+ +KEL+ENS+DA +S++ I G QITDNG Sbjct: 3 QIIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIVVEIEEAGLKSIQITDNGQ 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+ +A++RH TSKI D I T GFRGEALPSI +VS +T+++ + G Sbjct: 63 GIAHEEVELALRRHATSKIKSQADLFRIRTLGFRGEALPSIASVSVMTILTAQEGASHGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G +I+S+ P GT + V DLFF PARL ++KS+Q E + I D++ R+++A+ Sbjct: 123 KLEAKGGEITSLEPATSPVGTKITVEDLFFNTPARLKYMKSQQAELSHIVDILNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT + + GN + I+ V G V + + + G+ + Sbjct: 183 PEIAFTLINDGHEMTR---TAGTGNLRQAIAGVYGLATAKKMVAIETGDLDFEVSGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N +FINGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVINIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I A+ ++ + ++ + + + +T LP Sbjct: 300 HPTKQEVRISKERELMALISQAIVSALKEQDLIPDALENLAKSTLRRTEKPVQTSLPLKE 359 Query: 357 ---------------------KYATSLTNTQEKLFLQE--NRLSTNDLLPSDDPTYSEDN 393 + + LT Q LF E N+ + + + + + + Sbjct: 360 NSLYYDRDKGDFFVRPEVAESQPSGELTPEQTVLFASEEGNQEAKSPAIKFAERKAPQYD 419 Query: 394 ----------------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 D +E E + + Q+H Y+ +Q GL I+DQHAA ER Sbjct: 420 QLDHPELDLASLDKAYDKLEGEEHSTFPELEYFGQMHGTYLFAQGNGGLYIIDQHAAQER 479 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 + +E+ R+ + Q LL P I + + + + L +G+ E +G N + + Sbjct: 480 VKYEEYRESIGDVDGSQQQLLVPYIFEFPADDLIRLQQRKHLLEEVGVYLEEYGANQLIL 539 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 RE P + ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 540 REHPIWMKEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHTLDDYSA 598 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L+ ++ + N C HGRP + SD+EK+F R Sbjct: 599 RDLIYQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 635 >gi|116627019|ref|YP_819638.1| DNA mismatch repair protein [Streptococcus thermophilus LMD-9] gi|122268376|sp|Q03MY0|MUTL_STRTD RecName: Full=DNA mismatch repair protein mutL gi|116100296|gb|ABJ65442.1| DNA mismatch repair protein MutL [Streptococcus thermophilus LMD-9] Length = 647 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 179/635 (28%), Positives = 308/635 (48%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE++ERP+ +KEL+EN++DA S+++ + G S QITDNG Sbjct: 3 KIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ M+++RH TSKI + D I T GFRGEALPSI ++SHLT+++ G Sbjct: 63 GMAQADVAMSLRRHATSKIKNQGDLFRIRTLGFRGEALPSIASISHLTIVTAADGEVYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G +I S P++ GT + V +LF+ PARL ++KS Q E I DV+ R+++A+ Sbjct: 123 KLVAKGGEIESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT ++ S G+ + I+ + G VE++ + + GY + Sbjct: 183 PEVAFTLLNDGR---QLTQTSGTGDLRQAIAGIYGLTTAKKMVEISNSDLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAIFDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I +I +++ ++ + ++ + S+ + +T LP Sbjct: 300 HPTKQEVRISKEKELMALIKSAIAQSLREQDLIPDALENLAKSSTRGATRSVQTSLPLKQ 359 Query: 360 TSL----------------------------------TNTQEKLFLQENRLSTND----- 380 T+L N Q+ Q R + + Sbjct: 360 TNLYYDSSRNDFFVTPETVQEDIKPLVSKSESSVSSVANKQQPTVKQAKRSADDSDSEHG 419 Query: 381 -LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 L + + + E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 KLDYKNKSKLKRMLENLTNEETSTFPELEFFGQMHGTYLFAQGQGGLYIIDQHAAQERVK 479 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P + + + + E L+++ I E +G N +RE Sbjct: 480 YEYYREKIGVVDSSLQQLLVPYLFEFSGSDYISLQEKMPLLNQVCIYLEPYGNNTFILRE 539 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P + ++ I + ++ D ++ ++ +++ + M+C SI++ + Sbjct: 540 HPIWMKEEEIESAVYEMCDMLLLTNEV-SVKTYRAELAIMMSCKRSIKANHALDDYSARD 598 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 599 LLVQLAQCKNPYNCPHGRPVLVNFTKSDMEKMFRR 633 >gi|301301379|ref|ZP_07207521.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300214788|gb|ADJ79204.1| DNA mismatch repair protein mutL [Lactobacillus salivarius CECT 5713] gi|300851039|gb|EFK78781.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 659 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 183/649 (28%), Positives = 308/649 (47%), Gaps = 61/649 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE++ERP+ +KEL+ENS+DA + +++ +I G QI D+G Sbjct: 3 KIHELSEILANQIAAGEVVERPASVVKELVENSIDAGAKQIDIIIEDAGLKSIQIIDDGN 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ A +RH TSKI D D +HT GFRGEALPSI +VS + + + G Sbjct: 63 GIEAEDVETAFKRHATSKIIDRKDLFKVHTLGFRGEALPSIASVSDVVMETAVSG-RAGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G ++ A GT + V DLF+ PARL +LKS Q E + I+D++ R+A+++ Sbjct: 122 KIHIKGGEVLEKTLSASREGTTITVSDLFYNTPARLKYLKSVQTELSYISDIVNRLALSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V+ + + ++ + NGN + I + G V+ + + + + GYT + Sbjct: 182 TDVALSLTNNGR---QLLQSAGNGNLQQTIGAIYGVQNARQMVKFEDANLDFKISGYTSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR V++ + + Y + GRYP+ VL +E+DP VDVNV Sbjct: 239 PKLTRASRNYISLLVNGRYVKNFQLTKAVIEGYGSKLMTGRYPITVLSIELDPTLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------QDN 349 HP K I+ + FI ++I + I ++ + + + K + + Sbjct: 299 HPTKQEIKISKEDELVTFIQKTIFERIGQENLIPDGLQNIKSKTKEKLDFEQLKVGLNEA 358 Query: 350 APKTHLPKYATSLTNT------------------------------------QEKLFLQE 373 + + ++ T +T+ ++K L+ Sbjct: 359 SKQYQTKQHRTGITSEVTAALVGEKLTKDESQTQNNEKIKEETKVELSPIIIKDKQDLKS 418 Query: 374 NRLSTNDLLPSDDPTYSEDNDPVEES--------EATHYQLGIACAQIHQNYIISQTTDG 425 R+ D +E EE+ + + Q+H ++ ++ +G Sbjct: 419 YRVKEWDEKYQSRNKETEVTSIAEENRSVDDERKDTQRFPTLRYIGQMHGTFLFAEGEEG 478 Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L IVDQHAA ER+ +E R++ T Q LL P ++ + +I E+ + L LGI Sbjct: 479 LYIVDQHAAQERVKYEYYREEIGKVSPTQQNLLVPIVLTYPTTDALIIDENMDKLKELGI 538 Query: 486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 E FG N IRE P + ++R++ID + ++ E M+C S Sbjct: 539 YLEDFGQNTYIIREHPTWFKEGQEESIIREMIDYFL-KDRKLSIAKFREKTAIMMSCKRS 597 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 I++ + + +L +++ N C HGRP +KL D+E +F R Sbjct: 598 IKANHHLDDKQAKSILEQLKTCENPFNCPHGRPVLVKLSNKDLEHMFKR 646 >gi|254168392|ref|ZP_04875237.1| DNA mismatch repair protein MutL [Aciduliprofundum boonei T469] gi|197622673|gb|EDY35243.1| DNA mismatch repair protein MutL [Aciduliprofundum boonei T469] Length = 574 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 185/594 (31%), Positives = 312/594 (52%), Gaps = 42/594 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L I+ +IAAGE++ERP+ +KEL+ENS+DA ++++ + GGG ++ D+G G Sbjct: 19 IRVLPPNIVEKIAAGEVVERPASVVKELVENSIDAGATKIAIHVEGGGTKRIRVVDDGCG 78 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ E+ +A++RH TSKI +D + I T GFRGEALPSI AVS LT++++ ++ G + Sbjct: 79 MSEEDAILALKRHATSKIKSEEDLNRISTLGFRGEALPSIAAVSKLTIITKRKEDLVGTK 138 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G +I ++ + GT V V DLF+ PAR FLKSE+ E I ++ + AI Y Sbjct: 139 IHVEGGEIKNITSIGAPSGTSVLVEDLFYNTPARRKFLKSERSEFFQIYSIVEKYAIIYE 198 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F + + N RI+++ G++ + VE+ + N + ++G P Sbjct: 199 NIHFKLVHNGKEVFNLPP----SNLKARIARLWGKEIADAMVEIKKS-NRMKIKGLIAKP 253 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + N+ +F+NGR V+ + I + Y + YP+ +L ++++P ++DVNVH Sbjct: 254 YQVRRDKNKLLIFVNGRYVKSRIIEDALVEGYGTLLFRDSYPIAILKIQVEPDEIDVNVH 313 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +++F++ I+ I I ++ K+ S + ++ Sbjct: 314 PAKLFVKFKDENRIKKEIANLIWNSLTKEENIPSKIGGRE-------------------- 353 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 EK+ ++ + D+ ED PV Q+ YII Sbjct: 354 ---ERAEKIKIEREKQMVFDVEEPSKMRKIEDFIPV-----MRTLPMEILGQVDGTYIIL 405 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 ++ +GLVIVDQHAAHER+ +E+ +D I LL P I++L E I+E L Sbjct: 406 KSPEGLVIVDQHAAHERIRYERFLKDMKDRNIQ--KLLEPIILNLDYKEYQFILEQKGSL 463 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 G E FG N+I +R IP IL+K++ +R+I ++ ++ + ++ + Sbjct: 464 RDYGFIIEDFGTNSIVVRGIPPILTKRDAEDAIREIAQL-----GPKSIDEKRDELIKLI 518 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C G+I++ +K+ EM +L+ ++ + N C HGR T IK+K D+EK+F R Sbjct: 519 SCKGAIKAHQKLSQFEMEKLIMDLLRCKNPYTCPHGRSTMIKIKNEDLEKMFKR 572 >gi|157151210|ref|YP_001451301.1| DNA mismatch repair protein [Streptococcus gordonii str. Challis substr. CH1] gi|189030419|sp|A8AZU1|MUTL_STRGC RecName: Full=DNA mismatch repair protein mutL gi|157076004|gb|ABV10687.1| DNA mismatch repair protein hexB [Streptococcus gordonii str. Challis substr. CH1] Length = 647 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 183/635 (28%), Positives = 304/635 (47%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 3 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKTIQVTDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 63 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATENGQHGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 123 LLVAQGGEIEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 183 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I ++ ++ + ++ + + +T LP Sbjct: 300 HPTKQEVRISKERELMALISQAIAASLKEQDLIPDALENLAKSTVKRATKPEQTSLPLKE 359 Query: 357 -------------------KYATSLTNTQEKLF---------------LQENRLSTNDLL 382 + S + E + E + ++ D L Sbjct: 360 NRLYYDKERNDFFLKPQVAEQQISFEESAEPIHEATDEKAEPQPTSVKFAERKPASYDQL 419 Query: 383 PSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 + + D +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 DHPELNQASLERAVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERVK 479 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P I + + I + + L GI E +G N +RE Sbjct: 480 YEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRMKLLEDAGIFLEEYGANQFILRE 539 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 540 HPIWFKEEEIEDGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHGLDDYSARD 598 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 599 LLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 633 >gi|239636984|ref|ZP_04677978.1| DNA mismatch repair protein MutL [Staphylococcus warneri L37603] gi|239597334|gb|EEQ79837.1| DNA mismatch repair protein MutL [Staphylococcus warneri L37603] Length = 649 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 177/650 (27%), Positives = 308/650 (47%), Gaps = 62/650 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA+S+ + + G + ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAQSTEINIEVEQSGVASIRVVDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ + RH TSK+ DD +I T GFRGEAL SI +VS +TL + N G Sbjct: 63 GIEADDLSLVFHRHATSKLDADDDLFHIRTLGFRGEALASISSVSKVTLRTCT-DNENGH 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYAENGEIINQKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + + K N +G E ++++ G + V + +++ L+GY Sbjct: 182 PDIRISLVSDGKTLLKTN---GSGKTNEVMAEIYGMKVAKDLVHITGDTSDYHLEGYVAR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GRYP+ + +++DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFVLNKAIVEGYHTLLTIGRYPICYINIQMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----KMISSFHQ-----DN 349 HP K +R + + I++ I++A K + + L K+++SF Q + Sbjct: 299 HPTKLEVRLSKEEQLYDLIVEKIREAFKDKILIPKNDLDHHPKKNKVLNSFEQQKLDFER 358 Query: 350 APKTHLPKYATSLTNTQEKLFL------------QENRLSTNDLLPSDDPTYSEDNDP-- 395 + +S QE L Q N + + L +D Sbjct: 359 KQNEVQNRPQSSEDERQEDLSATTLDKVENQNISQVNEDNESTLFNDSQYIKRNHDDHYF 418 Query: 396 -------------------------------VEESEATHYQLGIACAQIHQNYIISQTTD 424 V S Q+H YII+Q + Sbjct: 419 NNQKDILNELDNQNETLEQEENQNENDIKGTVSASTRRRVPYMEVVGQVHGTYIIAQNEN 478 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 G+ ++DQHAA ER+ +E R+ Q LL P + E +I ++ E+L R+G Sbjct: 479 GMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPMTFHFSKDEQFIIDQYQEELDRVG 538 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 + E FG + + P K ++++D+I+ ++++ ++ E+ M+C Sbjct: 539 VHLEHFGGHDYIVNSYPVWFPKAEAEEIIKDMIELVLENKKID-VKKMREDAAIMMSCKK 597 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ +++ EM L+ ++ + + C HGRP I ++EKLF R Sbjct: 598 SIKANHYLKNNEMADLIDQLREMEDPFTCPHGRPIIINFSNYELEKLFKR 647 >gi|229915837|ref|YP_002884483.1| DNA mismatch repair protein MutL [Exiguobacterium sp. AT1b] gi|259509933|sp|C4L192|MUTL_EXISA RecName: Full=DNA mismatch repair protein mutL gi|229467266|gb|ACQ69038.1| DNA mismatch repair protein MutL [Exiguobacterium sp. AT1b] Length = 605 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 176/605 (29%), Positives = 297/605 (49%), Gaps = 18/605 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E++ N+IAAGE++ERP+ +KEL+EN++DA +++V+ + G ++ DNG G Sbjct: 4 IRELPEQLANRIAAGEVVERPASVVKELVENAIDAGATKVDVDLQEAGIRLIKVRDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 E+ A RH TSKI D D I T GFRGEAL SI +VSH+ L S+ + G + Sbjct: 64 FHEEDAARAFLRHATSKIRDEHDLFRIRTLGFRGEALASIASVSHVLLKSKRADED-GFE 122 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G + P A N GT + V LFF PARL +LK+ E ITD + R+A+++P Sbjct: 123 MTLEGGVVKETNPTATNVGTEIAVSQLFFNTPARLKYLKTSATELASITDTLNRLALSHP 182 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++ FT + ++ + NG+ + + + G V + K+++ TL + P Sbjct: 183 EIRFTVFHEEK---ELLRTNGNGDLKQVMLAIYGRQVAAQIVTASSKTSDYTLSAHLVRP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N + +NGR++++ + ++ Y +P+GRYP+ VL +++DP +DVNVH Sbjct: 240 EVTRSNKQYVTLILNGRSIKNFALTQSVLEGYHTLLPIGRYPIAVLEVKMDPMLIDVNVH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS--SVLSKKMISSFHQDNAPKTHLPKY 358 P K +R + I +++Q + ++ + S K ++ Q + P+ Sbjct: 300 PTKREVRLSKEKELCQLIRETVQLTLREQRLIPSVKQEPKLKRVTPSEQSKLDFSMEPQP 359 Query: 359 ATSLTNTQEKLFLQE-------NRLSTNDLLPSDDPTYSEDNDPVEES--EATHYQLGIA 409 + + +E L + + + VEES ++ Sbjct: 360 KQADSVEWNYPIPRERKETLTSPSQWNPAPLVHEPEAEMIEPEQVEESVRQSERLPALDV 419 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q+H +YII DG+ ++DQHAA ER+ +E + + Q LL P ++ + E Sbjct: 420 IGQLHSSYIICGAEDGMYVMDQHAAQERIKYELFYEQLGRPEKEYQLLLIPLTLEFTQEE 479 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 I E L GI E FG N +REIP + ++ +RD+++ I + + Sbjct: 480 TLAIEEVLPLLAEAGITLEPFGGNTFLVREIPTWYPQHDLEGTIRDLVEMAIQQ-RSIDI 538 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 E MAC SI++ + M +L+ ++ + + C HGRP +K ++E Sbjct: 539 AKYREEASILMACKRSIKANHPLNMEMMRQLIDDLSRTTSPFTCPHGRPILVKWSTYELE 598 Query: 590 KLFGR 594 KLF R Sbjct: 599 KLFKR 603 >gi|258423863|ref|ZP_05686748.1| DNA mismatch repair protein MutL [Staphylococcus aureus A9635] gi|257845892|gb|EEV69921.1| DNA mismatch repair protein MutL [Staphylococcus aureus A9635] Length = 669 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 170/670 (25%), Positives = 304/670 (45%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-------------------------- 333 HP K +R + I+ IQ+A + + Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 334 -------------SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTND 380 S ++K + +Q++ Y +T T E L + ND Sbjct: 359 RQNTEDNQEKTFSSEESNRKPFMAENQNDEIVIREDSYNPFVTKTSESLIADDESSGYND 418 Query: 381 LLPSDDPTYSEDNDPVEESEA------------------------------------THY 404 D+ + + + ++E + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSNDDTSVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 Q+H YII+Q G+ ++DQHAA ER+ +E R Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|332363705|gb|EGJ41485.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK49] Length = 698 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 182/636 (28%), Positives = 302/636 (47%), Gaps = 47/636 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 53 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDNGE 112 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 113 GIAHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATEAGQHGT 172 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 173 LLVAQGGEIEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 232 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 233 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 289 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 290 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 349 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I ++ ++ + ++ + + + + +T LP Sbjct: 350 HPTKQEVRISKERELMALISQAIATSLKEQDLIPDALENLAKSTVKRANKSEQTSLPLKE 409 Query: 357 -----------------------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 + S E + + + ++ S D Sbjct: 410 NRLYYDKEQNDFFLKPQVAEQQLSFEESAEPVHEATDEKAEPPQSTSVKFAERKPVSYDQ 469 Query: 394 ---------------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 D +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 470 LDHPELDQVSLERAVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERV 529 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E R+ + Q LL P I + + I + L GI E +G N +R Sbjct: 530 KYEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRMGLLEDAGIFLEEYGANQFILR 589 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 590 EHPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSAR 648 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 649 DLLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 684 >gi|332360163|gb|EGJ37977.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK1056] Length = 647 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 184/635 (28%), Positives = 302/635 (47%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 3 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 63 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATETGQHGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 123 LLVAQGGEIEEHEPTSSPVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 183 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+I ++ ++ + ++ + + +T LP Sbjct: 300 HPTKQEVRISKERELMALISQAIATSLKEQDLIPDALENLAKSTVKRATKPEQTSLPLKE 359 Query: 360 TSLTNTQE------KLFLQENRLSTNDLLPSDDPTYSEDNDPVE---------------- 397 L +E K + E +LS + E ++P Sbjct: 360 NRLYYDKERNDFFLKPEVAEQQLSFEESAKPVHQATDEKSEPQPTSVKFAERRPVSYDQL 419 Query: 398 ------------------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 + E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 DHPELDQASLERAVDKLGQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERVK 479 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P I + + I + + L GI E +G N +RE Sbjct: 480 YEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRMKLLEDAGIFLEEYGANQFILRE 539 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 540 HPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSARD 598 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 599 LLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 633 >gi|313890398|ref|ZP_07824029.1| DNA mismatch repair protein, C-terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] gi|313121241|gb|EFR44349.1| DNA mismatch repair protein, C-terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] Length = 655 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 181/643 (28%), Positives = 309/643 (48%), Gaps = 54/643 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERP+ +KEL+EN++DA+SS++ I G ITDNG Sbjct: 3 KIIELPEILANQIAAGEVIERPASVVKELVENAIDAKSSQITIDIEESGLKSITITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ +++PM++ RH TSKI + D I T GFRGEALPSI ++S LT+ S ++ G+ Sbjct: 63 GMSEQDLPMSILRHATSKIKNQGDLFRIRTLGFRGEALPSIASISELTIASATEESEHGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G KI ++M GT + V +LF+ PARL ++KS Q E I DV+ R+++ + Sbjct: 123 QLFVRGGKIEGQEAISMPVGTRIRVENLFYNTPARLKYMKSLQSELAHIVDVVNRLSLGH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT + + S +G + I+ + G +E+ + + GY + Sbjct: 183 PEIAFTLISDGREMTR---TSGSGQLKQAIAGIYGLKTAKKMIEIANADLDFDVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+VV+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I +I +++ + + ++ + S+ A +T LP Sbjct: 300 HPTKQEVRISKERELMALISTAIAESLKAQDLIPDALENLAKSSTRSLPKAEQTRLPLQT 359 Query: 357 ---------------------------------------------KYATSLTNTQEKLFL 371 + ++ + Sbjct: 360 RKLYYDPHENDFFVEKKDVSEAQTPIYSDSFDLDRPVKLAEEASVELSSPAVKHASRPDT 419 Query: 372 QENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 +E +DL + + + +E EA+ + Q+H Y+ +Q DGL I+DQ Sbjct: 420 EELVGDHSDLTFKNKHKLEQVVERLENEEASTFPELDYFGQMHGTYLFAQGVDGLFIIDQ 479 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 HAA ER+ +E R+ + Q LL P + + + + E L+ +GI E +G Sbjct: 480 HAAQERVKYEYYREKIGEVDSSLQQLLVPYLFEFSGSDFLTLQEKMSLLNDVGIYLEPYG 539 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRK 551 + +RE P + + I + ++ D ++ + +++ + M+C SI++ Sbjct: 540 HHTFILREHPIWMKESEIEAGVYEMCDMLLLTQEV-SIKTYRAELAIMMSCKKSIKANHT 598 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +LL ++ + N C HGRP I SD+EK+F R Sbjct: 599 LDDYSARQLLLQLAQCKNPYNCPHGRPVLIHFSKSDMEKMFRR 641 >gi|145220427|ref|YP_001131136.1| DNA mismatch repair protein MutL [Prosthecochloris vibrioformis DSM 265] gi|189030405|sp|A4SGM5|MUTL_PROVI RecName: Full=DNA mismatch repair protein mutL gi|145206591|gb|ABP37634.1| DNA mismatch repair protein MutL [Chlorobium phaeovibrioides DSM 265] Length = 614 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 174/615 (28%), Positives = 301/615 (48%), Gaps = 28/615 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + N+I+AGE+++RP +KEL+EN++DA + R+ +I+ GK +I DNG G Sbjct: 4 IARLPESVANKISAGEVVQRPVSVVKELLENAIDAGADRISVIISDAGKELVRIVDNGCG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M ++ ++V+R TSKI +D ++ + GFRGEAL SI +VSH L + + Sbjct: 64 MERDDALLSVERFATSKIRGVEDLEDLSSLGFRGEALASISSVSHFELRTAVEGSPLALS 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 G + V GT + VR+LF+ +PAR FLKS E I +++R +A P Sbjct: 124 FRYEGGVLVEEARVQGERGTSISVRNLFYNVPARRKFLKSNATEYGHIYELVRSFVLACP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++S+ + + ER+ G F + V + E+++ I+++G+ G P Sbjct: 184 EISWQMVNDGEELFNFRTP----DLNERLDFFYGSGFAESLVPVTEENDYISIRGFIGRP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + Y FIN R VQ++ + ++ AY E + + P +L E+DP ++DVNVH Sbjct: 240 ALQKRRRLDQYFFINRRLVQNRMLSQALQQAYGELLVERQAPFALLFFEMDPSRIDVNVH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-KMISSFHQDNAPKTHLPKYA 359 PAK +RF + +RN I++A+ S + +S+ + +P Sbjct: 300 PAKLEVRFEDERSVRNMFYPVIKRAVRSYDFSPDLASGELPPLSTRYPSPSPIAFQDVAE 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA------------------ 401 ++T + +E ST+ + + E E A Sbjct: 360 PAVTKGELYRNYREGAFSTSRPQDNLPEGFQEQLFSPPEPPAGFVGTASLAGSGGNEDEV 419 Query: 402 --THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 + Q+H Y+I Q GL+I+DQH AHER+++E+ ++ SQ LL Sbjct: 420 PLGDAVAEVKIWQLHNKYLICQIKTGLMIIDQHVAHERVLYERAVDVMETSVPNSQQLLF 479 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P+ ++L + + E +DL+RLG FG + I +P + + +L+D+I E Sbjct: 480 PQKVELRPWDWEIFEEIRDDLYRLGFNLSLFGSRTVMIEGVPQDVRPGSEVSILQDMIAE 539 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 ++++ L+ R +N+ + +C +I +G+K+ EM L+ + + C HGRP Sbjct: 540 YSENASKLKLEKR-DNLAKSYSCRNAIMTGQKLSLQEMRSLIDSLFATRDPYCCPHGRPV 598 Query: 580 FIKLKLSDIEKLFGR 594 IK+ L ++ +FGR Sbjct: 599 IIKMTLGQLDHMFGR 613 >gi|302342260|ref|YP_003806789.1| DNA mismatch repair protein MutL [Desulfarculus baarsii DSM 2075] gi|301638873|gb|ADK84195.1| DNA mismatch repair protein MutL [Desulfarculus baarsii DSM 2075] Length = 615 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 195/604 (32%), Positives = 317/604 (52%), Gaps = 14/604 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +R L +++ NQIAAGE++ERP+ +KEL+EN+LDA + RV+ + G+ ++ D+G Sbjct: 9 PVRLLPDEVANQIAAGEVVERPASVLKELVENALDAGARRVQIDVEAAGRGLIRVADDGH 68 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+++++ +AV+RH TSK+ +DD + T GFRGEALPSI +VS L + +R + GA Sbjct: 69 GMSADDLLLAVERHATSKLGQADDLIGVRTLGFRGEALPSIASVSRLRITTRQAADEVGA 128 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I + G+ VE RDLFF IPAR FL+ + E ++ + R+A+ + Sbjct: 129 LLVIEGGVIRQSGQIGCRVGSTVEARDLFFNIPARRKFLRGQITEAGHLSAALTRLALGW 188 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F ++ + + + R++ ++G + + V L+++ I L G Sbjct: 189 PGVAFRYAVGGKALHDLPAT---DDLTGRVAGLLGREAAAHMVGLDQRVGPIRLWGLAAT 245 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R A+Q +VF+NGR V+DK +L + AY +P R PV VL LE+DP VDVNV Sbjct: 246 PAHSRSAADQVFVFVNGRFVRDKILLHAVGQAYHGLLPAERRPVAVLHLELDPELVDVNV 305 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST---------SSVLSKKMISSFHQDNA 350 HPAK +RFR + + ++ ++++ + + + +S + + A Sbjct: 306 HPAKIEVRFRQQREVHDALVLALRRGLAQAAPARGVAPAFGGDASAPAPLAVEKAAWTPA 365 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC 410 + P +T + ++ E L P P E Sbjct: 366 SQEAPPPASTPAWSPAPRVPPAETPPRRPWLDDPPAPQPWAGPAPRLEPLFGPAGELSLI 425 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 Q+H YI+ DGLVI+DQHAAHERL FE+++ + SQ LL P +++L E Sbjct: 426 GQLHGLYILCSAPDGLVIIDQHAAHERLTFERLKGQLARGAVASQGLLAPVVLELSPQEA 485 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 A RLG++ FG NA A+R +PA+ + + +L RD++ + S Sbjct: 486 AWAALQAPIWARLGLEIAPFGGNAWAVRSLPALAAGADPGRLARDMLSTMSASGMPVDTP 545 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 + +E L ++AC+GSIR G+++ EM+ L+R + P C HGRP F+ L ++ + Sbjct: 546 EFLEAALISLACHGSIRQGQQLSRPEMDELVRACAQLPPPVTCPHGRPVFLSLGRRELAR 605 Query: 591 LFGR 594 F R Sbjct: 606 CFKR 609 >gi|22538232|ref|NP_689083.1| DNA mismatch repair protein [Streptococcus agalactiae 2603V/R] gi|77414024|ref|ZP_00790195.1| DNA mismatch repair protein HexB [Streptococcus agalactiae 515] gi|22535144|gb|AAN00956.1|AE014286_19 DNA mismatch repair protein HexB [Streptococcus agalactiae 2603V/R] gi|77159906|gb|EAO71046.1| DNA mismatch repair protein HexB [Streptococcus agalactiae 515] Length = 659 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 174/645 (26%), Positives = 304/645 (47%), Gaps = 56/645 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + + NQIAAGE++ERPS +KEL+EN++DA SS++ + G QITDNG Sbjct: 5 KIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDNGE 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMTSE+ ++++RH TSKI D I T GFRGEALPSI ++S +T+ + Q G Sbjct: 65 GMTSEDAVLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSIASISLMTIKTATEQGKQGT 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G I V+ GT + V +LFF PARL ++KS Q E I D++ R+++A+ Sbjct: 125 LLVAKGGNIEKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELAHIIDIVNRLSLAH 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT K S G+ + I+ + G + +E++ + + GY + Sbjct: 185 PEVAFTLINDGKEMTK---TSGTGDLRQAIAGIYGLNTAKKMIEISNADLDFEISGYVSL 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + +I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 242 PELTRANRNYITLLINGRYIKNFLLNRSILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + + I +I +++ + + ++ + S+ D +T Sbjct: 302 HPTKQEVRISKERELMSLISTAISESLKQYDLIPDALENLAKTSTRSVDKPIQTSFSLKQ 361 Query: 357 ------------------------------------------KYATSLTNTQEKLFLQEN 374 T + + + Sbjct: 362 PGLYYDRAKNDFFIGADTVSEPIANFTNLDKSDGSVDNDVKNSVNQGATQSPNIKYASRD 421 Query: 375 RLSTNDLLPSDDPTYSEDN-----DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + S D S+ + + ++ E++ + Q+H Y+ +Q GL I+ Sbjct: 422 QADSENFIHSQDYLSSKQSLNKLVEKLDSEESSTFPELEFFGQMHGTYLFAQGNGGLYII 481 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQHAA ER+ +E R+ + Q LL P + + + + E L +GI E Sbjct: 482 DQHAAQERVKYEYYREKIGEVDNSLQQLLVPFLFEFSSSDFLQLQEKMSLLQDVGIFLEP 541 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 +G N +RE P + ++ + + ++ D ++ ++ +++ + M+C SI++ Sbjct: 542 YGNNTFILREHPIWMKEEEVESGIYEMCDMLLLTNEV-SVKKYRAELAIMMSCKRSIKAN 600 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL ++ + N C HGRP + +D+EK+F R Sbjct: 601 HTLDDYSARHLLDQLAQCKNPYNCPHGRPVLVNFTKADMEKMFKR 645 >gi|90962102|ref|YP_536018.1| DNA mismatch repair protein [Lactobacillus salivarius UCC118] gi|123391342|sp|Q1WT16|MUTL_LACS1 RecName: Full=DNA mismatch repair protein mutL gi|90821296|gb|ABD99935.1| DNA mismatch repair protein [Lactobacillus salivarius UCC118] Length = 659 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 180/649 (27%), Positives = 309/649 (47%), Gaps = 61/649 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE++ERP+ +KEL+ENS+DA + +++ +I G QI D+G Sbjct: 3 KIHELSEILANQIAAGEVVERPASVVKELVENSIDAGAKQIDIIIEDAGLKSIQIIDDGN 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ A +RH TSKI D D +HT GFRGEALPSI +VS + + + G Sbjct: 63 GIEAEDVETAFKRHATSKIIDRKDLFKVHTLGFRGEALPSIASVSDVVMETAVSG-RAGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G ++ A GT + V DLF+ PARL +LKS Q E + I+D++ R+A+++ Sbjct: 122 KIHIKGGEVLEKTLSASREGTTITVSDLFYNTPARLKYLKSVQTELSYISDIVNRLALSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V+ + + ++ + NGN + I + G ++ + + + + GYT + Sbjct: 182 TDVALSLTNNGR---QLLQSAGNGNLQQTIGAIYGVQNARQMIKFEDANLDFKISGYTSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR V++ + + Y + GRYP+ VL +E+DP VDVNV Sbjct: 239 PKLTRASRNYISLLVNGRYVKNFQLTKAVIEGYGSKLMTGRYPITVLSIELDPTLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------QDN 349 HP K I+ + FI ++I + I ++ + + + K + + Sbjct: 299 HPTKQEIKISKEDELVTFIQKTIFERIGQENLIPDGLQNIKSKTKEKLDFEQLKVGLNEA 358 Query: 350 APKTHLPKYATSLTNT------------------------------------QEKLFLQE 373 + + ++ T +T+ ++K L+ Sbjct: 359 SKQYQTKQHRTGITSEVTAALFGEKLTKDESQTQTNEKIKEETKVELSPIIIKDKQDLKS 418 Query: 374 NRLSTNDLLPSDDPTYSEDNDPVEES--------EATHYQLGIACAQIHQNYIISQTTDG 425 +R+ D +E E++ + + Q+H ++ ++ +G Sbjct: 419 DRVKEWDEKYQSRNKETEVTSIAEKNGSVDDKRKDTPRFPTLRYIGQMHGTFLFAEGEEG 478 Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L IVDQHAA ER+ +E R++ T Q LL P ++ + +I E+ + L LGI Sbjct: 479 LYIVDQHAAQERVKYEYYREEIGKVSPTQQNLLVPIVLTYPTTDALIIDENIDKLKELGI 538 Query: 486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 E FG N IR+ P + ++R++ID + ++ E M+C S Sbjct: 539 YLEDFGQNTYIIRQHPTWFKEGQEESIIREMIDYFL-KDRKLSIAKFREKTAIMMSCKRS 597 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 I++ + + +L +++ N C HGRP +KL D+E +F R Sbjct: 598 IKANHHLDDKQAKSILEQLKTCENPFNCPHGRPVLVKLSNKDLEHMFKR 646 >gi|25012090|ref|NP_736485.1| DNA mismatch repair protein [Streptococcus agalactiae NEM316] gi|81588689|sp|Q8E2R5|MUTL_STRA3 RecName: Full=DNA mismatch repair protein mutL gi|24413634|emb|CAD47711.1| Unknown [Streptococcus agalactiae NEM316] Length = 657 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 174/645 (26%), Positives = 304/645 (47%), Gaps = 56/645 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + + NQIAAGE++ERPS +KEL+EN++DA SS++ + G QITDNG Sbjct: 3 KIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMTSE+ ++++RH TSKI D I T GFRGEALPSI ++S +T+ + Q G Sbjct: 63 GMTSEDAVLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSIASISLMTIKTATEQGKQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G I V+ GT + V +LFF PARL ++KS Q E I D++ R+++A+ Sbjct: 123 LLVAKGGNIEKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELAHIIDIVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT K S G+ + I+ + G + +E++ + + GY + Sbjct: 183 PEVAFTLINDGKEMTK---TSGTGDLRQAIAGIYGLNTAKKMIEISNADLDFEISGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + +I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITLLINGRYIKNFLLNRSILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + + I +I +++ + + ++ + S+ D +T Sbjct: 300 HPTKQEVRISKERELMSLISTAISESLKQYDLIPDALENLAKTSTRSVDKPIQTSFSLKQ 359 Query: 357 ------------------------------------------KYATSLTNTQEKLFLQEN 374 T + + + Sbjct: 360 PGLYYDRAKNDFFIGADTVSEPIANFTNLDKSDGSVDNDVKNSVNQGATQSPNIKYASRD 419 Query: 375 RLSTNDLLPSDDPTYSEDN-----DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + S D S+ + + ++ E++ + Q+H Y+ +Q GL I+ Sbjct: 420 QADSENFIHSQDYLSSKQSLNKLVEKLDSEESSTFPELEFFGQMHGTYLFAQGNGGLYII 479 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQHAA ER+ +E R+ + Q LL P + + + + E L +GI E Sbjct: 480 DQHAAQERVKYEYYREKIGEVDNSLQQLLVPFLFEFSSSDFLQLQEKMSLLQDVGIFLEP 539 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 +G N +RE P + ++ + + ++ D ++ ++ +++ + M+C SI++ Sbjct: 540 YGNNTFILREHPIWMKEEEVESGIYEMCDMLLLTNEV-SVKKYRAELAIMMSCKRSIKAN 598 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL ++ + N C HGRP + +D+EK+F R Sbjct: 599 HTLDDYSARHLLDQLAQCKNPYNCPHGRPVLVNFTKADMEKMFKR 643 >gi|253681623|ref|ZP_04862420.1| DNA mismatch repair protein MutL [Clostridium botulinum D str. 1873] gi|253561335|gb|EES90787.1| DNA mismatch repair protein MutL [Clostridium botulinum D str. 1873] Length = 637 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 194/638 (30%), Positives = 320/638 (50%), Gaps = 49/638 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LSE+ N+IAAGE++ERP+ +KEL+ENS+DA S + I GK +ITD+G Sbjct: 3 RINLLSEETSNKIAAGEVVERPASVVKELVENSIDANSQNITIEIKESGKEEIKITDDGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A H TSKIS +D +I+TFGFRGEALPSI AVS++ L +R + G Sbjct: 63 GIHPEDVEKAFMPHGTSKISFIEDLYSINTFGFRGEALPSIAAVSNVLLKTRTKDCDFGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I++SG K+ + N GT++EV+DLFF +PAR FLKS++ E LI+++I R+A+A Sbjct: 123 EISVSGGKVKHLNDTGCNIGTVIEVKDLFFNVPAREKFLKSDKREAGLISNIINRLALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 +SF + + + I + G++ N V + S+ +++ GY G Sbjct: 183 HNISFKYYNNDKRSLITFAS---EDVKDTIRAIYGKNIYENIVGFEKHSDIVSVYGYIGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 +RG+ N +F+N R ++ I + + A+ + ++P VL L+I P +DVNV Sbjct: 240 SEISRGSRNNQSIFVNKRYIKSGIITAAVENAFKSFSTVNKFPFFVLFLDIYPEFLDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP-------- 351 HP KS ++F++ II + ++ A++ + S+ ++ + P Sbjct: 300 HPTKSEVKFQDERIIYKVVFDAVHSALSDSVRKSFSIEFEEEDPNPIPVQIPIDLKNKEI 359 Query: 352 ------------KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 + K SL N + +EN ++ N+ + + + + Sbjct: 360 KPVINDLEHSKSNLNTIKLKNSLNNDSNNIVNKENYININEKEYNKYHKEDKILKEINNN 419 Query: 400 EATHYQL-----------------------GIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + Q ++ YI++QT D ++DQHAAHE Sbjct: 420 ISIDNTYKTTNNEKGKKQLDTLDKVDKFPELNIIGQFNKTYILAQTLDIFYMIDQHAAHE 479 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 +++FEK R + + SQ LLTP +I++ + A E+ G E FG N I+ Sbjct: 480 KILFEKFRNQIKNRDVISQILLTPVVIEMSAEDFAYYSENKNIFEESGFSLELFGDNTIS 539 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 IRE P +L K + +I+D I + +++ N++A++AC +I++ + E Sbjct: 540 IREAPMLLGKVSTKNFFLEILDNIKNMGKG-NIEEVKHNMIASLACKAAIKANHTLSYDE 598 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M L+ E+ C HGRPT I+L L +IEK F R Sbjct: 599 MCSLVEELRYIEEPFNCPHGRPTIIRLPLKEIEKKFKR 636 >gi|196233474|ref|ZP_03132317.1| DNA mismatch repair protein MutL [Chthoniobacter flavus Ellin428] gi|196222470|gb|EDY16997.1| DNA mismatch repair protein MutL [Chthoniobacter flavus Ellin428] Length = 627 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 194/626 (30%), Positives = 322/626 (51%), Gaps = 36/626 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LSE++ +Q+AAGE++ERP+ +KEL+ENS+DA + ++E I GG S ++ D+GF Sbjct: 3 RIALLSEQVASQVAAGEVVERPASVVKELVENSIDAGAKKIEVAIRRGGISSIRVVDDGF 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ + ++RH TSKI DD ++IHT GFRGEALPSI +VS L +R P G Sbjct: 63 GMDRDDALLCLERHATSKIRTGDDLASIHTLGFRGEALPSIASVSRFRLATREPAALAGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ++G KI SV+ PGT +EVR LF+ +PAR FL++E E++ + + AI + Sbjct: 123 EVIVNGGKIESVKDCGDAPGTQIEVRSLFYNLPARRKFLRTENTESSHVEHQLHLQAIGH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN-EKSNEITLQGYTG 238 P++ F F + Y++ + ERI + G +E+ ++ I ++G+ G Sbjct: 183 PEIGFVFVNDERVVYQLPPTTH---LRERIRDLCGAALAAELLEVPEFAADNIRIRGFVG 239 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +R + Q +F+NGR V++ + +R Y + G++PV L +++DP VDVN Sbjct: 240 KAGVSRSSRAQQLIFLNGRAVENSTLNFALREGYHTALMKGQHPVTFLFIDMDPAAVDVN 299 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL--- 355 VHPAK +RFRN IR I+++I++ + S+ + + + + L Sbjct: 300 VHPAKREVRFRNSAEIREAIVEAIRRTLETDRAEWSATFRAGTSAETANEVSGFSFLVSG 359 Query: 356 -------------PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE----- 397 P + F Q R + P T +E + Sbjct: 360 SPAPPVPETPPLIPIHEQVALRRDWGAFPQPPRAPITPISPIPPITPTEVSPTSPTVPAA 419 Query: 398 ---------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + E Q + + Y++ + GLV+VDQHAAHER++FE+M + Sbjct: 420 AEPIPPAFPDPETPSAQDFKILGVLGKLYVLMENATGLVLVDQHAAHERILFEEMLKRME 479 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 S + +Q LL P + + + I H + L+R GI E FG I +P L Sbjct: 480 SQGVPTQRLLLPLTLQVSPRDADWITHHLDVLNRAGIGLEPFGAGTFKIDSLPTFLRGSE 539 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 QLLR+IID++ ++S + E+++A C ++++ ++ E+ RL++++ Sbjct: 540 PSQLLREIIDDLRETSAQTSKLRLGEHMIAKTVCRHAVKANDVLREPELVRLIQDLLACD 599 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT I++ S++EK FGR Sbjct: 600 LPYCCPHGRPTMIQMSYSELEKKFGR 625 >gi|326407802|gb|ADZ64873.1| DNA mismatch repair protein MutL [Lactococcus lactis subsp. lactis CV56] Length = 656 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 186/642 (28%), Positives = 320/642 (49%), Gaps = 53/642 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L+E + NQIAAGE++ERP+ +KEL+ENS+DA SS++ + G ++ DNG Sbjct: 3 KIIELNEALANQIAAGEVVERPASVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDNGL 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A++RH TSKI D D I T GFRGEALPSI +VS +T+ + + +G Sbjct: 63 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSTAEEESGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G I ++ P+A GT + V +LF+ PARL ++KS Q E + ITD+I R+++A+ Sbjct: 123 KLIAKGGNIETLEPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SFT K + NG+ + I+ + G ++ + L GY I Sbjct: 183 PEISFTLVNEGKEFLK---TAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFELTGYVSI 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P +L ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAILSIKIDPTLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I ++I +A+++ + ++ + + + + + +T LP Sbjct: 300 HPTKQEVRLSKERELMALISKAIDEALSEGVLIPEALENLQGRAKEKETLSVQTELPLQN 359 Query: 360 TSL--TNTQEKLFLQEN------------------------------------------- 374 L N ++ +++E Sbjct: 360 NPLYYDNVRQDFYVREEATFKINKNQPSNDSSEQTFDNFTENQLNTDAVNEKITDRTVES 419 Query: 375 --RLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 ++ N L + + ++ + S+++ + AQ+H Y++ Q+ +GL +VDQH Sbjct: 420 TTEITDNSLENTVSNFEIDFDNEAKISQSSTFPQLEYLAQLHATYLLCQSKEGLYLVDQH 479 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AA ER+ +E + + Q LL P + L + + ++ E + LH G+ E +G Sbjct: 480 AAQERIKYEYWKDKIGEVSMEQQILLAPYLFTLAKNDFIVLAEKKDLLHEAGVFLEEYGE 539 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 N +RE P L + I + + +ID I+ S ++L+ ++ A +AC SI++ + Sbjct: 540 NQFILREHPIWLKETEIEKSINAMIDIILASKE-FSLKKYRHDLAAMVACKSSIKANHPL 598 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL E+ N C HGRPT + DI+K+F R Sbjct: 599 DAESARALLAELATCKNPYSCAHGRPTIVHFSGDDIQKMFRR 640 >gi|24380423|ref|NP_722378.1| DNA mismatch repair protein [Streptococcus mutans UA159] gi|81588215|sp|Q8DRX0|MUTL_STRMU RecName: Full=DNA mismatch repair protein mutL gi|24378448|gb|AAN59684.1|AE015030_14 putative mismatch repair protein HexB [Streptococcus mutans UA159] Length = 651 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 182/639 (28%), Positives = 303/639 (47%), Gaps = 50/639 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERP+ +KEL+EN++DA+SS++ I G Q+TDNG Sbjct: 3 KIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDNGQ 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ M+++RH TSKI D I T GFRGEALPSI ++S LTL + G Sbjct: 63 GIEQADVIMSLRRHATSKIKKQSDLFRIRTLGFRGEALPSIASISRLTLKTATKGEIYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + +G KI ++ GT V V +LFF PARL ++KS Q E I DVI R+++A+ Sbjct: 123 LLIANGGKIEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHIIDVINRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT ++ + G+ + ++ + G VE++ + + GY + Sbjct: 183 PEIAFTLINDGR---ELTKTAGKGDLRQALAGIYGVTIAKKMVEISNADLDFEVSGYISL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + N + +I ++ ++ + ++ + S+ + +T LP Sbjct: 300 HPTKQEVRISKEKELMNLVSSAIADSLREQELIPDALENLAKTSTNKKQKFEQTQLPLKQ 359 Query: 360 TSL--TNTQEKLFLQENRLSTNDLLP---------------------------------- 383 ++L TQ FL+E +S Sbjct: 360 SNLYYDKTQNDFFLKETTVSEASSEFTVVDKAVNITDNVSGHSSVKYAQRQMRTCENKEH 419 Query: 384 --------SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 S + +E E + + Q+H Y+ +Q GL I+DQHAA Sbjct: 420 PSLTMTDKQQKRQLSRIVESLENEEKSTFPELEYFGQMHGTYLFAQGEGGLYIIDQHAAQ 479 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 ER+ +E R + Q LL P + + + + E L+ +GI E +G N Sbjct: 480 ERVKYEYYRDKIGEVDNSLQQLLVPYLFEFPANDFMTLQEKMSILNEVGIHLENYGENTF 539 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 +RE P L +K I + ++ D ++ ++ +++ + M+C SI++ + Sbjct: 540 ILREHPIWLQEKEIESAVYEMCDMLLLTNEV-SIKKYRAELAIMMSCKRSIKANHTLDDY 598 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + +D+EK+F R Sbjct: 599 SARNLLIQLSQCKNPYNCPHGRPVLVNFTKADMEKMFRR 637 >gi|258541836|ref|YP_003187269.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO 3283-01] gi|256632914|dbj|BAH98889.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO 3283-01] gi|256635971|dbj|BAI01940.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO 3283-03] gi|256639026|dbj|BAI04988.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO 3283-07] gi|256642080|dbj|BAI08035.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO 3283-22] gi|256645135|dbj|BAI11083.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO 3283-26] gi|256648190|dbj|BAI14131.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO 3283-32] gi|256651243|dbj|BAI17177.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654234|dbj|BAI20161.1| DNA mismatch repair protein MutL [Acetobacter pasteurianus IFO 3283-12] Length = 643 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 227/625 (36%), Positives = 350/625 (56%), Gaps = 38/625 (6%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R+L E I+N+IAAGE+IERP+ A+KEL+EN++DA + R+E +AGGG +TD+G GM Sbjct: 22 RRLPEVIVNRIAAGEVIERPAAAVKELVENAIDAGARRLEVSLAGGGVDRIIVTDDGVGM 81 Query: 64 TSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 +++++ +AV RHCTSK+ D+ +I T GFRGEALPSIGA + L + SRP + +I Sbjct: 82 SADDLALAVDRHCTSKLRDETLVHISTLGFRGEALPSIGAAARLCITSRPRGESGAWRIR 141 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + G K+S V P A PGT V V DLFF PAR FLKS +VE +V+RR+A+A P+ Sbjct: 142 VEGGKVSPVEPAAGAPGTSVVVEDLFFATPARRKFLKSARVEGRHAENVVRRLALAVPQT 201 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 +F F + + + + R + ++ + +E++ + + +TL G+ P+ Sbjct: 202 AFRFMLDERVLFDLPA----QDMATRSAALLDASEADGFLEISGERDGMTLSGFICPPSV 257 Query: 243 NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPA 302 +R AN ++ +NGR V D + + +R AY I GR+PVV L+L + P +VDVNVHPA Sbjct: 258 HRSTANGQFMLVNGRPVVDPVLKTAVRVAYRRVIEPGRHPVVALMLTVPPDRVDVNVHPA 317 Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINK----KGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 K+ +RF + +R+ +I +IQ+A+ G+ + + ++ Sbjct: 318 KTELRFADEASVRSLVIGTIQRALEHGAGSVGVRPVLSSAPRQARIWYPPEKGAAPPVPA 377 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND-----------------------P 395 T E + E RL D + Sbjct: 378 PAFHAPTPEGVRFAEGRLQFGDAPAARTLPPVAMPSLHARWDAPAVGTPATGQAEPAYTA 437 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITS 454 + A + LG A AQ+ YI++ DG LV+VDQHAAHERL E++R F S + + Sbjct: 438 SAQPVAADHPLGAAIAQVLDTYILAVAADGSLVLVDQHAAHERLTHERLRAQFLSGHVQA 497 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL P+++DL + L++ L +LG++ E FG +++ +R +PA+L + LLR Sbjct: 498 QRLLVPDVVDLPRVQVDLLLARQPTLEKLGVEIEAFGGDSVLVRALPAMLRSSDAVSLLR 557 Query: 515 DIIDEIIDSSTTYT-----LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 D+ DE+ L R++ ++A MAC+GSIR+GR++ EMN LLR+ME+ P Sbjct: 558 DLADELEADENGAPDEMAALDGRLDAVIARMACHGSIRAGRRLSVEEMNALLRQMEETPR 617 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 + C+HGRPT++KL +D+EKLFGR Sbjct: 618 AGTCSHGRPTWLKLSKADLEKLFGR 642 >gi|225871418|ref|YP_002747365.1| DNA mismatch repair protein MutL [Streptococcus equi subsp. equi 4047] gi|254766176|sp|C0MAS4|MUTL_STRE4 RecName: Full=DNA mismatch repair protein mutL gi|225700822|emb|CAW95527.1| DNA mismatch repair protein MutL [Streptococcus equi subsp. equi 4047] Length = 660 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 176/648 (27%), Positives = 310/648 (47%), Gaps = 59/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +L E + NQIAAGE+IERP+ +KEL+EN++DA+SS++ I G QITDNG Sbjct: 3 TIIELPEVLANQIAAGEVIERPASVVKELVENAIDAKSSQITVEIEESGLKMIQITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S LT+ + G+ Sbjct: 63 GMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKLTIKTATADAEHGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG KI + V+ GT ++V +LF+ PARL ++KS Q E + DV+ R+++A+ Sbjct: 123 ILVASGGKIEQLEAVSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHVVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT + ++ S G+ + ++ + G + ++++ + + G+ + Sbjct: 183 PEIAFTLISDGK---QLTQTSGAGDLRQALAGIYGLNTAKKMIDISSADLDFEVGGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K IR + I +I +++ ++ + ++ + S+ +T LP Sbjct: 300 HPTKQEIRISKERELMALISTAISESLREQDLIPDALENLARSSTRSFSKPEQTSLPLQP 359 Query: 360 TSL--TNTQEKLFLQENRLSTNDLL----------------------------------- 382 + L + F +E +S + Sbjct: 360 SQLYYDPQKNDFFTKETVVSEDSPQGFNHETLVDSGVKQVDNLQLAKTESEAAAPSVKYA 419 Query: 383 ----------------PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGL 426 + S+ D +E E + + Q+H Y+ +Q DGL Sbjct: 420 SRPDPMLSDGEHPGLDVHNKQKLSQMLDRLENEEQSVFPELDYFGQMHGTYLFAQGRDGL 479 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 I+DQHAA ER+ +E R + Q LL P + + + + E L+ +GI Sbjct: 480 FIIDQHAAQERVKYEYYRDKIGEVDNSLQQLLVPYLFEFSGSDFINLQEKMSLLNEVGIY 539 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E +G + +RE P + + I + ++ D ++ ++ +++ + M+C SI Sbjct: 540 LEPYGNHTFILREHPIWMKEAEIESGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKRSI 598 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + +LL ++ + N C HGRP I +D+EK+F R Sbjct: 599 KANHSLDDYSARQLLLQLAQCKNPYNCPHGRPVLINFSKADMEKMFRR 646 >gi|258511467|ref|YP_003184901.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478193|gb|ACV58512.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 622 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 181/623 (29%), Positives = 312/623 (50%), Gaps = 39/623 (6%) Query: 7 SEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSE 66 + + +QIAAGE++ RP+ +KEL+ENSLDA ++R+E +A GG + + D+G GM+ E Sbjct: 2 PKVMADQIAAGEVVARPASCVKELVENSLDAGATRIEVSLAEGGIACVTVVDDGEGMSPE 61 Query: 67 EIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAIS 124 + +A RH TSK+ + D + I T GFRGEAL +I +V+ + L++R +G + + Sbjct: 62 DAVLAFHRHATSKVHEPRDLARIRTLGFRGEALAAIASVARVRLITRARGEESGVLVRVE 121 Query: 125 GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF 184 G +I P+ GT +EVRDLFF PARL +L+S Q E +V++R ++A+P+V+F Sbjct: 122 GGEIHPPEPIGAPFGTTMEVRDLFFNTPARLKYLRSAQTEQARSVEVVQRESLAHPEVAF 181 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNR 244 T R + G+ E + + G +E+ + + L+GY G PT R Sbjct: 182 VCRTE---RQVLFQTPGRGDAREVWAALYGVGEARMLIEVRGTTGDYALRGYVGRPTQAR 238 Query: 245 GNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKS 304 + Y+FINGR V++ + + AY E + +GRYPV L LE+DP VD NVHP K Sbjct: 239 SSRQHGYLFINGRPVRNPAVQQAVERAYGERLMVGRYPVYALYLEMDPALVDPNVHPQKW 298 Query: 305 YIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 +R + + + +++ A+ + TS+ L+ + + +++A + + + Sbjct: 299 EVRLSEERDVCHLVESAVRAALDNAMLTAAPRVRTSAPLASPVPLNLPEESAGPSEMRQS 358 Query: 359 ATSLTNTQEKL---------------------------FLQENRLSTNDLLPSDDPTYSE 391 + T+ +E+ ++E+ + ++ + +E Sbjct: 359 PSPATDPKERPRVLARSPSFGQGPGRTAAPREAWESALAVRESAAAQVEIEHGTRESQAE 418 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 + E Q + YI+++ + L I+DQHAAHER+++E + + Sbjct: 419 GDGRDVPQERPADWRLRPIGQALRMYILAEDGNDLYIIDQHAAHERVLYEDVLDAWQQGD 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 I LLTP + L +M E+L LG + + FG + I +R IP + Sbjct: 479 IQPMPLLTPLELSLTPSAFEEVMARREELLALGFEIDPFGVHTILVRTIPDSWQGLDYAA 538 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 L+RD++D++ T +D + LAT AC +I++ + EM L R + + + Sbjct: 539 LVRDVLDDLASMGPKATARDIMHR-LATRACKAAIKAHDSLTMPEMEALCRRLTRARDPY 597 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP F+++ ++ K F R Sbjct: 598 HCPHGRPIFLRMSERELAKSFRR 620 >gi|322386540|ref|ZP_08060167.1| DNA mismatch repair protein HexB [Streptococcus cristatus ATCC 51100] gi|321269459|gb|EFX52392.1| DNA mismatch repair protein HexB [Streptococcus cristatus ATCC 51100] Length = 648 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 187/636 (29%), Positives = 304/636 (47%), Gaps = 47/636 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 3 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 63 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATEAGQHGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 123 LLVAQGGEIEKHEPTSSSVGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 183 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+I ++ ++ + ++ + + +T LP Sbjct: 300 HPTKQEVRISKERELMALISQAIATSLKEQDLIPDALENLAKSTVKRATKPEQTSLPLKE 359 Query: 360 TSLTNTQE------KLFLQENRLSTNDLLPS----------------------------- 384 L +E K + E +LS +L Sbjct: 360 NRLYYDKEQNDFFLKPQVAEQQLSFEELAKPVHQATDEKAEPQPTSVKFAERKPVSYDQL 419 Query: 385 -----DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 D + D +E+ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 DHPELDQASLERAVDKLEQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERVK 479 Query: 440 FEKMRQDFNSTKI-TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E R+ Q LL P I + + I + E L GI E +G N +R Sbjct: 480 YEYYREKIGDVDNSQQQQLLVPYIFEFPADDMLRIKQRMELLEDAGIFLEEYGANQFILR 539 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 540 EHPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSAR 598 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 599 DLLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 634 >gi|172087927|emb|CAQ35199.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] Length = 669 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 171/670 (25%), Positives = 302/670 (45%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-------------------------- 333 HP K +R + I+ IQ+A + + Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 334 ---SSVLSKKMISSFHQDNAPK----------THLPKYATSLTNTQEKLFLQENRLSTND 380 + +K SS + P Y +T T E L + ND Sbjct: 359 RQNTEDNQEKTFSSEESNRKPFMVENQNDEIVIREDSYNPFVTKTSESLIADDESSGYND 418 Query: 381 LLPSDDPTYSEDNDPVEESEA------------------------------------THY 404 D+ + + + ++E + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSNDDTSVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 Q+H YII+Q G+ ++DQHAA ER+ +E R Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|73662773|ref|YP_301554.1| DNA mismatch repair protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123761519|sp|Q49X89|MUTL_STAS1 RecName: Full=DNA mismatch repair protein mutL gi|72495288|dbj|BAE18609.1| DNA mismatch repair protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 655 Score = 503 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 175/656 (26%), Positives = 310/656 (47%), Gaps = 68/656 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERP +KEL+EN++DA+++ + + G + ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPGSVVKELLENAIDAQATEINIEVEQSGVASIRVVDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + RH TSK+ DD +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIHIDDLGLVFHRHATSKLDADDDLFHIRTLGFRGEALASISSVAKVTLSTCT-DNEEGQ 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + +I +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 QIYVENGEILDQKPAKAKRGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + + K N +G E +S++ G + V ++ +++ L+G+ Sbjct: 182 PDIRISLISDGKTIMKTN---GSGRTNEVMSEIYGMKVAKDLVHISGDTSDYHLEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GRYP+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFLLNKAILEGYHTLLMIGRYPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----KMISSFHQ---DNAP 351 HP K +R + N I++ I++A + + + + K K++ F Q D Sbjct: 299 HPTKLEVRLSKEDQLFNLIVEKIREAFKDRILIPQNDMDKITKKNKVLDQFEQQKLDFEK 358 Query: 352 KTHLPKYATSLTNTQEK--------------------LFLQENRLSTNDLLPSDD----- 386 K ++ + + +E + +EN S + SDD Sbjct: 359 KQQQENHSQPVNSHEEDEKNDDKAYHSSQTHYEPTDYILKEENNTSVSTSPNSDDDYTQT 418 Query: 387 ----------------------------PTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 + S+ V + + Q+H YI Sbjct: 419 QKSVLYDLENENQSEFINEADFDSDISNHSDSDIKGSVSKDPSRRVPYMEVVGQVHGTYI 478 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 I+Q +G+ ++DQHAA ER+ +E R+ Q LL P E +I +H E Sbjct: 479 IAQNENGMYMIDQHAAQERIKYEYFREKIGEVTNEIQNLLIPLTFHFSTDELMIINQHKE 538 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +L ++G+ E FG N + P ++++D+I+ +++ ++ E+ Sbjct: 539 ELDKVGVHLEPFGGNDYIVDSYPVWFPTAEAEEIIKDMIEYVLEHKKV-NVKKIREDAAI 597 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C SI++ +++ EM L+ ++ + + C HGRP I ++E+LF R Sbjct: 598 MMSCKKSIKANHYLKNNEMADLVNQLRETEDPFTCPHGRPIIINFSNYELERLFKR 653 >gi|330686132|gb|EGG97752.1| DNA mismatch repair protein, C-terminal domain protein [Staphylococcus epidermidis VCU121] Length = 649 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 176/650 (27%), Positives = 311/650 (47%), Gaps = 62/650 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA+S+ + + G + ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAQSTEINIEVEQSGVASIRVVDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ + RH TSK+ DD +I T GFRGEAL SI +VS +TL + N G Sbjct: 63 GIEADDLSLVFHRHATSKLDADDDLFHIRTLGFRGEALASISSVSKVTLRTCT-DNENGH 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYAENGEIINQKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + + K N +G E ++++ G + V + +++ L+GY Sbjct: 182 PDIRISLVSDGKTLLKTN---GSGKTNEVMAEIYGMKVAKDLVHITGDTSDYHLEGYVAR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GRYP+ + +++DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFVLNKAIVEGYHTLLTIGRYPICYINIQMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQ------- 347 HP K +R + + I++ I++A K + + L K+++SF Q Sbjct: 299 HPTKLEVRLSKEEQLYDLIVEKIREAFKDKILIPKNDLDTHPKKNKVLNSFEQQKLDFER 358 Query: 348 ---DNAPKTHLPK-------YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP-- 395 ++ ++HL + ++ + Q N + + L ND Sbjct: 359 KQIEDPNRSHLSEDEKQDELSGSAFEKDNNQNISQVNEDNESTLFNDSQYIKRNHNDHYF 418 Query: 396 -------------------------------VEESEATHYQLGIACAQIHQNYIISQTTD 424 V S Q+H YII+Q + Sbjct: 419 NNQKDILNELDNQNETLEQEEDRNENDIKGAVSASTRRRVPYMEVVGQVHGTYIIAQNEN 478 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 G+ ++DQHAA ER+ +E R+ Q LL P + E +I ++ E+L R+G Sbjct: 479 GMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPMTFHFSKDEQFIIDQYQEELDRVG 538 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 + E FG + + P K ++++D+I+ ++++ ++ E+ M+C Sbjct: 539 VHLEHFGGHDYIVNSYPVWFPKAEAEEIIKDMIELVLENKKID-VKKMREDAAIMMSCKK 597 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ +++ EM L+ ++ + + C HGRP I ++EKLF R Sbjct: 598 SIKANHYLKNNEMADLIDQLREMEDPFTCPHGRPIIINFSNYELEKLFKR 647 >gi|319745993|gb|EFV98275.1| DNA mismatch repair protein HexB [Streptococcus agalactiae ATCC 13813] Length = 676 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 174/645 (26%), Positives = 304/645 (47%), Gaps = 56/645 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + + NQIAAGE++ERPS +KEL+EN++DA SS++ + G QITDNG Sbjct: 22 KIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDNGE 81 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMTSE+ ++++RH TSKI D I T GFRGEALPSI ++S +T+ + Q G Sbjct: 82 GMTSEDAVLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSIASISLMTIKTATEQGKQGT 141 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G I V+ GT + V +LFF PARL ++KS Q E I D++ R+++A+ Sbjct: 142 LLVAKGGNIEKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELAHIIDIVNRLSLAH 201 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT K S G+ + I+ + G + +E++ + + GY + Sbjct: 202 PEVAFTLINDGKEMTK---TSGTGDLRQAIAGIYGLNTAKKMIEISNADLDFEISGYVSL 258 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + +I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 259 PELTRANRNYITLLINGRYIKNFLLNRSILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 318 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + + I +I +++ + + ++ + S+ D +T Sbjct: 319 HPTKQEVRISKERELMSLISSAISESLKQYDLIPDALENLAKTSTRSVDKPIQTSFSLKQ 378 Query: 357 ------------------------------------------KYATSLTNTQEKLFLQEN 374 T + + + Sbjct: 379 SGLYYDRTKNDFFIDADTVSEPIANFTNLDKSDGSVDNDVKNSVNQGATQSPNIKYASRD 438 Query: 375 RLSTNDLLPSDDPTYSEDN-----DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + S D S+ + + ++ E++ + Q+H Y+ +Q GL I+ Sbjct: 439 QADSENFIHSQDYLSSKQSLNKLVEKLDSEESSTFPELEFFGQMHGTYLFAQGNGGLYII 498 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQHAA ER+ +E R+ + Q LL P + + + + E L +GI E Sbjct: 499 DQHAAQERVKYEYYREKIGEVDNSLQQLLVPFLFEFSSSDFLQLQEKMSLLQDVGIFLEP 558 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 +G N +RE P + ++ + + ++ D ++ ++ +++ + M+C SI++ Sbjct: 559 YGNNTFILREHPIWMKEEEVESGVYEMCDMLLLTNEV-SVKKYRAELAIMMSCKRSIKAN 617 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL ++ + N C HGRP + +D+EK+F R Sbjct: 618 HTLDDYSARHLLDQLAQCKNPYNCPHGRPVLVNFTKADMEKMFKR 662 >gi|227544211|ref|ZP_03974260.1| DNA mismatch repair protein MutL [Lactobacillus reuteri CF48-3A] gi|300908207|ref|ZP_07125673.1| DNA mismatch repair protein MutL [Lactobacillus reuteri SD2112] gi|133930483|gb|ABO43813.1| MutL [Lactobacillus reuteri] gi|227185804|gb|EEI65875.1| DNA mismatch repair protein MutL [Lactobacillus reuteri CF48-3A] gi|300894634|gb|EFK87990.1| DNA mismatch repair protein MutL [Lactobacillus reuteri SD2112] Length = 668 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 180/653 (27%), Positives = 300/653 (45%), Gaps = 64/653 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + NQIAAGE+IERP+ +KEL+ENSLDA S RV+ ++ G ++ D+G Sbjct: 3 KIHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+I +A RH TSKI+ D + T GFRGEALPSI +V+ +TL + G Sbjct: 63 GIAAEDIRLAFHRHATSKINSRHDLFKVQTMGFRGEALPSIASVADVTLTTAQAGQEEGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + G K V+P GT ++V DLFF PARL +LKS Q E ITD+I R+A+A Sbjct: 123 MIHLRGGKELVVKPAGARQGTDIKVTDLFFNTPARLKYLKSPQTELTRITDIINRLALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F+F+ ++ + N N + ++ + G +E++ ++ + G+ + Sbjct: 183 PAVAFSFTHNGR---ELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDDFKVSGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + + IN R +++ + I Y + +GRYP+ V+ +++DP VDVNV Sbjct: 240 PELTRASRQYITITINHRYIRNFELTKAITQGYESKLMVGRYPIAVINIDLDPVLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST------------------------SS 335 HPAK +R + I ++I++ I + + S Sbjct: 300 HPAKREVRLSKEQQLIKLIAETIRQRIAVENLIPDVDADQFIPNDDEVADLDRRLKEASP 359 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQEN--------------RLSTNDL 381 V IS+ T + A + L + + D Sbjct: 360 VYHAAPISAVPATEKAATEISTPAADNPAHADALDSEIPAPIVIHHLEDLNTLAMQKFDE 419 Query: 382 LPSDDPTYSEDNDPV--------------------EESEATHYQLGIACAQIHQNYIISQ 421 ++ + + PV ++ + + Q+ ++++Q Sbjct: 420 RYQNEGEVTPFSAPVPTMTKKPVKPANIELDVHDKQDQQQNRFPDLQYIGQLQGTFLLAQ 479 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 DGL IVDQHAA ER+ +E RQ Q L P +++ + I +H + L Sbjct: 480 AGDGLYIVDQHAAQERINYEYYRQKIGEVSADQQNFLVPLVLNYSTVDAMTINQHLDTLA 539 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 +G++ E FG N+ +R P + +++ID +I + T+++ M+ Sbjct: 540 AVGLELESFGQNSFILRSHPTWFKEGQEEDTAKEMIDWLIKNGK-LTVKEFRMKTAIMMS 598 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C +I++ + E LL+ + + N C HGRP + D+EK+F R Sbjct: 599 CKRAIKANHHLDEREAKALLKRLPQCENPFNCPHGRPVTVHFNDQDLEKMFKR 651 >gi|323703570|ref|ZP_08115215.1| DNA mismatch repair protein MutL [Desulfotomaculum nigrificans DSM 574] gi|323531473|gb|EGB21367.1| DNA mismatch repair protein MutL [Desulfotomaculum nigrificans DSM 574] Length = 627 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 190/630 (30%), Positives = 304/630 (48%), Gaps = 42/630 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E NQIAAGE++ERP +KEL+ENSLDA ++R+ + GG S ++ DNG Sbjct: 3 RIIVLDETTANQIAAGEVVERPVSVVKELVENSLDAGATRIIVELTQGGLSGIKVVDNGC 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E+ + QRH TSKI D + I T GFRGEALPSI +V+ LTL +R ++ G Sbjct: 63 GMSPEDAMLCWQRHATSKIRQAADLNRITTLGFRGEALPSIASVAKLTLTTRAGEDLAGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + +I PV GT +EV++LFF PAR +LKS E ++D+I R+A+A Sbjct: 123 EVLVEAGQILRSSPVGCPAGTTIEVKELFFNTPARRKYLKSPHAEAGQVSDLINRLALAR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V + + F NG+ + + V G D + + +E+N + ++G Sbjct: 183 PDVRIELRSNGRVVF---FSPGNGSLRDTAAAVFGADNVRSMIEVNYQGRLFCIKGLISK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + FINGR ++ I S ++ AY IP GR+P+ VL + +DP QVDVNV Sbjct: 240 PVLTRASRQYQSFFINGRYIRSGLISSVLQQAYQTQIPSGRFPIAVLHISLDPTQVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN-----------------------------KKG 330 HP K +R + ++ ++ + +N + Sbjct: 300 HPTKMEVRLAQEKEVAEELLAALSEPLNLPPAITGLWEIMPGRQHQSAKKITPVASPQPE 359 Query: 331 ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQE---KLFLQENRLSTNDLLPSDDP 387 K + DN + L + T TQ + ++ ++T + + Sbjct: 360 QIKDISEEKSELPPLAPDNGVRKQLSWPLAADTVTQSEVKPVVTKQVPIATGNPIKPQLA 419 Query: 388 TYSEDNDPVEESE--ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 + + + +E A + Q+ Y+++Q T GL I+DQHAAHER+++EK Sbjct: 420 NHQKVLEVSQEYSTGAEVFPNLSPVGQVLPTYVLAQGTTGLYIIDQHAAHERVLYEKYLH 479 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 + SQ LL P + L E LI+EH + G E FG + +R +P Sbjct: 480 QLQ-QGVQSQVLLNPLTLQLSHHEAQLIIEHILEFSEFGFILEHFGGDTFLLRGVPPQAG 538 Query: 506 KKNIPQLLRDIIDEIIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 K I + D++ + D+ I+++ A MAC +I++G+++ E+ LL + Sbjct: 539 NKPIE-IFMDLLTRLQDNPANRLDRGLIIDHLAAVMACRDAIKAGQRLGPTEIMALLDGL 597 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRPT I + +++K F R Sbjct: 598 AECQRPFTCPHGRPTVINITHEELKKRFKR 627 >gi|77405115|ref|ZP_00782214.1| DNA mismatch repair protein HexB [Streptococcus agalactiae H36B] gi|77410860|ref|ZP_00787217.1| DNA mismatch repair protein HexB [Streptococcus agalactiae CJB111] gi|77163078|gb|EAO74032.1| DNA mismatch repair protein HexB [Streptococcus agalactiae CJB111] gi|77176258|gb|EAO79028.1| DNA mismatch repair protein HexB [Streptococcus agalactiae H36B] Length = 659 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 174/645 (26%), Positives = 304/645 (47%), Gaps = 56/645 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + + NQIAAGE++ERPS +KEL+EN++DA SS++ + G QITDNG Sbjct: 5 KIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDNGE 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMTSE+ ++++RH TSKI D I T GFRGEALPSI ++S +T+ + Q G Sbjct: 65 GMTSEDAVLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSIASISLMTIKTATEQGKQGT 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G I V+ GT + V +LFF PARL ++KS Q E I D++ R+++A+ Sbjct: 125 LLVAKGGNIEKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELAHIIDIVNRLSLAH 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT K S G+ + I+ + G + +E++ + + GY + Sbjct: 185 PEVAFTLINDGKEMTK---TSGTGDLRQAIAGIYGLNTAKKMIEISNADLDFEISGYVSL 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + +I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 242 PELTRANRNYITLLINGRYIKNFLLNRSILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + + I +I +++ + + ++ + S+ D +T Sbjct: 302 HPTKQEVRISKERELMSLISSAISESLKQYDLIPDALENLAKTSTRSVDKPIQTSFSLKQ 361 Query: 357 ------------------------------------------KYATSLTNTQEKLFLQEN 374 T + + + Sbjct: 362 PGLYYDRTKNDFFIDADTVSEPIANFTNLDKSDGSVDNDVKNSVNQGATQSPNIKYASRD 421 Query: 375 RLSTNDLLPSDDPTYSEDN-----DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + S D S+ + + ++ E++ + Q+H Y+ +Q GL I+ Sbjct: 422 QADSENFIHSQDYLSSKQSLNKLVEKLDSEESSTFPELEFFGQMHGTYLFAQGNGGLYII 481 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQHAA ER+ +E R+ + Q LL P + + + + E L +GI E Sbjct: 482 DQHAAQERVKYEYYREKIGEVDNSLQQLLVPFLFEFSSSDFLQLQEKMSLLQDVGIFLEP 541 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 +G N +RE P + ++ + + ++ D ++ ++ +++ + M+C SI++ Sbjct: 542 YGNNTFILREHPIWMKEEEVESGVYEMCDMLLLTNEV-SVKKYRAELAIMMSCKRSIKAN 600 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL ++ + N C HGRP + +D+EK+F R Sbjct: 601 HTLDDYSARHLLDQLAQCKNPYNCPHGRPVLVNFTKADMEKMFKR 645 >gi|312865750|ref|ZP_07725972.1| DNA mismatch repair protein, C-terminal domain protein [Streptococcus downei F0415] gi|311098625|gb|EFQ56847.1| DNA mismatch repair protein, C-terminal domain protein [Streptococcus downei F0415] Length = 651 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 175/639 (27%), Positives = 305/639 (47%), Gaps = 50/639 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE++ERPS +KEL+EN++DA S+++ I G Q+TDNG Sbjct: 3 KIIELPEVLANQIAAGEVVERPSSVVKELVENAIDAGSTQITVEIEESGLKKIQVTDNGQ 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ ++++RH TSKI + D I T GFRGEALPSI ++S LT+ + + G Sbjct: 63 GIENDDVALSLRRHATSKIKNQADLFRIRTLGFRGEALPSIASISDLTIKTAVKGADYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I S P++ GT + V DLFF PARL ++KS Q E I DVI R ++ + Sbjct: 123 LLVAKGGEILSQEPISTPVGTKITVEDLFFNTPARLKYMKSLQAELGHIVDVINRQSLGH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++F ++ + G+ + I+ + G VE++ + + GY + Sbjct: 183 PEIAFILINEGR---ELTKTAGTGDLRQAIAGIYGLTTAKKMVEISNSDLDFKVSGYISL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I ++I +++ ++ + ++ + S + +T LP Sbjct: 300 HPTKQEVRISKEKELMQLIREAIAESLREQDLIPDALENLAKSSVRKVEKPVQTSLPLKQ 359 Query: 360 TSLTNTQ--------------------------------------------EKLFLQENR 375 TSL Q ++ + Sbjct: 360 TSLYYDQKRQDFFLKSDNQIAENQSGPASEPVNQVDNSVKSVSSSTSVKQAQRPQPEGQD 419 Query: 376 LSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 D+ S + D ++ E++ + Q+ Y+ +Q GL I+DQHAA Sbjct: 420 GEHPDIDFSKKAQTHKLMDRLDREESSAFPELDYFGQMQGTYLFAQGQGGLYIIDQHAAQ 479 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 ER+ +E R+ + Q LL P + + + + E L+++GI E +G N Sbjct: 480 ERVKYEYYREKIGDVDSSLQQLLVPYLFEFRAEDFINLQEKMPLLNQVGIYLEPYGNNTF 539 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 +RE P + ++ I + ++ D ++ ++ +++ + M+C SI++ + Sbjct: 540 ILREHPIWMKEEEIESGVYEMCDMLLLTNQV-SIKVYRAELAIMMSCKRSIKANHALDDY 598 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 599 SARNLLVQLSQCKNPYNCPHGRPVLVNFTKSDMEKMFRR 637 >gi|76787614|ref|YP_330627.1| DNA mismatch repair protein [Streptococcus agalactiae A909] gi|123744498|sp|Q3JYM6|MUTL_STRA1 RecName: Full=DNA mismatch repair protein mutL gi|76562671|gb|ABA45255.1| DNA mismatch repair protein HexB [Streptococcus agalactiae A909] Length = 657 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 174/645 (26%), Positives = 304/645 (47%), Gaps = 56/645 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + + NQIAAGE++ERPS +KEL+EN++DA SS++ + G QITDNG Sbjct: 3 KIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMTSE+ ++++RH TSKI D I T GFRGEALPSI ++S +T+ + Q G Sbjct: 63 GMTSEDAVLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSIASISLMTIKTATEQGKQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G I V+ GT + V +LFF PARL ++KS Q E I D++ R+++A+ Sbjct: 123 LLVAKGGNIEKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELAHIIDIVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT K S G+ + I+ + G + +E++ + + GY + Sbjct: 183 PEVAFTLINDGKEMTK---TSGTGDLRQAIAGIYGLNTAKKMIEISNADLDFEISGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + +I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITLLINGRYIKNFLLNRSILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + + I +I +++ + + ++ + S+ D +T Sbjct: 300 HPTKQEVRISKERELMSLISSAISESLKQYDLIPDALENLAKTSTRSVDKPIQTSFSLKQ 359 Query: 357 ------------------------------------------KYATSLTNTQEKLFLQEN 374 T + + + Sbjct: 360 PGLYYDRTKNDFFIDADTVSEPIANFTNLDKSDGSVDNDVKNSVNQGATQSPNIKYASRD 419 Query: 375 RLSTNDLLPSDDPTYSEDN-----DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + S D S+ + + ++ E++ + Q+H Y+ +Q GL I+ Sbjct: 420 QADSENFIHSQDYLSSKQSLNKLVEKLDSEESSTFPELEFFGQMHGTYLFAQGNGGLYII 479 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQHAA ER+ +E R+ + Q LL P + + + + E L +GI E Sbjct: 480 DQHAAQERVKYEYYREKIGEVDNSLQQLLVPFLFEFSSSDFLQLQEKMSLLQDVGIFLEP 539 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 +G N +RE P + ++ + + ++ D ++ ++ +++ + M+C SI++ Sbjct: 540 YGNNTFILREHPIWMKEEEVESGVYEMCDMLLLTNEV-SVKKYRAELAIMMSCKRSIKAN 598 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL ++ + N C HGRP + +D+EK+F R Sbjct: 599 HTLDDYSARHLLDQLAQCKNPYNCPHGRPVLVNFTKADMEKMFKR 643 >gi|77408142|ref|ZP_00784888.1| DNA mismatch repair protein HexB [Streptococcus agalactiae COH1] gi|77173242|gb|EAO76365.1| DNA mismatch repair protein HexB [Streptococcus agalactiae COH1] Length = 659 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 174/645 (26%), Positives = 304/645 (47%), Gaps = 56/645 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + + NQIAAGE++ERPS +KEL+EN++DA SS++ + G QITDNG Sbjct: 5 KIIELPDILANQIAAGEVVERPSSVVKELVENAIDAGSSQITIEVEESGLKKIQITDNGE 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMTSE+ ++++RH TSKI D I T GFRGEALPSI ++S +T+ + Q G Sbjct: 65 GMTSEDAVLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSIASISLMTIKTATEQGKQGT 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G I V+ GT + V +LFF PARL ++KS Q E I D++ R+++A+ Sbjct: 125 LLVAKGGNIEKQEVVSSPRGTKILVENLFFNTPARLKYMKSLQSELAHIIDIVNRLSLAH 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT K S G+ + I+ + G + +E++ + + GY + Sbjct: 185 PEVAFTLINDGKEMTK---TSGTGDLRQAIAGIYGLNTAKKMIEISNADLDFEISGYVSL 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + +I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 242 PELTRANRNYITLLINGRYIKNFLLNRSILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + + I +I +++ + + ++ + S+ D +T Sbjct: 302 HPTKQEVRISKERELMSLISSAISESLKQYDLIPDALENLAKTSTRSVDKPIQTSFSLKQ 361 Query: 357 ------------------------------------------KYATSLTNTQEKLFLQEN 374 T + + + Sbjct: 362 SGLYYDRTKNDFFIDADTVSEPIANFTNLDKSDGSVDNDVKNSVNQGATQSPNIKYASRD 421 Query: 375 RLSTNDLLPSDDPTYSEDN-----DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + S D S+ + + ++ E++ + Q+H Y+ +Q GL I+ Sbjct: 422 QADSENFIHSQDYLSSKQSLNKLVEKLDSEESSTFPELEFFGQMHGTYLFAQGNGGLYII 481 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQHAA ER+ +E R+ + Q LL P + + + + E L +GI E Sbjct: 482 DQHAAQERVKYEYYREKIGEVDNSLQQLLVPFLFEFSSSDFLQLQEKMSLLQDVGIFLEP 541 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 +G N +RE P + ++ + + ++ D ++ ++ +++ + M+C SI++ Sbjct: 542 YGNNTFILREHPIWMKEEEVESGVYEMCDMLLLTNEV-SVKKYRAELAIMMSCKRSIKAN 600 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL ++ + N C HGRP + +D+EK+F R Sbjct: 601 HTLDDYSARHLLDQLAQCKNPYNCPHGRPVLVNFTKADMEKMFKR 645 >gi|291484260|dbj|BAI85335.1| DNA mismatch repair protein [Bacillus subtilis subsp. natto BEST195] Length = 629 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 183/628 (29%), Positives = 311/628 (49%), Gaps = 40/628 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K+ +LS+++ N+IAAGE++ERP+ +KEL+EN++DA+S+ +E I G + ++ DNG Sbjct: 5 KVIQLSDELSNKIAAGEVVERPASVVKELVENAIDADSTVIEIDIEEAGLASIRVLDNGE 64 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +E+ A +RH TSKI D D + T GFRGEALPSI +VSHL + + G Sbjct: 65 GMENEDCKRAFRRHATSKIKDENDLFRVRTLGFRGEALPSIASVSHLEITTST-GEGAGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G I S + GT + V +LFF PARL ++K+ E ITDV+ R+A+A+ Sbjct: 124 KLVLQGGNIISESRSSSRKGTEIVVSNLFFNTPARLKYMKTVHTELGNITDVVNRIALAH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + + NG+ ++ + G + L+ S + ++GY + Sbjct: 184 PEVSIRLRHHGK---NLLQTNGNGDVRHVLAAIYGTAVAKKMLPLHASSLDFEVKGYIAL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +NGR +++ ++ + Y +P+GR+P+ + + +DP VDVNV Sbjct: 241 PEITRASRNYMSSVVNGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA--------- 350 HP+K +R T + + I I+ ++ + S+ L KK + Sbjct: 301 HPSKLEVRLSKETELHDLIRDGIKDVFKQQQLIPSAQLPKKSAPVIKNEQQFITFDEKPP 360 Query: 351 -----PKTHLPKYA------------------TSLTNTQEKLFLQENRLSTNDLLPSDDP 387 K H P Y+ L + QE L +D+ Sbjct: 361 ERKVPEKAHAPSYSPMKLSSVVKEPIDAEEELPPLQFDAPSIVDQEQTLEVSDVSEELPE 420 Query: 388 TYSEDNDPVEESEATHY-QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 T+ ++ ++ A+ + Q+H YI++Q +GL I+DQHAA ER+ +E R+ Sbjct: 421 TFEQECHEEQQQPASERVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREK 480 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 + Q ++ P E +I +H ++L +G+ E FG N+ +R PA K Sbjct: 481 VGEVEPEVQDMIVPLTFHYSTNEALIIEQHKQELESVGVFLESFGSNSYIVRCHPAWFPK 540 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 +L+ +II +++DS ++ E M+C GSI++ R +++ E+ LL ++ Sbjct: 541 GEEAELIEEIIQQVLDSKNID-IKKLREEAAIMMSCKGSIKANRHLRNDEIKALLDDLRS 599 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP I ++EK+F R Sbjct: 600 TSDPFTCPHGRPIIIHHSTYEMEKMFKR 627 >gi|89902077|ref|YP_524548.1| DNA mismatch repair protein MutL [Rhodoferax ferrireducens T118] gi|89346814|gb|ABD71017.1| DNA mismatch repair protein MutL [Rhodoferax ferrireducens T118] Length = 664 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 191/651 (29%), Positives = 327/651 (50%), Gaps = 61/651 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +L +++I+QIAAGE++ERP+ ++EL++N+LDA +++V + GG + D+G Sbjct: 15 PILELPDELISQIAAGEVVERPASVVRELVDNALDAGATQVTVRLLAGGVRLIAVEDDGA 74 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+PMA +RH TSKIS D ++ T GFRGEAL +I +++ + SR N Sbjct: 75 GILREELPMAFKRHATSKISSLTDLESVGTMGFRGEALAAINSIADCVIRSRATGQNNAY 134 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ +PVA + GT VEV++LFF+ PAR FLK++ E + +RR A+A Sbjct: 135 LLDGGSGEL---QPVARSTGTTVEVKELFFSTPARRKFLKTDATELAHCVEAVRRHALAR 191 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNG----NFPERISQVIGEDFINNAVELNEK-------- 227 P V F + G +R++ V+G +F+ +V ++ + Sbjct: 192 PDVGFAIWHEGKLVEQWRRCEGRGPALAALEQRLADVLGAEFVARSVWVDFQSSTSPGRS 251 Query: 228 --SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVV 285 + I + G GIP R A+Q + ++NGR V+DK + R+AY + + R PV Sbjct: 252 DNTPSIRVWGRAGIPDAARARADQQFAYVNGRFVRDKVLSHAARSAYDDVLHGQRQPVFA 311 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---VLSKKMI 342 L +EIDP +VDVNVHP K +RFR+ + + +++ A+ + +++ ++ + Sbjct: 312 LYVEIDPTRVDVNVHPTKIEVRFRDSREVHQAVRHALEDALAAPRVGSATSLGTTGRQSV 371 Query: 343 SSFHQDNAPKTHLP------KYATSLTNTQEKLFL---------------QENRLSTNDL 381 ++ + AP+ P + + + Q + Q + + L Sbjct: 372 AAANAGLAPEPSAPVVYIQNQSLAPVISEQAAINFGVQTGHRVSDLGALWQPDGAAPVGL 431 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 P + LG A AQ+ YI+++ GL+IVD HAAHER+++E Sbjct: 432 HNKPALAAPLTAPPAAPLPGGDWPLGRALAQLQGIYILAENAQGLIIVDMHAAHERIVYE 491 Query: 442 KMRQDFNSTK------------------ITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 +++ + + SQ LL P E H + L L Sbjct: 492 RLKAQWRERGSAVNATSGWIGSSATRPGLASQPLLIPATFAATPSEVTTAEAHVDTLQTL 551 Query: 484 GIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY 543 G++ F +A+R +P L++ + +L R ++ E+ + ++ +L++MAC+ Sbjct: 552 GLEITAFSAKTLAVRAVPTTLAQGDAVELARGVLAELAQHEASTVIERAQNELLSSMACH 611 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 G++R+ R++ EMN LLR+ME S QCNHGRPT+ + KLS+++ LF R Sbjct: 612 GAVRANRRLTLEEMNALLRQMEATERSDQCNHGRPTWRQFKLSELDALFLR 662 >gi|325689188|gb|EGD31195.1| DNA mismatch repair protein HexB [Streptococcus sanguinis SK115] Length = 688 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 184/635 (28%), Positives = 301/635 (47%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KEL+ENS+DA +S++ I G Q+TDNG Sbjct: 44 KIIELPEILANQIAAGEVIERPSSVVKELVENSIDAGASQITIEIEEAGLKSIQVTDNGE 103 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A++RH TSKI D I T GFRGEA+PSI +VS T+ + G Sbjct: 104 GIDHEDVPLALRRHATSKIKKQADLFRIRTLGFRGEAIPSIASVSRFTIETATEAGQHGT 163 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I P + GT +++ DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 164 LLVAQGGEIEEHEPTSSPLGTKIKIEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 223 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + + +GN + I+ + G VE++ + + GY + Sbjct: 224 PEVAFTLISDGREMTR---TAGSGNLRQAIAGIYGLATAKKMVEISASDLDFEVSGYVSL 280 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 281 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVINIQIDPYLADVNV 340 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I ++ ++ + ++ + + +T LP Sbjct: 341 HPTKQEVRISKERELMALISQAIATSLKEQDLIPDALENLAKSTVKRATKPEQTSLPLKE 400 Query: 357 -----------------------KYATSLTNTQEKLFLQENRLSTN-------------- 379 + S E + ST+ Sbjct: 401 NRLYYDKEQNDFFLKPQVAEQQLSFEESAKPVHEATDEKVEPQSTSVKFAERKPVSYDQL 460 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 D D + D +++ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 461 DHPELDQASLERAVDKLKQEEKSSFPELEYFGQMHGTYLFAQGKGGLYIIDQHAAQERVK 520 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E R+ + Q LL P I + + I + E L GI E +G N +RE Sbjct: 521 YEYYREKIGDVDNSQQQLLVPYIFEFPADDMLRIKQRIELLEDAGIFLEEYGANQFILRE 580 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 581 HPIWFKEEEIEAGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSARD 639 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + SD+EK+F R Sbjct: 640 LLFQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 674 >gi|329114388|ref|ZP_08243150.1| DNA mismatch repair protein MutL [Acetobacter pomorum DM001] gi|326696464|gb|EGE48143.1| DNA mismatch repair protein MutL [Acetobacter pomorum DM001] Length = 646 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 229/628 (36%), Positives = 352/628 (56%), Gaps = 41/628 (6%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R+L E I+N+IAAGE+IERP+ A+KEL+EN++DA + R+E +AGGG +TD+G GM Sbjct: 22 RRLPEVIVNRIAAGEVIERPAAAVKELVENAIDAGARRLEVSLAGGGVDRIIVTDDGVGM 81 Query: 64 TSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 +++++ +AV RHCTSK+ D+ +I T GFRGEALPSIGA + L + SRP + +I Sbjct: 82 SADDLALAVDRHCTSKLRDETLVHISTLGFRGEALPSIGAAARLCITSRPKGESGAWRIR 141 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + G K+S V P A PGT V V DLFF PAR FLKS +VE +V+RR+A+A P+ Sbjct: 142 VEGGKVSPVEPAAGAPGTSVVVEDLFFATPARRKFLKSARVEGRHAENVVRRLALAVPQT 201 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 +F F + + + + R + ++ + +E++ + + +TL G+ P+ Sbjct: 202 AFRFVLDERVLFDLPA----QDMAARSAALLDASEADGFLEISGERDGMTLSGFICPPSV 257 Query: 243 NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPA 302 +R AN ++ +NGR V D + + +R AY I GR+PVV ++L + P +VDVNVHPA Sbjct: 258 HRSTANGQFMLVNGRPVVDPVLKTAVRVAYRRVIEPGRHPVVAIMLTVPPDRVDVNVHPA 317 Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINK----KGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 K+ +RF + +R+ +I +IQ+A+ G+ + + ++ Sbjct: 318 KTELRFADEAGVRSLVIGTIQRALEHGAGSVGMRPVLSSAPRQARIWYPPEKGAAPPMPA 377 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE--------------------- 397 T T E + E RL D + P Sbjct: 378 PAFHTPTPEGVRFAEGRLQFGDAPAARTLPPVAMPSPSAGWDASAVNTPTTGQAASSYVM 437 Query: 398 -----ESEATHYQLGIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTK 451 S A + LG A AQ+ YI++ DG LV+VDQHAAHERL E++R F S Sbjct: 438 DGASGPSVAADHPLGAAIAQVLDTYILAVAADGSLVLVDQHAAHERLTHERLRAQFLSGH 497 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P+++DL + L++ L +LG++ E FG +++ +R +PA+L + Sbjct: 498 VQAQRLLVPDVVDLPRVQVELLLARQPTLEKLGVEIEAFGGDSVLVRALPAMLRSSDAVN 557 Query: 512 LLRDIIDEIIDSSTTYT-----LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 LLRD+ DE+ L R++ ++A MAC+GSIR+GR++ EMN LLR+ME+ Sbjct: 558 LLRDLADELEADENGAPDEMAALDGRLDAVIARMACHGSIRAGRRLSVEEMNALLRQMEE 617 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 P + C+HGRPT++KL +D+EKLFGR Sbjct: 618 TPRAGTCSHGRPTWLKLSKADLEKLFGR 645 >gi|227432073|ref|ZP_03914086.1| DNA mismatch repair protein MutL [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352155|gb|EEJ42368.1| DNA mismatch repair protein MutL [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 651 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 178/632 (28%), Positives = 310/632 (49%), Gaps = 46/632 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+I +LS + NQIAAGE+IERP+ +KEL+EN++DA +++++ ++ G+S ++ DNG Sbjct: 1 MRIHELSNLLANQIAAGEVIERPASVVKELVENAIDAGATQIDVIVEEAGESLIRVVDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++P+A RH TSKIS+ D NI + GFRGEALPSI A+S +TL + + +G Sbjct: 61 EGINPEDVPLAFSRHATSKISNRHDLFNIMSLGFRGEALPSIAAISDVTLNTTTQEAPSG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I G K S P GT+V VRDLF+ PARL +LK Q E + I D++ R+A++ Sbjct: 121 IMYHIKGGKQVSATPANGRRGTVVSVRDLFYNTPARLKYLKRPQTELSRIADIMNRIALS 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 Y V+FT + N + N +GN I+ + G D + + ++ + G+ Sbjct: 181 YTNVAFTVTADGRNILQTN---GDGNQQRVIAAIYGRDVAQKMRAIAGEDDDFNITGFVS 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +P RG+ + + +NGR +++ F+ + + Y + +GR+P+ V+ + DP VDVN Sbjct: 238 LPELTRGSRDYLTILVNGRFIKNFFVSNAVIRGYGSKLMVGRFPMGVININTDPLLVDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS--VLSKKMISSFHQDNAPKTHLP 356 VHP K+ IR + II +++ + + + L ++ ++ + APK P Sbjct: 298 VHPQKAEIRLSKEAELSALIIDTVKSCFADENLIPDAYENLYGQVQTNKIEPPAPKQVAP 357 Query: 357 KYATSLTNTQE-----------------------KLFLQENRLSTNDLLPSDDPTYSEDN 393 ++ T F Q+ N + D+ T Sbjct: 358 WAKPNMEQTIAINTGIDSNEVVINQKADLMNDAVNEFTQKYAHEPNLPIFDDEITVQVSE 417 Query: 394 D---------------PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 D + + + + Q+H ++ +Q+++G ++DQHAA ER+ Sbjct: 418 DISSYNKPEISTQEGLDISPKKPSGFPNLEYIGQMHGTFLFAQSSEGFYLIDQHAAQERV 477 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E R++ Q +L P I+ + I + + +L +G+ E FGP + +R Sbjct: 478 KYEYYRKEIGQVGTNKQRMLVPITINYSVADMLKIADKEAELEAIGLTLEPFGPTTVIVR 537 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P K + +++++D I+ T+ + E M+C S+R+ + ++ Sbjct: 538 EHPTWFEKGQETETIKEMVDWILRDGN-LTVAEFRERTAIMMSCKRSVRANMHLSDLQAR 596 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 LL + N C HGRP L+++EK Sbjct: 597 TLLESLASTENPYNCPHGRPVVTSFTLTEMEK 628 >gi|258509229|ref|YP_003171980.1| DNA mismatch repair protein [Lactobacillus rhamnosus GG] gi|257149156|emb|CAR88129.1| DNA mismatch repair protein mutL [Lactobacillus rhamnosus GG] gi|259650513|dbj|BAI42675.1| DNA mismatch repair protein [Lactobacillus rhamnosus GG] Length = 650 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 170/641 (26%), Positives = 301/641 (46%), Gaps = 53/641 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS + NQIAAGE+IERP+ +KEL+ENS+DA++++++ ++ G ++DNG Sbjct: 3 KIHQLSATLSNQIAAGEVIERPASVVKELVENSIDAQATQIDVKVSAAGLQTIHVSDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A RH TSKI + D N+H+ GFRGEAL SI AV+ +TL + GA Sbjct: 63 GIDPDDVATAFLRHATSKILTTRDLFNVHSLGFRGEALASIAAVADVTLTTAT-DAGIGA 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G ++ S A GT VEV DLFF PARL ++KS+Q E I D++ R+A+A Sbjct: 122 KIHVKGGQVESQTTAAHRRGTDVEVSDLFFNTPARLKYMKSQQTELGKIVDIVSRLALAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PK++FT S + + + G+ + ++ + G + V+ + + + G T + Sbjct: 182 PKIAFTVSHDGNMMVR---TAGQGDLRQTLAGIYGLPVARSMVDFQAEDLDFKVSGLTSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR +++ + + Y + +GRYP+ V+ +++D VDVNV Sbjct: 239 PETTRASRNYLSLVVNGRYIKNFQLTKAVIAGYGSKLMVGRYPMGVISIQMDAALVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS------------------------ 335 HP K+ +R + + + ++I+ + K+ + + Sbjct: 299 HPTKAEVRLSKEDQLSHLLSEAIRARLAKENLIPDAMDNLPKRERYDLDQLELTLNKISP 358 Query: 336 --VLSKKMISSFHQDNAPKTHLPKYATSLTNTQE------------KLFLQENRLSTNDL 381 + ++ T + T+ +F + RL+ D Sbjct: 359 KTTAVPNQGAEVRENADTNTGNTPTSQPAAQTEAAVDLTINDLDDRPIFDEPQRLAAWDQ 418 Query: 382 LPSDDPTY--------SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 + +D + AQ+H Y++++ DGL I+DQHA Sbjct: 419 RYQTLDANVAPALVEDTAASDLKRPEPTERFPDLTYLAQVHGTYLLAEAGDGLYILDQHA 478 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 A ER+ +E RQ Q LL P ++D + I H + L +G+ E FG N Sbjct: 479 AQERVNYEFYRQAIGEVSNDQQHLLVPIVLDYSAADAINIRTHRDVLEAVGLYLEDFGQN 538 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQ 553 + + P +++++D ++ ++ E M+C +I++ + Sbjct: 539 SFVVEHHPTWFKAGQEEDTIKEMVDWVLRDGKI-SVAAFREKTAIMMSCKRAIKANHHLD 597 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL+++ + N C HGRP + +D+EK+F R Sbjct: 598 DQQARALLQKLPQCENPFNCPHGRPVLVHFSNTDLEKMFKR 638 >gi|58698260|ref|ZP_00373179.1| mismatch repair protein MutL [Wolbachia endosymbiont of Drosophila ananassae] gi|225631007|ref|YP_002727798.1| DNA mismatch repair protein MutL [Wolbachia sp. wRi] gi|254766185|sp|C0R515|MUTL_WOLWR RecName: Full=DNA mismatch repair protein mutL gi|58535232|gb|EAL59312.1| mismatch repair protein MutL [Wolbachia endosymbiont of Drosophila ananassae] gi|225592988|gb|ACN96007.1| DNA mismatch repair protein MutL [Wolbachia sp. wRi] Length = 605 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 233/611 (38%), Positives = 351/611 (57%), Gaps = 24/611 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L K IN+IAAGE+IERP+ +KEL+EN++DA S +E I GG++ +TD+G Sbjct: 1 MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSLEIEIKIESGGRNLIIVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ +A RH TSK+SD + I GFRGEALPSI AVS + L S+ + + Sbjct: 61 NGVEKNDLELAFMRHATSKLSDSELIEIKHLGFRGEALPSIAAVSRIKLSSKAREASEAW 120 Query: 120 QIAISG-EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I+ G EKI P +++ GT +EVRDLFF P RL FLK+E+ ET I D++ +A+ Sbjct: 121 SISYEGGEKIGEQTPYSLSQGTHIEVRDLFFATPNRLKFLKTERAETQSIVDIVNNLAMI 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + FT ++ K+ + + R+ +V E+F +++E+NE+ + I L G+ Sbjct: 181 NYHIGFTLTSGNK---KLLKYAKQTSLFHRLCEV-EEEFQGSSLEINEEEDGIKLTGHIC 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 PT NRG + Q Y F+NGR ++D ++ +R AY + IP RYP L LEI QVDVN Sbjct: 237 KPTVNRGKSTQIYTFVNGRPIKDNLLIGAVRYAYHDFIPSDRYPFAALHLEIPYDQVDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP KS +RF+N +I + + + KA++++ + + K + + P + Sbjct: 297 VHPNKSEVRFQNKKLIYEIMTRGLIKALSRRIGTFPAHDQKMDSTLPDPFDKPDVQNERR 356 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT--------------HY 404 + N K F N + S Y+ ++EA + Sbjct: 357 PSPFENQLIKEFASPNEKAKGLSEQSKSFDYTGIQKFPAQAEAMVLEKKVLEQVDLIESH 416 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 LG A Q++ YII++ D L+IVDQHAAHERL++E ++ + I Q LL PE ++ Sbjct: 417 PLGFARCQVYNTYIIAEVRDKLIIVDQHAAHERLVYECLK---QKSSIKRQKLLLPETVE 473 Query: 465 L-LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 + + +I + + L +G E N + ++EIPAIL ++ ++L +IID + + Sbjct: 474 IKNQAGMEMIEIYKDKLFEMGFDIEIKSENKVIVKEIPAILGAIDVKEMLINIIDRLTEI 533 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 T ++D++ ILAT+AC+GSIR+GRKM+ EMN LLR+MEK P S QCNHGRPT+I++ Sbjct: 534 EDTLPVEDKVNKILATIACHGSIRAGRKMRLDEMNELLRQMEKTPYSGQCNHGRPTYIEM 593 Query: 584 KLSDIEKLFGR 594 KLSDIEKLF R Sbjct: 594 KLSDIEKLFER 604 >gi|260887306|ref|ZP_05898569.1| DNA mismatch repair protein MutL [Selenomonas sputigena ATCC 35185] gi|330838940|ref|YP_004413520.1| DNA mismatch repair protein MutL [Selenomonas sputigena ATCC 35185] gi|260862942|gb|EEX77442.1| DNA mismatch repair protein MutL [Selenomonas sputigena ATCC 35185] gi|329746704|gb|AEC00061.1| DNA mismatch repair protein MutL [Selenomonas sputigena ATCC 35185] Length = 640 Score = 501 bits (1291), Expect = e-139, Method: Composition-based stats. Identities = 192/643 (29%), Positives = 310/643 (48%), Gaps = 56/643 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + IN+IAAGE++ERP+ +KEL+ENS+DA ++++E I GG S ++TDNG Sbjct: 3 RIHVLDDNTINKIAAGEVVERPASVVKELVENSIDAGATKIEVEIMAGGTSLMRVTDNGC 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E+ +A++RH TSKI + D ++ T GFRGEALP+I AVS + +R G Sbjct: 63 GMSLEDAKLAIERHATSKIQEVGDLYSLRTLGFRGEALPTIAAVSRFRMRTRKEGEELGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q++I G + + GT ++V DLFF PAR FLK+ E I+D + ++A++ Sbjct: 123 QVSIIGGVTHDIGETGCSLGTTIQVEDLFFNTPARKKFLKTTHTEGGRISDFMTKLALSR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + NG+ + I + G + + L+ + ++ + GY Sbjct: 183 PDIAFRLISNNKTAAM---TPGNGSLFDAIRSIYGSQAADALLALSFEDEDVKITGYITK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ + + +NGR + +K I I AY +P +P+VVL + + R VDVNV Sbjct: 240 PSMLKSSRAWQTFIVNGRIISNKAIAKAIDNAYHSLLPKSGFPMVVLNIAVPQRSVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV-----------------LSKKMI 342 HP KS ++F + I + +++ AI G + V Sbjct: 300 HPQKSEMKFEDEGRIFKAVYKTVVDAIRPVGQTLEDVAASVQNVERRYAMEPMQFVAATQ 359 Query: 343 SSFHQDNA-----------------PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 +S +D A + + A S Q L + S +D +P+D Sbjct: 360 ASEEEDFAGNGSAKTSFGIRYTENPYQASPAQPAMSFAEAQSVLKGEGAAYSAHDGVPAD 419 Query: 386 DPTYSEDNDPVEESEAT--------------HYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 E D + + + ++ Q+ YII++ DGL IVDQ Sbjct: 420 GGLVREARDAAYKPQGSTAEMPLADVSEAGLYHGGITPIGQVDLCYIIAKDKDGLYIVDQ 479 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 HAAHER++++K + +I SQ LL I+ E AL+ E+ E RLG E G Sbjct: 480 HAAHERILYDKF--SAMAERIPSQQLLVHPILSFDAREAALVSENQELFRRLGFDMEACG 537 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRK 551 ++E+PA + ++R+I+ + D T T Q+ LATMAC +I+SG + Sbjct: 538 ERDFRLKEVPADVPVSEAEDMIREILARLYDMHET-TAQEIRHACLATMACRAAIKSGDE 596 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +M +L E+ + C HGRPT +K ++ K+F R Sbjct: 597 LNFRQMQIVLEELSQTARPYTCPHGRPTILKFSSEELAKMFKR 639 >gi|253750975|ref|YP_003024116.1| DNA mismatch repair protein MutL [Streptococcus suis SC84] gi|253752875|ref|YP_003026015.1| DNA mismatch repair protein MutL [Streptococcus suis P1/7] gi|251815264|emb|CAZ50829.1| DNA mismatch repair protein MutL [Streptococcus suis SC84] gi|251819120|emb|CAR44195.1| DNA mismatch repair protein MutL [Streptococcus suis P1/7] gi|319757227|gb|ADV69169.1| DNA mismatch repair protein MutL [Streptococcus suis JS14] Length = 645 Score = 501 bits (1291), Expect = e-139, Method: Composition-based stats. Identities = 178/632 (28%), Positives = 306/632 (48%), Gaps = 44/632 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+ENS+DA +S++E + G QITDNG G Sbjct: 4 IIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDNGEG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI D I T GFRGEALPSI +VSH+ + + + G Sbjct: 64 IAPDEVALALRRHATSKIKNQSDLFRIRTLGFRGEALPSIASVSHMIIETATADSAHGLH 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G I PV+ GT + V DLF+ PARL +++S+Q E + I DV+ R+++A+P Sbjct: 124 LEAKGGVIEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHIVDVVNRLSLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++F ++ + G + IS + G VE+ + + + GY +P Sbjct: 184 EIAFVLVNEGR---ELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEDLDFQISGYVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ +EIDP DVNVH Sbjct: 241 ELTRANRNYISIFINGRYIKNFLLNRAILEGYGSKLMVGRFPLAVISIEIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + I ++I +A+ ++ + ++ + S+ + A + LP Sbjct: 301 PTKQEVRISKEKELMTLIREAISQALKEQDLIPDALENLAQSSTRPKVKAEQGTLPLREP 360 Query: 361 -----------------------------------SLTNTQEKLFLQENRLSTNDLLPSD 385 + N + E + ++ Sbjct: 361 KIYYDTIKQDFFLKPDVVAEDVKPLEEDRQEIVESPVENRPTSVQFAERQSVESEDQEHP 420 Query: 386 DPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 + + E D ++ E + + Q+H Y+ +Q GL I+DQHAA ER+ +E Sbjct: 421 NLSAKELAKLADKLDREETSTFPELEYFGQMHGTYLFAQGKTGLYIIDQHAAQERVKYEY 480 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 R+ ++Q LL P I + + + ++ + L ++G+ E +G N +RE P Sbjct: 481 YREKIGQVDNSAQQLLVPYIFEFPQNDALDLVHKMDALRQVGVNLEEYGSNQFILREHPI 540 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 + ++ I + ++ D ++ + +++ + M+C SI++ + LLR Sbjct: 541 WMKEEEIESGIYEMCDMLLLTDQV-SIKQYRAELAIMMSCKRSIKANHALDDYSARDLLR 599 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ N C HGRP + SD+EK+F R Sbjct: 600 QLSYCQNPYNCPHGRPVLVHFSKSDMEKMFRR 631 >gi|199597366|ref|ZP_03210796.1| DNA mismatch repair protein [Lactobacillus rhamnosus HN001] gi|199591626|gb|EDY99702.1| DNA mismatch repair protein [Lactobacillus rhamnosus HN001] Length = 650 Score = 501 bits (1291), Expect = e-139, Method: Composition-based stats. Identities = 171/641 (26%), Positives = 304/641 (47%), Gaps = 53/641 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS + NQIAAGE+IERP+ +KEL+ENS+DA++++++ ++ G ++DNG Sbjct: 3 KIHQLSATLSNQIAAGEVIERPASVVKELVENSIDAQATQIDVKVSAAGLQTIHVSDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A RH TSKI + D N+H+ GFRGEAL SI AV+ +TL + GA Sbjct: 63 GIDPDDVATAFLRHATSKILTTRDLFNVHSLGFRGEALASIAAVADVTLTTAT-DAGIGA 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G ++ S A GT VEV DLFF PARL ++KS+Q E I D++ R+A+A Sbjct: 122 KIHVKGGQVESQTTAAHRRGTDVEVSDLFFNTPARLKYMKSQQTELGKIVDIVSRLALAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PK++FT S + + + G+ + ++ + G + V+ + + + G T + Sbjct: 182 PKIAFTVSHDGNMMVR---TAGQGDLRQTLAGIYGLPVARSMVDFQAEDLDFKVSGLTSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR +++ + + Y + +GRYP+ V+ +++D VDVNV Sbjct: 239 PETTRASRNYLSLVVNGRYIKNFQLTKAVIAGYGSKLMVGRYPMGVISIQMDAALVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS------------------------ 335 HP K+ +R + + + ++I+ + K+ + + Sbjct: 299 HPTKAEVRLSKEDQLSHLLSEAIRARLAKENLIPDAMDNLPKRERYDLDQLELTLNKISP 358 Query: 336 -VLSKKMISSFHQDNAPKTHLPKYATSLTNTQE-------------KLFLQENRLSTNDL 381 + + ++NA + + E +F + RL+ D Sbjct: 359 KTTAVPNQGAEVRENADTNTVNTPTSQPAAQTEAAVDLTINDLDDRPIFDEPQRLAAWDQ 418 Query: 382 LPSDDPTY--------SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 + +D + AQ+H Y+++++ DGL I+DQHA Sbjct: 419 RYQTLDANVAPALVEDAAASDLKRPEPTERFPDLTYLAQVHGTYLLAESGDGLYILDQHA 478 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 A ER+ +E RQ Q LL P ++D + I H + L +G+ E FG N Sbjct: 479 AQERVNYEFYRQAIGEVSNDQQHLLVPIVLDYSAADAINIRTHRDVLEAVGLYLEDFGQN 538 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQ 553 + + P +++++D ++ ++ E M+C +I++ + Sbjct: 539 SFVVEHHPTWFKAGQEEDTIKEMVDWVLRDGKI-SVAAFREKTAIMMSCKRAIKANHHLD 597 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL+++ + N C HGRP + +D+EK+F R Sbjct: 598 DQQARALLQKLPQCENPFNCPHGRPVLVHFSNTDLEKMFKR 638 >gi|314933476|ref|ZP_07840841.1| DNA mismatch repair protein HexB [Staphylococcus caprae C87] gi|313653626|gb|EFS17383.1| DNA mismatch repair protein HexB [Staphylococcus caprae C87] Length = 655 Score = 501 bits (1291), Expect = e-139, Method: Composition-based stats. Identities = 170/656 (25%), Positives = 315/656 (48%), Gaps = 68/656 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA S+ + + G + ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDANSTEINIEVEQSGIASIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + RH TSK+ DD +I T GFRGEAL SI +VS +TL + N G Sbjct: 63 GIEQDDLSLVFHRHATSKLDVDDDLFHIRTLGFRGEALASISSVSKVTLKTCT-DNENGF 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EVYAENGEIINRKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + + + + +G E ++++ G + V ++ +++ L+G+ Sbjct: 182 PDIRISLVSDGK---TLISTNGSGRTNEVMAEIYGMRVAKDLVHVSGDTSDYHLEGFFAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GRYP+ + +E+DP VDVNV Sbjct: 239 PEHSRSNRHYISIFINGRYIKNFILNKAILEGYHTLLTIGRYPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----KMISSFHQ------- 347 HP K +R + + I++ I++A + + + L + K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLYDLIVEKIREAFKDRILIPQNDLDRTPRKNKVLESFGQQKMDFEK 358 Query: 348 ------------------DNAPKTHLPKYATSLTNTQE-----KLFLQENRLSTNDLLPS 384 D+ T+ + + N Q+ +E +++++ S Sbjct: 359 RNSEVAQNGDPSEHFSSKDHFNNTNDSEIREGINNYQDTNISLSNQDEEQENASHNIQRS 418 Query: 385 DDPTYSEDNDPV--------------------------EESEATHYQLGIACAQIHQNYI 418 + YS+ + ++ Q+H YI Sbjct: 419 GEDNYSQIQKDILNDMEDDDLSNSESTSNNEGDIKGTVSQNPKRRVPYMEVVGQVHGTYI 478 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 I+Q +G+ ++DQHAA ER+ +E R Q LL P + E +I ++ + Sbjct: 479 IAQNENGMFMIDQHAAQERIKYEYFRDKIGEVSNEVQNLLIPLTFHFSKDEQMIIDQYQD 538 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +L ++G+ E FG + + P K ++++D+I+ ++D+ ++ E+ Sbjct: 539 ELDKVGVHLEHFGGHDYIVNSYPVWFPKAEAQEIIKDMIELVLDNKKVD-VKKIREDAAI 597 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C SI++ +++ EM+ L+ ++ + + C HGRP I ++EKLF R Sbjct: 598 MMSCKKSIKANHYLKNNEMSDLIDQLREAEDPFTCPHGRPIIINFSNYELEKLFKR 653 >gi|194468324|ref|ZP_03074310.1| DNA mismatch repair protein MutL [Lactobacillus reuteri 100-23] gi|194453177|gb|EDX42075.1| DNA mismatch repair protein MutL [Lactobacillus reuteri 100-23] Length = 668 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 181/653 (27%), Positives = 303/653 (46%), Gaps = 64/653 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + NQIAAGE+IERP+ +KEL+ENSLDA S RV+ ++ G ++ D+G Sbjct: 3 KIHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+I +A RH TSKI+ D + T GFRGEALPSI +V+ +TL + G Sbjct: 63 GIAAEDISLAFHRHATSKINSRHDLFKVQTMGFRGEALPSIASVADVTLTTAQAGQEEGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + G K V+P GT ++V DLFF PARL +LKS Q E ITD+I R+A+A Sbjct: 123 MIHLRGGKELVVKPAGARQGTDIKVTDLFFNTPARLKYLKSPQTELTRITDIINRLALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F+F+ ++ + N N + ++ + G +E++ ++ + G+ + Sbjct: 183 PAVAFSFTHNGR---ELFRSAGNNNLQQVVAAIYGVQAGRKMLEISGADDDFKVSGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + + IN R +++ + I Y + +GRYP+ V+ +++DP VDVNV Sbjct: 240 PELTRASRQYITITINHRYIRNFELTKAIIQGYESKLMVGRYPIAVINIDLDPVLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST------------------------SS 335 HPAK +R + I ++I+K I + + S Sbjct: 300 HPAKREVRLSKEQQLIKLIAETIRKRIAVENLIPDVDADQFIPNDDEVADLDRRLKEASP 359 Query: 336 VLSKKMISSFHQDNA-------PKTHLPKYATSLTNTQEKLFL-------QENRLSTNDL 381 V IS+ P+ P +A +L + + + D Sbjct: 360 VYHAAPISAVPATEKKATEISTPEADNPAHADALDSEIPAPIVIHHLEDLNTPAMQKFDE 419 Query: 382 LPSDDPTYSEDNDPV--------------------EESEATHYQLGIACAQIHQNYIISQ 421 ++ + + P+ ++ + + Q+ ++++Q Sbjct: 420 RYQNEGEVTPFSAPIPTMTKKPVKPANIELDVHDKQDQQQNRFPDLQYIGQLQGTFLLAQ 479 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 DGL IVDQHAA ER+ +E RQ Q L P +++ + I +H + L Sbjct: 480 AGDGLYIVDQHAAQERINYEYYRQKIGEVSADQQNFLVPLVLNYSTVDAMTINQHLDTLA 539 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 +G++ E FG N+ +R P + +++ID +I + T+++ M+ Sbjct: 540 AVGLELESFGQNSFILRSHPTWFKEGQEEDTAKEMIDWLIKNGK-LTVKEFRMKTAIMMS 598 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C +I++ + E LL+ + + N C HGRP + D+EK+F R Sbjct: 599 CKRAIKANHHLDEREAKALLKRLPQCENPFNCPHGRPVTVHFNDQDLEKMFKR 651 >gi|258540413|ref|YP_003174912.1| DNA mismatch repair protein [Lactobacillus rhamnosus Lc 705] gi|257152089|emb|CAR91061.1| DNA mismatch repair protein mutL [Lactobacillus rhamnosus Lc 705] Length = 650 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 171/641 (26%), Positives = 306/641 (47%), Gaps = 53/641 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS + NQIAAGE+IERP+ +KEL+ENS+DA++++++ ++ G ++DNG Sbjct: 3 KIHQLSATLSNQIAAGEVIERPASVVKELVENSIDAQATQIDVKVSAAGLQTIHVSDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A RH TSKI + D N+H+ GFRGEAL SI AV+ +TL + GA Sbjct: 63 GIDPDDVATAFLRHATSKILTTRDLFNVHSLGFRGEALASIAAVADVTLTTAT-DAGIGA 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G ++ S A GT VEV DLFF PARL ++KS+Q E I D++ R+A+A Sbjct: 122 KIHVKGGQVESQTTAAHRRGTDVEVSDLFFNTPARLKYMKSQQTELGKIVDIVSRLALAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PK++FT S + + + G+ + ++ + G + V+ + + + G T + Sbjct: 182 PKIAFTVSHDGNMMVR---TAGQGDLRQTLAGIYGLPVARSMVDFQAEDLDFKVSGLTSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR +++ + + Y + +GRYP+ V+ +++D VDVNV Sbjct: 239 PETTRMSRNYLSLVVNGRYIKNFQLTKAVIAGYGSKLMVGRYPMGVISIQMDAALVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF-------------- 345 HP K+ +R + + + ++I+ + K+ + ++ + + Sbjct: 299 HPTKAEVRLSKEDQLSHLLSEAIRARLAKENLIPDAMDNLPKRERYDLDQLELTLNKISP 358 Query: 346 ------------------HQDNAPKTHLPKYATSLTN------TQEKLFLQENRLSTNDL 381 + +N P + A + + +F + RL+ D Sbjct: 359 KTTAVSHQGTEVRENADTNTENTPTSQPAAQAEAAVDLTINDLDDRPIFDEPQRLAAWDQ 418 Query: 382 LPSDDPTY--------SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 + +D + AQ+H Y+++++ DGL I+DQHA Sbjct: 419 RYQTLDANVAPALVEDTAASDLKRSEPTERFPDLTYLAQVHGTYLLAESGDGLYILDQHA 478 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 A ER+ +E RQ Q LL P ++D + I H + L +G+ E FG N Sbjct: 479 AQERVNYEFYRQAIGEVSNDQQHLLVPIVLDYSAADAINIRTHRDVLEAVGLYLEDFGQN 538 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQ 553 + + P +++++D ++ ++ E M+C +I++ + Sbjct: 539 SFVVEHHPTWFKAGQEEDTIKEMVDWVLRDGKI-SVAAFREKTAIMMSCKRAIKANHHLD 597 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL+++ + N C HGRP + +D+EK+F R Sbjct: 598 DQQARALLQKLPQCENPFNCPHGRPVLVHFSNTDLEKMFKR 638 >gi|146317719|ref|YP_001197431.1| DNA mismatch repair protein [Streptococcus suis 05ZYH33] gi|146319909|ref|YP_001199620.1| DNA mismatch repair protein [Streptococcus suis 98HAH33] gi|145688525|gb|ABP89031.1| DNA mismatch repair enzyme (predicted ATPase) [Streptococcus suis 05ZYH33] gi|145690715|gb|ABP91220.1| DNA mismatch repair enzyme (predicted ATPase) [Streptococcus suis 98HAH33] gi|292557519|gb|ADE30520.1| putative mismatch repair protein HexB [Streptococcus suis GZ1] Length = 646 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 178/632 (28%), Positives = 306/632 (48%), Gaps = 44/632 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+ENS+DA +S++E + G QITDNG G Sbjct: 5 IIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDNGEG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI D I T GFRGEALPSI +VSH+ + + + G Sbjct: 65 IAPDEVALALRRHATSKIKNQSDLFRIRTLGFRGEALPSIASVSHMIIETATADSAHGLH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G I PV+ GT + V DLF+ PARL +++S+Q E + I DV+ R+++A+P Sbjct: 125 LEAKGGVIEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHIVDVVNRLSLAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++F ++ + G + IS + G VE+ + + + GY +P Sbjct: 185 EIAFVLVNEGR---ELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEDLDFQISGYVSLP 241 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ +EIDP DVNVH Sbjct: 242 ELTRANRNYISIFINGRYIKNFLLNRAILEGYGSKLMVGRFPLAVISIEIDPYLADVNVH 301 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + I ++I +A+ ++ + ++ + S+ + A + LP Sbjct: 302 PTKQEVRISKEKELMTLIREAISQALKEQDLIPDALENLAQSSTRPKVKAEQGTLPLREP 361 Query: 361 -----------------------------------SLTNTQEKLFLQENRLSTNDLLPSD 385 + N + E + ++ Sbjct: 362 KIYYDTIKQDFFLKPDVVAEDVKPLEEDRQEIVESPVENRPTSVQFAERQSVESEDQEHP 421 Query: 386 DPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 + + E D ++ E + + Q+H Y+ +Q GL I+DQHAA ER+ +E Sbjct: 422 NLSAKELAKLADKLDREETSTFPELEYFGQMHGTYLFAQGKTGLYIIDQHAAQERVKYEY 481 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 R+ ++Q LL P I + + + ++ + L ++G+ E +G N +RE P Sbjct: 482 YREKIGQVDNSAQQLLVPYIFEFPQNDALDLVHKMDALRQVGVNLEEYGSNQFILREHPI 541 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 + ++ I + ++ D ++ + +++ + M+C SI++ + LLR Sbjct: 542 WMKEEEIESGIYEMCDMLLLTDQV-SIKQYRAELAIMMSCKRSIKANHALDDYSARDLLR 600 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ N C HGRP + SD+EK+F R Sbjct: 601 QLSYCQNPYNCPHGRPVLVHFSKSDMEKMFRR 632 >gi|242373589|ref|ZP_04819163.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis M23864:W1] gi|242348952|gb|EES40554.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis M23864:W1] Length = 656 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 168/657 (25%), Positives = 308/657 (46%), Gaps = 69/657 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DAES+ + + G + ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAESTEINVEVEQSGVASIRVVDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + RH TSKI DD +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEQDDLGLVFHRHATSKIDADDDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNENGF 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EVYAENGEIINSKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + + + + +G E ++++ G + V ++ +++ L+G+ Sbjct: 182 PDIRISLVSDGK---TLISTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSDYHLEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GRYP+ + +++DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFLLNKAIIEGYHTLLTIGRYPICYINIQMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----KMISSFHQ------- 347 HP K +R + I++ I++A + + + + K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLFALIVEKIREAFKDRILIPQNDFDRSPKKNKVLESFEQQKMDFEK 358 Query: 348 --------------------------------DNAPKTHLPKYATSLTNTQEKLFLQENR 375 D+ K + N+ R Sbjct: 359 RNNSSASNQSASSYQSSENGYRSDSDNSVVNEDSGQKYEYDNSTIDVENSNSDSSHYIQR 418 Query: 376 LSTNDLLPSDDPTYSEDNDP------------------VEESEATHYQLGIACAQIHQNY 417 S ++ + +E + + +S Q+H Y Sbjct: 419 TSEDNYFQNQKDILNEIENDQYNELDSSFAKEDDIKGTISKSPHRRVPYMEVVGQVHGTY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 II+Q +G+ ++DQHAA ER+ +E R+ Q LL P + E +I ++ Sbjct: 479 IIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFSKDEQMIIDQYQ 538 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 ++L R+G+ E FG + + P K + ++++D+I+ +++ ++ E + Sbjct: 539 DELDRVGVHLEHFGGHDYIVNSYPVWFPKGDAEEIIKDMINLVLEHKKVD-VKKIREEVA 597 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C SI++ +++ EM+ L+ ++ + + C HGRP I ++EKLF R Sbjct: 598 IMMSCKKSIKANHYLKNNEMSDLIDQLREAEDPFTCPHGRPIIINFSNYELEKLFKR 654 >gi|229552975|ref|ZP_04441700.1| DNA mismatch repair protein MutL [Lactobacillus rhamnosus LMS2-1] gi|229313664|gb|EEN79637.1| DNA mismatch repair protein MutL [Lactobacillus rhamnosus LMS2-1] Length = 650 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 171/641 (26%), Positives = 307/641 (47%), Gaps = 53/641 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS + NQIAAGE+IERP+ +KEL+ENS+DA++++++ ++ G ++DNG Sbjct: 3 KIHQLSATLSNQIAAGEVIERPASVVKELVENSIDAQATQIDVKVSAAGLQTIHVSDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A RH TSKI + D N+H+ GFRGEAL SI AV+ +TL + GA Sbjct: 63 GIDPDDVATAFLRHATSKILTTRDLFNVHSLGFRGEALASIAAVADVTLTTAT-DAGIGA 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G ++ S A GT VEV DLFF PARL ++KS+Q E I D++ R+A+A Sbjct: 122 KIHVKGGQVESQTTAAHRRGTDVEVSDLFFNTPARLKYMKSQQTELGKIVDIVSRLALAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PK++FT S + + + G+ + ++ + G + V+ + + + G T + Sbjct: 182 PKIAFTVSHDGNMMVR---TAGQGDLRQTLAGIYGLPVARSMVDFQAEDLDFKVSGLTSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR +++ + + Y + +GRYP+ V+ +++D VDVNV Sbjct: 239 PETTRASRNYLSLVVNGRYIKNFQLTKAVIAGYGSKLMVGRYPMGVISIQMDAALVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF-------------- 345 HP K+ +R + + + ++I+ + K+ + ++ + + Sbjct: 299 HPTKAEVRLSKEDQLSHLLSEAIRARLAKENLIPDAMDNLPKRERYDLDQLELTLNKISP 358 Query: 346 ------------------HQDNAPKTHLPKYATSLTN------TQEKLFLQENRLSTNDL 381 + +N P + A + + +F + RL+ D Sbjct: 359 KTTAVSHQGTEVRENADTNTENTPTSQPAAQAEAAVDLTINDLDDRPIFDEPQRLAAWDQ 418 Query: 382 LPSDDPTY--------SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 + +D + AQ+H Y+++++ DGL I+DQHA Sbjct: 419 RYQTLDANVAPALVEDTAASDLKRSEPTERFPDLTYLAQVHGTYLLAESGDGLYILDQHA 478 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 A ER+ +E RQ Q LL P ++D + I H + L +G+ E FG N Sbjct: 479 AQERVNYEFYRQAIGEVSNDQQHLLVPIVLDYSAADAINIRTHRDVLEAVGLYLEDFGQN 538 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQ 553 + ++ P +++++D ++ ++ E M+C +I++ + Sbjct: 539 SFVVKHHPTWFKAGQEEDTIKEMVDWVLRDGKI-SVAAFREKTAIMMSCKRAIKANHHLD 597 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL+++ + N C HGRP + +D+EK+F R Sbjct: 598 DQQARALLQKLPQCENPFNCPHGRPVLVHFSNTDLEKMFKR 638 >gi|225869420|ref|YP_002745368.1| DNA mismatch repair protein MutL [Streptococcus equi subsp. zooepidemicus] gi|259511151|sp|C0MGC4|MUTL_STRS7 RecName: Full=DNA mismatch repair protein mutL gi|225702696|emb|CAX00809.1| DNA mismatch repair protein MutL [Streptococcus equi subsp. zooepidemicus] Length = 660 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 176/648 (27%), Positives = 311/648 (47%), Gaps = 59/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +L E + NQIAAGE+IERP+ +KEL+EN++DA+SS++ I G QITDNG Sbjct: 3 TIIELPEVLANQIAAGEVIERPASVVKELVENAIDAKSSQITVEIEESGLKMIQITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S LT+ + + G+ Sbjct: 63 GMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKLTIKTATAEAEHGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG KI + V+ GT ++V +LF+ PARL ++KS Q E + DV+ R+++A+ Sbjct: 123 ILVASGGKIEQLEAVSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHVVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT + ++ S G+ + ++ + G + ++++ + + G+ + Sbjct: 183 PEIAFTLISDGK---QLTQTSGTGDLRQALAGIYGLNTAKKMIDISSADLDFEVGGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K IR + I +I +++ ++ + ++ + S+ +T LP Sbjct: 300 HPTKQEIRISKERELMALISTAISESLREQDLIPDALENLARSSTRSFSKPEQTSLPLQP 359 Query: 360 TSL--TNTQEKLFLQENRLSTNDLL----------------------------------- 382 + L + F +E +S + Sbjct: 360 SQLYYDPQKNDFFTKETVVSEDSPQGFNHEVLIDSDVKQVDNLQVTKTESEAAAPSVKYA 419 Query: 383 ----------------PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGL 426 + S+ D +E E + + Q+H Y+ +Q DGL Sbjct: 420 SRPDPMLSDGEHPGLDVHNKQKLSQMLDRLENEEQSVFPELDYFGQMHGTYLFAQGRDGL 479 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 I+DQHAA ER+ +E R + Q LL P + + + + E L+ +GI Sbjct: 480 FIIDQHAAQERVKYEYYRDKIGEVDNSLQQLLVPYLFEFSGSDFINLQEKMSLLNEVGIY 539 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E +G + +RE P + + I + ++ D ++ ++ +++ + M+C SI Sbjct: 540 LEPYGNHTFILREHPIWMKETEIESGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKHSI 598 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + +LL ++ + N C HGRP I +D+EK+F R Sbjct: 599 KANHSLDDYSARQLLLQLAQCKNPYNCPHGRPVLINFSKADMEKMFRR 646 >gi|332522949|ref|ZP_08399201.1| DNA mismatch repair protein, C-terminal domain protein [Streptococcus porcinus str. Jelinkova 176] gi|332314213|gb|EGJ27198.1| DNA mismatch repair protein, C-terminal domain protein [Streptococcus porcinus str. Jelinkova 176] Length = 655 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 181/643 (28%), Positives = 310/643 (48%), Gaps = 54/643 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERP+ +KEL+EN++DA+SS++ I G ITDNG Sbjct: 3 KIIELPEILANQIAAGEVIERPASVVKELVENAIDAKSSQITIDIEESGLKSITITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ +++PM++ RH TSKI + D I T GFRGEALPSI ++S +T+ S ++ G+ Sbjct: 63 GMSEQDLPMSILRHATSKIRNQGDLFRIRTLGFRGEALPSIASISEMTIASATEESEHGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G KI ++M G+ + V +LF+ PARL ++KS Q E I DVI R+++ + Sbjct: 123 QLFVRGGKIEGQETISMPVGSRIRVENLFYNTPARLKYMKSLQSELAHIVDVINRLSLGH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT + + S +G + I+ + G +E+ + + GY + Sbjct: 183 PEIAFTLISDGREMTR---TSGSGQLKQAIAGIYGLKTAKKMIEIANADLDFDISGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+PVVV+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPVVVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I +I +++ + + ++ + S+ +T LP Sbjct: 300 HPTKQEVRISKERELMALISTAIAESLKAQDLIPDALENLAKSSTRSLPKTEQTRLPLQT 359 Query: 357 ---------------------------------------------KYATSLTNTQEKLFL 371 + ++ + + Sbjct: 360 RKLYYDPHENDFFVEKNEVNEVQTKLYSGSTDLDNAVKLTEEEPIELSSPAVKYASRPEI 419 Query: 372 QENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 +E +DL + + + +E EA+ + Q+H Y+ +Q DGL I+DQ Sbjct: 420 EEITGDHSDLTFKNKHKLEQVMERLENEEASIFPELDYFGQMHGTYLFAQGVDGLFIIDQ 479 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 HAA ER+ +E R+ + Q LL P + + + + E L+ +GI E +G Sbjct: 480 HAAQERVKYEYYREKIGQVDSSLQQLLVPYLFEFSGSDFLTLQEKMSLLNDVGIYLEPYG 539 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRK 551 N +RE P + + I + ++ D ++ + ++++ + M+C SI++ Sbjct: 540 QNTFILREHPIWMKESEIEVGIYEMCDMLLLTQEV-SIKNYRAELAIMMSCKKSIKANHT 598 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +LL ++ + N C HGRP I SD+EK+F R Sbjct: 599 LDDYSARQLLLQLAQCKNPYNCPHGRPVLIHFSKSDMEKMFRR 641 >gi|148259642|ref|YP_001233769.1| DNA mismatch repair protein MutL [Acidiphilium cryptum JF-5] gi|166231100|sp|A5FW68|MUTL_ACICJ RecName: Full=DNA mismatch repair protein mutL gi|146401323|gb|ABQ29850.1| DNA mismatch repair protein MutL [Acidiphilium cryptum JF-5] Length = 582 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 219/596 (36%), Positives = 334/596 (56%), Gaps = 18/596 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L IN+IAAGE+IERP+ A+KEL+EN+LDA + R+ I GGG ++TD+G Sbjct: 1 MPIRRLDPTTINRIAAGEVIERPAAAVKELVENALDAGARRIGVTIEGGGIGRIEVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+P+A++RH TSK++D+ I T GFRGEALPSIGA LT+ SRP ++ A Sbjct: 61 HGIPEAELPLAIERHATSKLTDEALVRIATLGFRGEALPSIGAAGRLTVTSRPAGQDSAA 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G + V PVA GT V V DLF PAR FL+S E D +R +A+A Sbjct: 121 RIVVDGGAVREVEPVAGPVGTCVTVEDLFHATPARRKFLRSAGSEAGSCADAVRHLALAA 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F+ + + + + + ER++ + G +E+ E+ L+G+ Sbjct: 181 PAVGFSLTIDGAASFDLPP----QDRRERVAAIYGRADAEKLLEIEAVREEVALRGFISP 236 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + R A ++ +NGR V+D + +R AY E IP GR+P+ L LEI +DVNV Sbjct: 237 ASLTRAAARHQHMVVNGRPVRDPLLRMALRLAYRERIPAGRHPLAALWLEIPAEMLDVNV 296 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ +RF P +R+ +I ++Q+A+ + + + +S A + +P+Y Sbjct: 297 HPAKAELRFATPDAVRSLMIGAVQRALAT----PADLAAAPSVSMPRTSWAASSPMPRYP 352 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + + E L D + V Y LG AQ+ YI+ Sbjct: 353 QAESRAARGFAEAE--------LRGLDLPPARVAPEVLPESRPDYPLGTPIAQVFDTYIL 404 Query: 420 SQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +Q+ DG LV+VDQHAAHERL ++R + +S I +Q LL P +++L + A ++ E Sbjct: 405 AQSGDGTLVLVDQHAAHERLTEIRLRAERDSGAIPAQALLAPSVVELPAEDIARLLGAAE 464 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L LG++ E FGP A+ +R +PA L+K + L RD+ D + +S T L+ +++ +L Sbjct: 465 RLAGLGLEIEAFGPGAVLVRAVPAALAKADPAALARDVADTLAESGTAMALEAKLDAVLI 524 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MAC+ S+R+GR++ EM LLR ME P + C HGRPT ++L D+E++FGR Sbjct: 525 RMACHRSVRAGRRLAFAEMEALLRAMETTPLAQTCPHGRPTVLRLSRGDLERMFGR 580 >gi|290581354|ref|YP_003485746.1| putative mismatch repair protein [Streptococcus mutans NN2025] gi|254998253|dbj|BAH88854.1| putative mismatch repair protein [Streptococcus mutans NN2025] Length = 651 Score = 501 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 183/639 (28%), Positives = 303/639 (47%), Gaps = 50/639 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERP+ +KEL+EN++DA+SS++ I G Q+TDNG Sbjct: 3 KIIELPEVLANQIAAGEVIERPASVVKELVENAIDADSSQITIEIEESGLKKIQVTDNGQ 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ M+++RH TSKI D I T GFRGEALPSI ++S LTL + G Sbjct: 63 GIEQADVIMSLRRHATSKIKKQSDLFRIRTLGFRGEALPSIASISRLTLKTATKGEIHGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + +G KI ++ GT V V +LFF PARL ++KS Q E I DVI R+++A+ Sbjct: 123 LLIANGGKIEKEEAISTPIGTKVSVENLFFNTPARLKYMKSLQAELAHIIDVINRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT ++ + G+ + ++ + G VE++ + + GY + Sbjct: 183 PEIAFTLINDSR---ELTKTAGKGDLRQALAGIYGVTTAKKMVEISNADLDFEVSGYISL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + N I +I ++ ++ + ++ + S+ + +T LP Sbjct: 300 HPTKQEVRISKEKELMNLISSAIADSLREQELIPDALENLAKTSTNKKQKFEQTQLPLKQ 359 Query: 360 TSL--TNTQEKLFLQENRLSTNDLLP---------------------------------- 383 ++L TQ FL+E +S Sbjct: 360 SNLYYDKTQNDFFLKEMTVSEASSEFTVVDKAVNITDNVSGHSSVKYAQRQMRTCENKEH 419 Query: 384 --------SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 S + +E E + + Q+H Y+ +Q GL I+DQHAA Sbjct: 420 PSLAMTDKQQKRQLSRIVESLENEEKSTFPELEYFGQMHGTYLFAQGEGGLYIIDQHAAQ 479 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 ER+ +E R + Q LL P + + + + E L+ +GI E +G N Sbjct: 480 ERVKYEYYRDKIGEVDNSLQQLLVPYLFEFPANDFMTLQEKMSILNEVGIHLENYGENTF 539 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 +RE P L +K I + ++ D ++ ++ +++ + M+C SI++ + Sbjct: 540 ILREHPIWLQEKEIESAVYEMCDMLLLTNEV-SIKKYRAELAIMMSCKRSIKANHTLDDY 598 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ + N C HGRP + +D+EK+F R Sbjct: 599 SARNLLIQLSQCKNPYNCPHGRPVLVNFTKADMEKMFRR 637 >gi|315221511|ref|ZP_07863431.1| DNA mismatch repair protein [Streptococcus anginosus F0211] gi|315189345|gb|EFU23040.1| DNA mismatch repair protein [Streptococcus anginosus F0211] Length = 688 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 179/636 (28%), Positives = 300/636 (47%), Gaps = 47/636 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KELIENS+DA ++++ I G Q+ DNG Sbjct: 43 KIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLRSIQVIDNGE 102 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+ +A++RH TSKI D I T GFRGEALPSI +VS LT+ + G Sbjct: 103 GIEHEEVSLALRRHATSKIKKQADLFRIRTLGFRGEALPSIASVSRLTIETATSSGAHGT 162 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G ++ ++ P + GT ++V DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 163 LLIAQGGEVETLEPSSCPRGTKIKVEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 222 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + GN + I+ + G +E+ + + GY + Sbjct: 223 PEVAFTLVNDGKEMTR---TAGTGNLRQAIAGIYGLTTAKKMIEILASDLDFEVSGYISL 279 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ + IDP DVNV Sbjct: 280 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIRIDPYLADVNV 339 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I ++ ++ + ++ + + + +T LP Sbjct: 340 HPTKQEVRISKERELMVLISQAISASLKEQDLIPDALENLAKSTINRANKPEQTSLPLKE 399 Query: 357 ----------------KYATSLTNTQEKLFLQENRLSTN--------------------- 379 + + + + +E L + T+ Sbjct: 400 NRLYYDKERNDFFVKPQVSEAQPSFEESARLDQQSADTDELNSKAASVKFAERQSPSYNQ 459 Query: 380 -DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 D D + D + E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 460 LDHPELDQASLERALDKLNGEETSTFPELEYFGQMHGTYLFAQGNGGLYIIDQHAAQERV 519 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E R+ + Q LL P I + + + + L +G+ E +G N +R Sbjct: 520 KYEYYREKIGDVDASQQQLLVPYIFEFPADDMLRLKQRMTLLEEVGVFLEEYGTNQFILR 579 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P L ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 580 EHPIWLKEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSAR 638 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L+ ++ + N C HGRP + SD+ K+F R Sbjct: 639 DLIFQLSQCDNPYNCPHGRPVLVNFTKSDMGKMFRR 674 >gi|326403389|ref|YP_004283470.1| DNA mismatch repair protein MutL [Acidiphilium multivorum AIU301] gi|325050250|dbj|BAJ80588.1| DNA mismatch repair protein MutL [Acidiphilium multivorum AIU301] Length = 582 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 219/596 (36%), Positives = 334/596 (56%), Gaps = 18/596 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L IN+IAAGE+IERP+ A+KEL+EN+LDA + R+ I GGG ++TD+G Sbjct: 1 MPIRRLDPTTINRIAAGEVIERPAAAVKELVENALDAGARRIGVTIEGGGIGRIEVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+P+A++RH TSK++D+ I T GFRGEALPSIGA LT+ SRP ++ A Sbjct: 61 HGIPEAELPLAIERHATSKLTDEALVRIATLGFRGEALPSIGAAGRLTVTSRPAGQDSAA 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G + V PVA GT V V DLF PAR FL+S E D +R +A+A Sbjct: 121 RIVVDGGAVREVEPVAGPVGTCVTVEDLFHATPARRKFLRSAGAEAGSCADAVRHLALAA 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F+ + + + + + ER++ + G +E+ E+ L+G+ Sbjct: 181 PAVGFSLTIDGAASFDLPP----QDRRERVAAIYGRADAEKLLEIEAVREEVALRGFISP 236 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + R A ++ +NGR V+D + +R AY E IP GR+P+ L LEI +DVNV Sbjct: 237 ASLTRAAARHQHMVVNGRPVRDPLLRMALRLAYRERIPAGRHPLAALWLEIPAEMLDVNV 296 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ +RF P +R+ +I ++Q+A+ + + + +S A + +P+Y Sbjct: 297 HPAKAELRFAAPDAVRSLMIGAVQRALAT----PADLAAAPSVSMPRTSWAASSPMPRYP 352 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + + E L D + V Y LG AQ+ YI+ Sbjct: 353 QAESRAARGFAEAE--------LRGLDLPPARVAPEVLPESRPDYPLGTPIAQVFDTYIL 404 Query: 420 SQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +Q+ DG LV+VDQHAAHERL ++R + +S I +Q LL P +++L + A ++ E Sbjct: 405 AQSGDGTLVLVDQHAAHERLTEIRLRAERDSGAIPAQALLAPSVVELPAEDIARLLGAAE 464 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L LG++ E FGP A+ +R +PA L+K + L RD+ D + +S T L+ +++ +L Sbjct: 465 RLAGLGLEIEAFGPGAVLVRAVPAALAKADPAALARDVADTLAESGTATALEAKLDAVLI 524 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MAC+ S+R+GR++ EM LLR ME P + C HGRPT ++L D+E++FGR Sbjct: 525 RMACHRSVRAGRRLAFAEMEALLRAMETTPLAQTCPHGRPTVLRLSRGDLERMFGR 580 >gi|253754700|ref|YP_003027840.1| DNA mismatch repair protein MutL [Streptococcus suis BM407] gi|251817164|emb|CAZ54885.1| DNA mismatch repair protein MutL [Streptococcus suis BM407] Length = 645 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 178/632 (28%), Positives = 307/632 (48%), Gaps = 44/632 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+ENS+DA +S++E + G QITDNG G Sbjct: 4 IIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDNGEG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI D I T GFRGEALPSI +VSH+ + + + G Sbjct: 64 IAPDEVALALRRHATSKIKNQSDLFRIRTLGFRGEALPSIASVSHMIIETATADSAHGLH 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G I PV+ GT + V DLF+ PARL +++S+Q E + I DV+ R+++A+P Sbjct: 124 LEAKGGVIEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHIVDVVNRLSLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++F ++ + G + IS + G VE+ + + + GY +P Sbjct: 184 EIAFVLVNEGR---ELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEDLDFQISGYVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ +EIDP DVNVH Sbjct: 241 ELTRANRNYISIFINGRYIKNFLLNRAILEGYGSKLMVGRFPLAVISIEIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + I ++I +A+ ++ + ++ + S+ + A + LP Sbjct: 301 PTKQEVRISKEKELMTLIREAISQALKEQDLIPDALENLAQSSTRPKVKAEQGTLPLREP 360 Query: 361 -----------------------------------SLTNTQEKLFLQENRLSTNDLLPSD 385 + N + E + ++ Sbjct: 361 KIYYDTIKQDFFLKPDVVAEDVKPLEEDRQEIVESPVENRPTSVQFAERQSVESEDQEHP 420 Query: 386 DPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 + + E D ++ E + + Q+H Y+ +Q GL I+DQHAA ER+ +E Sbjct: 421 NLSAKELAKLADKLDREETSTFPELEYFGQMHGTYLFAQGKTGLYIIDQHAAQERVKYEY 480 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 R+ ++Q LL P I + + + ++ + L ++G+ E +G N +RE P Sbjct: 481 YREKIGQVDNSAQQLLVPYIFEFPQNDALDLVHKMDALRQVGVNLEEYGSNQFILREHPI 540 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 + ++ I + ++ D ++ + +++ ++ M+C SI++ + LLR Sbjct: 541 WMKEEEIESGIYEMCDMLLLTDQV-SIKQYRAELVIMMSCKRSIKANHALDDYSARDLLR 599 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ N C HGRP + SD+EK+F R Sbjct: 600 QLSYCQNPYNCPHGRPVLVHFSKSDMEKMFRR 631 >gi|259502856|ref|ZP_05745758.1| DNA mismatch repair protein HexB [Lactobacillus antri DSM 16041] gi|259169223|gb|EEW53718.1| DNA mismatch repair protein HexB [Lactobacillus antri DSM 16041] Length = 675 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 180/660 (27%), Positives = 305/660 (46%), Gaps = 71/660 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L++ + +QIAAGE+IERP+ +KEL+ENSLDA+S RV+ ++ G ++ D+G Sbjct: 3 QIHELNDILADQIAAGEVIERPASIVKELVENSLDAQSQRVDIIVENAGLDSIRVIDDGQ 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ +A +RH TSKIS D + T GFRGEALPSI +V+ + L + G Sbjct: 63 GIAADDVELAFKRHATSKISSRHDLFRVQTMGFRGEALPSIASVADVELTTAVAGATAGR 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G ++ + +P GT V V +LFF PARL +LKS E ITD+I R+A+A Sbjct: 123 LVHLRGGELVANQPAPARRGTDVRVTELFFNTPARLKYLKSPHTELARITDIINRLALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F+F+ ++ + NGN + I+ + G + + N+ + G+ + Sbjct: 183 PQVAFSFTHNGK---ELFRSAGNGNLQQVIATIYGIQAGRKMLAIQGTDNDFAVTGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + + IN R V++ + I Y + +GRYPV VL +E+DP VDVNV Sbjct: 240 PELTRASRQYITIMINHRYVRNYALTKAIIQGYESKLMVGRYPVAVLNIELDPVLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---------------SVLSKKMISS 344 HPAK +R + I Q+I++ I ++ + + L++++ + Sbjct: 300 HPAKREVRLSKEDQLAKLIAQTIRQRIARENLIPDVDADRFSPQPDPDLVNDLNRRLTEA 359 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTN------------------------- 379 + P+ +S + + Sbjct: 360 AVPYGVHQAGTPESPSSTAKAASPQPTSTAKAGADTVDSQIPAPVIIHQSSQLNSARMKE 419 Query: 380 ------------------DLLPSDDPTYSEDNDPVE-------ESEATHYQLGIACAQIH 414 L +D T + +E + Q+ Sbjct: 420 FDTRYQDEKLPTGISDQGALQTADQQTPPAKAENLELDVHDKSNQATGRFPDLQYIGQLQ 479 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 ++++Q +DGL IVDQHAA ER+ +E+ RQ+ QT L P +++ + I Sbjct: 480 GTFLLAQASDGLYIVDQHAAQERINYERYRQEIGQVSADQQTFLVPLVLNYSTVDALTIT 539 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 H + L +G++ E FG N+ +R P + +R++ID +I T+Q Sbjct: 540 NHADVLASVGLRLEHFGQNSFLLRSHPTWFKEGQEEDTVREMIDWLIKDGK-LTVQQFRM 598 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C +I++ R + E LL+ + + N C HGRP + D+EK+F R Sbjct: 599 KTAIMMSCKRAIKANRHLDDREARALLKRLPQCENPFNCPHGRPVTVHFNDRDLEKMFKR 658 >gi|121533676|ref|ZP_01665503.1| DNA mismatch repair protein MutL [Thermosinus carboxydivorans Nor1] gi|121307667|gb|EAX48582.1| DNA mismatch repair protein MutL [Thermosinus carboxydivorans Nor1] Length = 602 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 172/605 (28%), Positives = 311/605 (51%), Gaps = 19/605 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L E N+IAAGE++ERP+ +KEL+ENS+DA+S +E I GG ++ +++D+G Sbjct: 4 TIRVLDETTANKIAAGEVVERPASVVKELVENSIDAQSRSIEVEIVDGGINYIRVSDDGI 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM++ + +A+ RH TSKI DD NI++ GFRGEALPSI AVS TL +R G Sbjct: 64 GMSAADARLAILRHATSKIRTADDLYNINSLGFRGEALPSIAAVSRFTLTTRLHAEPIGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I I G ++ +R + GT V V DLFF PAR FLK+ E+ I D++ ++A+A Sbjct: 124 YIEIQGGLVTDIREAGGSVGTTVTVSDLFFNTPARRKFLKTPATESAYIHDILGKIALAR 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ K ++ + G + + + G + L+ +I + GY G Sbjct: 184 PDVAIKLINNKR---QVLATTGTGRLFDAAASLYGYKAATELLPLDYTDGDIHITGYVGK 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + + +NGRT+ ++ + + AY +P +P+ ++ + I +VDVNV Sbjct: 241 PHLLKSSRQWQTWTVNGRTISNRMLSKALDNAYHSLLPKNGFPLAIIQIVIPSDKVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK----KGISTSSVLSKKMISSFHQDNAPKTH- 354 HP K+ ++F + + + +++ A+ + I+ + L ++ Sbjct: 301 HPQKNEVKFSDEQAVFRAVYKAVLSALETAKGPQQIAATVSLPASSPGKIAEEFKRTPEN 360 Query: 355 --LPKYATSLTNTQEKLFLQE--NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC 410 +P L + ++ +E + + + S + +++ + Sbjct: 361 NVVPAALFMLKESNAPVWREETLPVTTVRETMQSATELPAIRYGLHQDTHDRSSLVLRVL 420 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 QI+ +I++ +DGL I+DQHAAHER+++E + ++ ++ +Q LL P ++D E + Sbjct: 421 GQINDCFIVAAGSDGLYIIDQHAAHERILYEHL--AQSAGRVPAQQLLVPRVVDFDERDI 478 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 LI++++ + LG + E+ GP ++ + E+P+ + I LLR+I+ + + T + Sbjct: 479 DLILQNEPLFYELGFRLEQIGPRSMRLLEVPSDIPGTEIEGLLREILSALHNMQTPKAHE 538 Query: 531 DRIENI-LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 I +I L T AC ++++G + +M L+ E+ C HGRP ++ +++ Sbjct: 539 --IRHIFLQTAACRSAVKAGENLNMRQMQALIDELCSTNRPYTCPHGRPAIVRFTSAELA 596 Query: 590 KLFGR 594 K+F R Sbjct: 597 KMFKR 601 >gi|87311735|ref|ZP_01093850.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645] gi|87285519|gb|EAQ77438.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645] Length = 637 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 185/639 (28%), Positives = 329/639 (51%), Gaps = 48/639 (7%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M IR+L ++N+IAAGE+IERP+ +KEL+ENS+DA ++RV+ I GG +I DN Sbjct: 1 MPTIRQLPTSVVNKIAAGEVIERPASVVKELMENSVDAGATRVDVTIEHGGSELVRIADN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +++ ++V H TSKI +DD ++ T GFRGEAL SI VS L SR P+++ Sbjct: 61 GCGIAEDQLALSVASHATSKILDADDLFHVGTLGFRGEALASIAEVSQFRLRSRIPESDA 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 A++ I+G ++ V P GT +EVR+LFF P R FL++ Q E +++ R+A+ Sbjct: 121 AAEMYINGGQLVEVTPCGAAVGTTIEVRNLFFNTPVRKKFLRTTQTEFGHLSEAFTRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P V FT Y + + N+ ER++ G++ + + ++ + I L GY Sbjct: 181 AFPHVHFTLKHGARQIYDL---PPSDNWRERLAAFFGDEIATHLIPIDNADDTIRLSGYV 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P FNRGN ++F+NGR ++D+ + + AY + GRYP+ L L++ P VDV Sbjct: 238 ADPKFNRGNNKMQFLFLNGRHIRDRALQHALSEAYRGLLLTGRYPIAFLRLQMPPEMVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS----------------------- 334 NVHP K +RF++ I + ++ +++ ++ + Sbjct: 298 NVHPTKLEVRFQDSGRIYSQLLGTLRTKFLSTDLTATYKPVDSDELHGNNRHGAASGGGN 357 Query: 335 ----------------SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 +K + + +D + + + +Q L+ +R Sbjct: 358 INGHDVETAARMREELVAWAKGQLPADDEDLRERRSVQESLDLDFRSQRHPPLELSRFDR 417 Query: 379 NDLLPSDDPTYSEDNDPVEESEATHYQLGIACA---QIHQNYIISQTTDGLVIVDQHAAH 435 + L + + + + Q+H+ Y++++T +G+V++DQHA H Sbjct: 418 DALAAASSRSNGQPGEGARLDAPHETPPQPTPGRALQLHRRYLVTETPEGMVVIDQHALH 477 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 ER+++E+ R+ + ++ +Q LL PE + L E + +M+ E L +LG + E FG + I Sbjct: 478 ERILYEEFREKALAGRLETQNLLAPETMHLSPSEFSAVMQAQEPLAQLGFQVESFGGDTI 537 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 I PAIL ++ + LR+IID ++ +D ++ +L M+C ++++G ++ + Sbjct: 538 LISSYPAILDRRKPSETLREIIDHLVGDGKRPDRRDLLDELLHMMSCKAAVKAGDRLSAE 597 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 E++ LL ++ C HGRPT + ++++ F R Sbjct: 598 EIDALLELRHLCQDAHHCPHGRPTSLVFTKEELDRRFER 636 >gi|223933913|ref|ZP_03625875.1| DNA mismatch repair protein MutL [Streptococcus suis 89/1591] gi|223897415|gb|EEF63814.1| DNA mismatch repair protein MutL [Streptococcus suis 89/1591] Length = 645 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 177/632 (28%), Positives = 304/632 (48%), Gaps = 44/632 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+ENS+DA +S++E + G QITDNG G Sbjct: 4 IIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDNGEG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI D I T GFRGEALPSI +VSH+ + + + G Sbjct: 64 IAPDEVALALRRHATSKIKNQSDLFRIRTLGFRGEALPSIASVSHMIIETATADSAHGLH 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G I PV+ GT + V DLF+ PARL +++S+Q E + I DV+ R+++A+P Sbjct: 124 LEAKGGVIEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHIVDVVNRLSLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++F ++ + G + IS + G VE+ + + + GY +P Sbjct: 184 EMAFALVNEGR---ELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEDLDFQISGYVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ +EIDP DVNVH Sbjct: 241 ELTRANRNYISIFINGRYIKNFLLNRAILEGYGSKLMVGRFPLAVISIEIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + I ++I +A+ ++ + ++ + S+ + A + LP Sbjct: 301 PTKQEVRISKEKELMTLIREAISQALKEQDLIPDALENLAQSSTRPKVKAEQGTLPLREP 360 Query: 361 -----------------------------------SLTNTQEKLFLQENRLSTNDLLPSD 385 N + E + ++ Sbjct: 361 KIYYDTIKQDFFLKPDVVAEDVKPLEEDRQEIVESPAENKPTSVQFAERQSVESEDQEHP 420 Query: 386 DPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 + + E D ++ + + Q+H Y+ +Q GL I+DQHAA ER+ +E Sbjct: 421 NLSAKELAKLADKLDREATSTFPELEYFGQMHGTYLFAQGKTGLYIIDQHAAQERVKYEY 480 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 R+ ++Q LL P I + + + ++ + L ++G+ E +G N +RE P Sbjct: 481 YREKIGQVDNSAQQLLVPYIFEFPQNDALDLVHKMDALRQVGVNLEEYGSNQFILREHPI 540 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 + ++ I + ++ D ++ + +++ + M+C SI++ + LLR Sbjct: 541 WMKEEEIESGIYEMCDMLLLTDQV-SIKQYRAELAIMMSCKRSIKANHALDDYSARDLLR 599 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ N C HGRP + SD+EK+F R Sbjct: 600 QLSYCQNPYNCPHGRPVLVHFSKSDMEKMFRR 631 >gi|326202165|ref|ZP_08192035.1| DNA mismatch repair protein MutL [Clostridium papyrosolvens DSM 2782] gi|325987960|gb|EGD48786.1| DNA mismatch repair protein MutL [Clostridium papyrosolvens DSM 2782] Length = 664 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 193/664 (29%), Positives = 320/664 (48%), Gaps = 75/664 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E N+IAAGE++E+P+ +KEL+ENS+DA ++ + I GG S+ +ITDNG Sbjct: 3 RIIVLDENTSNKIAAGEVVEKPASVVKELVENSIDAGATSISVDIKNGGISYIKITDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +++ +A +RH TSKI ++D ++ T GFRGEAL SI +V+ + LM++ + G Sbjct: 63 GMDEDDVEIAFERHATSKIKRAEDLDSVITMGFRGEALASIASVASVELMTKTAASTYGM 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G VR GT ++DLFF PAR FLK + E I+D I R+A+ Sbjct: 123 YVHIRGGVFQDVRQTGCPVGTTFIIKDLFFNTPARYKFLKKDSTEAGYISDTISRIALGN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF + + + + N + I + G++ I + V + +I + GY G Sbjct: 183 PDISFKLT---NGKTTLIHTPGNNDLKSVIYSIYGKELIKDLVAVEYADEKIKISGYVGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N ++IN R V+ K + ++ A+ + R+P VL ++I+P VD NV Sbjct: 240 PEAARSNRNYQSLYINKRYVKSKMVSYSVEQAFTSILMKNRFPFFVLNIDINPVLVDANV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ------------ 347 HPAK+ +RF + + + I ++ A+ G + V + Sbjct: 300 HPAKTEVRFADESNLSRTIYMAVSNALTTGGSLFNPVSVPNKDRELFKFTGNSQNKVEYL 359 Query: 348 -------------------------DNAPKTHLPKYATSLTNTQ-----------EKLFL 371 + KT + K +TSL Q E+ + Sbjct: 360 QKEIELNKQEDYKKAEEIRLFTKALEPLAKTDVNKVSTSLEKPQTDTSSFTFTKSEEYNV 419 Query: 372 QENRLSTNDLLPSDDPTYSEDNDPVEESE---------------------ATHYQLGIAC 410 ++ + T ++ + +++ ++E++ Sbjct: 420 RQPQEVTVEVKQEKTTELNNNSEVIKEADFSEEVAAVLSEDDGEIHTENVHPELADMKYI 479 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 Q YI+ Q+ D LV+VDQHAAHER+I+EK+R F+S + T+Q LL P +I L E Sbjct: 480 GQAFSTYILLQSNDELVMVDQHAAHERIIYEKLRVKFDSQENTTQLLLEPVVIQLQPFEL 539 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 + E L +G E FG N+I IR IP ++ + + ++ ++ +S + Sbjct: 540 DAVKSKHELLKGIGFVFEDFGNNSIIIRGIPYMVGDCSPRDIFIELTQKLQESIRPVSTP 599 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 + I+ T+AC +I++ +K+ E+++LL E+ K C HGRPT I+L +IEK Sbjct: 600 -LADEIIHTIACKAAIKANKKLDEKEVHQLLIELSKTGRRYTCPHGRPTVIRLTKYEIEK 658 Query: 591 LFGR 594 +F R Sbjct: 659 MFKR 662 >gi|163790797|ref|ZP_02185223.1| DNA mismatch repair protein [Carnobacterium sp. AT7] gi|159873977|gb|EDP68055.1| DNA mismatch repair protein [Carnobacterium sp. AT7] Length = 659 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 191/657 (29%), Positives = 319/657 (48%), Gaps = 69/657 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LS+ + NQIAAGE+IERP+ +KELIEN++DAESS+++ +I G QI DNG Sbjct: 3 KIQELSDVLANQIAAGEVIERPASVVKELIENAIDAESSQIDILIEEAGLKKIQIIDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+ A +RH TSKI DD I T GFRGEALPSI +VS ++L + G Sbjct: 63 GIEPEEVQNAFKRHATSKIYSRDDLFRIRTLGFRGEALPSIASVSEVSLETST-GGTRGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G KI + G+ + V +LFF PARL ++KS Q E + +TD++ R+AI++ Sbjct: 122 YLSLKGGKIIEEKSNEARKGSKITVENLFFNTPARLKYVKSLQTELSNVTDIVNRLAISH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++F + ++ + NG+ + ++ + G E+N++ + + G+ + Sbjct: 182 PRIAFRLINDGN---QLLRTAGNGDLKQTLAGIYGVAAAKKMREINKEDLDFRVSGFISL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + INGR +++ + I Y + +GR+P+V + +E+DP VDVNV Sbjct: 239 PELTRASRNYISIIINGRYIKNYLLNKAIIAGYRSKLMVGRFPMVAIEIEMDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS--------------VLSKKMISSF 345 HP K +R + I +IQ ++K+ + + ++++ F Sbjct: 299 HPTKQEVRISKEKELMQLIELAIQDCLSKEQLIPDALENLSFKKKINRPIEQNEQITFEF 358 Query: 346 HQD-----------------------NAPKTHLP-KYATSLTNTQEKLFLQENR------ 375 Q+ + + P + ++ + E FL+E Sbjct: 359 QQETNIENKSEENEETESTHLARESYYSHRQSTPFEKESNYVDEVEPFFLKEKERESLIS 418 Query: 376 -LSTNDLLPSDDPTYSEDNDPVEESEAT-----------------HYQLGIACAQIHQNY 417 + + T SE D +ES + Q+H Y Sbjct: 419 GVPEEEASDVPIETVSELVDYHQESPLKTADKLMKKHAKVKESIGQFPTLEYVGQMHGTY 478 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 + +Q GL I+DQHAA ER+ +E R+ Q LL P ++D + I E++ Sbjct: 479 LFAQNETGLYILDQHAAQERIKYEYFRKKIGEVSTDLQDLLVPIMLDYPNSDAIKIKENN 538 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 + L +GI E FG N+ +R P ++ ++R++ID ++D + ++ E Sbjct: 539 DALEMVGIFLEPFGQNSFLLRSHPVWFNQGEEETIVREMIDLLLDHG-SVSVAKFREATA 597 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C GSI++ + E LLR+++K N C HGRP I D+EK+F R Sbjct: 598 IMMSCKGSIKANHYLNDAEARALLRDLKKTENPYNCPHGRPVLIHFTNKDMEKMFKR 654 >gi|326693691|ref|ZP_08230696.1| DNA mismatch repair protein MutL [Leuconostoc argentinum KCTC 3773] Length = 665 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 182/651 (27%), Positives = 315/651 (48%), Gaps = 62/651 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS + NQIAAGE+IERP+ +KEL+EN++DA +++++ V+ G+S ++ DNG Sbjct: 3 KIHELSNLLANQIAAGEVIERPASVVKELVENAIDAGATQIDVVVENAGQSLIRVVDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A RH TSKI+D D NI + GFRGEALPSI A++ +TL + G Sbjct: 63 GIDPEDVPLAFTRHATSKITDRHDLFNIVSLGFRGEALPSIAAIADVTLNTTTETAPAGV 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I G K V P GT++ VRDLF+ PARL +LK Q E + ITD++ R+A+AY Sbjct: 123 MYHIKGGKEVQVTPANGRRGTVISVRDLFYNTPARLKYLKRPQTELSRITDIMNRLALAY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++FT + + + NGN + I+ + G D + + + + + G+ + Sbjct: 183 TNIAFTVTADNRP---LLKTTGNGNQQQVIAAIYGRDVAQKMLAIAGEDDTFNITGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P RG+ V INGR +++ + + + Y + +GR+P+ V+ + DP +DVNV Sbjct: 240 PELTRGSREYLTVLINGRFIKNFAVSNAVIHGYGSKLMVGRFPMGVININTDPLLIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---VLSKKMISSFHQDNAPKTHLP 356 HP KS IR + ++++I+ + ++ + + + ++ + + H P+ H Sbjct: 300 HPQKSEIRLAKEDELSALLVETIKARLAQENLIPDAYENLYGQQSVITAHDRPTPQQHPT 359 Query: 357 KYATSLTNT-----------------------------------------------QEKL 369 + A +T + + L Sbjct: 360 QRAPWVTTSDTVVTQPIEPAKSTETAVDSPARVIHITNRTQLTSDAVQAFSEKYANEPAL 419 Query: 370 FLQENRLSTNDLLPSDDPTYSEDNDPVEE------SEATHYQLGIACAQIHQNYIISQTT 423 + E N + S + V+E + + + Q+H ++ +Q Sbjct: 420 TVFEQPAVVNQVTESAITYQAPTEKAVQETLDVTPTRPSGFPTLAYIGQMHGTFLFAQNE 479 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 GL ++DQHAA ER+ +E RQ Q LL P ++ + I ++ DL + Sbjct: 480 TGLFLIDQHAAQERVNYEYYRQIIGDVSADQQRLLVPITLNYATSDMLKIADYAADLTAV 539 Query: 484 GIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY 543 G+ E FGPN + +RE P +K+ + + +R++ID ++ T+ + E M+C Sbjct: 540 GLHLETFGPNTLIVREHPTWFAKEQVAETIREMIDWLLRDGH-LTVAEFRERTAIMMSCK 598 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +I + + + LL + + N C HGRP + L+++EK+F R Sbjct: 599 RAIPANMHLSDSQARTLLETLSQAENPYNCPHGRPVLTQFTLTEMEKMFKR 649 >gi|296117465|ref|ZP_06836052.1| DNA mismatch repair protein MutL [Gluconacetobacter hansenii ATCC 23769] gi|295975986|gb|EFG82777.1| DNA mismatch repair protein MutL [Gluconacetobacter hansenii ATCC 23769] Length = 633 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 212/624 (33%), Positives = 341/624 (54%), Gaps = 36/624 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+LSE+++N+IAAGE+IERP+ A+KEL+EN+LD+ + R+ + GG ++ D+G G Sbjct: 13 IRRLSEQVVNRIAAGEVIERPAAALKELVENALDSGAQRISVALLHGGIERIEVIDDGCG 72 Query: 63 MTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT +++ +AV+RHCTSK+SD+ I T GFRGEALPSIGA + L + SR T I Sbjct: 73 MTPDDLRLAVERHCTSKLSDETLVRIATLGFRGEALPSIGAAARLNVTSRTRGAPTAWSI 132 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 + G ++ RP A GT V V DLFF PAR FLKS +VE+ + +RR+A++ P Sbjct: 133 RVEGGRVDEPRPCAGVVGTCVVVEDLFFATPARRKFLKSARVESGHAENTVRRLALSAPH 192 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 V+F + + + R + ++ + + + + ++ L GY P+ Sbjct: 193 VAFRLQFDQRVVLDLPA----QDMAARAAAILDAGQADGLIPVEAERGDLRLSGYICAPS 248 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 +R AN + +NGR V D + + +R AY + GR+ VV L L+I P QVDVNVHP Sbjct: 249 VHRATANGQLLLVNGRPVVDPVLRTAVRVAYRNVMEHGRHAVVALSLQIPPEQVDVNVHP 308 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAIN-------------KKGISTSSVLSKKMISSFHQD 348 AK+ +R+ + +R +I ++ +A+ + + + + + Sbjct: 309 AKTELRYADAAAVRALVIGALGRALGIGAGVAGVRPGLLQSRPAGGARIWYPPEPASAPP 368 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE----------- 397 +P P + E RL D+ P + Sbjct: 369 VSPVQMSPFPPDGDDGPPMAEGVAERRLPLMDIAPGARQVVRWSEADIPAVQGAVSSPAP 428 Query: 398 -ESEATHYQLGIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 A + LG A AQ+ YI+++T G LV+VDQHAAHERL E++R + +I +Q Sbjct: 429 NPEPAADFPLGAAVAQVLGTYILAETARGELVLVDQHAAHERLTHERLRAQYLGGEIRAQ 488 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL PE++++ G+ L+M + L LG++ + FG +A+ +R +PA+L + +LRD Sbjct: 489 RLLLPEVVNMPRGQADLLMSFADTLSALGLEIDAFGGDAVMVRTVPALLGGGDAAAMLRD 548 Query: 516 IIDEIIDSS-----TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 + +E+ + + R++ I+A MAC+GS+R+GR++ EMN LLR+ME+ P + Sbjct: 549 LAEELAEDELLAPAQAQAVDGRLDAIIARMACHGSVRAGRRLTHEEMNALLRDMERTPRA 608 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 C+HGRPT++KL+ D+E++FGR Sbjct: 609 GTCSHGRPTWLKLEKGDLERMFGR 632 >gi|322390454|ref|ZP_08063974.1| DNA mismatch repair protein HexB [Streptococcus parasanguinis ATCC 903] gi|321142853|gb|EFX38311.1| DNA mismatch repair protein HexB [Streptococcus parasanguinis ATCC 903] Length = 686 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 182/635 (28%), Positives = 308/635 (48%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L E + NQIAAGE+IERP+ +KEL+ENS+DA +S++ I G +ITDNG Sbjct: 42 QIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIVVEIEEAGLKSIRITDNGE 101 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+ +A++RH TSKI D I T GFRGEA+PSI +VS LTL++ G Sbjct: 102 GIAHDEVALALRRHATSKIKSQADLFRIRTLGFRGEAMPSIASVSILTLLTAQEGAAHGT 161 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G +I V P GT + V DLFF PARL +LKS+Q E + I D++ R+++A+ Sbjct: 162 KLVAKGGEIEEVEPATSPVGTKITVEDLFFNTPARLKYLKSQQAELSHIVDILNRLSLAH 221 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT K + GN + I+ V G V + + + + G+ + Sbjct: 222 PEIAFTLINDGKEMTK---TAGTGNLRQAIAGVYGLASAKKMVAIENRDLDFEVTGFVSL 278 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N +FINGR +++ + I Y + +GR+P+ ++ ++IDP DVNV Sbjct: 279 PELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAIINIKIDPYLADVNV 338 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I A+ ++ + ++ + + + +T LP Sbjct: 339 HPTKQEVRISKERELMALISQAIANALKEQDLIPDALENLAKSTIRRTEKPVQTTLPLKE 398 Query: 357 ------------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS-------------- 390 K + + Q L + ST+ P + PT + Sbjct: 399 NRLYYDRESQDFKLRPEVADPQRPLTDEVTADSTSQENPVEKPTSAIKFAERKTVVYDEL 458 Query: 391 -----------EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 + D ++ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 459 DHPELDLASLDKAYDKLDGEEHSTFPELEYFGQMHGTYLFAQGNGGLYIIDQHAAQERVK 518 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E+ R+ + Q LL P I + + + + L +G+ E +G N + +RE Sbjct: 519 YEEYRESIGDVDGSQQQLLVPYIFEFPADDLIRLQQRKHLLEEVGVYLEEYGANQLILRE 578 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P + ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 579 HPIWMKEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHTLDDYSARD 637 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L+ ++ + N C HGRP + SD+EK+F R Sbjct: 638 LIYQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 672 >gi|330994147|ref|ZP_08318075.1| DNA mismatch repair protein mutL [Gluconacetobacter sp. SXCC-1] gi|329758614|gb|EGG75130.1| DNA mismatch repair protein mutL [Gluconacetobacter sp. SXCC-1] Length = 620 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 220/613 (35%), Positives = 352/613 (57%), Gaps = 26/613 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+LSE+++N+IAAGE+IERP+ A+KEL+EN++D+ + R+ + GG ++D+G G Sbjct: 12 IRRLSEQVVNRIAAGEVIERPAAALKELVENAVDSGARRIHIRLDRGGIDRIDVSDDGCG 71 Query: 63 MTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 M+ +++ +AV+RHCTSK+ D+ +I T GFRGEALPSIGA + L++MSR ++ I Sbjct: 72 MSPDDLLLAVERHCTSKLRDETLVHISTLGFRGEALPSIGAAARLSVMSRQAGADSAWSI 131 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 + G +S+ P A PGT V V DLFF PAR FLKS +VE+ +V+RR+A++ P Sbjct: 132 RVEGGVVSTPEPCAGAPGTRVLVEDLFFATPARRKFLKSPRVESGHAENVVRRLALSAPH 191 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 ++F + + R++ ++ + + + + ++ L GY P+ Sbjct: 192 IAFRLEFDDRLILDLPA----QDRAARVAAILESGDADGLLAVEGQRGDLKLSGYICAPS 247 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 +R AN + +NGR V D + + +R AY + GR+ VV L LEI P QVDVNVHP Sbjct: 248 VHRATANGQMLLVNGRPVVDPVLRTAVRVAYRNVMEHGRHAVVALSLEIPPEQVDVNVHP 307 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAI--------------NKKGISTSSVLSKKMISSFHQ 347 AK+ +R+ + +R +I ++ +A+ +G S + + ++ Sbjct: 308 AKTELRYADSAAVRALVIGALGRALGTGAGVAGVRPDLIQSRGSSPARIWYPPERNADAA 367 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 D + + P + F E+ L L + +D + A + LG Sbjct: 368 DLSTRLARPLVPARPDSGLPSGF-AESSLPLAGLPAARQTAPDTLHDQAATTAAMAHPLG 426 Query: 408 IACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 A AQ+ YI+SQT DG LV+VDQHAAHERL E +R+ + +I +Q LL PE++DL Sbjct: 427 AAVAQVLGTYIVSQTADGALVLVDQHAAHERLTHEILREQYMGGEIRAQRLLLPEVVDLP 486 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS-- 524 + +++ L RLG++ E FG A+ +R +PA+L K+N +LRD+ +E+ Sbjct: 487 ARQVDVLLSFGAALARLGVEIEPFGGTAVLVRAMPALLGKENPGGMLRDLAEELEADDLA 546 Query: 525 ---TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 L R++ ++A MAC+GS+R+GR++ EMN LLR+ME+ P + C+HGRPT++ Sbjct: 547 SPAQADALDARMDAVIARMACHGSVRAGRRLTHEEMNALLRDMERTPRAGTCSHGRPTWL 606 Query: 582 KLKLSDIEKLFGR 594 KL+ +DIE++FGR Sbjct: 607 KLEKADIERMFGR 619 >gi|322436381|ref|YP_004218593.1| DNA mismatch repair protein MutL [Acidobacterium sp. MP5ACTX9] gi|321164108|gb|ADW69813.1| DNA mismatch repair protein MutL [Acidobacterium sp. MP5ACTX9] Length = 659 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 195/659 (29%), Positives = 316/659 (47%), Gaps = 69/659 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR LS+++ NQIAAGE++ERP+ +KEL+ENSLDA ++R+ + GG+ +I DNG Sbjct: 3 RIRILSDQVANQIAAGEVVERPASVVKELLENSLDAGATRIRIEVEAGGRKLIRIVDNGH 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A +RH TSK+ SDD +I T GFRGEALPSI +V+ L+L +R ++++G Sbjct: 63 GMGKDDALLAFERHATSKLRTSDDLLSIATLGFRGEALPSIASVARLSLETRAAEDDSGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I I+G I +V + GT + +RDLFF PAR FLKSE E + I ++ A+A+ Sbjct: 123 HIEIAGGNILTVEDAGLPIGTTIAIRDLFFNTPARRKFLKSESTELSHIAALVTHYALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN---------- 229 F S + + +R+ Q+ G D + + + Sbjct: 183 FNRHFEL---HSTTQALLVAPAVASAGDRLFQIFGRDTAALMIPTTAEMDFTRAGLPEPP 239 Query: 230 --------------EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + + G+ P + N N YVF+N R ++D+ +L + AY Sbjct: 240 PWKRELDYEAPDPGFLRISGFVSKPELQKLNRNSVYVFVNQRLIRDRLVLHALTEAYRNI 299 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS- 334 IP +PVV+L LE+ P +VDVNVHPAK+ +RFR P + +FI +++ + + + S Sbjct: 300 IPPSSFPVVLLFLEMPPHEVDVNVHPAKTEVRFRQPAFVHDFIRDTVRTTLMQARPAASF 359 Query: 335 -----SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST----------- 378 SS D +P P + F Q + + Sbjct: 360 ASALNGAPYNDAHSSLLIDVSPLPGAPSDPVFDPRRAPEGFPQSDHDPSHEDSAPFFLAP 419 Query: 379 -----------------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 + + + + +E QI Sbjct: 420 IPVPESPGRLDFSAAATLAVGYEQEAAHAPEQVDYGKDRVIENPSLYSLSTLKPLGQIRD 479 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 ++I++ +GL IVDQH AHER++FEK+ ++ N+ +I Q LL P +IDL+ + Sbjct: 480 SFILAVNDEGLWIVDQHVAHERILFEKILRERNTEQIQRQRLLMPLLIDLMPDQMVAFAR 539 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 E+L R G +AE FGP +A++ P L + + Q++ D++ T R Sbjct: 540 IAEELERQGFEAEPFGPRTLAVKSAPVGLEGRELEQMIEDLLSVEDRIGQTENADTRARR 599 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 I A+MAC+ +++ ++ +++ LL E+ K + C HGRP ++ +IEK F R Sbjct: 600 IAASMACHAAVKINMPLERSKIDWLLAELGKTEYPTSCPHGRPIALRYSHKEIEKAFQR 658 >gi|289424087|ref|ZP_06425873.1| DNA mismatch repair protein MutL [Peptostreptococcus anaerobius 653-L] gi|289155512|gb|EFD04191.1| DNA mismatch repair protein MutL [Peptostreptococcus anaerobius 653-L] Length = 627 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 192/629 (30%), Positives = 309/629 (49%), Gaps = 42/629 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + IN+IAAGE++ERPS IKEL+ENS+DA SS + I GGK +I DNG Sbjct: 3 KINILDDSTINKIAAGEVVERPSSIIKELVENSIDAGSSYISIEIENGGKDLIRIVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A RH TSKI+ +D S++ + GFRGEAL SI AVS L ++++ + G Sbjct: 63 GIDKDDVNKAFLRHATSKINTVEDLSSLESLGFRGEALASISAVSKLEMLTKTEEALIGL 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G KI + N GT + VRDLFF PAR FLKS Q E ITD++ ++AI Sbjct: 123 RIVLDGGKIREKEATSANRGTQISVRDLFFNTPARRKFLKSNQAEAQAITDIVNKIAIGN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + Y+ +G+ I + G D N +E++ +S ++ GY G Sbjct: 183 PSIKIKYINNSKTIYETL---GDGSIINAIRMIYGRDISENLIEIDYRSKYFSISGYLGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 RGN N +++INGR ++ I I AY IP+ +YP+ + + +DP +VDVN+ Sbjct: 240 NNIYRGNRNHQHLYINGRYIKSPNISKKINDAYKAIIPINKYPIYFVNISVDPAKVDVNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP+K ++F I N + ++ + K + + + +++++ + Y+ Sbjct: 300 HPSKLEVKFDQEEEILNELSDFVRGILLKSSLVGRYKDNSRGKDLYNKNSFAGFNSFSYS 359 Query: 360 T--------------------SLTNTQEKLFLQENRLST------------NDLLPSDDP 387 S NT E +Q + + T D D Sbjct: 360 PKEVENNLTSTAIREDVSNSCSNQNTNESPRVQADMIQTPIRLSDINNGGIQDKKEVDSK 419 Query: 388 TYSEDNDPVEESE--ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 + + +EES + I YII D ++++DQHAAHER+ FE Sbjct: 420 MEYQQSSFIEESPDRNPDFIGLKFIGIIFDTYIIFSKNDDMIMLDQHAAHERIRFEMYMS 479 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 + + I+ Q L+ P I+DL + + ++ + G E FG +I+IR +P Sbjct: 480 KYKANDISVQMLIDPIIMDLDANDMDTVRKNIDVFSSFGFLVEEFGHRSISIRGLPNTFG 539 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 + + + ++ID + + D + +A +AC +I+ K+ E L+ ++E Sbjct: 540 EPESKRFIYELIDGL---GKIDNIYDTKYDEIAEIACKSAIKGNDKISIEEAKHLIGQLE 596 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + N C HGRPT +K+ +IEKLF R Sbjct: 597 ECSNPYTCPHGRPTMVKMTRYEIEKLFKR 625 >gi|315646576|ref|ZP_07899694.1| DNA mismatch repair protein MutL [Paenibacillus vortex V453] gi|315278219|gb|EFU41539.1| DNA mismatch repair protein MutL [Paenibacillus vortex V453] Length = 660 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 173/659 (26%), Positives = 292/659 (44%), Gaps = 71/659 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L E I NQIAAGE++ERP+ +KEL+EN++DA S++++ + GG ++TDNG G Sbjct: 4 IRILDEHIANQIAAGEVVERPASVVKELVENAIDAGSTKIDVTVEEGGLDSIRVTDNGAG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ A RH TSKI++ D I + GFRGEALPSI AVS + L++ Q+ G + Sbjct: 64 IDPEDCETAFYRHATSKITEGRDLFQITSLGFRGEALPSIAAVSKVRLVTSNVQDGRGRK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G + A GT V++LFF PARL ++K+ Q E I+D + R+A++ P Sbjct: 124 IEIEGGHLRVNEETAAPRGTDFLVKELFFNTPARLKYMKTIQTELGHISDYMYRLALSRP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++FT + + NG+ + I+ + G + ++ + TL GY P Sbjct: 184 DIAFTLRHNGN---SLLQTLGNGDALQVIAAIYGTQSAKAMLAFEAENMDYTLSGYISRP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + R N N + INGR V++ ++ I Y +P+ R+P+VV+ L + P +DVNVH Sbjct: 241 DYTRANRNGMSLIINGRYVRNYGLMQAILRGYHTLLPINRFPLVVIQLTMHPSLIDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAI---------------------------------N 327 P+K +RF + F+ + I+K + Sbjct: 301 PSKLEVRFSKEQELFAFVEEEIRKVLQQEILIPRPAKQAIGKSEHAFIQEQLHFPNAQGR 360 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE-------------- 373 + + S Q + T P + ++ ++ L + Sbjct: 361 DASVRSREDGEAPAARSGDQSDQGMTSFPPHGSAWPEKRDHLQPESGIKRSYGDGSGGTP 420 Query: 374 -----NRLSTNDLLPSDDPTYSEDNDPVEE-------------SEATHYQLGIACAQIHQ 415 + S+ ++ N + E + Q H Sbjct: 421 ATASMRETAAASSYRSEYRYENKGNAHIPSVTKEWLQAASGPAPEIPPFPELTLIGQHHG 480 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 Y+I+Q GL ++DQHAAHER+ +E + F SQ LL P ++ E + + Sbjct: 481 TYLIAQNDSGLYLIDQHAAHERINYEYYYEQFGKPADASQELLLPITLEFTPSESEKVKQ 540 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 ++G+ E FG +R P K + ++ ++ + ++ + R + Sbjct: 541 RLHWFEKVGVYMEFFGGQTFLVRSHPFWFPKGDEKAIIEEMAEWVLSERNIDVAKLRETS 600 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +C SI++ +K+ E L++ + C HGRP + D+EK+F R Sbjct: 601 SI-MCSCKASIKANQKLTEQEAMTLIQRLGDCRQPYTCPHGRPIVVSFSAYDLEKMFKR 658 >gi|225174621|ref|ZP_03728619.1| DNA mismatch repair protein MutL [Dethiobacter alkaliphilus AHT 1] gi|225169748|gb|EEG78544.1| DNA mismatch repair protein MutL [Dethiobacter alkaliphilus AHT 1] Length = 605 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 186/611 (30%), Positives = 310/611 (50%), Gaps = 27/611 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E N+IAAGE++ERP+ IKEL+EN+LDA ++R++ IAGGG ++ DNG Sbjct: 3 RILLLDEVTANKIAAGEVVERPAAVIKELVENALDAGATRIDISIAGGGLESMRVADNGA 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +E++P+A+QRH TSKI ++D + + + GFRGEALPSI AVS L+SR ++ G Sbjct: 63 GMAAEDVPLALQRHATSKIQCAEDLTRVTSMGFRGEALPSIAAVSRFRLVSRRAEDMAGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G K V GT V V DLFF PARL F KS+ ET ITD ++R+A+A+ Sbjct: 123 EIEVEGGKTLQVTETGCPVGTEVRVEDLFFNTPARLKFTKSQGAETARITDTVQRLALAW 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF+ + NG + QV+G + + L+ + + L G+ Sbjct: 183 PNVSFSLTVNGK---NTLVTPGNGQLADAAGQVLGRQNMRQMIPLDWQGELLALHGFLAK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N N + F+N R ++ + ++TAY +P R+P ++ +E+D +VDVNV Sbjct: 240 PALSRANRNLQFFFVNKRPIRSPLLSDALQTAYQTLLPRNRFPAAIVFVEMDTSEVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS---------------TSSVLSKKMISS 344 HPAK +RF I ++ + A+ + + ++ + I Sbjct: 300 HPAKREVRFSRERDIYRQLLAGAKAALRQASLIGEMGTPHTAALRETAAATGFYDQAIDF 359 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 Q P+ ++P + + + E + + P+ T E + V E+ ++ Sbjct: 360 DRQKKLPQDNVPLESPFAGKREAEAVPAEIKETNETAEPAAAETNREATEDVRET-THNF 418 Query: 405 QLGIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 Q YI++Q+ G L +VDQHAAHER+++++++++ + + Q ++ Sbjct: 419 PRLRPIGQYRDTYILAQSQTGELYVVDQHAAHERVLYDQLKRELSDGTLPVQDVIPQ-TF 477 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 +L A +++ LG++ E FG N +R IP L +I++ D+ Sbjct: 478 ELDPLTAAALLKSLNIFAELGLRFETFGNNIFILRSIPMFFRHCLNQDDLTEILNSAADA 537 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 T+ E L M+C G++++ + + EM+ LL + + C HGRPT + L Sbjct: 538 DNTH----LFEKTLQMMSCKGAVKANQSLDPKEMSALLNNLAETSQPHTCPHGRPTVLVL 593 Query: 584 KLSDIEKLFGR 594 + + F R Sbjct: 594 TEQAVARNFRR 604 >gi|237733850|ref|ZP_04564331.1| DNA mismatch repair protein mutL [Mollicutes bacterium D7] gi|229383188|gb|EEO33279.1| DNA mismatch repair protein mutL [Coprobacillus sp. D7] Length = 610 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 173/612 (28%), Positives = 300/612 (49%), Gaps = 25/612 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR+L + + N+IAAGE+IERP+ +KEL+ENS+DA S++++ +I GG + QI DNG Sbjct: 3 KIRQLDDVLANKIAAGEVIERPANVVKELVENSIDANSTKIDVIIEEGGLNLIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ + RH TSKI D D I T GFRGEA+PSI ++S+ L + TG Sbjct: 63 GMVKEDALLCFSRHATSKIKDDQDLFCIQTLGFRGEAIPSIASISNFEL--KTSTGGTGT 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + GT ++V LF +PARL ++KS E I + R+++++ Sbjct: 121 TVTYEYGRFVECNESDSKKGTNIKVEKLFQNVPARLKYIKSTNAEFANIQTYLERLSLSH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F YK N NGN E IS + G + + ++ + +E + GY Sbjct: 181 PHIAFMLVHNGRTIYKTN---GNGNLLEVISNIYGLNVAKAMIPVDFEDDEFHVTGYVSK 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 NR + N +N R V++K + +I AY + RYP+ ++ +EIDP VDVNV Sbjct: 238 IDVNRASKNHMVTMVNSRVVKNKVSVDSINNAYRRYLADKRYPIAIVNIEIDPYLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK------- 352 HP+K +RF + +R I Q + A+ K ++ + K + P Sbjct: 298 HPSKLEVRFSKESQLRELIYQGVSDALAKVNLTYDATAEYKKTKAPLNLEQPSLDLTYES 357 Query: 353 -----THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-----EAT 402 P++ +++ ++ + + Y + + E+ E Sbjct: 358 VPIKTIEQPRFEADFPQNDQEVVFKDASFDDFTFVKEETSEYIIPDQQIIETKVEPREKL 417 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + Q+H YII + G+ IVDQHA ER+ +E + + + ++ + LL P Sbjct: 418 MKKKLFVKGQVHGTYIICEDETGMYIVDQHAGQERINYEYFLEKYQNLDLSMRDLLVPIT 477 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 ++ E +I E + L ++GI E FG + I+++P + + + D++ ++++ Sbjct: 478 LEYPLSEFLIIEERKDLLTKVGINLEVFGNSGYVIKQLPLWMQNIDEQVFIEDMMTQLLN 537 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 + ++ ++ +AT++C S+++ + + M ++ + + N C HGRPT I Sbjct: 538 DNKIDVIK-LQDHAIATLSCKASLKANTHLSTEGMQNIIDNLMRCDNPYVCPHGRPTIIY 596 Query: 583 LKLSDIEKLFGR 594 +IEKLF R Sbjct: 597 YSTYEIEKLFKR 608 >gi|195978975|ref|YP_002124219.1| DNA mismatch repair protein [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|238689788|sp|B4U0J7|MUTL_STREM RecName: Full=DNA mismatch repair protein mutL gi|195975680|gb|ACG63206.1| DNA mismatch repair protein MutL [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 660 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 176/648 (27%), Positives = 311/648 (47%), Gaps = 59/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +L E + NQIAAGE+IERP+ +KEL+EN++DA+SS++ I G QITDNG Sbjct: 3 TIIELPEVLANQIAAGEVIERPASVVKELVENAIDAKSSQITVEIEESGLKMMQITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S LT+ + + G+ Sbjct: 63 GMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKLTIKTATAEAEHGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG KI + V+ GT ++V +LF+ PARL ++KS Q E + DV+ R+++A+ Sbjct: 123 ILVASGGKIEQLEAVSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHVVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT + ++ S G+ + ++ + G + ++++ + + G+ + Sbjct: 183 PEIAFTLISDGK---QLTQTSGTGDLRQALAGIYGLNTAKKMIDISSADLDFEVGGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K IR + I +I +++ ++ + ++ + S+ +T LP Sbjct: 300 HPTKQEIRISKERELMALISTAISESLREQDLIPDALENLARSSTRSFSKPEQTSLPLQP 359 Query: 360 TSL--TNTQEKLFLQENRLSTNDLL----------------------------------- 382 + L + F +E +S + Sbjct: 360 SQLYYDPQKNDFFTKETVVSEDSPQGFNHEVLIDSDVKQVDNLQVAKTESEAAAPSVKYA 419 Query: 383 ----------------PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGL 426 + S+ D +E E + + Q+H Y+ +Q DGL Sbjct: 420 SRPDPMLSDGEHPGLDVHNKQKLSQMLDRLENEEQSVFPELDYFGQMHGTYLFAQGRDGL 479 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 I+DQHAA ER+ +E R + Q LL P + + + + E L+ +GI Sbjct: 480 FIIDQHAAQERVKYEYYRDKIGEVDNSLQQLLVPYLFEFSGSDFINLQEKMSLLNEVGIY 539 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E +G + +RE P + + I + ++ D ++ ++ +++ + M+C SI Sbjct: 540 LEPYGNHTFILREHPIWMKEAEIESGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKRSI 598 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + +LL ++ + N C HGRP I +D+EK+F R Sbjct: 599 KANHSLDDYSARQLLLQLAQCKNPYNCPHGRPVLINFSKADMEKMFRR 646 >gi|224370233|ref|YP_002604397.1| MutL [Desulfobacterium autotrophicum HRM2] gi|223692950|gb|ACN16233.1| MutL [Desulfobacterium autotrophicum HRM2] Length = 638 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 185/636 (29%), Positives = 312/636 (49%), Gaps = 47/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + N+IAAGE++ERP +KEL+EN+LD+ ++R+ I GG+ +I+DNG G Sbjct: 4 IRILPDILTNKIAAGEVVERPVSVVKELVENALDSGATRIVAEIERGGRDLIRISDNGSG 63 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + +A++R+ TSKI +D I TFGFRGEALPS+ AVS TL +R + + G + Sbjct: 64 MSPDNALLAIERYATSKIFTDEDLFAIKTFGFRGEALPSMAAVSKFTLTTREQEGHAGTR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G +I V+ GT+VEV L++ PAR FLK E I DV MA+ P Sbjct: 124 IRIHGGRIMDVQETGAPAGTMVEVAQLYYNTPARRKFLKGVNTEMGHIADVFSGMALGNP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F + S + R +V G + N + ++EI + G+ P Sbjct: 184 GVGFRLIHNNRP---VKAFSASATMETRAGEVFGPATLENLKRVELVADEIAITGFLSDP 240 Query: 241 T---FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 F R A +F+N R V D+ +++ I Y + GRYP+ ++ + + P +VDV Sbjct: 241 VDPLFTRSTARNLRLFVNNRLVNDRGLVAAIFQGYRGRLMKGRYPLGLIFVTLPPDRVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAIN---------------------------KKG 330 NVHP+K +RF + I + ++Q++++A + + G Sbjct: 301 NVHPSKLEVRFCDQRRIFSLVVQAVREAFSGSYKGTAPAASQVKEPTETNRIDRSLFQWG 360 Query: 331 ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQEN---------RLSTNDL 381 S + + + LP+ +S + N L D Sbjct: 361 TPAKDSSSPSALEIEPEPLFSEPTLPEPPSSKPPVSGRPLPDSNVPDSTVSDLSLHEPDH 420 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIAC-AQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 ++ + E + E + + Q+ YI+ + +V+VDQHAAHER+++ Sbjct: 421 FLAESDVWFEPVPVLPEKQRQQGKSDPIIVGQVFGTYIVVEDNGEMVVVDQHAAHERIVY 480 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 EK+++ ++ + SQ+L+ PE ++L E L+ DL +G++ E FG A ++ I Sbjct: 481 EKLKKRSDNHRPPSQSLVVPETLELTYREADLLESILPDLAAIGMEIEPFGGTAFIVKSI 540 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQD--RIENILATMACYGSIRSGRKMQSIEMN 558 PAI+ +++ L+ DI+ +++S + ++ + MAC+ +IR+ + EM Sbjct: 541 PAIIEHRDVRPLVLDIVANLVESGGDAGGETGQWLDECIILMACHTAIRANNPLNHREMK 600 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ N C HGRP I+ + +E++F R Sbjct: 601 DLLLALDDCENPDHCPHGRPIRIRWDIHALERMFKR 636 >gi|118340526|gb|ABK80576.1| putative mutL [uncultured marine Nitrospinaceae bacterium] Length = 643 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 182/595 (30%), Positives = 304/595 (51%), Gaps = 5/595 (0%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR LS+ + NQIAAGE++ERP+ +KEL+ENS+DA ++ + I GGGK +I DNG Sbjct: 51 QIRVLSDDLANQIAAGEVVERPASVVKELVENSIDAGANLIRLDIEGGGKKKIRIMDNGM 110 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM EE +A RH TSKIS +D NI + GFRGEALPSI +V+ + S ++ G Sbjct: 111 GMAPEECLLAFSRHATSKISQFEDLDNIQSLGFRGEALPSIASVAKVRCTSARSESEGGK 170 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + G ++ + VA GT +EV LF+ PAR FLK + E + IT V+ + A+A Sbjct: 171 LIVVEGGELVEQKDVACTRGTTLEVAQLFYVTPARSKFLKGDSTEFSHITQVVTQQALAN 230 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + F + R++++ G D + +E+ +S + + G+ Sbjct: 231 PHIQFHLTHNGREVINTL---PTDQLHYRVAELFGRDLAKSLLEVEAQSGDYQISGFVSS 287 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + R + N Y F+NGR V+DK IL + Y+ +P G++P + L L +DP+ +DVNV Sbjct: 288 PVYTRSSRNAQYCFVNGRFVRDKVILHATQQGYSHLLPKGQHPAMFLYLTMDPKLLDVNV 347 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP+K+ +RF + F+ ++ A+ K + + + + + Sbjct: 348 HPSKAEVRFAFQQDVHQFVAHGVRAALEKNQQVNLTTARDETDIPLQEPSYSTRSSYQPP 407 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + + L ++ + + + Y Q+ +++II Sbjct: 408 QWTSPPPVQGDLSQSLRTMLSPDAESTQQITCFDKAPTPVSNLIYSEFEPLGQLDRSFII 467 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 Q G+++VDQH AHER+++E+ R + K+ Q LL P I+L E ++ H Sbjct: 468 MQGKQGVLVVDQHVAHERILYERFRAFAKNRKVEVQKLLFPLPIELSPEETEVLTPHLTR 527 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L LG++ E FG N +R +PAIL + +LLR++I+ + + L ++ E++L Sbjct: 528 LLDLGLELELFGKNEFLLRSVPAILKNGDHEKLLREMIESLPKDAHGDVLNEKYEDVLIM 587 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C +I+ + ++ +L+ ++E+ C HGRP + + DI K F R Sbjct: 588 MSCRNAIKVNHTLNFDQIKKLISDLEQTSMPYTCPHGRPISLLFYMDDILKKFLR 642 >gi|229829058|ref|ZP_04455127.1| hypothetical protein GCWU000342_01143 [Shuttleworthia satelles DSM 14600] gi|229792221|gb|EEP28335.1| hypothetical protein GCWU000342_01143 [Shuttleworthia satelles DSM 14600] Length = 654 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 181/650 (27%), Positives = 299/650 (46%), Gaps = 62/650 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I LS++ I++I+AGE+IERP+ +KEL EN++DA ++ + I GG + ++TDNG G Sbjct: 6 IALLSQETIDKISAGEVIERPASVVKELTENAIDAGATAISVEIKEGGIDYIRVTDNGCG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+I +A H TSKI +D IH GFRGEAL SI AVS + L+S+ ++ TG++ Sbjct: 66 IPREQISLAFLPHSTSKIRSSEDLLAIHLLGFRGEALSSIAAVSRVELISKTSESLTGSR 125 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G K S+ + GT VR LFF PAR FL++ E N I+D++ R+A+++P Sbjct: 126 YVIEGAKEISLTEIGAPDGTTFIVRQLFFNTPARRKFLRTAATEGNYISDIMERLALSHP 185 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF F + + + G+ + I Q+ G + + + + TL+G+ G P Sbjct: 186 GISFRFISNGKQKM---ATAGKGSLKDAIYQIYGRSVAMDLLPVRCERETYTLEGFIGKP 242 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + RGN + FINGR V+ + + + Y + +YP VL L VDVNVH Sbjct: 243 SLTRGNRSFENFFINGRYVRSQLLSKALEEGYKGYMMQHQYPFCVLELTFPDGSVDVNVH 302 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +RF + + + ++ + + + ++ + + + +A + Sbjct: 303 PTKMEVRFDDADEVYAGLASAVSQRLLMREDISNIPIQSQKPARTPAPSAKAAGAEPFER 362 Query: 361 SL--------------TNTQEKLFLQENRLS-------------TNDLLPSDDPTYSEDN 393 S + EK + + S +D+ DD T + + Sbjct: 363 SRLEEIRRQIMDDIKNDSPYEKQYDRPISASHTDDASRKDKGIHEDDVSCKDDGTSTGLS 422 Query: 394 DPV-----EESEATHYQLGIA------------------------CAQIHQNYIISQTTD 424 D EE L Q+ Y I Q D Sbjct: 423 DQKKRKLREEPSGREMNLSERAKKGFGDYTQPKFFSQEARESFTIVGQVFGTYWIIQYAD 482 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 + I+DQHAAHE++++E+ ++TSQ L P I+ L E + +R+G Sbjct: 483 KMYIIDQHAAHEKVLYERTMAQLKDKEMTSQLLSPPIIVSLSPLEQEAYDRCSDAFYRIG 542 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 + E FG AI+ P L + + L D+I + D + + +E + A+M+C Sbjct: 543 FRLEPFGGKEYAIKGGPGNLFQIDARTLFLDMIAQACDFKANASSELVMEKV-ASMSCKA 601 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ K+ E+ L+ E+ N C HGRPT I D+++ F R Sbjct: 602 AVKGNSKLSLAEIKELIAELLTLENPYHCPHGRPTIISFSHYDLDRKFKR 651 >gi|296111737|ref|YP_003622119.1| DNA mismatch repair protein [Leuconostoc kimchii IMSNU 11154] gi|295833269|gb|ADG41150.1| DNA mismatch repair protein [Leuconostoc kimchii IMSNU 11154] Length = 659 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 181/645 (28%), Positives = 311/645 (48%), Gaps = 56/645 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS + NQIAAGE+IERP+ +KEL+EN++D+ ++++E V+ G++ ++ DNG Sbjct: 3 KIHELSNLLANQIAAGEVIERPASVVKELVENAIDSGATQIEVVVEDAGEALIRVVDNGA 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A RH TSKI D D NI + GFRGEALPSI A++ +TL + G Sbjct: 63 GIDPEDVPLAFTRHATSKIVDRHDLFNIMSLGFRGEALPSIAAIADVTLNTTTHDAPEGL 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I G K S P GT+V VRDLF+ PARL +LK Q E + I D++ R+A++Y Sbjct: 123 MYHIKGGKQVSATPANGRFGTVVSVRDLFYNTPARLKYLKRPQTELSKIADIMNRLALSY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++FT + + + NGN + I+ + G + + + + ++ + GY + Sbjct: 183 TNIAFTITADGR---VLLKTTGNGNQQQVIAAIYGRESAQKMLSIAGEDDDFNITGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P RG+ + +NGR +++ + + + Y + +GR+P+ V+ + DP +DVNV Sbjct: 240 PELTRGSREYLTILVNGRFIKNFTVSNAVIHGYGSKLMVGRFPMGVVNINTDPLLIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP KS IR T + I+++IQ+ + ++ + + + Q P P Sbjct: 300 HPQKSEIRLSKETELSALIVKTIQERLAEENLIPDAYENLYGKKQVSQTTRPTQTAPWVQ 359 Query: 360 TSLT------------------------------NTQEKLFLQ----------------- 372 +++ NT + F + Sbjct: 360 KNVSEVGQARPNVTTNTGSDIAGISITKRTQLSQNTVQDFFNKYTNEATLPVFNDLEQDM 419 Query: 373 ---ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 ++T DD ++ V + + + Q+H ++ +Q+ D L ++ Sbjct: 420 AQVTEPVTTYQSSVYDDVVAQQETLDVIPDKPSGFPELSYIGQMHGTFLFAQSADSLFLI 479 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQHAA ER+ +E RQ Q LL P I+ + I +H+++L +G+ + Sbjct: 480 DQHAAQERINYEYYRQKIGEVSADKQRLLVPITINYTASDMLKIADHEQELVDVGLAVTQ 539 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 FGP + IRE P + +R++ID I+ + T+ E M+C +I++ Sbjct: 540 FGPTTVIIREHPTWFETGQEEETIREMIDWILRDG-SLTVAKFRERAAIMMSCKRAIKAN 598 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + LL+ + N C HGRP +L L+++EK+F R Sbjct: 599 MHLSDSQAKALLQSLSLAKNPYNCPHGRPVLTQLTLTEMEKMFKR 643 >gi|302023154|ref|ZP_07248365.1| DNA mismatch repair protein [Streptococcus suis 05HAS68] Length = 645 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 177/632 (28%), Positives = 304/632 (48%), Gaps = 44/632 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+ENS+DA +S++E + G QITDNG G Sbjct: 4 IIELPEILANQIAAGEVIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDNGEG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI D I T GFRGEALPSI +VSH+ + + + G Sbjct: 64 IAPDEVALALRRHATSKIKNQSDLFRIRTLGFRGEALPSIASVSHMIIETATADSAHGLH 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G I PV+ GT + V DLF+ PARL +++S+Q E + I DV+ R+++A+P Sbjct: 124 LEAKGGVIEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHIVDVVNRLSLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++F ++ + G + IS + G VE+ + + + GY +P Sbjct: 184 EMAFALVNEGR---ELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEDLDFQISGYVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ +EIDP DVNVH Sbjct: 241 ELTRANRNYISIFINGRYIKNFLLNRAILEGYGSKLMVGRFPLAVISIEIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + I ++I +A+ ++ + ++ + S+ + A + LP Sbjct: 301 PTKQEVRISKEKELMTLIREAISQALKEQDLIPDALENLAQSSTRPKVKAEQGTLPLREP 360 Query: 361 -----------------------------------SLTNTQEKLFLQENRLSTNDLLPSD 385 N + E + ++ Sbjct: 361 KIYYDTIKQDFFLKPDVVAEDVKPLEEDRQEIVESPAENKPTSVQFAERQSVESEDQEHP 420 Query: 386 DPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 + + E D ++ + + Q+H Y+ +Q GL I+DQHAA ER+ +E Sbjct: 421 NLSAKELAKLADKLDREATSTFPELEYFGQMHGTYLFAQGKTGLYIIDQHAAQERVKYEY 480 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 R+ ++Q LL P I + + + ++ + L ++G+ E +G N +RE P Sbjct: 481 YREKIGQVDNSAQQLLVPYIFEFPQNDALDLVHKMDALRQVGVNLEEYGSNQFILREHPI 540 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 + ++ I + ++ D ++ + +++ + M+C SI++ + LLR Sbjct: 541 WMKEEAIESGIYEMCDMLLLTDQV-SIKQYRAELAIMMSCKRSIKANHALDDYSARDLLR 599 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ N C HGRP + SD+EK+F R Sbjct: 600 QLSYCQNPYNCPHGRPVLVHFSKSDMEKMFRR 631 >gi|331269501|ref|YP_004395993.1| DNA mismatch repair protein hexb [Clostridium botulinum BKT015925] gi|329126051|gb|AEB75996.1| DNA mismatch repair protein hexb [Clostridium botulinum BKT015925] Length = 643 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 199/643 (30%), Positives = 331/643 (51%), Gaps = 54/643 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LSE+ N+IAAGE++ERP+ +KEL+ENS+DA S + I GK +ITD+G Sbjct: 3 RINLLSEETSNKIAAGEVVERPASVVKELVENSIDASSQNITIEIKESGKEEIKITDDGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A H TSKIS +D +I+TFGFRGEALPSI AVS++ L +R ++ G Sbjct: 63 GIHPEDVEKAFMPHGTSKISLIEDLYSINTFGFRGEALPSIAAVSNVLLKTRTKDSDFGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++++SG K++ V+ N GT++EV+DLFF +PAR FLKS++ E+ LI+++I R+A+A Sbjct: 123 ELSMSGGKVNYVKDTGCNIGTVIEVKDLFFNVPAREKFLKSDKRESGLISNIINRLALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 +SF + + + + I + G++ N + + S+ +++ GY G Sbjct: 183 HNISFKYYNNDKRSLITFA---SEDAKDTIRAIYGKNIYENIISFEKYSDIVSVYGYIGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 +RG+ N +F+N R ++ I + + A+ + ++P VL L+I P +DVNV Sbjct: 240 SKISRGSRNNQSIFVNKRYIKSGIITAAVENAFKSFSTVNKFPFFVLFLDIYPEFLDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP-------- 351 HP KS ++F++ II + ++ A++ + S+ ++ S P Sbjct: 300 HPTKSEVKFQDERIIYKVVFDAVHSALSDSVRKSFSIEFQEEDSEPTPVQIPIDLKDKEI 359 Query: 352 KTHLPKYATSLTN----------------------------------TQEKLFLQENR-- 375 K+ + SL N +E FL+EN Sbjct: 360 KSVINDLERSLNNLNDTKLNNDCNNINNQLINKDTFTNINEKEYNKYDKEDTFLKENTNI 419 Query: 376 LSTNDLLPSDDPTYSEDNDPVEESEATH----YQLGIACAQIHQNYIISQTTDGLVIVDQ 431 + + +N+ E+SE + Q ++ YI++QT D ++DQ Sbjct: 420 SKYTTYKIDTNCKTTNNNESKEQSETLEQIAKFPKLNVIGQFNKTYILAQTLDVFYMIDQ 479 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 HAAHE+++FEK R + + SQ LLTP +I++ + A ++ G E FG Sbjct: 480 HAAHEKILFEKFRNQIKNRDVISQILLTPVVIEMSAEDFAYYSDNKNIFEESGFSVELFG 539 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRK 551 N I+IRE P +L K + +I+D+I + +++ N++A++AC +I++ Sbjct: 540 DNTISIREAPMLLGKVSTKDFFLEILDDIKNMGNG-NIEEVKHNMIASLACKAAIKANHS 598 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + EM+ L+ E+ C HGRPT IK L +IEK F R Sbjct: 599 LSYEEMSSLVEELRYIEEPFNCPHGRPTIIKSSLKEIEKKFKR 641 >gi|304385249|ref|ZP_07367594.1| DNA mismatch repair protein MutL [Pediococcus acidilactici DSM 20284] gi|304328456|gb|EFL95677.1| DNA mismatch repair protein MutL [Pediococcus acidilactici DSM 20284] Length = 640 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 179/629 (28%), Positives = 303/629 (48%), Gaps = 41/629 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LS+ + +QIAAGE++ERP+ +KEL+EN++DA SSR++ ++A G ++ DNG Sbjct: 3 KIQELSDILADQIAAGEVVERPASVVKELVENAIDAGSSRIDILLAESGLKMIRVIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ A +RH TSKI+ D + T GFRGEALPSI +++ + + S + G Sbjct: 63 GIEGSQVETAFKRHATSKITSRADLFRVGTLGFRGEALPSIASIADVKMTSSTAEGP-GQ 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G ++ R GT + V DLFF PARL +LKS E + ITD+I R+A++Y Sbjct: 122 FVHYRGGELIEHREAQSRQGTDITVSDLFFNTPARLKYLKSLATELSKITDIINRIALSY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++F+ + ++ S GN + ++ + G ++++ +S + + GY + Sbjct: 182 PEIAFSLQNDER---QLMRTSGQGNVQQVLANIYGTHNAQKMLDIHGESVDFRIDGYVSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F R N + + +NGR +++ I I Y + +GRYPV V+ ++ DP VDVNV Sbjct: 239 PEFTRANRSYITILVNGRYIKNFHISKAIIEGYGSKLMVGRYPVAVINIQTDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV----------------------- 336 HP+K +R + I ++I + + + +V Sbjct: 299 HPSKLEVRISEENTLTELISKTIFDRLADQNLIPDAVDNLKKKRISKPAGEQLDLTETVL 358 Query: 337 -------LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + + D+A H AT + LQ +R++ +D T Sbjct: 359 SGSFGKPTPTESAAVEEDDSAAALHPSVAATKPIIISTRQDLQSDRIAEFKEKYADSTTP 418 Query: 390 SEDNDPVEESEAT----HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 N+ E E T + Q+H Y+ ++ DGL I+DQHAA ER+ +E R Sbjct: 419 VTKNENTEGEEKTPSTSRFPALTYIGQMHGTYLFAEADDGLYIIDQHAAQERINYEYYRV 478 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 Q LL P +D + I E L G+ E FG N +R P Sbjct: 479 QIGQVSDDQQDLLVPIYLDYSTTDTLRIKEKQSVLEACGLYLEEFGRNTFIVRHHPTWFK 538 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 K +++++D +++ T+ E M+C +I++ + ++ +LL+++ Sbjct: 539 KGQEEDTVKEMVDYVLNDRN-MTVAKFREATAIMMSCKRAIKANHHLDDLQAKQLLKDLA 597 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 K N C HGRP + +D+EK+F R Sbjct: 598 KVENPFNCPHGRPVLVHFSTTDMEKMFKR 626 >gi|190570725|ref|YP_001975083.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190356997|emb|CAQ54386.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 602 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 227/611 (37%), Positives = 349/611 (57%), Gaps = 27/611 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L K IN+IAAGE+IERP+ +KEL+EN++DA SS +E I GG++ +TDNG Sbjct: 1 MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSSEIEIKIESGGRNLITVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A RH TSK+SD + I GFRGEALPSI AVS + L S+ Sbjct: 61 NGIEKEDLELAFMRHATSKLSDGELIEIRHLGFRGEALPSIAAVSRMKLSSKASGAKEAW 120 Query: 120 QIAISG-EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I G EK+ + P ++ GT +EVRDLFF P RL FLK+E+ ET I D++ +A+ Sbjct: 121 SIRYEGGEKVREITPCSLLQGTYIEVRDLFFATPNRLKFLKTERAETQSIVDIVNNLAMI 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + FT ++ K Q++ N I ++F +N++E+ E+ I L+G+ Sbjct: 181 NYSIGFTLTSGNKKLLKYVKQTSLFNRLCEIE----KEFQSNSLEVKEEEEGIKLKGHIC 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P NRGN+ Q Y F+NGR ++D ++ IR AY + IP RYP VL LE+ QVDVN Sbjct: 237 KPNVNRGNSTQIYTFVNGRPMKDNLLVGAIRYAYHDFIPNNRYPFAVLHLEVPYDQVDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI-----SSFHQDNAPKT 353 VHP KS +RF+N +I + + I K ++ + + + +++I S D+ K Sbjct: 297 VHPNKSEVRFQNKRLIYEIVRRGIIKTLSTRFAAGDQGIEEELIFNDSKSQEQIDSQEKK 356 Query: 354 HLPKYATSLTNTQEKLFLQE------NRLSTNDLLPSDDPTYSEDNDPVEESEAT---HY 404 ++ + E ++E R S + + + +E + + Sbjct: 357 DQKEFYEKRPSLLENRLMKEFNAPDERRQSLPETFKYGESPPQKGTMVLERKQIDLIADH 416 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 LG A Q++ YII++ L+IVDQHAAHERLI+E + T I Q L PE ++ Sbjct: 417 PLGYARCQVYNTYIIAEAKGKLIIVDQHAAHERLIYECL------TSIKRQKFLLPETVE 470 Query: 465 L-LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 + + ++ + + L +G E + + ++EIPAIL N+ +++ +I+D +++ Sbjct: 471 IKNQAGMEMVGMYKDRLFEMGFGIEIESEDKVRVKEIPAILGTINVKEMVMNIVDRLMEI 530 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 T +++++ ILAT+AC+GSIR+GR M+ EMN L+R+ME+ P + QCNHGRPT+I++ Sbjct: 531 GDTLPIEEKVNKILATIACHGSIRAGRAMKLEEMNELMRQMEETPYAGQCNHGRPTYIEM 590 Query: 584 KLSDIEKLFGR 594 KLSDIEKLF R Sbjct: 591 KLSDIEKLFER 601 >gi|190571443|ref|YP_001975801.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018841|ref|ZP_03334649.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357715|emb|CAQ55164.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995792|gb|EEB56432.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 609 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 239/615 (38%), Positives = 356/615 (57%), Gaps = 28/615 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L K IN+IAAGE+IERP+ +KEL+EN++DA SS +E I GG++ + D+G Sbjct: 1 MAIVLLDTKTINRIAAGEVIERPASVVKELVENAIDARSSEIEIKIESGGRNLITVIDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSK+SD + I GFRGEALPSI AVS + L S+ + + Sbjct: 61 SGVKKDDLELAFMRHATSKLSDSELIEIKHLGFRGEALPSIAAVSRIKLSSKASKADQAW 120 Query: 120 QIAISG-EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I G EKI + P ++ GT +EVRDLFF P RL FLK+E+ ET I D++ +A+ Sbjct: 121 SIRYEGGEKIGELVPYPLSIGTYIEVRDLFFATPNRLKFLKTERAETQSIVDIVNNLAMI 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + FT + K+ + + R+ +V E+F N+++++E+ + I L GY Sbjct: 181 NYGIEFTLISDNK---KLLKYAKQNSLFSRLCEV-EEEFHENSLQISEEEDGIRLTGYIC 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 PT NR N+ Q Y F+NGR ++D ++ IR AY + IP RYP L LEI QVDVN Sbjct: 237 KPTVNRSNSTQIYTFVNGRPIKDNLLIGAIRYAYHDLIPSNRYPFAALHLEIPYDQVDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP-- 356 VHP KS +RF+N +I + + + K ++K+ +VL++ ++ H + P + Sbjct: 297 VHPNKSEVRFQNKRLIYEIVRRGLIKVLSKRIDLAETVLAQNGTTTNHLSSDPFSRSSLK 356 Query: 357 -----KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA---------- 401 + + N + F N + + S Y+ +E Sbjct: 357 NEFYGRRSDPFENQLMRKFTSPNIETKSLSEHSKSFDYTGMQKSPPRAETTILERKQTDL 416 Query: 402 -THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 Y LG A QI+ YII++ D L+IVDQHAAHERL++E ++ + I Q LL P Sbjct: 417 IRDYPLGFAHCQIYNTYIIAEVRDKLIIVDQHAAHERLVYECLK---EKSSIKRQKLLLP 473 Query: 461 EIIDL-LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 E++++ + +I + + L +G E NAI ++EIPAIL ++ ++L DI+D Sbjct: 474 EMVEIKSQAGMEMIEVYKDKLFEMGFDIEIKSENAIIVKEIPAILGSIDVKKMLIDIVDR 533 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 +I+ T ++D+I ILAT+AC+GSIR+GRKM+ EMN LLR++EK P S QCNHGRPT Sbjct: 534 LIEIEDTLPIEDKINKILATIACHGSIRAGRKMKLEEMNELLRQIEKTPYSGQCNHGRPT 593 Query: 580 FIKLKLSDIEKLFGR 594 +I++KLSDIEKLF R Sbjct: 594 YIEMKLSDIEKLFER 608 >gi|319940113|ref|ZP_08014467.1| DNA mismatch repair protein mutL [Streptococcus anginosus 1_2_62CV] gi|319810827|gb|EFW07154.1| DNA mismatch repair protein mutL [Streptococcus anginosus 1_2_62CV] Length = 648 Score = 498 bits (1282), Expect = e-138, Method: Composition-based stats. Identities = 181/636 (28%), Positives = 295/636 (46%), Gaps = 47/636 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERPS +KELIENS+DA ++++ I G Q+ DNG Sbjct: 3 KIIELPENLANQIAAGEVIERPSSVVKELIENSIDAGATQIIVEIEEAGLRSIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+ +A++RH TSKI D I T GFRGEALPSI +VS LT+ + G Sbjct: 63 GIEHEEVSLALRRHATSKIKKQADLFRIRTLGFRGEALPSIASVSRLTIETATSSGAHGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G ++ ++ P + GT ++V DLFF PARL ++KS+Q E + I DVI R+++A+ Sbjct: 123 LLIAQGGEVETLEPSSCPRGTKIKVEDLFFNTPARLKYMKSQQAELSHIVDVINRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + GN + I+ + G +E+ + + GY + Sbjct: 183 PEVAFTLVNDGKEMTR---TAGTGNLRQAIAGIYGLTTAKKMIEILASDLDFEVSGYISL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+ V+ + IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIAVIDIRIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---------------------- 337 HP K +R + I Q+I ++ ++ + ++ Sbjct: 300 HPTKQEVRISKERELMVLISQAIAASLKEQDLIPDALENLAKSTINRAIKPEQTSLPLKE 359 Query: 338 ----SKKMISSFHQDNAPKTHLPKYATSLTNTQEKL-------------FLQENRLSTND 380 K + F P + S Q+ F + S N Sbjct: 360 NRLYYDKERNDFFVKPQVSEAQPSFEESARLDQQSADTDELNSKAASVKFAERQSPSYNQ 419 Query: 381 LLPS--DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L D + D + E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 LDHPELDQASLERALDKLNGEETSTFPELEYFGQMHGTYLFAQGNGGLYIIDQHAAQERV 479 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E R+ + Q LL P I + + + + L +G+ E +G N +R Sbjct: 480 KYEYYREKIGDVDASQQQLLVPYIFEFPADDMLRLKQRMTLLEEVGVFLEEYGTNQFILR 539 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P L ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 540 EHPIWLKEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHSLDDYSAR 598 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L+ ++ + N C HGRP + SD+ K+F R Sbjct: 599 DLIFQLSQCDNPYNCPHGRPVLVNFTKSDMGKMFRR 634 >gi|168186344|ref|ZP_02620979.1| DNA mismatch repair protein hexb [Clostridium botulinum C str. Eklund] gi|169295821|gb|EDS77954.1| DNA mismatch repair protein hexb [Clostridium botulinum C str. Eklund] Length = 647 Score = 498 bits (1282), Expect = e-138, Method: Composition-based stats. Identities = 197/647 (30%), Positives = 338/647 (52%), Gaps = 58/647 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++ LSE+ N+IAAGE++ERP+ +KEL+ENS+DA + + + GK +I+D+G Sbjct: 3 RVNLLSEETSNKIAAGEVVERPASVVKELVENSIDANAKNITIEVKESGKESIKISDDGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A H TSKIS +D +I+TFGFRGEALPSI AVS++ L S+ ++ G Sbjct: 63 GIHPDDVEKAFMPHGTSKISLIEDLYSINTFGFRGEALPSIAAVSNVLLKSKTMDSDFGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ISG +I+ ++ A N GT++ V DLFF +PAR FLKS++ E++LI++++ R+A+A Sbjct: 123 ELSISGGRINHIKDTACNVGTVISVEDLFFNVPAREKFLKSDRRESSLISNIVNRLALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 +SF + T S + I + G++ N + E S+ +++ GY G Sbjct: 183 NNISFKYYTNNKKTLMTYASS---DVKNTIRSIYGKNIYENIISFEEHSDIVSVYGYIGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 +RG+ N +F+N R ++ I + + A+ + ++P VL ++I P +DVNV Sbjct: 240 SEISRGSRNNQSIFVNKRYIKSGTITAAVENAFKSFSTVNKFPFFVLFVDIYPEFIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN-----KKGISTSSVLSKKMIS-SFHQDNAPKT 353 HP KS ++F++ II + ++ A++ I+ +S+ K + QD PK Sbjct: 300 HPTKSEVKFQDERIIYKVVFDAVHSALSTSIKDSFNINKNSIFDNKDTNYKLMQDEVPKQ 359 Query: 354 -------------------HLPKYATSLTNTQEKLFLQEN-------------RLSTNDL 381 LPK+ +++ + K +EN L T ++ Sbjct: 360 EQVEIPIDLQNKRSASIIESLPKFKPNVSYEEPKDSCRENCFKNRDIKFNNTEELETPNI 419 Query: 382 LPSDDPTYSEDNDPVEESEATH--------------YQLGIACAQIHQNYIISQTTDGLV 427 + + S ++ + E + + Q ++ YI+++++D Sbjct: 420 NYENFMSASTTDNIICEKPQSKSTKATDTCTALESKFPRLNILGQFNKTYILAESSDTFY 479 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 ++DQHAAHE+++FEK + + ++ SQ LLTP II++ + E+ H G Sbjct: 480 MIDQHAAHEKILFEKFKNQIENREVVSQILLTPVIIEMNAEDFVYYSENINIFHESGFVT 539 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR 547 E FG N I IRE P +L K N +I+D+I + + + N++A++AC +I+ Sbjct: 540 EIFGDNIINIREAPMLLGKVNTKDFFLEILDDIKNMGNGNIAKVK-HNMIASLACKAAIK 598 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + EMN L+ ++ C HGRPT IKL L +IEK F R Sbjct: 599 ANHTLSYEEMNSLVEDLRYIEEPFNCPHGRPTIIKLTLKEIEKKFKR 645 >gi|171913433|ref|ZP_02928903.1| DNA mismatch repair protein MutL [Verrucomicrobium spinosum DSM 4136] Length = 645 Score = 498 bits (1282), Expect = e-138, Method: Composition-based stats. Identities = 195/643 (30%), Positives = 326/643 (50%), Gaps = 53/643 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR LS+ + +Q+AAGE++ERP+ ++EL+ENSLDA +S VE + GG + ++TDNG Sbjct: 3 KIRILSDALASQVAAGEVVERPAAVVRELVENSLDAGASHVEVHVQRGGTALIRVTDNGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ + ++RH TSKI +D + I TFGFRGEA+PSI +VS L SR P+ +G Sbjct: 63 GMDREDALLCLERHATSKIRTKEDLAAIRTFGFRGEAMPSIASVSRFRLASRQPEALSGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G K+ SV+ PGT+VE R LFF IPAR FL+SEQ E + + R AIA Sbjct: 123 EVEIQGGKMVSVKDYGGAPGTVVEARSLFFNIPARRKFLRSEQTEFSHVEQQFRLHAIAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE-LNEKSNEITLQGYTG 238 V+FT + + + RI + G + +E + N +T+ G+ Sbjct: 183 AHVAFTLVRDGDVLFHLPA---TQDLRHRIEGLSGRETARRLIEVQSFTLNGVTVSGFIS 239 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P +R N F+NGR V + +R Y ++ G++P+ L L + P D+N Sbjct: 240 GPGVSRPNRQMQLTFLNGRPVDSATVNFGLREGYHTSLMKGQHPITFLFLTMAPEAFDIN 299 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-----------------------SS 335 VHPAK +RF + +R ++Q++ +A+ + Sbjct: 300 VHPAKKEVRFHDGHGVREAVVQAVSRALAGSAEISTGHMPIGAQRAAQPTRQQVLEQMPP 359 Query: 336 VLSKKMISSFHQDNAP----KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 ++ + S +D A P ++ + + + +T PSD P +S Sbjct: 360 LIPESEQRSLRRDWAELPQRTPSPPGHSPAPAPRTQDFGSRPQPFATTAPAPSDAPVHSS 419 Query: 392 DNDPVEESEATHY--------------------QLGIACAQIHQNYIISQTTDGLVIVDQ 431 +P E + +H+ Y++ ++++GLV++DQ Sbjct: 420 STEPAEIPSPEYPASQTPSPAPPPPGAPSEVSADSFRILGVLHKLYVLMESSEGLVLMDQ 479 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 HAAHER++FE+MR + SQ LL P +++ + ++ LH+LG++AE FG Sbjct: 480 HAAHERVLFEQMRNAMEQQGVPSQRLLLPLTLEVSPRDFDMMSRSLPTLHKLGVEAEPFG 539 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRK 551 NA + +PA + + LLRDI++E+ +S+ + E+++AT C ++++ Sbjct: 540 ANAFKVDAMPAFIRTDDPLALLRDIMEELASASSRTSSLRLGEDMIATTVCRHAVKANDD 599 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ E+ +LL+++ C HGRPT I++ +++E+ FGR Sbjct: 600 LREPELRKLLQDLFTCEMPYCCPHGRPTLIQISFAELERKFGR 642 >gi|119356019|ref|YP_910663.1| DNA mismatch repair protein MutL [Chlorobium phaeobacteroides DSM 266] gi|166232082|sp|A1BCW2|MUTL_CHLPD RecName: Full=DNA mismatch repair protein mutL gi|119353368|gb|ABL64239.1| DNA mismatch repair protein MutL [Chlorobium phaeobacteroides DSM 266] Length = 624 Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 178/626 (28%), Positives = 306/626 (48%), Gaps = 38/626 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + + N+I+AGE+++RP+ IKEL+EN++DA +S++ I GK QI DNG Sbjct: 3 KIARLPDNVANKISAGEVVQRPASVIKELLENAIDACASKITVTIKDAGKELVQIVDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ ++ ++V+R TSKIS +D ++ + GFRGEALPSI +VS L ++P G Sbjct: 63 GMSRQDALLSVERFATSKISGVEDLDSLMSLGFRGEALPSIASVSQFELKTKPEGALLGF 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G + V GT + VR+LF+ +PAR FLKS E I + ++ +A+AY Sbjct: 123 RFRCDGGEPVEESEVNAEKGTTITVRNLFYNVPARRKFLKSNATEFRHIFESVKSLALAY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + + + + ER+ GE+F + + ++E+++ +++ G+ G Sbjct: 183 PEIEWKMVSDDEELFHFRTP----DIYERLDAFYGENFSLSLIPVSEENDYLSISGFLGK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + Y+++N R +Q++ + ++ AY E + + P +L L IDP ++DVNV Sbjct: 239 PGMQKRQKLDQYIYVNRRIIQNRMLSQALQQAYGELLVERQAPFALLFLGIDPSRIDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK------------------- 340 HPAK ++F + +R I++ I S + + Sbjct: 299 HPAKLEVKFEDERSVRTMFYPVIKRTIQLHDFSPDAAEKEPCSIKEGTLDCSSRKLGFQD 358 Query: 341 ----------MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + +++ Q T + A + + DL D + Sbjct: 359 IAEPASTTSTLYANYRQGAFGDTPFERPAYAEKEPRPSSINTGFERFEPDLREGGDLFST 418 Query: 391 EDN--DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 +++ + Q+H YII Q G++I+DQH AHER+++E+ N Sbjct: 419 TLQARPYEDDNTPDPGENDPKIWQLHNKYIICQIKTGMMIIDQHVAHERVLYERAVDVMN 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 SQ LL P+ I+L E + E +DL+RLG FG + I IP + Sbjct: 479 QNVPNSQQLLFPQKIELRAWEYEVFEEIRDDLYRLGFNLRSFGAKTVMIEGIPQDVRPGT 538 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 +L+D+I E ++S+ L+ R EN+ + +C +I +G+K+ EM L+ + Sbjct: 539 EVTILQDMITEFQENSSKLKLE-RRENLARSYSCRNAIMAGQKLSLEEMRSLIDNLFATR 597 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP IKL L ++++FGR Sbjct: 598 VPYTCPHGRPVIIKLSLDQLDRMFGR 623 >gi|270290978|ref|ZP_06197201.1| DNA mismatch repair protein mutL [Pediococcus acidilactici 7_4] gi|270280374|gb|EFA26209.1| DNA mismatch repair protein mutL [Pediococcus acidilactici 7_4] Length = 640 Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 178/629 (28%), Positives = 302/629 (48%), Gaps = 41/629 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LS+ + +QIAAGE++ERP+ +KEL+EN++DA SSR++ ++A G ++ DNG Sbjct: 3 KIQELSDILADQIAAGEVVERPASVVKELVENAIDAGSSRIDILLAESGLKMIRVIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ A +RH TSKI+ D + T GFRGEALPSI +++ + + S + G Sbjct: 63 GIEGSQVETAFKRHATSKITSRADLFRVGTLGFRGEALPSIASIADVKMTSSTAEGP-GQ 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G ++ R GT + V DLFF PARL +LKS E + ITD+I R+A++Y Sbjct: 122 FVHYRGGELIEHREAQSRQGTDITVSDLFFNTPARLKYLKSLATELSKITDIINRIALSY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++F+ + ++ S GN + ++ + G ++++ +S + + GY + Sbjct: 182 PEIAFSLQNDER---QLMRTSGQGNVQQVLANIYGTHNAQKMLDIHGESVDFRIDGYVSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F R N + + +NGR +++ I I Y + +GRYPV V+ ++ DP VDVNV Sbjct: 239 PEFTRANRSYITILVNGRYIKNFHISKAIIEGYGSKLMVGRYPVAVINIQTDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV----------------------- 336 HP+K +R + I ++I + + + +V Sbjct: 299 HPSKLEVRISEENTLTELISKTIFDRLADQNLIPDAVDNLKKKRISKPAGEQLDLTETVL 358 Query: 337 -------LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + + D+ H AT + LQ +R++ +D T Sbjct: 359 SGSFGKPTPTESAAVEEDDSTAALHPSVAATKPIIISTRQDLQSDRIAEFKEKYADSTTP 418 Query: 390 SEDNDPVEESEAT----HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 N+ E E T + Q+H Y+ ++ DGL I+DQHAA ER+ +E R Sbjct: 419 VTKNENTEGEEKTPSTSRFPALTYIGQMHGTYLFAEADDGLYIIDQHAAQERINYEYYRV 478 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 Q LL P +D + I E L G+ E FG N +R P Sbjct: 479 QIGQVSDDQQDLLVPIYLDYSTTDTLRIKEKQSVLEACGLYLEEFGRNTFIVRHHPTWFK 538 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 K +++++D +++ T+ E M+C +I++ + ++ +LL+++ Sbjct: 539 KGQEEDTVKEMVDYVLNDRN-MTVAKFREATAIMMSCKRAIKANHHLDDLQAKQLLKDLA 597 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 K N C HGRP + +D+EK+F R Sbjct: 598 KVENPFNCPHGRPVLVHFSTTDMEKMFKR 626 >gi|167754511|ref|ZP_02426638.1| hypothetical protein CLORAM_00012 [Clostridium ramosum DSM 1402] gi|167705343|gb|EDS19922.1| hypothetical protein CLORAM_00012 [Clostridium ramosum DSM 1402] Length = 613 Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 173/612 (28%), Positives = 300/612 (49%), Gaps = 25/612 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR+L + + N+IAAGE+IERP+ +KEL+ENS+DA S++++ +I GG + QI DNG Sbjct: 6 KIRQLDDVLANKIAAGEVIERPANVVKELVENSIDANSTKIDVIIEEGGLNLIQIIDNGE 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ + RH TSKI D D I T GFRGEA+PSI ++S+ L + TG Sbjct: 66 GMVKEDALLCFSRHATSKIKDDQDLFCIQTLGFRGEAIPSIASISNFEL--KTSTGGTGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + GT ++V LF +PARL ++KS E I + R+++++ Sbjct: 124 TVTYEYGRFVECNESDSKKGTNIKVEKLFQNVPARLKYIKSTNAEFANIQTYLERLSLSH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F YK N NGN E IS + G + + ++ + +E + GY Sbjct: 184 PHIAFMLVHNGRTIYKTN---GNGNLLEVISNIYGLNVAKAMIPVDFEDDEFHVTGYVSK 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 NR + N +N R V++K + +I AY + RYP+ ++ +EIDP VDVNV Sbjct: 241 IDVNRASKNHMVTMVNSRVVKNKVSVDSINNAYRRYLADKRYPIAIVNIEIDPYLVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK------- 352 HP+K +RF + +R I Q + A+ K ++ + K + P Sbjct: 301 HPSKLEVRFSKESQLRELIYQGVSDALAKVNLTYDATAEYKKTKAPLNLEQPSLDLTYES 360 Query: 353 -----THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-----EAT 402 P++ +++ ++ + + Y + + E+ E Sbjct: 361 VPIKTIEQPRFEADFPQNDQEVVFKDASFDDFTFVKEETSEYIIPDQQIIETKVEPREKL 420 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + Q+H YII + G+ IVDQHA ER+ +E + + + ++ + LL P Sbjct: 421 MKKKLFVKGQVHGTYIICEDETGMYIVDQHAGQERINYEYFLEKYQNLDLSMRDLLVPIT 480 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 ++ E +I E + L ++GI E FG + I+++P + + + D++ ++++ Sbjct: 481 LEYPLSEFLIIEERKDLLTKVGINLEVFGNSGYVIKQLPLWMQNIDEQVFIEDMMMQLLN 540 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 + ++ ++ +AT++C S+++ + + M ++ + + N C HGRPT I Sbjct: 541 DNKIDVIK-LQDHAIATLSCKASLKANTHLSTEGMQNIIDNLMRCDNPYVCPHGRPTIIY 599 Query: 583 LKLSDIEKLFGR 594 +IEKLF R Sbjct: 600 YSTYEIEKLFKR 611 >gi|296875590|ref|ZP_06899661.1| DNA mismatch repair protein HexB [Streptococcus parasanguinis ATCC 15912] gi|296433387|gb|EFH19163.1| DNA mismatch repair protein HexB [Streptococcus parasanguinis ATCC 15912] Length = 693 Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 182/635 (28%), Positives = 308/635 (48%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L E + NQIAAGE+IERP+ +KEL+ENS+DA +S++ I G +ITDNG Sbjct: 49 QIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIVVEIEEAGLKSIRITDNGE 108 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+ +A++RH TSKI D I T GFRGEA+PSI +VS LTL++ G Sbjct: 109 GIAHDEVALALRRHATSKIKSQADLFRIRTLGFRGEAMPSIASVSILTLLTAQEGAVHGT 168 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G +I V P GT + V DLFF PARL +LKS+Q E + I D++ R+++A+ Sbjct: 169 KLVAKGGEIEEVEPATSPVGTKITVEDLFFNTPARLKYLKSQQAELSHIVDILNRLSLAH 228 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT K + GN + I+ V G V + + + + G+ + Sbjct: 229 PEIAFTLINDGKEMTK---TAGTGNLRQAIAGVYGLASAKKIVAIENRDLDFEVTGFVSL 285 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N +FINGR +++ + I +Y + +GR+P+ ++ ++IDP DVNV Sbjct: 286 PELTRANRNYISLFINGRYIKNFLLNRAILDSYGSKLMVGRFPLAIINIQIDPYLADVNV 345 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I A+ ++ + ++ + + + +T LP Sbjct: 346 HPTKQEVRISKERELMALISQAIANALKEQDLIPDALENLAKSTIRRTEKPVQTTLPLKE 405 Query: 357 ------------KYATSLTNTQEKLFLQ---ENRLSTN---------------------- 379 K + + Q L + E R+ N Sbjct: 406 NRLYYDRESQDFKLRPEVADPQRPLADETATEARIQENPVEKPTSAIKFAERKAVVYDEL 465 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 D D + + D ++ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 466 DHPELDLASLDKAYDKLDGEEHSTFPELEYFGQMHGTYLFAQGNGGLYIIDQHAAQERVK 525 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E+ R+ + Q LL P I + + + + L +G+ E +G N + +RE Sbjct: 526 YEEYRESIGDVDGSQQQLLVPYIFEFPADDLIRLQQRKHLLEEVGVYLEEYGANQLILRE 585 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P + ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 586 HPIWMKEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHTLDDYSARD 644 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L+ ++ + N C HGRP + SD+EK+F R Sbjct: 645 LIYQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 679 >gi|189424059|ref|YP_001951236.1| DNA mismatch repair protein [Geobacter lovleyi SZ] gi|238692123|sp|B3E5Z2|MUTL_GEOLS RecName: Full=DNA mismatch repair protein mutL gi|189420318|gb|ACD94716.1| DNA mismatch repair protein MutL [Geobacter lovleyi SZ] Length = 589 Score = 498 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 191/595 (32%), Positives = 309/595 (51%), Gaps = 16/595 (2%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R LSE + N+IAAGE++ERP+ +KELIEN+LDA ++ + I+ GG+ +++DNG GM Sbjct: 6 RILSESLANKIAAGEVVERPASVVKELIENALDAGATDIRLEISAGGRRLIRVSDNGHGM 65 Query: 64 TSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + E+ +A++RH TSKI D I T GFRGEALPSI +VS L L SR + G +I Sbjct: 66 SREDALLALERHATSKIRSDQDLETILTLGFRGEALPSIASVSRLRLKSREAGSIEGTEI 125 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 G + SV M GT + V LFF PARL FL+S + E + D++ RMAI+ P Sbjct: 126 TAEGGTVRSVTACGMAVGTDLTVEQLFFNTPARLKFLRSAETEAAHVGDLMVRMAISRPD 185 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 VSF++ ++ G+ +R+ ++ D ++ ++ + GY P Sbjct: 186 VSFSYYHDGRELLRVVP----GDLRQRLLKLAARD--ATLFPVDGETAAARISGYLAPPA 239 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 R + + +INGR V+DK I I A+ + GRYP+V L +E+ +VDVNVHP Sbjct: 240 AARSTTSAMFTYINGRFVRDKVIQHAIMQAFRPILEKGRYPLVALFIELPAGEVDVNVHP 299 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 K +RFR + + I +++ + S ++ + + A P ++ Sbjct: 300 TKHEVRFRRQAQVHDTIQGVLEEVLRD------SPWLQRREAPQRPEPARPYTTPPPSSH 353 Query: 362 LTNTQEKL--FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 Q L F+ ++ + +P + E + ++ Q YI+ Sbjct: 354 REGVQHALDRFMAATPVAPPRIYEQPEPYRPPEPPAASEPTSGYFSGLSVIGQFRAAYIL 413 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 Q D LVI+DQHAA+ER+ FE+++ F + I SQ LL P+ ++L E + + Sbjct: 414 CQAEDRLVIIDQHAAYERVRFEQLKAGFATGGIESQRLLLPDTLELSFSEADTVRRYLNI 473 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L LG + E FG I +P I+++++ +LLRD++ E+ + + + +LA Sbjct: 474 LEPLGFELEEFGGQTWRINAVPRIVAEQDHCRLLRDLLAELAEQGSNAHFDQLRDELLAR 533 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC+ +R ++ +M LLR M++ S+ C HGRP ++ L ++EK F R Sbjct: 534 VACHSVVRGSHPLERRQMEELLRAMDRTDFSAHCPHGRPVSHEITLRELEKFFNR 588 >gi|308173668|ref|YP_003920373.1| DNA mismatch repair factor [Bacillus amyloliquefaciens DSM 7] gi|307606532|emb|CBI42903.1| DNA mismatch repair factor [Bacillus amyloliquefaciens DSM 7] gi|328553400|gb|AEB23892.1| DNA mismatch repair protein [Bacillus amyloliquefaciens TA208] gi|328911808|gb|AEB63404.1| DNA mismatch repair factor [Bacillus amyloliquefaciens LL3] Length = 625 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 184/626 (29%), Positives = 309/626 (49%), Gaps = 38/626 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K+ +LS+++ N+IAAGE++ERP+ +KEL+EN++DA S+ +E I G S ++ DNG Sbjct: 3 KVIQLSDELSNKIAAGEVVERPASVVKELVENAIDANSTVIEIDIEEAGLSSIRVLDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +E+ A +RH TSKI D D + T GFRGEALPSI +VSHL + + G Sbjct: 63 GMETEDCKRAFRRHATSKIKDENDLFRVRTLGFRGEALPSIASVSHLEIKT-SIGEGAGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + S + + GT + V +LFF PARL ++K+ E ITDV+ R+A+A+ Sbjct: 122 HLILQGGNMISEQRTSSRKGTEIIVTNLFFNTPARLKYMKTVHTELGNITDVVNRIALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + + NG+ ++ + G + L+ S + ++GY + Sbjct: 182 PEVSIRLRHQGK---NLLQTNGNGDVRHVLAAIYGTAVAKKMIPLHVSSLDFEVKGYIAL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ ++ + Y +P+GR+P+ + + +DP VDVNV Sbjct: 239 PEITRASRNYMSSVINGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP-------- 351 HP+K +R T + I I++ K+ + S+ L KK + ++ Sbjct: 299 HPSKLEVRLSKETELHELIRDGIKEVFQKQRLIPSAQLPKKSAPAPIKNEQQFMTFGESE 358 Query: 352 -------KTHLPKYATS--LTNTQEKLFLQENRLSTNDLLPS--------------DDPT 388 KT P Y+ + +E + E N+ D Sbjct: 359 PERKLPEKTPEPSYSPMKLSSVVKEPAPVTEEEFHPNEADHEVPSETSMPEMAAPVSDIP 418 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 E+ EE + + Q+H YI++Q +GL I+DQHAA ER+ +E R+ Sbjct: 419 APEEEAVSEEIQEERVPVMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREKVG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + Q ++ P E +I +H +L +G+ E FG N+ +R PA K Sbjct: 479 QVEPEVQDMIVPLTFHYAANEALIIEQHQHELESVGVFLEAFGTNSYIVRCHPAWFPKGE 538 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 +L+ +II +++D+ ++ E M+C GSI++ R +++ E+ LL ++ + Sbjct: 539 EAELIEEIIQQVLDAKQID-IKKLREEAAIMMSCKGSIKANRHLRNDEIKALLDDLRRTA 597 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP I ++EK+F R Sbjct: 598 DPFTCPHGRPIIIHHSTYEMEKMFKR 623 >gi|259046524|ref|ZP_05736925.1| DNA mismatch repair protein HexB [Granulicatella adiacens ATCC 49175] gi|259036689|gb|EEW37944.1| DNA mismatch repair protein HexB [Granulicatella adiacens ATCC 49175] Length = 636 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 183/626 (29%), Positives = 302/626 (48%), Gaps = 38/626 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I++LS + NQIAAGE+IERPS +KEL+EN++DA S+R+E I G +I DNG Sbjct: 3 TIKELSPLLTNQIAAGEVIERPSSVVKELLENAIDAGSTRIEIEIEESGLRKIRIQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ M+++RH TSK+ + I T GFRGEAL SI AVS +TL + ++G Sbjct: 63 GMTKEDARMSIKRHTTSKLYSPEQLFRIRTLGFRGEALASITAVSKVTLTTST-GEDSGV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I +I + V GT V DLF+ PARL F+++ Q E ITDV+ + ++++ Sbjct: 122 ELKIESGEIKEEKTVPPLKGTTFLVEDLFYNTPARLKFVRTLQTELAHITDVVSKASLSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++F + + S G + ++ IG + + + + + GYT + Sbjct: 182 PEIAFILKNDGNL---LLQTSGKGELLQAVAGNIGPVNARKMLPFSGEDEDFKVSGYTSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N +FINGR +++ I I Y T+ +GR+P+ ++ +E+D + VDVNV Sbjct: 239 PELTRSNRNYLSIFINGRPIRNMAIAKAITLGYGSTLMVGRFPITIISIEMDVQLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT------ 353 HP K +R + I ++I++AI S+ ++ APK Sbjct: 299 HPTKQEVRISKEQELSLVIQKAIREAIQGVQRIPESIEDLSFKRKENRVEAPKPVQQTLE 358 Query: 354 -------------HLPKYATSLTNTQEKLFLQENRLSTNDLLPS--DDPTYSEDNDPVE- 397 P Y+ ++ E L + + + ++ + +D + Sbjct: 359 WQLKTPIVEPTRVETPSYSENVREEVEVLPVDDAPIQVRKVVEPVLQEKLVDSHDDHADY 418 Query: 398 ---------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + + Q+H Y+ +Q GL ++DQHAA ER+ +E+ + + Sbjct: 419 LKLAEKIDTQPFEKEFPELHYFGQMHGTYLFAQNEKGLYMIDQHAAQERIKYEQFKVEIG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 SQ L+ P +++ + + + E + GI+ E FG N I+ PA + K Sbjct: 479 QVGRVSQPLMVPILLEFSKKDSVKLEERLSLVEEFGIEMEPFGQNTFQIQSHPAWIKKGQ 538 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 ++ +IID I+ T+ E M+C GSI++ + E +LL ++ K Sbjct: 539 EKAIIEEIIDFILADEKI-TVAKLREATAIMMSCKGSIKANHHLSEWEARQLLVDLAKCK 597 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 N C HGRP + L D+E LF R Sbjct: 598 NPYNCPHGRPVLVHLTNKDLEHLFKR 623 >gi|28210986|ref|NP_781930.1| DNA mismatch repair protein [Clostridium tetani E88] gi|81841224|sp|Q895H3|MUTL_CLOTE RecName: Full=DNA mismatch repair protein mutL gi|28203425|gb|AAO35867.1| DNA mismatch repair protein mutL [Clostridium tetani E88] Length = 620 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 181/620 (29%), Positives = 319/620 (51%), Gaps = 31/620 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E N+IAAGE++ERP +KEL+ENS+DAE+ + + GG+ +++D+G Sbjct: 3 RINILDECTFNKIAAGEVVERPFSVVKELVENSIDAEAKNITVEVKNGGQDLIKVSDDGA 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++I A H TSKI DD +++T GFRGEALPSI ++S + L S+P +G Sbjct: 63 GIYADDIQKAFLTHATSKILNIDDIFSLNTMGFRGEALPSIASISKILLKSKPLSETSGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G S V MN GT ++V DLF+ +PARL FLKS E++LI+D+I+R+++A Sbjct: 123 EIYMEGGNFISFNDVGMNTGTTIKVTDLFYNVPARLKFLKSSSRESSLISDIIQRLSLAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F +GN + I + G+ + N S+ I++ GY G Sbjct: 183 PDIAFKLINNGKTVLNTY---GSGNLEDAIRVIYGKKTLENISYFESHSDIISVYGYIGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 +RG+ N +F+N R ++ I + + A+ + + ++P V+ ++I P +DVNV Sbjct: 240 AELSRGSRNNQSIFVNKRYIKSGLITAAVENAFKSFLTINKFPFFVIFIDIFPEYIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK-----KGISTSSVLSKKMISSFHQDNAPKTH 354 HP K+ I+F+ I+ +F+ +++ ++I K + + ++ + + Sbjct: 300 HPTKTEIKFKEDKIVFSFVFKTVHESIKKSLYKEFNEQIKEDVKEDNKEIIKENPSLFQN 359 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV------------------ 396 + K + + ++ L + L ++ N + Sbjct: 360 VEKVQIPIDLKSASMDIERKSLVNSVLCNENNIVKDNINKNIYIDTKENLSENKLKNILK 419 Query: 397 --EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 E + Q YI++++ L I+DQHAAHE+++FE R ++ S Sbjct: 420 ENTEDMVSKLPDMKIIGQFDNTYILAESVKNLYIIDQHAAHEKILFETYRDKIKKDEVKS 479 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL P +++L + + +++ E ++ G E FG N I IRE+P I+ K +I L Sbjct: 480 QLLLQPIVLELDSEDFSYYVDNKELFYKTGFNIEVFGENTINIREVPFIMGKPDINNLFM 539 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 DII+ I + T++ + ++I A +AC ++++ K+ EM L+ ++ + C Sbjct: 540 DIINNIKAMGSGETIEVKYDSI-AMLACKSAVKAHDKLSKEEMEALINDLRFAKDPFNCP 598 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRPT IK+ ++EK F R Sbjct: 599 HGRPTIIKITSLELEKKFKR 618 >gi|20089411|ref|NP_615486.1| DNA mismatch repair protein [Methanosarcina acetivorans C2A] gi|19914309|gb|AAM03966.1| DNA mismatch repair protein [Methanosarcina acetivorans C2A] Length = 656 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 184/654 (28%), Positives = 319/654 (48%), Gaps = 67/654 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L IN+IAAGE+IERP+ +KEL++NS+DA ++ + + GGK I DNG Sbjct: 7 KIRILDRDTINKIAAGEVIERPASVVKELVDNSIDAGATEIRIEVEKGGKHSILIRDNGC 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ + ++ ++H TSK++ +D + T GFRGEAL SI A++ + +++RPP+ TG Sbjct: 67 GMSKADALLSYEKHATSKLTRIEDLDTVSTMGFRGEALASITAIAKVEILTRPPEELTGT 126 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G K+ PGT V V++LF+ PAR +LKS++ E ITD + R+A+A Sbjct: 127 KLVIHGGKVQETSDAGTAPGTSVYVKELFYNTPARRKYLKSDRTELAHITDTVTRLALAN 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SFT + + + + + + + ++G D + + L ++ + ++GY Sbjct: 187 PGISFTLLSEGKPVIR---STGSSDLFKSLVNLLGPDTARSMLPLEYRTEDFEIRGYVSK 243 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P NRG ++Q YVF+N R V + I +R Y IP GRYPV VL L ++P +VDVNV Sbjct: 244 PETNRGGSDQLYVFVNTRPVTSRAINMAVREGYYTKIPKGRYPVAVLALTLNPEEVDVNV 303 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS----------SVLSKKMISSFHQDN 349 HP K+ +RF + + +I++++K +++ G++ +S Q Sbjct: 304 HPRKAEVRFSREKEVGDAVIRAVEKVLSEHGLAPEVREKEGKRLQKTFEDPGLSEKIQPQ 363 Query: 350 APKTHLPKYAT----------------------------SLTNTQEKLFLQENRLSTNDL 381 LP+ A + +T+ +L E L ++ Sbjct: 364 ETPATLPEKAAGKEIGVREEAKVSENSRLLKEKSEAYTYPIKDTERRLKKSERLLDSDGK 423 Query: 382 LPSDDPTYSEDNDPVEESEATHYQ---------------------LGIACAQIHQNYIIS 420 D + +E E + + Q+ + YI++ Sbjct: 424 AGIQDGLKKVEPASKKEEEKVNERIKAEEKQSQKLKPKANTDLLEDLRIIGQVSKMYILA 483 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 + + LVI+DQHAAHER+++E++ + K Q L+TP +I+L E L+ E+ L Sbjct: 484 EKGEDLVIIDQHAAHERVLYEQVLRT---KKARVQELITPVMIELTPKERVLMEEYIPHL 540 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 G FG N + +P + + ++ D+I +++ E + T+ Sbjct: 541 EEYGFGISEFGDNTYVVTFVPEVFGRLEDTGVIHDVISDLLAEGKVKKDTGISEKVSKTL 600 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC +I+ G + +M L+ +++ + C HGRPT I +++++F R Sbjct: 601 ACRAAIKGGAACNTRQMEELIEQLKAAESPYSCPHGRPTVITFTKGELDRMFAR 654 >gi|255101104|ref|ZP_05330081.1| DNA mismatch repair protein [Clostridium difficile QCD-63q42] Length = 655 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 189/659 (28%), Positives = 301/659 (45%), Gaps = 71/659 (10%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 MK I L + IN+IAAGE++ERPS +KELIENS+DA ++++ I GGKS +ITD Sbjct: 1 MKNIINILDDLTINKIAAGEVVERPSSVVKELIENSIDAGANKISIDIIDGGKSLIKITD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG G+ S E+ + RH TSKI DD ++++ GFRGEAL SI AVS L + ++ Sbjct: 61 NGIGIPSSEVEKSFLRHATSKIKKIDDLYDLYSLGFRGEALASISAVSKLEMTTKTKDEI 120 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G +I + G KI S P+ GT + ++D+FF PAR FLKS ET I+D+I ++A Sbjct: 121 IGTKIYVEGGKIISKEPIGSTNGTTIIIKDIFFNTPARQKFLKSTHAETINISDLINKLA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 I P + F ++ +G I + G++ N +++ K N + GY Sbjct: 181 IGNPNIQFKYTNNNKQMLN---TPGDGKLVNTIRSIYGKEITENIIDVEFKCNHFKMNGY 237 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 G R N N +++IN R V+ K I+ I +Y IP+G++ V L +E+DP +D Sbjct: 238 IGNNNIYRSNKNLQHIYINKRFVKSKIIIDAITESYKSIIPIGKHAVCFLNIEVDPSCID 297 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VN+HP K I+F + + ++ + + + + Sbjct: 298 VNIHPNKLEIKFEKEQEVYIELRDFLKVKLIHSNLIGKYATYSDKKTQPRIAINSREKST 357 Query: 357 KY-------------------------------ATSLTNTQEKLFLQENRLSTNDLLPSD 385 Y + N + + N +D+ + Sbjct: 358 DYKLRNNDLLESTPKKSNITKGKDEVIEVVTLSSEKPINEFQSVSEVLNASVEDDVKNIN 417 Query: 386 DPTYSEDNDPVEESEATHYQLGI------------------------------ACAQIHQ 415 + ND ++E + Sbjct: 418 YLSEDSANDNIQEEFQVDGIKNEGNYYLGDSIKDSEEEYSCSSKRKFSLYGYSVIGVVFN 477 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 YII D + ++DQHAAHER+++E+ + F I Q LL P +I++ + I Sbjct: 478 TYIILSKDDSMYLLDQHAAHERILYERYMEKFYRQDINMQILLDPVVIEVSNVDMLQIEN 537 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 + E + G + E FG N I +R +P I + + IID I + ++ Y L+ Sbjct: 538 NLELFMKFGFELEIFGNNHIMVRCVPTIFGVPETEKFILQIIDNIEEITSNYDLKGER-- 595 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 A+MAC +I++ K+ IE+ LL ++EK N C HGRP +++ ++IEK+F R Sbjct: 596 -FASMACRSAIKANDKIYDIEIKSLLEQLEKCENPFTCPHGRPIMVEISKTEIEKMFKR 653 >gi|293364379|ref|ZP_06611105.1| DNA mismatch repair protein HexB [Streptococcus oralis ATCC 35037] gi|307702655|ref|ZP_07639607.1| DNA mismatch repair protein mutL [Streptococcus oralis ATCC 35037] gi|291317225|gb|EFE57652.1| DNA mismatch repair protein HexB [Streptococcus oralis ATCC 35037] gi|307623771|gb|EFO02756.1| DNA mismatch repair protein mutL [Streptococcus oralis ATCC 35037] Length = 649 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 180/636 (28%), Positives = 309/636 (48%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQITIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEKVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + + ++I ++ ++ + ++ + + ++ +T LP Sbjct: 301 PTKQEVRISKERELMALLSEAISNSLKEQALIPDALENLAKSTVRNRQKVEQTILPLKEN 360 Query: 361 SLTNT---------------------------------------QEKLFLQENRLSTNDL 381 +L KL E + + D Sbjct: 361 TLYYEKTEVTRASQAEVADHQVELTEEGQDLTLFAKETLEQLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASLDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMALLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|299535289|ref|ZP_07048612.1| DNA mismatch repair protein [Lysinibacillus fusiformis ZC1] gi|298729271|gb|EFI69823.1| DNA mismatch repair protein [Lysinibacillus fusiformis ZC1] Length = 620 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 177/621 (28%), Positives = 296/621 (47%), Gaps = 35/621 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + E + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ + G + Q+ DNG G Sbjct: 4 IQIMDEWLSNKIAAGEVVERPASVVKELVENAIDAGSTSIDVFLLEAGLTSIQVIDNGSG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M E+ M+ RH TSKI D I T GFRGEAL SI +VS +TL++ +G Sbjct: 64 MDEEDALMSFSRHATSKIHQEHDLFRIRTLGFRGEALASIASVSKMTLIT--SNGESGTH 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G I + +P + GT + V LFF PARL ++K+ Q E D++ R+A+ P Sbjct: 122 LELEGGHILTHKPGPLRKGTDLTVSQLFFNTPARLKYMKTIQTELGHTIDLMNRLALGNP 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++F ++ + G+ + ++ + G V +S++ + G+ +P Sbjct: 182 QIAFRLLHNGQ---QLLQTNGRGDVQQVLAAIYGIHNAKKMVSFQGESHDYRISGFVSLP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + N +F+NGR V+ + I AY +P+ R+P+VVL +E DP DVNVH Sbjct: 239 EVTRASKNYMTLFVNGRWVKHYLVQKAIVDAYHTYLPIERFPIVVLYIEGDPYLTDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK--- 357 PAK IR + I ++I++ I +K++ + PK Sbjct: 299 PAKHQIRLSKEADLLKLIEETIRETIRNIIRVPQMEKKEKIVKPATEQLNIWKPAPKIDV 358 Query: 358 ----------------YATSLTNTQEKLFLQENRLSTNDLLPS------DDPTYSEDNDP 395 +L E + R + L P D+ T +E ++ Sbjct: 359 EKMNAIVEKLYDVQTIQENNLEQIDEPKPISTVREESWQLTPQIEAETIDEVTIAEQSEI 418 Query: 396 VEESEATHYQL-GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS-TKIT 453 +EE QIH YI++Q DG ++DQHAA ER+ +E R+ Sbjct: 419 LEEMPTKEPFPELEVVGQIHGTYIVAQMEDGFYLIDQHAAQERIKYEFFREKVGQVNPHE 478 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 Q LL P E ++ EH +L +G+ E FG ++ +RE P+ + +++ Sbjct: 479 RQALLLPLTFHYAADEALILREHRHELEAVGVFLEEFGQSSFVVREHPSWFPQGEEQEII 538 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 D+I++++ + ++ E M+C SI++ + +M LLR++ N C Sbjct: 539 EDLIEQVLTTKKAD-IKKLREAAAIMMSCKKSIKANYYLTKEQMETLLRDLRNADNPFTC 597 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 HGRP I ++EK+F R Sbjct: 598 PHGRPVLIHFTSYEVEKMFKR 618 >gi|126699585|ref|YP_001088482.1| DNA mismatch repair protein [Clostridium difficile 630] gi|115251022|emb|CAJ68851.1| DNA mismatch repair protein MutL [Clostridium difficile] Length = 655 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 189/659 (28%), Positives = 301/659 (45%), Gaps = 71/659 (10%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 MK I L + IN+IAAGE++ERPS +KELIENS+DA ++++ I GGKS +ITD Sbjct: 1 MKNIINILDDLTINKIAAGEVVERPSSVVKELIENSIDAGANKISIDIIDGGKSLIKITD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG G+ S E+ + RH TSKI DD ++++ GFRGEAL SI AVS L + ++ Sbjct: 61 NGIGIPSSEVEKSFLRHATSKIKKIDDLYDLYSLGFRGEALASISAVSKLEMTTKTKDEI 120 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G +I + G KI S P+ GT + ++D+FF PAR FLKS ET I+D+I ++A Sbjct: 121 IGTKIYVEGGKIISKEPIGFTNGTTIIIKDIFFNTPARQKFLKSTHAETINISDLINKLA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 I P + F ++ +G I + G++ N +++ K N + GY Sbjct: 181 IGNPNIQFKYTNNNKQMLN---TPGDGKLVNTIRSIYGKEITENIIDVEFKCNHFKMNGY 237 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 G R N N +++IN R V+ K I+ I +Y IP+G++ V L +E+DP +D Sbjct: 238 IGNNNIYRSNKNLQHIYINKRFVKSKIIIDAITESYKSIIPIGKHAVCFLNIEVDPSCID 297 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VN+HP K I+F + + ++ + + + + Sbjct: 298 VNIHPNKLEIKFEKEQEVYIELRDFLKVKLIHSNLIGKYATYSDKKTQPRIAINSREKST 357 Query: 357 KY-------------------------------ATSLTNTQEKLFLQENRLSTNDLLPSD 385 Y + N + + N +D+ + Sbjct: 358 DYKLRNNDLLESTPKNSNITKGKDEVIEVVTLSSEKPINEFQSVSEVLNASVEDDVKNIN 417 Query: 386 DPTYSEDNDPVEESEATHYQLGI------------------------------ACAQIHQ 415 + ND ++E + Sbjct: 418 YLSEDSANDNIQEEFQVDGIKNEGNYYLGDSIKDSEEEYLCSSKRKFSLYGYSVIGVVFN 477 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 YII D + ++DQHAAHER+++E+ + F I Q LL P +I++ + I Sbjct: 478 TYIILSKDDSMYLLDQHAAHERILYERYMEKFYRQDINMQILLDPVVIEVSNVDMLQIEN 537 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 + E + G + E FG N I +R +P I + + IID I + ++ Y L+ Sbjct: 538 NLELFMKFGFELEIFGNNHIMVRCVPTIFGVPETEKFILQIIDNIEEITSNYDLKGER-- 595 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 A+MAC +I++ K+ IE+ LL ++EK N C HGRP +++ ++IEK+F R Sbjct: 596 -FASMACRSAIKANDKIYDIEIKSLLEQLEKCENPFTCPHGRPIMVEISKTEIEKMFKR 653 >gi|306828751|ref|ZP_07461943.1| DNA mismatch repair protein HexB [Streptococcus mitis ATCC 6249] gi|304428929|gb|EFM32017.1| DNA mismatch repair protein HexB [Streptococcus mitis ATCC 6249] Length = 649 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 179/636 (28%), Positives = 309/636 (48%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQITIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEKVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + + ++I ++ ++ + ++ + + ++ +T LP Sbjct: 301 PTKQEVRISKERELMALVSEAISNSLKEQALIPDALENLAKSTVRNRQKVEQTILPLKEN 360 Query: 361 SLTNT---------------------------------------QEKLFLQENRLSTNDL 381 +L KL E + + D Sbjct: 361 TLYYEKTELSKPSQAEVADHQVELTEEGKDLTLFAQETLDQLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E E++ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASLDKAYDKLEREESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLRERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKQSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|255306972|ref|ZP_05351143.1| DNA mismatch repair protein [Clostridium difficile ATCC 43255] Length = 655 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 189/659 (28%), Positives = 301/659 (45%), Gaps = 71/659 (10%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 MK I L + IN+IAAGE++ERPS +KELIENS+DA ++++ I GGKS +ITD Sbjct: 1 MKNIINILDDLTINKIAAGEVVERPSSVVKELIENSIDAGANKISIDIIDGGKSLIKITD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG G+ S E+ + RH TSKI DD ++++ GFRGEAL SI AVS L + ++ Sbjct: 61 NGIGIPSSEVEKSFLRHATSKIKKIDDLYDLYSLGFRGEALASISAVSKLEMTTKTKDEI 120 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G +I + G KI S P+ GT + ++D+FF PAR FLKS ET I+D+I ++A Sbjct: 121 IGTKIYVEGGKIISKEPIGSTNGTTIIIKDIFFNTPARQKFLKSTHAETINISDLINKLA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 I P + F ++ +G I + G++ N +++ K N + GY Sbjct: 181 IGNPNIQFKYTNNNKQMLN---TPGDGKLVNTIRSIYGKEITENIIDVEFKCNHFKMNGY 237 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 G R N N +++IN R V+ K I+ I +Y IP+G++ V L +E+DP +D Sbjct: 238 IGNNNIYRSNKNLQHIYINKRFVKSKIIIDAITESYKSIIPIGKHAVCFLNIEVDPSCID 297 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VN+HP K I+F + + ++ + + + + Sbjct: 298 VNIHPNKLEIKFEKEQEVYIELRDFLKVKLIHSNLIGKYATYSDKKTQPRIAINSREKST 357 Query: 357 KY-------------------------------ATSLTNTQEKLFLQENRLSTNDLLPSD 385 Y + N + + N +D+ + Sbjct: 358 DYKLRNNDLLESTHKNSNITKGKDEVIEVVTLSSEKPINEFQSVSEVLNASVEDDVKNIN 417 Query: 386 DPTYSEDNDPVEESEATHYQLGI------------------------------ACAQIHQ 415 + ND ++E + Sbjct: 418 YLSEDSVNDNIQEEFQVDGIKNEGNYYLGDSIKDSEEEYSCSSKLKFSLYGYSVIGVVFN 477 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 YII D + ++DQHAAHER+++E+ + F I Q LL P +I++ + I Sbjct: 478 TYIILSKDDSMYLLDQHAAHERILYERYMEKFYRQDINMQILLDPVVIEVSNVDMLQIEN 537 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 + E + G + E FG N I +R +P I + + IID I + ++ Y L+ Sbjct: 538 NLELFMKFGFELEIFGNNHIMVRCVPTIFGVPETEKFILQIIDNIEEITSNYDLKGER-- 595 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 A+MAC +I++ K+ IE+ LL ++EK N C HGRP +++ ++IEK+F R Sbjct: 596 -FASMACRSAIKANDKIYDIEIKSLLEQLEKCENPFTCPHGRPIMVEISKTEIEKMFKR 653 >gi|254975572|ref|ZP_05272044.1| DNA mismatch repair protein [Clostridium difficile QCD-66c26] gi|255092960|ref|ZP_05322438.1| DNA mismatch repair protein [Clostridium difficile CIP 107932] gi|255314701|ref|ZP_05356284.1| DNA mismatch repair protein [Clostridium difficile QCD-76w55] gi|255517376|ref|ZP_05385052.1| DNA mismatch repair protein [Clostridium difficile QCD-97b34] gi|255650482|ref|ZP_05397384.1| DNA mismatch repair protein [Clostridium difficile QCD-37x79] gi|260683592|ref|YP_003214877.1| DNA mismatch repair protein [Clostridium difficile CD196] gi|260687252|ref|YP_003218386.1| DNA mismatch repair protein [Clostridium difficile R20291] gi|306520447|ref|ZP_07406794.1| DNA mismatch repair protein [Clostridium difficile QCD-32g58] gi|260209755|emb|CBA63546.1| DNA mismatch repair protein [Clostridium difficile CD196] gi|260213269|emb|CBE04803.1| DNA mismatch repair protein [Clostridium difficile R20291] Length = 655 Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats. Identities = 189/659 (28%), Positives = 301/659 (45%), Gaps = 71/659 (10%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 MK I L + IN+IAAGE++ERPS +KELIENS+DA ++++ I GGKS +ITD Sbjct: 1 MKNIINILDDLTINKIAAGEVVERPSSVVKELIENSIDAGANKISIDIIDGGKSLIKITD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG G+ S E+ + RH TSKI DD ++++ GFRGEAL SI AVS L + ++ Sbjct: 61 NGIGIPSSEVEKSFLRHATSKIKKIDDLYDLYSLGFRGEALASISAVSKLEMTTKTKDEI 120 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G +I + G KI S P+ GT + ++D+FF PAR FLKS ET I+D+I ++A Sbjct: 121 IGTKIYVEGGKIISKEPIGSTNGTTIIIKDIFFNTPARQKFLKSTHAETINISDLINKLA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 I P + F ++ +G I + G++ N +++ K N + GY Sbjct: 181 IGNPNIQFKYTNNNKQMLN---TPGDGKLVNTIRSIYGKEITENIIDVEFKCNHFKMNGY 237 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 G R N N +++IN R V+ K I+ I +Y IP+G++ V L +E+DP +D Sbjct: 238 IGNNNIYRSNKNLQHIYINKRFVKSKIIIDAITESYKSIIPIGKHAVCFLNIEVDPSCID 297 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VN+HP K I+F + + ++ + + + + Sbjct: 298 VNIHPNKLEIKFEKEQEVYIELRDFLKVKLIHSNLIGKYATYSDKKTQPRIAINSREKST 357 Query: 357 KY-------------------------------ATSLTNTQEKLFLQENRLSTNDLLPSD 385 Y + N + + N +D+ + Sbjct: 358 DYKLRNNDLLESTPKNSNITKDKDEVIEVVTLSSEKPINEFQSVSEVLNASVEDDVKNIN 417 Query: 386 DPTYSEDNDPVEESEATHYQLGI------------------------------ACAQIHQ 415 + ND ++E + Sbjct: 418 YLSEDSANDNIQEEFQVDGIKNEGNYYLGDSIKDSEEEYLCSSKRKFSLYGYSVIGVVFN 477 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 YII D + ++DQHAAHER+++E+ + F I Q LL P +I++ + I Sbjct: 478 TYIILSKDDSMYLLDQHAAHERILYERYMEKFYRQDINMQILLDPVVIEVSNVDMLQIEN 537 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 + E + G + E FG N I +R +P I + + IID I + ++ Y L+ Sbjct: 538 NLELFMKFGFELEIFGNNHIMVRCVPTIFGVPETEKFILQIIDNIEEITSNYDLKGER-- 595 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 A+MAC +I++ K+ IE+ LL ++EK N C HGRP +++ ++IEK+F R Sbjct: 596 -FASMACRSAIKANDKIYDIEIKSLLEQLEKCENPFTCPHGRPIMVEISKTEIEKMFKR 653 >gi|303259226|ref|ZP_07345204.1| DNA mismatch repair protein [Streptococcus pneumoniae SP-BS293] gi|303260982|ref|ZP_07346931.1| DNA mismatch repair protein [Streptococcus pneumoniae SP14-BS292] gi|303263309|ref|ZP_07349232.1| DNA mismatch repair protein [Streptococcus pneumoniae BS397] gi|303265474|ref|ZP_07351374.1| DNA mismatch repair protein [Streptococcus pneumoniae BS457] gi|303267968|ref|ZP_07353770.1| DNA mismatch repair protein [Streptococcus pneumoniae BS458] gi|302637819|gb|EFL68305.1| DNA mismatch repair protein [Streptococcus pneumoniae SP14-BS292] gi|302639644|gb|EFL70101.1| DNA mismatch repair protein [Streptococcus pneumoniae SP-BS293] gi|302642664|gb|EFL73009.1| DNA mismatch repair protein [Streptococcus pneumoniae BS458] gi|302644914|gb|EFL75161.1| DNA mismatch repair protein [Streptococcus pneumoniae BS457] gi|302647082|gb|EFL77306.1| DNA mismatch repair protein [Streptococcus pneumoniae BS397] Length = 649 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 180/636 (28%), Positives = 309/636 (48%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL + + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLSTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 ETSFSLISDGKEMTR---TAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMALVSEAISNSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K + + E KL E + + D Sbjct: 361 TLYYEKTEPTRPSQAEVADYQVELTEERQDLTLFAKETLDQLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E E++ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASLDKAYDKLEREESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGDVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|320529999|ref|ZP_08031075.1| DNA mismatch repair protein [Selenomonas artemidis F0399] gi|320137796|gb|EFW29702.1| DNA mismatch repair protein [Selenomonas artemidis F0399] Length = 621 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 186/620 (30%), Positives = 302/620 (48%), Gaps = 33/620 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + IN+IAAGE++ERP+ +KEL+EN++DA ++ +E I GGG SF ++TDNG Sbjct: 3 RIHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGATAIEIEIMGGGTSFIRVTDNGR 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + A+ RH TSKIS+ D + T GFRGEALP+I +VS +L++R + G Sbjct: 63 GMERSDAETAILRHATSKISNVADLQTVGTLGFRGEALPTIASVSRFSLITRTADADLGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G K + + + GT V V DLFF PAR FLK ++ E I+D + +A++ Sbjct: 123 RVEILGGKTTEIEDAGCDVGTTVRVEDLFFNTPARKKFLKMDRTEAGKISDYVIMLALSR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE--LNEKSNEITLQGYT 237 P ++F F + + + I + G D + +++ +I + GY Sbjct: 183 PDIAFRFVNNNRLTLM---TAGDDSLRRAIESIYGGDAAGALIPLDFTDEAGDIRITGYI 239 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P+ R + +NGRT+Q++ I I Y +P +P+ VL +E+ R +DV Sbjct: 240 SKPSMIRSSRAWQTYIVNGRTIQNRAIAKAIDNVYRALVPKMGFPLAVLRIEVPQRTIDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD--------N 349 NVHP K+ ++F + I + +++Q A+ T+S+ + FH + Sbjct: 300 NVHPQKTEMKFEDEGRIFKAVYKTVQGAVRGAAGETASIAAAVEKPKFHYESMPLRMPVT 359 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND-----PVEESEATHY 404 P +P + + R ++ DL D ++ EES + Sbjct: 360 PPPASVPHTYAPTAMPAQTVHEAAQRAASADLRSVQDIVGRARSEERAALMAEESPGAYR 419 Query: 405 QL----------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 I Q+ YI++Q+T L I+DQHAAHER++F++ + I S Sbjct: 420 AEPAPAGTIESGLIPIGQVDLTYIVAQSTRALYIIDQHAAHERILFDRF--CALAEGIPS 477 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q +L I+ E I E+ E RLG + E G + E PA + ++R Sbjct: 478 QQMLVHAILSFDARETQYIEENAELFSRLGFRMEPAGDREYRLTESPADVPTDEAEDVIR 537 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 +I+ + + + R LATMAC +I++G ++ +M LL E+ P C Sbjct: 538 EILVSLGELHAATPAELRQAG-LATMACRAAIKAGEELSFRQMEILLEELRTTPFPFTCP 596 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRPT + +D+ K+F R Sbjct: 597 HGRPTILTFDTTDLAKMFKR 616 >gi|251783478|ref|YP_002997783.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242392110|dbj|BAH82569.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 660 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 180/648 (27%), Positives = 314/648 (48%), Gaps = 59/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE++ERP+ +KEL+EN++DA+SS+V I G QITDNG Sbjct: 3 KIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQVTIDIEESGLKKIQITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S +T+ + ++N G+ Sbjct: 63 GMSPEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEDNHGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I ++ + GT ++V +LF+ PARL ++KS Q E I DV+ R+++A+ Sbjct: 123 LLVAIGGEIETLEETSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSFT + ++ S G+ + I+ + G + + ++ + + GY + Sbjct: 183 PEVSFTLISDGR---QLTQTSGTGDLRQAIAGIYGLNTAKKMIAISNADLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+VV+ ++IDP DVNV Sbjct: 240 PELTRANRNYMTILINGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I +I +++ ++ + ++ + S+ H +T LP + Sbjct: 300 HPTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPLQS 359 Query: 360 TSL--TNTQEKLFLQENRLST--------------------------------------- 378 L + F++E+ +S Sbjct: 360 KGLYYDPQRNDFFVKESDVSEKIPESNFHNTEIDKTVKDQRTEQFPDLGENTGFSSVKRA 419 Query: 379 ------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGL 426 + S+ +E E + + Q+H Y+ +Q DGL Sbjct: 420 SRSQDEITDADHPGFDLKNKQKLSQMLTRLENEEQSVFPELDYFGQMHGTYLFAQGKDGL 479 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 I+DQHAA ER+ +E R + Q LL P + + + + E L+ +GI Sbjct: 480 FIIDQHAAQERVKYEYYRDKIGEVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVGIF 539 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E +G N +RE P + ++ I + ++ D ++ ++ +++ + M+C SI Sbjct: 540 LEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKRSI 598 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + LL ++ + N C HGRP I +D+EK+F R Sbjct: 599 KANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRR 646 >gi|254293353|ref|YP_003059376.1| DNA mismatch repair protein [Hirschia baltica ATCC 49814] gi|254041884|gb|ACT58679.1| DNA mismatch repair protein MutL [Hirschia baltica ATCC 49814] Length = 667 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 237/653 (36%), Positives = 362/653 (55%), Gaps = 61/653 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L IN+IAAGE++ERP+ A KEL+EN+LDA + + +I GGG S I D+G G Sbjct: 14 IHRLPADAINRIAAGEVVERPAAAAKELMENALDAGARHIRVLIEGGGLSRMVIEDDGKG 73 Query: 63 MTSEEIPMAVQRHCTSKISD------DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 M++EE+P+A++RH TSK+ D NIHT GFRGEALPSIG+VS +T+ SR + Sbjct: 74 MSAEELPIAIERHATSKLQADAEGRVDLLNIHTLGFRGEALPSIGSVSRMTITSRAKGAD 133 Query: 117 TGAQIAISGEKISSVRPVAM----NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 Q+ I G + P A + GT +EVRDLF+ PARL F+KSE+ ET +TD + Sbjct: 134 EAYQLRIEGGVVEGPLPAAWTGLSDSGTRIEVRDLFYATPARLKFMKSERAETMALTDTV 193 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQST--NGNFPERISQVIGEDFINNAVELNEKSNE 230 +R+A+A V + + + +R+ ++G++F NA E++ + Sbjct: 194 KRLAMANADVGMVLESNGRKVINLAPEDGAFEEARLKRLGAIMGKEFRENACEIDAEREG 253 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 + + G+ G+PT NRGNA Y+F+NGR V+D+ + IR AY + + R+P+ L +++ Sbjct: 254 VFVTGFAGLPTLNRGNAQHQYLFVNGRPVKDRLLTGVIRAAYQDFLARDRHPMAALFVDL 313 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI-------- 342 P VDVNVHPAK+ +RFR+ +R +I +++ + G S+ ++ + Sbjct: 314 HPEFVDVNVHPAKTEVRFRDAGNVRGLLIGALRHTLAAAGHRASTTVAGDALGRVITETQ 373 Query: 343 -----------SSFHQDNAPKTHL---------------PKYATSLTN------------ 364 P T + P + S Sbjct: 374 ARQAELQMGPNGPMQSAYQPGTSVLQSTMGRSASGGQWRPSASPSSDEINTYLDATGLSG 433 Query: 365 -TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE--SEATHYQLGIACAQIHQNYIISQ 421 +E Q N S SD E N+ + E + + LG+A AQ+H+ Y+++Q Sbjct: 434 GFREDAPSQYNGQSGAFAATSDMSARVEPNEMESQRAQELSRFPLGVARAQLHETYVVAQ 493 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 T DG+VIVDQHAAHERL++E+M++ + Q LL PEI++L E E ++ E+L Sbjct: 494 TDDGIVIVDQHAAHERLVYERMKRQMELDGVKRQALLIPEIVELTEDEAMRVLSRSEELL 553 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 LG++ E FG IA+R PA+ + L++D+ D+ + L++R E ++ MA Sbjct: 554 ELGLEIEPFGVGCIAVRATPALFGDMDAVGLIKDLADDFAEYDAGLALKERFEEVMGNMA 613 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C GS+R+GR++ EMN LLR+ME P+S QCNHGRPT+++LKL+DIE+LFGR Sbjct: 614 CRGSVRAGRRLTGEEMNSLLRQMENTPHSGQCNHGRPTYVELKLADIERLFGR 666 >gi|78187823|ref|YP_375866.1| DNA mismatch repair protein [Chlorobium luteolum DSM 273] gi|123743593|sp|Q3B1F8|MUTL_PELLD RecName: Full=DNA mismatch repair protein mutL gi|78167725|gb|ABB24823.1| DNA mismatch repair protein MutL [Chlorobium luteolum DSM 273] Length = 626 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 177/632 (28%), Positives = 303/632 (47%), Gaps = 45/632 (7%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L + + N+I+AGE+++RP+ +KEL+EN++D+ + R+ VI G+ +I DN Sbjct: 1 MPSIARLPDNVANKISAGEVVQRPASVVKELLENAIDSGADRISVVIKDAGRELVRIIDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ + ++V+R TSK+ DD + T GFRGEAL SI +VSH L +R Sbjct: 61 GRGMSRADALLSVERFATSKLRDVDDLDTLGTLGFRGEALASISSVSHFELRTRMTDAPV 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + G V GT V VR+LF+ +PAR FLKS E I +++R ++ Sbjct: 121 ALRFRYEGGIAVEESEVQGEAGTSVSVRNLFYNVPARRKFLKSNATEYGHIFELVRSFSL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 AYP++ + + + ER+ G+ F ++ +E+ E+++ ++++GY Sbjct: 181 AYPEIQWQLLNDDQELFNFRT----SDMLERLDTFYGKGFADSLIEVGEENDYLSIRGYI 236 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P + Y FIN R +Q++ + ++ AYAE + + P +L L IDP +VDV Sbjct: 237 GRPALQKRKKLDQYFFINRRPIQNRMLTQALQQAYAELLVERQAPFALLFLGIDPSRVDV 296 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------- 344 NVHPAK +RF + +RN I++A+ S + + Sbjct: 297 NVHPAKLEVRFDDERSVRNMFYPVIKRAVTLHDFSPDLAAGGRTSQAGDDSASRGFTHAG 356 Query: 345 ----------------------FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLL 382 + + A + QE +F + + + Sbjct: 357 GGGFRTLAFQEVPERAITTGELYGSYREGAFGSSRPAVPQPSHQEVMFPVPEVPAAREDI 416 Query: 383 PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 S ++ E + Q+H Y+I Q GL+I+DQH AHER+++E+ Sbjct: 417 --SQLLRSSMHEGPEGAGVEPKGEEPKIWQLHNKYLICQIKTGLMIIDQHVAHERVLYER 474 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 + S SQ LL P+ ++ E + E +DL+RLG FG A+ I +P Sbjct: 475 AVEVMESRVPNSQQLLFPQKVEFRPWEYEVFEEIKDDLYRLGFNLRSFGTRAVMIEGVPQ 534 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 + + +++D+I E +++T L+ R +N+ + +C +I +G+K+ EM L+ Sbjct: 535 DVRPGSEATIMQDMIAEYRENATRLRLE-RRDNLAKSYSCRNAIMAGQKLSMGEMRTLID 593 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP IK+ L++++ +FGR Sbjct: 594 NLFATREPYSCPHGRPVIIKMTLTELDHMFGR 625 >gi|42521099|ref|NP_967014.1| DNA mismatch repair protein MutL-1 [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410840|gb|AAS14948.1| DNA mismatch repair protein MutL-1 [Wolbachia endosymbiont of Drosophila melanogaster] Length = 608 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 236/614 (38%), Positives = 352/614 (57%), Gaps = 27/614 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L K IN+IAAGE+IERP+ +KEL+EN++DA S +E I GG++ +TD+G Sbjct: 1 MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSLEIEIKIESGGRNLIIVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ +A RH TSK+SD + I GFRGEALPSI AVS + L S+ + N Sbjct: 61 NGVEKNDLELAFMRHATSKLSDNELIEIKHLGFRGEALPSIAAVSRIKLSSKAREANEAW 120 Query: 120 QIAISG-EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I+ G EKI P +++ GT +EVRDLFF P RL FLK+E+ ET I D++ +A+ Sbjct: 121 SISYEGGEKIGEQTPYSLSQGTHIEVRDLFFATPNRLKFLKTERAETQSIVDIVNNLAMI 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + FT ++ K+ + + R+ +V E+F N++E+NE+ + I L G+ Sbjct: 181 NYHIGFTLTSGNK---KLLKYAKQTSLFHRLCEV-EEEFQGNSLEINEEEDGIKLTGHIC 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 PT NRG + Q Y F+NGR ++D ++ +R AY + IP RYP L LEI QVDVN Sbjct: 237 KPTVNRGKSTQIYTFVNGRPIKDNLLIGAVRYAYHDFIPSDRYPFAALHLEIPYDQVDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK---KMISSFHQDNAPKTHL 355 VHP KS +RF+N +I + + + KA++++ + + K + F + N K Sbjct: 297 VHPNKSEVRFQNKKLIYEIMTRGLIKALSRRIGTFPAHDQKMDSTLPDPFDKPNVQKEFY 356 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT------------- 402 K + N K F N + S Y+ ++E Sbjct: 357 EKRPSPFKNQLIKEFASPNEKAKGLSEQSKSFDYTGIQKFPSQAETMVLEKKVLEQVDLI 416 Query: 403 -HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 + LG A Q++ YII++ D L+IVDQHAAHERL++E ++ + + Q LL PE Sbjct: 417 ESHPLGFARCQVYNTYIIAEVRDKLIIVDQHAAHERLVYECLK---QKSSVKRQKLLLPE 473 Query: 462 IIDL-LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 +++ + +I + + L +G E N + ++EIPAIL ++ ++L +I+D + Sbjct: 474 TVEIKNQAGMEMIEIYKDKLFEMGFDIEIKPENKVIVKEIPAILGAIDVKEMLINIVDRL 533 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + T ++D++ ILAT+ACYGSIR+GRKM+ EMN LLR+MEK P S QCNHGRPT+ Sbjct: 534 TEIEDTLPVEDKVNKILATIACYGSIRAGRKMRFEEMNVLLRQMEKTPYSGQCNHGRPTY 593 Query: 581 IKLKLSDIEKLFGR 594 I++KLSDIEKLF R Sbjct: 594 IEMKLSDIEKLFER 607 >gi|300172902|ref|YP_003772067.1| DNA mismatch repair protein MutL [Leuconostoc gasicomitatum LMG 18811] gi|299887280|emb|CBL91248.1| DNA mismatch repair protein MutL [Leuconostoc gasicomitatum LMG 18811] Length = 661 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 180/647 (27%), Positives = 308/647 (47%), Gaps = 58/647 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS + NQIAAGE+IERP+ +KEL+EN++D+ ++++E ++ G++ ++ DNG Sbjct: 3 KIHELSNLLANQIAAGEVIERPASVVKELVENAIDSGATQIEVIVEDAGETLIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+A RH TSKI D NI + GFRGEALPSI A++ +TL + G Sbjct: 63 GIEPEDVPLAFTRHATSKIMNRHDLFNIVSLGFRGEALPSIAAIADVTLNTTTELATQGL 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I G K S P GT++ VRDLF+ PARL +LK Q E + + D++ R+A++Y Sbjct: 123 MYHIKGGKQVSATPANGRRGTVISVRDLFYNTPARLKYLKRPQTELSRVADIMNRLALSY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++FT + + + NGN + I+ + G D + + ++ + GY + Sbjct: 183 TNIAFTVVSDGR---DLLKTTGNGNQQQVIAAIYGRDTAQKMLSFAGEDDDFNVTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P RG+ + +NGR +++ + + I Y + +GR+P+ V+ + DP +DVNV Sbjct: 240 PELTRGSREYLTILVNGRFIKNFTVSNAIIHGYGSKLMIGRFPMGVININTDPLLIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS--VLSKKMISSFHQDNAPKTHLPK 357 HP KS IR T + ++Q+I+ + + + + L + + ++ P P Sbjct: 300 HPQKSEIRLSKETELSELLVQTIKARLADENLIPDAYENLYGQTKKTEYKRVQPAQIAPW 359 Query: 358 YATSLTNTQEKLFLQE-------------------------------------------- 373 T+L ++ Sbjct: 360 LNTNLATVKQPDSKTNITINTGSDIAGISITKRAQLSARSVSTFVTKYEHEATLPVFDTP 419 Query: 374 ------NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLV 427 ++T +D S++ V + + Q+H ++ +QT DGL Sbjct: 420 VTEQVTESVATYQSPFTDIAVKSQETLDVTPQRPSGFPDLSYIGQMHGTFLFAQTEDGLF 479 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 ++DQHAA ER+ +E RQ Q LL P +I+ + I +H++DL +G+ Sbjct: 480 LIDQHAAQERINYEYYRQKIGEVSDDKQRLLVPIVINYTASDMLKIADHEQDLLHVGLTV 539 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR 547 FGP ++ IRE P +R++ID I+ T+ + E M+C +IR Sbjct: 540 MPFGPTSVIIREHPTWFENGQEEDTIREMIDWILRDG-ALTVAEFREKAAIMMSCKRAIR 598 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + + LL+ + + N C HGRP + L+++EK+F R Sbjct: 599 ANMHLSDAQARTLLQTLANSENPYNCPHGRPVVTQFTLTEMEKMFKR 645 >gi|307711077|ref|ZP_07647499.1| DNA mismatch repair protein mutL [Streptococcus mitis SK321] gi|307617039|gb|EFN96217.1| DNA mismatch repair protein mutL [Streptococcus mitis SK321] Length = 649 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 181/636 (28%), Positives = 312/636 (49%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAMDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ + P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEIIPATSPAGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I K++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMALVSEAISKSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K S + E KL E + + D Sbjct: 361 TLYYEKTEPSRPSQAEVADYQVELTDEGQDLTLFAKETLDQLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E E++ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASLDKAYDKLEREESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGDVDQSQQQLLVPYIFEFPADDALRLKERMAHLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|312866835|ref|ZP_07727048.1| DNA mismatch repair protein, C-terminal domain protein [Streptococcus parasanguinis F0405] gi|311097618|gb|EFQ55849.1| DNA mismatch repair protein, C-terminal domain protein [Streptococcus parasanguinis F0405] Length = 647 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 182/635 (28%), Positives = 307/635 (48%), Gaps = 46/635 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L E + NQIAAGE+IERP+ +KEL+ENS+DA +S++ I G +ITDNG Sbjct: 3 QIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGASQIIVEIEEAGLKSIRITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+ +A++RH TSKI D I T GFRGEA+PSI +VS LTL++ G Sbjct: 63 GIAQDEVALALRRHATSKIKSQADLFRIRTLGFRGEAMPSIASVSILTLLTAQEGAAHGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G +I V P GT + V DLFF PARL +LKS+Q E + I D++ R+++A+ Sbjct: 123 KLVAKGGEIEEVEPATSPVGTKITVEDLFFNTPARLKYLKSQQAELSHIVDILNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT K + GN + I+ V G V + + + + G+ + Sbjct: 183 PEIAFTLINDGKEMTK---TAGTGNLRQAIAGVYGLASAKKMVAIENRDLDFEVTGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N +FINGR +++ + I Y + +GR+P+ ++ ++IDP DVNV Sbjct: 240 PELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAIINIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HP K +R + I Q+I A+ ++ + ++ + + + +T LP Sbjct: 300 HPTKQEVRISKERELMALISQAIANALKEQDLIPDALENLAKSTIRRTEKLVQTTLPLKE 359 Query: 357 ------------KYATSLTNTQEKLFLQ---ENRLSTN---------------------- 379 K + + Q L + E R+ N Sbjct: 360 NRLYYDRESQDFKLRPEVADPQRPLADETATEARIQENPVEKPTSAIKFAERKTAVYDEL 419 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 D D + + D ++ E + + Q+H Y+ +Q GL I+DQHAA ER+ Sbjct: 420 DHPELDLASLDKAYDKLDGEEHSTFPELEYFGQMHGTYLFAQGNGGLYIIDQHAAQERVK 479 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E+ R+ + Q LL P I + + + + L +G+ E +G N + +RE Sbjct: 480 YEEYRESIGDVDGSQQQLLVPYIFEFPADDLIRLQQRKHLLEEVGVYLEEYGANQLILRE 539 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P + ++ I + ++ D ++ + +++ + M+C SI++ + Sbjct: 540 HPIWMKEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHTLDDYSARD 598 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L+ ++ + N C HGRP + SD+EK+F R Sbjct: 599 LIYQLSQCDNPYNCPHGRPVLVNFTKSDMEKMFRR 633 >gi|225853787|ref|YP_002735299.1| DNA mismatch repair protein [Streptococcus pneumoniae JJA] gi|254766179|sp|C1CBX8|MUTL_STRZJ RecName: Full=DNA mismatch repair protein mutL gi|225722823|gb|ACO18676.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae JJA] Length = 649 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 181/636 (28%), Positives = 312/636 (49%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I + + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMALVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K S + E KL E + + D Sbjct: 361 TLYYEKTEPSRPSQTEVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASIDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALCLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|307710211|ref|ZP_07646654.1| DNA mismatch repair protein mutL [Streptococcus mitis SK564] gi|307618973|gb|EFN98106.1| DNA mismatch repair protein mutL [Streptococcus mitis SK564] Length = 641 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 177/628 (28%), Positives = 309/628 (49%), Gaps = 40/628 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA S+++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSNQIIIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAMDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ + P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMALVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 361 SLTNT-------------------------------QEKLFLQENRLSTNDLLPSDD--- 386 +L KL E + + D L + Sbjct: 361 TLYYEKAEVADYQVELTEEGQDLTLFAKETLDQLTKPAKLHFAERKPANYDQLDHPELDL 420 Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 + + D +E E++ + Q+H Y+ +Q DGL I+DQHAA ER+ +E+ R+ Sbjct: 421 TSLDKAYDKLEREESSRFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRES 480 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 + Q LL P I + + + E L +G+ +G N +RE P +++ Sbjct: 481 IGDVDQSQQQLLVPYIFEFPADDALRLKERMALLEEVGVFLAEYGENQFILREHPIWMAE 540 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 + I + ++ D ++ + +++ + M+C SI++ ++ +LL ++ + Sbjct: 541 EEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQ 599 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N C HGRP + SD+EK+F R Sbjct: 600 CDNPYNCPHGRPVLVHFTKSDMEKMFRR 627 >gi|322388580|ref|ZP_08062180.1| exopolyphosphatase [Streptococcus infantis ATCC 700779] gi|321140500|gb|EFX36005.1| exopolyphosphatase [Streptococcus infantis ATCC 700779] Length = 649 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 180/636 (28%), Positives = 311/636 (48%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIVEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVKLALRRHATSKIKSQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ + P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGQVEEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G VE+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLASAKKMVEIENADLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ ++IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIQIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + + ++I K++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKERELMALVSEAIAKSLKEQTLIPDALENLAKSTVRNREKVEQTTLPLREN 360 Query: 361 SLTNT---------------------------------------QEKLFLQENRLSTNDL 381 +L KL E + + D Sbjct: 361 TLYYEKNEPNRPTQAEVADHQVNLTEERQDLNLFAKETLDQMTKPAKLHFAERKTANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E E++ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASLDKAYDKLEREESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|270291963|ref|ZP_06198178.1| DNA mismatch repair protein HexB [Streptococcus sp. M143] gi|270279491|gb|EFA25333.1| DNA mismatch repair protein HexB [Streptococcus sp. M143] Length = 649 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 179/636 (28%), Positives = 309/636 (48%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + + ++I ++ ++ + ++ + + ++ +T LP Sbjct: 301 PTKQEVRISKEKELMALVSEAISNSLREQALIPDALENLAKSTVRNRQKVEQTILPLKEN 360 Query: 361 SLTNT---------------------------------------QEKLFLQENRLSTNDL 381 +L KL E + + D Sbjct: 361 TLYYEKTELSKPSQAEVADHQVELTDEGQDLTLFAKETLDQLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E E++ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASLDKAYDKLEREESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|313896663|ref|ZP_07830211.1| DNA mismatch repair family protein [Selenomonas sp. oral taxon 137 str. F0430] gi|312974580|gb|EFR40047.1| DNA mismatch repair family protein [Selenomonas sp. oral taxon 137 str. F0430] Length = 621 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 186/620 (30%), Positives = 301/620 (48%), Gaps = 33/620 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + IN+IAAGE++ERP+ +KEL+EN++DA ++ +E I GGG SF ++TDNG Sbjct: 3 RIHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGATAIEIEIMGGGTSFIRVTDNGR 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + A+ RH TSKIS D + T GFRGEALP+I +VS +L++R + G Sbjct: 63 GMERPDAETAILRHATSKISTVADLQTVGTLGFRGEALPTIASVSRFSLITRTADADLGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G K + + + GT V V DLFF PAR FLK ++ E I+D + +A++ Sbjct: 123 RVEILGGKTTEIEDAGCDVGTTVRVEDLFFNTPARKKFLKMDRTEAGKISDYVIMLALSR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE--LNEKSNEITLQGYT 237 P ++F F + + + I + G D + +++ +I + GY Sbjct: 183 PDIAFRFVNNNRLTLM---TAGDDSLRRAIESIYGGDAAGALIPLDFTDEAGDIRITGYI 239 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P+ R + +NGRT+Q++ I I Y +P +P+ VL +E+ R +DV Sbjct: 240 SKPSMIRSSRAWQTYIVNGRTIQNRAIAKAIDNVYRALVPKMGFPLAVLRIEVPQRTIDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD--------N 349 NVHP K+ ++F + I + +++Q A+ T+S+ + FH + Sbjct: 300 NVHPQKTEMKFEDEGRIFKAVYKTVQGAVRGAAGETASIAAAVEKPKFHYESMPLRMPVT 359 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND-----PVEESEATHY 404 P +P + + R ++ DL D ++ EES + Sbjct: 360 PPPASVPHTYAPTAMPAQTVHEAAQRAASADLRSVQDIVGRARSEERAALMAEESPGAYR 419 Query: 405 QL----------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 I Q+ YI++Q+T L I+DQHAAHER++F++ + I S Sbjct: 420 AEPAPAGTIESGLIPIGQVDLTYIVAQSTRALYIIDQHAAHERILFDRF--CALAEGIPS 477 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q +L I+ E I E+ E RLG + E G + E PA + ++R Sbjct: 478 QQMLVHAILSFDAREMQYIEENAELFSRLGFRMEPAGDREYRLTESPADVPTDEAEDVIR 537 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 +I+ + + + R LATMAC +I++G ++ +M LL E+ P C Sbjct: 538 EILVSLGELHAATPAELRQAG-LATMACRAAIKAGEELSFRQMEILLEELRTTPFPFTCP 596 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRPT + +D+ K+F R Sbjct: 597 HGRPTILTFDTTDLAKMFKR 616 >gi|194398020|ref|YP_002036880.1| DNA mismatch repair protein [Streptococcus pneumoniae G54] gi|238690840|sp|B5E6C5|MUTL_STRP4 RecName: Full=DNA mismatch repair protein mutL gi|194357687|gb|ACF56135.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae G54] Length = 649 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 181/636 (28%), Positives = 312/636 (49%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I + + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMALVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K S + E KL E + + D Sbjct: 361 TFYYEKTEPSRPSQTEVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASIDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|169350634|ref|ZP_02867572.1| hypothetical protein CLOSPI_01406 [Clostridium spiroforme DSM 1552] gi|169292688|gb|EDS74821.1| hypothetical protein CLOSPI_01406 [Clostridium spiroforme DSM 1552] Length = 607 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 180/607 (29%), Positives = 303/607 (49%), Gaps = 20/607 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE+IERP+ +KEL+ENS+DA S++++ +I GG + Q+ DNG Sbjct: 6 KIKQLDDIFANKIAAGEVIERPANVVKELVENSIDANSNKIDVIIEEGGLNLIQVIDNGE 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ + RH TSKI D D I T GFRGEA+PSI ++S+ L + G Sbjct: 66 GMVKEDALLCFSRHATSKIKDDQDLFCIQTLGFRGEAIPSIASISNFELKTST--GEKGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + K S GT ++V+ LF +PARL +++S E I + R+++++ Sbjct: 124 TVIYQYGKFISCDESDSKKGTDIKVKKLFQNVPARLKYIRSINAEFANIQTYLERLSLSH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SFT YK N NGN E IS + G + N + +N + +E + G+ Sbjct: 184 PDISFTLINNGKIVYKTN---GNGNLLEVISNIYGLNVAKNMIPVNFEDDEFIISGFISK 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 NR + N +N R V++K +I AY + R+P+ ++ +EIDP VDVNV Sbjct: 241 IDINRASKNHIVTMVNSRVVKNKITTDSINNAYRRYLIDKRFPIAIVNIEIDPFLVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS----------KKMISSFHQDN 349 HP+K +RF +++ + Q I A++K ++ S ++ ++M F D Sbjct: 301 HPSKLEVRFSKEYKLKDLVYQGISDALSKVNLTYSPSVTNSRPKFVPDLQQMDFEFKYDE 360 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY--SEDNDPVEESEATHYQLG 407 + L + + EN+++T + + +E + Sbjct: 361 QSNDEKIENENILDKRIYQETILENQINTINESKKEYIVPDKQTIESKLEPKPKIMKKKL 420 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 + QIH +YII + G+ IVDQHA ER+ +E + + + ++ + LL P ++ Sbjct: 421 LVKGQIHGSYIICEDETGMYIVDQHAGQERINYEYYLEKYANLDLSMRDLLVPITLEYPM 480 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 E +I E + L +LGI E FG N I+++P + + + D++ +++ + Sbjct: 481 SEFLIIEERKQILAKLGINLEIFGDNGYVIKQLPMWMQNIDEHVFIEDMVTQLLHDNKVD 540 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 ++ E+ +AT++C S+++ + M L+ + N C HGRPT I + Sbjct: 541 VIK-LQEHAIATLSCKASLKANTHLSQEGMQNLIDNLMCCDNPYVCPHGRPTIIYYSTYE 599 Query: 588 IEKLFGR 594 IEKLF R Sbjct: 600 IEKLFKR 606 >gi|328953244|ref|YP_004370578.1| DNA mismatch repair protein mutL [Desulfobacca acetoxidans DSM 11109] gi|328453568|gb|AEB09397.1| DNA mismatch repair protein mutL [Desulfobacca acetoxidans DSM 11109] Length = 586 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 187/595 (31%), Positives = 306/595 (51%), Gaps = 15/595 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L+ ++ ++IAAGE+I RP+ +KEL+EN+LDA + + I GG ++TDNG Sbjct: 3 RIGILAPEVASKIAAGEVITRPASVVKELVENALDAGARSITVEIEEGGCRQIRVTDNGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +E P+++QRH TSKI D ++ T GFRGEALPSI A+S L + SR + + G Sbjct: 63 GMWPQEAPLSLQRHATSKIRQDTDLLHLKTMGFRGEALPSIAAISRLEMCSRSRELDLGC 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G I P A GT V V DLF+ PAR FL+S+ E I ++IR +A+ Y Sbjct: 123 RLTVEGGSIREQVPWAGPAGTHVTVTDLFYNTPARRKFLRSKAAEQGRIVELIRHLALGY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + + + ER++ ++G ++ + LN + + G Sbjct: 183 PEIHLHLLAQGK---TLLHTPAHTDVRERLAALLGLEWAEKMLTLNLSGQGMRITGLVSG 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + ++ IN R V D+ ++ +R AY +P GR+PVVVL LE P QVD+NV Sbjct: 240 PDQHVATGRYQFLLINRRIVADRLLMGALRQAYQGLLPRGRHPVVVLNLEAAPDQVDINV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ +RF+ + + ++Q+A+ + ++ +S + AP Sbjct: 300 HPTKAEVRFKEGGRVYALTLSAMQQALQ-----PTQTAGRQEFASSWRPQAPNRTEEARP 354 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L L + P + P + S + Q+ + YI+ Sbjct: 355 AELFPHLPPL----PTAAVTAPQPLEPPPMPGLPEAGAPSANWRFAELKIIGQLQETYIL 410 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 +Q DGL+IVDQHAAHER++FE + Q + QTLL P ++L A ++H Sbjct: 411 AQAPDGLLIVDQHAAHERILFENLSQSW-GKSGARQTLLFPVTLELDAASAAWSIDHLPV 469 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L G++ E FG N +R +P LS +++ L ++I E+ ++ + +L T Sbjct: 470 LQAAGMELEPFGGNTFLLRTVPTCLSGQDLESLAPEMIAELSPIKSSGDGETLRRQLLLT 529 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C G+I++G+ + EM+ LL ++++ SS C HGRP + L + +I + F R Sbjct: 530 MSCRGAIKAGQSLSPEEMHHLLAQLDQLTVSSHCPHGRPLWRLLTMPEIRQNFRR 584 >gi|322412856|gb|EFY03764.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 661 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 177/648 (27%), Positives = 315/648 (48%), Gaps = 59/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE++ERP+ +KEL+EN++DA+SS++ I G +ITDNG Sbjct: 4 KIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQITIDIEESGLKMIEITDNGE 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+SE++P++++RH TSKI D I T GFRGEALPS+ ++S +T+ + ++N G+ Sbjct: 64 GMSSEDLPLSLRRHATSKIKTQSDLFRIRTLGFRGEALPSVASISKITIKTATKEDNHGS 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I ++ + GT ++V +LF+ PARL ++KS Q E I DV+ R+++A+ Sbjct: 124 LLVAIGGEIETLVETSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT + ++ S G+ + I+ + G + + ++ + + GY + Sbjct: 184 PEIAFTLISDGR---QLTQTSGTGDLRQAIAGIYGLNTAKKMIPISSADLDFEVSGYVSL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+VV+ ++IDP DVNV Sbjct: 241 PELTRANRNYMTILINGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I +I +++ ++ + ++ + S+ H +T LP + Sbjct: 301 HPTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPLQS 360 Query: 360 TSL--TNTQEKLFLQENRLST--------------------------------------- 378 L + F++E+ +S Sbjct: 361 KGLYYDPQKNDFFVKESDVSEKLPESNFHDTEIDKTVKDQRTEQFPDLGENIGFSSVKRA 420 Query: 379 ------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGL 426 + S+ +E E + + Q+H Y+ +Q DGL Sbjct: 421 SRSQDEVTDADHPGFDLKNKQKLSQMLTRLENEERSVFPELDYFGQMHGTYLFAQGKDGL 480 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 I+DQHAA ER+ +E R + Q LL P + + + + E L+ +GI Sbjct: 481 FIIDQHAAQERVKYEYYRDKIGEVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVGIF 540 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E +G N +RE P + ++ I + ++ D ++ ++ +++ + M+C SI Sbjct: 541 LEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKRSI 599 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + LL ++ + N C HGRP I +D+EK+F R Sbjct: 600 KANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRR 647 >gi|289168758|ref|YP_003447027.1| DNA mismatch repair protein hexB [Streptococcus mitis B6] gi|288908325|emb|CBJ23167.1| DNA mismatch repair protein hexB [Streptococcus mitis B6] Length = 649 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 181/636 (28%), Positives = 311/636 (48%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFEITGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMTLVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 361 SLTNTQ---------------------------------------EKLFLQENRLSTNDL 381 +L Q KL E + + D Sbjct: 361 TLYYEQTEANRSSQAEVADYQVELTDEGQDLTLFAKETLDQLTKPAKLRFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E E++ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASLDKAYDKLEREESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + I E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRIKERMALLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|323128224|gb|ADX25521.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 660 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 180/648 (27%), Positives = 314/648 (48%), Gaps = 59/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE++ERP+ +KEL+EN++DA+SS+V I G QITDNG Sbjct: 3 KIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQVTIDIEESGLKKIQITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S +T+ + ++N G+ Sbjct: 63 GMSPEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEDNHGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I ++ + GT ++V +LF+ PARL ++KS Q E I DV+ R+++A+ Sbjct: 123 LLVAIGGEIETLEETSTPVGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + ++ S G+ + I+ + G + + ++ + + GY + Sbjct: 183 PEVSFILISDGR---QLTQTSGTGDLRQAIAGIYGLNTAKKMIAISNADLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+VV+ ++IDP DVNV Sbjct: 240 PELTRANRNYMTILINGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I +I +++ ++ + ++ + S+ H +T LP + Sbjct: 300 HPTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPLQS 359 Query: 360 TSL--TNTQEKLFLQENRLST--------------------------------------- 378 L + F++E+ +S Sbjct: 360 KGLYYDPQRNDFFVKESDVSEKIPESNFHNTEIDKTVKDQRTEQFPDLGENTGFSSVKRA 419 Query: 379 ------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGL 426 L + S+ +E E + + Q+H Y+ +Q DGL Sbjct: 420 SRSQDEITDADHPGLDLKNKQKLSQMLTRLENEEQSVFPELDYFGQMHGTYLFAQGKDGL 479 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 I+DQHAA ER+ +E R + Q LL P + + + + E L+ +GI Sbjct: 480 FIIDQHAAQERVKYEYYRDKIGEVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVGIF 539 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E +G N +RE P + ++ I + ++ D ++ ++ +++ + M+C SI Sbjct: 540 LEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKRSI 598 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + LL ++ + N C HGRP I +D+EK+F R Sbjct: 599 KANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRR 646 >gi|322392517|ref|ZP_08065977.1| DNA mismatch repair protein HexB [Streptococcus peroris ATCC 700780] gi|321144509|gb|EFX39910.1| DNA mismatch repair protein HexB [Streptococcus peroris ATCC 700780] Length = 649 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 178/636 (27%), Positives = 310/636 (48%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA S+++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSNQIIVEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ + P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGQVEEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + G + I+ + G VE+ + + G+ +P Sbjct: 184 EISFSLICDGKEMTR---TAGTGQLRQAIAGIYGLASAKKMVEIENADLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + + ++I K++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKERELMALVSEAIAKSLKEQTLIPDALENLAKSTVRNREKVEQTTLPLREN 360 Query: 361 SLTNT---------------------------------------QEKLFLQENRLSTNDL 381 + KL E + ++ D Sbjct: 361 TFYYEKNEPTRPTQAEVADHQVNLTEEKQDLNLFAKEALDQMTKPAKLHFAERKPASYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E E++ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASLDKAYDKLEREESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMSLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|154686122|ref|YP_001421283.1| DNA mismatch repair protein [Bacillus amyloliquefaciens FZB42] gi|166231103|sp|A7Z4X6|MUTL_BACA2 RecName: Full=DNA mismatch repair protein mutL gi|154351973|gb|ABS74052.1| MutL [Bacillus amyloliquefaciens FZB42] Length = 624 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 184/625 (29%), Positives = 308/625 (49%), Gaps = 37/625 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K+ +LS+++ N+IAAGE++ERP+ +KEL+EN++DA S+ +E I G S ++ DNG Sbjct: 3 KVIQLSDELSNKIAAGEVVERPASVVKELVENAIDANSTVIEIDIEEAGLSSIRVLDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +++ A +RH TSKI D D + T GFRGEALPSI +VSHL + + G Sbjct: 63 GMETDDCKRAFRRHATSKIKDENDLFRVRTLGFRGEALPSIASVSHLEIKT-SIGEGAGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G I S + + GT + V +LFF PARL ++K+ E ITDV+ R+A+A+ Sbjct: 122 HLILQGGNIISEQKSSSRKGTEIIVTNLFFNTPARLKYMKTVHTELGNITDVVNRIALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VS + + NG+ ++ + G + L+ S + ++GY + Sbjct: 182 PEVSIRLRHQGK---NLLQTNGNGDVRHVLAAIYGTAVAKKMIPLHISSLDFEVKGYIAL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ ++ + Y +P+GR+P+ + + +DP VDVNV Sbjct: 239 PEITRASRNYMSSVINGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH---------QDNA 350 HP+K +R T + I I++ K+ + S+ L KK + +++A Sbjct: 299 HPSKLEVRLSKETELHELIRDGIKEVFQKQRLIPSAQLPKKSAPAPAKNEQQFMTFEESA 358 Query: 351 PKTHLPKYATSLTNTQEKLF----------------LQENRLSTNDLLPSDDPTY----- 389 P+ LP+ + + KL E L + Sbjct: 359 PERKLPEKTPEPSYSPMKLSSVVKEPEPVIIEEEILPNEADHGVPPELGMPETAAPVSDT 418 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 E EE + Q+H YI++Q +GL I+DQHAA ER+ +E R+ Sbjct: 419 PEPEAVSEEIREERVPMMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREKVGQ 478 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 + Q ++ P E +I +H +L +G+ E FG N+ +R PA K Sbjct: 479 VEPEVQDMIVPLTFHYAANEALIIDQHQHELESVGVFLEAFGTNSYIVRCHPAWFPKGEE 538 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L+ +II +++D+ ++ E M+C GSI++ R +++ E+ LL ++ + + Sbjct: 539 AELIEEIIQQVLDAKQID-IKKLREEAAIMMSCKGSIKANRHLRNDEIKALLDDLRRTTD 597 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP I ++EK+F R Sbjct: 598 PFTCPHGRPIIIHHSTYEMEKMFKR 622 >gi|307705926|ref|ZP_07642763.1| DNA mismatch repair protein mutL [Streptococcus mitis SK597] gi|307620522|gb|EFN99621.1| DNA mismatch repair protein mutL [Streptococcus mitis SK597] Length = 649 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 180/636 (28%), Positives = 311/636 (48%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + ++ +T LP Sbjct: 301 PTKQEVRISKEKELMALVSEAIANSLKEQTLIPDALENLAKSTVRNRQKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K ++ + E KL E + + D Sbjct: 361 TLYYEKTESTRPSQAEVADYQVELTEEGQDLTLFAKETLDQLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E E++ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASLDKAYDKLEREESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGDVDQSQQQLLVPYIFEFPADDALRLKERMALLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|323489620|ref|ZP_08094847.1| DNA mismatch repair protein [Planococcus donghaensis MPA1U2] gi|323396751|gb|EGA89570.1| DNA mismatch repair protein [Planococcus donghaensis MPA1U2] Length = 606 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 180/606 (29%), Positives = 300/606 (49%), Gaps = 20/606 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR + E + N+IAAGE++ERP+ +KEL+EN++DA S+ +E ++ G + QI DNG G Sbjct: 4 IRLMDEPLSNKIAAGEVVERPTSVVKELVENAIDAGSTAIEVLLIEAGLTSIQIIDNGAG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M +++ ++ RH TSKI++ D I T GFRGEAL SI +VS +TL + +G Sbjct: 64 MDADDALLSFSRHATSKIANEHDLFRIRTLGFRGEALASIASVSKVTLHT--SNGESGTF 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G +++ R ++ GT +++ LFF PARL ++K+ Q E D++ R A++YP Sbjct: 122 VQMEGGRLTEHRAGSLRKGTDIKIDQLFFNTPARLKYMKTLQTELGHSIDLLNRFALSYP 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F + S +G ++ + G V +S++ + GY +P Sbjct: 182 GIAFKLVHDGRIILQ---TSGSGEIKRVLADIYGVAIAKKMVPFEGQSHDYKISGYASLP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +F+NGR V+ I +T+ AY +PL R P+VV+ +E DP DVNVH Sbjct: 239 EITRANKNYISLFVNGRWVKHYAIANTVHKAYHTFLPLERQPIVVMNIEGDPYLTDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK-----------MISSFHQDN 349 PAK IR + I +++++ I+ + K SSF Sbjct: 299 PAKQQIRLSKEKELMELIHETLRRTISTVVRAPVIDKPKPVKQAPTRQLDLWKSSFTVQE 358 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 A + + +Y+ ++ + Q+ D + ++ + ++ + + Sbjct: 359 AKEEPVQRYSEVPVEQEKVVVPQDKERVQQDFPTIEQTPAVQEYEEEQQEQGPQFPELEV 418 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS-TKITSQTLLTPEIIDLLEG 468 QIH YI++Q+ DG ++DQHAA ER+ +E R+ Q LL P Sbjct: 419 VGQIHGTYIVAQSNDGFYLIDQHAAQERIKYEYFREKVGDIDSNERQALLLPLTFHYSRD 478 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 E + +H L G+ E FG + +RE P K +++ D+I++I+ Sbjct: 479 EALRLKDHLPVLTDSGVFLEEFGDTSFIVREYPTWFPKGFEQEVIEDLIEQILTERKVD- 537 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 ++ E+ M+C SI++ +Q EM RLL +++K C HGRP I K D+ Sbjct: 538 VKKLREDAAIMMSCKRSIKANHFLQKHEMERLLMDLKKAEQPFTCPHGRPVIIHFKTYDV 597 Query: 589 EKLFGR 594 EK+F R Sbjct: 598 EKMFKR 603 >gi|331267171|ref|YP_004326801.1| DNA mismatch repair protein MutL [Streptococcus oralis Uo5] gi|326683843|emb|CBZ01461.1| DNA mismatch repair protein MutL [Streptococcus oralis Uo5] Length = 649 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 179/636 (28%), Positives = 309/636 (48%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGQVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEITGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + + ++I ++ ++ + ++ + + ++ +T LP Sbjct: 301 PTKQEVRISKERELMALLSEAISNSLKEQALIPDALENLAKSTVRNRQKVEQTILPLKEN 360 Query: 361 SLTNT---------------------------------------QEKLFLQENRLSTNDL 381 +L KL E + + D Sbjct: 361 TLYYEKTELSKPSQAEVADHQVELTEEGRDLTLFAKETLDQLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E E++ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASLDKAYDKLEREESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|169827226|ref|YP_001697384.1| DNA mismatch repair protein [Lysinibacillus sphaericus C3-41] gi|168991714|gb|ACA39254.1| DNA mismatch repair protein [Lysinibacillus sphaericus C3-41] Length = 614 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 176/617 (28%), Positives = 291/617 (47%), Gaps = 35/617 (5%) Query: 7 SEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSE 66 E + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ + G + Q+ DNG GM E Sbjct: 2 DEWLSNKIAAGEVVERPASVVKELVENAIDAGSTSIDVFLLEAGLTSIQVIDNGSGMDEE 61 Query: 67 EIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAIS 124 + M+ RH TSKI D I T GFRGEAL SI +VS +TL++ +G + + Sbjct: 62 DAIMSFSRHATSKIHQEHDLFRIRTLGFRGEALASIASVSKMTLIT--SNGESGTHLELE 119 Query: 125 GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF 184 G + + +P + GT + V LFF PARL ++K+ Q E D++ R+A++ P+++F Sbjct: 120 GGHMLTHKPGPLRKGTDLTVSQLFFNTPARLKYMKTIQTELGHTIDLMNRLALSNPQIAF 179 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNR 244 + + G+ + ++ + G V +S++ + GY +P R Sbjct: 180 RLLHNGQI---LLQTNGRGDVQQVLAAIYGVHNAKKMVSFQGESHDYRISGYVTLPEVTR 236 Query: 245 GNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKS 304 + N +F+NGR V+ + I AY +P+ R+P+VVL +E DP DVNVHPAK Sbjct: 237 ASKNYMSLFVNGRWVKHYLVQKAIVDAYHTYLPIERFPIVVLYIEGDPYLTDVNVHPAKH 296 Query: 305 YIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY------ 358 IR + I ++I++ I +K++ + PK Sbjct: 297 QIRLSKEPELLKLIEETIRERIRSVIRVPQMEKKEKIVKPATEQLNIWKPAPKIDVEKMN 356 Query: 359 ---------ATSLTNTQEKLFLQEN-----------RLSTNDLLPSDDPTYSEDNDPVEE 398 T N +E E S + + D V+E Sbjct: 357 AIVEKLYDVQTIRENQRETPVEPEPVSTIVKDYGQTTPSLEAEEIEEITITEQHEDLVDE 416 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS-TKITSQTL 457 + + QIH YI++Q DG ++DQHAA ER+ +E R+ Q L Sbjct: 417 TGKEPFPELEVVGQIHGTYIVAQMEDGFYLIDQHAAQERIKYEFFREKVGQVNPHERQAL 476 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P E L+ EH ++L +G+ E FG ++ +RE P+ + +++ D+I Sbjct: 477 LLPLTFHYAADEALLLREHKQELEAVGVFLEEFGQSSFVVREHPSWFPQGEEQEIIEDLI 536 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 ++++ + ++ E M+C SI++ + +M LLR++ K N C HGR Sbjct: 537 EQVLTTKKAD-IKKLREAAAIMMSCKKSIKANYYLTKEQMEILLRDLRKADNPFTCPHGR 595 Query: 578 PTFIKLKLSDIEKLFGR 594 P I ++EK+F R Sbjct: 596 PVLIHFTSYEVEKMFKR 612 >gi|118443055|ref|YP_878179.1| DNA mismatch repair protein [Clostridium novyi NT] gi|166232086|sp|A0Q0M7|MUTL_CLONN RecName: Full=DNA mismatch repair protein mutL gi|118133511|gb|ABK60555.1| DNA mismatch repair protein hexb [Clostridium novyi NT] Length = 645 Score = 495 bits (1274), Expect = e-137, Method: Composition-based stats. Identities = 199/645 (30%), Positives = 332/645 (51%), Gaps = 56/645 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LSE+ N+IAAGE++ERP+ +KEL+ENS+DA + + I GK +I+D+G Sbjct: 3 RINVLSEETSNKIAAGEVVERPASVVKELVENSIDANAKNITIEIKESGKDSIKISDDGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +I A H TSKIS +D +I+TFGFRGEALPSI AVS++ L S+ ++ G Sbjct: 63 GIHPNDIEKAFMPHGTSKISLIEDLYSINTFGFRGEALPSIAAVSNVLLKSKTMDSDFGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I +SG +I+ ++ A N GT++ V +LFF +PAR FLKS++ E++LI+++I R+A+A Sbjct: 123 EILVSGGRINHIKDTACNIGTVISVENLFFNVPAREKFLKSDRRESSLISNIINRLALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 +SF + T S + I + G++ N + E S+ +++ GY G Sbjct: 183 HNISFKYYTNNKKTLMTYASS---DVKNTIRSIYGKNIYENIISFEEHSDIVSVYGYIGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 +RG+ N +F+N R ++ I + + A+ + ++P VL ++I P +DVNV Sbjct: 240 SEISRGSRNNQSIFVNKRYIKSGTITAAVENAFKSFSTVNKFPFFVLFVDIYPEFIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST------SSVLSKKMISSFHQDNAPKT 353 HP KS ++F++ II + ++ A++ + S K + QD PK Sbjct: 300 HPTKSEVKFQDERIIYKVVFDAVHSALSTSIKESFNINKDSIFDDKDTTYNLIQDETPKQ 359 Query: 354 -------------------HLPKYATSLTNTQEKLFLQEN--------------RLSTND 380 +LPK+ +++ + K +EN L T D Sbjct: 360 EQVQIPIDLQNKRSDSIIENLPKFNPNVSYEKPKDSCRENCLNSIDINLKNTTEELKTKD 419 Query: 381 LLPSDDPTYSEDNDPVEESEATH-----------YQLGIACAQIHQNYIISQTTDGLVIV 429 + + + S ++ + E + + Q ++ YI++++ D ++ Sbjct: 420 IYYENSISASPKDNILCEKSQSKNIDNYNTIEAKFPRLNILGQFNKTYILAESLDTFYMI 479 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQHAAHE+++FEK + + + SQ LLTP II++ + A E+ H G E Sbjct: 480 DQHAAHEKILFEKFKNQIENRDVISQILLTPVIIEMSAEDFAYYSENINIFHESGFVTEV 539 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 FG N I+IRE P +L K + +I D+I + + N+++++AC +I++ Sbjct: 540 FGDNIISIREAPMLLGKVSTKDFFLEIFDDIKNMGNG-NIAKIKHNMISSLACKAAIKAN 598 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + EMN L+ ++ C HGRPT IKL L +IEK F R Sbjct: 599 HTLSYEEMNSLIEDLRYIEEPFNCPHGRPTIIKLTLKEIEKKFKR 643 >gi|302874907|ref|YP_003843540.1| DNA mismatch repair protein MutL [Clostridium cellulovorans 743B] gi|307690473|ref|ZP_07632919.1| DNA mismatch repair protein MutL [Clostridium cellulovorans 743B] gi|302577764|gb|ADL51776.1| DNA mismatch repair protein MutL [Clostridium cellulovorans 743B] Length = 658 Score = 495 bits (1274), Expect = e-137, Method: Composition-based stats. Identities = 181/658 (27%), Positives = 327/658 (49%), Gaps = 69/658 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L N+IAAGE++ERP +KE++ENS+D+ ++++ I GG++ +ITD+G Sbjct: 3 RINLLDNNTSNKIAAGEVVERPLSVVKEMMENSIDSGATKITIEILDGGETLIRITDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A H TSKI DD + + GFRGEAL SI +V+ + L ++ + G Sbjct: 63 GIHPEDVEKAFLPHATSKIETIDDLYKLKSLGFRGEALASIASVAKVNLKTKIGSEDFGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G +I + N GT++EVRD+F+ +PAR FLKS+Q E LI+D++ R+A+AY Sbjct: 123 EIEIHGGEIKYLNSCGCNKGTVIEVRDIFYNVPARKKFLKSKQREAALISDIVSRIALAY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF F + + G + I + G++ + N + +++ GY G Sbjct: 183 PNISFKFFSNNK---NVLTTFGTGQLTDTIRNIYGKNVVENLSFFEGHGDIVSIYGYIGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 +RG+ N +F+N R +++K I + + A + +YP ++ L+I P +DVNV Sbjct: 240 SELSRGSRNNQSIFVNNRFIKNKLIATAVENAVKSFFMVNKYPFFIIFLDIYPEFLDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK-------------------------KGISTS 334 HP K+ I+F++ + I + +I K + + Sbjct: 300 HPTKAEIKFQDESRIFKIVFDTIHKVVRDLVKDDFLETDKEEINEKPIMQVKLPVDLKAP 359 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQE--------------------------- 367 + ++ +++S +++ +L +QE Sbjct: 360 EIPTEVLVNSNNKNPKENNYLDYQILQNDKSQETQKQDNIRIDSAQEKDTLWNTTISQDV 419 Query: 368 --KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG 425 ++ ++EN ++T+ S + + ++ + EE + II Q ++ Sbjct: 420 NSEIAVKENEINTSYNKSSVEESVAKVSIEKEEVNDFTNSEIKPVEKFPMMRIIGQYSNT 479 Query: 426 LVIV---------DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 +++ DQHAAHE++IFEK ++ +K+ SQ L+ PE+I++ + ++ E+ Sbjct: 480 YILMEGYDGLYLVDQHAAHEKIIFEKYIKEMKLSKVVSQILMLPEVIEMTPYDFSIYKEN 539 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E + G E FG N +++RE+P L + + +L +I+D + + + TL+ + I Sbjct: 540 HEMFTKAGFLIEDFGENTVSVREVPVFLGRPVVKELFTNILDNLKNYGSGSTLEVKYYKI 599 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AT+AC +I++ + EM L+ E+ C HGRPT IK+ ++IEK F R Sbjct: 600 -ATLACKSAIKANDNLDIREMIALIEELRFIDEPFNCPHGRPTIIKMTNNEIEKRFKR 656 >gi|149175950|ref|ZP_01854567.1| DNA mismatch repair protein [Planctomyces maris DSM 8797] gi|148845104|gb|EDL59450.1| DNA mismatch repair protein [Planctomyces maris DSM 8797] Length = 648 Score = 495 bits (1274), Expect = e-137, Method: Composition-based stats. Identities = 177/639 (27%), Positives = 311/639 (48%), Gaps = 50/639 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L +IN+IAAGE+IERP+ A+KEL++NS+DA ++R+E I GG ++ DNG Sbjct: 12 RIHQLDTSVINKIAAGEVIERPASAVKELLDNSIDALATRIEVDIMNGGADLIRVVDNGE 71 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +AV + TSKIS DD ++ T GFRGEAL SI VSH + +R + G Sbjct: 72 GIHPDDLLLAVASNATSKISTADDLFSVQTMGFRGEALASISEVSHFRIRTRTADQSQGL 131 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + +P GT +EVR LF P R FLK+ + E I++ R A+A+ Sbjct: 132 EFEVKTGIPGKPQPCGCPLGTAIEVRQLFANTPVRRKFLKTTKTEFGHISEQFTRAALAH 191 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + + + N +R+ G + ++ + ++I + GY Sbjct: 192 PRLYMVLRHNNKVIFDL---PPSDNLLDRLRLFYGSKLAEQLIWVDSEVDDIRIWGYVSH 248 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ N+ Y+F+NGR +QD+ + + AY + +GR P+ L L++ QVDVNV Sbjct: 249 PSENKSTRKGQYLFLNGRWIQDRTLQHALTEAYRGLLMVGRQPISFLYLDMPASQVDVNV 308 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP-------- 351 HP KS +RFR+ + ++ +++ + + L KK P Sbjct: 309 HPTKSEVRFRDGQHLYRQLLSTLRSQFLSMDLQSQMSLGKKADFDVTAPPPPLTPEQKQT 368 Query: 352 ----------------------KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 K + S T+ F + + + + + + Sbjct: 369 QMELTSWAKEQLNQVHDNLSDIKISSAPRSVSPTSDLAAPFTAADAIPLSHFQQNREQSP 428 Query: 390 SEDNDPVEESE--------------ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 E + E A + Q+ YI+ + L I+DQHA H Sbjct: 429 VELPETENEPADLVVPDIDRPADKFADVATSDLRPIQVLNCYIVVENKGALTIIDQHALH 488 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 ER+++E R+ + + +Q LL P +++ E AL+++H E L+ G+ E FG N + Sbjct: 489 ERIMYEYFRKRVLAQSVEAQKLLVPLTLEMSGKEAALLLDHAEMLNSFGLGIEEFGGNTL 548 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 I P +L K N+ QL+RDI D + D++ + +D +++++ M+C +I++G+++ Sbjct: 549 LITSYPVMLKKVNLEQLVRDIADNL-DNAKQPSRRDLLDDLITMMSCKAAIKAGQRLTQE 607 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 E+ LL + ++ C HGRP+ + L +++++ FGR Sbjct: 608 EIYSLLEQRHLIDDAHHCPHGRPSALVLSHAELDRQFGR 646 >gi|133950292|gb|ABO44018.1| MutL [Streptococcus pneumoniae] Length = 649 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 181/636 (28%), Positives = 312/636 (49%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I + + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMTLVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K S + E KL E + + D Sbjct: 361 TLYYEKTEPSRPSQTEVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASIDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|222153878|ref|YP_002563055.1| DNA mismatch repair protein [Streptococcus uberis 0140J] gi|254766178|sp|B9DW70|MUTL_STRU0 RecName: Full=DNA mismatch repair protein mutL gi|222114691|emb|CAR43777.1| DNA mismatch repair protein MutL [Streptococcus uberis 0140J] Length = 660 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 174/648 (26%), Positives = 302/648 (46%), Gaps = 59/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERP+ +KEL+EN++DA S ++ I G +ITDNG Sbjct: 3 KIIELPEILANQIAAGEVIERPASVVKELVENAIDANSRQITIEIEESGLKSIKITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E +P+++ RH TSKI D I T GFRGEALPSI ++S L + + + G+ Sbjct: 63 GMSEENLPLSILRHATSKIKNQSDLFRIRTLGFRGEALPSIASISELRIETSTADSPYGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I ++ GT + V +LF+ PARL ++KS Q E I DV+ R+++ + Sbjct: 123 LLVAKGGQIERQEVISTPVGTKITVENLFYNTPARLKYMKSLQSELAHIVDVVNRLSLGH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSFT K S G+ + I+ + G + +E++ + + GY + Sbjct: 183 PEVSFTLICDGREMTK---TSGTGDLKQAIAGIYGLNTAKKMIEISNADLDFEVSGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P+VV+ ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I +I +++ + + ++ + + +T LP + Sbjct: 300 HPTKQEVRISKEKELMALISTAIAESLKSQDLIPDALENLAKSTVRSSTKYEQTKLPLQS 359 Query: 360 TSL--TNTQEKLFLQENRLST--------------------------------------- 378 + L + +++E + +T Sbjct: 360 SKLYFDPQKNDFYIKEPQKTTELTVSEESPNFTLYTNIDNTVKEDRNLDQTSASASVKHA 419 Query: 379 ------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGL 426 +L ++ + +E + + + Q+H Y+ +Q DGL Sbjct: 420 SRSQDENQLSEHPNLDFTNKQKMEQLISKLENEKTSTFPELDFFGQMHGTYLFAQGKDGL 479 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 I+DQHAA ER+ +E R + Q LL P + + + + E L+ +GI Sbjct: 480 FIIDQHAAQERVKYEYYRDKIGKVDTSLQQLLVPYLFEFSGADFIQLQEKMSFLNEVGIF 539 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E +G N +RE P + + I + ++ D ++ ++ +++ + M+C SI Sbjct: 540 LEPYGMNTFILREHPIWMKESEIESGVYEMCDMLLLTNQV-SIKTYRAELAIMMSCKRSI 598 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + LL ++ + N C HGRP + +D+EK+F R Sbjct: 599 KANHALDDYSARHLLEQLSQCQNPYNCPHGRPVLVHFTKADMEKMFRR 646 >gi|301793453|emb|CBW35826.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae INV104] Length = 649 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 181/636 (28%), Positives = 313/636 (49%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG+G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDNGYG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I + + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMTLVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K S + E KL E + + D Sbjct: 361 TLYYEKTEPSRPSQTEVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASIDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|307126400|ref|YP_003878431.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae 670-6B] gi|133950174|gb|ABO44014.1| MutL [Streptococcus pneumoniae] gi|183393274|gb|ACC61797.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|306483462|gb|ADM90331.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae 670-6B] Length = 649 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 182/636 (28%), Positives = 312/636 (49%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMTLVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K S + E KL E + + D Sbjct: 361 TLYYEKTEPSRPSQTEVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASIDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|168493871|ref|ZP_02718014.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae CDC3059-06] gi|169833770|ref|YP_001693695.1| DNA mismatch repair protein [Streptococcus pneumoniae Hungary19A-6] gi|238688359|sp|B1I8F2|MUTL_STRPI RecName: Full=DNA mismatch repair protein mutL gi|168996272|gb|ACA36884.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae Hungary19A-6] gi|183576093|gb|EDT96621.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae CDC3059-06] Length = 649 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 181/636 (28%), Positives = 312/636 (49%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I + + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMTLVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K S + E KL E + + D Sbjct: 361 TLYYEKTEPSRPSQTEVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASIDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKKV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|322375073|ref|ZP_08049587.1| DNA mismatch repair protein HexB [Streptococcus sp. C300] gi|321280573|gb|EFX57612.1| DNA mismatch repair protein HexB [Streptococcus sp. C300] Length = 649 Score = 494 bits (1273), Expect = e-137, Method: Composition-based stats. Identities = 180/636 (28%), Positives = 308/636 (48%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAMDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G + + + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLASAKKMIAIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + + ++I ++ ++ + ++ + + ++ +T LP Sbjct: 301 PTKQEVRISKERELMALVSEAISNSLKEQSLIPDALENLAKSTVRNRQKVEQTILPLKEN 360 Query: 361 SLTNT---------------------------------------QEKLFLQENRLSTNDL 381 +L KL E + + D Sbjct: 361 TLYYEKTELSKPSQAEVADHQVELTEEGRDLTLFAKETLDQLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + N D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASLNKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMALLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|56419842|ref|YP_147160.1| DNA mismatch repair protein [Geobacillus kaustophilus HTA426] gi|81819748|sp|Q5L0E4|MUTL_GEOKA RecName: Full=DNA mismatch repair protein mutL gi|56379684|dbj|BAD75592.1| DNA mismatch repair protein [Geobacillus kaustophilus HTA426] Length = 630 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 179/631 (28%), Positives = 296/631 (46%), Gaps = 43/631 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IRKL + + N+IAAGE++ERP+ +KEL+EN++DA S+ + + G + ++ DNG Sbjct: 3 RIRKLDDLLANKIAAGEVVERPASVVKELVENAIDAHSTVINIELEEAGMAKIRVIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A +RH TSKI D D I T GFRGEALPSI +VS + L + G Sbjct: 63 GMEEDDCLLAFERHATSKIHDEHDLFRIRTLGFRGEALPSIASVSEVELT-TGTGSGPGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G + S A GT + V +LFF PARL ++K+ E DV+ R+A+A+ Sbjct: 122 KLVLQGGALVSRERAAGRKGTDITVSNLFFNTPARLKYMKTIHTELGHAADVVNRLALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF + + +G+ ++ + G + + + +S + T++GY Sbjct: 182 PDVSFRLRHQGK---TLLATNGSGDVRHVLAAIYGAETARQMIPIEAESLDFTIRGYISP 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR V+ ++ I Y +P+GRYP+V L +E+DP VDVNV Sbjct: 239 PDVTRASRNYISLVVNGRYVRSVPLMKAIEAGYHTLLPIGRYPIVFLSIEMDPVLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI-SSFHQDNAPKTHLPKY 358 HPAK +RF + + +I++A K+ + S KM Q TH + Sbjct: 299 HPAKLEVRFSKEAELNELVTDAIRQAFRKRTLIPSVSADSKMAKPKAEQAAWTFTHRVRE 358 Query: 359 ATSLTN---------------TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 + L++ T + + + D D EE Sbjct: 359 PSVLSSDIGGGEDATAPLAPLTGDAPAERPSAAVQTDECGILDEHGPAFERKQEEEVGEE 418 Query: 404 YQ--------------------LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 Q+H YI+++ GL ++DQHAA ER+ +E Sbjct: 419 RCSPRLPTDGQAEDKAAADRLPPLYPIGQLHGTYILAENEHGLYMIDQHAAQERINYEYF 478 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 R+ Q LL P + + E I ++L R G+ E FGP A +R P Sbjct: 479 REKLGEATKEVQELLVPLMFEYPADEYERIAACRDELARCGVFLEPFGPRAFLVRSHPTW 538 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 K +++ ++I++++ + T ++ E M+C +I++ + ++ E+ LL Sbjct: 539 FPKGREREIIEEMIEQVLAAKTVD-IKQLREQAAILMSCKRAIKANQHLRQDELFALLEA 597 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + + C HGRP + +IEKLF R Sbjct: 598 LRQTTDPFTCPHGRPIIVHFSTYEIEKLFKR 628 >gi|184154990|ref|YP_001843330.1| DNA mismatch repair protein [Lactobacillus fermentum IFO 3956] gi|227514528|ref|ZP_03944577.1| DNA mismatch repair protein MutL [Lactobacillus fermentum ATCC 14931] gi|260663385|ref|ZP_05864276.1| DNA mismatch repair protein HexB [Lactobacillus fermentum 28-3-CHN] gi|238692956|sp|B2GB18|MUTL_LACF3 RecName: Full=DNA mismatch repair protein mutL gi|183226334|dbj|BAG26850.1| DNA mismatch repair protein HexB [Lactobacillus fermentum IFO 3956] gi|227087085|gb|EEI22397.1| DNA mismatch repair protein MutL [Lactobacillus fermentum ATCC 14931] gi|260552237|gb|EEX25289.1| DNA mismatch repair protein HexB [Lactobacillus fermentum 28-3-CHN] gi|299782995|gb|ADJ40993.1| DNA mismatch repair protein mutL [Lactobacillus fermentum CECT 5716] Length = 647 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 177/633 (27%), Positives = 298/633 (47%), Gaps = 45/633 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + +QIAAGE+IERP+ +KEL ENSLDA S R++ ++ G ++ D+G Sbjct: 3 KIHELDSVLADQIAAGEVIERPASIVKELAENSLDANSHRIDIIVEEAGLKSVRVIDDGQ 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A RH TSKI+D D + T GFRGEALPSI +V+ + L + G+ Sbjct: 63 GIEADDVARAFLRHATSKIADKGDLFKVTTMGFRGEALPSIASVADVLLTTATGGAA-GS 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI I G +I + + PGT + V DLF+ PARL +LKS E I D++ R+A+A Sbjct: 122 QIHIKGGEILAHGQASARPGTDILVSDLFYNTPARLKYLKSPHTELARIVDIVNRLALAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F+ + ++ + NGN + ++ + G VE+ + + G + Sbjct: 182 PTVAFSLTHDGKEVFR---SAGNGNLKQVVAAIYGVQAGRKMVEVKGEDPNFKVSGLVSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + IN R V++ + + Y + +GRYP+ V+ +++DP VDVNV Sbjct: 239 PELTRAGRQYMTIMINHRYVRNFQLTKALVAGYRSKLMVGRYPLAVINIDLDPVLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST------------SSVLSKKMISSFHQ 347 HPAK +R + + + + + +AI+++ + + ++ Sbjct: 299 HPAKREVRLSMEPQLVDLLERVVSQAIDQQNLIPDVGDRADELLTREQTVHAPRSAAPRV 358 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----------------DPTYSE 391 P + S T+ + + + + L++ + D D S+ Sbjct: 359 SERASDEPPAWQPSPTSGEPVIISRRSELASPAVQAFDRRYQNEEVATPFGAQADAKVSQ 418 Query: 392 DNDPVEESEATHYQLG----------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 VE+ G Q+H Y+++Q +DGL IVDQHAA ER+ +E Sbjct: 419 AQPAVEQVSLDIDDRGDVASERFPDLTYLGQLHGTYLLAQASDGLYIVDQHAAQERINYE 478 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 R++ Q LTP +++ + I +H L G+K E FG N+ + P Sbjct: 479 YYREEIGKVSADQQNFLTPLVLNYSLADALKIQQHQAVLAACGLKLEPFGQNSFMLASHP 538 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 R++ID ++ S +++D M+C +I++ ++ + LL Sbjct: 539 TWFVAGQEEDTAREMIDWVLASGK-LSVKDFRAKAAIMMSCKRAIKANHRLDERQAKALL 597 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + N C HGRP I +D+EKLF R Sbjct: 598 ARLPQCENPFNCPHGRPVTIHFTTTDLEKLFKR 630 >gi|94970246|ref|YP_592294.1| DNA mismatch repair protein MutL [Candidatus Koribacter versatilis Ellin345] gi|123256270|sp|Q1ILN0|MUTL_ACIBL RecName: Full=DNA mismatch repair protein mutL gi|94552296|gb|ABF42220.1| DNA mismatch repair protein MutL [Candidatus Koribacter versatilis Ellin345] Length = 647 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 190/649 (29%), Positives = 317/649 (48%), Gaps = 61/649 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LSE + N+IAAGE++ERP+ +KELIENSLDA + R+ + GGK I D+G Sbjct: 3 RIHVLSEHVANKIAAGEVVERPASVVKELIENSLDAGAKRIRVHVEAGGKKLIHIVDDGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A +RH TSK+ +D +I T GFRGEALPSI +V+ + L +R + +G Sbjct: 63 GMFRDDAMLAFERHATSKLKNPEDLLSISTLGFRGEALPSIASVARVRLETRANEEPSGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I+G KI + + GT + ++DLFF PAR FLKSE E + I ++ A+A+ Sbjct: 123 VLEIAGGKILKIEEAGLPLGTSIAIKDLFFNTPARKKFLKSESTELSHIASLVTHYALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV----------------- 222 P++ + + + + ERI QV G + ++ + Sbjct: 183 PEMHWELHSATNA---LLIAPPVATQSERIYQVFGNETLDQLIPLAAQIKLERIGLPKPP 239 Query: 223 -----------ELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTA 271 E + E+ L G+ P + N N +VF+NGR ++D+ + + A Sbjct: 240 PWLRKNEDDEEEQTVEPGEVRLHGFISKPEIQKLNRNSIFVFVNGRLIRDRLVQHALTEA 299 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 Y +P +PVV+L LE+ +VDVNVHP+K+ +RFR +++ +F+ S++ A++K Sbjct: 300 YRNILPPTLFPVVLLFLEMPYTEVDVNVHPSKTEVRFRQQSLVHDFVRDSVRAALSKARP 359 Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP---- 387 + P QE+ L E D + + Sbjct: 360 IPQFISEIHAQPKASPSLTPGAQTA--PAFALEAQEEPVLPERLQFGGDAISVEANAAVP 417 Query: 388 ----------TYSEDNDPVEESEATHYQ------------LGIACAQIHQNYIISQTTDG 425 ++ V E+ Y+ QI +++I++ + +G Sbjct: 418 VARFGAQTFGSHVAQQQTVPETSGCDYELPDLPAADAPLASLRPLGQIRESFILATSNEG 477 Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L I+DQH AHER++FEK+ + + + +Q LL P I++L G+ A+ E E+LH+ G Sbjct: 478 LWIIDQHVAHERVLFEKVLKQRAAASVETQQLLMPLIVELTPGQQAVFTEIAEELHQNGF 537 Query: 486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 + E FG A++ PA + ++I + L +++D + L+ I AT+AC+ + Sbjct: 538 EVEPFGSRTFAVKAAPAGIRAEDIEKTLSEVLDSFEREQQAFNLEHAQSRIAATIACHAA 597 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 I+ + +M LL E+ K + C HGRP ++ + DI+K F R Sbjct: 598 IKVNMPLTQDKMEWLLAELAKTEHPMTCPHGRPIVLRYSVKDIQKAFKR 646 >gi|168492131|ref|ZP_02716274.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae CDC0288-04] gi|183573591|gb|EDT94119.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae CDC0288-04] Length = 649 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 179/636 (28%), Positives = 312/636 (49%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V +LFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVENLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFKISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I + + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMTLVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K S + E KL E + + D Sbjct: 361 TLYYEKTEPSRPSQTEVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASIDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ + + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEVESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|168486054|ref|ZP_02710562.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae CDC1087-00] gi|183570845|gb|EDT91373.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae CDC1087-00] Length = 649 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 181/636 (28%), Positives = 312/636 (49%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I + + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMALVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K S + E KL E + + D Sbjct: 361 TLYYEKTEPSRPSQTEVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASIDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|189485479|ref|YP_001956420.1| DNA mismatch repair protein MutL [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|238058939|sp|B1H0C7|MUTL_UNCTG RecName: Full=DNA mismatch repair protein mutL gi|170287438|dbj|BAG13959.1| DNA mismatch repair protein MutL [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 595 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 184/601 (30%), Positives = 304/601 (50%), Gaps = 14/601 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I LS++ +N+IAAGE++ERP A+KEL+ENSLDA +S + I GK +++DNG Sbjct: 1 MPINILSQETVNKIAAGEVVERPLNAVKELVENSLDAFASSITVEIEEAGKKLIRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 FGM +++ +++ RH TSKI D D +IH+ GFRGEAL SI AVS+ + +R N+G Sbjct: 61 FGMDKKDLELSILRHATSKIDDFKDLMHIHSLGFRGEALASIAAVSNFAIKTRKKGENSG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++++G K V P + GTI EV+ LFF PAR FLKS+ E + I + + A+A Sbjct: 121 WKLSVAGAKDIKVMPWSGAEGTITEVKSLFFNTPARQKFLKSDSTERSRIINSLEETALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +SF + + + + ERI+ ++G+DF + +I+L Y Sbjct: 181 NYDISFKIFSENKTVF---SAAQTDSKTERIADILGKDFAKTLKNIKIDHPKISLDVYFT 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFI-LSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 + N Y+F+N R V + + +Y E+IP +YP +++ ++DP ++DV Sbjct: 238 GRDNSLPNKKYQYLFVNSRPVNYPKRLMHCVYQSYKESIPRDKYPGILIYTDVDPSEIDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 N+HPAK ++F + I + + ++++ A+ +G + + + + Sbjct: 298 NIHPAKREVKFADENGIYDILFKALRNALMSQGHPEIKITYPPLDK--EKSAKQEVEGST 355 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG----IACAQI 413 Q ++ +E + N + + D + E + Q+ Sbjct: 356 APRFPKIQQPVIYAREPKPKYNYASLKQTCSIDKYADVFAKQEELTPENFDSNIKVIGQV 415 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 YII+ L I DQHAA ER+ +E S I Q +L PE DL L+ Sbjct: 416 FDTYIIASNKGDLYIFDQHAAAERVRYEFYLSQMKSQTIKIQQMLMPENFDLSPSISELL 475 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 + + LGI E FG N+ I PA+L ++ Q+++ II +I D ++ + Sbjct: 476 KANINIFNELGISIEEFGQNSFRITAYPALLGNISMEQIVKTIISDIEDDKHAE-IEQKR 534 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + I+ + AC SI++G + IE +L+ ++ K C HGRPT K+ L++IEK F Sbjct: 535 DKIIRS-ACRASIKAGDNVSFIEAKKLINDLFKCKQPFTCPHGRPTAYKISLNEIEKFFK 593 Query: 594 R 594 R Sbjct: 594 R 594 >gi|15900110|ref|NP_344714.1| DNA mismatch repair protein [Streptococcus pneumoniae TIGR4] gi|15902204|ref|NP_357754.1| DNA mismatch repair protein [Streptococcus pneumoniae R6] gi|111657934|ref|ZP_01408643.1| hypothetical protein SpneT_02000883 [Streptococcus pneumoniae TIGR4] gi|116516396|ref|YP_815684.1| DNA mismatch repair protein [Streptococcus pneumoniae D39] gi|148983575|ref|ZP_01816894.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP3-BS71] gi|148987911|ref|ZP_01819374.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP6-BS73] gi|148992754|ref|ZP_01822397.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP9-BS68] gi|148996599|ref|ZP_01824317.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP11-BS70] gi|149017847|ref|ZP_01834306.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP23-BS72] gi|168483814|ref|ZP_02708766.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae CDC1873-00] gi|168490361|ref|ZP_02714560.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae SP195] gi|168576395|ref|ZP_02722278.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae MLV-016] gi|182683158|ref|YP_001834905.1| DNA mismatch repair protein [Streptococcus pneumoniae CGSP14] gi|221231085|ref|YP_002510237.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae ATCC 700669] gi|237649752|ref|ZP_04524004.1| DNA mismatch repair protein [Streptococcus pneumoniae CCRI 1974] gi|237821450|ref|ZP_04597295.1| DNA mismatch repair protein [Streptococcus pneumoniae CCRI 1974M2] gi|298230110|ref|ZP_06963791.1| DNA mismatch repair protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255027|ref|ZP_06978613.1| DNA mismatch repair protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298501976|ref|YP_003723916.1| DNA mismatch repair protein [Streptococcus pneumoniae TCH8431/19A] gi|303255123|ref|ZP_07341199.1| DNA mismatch repair protein [Streptococcus pneumoniae BS455] gi|307066856|ref|YP_003875822.1| DNA mismatch repair protein [Streptococcus pneumoniae AP200] gi|61225739|sp|P0A3R1|HEXB_STRPN RecName: Full=DNA mismatch repair protein hexB gi|61225740|sp|P0A3R2|HEXB_STRR6 RecName: Full=DNA mismatch repair protein hexB gi|122279430|sp|Q04MR4|MUTL_STRP2 RecName: Full=DNA mismatch repair protein mutL gi|238691184|sp|B2IS10|MUTL_STRPS RecName: Full=DNA mismatch repair protein mutL gi|254766177|sp|B8ZKC9|MUTL_STRPJ RecName: Full=DNA mismatch repair protein mutL gi|14971640|gb|AAK74354.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae TIGR4] gi|15457702|gb|AAK98964.1| DNA mismatch repair protein [Streptococcus pneumoniae R6] gi|116076972|gb|ABJ54692.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae D39] gi|147757174|gb|EDK64213.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP11-BS70] gi|147923722|gb|EDK74834.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP3-BS71] gi|147926375|gb|EDK77448.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP6-BS73] gi|147928480|gb|EDK79495.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP9-BS68] gi|147931411|gb|EDK82389.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP23-BS72] gi|172042907|gb|EDT50953.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae CDC1873-00] gi|182628492|gb|ACB89440.1| DNA mismatch repair protein [Streptococcus pneumoniae CGSP14] gi|183393266|gb|ACC61793.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|183393272|gb|ACC61796.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|183571322|gb|EDT91850.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae SP195] gi|183577800|gb|EDT98328.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae MLV-016] gi|202073440|gb|ACC61792.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|202073445|gb|ACC61795.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|220673545|emb|CAR68031.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae ATCC 700669] gi|251765212|gb|ACC61794.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|298237571|gb|ADI68702.1| DNA mismatch repair protein [Streptococcus pneumoniae TCH8431/19A] gi|301799330|emb|CBW31865.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae OXC141] gi|301801125|emb|CBW33798.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae INV200] gi|302597953|gb|EFL65023.1| DNA mismatch repair protein [Streptococcus pneumoniae BS455] gi|306408393|gb|ADM83820.1| DNA mismatch repair enzyme (predicted ATPase) [Streptococcus pneumoniae AP200] gi|332075846|gb|EGI86313.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae GA17570] gi|332202095|gb|EGJ16164.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae GA41317] gi|332203336|gb|EGJ17403.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae GA47368] gi|332204187|gb|EGJ18252.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae GA47901] Length = 649 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 181/636 (28%), Positives = 312/636 (49%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I + + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMTLVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K S + E KL E + + D Sbjct: 361 TLYYEKTEPSRPSQTEVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASIDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|302038646|ref|YP_003798968.1| DNA mismatch repair protein MutL [Candidatus Nitrospira defluvii] gi|300606710|emb|CBK43043.1| DNA mismatch repair protein MutL [Candidatus Nitrospira defluvii] Length = 599 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 179/595 (30%), Positives = 316/595 (53%), Gaps = 7/595 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L +I +IAAGE++ERP+ +KEL+ENSLDA SS + + GG ++TD+G Sbjct: 9 KIQVLPSDVIGRIAAGEVVERPAAVVKELVENSLDAGSSTITVEVKDGGLGLIRVTDDGE 68 Query: 62 GMTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ + +A +RH TSK+ D I T GFRGEALPSI AVS + L + Q G Sbjct: 69 GMSRRDASLAFERHATSKLQSDQQLGAIRTMGFRGEALPSIAAVSKVRLTTLSRQEQVGT 128 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ ++ I+ V A PGT +EV +LF+ PAR FLKS E + I+ V+++ A+A Sbjct: 129 QLWLTAGTITRVEDAAAIPGTSIEVLELFYNTPARRKFLKSTTTEFSHISHVVQQAALAS 188 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V + + + +R+ QV F + A+ ++ + N ++L+G+ Sbjct: 189 PQVHMRLIHNGYEVFALPAVPSP---RDRVLQVYRAAFGDRALAVDVQQNGLSLKGFIID 245 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R +F+N R +++ + + Y+ + G P+ VL L+++P++VDVNV Sbjct: 246 PVRARAGRTPQELFVNRRPIKNSTVQHAVVDGYSSFLAKGHAPLFVLFLDVEPQRVDVNV 305 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RF + I + +++ + + I +S + + + T + + Sbjct: 306 HPTKREVRFADNEQIHQLVRSAVRHTLGRAHIESSMAGAAHAHPDGNGVSHAATSVEEAG 365 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 T F + N + + ++ + +A + Q+H+ Y+I Sbjct: 366 VEPTGLSYPPFARVNVPVPSTPSAENQTSFVR--EGAMPYQAGEAVDIVPLGQMHRTYVI 423 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 +Q D L ++DQH AHER++FE++ + + + SQ LL PE ++L + ++ H + Sbjct: 424 AQVGDELQVIDQHTAHERVLFERLLRAWQGKSLPSQPLLLPEPLELPVQQALILQRHLAE 483 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L RLG+ E FGP++ IR +P +L ++ L++D+ID++ + +L+ +++ ILA+ Sbjct: 484 LERLGLLIEPFGPSSFLIRSLPVMLGHPDLAALVQDLIDDLEQWDSISSLETKVKPILAS 543 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC+G++R+GR M E+ +L ++ + C HGR +L ++ +LF R Sbjct: 544 LACHGAVRAGRAMVLPEIKQLAQDWVAEGSIMTCPHGRRVAFRLSGDELARLFDR 598 >gi|261856601|ref|YP_003263884.1| DNA mismatch repair protein MutL [Halothiobacillus neapolitanus c2] gi|261837070|gb|ACX96837.1| DNA mismatch repair protein MutL [Halothiobacillus neapolitanus c2] Length = 617 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 196/618 (31%), Positives = 331/618 (53%), Gaps = 27/618 (4%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L +++NQIAAGE++ERP+ +KEL+EN++DA + R++ I G ++ D+ Sbjct: 1 MPHIAQLPPELVNQIAAGEVVERPASVVKELVENAIDAGARRIDVRIEEAGSRLIEVRDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ E++P+A H TSKI D+ ++ T GFRGEAL SI +++ +++ SR ++ Sbjct: 61 GSGMSEEDLPLAFAAHATSKIRSLDELESVATMGFRGEALASIASIAQVSVSSRRERDAH 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ + + RP A GT V V DLF+ PAR FL++E+ E + I ++RR A+ Sbjct: 121 GWILSPN--ESLECRPTAHPVGTTVTVADLFYNTPARRKFLRTERTEFSQIDQLMRRFAL 178 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNG---NFPERISQVIGEDFINNAVELNEKSNEITLQ 234 A+P + F+ + ++++ P RI ++G +F+N A ++ ++ ++L Sbjct: 179 AHPGIGFSLTHQGRLVFELSPLPRAQLAEQMPARIEALLGAEFLNRARRIDSAASGLSLS 238 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G+ P + R +Q F+NGR V+D+ I IR AYA+ + R P VL L+++PR Sbjct: 239 GWVADPAYARSTTDQQLFFVNGRIVRDRLIGFAIRRAYADVLHHARQPAYVLALDLEPRA 298 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI-------------STSSVLSKKM 341 VDVNVHP K+ +RFR+ +++FI + I +A+ + + + M Sbjct: 299 VDVNVHPTKAEVRFRDARAVQDFIFREIHRALAQGAVAGAQQESGVEQASRGAPAFDAGM 358 Query: 342 ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA 401 D T + ++ Q L L + L+ + + E + ++ Sbjct: 359 GRGERVDGWSGTASMPSSAPSSSVQGYLNLLAASAAAPQLVDACLSSVQEPSQ-AQQPTQ 417 Query: 402 THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 LG A A +H YI++Q GLVIVD HAA ER+ +E+++ + + ++T Q LL P Sbjct: 418 DMPPLGYAVAHLHGVYILAQNAQGLVIVDAHAAAERITYERLKAAYAAQQMTIQPLLLPV 477 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII---- 517 + E E E RLG+ R P + + + A+L + L R ++ Sbjct: 478 TFAVTESEAEQYEAQAEAFARLGVVLARVAPTRVRVTALAALLRHADAEALARALLSALS 537 Query: 518 DEIIDSSTTYT-LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 +E D L + I +L+ MAC+GS+R+ R + EM+ LLR+ME+ + QCNHG Sbjct: 538 EEEPDWGQPQAVLTEPINAVLSRMACHGSVRANRILARPEMDALLRDMERTERADQCNHG 597 Query: 577 RPTFIKLKLSDIEKLFGR 594 RPT+ +L ++D+++LF R Sbjct: 598 RPTWRQLSMTDLDRLFMR 615 >gi|149927687|ref|ZP_01915939.1| DNA mismatch repair protein [Limnobacter sp. MED105] gi|149823513|gb|EDM82743.1| DNA mismatch repair protein [Limnobacter sp. MED105] Length = 624 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 190/623 (30%), Positives = 316/623 (50%), Gaps = 35/623 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L + +I+QIAAGE+++RP+ +KEL+EN+LDA +S + I GGG I DNG Sbjct: 5 PISLLPDVLISQIAAGEVVDRPASVVKELLENALDAGASEITVRIDGGGIQRICIQDNGK 64 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+ +AV RH TSKI + ++ + GFRGEAL SI +VS TL S P + Sbjct: 65 GIPKDELELAVTRHATSKIQSLSELESVLSLGFRGEALASIASVSQFTLSSYPKGQESAY 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I+ + P +PGT V+V+ L+F+ PAR FLK+EQ E DV++RMA+A Sbjct: 125 SISNQSGRWLV-EPSPASPGTTVDVQSLYFSTPARRKFLKTEQTEFFQCLDVVKRMALAN 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V++ + + ++ R+ ++ + ++ ++ ++ L G G+ Sbjct: 184 PSVTWLVYRDGK----LQSRFQESSWSARVFSILETMANGASKPIDVQTADMQLHGAVGL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P RG + + ++NGR V+DK I +R+AY + + ++P VL L + +VDVNV Sbjct: 240 PDAARGKGDMQFFYVNGRFVKDKLIGHAVRSAYEDVLHGDKFPAFVLFLNLPATEVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI------STSSVLSKKMISSFHQDNAPKT 353 HPAK+ +RFRN + ++ QSIQ + S SSV + + Sbjct: 300 HPAKTEVRFRNARAVHQWVRQSIQACLAPSRAVVPLSDSPSSVGVSAPAIATPPATTSGS 359 Query: 354 HLPKYATSLTNTQEKLFLQE---------------------NRLSTNDLLPSDDPTYSED 392 A+S ++ ++ + S Sbjct: 360 GNVWRASSDSSPAIQVQAKSAALPFLREELADYIQAYRPLAPAQSAPRPANITAQPKMPG 419 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK- 451 N ++ LG A AQ+H YI++ DG+V+VD HAAHER+++E+ + ++ + Sbjct: 420 NTQPSQAADEAEYLGQAIAQVHGIYILALRPDGMVVVDMHAAHERVLYEQFKNALDNQQT 479 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 I+SQ LL P ++ + + + +LG + IA+R +P +L+ +++ Sbjct: 480 ISSQELLVPLLVQIDPRLASEVDHGQHLWEKLGFRLSLISTQEIAVRAVPTMLAGQDLSA 539 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 LL+ ++++ + L+ + LA +AC+ ++R+ RK+ EMN LLR ME+ S Sbjct: 540 LLQQWLEDLHQYGVAHVLERQRNEWLAGLACHTAVRANRKLTVPEMNALLRSMERTERSD 599 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+ LS+++K F R Sbjct: 600 QCNHGRPTWRHFSLSEMDKWFLR 622 >gi|225855945|ref|YP_002737456.1| DNA mismatch repair protein [Streptococcus pneumoniae P1031] gi|225860206|ref|YP_002741715.1| DNA mismatch repair protein [Streptococcus pneumoniae Taiwan19F-14] gi|254766180|sp|C1CI68|MUTL_STRZP RecName: Full=DNA mismatch repair protein mutL gi|254766181|sp|C1CP43|MUTL_STRZT RecName: Full=DNA mismatch repair protein mutL gi|225726107|gb|ACO21959.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae P1031] gi|225727696|gb|ACO23547.1| DNA mismatch repair protein MutL [Streptococcus pneumoniae Taiwan19F-14] gi|327390582|gb|EGE88922.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae GA04375] Length = 649 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 181/636 (28%), Positives = 312/636 (49%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I + + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMTLVSEAIANSLKEQTLIPDALENLAKSTVRNREKVDQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K S + E KL E + + D Sbjct: 361 TLYYEKTEPSRPSQTEVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASIDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|332076625|gb|EGI87087.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae GA17545] Length = 649 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 182/636 (28%), Positives = 312/636 (49%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMTLVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K S + E KL E + + D Sbjct: 361 TLYYEKTEPSRPSQTEVADYQVELTDEEQDLTLFAKETLDRLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASIDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|332077480|gb|EGI87941.1| DNA mismatch repair MutL family protein [Streptococcus pneumoniae GA41301] Length = 649 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 181/636 (28%), Positives = 312/636 (49%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I + + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMTLVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K S + E KL E + + D Sbjct: 361 TLYYEKTEPSRPSQTEVADYQVELTDEGQDLALFAKETLDRLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASIDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRSELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|73921024|sp|Q5X9H5|MUTL_STRP6 RecName: Full=DNA mismatch repair protein mutL Length = 660 Score = 494 bits (1271), Expect = e-137, Method: Composition-based stats. Identities = 176/650 (27%), Positives = 317/650 (48%), Gaps = 60/650 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L E + NQIAAGE++ERP+ +KEL+EN++DA+SS++ I G Q+TDN Sbjct: 1 MTNIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQITVEIEESGLKMIQVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S +T+ + + Sbjct: 61 GEGMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTH 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G+ + +G +I ++ ++ GT ++V +LF+ PARL ++KS Q E I DV+ R+++ Sbjct: 121 GSLLIATGGEIETLEAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P+V+FT + ++ S G+ + I+ + G + + ++ + + GY Sbjct: 181 AHPEVAFTLISDGR---QLTQTSGTGDLRQAIAGIYGLNTTKKMLAISNADLDFEVSGYV 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P R N N + +NGR +++ + I Y + +GR+P+VV+ ++IDP DV Sbjct: 238 SLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +R + I +I +++ ++ + ++ + S+ H +T LP Sbjct: 298 NVHPTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPL 357 Query: 358 YATSL--TNTQEKLFLQENRLST------------------------------------- 378 + L + F++E+ +S Sbjct: 358 QSRGLYYDPQKNDFFVKESAVSEKIPETDFYFGAVDNSVKVEKAELLPHSEEVIGPSSVK 417 Query: 379 --------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 +L + S+ + +E E + + Q+H Y+ +Q D Sbjct: 418 HASRPQNTFTETDHPNLDLKNRQKLSQMLNRLENEEKSVFPELDYFGQMHGTYLFAQGKD 477 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL I+DQHAA ER+ +E R + Q LL P + + + + E L+ +G Sbjct: 478 GLFIIDQHAAQERVKYEYYRDKIGEVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVG 537 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 I E +G N +RE P + ++ I + ++ D ++ ++ +++ + M+C Sbjct: 538 IFLEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKR 596 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ + LL ++ + N C HGRP I +D+EK+F R Sbjct: 597 SIKANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRR 646 >gi|21911341|ref|NP_665609.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS315] gi|28896715|ref|NP_803065.1| DNA mismatch repair protein [Streptococcus pyogenes SSI-1] gi|25090724|sp|Q8K5J6|MUTL_STRP3 RecName: Full=DNA mismatch repair protein mutL gi|21905556|gb|AAM80412.1| putative DNA mismatch repair protein [Streptococcus pyogenes MGAS315] gi|28811969|dbj|BAC64898.1| putative DNA mismatch repair protein [Streptococcus pyogenes SSI-1] Length = 660 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 176/650 (27%), Positives = 316/650 (48%), Gaps = 60/650 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L E + NQIAAGE++ERP+ +KEL+EN++DA+SS++ I G Q+TDN Sbjct: 1 MTNIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQITVEIEESGLKMIQVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S +T+ + + Sbjct: 61 GEGMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTH 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G+ + +G +I ++ ++ GT ++V +LF+ PARL ++KS Q E I DV+ R+++ Sbjct: 121 GSLLIATGGEIETLEAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P+V+FT + ++ S G+ + I+ + G + + ++ + + GY Sbjct: 181 AHPEVAFTLISDGR---QLTQTSGTGDLRQAIAGIYGLNTTKKMLAISNADLDFEVSGYV 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P R N N + +NGR +++ + I Y + +GR+P+VV+ ++IDP DV Sbjct: 238 SLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +R + I +I +++ ++ + ++ + S+ H +T LP Sbjct: 298 NVHPTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPL 357 Query: 358 YATSL--TNTQEKLFLQENRLST------------------------------------- 378 + L + F++E+ +S Sbjct: 358 QSRGLYYDPQKNDFFVKESAVSEKIPETDFYFGTVDNSVKVEKAELLPHSEEVIGPSSVK 417 Query: 379 --------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 +L + S+ +E E + + Q+H Y+ +Q D Sbjct: 418 HASRPQNTFTETDHPNLDLKNRQKLSQMLTRLENEEQSVFPELDYFGQMHGTYLFAQGKD 477 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL I+DQHAA ER+ +E R + Q LL P + + + + E L+ +G Sbjct: 478 GLFIIDQHAAQERVKYEYYRDKIGEVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVG 537 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 I E +G N +RE P + ++ I + ++ D ++ ++ +++ + M+C Sbjct: 538 IFLEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKR 596 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ + LL ++ + N C HGRP I +D+EK+F R Sbjct: 597 SIKANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRR 646 >gi|319936494|ref|ZP_08010910.1| DNA mismatch repair protein mutL [Coprobacillus sp. 29_1] gi|319808609|gb|EFW05161.1| DNA mismatch repair protein mutL [Coprobacillus sp. 29_1] Length = 611 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 175/613 (28%), Positives = 292/613 (47%), Gaps = 26/613 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR+L + + N+IAAGE++ERPS +KEL+ENS+DA ++R+E I GG ++ DNG Sbjct: 3 KIRQLDDVLSNKIAAGEVVERPSSVVKELVENSVDAGATRIEVFIEDGGLQKIKVVDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ + RH TSKI D D NI T GFRGEA+PSI +VSH L + + G Sbjct: 63 GMAREDARLCFSRHATSKIKDDHDLFNIMTLGFRGEAIPSIASVSHFDLRTSTGEE--GT 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + K + GT + V LF +PARL +LKS E I + R+A+AY Sbjct: 121 YVQYEFGKYKDEGICDLPRGTQMTVTKLFQNVPARLKYLKSVNSEFASIHQYVERIALAY 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++ T ++ N GN E I+ + G N + ++ +++E + GY Sbjct: 181 PTIAITLYHNDKMIFQTN---GKGNLLEVIASMFGVSTAKNMLPISLENDEFEMSGYISK 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 +R + +N R V++ + I +AY + RYP+ V+ +E+DP VDVNV Sbjct: 238 IDTSRASKTNIITLVNHRYVKNAMSIDAINSAYRAYLADNRYPIAVINIEVDPYLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP+K +RF +R+ I + A+ + ++ + +F T Sbjct: 298 HPSKLEVRFSKEYELRDLIYNGVLDALQQVDLTYQVKNKQTERETFKPQLDQVTFDLPEE 357 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG------------ 407 + Q + + T DL+ ++ + +++ + Sbjct: 358 KPIVYIQPAVQSVSHDSQTTDLIDEQYANMVQEEKVIYQNDEMSCKSLEKTTSHETFQQK 417 Query: 408 ------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 A QIH Y+I + G+ +VDQHAA ER+ +E ++ F+ +T Q LL P Sbjct: 418 PIKEKIYAKTQIHGTYLIGENEKGMYMVDQHAAQERINYEYYKEQFSHLDLTMQPLLVPL 477 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 + E ++ E L ++GI E FG + +R +P + K + + +++ EI+ Sbjct: 478 QFEYPMSEFLILEERKGILEKVGINLEVFGEHGYILRNLPLWMKKIDENIFVDEMVQEIL 537 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 + + E+ +AT++C S+++ + +M + + + N C HGRPT + Sbjct: 538 KKNHLDVV-ALQEHAIATLSCKASLKANTYLSPSDMQTIFDNLMRCENPYVCPHGRPTIL 596 Query: 582 KLKLSDIEKLFGR 594 ++EKLF R Sbjct: 597 FYSDYELEKLFKR 609 >gi|94989445|ref|YP_597546.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS9429] gi|94993334|ref|YP_601433.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS2096] gi|123257691|sp|Q1J9C2|MUTL_STRPB RecName: Full=DNA mismatch repair protein mutL gi|123258098|sp|Q1JJH1|MUTL_STRPC RecName: Full=DNA mismatch repair protein mutL gi|94542953|gb|ABF33002.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS9429] gi|94546842|gb|ABF36889.1| DNA mismatch repair protein mutL [Streptococcus pyogenes MGAS2096] Length = 660 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 176/650 (27%), Positives = 317/650 (48%), Gaps = 60/650 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L E + NQIAAGE++ERP+ +KEL+EN++DA+SS++ I G Q+TDN Sbjct: 1 MTNIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQITVEIEESGLKMIQVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S +T+ + + Sbjct: 61 GEGMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTH 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G+ + +G +I ++ ++ GT ++V +LF+ PARL ++KS Q E I DV+ R+++ Sbjct: 121 GSLLIATGGEIETLEAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P+V+FT + ++ S G+ + I+ + G + + ++ + + GY Sbjct: 181 AHPEVAFTLISDGR---QLTQTSGTGDLRQAIAGIYGLNTTKKMLVISNADLDFEVSGYV 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P R N N + +NGR +++ + I Y + +GR+P+VV+ ++IDP DV Sbjct: 238 SLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +R + I +I +++ ++ + ++ + S+ H +T LP Sbjct: 298 NVHPTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPL 357 Query: 358 YATSL--TNTQEKLFLQENRLST------------------------------------- 378 + L + F++E+ +S Sbjct: 358 QSRGLYYDPQKNDFFVKESAVSEKIPETDFYSGAVDNSVKVEKAELLPHSEEVIGPSSVK 417 Query: 379 --------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 +L + S+ + +E E + + Q+H Y+ +Q D Sbjct: 418 HASRPQNTFTETDHPNLDLKNRQKLSQMLNRLENEEQSVFPELDYFGQMHGTYLFAQGKD 477 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL I+DQHAA ER+ +E R + Q LL P + + + + E L+ +G Sbjct: 478 GLFIIDQHAAQERVKYEYYRDKIGDVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVG 537 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 I E +G N +RE P + ++ I + ++ D ++ ++ +++ + M+C Sbjct: 538 IFLEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKR 596 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ + LL ++ + N C HGRP I +D+EK+F R Sbjct: 597 SIKANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRR 646 >gi|50915149|ref|YP_061121.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS10394] gi|50904223|gb|AAT87938.1| MutL [Streptococcus pyogenes MGAS10394] Length = 673 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 176/650 (27%), Positives = 317/650 (48%), Gaps = 60/650 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L E + NQIAAGE++ERP+ +KEL+EN++DA+SS++ I G Q+TDN Sbjct: 14 MTNIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQITVEIEESGLKMIQVTDN 73 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S +T+ + + Sbjct: 74 GEGMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTH 133 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G+ + +G +I ++ ++ GT ++V +LF+ PARL ++KS Q E I DV+ R+++ Sbjct: 134 GSLLIATGGEIETLEAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSL 193 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P+V+FT + ++ S G+ + I+ + G + + ++ + + GY Sbjct: 194 AHPEVAFTLISDGR---QLTQTSGTGDLRQAIAGIYGLNTTKKMLAISNADLDFEVSGYV 250 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P R N N + +NGR +++ + I Y + +GR+P+VV+ ++IDP DV Sbjct: 251 SLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADV 310 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +R + I +I +++ ++ + ++ + S+ H +T LP Sbjct: 311 NVHPTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPL 370 Query: 358 YATSL--TNTQEKLFLQENRLST------------------------------------- 378 + L + F++E+ +S Sbjct: 371 QSRGLYYDPQKNDFFVKESAVSEKIPETDFYFGAVDNSVKVEKAELLPHSEEVIGPSSVK 430 Query: 379 --------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 +L + S+ + +E E + + Q+H Y+ +Q D Sbjct: 431 HASRPQNTFTETDHPNLDLKNRQKLSQMLNRLENEEKSVFPELDYFGQMHGTYLFAQGKD 490 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL I+DQHAA ER+ +E R + Q LL P + + + + E L+ +G Sbjct: 491 GLFIIDQHAAQERVKYEYYRDKIGEVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVG 550 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 I E +G N +RE P + ++ I + ++ D ++ ++ +++ + M+C Sbjct: 551 IFLEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKR 609 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ + LL ++ + N C HGRP I +D+EK+F R Sbjct: 610 SIKANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRR 659 >gi|315612294|ref|ZP_07887208.1| DNA mismatch repair protein HexB [Streptococcus sanguinis ATCC 49296] gi|315315687|gb|EFU63725.1| DNA mismatch repair protein HexB [Streptococcus sanguinis ATCC 49296] Length = 649 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 180/636 (28%), Positives = 309/636 (48%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGQVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEITGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + + ++I ++ ++ + ++ + + ++ +T LP Sbjct: 301 PTKQEVRISKERELMALLSEAISNSLKEQALIPDALENLAKSTVRNRQKVEQTILPLKEN 360 Query: 361 SLTNT---------------------------------------QEKLFLQENRLSTNDL 381 +L KL E + + D Sbjct: 361 TLYYEKTEVTRASQAEVADHQVELTEEGQDLTLFAKETLEQLTKPAKLHFAERKPVSYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASLDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLRERMPLLEEVGVFLAEYGANQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKKV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|83589962|ref|YP_429971.1| DNA mismatch repair protein MutL [Moorella thermoacetica ATCC 39073] gi|83572876|gb|ABC19428.1| DNA mismatch repair protein MutL [Moorella thermoacetica ATCC 39073] Length = 620 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 180/621 (28%), Positives = 293/621 (47%), Gaps = 39/621 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L NQIAAGE++ERP+ +KEL+ENSLDA + + I GGG ++ D+G Sbjct: 8 RITILDAMTANQIAAGEVVERPASVVKELVENSLDAAARHITVEIEGGGLQLIRVRDDGR 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ P+A RH TSKI D + I T GFRGEAL SI AV+ + + +RPP G Sbjct: 68 GIEPEDAPLAFARHATSKIRRAADLARITTLGFRGEALASIAAVARVEMATRPPGRPGGT 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++G K V PGT V V+DLF+ PAR +LK E I + R+A+ + Sbjct: 128 LVRVAGGKPPEVTETGCPPGTSVTVKDLFYNTPARRQYLKKPSTEARAIVATVERLALGH 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F+ S + NG+ ++ + G + + N +L G+T Sbjct: 188 PGVAFSLSLDGR---RSLATPGNGDLQAVLAALYGLEIGRELLPFNGSGAGWSLHGFTSP 244 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N +Q + INGR + ++ + I + Y IP GR+P+ VL L +DP +VDVNV Sbjct: 245 PWLHRSNRDQQVLLINGRYITNRLLTWAIESCYRNVIPAGRHPLFVLHLAVDPGEVDVNV 304 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-------------KMISSFH 346 HPAK +R + + + ++ A+ + +S+ + +F Sbjct: 305 HPAKLEVRLQREQDLARQVTNLVKGALFTPRAVAPATISRSGDRKGAGSAPPVQQGFTFR 364 Query: 347 QDNAPKTHLPKY-------ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV--- 396 + + + +Y EK + T ++ + P + DP+ Sbjct: 365 EPDKQARYWGEYVLRERARENREPEWPEKTGENTGAIKTREVPEGNGPVERDKPDPIGPE 424 Query: 397 ---EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 EE+ A Q+ YI++ DGL I+DQHAAHER +E + ++ Sbjct: 425 TPAEETGKQVLPPLRALGQVFNTYILAGGEDGLYIIDQHAAHERCRYEALVKEGTPGSHP 484 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 +Q L P + L +++ L LG E FG +R +P + ++L Sbjct: 485 AQMLEPPLPLHLAPDMQVKLIDQIITLRELGFIIEEFGTGVFLLRSVPLGIPPGKEREVL 544 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 D + E +T +R +L +AC+G+I++G+ + EM +LL ++ + C Sbjct: 545 EDFLAE-----STLPAPER---LLKLIACHGAIKAGQSLAGAEMQKLLDDLRGVDHPYTC 596 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 HGRP ++L + + + F R Sbjct: 597 PHGRPAVVRLDEAQLARYFHR 617 >gi|266623036|ref|ZP_06115971.1| DNA mismatch repair protein MutL [Clostridium hathewayi DSM 13479] gi|288865200|gb|EFC97498.1| DNA mismatch repair protein MutL [Clostridium hathewayi DSM 13479] Length = 662 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 181/663 (27%), Positives = 292/663 (44%), Gaps = 73/663 (11%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I L + IN+IAAGE+IERP+ +KEL+EN++DA ++ V I GG +F ++TDN Sbjct: 1 MPNITLLDQNTINKIAAGEVIERPASVVKELLENAIDARATAVTVEIKEGGTTFIRVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ EE+P+A RH TSKI +D I + GFRGEAL SI AV + L+++ + T Sbjct: 61 GCGIPREEVPLAFLRHSTSKIKSVEDLFTISSLGFRGEALASIAAVCQVELITKTSEALT 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G++ I G + + GT R+LF+ PAR FLK+ E + + +++ ++A+ Sbjct: 121 GSRYQIEGGMERPLEEIGAPEGTTFIARNLFYNTPARRKFLKTPMTEGSHVAELVEKIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P++S F N+ S N N + I V G + N + + K +I++ G+ Sbjct: 181 SHPEISIRFIQNNQNKLH---TSGNHNLKDIIYTVFGREIAANLLAVEAKKQDISISGFI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P RGN N FINGR ++ I I AY + +YP +L I+P +DV Sbjct: 238 GKPVIARGNRNYENYFINGRYIRSSIISKAIEEAYKPFMMQHKYPFTMLHFTIEPELLDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RFR+ ++ + ++ A+ K + L+K ++ + P+ Sbjct: 298 NVHPTKMELRFRDGEMVYRMVYDAVSGALAHKELIPEVELNKDRTDQEAKEARKREPSPE 357 Query: 358 Y------------------------ATSLTNTQEKLFLQEN-------RLSTNDLLPSDD 386 + ++ FL EN TN L Sbjct: 358 PFELRRLEAMSRQQAACAPGSKRLKPAEPSLMKDPDFLAENWLKKPAAPPETNPLRGPSQ 417 Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH-------------- 432 + G H N + + L + D Sbjct: 418 EPVPSSREEAAAVTKPAAPEGETITPEHDNTAGAGKPEQLDLFDGKLLEPKSRQMHKLIG 477 Query: 433 ----------------AAHERLIFEKMRQDFN-----STKITSQTLLTPEIIDLLEGECA 471 + EK+ + + + +SQ L P I+ L E Sbjct: 478 QVFDTYWLVEFNEQLYIIDQHAAHEKVLYEKTMATLKNREYSSQMLDPPIILTLNMNEEV 537 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 L+ EH + +G + E FG A+R +PA L LL ++ID + D + D Sbjct: 538 LLKEHMKYFSDMGFEIEPFGGREYAVRGVPANLLSIAKKDLLIEMIDGLSD-DVSTHNPD 596 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 I + +ATM+C +++ G ++ + E N L+ ++ N C HGRPT I + ++EK Sbjct: 597 IIYDRVATMSCKAAVKGGNRLSAAEANELIDQLLNLENPYACPHGRPTIISMSKYELEKK 656 Query: 592 FGR 594 F R Sbjct: 657 FKR 659 >gi|19746988|ref|NP_608124.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS8232] gi|25090741|sp|Q8NZ25|MUTL_STRP8 RecName: Full=DNA mismatch repair protein mutL gi|19749243|gb|AAL98623.1| putative DNA mismatch repair protein [Streptococcus pyogenes MGAS8232] Length = 660 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 176/650 (27%), Positives = 316/650 (48%), Gaps = 60/650 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L E + NQIAAGE++ERP+ +KEL+EN++DA+SS++ I G Q+TDN Sbjct: 1 MTNIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQITVEIEESGLKMIQVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S +T+ + + Sbjct: 61 GEGMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTH 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G+ + +G +I ++ ++ GT ++V +LF+ PARL ++KS Q E I DV+ R+++ Sbjct: 121 GSLLIATGGEIETLEAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P+V+FT + ++ S G+ + I+ + G + + ++ + + GY Sbjct: 181 AHPEVAFTLISDGR---QLTQTSGTGDLRQAIAGIYGLNTTKKMLVISNADLDFEVSGYV 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P R N N + +NGR +++ + I Y + +GR+P+VV+ ++IDP DV Sbjct: 238 SLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +R + I +I +++ ++ + ++ + S+ H +T LP Sbjct: 298 NVHPTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPL 357 Query: 358 YATSL--TNTQEKLFLQENRLST------------------------------------- 378 + L + F++E+ +S Sbjct: 358 QSRGLYYDPQKNDFFVKESAVSEKIPETDFYFGAVDNSVKVEKAELLPHSEEVIGPSSVK 417 Query: 379 --------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 +L + S+ +E E + + Q+H Y+ +Q D Sbjct: 418 HASRPQNTFTETDHPNLDLKNRQKLSQMLTRLENEEQSVFPELDYFGQMHGTYLFAQGKD 477 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL I+DQHAA ER+ +E R + Q LL P + + + + E L+ +G Sbjct: 478 GLFIIDQHAAQERVKYEYYRDKIGEVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVG 537 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 I E +G N +RE P + ++ I + ++ D ++ ++ +++ + M+C Sbjct: 538 IFLEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKR 596 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ + LL ++ + N C HGRP I +D+EK+F R Sbjct: 597 SIKANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRR 646 >gi|139474561|ref|YP_001129277.1| DNA mismatch repair protein [Streptococcus pyogenes str. Manfredo] gi|166232111|sp|A2RGV3|MUTL_STRPG RecName: Full=DNA mismatch repair protein mutL gi|134272808|emb|CAM31085.1| DNA mismatch repair protein MutL [Streptococcus pyogenes str. Manfredo] Length = 660 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 176/650 (27%), Positives = 317/650 (48%), Gaps = 60/650 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L E + NQIAAGE++ERP+ +KEL+EN++DA+SS++ I G Q+TDN Sbjct: 1 MTNIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQITVEIEESGLKMIQVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S +T+ + + Sbjct: 61 GEGMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTH 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G+ + +G +I ++ ++ GT ++V +LF+ PARL ++KS Q E I DV+ R+++ Sbjct: 121 GSLLIATGGEIETLEAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P+V+FT + ++ S G+ + I+ + G + + ++ + + GY Sbjct: 181 AHPEVAFTLISDGR---QLTQTSGTGDLRQAIAGIYGLNTTKKMLAISNADLDFEVSGYV 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P R N N + +NGR +++ + I Y + +GR+P+VV+ ++IDP DV Sbjct: 238 SLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +R + I +I +++ ++ + ++ + S+ H +T LP Sbjct: 298 NVHPTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPL 357 Query: 358 YATSL--TNTQEKLFLQENRLST------------------------------------- 378 + L + F++E+ +S Sbjct: 358 QSRGLYYDPQKNDFFVKESAVSEKIPETDFYFGAVDNSVKVEKAELLPHSEEVIGPSSVK 417 Query: 379 --------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 +L + S+ + +E E + + Q+H Y+ +Q D Sbjct: 418 HASRPQNTFTETDHPNLDLKNRQKLSQMLNRLENEEKSVFPELDYFGQMHGTYLFAQGKD 477 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL I+DQHAA ER+ +E R + Q LL P + + + + E L+ +G Sbjct: 478 GLFIIDQHAAQERVKYEYYRDKIGEADSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVG 537 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 I E +G N +RE P + ++ I + ++ D ++ ++ +++ + M+C Sbjct: 538 IFLEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKR 596 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ + LL ++ + N C HGRP I +D+EK+F R Sbjct: 597 SIKANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRR 646 >gi|227524331|ref|ZP_03954380.1| DNA mismatch repair protein [Lactobacillus hilgardii ATCC 8290] gi|227088562|gb|EEI23874.1| DNA mismatch repair protein [Lactobacillus hilgardii ATCC 8290] Length = 651 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 176/640 (27%), Positives = 304/640 (47%), Gaps = 53/640 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L + NQI+AGE++ERP+ +KEL+EN++DA S+ ++ + G ++ D+G Sbjct: 6 RIHELPAILANQISAGEVVERPASVVKELVENAIDAHSTEIDITVEDSGLKVIKVVDDGD 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ S ++ A RH TSKI++ D + T GFRGEALPSI +VS++ L + + G Sbjct: 66 GIDSSQVQTAFLRHATSKITEQRDLFRVRTLGFRGEALPSISSVSNVELKTST--GSVGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G K S + GT V V LF+ PARL +L S E + I+D++ R+A+++ Sbjct: 124 EVVFKGGKFISQQASESRKGTTVIVSSLFYNTPARLKYLSSPNTELSKISDIVNRLALSH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF+F + ++ S G+ + + + G ++ + K+ +I++ GY + Sbjct: 184 PEVSFSFISNGR---ELLRTSGRGDLLQVLGAIYGVKTVSKMQPIKSKTPDISIDGYVSL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR V++ + ++ Y + +GR+P+ V+ + DP +DVNV Sbjct: 241 PELTRSSRNYISLILNGRYVRNFPLTKSVINGYGSKLMIGRFPIAVVNISADPALIDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF-------------- 345 HP K +R I + +I++ + K + + K + Sbjct: 301 HPTKQEVRISEEPKIGGMLSNAIREMLADKQLIPDATRDFKKSFAPSDQSINYSKSVIQS 360 Query: 346 ---HQDNAPKTHLPKYATSLTNT------QEKLFLQENRLSTNDLLPSDDPTYSEDND-- 394 Q P +T N + + LQ R++ D L S + + D Sbjct: 361 IPEEQPLFAVNSKPVVSTKQQNEVDPIVIKNRDDLQSPRVAKLDSLLSSEASSVPVFDES 420 Query: 395 -----------------PVEESE---ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAA 434 E+ E T + QIH Y++++T + + ++DQHAA Sbjct: 421 GFGVTAKVQPKNPVQVTKPEQEELVVETGFPDLQYIGQIHGTYLVAETPNNMYLIDQHAA 480 Query: 435 HERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA 494 ER+ +E RQ Q LL P ++D + L+ E L+ LGI E+FG N+ Sbjct: 481 QERINYEYYRQAIGEVGRAQQKLLVPIVLDYSTSDFLLVNEKIPLLNELGIHLEQFGQNS 540 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQS 554 IRE P +++++D I+ S ++ E M+C +I++ + Sbjct: 541 FIIREHPMWFKAGQEESTIKEMVDWIL-SDHRLSVAAFREKTAIMMSCKRAIKANHHLDE 599 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL ++ + N C HGRPT +K DIEK+F R Sbjct: 600 RQAKALLAKLPECENPYNCPHGRPTLVKFTNEDIEKMFKR 639 >gi|306826472|ref|ZP_07459783.1| DNA mismatch repair protein MutL [Streptococcus pyogenes ATCC 10782] gi|304431331|gb|EFM34329.1| DNA mismatch repair protein MutL [Streptococcus pyogenes ATCC 10782] Length = 660 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 176/650 (27%), Positives = 315/650 (48%), Gaps = 60/650 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L E + NQIAAGE++ERP+ +KEL+EN++DA+SS++ I G Q+TDN Sbjct: 1 MTNIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQITVEIEESGLKMIQVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S +T+ + + Sbjct: 61 GEGMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTH 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G+ + +G +I ++ ++ GT ++V +LF+ PARL ++KS Q E I DV+ R+++ Sbjct: 121 GSLLIATGGEIETLEAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P+V+FT + ++ S G+ + I+ + G + + ++ + + GY Sbjct: 181 AHPEVAFTLISDGR---QLTQTSGTGDLRQAIAGIYGLNTTKKMLVISNADLDFEVSGYV 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P R N N + +NGR +++ + I Y + +GR+P+VV+ ++IDP DV Sbjct: 238 SLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +R + I +I +++ ++ + ++ + S+ H +T LP Sbjct: 298 NVHPTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPL 357 Query: 358 YATSL--TNTQEKLFLQENRLST------------------------------------- 378 + L + F++E+ +S Sbjct: 358 QSRGLYYDPQKNDFFVKESAVSEKIPETDFYFGAVDNSVKVEKAELLPHSEEVIGPSSVK 417 Query: 379 --------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 +L + S+ +E E + + Q+H Y+ +Q D Sbjct: 418 HASRPQNTFTETDHPNLDLKNRQKLSQMLTRLENEEQSVFPELDYFGQMHGTYLFAQGKD 477 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL I+DQHAA ER+ +E R Q LL P + + + + E L+ +G Sbjct: 478 GLFIIDQHAAQERVKYEYYRDKIGEVDSRLQQLLVPYLFEFSGSDFINLQEKMALLNEVG 537 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 I E +G N +RE P + ++ I + ++ D ++ ++ +++ + M+C Sbjct: 538 IFLEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKR 596 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ + LL ++ + N C HGRP I +D+EK+F R Sbjct: 597 SIKANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRR 646 >gi|307708033|ref|ZP_07644502.1| DNA mismatch repair protein MutL [Streptococcus mitis NCTC 12261] gi|307615923|gb|EFN95127.1| DNA mismatch repair protein MutL [Streptococcus mitis NCTC 12261] Length = 649 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 180/636 (28%), Positives = 313/636 (49%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + ++ +T LP Sbjct: 301 PTKQEVRISKEKELMALVSEAIANSLKEQTLIPDALENLAKSTVRNRQKVEQTILPLKEN 360 Query: 357 ----KYATSLTNTQ-------------------------------EKLFLQENRLSTNDL 381 + S+ ++Q KL E + + D Sbjct: 361 TLYYEKTESIRSSQAEVADYQVELTEEGQDLTLFAKETLDQLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E E++ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASLDKAYDKLEREESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMTHLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|306826020|ref|ZP_07459356.1| DNA mismatch repair protein HexB [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431736|gb|EFM34716.1| DNA mismatch repair protein HexB [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 649 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 180/636 (28%), Positives = 309/636 (48%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAMDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ + P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFEITGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + + ++I K++ ++ + ++ + + + + +T LP Sbjct: 301 PTKQEVRISKERELMKLVSEAIAKSLKEQTLIPDALENLAKSTLRNCEKVEQTTLPLKEN 360 Query: 361 SLTNTQE---------------------------------------KLFLQENRLSTNDL 381 L Q KL E + + D Sbjct: 361 MLYYEQPAITSPTQAEVADHQVELTEEGQDLTLFAKETLEQLTKPAKLHFAERKPVSYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E E++ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASLDKAYDKLEREESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLRERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P + ++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMVEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|261419512|ref|YP_003253194.1| DNA mismatch repair protein [Geobacillus sp. Y412MC61] gi|319766327|ref|YP_004131828.1| DNA mismatch repair protein MutL [Geobacillus sp. Y412MC52] gi|261375969|gb|ACX78712.1| DNA mismatch repair protein MutL [Geobacillus sp. Y412MC61] gi|317111193|gb|ADU93685.1| DNA mismatch repair protein MutL [Geobacillus sp. Y412MC52] Length = 630 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 177/631 (28%), Positives = 296/631 (46%), Gaps = 43/631 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IRKL + + N+IAAGE++ERP+ +KEL+EN++DA S+ + + G + ++ DNG Sbjct: 3 RIRKLDDLLANKIAAGEVVERPASVVKELVENAIDAHSTVINIELEEAGMAKIRVIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A +RH TSKI + D I T GFRGEALPSI +VS + L + G Sbjct: 63 GMEEDDCLLAFERHATSKIHNEHDLFRIRTLGFRGEALPSIASVSEVELT-TGTGSGPGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G + S A GT + V +LFF PARL ++K+ E DV+ R+A+A+ Sbjct: 122 KLVLQGGALVSRERAAGRKGTDITVSNLFFNTPARLKYMKTIHTELGHAADVVNRLALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF + + +G+ ++ + G + + + +S + T++GY Sbjct: 182 PDVSFRLRHQGK---TLLATNGSGDVRHVLAAIYGAETARQMIPIEAESLDFTVRGYISP 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR V+ ++ I Y +P+GRYP+V L +E+DP VDVNV Sbjct: 239 PDVTRASRNYISLVVNGRYVRSVPLMKAIEAGYHTLLPIGRYPIVFLSIEMDPVLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI-SSFHQDNAPKTHLPKY 358 HPAK +RF + + +I++A ++ + S KM Q TH + Sbjct: 299 HPAKLEVRFSKEAELNELVTDAIRQAFRERTLIPSVSADSKMAKPKAEQAAWTFTHRVRE 358 Query: 359 ATSLTN---------------TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 + L++ T + + + D D EE Sbjct: 359 PSVLSSDIGGGEDATAPFALLTGDAPAERPSAAVQTDEWGIPDEHGPAFERKQEEEVGEE 418 Query: 404 Y--------------------QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 Q+H YI+++ GL ++DQHAA ER+ +E Sbjct: 419 RRALRLPTDGQAEDKAAADRLPPLYPIGQLHGTYILAENEHGLYMIDQHAAQERINYEYF 478 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 R+ Q LL P + + E I ++L R G+ E FGP A +R P Sbjct: 479 REKLGEATKEVQELLIPLMFEYPADEYERIAACRDELARCGVFLEPFGPRAFLVRSHPTW 538 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 K +++ ++I++++ + T ++ E M+C +I++ + ++ E+ LL Sbjct: 539 FPKGREKEIIEEMIEQVLAAKTVD-IKQLREQAAILMSCKRAIKANQHLRQDELFALLEA 597 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + + C HGRP + +IEKLF R Sbjct: 598 LRQTTDPFTCPHGRPIIVHFSTYEIEKLFKR 628 >gi|94995292|ref|YP_603390.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS10750] gi|94548800|gb|ABF38846.1| DNA mismatch repair protein mutL [Streptococcus pyogenes MGAS10750] Length = 673 Score = 493 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 176/650 (27%), Positives = 316/650 (48%), Gaps = 60/650 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L E + NQIAAGE++ERP+ +KEL+EN++DA+SS++ I G Q+TDN Sbjct: 14 MTNIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQITVEIEESGLKMIQVTDN 73 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S +T+ + + Sbjct: 74 GEGMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTH 133 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G+ + +G +I ++ ++ GT ++V +LF+ PARL ++KS Q E I DV+ R+++ Sbjct: 134 GSLLIATGGEIETLEAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSL 193 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P+V+FT + ++ S G+ + I+ + G + + ++ + + GY Sbjct: 194 AHPEVAFTLISDGR---QLTQTSGTGDLRQAIAGIYGLNTTKKMLAISNADLDFEVSGYV 250 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P R N N + +NGR +++ + I Y + +GR+P+VV+ ++IDP DV Sbjct: 251 SLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADV 310 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +R + I +I +++ ++ + ++ + S+ H +T LP Sbjct: 311 NVHPTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPL 370 Query: 358 YATSL--TNTQEKLFLQENRLST------------------------------------- 378 + L + F++E+ +S Sbjct: 371 QSRGLYYDPQKNDFFVKESAVSEKIPETDFYSGAVDNSVKVEKAELLPHSEEVIGPSSVK 430 Query: 379 --------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 +L + S+ +E E + + Q+H Y+ +Q D Sbjct: 431 HASRPQNIFTETDHPNLDLKNRQKLSQMLTRLENEEKSVFPELDYFGQMHGTYLFAQGKD 490 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL I+DQHAA ER+ +E R + Q LL P + + + + E L+ +G Sbjct: 491 GLFIIDQHAAQERVKYEYYRDKIGEVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVG 550 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 I E +G N +RE P + ++ I + ++ D ++ ++ +++ + M+C Sbjct: 551 IFLEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKR 609 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ + LL ++ + N C HGRP I +D+EK+F R Sbjct: 610 SIKANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRR 659 >gi|94991382|ref|YP_599482.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS10270] gi|94544890|gb|ABF34938.1| DNA mismatch repair protein mutL [Streptococcus pyogenes MGAS10270] Length = 673 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 175/650 (26%), Positives = 316/650 (48%), Gaps = 60/650 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L E + NQIAAGE++ERP+ +KEL+EN++DA+SS++ I G Q+TDN Sbjct: 14 MTNIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQITVEIEESGLKMIQVTDN 73 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S +T+ + + Sbjct: 74 GEGMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTH 133 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G+ + +G +I ++ ++ GT ++V +LF+ PARL ++KS Q E I DV+ R+++ Sbjct: 134 GSLLIATGGEIETLEAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSL 193 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P+V+FT + ++ S G+ + I+ + G + + ++ + + GY Sbjct: 194 AHPEVAFTLISDGR---QLTQTSGTGDLRQAIAGIYGLNTTKKMLAISNADLDFEVSGYV 250 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P R N N + +NGR +++ + I Y + +GR+P+VV+ ++IDP DV Sbjct: 251 SLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADV 310 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +R + I +I +++ ++ + ++ + S+ H +T LP Sbjct: 311 NVHPTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPL 370 Query: 358 YATSL--TNTQEKLFLQENRLST------------------------------------- 378 + L + F++E+ +S Sbjct: 371 QSRGLYYDPQKNDFFVKESAVSEKIPETDFYSGAVDNSVKVEKAELLPHSEEVIGPSSVK 430 Query: 379 --------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 +L + S+ +E E + + Q+H Y+ +Q D Sbjct: 431 HASRPQNTFTETDHPNLDLKNRQKLSQMLTRLENEEQSVFPELDYFGQMHGTYLFAQGKD 490 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL I+DQHAA ER+ +E R + Q LL P + + + + E L+ +G Sbjct: 491 GLFIIDQHAAQERVKYEYYRDKIGEVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVG 550 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 + E +G N +RE P + ++ I + ++ D ++ ++ +++ + M+C Sbjct: 551 VFLEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKR 609 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ + LL ++ + N C HGRP I +D+EK+F R Sbjct: 610 SIKANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRR 659 >gi|227513116|ref|ZP_03943165.1| DNA mismatch repair protein [Lactobacillus buchneri ATCC 11577] gi|227083691|gb|EEI19003.1| DNA mismatch repair protein [Lactobacillus buchneri ATCC 11577] Length = 651 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 179/640 (27%), Positives = 306/640 (47%), Gaps = 53/640 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L + NQI+AGE++ERP+ +KEL+EN++DA S+ ++ + G ++ D+G Sbjct: 6 QIHELPAILANQISAGEVVERPASVVKELVENAIDAHSTEIDITVEDSGLKLIKVVDDGD 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ S ++ A RH TSKI++ D + T GFRGEALPSI +VS++ L + + G Sbjct: 66 GIDSSQVQTAFLRHATSKITEQRDLFRVRTLGFRGEALPSISSVSNIELKTST--GSVGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G K S + GT V V LF+ PARL +L S E + I+D++ R+A+++ Sbjct: 124 EVVFKGGKFISQQASESRKGTTVIVSSLFYNTPARLKYLSSPNTELSKISDIVNRLALSH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF+F + ++ S G+ + + + G ++ + K+ +I++ GY + Sbjct: 184 PEVSFSFISNGR---ELLRTSGRGDLLQVLGAIYGVKTVSKMQPIKSKTPDISIDGYVSL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR V++ + ++ Y + +GR+P+ V+ + DP +DVNV Sbjct: 241 PELTRSSRNYISLILNGRYVRNFPLTKSVINGYGSKLMIGRFPIAVVNISADPALIDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV---------------LSKKMISS 344 HP K +R I + +I++ + K + + SK +I S Sbjct: 301 HPTKQEVRISEEPKIGGMLSNAIREMLADKQLIPDATRDFKKSFAPSDQSINYSKSVIQS 360 Query: 345 FHQDNAPKTHLPKYATSLTNTQE--------KLFLQENRLSTNDLLPSDDPTYSEDND-- 394 ++ K S E + LQ R++ D L S + + D Sbjct: 361 IPEEQPLFAVNSKPVVSTKQQNEVDPIVIKNRDDLQSPRVAKLDSLLSSEASSVPVFDES 420 Query: 395 -----------------PVEESE---ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAA 434 E+ E T + QIH Y++++T + + ++DQHAA Sbjct: 421 GFGVTAKVQPKNPVQVTKPEQEELVVETGFPDLQYIGQIHGTYLVAETPNNMYLIDQHAA 480 Query: 435 HERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA 494 ER+ +E RQ Q LL P ++D + L+ E L+ LGI E+FG N+ Sbjct: 481 QERINYEYYRQAIGEVGRAQQKLLVPIVLDYSTSDFLLVNEKIPLLNELGIHLEQFGQNS 540 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQS 554 IRE P ++++ID I+ S ++ E M+C +I++ + Sbjct: 541 FIIREHPMWFKAGQEESTIKEMIDWIL-SDHRLSVAAFREKTAIMMSCKRAIKANHHLDE 599 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL ++ + N C HGRPT +K DIEK+F R Sbjct: 600 RQAKALLAKLPECENPYNCPHGRPTLVKFTNEDIEKMFKR 639 >gi|116493021|ref|YP_804756.1| DNA mismatch repair protein [Pediococcus pentosaceus ATCC 25745] gi|122265515|sp|Q03EQ8|MUTL_PEDPA RecName: Full=DNA mismatch repair protein mutL gi|116103171|gb|ABJ68314.1| DNA mismatch repair protein MutL [Pediococcus pentosaceus ATCC 25745] Length = 645 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 179/633 (28%), Positives = 301/633 (47%), Gaps = 46/633 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +LSE + +QIAAGE++ERP+ +KEL+EN++DA SSR++ ++ G +I DNG G Sbjct: 4 IHELSEILADQIAAGEVVERPASVVKELVENAIDAGSSRIDILLEESGLKMIRIIDNGSG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + + ++ +A +RH TSKIS D + T GFRGEALPSI +++ + +++ G + Sbjct: 64 IDANQVEIAFKRHATSKISSRSDLFKVGTLGFRGEALPSIASIADVEMLTATTDGP-GKK 122 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G K+ GT + V+DLFF PARL +LKS Q E + ITD++ R+A++YP Sbjct: 123 IHYRGGKLEDSGDAQSRQGTDITVQDLFFNTPARLKYLKSLQTELSKITDIVNRIALSYP 182 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+ + + ++ S NGN + ++ + G V + E++ + T+ GY +P Sbjct: 183 EVAISLQNNER---ELMRTSGNGNIQQVLANIYGAKNAQKMVHVKEQNIDFTIDGYISLP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F R N + V +NGR +++ I I Y + +GRYPV VL ++ DP VDVNVH Sbjct: 240 EFTRANRSYITVLVNGRYIKNFQISKAIIDGYGSKLMVGRYPVAVLNIKTDPILVDVNVH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV------------------LSKKMI 342 P K +R + + I +++ + K + +V + Sbjct: 300 PTKQEVRISEEQTLLDLISKAVFNELADKNLIPDAVDNLKKSRVKVSSSEQLDLARMAIS 359 Query: 343 SSFHQDNAPKT---------------------HLPKYATSLTNTQEKLFLQENRLSTNDL 381 SF + T P S + + + ND Sbjct: 360 GSFEMEQDHVTIPDTDNDEVEKEVNISDRYVEPEPIVINSRQDLKSDTIAEFKTKYANDA 419 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 + ++ + + E+ + Q+H Y+ ++ DGL I+DQHAA ER+ +E Sbjct: 420 VVNNTVEDGDQPELKEKDAVQRFPTLTYIGQMHGTYLFAEAEDGLYIIDQHAAQERINYE 479 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 R Q LL P +D + I E L G+ E FG N +R P Sbjct: 480 YYRVQIGEVSDDQQDLLVPIYLDYSTTDAIRIKEKQTVLESCGLFLEEFGKNTFIVRHHP 539 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 K +++++D +++ ++ T+ E M+C +I++ + + +LL Sbjct: 540 TWFKKGQEEDTVKEMVDYVLN-DSSMTVAKFREATAIMMSCKRAIKANHHLDEPQAKQLL 598 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ K N C HGRP + +D+EK+F R Sbjct: 599 KDIAKAENPFNCPHGRPVLVHFSTTDMEKMFKR 631 >gi|56808551|ref|ZP_00366285.1| COG0323: DNA mismatch repair enzyme (predicted ATPase) [Streptococcus pyogenes M49 591] gi|209560231|ref|YP_002286703.1| DNA mismatch repair protein [Streptococcus pyogenes NZ131] gi|238058937|sp|B5XJ09|MUTL_STRPZ RecName: Full=DNA mismatch repair protein mutL gi|209541432|gb|ACI62008.1| DNA mismatch repair protein MutL [Streptococcus pyogenes NZ131] Length = 660 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 176/650 (27%), Positives = 316/650 (48%), Gaps = 60/650 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L E + NQIAAGE++ERP+ +KEL+EN++DA+SS++ I G Q+TDN Sbjct: 1 MTNIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQITVEIEESGLKMIQVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S +T+ + + Sbjct: 61 GEGMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTH 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G+ + +G +I ++ ++ GT ++V +LF+ PARL ++KS Q E I DV+ R+++ Sbjct: 121 GSLLIATGGEIETLEAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P+V+FT + ++ S G+ + I+ + G + + ++ + + GY Sbjct: 181 AHPEVAFTLISDGR---QLTQTSGTGDLRQAIAGIYGLNTTKKMLAISNADLDFEVSGYV 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P R N N + +NGR +++ + I Y + +GR+P+VV+ ++IDP DV Sbjct: 238 SLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +R + I +I +++ ++ + ++ + S+ H +T LP Sbjct: 298 NVHPTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPL 357 Query: 358 YATSL--TNTQEKLFLQENRLST------------------------------------- 378 + L + F++E+ +S Sbjct: 358 QSRGLYYDPQKNDFFVKESAVSEKIPETDFYSGAVDNSIKVEKAELLPHSEEVIGPSSVK 417 Query: 379 --------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 +L + S+ +E E + + Q+H Y+ +Q D Sbjct: 418 HASRPQNIFTETDHPNLDLKNRQKLSQMLTRLENEEKSVFPELDYFGQMHGTYLFAQGKD 477 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL I+DQHAA ER+ +E R + Q LL P + + + + E L+ +G Sbjct: 478 GLFIIDQHAAQERVKYEYYRDKIGEVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVG 537 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 I E +G N +RE P + ++ I + ++ D ++ ++ +++ + M+C Sbjct: 538 IFLEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKR 596 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ + LL ++ + N C HGRP I +D+EK+F R Sbjct: 597 SIKANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRR 646 >gi|304438412|ref|ZP_07398352.1| DNA mismatch repair protein MutL [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368495|gb|EFM22180.1| DNA mismatch repair protein MutL [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 622 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 190/621 (30%), Positives = 298/621 (47%), Gaps = 34/621 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + IN+IAAGE++ERP+ +KEL+EN++DA ++ VE I GGG SF ++TDNG Sbjct: 3 RIHVLDDATINKIAAGEVVERPASVVKELVENAMDAGATAVEVEIMGGGTSFIRVTDNGR 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ A+ RH TSKI + D I T GFRGEALP+I +VSH +L++R ++ G Sbjct: 63 GMTGEDARAAILRHATSKIAAASDLETIATLGFRGEALPTIASVSHFSLLTRQAADDLGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ISG + GT V V DLFF PAR FLK+ E I+D + R+A++ Sbjct: 123 RVDISGGGTPMIEDAGCAVGTSVRVEDLFFNTPARKKFLKTNATEAGKISDYVIRLALSR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN--EITLQGYT 237 P ++F F + +G+ I + G D + + L+ + +I + GY Sbjct: 183 PDIAFRFINNNRMTIM---TAGDGDLARTIGSIYGGDAASALIPLDFYDDAADIRITGYI 239 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P+ R + +NGRT+Q++ I I Y +P +P+ V+++ + R +DV Sbjct: 240 SKPSLIRSSRAWQTYIVNGRTIQNRAIAKAIDNVYRSLVPKMGFPLAVIVITVPQRTIDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP---KTH 354 NVHP K+ ++F + I + +++ AI T+ + + FH + P T Sbjct: 300 NVHPQKTEMKFEDEGRIFKAVYKAVLDAIRGAAGETTGIAAAVEKPRFHYEAVPLDVSTP 359 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY---------- 404 ++ + D V+E+ A Sbjct: 360 SASPVSAPARGYAAPTPHPQTVHEAVQWAGARVDLRTAQDAVQEARAQERAAFSDVPSAP 419 Query: 405 -----------QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 + + Q+ YII+Q+T L I+DQHAAHER++F++ + I Sbjct: 420 RAAQGDDISMEERMLPIGQVDLTYIIAQSTATLYIIDQHAAHERILFDRF--SAQTDGIP 477 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 SQ +L I+ E I E+ E RLG E G + E PA + K ++ Sbjct: 478 SQQMLVHAILSFDAHEAQYIEENAELFDRLGFHLEAAGERTYRLTETPADVPTKEAEGII 537 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 R+I+ + D T E +ATMAC +I++G ++ +M LL E+ P C Sbjct: 538 REILASLGDLHTATPAN-LREAGIATMACRAAIKAGEELSIRQMEILLEELRATPFPFTC 596 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 HGRPT +K D+ K+F R Sbjct: 597 PHGRPTILKFGTHDLAKMFKR 617 >gi|290968594|ref|ZP_06560132.1| DNA mismatch repair protein, C-terminal domain protein [Megasphaera genomosp. type_1 str. 28L] gi|290781247|gb|EFD93837.1| DNA mismatch repair protein, C-terminal domain protein [Megasphaera genomosp. type_1 str. 28L] Length = 632 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 179/633 (28%), Positives = 302/633 (47%), Gaps = 47/633 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L E N+IAAGE++ERP+ IKEL+ENS+DA ++ +E IA GG+S+ ++TD+G G Sbjct: 5 IAVLDEATRNKIAAGEVVERPASCIKELVENSIDAGATMIEVEIADGGQSYMRVTDDGCG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M E+ + + RH TSKI +D +I + GFRGEA+PSI AVSH + +R ++ + Sbjct: 65 MGPEDARICIVRHATSKIRTVEDIFSITSLGFRGEAVPSIAAVSHFQITTRRKEDEFASH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + +I + V GT +EV DLFF PAR FLKS + ET I++++ ++++A+P Sbjct: 125 LVLQAGEIITQEQVGAPAGTTMEVSDLFFNTPARRKFLKSTRTETAKISEMLTKLSLAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE-LNEKSNEITLQGYTGI 239 + FTF + +G+ E ++ + G + ++ EI + G+ G Sbjct: 185 AIGFTFINNGRTTLQ---TGGSGSLQETVADIYGAEVAKEVFPLGASETEEIGVSGFVGR 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ + + +N R V + + I AY +P YP +L +++DP +DVNV Sbjct: 242 PSILKSSRMWQTCVVNHRIVYNPMLFKAIDNAYHAMLPKAGYPFALLHIQLDPAALDVNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN-------------------KKGISTSSVLSKK 340 HPAK+ I+F + + + +I A+ + ++ + Sbjct: 302 HPAKTEIKFADEKAVYRAVYHAIVGALVAQEEPERIARPIAADSRQLQHREEAAADFVRT 361 Query: 341 ------------MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + ++ + ++L + ++E R + P + Sbjct: 362 QEPERVWEPTALTLPEIPEERRSAGYAAHRGSALQASAPVASVRERRENPYTAAPGTERD 421 Query: 389 YSEDNDPVEESEATHYQLGI-------ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 +S E + Q+ + YII++ L I+DQHAAHER+ ++ Sbjct: 422 FSVALHAGEATTRPDAQIHFEEETDFVPLGAVADCYIIAKKGRDLYIIDQHAAHERVRYD 481 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 + + SQ LLTPE ++ E + L+ E E +LG GP I I E+P Sbjct: 482 RF--CRQMENVPSQQLLTPEFVEADETDMVLLTEQRELFRKLGYTYSEAGPTTIRIEEVP 539 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 A L I + L+ I + ++ + LA MAC G+I++G K+ EM +LL Sbjct: 540 ADLPGGEIKESLQTICRGLRENKH-WDKATIRHRALAYMACRGAIKAGDKITIREMQKLL 598 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + C HGRP I+ +++ KLF R Sbjct: 599 EDLFRTEKPFVCPHGRPVIIRFTAAELAKLFKR 631 >gi|15675871|ref|NP_270045.1| DNA mismatch repair protein [Streptococcus pyogenes M1 GAS] gi|71911617|ref|YP_283167.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS5005] gi|20455130|sp|Q99XN7|MUTL_STRP1 RecName: Full=DNA mismatch repair protein mutL gi|13623105|gb|AAK34766.1| putative DNA mismatch repair protein [Streptococcus pyogenes M1 GAS] gi|71854399|gb|AAZ52422.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS5005] Length = 660 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 175/650 (26%), Positives = 315/650 (48%), Gaps = 60/650 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L E + NQIAAGE++ERP+ +KEL+EN++DA+SS++ I G Q+TDN Sbjct: 1 MTNIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQITVEIEESGLKMIQVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S +T+ + + Sbjct: 61 GEGMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTH 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G+ + +G +I ++ ++ GT ++V +LF+ PARL ++KS Q E I DV+ R+++ Sbjct: 121 GSLLIATGGEIETLEAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P+V+FT + ++ S G+ + I+ + G + + ++ + + GY Sbjct: 181 AHPEVAFTLISDGR---QLTQTSGTGDLRQAIAGIYGLNTTKKMLAISNADLDFEVSGYV 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P R N N + +NGR +++ + I Y + +GR+P+VV+ ++IDP DV Sbjct: 238 SLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +R + I +I +++ ++ + ++ + S+ H +T LP Sbjct: 298 NVHPTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPL 357 Query: 358 YATSL--TNTQEKLFLQENRLST------------------------------------- 378 + L + F++E+ +S Sbjct: 358 QSRGLYYDPQKNDFFVKESAVSEKIPETDFYSGAVDNSVKVEKVELLPHSEEVIGPSSVK 417 Query: 379 --------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 +L + S+ +E + + Q+H Y+ +Q D Sbjct: 418 HASRPQNTFTETDHPNLDLKNRQKLSQMLTRLENEGQSVFPELDYFGQMHGTYLFAQGKD 477 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL I+DQHAA ER+ +E R + Q LL P + + + + E L+ +G Sbjct: 478 GLFIIDQHAAQERVKYEYYRDKIGEVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVG 537 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 I E +G N +RE P + ++ I + ++ D ++ ++ +++ + M+C Sbjct: 538 IFLEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKR 596 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ + LL ++ + N C HGRP I +D+EK+F R Sbjct: 597 SIKANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRR 646 >gi|293376441|ref|ZP_06622673.1| DNA mismatch repair protein, C-terminal domain protein [Turicibacter sanguinis PC909] gi|325845058|ref|ZP_08168374.1| DNA mismatch repair protein MutL [Turicibacter sp. HGF1] gi|292644950|gb|EFF63028.1| DNA mismatch repair protein, C-terminal domain protein [Turicibacter sanguinis PC909] gi|325488934|gb|EGC91327.1| DNA mismatch repair protein MutL [Turicibacter sp. HGF1] Length = 609 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 180/610 (29%), Positives = 301/610 (49%), Gaps = 22/610 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR++SE++ N IAAGE+IERP+ +KEL+EN++DA S+ +E + G ++ DNG Sbjct: 3 KIRRMSEQLANMIAAGEVIERPASVVKELLENAIDANSTSIEIQLQDSGVRQIRVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ + +A +RH TSK+ D I T GFRGEALPSI +VS + + + ++G Sbjct: 63 GMSESDALLAFERHATSKVKTQYDIFRIQTLGFRGEALPSIASVSDVHVKT-SDGASSGV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I ++ P M GT +EV LFF PARL +KS E + ITD + ++A+++ Sbjct: 122 HLNIKAGEVLVNEPGVMRKGTEMEVNHLFFNTPARLKHIKSLNTELSHITDYLNKIALSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++F + ++ N N I+ V G D + + K+++ + G+ Sbjct: 182 PEIAFKLLNNQRLLFQTN---GQNNLQSVIASVYGFDVAKKMIPFSAKNDDFEISGFLSD 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P NR + N + +NGR +++ ++ +I AY +P +YP+VVL L++DP VDVNV Sbjct: 239 PIINRASRNYVTIIVNGRAIRNYNLMRSIIEAYHTLLPKDKYPIVVLNLKLDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS------VLSKKMISSFHQDNAPKT 353 HPAK +RF ++ FI ++ + + + V+ K I T Sbjct: 299 HPAKLEVRFSQEESLKTFIYHELRNVLKQVEYIPETQIEEPKVVMPKPIQQTLSLTKEAT 358 Query: 354 HLPKYATSLTNTQEKLFLQEN---------RLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 P A + + +E+ + + S + + V +A Sbjct: 359 FKPTIAVQMVDENPIELKKESVDVKKESVHVEEVAEPMVSLEQPAQDFKVVVPTRQAIPQ 418 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 Q+H Y+++Q +GL IVDQHAA ER+ +EK K L+ P ++ Sbjct: 419 LELHYIGQLHGTYLLAQNEEGLFIVDQHAAMERIQYEKNYALLKDVKGDCIELIIPMVLK 478 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 E L+ E L + G + E FG ++ +R IP + + ++ I+ +II Sbjct: 479 YSANELLLLKESLPSLMKFGFEIEEFGGQSLVVRTIPVWVQNLDAKLIVETILQQII-YD 537 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 + E++ M+C GSI++ + + E+ ++L ++ C HGRP +KL Sbjct: 538 NKVDIGKLRESVAIMMSCKGSIKANQYINEHEIKQMLVDLCLCDQPYTCPHGRPIIVKLT 597 Query: 585 LSDIEKLFGR 594 +IEKLF R Sbjct: 598 KYEIEKLFKR 607 >gi|227510188|ref|ZP_03940237.1| DNA mismatch repair protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190393|gb|EEI70460.1| DNA mismatch repair protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 651 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 176/640 (27%), Positives = 303/640 (47%), Gaps = 53/640 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L + NQI+AGE++ERP+ +KEL+EN++DA S+ ++ + G ++ D+G Sbjct: 6 QIHELPAILANQISAGEVVERPASVVKELVENAIDAHSTEIDITVEDSGLKVIKVVDDGD 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ S ++ A RH TSKI++ D + T GFRGEALPSI +VS++ L + + G Sbjct: 66 GIDSSQVQTAFLRHATSKITEQRDLFRVRTLGFRGEALPSISSVSNVELKTST--GSVGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G K S + GT V V LF+ PARL +L S E + I+D++ R+A+++ Sbjct: 124 EVVFKGGKFISQQASESRKGTTVIVSSLFYNTPARLKYLSSPNTELSKISDIVNRLALSH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF+F + ++ S G+ + + + G ++ + K+ +I++ GY + Sbjct: 184 PEVSFSFISNGR---ELLRTSGRGDLLQVLGAIYGVKTVSKMQPIKSKTPDISIDGYVSL 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR V++ + ++ Y + +GR+P+ V+ + DP +DVNV Sbjct: 241 PELTRSSRNYISLILNGRYVRNFPLTKSVINGYGSKLMIGRFPIAVVNISADPALIDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF-------------- 345 HP K +R I + +I++ + K + + K + Sbjct: 301 HPTKQEVRISEEPKIGGMLSNAIREMLADKQLIPDATRDFKKSFAPSDQSINYSKSVIQS 360 Query: 346 ---HQDNAPKTHLPKYATSLTNT------QEKLFLQENRLSTNDLLPSDDPTYSEDND-- 394 Q P +T N + + LQ R++ D L S + + D Sbjct: 361 IPEEQPLFAVNSKPVVSTKQQNEVDPIVIKNRDDLQSPRVAKLDSLLSSEASSVPVFDES 420 Query: 395 -----------------PVEESE---ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAA 434 E+ E T + QIH Y++++T + ++DQHAA Sbjct: 421 GFGVTAKVQPKNPVQVTKPEQEELVVETGFPDLQYIGQIHGTYLVAETPSNMYLIDQHAA 480 Query: 435 HERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA 494 ER+ +E R+ Q LL P ++D + L+ E L+ LGI E+FG N+ Sbjct: 481 QERINYEYYRKAIGEVGRAQQKLLVPIVLDYSTSDFLLVNEKIPLLNELGIHLEQFGQNS 540 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQS 554 IRE P ++++ID I+ S ++ E M+C +I++ + Sbjct: 541 FIIREHPMWFKAGQEESTIKEMIDWIL-SDHRLSVAAFREKTAIMMSCKRAIKANHHLDE 599 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL ++ + N C HGRPT +K DIEK+F R Sbjct: 600 RQAKALLAKLPECENPYNCPHGRPTLVKFTNEDIEKMFKR 639 >gi|238927478|ref|ZP_04659238.1| DNA mismatch repair protein MutL [Selenomonas flueggei ATCC 43531] gi|238884760|gb|EEQ48398.1| DNA mismatch repair protein MutL [Selenomonas flueggei ATCC 43531] Length = 622 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 189/621 (30%), Positives = 306/621 (49%), Gaps = 34/621 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + IN+IAAGE++ERP+ +KEL+EN++DA ++ VE I GGG SF ++TDNG Sbjct: 3 RIHVLDDATINKIAAGEVVERPASVVKELVENAMDAGATAVEVEIMGGGTSFIRVTDNGR 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ A+ RH TSKI + D I T GFRGEALP+I +VSH +L++R ++ G Sbjct: 63 GMTGEDARAAILRHATSKIAAASDLETIATLGFRGEALPTIASVSHFSLLTRQAADDLGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ISG + GT V V DLFF PAR FLK+ E I+D + R+A++ Sbjct: 123 RVDISGGGTPMIEDAGCAVGTSVRVEDLFFNTPARKKFLKTNATEAGKISDYVIRLALSR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN--EITLQGYT 237 P ++F F + +G+ I + G D + + L+ + +I + GY Sbjct: 183 PDIAFRFINNNRMTIM---TAGDGDLARTIGSIYGGDAASALIPLDFYDDAADIRITGYI 239 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P+ R + +NGRT+Q++ I I Y +P +P+ V+++ + R +DV Sbjct: 240 SKPSLIRSSRAWQTYIVNGRTIQNRAIAKAIDNVYRSLVPKMGFPLAVIVITVPQRTIDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP------ 351 NVHP K+ ++F + I + +++ AI T+ + + FH + P Sbjct: 300 NVHPQKTEMKFEDEGRIFKAVYKAVLDAIRGAAGETTGIAAAVEKPKFHYEAVPLDVSTL 359 Query: 352 -----KTHLPKYATSLTNTQ----------EKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 YA + Q ++ L+ + + ++ + +S+ Sbjct: 360 SASPVSAPARGYAAPPPHPQTVHEAVQWAGARVDLRTAQDAVQEVRAQERAAFSDVPSAP 419 Query: 397 EESEATHYQL---GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 ++ + + Q+ YII+Q+T L I+DQHAAHER++F++ + I Sbjct: 420 RAAQGDDISMEERMLPIGQVDLTYIIAQSTATLYIIDQHAAHERILFDRF--SAQTDGIP 477 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 SQ +L I+ E I E+ E RLG E G + E PA + + ++ Sbjct: 478 SQQMLVHAILSFDAHEAQYIEENAELFDRLGFHLEAAGERTYRLTETPADVPTEEAEGII 537 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 R+I+ + D T E +ATMAC +I++G ++ +M LL E+ P C Sbjct: 538 REILASLGDLHTATPAN-LREAGIATMACRAAIKAGEELSIRQMEILLAELRATPFPFTC 596 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 HGRPT +K D+ K+F R Sbjct: 597 PHGRPTILKFGTHDLAKMFKR 617 >gi|326803737|ref|YP_004321555.1| DNA mismatch repair protein, C-terminal domain protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650557|gb|AEA00740.1| DNA mismatch repair protein, C-terminal domain protein [Aerococcus urinae ACS-120-V-Col10a] Length = 632 Score = 491 bits (1265), Expect = e-136, Method: Composition-based stats. Identities = 171/626 (27%), Positives = 292/626 (46%), Gaps = 40/626 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E++ NQIAAGE++ERP+ +KEL+EN++DA+++ ++ + G Q+ DNG G Sbjct: 2 IHELPEQVANQIAAGEVVERPASVVKELLENAIDAQATSIDIKVEEAGLKSIQVIDNGLG 61 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ E++ +A +RH TSKI S D I T GFRGEALPSI +V+ ++L + G+ Sbjct: 62 MSGEDVKLAFKRHATSKIYHSRDLFRIKTLGFRGEALPSIASVAEVSLET--SDGKEGSS 119 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G RP + GT + V +LF+ PARL +K E + ITDV+ R+A+A P Sbjct: 120 ISLIGGDEVEYRPSHLRQGTTIRVENLFYNTPARLKHIKQLSTELSHITDVVNRLAMARP 179 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + FT++ K+ + G E I+ V G + + + + ++ L GY P Sbjct: 180 DIRFTYTHDGR---KLLKTNGKGRLQEVIAAVYGFKQAQDMLAIENEDHDFQLSGYISKP 236 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + N +F+NGR +++ + +I YA + +GRYP+ VL + D + +DVNVH Sbjct: 237 ELTRASRNYMSLFVNGRYIKNYVLSQSIIKGYASKLMIGRYPIAVLNISTDAQLLDVNVH 296 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K IR + + I S+Q+ ++ + ++ HQ + Sbjct: 297 PTKQEIRISKEEELYDLIQSSVQERLSPLRRIPDIGKKEITETANHQASIDLKSQEDSQQ 356 Query: 361 SLTNTQEKLFLQENRL--------------------------------STNDLLPSDDPT 388 + + ++ EN ST + Sbjct: 357 LRFDFKNQVEPAENEAFLVKETDHGKDWQAETQTADQGKGAHRASFPPSTTTPSDLKPAS 416 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + + V+ + Q+ +Y++ G+ +VDQHAA ER+ +E R+ Sbjct: 417 PNHEEGQVQGQRNPSFPQLDYVGQLQASYLVCSDETGMYLVDQHAAQERIKYEYFREAIG 476 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 SQ LL P ++D E + + + + +GI E FGPN + PA + Sbjct: 477 DMDTASQELLVPLVLDYPSSESHDVRQVLDRIRAMGIGIEEFGPNQFLVNYHPAWMGSDQ 536 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 + + + +I I++ +++ E M+C SI++ + + +LL ++ Sbjct: 537 VQEHIDSMIQLAIENKD-FSVNTYREKTAIMMSCRFSIKANHYLDDRQARQLLDDLTYCE 595 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 N C HGRP I +IE+ F R Sbjct: 596 NPYNCPHGRPVLIHYSNYEIERSFKR 621 >gi|227824421|ref|ZP_03989253.1| DNA mismatch repair protein mutL [Acidaminococcus sp. D21] gi|226904920|gb|EEH90838.1| DNA mismatch repair protein mutL [Acidaminococcus sp. D21] Length = 628 Score = 491 bits (1265), Expect = e-136, Method: Composition-based stats. Identities = 169/630 (26%), Positives = 300/630 (47%), Gaps = 43/630 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K++ L + NQIAAGE++E+P +KEL+EN+LDA ++ V+ I GG + ++ DNG Sbjct: 4 KVQLLDQNTSNQIAAGEVVEKPMSVVKELVENALDAGATHVDVTIYEGGTEYIRVKDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E +AV RH TSKI ++D + T GFRGEALPSI +VSH L++R Sbjct: 64 GMDEENARLAVLRHATSKIVKAEDLLTLKTLGFRGEALPSIASVSHFNLLTREEGAEFAT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I I G + SV + + GT V V+DLF+ +PAR FL++ E I D++ +MA++ Sbjct: 124 SITIDGGENMSVDVMGGDVGTTVTVKDLFYNVPARRKFLRTVSTEGRYINDILSKMALSR 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V FT +G+ + I + G++ + + ++ + + I ++G+ Sbjct: 184 PDVHFTLQNNDKEVLN---TPGSGDELDVIGALYGKNVVEALLPVDHEQDGIRVKGFISR 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +G +F+N R + + + I AY IP +P +L L +D +D+NV Sbjct: 241 PTLLKGTRQWQTLFVNDRYIVSRMVSRAIDHAYQSQIPKSGFPFAMLKLTVDTHAIDINV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-----------------SSVLSKKMI 342 HP KS I+F + + + ++ A+ T S+ + I Sbjct: 301 HPQKSEIKFGDEQAVYRAVYHALTNALTHPMRGTENGKDEVTFKKPSPQKDESLAEEVSI 360 Query: 343 SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV------ 396 Q + P + + T E + +R T+++ + Sbjct: 361 FPHSQGRSFLPQNPAFGQPIWRTPEPQVERPDRSYTDEIFGAQRTVPRATEPHAITGEET 420 Query: 397 ------------EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 E + + Q+++ +I++Q+ L ++DQHAAHER+++++ Sbjct: 421 SGGIAGSVNERGEIQAPSGIDVIWPLGQVNRTFIVAQSETSLYLIDQHAAHERIMYDRF- 479 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 + SQTLL P + + + + EH ++ +LG+ AE G ++ + +PA + Sbjct: 480 -IRQQKPVPSQTLLMPLFLSVSAADVDAVTEHRDEFLKLGVDAEPAGETSLRVSALPADV 538 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 ++DI+ +++ + + D E +L AC+ +IR+G + +M ++ E+ Sbjct: 539 EDGEAEAFIQDILT-LLEENRSIKTSDLREEVLHYAACHSAIRAGELLNIRQMREVILEL 597 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP I++ ++ KLF R Sbjct: 598 LNTEHPFTCPHGRPCMIEVTTPELFKLFKR 627 >gi|322377273|ref|ZP_08051765.1| DNA mismatch repair protein HexB [Streptococcus sp. M334] gi|321281986|gb|EFX58994.1| DNA mismatch repair protein HexB [Streptococcus sp. M334] Length = 649 Score = 491 bits (1264), Expect = e-136, Method: Composition-based stats. Identities = 178/636 (27%), Positives = 308/636 (48%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKIQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVGLALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVEGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+ Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHH 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLASAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P+K +R + + ++I ++ ++ + ++ + + ++ +T LP Sbjct: 301 PSKQEVRISKEKELMTLVSEAISNSLKEQTLIPDALENLAKSTVRNRQKVEQTILPLKEN 360 Query: 361 SLTNT---------------------------------------QEKLFLQENRLSTNDL 381 +L KL E + D Sbjct: 361 TLYYENTEPTRPSQAEVADYQVELTDEGQDLTLFAKETLDQLTKPAKLHFAERKPVNYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E E++ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASLDKAYDKLEREESSSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMALLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|71904450|ref|YP_281253.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS6180] gi|71803545|gb|AAX72898.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS6180] Length = 673 Score = 491 bits (1264), Expect = e-136, Method: Composition-based stats. Identities = 176/650 (27%), Positives = 314/650 (48%), Gaps = 60/650 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +L E + NQIAAGE++ERP+ +KEL+EN++DA+SS++ I G Q+TDN Sbjct: 14 MTNIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQITVEIEESGLKMIQVTDN 73 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ E++P++++RH TSKI D I T GFRGEALPS+ ++S +T+ + + Sbjct: 74 GEGMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEALPSVASISKITIKTATKEVTH 133 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G+ + +G +I ++ ++ GT ++V +LF+ PARL ++KS Q E I DV+ R+++ Sbjct: 134 GSLLIATGGEIETLEAISTPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSL 193 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P+V+FT + ++ S G+ + I+ + G + + ++ + + GY Sbjct: 194 AHPEVAFTLISDGR---QLTQTSGTGDLRQAIAGIYGLNTTKKMLAISNADLDFEVSGYV 250 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P R N N + +NGR +++ + I Y + +GR+P+VV+ ++IDP DV Sbjct: 251 SLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADV 310 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +R + I +I +++ ++ + ++ + S+ H +T LP Sbjct: 311 NVHPTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKPEQTQLPL 370 Query: 358 YATSL--TNTQEKLFLQENRLST------------------------------------- 378 L + F +E+ +S Sbjct: 371 QFRGLYYDPQKNDFFAKESAVSEKIPETDFYFGAVDNSVKVEKAELLPHSEEVIGPSSVK 430 Query: 379 --------------NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 +L + S+ +E E + + Q+H Y+ +Q D Sbjct: 431 HASRPQNTFIETDHPNLDLKNRQKLSQMLTRLENEEQSVFPELDYFGQMHGTYLFAQGKD 490 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL I+DQHAA ER+ +E R + Q LL P + + + + E L+ +G Sbjct: 491 GLFIIDQHAAQERVKYEYYRDKIGEVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVG 550 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 I E +G N +RE P + ++ I + ++ D ++ ++ +++ + M+C Sbjct: 551 IFLEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEV-SIKTYRAELAIMMSCKR 609 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ + LL ++ + N C HGRP I +D+EK+F R Sbjct: 610 SIKANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRR 659 >gi|186477234|ref|YP_001858704.1| DNA mismatch repair protein [Burkholderia phymatum STM815] gi|184193693|gb|ACC71658.1| DNA mismatch repair protein MutL [Burkholderia phymatum STM815] Length = 691 Score = 491 bits (1264), Expect = e-136, Method: Composition-based stats. Identities = 187/657 (28%), Positives = 311/657 (47%), Gaps = 72/657 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA ++ + ++ GG ITD+G G Sbjct: 40 IQPLPDQLISQIAAGEVVERPASVVKELLENALDAGATALRILLDEGGVKRISITDDGCG 99 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ +A+ RH TSKI + + T GFRGEAL SI +VS + + SR + + Sbjct: 100 IPEGELALALMRHATSKIRSLAELEAVATLGFRGEALASIASVSEMHITSRTETVSHATR 159 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + ++ P A GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 160 I---DAQTGALSPAAGTRGTTIEVRELYFNTPARRKFLKSEQTELGHCLEMIRRAALARP 216 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N + R+++++GE F + + L+E + + + G G+P Sbjct: 217 DVAISVLHNGRAVEHWNA----SDPATRVAKILGETFASAHLPLDESAGPLAVYGCAGLP 272 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 273 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 332 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV------LSKKMISSFHQDNAPKTH 354 P+K +RFR+ I F+ ++Q+A+ + ++ + + S + T Sbjct: 333 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTSGGHAARIEPMPSASPVSTFSTG 392 Query: 355 LPKYATSLT------------NTQEKLFLQENRLSTNDLLPSDDPT-------------- 388 P S + ++++ R++ L + Sbjct: 393 TPASFGSAPLGAGFRVGDGGGSQPGNTWMRQARMTQGTLPVAQPLALYDALFGRKDSGAG 452 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH---------------- 432 S+ +E +A G ++ +Q + H Sbjct: 453 TSQGTTSLELRDAADAADGAVAPLPFGSFATAQPFAAAQSFNPHDEQPLGFALGQIHGIY 512 Query: 433 ----------AAHERLIFEKMRQDFNSTKI-----TSQTLLTPEIIDLLEGECALIMEHD 477 E++ + + Q LL P + E ++ E Sbjct: 513 VLAQNARGLVIVDMHAAHERILYEQFKNALADRAIAVQPLLIPVSMTADAVEIGVVEEER 572 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 E L LG P IAIR +PA+L ++ L R ++ ++ + L +R +L Sbjct: 573 ETLDALGFDLAVLSPTTIAIRAVPALLKDADLQALARAVLSDLHAYGGSRVLTERQHELL 632 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRPT+ +L L+D+++LF R Sbjct: 633 GTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLADLDRLFMR 689 >gi|297530517|ref|YP_003671792.1| DNA mismatch repair protein MutL [Geobacillus sp. C56-T3] gi|297253769|gb|ADI27215.1| DNA mismatch repair protein MutL [Geobacillus sp. C56-T3] Length = 630 Score = 491 bits (1263), Expect = e-136, Method: Composition-based stats. Identities = 177/631 (28%), Positives = 297/631 (47%), Gaps = 43/631 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IRKL + + N+IAAGE++ERP+ +KEL+EN++DA S+ + + G + ++ DNG Sbjct: 3 RIRKLDDLLANKIAAGEVVERPASVVKELVENAIDAHSTVINIELEEAGMAKIRVIDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A +RH TSKI + D I T GFRGEALPSI +VS + L + G Sbjct: 63 GMEEDDCLLAFERHATSKIHNEHDLFRIRTLGFRGEALPSIASVSEVELT-TGTGSGPGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G + S A GT + V +LFF PARL ++K+ E DV+ R+A+A+ Sbjct: 122 KLVLQGGALVSRERAAGRKGTDITVSNLFFNTPARLKYMKTIHTELGHAADVVNRLALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF + + +G+ ++ + G + + + +S + T++GY Sbjct: 182 PDVSFRLRHQGK---TLLATNGSGDVRHVLAAIYGAETARQMIPIEAESLDFTVRGYISP 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR V+ ++ I Y +P+GRYP+V L +E+DP VDVNV Sbjct: 239 PDVTRASRNYISLVVNGRYVRSVPLMKAIEAGYHTLLPIGRYPIVFLSIEMDPVLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI-SSFHQDNAPKTHLPKY 358 HPAK +RF + + +I++A ++ + S KM Q TH + Sbjct: 299 HPAKLEVRFSKEAELNELVTDAIRQAFRERTLIPSVSADSKMAKPKAEQAAWTFTHRVRE 358 Query: 359 ATSLTN-----------------------------------TQEKLFLQENRLSTNDLLP 383 + L++ E E + + Sbjct: 359 PSVLSSDIGGGEDATAPLAPLTGDAPAERPSAAVQTDECGIPDEHGPAFERKQEEEEGEE 418 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 P D +++ A Q+H YI+++ GL ++DQHAA ER+ +E Sbjct: 419 RCSPRLPTDGQAEDKAAADRLPPLYPIGQLHGTYILAENEHGLYMIDQHAAQERINYEYF 478 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 R+ Q LL P + + E I ++L R G+ E FGP A +R P Sbjct: 479 REKLGEATKEVQELLVPLMFEYPADEYERIAACRDELARCGVFLEPFGPRAFLVRSHPTW 538 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 K +++ ++I++ + + T ++ E M+C +I++ + ++ E+ LL Sbjct: 539 FPKGREKEIIEEMIEQALAAKTVD-IKQLREQAAILMSCKRAIKANQHLRQDELFALLEA 597 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + + C HGRP + +IEKLF R Sbjct: 598 LRQTTDPFTCPHGRPIIVHFSTYEIEKLFKR 628 >gi|330831909|ref|YP_004400734.1| DNA mismatch repair protein MutL [Streptococcus suis ST3] gi|329306132|gb|AEB80548.1| DNA mismatch repair protein MutL [Streptococcus suis ST3] Length = 645 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 176/632 (27%), Positives = 302/632 (47%), Gaps = 44/632 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAG IERP+ +KEL+ENS+DA +S++E + G QITDNG G Sbjct: 4 IIELPEILANQIAAGGGIERPASVVKELVENSIDAGASQIEISVEEAGLKMIQITDNGEG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI D I T GFRGEALPSI +VSH+ + + + G Sbjct: 64 IAPDEVALALRRHATSKIKNQSDLFRIRTLGFRGEALPSIASVSHMIIETATADSAHGLH 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G I PV+ GT + V DLF+ PARL +++S+Q E + I DV+ R+++A+P Sbjct: 124 LEAKGGVIEKEEPVSRPVGTQITVSDLFYNTPARLKYVRSQQAELSHIVDVVNRLSLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++F ++ + G + IS + G VE+ + + + GY +P Sbjct: 184 EMAFALVNEGR---ELIRTAGTGKLRQAISGIYGIASAKKMVEIEAEDLDFQISGYVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ +EIDP DVNVH Sbjct: 241 ELTRANRNYISIFINGRYIKNFLLNRAILEGYGSKLMVGRFPLAVISIEIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + I ++I +A+ ++ + ++ + S+ + A + LP Sbjct: 301 PTKQEVRISKEKELMTLIREAISQALKEQDLIPDALENLAQSSTRPKVKAEQGTLPLREP 360 Query: 361 -----------------------------------SLTNTQEKLFLQENRLSTNDLLPSD 385 N + E + ++ Sbjct: 361 KIYYDTIKQDFFLKPDVVAEDVKPLEEDRQEIVESPAENKPTSVQFAERQSVESEDQEHP 420 Query: 386 DPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 + + E D ++ + + Q+H Y+ +Q GL I+DQHAA ER+ +E Sbjct: 421 NLSAKELAKLADKLDREATSTFPELEYFGQMHGTYLFAQGKTGLYIIDQHAAQERVKYEY 480 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 R+ ++Q LL P I + + + ++ + L ++G+ E +G N +RE P Sbjct: 481 YREKIGQVDNSAQQLLVPYIFEFPQNDALDLVHKMDALRQVGVNLEEYGSNQFILREHPI 540 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 + ++ I + ++ D ++ + +++ + M+C SI++ + LLR Sbjct: 541 WMKEEEIESGIYEMCDMLLLTDQV-SIKQYRAELAIMMSCKRSIKANHALDDYSARDLLR 599 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ N C HGRP + SD+EK+F R Sbjct: 600 QLSYCQNPYNCPHGRPVLVHFSKSDMEKMFRR 631 >gi|255530395|ref|YP_003090767.1| DNA mismatch repair protein MutL [Pedobacter heparinus DSM 2366] gi|255343379|gb|ACU02705.1| DNA mismatch repair protein MutL [Pedobacter heparinus DSM 2366] Length = 623 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 171/622 (27%), Positives = 304/622 (48%), Gaps = 37/622 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ A+KEL+EN++DA +++++ ++ GK+ Q+ DNG G Sbjct: 5 IQLLPDSVANQIAAGEVVQRPASAVKELLENAIDAGANKIQLLVKDAGKALIQVIDNGCG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + M +RH TSK+ +D I T GFRGEA+ SI A++ + + +R G Sbjct: 65 MSVTDARMCFERHATSKVRKAEDLFAIRTMGFRGEAMASIAAIAQVEMKTRKHDEELGTV 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G PVA + GT + +++LF+ PAR NFLKS E I D +R+++A+P Sbjct: 125 IEIEGSVFVKQEPVACSEGTSISIKNLFYNTPARRNFLKSNPAEMRHIIDEFQRISLAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F+ Y++ +RI + G ++ + + E+++ I L+GY G P Sbjct: 185 SIAFSLHHDGVEIYRLPA----SVLKQRIVHLFGNNYNERLIPVEEETSIINLKGYIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + F+N R ++D ++ + AY E + +P+ VL ++IDP +DVNVH Sbjct: 241 EFAKKTRGEQFFFVNNRFIKDAYLNHAVNKAYEELLADDHFPLYVLFIDIDPANIDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ I++ + I + +I++++ + IS + ++ S + + + Sbjct: 301 PTKTEIKYLDEKSIYAILHSAIKRSLGRFNISPTIDFDQETGFSNMITHKAPEEIVPPSI 360 Query: 361 SLTNTQEKLFLQENRLSTN----------------------------DLLPSDDPTYSED 392 S + S + ++ + T S Sbjct: 361 SFNPDFNPFAEDKPSPSRDAAYASFPKSYGGGGGNIKPSTKNWGSLYEIANHNPETQSAL 420 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + P + + + Q+H YIISQ GL+++DQ AAHER+++E+ K Sbjct: 421 DLPADPAGHQFSPVQKQLMQLHNRYIISQIKSGLMLIDQQAAHERILYERFTLHLEDRKG 480 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI--P 510 SQ L P+ + L + L ED+ LG + FG N + I IP L NI Sbjct: 481 ASQQSLFPQTVTLSPNDYELAKSLLEDIKSLGFEVREFGKNTLVIEGIPVDLGGGNINET 540 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 QL +I+ +S L D+ + + +MA +I++G + EMN L+ ++ Sbjct: 541 QLFEHLIEGFKNSQQELKL-DKRDALARSMARNSAIKNGTVLGQEEMNTLIEQLFACKTP 599 Query: 571 SQCNHGRPTFIKLKLSDIEKLF 592 + G+P + L++++K F Sbjct: 600 NFSISGKPVIQTIGLAELDKKF 621 >gi|313677400|ref|YP_004055396.1| DNA mismatch repair protein mutl [Marivirga tractuosa DSM 4126] gi|312944098|gb|ADR23288.1| DNA mismatch repair protein MutL [Marivirga tractuosa DSM 4126] Length = 615 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 186/615 (30%), Positives = 314/615 (51%), Gaps = 30/615 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + I NQIAAGE+++RP+ +KEL+ENS+DA SS+++ V+ GK Q+ D+G G Sbjct: 5 IQLLPDAIANQIAAGEVVQRPASVVKELLENSIDAGSSKIKLVVKDAGKQLIQVIDDGAG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + M +RH TSKI SDD + T GFRGEA+ SI AV+ + L ++ G Sbjct: 65 MSETDARMCFERHATSKIRKSDDLFALKTMGFRGEAMASIAAVAQVELKTKTADAELGVL 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I +I + GT + V++LF+ +PAR NFLKS VE I D R+A+A P Sbjct: 125 LEIEASEIKNQSHTTHTGGTTISVKNLFYNVPARRNFLKSNPVEMRHIIDEFHRVALANP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + Y++N G +RI + G+++ V E ++++ + GY G P Sbjct: 185 QVAFSLHQNDMDVYQLNA----GKLSQRIVGLFGKNYQEQLVACEETTDQLKIYGYIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + F+N R ++ ++ + + + +P VL LEIDP+++DVNVH Sbjct: 241 EFAKKTRGEQFFFVNNRYIKSGYLHHAVVNGFEGLLAKEAHPFYVLCLEIDPKRIDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN----------- 349 P K+ I+F + ++ + +I++A+ ++ + + SF+ Sbjct: 301 PTKTEIKFDDERMVYGILAAAIRQALGAHNVAPALDFDSDVNFSFNAPRRNQVDDFSRKT 360 Query: 350 -------APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 PK + ++ L+N QE D+ + + + EE+E+ Sbjct: 361 TNYQKFKQPKDNDGEWDKILSNFQELSQKISEEEENEDIADESQQSMTFGSAINEENESK 420 Query: 403 HYQLGIA-----CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 Q QIHQ YI +Q GL++VDQ AAHER++FEK + ++ +SQ Sbjct: 421 VPQSERVEAKSSIFQIHQKYIATQVKSGLMLVDQQAAHERILFEKFNRHLQNSDGSSQQF 480 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L PE + L + AL+M+ +E+L LG FG + + I P L+ ++ + +I Sbjct: 481 LFPEQVQLSAPDYALVMDMEEELKALGFVISSFGKDTVVINGAPTELTDTSVKSVFEGLI 540 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D+ + ++ + ENI ++A +IR+G K+ + EMN L+ ++ N + G Sbjct: 541 DQFKHNKNVLSV-SKNENIARSLAKRSAIRAGHKLNAEEMNALIDKLFACQNPNYAPSGN 599 Query: 578 PTFIKLKLSDIEKLF 592 TFI L+ I F Sbjct: 600 STFIIFDLNKIASFF 614 >gi|293603562|ref|ZP_06685983.1| DNA mismatch repair protein MutL [Achromobacter piechaudii ATCC 43553] gi|292817998|gb|EFF77058.1| DNA mismatch repair protein MutL [Achromobacter piechaudii ATCC 43553] Length = 656 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 194/656 (29%), Positives = 324/656 (49%), Gaps = 70/656 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L + +I+QIAAGE+IERP+ +KE++EN++DA +E + GGG +TD+G Sbjct: 6 SILALPDLLISQIAAGEVIERPASVLKEILENAIDAGGRAIEVRLEGGGIRRIAVTDDGG 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A+ RH TSKI + ++ + GFRGEAL SI +V+ +T++SR Sbjct: 66 GIPPDELPLALARHATSKIRSLNELESVASMGFRGEALASIASVAQVTIISRTRDGEHAW 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ P + PGT V+VR LF +PAR FL+SE E D + R+A+A+ Sbjct: 126 QIDAGSMQV---SPASGPPGTTVDVRQLFDAVPARRKFLRSEATEFGHCVDAMERIALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++F + + +RI V+G +F + + L+ ++L G Sbjct: 183 PQIAFRLFHHDRAQRQWLPAEPP----QRIRDVLGAEFAEHGLLLSHSVGTVSLAGMITR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT R A++ Y+++NGR V+D+ + +R AYA+ + R P VL L+IDP VDVNV Sbjct: 239 PTAARARADRQYLYVNGRYVRDRTVSHALRAAYADVLHGDRQPAYVLFLDIDPAAVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI----------------- 342 HPAK +RFR+ + F+ ++ + + + G S++ +++ Sbjct: 299 HPAKHEVRFRDSGAVHRFVSHAVGQTLAQTGGSSAVAPAQQEAAVQADAGTGGQANADED 358 Query: 343 --------------------------------SSFHQDNAPKTHLPKYATSLTNTQ--EK 368 + NA P +TQ + Sbjct: 359 GDFETVARAPAATHAGASLSNGGAAPAADAARPGYSGQNAAYGLRPSPPAQRAHTQVPFR 418 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 L + + D P + V + + H + G+ I Sbjct: 419 LHAEPAGIPAADWQSLYRPLNDDTATKVTPVSEPRPAPTLPADEEHPLGMALAQLHGIYI 478 Query: 429 VDQHAA----------HERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + Q+ HER+++E+++Q ++ + Q LL P + E + ALI E +E Sbjct: 479 LAQNRRGMVLVDMHAAHERVVYEQLKQALDTRSLPRQDLLVPVVFHAQEKDVALIEEFEE 538 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L LG + GP +IA+R +PAIL++ +I L R ++ ++ + L ++ +L+ Sbjct: 539 QLGELGFEMRPSGPTSIAVRSVPAILARGDIETLARAVLRDLGAVGVSRLLTEQRNELLS 598 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 TMAC+GS+R+ R++ EMN LLR+ME + QCNHGRPT+++ +SD++KLF R Sbjct: 599 TMACHGSVRANRRLTIEEMNGLLRQMEATERADQCNHGRPTWVQWSVSDLDKLFLR 654 >gi|296161798|ref|ZP_06844600.1| DNA mismatch repair protein MutL [Burkholderia sp. Ch1-1] gi|295887962|gb|EFG67778.1| DNA mismatch repair protein MutL [Burkholderia sp. Ch1-1] Length = 682 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 180/658 (27%), Positives = 300/658 (45%), Gaps = 73/658 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELLENALDAGAQSLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ +A+ RH TSKI + + T GFRGEAL SI +V+ +T+ SR + Sbjct: 90 IPENELALALMRHATSKIRSLAELEAVATLGFRGEALASIASVAQMTITSRTADAAHAVR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + + P A GT +EVR+L+F PAR FLKSEQ E + IRR A+A P Sbjct: 150 V---DAQTGVLSPAAGTQGTTIEVRELYFNTPARRKFLKSEQTELGHCLEQIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E + + + G G+P Sbjct: 207 DVAISVLHNGKAVEHWNASEPP----VRVAKILGDTFATAHLPLDESAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 263 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGERYPSYVLFLDLPPEAVDVNVH 322 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA- 359 P+K +RFR+ I F+ ++Q+A+ + ++ + + Sbjct: 323 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHLEPSVGGPASFGATPL 382 Query: 360 ---------------------------TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE- 391 S + ++++ R++ L + + + Sbjct: 383 GGAGVGGVGFGAGNGAGGLGGASGGGFGSSSQQPGNTWMRQARMTQGTLPVAQPLAFYDA 442 Query: 392 -----------------DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH-- 432 +EA A + + G + H Sbjct: 443 LFGRKETNAGTAEGATLFEARDSAAEAPSPYNASAPYPAPAFHAADEQPLGFALGQIHGI 502 Query: 433 -----------AAHERLIFEKMRQDFNSTKI-----TSQTLLTPEIIDLLEGECALIMEH 476 E++ + + Q LL P+ + E + E Sbjct: 503 YVLAQNAHGLVIVDMHAAHERILYEQFKNALADRTIAVQPLLIPQSMQADPIEIGTVEEE 562 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 + L LG P +AIR +PA+L ++ L R ++ ++ + L +R + Sbjct: 563 RDTLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLSDLHAFGGSRVLTERQHEL 622 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRPT+ +L LSD+++LF R Sbjct: 623 LGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLSDLDRLFMR 680 >gi|153657|gb|AAA88600.1| mismatch repair protein [Streptococcus pneumoniae] Length = 649 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 181/636 (28%), Positives = 311/636 (48%), Gaps = 48/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVCKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I + + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMTLVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K S + E KL E + + D Sbjct: 361 TLYYEKTEPSRPSQTEVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASIDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E+ R+ + + Q LL P I + + + E L +G+ +G N +R Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILR 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E P ++++ I + ++ D ++ + +++ + M+C SI++ ++ Sbjct: 541 EHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSAR 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LL ++ + N C HGRP + SD+EK+F R Sbjct: 600 QLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 635 >gi|51474047|ref|YP_067804.1| DNA mismatch repair protein [Rickettsia typhi str. Wilmington] gi|81826273|sp|Q68VN4|MUTL_RICTY RecName: Full=DNA mismatch repair protein mutL gi|51460359|gb|AAU04322.1| DNA mismatch repair protein MutL [Rickettsia typhi str. Wilmington] Length = 600 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 230/599 (38%), Positives = 369/599 (61%), Gaps = 6/599 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE IN+IAAGE+IERP+ +KEL+EN++D S++++ ++ GK+ ++D+G Sbjct: 1 MTIKFLSESTINRIAAGEVIERPASVVKELVENAVDGGSTKIDIILERAGKNLIIVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK+++ DF NIHTFGFRGEALPSI A+S + + S+ + + Sbjct: 61 IGMTDKELEIAVERHTTSKLNESDFLNIHTFGFRGEALPSIAAISKMLITSKKREADKAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G + N GT +E+RDLFF PARL FLKS++ E D+++++A+A+ Sbjct: 121 QIKLIGGNKQQITVSVHNEGTKIEIRDLFFATPARLKFLKSDRTELAASLDIVKKIALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTN--GNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 PK+SF N K+ Q+ + N +RI VIG+ FI NA +N K+ + ++ GYT Sbjct: 181 PKISFNLIHNSKNLLKLKGQNKDFETNLKQRIIDVIGDVFIKNASYINFKTPDFSICGYT 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 IPT++R ++ ++FIN R ++DK + +R AY + + RY + + L+IDP+ VDV Sbjct: 241 SIPTYSRASSEDQFLFINNRPIKDKLLQVALRVAYQDYLARDRYALCAIFLQIDPQLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI-NKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 NVHPAK+ +RF +P +RN +I++I+ A+ NK ++ ++ + ++ + + P + Sbjct: 301 NVHPAKAEVRFHDPNYVRNILIEAIKNALTNKSQVTVTTTDAIELFKNPLVNKQPPINKA 360 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT-HYQLGIACAQIHQ 415 S + N + L SD ++++ Y+ GIA AQ+H Sbjct: 361 INVNSKASEYISFNFNRNTVCQKLTLQSDKIEQEVGKCIEHDNQSYKQYKFGIAKAQLHT 420 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE-GECALIM 474 YIISQT D +VI+DQHA +ERL +EK++ + ++ Q LL PEI++L + + Sbjct: 421 TYIISQTEDSIVIIDQHAVYERLGYEKIKYCLKNGELVKQRLLIPEIVELSSGEKADYLY 480 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 E+ + L +L + E+FG +I + E+P +L N+ +L++D+ D + D S L++ IE Sbjct: 481 ENRDKLFKLSLTIEKFGEKSIIVTEVPNLLRDVNVQKLIQDLADHLSDFSKNIALKELIE 540 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 +++ C+ SIR+ RK+ EMN LLR+ME S+QCNH RPT+I+LKL DIE+LF Sbjct: 541 HVIKIYICHYSIRAVRKLSVDEMNSLLRQMENMSFSAQCNHNRPTYIELKLKDIERLFR 599 >gi|110636441|ref|YP_676648.1| DNA mismatch repair protein [Cytophaga hutchinsonii ATCC 33406] gi|122967050|sp|Q11Z58|MUTL_CYTH3 RecName: Full=DNA mismatch repair protein mutL gi|110279122|gb|ABG57308.1| DNA mismatch repair protein MutL [Cytophaga hutchinsonii ATCC 33406] Length = 610 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 177/611 (28%), Positives = 305/611 (49%), Gaps = 25/611 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + I NQIAAGE+++RP+ +KEL+ENS+DA S+ ++ ++ GK Q+ DNG G Sbjct: 5 IRLLPDNIANQIAAGEVVQRPASVVKELLENSVDAGSTNIQLIVKDAGKQLIQVIDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + + +RH TSKI DD I TFGFRGEA+ SI +V+ + + ++ P N G Sbjct: 65 MSDGDARLCFERHATSKIRSADDLFAIRTFGFRGEAMASIASVAQVEMKTKLPGNELGTL 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G I A GT + V++LF+ +PAR NFLKS VE I D R+A+A+P Sbjct: 125 IRIEGSAILVHEQTAHPQGTSISVKNLFYNVPARRNFLKSNSVEMRHIMDEFVRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+F + + +R ++G + + E+++ +++ GY G P Sbjct: 185 EVAFSFYHNDLELFNVP----EETLSKRAVSLLGGSYREQLIPCKEETDFVSISGYIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+N R ++ ++ + A+ E IP +P +L +EIDP +DVNVH Sbjct: 241 ESARKTRGDQYFFVNNRYIRSNYLHHAVMHAFEELIPTDAFPFYLLFIEIDPAHIDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS------------------KKMI 342 P K+ I+F + + I +++++ I S ++ Sbjct: 301 PTKTEIKFDDEKTVYAIIKACVKRSLGTHNIMPSLDFDFNVNVSGFTGMGLSDSSGRESN 360 Query: 343 SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 ++F + + + + + L+ NR + D + S+ Sbjct: 361 TNFTPKSFSTSDSIQRSNQSNWERMYSGLENNREEVYQESIKMVSAINGTEDLKQLSKEQ 420 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 Y + Q+HQ YI++Q G+++VDQ AAHER++FEK + +SQ L P+ Sbjct: 421 LYTENTSTFQLHQKYIVTQVKSGVLLVDQQAAHERILFEKYIGMLQNRFGSSQQFLFPQT 480 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 ++L + A+++E +ED+ +LG F I + +P+ + N L +I++ Sbjct: 481 LELSAADFAMVVEMEEDIRKLGFVFNVFSNTTIVVNGVPSDVKSGNEKNLFEGLIEQFKQ 540 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 + T + DR EN+ ++A +IR+G K+ +EMN ++ ++ + + G T + Sbjct: 541 NRTDLKI-DRQENLARSLAKRSAIRAGNKLSLMEMNSIIDQLFACKSPNYAPDGNLTVVM 599 Query: 583 LKLSDIEKLFG 593 L + I +LF Sbjct: 600 LDMDKIGRLFM 610 >gi|311748627|ref|ZP_07722412.1| DNA mismatch repair protein MutL [Algoriphagus sp. PR1] gi|126577153|gb|EAZ81401.1| DNA mismatch repair protein MutL [Algoriphagus sp. PR1] Length = 616 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 188/616 (30%), Positives = 322/616 (52%), Gaps = 30/616 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + I NQIAAGE+++RP+ A+KEL+ENS+D+ +++++ V+ GK Q+ DNG G Sbjct: 5 IQLLPDAIANQIAAGEVVQRPASALKELLENSIDSGATKIQVVVKDAGKQLIQVIDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + M+ +RH TSKI D +I TFGFRGEAL SI AV+ + L ++P + G Sbjct: 65 MSPTDARMSFERHATSKIRSSKDLFSIRTFGFRGEALASIAAVAQVELKTKPANADLGTL 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G +I + P+A GT V +++LFF +PAR NFLKS VE + D +R+A++YP Sbjct: 125 IQIEGSEIKNQEPIAATEGTSVCMKNLFFNVPARRNFLKSNPVEMRHLVDEFQRVALSYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + G +RI + G+++ V E + I ++GY G P Sbjct: 185 EISFSLYQQDLEMFNLLP----GKLSQRIVGLFGKNYQGQLVPCEELTPHINIKGYIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + + F+N R ++ ++ + A+ I ++P VL LEIDP +D+NVH Sbjct: 241 ENAKKTRGEQFFFVNNRYIKSSYLNHAVSNAFEGLIQSDQHPFYVLFLEIDPSHIDINVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT------- 353 P K+ I+F + + I ++++A+ + S S + + + D P+ Sbjct: 301 PTKTEIKFDDERTVYAVIRSAVKQALGAHHVVPSLDFSFDVNYTENWDKNPEKKEQVDRE 360 Query: 354 ------HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE---DNDPVEESEATHY 404 + P++ S + EKLF T + ++ E V E+ + Sbjct: 361 YSYKSYNTPEFKKSSASGWEKLFEGNTPQKTQEQPRDENEEEPEVLTFPSRVNPEESQDF 420 Query: 405 QLGIAC-------AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 I+ Q+ +YI++Q + G++I+DQ AHER+++E+ + NS + SQ Sbjct: 421 FPKISVEESTGTTFQVELSYIVAQLSTGMLILDQQIAHERILYERYTKQLNSAQGPSQQC 480 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P + L + AL+M+ +LH LG FG + I I+ +PA + K+ L ++ Sbjct: 481 LFPPTVVLSASDFALVMDILPELHSLGFMVSEFGKDTIIIQGVPADIQPKSEKDLFESLL 540 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 ++ + ++ D+ EN+ ++A S++ G+K+ EM L+ ++ N + G Sbjct: 541 EQFKNFKNELSI-DKRENLARSLARKSSLKRGQKLTPQEMETLVGQLFACQNPNYGLSGN 599 Query: 578 PTFIKLKLSDIEKLFG 593 TF+KL LS I FG Sbjct: 600 KTFVKLDLSSIHSFFG 615 >gi|295110016|emb|CBL23969.1| DNA mismatch repair protein MutL [Ruminococcus obeum A2-162] Length = 674 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 184/673 (27%), Positives = 310/673 (46%), Gaps = 87/673 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + I++IAAGE++ERPS +KEL+EN++DA ++ V I GGK +ITDNG Sbjct: 7 KIAVLDQNTIDKIAAGEVVERPSSVVKELVENAIDAGATAVTVEITDGGKKLIRITDNGS 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM SE+IP+A RH TSKI +D +I + GFRGEAL SI AVS + L+++ P + +G+ Sbjct: 67 GMESEQIPLAFLRHATSKIEKVEDLEHIASLGFRGEALSSIAAVSQVELITKTPSDISGS 126 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G K ++ + GT VR+LF+ PAR FLKS+ E N I ++ ++A+++ Sbjct: 127 RYVIEGGKEIALEELGAPEGTTFLVRNLFYNTPARSKFLKSDMTEANYIHTLMEQLALSH 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF + K + S N + + I V G + +++N +++ + ++G+ G Sbjct: 187 PEISFKYIQNKQVKLH---TSGNYSVKDVIYSVYGREIAKALLDVNYENSFMKVEGFVGK 243 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P RGN + +INGR V++ I I AY + ++P V L +E++ +DVNV Sbjct: 244 PEIARGNRSFENYYINGRYVKNNIITKAIENAYRGFLMQHKFPFVSLRMEMEGNDLDVNV 303 Query: 300 H----------------------------------------PAKSYIRFRNPTIIRNFII 319 H PAK+ I + Sbjct: 304 HPAKREVRFAREQEVYDAVYDMVRSALTRKEMIPKVSVDSTPAKTET---KEEKITRAAV 360 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQ------------------------DNAPKTHL 355 + ++ + ++V ++ +S + + + Sbjct: 361 PEPFETKRREEMYPNTVRKPEVQASLNPKPEVRDGSNARTEIRKPFSQGTQSETIVREPA 420 Query: 356 PKYATSLTNTQEKLF---LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG----- 407 +Y + + +E++F L+EN+ + ++ E + Sbjct: 421 AEYRPAFSEAEEEMFSGTLRENQKLDEEKKQAELKLTEEPEKKQAPPQQLELFEEKLLAP 480 Query: 408 ------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 QI Y + Q D I+DQHAAHE++ +E+M + F I SQ L P Sbjct: 481 ESRSRIRVVGQIFDTYWLVQFEDNFYIIDQHAAHEKVYYERMVKQFREHSIDSQYLSPPM 540 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 I+ L E ++ + + + G + E FG I +P+ L L +++D + Sbjct: 541 IVTLSMQEEEVLNSNKDYFEQFGFEIENFGGREYRISAVPSNLYGLTEEDLFLEMLDNLS 600 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 +++ L D + LATMAC +++ M E +L+ E+ N C HGRPT I Sbjct: 601 GNNSRDAL-DIFASKLATMACKAAVKGNHAMSFEEAEKLIDELLTLDNPYHCPHGRPTII 659 Query: 582 KLKLSDIEKLFGR 594 + +++EK F R Sbjct: 660 AMTRTELEKKFKR 672 >gi|110801747|ref|YP_698494.1| DNA mismatch repair protein [Clostridium perfringens SM101] gi|123341838|sp|Q0STR3|MUTL_CLOPS RecName: Full=DNA mismatch repair protein mutL gi|110682248|gb|ABG85618.1| DNA mismatch repair protein MutL [Clostridium perfringens SM101] Length = 674 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 182/674 (27%), Positives = 314/674 (46%), Gaps = 85/674 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L+ N+IAAGE++ERPS +KEL+ENSLDA + + I GG+S +I D+G Sbjct: 3 RINILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A H TSKI D D +I+T GFRGEALPSI +++ + S+ + G Sbjct: 63 GVHPEDVEKAFNPHATSKIKDTYDIFSINTLGFRGEALPSIASIARVDFKSKTEDFDMGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ISG + S+ +MN GT +EVR+LFF +PAR FLK+ E+ LI D++ R+++A Sbjct: 123 ELIISGGEKESLTDCSMNRGTQIEVRNLFFNVPARKKFLKTTARESALINDLVNRISLAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF K+ NG + I + G+ N + E + ++ G+ G Sbjct: 183 PDVSFKLFNNNK---KILNTYGNGKLIDVIRTIYGKSTAENLIYFEEHKDTASVYGFIGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 T R + N +F+N R V+++ + + A+ G++P VL ++ P +DVN+ Sbjct: 240 DTLARASRNNQSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNI 299 Query: 300 HPAKSYIRFRNPT----IIRNFIIQSIQKAINKKGIST---------------------- 333 HP KS I+F++ ++ + + ++++ + Sbjct: 300 HPTKSEIKFKDERFIFKLVFDAVHSAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDKE 359 Query: 334 ---------------SSVLSKKMISSFHQDN-----------------APKTHLPKYATS 361 S K+ I S++ + K+ S Sbjct: 360 ISTLEKLKENINYKVSDDKRKEEIYSYNPSKDYEAKTEVNIPVDFLSKENQEESSKFNNS 419 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL--------------- 406 L N K + +S + +L ++ + + E++ Y+ Sbjct: 420 LENNDFKEVSAKREISYDPILIKNELKDKVSENTYDSLESSDYKCNKNEYGNSLEERIYR 479 Query: 407 ------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 Q ++ YI+++ L ++DQHAAHE+++FEK D K+ Q L+ P Sbjct: 480 EAKFPKLKVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIP 539 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 ++ L + E+ E + G K FG N+I I E+P L K N +L+ +I+ + Sbjct: 540 LVVTLPTEDYLYYDENKEIFEKAGFKISDFGDNSIRIEEVPYFLDKLNPTELIISMINNL 599 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 T T++ + I A+M+C ++++ + +EM L+ ++ + C HGRPT Sbjct: 600 KKMGTGETVEVKYNKI-ASMSCRAAVKANDVLSILEMENLIEDLRYINDPFHCPHGRPTI 658 Query: 581 IKLKLSDIEKLFGR 594 IK +++K F R Sbjct: 659 IKFTSYELDKKFKR 672 >gi|312892181|ref|ZP_07751678.1| DNA mismatch repair protein MutL [Mucilaginibacter paludis DSM 18603] gi|311295311|gb|EFQ72483.1| DNA mismatch repair protein MutL [Mucilaginibacter paludis DSM 18603] Length = 618 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 176/619 (28%), Positives = 308/619 (49%), Gaps = 34/619 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ A+KEL+EN++DA + +++ ++ GKS Q+ DNG G Sbjct: 5 IQLLPDSVANQIAAGEVVQRPASAVKELVENAIDAGADKIQLILKDAGKSLIQVIDNGCG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + M +RH TSKI +D I T GFRGEA+ SI A++ + L +R ++ G Sbjct: 65 MSLTDARMCFERHATSKIRKAEDLFAIRTMGFRGEAMASIAAIAQVELKTRRFEDELGTL 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G ++ + N GT + +++LF+ IPAR NFLK VE I D +R+A+A P Sbjct: 125 IEIEGSQVIKQEACSCNAGTSICIKNLFYNIPARRNFLKGNPVEMRHIIDEFQRVALANP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++ FT Y + + +RI ++G + V + E ++ I L+GY G P Sbjct: 185 QIFFTMHHDGQEVYHLPA----ASLKQRIIHLLGNQYNQRLVPVEEDTSIINLRGYVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F R + + F+N R ++D ++ + TA+ E +P YP+ VL ++IDP ++D+NVH Sbjct: 241 EFARKTRGEQFFFVNNRFIKDAYLNHAVMTAFEELLPEESYPLYVLFIDIDPSKIDINVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI------------------ 342 P K+ I++++ I I ++++++ + I+ + ++ Sbjct: 301 PTKTEIKYQDEKSIYAIIRSAVKRSLGRYNITPTIDFDQENSIEHLITAKPFEEIVAPSI 360 Query: 343 ---SSFHQDNAPKTHLPKYATSLTNTQEKLFLQEN-----RLSTNDLLPSDDPTYSEDND 394 F+ KT P A +K + +N ++S D Sbjct: 361 TFNPDFNPFAPEKTARPDPAFRNYGDYQKSAIPQNWDTLYQISQRDTAQQQQMDIDRQKV 420 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 + E E QIH +I+SQ G ++V+Q AAHER+++E+ Q + S Sbjct: 421 EINE-EQISKSSERQLFQIHNRFILSQIKSGFMLVNQQAAHERVLYERFLQQLENHSGVS 479 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q L P+ I + L+ E D+ LG FG N + + IPA L N LL Sbjct: 480 QQTLFPQSITFNAADFELLRELLPDVRALGFDVREFGKNTVVVEGIPAELHNANEHALLE 539 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 +++ ++ L D+ +N+ ++A ++++G ++ EMN L+ ++ + Sbjct: 540 HLLEGFKNNQAVLKL-DKRDNLARSLARNAALKAGTRLSLEEMNILIDQLFACQMPNISL 598 Query: 575 HGRPTFIKLKLSDIEKLFG 593 G+P I L+++ + F Sbjct: 599 SGKPIIITFTLTELLEKFE 617 >gi|288556898|ref|YP_003428833.1| DNA mismatch repair protein [Bacillus pseudofirmus OF4] gi|288548058|gb|ADC51941.1| DNA mismatch repair protein [Bacillus pseudofirmus OF4] Length = 658 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 186/659 (28%), Positives = 314/659 (47%), Gaps = 71/659 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I KL + N+IAAGE++ERP+ +KEL+EN+LDA S+ + + GG S +I DNG Sbjct: 3 QIVKLDAFLSNKIAAGEVVERPASIVKELLENALDAHSTNILIEMEEGGMSSIRILDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A RH TSKI D I T GFRGEALPSI +VSHLT+ + G Sbjct: 63 GIQADDVETAFYRHATSKIKTDRDLFQIRTLGFRGEALPSIASVSHLTMRTCT-GEGPGV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G I+S P GT V V++LF+ PARL +LK+ E ++DV+ R+A+A+ Sbjct: 122 ELTLEGGHITSRTPSKTRKGTEVIVQNLFYNTPARLKYLKTVHTEAGHVSDVVNRLALAH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ + K + N + + I+ + G + V ++ S + +++GY Sbjct: 182 PNVAISLYHNGKEMLK---TTGNKDVRQVIASIYGRNVAKEMVAVSGTSLDYSIEGYIAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + +FINGR +++ + ++ + +P+GRYPVVVL +E+DP +DVNV Sbjct: 239 PEVTRASRQYMSLFINGRYIRNFHLARAVQEGFHTLLPIGRYPVVVLSIEMDPTLIDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST---------------SSVLSKKMISS 344 HP+K +R + I SIQ A NK+ + ++ +K S Sbjct: 299 HPSKLEVRLSKEDELAKLITSSIQSAFNKQTLIPEIKHTTEKPKQIHYQETLPFEKATSD 358 Query: 345 FHQDNAPKTHLPKYATSLTNTQ------------------------------------EK 368 ++ L + S T+ E+ Sbjct: 359 TDSSLFDQSLLNQVNNSGAQTKGNHAKDPLPSIVKEAGTIEKDGNGSKFFDKAEGSKVEE 418 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN------------ 416 +++++ ++L + + E + ++H Sbjct: 419 DKFEKSKVKEDNLEKNQVDSLEMPETHKAEGDFASSVHEQQTNELHDRVPVMYPVGQMHG 478 Query: 417 -YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 YI++Q +G+ ++DQHAA ER+ +E R+ +Q LL P I+ E +I + Sbjct: 479 TYIVAQNENGMYLIDQHAAQERIKYEYYREKVGEVPRETQELLVPMTIECTNQEAIIIDQ 538 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 H +DL ++G+ E FG +R P L K + +R+IID ++ ++ ++ E+ Sbjct: 539 HLDDLKQVGVFLEEFGSKTYIVRSHPVWLPKGLEEETIREIIDHLLTTAKID-IKRLRED 597 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C SI++ R ++ EM LL + K+ + C HGRP I ++EK+F R Sbjct: 598 AAILMSCKASIKANRHLRQDEMFALLESLRKSSDPFTCPHGRPILIHFSSYELEKMFKR 656 >gi|295696239|ref|YP_003589477.1| DNA mismatch repair protein MutL [Bacillus tusciae DSM 2912] gi|295411841|gb|ADG06333.1| DNA mismatch repair protein MutL [Bacillus tusciae DSM 2912] Length = 661 Score = 488 bits (1256), Expect = e-135, Method: Composition-based stats. Identities = 181/658 (27%), Positives = 305/658 (46%), Gaps = 69/658 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + N+IAAGE++ERP+ +KELIENS+DA+++ + + G ++ D+G G Sbjct: 4 IHILDPGLSNRIAAGEVVERPASVVKELIENSIDAQATHIRVAVEEAGMKTIRVVDDGTG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M E+ +A++RH TSKI+ D I T GFRGEALPSI AVS L L +R +++ G + Sbjct: 64 MDREDAELALRRHATSKIASERDLFRIRTLGFRGEALPSIAAVSKLVLKTRRREDDAGTE 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G I S V M PGT + V +LFF PARL ++KS E + D + R A+A+P Sbjct: 124 IRAEGGTIVSTAEVGMAPGTDIFVEELFFNTPARLKYIKSLHTEGAHVVDAVTRAALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+FT S + +G ++ + G D + + E+ ++ + G G+P Sbjct: 184 EVAFTLSADGRP---VATTPGDGRLLHAVAALYGRDLAEKCIPVEERGLDLRVWGLAGLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +R F+NGR V++ + + YA +P+ R PVV L LE+DP VD NVH Sbjct: 241 EIHRAGRGHVMFFVNGRPVRNPALTRAVLDVYAGRLPIHRNPVVFLHLELDPGLVDPNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAI---------------------------------- 326 PAK +RF + + +++ + + Sbjct: 301 PAKLDVRFSEERDVAGAVERALGRVLDRARAIPGLHSPTEGPREGRNPPPQGPDAAAGDA 360 Query: 327 -NKKGISTSSVLSKKMISSFHQDNAP----KTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 K + + ++ +F D+ P P + +E ++ + Sbjct: 361 AQKTQRGSRAQTLRESQMAFRWDSPPGGGRSPASPLARQRTLEALAPITAEEQPEASGER 420 Query: 382 LPSDDPTYSEDNDPVEESEATHYQL-------------------------GIACAQIHQN 416 S + +SE T A AQ+ Sbjct: 421 GGETGSRSSLGPEVPVDSERTESNRTTEEAAAAVELEGVGTAVVRPRVPELRAVAQVLNL 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 YI+++ + L ++DQHAAHE++++E+ + ++ LL P ++L E + H Sbjct: 481 YIVAEAENSLFLIDQHAAHEKILYERFSRQITRREVGPMPLLVPITVELSVAEMHRLAPH 540 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 + + G+ AE FG NA+ +R +P I ++I L R+ + E ++ + R+E Sbjct: 541 LDMMQEYGLTAEPFGDNALVVRTVPDIWDGQDITALTREFLTECVERPMGQDPRKRLEQG 600 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + T AC G++++G+ + EM L ++ + N C HGRPT ++ D+++ F R Sbjct: 601 VITRACRGAVKAGQPLSMPEMQALCDQLRELDNPFSCPHGRPTILQWTRRDLDRQFQR 658 >gi|58039705|ref|YP_191669.1| DNA mismatch repair protein MutL [Gluconobacter oxydans 621H] gi|58002119|gb|AAW61013.1| DNA mismatch repair protein MutL [Gluconobacter oxydans 621H] Length = 619 Score = 488 bits (1256), Expect = e-135, Method: Composition-based stats. Identities = 221/612 (36%), Positives = 340/612 (55%), Gaps = 24/612 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR+LS +I+ IAAGE+IERP+ A+KEL+EN++DA ++R+ + GG +TDNG Sbjct: 11 TIRRLSGHVIDLIAAGEVIERPAAALKELVENAIDAGATRIVVALRAGGTDRIDVTDNGC 70 Query: 62 GMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GMT E+ +AV+RHCTSK+ D+ I T GFRGEALPSIGA + L++ SR P+++T Sbjct: 71 GMTPGELELAVERHCTSKLQDERLVQIRTLGFRGEALPSIGASARLSITSRTPESDTAWC 130 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G I+ +P + GT + V DLFF PAR FLKS +VE++ V+RR+A++ P Sbjct: 131 IRVDGGVITPPQPASGPVGTRIVVTDLFFATPARRKFLKSARVESSHAESVMRRLALSAP 190 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + + + QS + + + + L+E+ + L G+ P Sbjct: 191 HCAMRVLLDDKVLFDLPEQSPIARVASVL-----DTTPDTLIPLDEQRGAVRLSGFACGP 245 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + ++ +N R V D + + IR AY I GR+PV+ L L + ++DVNVH Sbjct: 246 ARTRATGSGQFILVNNRPVTDPMLRTAIRVAYRPVIERGRFPVMALHLTVPLERLDVNVH 305 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGI----------STSSVLSKKMISSFHQDNA 350 PAK+ +RF + IR+ +I + +A+ S S++ + A Sbjct: 306 PAKTELRFADEAEIRSLVIGGLGRALGHGSNGGGGIHASFGSRPSIVYPPRPPEPREAPA 365 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD-DPTYSEDNDPVEESEATHYQLGIA 409 T L L+ +D + E+ + LG A Sbjct: 366 SIPLQGSLPTGYAPRSSPLPGATPSLARPGFAETDPAFAPAARAPQQPEALDPAFPLGAA 425 Query: 410 CAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLE 467 AQ+ YI++ DG LV+VDQHAAHERL E++R+ + + + SQ LL PE++DL Sbjct: 426 IAQVFDTYILALAPDGDLVLVDQHAAHERLTHERLREQYANGGTLRSQALLLPEVVDLPR 485 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI-----ID 522 E +M EDL +LGI E FGP ++ +R +PA+L ++I LL+DI DE+ +D Sbjct: 486 REAEALMARAEDLSKLGIDLESFGPGSVLLRSVPALLGAQDIQGLLKDIADELASDPDLD 545 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 +++T + ++ ILA MAC+GSIR+GR+++ EM+ LLREME P ++ C+HGRPT++K Sbjct: 546 AASTGSFSHHLDAILARMACHGSIRAGRRLKPEEMDALLREMELTPRANTCSHGRPTWLK 605 Query: 583 LKLSDIEKLFGR 594 L ++E+LFGR Sbjct: 606 LTRRELERLFGR 617 >gi|330999347|ref|ZP_08323064.1| DNA mismatch repair protein [Parasutterella excrementihominis YIT 11859] gi|329575205|gb|EGG56756.1| DNA mismatch repair protein [Parasutterella excrementihominis YIT 11859] Length = 631 Score = 488 bits (1255), Expect = e-135, Method: Composition-based stats. Identities = 189/626 (30%), Positives = 332/626 (53%), Gaps = 43/626 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LS+++I+QIAAGE++ERP+ +KEL+EN++DA + VE I GGG ++DNG Sbjct: 14 KIQELSDQLISQIAAGEVVERPASVVKELVENAIDAGADSVEVRIEGGGIKRIVVSDNGC 73 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +AV+RH TSK+S D+ ++ + GFRGEAL SI +VS + ++SR + Sbjct: 74 GIPKDQLALAVKRHATSKVSNLDELESVSSLGFRGEALASIASVSDMKVISRVAGEDA-- 131 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + N GT +EV DLF+ PAR FLKSE E VI R+A+AY Sbjct: 132 ----FSIADGEISAASGNKGTRIEVADLFYKTPARRKFLKSEGTEAAHCQTVIERIALAY 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F F + + ER+++++ DF + L+ K+ + L G+ + Sbjct: 188 PEVAFLFVANGKPIINLPA----SSIEERLTRLMPRDFRDAHRALDIKAPALRLYGWVCL 243 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT R A+ Y ++NGR V+DK + +R AY + + P L L++DP +VDVNV Sbjct: 244 PTAARSRADCQYFYVNGRFVRDKVLSHGVRMAYQDVLHGSSQPSYCLFLQMDPHKVDVNV 303 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI--STSSVLSKKMISSFHQDNAPKTHLPK 357 HP KS +R R+ + FI +++ A+ + I +S + + S +D + + Sbjct: 304 HPTKSEVRMRDSQAVHQFIFHAVEDALARTTIVDPSSGEIMDTALPSSPRDASAQAPAEA 363 Query: 358 YATSLTNTQE--KLFLQENRLSTNDLLPSDDPTYSEDND--------------------- 394 N + +R +T L P + Sbjct: 364 PVAPTVNPSSFRPAQPKPSRTNTEAYLDFSSPHPKSFQNSFPTTIAAMKVDPATLSANHA 423 Query: 395 ---PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 P E+ LG A Q+ +II++ + G+V+VD HAAHER+++E++++ F+ K Sbjct: 424 TPKPAAEAPKRPQPLGRAVGQVCGTFIIAENSAGMVLVDMHAAHERILYERLKKSFDERK 483 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK---KN 508 + Q +L P + + + A + E+L +LG++ GPN +++R +P ++ + Sbjct: 484 MPMQEMLIPLVFTVTPEQMATFEDAREELEQLGLELSAVGPNQLSLRSVPQLMINQISQA 543 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 P ++R+++D+ + + ++ +L+ MAC+ ++R R + EM+ +LR+ME+ Sbjct: 544 GPTIVREVLDDFRQYGKSTAMTEKRNEVLSRMACHAAVRVNRILTIEEMDAILRQMEQTD 603 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +CNHGRPT+++L +++ F R Sbjct: 604 RADECNHGRPTWVQLSAKELDSFFMR 629 >gi|118581367|ref|YP_902617.1| DNA mismatch repair protein [Pelobacter propionicus DSM 2379] gi|166232100|sp|A1AT89|MUTL_PELPD RecName: Full=DNA mismatch repair protein mutL gi|118504077|gb|ABL00560.1| DNA mismatch repair protein MutL [Pelobacter propionicus DSM 2379] Length = 608 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 192/608 (31%), Positives = 314/608 (51%), Gaps = 19/608 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E I N+IAAGE++ERP+ IKELIENSLDA ++ + IA GG+ +ITDNG Sbjct: 4 RIAILPEIITNKIAAGEVVERPASVIKELIENSLDAGATDISVEIAAGGRRLIRITDNGH 63 Query: 62 GMTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E+ ++++RH TSKI D IHT GFRGEALPS+ +VS L L SR + G Sbjct: 64 GMSREDALLSLERHATSKIRSDNDLDGIHTLGFRGEALPSVASVSRLRLSSRETDSPEGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G K+ VR M PGT++ V +FF PARL FL+S + E + D + RMAI+ Sbjct: 124 EIIVEGGKVRDVRACGMAPGTVISVEQIFFNTPARLKFLRSAETEAGHVGDCLTRMAISR 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F+ S+ + ++ G+ R+SQ +G+ + EL+ + I + GY Sbjct: 184 PDVAFSCSSDGRDLLRVQ----RGDLLRRLSQALGKGTAASLHELHLSRDGIDISGYISS 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + + +INGR ++DK I I AY + GRYPVV L +++ P +VDVNV Sbjct: 240 PAACRSTTSAMFTYINGRFIRDKVIQHAIMQAYRGVMDRGRYPVVALFIQLPPAEVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK--KGISTSSVLSKKMISSFHQDNAPKTHL-- 355 HP K +RFR +++ + + ++++ + + + + + + A + + Sbjct: 300 HPTKHEVRFRRQSLVHDTLQSALEELLKRSPWLPRPQTPVQPAAVGAPSISQAYRERVAA 359 Query: 356 ---------PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 K + + + + + ++ Sbjct: 360 AAQASLAMARKPDPPRFHETARPQPDPRHTPGTESVSVREAPTPFLPREPAADPQGYFSA 419 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q H YI+ Q+ D LVI+DQHAA ER+ F+K+R F++ + SQ LL PE ++L Sbjct: 420 LRIIGQFHDEYILCQSGDQLVIIDQHAASERVAFQKLRHQFDTDGVESQRLLFPETLELS 479 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 E +L R+G + E FG N + + IP + ++ L+RD++ E+ + Sbjct: 480 FSEADTARRFGNELARIGFELEPFGGNTVIVSAIPRLAIARDASGLIRDLLAELTQLGAS 539 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 D + +L+ +AC+ +R +++ ++ LL M+ ++ C HGRP + L Sbjct: 540 SAFLDSRDALLSRIACHSVVRGVHRLEERQIRELLHGMDGTDFAASCPHGRPVSHVITLG 599 Query: 587 DIEKLFGR 594 ++E++F R Sbjct: 600 ELERIFKR 607 >gi|134299735|ref|YP_001113231.1| DNA mismatch repair protein [Desulfotomaculum reducens MI-1] gi|172044301|sp|A4J5Q3|MUTL_DESRM RecName: Full=DNA mismatch repair protein mutL gi|134052435|gb|ABO50406.1| DNA mismatch repair protein MutL [Desulfotomaculum reducens MI-1] Length = 640 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 185/642 (28%), Positives = 318/642 (49%), Gaps = 55/642 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L E N+IAAGE++ERP +KEL+ENSLDA ++R+ + GG + ++ DNG+G Sbjct: 4 ITILDEATANKIAAGEVVERPVSVVKELVENSLDAGANRISVELTQGGITGIKVVDNGYG 63 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M +E++ + RH TSKI ++D ++I T GFRGEALPSI AVS +TL +R G Sbjct: 64 MPAEDVQLCFLRHATSKIKRAEDLNSILTLGFRGEALPSIAAVSKVTLTTRTEDELAGTT 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I G + +V P GTI+E++DLFF PAR FLK+ ET+ ++D+I R+A+A P Sbjct: 124 MQIEGGYMQNVVPTGCPVGTIIEIKDLFFNTPARRKFLKTANAETSQVSDLITRLAMARP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F + + G+ + + + G D + + +E+ + +++ G P Sbjct: 184 DVRFELRSGNR---VLFSSPGTGSLKDTAAVIFGLDNVRSMLEIGYQGKLLSVAGLISKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + FINGR ++ F+ S ++ AY IP GR+P+ +L ++IDP QVDVNVH Sbjct: 241 VLTRASRHYQNFFINGRYIRSGFLSSILQQAYDTLIPAGRFPIAILHIDIDPTQVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST------------SSVLSKKMISSFHQD 348 P K IR I+ ++ ++ ++N T ++ + D Sbjct: 301 PTKMEIRMAREGEIQEELLAALSDSLNVPTAITGLWEIMPGRTKNTATDQRAENLEVKPD 360 Query: 349 NAPKTHLPKYA---------------TSLTNTQEKLFLQE-------------------- 373 + K PK + + QE+L Sbjct: 361 SKEKELQPKESQHPRLVACDLPSGKIMPPRHDQEQLHFSSRRIAPVRGKNSLLPDEGSSI 420 Query: 374 NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 NR ++ + E+ + + +E + + + Q+ Y+++ GL I+DQHA Sbjct: 421 NREEIPPVVDVKEQQLKENPNTYQPAETLGFPVLVPAGQVPPTYVLAHGEGGLYIIDQHA 480 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 AHER+++EK + +Q LL P +++ E LI++H D + LG E FG + Sbjct: 481 AHERVLYEKYLYLL-GNYVEAQMLLEPLTLEIPHHEAQLIIKHIVDFNELGFILEHFGGD 539 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI-ENILATMACYGSIRSGRKM 552 +R +P + ++ D++ + ++ + ++ + +++ A MAC +++SG+ Sbjct: 540 TFLLRGVPTN-AITEPKEVFLDLLARLQENPSQKVEKNLVLDHLAAAMACRDAVKSGQHF 598 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++E LL + + C HGRPT I++ +++K F R Sbjct: 599 SAVETKALLDGLARCQKPYTCPHGRPTLIQISQEELKKRFKR 640 >gi|222151138|ref|YP_002560292.1| DNA mismatch repair protein MutL [Macrococcus caseolyticus JCSC5402] gi|254766171|sp|B9EBI5|MUTL_MACCJ RecName: Full=DNA mismatch repair protein mutL gi|222120261|dbj|BAH17596.1| DNA mismatch repair protein MutL [Macrococcus caseolyticus JCSC5402] Length = 633 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 181/635 (28%), Positives = 299/635 (47%), Gaps = 50/635 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L I N+IAAGE+IERP +KEL+EN++DA+S+ + + G S ++TDNG G Sbjct: 4 IKTLDSTISNKIAAGEVIERPQSVVKELVENAIDAKSTSITIEVEEAGLSKIKVTDNGSG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +RH TSKI + D +I + GFRGEAL SI +VS + + + + G Q Sbjct: 64 ILEEDLELMFRRHATSKIENEHDLFHIRSLGFRGEALASIASVSKVRVTTCH-DGSIGRQ 122 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + + GT + V LF+ PARL ++KS E ITD+I R I++P Sbjct: 123 IDVIDGETVNRTLAQARQGTEITVESLFYNTPARLKYVKSLHTELGKITDIINRFVISFP 182 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + FT + + NG E ++ V G + VE+N ++ + + G+ P Sbjct: 183 YIKFTLVADGR---VLIASNGNGKMQEAMAVVYGMKIAQDLVEVNGRTGDYEVHGFIAKP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N + +FINGR +++ + I + Y +P+GRYP++ + + +DP VDVNVH Sbjct: 240 EHTRSNRHYMSLFINGRYIKNFMLTKAILSGYHTLLPVGRYPILAINIVMDPALVDVNVH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ---------DNAP 351 P K +R + + I + I++ I K+ + V KK++ +F Q ++ Sbjct: 300 PTKQEVRLSKESQLMELIERLIKEKIWKQNLIP-KVEKKKVLETFQQQKFEYDLLREHRD 358 Query: 352 KTHLPKYATSLTNTQ----------------EKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 KT Y+ Q +++ E+ T + ++ Sbjct: 359 KTKQSDYSEQTAVNQIDEKFKEQHKTAQLDKQRVPDGESTQKTTGFISDSAAELDTTSEI 418 Query: 396 VEES----------------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 + E E Q+H YII+Q DG+ ++DQHAA ER+ Sbjct: 419 LPEKNESSDVIENISTDTSREKRKIPYMEIVGQVHGTYIIAQNEDGMFMIDQHAAQERIK 478 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +E ++ + Q+LL P + L + E + + + L +GI E FG N I + Sbjct: 479 YEYFKKQIGDVGLEMQSLLIPITVTLSKDEAINLNKINILLKDIGIHLEHFGGNDYIIND 538 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 IP N + ++++ID + L E M+C SI++ ++ +MN Sbjct: 539 IPVWFPD-NYEETVQELIDYALQHRQID-LNKFREETAIMMSCKKSIKANHYLRITDMNY 596 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL E+ C HGRP I+ ++EKLF R Sbjct: 597 LLEELAHTVEPYTCPHGRPIIIQFTTYELEKLFKR 631 >gi|168218089|ref|ZP_02643714.1| DNA mismatch repair protein MutL [Clostridium perfringens NCTC 8239] gi|182379888|gb|EDT77367.1| DNA mismatch repair protein MutL [Clostridium perfringens NCTC 8239] Length = 674 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 183/674 (27%), Positives = 309/674 (45%), Gaps = 85/674 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L+ N+IAAGE++ERPS +KEL+ENSLDA + + I GG+S +I D+G Sbjct: 3 RINILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A H TSKI D D +I+T GFRGEALPSI +++ + S+ + G Sbjct: 63 GVHPEDVEKAFNPHATSKIKDTYDIFSINTLGFRGEALPSIASIARVDFKSKVSDFDMGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ISG + S+ +MN GT +EVRDLFF +PAR FLK+ E+ LI D++ R+++A Sbjct: 123 ELVISGGEKESLTDCSMNRGTQIEVRDLFFNVPARKKFLKTTARESALINDLVNRISLAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF K+ NG + I + G+ N + E + ++ G+ G Sbjct: 183 PDVSFKLFNNNK---KILNTYGNGKLIDVIRTIYGKSTAENLIYFEEHKDTASVYGFIGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 T R + N +F+N R V+++ + + A+ G++P VL ++ P +DVN+ Sbjct: 240 DTLARASRNNQSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNI 299 Query: 300 HPAKSYIRFRNP--------TIIRNFIIQSIQKAI------------------------- 326 HP KS I+F++ + + + ++ Sbjct: 300 HPTKSEIKFKDERFIFKVVFDAVHAAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDKE 359 Query: 327 ----------------------NKKGISTSSVLSKKMISSFHQDNAPKTHL---PKYATS 361 + S K + D K + K+ S Sbjct: 360 ISTLEKLKENINYKVSEDRKKEEIYSYNPSKDYEAKTEVNIPVDFLSKENQDESSKFNNS 419 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL--------------- 406 L N + K + +S + +L ++ + + E + Y+ Sbjct: 420 LENNEFKEVSAKREISYDPILIKNEIRDKVSENTYDSLERSDYKCNKNEYGNSLEETIYK 479 Query: 407 ------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 Q ++ YI+++ L ++DQHAAHE+++FEK D K+ Q L+ P Sbjct: 480 EAKFPKLKVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIP 539 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 ++ L + E+ E + G K FG N+I I E+P L K N +L+ +I+ + Sbjct: 540 LVVTLPIEDYLYYDENKEIFEKAGFKISDFGDNSIRIEEVPYFLDKLNPTELITSMINNL 599 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 T T++ + I A+M+C ++++ + +EM L+ ++ + C HGRPT Sbjct: 600 KKMGTGETVEVKYNKI-ASMSCRAAVKANDVLSILEMENLIEDLRYINDPFHCPHGRPTI 658 Query: 581 IKLKLSDIEKLFGR 594 IK +++K F R Sbjct: 659 IKFTSYELDKKFKR 672 >gi|332528775|ref|ZP_08404752.1| DNA mismatch repair protein MutL [Hylemonella gracilis ATCC 19624] gi|332041841|gb|EGI78190.1| DNA mismatch repair protein MutL [Hylemonella gracilis ATCC 19624] Length = 677 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 202/667 (30%), Positives = 341/667 (51%), Gaps = 77/667 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR+L +++I+QIAAGE++ERP+ ++EL++N+LDA ++++ + GG + D+G Sbjct: 12 PIRELPDELISQIAAGEVVERPASVVRELVDNALDAGANQITVRLLAGGVRLITVEDDGG 71 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ +A++RH TSKI+ + ++ T GFRGEAL +I +V+ LTL+SR T Sbjct: 72 GIPPGELAIALKRHATSKIASLQELESVATMGFRGEALAAINSVAELTLLSRSADQATAF 131 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + +I +P A PGT VEV++LFF+ PAR FLK++ E D +RR A+A Sbjct: 132 MLDGRTGEI---QPAARGPGTTVEVKELFFSTPARRKFLKTDATELAHCIDAVRRHALAR 188 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN--------------FPERISQVIGEDFINNAVELN 225 P+V F + +G F +R++ V+G DFI +V ++ Sbjct: 189 PEVGFAIWHEGKLVEQWRACGKDGTVTSDDADEAAGSRAFDQRLADVLGADFITASVAVD 248 Query: 226 EKSNE-----ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 + + I ++G G+P R A+Q + ++NGR V+DK + R+AY + + R Sbjct: 249 YRGRDASGRAIRVRGRAGVPDTARSRADQQFSYVNGRYVRDKVLTHAARSAYEDVLHGQR 308 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ----------------- 323 PV L +EIDP +VDVNVHP K +RFR+ + + +++ Sbjct: 309 QPVYALHIEIDPTRVDVNVHPTKIEVRFRDSREVHQAVRHALEDALAAPRAQAAVSGDIA 368 Query: 324 --KAINKKGISTSSVLSKKMISSFH------QDNAPKTHLPKYATSLTNTQE-------K 368 A +S + + F ++ AP+++ ++ + + Sbjct: 369 PAYAQLSATLSPPAPAWTQPAMRFDASDTEAREAAPRSYGAPWSGARADAPRGHPIQDLA 428 Query: 369 LFLQENRLSTNDLLPSDDPT------------------YSEDNDPVEESEATHYQLGIAC 410 Q + + T + + T D+ E S+ + + LG A Sbjct: 429 ALWQPSTVRTTPIGDAQAMTNDVYSTGGTIGADAQASAVMRDSSTQEGSDGSDWPLGKAL 488 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 AQ+ YI+++ GLVIVD HAAHER+++E+++Q + +TSQ LL P E Sbjct: 489 AQLQGVYILAENAQGLVIVDMHAAHERIVYERLKQQLDLHTLTSQPLLIPAPFAATPQEV 548 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS---TTY 527 A H + L+ LG++ P +A+R +P+ L++ + +L R ++ E+ + Sbjct: 549 ATAEAHADTLNSLGMEVSALSPKTLAVRAVPSTLAQGDPVELARGVLAELAELPHGEGAR 608 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 ++ IL TMAC+G++R+ R++ EMN LLR+ME+ S QCNHGRPT+ ++ L D Sbjct: 609 VIERARNEILGTMACHGAVRAHRQLTLAEMNALLRDMERTERSDQCNHGRPTWRQVTLKD 668 Query: 588 IEKLFGR 594 ++ LF R Sbjct: 669 LDALFLR 675 >gi|255657967|ref|ZP_05403376.1| DNA mismatch repair protein MutL [Mitsuokella multacida DSM 20544] gi|260850168|gb|EEX70175.1| DNA mismatch repair protein MutL [Mitsuokella multacida DSM 20544] Length = 655 Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 192/656 (29%), Positives = 308/656 (46%), Gaps = 68/656 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + IN+IAAGE++ERP+ IKELIEN++DA ++R+E I GG SF ++TDNG Sbjct: 1 MTIHVLDDNTINKIAAGEVVERPASVIKELIENAMDAGATRIEVEIMAGGTSFMRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM++E+ +A+ RH TSKI + D + I T GFRGEALP+I +VS TL++R ++ G Sbjct: 61 RGMSAEDAHLAILRHATSKIREVGDLNTIGTLGFRGEALPTIASVSRFTLLTRREGDDLG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ I+G + N GT V+V DLFF PAR FLK+ E I D I ++A++ Sbjct: 121 TRVTITGGREPDFIEAGCNIGTTVKVEDLFFNTPARKKFLKTNHTEGARINDFIVKLALS 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P + F F GN + I + G+ ++ + L + +I + GY Sbjct: 181 RPDIEFHFINNNKMSVV---TPGTGNLYDTIQAIYGDKTADSLLGLTLEDEDIKISGYIT 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P+ + + +N R +Q++ I I AY IP +P+ VL +E+ R +DVN Sbjct: 238 KPSMLKSSRAWQTYIVNSRIIQNRAIAKAIDNAYKSLIPKSGFPLAVLCIEVPQRTIDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAIN----------------KKGISTSSVLSKKMI 342 VHP KS ++F + + I + +++ AI ++ ++ + Sbjct: 298 VHPQKSELKFEDESRIFKAVYKAVLDAIRPAGRGLGEVAAVVEKPEQHVTMEPMQFVPAT 357 Query: 343 SSFHQDNAPKTH------------------------LPKYATSL---TNTQEKLFLQ--- 372 + P+ P A+SL ++TQE L + Sbjct: 358 EPLAEPIIPQWPQAAAASPIAAQSKPKTIYEAVHRTAPSAASSLAGFSDTQESLRREREA 417 Query: 373 --------------ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 E ++ P + + + + + Q+ YI Sbjct: 418 AVPLHDIHAAHPVLEGTVAETAAAPLSSAQETPCAEGEKGERLQYEGTVVPIGQVDLTYI 477 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 I+Q GL IVDQHAAHER++F+K + I SQ LL +I+ E L+ H E Sbjct: 478 IAQDAKGLYIVDQHAAHERILFDKF--SAMAGDIPSQQLLVHQILTFDRKESELVEAHQE 535 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 LG E G + E+PA + ++R+I+ ++D T T ++ + LA Sbjct: 536 LFASLGFHMEMSGEREFRLIEVPADVPVSEAEDIIREILTNLMDMHET-TAKEIRQACLA 594 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T AC +I++G ++ +M +L + C HGRPT +K ++ K+F R Sbjct: 595 TTACRAAIKAGEELSFRQMQIILDALAHTDFPYTCPHGRPTILKFSSEELAKMFKR 650 >gi|218283240|ref|ZP_03489301.1| hypothetical protein EUBIFOR_01889 [Eubacterium biforme DSM 3989] gi|218215995|gb|EEC89533.1| hypothetical protein EUBIFOR_01889 [Eubacterium biforme DSM 3989] Length = 608 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 186/611 (30%), Positives = 302/611 (49%), Gaps = 24/611 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI LSE + N IAAGE++ERP+ +KE +ENS+DA ++ +E GG ITD+G Sbjct: 3 KIHVLSEHLTNMIAAGEVVERPAGIVKECVENSIDAGATVIEVEAFQGGIERIVITDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ +A RH TSK+ ++ NI T GFRGEALPSI +V+ + L + G Sbjct: 63 GMDHEDAHLAFMRHATSKMHSEEELFNIQTMGFRGEALPSIASVAQVELQT--SNGEEGT 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + + GT ++V LF PAR LKS E ++I D++ +MA+++ Sbjct: 121 LLRYNYGSLDVDEKCNCPRGTKLDVSGLFIKTPARFKHLKSTSYEFSVIADLMNKMALSH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + F S ++ S NGN E + Q+ G++ NA+ + + + GY Sbjct: 181 PDIRFQLSHDGRVVFQ---TSGNGNIQEILYQMYGKEVAQNAIHFEGSNEDFHIHGYAIQ 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P NR ++ +N R ++ I I AY++ +P R+P+VVL ++ D + VDVNV Sbjct: 238 PKINRATKYFMFLTLNTRLIRSVAIQKAILDAYSDYMPPNRFPIVVLQMDSDTQLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + + I ++IQ A+N + S +K F Q ++ K Sbjct: 298 HPNKWEVRLSKQGEMLDLIKKTIQDALNASLKTVSVSKPEKKSVIFEQPEIQYSYPVKPR 357 Query: 360 TSLTNTQEKLF----------LQENRLSTNDLLPSDDPTYSEDNDPVEESE------ATH 403 T E+ F ++E R+ +P + P+ + E Sbjct: 358 LKEDKTIEQSFQNYKPIKETIVEEKRIYEEKKIPEIKIQEEPISYPLPKVEETNDKGPEF 417 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 ++ AQ+H +YI+ +GLVIVDQHAA ER +E++ + Q L+ P + Sbjct: 418 FKHLQVLAQLHDSYILCSNEEGLVIVDQHAAQERYHYEQLNEKLLVQCTNKQPLMVPIQL 477 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 D+ A M +E GI+ E FG + + +REIP + Q L+D++D +++ Sbjct: 478 DVSSNVLAQYMTINEKTAFFGIEFEPFGTDQLILREIPLWFHDVDQKQFLQDLLDYFVEN 537 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + ++++ATMAC+ SIR R + EM +++ +++K C HGRPT I + Sbjct: 538 QDVD-MAKLRKHMIATMACHSSIRFNRPLSMQEMEQVILDLQKCKQPYHCPHGRPTVIVM 596 Query: 584 KLSDIEKLFGR 594 ++ K F R Sbjct: 597 SDGELRKEFER 607 >gi|189347801|ref|YP_001944330.1| DNA mismatch repair protein MutL [Chlorobium limicola DSM 245] gi|238692206|sp|B3EHI9|MUTL_CHLL2 RecName: Full=DNA mismatch repair protein mutL gi|189341948|gb|ACD91351.1| DNA mismatch repair protein MutL [Chlorobium limicola DSM 245] Length = 629 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 176/631 (27%), Positives = 304/631 (48%), Gaps = 43/631 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + + N+I+AGE+++RP+ +KEL+EN++DA +SR+ +I GK +I DNG Sbjct: 3 KISRLPDTVANKISAGEVVQRPASVVKELLENAIDAGASRITVMIKDAGKELIRIIDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ + V+R TSKIS DD + + GFRGEAL SI +VSH L +R + Sbjct: 63 GMNREDALLCVERFATSKISVVDDLDTLMSLGFRGEALASISSVSHFELKTRQAFSPLAL 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G ++ V+ GT + VR+LF+ +PAR FLKS E I + +R +++AY Sbjct: 123 KFRYEGGALAEESEVSGEEGTSISVRNLFYNVPARRKFLKSNATEFRHIFESVRSLSLAY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + + + N + ER++ G DF + + E+++ +++ G+ G Sbjct: 183 ADIEWRMYNDDEELFHFR----NPDIRERLNYYYGSDFSEGLISITEENDYLSIHGFIGK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + + +IN R +Q++ + ++ AY E + + P +L L IDP +VDVNV Sbjct: 239 PGMLKRHKADQLFYINRRIIQNRMLSQALQQAYGELLEDRQAPFAMLFLGIDPSRVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------ 341 HPAK ++F + +RN +++A+ S + Sbjct: 299 HPAKLEVKFEDERSVRNMFYPVVKRAVQLHDFSPDASFVPDQGVQGESIQPEDEALNRRL 358 Query: 342 ---------------ISSFHQDNAPKTHLPKY-ATSLTNTQEKLFLQENRLSTNDLLPSD 385 + + Q + P++ ++ S R + P Sbjct: 359 MYHERPGRMATTAELYTDYRQHSLPQSSGKEHGPQSRQGEFFSAHEPLERWKKEGVEPEG 418 Query: 386 DPTYSED--NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 D ++ + ++ A Q+H YII Q +G++I+DQH AHER+++E+ Sbjct: 419 DEVFTTMLQSRFHDDESAAGGGTEPKIWQLHNKYIICQIKNGMMIIDQHVAHERVLYERA 478 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 N SQ LL P+ I++ + E + E +DL+RLG FG + I IP Sbjct: 479 LDVMNQNVPNSQQLLFPQKIEMRQWEYEVFEEIRDDLYRLGFNLRDFGSKTVMIEGIPQD 538 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 + +L+D+I ++++ L+ R +N+ + +C +I +G+K+ EM L+ Sbjct: 539 VRSGTEVTILQDMIAGYQENASKLKLEKR-DNLAKSYSCRNAIMAGQKLSLEEMRSLIDN 597 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP IKL L ++++FGR Sbjct: 598 LFATRVPYSCPHGRPVIIKLMLDQLDRMFGR 628 >gi|182626338|ref|ZP_02954093.1| DNA mismatch repair protein MutL [Clostridium perfringens D str. JGS1721] gi|177908357|gb|EDT70902.1| DNA mismatch repair protein MutL [Clostridium perfringens D str. JGS1721] Length = 674 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 183/674 (27%), Positives = 312/674 (46%), Gaps = 85/674 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L+ N+IAAGE++ERPS +KEL+ENSLDA + + I GG+S +I D+G Sbjct: 3 RINILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A H TSKI D D +I+T GFRGEALPSI +++ + S+ + G Sbjct: 63 GVHPEDVEKAFNPHATSKIKDTYDIFSINTLGFRGEALPSIASIARIDFKSKVSDFDMGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ISG + S+ +MN GT +EVRDLFF +PAR FLK+ E+ LI D++ R+++A Sbjct: 123 ELVISGGEKESLTDCSMNRGTQIEVRDLFFNVPARKKFLKTTARESALINDLVNRISLAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF K+ NG + I + G+ N + E + ++ G+ G Sbjct: 183 PDVSFKLFNNNK---KILNTYGNGKLIDVIRTIYGKSTAENLIYFEEHKDTASVYGFIGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 T R + N +F+N R V+++ + + A+ G++P VL ++ P +DVN+ Sbjct: 240 DTLARASRNNQSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNI 299 Query: 300 HPAKSYIRFRNP--------TIIRNFIIQSIQKAI------------------------- 326 HP KS I+F++ + + + + ++ Sbjct: 300 HPTKSEIKFKDERFIFKVVFDAVHSAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDKE 359 Query: 327 ----------------------NKKGISTSSVLSKKMISSFHQDNAPKTHL---PKYATS 361 + S K + D K + K+ S Sbjct: 360 ISTLEKLKENINYKVSDDRKKEEIYSYNPSKDYEAKTEVNIPVDFLSKENQDESSKFNNS 419 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL--------------- 406 L N + K + +S + +L ++ + + E++ Y+ Sbjct: 420 LENNEFKEVSAKREISYDPILIKNEIRDKVSENTYDSLESSDYKCNKNEYGNSLEETIYK 479 Query: 407 ------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 Q ++ YI+++ L ++DQHAAHE+++FEK D K+ Q L+ P Sbjct: 480 EAKFPKLKVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIP 539 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 +++L + E+ E + G K FG N+I I E+P L K N +L+ +I+ + Sbjct: 540 LVVNLPTEDYLYYDENKEIFEKAGFKISDFGDNSIRIEEVPYFLDKLNPTELITSMINNL 599 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 T T++ + I A+M+C ++++ + +EM L+ ++ + C HGRPT Sbjct: 600 KKMGTGETVEVKYNKI-ASMSCRAAVKANDVLSILEMENLIEDLRYINDPFHCPHGRPTI 658 Query: 581 IKLKLSDIEKLFGR 594 IK +++K F R Sbjct: 659 IKFTSYELDKKFKR 672 >gi|85859791|ref|YP_461993.1| DNA mismatch repair protein mutL [Syntrophus aciditrophicus SB] gi|123738831|sp|Q2LUR5|MUTL_SYNAS RecName: Full=DNA mismatch repair protein mutL gi|85722882|gb|ABC77825.1| DNA mismatch repair protein mutL [Syntrophus aciditrophicus SB] Length = 616 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 180/615 (29%), Positives = 311/615 (50%), Gaps = 25/615 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E + ++IAAGE++ERP+ +KEL+EN+LD+ ++ + + GG ++ DNG Sbjct: 4 RIVLLPETLTHRIAAGEVVERPASIVKELLENALDSGATDINVELERGGCGLIRVADNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ +A RH TSKI+ DD + +FGFRGEAL SI ++S L++R + G Sbjct: 64 GIFAQDVTLAFARHATSKIAEFDDLYRVRSFGFRGEALASIASISRTELVTRTADDLAGM 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G I GT + V +F ++P R FLK+E E DVI R+++A Sbjct: 124 RIVVEGGNICEKTEAGCPIGTSITVSRIFDSVPVRKKFLKAEATERAYCLDVITRLSLAN 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V + ++ ER++ V+G + + +++ + + G+ Sbjct: 184 PEVRIRVFSKGR---ELCHYPATSRLSERVALVLGNADADRLQPIEGETDRVRVTGFASR 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F Q Y F+N R V+D + + TAY I RYP VVL +++DP VDVNV Sbjct: 241 PDFTCATTRQIYTFVNRRHVRDHLLNHAVMTAYRRVIEPRRYPAVVLYVDLDPADVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +RFR P + +++++ + G S S+ + + P+ Sbjct: 301 HPAKLEVRFRQPRTVYEAVVEALSGMLRGMGQSALSLTRYGPAGTAEIGHIPQEDYESRI 360 Query: 360 TSL--------------------TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 + N K R+ ++ + S + S Sbjct: 361 SEALRRYSLASGSRKMMYGTGTEANPVNKKHFLAERIRGEEIHARESLLLSPAPALPQNS 420 Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 + + + +Y+I DG++++DQHAAHER++FEK+++ K Q LL Sbjct: 421 FHPVFADLVYLGSLWDSYLIFSVADGMLLIDQHAAHERILFEKIKKAAERNKTAVQVLLI 480 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 PEI++L + + L ++GI+AE FG I I+ +P +L+ + L++D+I E Sbjct: 481 PEILNLSRPDFERFGDVVPLLEQVGIEAEPFGGEEIIIKALPTLLAHLDPGVLVKDLIAE 540 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 D +LQ++ E I A +AC G++++G+K+ E+ +L R+++ P ++ C HGRP Sbjct: 541 CADRGGGLSLQEKGEKIYAYLACRGAVKAGQKLIREEVAQLCRDLDATPFAATCPHGRPV 600 Query: 580 FIKLKLSDIEKLFGR 594 ++ L DIE++F R Sbjct: 601 YVLYPLKDIERMFRR 615 >gi|222474963|ref|YP_002563378.1| DNA mismatch repair protein (mutL) [Anaplasma marginale str. Florida] gi|222419099|gb|ACM49122.1| DNA mismatch repair protein (mutL) [Anaplasma marginale str. Florida] Length = 632 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 213/628 (33%), Positives = 336/628 (53%), Gaps = 38/628 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L K +N+IAAGE+I+ P+ +KEL+ENS+DA ++ + +I GG++ + D+G Sbjct: 7 PIVVLDAKTVNKIAAGEVIDCPASVVKELVENSIDAGATTINVLIDKGGRNLISVIDDGC 66 Query: 62 GMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ +E+ A H TSK+ D D +NI + GFRGE L SI AV+ ++S+ Sbjct: 67 GIPRDEMERAFICHATSKLPDNDLNNIRSMGFRGEGLTSIAAVARTKMVSKYRGCTEAWS 126 Query: 121 IAISG-EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + G EK + P A+ GT +EVRDLFF P RL FL++E+ ET I D++ R A A Sbjct: 127 IVLEGGEKTRDLSPEALPCGTSIEVRDLFFATPTRLKFLRTEKAETQSIVDLMYRFATAR 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQV--IGEDFINNAVELNEKSNEITLQGYT 237 +F+ + +K + + R+ ++ G+ F ++E+ S+ I + GY Sbjct: 187 FSTAFSLTIADKQIFKYPAR---EDLMSRLWEMKPFGDAFREQSLEVRFHSDAINITGYI 243 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +PTFNR + Y F+NGR V + I++AY+E IP R+PVVV+ +EI P VDV Sbjct: 244 SVPTFNRSRPDMIYTFVNGRPVHSTLFMGAIKSAYSEFIPRDRHPVVVMCMEILPGDVDV 303 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS--TSSVLSKKMISSFHQDNAPKTHL 355 NVHP+K +RFRN + + +++++ A++ + F DN P Sbjct: 304 NVHPSKLEVRFRNRKQVYSVVVEALATALSSNVYRELPPRTPVGGGLDHFAVDNTPVLDT 363 Query: 356 PKYAT---------------------SLTNTQEKLFLQENRLS-------TNDLLPSDDP 387 P Y ++ E R + + + P Sbjct: 364 PHYGKVHDYGVAVGPKLSVQQTGGGGEFSSKPEHAIENPPRAAELFSFLGSGSSRRTTRP 423 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 S D++ LG A Q+ YI+S+ D ++IVDQHAAHERL +E M++ Sbjct: 424 VLSYDSEAHIVPLIEELPLGNAVCQLFDRYIVSRAGDHVIIVDQHAAHERLTYEYMKKVT 483 Query: 448 NSTKITSQTLLTPEIIDLLEGEC-ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 + Q LL PE+++L L+ E+ E L + G+ E G +A+RE+PAIL Sbjct: 484 ADEGMKRQVLLMPELVELDNEYELELLGEYKEKLLKFGLVIEPMGSMVVAVREVPAILGV 543 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 ++ ++ I++ I++ ++++I+++ T+ACY SIRSGR ++ EMN LLR+ME Sbjct: 544 FDVKAMIAKIVESIVEVGDALFMREKIKHVCGTIACYSSIRSGRTLKLEEMNSLLRQMED 603 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 P+S QCNHGRPT++KL LS+I++LF R Sbjct: 604 TPHSGQCNHGRPTYVKLSLSEIDRLFER 631 >gi|18310138|ref|NP_562072.1| DNA mismatch repair protein [Clostridium perfringens str. 13] gi|20455087|sp|Q8XL86|MUTL_CLOPE RecName: Full=DNA mismatch repair protein mutL gi|18144817|dbj|BAB80862.1| DNA mismatch repair protein [Clostridium perfringens str. 13] Length = 674 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 183/674 (27%), Positives = 308/674 (45%), Gaps = 85/674 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L+ N+IAAGE++ERPS +KEL+ENSLDA + + I GG+S +I D+G Sbjct: 3 RINILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A H TSKI D D +I+T GFRGEALPSI +++ + S+ + G Sbjct: 63 GVHPEDVEKAFNPHATSKIKDTYDIFSINTLGFRGEALPSIASIARVDFKSKTEDFDMGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ISG + S+ +MN GT +EVRDLFF +PAR FLK+ E+ LI D++ R+++A Sbjct: 123 ELIISGGEKESLTDCSMNRGTQIEVRDLFFNVPARKKFLKTTARESALINDLVNRISLAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF K+ NG + I + G+ N + E + ++ G+ G Sbjct: 183 PDVSFKLFNNNK---KILNTYGNGKLIDVIRTIYGKSTAENLIYFEEHKDTASVYGFIGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 T R + N +F+N R V+++ + + A+ G++P VL ++ P +DVN+ Sbjct: 240 DTLARASRNNQSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNI 299 Query: 300 HPAKSYIRFRNP--------TIIRNFIIQSIQKAI------------------------- 326 HP KS I+F++ + + + + ++ Sbjct: 300 HPTKSEIKFKDERFIFKVVFDAVHSAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDKE 359 Query: 327 ----------------------NKKGISTSSVLSKKMISSFHQDNAPKTHLPKY---ATS 361 + S K + D K + + S Sbjct: 360 ISTLEKLKENINYKVSEDKKKEEIYSYNPSKDYEAKTEVNIPVDFLSKENQDESFSINNS 419 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL--------------- 406 L N + K + +S + +L ++ E E + Y+ Sbjct: 420 LENNEFKEVSAKREISYDPILIKNELKDKVSESTSESLERSDYKCNKNEYGNSIEEIIYR 479 Query: 407 ------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 Q ++ YI+++ L ++DQHAAHE+++FEK D K+ Q L+ P Sbjct: 480 EAKFPKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQPLMIP 539 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 ++ L + E+ E + G K FG N+I I E+P L K N +L+ +I+ + Sbjct: 540 LVVTLPTEDYLYYDENKEIFEKAGFKISDFGDNSIRIEEVPYFLDKLNPTELITSMINNL 599 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 T T++ + I A+M+C ++++ + +EM L+ ++ + C HGRPT Sbjct: 600 KKMGTGETVEVKYNKI-ASMSCRAAVKANDVLSILEMENLIEDLRYINDPFHCPHGRPTI 658 Query: 581 IKLKLSDIEKLFGR 594 IK +++K F R Sbjct: 659 IKFTSYELDKKFKR 672 >gi|15604708|ref|NP_221226.1| DNA mismatch repair protein [Rickettsia prowazekii str. Madrid E] gi|6225738|sp|Q9ZC88|MUTL_RICPR RecName: Full=DNA mismatch repair protein mutL gi|3861403|emb|CAA15302.1| DNA MISMATCH REPAIR PROTEIN MUTL (mutL) [Rickettsia prowazekii] Length = 595 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 228/597 (38%), Positives = 363/597 (60%), Gaps = 7/597 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE IN+IAAGE+IERP+ +KEL+EN++D S++++ ++ GK+ ++D+G Sbjct: 1 MTIKFLSESTINRIAAGEVIERPASVVKELVENAIDGGSTKIDIILERAGKNLIIVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK+++ DF NIHTFGFRGEAL SI A+S + + S+ + + Sbjct: 61 IGMTDKELEIAVKRHTTSKLNESDFFNIHTFGFRGEALASIAAISKMLITSKKREADKAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G + N GT +EVRDLFF PARL FL+S++ E D+++++A+A+ Sbjct: 121 QIKLIGGNKQQITVSVHNEGTKIEVRDLFFATPARLKFLRSDKTELAASIDIVKKIALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P++SF N K+ Q+ + N +RI VIG+ FI NA ++ K+ + ++ GYT Sbjct: 181 PRISFNLIHDNKNLLKLKGQNKDSETNLKQRIIDVIGDVFIKNAAYIDFKTPDFSICGYT 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 IPT+N+ ++ ++FIN R ++DK + +R AY + + RY + V+ L+IDP+ VDV Sbjct: 241 SIPTYNKASSEDQFLFINNRPIKDKLLQVALRVAYQDYLARDRYALCVIFLQIDPQLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK+ +RF +P +RN +I++I+ A+ K T++ + S +++ P H Sbjct: 301 NVHPAKAEVRFHDPNYVRNILIEAIKNALTNKSQITATTIGSDKNSLVNKE--PTIHKAT 358 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 S + + N + + + Y+ G+A AQ+H Y Sbjct: 359 NVNSKASEYTSFNFKRNTAYHTLPYGKIEQEVGKCIEH-NNQSHKQYKFGVAKAQLHTTY 417 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI-MEH 476 IISQT D +VI+DQHAA+ERL + K++ + ++ Q LL PEI++L + A E+ Sbjct: 418 IISQTEDSIVIIDQHAAYERLGYAKIKYCLKNGELVKQRLLIPEIVELSSQKKADCLYEN 477 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L +L + E+FG +I + EIP IL N+ +L++D+ D + D + L++ IE++ Sbjct: 478 REKLFKLSLTIEKFGEKSIIVTEIPNILGDVNVQKLIQDLADHLSDFAKNMPLKELIEHV 537 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + C+ SIR+ RK+ + EMN LLR+ME S+QCN+ RPT+I+LKL DIE LF Sbjct: 538 IKIYICHYSIRAARKLSADEMNSLLRQMENMSFSAQCNNNRPTYIELKLKDIELLFR 594 >gi|189499282|ref|YP_001958752.1| DNA mismatch repair protein MutL [Chlorobium phaeobacteroides BS1] gi|238692253|sp|B3EL44|MUTL_CHLPB RecName: Full=DNA mismatch repair protein mutL gi|189494723|gb|ACE03271.1| DNA mismatch repair protein MutL [Chlorobium phaeobacteroides BS1] Length = 624 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 179/627 (28%), Positives = 308/627 (49%), Gaps = 40/627 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L + + N+I+AGE+++RP+ +KEL+EN++DA ++R+ I GK Q+ DNG Sbjct: 3 RIARLPDIVANKISAGEVVQRPASVVKELLENAIDAGATRITVAIKDAGKELVQVIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ V+R TSKISD + + T GFRGEAL SI VSH L +R +N G Sbjct: 63 GMDEEDALRCVERFATSKISDAEELDALTTLGFRGEALASISTVSHFELRTRRENDNVGI 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ G +S A PGT V VR+LF+ +PAR FLKS E I + ++ +AY Sbjct: 123 QLRYEGGVLSERGKAASEPGTAVSVRNLFYNVPARRKFLKSNATEFKHIFESVKAQVLAY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + + + ER++ G+DF + +E+++ ++ ++L GY G Sbjct: 183 PEIQWQMINDDETLFDFRS----SDMHERLNFFFGDDFAGSLIEVHDDNDFLSLHGYVGK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ + N+ ++++N R +Q++ + ++ AY E + P V+L L IDP+Q DVNV Sbjct: 239 PSMQKRQKNEQFIYLNRRVIQNRMLSQALQQAYGELLVERHSPFVLLFLGIDPQQTDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS--------------------------- 332 HPAK ++F + +R I++++ + S Sbjct: 299 HPAKLEVKFEDERSVRTMFYTIIKRSVRMQDFSPDVGGEGFHETSDSFSSRSSQHSDARL 358 Query: 333 -----TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 S S + Q++ PK +P T ++ +E + D Sbjct: 359 GFQAVPSRASSTDDLYREFQESTPKRPMPDR-TRVSEQEEMFSHSADIFCEPDREFRSSD 417 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 + V+ + Q+H YII Q GL+++DQH AHER+++E+ Sbjct: 418 FGQVSEEFVDGVRLEPEEKDPKIWQLHNKYIICQIKTGLMLIDQHVAHERVLYERAVDIM 477 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 ++ +Q LL P+ ++L E + +E +DL RLG G + I +P + Sbjct: 478 DNNVPNAQQLLFPQKVELKPWEFEIYLEICDDLDRLGFNLGTLGTRTVMIEGVPQDVRSG 537 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 + +L+D+I E +++ L+ R EN+ + +C +I SG+ + +M L+ + Sbjct: 538 SEAYILQDMIQEYQQNASKLKLEKR-ENLAKSYSCRNAIMSGQALSLEDMRSLIDRLFAT 596 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP I++ L ++++FGR Sbjct: 597 KMPYVCPHGRPVIIRISLDQLDRMFGR 623 >gi|224542101|ref|ZP_03682640.1| hypothetical protein CATMIT_01276 [Catenibacterium mitsuokai DSM 15897] gi|224525034|gb|EEF94139.1| hypothetical protein CATMIT_01276 [Catenibacterium mitsuokai DSM 15897] Length = 592 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 183/594 (30%), Positives = 300/594 (50%), Gaps = 10/594 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+LSE + N+IAAGE++ERP+ IKEL ENS+DA++ R+ ++ GG S + D+G G Sbjct: 4 IRQLSENLANKIAAGEVVERPASVIKELTENSIDAKAKRITILVEQGGTSSMSVIDDGIG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M + + RH TSKI D D NI T GFRGEA+PSI ++S TL + + Sbjct: 64 MNRTDALLCFSRHATSKIVDENDLFNITTLGFRGEAIPSIASISVFTLET--SDGEENTK 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + K SV VAMN GT + V +F +PARL ++KS E I + R+A+A+P Sbjct: 122 VEYEFGKRKSVDSVAMNRGTKITVERIFQNVPARLKYMKSINAEFAAIYSYVERLALAHP 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SFT +K N N E IS++ G N + ++ + E + GY Sbjct: 182 EISFTLVHDHKTIFKTN---GRNNLLEVISEIYGLPVAKNMIHVDFGNEEFHVSGYISKI 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +R + N +N R V++ ++TI Y + R+P+ +L +++DP VDVNVH Sbjct: 239 DTSRSSKNHIVTLVNHRYVKNMKTINTINEVYRRYLADKRFPIAILEIDVDPYLVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +RF T ++ +++ +++A++KK ++ + +SF A T Sbjct: 299 PAKLEVRFSKETELKELLLKGLEEALSKKNLTYKPSTRETEKASFKPSLAQMTI--PLDE 356 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 +E+ L+ D+ + P EE + Q YI+ Sbjct: 357 VFEEVKEEPVLETVETVHEDIPVYEPEKVEVKAQPKEEPLKPIKEKIKVIGQTRGTYILG 416 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 + G I+DQHAA ER+ +E F+ ++ Q ++ P + E EC +I EH E L Sbjct: 417 ENERGFYIIDQHAAQERINYEYFLNKFSHPDLSIQPMIVPLTFEYPESECLVIDEHKELL 476 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 +GI E FG ++ +R +P + + + ++I E++++ + + E+ +AT+ Sbjct: 477 EEVGIHLESFGRHSYIVRGLPLWMKNIDEKIFIDEMIQEVLNN-QSVDIVAMQEHAIATL 535 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC S++ + + +M ++ + + N C HGRPT I +IEKLF R Sbjct: 536 ACKASVKGNTYLTTQDMQTIVDNLMRCDNPYVCPHGRPTIIFYSDYEIEKLFKR 589 >gi|147677677|ref|YP_001211892.1| DNA mismatch repair protein [Pelotomaculum thermopropionicum SI] gi|189030403|sp|A5D2K5|MUTL_PELTS RecName: Full=DNA mismatch repair protein mutL gi|146273774|dbj|BAF59523.1| DNA mismatch repair enzyme [Pelotomaculum thermopropionicum SI] Length = 605 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 187/607 (30%), Positives = 291/607 (47%), Gaps = 20/607 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L E QIAAGE++ERP +KEL+ENS+DA + R+ + GGG + D+G G Sbjct: 4 IIILDEFTAGQIAAGEVVERPVSVVKELVENSIDAGAGRIVVELEGGGLQAISVLDDGCG 63 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ E++ +A QRH TSKI SDD + I T GFRGEALPSI AVS +T+ +R G + Sbjct: 64 MSEEDLVLAFQRHATSKIKCSDDLNRITTLGFRGEALPSIAAVSKITVATRTRDALAGTR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 +G ++ P+ PGT + VRDLF+ PAR +K+ E L +I R+A+A P Sbjct: 124 AEFAGGELIGKGPIGCPPGTSITVRDLFYNTPARRKAMKAPSAEGALCGGLISRLALARP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++ F ++ + +GN + ++ V G + + + +++ GY G P Sbjct: 184 EICFEVGIKGR---RVFYSPGSGNLIDSLAAVYGRQIAAEMIAVKAVAEGLSINGYLGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + +R + V INGR V+ I I AY + GR PV VL L + P +DVN+H Sbjct: 241 SLSRSTRSHITVIINGRYVRCPAIAEAIEGAYGTLLSRGRRPVAVLSLSVSPELLDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK--- 357 PAK +R + + ++ A+ K + S+ ++ + Sbjct: 301 PAKLEVRLLEEEKTASLLAGILKDALADKAVIPSAGNFRQAALRLENNKPGAEIFDGLGA 360 Query: 358 --YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ--------LG 407 T + ++ + + L D Y D V E+E T + Sbjct: 361 GIIKTPGGGSSDRHVPGDKKNIQECLTLPDAHEYVADRVWVREAEDTPAYGNKVEKLPVL 420 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 A A YI++ DGL IVDQHAAHER+I+E++ SQ LL P +++L Sbjct: 421 NALAHFPPVYILAGGEDGLYIVDQHAAHERIIYEEILSS--GRTRPSQYLLVPVMLELDY 478 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 E ++++E G E FG N +R +P L +++ D++D T Sbjct: 479 REASILIERIIWFTDAGFVIEHFGGNTFLLRGVPFELPAGQEREIILDLLDYFESKGTGA 538 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 + D + A++AC ++R+G K+ MN LL+ + + C HGRP IKL + Sbjct: 539 GMTDFFKWAAASIACRSAVRAGEKLSLPSMNALLQRLSGTASPYTCPHGRPVVIKLSFRE 598 Query: 588 IEKLFGR 594 +E F R Sbjct: 599 LELRFRR 605 >gi|303256707|ref|ZP_07342721.1| DNA mismatch repair protein MutL [Burkholderiales bacterium 1_1_47] gi|302860198|gb|EFL83275.1| DNA mismatch repair protein MutL [Burkholderiales bacterium 1_1_47] Length = 631 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 189/626 (30%), Positives = 331/626 (52%), Gaps = 43/626 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LS+++I+QIAAGE++ERP+ +KEL+EN++DA + VE I GGG ++DNG Sbjct: 14 KIQELSDQLISQIAAGEVVERPASVVKELVENAIDAGADSVEVRIEGGGIKRIVVSDNGC 73 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +AV+RH TSK+S D+ ++ + GFRGEAL SI +VS + ++SR + Sbjct: 74 GIPKDQLALAVKRHATSKVSNLDELESVSSLGFRGEALASIASVSDMKVISRVAGEDA-- 131 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + N GT +EV DLF+ PAR FLKSE E VI R+A+AY Sbjct: 132 ----FSIADGEISAASGNKGTRIEVADLFYKTPARRKFLKSEGTEAAHCQTVIERIALAY 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F F + + ER+++++ DF + L+ K+ + L G+ + Sbjct: 188 PEVAFLFVANGKPIINLPA----SSIEERLTRLMPRDFRDAHRALDIKAPALRLYGWVCL 243 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT R A+ Y ++NGR V+DK + +R AY + + P L L++DP +VDVNV Sbjct: 244 PTAARSRADCQYFYVNGRFVRDKVLSHGVRMAYQDVLHGSSQPSYCLFLQMDPHKVDVNV 303 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI--STSSVLSKKMISSFHQDNAPKTHLPK 357 HP KS +R R+ + FI +++ A+ + I +S + + S +D + + Sbjct: 304 HPTKSEVRMRDSQAVHQFIFHAVEDALARTTIVDPSSGEIMDTALPSSPRDASAQAPAEA 363 Query: 358 YATSLTNTQE--KLFLQENRLSTNDLLPSDDPTYSEDND--------------------- 394 N + +R +T L P + Sbjct: 364 PVAPTVNPSSFRPAQPKPSRTNTEAYLDFSSPHPKSFQNSFPTTIAAMKVDPATLSANHA 423 Query: 395 ---PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 P E+ LG A Q+ +II++ + G+V+VD HAAHER+++E +++ F+ K Sbjct: 424 TPKPAAEAPKRPQPLGRAVGQVCGTFIIAENSAGMVLVDMHAAHERILYEHLKKSFDERK 483 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK---KN 508 + Q +L P + + + A + E+L +LG++ GPN +++R +P ++ + Sbjct: 484 MPMQEMLIPLVFTVTPEQMATFEDAREELEQLGLELSAVGPNQLSLRSVPQLMINQISQA 543 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 P ++R+++D+ + + ++ +L+ MAC+ ++R R + EM+ +LR+ME+ Sbjct: 544 GPTIVREVLDDFRQYGKSTAMTEKRNEVLSRMACHAAVRVNRILTIEEMDAILRQMEQTD 603 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +CNHGRPT+++L +++ F R Sbjct: 604 RADECNHGRPTWVQLSAKELDSFFMR 629 >gi|149280309|ref|ZP_01886431.1| DNA mismatch repair protein [Pedobacter sp. BAL39] gi|149228998|gb|EDM34395.1| DNA mismatch repair protein [Pedobacter sp. BAL39] Length = 615 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 177/614 (28%), Positives = 313/614 (50%), Gaps = 29/614 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ A+KEL+EN++DA +++++ ++ GK+ Q+ DNG G Sbjct: 5 IQLLPDSVANQIAAGEVVQRPASAVKELLENAIDAGATKIQLILKDAGKALIQVIDNGCG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + M +RH TSK+ +D I T GFRGEA+ SI A++ + L +R ++ G Sbjct: 65 MSITDARMCFERHATSKVRKAEDLFAIRTMGFRGEAMASIAAIAQVELKTRRHEDELGTL 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G ++ S PVA + GT + +++LFF PAR NFLKS E + D +R+++AYP Sbjct: 125 IHIEGSEVVSQEPVAASEGTSICIKNLFFNTPARRNFLKSNPAEMRHVIDEFQRVSLAYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F+ Y++ +R+ + G ++ + + E+++ I L+G+ G P Sbjct: 185 AIAFSLHHDGVEIYRLPS----SVLKQRVVHLFGNNYNQRLIPVEEETSIINLKGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + F+N R ++D ++ + AY + +P +P+ VL ++IDP ++DVNVH Sbjct: 241 EFAKKTRGEQFFFVNNRFIKDNYLNHAVNRAYEDLLPDDHFPLYVLFIDIDPAKIDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM-ISSFHQDNAPKTHLPKY- 358 P K+ I++ + I + ++++++ + IS + ++ S AP+ +P Sbjct: 301 PTKTEIKYLDEKSIYAILHSAVKRSLGRFNISPTIDFDQETGFSGMITPKAPEEIVPPSI 360 Query: 359 -------ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG---- 407 S Q++ N + + E + E + + G Sbjct: 361 SFNPDFNPFSEDKPQKETHFSRNYSGGISPSTKNWGSLYEIANHAPEEQTSMELPGLPAD 420 Query: 408 -------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 Q+H YIISQ GL+++DQ AAHER+++E+ K SQ L P Sbjct: 421 DSLVPVQKQLMQLHNKYIISQIKSGLMVIDQQAAHERILYERFSLHLEDRKGASQQSLFP 480 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI--PQLLRDIID 518 + + L + L +D+ LG + FG N + I IP L NI QL +I+ Sbjct: 481 QTVTLSHNDYELAKSLLDDIKSLGFEVREFGKNTLVIEGIPVDLGSNNINETQLFEHLIE 540 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 +S L D+ + + +MA SI+SG + EMN L+ E+ + + G+P Sbjct: 541 GFKNSQQELKL-DKRDALARSMARNSSIKSGAVLGQQEMNTLIEELFACKSPNFSISGKP 599 Query: 579 TFIKLKLSDIEKLF 592 + L++++K F Sbjct: 600 VIQTIGLTELDKKF 613 >gi|294339880|emb|CAZ88243.1| putative DNA mismatch repair protein mutL [Thiomonas sp. 3As] Length = 613 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 192/607 (31%), Positives = 336/607 (55%), Gaps = 16/607 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L + +I+QIAAGE+IERP+ A++EL++N++D+ +S + + GG Q+ D+G Sbjct: 7 PIRPLPDVLISQIAAGEVIERPASALRELLDNAIDSGASALTVRLEQGGLGSVQVEDDGC 66 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +EE+P+A+ RH TSKI+D + + GFRGEAL ++ AV+ + ++SR + GA Sbjct: 67 GIPAEELPLALLRHATSKIADLDELHHAAHLGFRGEALAAMAAVAEIEIISRRAGAD-GA 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I S ++++V+P A GT V +R LFF +PAR FLKS Q E DV +R AIA+ Sbjct: 126 RIHASAGQVAAVQPTAAQQGTRVTLRQLFFNLPARRKFLKSPQTEYAWCADVFKRTAIAH 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++ + + + +R++ V+GE F +A+ ++ + + ++G Sbjct: 186 PQIALRLWHDGQLKLQFERDPSPHGL-DRLAAVLGEAFSAHALPVSAQIGPLAVRGLICK 244 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT R A+ ++ +N R V+D+ + +R AYA+ + P LLL++ VDVNV Sbjct: 245 PTAARARADVQHIIVNNRWVRDRTVAHGVRAAYADVLHGALQPQYALLLDLPSELVDVNV 304 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL---- 355 HPAKS +RFR+ + + + ++++ + + G SS +++ Q + Sbjct: 305 HPAKSEVRFRDSSAVHQAVRHAVEQVLARAGGEASSSHPSAPPAAWEQPPSALPTTAALA 364 Query: 356 -----PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND--PVEESEATHYQLGI 408 P + + + + L D + ++ + LG Sbjct: 365 FGVARPSPSPIPWDALSRAYAPLATADAAPLQAQDSAAPRPYAQATDLAAAQPDDFPLGF 424 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-KITSQTLLTPEIIDLLE 467 A AQ+ YI++Q GLVIVD HAAHER+++E+++ + + Q LL P + Sbjct: 425 ALAQLLGIYILAQNRHGLVIVDMHAAHERIVYERLKAAEQADAPVAVQPLLIPAAFAASD 484 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 E +H + L LG++ +R GP+++ +R P +L+ + +L R ++ ++I T+ Sbjct: 485 AEMGAAEDHADALRSLGVELDRAGPSSLVVRATPTLLAHADPIRLARGLLADLISQGTSS 544 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 LQ+R +L++MAC+G++R+ R++ EMN LLR+ME+ + QCNHGRPT+ ++ L+D Sbjct: 545 RLQERRNALLSSMACHGAVRANRQLTLAEMNGLLRDMERTERADQCNHGRPTWRQIGLAD 604 Query: 588 IEKLFGR 594 ++ LF R Sbjct: 605 LDALFLR 611 >gi|303232202|ref|ZP_07318905.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella atypica ACS-049-V-Sch6] gi|302513308|gb|EFL55347.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella atypica ACS-049-V-Sch6] Length = 652 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 188/655 (28%), Positives = 304/655 (46%), Gaps = 68/655 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L E IN+IAAGE++ERP+ +KELIENS+DA ++ +E I GG ++ +ITDNG Sbjct: 3 TIHVLDETTINKIAAGEVVERPASVVKELIENSIDAGATSIEVEIGEGGSAYMRITDNGK 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ +AV RH TSKI +D +I + GFRGEAL SI +VSH L +R G Sbjct: 63 GMTEEDARLAVLRHATSKIQNVEDLFDIASLGFRGEALASIASVSHFVLTTRTVDQELGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G + P PGT +EV++LFF PAR FLK+E+ E++ I D++ ++A++ Sbjct: 123 RILIDGGTFTDCIPYGAAPGTTIEVKELFFNTPARRKFLKTERTESSKIQDIVGKLALSN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + + + + ++ + G N+ + +S I ++G Sbjct: 183 PHIAFKLTIDDR---VAIITPGSSSIQDTVAALYGYKTKNDIFPIAYESEHIYIEGVVSK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT + + +N R + DK IL I AY +P YP+V+L + + VD+NV Sbjct: 240 PTLLKSTRIWQTIIVNNRVISDKTILKAIDNAYHALLPKSGYPLVLLHITVPASMVDINV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN----KKGISTSSVLSKKMISSFHQDNAPKTHL 355 HP KS ++F + II + +I A+N ++ SS ++ + + Sbjct: 300 HPRKSEVKFEDDKIIFKAVYHAILNALNNPLHERYERESSSFTQPLETESQGSGYNSYQA 359 Query: 356 PKYATSLTNT------------------------------------QEKLFLQENRLSTN 379 P+ + +T +EK F +T Sbjct: 360 PQVLSDHNDTAEHIATAIDYDKVFGGRRTKGYEVLRQDTRDFVDALKEKGFTPPAPKATY 419 Query: 380 DLLPSDDPTYSE-----DNDPVEESEATHYQLGIAC---------------AQIHQNYII 419 + ++ +++ + E+ E H Q+ YI+ Sbjct: 420 EQETFEESSFTSVPTAYTSYTAEDKEKFHQIQEQHIEDESRDIQKSGFLPMGQVASCYIL 479 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ D L I+DQHAAHER+ ++++ +S I Q+LL P + E E L+ + Sbjct: 480 AKKGDDLYIIDQHAAHERVRYDRL--CKSSEAIPMQSLLVPTYSNATEDEMNLVENEQDA 537 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L LG + E GPN I + P L + ++L + + D Q +LA Sbjct: 538 LLDLGFEVELGGPNQIKLVGAPVDLVESKAQEILSYVFTFLHDHEQPTKAQ-LRHEMLAY 596 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C G+I+SG + +M L+ ++ C HGRPT IK ++ KLF R Sbjct: 597 ASCRGAIKSGHNLNMYQMTTLIEDLFHTDKPYVCPHGRPTIIKFTPDELGKLFLR 651 >gi|303228550|ref|ZP_07315378.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella atypica ACS-134-V-Col7a] gi|302516797|gb|EFL58711.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella atypica ACS-134-V-Col7a] Length = 652 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 189/655 (28%), Positives = 303/655 (46%), Gaps = 68/655 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L E IN+IAAGE++ERP+ +KELIENS+DA ++ +E I GG ++ +ITDNG Sbjct: 3 TIHVLDETTINKIAAGEVVERPASVVKELIENSIDAGATSIEVEIGEGGSAYMRITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ +AV RH TSKI +D +I + GFRGEAL SI +VSH L +R G Sbjct: 63 GMTEEDARLAVLRHATSKIQNVEDLFDIASLGFRGEALASIASVSHFVLTTRTVDQELGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G + P PGT +EV++LFF PAR FLK+E+ E++ I D++ ++A++ Sbjct: 123 RILIDGGTFTDCIPYGAAPGTTIEVKELFFNTPARRKFLKTERTESSKIQDIVGKLALSN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + G + ++ + G N+ + +S I ++G Sbjct: 183 PHIAFKLTIDDR---VAIITPGTGPIQDTVAALYGYKTKNDIFPIAYESEHIYIEGVVSK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT + + +N R + DK IL I AY +P YP+V+L + + VD+NV Sbjct: 240 PTLLKSTRIWQTIIVNNRVISDKTILKAIDNAYHALLPKSGYPLVLLHITVPASMVDINV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN----KKGISTSSVLSKKMISSFHQDNAPKTHL 355 HP KS ++F + II + +I A+N ++ SS ++ + + Sbjct: 300 HPRKSEVKFEDDKIIFKAVYHAILNALNNPLHERYERESSSFTQPLETESQGSGYNSYQA 359 Query: 356 PKYATSLTNT------------------------------------QEKLFLQENRLSTN 379 P+ + +T +EK F +T Sbjct: 360 PQVLSDHNDTAEHIATAIDYDKVFGGRRTKGYEVLRQDTRDFVDALKEKGFTPPAPKATY 419 Query: 380 DLLPSDDPTYSE-----DNDPVEESEATHYQLGIAC---------------AQIHQNYII 419 + ++ +++ + E+ E H Q+ YI+ Sbjct: 420 EQEAFEESSFTSVPTAYTSYTAEDKEKFHQIQEQHIEDESRDIQKSGFLPMGQVASCYIL 479 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ D L I+DQHAAHER+ ++++ +S I Q+LL P + E E L+ + Sbjct: 480 AKKGDDLYIIDQHAAHERVRYDRL--CKSSEAIPMQSLLVPTYSNATEDEMNLVENEQDA 537 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L LG + E GPN I + P L + ++L + + D Q +LA Sbjct: 538 LLDLGFEVELGGPNQIKLVGAPVDLVESKAQEILSYVFTFLHDHEQPTKAQ-LRHEMLAY 596 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C G+I+SG + +M L+ ++ C HGRPT IK ++ KLF R Sbjct: 597 ASCRGAIKSGHNLNMYQMTTLIEDLFHTDKPYVCPHGRPTIIKFTPDELGKLFLR 651 >gi|292572544|gb|ADE30459.1| DNA mismatch repair protein MutL [Rickettsia prowazekii Rp22] Length = 595 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 227/597 (38%), Positives = 363/597 (60%), Gaps = 7/597 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE IN+IAAGE+IERP+ +KEL+EN++D S++++ ++ GK+ ++D+G Sbjct: 1 MTIKFLSESTINRIAAGEVIERPASVVKELVENAIDGGSTKIDIILERAGKNLIIVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT +E+ +AV+RH TSK+++ DF NIHTFGFRGEAL SI A+S + + S+ + + Sbjct: 61 IGMTDKELEIAVKRHTTSKLNESDFFNIHTFGFRGEALASIAAISKMLITSKKREADKAF 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G + N GT +EVRDLFF PARL FL+S++ E D+++++A+A+ Sbjct: 121 QIKLIGGNKQQITVSVHNEGTKIEVRDLFFATPARLKFLRSDKTELAASIDIVKKIALAH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P++SF N K+ Q+ + N +RI VIG+ FI NA ++ K+ + ++ GY+ Sbjct: 181 PRISFNLIHDNKNLLKLKGQNKDSETNLKQRIIDVIGDVFIKNAAYIDFKTPDFSICGYS 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 IPT+N+ ++ ++FIN R ++DK + +R AY + + RY + V+ L+IDP+ VDV Sbjct: 241 SIPTYNKASSEDQFLFINNRPIKDKLLQVALRVAYQDYLARDRYALCVIFLQIDPQLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK+ +RF +P +RN +I++I+ A+ K T++ + S +++ P H Sbjct: 301 NVHPAKAEVRFHDPNYVRNILIEAIKNALTNKSQITATTIGSDKNSLVNKE--PTIHKAT 358 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 S + + N + + + Y+ G+A AQ+H Y Sbjct: 359 NVNSKASEYTSFNFKRNTAYHTLPYGKIEQEVGKCIEH-NNQSHKQYKFGVAKAQLHTTY 417 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI-MEH 476 IISQT D +VI+DQHAA+ERL + K++ + ++ Q LL PEI++L + A E+ Sbjct: 418 IISQTEDSIVIIDQHAAYERLGYAKIKYCLKNGELVKQRLLIPEIVELSSQKKADCLYEN 477 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L +L + E+FG +I + EIP IL N+ +L++D+ D + D + L++ IE++ Sbjct: 478 REKLFKLSLTIEKFGEKSIIVTEIPNILGDVNVQKLIQDLADHLSDFAKNMPLKELIEHV 537 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + C+ SIR+ RK+ + EMN LLR+ME S+QCN+ RPT+I+LKL DIE LF Sbjct: 538 IKIYICHYSIRAARKLSADEMNSLLRQMENMSFSAQCNNNRPTYIELKLKDIELLFR 594 >gi|269958988|ref|YP_003328777.1| DNA mismatch repair protein (MutL) [Anaplasma centrale str. Israel] gi|269848819|gb|ACZ49463.1| DNA mismatch repair protein (MutL) [Anaplasma centrale str. Israel] Length = 632 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 214/628 (34%), Positives = 334/628 (53%), Gaps = 38/628 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L K +N+IAAGE+I+ P+ +KEL+ENS+DA ++ + +I GG++ + D+G Sbjct: 7 PIVVLDAKTVNKIAAGEVIDCPASVVKELVENSIDAGATTINVLIDKGGRNLISVIDDGC 66 Query: 62 GMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ +E+ A H TSK+ D D +NI + GFRGE L SI AV+ ++S+ Sbjct: 67 GIPRDEMERAFICHATSKLPDNDLNNIRSMGFRGEGLTSIAAVARTKMVSKYRGCTEAWS 126 Query: 121 IAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + GEK + P A+ GT +EVRDLFF P RL FL++E+ ET I D++ R A A Sbjct: 127 IVLEGGEKTRDLSPEALPCGTSIEVRDLFFATPTRLKFLRTEKAETQSIVDLMYRFATAR 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQV--IGEDFINNAVELNEKSNEITLQGYT 237 +F+ + +K + R+ ++ G+ F ++E+ S+ I + GY Sbjct: 187 FSTAFSLTIADKQIFKYPA---REDLMSRLWEMKPFGDAFREQSLEVRFHSDAINITGYI 243 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +PTFNR + Y F+NGR V + I++AY+E IP R+PVVV+ +EI P VDV Sbjct: 244 SVPTFNRSRPDMIYTFVNGRPVHSTLFMGAIKSAYSEFIPRDRHPVVVMCMEILPGDVDV 303 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS--TSSVLSKKMISSFHQDNAPKTHL 355 NVHP+K +RFRN + + +++++ A++ + F DN P Sbjct: 304 NVHPSKLEVRFRNRKQVYSVVVEALATALSSNVYRELPPRTPVGGGLDHFAVDNTPVLDT 363 Query: 356 PKYAT---------------------SLTNTQEKLFLQENRLS-------TNDLLPSDDP 387 P Y + E R + + + P Sbjct: 364 PHYGKVHDYGVAVGPKLSVQQTGGGGEFLSKPEHAIENPPRAAELFSFLGSGSSRRTTRP 423 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 S D++ LG A Q+ YI+S+ D ++IVDQHAAHERL +E M++ Sbjct: 424 VLSYDSEAHIVPLIEELPLGNAVCQLFDRYIVSRAGDHVIIVDQHAAHERLTYEYMKKVT 483 Query: 448 NSTKITSQTLLTPEIIDLLEGEC-ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 + Q LL PE+++L L+ E+ E L + G+ E G +A+RE+PAIL Sbjct: 484 ADEGMKRQVLLMPELVELDNEYELELLGEYKEKLLKFGLVIEPMGSMVVAVREVPAILGV 543 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 ++ ++ I++ I++ ++++I+++ T+ACY SIRSGR ++ EMN LLR+ME Sbjct: 544 FDVKAMIAKIVESIVEVGDALFMREKIKHVCGTIACYSSIRSGRTLKLEEMNSLLRQMED 603 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 P+S QCNHGRPT++KL LS+I+KLF R Sbjct: 604 TPHSGQCNHGRPTYVKLSLSEIDKLFER 631 >gi|317052213|ref|YP_004113329.1| DNA mismatch repair protein MutL [Desulfurispirillum indicum S5] gi|316947297|gb|ADU66773.1| DNA mismatch repair protein MutL [Desulfurispirillum indicum S5] Length = 595 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 187/603 (31%), Positives = 294/603 (48%), Gaps = 17/603 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI L + +INQIAAGE++ERP +KEL+EN+LDA++ RVE I GGG +ITD+G Sbjct: 1 MKIGVLPDTVINQIAAGEVVERPVNVVKELVENALDADARRVEIAIEGGGIKRIRITDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM ++ + V+RH TSKI DD + +H+ GFRGEALPSI +VS + + SR P TG Sbjct: 61 CGMARHDLMLCVERHATSKIRSFDDLTQLHSMGFRGEALPSIASVSRMHITSRQPDELTG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + I G +++ VR NPGT VE+ DLF+ +PAR FL++ Q E NLIT +++ A+A Sbjct: 121 HCLHIEGGRMTEVREEGANPGTRVEIADLFYNVPARKKFLRTPQTEQNLITSLVQSFALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT-LQGYT 237 +P+ +F++S +++ ERI QV G + E + ++ T Y Sbjct: 181 HPQTAFSYSVDGRAQFQFPP----ATIDERIRQVFGRENATALREGRSQQDDGTGFHLYL 236 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R + Y F+N R V+D+ + + ++ AY IP GR+P L L IDP VDV Sbjct: 237 SRPDNTRSRRDSLYFFVNRRHVKDRLLGAWLQRAYRHLIPQGRHPFGALFLNIDPALVDV 296 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMISSFHQDNAPKTH 354 NVHP K+ +RF + + Q+I++ + S+ + + F + Sbjct: 297 NVHPTKTEVRFFDIGALGRLFEQAIRQVLIEGETPFHSSPEPPAPAVPRGFPSTGGWSSS 356 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 P ++ + ++ P P+ ES A Q Sbjct: 357 APHRNFGGQISEPAPAILPP---SHLPARHGQPASPYGETPLWESAAPSTADFQILGQFQ 413 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +I+ + L++VDQHAA ER+ FE++ + ++ Q LL P I L E + Sbjct: 414 DTFIVGIKDEELILVDQHAAMERINFEEISDLYADNRVEQQPLLFPHPIGLTPQEQLTLN 473 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT---LQD 531 H L +G + A + P L + +R+I + + Sbjct: 474 THMPQLQAMGFTIDIIDDTACLVEA-PLDLPPQQAMDTIREICSRAGEEKDDQPESAQES 532 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 + ++ TMAC+ S+++ + + +M LL+ + + C HGRPT I + K Sbjct: 533 FRQLVMKTMACHRSVKANKTLNHQQMEELLQRLFQCRQPYTCPHGRPTLISYSREQLWKQ 592 Query: 592 FGR 594 F R Sbjct: 593 FLR 595 >gi|209543574|ref|YP_002275803.1| DNA mismatch repair protein MutL [Gluconacetobacter diazotrophicus PAl 5] gi|209531251|gb|ACI51188.1| DNA mismatch repair protein MutL [Gluconacetobacter diazotrophicus PAl 5] Length = 639 Score = 485 bits (1248), Expect = e-134, Method: Composition-based stats. Identities = 215/632 (34%), Positives = 342/632 (54%), Gaps = 47/632 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+LSE+++N+IAAGE+IERP+ A+KEL+EN++D+ + R+ ++ GG ++ D+G G Sbjct: 14 IRRLSEQVVNRIAAGEVIERPAAALKELVENAIDSGARRIAVLLERGGIERIEVVDDGCG 73 Query: 63 MTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT +++ +AV+RHCTSK+ D+ I T GFRGEALPSIGA + LT+ SRP ++ ++ Sbjct: 74 MTPDDLLLAVERHCTSKLRDETLVRIETLGFRGEALPSIGAAARLTVTSRPHGADSAWRV 133 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++ G + + P A PGT V V DLFF PAR FLKS +VE +RR+A++ P Sbjct: 134 SVEGGLVGAPAPCAGPPGTRVTVEDLFFATPARRKFLKSPRVEAGHADITVRRLALSVPD 193 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 V+F + + + R++ ++ + + + + + ++ L G+ P+ Sbjct: 194 VAFRLQLDDRVVFDLPA----QDLESRVAAILESEGADGMLPVEGRRGDLVLDGFACGPS 249 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 +R A+ + +NGR V D + + +R AY I GR+ VV L L I P VDVNVHP Sbjct: 250 VHRATASGQILLVNGRPVVDPVLRTAVRVAYRHVIEHGRHAVVALSLTIPPDLVDVNVHP 309 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY--- 358 AK+ +RF +P +R +I ++ +A+ + + A + P Sbjct: 310 AKTELRFADPAAVRGLVIGALGRALGSGAGVA---GVRPGLLQSRPATASRIWYPSADAP 366 Query: 359 -------------------ATSLTNTQEKLFLQENRL-----------STNDLLPSDDPT 388 SL T+ L R+ + Sbjct: 367 SAGLAPAAAPAPAIFSAPGRDSLAGTRLDLGAPAARVLDDPPAAPPPDAGAAGGAGAGGP 426 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDF 447 + D ++A Y LG + AQ+ YI++ + DG LV+VDQHAAHERL E++R + Sbjct: 427 DAAPPDAAILADAADYPLGASVAQVMGTYIVAVSGDGSLVLVDQHAAHERLTHERLRARY 486 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + +Q LL PE++ L G+ L++ L LG++ E FG A+ +R +PA+L Sbjct: 487 LDGTLRAQRLLLPEVVTLPRGQADLLLSFAGTLAALGVEIEPFGGGAVLVRALPALLGTD 546 Query: 508 NIPQLLRDIIDEIIDS-----STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 + LLRD+ DE+ + T L R++ ++A MAC+GS+R+GR + EM+ LLR Sbjct: 547 DPAGLLRDMADELAEDDLADPGDTGALDGRLDAVIARMACHGSVRAGRSLTRAEMDALLR 606 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +ME+ P + C+HGRPT++KL +D+EKLFGR Sbjct: 607 DMERTPRAGTCSHGRPTWLKLSRTDLEKLFGR 638 >gi|114775687|ref|ZP_01451255.1| DNA mismatch repair protein [Mariprofundus ferrooxydans PV-1] gi|114553798|gb|EAU56179.1| DNA mismatch repair protein [Mariprofundus ferrooxydans PV-1] Length = 611 Score = 485 bits (1248), Expect = e-134, Method: Composition-based stats. Identities = 212/605 (35%), Positives = 340/605 (56%), Gaps = 23/605 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I LS ++ NQIAAGE++ERP+ A+KELIENS+DA ++RV IAG GK ++ DNG+G Sbjct: 15 IHILSPQVANQIAAGEVVERPASAMKELIENSIDAGATRVVVRIAGAGKKRIEVDDNGYG 74 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M++ + +++QRH TSKI S+D I + GFRGEALPSI +VS + + + G + Sbjct: 75 MSAADAELSLQRHATSKIASSEDLHRIASHGFRGEALPSIASVSRFRMQT--ASDGEGVE 132 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G + V+P A GT +EV DLF PARL+F+++++ E + I D R +A+A P Sbjct: 133 VRVDGGGETVVKPAAPRKGTRIEVLDLFLNTPARLHFMRTDKTEESAIVDTFRELALANP 192 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ R++ + R+ V+G+ F +N+VE + + + + G+P Sbjct: 193 GVAMRLELDARTRFEF----ALQDEQARVQAVMGQGFADNSVEQRIEHEGMQISAWLGLP 248 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 TF+ ++ + +NGR ++DK +++ +R Y + + RYPV V+ LEIDP VDVNVH Sbjct: 249 TFHHRDSTRMMFLVNGRVIRDKQLIAALRAGYRDVMFHDRYPVAVVRLEIDPADVDVNVH 308 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +RF++P +R I+ ++ I + G S SS + + + + T LP + Sbjct: 309 PAKREVRFKSPQTVRAGIVACVRAGIERMGHSVSSTTGEPALQAMQRS----TGLPAFNG 364 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL------GIACAQIH 414 F + +T + T + P Y G AQIH Sbjct: 365 GQDGGGMPRFSSGDYRATGQQRMPAEMTRMLFSPPEVRESGQVYDATARLDLGYPLAQIH 424 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 + YI++QT G+V++DQHAAHER+ +EK++ I +Q LLTPE + L A + Sbjct: 425 RCYILAQTDSGVVLIDQHAAHERMTYEKLKAQLAGGDIATQMLLTPEALTLDGEAAAWLH 484 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE-----IIDSSTTYTL 529 +H LH G+ E G + IR +PA+L + + +++ ++++ + + + Sbjct: 485 DHAVALHHFGVDIEAAGDQSFLIRSVPAMLGGEALVEMVTELVESCRLIGVDHEAGSSGG 544 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 +E L AC GSI+SGR++ E LLREME+ PN +QCNHGRPT+++L L++++ Sbjct: 545 ARVLERWLGNRACKGSIKSGRRLSHEEQLSLLREMERTPNIAQCNHGRPTYVRLSLNELD 604 Query: 590 KLFGR 594 +LFGR Sbjct: 605 RLFGR 609 >gi|292669798|ref|ZP_06603224.1| DNA mismatch repair protein MutL [Selenomonas noxia ATCC 43541] gi|292648595|gb|EFF66567.1| DNA mismatch repair protein MutL [Selenomonas noxia ATCC 43541] Length = 620 Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats. Identities = 188/619 (30%), Positives = 297/619 (47%), Gaps = 32/619 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + IN+IAAGE++ERP+ +KEL+EN++DA ++ VE I GGG SF ++TDNG Sbjct: 3 RIHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGAAAVEVEIMGGGTSFIRVTDNGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + A+ RH TSKI+ D + T GFRGEALP+I +VS +L++R P ++ G Sbjct: 63 GMARADAQTAILRHATSKIASVSDLQMVATLGFRGEALPTIASVSRFSLLTRQPADDLGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G K + GT V V DLFF PAR FLK+ E I+D + R+A++ Sbjct: 123 RVDILGGKTPEIEDAGCEIGTTVRVEDLFFNTPARKKFLKTNATEAGRISDFVIRLALSR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS--NEITLQGYT 237 P ++F F + +G+ I + G D + L+ +I + GY Sbjct: 183 PDIAFRFINNNRLTLM---TAGDGSLRHAIESIYGGDAAAALIPLDFHDAEADIRITGYI 239 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P+ R + +NGRT+Q++ I I Y +P +P+ VL +E+ R +DV Sbjct: 240 SKPSMIRSSRAWQTYIVNGRTIQNRAIAKAIDNVYRALVPKMGFPLAVLCIEVPQRTIDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD--------- 348 NVHP K+ ++F + I + +S+ AI T+++ + FH + Sbjct: 300 NVHPQKTELKFEDEGRIFKAVYKSVLDAIRGAAGETAAIAAAVERPKFHYEAAPLNLAAP 359 Query: 349 -NAPKTHLPKYATSLTNTQE------------KLFLQENRLSTNDLLPSDDPTYSEDNDP 395 + + Y+T Q L ++ + T + Sbjct: 360 AHPAGSSASSYSTPPMRPQTVHEAVQWAGQRVDLRTAQDAVGTERAEERSAFAAALSPSV 419 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 ++++ T + Q+ YII+Q+ L I+DQHAAHER++F++ ++ I SQ Sbjct: 420 GQDADRTIEGSLLPIGQVDLTYIIAQSAQTLYIIDQHAAHERILFDRF--SAHADGIPSQ 477 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 +L I+ E I E+ E RLG E G + E PA + +R+ Sbjct: 478 QMLVHAILSFDAHEAQYIEENAELFDRLGFHLEPAGEREYRLTEAPADIPLDEAEATIRE 537 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 I+ + D R I ATMAC +I++G ++ +M LL E+ P C H Sbjct: 538 ILISLGDLHAATPAHLRQAGI-ATMACRAAIKAGEELSIRQMEILLDELRATPFPFTCPH 596 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRPT +K D+ K+F R Sbjct: 597 GRPTILKFDTHDLAKMFKR 615 >gi|171057810|ref|YP_001790159.1| DNA mismatch repair protein MutL [Leptothrix cholodnii SP-6] gi|170775255|gb|ACB33394.1| DNA mismatch repair protein MutL [Leptothrix cholodnii SP-6] Length = 651 Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats. Identities = 194/641 (30%), Positives = 320/641 (49%), Gaps = 56/641 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L +++I+QIAAGE+IERP ++EL++N+LDA + ++ +A GG + D+G G Sbjct: 16 IRELPDELISQIAAGEVIERPGSVVRELLDNALDAGARQITLRLAAGGVRAILVEDDGAG 75 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A++RH TSKI+ D + T GFRGEAL ++GAV+ L + SR + + Sbjct: 76 IPADELPLALKRHATSKITSLHDLEQVGTMGFRGEALAALGAVAELAITSRTADSAHAMR 135 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ P A + GT VEVR+LFF PAR FLK++ E + +RR A+A P Sbjct: 136 IDARSGEL---APAARSVGTTVEVRELFFATPARRKFLKTDATELAHCLEAVRRHALARP 192 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+F + G +R+ V+GE+FI + E+ ++ + + G G+P Sbjct: 193 AVAFAVWHEGRLLEQWRA----GTPEQRVRDVLGEEFIAASREVTAQAGPLQVYGRVGLP 248 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R A+ Y ++NGR V+D+ + +R+AY + + R P VL +++ P +VDVNVH Sbjct: 249 EAARARADLQYAYVNGRHVRDRLVAHGVRSAYEDVLHGSRQPSYVLFVDVPPERVDVNVH 308 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAIN-------------------------KKGISTSS 335 P KS +RFR+ + + +S++ A+ I + Sbjct: 309 PTKSEVRFRDSREVHQALRRSVEAALALPRLHEAGAAPADGPAAVEPTGAPPNAPIDRNP 368 Query: 336 VLSKKMISSFHQDNAPKTHLP-------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + ++ A + P + A L + + + Sbjct: 369 DVWTGNPTASTASTAWRAPYPVQGSLALQQAAQLHAREMPPGFSGSPGYSTAPSGDPATA 428 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + D + LG A AQ+ Y++++ GLVIVD HAAHER+++E+++Q Sbjct: 429 FPLRTDHAAVDPQDEWPLGRALAQLGGAYVLAENRRGLVIVDMHAAHERIVYERLKQSLA 488 Query: 449 ST------------KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 S I +Q +L P E A H L +LG+ +A Sbjct: 489 SRRGAAEGNENGAPGIEAQPMLIPATFAATPTEIATAEVHAATLLQLGLDLTPLSAGVLA 548 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSST---TYTLQDRIENILATMACYGSIRSGRKMQ 553 +R PA L + L R ++ E+ S+T + +Q + ILATMAC+G++R+ R++ Sbjct: 549 LRSRPAALRDADPVALARSVLAELGQSATGEASTLVQRAHDEILATMACHGAVRANRRLT 608 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME + CNHGRPT+ ++ L +++ LF R Sbjct: 609 LEEMNALLRDMETTDRADLCNHGRPTWRQVTLRELDTLFLR 649 >gi|110800749|ref|YP_695805.1| DNA mismatch repair protein [Clostridium perfringens ATCC 13124] gi|122958915|sp|Q0TRD5|MUTL_CLOP1 RecName: Full=DNA mismatch repair protein mutL gi|110675396|gb|ABG84383.1| DNA mismatch repair protein MutL [Clostridium perfringens ATCC 13124] Length = 674 Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats. Identities = 182/674 (27%), Positives = 312/674 (46%), Gaps = 85/674 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L+ N+IAAGE++ERPS +KEL+ENSLDA + + I GG+S +I D+G Sbjct: 3 RINILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A H TSKI D D +I+T GFRGEALPSI +++ + S+ + G Sbjct: 63 GVHPEDVEKAFNPHATSKIKDTYDIFSINTLGFRGEALPSIASIARVDFKSKVSDFDMGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ISG + S+ +MN GT +EVRDLFF +PAR FLK+ E+ LI D++ R+++A Sbjct: 123 ELVISGGEKESLTDCSMNRGTQIEVRDLFFNVPARKKFLKTTARESALINDLVNRISLAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF K+ NG + I + G+ N + E + ++ G+ G Sbjct: 183 PDVSFKLFNNNK---KILNTYGNGKLIDVIRTIYGKSTAENLIYFEEHKDTASVYGFIGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 T R + N +F+N R V+++ + + A+ G++P VL ++ P +DVN+ Sbjct: 240 DTLARASRNNQSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNI 299 Query: 300 HPAKSYIRFRNP----TIIRNFIIQSIQK-----------------AINKKGISTSSVLS 338 HP KS I+F++ ++ + + ++++ A+ ++ I S Sbjct: 300 HPTKSEIKFKDERFIFKVVFDAVHSAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDEE 359 Query: 339 KKMISSFHQ-------DNAPKTHLPKYATS----------------LTNTQEKLFLQENR 375 + + ++ K + Y S QE+ F N Sbjct: 360 ISTLEKLKENINYKVSEDRKKEEIYSYNPSKDYEAKTEVNIPVDFLSKENQEESFSINNS 419 Query: 376 LSTNDLLPSDDPTYSEDNDPVEESEATH-------------------------------- 403 L N+ + + ++E Sbjct: 420 LENNNFKEGSAKREISYDPILIKNELKDKVSESTSESLERSDYKCNKNEYGNSIEEIIYR 479 Query: 404 ---YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 + Q ++ YI+++ L ++DQHAAHE+++FEK D ++ Q L+ P Sbjct: 480 EAKFPKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKRVEIQPLMIP 539 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 ++ L + E+ E + G K FG N+I I E+P L K N +L+ +I+ + Sbjct: 540 LVVTLPTEDYLYYDENKEIFEKAGFKISDFGDNSIRIEEVPYFLDKLNPTELITSMINNL 599 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 T T++ + I A+M+C ++++ + +EM L+ ++ + C HGRPT Sbjct: 600 KKMGTGETVEVKYNKI-ASMSCRAAVKANDVLSILEMENLIEDLRYINDPFHCPHGRPTI 658 Query: 581 IKLKLSDIEKLFGR 594 IK +++K F R Sbjct: 659 IKFTSYELDKKFKR 672 >gi|168214982|ref|ZP_02640607.1| DNA mismatch repair protein MutL [Clostridium perfringens CPE str. F4969] gi|170713599|gb|EDT25781.1| DNA mismatch repair protein MutL [Clostridium perfringens CPE str. F4969] Length = 674 Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats. Identities = 182/674 (27%), Positives = 311/674 (46%), Gaps = 85/674 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L+ N+IAAGE++ERPS +KEL+ENSLDA + + I GG+S +I D+G Sbjct: 3 RINILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A H TSKI D D +I+T GFRGEALPSI +++ + S+ + G Sbjct: 63 GIHPEDVEKAFNPHATSKIKDTYDIFSINTLGFRGEALPSIASIARVDFKSKVSDFDMGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ISG + S+ +MN GT +EVRDLFF +PAR FLK+ E+ LI D++ R+++A Sbjct: 123 ELIISGGEKESLTDCSMNRGTQIEVRDLFFNVPARKKFLKTTARESALINDLVNRISLAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF K+ NG + I + G+ N + E + ++ G+ G Sbjct: 183 PDVSFKLFNNNK---KILNTYGNGKLIDVIRTIYGKSTAENLIYFEEHKDTASVYGFIGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 T R + N +F+N R V+++ + + A+ G++P VL ++ P +DVN+ Sbjct: 240 DTLARASRNNQSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNI 299 Query: 300 HPAKSYIRFRNP----TIIRNFIIQSIQK-----------------AINKKGISTSSVLS 338 HP KS I+F++ ++ + + ++++ A+ ++ I S Sbjct: 300 HPTKSEIKFKDERFIFKVVFDAVHSAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDEE 359 Query: 339 KKMISSFHQ-------DNAPKTHLPKYATS----------------LTNTQEKLFLQENR 375 + + ++ K + Y S QE+ F N Sbjct: 360 ISTLEKLKENINYKVSEDRKKEEIYSYNPSKDYEAKTEVNIPVDFLSKENQEESFSINNS 419 Query: 376 LSTNDLLPSDDPTYSEDNDPVEESEATH-------------------------------- 403 L N+ + + ++E Sbjct: 420 LENNNFKEGSAKREISYDPILIKNELKDKVSESTSESLERSDYKCNKNEYGNSIEEIIYR 479 Query: 404 ---YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 + Q ++ YI+++ L ++DQHAAHE+++FEK D ++ Q L+ P Sbjct: 480 EAKFPKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKRVEIQPLMIP 539 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 ++ L + E+ E + G K FG N+I I E+P L K N +L+ +I+ + Sbjct: 540 LVVTLPTEDYLYYDENKEIFEKAGFKISDFGDNSIRIEEVPYFLDKLNPTELITSMINNL 599 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 T T+ + I A+M+C ++++ + +EM L+ ++ + C HGRPT Sbjct: 600 KKMGTGETVAVKYNKI-ASMSCRAAVKANDVLSILEMENLIEDLRYINDPFHCPHGRPTI 658 Query: 581 IKLKLSDIEKLFGR 594 IK +++K F R Sbjct: 659 IKFTSYELDKKFKR 672 >gi|146329481|ref|YP_001210000.1| DNA mismatch repair protein MutL [Dichelobacter nodosus VCS1703A] gi|226723032|sp|A5EXM6|MUTL_DICNV RecName: Full=DNA mismatch repair protein mutL gi|146232951|gb|ABQ13929.1| DNA mismatch repair protein MutL [Dichelobacter nodosus VCS1703A] Length = 590 Score = 484 bits (1245), Expect = e-134, Method: Composition-based stats. Identities = 183/596 (30%), Positives = 305/596 (51%), Gaps = 13/596 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L +INQIAAGE+IERP+ +KE++EN++DA ++R+ I G +++DNG Sbjct: 3 KILLLPPALINQIAAGEVIERPASVVKEIVENAIDAGATRLALEIEAAGSKLIRLSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A H TSKI +D + + GFRGEAL SI ++S TL S ++ Sbjct: 63 GIEKEDLALAFTTHATSKIRTLEDLEQVSSLGFRGEALASIASISKTTLTSCTQSSDHAW 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I+ + ++ P A GT +E+RDLF+ PAR FL+S++ E IT ++ +A++ Sbjct: 123 KISPHLNE--NITPAAHPQGTTIEIRDLFYNTPARKKFLRSDRTERYHITQLLAGIALSR 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 T + E + V+G++F+ ++E+ + + L G+ G+ Sbjct: 181 APFVITLHEQDRKILEY----GGKTLKESLKSVMGDEFLAQSIEIQAEHEGMHLHGWVGL 236 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT+ ++ Y F+N R V DK + I+ AY + I R+P+ VL L +DP VDVN Sbjct: 237 PTYTHQQTDKQYFFVNQRLVSDKLVAHAIKQAYEDMIHRQRHPIFVLFLTLDPALVDVNA 296 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP+K +RFR + +F+ S+ +A+ + + S ++ T P + Sbjct: 297 HPSKREVRFRQAQLTHDFMFSSLHRALRNIQPRAAQLTPLSSASPKLPESTTATAQPHHK 356 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 LQE + + P + P E + + LG A QIH +I+ Sbjct: 357 MIPHTFARPPRLQETKAYYQ---WAQTPPPAVTPAPQPEIKKINLPLGQALGQIHGTFIV 413 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQD-FNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 ++ GLV+VD HAAHER+++E+ + +I Q LL P + L + + +H Sbjct: 414 AENAQGLVVVDMHAAHERILYEQFKSVLKTQKQIPVQRLLLPLPLTLTPVQQDSLAQHGA 473 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L LG + +PA L + ++ D++ E+ + + LQ E I+A Sbjct: 474 WLKTLGFDWT-INDKEFILLTVPARLKNSDCISIIGDVLQELSEFPKSTQLQRAQEQIIA 532 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M C+ ++R+ + EMN+LLR++E P + QCNHGRPT+I+L + ++ LF R Sbjct: 533 NMCCHQAVRAHDLLSISEMNQLLRDLETTPAAGQCNHGRPTWIQLDATQLDALFLR 588 >gi|170017651|ref|YP_001728570.1| DNA mismatch repair ATPase [Leuconostoc citreum KM20] gi|238688974|sp|B1N024|MUTL_LEUCK RecName: Full=DNA mismatch repair protein mutL gi|169804508|gb|ACA83126.1| DNA mismatch repair enzyme (predicted ATPase) [Leuconostoc citreum KM20] Length = 668 Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 181/654 (27%), Positives = 308/654 (47%), Gaps = 65/654 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS + NQIAAGE+IERP+ +KEL+EN++DA +++++ V+ G++F ++ DNG Sbjct: 3 KIHELSNLLANQIAAGEVIERPASVVKELVENAIDAGATQIDIVVENAGETFIRVVDNGA 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+A RH TSKI+D D NI + GFRGEALPSI A++ + L ++ + TG Sbjct: 63 GIDPVDVPLAFTRHATSKITDRHDLFNIVSLGFRGEALPSIAAIADVELRTKTTETTTGL 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I G K S P GT++ VRDLF+ PARL +LK Q E + I D+I R+A++Y Sbjct: 123 NYHIKGGKEISATPANGRRGTVITVRDLFYNTPARLKYLKKHQTELSKIVDIINRLALSY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++FT S + + NGN + I+ + G D + + ++++ + G+ + Sbjct: 183 TGIAFTVSADGR---SLLRTTGNGNQQQVIAGIYGRDNAQKMLAIAGENDDFNITGFISL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P RG+ V +NGR +++ + + + Y + +GR+P+ V+ + +P +DVNV Sbjct: 240 PELTRGSREYLTVLVNGRYIKNFAVSNAVIRGYGSKLMVGRFPMGVININTNPLLIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS------------------------ 335 HP KS IR T + ++ +I+ + ++ + + Sbjct: 300 HPQKSEIRLSKETELAELLVTTIKNRLAEENLIPDAYETLYGQQNKQQNTQNTQNTFTPK 359 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLT-------------------------------N 364 S NA K S + Sbjct: 360 APWIAAEDSMDGHNAEKMSSQPIRRSPSLVTPVEITKREELSSDRVLTFTQKYTNELPQP 419 Query: 365 TQEKLFLQENRLSTNDLLPSDDP----TYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 E + E +++ + ++S++ P+ E + T + Q+H ++ + Sbjct: 420 VFETDNVVEQQVTEPTVTYQSQYSETGSHSQETLPLSEQKPTGFPALDYIGQMHGTFLFA 479 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 Q+ D ++DQHAA ER+ +E R+ Q LL P ID E I +H +L Sbjct: 480 QSEDSFFLIDQHAAQERVNYEFYREQIGQVTNDQQRLLVPITIDYSVSEMLAIADHQPEL 539 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 LG++ E FG + IRE P K + +R++ D ++ T+ E M Sbjct: 540 MALGLRLEPFGATTMIIREHPTWFEKGQEEETVREMTDWLLRDGQ-LTVAQFREKAAIMM 598 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C +IR+ + +LL + N C HGRP + L+++EK+F R Sbjct: 599 SCKRAIRANMHLSDTAARQLLAHLSMAENPYNCPHGRPVLTQFTLTEMEKMFKR 652 >gi|302391924|ref|YP_003827744.1| DNA mismatch repair protein MutL [Acetohalobium arabaticum DSM 5501] gi|302204001|gb|ADL12679.1| DNA mismatch repair protein MutL [Acetohalobium arabaticum DSM 5501] Length = 660 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 169/664 (25%), Positives = 305/664 (45%), Gaps = 75/664 (11%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 M I+KL ++++++IAAGE+IERP+ +KEL+ENS+DA+S ++E + GGK Q+ D Sbjct: 1 MPKQIKKLPQEVVSKIAAGEVIERPASVVKELVENSIDADSDKIEIKVNNGGKDLIQVID 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+GMT E+ +A++RH TSKI++ D +I + GFRGEALPSI A+S LT+ +R Sbjct: 61 TGYGMTREDAELALERHATSKITEANDLFSIRSLGFRGEALPSIAAISRLTMKTRTEDKL 120 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G + I+G +I + GT + V+DLF+ P R +LK+ E I+D++ R+A Sbjct: 121 GGTLVKINGGEIKKIEDAGCPIGTNIIVKDLFYNTPVRYKYLKTSATEIRRISDIVNRLA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 +AYP+++F S + K+ NGN + I V G++ + + ++ + + + GY Sbjct: 181 LAYPEITFKLSHNQK---KVLETPGNGNLMDTILSVYGKEVAKSMIAVDYEDKYMQVSGY 237 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P +R + FIN R ++ + + I AY + GR+P+ +L ++++P VD Sbjct: 238 VSKPNISRASKKHQSFFINRRYIKSRALSEAISKAYHTLLAKGRHPIAILTIKLNPVLVD 297 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHP K + F + + + +++A++ + L+ K ++ + ++ + Sbjct: 298 VNVHPTKMEVNFSREKEVASVLQNGVKEALSNADLIPEVKLNSKDSTAVSKKDSQDSKQQ 357 Query: 357 K------------------YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 + +TQ+ +++ D + + N Sbjct: 358 QELELTKKRKFSSEKNKKKSQKKEKSTQKTTNDNQDKSIQTDQINETKESSDRINRKESA 417 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 E + + + + ++ ++ + + +D + ++S L Sbjct: 418 EELKNGIEKQSKQA--DYFQKREQSNEKEKKNKESVAIKESQSDYNKDDATKSLSSFLPL 475 Query: 459 TPEIIDL---------------LEGECALIMEHDEDLHR--------------------- 482 E L E E + Sbjct: 476 GQIHNTYIIAQGEDGFYIVDQHAAHERILYNELMEKFKQAEIKSQSLLMPVRLELTNPEI 535 Query: 483 ------------LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 LG + E FG +R +P +L K +I +L DIID ++D Sbjct: 536 EILEENSEHLKNLGFEFEAFGGQTYLVRAVPNLLHKLDIKELCLDIIDNLLDKGKIQEPT 595 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 + IE++L M+C G+I+SG+ + EM LL+++E++ N C HGRPT I +++K Sbjct: 596 EIIEDLLVIMSCRGAIKSGKSLVPGEMESLLQQLEESGNQHTCPHGRPTIIHFSKKELDK 655 Query: 591 LFGR 594 F R Sbjct: 656 KFKR 659 >gi|225018515|ref|ZP_03707707.1| hypothetical protein CLOSTMETH_02462 [Clostridium methylpentosum DSM 5476] gi|224948716|gb|EEG29925.1| hypothetical protein CLOSTMETH_02462 [Clostridium methylpentosum DSM 5476] Length = 645 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 186/651 (28%), Positives = 317/651 (48%), Gaps = 63/651 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I L + + IAAGE+IERP+ +KEL+ENS+D+ ++ V I GGK +ITDN Sbjct: 1 MPQIHLLDKAVSELIAAGEVIERPASIVKELLENSIDSGATSVTVEIKTGGKQLIRITDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G++ +++P A RH TSKI D +I T GFRGEAL SI AVS + L+++ + Sbjct: 61 GCGISPDDVPKAFLRHATSKIQTEPDLEHIATLGFRGEALASICAVSKIELLTKTAEEQF 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + ISG + + GT + VR++F+ +PARL FLK + E N I ++ ++A+ Sbjct: 121 GTRYTISGGEGGELEETGCPDGTTILVREIFYDVPARLKFLKKDVTEGNAIQSIVDKIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P++S F ++ NG+ I V G +F + + ++ K+ + G+ Sbjct: 181 SHPEISIKFLRDGK---RVLNTPGNGDRFSVIHAVFGREFASTLMPVDYKAGSFPVNGFA 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P +R N + + FINGR V+ K + + AY +I +G++P VL LE+ VDV Sbjct: 238 SVPMKSRANRSMQHFFINGRYVKSKTCCTALEEAYKGSIMVGKFPACVLNLELPFEMVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--------------------------- 330 NVHP+K +RF + + + +++ AI ++ Sbjct: 298 NVHPSKIEVRFTDERAVFEAVYFAVKSAIAQQSRLSAVPRETEIVKPHVERVLSQPQELD 357 Query: 331 ------------ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFL------- 371 IS S+ S+ S F+ K +P+ +S + +++ F Sbjct: 358 QMGLGVRPTPQPISVSAPPSQLRDSGFNYQVRKKEPVPQKESSFSFLKKESFAPAGNTAG 417 Query: 372 ---QENRLSTNDLLPSDDPTYSE-----DNDPVEESEATHYQLGIACAQIHQNYIISQTT 423 RL + + + S + E + ++ + YI+++ Sbjct: 418 QRSAPKRLEDRIIPETPEMPKSSEVVLTKEQSKHQPEKEARPVYRIIGELFKTYILAEVE 477 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 D LV+VD+HAAHER+++EK++ + + Q LL P + E I+ + E L RL Sbjct: 478 DQLVMVDKHAAHERILYEKLK--QEAGNLDRQVLLAPVSVTCSVEEHECILANAETLERL 535 Query: 484 GIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY 543 G AE FG +++ IREIP +L ++ + + DI++ ++ + + +E + +MAC Sbjct: 536 GFLAEDFGGSSVLIREIPMVLDREAVEDVFGDILNNLMKNKRDVS-PQVLEELYHSMACK 594 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +I++ E+ RL + + C HGRP I + E+ FGR Sbjct: 595 AAIKANDVNSPAELERLFERVYFDEAIRYCPHGRPVAITMTKERFERQFGR 645 >gi|126654327|ref|ZP_01726093.1| DNA mismatch repair protein [Bacillus sp. B14905] gi|126589230|gb|EAZ83394.1| DNA mismatch repair protein [Bacillus sp. B14905] Length = 614 Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 174/617 (28%), Positives = 288/617 (46%), Gaps = 35/617 (5%) Query: 7 SEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSE 66 E + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ + G + Q+ DNG GM E Sbjct: 2 DEWLSNKIAAGEVVERPASVVKELVENAIDAGSTSIDVFLLEAGLTSIQVIDNGSGMDEE 61 Query: 67 EIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAIS 124 + M+ RH TSKI D I T GFRGEAL SI +VS +TL++ +G + + Sbjct: 62 DAIMSFSRHATSKIHQEHDLFRIRTLGFRGEALASIASVSKMTLIT--SNGESGTHLELE 119 Query: 125 GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF 184 G + + +P + GT + V LFF PARL ++K+ Q E D++ R+A++ P+++F Sbjct: 120 GGHMLTHKPGPLRKGTDLTVSQLFFNTPARLKYMKTIQTELGHTIDLMNRLALSNPQIAF 179 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNR 244 + + G+ + ++ + G V +S++ + GY +P R Sbjct: 180 RLLHNGQI---LLQTNGRGDVQQVLAAIYGVHNAKKMVSFQGESHDYRISGYVTLPEVTR 236 Query: 245 GNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKS 304 + N +F+NGR V+ + I AY +P+ R+P+VVL +E DP DVNVHPAK Sbjct: 237 ASKNYMSLFVNGRWVKHYLVQKAIVDAYHTYLPIERFPIVVLYIEGDPFLTDVNVHPAKH 296 Query: 305 YIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY------ 358 IR + I +I++ I +K++ + P+ Sbjct: 297 QIRLSKELELLKLIEDTIRERIRSVIRVPQMEKKEKIVKPATEQLNIWKPAPQIDVEKMN 356 Query: 359 ---------ATSLTNTQEKLFLQENRLST-----------NDLLPSDDPTYSEDNDPVEE 398 T N +E E + + + + V E Sbjct: 357 AIVEKLYDVQTVQENNRETTVEPEPVSTIVEDYAQPIQPLQAEEIEEVTVVEQHEELVNE 416 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS-TKITSQTL 457 + + QIH YI++Q DG ++DQHAA ER+ +E R+ Q L Sbjct: 417 TAKEPFPELEVVGQIHGTYIVAQMEDGFYLIDQHAAQERIKYEFFREKVGQVNPHERQAL 476 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P E L+ EH +L +G+ E FG ++ +RE P+ K +++ D+I Sbjct: 477 LLPLTFHYAADEALLLREHKHELEAVGVFLEEFGQSSFVVREHPSWFPKGEEQEIIEDLI 536 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 ++++ + ++ E M+C SI++ + +M LLR++ K N C HGR Sbjct: 537 EQVLTTKKAD-VKKLREAAAIMMSCKKSIKANYYLTKEQMEILLRDLRKADNPFTCPHGR 595 Query: 578 PTFIKLKLSDIEKLFGR 594 P I ++EK+F R Sbjct: 596 PVLIHFTSYEVEKMFKR 612 >gi|325106151|ref|YP_004275805.1| DNA mismatch repair protein MutL [Pedobacter saltans DSM 12145] gi|324974999|gb|ADY53983.1| DNA mismatch repair protein MutL [Pedobacter saltans DSM 12145] Length = 625 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 186/623 (29%), Positives = 324/623 (52%), Gaps = 38/623 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ A+KELIENS+DA + +++ +I GK+ QI DNG G Sbjct: 5 IQLLPDSVANQIAAGEVVQRPASAVKELIENSIDAGADKIQLIIKDAGKTLIQIIDNGCG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + M ++RH TSKI +D I T GFRGEA+ SI A++ + + ++ ++ G Sbjct: 65 MSPTDARMCLERHATSKIRKAEDLFAIRTMGFRGEAMASIAAIAQMEIKTKRHEDELGNS 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G ++ + P A GT + V++LFF IPAR NFLKS VE I D +R+A+A+P Sbjct: 125 IIVEGSEVINQEPCAGANGTSISVKNLFFNIPARRNFLKSNAVEMRHIIDEFQRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++ FT Y + +RI ++G ++ V ++E ++ I L+G+ G P Sbjct: 185 EIHFTLHHDGQEVYHLP----QATLKQRIIHLLGNNYNERLVPVDEDTSIIQLKGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +F + + F+N R ++D ++ + AY E + +P+ VL ++IDP ++D+NVH Sbjct: 241 SFAKKTRGDQFFFVNKRFIKDPYLNHAVMAAYEELLTEDSFPLYVLFIDIDPSRIDINVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----------------KMIS 343 P K+ I++++ I I ++++++ K I+ + + Sbjct: 301 PTKTEIKYQDDKAIYAIIRSAVKRSLGKYNITPTLDFDQETGFERMITHKPLDEITPPQI 360 Query: 344 SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTN-------------DLLPSDDPTYS 390 SF+ + P + S ++ + + N S N + +P D + Sbjct: 361 SFNPNFNPFGNEVSTVKSKSDNFRAIAERTNSGSGNWSTLYNIVEQEKAEQIPLDLGVTT 420 Query: 391 EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 + E+S + QIHQ YIISQ G +++DQ AAHER+++EK + S Sbjct: 421 TVSLNQEDSVESPVADNRNLFQIHQKYIISQIKSGFMLIDQQAAHERILYEKFLEQLESH 480 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK-NI 509 K SQ L P+ I L + AL+ E H LG + FG N + I +PA + + N+ Sbjct: 481 KGLSQQSLFPQTITLNAMDFALVNELLPSFHALGFQIREFGKNTLVIEGVPADIPENHNL 540 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +++ +I+ ++ +T L D+ +N+ T+A SI++G ++ EMN L+ ++ Sbjct: 541 AEMMEKLIEGFKNNYSTLKL-DKRDNLARTLAKNASIKAGTVLKQEEMNNLIDQLFACNI 599 Query: 570 SSQCNHGRPTFIKLKLSDIEKLF 592 G+ IK+ L ++ + F Sbjct: 600 PGISISGKQIIIKITLDELAERF 622 >gi|332665286|ref|YP_004448074.1| DNA mismatch repair protein mutL [Haliscomenobacter hydrossis DSM 1100] gi|332334100|gb|AEE51201.1| DNA mismatch repair protein mutL [Haliscomenobacter hydrossis DSM 1100] Length = 634 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 181/635 (28%), Positives = 307/635 (48%), Gaps = 49/635 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + I NQIAAGE+I+RP+ +KEL+ENS+DA S ++ ++ G++ Q+ D+G G Sbjct: 5 IQLLPDSIANQIAAGEVIQRPASVVKELMENSVDAGSKNIKLIVKDAGRTLIQVIDDGCG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + M+ +RH TSKI DD I T GFRGEAL SI +V+ + L +R + G Sbjct: 65 MSETDARMSFERHATSKIRSADDLFAIRTMGFRGEALASIASVAQVELRTRRHASEVGTL 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G K+ S P GT V++LFF +PAR NFLK+ VE I D R+ +A Sbjct: 125 IQAEGSKVKSQEPCQTAAGTSFAVKNLFFNVPARRNFLKANTVEFRHILDEFERIVLANA 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F+ S + + GN +RI V G V + E+++ I ++G+ G P Sbjct: 185 DVFFSLHHNGSEVFHLPP----GNLRQRILGVFGNAVNTRLVPVVEETDIIQIKGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + Y F+N R ++ ++ + +AY E +P YP +L L+IDP ++DVNVH Sbjct: 241 EFAKKVRGEQYFFVNSRFIKSSYLHHAVMSAYEEVLPKEMYPFYLLFLDIDPARIDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------ISSFHQDNAPKTH 354 P K I+F + ++ N++ +++ + + G+ S ++ +SS + P T Sbjct: 301 PTKQEIKFEDDRLVYNYLKVAVRHGLGQHGVMPSLDFEQETSLQLPYLSSKMDQDKPFTT 360 Query: 355 LPKYATSLTNTQEKLFL-----------QENRLSTNDLLPSDDPTYSEDNDPVE------ 397 P+ +++ + + K F +EN L LL D SE + E Sbjct: 361 PPRNSSAWQSDEPKAFNSGKEDHAEQHREENNLRNWQLLYKDLGGASEGDGMGEGDDASG 420 Query: 398 -------------------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 +E + QIH YI+SQ G +++DQ AAHER+ Sbjct: 421 MQTMTIGSSWAQDEATTGPSTEEPFGKQQKVPYQIHGTYIVSQIKSGYMLIDQQAAHERI 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 ++E N + +Q L P ++ + ++ + D+ LG + FG N+ + Sbjct: 481 LYENYLSMMNENRAATQQQLFPITLNFSPNDAEILKDLLPDIQLLGFDVQEFGGNSFVVN 540 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 +P L+ K + + + + E L R E++ +MA +++ G+ + +EM Sbjct: 541 GLPVELAGKQNERSVMETLLEQHKIGLELQLNTR-ESLARSMARSAAVKRGQLLNEVEMQ 599 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 L+ ++ + G+ F+ +L D++K F Sbjct: 600 ALMDQLFACSMPYRSPFGKKCFVTYELEDLQKHFE 634 >gi|58584653|ref|YP_198226.1| DNA mismatch repair ATPase MutL [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|81311642|sp|Q5GSP0|MUTL_WOLTR RecName: Full=DNA mismatch repair protein mutL gi|58418969|gb|AAW70984.1| DNA mismatch repair enzyme MutL, predicted ATPase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 628 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 224/634 (35%), Positives = 347/634 (54%), Gaps = 47/634 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L K IN+IAAGE+IERP+ +KEL+EN++DA SS +E I GG + ITD+G Sbjct: 1 MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSSEIEIKIESGGCNLITITDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ +A RH TSK+SD + I GFRGEAL SI AVS + L S+ + Sbjct: 61 GGIEKSDLELAFMRHATSKLSDSELIEIKHLGFRGEALSSIAAVSRIKLSSKANGASEAW 120 Query: 120 QIAISG-EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I+ G EKI + P ++ GT +EVRDLFF P RL FLK+E+ E I D++ +A+ Sbjct: 121 SISYEGGEKIGELIPYSLPQGTHIEVRDLFFATPNRLKFLKTERAEIQSIVDIVNNLAMI 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + FT ++ K + + R+ +V E+F +N++E+NE+ + + L G+ Sbjct: 181 NYSIGFTLTSGSKKPLKY---AKQTSLFSRLCEV-EEEFQDNSLEINEEEDGVRLTGHIC 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 PT NRG ++ Y F+NGR ++D ++S IR AY + IP RYP L LEI Q+DVN Sbjct: 237 KPTVNRGKSDMIYTFVNGRPIKDNLLVSAIRYAYHDFIPSNRYPFATLHLEIPYDQIDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------ISSFH 346 VHP KS +RF+N +I + + + KA++ + +++ + Sbjct: 297 VHPNKSEVRFQNKRLIYEIVRRGLIKALSTRTGNSAVSNIDRSRCQGIGKETSGLPFDVS 356 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH--- 403 + H+ + T ++ +L+ + N L+ + D E S Sbjct: 357 ESQGNDNHINNGKSRETKSERELYERRPNPFENRLMKESNSPSVGKKDLSERSVLFDSGI 416 Query: 404 ----------------------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 + LG A Q++ YII++ L+IVDQHAAHERL++E Sbjct: 417 QKSLSQAKTVVLEREQIDLIENHPLGFARCQVYNTYIIAEARGKLIIVDQHAAHERLVYE 476 Query: 442 KMRQDFNSTKITSQTLLTPEIIDL-LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 ++ + I Q LL E++++ + ++ + + L +G + N + ++EI Sbjct: 477 CLK---QKSSIKRQKLLLSEVVEIKNQAGMEMVEVYKDKLFEMGFDIQINSENKVIVKEI 533 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 PAIL ++ ++L DI+D +++ ++D++ ILAT+AC+GSIR+GR M+ EMN L Sbjct: 534 PAILGTIDVKEMLIDIVDRLMEIEDMLPIEDKVNKILATIACHGSIRAGRTMKLEEMNVL 593 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LR+ME+ P S QCNHGRPT I++KLSDIEKLF R Sbjct: 594 LRQMEETPYSGQCNHGRPTHIEMKLSDIEKLFER 627 >gi|299138191|ref|ZP_07031371.1| DNA mismatch repair protein MutL [Acidobacterium sp. MP5ACTX8] gi|298600121|gb|EFI56279.1| DNA mismatch repair protein MutL [Acidobacterium sp. MP5ACTX8] Length = 654 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 192/656 (29%), Positives = 314/656 (47%), Gaps = 68/656 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR LS+++ NQIAAGE++ERP+ +KEL+ENSLDA ++R+ I GG+ +I DNG Sbjct: 3 KIRVLSDQVANQIAAGEVVERPASVVKELLENSLDAGATRIRLEIEAGGRKLIRIVDNGH 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A +RH TSK+ SDD +I T GFRGEALPSI +V+ ++L +R ++ G Sbjct: 63 GMGRDDALLAFERHATSKLRSSDDLLSIATLGFRGEALPSIASVARVSLETRAVEDEVGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I+G + V + GT + VRDLFF PAR FL+SEQ E + ++ A+A+ Sbjct: 123 MLEIAGGNLLRVEDAGLPAGTTIAVRDLFFNTPARRKFLRSEQTELGHVAALVTHYALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE---------------- 223 P F S+ + N ER+ Q+ G + + + Sbjct: 183 PDKHFEL---HSSTQSLLVAPAVANAGERLYQIFGRETFESLIPVAAELDFSRAGLPEPP 239 Query: 224 --------LNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + I L G+ P + N N YVF+NGR ++D+ IL AY Sbjct: 240 PWKRGEDYEAPEPGFIRLTGFVSKPELQKLNRNSIYVFVNGRLIRDRLILHAFTEAYRNI 299 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS 335 IP YPVV+L LE+ P++VDVNVHPAK+ +RFR + + +F+ +++ A + ++ Sbjct: 300 IPPTSYPVVLLFLEMPPQEVDVNVHPAKTEVRFRQGSFVHDFVRDAVRTA--QMNARPAA 357 Query: 336 VLSKKMISSFH------------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLL- 382 + S+ P P + F++ ++ DLL Sbjct: 358 SFFAALNSAPSLASSLLVDVSPLPGVDPAVFAPNGGLQALVAGSESFIEPQDTASFDLLA 417 Query: 383 ------------------------PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 + Q+ ++I Sbjct: 418 PVVPASPGRLSFEGSGMSVGYDEPAQSGIVEGAGGTSEHQPTLNSLATLKPLGQLRDSFI 477 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 ++ +GL IVDQH AHER++FEK+ ++ ++ Q LL P +++LL + E Sbjct: 478 LATNEEGLWIVDQHVAHERILFEKILRERKVEQVQRQRLLMPVLVELLPEQMVTFAAIAE 537 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +L R G +AE FGP +A++ P L + + ++L +++ + R I A Sbjct: 538 ELERNGFEAEPFGPRTLAVKATPVGLEGRELERMLEEVLAVTEREQQVENEEARRTRIAA 597 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++AC+ +I+ ++ +++ LL E+ K + + C HGRP ++ L DI++ F R Sbjct: 598 SIACHAAIKINMPLEPAKIDWLLTELGKTEHPTSCPHGRPIALRYSLKDIQRAFQR 653 >gi|167630633|ref|YP_001681132.1| DNA mismatch repair protein mutl [Heliobacterium modesticaldum Ice1] gi|238687867|sp|B0TB10|MUTL_HELMI RecName: Full=DNA mismatch repair protein mutL gi|167593373|gb|ABZ85121.1| DNA mismatch repair protein mutl [Heliobacterium modesticaldum Ice1] Length = 660 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 192/665 (28%), Positives = 304/665 (45%), Gaps = 82/665 (12%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L +NQIAAGE++ERP+ +KEL+EN+LDA ++R++ +A GGK +I DNG G Sbjct: 4 IQRLDTHTVNQIAAGEVVERPASIVKELLENALDAGATRIDITLAEGGKKLIRIIDNGCG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M +++ + V+RH TSKI +D + T GFRGEALPSI AVS L + +R +N + Sbjct: 64 MAADDAELCVERHATSKIRRAEDLMAVQTLGFRGEALPSIAAVSRLVITTRRSIDNQATR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I G + + V PGT V+V DLFF PAR FL+S E + +VI R+A AYP Sbjct: 124 VRIDGGERYPIEAVGAPPGTTVQVEDLFFNTPARRKFLRSATAEGSACAEVIWRLAAAYP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE-LNEKSNEITLQGYTGI 239 V+F+ + K ++ N E +S V G + I+ + + TL+G+ G Sbjct: 184 HVAFSLTQGKQISFR---SPGNNKPLETLSAVFGREIISFLLPLSAVAPDGWTLRGFIGS 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ +R N N F+N R V+ + + + AY +P GR+P VL LE+ P+ +DVN Sbjct: 241 PSLHRNNRNHQNWFVNQRWVRCRILSQAVEEAYHGMLPGGRFPFFVLHLELPPQTIDVNS 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL---- 355 HP K I+F + +F Q++ + + + +S ++SF D AP T Sbjct: 301 HPTKQEIKFDRERDVADFTRQTVLQTLRSRPLSRPL----WSLASFQSDGAPPTQQLSSD 356 Query: 356 ---------------------------------PKYATSLTNTQEKLFLQENRLSTNDLL 382 P+ + + F Q L Sbjct: 357 VREKAEGERWRQDRILLYREGALSPTKQELPKSPERSERVERLNSGDFGQGRALYRESSQ 416 Query: 383 PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN----YIISQTTDGLVIVD-------- 430 E + E + Q +H+ Q +GLV D Sbjct: 417 ELPTDCLRESLEETESQSESIRQCLSENLPLHRQEPRAEKECQPVEGLVAGDVAEWIPIG 476 Query: 431 -------------------QHAAHERLIFEKMRQDF--NSTKITSQTLLTPEIIDLLEGE 469 QHAAHER+++ +++ + + SQ LL P + L E Sbjct: 477 QFRRSYILAEGGDTLYLVDQHAAHERVLYHGLKERYLNEAGVCASQQLLLPVTVTLTPAE 536 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 ME +L G+ E FG N + IR +P L RDI++ ++ Sbjct: 537 FQGAMEAIAELRDAGLIVEHFGGNTLLIRAVPVGLPPGEEKGFFRDILNSLM--KGLRDR 594 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 + L++MAC G++++G+ M EM LL+++ + C HGRP +++ ++E Sbjct: 595 EVIRRAALSSMACRGAVKAGQVMSHAEMGALLQQLARLEGVDTCPHGRPYLLRIDRRELE 654 Query: 590 KLFGR 594 + F R Sbjct: 655 RRFYR 659 >gi|116626082|ref|YP_828238.1| DNA mismatch repair protein MutL [Candidatus Solibacter usitatus Ellin6076] gi|122251851|sp|Q01QW7|MUTL_SOLUE RecName: Full=DNA mismatch repair protein mutL gi|116229244|gb|ABJ87953.1| DNA mismatch repair protein MutL [Candidatus Solibacter usitatus Ellin6076] Length = 660 Score = 481 bits (1239), Expect = e-133, Method: Composition-based stats. Identities = 196/662 (29%), Positives = 321/662 (48%), Gaps = 74/662 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L +++ N+IAAGE++ERP+ +KEL+ENSLDA ++ V + GG+ +I D+GF Sbjct: 3 RIRILPDQVANKIAAGEVVERPASVVKELLENSLDAGATEVRVEVEAGGRRLIRIVDDGF 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A +RH TSK+ D D +I T GFRGEALPSI +VS L L +R + TG Sbjct: 63 GMLRDDALLAFERHATSKLRDVKDLLSIATLGFRGEALPSIASVSRLLLETRSMEEPTGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I+G K+ A+ GT++ VRDLF+ +PAR FL++E E I ++ ++A+ Sbjct: 123 RIEIAGGKMLRCEEAALGGGTVITVRDLFYNVPARRKFLRTEPTELAHIASLVTHYSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE---------------- 223 P SF ST ++ + + ER+ QV G ++ VE Sbjct: 183 PDKSFRLSTGP---TELLGVTPVASMKERVYQVFGSQILDELVEIGVRERDLFLPPPSVP 239 Query: 224 -------------LNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRT 270 + L G+ P + N N Y+F+NGR ++D+ +L + + Sbjct: 240 PSQAIAEYRSTEPEDPPFRRFRLTGFFSRPQIQKSNRNSIYIFVNGRLIRDRLVLHALSS 299 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 AY +P YP +L LE D +VDVNVHP+K+ +RFR+ + + +FI SI++ + Sbjct: 300 AYHNLMPASAYPFALLFLECDAEEVDVNVHPSKTEVRFRHGSFLHDFIRDSIRERL--ME 357 Query: 331 ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQ-------EKLFLQENRLSTNDLLP 383 + S +++ + +++ L N Q E E + +L Sbjct: 358 SRPAPTFSPVPMAAPPAQQGAQLPYSEFSQMLENEQQAASEMAEPAIAGEPAMPEFNLRA 417 Query: 384 SDDPTYSEDND-------------------------------PVEESEATHYQLGIACAQ 412 + PT D P E + Q Sbjct: 418 TAPPTPRLDFSAPPIEVAPGPPPSGKLSRRLDMHGEFPLEAIPAPEMSLSALSDLRPLGQ 477 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 IH+++II+ DGL I+DQH AHER++FE++ + + ++ +Q LL P I+ L + Sbjct: 478 IHESFIIAAGRDGLWIIDQHVAHERILFEQVLKQRAAGRVETQRLLMPMILQLSAEQQID 537 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 ++LH G + E FG IA++ PA + +++ ++L +I++ + T +L D Sbjct: 538 YARIADELHASGFETEPFGNRTIAVKAAPAAVGPQDLERILFEILEIAENEMRTNSLDDL 597 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 NI A++AC +I+ ++ +M LLR + C HGRP + +I K F Sbjct: 598 RRNICASIACRAAIKINMRLDLAKMEWLLRALAATDCPMSCPHGRPIAMHYSTREILKAF 657 Query: 593 GR 594 R Sbjct: 658 HR 659 >gi|218961589|ref|YP_001741364.1| DNA mismatch repair protein MutL [Candidatus Cloacamonas acidaminovorans] gi|167730246|emb|CAO81158.1| DNA mismatch repair protein MutL [Candidatus Cloacamonas acidaminovorans] Length = 630 Score = 481 bits (1239), Expect = e-133, Method: Composition-based stats. Identities = 194/633 (30%), Positives = 306/633 (48%), Gaps = 44/633 (6%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I L+E + N+IAAGE+IERP+ +KEL+EN++DA + + I GGK ++ DN Sbjct: 1 MPNIHILAEDVRNKIAAGEVIERPASVVKELVENAIDAGADSIIVAIENGGKDLIRVIDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM +++ +A +RH TSKI +D ++I + GFRGEALPSI +VS L L++R + Sbjct: 61 GCGMNADDAMLAFERHSTSKIKTVEDITHIGSLGFRGEALPSIASVSKLHLVTRTAEEEM 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + + K+++V + N GT V VR LF +PAR FLK+ VE I I A+ Sbjct: 121 ATIVEYANGKLNNVTKTSANIGTAVTVRGLFKDLPARRKFLKTAPVEARHIIKYIHYQAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGE-DFINNAVELNEKSNEITLQGY 236 YP++SF + +RI +V G F ++ + + K N+ ++ GY Sbjct: 181 VYPQISFRLVIDDKEKLNYIACP---ERKQRIEEVFGSGFFADDVIPVEGKYNDYSVSGY 237 Query: 237 T-GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI------PLGRYPVVVLLLE 289 G+ + Y FINGR + DK + +I+ AY I G P +L LE Sbjct: 238 IFGLEDRADKLIDAQYTFINGRYIFDKTVRHSIKAAYEPFILKTRAWQKGTTPPYILFLE 297 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I P Q+DVNVHPAK +RFR ++ + +++++ KA+ + K + Sbjct: 298 IPPEQIDVNVHPAKLEVRFRENNLVHSLVLETLTKALRNYEDQKFASARSKFQGGGKGEK 357 Query: 350 APKTHLPKYATSLTNTQEKLFLQE---------NRLSTNDLLPSDDPTYSEDNDPVEESE 400 + ++ + + +E R + P D P ++ + E E Sbjct: 358 VTSLERDIFVKNIEVPRFSAYKKEFGNLFQDDLFRSEQSSTSPKDMPIFNPAQEENAEQE 417 Query: 401 ATHYQLGIAC---------------AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 Q Q H YI Q DGLVI+DQHAAHER+I+EK+ Q Sbjct: 418 IFPDQPNDQLKYDILLKNEEDYINPWQFHNTYIFIQVEDGLVIIDQHAAHERIIYEKLIQ 477 Query: 446 DFNSTKITSQTLLTPEIIDLLE----GECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 Q L+ P +ID+ L+ E+ E L ++G ++F N++ I EIP Sbjct: 478 RSEGAPAVRQKLIIPLVIDIPPYISTEIKDLVEENMELLEKVGFTLKQFSGNSLVIEEIP 537 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 A L+ Q+ +I+ ++ T D E + ++AC +I++ K+ EM L+ Sbjct: 538 AELTDFASGQVFIEILKQLEQEMEITT--DFRECLAKSIACKSAIKANHKLTRKEMLNLI 595 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ C HGRP +K+ ++D EK F R Sbjct: 596 NQLFACQTPYFCPHGRPLMLKIPVTDFEKKFKR 628 >gi|296135717|ref|YP_003642959.1| DNA mismatch repair protein MutL [Thiomonas intermedia K12] gi|295795839|gb|ADG30629.1| DNA mismatch repair protein MutL [Thiomonas intermedia K12] Length = 613 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 193/607 (31%), Positives = 336/607 (55%), Gaps = 16/607 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L + +I+QIAAGE+IERP+ A++EL++N++D+ +S + + GG Q+ D+G Sbjct: 7 PIRPLPDVLISQIAAGEVIERPASALRELLDNAIDSGASALTVRLEQGGLGSVQVEDDGC 66 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +EE+P+A+ RH TSKI+D + + GFRGEAL ++ AV+ + ++SR + GA Sbjct: 67 GIPAEELPLALLRHATSKIADLDELHHAAHLGFRGEALAAMAAVAEIEIISRRAGAD-GA 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I S ++S+V+P A GT V +R LFF +PAR FLKS Q E DV +R AIA+ Sbjct: 126 RIHASAGQVSAVQPTAAQQGTRVTLRQLFFNLPARRKFLKSPQTEYAWCADVFKRTAIAH 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++ + + + +R++ V+GE F +A+ ++ + + ++G Sbjct: 186 PQIALRLWHDGQLKLQFERDPSPHGL-DRLAAVLGEAFSAHALSVSAQIGPLAVRGLICK 244 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT R A+ ++ +N R V+D+ + +R AYA+ + P LLL++ VDVNV Sbjct: 245 PTAARARADVQHIIVNNRWVRDRTVAHGVRAAYADVLHGALQPQYALLLDLPSELVDVNV 304 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN---------A 350 HPAKS +RFR+ + + + ++++ + + G SS +++ + A Sbjct: 305 HPAKSEVRFRDSSAVHQAVRHAVEQVLARAGGEASSSHPSAPPAAWARPPSALPTTAALA 364 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND--PVEESEATHYQLGI 408 P + + + + L D + ++ + LG Sbjct: 365 FGVARPSPSPIPWDALSRAYAPLATADAAPLQAQDSAAPRPYAQATDLAAAQPDDFPLGF 424 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-KITSQTLLTPEIIDLLE 467 A AQ+ YI++Q GLVIVD HAAHER+++E+++ + + Q LL P + Sbjct: 425 ALAQLLGIYILAQNRHGLVIVDMHAAHERIVYERLKAAEQADAPVAVQPLLIPAAFAASD 484 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 E +H + L LG++ +R GP+++ +R P +L+ + +L R ++ ++I T+ Sbjct: 485 AEMGAAEDHADALRSLGVELDRAGPSSLVVRATPTLLAHADPIRLARGLLADLISQGTSS 544 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 LQ+R +L++MAC+G++R+ R++ EMN LLR+ME+ + QCNHGRPT+ ++ L+D Sbjct: 545 RLQERRNALLSSMACHGAVRANRQLTLAEMNALLRDMERTERADQCNHGRPTWRQIGLAD 604 Query: 588 IEKLFGR 594 ++ LF R Sbjct: 605 LDALFLR 611 >gi|298207994|ref|YP_003716173.1| putative DNA mismatch repair protein [Croceibacter atlanticus HTCC2559] gi|83850635|gb|EAP88503.1| putative DNA mismatch repair protein [Croceibacter atlanticus HTCC2559] Length = 617 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 161/617 (26%), Positives = 303/617 (49%), Gaps = 32/617 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KEL+EN+LDA S ++ ++ GK Q+ D+G G Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENALDAGSESIQLIVKEAGKILIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI ++D I+T GFRGEAL SI AVSH+ + ++ Q+ G Sbjct: 65 MSVTDARLSFERHATSKIKSAEDLFAINTKGFRGEALASIAAVSHVEMKTKQTQDEVGTY 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G +I++ GT + V++LF+ IPAR NFLKS+ VE I D +R+A+A+P Sbjct: 125 IKIEGSEITTQDVCVTPKGTSISVKNLFYNIPARRNFLKSDAVEMRHIIDEFQRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+F S+ + + N+ +RI ++G V + E+++ + + G+ G P Sbjct: 185 SVAFDLHHNGSSLFSLPS----SNYRQRIVNILGTKTNERLVPVEEETDIVKISGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + F+N R ++ ++ +I +A+ + +P L L++DP+ +D+N+H Sbjct: 241 EFAKRTRGEQFFFVNNRYIKSSYLHHSIVSAFEGLLRDKSHPSYFLYLDVDPKTIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK--------------------- 339 P K+ I+F + + + ++ ++ + ++ + Sbjct: 301 PTKTEIKFEDEHTLYAMLKSVVKHSLGQFSVAPVLDFDRDSDLDTPYSYKEKHVSIPKID 360 Query: 340 --KMISSFH--QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 + + F Q + T + E L++ N + D + + D Sbjct: 361 VDRNFNPFQDSQPATASKQSRNFQQKPTQSWESLYVGANTEAIEDNFQTSAIEFESDEVT 420 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 E + QIH+ YI+S GL++VDQH AH R+++E++ ++ + SQ Sbjct: 421 GNLFENETEEHQANSFQIHRKYIVSTIKSGLLVVDQHRAHTRVLYEELLKNITMSSAVSQ 480 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P + E +L+ E + L + G E + + + IP I+++ NI LL+ Sbjct: 481 QLLFPIELQFNANELSLLNELKDSLVQTGFVFEGSQEHTLVVSGIPTIINESNIQDLLQR 540 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 ++ ++ + + + + +MA ++++G + LL ++ S Sbjct: 541 LLSDL-EQEVPGNQFSQNDTLAKSMAKSMAVKAGTVLNVEAQQHLLNQLFACKEPSVTPQ 599 Query: 576 GRPTFIKLKLSDIEKLF 592 R F+ L +D++ F Sbjct: 600 NRKVFVTLTSNDLDNKF 616 >gi|302380626|ref|ZP_07269091.1| DNA mismatch repair protein, C-terminal domain protein [Finegoldia magna ACS-171-V-Col3] gi|302311569|gb|EFK93585.1| DNA mismatch repair protein, C-terminal domain protein [Finegoldia magna ACS-171-V-Col3] Length = 627 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 186/629 (29%), Positives = 301/629 (47%), Gaps = 42/629 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LSE I +IAAGE+IERP IKEL+ENS+DA S + I GGK + ++DNG G Sbjct: 2 IKLLSEDTIQKIAAGEVIERPVSVIKELVENSIDAGSDAIIVEIKNGGKDYISVSDNGSG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + EI +A +RH TSK+ DD +I T GFRGEAL SI AVS LT+ +R G + Sbjct: 62 IEKNEIELAFKRHSTSKLEKFDDLYDIRTLGFRGEALASILAVSKLTVSTRTKSEKIGKK 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + K+ + VAMN GT + ++DLF+ +P R F+KS+Q E NLIT + + AI Sbjct: 122 VEFRNSKVINESDVAMNVGTKIVIKDLFYNVPVRKKFMKSDQTEANLITTTMYKFAICNT 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 VS + ++ N + E I + G NN ++++ S++ + GY Sbjct: 182 DVSIKYIKDNKTLFETK---KNSSIKENIINLFGTSMSNNLIDIDISSHDYKIHGYISNN 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N Y+F+NGR ++ + I + + + Y IP GR+P+ L EI+P+ VDVNVH Sbjct: 239 NLYRANRKMQYIFLNGRFIKSEDIRNNVESNYKSVIPNGRFPLFWLFFEINPKLVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAI-------NKKGISTSSVLSKKMISSFHQDNAPKT 353 P K ++ I + + ++ + N K + ++ + ++ T Sbjct: 299 PNKQKVKISILDEILEQLNKKVRFLLENNVRITNISQSIPDDDKYKDLRRNYFESDSNLT 358 Query: 354 HLPKYATSLTNTQEKLFLQENRLS--------------------------TNDLLPSDDP 387 + S LF ++LS D+ D+ Sbjct: 359 NYKYDKVSEPTYSYNLFNDNSKLSNLRNIRYKDESEAFNKKPETNKYFFKEKDIAKQDNF 418 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIIS--QTTDGLVIVDQHAAHERLIFEKMRQ 445 E ES Y+ + + YI++ + + + DQHA HER+ +EK+ + Sbjct: 419 FLDEIEQIKVESSLKKYEKFDILTVLFKTYILAKDEYDSKIYLFDQHACHERINYEKLTK 478 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 ++ SQ L P I L + + + LG +++ F +++ +R +P + Sbjct: 479 QMLDKEVVSQNLAFPINISLTDELMEIYTNNKSIFEELGYESDVFSDDSVVVRAVPYLFG 538 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 N L DI+D I + D IE+ + +C S+++G + + E+ +LL ++ Sbjct: 539 NSNAEFLFTDILDTIA--KNSNDPFDVIESKVIKRSCKMSVKAGDTLSNFEIIKLLEDLF 596 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 K C HGRPTFI++ D+EK+F R Sbjct: 597 KCEYPLTCPHGRPTFIEMNEKDLEKMFMR 625 >gi|198283707|ref|YP_002220028.1| DNA mismatch repair protein MutL [Acidithiobacillus ferrooxidans ATCC 53993] gi|218668138|ref|YP_002426336.1| mismatch repair protein MutL [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248228|gb|ACH83821.1| DNA mismatch repair protein MutL [Acidithiobacillus ferrooxidans ATCC 53993] gi|218520351|gb|ACK80937.1| mismatch repair protein MutL [Acidithiobacillus ferrooxidans ATCC 23270] Length = 595 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 197/598 (32%), Positives = 333/598 (55%), Gaps = 17/598 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++ +L+ + NQIAAGE++ERP+ +KEL+ENSLDAE++R+ + GGG + D+G Sbjct: 8 RVHRLNATLANQIAAGEVVERPASILKELLENSLDAEATRITIHLEGGGMDLLSVEDDGV 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++P+A++RH TSK++ +D I T GFRGEALP+I +VS L L+SR N Sbjct: 68 GILAEDLPLALERHATSKVATWEDLQAIQTMGFRGEALPAIASVSRLELLSRARSQNQAV 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ++G ++ P A PGT V V DLFF +PAR FL+S E + V+R++A+A Sbjct: 128 RLQVTGGTAAAPEPAARAPGTTVRVADLFFNVPARRKFLRSPATELSRNQRVLRQIALAN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V+F + + + + R++ ++GE F+ NA+ + ++ ++L G+ G+ Sbjct: 188 FPVAFQLIQNGRSLVQFPTATDAESRAARVAAIMGEGFLANALYIEQEDQGLSLSGWLGL 247 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT+NR ++ Y ++NGR V+D + +R AY + + R+P+ L L++ P +VDVNV Sbjct: 248 PTYNRARGDEQYFYVNGRPVRDPVVTHALRAAYNDVLFQDRHPLYALYLKLPPGRVDVNV 307 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ +RFR+ I +F+ ++++ I ++G + V + T A Sbjct: 308 HPAKAEVRFRDGREIHDFLFHTLRRVIAEQGGAQPRVTV-----PVQPFSQGPTATKSPA 362 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE---ATHYQLGIACAQIHQN 416 T +QE+ + + L + T D A +Y LG A QIH Sbjct: 363 YVPTQRSLSAAVQESAGAYWEHLVAPVMTSVPPPDLPAAPTHELAPNYPLGQAIGQIHAR 422 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 +I++Q ++G++++DQHAAHER+++EKM+ S + Q + PE + + + A + Sbjct: 423 FILAQNSEGMILIDQHAAHERILYEKMKNM--SQQNEKQVFIIPEYVHVTAAQMAHFGKR 480 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 DL G+ GP +AI P ++ Q++ D++ E + + + Sbjct: 481 QPDLQAAGLDISVAGPGTLAIHAAPKAIAAATYGQIVADLLAEEPAWAEGDG-----DAV 535 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LA MAC +I++ ++ EMN LLR++E P QCNHGRPT + L+D+++LF R Sbjct: 536 LADMACRAAIKTNHRLSLEEMNSLLRQLEATPRFGQCNHGRPTVVYFSLADLDRLFLR 593 >gi|330507604|ref|YP_004384032.1| DNA mismatch repair protein MutL [Methanosaeta concilii GP-6] gi|328928412|gb|AEB68214.1| DNA mismatch repair protein MutL [Methanosaeta concilii GP-6] Length = 571 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 181/596 (30%), Positives = 303/596 (50%), Gaps = 31/596 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E+ +N+IAAGE+IERP+ +KEL+ENS+DA + +V + GGKSF ++TD+G Sbjct: 3 RIRALDEETVNKIAAGEVIERPASVVKELVENSIDAGAHKVLIEVRDGGKSFIKVTDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTG 118 G+ +++P+A Q+H TSKIS D I T GFRGEAL SI +VS + + ++ +G Sbjct: 63 GIDPDDLPLAFQKHTTSKISGAQDLETIGTLGFRGEALASIASVSEAVEVRTKTRDALSG 122 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + I K++ + V GT + V +LF +PAR LK + + I DVI +AI Sbjct: 123 SYLRIENGKVAETKEVGSPVGTSIVVWNLFSNVPARRKHLKGREAKLVHIIDVITELAII 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + ++F + +K ++ + +S++ G + L ++G G Sbjct: 183 HYDIAFELFSGSRTHFKSARSNSWDDI---LSRIFGLKAVAGMAPLQASGRGWRIEGMIG 239 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 R + ++ ++F+NGR V + + +R AY IP G+ P+ VL LEI P VDVN Sbjct: 240 DAFNLRASPDRIFIFVNGRAVSSRPMAGALREAYRNIIPPGKSPIAVLSLEISPDLVDVN 299 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK IR + I + + Q ++ S +S + Sbjct: 300 VHPAKREIRLLHENEICSAVTQEAALTLSSYAKSVASE--------------------RL 339 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 S T + L +N + + L ++ T + E QI + YI Sbjct: 340 KPSDQITASEETLAQNAMQSTLPLDVEEDTALDQ----ALPEREKRSSLKILGQIKRLYI 395 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 ++++ GLV++DQHAA ER+ FE + + + + Q L P I+L+ E ++ E Sbjct: 396 VAESDQGLVLIDQHAAAERIRFEGLEERYRE-GLIRQELACPVTIELMASEEIMLSSWKE 454 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L +G + FG + ++R +PA+ + + + D++ E+ R + +L Sbjct: 455 VLDDIGFEISSFGGRSYSVRSVPALGQRTESAESVHDVLKELFLRGKPGPDSSRRDEVLK 514 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC GSI+SG+++ EM +LL ++++ N + C HGRP + L S +E+LFGR Sbjct: 515 LLACRGSIKSGKELTLKEMEQLLHDLQECSNPTTCPHGRPVMVILDQSQLERLFGR 570 >gi|317129121|ref|YP_004095403.1| DNA mismatch repair protein MutL [Bacillus cellulosilyticus DSM 2522] gi|315474069|gb|ADU30672.1| DNA mismatch repair protein MutL [Bacillus cellulosilyticus DSM 2522] Length = 626 Score = 481 bits (1238), Expect = e-133, Method: Composition-based stats. Identities = 176/634 (27%), Positives = 291/634 (45%), Gaps = 53/634 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L + N+IAAGE++ERP+ IKELIEN+LDA SS+++ + GG S + Sbjct: 3 KIIQLDNALANKIAAGEVVERPASVIKELIENALDANSSQIKIEVEEGGLSLIR------ 56 Query: 62 GM-------TSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRP 112 M E++ +A RH TSK+ +D I T GFRGEALPSI +VS+L L + Sbjct: 57 -MIDDGDGMDEEDVDLAFHRHATSKLRNDQDLFRIATLGFRGEALPSIASVSNLLLKT-S 114 Query: 113 PQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 G +I ++G K++ A GT + V DLF+ PARL +LK+ E I+DV+ Sbjct: 115 NGELQGHEIRLAGGKVTYKGSTASRKGTEIVVTDLFYNTPARLKYLKTVHTELGHISDVV 174 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 RMA+A+P V F + + S NG+ + I+ + G N + + + + + Sbjct: 175 NRMALAHPNVGFHLTHNGKI---LLQTSGNGDLLKVINDIYGSSVAKNMLHIEAEDLDFS 231 Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 ++GY G P R N + INGR +++ I I+ Y +P+G++P+VV +E+DP Sbjct: 232 IKGYVGKPEVTRSNRSYMSTIINGRYIRNYAINRAIQEGYHTLLPIGKFPIVVFHIEMDP 291 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK 352 +DVNVHPAK +R ++ I +++K + S + + + Sbjct: 292 ILIDVNVHPAKLEVRLSKEQALQELITNTLKKLFQQTRFIPEVKQSSQKVERSKSEQMAF 351 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE--------------- 397 + ++ + +++R+ + + + +E ++ E Sbjct: 352 SLSHDMVPKQSSENKGEGKEQHRIESTEDTLNKQSQVNESDNTEEIAKNYIIRSDVQDDE 411 Query: 398 -----------------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 + Q+H YI++Q GL I+DQHAA ER+ + Sbjct: 412 VTLFSEEKKETLSVDPKTTPDNKVPPLYPIGQLHGTYILAQNDQGLFIIDQHAAQERIKY 471 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 E R+ T Q LL P + + E + E R+GI E FG +R Sbjct: 472 EYYREKLAKFDNTLQDLLVPLSFEFTQAEEERLKEKGHLFERIGIHLEPFGTRTYIVRSH 531 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 P K L+ ++++++ D T + E M+C +I++ R + EM +L Sbjct: 532 PTWFPKGEEEALISEMLEQLKDMKTID-IGKIREEAAILMSCKAAIKANRFLTHDEMFQL 590 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L + C HGRP I ++E++F R Sbjct: 591 LETLRTCVEPYTCPHGRPVIIHYSTYEMERMFKR 624 >gi|326798889|ref|YP_004316708.1| DNA mismatch repair protein mutL [Sphingobacterium sp. 21] gi|326549653|gb|ADZ78038.1| DNA mismatch repair protein mutL [Sphingobacterium sp. 21] Length = 620 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 176/619 (28%), Positives = 303/619 (48%), Gaps = 32/619 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ A+KELIEN++DA + +++ ++ GKS Q+ DNG G Sbjct: 5 IQLLPDAVANQIAAGEVVQRPASAVKELIENAIDAGADKIQLIVKDAGKSLIQVIDNGCG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + + +RH TSK+ +D I T GFRGEA+ SI A++H+ L +R ++ G Sbjct: 65 MSVTDARLCFERHATSKLRKAEDLFAIRTMGFRGEAMASIAAIAHVELKTRRHEDELGTC 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G +I + P A GT + V++LFF PAR NFLKS VE I + +R+A+A+P Sbjct: 125 IMIEGSEIINQEPTATPAGTSICVKNLFFNTPARRNFLKSNPVEMRHIIEEFQRIALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 K+ F+ + + + + +RI + G ++ V + E + I L G+ G P Sbjct: 185 KIFFSLHSDGNEVFHLPS----EGLKQRIIHIFGSNYNQRLVPVEESTTIINLNGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + + Y F+N R ++D ++ + AY E +P YP+ VL +EIDP Q+DVNVH Sbjct: 241 EYAKKTRGEQYFFVNNRFIKDPYLNHAVLNAYEEILPSESYPLYVLFIEIDPAQIDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----------------KMIS 343 P K+ I++++ I I ++++++ K I+ + ++ Sbjct: 301 PTKTEIKYQDERSIYAIIRSAVKRSLGKYNITPTLDFNQETGFSHMISHKKTEDIVPPTI 360 Query: 344 SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA-- 401 SF+ P + N + + L ++ + Sbjct: 361 SFNPQFNPFDTGSQQKERQDNYSRSFEKKSGIPQNWETLYEITQKAHHQQLSIDSEDKQQ 420 Query: 402 -------THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 G QIH +I+SQ G +++DQ AAHER++FE+ Q + + S Sbjct: 421 ESAIEKTQEKPAGKLIFQIHNRFILSQIRSGFILIDQQAAHERILFERFLQQLETHQGAS 480 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q L P+ +DL + LI + D+H LG + FG N + IPA L + Sbjct: 481 QQSLFPQTVDLSVADFELITDLLPDIHALGFQIRAFGRNTFIVEGIPADLGSGLSESQVL 540 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 + + E ++ + + EN+ ++A +I+SG + EMN ++ ++ + Sbjct: 541 EQLLEAYKNNQSTLKLTKRENLARSLARNAAIKSGTALNIDEMNDIIDKLFACSTPNVSL 600 Query: 575 HGRPTFIKLKLSDIEKLFG 593 G+P I L ++ + F Sbjct: 601 SGKPIIITFTLKELLEKFE 619 >gi|167042844|gb|ABZ07561.1| putative DNA mismatch repair protein, C-terminal domain protein [uncultured marine microorganism HF4000_ANIW137J11] Length = 575 Score = 481 bits (1237), Expect = e-133, Method: Composition-based stats. Identities = 174/595 (29%), Positives = 294/595 (49%), Gaps = 27/595 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E +N+IAAGE+IERP+ +KEL+EN+LDA +SR+ + GG + + D+G Sbjct: 3 RIRLLDEHTVNRIAAGEVIERPASVVKELVENALDAGASRIAVRVEEGGVALVSVRDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + +A Q+H TSKI D D T GFRGEAL SI AV+ + L + P G Sbjct: 63 GMERGDALLAFQKHATSKIRDFNDLLEAATAGFRGEALASIAAVARVRLTTCEPDATNGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + ++ +V +A GT VEV +LF +PAR LK E I + +AIA+ Sbjct: 123 RVLVEDNRVEAVEDIAAPAGTTVEVAELFHALPARAKHLKRPATELRHIMRAVTVLAIAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + G+ ERI ++G + VE++ +S +++ G Sbjct: 183 PGVGFELVHGDRT----LIDAPPGDLRERIGLLLGRETARELVEVDFESAALSIAGMLAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + + ++ IN R VQ + + R AY + +PV L L + P +VD NV Sbjct: 239 PAITLRSPQKLFLHINCRPVQARALAYATRAAYGNLLHERHFPVGALFLTLPPDEVDANV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +R + + + + + + ++ + T L + + H A A Sbjct: 299 HPAKRVVRLAREDAVCATLREVVARVLQEQALVTHLELGEPAATRPHGAAAVAAAPAGAA 358 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + + + AT + YII Sbjct: 359 PAPAAGVQAQLA--------------------VTQSDQPLPATSLPGMRPLELLDDRYII 398 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ DG+ I+D HAAHER+++E++R ++ +Q LL P ++L E + + + + Sbjct: 399 AKGPDGVYIIDFHAAHERVMYERLRLQSQYQRVGTQELLEPLSLELSRAEGSALEQLLPE 458 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L LG ERFG ++ +R IPA+L+ + +R+ + EI++S + + Q+R E +L + Sbjct: 459 LRELGFAIERFGASSFVVRSIPALLAGGGPQR-VREALQEIVESGSMKSAQERHERLLYS 517 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC+ ++R+G ++ +M ++REM PN C HGRPT + + +++++ F R Sbjct: 518 IACHSALRAGDRLTLAQMEFVIREMASIPNPYACVHGRPTVMTITPAELDRKFKR 572 >gi|327439601|dbj|BAK15966.1| DNA mismatch repair enzyme [Solibacillus silvestris StLB046] Length = 629 Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats. Identities = 176/631 (27%), Positives = 286/631 (45%), Gaps = 44/631 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ + E + N+IAAGE++ERPS +KEL+EN++DA S+ +E + G Q+ DNG Sbjct: 3 KIQIMDEWLSNKIAAGEVVERPSSVVKELVENAIDAGSTSIEIFLKEAGLHSIQVIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ + RH TSKI D I T GFRGEAL SI +VS LTL R N G Sbjct: 63 GMDEEDALKSFSRHATSKIEKEQDLFRIRTLGFRGEALASIASVSKLTL--RTSDGNGGV 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + +P A+ GT + V LFF PARL +LK+ Q E D + R+A+ Y Sbjct: 121 HLYMEGGHLKEHQPTALRRGTDITVAQLFFNTPARLKYLKTIQTELGHTIDFVNRIALGY 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++ + + G + ++ + G + + + + G+ + Sbjct: 181 PTIAVKLVHNGQ---TLLQTNGRGQVQQVLAAIYGAHNAKKMLPFEGGNQDYKIHGFASL 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +F+NGR V+ I I AY +P+ R+P+V+L +E DP+ DVNV Sbjct: 238 PEVTRASKNYMSLFVNGRWVKHFVIQKAIIDAYHTYLPIERFPIVLLYVEGDPQLTDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +R + I +I+ I + + ++K I + + P Sbjct: 298 HPAKHQVRLSKEPELLKLIEDTIRSLIREVIRIPLAEKNEKPIRTPTEQMNIWNPAPAMQ 357 Query: 360 T-----------------------------------SLTNTQEKLFLQENRLSTNDLLPS 384 + + Q + +++ Sbjct: 358 PTFNEDKLSTIVERLSNEASIVKEPYAPVPTQQQVVPAAPPEPESSEQHSTEDFHEIPTI 417 Query: 385 DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 ++ Y E++ E H+ QIH YI++Q DG ++DQHAA ER+ +E R Sbjct: 418 EEEMYLEESPMKEVESKRHFPQVEIVGQIHGTYIVAQMEDGFYLIDQHAAQERIKYEYFR 477 Query: 445 QDFNS-TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 QTLL P E + E E L +G+ E FG ++ +RE P Sbjct: 478 DKVGEVNANERQTLLMPLTFHYAADEALRLKESKEALEEVGVFLEEFGLSSFVVREYPTW 537 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 K +++ ++I++++ + T ++ E+ M+C SI++ + +M RL+ + Sbjct: 538 FPKGEEQEIIEELIEQVLSARKTD-IKKLREDAAIMMSCKKSIKANHYLNKEQMERLIND 596 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + N C HGRP I ++EK+F R Sbjct: 597 LRNADNPFTCPHGRPVLIHFTSYEVEKMFKR 627 >gi|194333111|ref|YP_002014971.1| DNA mismatch repair protein MutL [Prosthecochloris aestuarii DSM 271] gi|238693301|sp|B4S3X8|MUTL_PROA2 RecName: Full=DNA mismatch repair protein mutL gi|194310929|gb|ACF45324.1| DNA mismatch repair protein MutL [Prosthecochloris aestuarii DSM 271] Length = 622 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 184/624 (29%), Positives = 309/624 (49%), Gaps = 36/624 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I KL E + N+I+AGE+++RP+ +KELIEN++DA + R+ I GK QI DNG Sbjct: 3 RITKLPESVANKISAGEVVQRPASVVKELIENAIDAGAGRIVLSIKDAGKQLVQIIDNGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ + M V+R TSKIS ++ + T GFRGEAL SI +VSH L S + Sbjct: 63 GMSEPDALMCVERFATSKISSAEELETLGTLGFRGEALASISSVSHFELKSCSEGMDAAF 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G ++ A + GT + VR+LFF +PAR FLK+ E I + ++ A+AY Sbjct: 123 LHRYEGGELVEKSKAAADRGTTISVRNLFFNVPARRKFLKTNATEFKHIFETVKAQALAY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + + + ER++ GE+F ++ +E+ E+++ ++L GY G Sbjct: 183 PEIQWQLFNDDEELFHFRS----SDMHERLNFFFGEEFADSLIEIREENDFLSLYGYVGK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + N +IN R +Q++ + ++ AY E + + P +L L +D RQVD+NV Sbjct: 239 PGMLKRQKNDQLFYINRRVIQNRMLSQALQQAYGELLVERQTPFALLFLGLDTRQVDINV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS-----VLSKKMISSFHQDNAPKTH 354 HPAK ++F + IRN + +++A+ + + + + + + +N+ + Sbjct: 299 HPAKLEVKFEDERNIRNMVYPIVKRAVQLQDFAPDVGIAGLLERQMTQDAMNPENSLRKL 358 Query: 355 LPKYATSLTNTQEKLFLQ-----------------ENRLSTNDLLPSDDPTYSEDNDP-- 395 K A ++T + L+ E +DLL + + Sbjct: 359 EYKRAAGPSSTTDDLYRSYLSELPPVSSPPPGSIGEQGEMFSDLLAPSRDRELKPSVYDR 418 Query: 396 -----VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 +E+ Q+H YI+ Q GL+++DQH AHER+++E+ + N+ Sbjct: 419 SALLQSDENRPDPAGSDSKIWQLHNKYIVCQIKTGLMVIDQHVAHERVLYERAVEIMNNN 478 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 SQ LL P+ I+L E + E +DL RLG FG + I I + Sbjct: 479 VPNSQQLLFPQKIELKSWEYEIFQEIRDDLCRLGFNLRSFGNRTVMIEGIAQDVRNGTEA 538 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 +L+++IDE ++ L+ R EN+ + +C +I SG+K+ EM L+ + Sbjct: 539 VILQNMIDEYQQNALKLKLEKR-ENLAKSYSCRNAIMSGQKLSLEEMRSLIDRLFATRMP 597 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP IK+ L ++++FGR Sbjct: 598 YVCPHGRPVIIKISLDQLDRMFGR 621 >gi|56475775|ref|YP_157364.1| hypothetical protein ebA658 [Aromatoleum aromaticum EbN1] gi|56311818|emb|CAI06463.1| similar to DNA mismatch repair protein [Aromatoleum aromaticum EbN1] Length = 633 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 209/631 (33%), Positives = 341/631 (54%), Gaps = 47/631 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L++ ++NQIAAGE++ERP+ +KE++EN+LDA + ++ + GG ++ D+G G Sbjct: 9 IRPLADVLVNQIAAGEVVERPASVLKEVLENALDAGARAIDVQLEQGGVRRIRVADDGCG 68 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A++RH TSKI+ +D + T GFRGEAL +I AV+ LTL SR + + Sbjct: 69 IARDDLALALERHATSKIATLEDLEQVGTMGFRGEALAAIAAVARLTLTSRAEGSAHAWR 128 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I S+ P A+N GT+V+V DLF++ PAR FLKSE E +V RR+A+A P Sbjct: 129 I---DGTDRSLAPAALNQGTVVDVADLFYSTPARRKFLKSEATEYAHCDEVFRRIALARP 185 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + + +++ G+ R++ ++G+DF+ +A L+ + + L G +P Sbjct: 186 DIGLQLAHNGRVVHRLPA----GDPLRRVAALMGDDFLQHARNLDADAGPLRLAGVAALP 241 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 ++R + + Y+F+NGR V+DK + +R AYA+ + R+P VL LE+DP VDVNVH Sbjct: 242 AYSRTSRDAQYLFVNGRFVRDKLLTHAVRQAYADILHGSRHPAYVLFLELDPAGVDVNVH 301 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKK--GISTSSVLSKKMISSFHQDNAPKTHLPKY 358 PAK +RFR + F+ ++ +++ GI + + + D T + Sbjct: 302 PAKIEVRFREARAVHQFVFHALTRSLAASGAGIGVTGDNANAAAVAAEADPGGSTAPARA 361 Query: 359 ATSL----------TNTQEKLFLQENRLSTNDLLPSDDPTYSEDND-------------- 394 A L Q +L ++ S D S P S + Sbjct: 362 ANPLRYANAAGHDAAPVQGRLAMEAASRSYYDFAASARPAESPSSPADASGFRPTAFAPS 421 Query: 395 -----------PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 P+ EA LG A AQ+H YI++Q GLV+VD HAAHER+++EK+ Sbjct: 422 AGRGAATAAEAPMPPIEAASAPLGYAIAQLHGIYILAQNAAGLVLVDMHAAHERILYEKL 481 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + + Q LL P ++ + + A E E L R+G + GP +A+R +PA+ Sbjct: 482 KTVLDGQP-AVQRLLIPAVLSISAKDMAAAEECAEVLARMGFEVAPVGPAELAVRSVPAL 540 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 L+ I +LLR +++E+ + + + R +LATMAC+G++R+ R + EMN LLR+ Sbjct: 541 LASAPIGELLRKLLEELREFPASEVVTARRNELLATMACHGAVRAHRSLTIPEMNALLRD 600 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ME + QCNHGRPT+ +L + ++++ F R Sbjct: 601 MEATERADQCNHGRPTWTQLTMGELDRFFMR 631 >gi|301058292|ref|ZP_07199332.1| DNA mismatch repair protein, C-terminal domain protein [delta proteobacterium NaphS2] gi|300447626|gb|EFK11351.1| DNA mismatch repair protein, C-terminal domain protein [delta proteobacterium NaphS2] Length = 573 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 189/595 (31%), Positives = 309/595 (51%), Gaps = 28/595 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L EKI +QIAAGE+IERP+ ++ELI+NS+DA + R+ GGK +++DNG Sbjct: 3 TIRILPEKIASQIAAGEVIERPASVVRELIDNSIDARADRISIKTERGGKGLIRVSDNGI 62 Query: 62 GMTSEEIPMAVQRHCTS--KISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +++ + ++RH TS KI+ D S++ +FGFRGEA+PSI AVS L + S P + G Sbjct: 63 GMGRDDLLLCLERHATSKIKIASDLSSVTSFGFRGEAIPSIAAVSRLEITSLPDKALLGN 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ +SG K+ SV V GTIV V++LFF +PAR FLK+ + E N I D + R A+ + Sbjct: 123 RVTMSGGKLLSVEEVGAPQGTIVAVKNLFFNMPARRKFLKTPRTEMNHIVDAVLRAAMPF 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 K+SF + + + S R+S ++ + + ++ + + Sbjct: 183 RKISFRLEEGEREIFHLPASSNPS---LRLSHLMDRMAGKSLLSGENSQKDLHIAVHAAP 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 F R A++ +V++NGR ++D+F+ I Y + + GRYP ++ + IDP Q+DVNV Sbjct: 240 AEFARKRADRLFVYVNGRNIKDRFVTKAIIEGYGQRLMKGRYPQALVFITIDPAQIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK I+F+N + + + + + ++ L K F N P+ A Sbjct: 300 HPAKQEIKFQNGQQVFRAVAAVVHQTLK-----PAAHLVPKRPEPF--TNLKSGEAPQSA 352 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 S+ T E R + + + Q+ YI+ Sbjct: 353 PSIFKTVEPYVPATVREPPPAPIKAPSMDFKAPE---------------IIGQLGNMYIL 397 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 Q DGL++VDQHAAHER+++E +++ S I Q LL P ++ E +++E Sbjct: 398 CQMDDGLLLVDQHAAHERIVYETLQKSLRSANIEIQNLLLPYEMEFSLKEKGVLLEKGHV 457 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L +LGI+ + FG N +R +PA+L N L+ + I ++ D + + Sbjct: 458 LAQLGIELDHFGGNTFLLRSVPALLKDVNWQMLISEFISKL-DEGVPLEGVHLTDEAIKI 516 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MAC+G+IR+G+ + EM+ L+R++ + + C HGRP F ++ K+F R Sbjct: 517 MACHGAIRAGQHLTPTEMSDLVRQLSEMDLPTNCPHGRPIFKSFTYFELSKMFKR 571 >gi|91200771|emb|CAJ73824.1| similar to DNA mismatch repair protein MutL [Candidatus Kuenenia stuttgartiensis] Length = 593 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 192/601 (31%), Positives = 320/601 (53%), Gaps = 19/601 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K++ L +IN+IAAGE+I+R + +KELIEN++DAE+ R++ + GG+ +I+D+G Sbjct: 3 KVKILPPSVINKIAAGELIDRSAAVVKELIENAIDAEAKRIDVYLEDGGRKLIRISDDGV 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + + H TSK+S +D I+T GFRGEALPSIGAVS+ + SR +GA Sbjct: 63 GIDAEDLALVFRSHTTSKLSSAEDLFAINTLGFRGEALPSIGAVSNSKITSRIRGAISGA 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I G +I VR GT +EV+DLFF P R F+K+ E + I+DV+ R A+ Y Sbjct: 123 EIKTEGGRIGDVRECGAPEGTQIEVQDLFFNTPVRKKFMKTAPTEMSYISDVLTRFALCY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + FT + + ERI G + + + + +L+GY Sbjct: 183 PNIHFTLRHNNRTVFNL---PPVQEVIERIETFFGSELKKHLLSAFLREELFSLKGYIAP 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P N+ N ++F+NGR ++D I I AY + RYP+V L L + P +VDVNV Sbjct: 240 PFLNKANGRLQFIFLNGRYIKDTAIYRAISDAYHGKLMNKRYPIVFLFLTVAPSEVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ +RFRN +++ N+++ +++ A+NK + +++ + +F +D + Sbjct: 300 HPTKTEVRFRNKSVVFNYVLSTLKDALNKSQPKSIDIVTPEK--TFQRDLGNTDTVDHRN 357 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG--IACAQIHQNY 417 TSL E+ ++ T PS D ++ EE QIH + Sbjct: 358 TSL---WEQFPFEKTVEKTPASGPSTDVKHTTAMPIREEISVGKAIFSGKKRYFQIHNAF 414 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 I+ +T +GL I+DQHA HE +++ + + S++ Q LL PE+++L + ++ Sbjct: 415 IVEETNEGLNIIDQHALHEIILYHAILKGMQSSQSPRQRLLIPELVELNPKDFFFVLSIK 474 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 E L +GI+ E FG N I IR P IL N + + ++ + + + + + ++ Sbjct: 475 EQLEGIGIEIEEFGSNTIMIRSFPQILKHLNGKEFIENLTHDFGEEDSRKGNEGVMNKLV 534 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS----SQCNHGRPTFIKLKLSDIEKLFG 593 MAC ++++G++++ E+ L MEK N + C HGRPT + L L ++ K F Sbjct: 535 NIMACKAAVKAGQRLEYQEIEEL---MEKKKNINAYTNNCPHGRPTTLSLSLDELYKHFK 591 Query: 594 R 594 R Sbjct: 592 R 592 >gi|270308366|ref|YP_003330424.1| DNA mismatch repair protein, MutL/HexB family [Dehalococcoides sp. VS] gi|270154258|gb|ACZ62096.1| DNA mismatch repair protein, MutL/HexB family [Dehalococcoides sp. VS] Length = 566 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 185/599 (30%), Positives = 318/599 (53%), Gaps = 39/599 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + I +IAAGE+IERPS +KEL+ENSLDA + RV+ VI GG + +++D+G Sbjct: 1 MPIKLLDKTTIARIAAGEVIERPSSVVKELLENSLDAGAKRVDVVIREGGIGYIEVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ +A +RH TSK+S +D I + GFRGEALPSI AV+ L +++ +G Sbjct: 61 CGIVFSEVLLAFERHATSKLSSFEDIYAISSLGFRGEALPSIAAVADLEMLTAARTEESG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++SG ++ +A +PGT +++ LF +PARL FLK+ Q E + +++V+ A+A Sbjct: 121 TYLSLSGGEMVKHTRMARSPGTTIKLTRLFSRVPARLKFLKTPQREASKVSEVVLSYALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE---ITLQG 235 YP+V FT S N NG + + ++ G D + ++L S I + G Sbjct: 181 YPEVKFTLSIDGRNTLN---TPGNGKLRDAVLEIYGNDVASKMLDLETDSYRSSSINISG 237 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 P +R N N + F+N R +Q + + + AY+ + +GRYP+ V+ + +D V Sbjct: 238 LVSPPEISRSNRNSLHFFVNRRLIQSRALQKAVEQAYSGLLIVGRYPMGVINIWLDGALV 297 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVN+HP K+ ++F + + + + ++ A+ + K + Sbjct: 298 DVNIHPTKAEVKFSDENAVFTSVQRVVRSALVE-----------------------KPPI 334 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 P+ + + Q++ QE D+ T + ++ ++ + L QI Sbjct: 335 PRIEETPSVYQQEAARQEPI--WGDIPKPIGVTQQYASPLIQSAKTSSLPLLRLVGQIGG 392 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 Y++++ DGL I+DQHAAHER+ +E++ S + Q+LL P I++L + A+I + Sbjct: 393 LYLLAEGPDGLYIIDQHAAHERIRYEEIASQIPS-ENARQSLLEPFILELNPVQEAMIEK 451 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 +L +G + E FG ++ IPA + LL +++D D+ +++R+ Sbjct: 452 CKSELDLMGFEIEEFGRRVFRVQSIPAGFTAPQAKALLSELVDNPKDAPAE--IKERLRR 509 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + MAC+ ++R+G+ + EM LL ++EK C HGRPT +K+ S +EK F R Sbjct: 510 L---MACHTAVRAGQVLTEAEMRELLLKLEKTAVPGHCPHGRPTIVKIDFSQLEKDFKR 565 >gi|116328839|ref|YP_798559.1| DNA mismatch repair ATPase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|122283376|sp|Q04Z69|MUTL_LEPBL RecName: Full=DNA mismatch repair protein mutL gi|116121583|gb|ABJ79626.1| DNA mismatch repair enzyme (predicted ATPase) [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 596 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 189/600 (31%), Positives = 305/600 (50%), Gaps = 14/600 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LS ++INQIAAGE+IE +KEL+ENS+DA +++++ GG S +ITDNG Sbjct: 3 KIQELSPELINQIAAGEVIESAHSVVKELMENSMDAGATQMDIESKDGGLSLLRITDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+I A++RH TSKI D D N+ ++GFRGEAL SI +VS LTL S T Sbjct: 63 GIDPEDIEPALKRHATSKIRDYGDLENVLSYGFRGEALASIASVSRLTLESGIKNQKTAW 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I G KIS + GT + V +LFF P R FLKS + E I D + A+A Sbjct: 123 KICSIGGKISEKEEIPGFVGTKILVEELFFNTPVRRKFLKSVRSEDKKIRDRVTTQALAR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V F + + + N +RI + GE+F ++ +E++ + + GY Sbjct: 183 HDVRFRLFQDGKEVFVL---PSRENKKDRIVDLFGENFRDHLLEVSLERGGLNATGYISD 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F + N +VF+NGR V+ K+ + ++ AY E +P +P L EIDP +VDVNV Sbjct: 240 PDFYKSNRTGQFVFVNGRPVEIKYGSTLLKKAYDELLPPNGHPYCFLFFEIDPSRVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK IRF + F + IQK + + L K+++ + + ++ Sbjct: 300 HPAKKEIRFLDEEGFNGFFLTLIQKELRSSTPVSFLELKKRLLRPTPETFKTSSLYQAHS 359 Query: 360 TSLTNTQE----KLFLQENRLSTNDL-LPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 +S + +LF + R DL + S D V + + + + Sbjct: 360 SSRSGESPLLSRELFTEVPRQEGFDLDRMGPGASLSALTDNVVKHSSFVPK--KHFGVLF 417 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 + +I+++ DG I+DQH AHER+ +E++ + Q LLTP ID+ + E I+ Sbjct: 418 ETFILAEAEDGFYIIDQHTAHERIRYEEVLRKLEKKNYGIQPLLTPIRIDVSKQEQEDIL 477 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 ++ +GI + G +++ +REIPA + +++ D ++ T + + Sbjct: 478 NRKKEYEEVGIFLDPLGEDSVVLREIPAYMEPGEEKEIILDFLN--RTEGKETTEPELYD 535 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +AC +I+ G + + +L + N S+C HGRPT +KL D+E++F R Sbjct: 536 LMAKCVACRSAIKKGDHLSDPILAEILNRLSYCENPSRCPHGRPTLVKLSRDDLERMFHR 595 >gi|309389298|gb|ADO77178.1| DNA mismatch repair protein MutL [Halanaerobium praevalens DSM 2228] Length = 650 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 183/656 (27%), Positives = 319/656 (48%), Gaps = 73/656 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L + + NQI+AGE+IERP+ +KELIENS+DA + +E I GG+ ++ D+G G Sbjct: 4 IKQLPQNVANQISAGEVIERPASIVKELIENSIDAVAKNIEVKIEDGGRELIKVKDDGHG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++I A R+ TSKI DD ++++ GFRGEAL SI +V+ + ++SR +N + Sbjct: 64 IEADDIESAFNRYATSKIEDIDDLYSLYSLGFRGEALASIASVAEVEMISRHQASNQAMK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G I + +P GT + VR+LF+ PAR +LK E + I+ ++ A A Sbjct: 124 IKIKGGDILAKKPTGSTIGTEISVRNLFYNTPARYKYLKRTTTEFSHISKIVSAEATANS 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF K+ +G + I V G + N + + + I L GY P Sbjct: 184 NLSFKLYHNGR---KILSTPGSGKLKDTIYAVYGSEIAENLIPIETEDRYIKLSGYLCRP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + F+NGR + + + TAY + GR P+V L ++++P VDVNVH Sbjct: 241 ELTRSSRSHELFFVNGRPIYNNLTAKAVETAYNKLTNPGRKPIVFLFIKVNPILVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP--------- 351 PAK ++F II + I +++++ + + L + + D A Sbjct: 301 PAKREVKFSRNQIIFDVIKKAVRQCLKANDPTRRIKLEQNKTETTKSDKAEDEINRENLF 360 Query: 352 ---------------------------------KTHLPKYATSLTNTQEKLF-------- 370 K + P+ + L + +K + Sbjct: 361 EKNIKNTSDEKKAGLNKNQKLNTSKISKKGKYKKPNYPQKQSQLNSYAQKDYQKNINYGK 420 Query: 371 ------------LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 +E++ + N++ ++ YS EE I QI +Y+ Sbjct: 421 DNKGLTKKNGQSFKESQSNLNEIRAAEKQKYSLVESKAEEK------YFIFLGQIFNSYL 474 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + +T GL IVDQH A ER+++EK +FN +SQ+LL P I+L E ++ +++ Sbjct: 475 LIETDKGLKIVDQHNAQERILYEKFYAEFNQKDKSSQSLLIPVKIELSIEEREIVRQYEN 534 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 ++ +LGI FG N I I+E+P +L K+ ++ ++I ++ ++ T + + + +L Sbjct: 535 EIKKLGIDFSDFGNNTILIQEVPVLLKNKSTRNIIEELIADLAEAGKTKSTAEIQKRMLE 594 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC SI++G+ + E +L++++ + N +C H RP I + +IEK GR Sbjct: 595 YLACRSSIKAGQPLTKRESIQLIKDLYQTENPYRCPHSRPVMININRKEIEKGLGR 650 >gi|303233710|ref|ZP_07320364.1| DNA mismatch repair protein, C-terminal domain protein [Finegoldia magna BVS033A4] gi|302495144|gb|EFL54896.1| DNA mismatch repair protein, C-terminal domain protein [Finegoldia magna BVS033A4] Length = 626 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 189/628 (30%), Positives = 303/628 (48%), Gaps = 41/628 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LSE I +IAAGE+IERP IKEL+ENS+DA S + I GGK + ++DNG G Sbjct: 2 IKLLSEDTIQKIAAGEVIERPVSVIKELVENSIDAGSDTIIVEIKNGGKDYISVSDNGSG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + EI +A +RH TSK+ DD +I T GFRGEAL SI AVS L + +R G + Sbjct: 62 IEKNEIELAFKRHSTSKLEKFDDLYDIRTLGFRGEALASILAVSKLIVSTRTKSEKIGKK 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + K+ + VAMN GT + ++DLF+ +P R F+KS+Q E NLIT + + AI Sbjct: 122 VEFRNSKVINKSDVAMNVGTKIVIKDLFYNVPVRKKFMKSDQTEANLITTTMYKFAICNT 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 VS + ++ N + E I + G NN ++++ S++ + GY Sbjct: 182 DVSIKYIKDNKTLFETK---KNSSIKENIINLFGTSMSNNLIDIDISSHDYKIHGYISNN 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N Y+F+NGR ++ + I +T+ + Y IP GR+P+ L EI+P+ VDVNVH Sbjct: 239 NLYRANRQMQYIFLNGRFIKSEDIRNTVESNYKSVIPNGRFPLFWLFFEINPKLVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL-------------SKKMISSFHQ 347 P K ++ I + + ++ + T+ + S+ Sbjct: 299 PNKQKVKISILDEILEQLNKKVRFLLENNVRITNISQSIPDDKYKDLRRNYFESDSNLTN 358 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQEN------------RLSTNDLLPSDDPTYSEDNDP 395 K P Y+ +L N KL N + TN + +DN Sbjct: 359 YKYDKVSEPTYSYNLFNENSKLSNLRNIRYKDESEAFNKKPETNKYFFKEKDVAKQDNLF 418 Query: 396 VEESEAT-------HYQLGIACAQIHQNYIIS--QTTDGLVIVDQHAAHERLIFEKMRQD 446 ++E E Y+ + + YI++ + + + DQHA HER+ +EK+ + Sbjct: 419 LDEIEQIKVESYLAKYEKFDILTVLFKTYILAKDEYDSKIYLFDQHACHERINYEKLTKQ 478 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 ++ SQ L P I L + + + LG +++ F +++ +R +P + Sbjct: 479 MLDKEVVSQNLAFPINISLTDELMEIYTNNKSIFEELGYESDVFSDDSVVVRAVPYLFGN 538 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 N L DI+D I + D IE+ + +C S+++G + + E+ +LL ++ K Sbjct: 539 SNAEFLFTDILDTIA--KNSNDPFDVIESKVIKRSCKMSVKAGDTLSNFEIIKLLEDLFK 596 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRPTFI++ D+EK+F R Sbjct: 597 CEYPLTCPHGRPTFIEMNEKDLEKMFMR 624 >gi|256847967|ref|ZP_05553411.1| DNA mismatch repair protein mutL [Lactobacillus coleohominis 101-4-CHN] gi|256715027|gb|EEU30004.1| DNA mismatch repair protein mutL [Lactobacillus coleohominis 101-4-CHN] Length = 662 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 179/648 (27%), Positives = 296/648 (45%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L+ + NQIAAGE+IERP+ IKEL+ENSLDA S R++ V+ G ++ D+G Sbjct: 3 KIHELNNVLANQIAAGEVIERPASIIKELVENSLDAHSKRIDIVVTKAGLGELRVIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ A +RH TSKIS D + T GFRGEALPSI +V+ + + + +G Sbjct: 63 GIATEDVKEAFKRHATSKISTRQDLFRVQTMGFRGEALPSIASVADVVMTTAT-GGASGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I G ++ + GT V+V +LFF PARL +LKS Q E + + D+I R+A+A Sbjct: 122 MIHFHGGELKDFQAAPARRGTDVKVSELFFNTPARLKYLKSPQTELSRMVDIINRLALAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ +F+ ++ + NGN + I+ + G + ++ + T+ G + Sbjct: 182 PDVAISFTHDGREMFR---SAGNGNVQQVIAAIYGVKVGRKMLAIHGADPDFTVDGLVSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + + IN R V++ + I Y + +GRYPVVV+ +++DP VDVNV Sbjct: 239 PELTRASGQYMTITINHRYVRNYQLTKAIIEGYGSKLMVGRYPVVVVNIDLDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +R + I +IQ+ I ++ + + + + + Y+ Sbjct: 299 HPAKREVRLSKEQQLATLISTTIQQKIAQQNLIPDVGERANQLLTTPNSSVVEEKTDTYS 358 Query: 360 TSLTNTQ-------------------------------EKLFLQENRLSTNDLLPSDD-- 386 + T + LQ+ RL D ++ Sbjct: 359 QTANLTSNEAATPVMMDHSNPAKVDSRDSIVATPIVIHSRAELQQPRLKEFDRKYQNEVA 418 Query: 387 ----------PTYSEDNDPVEE----------SEATHYQLGIACAQIHQNYIISQTTDGL 426 E N EE + + Q+ ++++Q +DGL Sbjct: 419 TPFNDEQTTVNNREETNQHTEEVSLAINDQGDHDQQRFPQLQYIGQLQGTFLLAQASDGL 478 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 I+DQHAA ER+ +E+ R+ Q L P +++ + I E L ++G+ Sbjct: 479 YIIDQHAAQERVNYERFRKAIGQVSADQQNFLQPLVLNYSVSDALKINEQLTTLQQVGLH 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E FG N+ + P R++ID +I + T+ + M+C +I Sbjct: 539 LEPFGQNSFLLSSHPTWFIDGQEEDTAREMIDWVIQNGH-LTVAEFRAKTAIMMSCKRAI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + ++ LL+ + N C HGRP I +D+EKLF R Sbjct: 598 KANHHLDDLQAKALLKTLPHCENPFNCPHGRPVLIHFTDTDLEKLFKR 645 >gi|114566509|ref|YP_753663.1| DNA mismatch repair ATPase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318426|sp|Q0AYB2|MUTL_SYNWW RecName: Full=DNA mismatch repair protein mutL gi|114337444|gb|ABI68292.1| DNA mismatch repair protein MutL [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 584 Score = 478 bits (1231), Expect = e-132, Method: Composition-based stats. Identities = 173/596 (29%), Positives = 302/596 (50%), Gaps = 14/596 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L++ +IN+IAAGE+IERP+ +KEL+EN++DA S + I+G G ++TD+G Sbjct: 1 MAIKLLNDNVINKIAAGEVIERPASVVKELLENAIDAASRNIAVKISGAGLDSIEVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ EE+P+A RH TSKI + D I + GFRGEALPSI +VS + + S+ + G Sbjct: 61 EGISMEELPLAFLRHATSKIENEGDLLRIMSMGFRGEALPSIASVSRIDIYSKKEKQE-G 119 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I G KI ++ G+ + V DLFF PAR FL+S E N +++ + A+A Sbjct: 120 IHCFIEGGKILDLQYFPGPEGSKIIVSDLFFNTPARKKFLRSPVTEGNNAYELVIKYALA 179 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P ++ +FS K ++ NG+ + + + G DF+ + + + +++ G Sbjct: 180 RPDIAISFSNEKR---QLFRTPGNGSLNDAVIAIFGRDFLEPLIPVKWEGLSLSISGLIS 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P + N + +F+N R ++ + + Y + P+V+L + + P +DVN Sbjct: 237 PPGVAKMNRKRQLIFVNQRPIRSPLLYRALDEGYRGLLLAREQPLVILQIAVPPDSIDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP KS IRFR+ I + ++ +N + L + F+ KT K Sbjct: 297 VHPQKSEIRFRDEQSIFRSLCGLLRDTLNARDYRLQDNLPQNRSQPFYPAAGRKTAKQKV 356 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 + R+ + + E S + Y Q+ +YI Sbjct: 357 EEQPVIPFMHNRKADKRVEETGG---EPWIPFYPEEQAEGSVSRVYDEFKILGQLWDSYI 413 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + + L IVDQHAAHER+I+ +++Q + +++ Q L P ++DL + L+ ++ E Sbjct: 414 LLEKEQTLNIVDQHAAHERIIYSRLQQFYAASRGEMQMLAFPLLMDLSLRDMELLEKNQE 473 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L LG ++ GP +I +R PAI++ + R+++ EI++ + + Sbjct: 474 ILGELGFDLQQAGPRSIFLRGTPAIIAGQE-----REVLFEILELLAGGQGINLKNEAII 528 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MAC ++++G ++ EM ++++E+ + C HGRPT I K +D+E++F R Sbjct: 529 KMACKKAVKAGTRLDYREMMQIIQELFITDDYKNCPHGRPTIIAWKQADLERMFKR 584 >gi|294827808|ref|NP_711356.2| DNA mismatch repair protein MutL [Leptospira interrogans serovar Lai str. 56601] gi|59798328|sp|Q72PF7|MUTL_LEPIC RecName: Full=DNA mismatch repair protein mutL gi|59798410|sp|Q8F6X4|MUTL_LEPIN RecName: Full=DNA mismatch repair protein mutL gi|293385653|gb|AAN48374.2| DNA mismatch repair protein mutL [Leptospira interrogans serovar Lai str. 56601] Length = 593 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 183/595 (30%), Positives = 297/595 (49%), Gaps = 7/595 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LS ++INQIAAGE+IE +KEL+ENS+DA +++V+ GG S +ITDNG Sbjct: 3 KIQELSPELINQIAAGEVIESAHSVVKELMENSMDASATQVDVESKDGGLSLLRITDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A++RH TSKI D D ++ ++GFRGEAL SI +VS LTL S + T Sbjct: 63 GIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEALASIASVSRLTLESGTKEQKTAW 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + KIS + GT + V +LFF P R FLKS + E I D + A+A Sbjct: 123 KTRSVAGKISEKEEIPGFIGTKILVEELFFNTPVRRKFLKSIRSEDKKIRDRVTTQALAR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V F + + T N ERI + GE+F ++ +E++ + I GY Sbjct: 183 EDVRFRLFQDGKEVFVL---PTRENKKERIIDLFGENFRDHLLEVSLERGGIQATGYISD 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F + N ++FINGR ++ K+ ++ AY E +P +P L EIDP +VDVNV Sbjct: 240 PDFYKSNRTGQFIFINGRPIEIKYSSVLLKKAYDELLPPNGHPYCFLFFEIDPSRVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK IRF + F + IQK + + L K+++ + ++ + + Sbjct: 300 HPAKREIRFLDEDGFNGFFLALIQKELRSSTPVSFLELKKRLLKPAPETHSTTSFYQARS 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + + L P S E + + + + + +I+ Sbjct: 360 SGKNPLLGRELFSGVSKQEGFELDRMGPGVSLSELTDERVKHSSFVPKKHFGVLFETFIL 419 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ DG I+DQH AHER+ +E++ + Q LLTP ID+ + E I+ ++ Sbjct: 420 AEAEDGFYIIDQHTAHERIRYEEVLRKLEKRNYGIQPLLTPIRIDVSKQEQEDILNRKKE 479 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 +GI + G ++I +REIPA + +++ D ++ + + + + Sbjct: 480 YEEVGIFLDPLGEDSIVLREIPAYMEPGQEKEIVLDFLN--RTEGKETSEPELYDLMAKC 537 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC +I+ G ++ + +L + N S+C HGRPT +KL D+E++F R Sbjct: 538 VACRSAIKKGDQLSDPILAEILNRLSYCENPSRCPHGRPTLVKLSRDDLERMFHR 592 >gi|42523070|ref|NP_968450.1| DNA mismatch repair protein MutL [Bdellovibrio bacteriovorus HD100] gi|39575275|emb|CAE79443.1| DNA mismatch repair protein MutL [Bdellovibrio bacteriovorus HD100] Length = 626 Score = 478 bits (1230), Expect = e-132, Method: Composition-based stats. Identities = 179/626 (28%), Positives = 307/626 (49%), Gaps = 39/626 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++++QIAAGE++ERP+ +KEL+ENS+DA ++RV GG+ ++ DNG Sbjct: 6 MSIQILSPEVVDQIAAGEVVERPAHLVKELVENSIDAGATRVHVEFYDGGR-IVKVIDNG 64 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM+ E++P +++R TSKIS DD ++ TFGFRGEAL SI +VS LTL SR + Sbjct: 65 KGMSPEDLPKSLERFATSKISKTDDLWSLRTFGFRGEALASIASVSKLTLTSRRAGDEQA 124 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ K + V + GT + + +LF PARL FLKS+ E + I ++ MA++ Sbjct: 125 HQLISEYGKRKEIDKVGGSQGTTILIENLFDNTPARLKFLKSDSAENSAIKTTLKAMALS 184 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + V F + + E+I ++ E + Sbjct: 185 HYDVEFRIQENGKLVAFWPACKSRKDRVEQILEIKP------LFEGEASRENVKAYAVFA 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P + ++F R +QD+ + + + AY + G YP+ + +E+DP VDVN Sbjct: 239 DPHNVAKTSKNIWLFAQNRWIQDRSLQAAVNEAYRSLLMHGEYPIAAVWVEVDPDCVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM----------------- 341 +HP KS ++F++P++ + +++ + + S ++ + Sbjct: 299 IHPTKSQVKFQDPSLAFRAVAAALRGTLEQAPWIKRSDVATQNVTMPLTQNSSEEFKSTD 358 Query: 342 -ISSFHQDNAPK------------THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + +F P+ T K S + + + +T L Sbjct: 359 GLPNFASQPMPQQNLRFQDNSLEVTQFQKKEFSFPASSFPVSSLQQPQTTYQALAESAAQ 418 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 EE+ ++ Q + YI++Q+ D LV VDQHAAHER++FEK+ + Sbjct: 419 RESFAPKAEEASLGYWSSLEVLGQANLTYIVTQSRDKLVFVDQHAAHERVVFEKLMNAWK 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 K+ Q L P ID+ + ++ +++ RLG+ E GP + ++ P ++ + + Sbjct: 479 GGKVDIQDFLFPLAIDMSPEKVEGLLTMAKEMERLGVFIEALGPGTVGVKAAPLMIKESS 538 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 + +L + EI+D +Y+L+ + +I ATMAC+ +R+G+ + +M LLR+M+ P Sbjct: 539 LSGVLDKMATEIVDQGGSYSLERTVGDICATMACHSVVRAGQSLSPDQMRSLLRDMDMFP 598 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 SS C HGRP ++ +EK FGR Sbjct: 599 LSSFCPHGRPVSVEYPYYKLEKDFGR 624 >gi|154150760|ref|YP_001404378.1| DNA mismatch repair protein [Candidatus Methanoregula boonei 6A8] gi|153999312|gb|ABS55735.1| DNA mismatch repair protein MutL [Methanoregula boonei 6A8] Length = 612 Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 167/608 (27%), Positives = 283/608 (46%), Gaps = 22/608 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDNG 60 IR L +NQIAAGE+IERP+ +KE++EN++DA + + I GG + ++TD+G Sbjct: 10 IRVLDPATVNQIAAGEVIERPASVVKEMVENAIDAGARTIRIDITSVQGGITAIKVTDDG 69 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT- 117 GM+ + +A H TSKI DD +IH+ GFRGEAL SI A++ +TL+++P ++ Sbjct: 70 CGMSPVDAELAFVPHATSKIHTLDDLFSIHSLGFRGEALASIAAIAKVTLITKPQGSDRV 129 Query: 118 -GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G +I + G +I GT V V +LFF PAR F KS E I ++ + Sbjct: 130 PGTRIVVVGGEIQLRGGTGAPEGTSVLVEELFFNTPARKKFQKSLTTEIARIHGILEGLC 189 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 +A P++SF + G + I+++ G + + + + GY Sbjct: 190 LACPQISFKVFHNNREQL---ATERTGRPLDTIARIFGNESARELIPAAAALPFMRISGY 246 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P +R + ++ + INGR + + + IR Y +P GRYPV L LEID R VD Sbjct: 247 ISRPALSRKDHDRILIAINGRYISSPPVTTAIREGYGTLLPHGRYPVAFLSLEIDTRLVD 306 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 +NVHP K +R I + + ++++ A+ + K + + + +P Sbjct: 307 INVHPTKKEVRLTKEKEITDGVREAVRAALASGDLIPEVNAPKPVYRKLDAGGSDLSPVP 366 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV---------EESEATHYQLG 407 A T T + D Sbjct: 367 YVAEPAEPYCAGTLPSAVSTGTLSPFTEPTHTGTVATDYRLRQTELASGVPPVTAVVPEM 426 Query: 408 IACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 QI YI+++ G L+I+DQHAAHER+ +E++ + + +Q LL P II Sbjct: 427 DVIGQIGGIYILAEAAGGELIIIDQHAAHERIFYEQVTRSMAAR--QAQELLVPAIIHCP 484 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 + A++ L + G+ E FG + +R +PA++ K P ++ D++ +++ Sbjct: 485 PKDTAILKSLIPALAQEGVIIEEFGAGSFLVRAVPALMGKVEGPAMIDDLVSDLLHKDLD 544 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 + DR E + +AC +I++G + RL+ ++ C HGRPT ++ + Sbjct: 545 RPVSDR-ERLTRIIACRSAIKAGTVCTVEQCRRLISQLRATTTPFTCPHGRPTMVRFTRA 603 Query: 587 DIEKLFGR 594 ++++F R Sbjct: 604 KLDEMFKR 611 >gi|116331748|ref|YP_801466.1| DNA mismatch repair enzyme [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280513|sp|Q04QW2|MUTL_LEPBJ RecName: Full=DNA mismatch repair protein mutL gi|116125437|gb|ABJ76708.1| DNA mismatch repair enzyme [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 596 Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 189/600 (31%), Positives = 305/600 (50%), Gaps = 14/600 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LS ++INQIAAGE+IE +KEL+ENS+DA +++++ GG S +ITDNG Sbjct: 3 KIQELSPELINQIAAGEVIESAHSVVKELMENSMDAGATQMDIESKDGGLSLLRITDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+I A++RH TSKI D D N+ ++GFRGEAL SI +VS LTL S T Sbjct: 63 GIDPEDIEPALKRHATSKIRDYGDLENVLSYGFRGEALASIASVSRLTLESGIKNQKTAW 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I G KIS + GT + V +LFF P R FLKS + E I D + A+A Sbjct: 123 KICSIGGKISEKEEIPGFVGTKILVEELFFNTPVRRKFLKSVRSEDKKIRDRVTTQALAR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V F + + + N +RI + GE+F ++ +E++ + + GY Sbjct: 183 HDVRFRLFQDGKEVFVL---PSRENKKDRIVDLFGENFRDHLLEVSLERGGLNATGYISD 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F + N +VF+NGR V+ K+ + ++ AY E +P +P L EIDP +VDVNV Sbjct: 240 PDFYKSNRTGQFVFVNGRPVEIKYGSTLLKKAYDELLPPNGHPYCFLFFEIDPSRVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK IRF + F + IQK + + L K+++ + + ++ Sbjct: 300 HPAKKEIRFLDEEGFNGFFLTLIQKELRSSTPVSFLELKKRLLRPTPETFKTSSLYQAHS 359 Query: 360 TSLTNTQE----KLFLQENRLSTNDL-LPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 +S + +LF + R DL + S D V + + + + Sbjct: 360 SSRSGESPLLSRELFTEVPRQEGFDLDRMGPGASLSALTDNVVKHSSFVPK--KHFGVLF 417 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 + +I+++ DG I+DQH AHER+ +E++ + Q LLTP ID+ + E I+ Sbjct: 418 ETFILAEAEDGFCIIDQHTAHERIRYEEVLRKLEKKNYGIQPLLTPIRIDVSKQEQEDIL 477 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 ++ +GI + G +++ +REIPA + +++ D ++ T + + Sbjct: 478 NRKKEYEEVGIFLDPLGEDSVVLREIPAYMEPGEEKEIILDFLN--RTEGKETTEPELYD 535 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +AC +I+ G + + +L + N S+C HGRPT +KL D+E++F R Sbjct: 536 LMAKCVACRSAIKKGDHLSDPILAEILNRLSYCENPSRCPHGRPTLVKLSRDDLERMFHR 595 >gi|45658356|ref|YP_002442.1| DNA mismatch repair protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601599|gb|AAS71079.1| DNA mismatch repair protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 597 Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 183/595 (30%), Positives = 297/595 (49%), Gaps = 7/595 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LS ++INQIAAGE+IE +KEL+ENS+DA +++V+ GG S +ITDNG Sbjct: 7 KIQELSPELINQIAAGEVIESAHSVVKELMENSMDASATQVDVESKDGGLSLLRITDNGT 66 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A++RH TSKI D D ++ ++GFRGEAL SI +VS LTL S + T Sbjct: 67 GIEPEDLEPALKRHATSKIQDYKDLESVLSYGFRGEALASIASVSRLTLESGTKEQKTAW 126 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + KIS + GT + V +LFF P R FLKS + E I D + A+A Sbjct: 127 KTRSVAGKISEKEEIPGFIGTKILVEELFFNTPVRRKFLKSIRSEDKKIRDRVTTQALAR 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V F + + T N ERI + GE+F ++ +E++ + I GY Sbjct: 187 EDVRFRLFQDGKEVFVL---PTRENKKERIIDLFGENFRDHLLEVSLERGGIQATGYISD 243 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F + N ++FINGR ++ K+ ++ AY E +P +P L EIDP +VDVNV Sbjct: 244 PDFYKSNRTGQFIFINGRPIEIKYSSVLLKKAYDELLPPNGHPYCFLFFEIDPSRVDVNV 303 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK IRF + F + IQK + + L K+++ + ++ + + Sbjct: 304 HPAKREIRFLDEDGFNGFFLALIQKELRSSTPVSFLELKKRLLKPAPETHSTTSFYQARS 363 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + + L P S E + + + + + +I+ Sbjct: 364 SGKNPLLGRELFSGVSKQEGFELDRMGPGVSLSELTDERVKHSSFVPKKHFGVLFETFIL 423 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ DG I+DQH AHER+ +E++ + Q LLTP ID+ + E I+ ++ Sbjct: 424 AEAEDGFYIIDQHTAHERIRYEEVLRKLEKRNYGIQPLLTPIRIDVSKQEQEDILNRKKE 483 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 +GI + G ++I +REIPA + +++ D ++ + + + + Sbjct: 484 YEEVGIFLDPLGEDSIVLREIPAYMEPGQEKEIVLDFLN--RTEGKETSEPELYDLMAKC 541 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC +I+ G ++ + +L + N S+C HGRPT +KL D+E++F R Sbjct: 542 VACRSAIKKGDQLSDPILAEILNRLSYCENPSRCPHGRPTLVKLSRDDLERMFHR 596 >gi|312143590|ref|YP_003995036.1| DNA mismatch repair protein MutL [Halanaerobium sp. 'sapolanicus'] gi|311904241|gb|ADQ14682.1| DNA mismatch repair protein MutL [Halanaerobium sp. 'sapolanicus'] Length = 612 Score = 478 bits (1229), Expect = e-132, Method: Composition-based stats. Identities = 180/612 (29%), Positives = 316/612 (51%), Gaps = 23/612 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L + + NQI+AGE++ERP+ +KELIENS+DA + +E + GGK F ++ D+G G Sbjct: 4 IKQLPQNVANQISAGEVVERPASIVKELIENSIDAGAKNIEVRVKEGGKKFIKVKDDGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+I A R+ TSKI D D ++++ GFRGEAL SI +V+ + ++SR G + Sbjct: 64 ILPEDIKAAFNRYATSKIKDIDDLYSLYSLGFRGEALASIASVAEVEMLSRHKSKENGVK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G ++ +P A GT V+VRDLF+ PAR +LK+ E + I ++ A+A Sbjct: 124 IRLKGGEVIENKPAASTIGTEVKVRDLFYNTPARYKYLKTTSTEFSHIIRIVNAEAVANN 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF ++ NG + I + GE+ +N + ++ + I L GY P Sbjct: 184 EISFKLYHNNK---QLLSTPGNGKLKDCIYALYGEEIADNLLAIDIEDRYIKLSGYIARP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + F NGR + + + AY++ I GR P+V L ++I+P VDVNVH Sbjct: 241 EKTRAGRSHELFFANGRPIHNNLAAKAVENAYSKLIDPGRKPIVFLFIKINPILVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--------------FH 346 P K ++F II + I + ++K + +T L+ S F Sbjct: 301 PTKKEVKFSRSQIIYDVISKGVRKTLKAADPTTRIKLNSSNDSKDNEVNTAPVYEKQVFK 360 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTYSEDNDPVEESEAT 402 + K + N K +E + + N + + + + +++ Sbjct: 361 EQGRLKNISDQKKNMPFNKSRKHSAEELQKNINYSEKKEGLKEQFAEDVNREYLINNKSA 420 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 AQI +Y++ +T +GL I+DQH AHER+++EK+ ++++ +Q+LL P Sbjct: 421 KEDKFKFLAQIFNSYLLIETPEGLKIIDQHNAHERILYEKLYKEYDEKNTATQSLLIPVK 480 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 I+L E L+ E+ + LGI FG N I I+E+P +L K+ ++ ++I E+ + Sbjct: 481 IELTAEEKQLVDEYKQSFQELGIDFSEFGKNTILIQEVPVLLKNKSTRNIIEELIAELAE 540 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 T + + + ++ +AC ++++G+ + + E R+++E+ ++ N +C H RP I Sbjct: 541 EGKTKSAAEMQKTMIEYLACRTAVKAGQPLNNQESLRIIKELFESENPYRCPHSRPVMIN 600 Query: 583 LKLSDIEKLFGR 594 + +IEK GR Sbjct: 601 ISREEIEKGIGR 612 >gi|256419867|ref|YP_003120520.1| DNA mismatch repair protein MutL [Chitinophaga pinensis DSM 2588] gi|256034775|gb|ACU58319.1| DNA mismatch repair protein MutL [Chitinophaga pinensis DSM 2588] Length = 630 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 186/631 (29%), Positives = 311/631 (49%), Gaps = 45/631 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RP+ A+KEL+EN++DA ++ ++ +I GK Q+ DNG G Sbjct: 5 INLLPDNIANQIAAGEVIQRPASAVKELLENAVDAGATEIQLIIRDAGKELVQVIDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + M +RH TSKI +D +I T GFRGEAL SI AVS + L +R + G Sbjct: 65 MSETDARMCFERHATSKIQTINDLFSIRTMGFRGEALASIAAVSQVELKTRLRGSEIGTY 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I + GT + +++LFF +PAR NFLKS E I D R+A+A+P Sbjct: 125 IEIDNSAVKKQEMCQTAEGTSIAMKNLFFNVPARRNFLKSNAAEMRHIVDEFIRVAMAFP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++ FT + + F G+ +RI ++G+ + V + E ++ + + G+ G P Sbjct: 185 QIQFTLTNN----TQQLFYLEKGSLKQRIIAILGQHYNARIVSVKETTDYMNVHGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + F+N R ++ ++ I A+AE IP +P+ VL +++DP VD+NVH Sbjct: 241 ETAKKTRGDQFFFVNNRFIKSPYLHHAIMNAFAEMIPADSFPLYVLFIDLDPGHVDINVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K I+F + ++ F+ +++ A+ + I+ + + + A Sbjct: 301 PTKQEIKFDDEKLMYAFVQSAVKHALAQFNITPTLDFGLDPGIQQLDAVSKPFTEQQQAK 360 Query: 361 SLTNTQEKLFLQENRLSTNDLLPS----------------------------DDPTYSED 392 S+ + K F Q N+ T D + + +Y+ Sbjct: 361 SVNTSLYKSFTQANQAHTIDKSSNLKHWKDLYGSGESNVTYTETETETMDSPQEESYTTH 420 Query: 393 NDPVEESEATHYQLGIACA----------QIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 + +E + + Q+HQ YI+SQ G +++DQ AAHER+++E+ Sbjct: 421 STTIESRSSATSMIDEGWQDTSIDQKVPVQVHQQYILSQIKSGFILIDQQAAHERILYER 480 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 ++ T I +Q L P+ + LL + ALIME DL LG E FG N +R PA Sbjct: 481 YQRAVQETAIPTQQSLFPQTLQLLPADAALIMEMIPDLQILGYDLEPFGNNTFVVRGTPA 540 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 + N + ++++ S L R E ++ +MA SI++G+ + + EM ++ Sbjct: 541 DIQSGNEQASIEGLLEQFKHFSHELKLP-RREQLIRSMARNNSIQAGKSLSTREMQNIID 599 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E+ + G+ T+I KL+D+ K+FG Sbjct: 600 ELFACTMPNSSPGGKYTYISFKLTDLAKMFG 630 >gi|312898808|ref|ZP_07758196.1| DNA mismatch repair protein [Megasphaera micronuciformis F0359] gi|310619970|gb|EFQ03542.1| DNA mismatch repair protein [Megasphaera micronuciformis F0359] Length = 627 Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats. Identities = 178/628 (28%), Positives = 289/628 (46%), Gaps = 42/628 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L EK N+IAAGE++ERPS IKEL EN+LDA ++ VE IA GG S+ +++DNG G Sbjct: 5 IHVLDEKTANKIAAGEVVERPSSVIKELTENALDAGATTVEIEIADGGSSYMRVSDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ E+ ++ RH TSKIS +D +I + GFRGEA+PSI AVS L + +R + + Sbjct: 65 MSEEDAKKSIIRHGTSKISSIEDIFSITSLGFRGEAVPSIAAVSELVMTTRMNDTDLAFR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + +SG + + GT +EVR+LFF PAR F+KSE+ E++ I+D+I ++A+ P Sbjct: 125 MVLSGGSVKEEEHTGASVGTTMEVRNLFFNTPARKKFMKSERTESSKISDIITKLALTRP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+FTF + G+ E I+ + G + ++ T+ G+ G P Sbjct: 185 DVAFTFINNGRTVLQ---TGGTGDDLETIAAIYGAAVAKEVFPVTYENENFTIHGFVGKP 241 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + +N R + + + I AY +P YP +L +E DP +DVNVH Sbjct: 242 SLLKSTRAWQTCIVNRRVIHNAVVFKAIENAYHAMLPKSGYPFALLYVETDPATIDVNVH 301 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK+ I+F + + + I A+ + + + + P + Sbjct: 302 PAKTEIKFADEQQMYRAVYHCIIMALMSREKPEQIATPVNLSTRQIEKAVPAKEVENRQG 361 Query: 361 SLT----------------------------NTQEKLFLQENRLSTNDLLPSDDPTY--- 389 S T Q+K + E + + + Sbjct: 362 SFTFSTPRDGGFSTEGRKNNGGSLEHGYVPVQRQDKPYTPEPHVKAYAAGEENPFSAVRE 421 Query: 390 ---SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 + + I + YI+++ + L I+DQHAAHER+ ++K Sbjct: 422 ELSESMKEHSVIHFDGDEDVFIPLGAVADCYIVAKKGEDLYIIDQHAAHERVRYDKF--C 479 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 + + SQ LLT E ++ + L E +E LG GP + + IPA L Sbjct: 480 KRTESMPSQQLLTAEFVEADSSDMQLFSEKEEVFRDLGYIYTEAGPTTLRMEAIPADLPT 539 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 +I L++I + +S T + LA ++C+G++++G + EM LL + Sbjct: 540 SHIADSLQEICHILHESPQTDKA-TLRHSSLAYLSCHGAVKAGDTLNIREMKELLEALFH 598 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP ++ ++ KLF R Sbjct: 599 TETPYVCPHGRPIIVRFTPDELAKLFKR 626 >gi|283768572|ref|ZP_06341484.1| DNA mismatch repair protein, C-terminal domain protein [Bulleidia extructa W1219] gi|283104964|gb|EFC06336.1| DNA mismatch repair protein, C-terminal domain protein [Bulleidia extructa W1219] Length = 577 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 195/596 (32%), Positives = 301/596 (50%), Gaps = 24/596 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++L I N IAAGE++ERPS +KELIEN++DA+S++++ I GG ++ DNG Sbjct: 3 RIKQLEAHIANMIAAGEVVERPSGVVKELIENAIDAQSTKIKISIEEGGIQRIRVEDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E++ +RH TSKI D +IH+ GFRGEALPSI +VS ++L+S G Sbjct: 63 GMDKEDVVNCFKRHATSKIFKEADLWSIHSLGFRGEALPSIASVSKVSLIS--HNGEKGH 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I ++ N GT + V LF+ PARL ++S ET+L+ VI + A+AY Sbjct: 121 RIMIQYGIQKAIESYPANQGTDITVEGLFYQTPARLKHMRSAAYETSLVLSVIHKFALAY 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SFTF + ++ + +GN E I V G N V + + ++GY Sbjct: 181 PEISFTFISDDKVSFQ---TTGSGNLKEVIFLVYGRSVAENLVPFEFRDQDFYVRGYGVK 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N ++F NGR V+ + ++ Y + I GRYP+VVL +E+DP +DVNV Sbjct: 238 PLITRSARNHIHLFFNGRMVRQYRLDQAVQHGYEDFIVKGRYPIVVLSMELDPHLIDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP+K IR + I I+KA+ ++ ++ P Sbjct: 298 HPSKWEIRLSKLANLEALIENGIRKALMGDRLAPEIETGVSRQEVYYTQTQMDLKTP--- 354 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDD-PTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 +QEN++ N + + T+ + +P+ E T Q+H +I Sbjct: 355 -----------IQENKVEWNSQPTAQESFTFPKQEEPIYEERKTTLPQMQVIGQLHDKFI 403 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + +GL I+DQHAA ER+ FE+ Q N + Q LL P ++ + E +E Sbjct: 404 LCAYEEGLAILDQHAAQERVHFEEYVQKLNQNP-SMQDLLVPMMLHSDRTVVERVQEVNE 462 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L L I E FG N+ +R IP L + + L+D++D + + ++I A Sbjct: 463 ALKDLHITLEPFGENSFVLRTIPIWLKELEMEPFLQDVLDGFKNDQEIKYTRLERKHI-A 521 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T+AC+ SIR R + EM ++R++ N C HGRPT I LK ++ K F R Sbjct: 522 TLACHHSIRFNRSLTVEEMKEVVRQLYTCENPYHCPHGRPTIIFLKEKELVKEFYR 577 >gi|297588420|ref|ZP_06947063.1| DNA mismatch repair protein HexB [Finegoldia magna ATCC 53516] gi|297573793|gb|EFH92514.1| DNA mismatch repair protein HexB [Finegoldia magna ATCC 53516] Length = 627 Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 186/629 (29%), Positives = 302/629 (48%), Gaps = 42/629 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LSE I +IAAGE+IERP IKEL+ENS+DA S + I GGK F ++DNG G Sbjct: 2 IKLLSEDTIQKIAAGEVIERPVSVIKELVENSIDAGSDTIVVEIKNGGKDFISVSDNGSG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + EI +A +RH TSK+ DD +I T GFRGEAL SI AVS L++ +R G + Sbjct: 62 IEKNEIELAFKRHSTSKLEKFDDLYDIRTLGFRGEALASILAVSKLSVSTRTKSEKIGKK 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + K+ S VAMN GT + ++DLF+ +P R F+K++Q E NLIT + + AI Sbjct: 122 VEFRNSKVISESDVAMNVGTKIVIKDLFYNVPVRKKFMKTDQTEANLITTTMYKFAICNT 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 VS + ++ N + E I + G NN ++++ S + + GY Sbjct: 182 DVSIKYIKDNKTLFETK---KNSSIRENIINLFGTSMSNNLLDIDINSRDYKIHGYISNN 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N Y+F+NGR V+ + I +T+ + Y IP GR+P+ L EI+P+ VDVNVH Sbjct: 239 NLYRANRQMQYIFLNGRFVKSEDIRNTVESNYKSVIPNGRFPLFWLFFEINPKLVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMISSFHQDNAP------ 351 P K ++ I + + ++ + + S+ + ++ Sbjct: 299 PNKQKVKISIIDEILEELNKKVRFLLENNASIANISQSIPDEDKYKDLRRNYFESDSNLT 358 Query: 352 -----KTHLPKYATSLTNTQEKLF-------------------LQENRLSTNDLLPSDDP 387 K P ++ +L N KL E+ N ++ ++ Sbjct: 359 NYKYDKVSEPTFSYNLFNDNSKLSNFRNIKYNDKSEDIIRNPKTTEDFFGGNKIVNQNNL 418 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIIS--QTTDGLVIVDQHAAHERLIFEKMRQ 445 + ES Y + + Y+++ + + + DQHA HER+ +EK+ + Sbjct: 419 FNKDSEQIKVESSLKKYDKFDILTVLFKTYVLAKDEFDSKIYLFDQHACHERINYEKLTK 478 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 ++ SQ L P I L + + + + LG +++ F +++ IR +P + Sbjct: 479 QMQDKEVVSQNLAFPVNISLTDDLMEIYVNNKNIFEELGYESDVFSDDSVVIRAVPYLFG 538 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 N L DI+D I + D IE+ + +C S+++G + + E+ +LL ++ Sbjct: 539 NSNAEFLFTDILDTIA--KNSNDPFDVIESKVIKRSCKMSVKAGDTLSNFEIIKLLEDLF 596 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 K C HGRPTFI++ D+EK+F R Sbjct: 597 KCEYPLTCPHGRPTFIEMNEKDLEKMFMR 625 >gi|254672433|emb|CBA05801.1| DNA mismatch repair protein MutL [Neisseria meningitidis alpha275] Length = 631 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 197/632 (31%), Positives = 318/632 (50%), Gaps = 69/632 (10%) Query: 28 KELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFS 85 KE++ENS+DA ++ ++ + GGG ++DNG G+ ++I +A+ RH TSKI +D Sbjct: 2 KEIVENSIDAGATAIDVELDGGGIRLIHVSDNGGGIHPDDIELALHRHATSKIKTLNDLE 61 Query: 86 NIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVR 145 ++ + GFRGE L SI +VS LTL SR ++ Q+ K+SS GT +E Sbjct: 62 HVASMGFRGEGLASIASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAATHPVGTTIEAA 121 Query: 146 DLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNF 205 +LFF PAR FLKSE E ++ R+A+A+P ++F+ +K+ QS Sbjct: 122 ELFFNTPARRKFLKSENTEYAHCATMLERLALAHPHIAFSLKRDGKQVFKLPAQS----L 177 Query: 206 PERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFIL 265 ERI+ ++G+DF ++E++ S + L G PTF +G ++ Y F+N R V+DK +L Sbjct: 178 HERIAAIVGDDFQTASLEIDSGSGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVML 237 Query: 266 STIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKA 325 ++ AY + + P VL L++ P VDVNVHP K+ IRFR+ + + ++ KA Sbjct: 238 HAVKQAYRDVLHNALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKA 297 Query: 326 INK------------------------------------KGISTSSVLSKKMISSFHQDN 349 + ++ K + + Sbjct: 298 LADTRANLTESVGNAGEVLHDITGVVSTPMPSENDSENLFDSVSNYPTGNKSDTHNAFGS 357 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT-----------YSEDNDPVEE 398 + KT Y ++ Q L L+E+R + N T + + E Sbjct: 358 SGKTAPMPYQSAYAPQQRSLSLRESRAAMNTYAELYKKTDDIDLELSRFEQARFGNMPSE 417 Query: 399 SEATHYQL---------------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + A G A AQ+ YI++Q D L+++D HAA ER+ +EKM Sbjct: 418 TPAPQTDTPLSDGIPSQSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKM 477 Query: 444 RQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 ++ + SQ LL P ECA + +H + L G++ G N +A+R +PA Sbjct: 478 KRQRQENGRLQSQRLLIPVTFAASHEECAALADHADALAGFGLELSDMGGNTLAVRTVPA 537 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 +L K ++ L +D++ E+ ++ T+++ ILATM+C+GS+R+GR++ EMN LLR Sbjct: 538 MLGKADVVSLAKDVLGELAQVGSSQTIEEHENRILATMSCHGSVRAGRRLTLPEMNALLR 597 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +ME P S+QCNHGRPT++KL L +++ LF R Sbjct: 598 DMENTPRSNQCNHGRPTWVKLTLKELDALFLR 629 >gi|163756800|ref|ZP_02163909.1| DNA mismatch repair protein [Kordia algicida OT-1] gi|161323189|gb|EDP94529.1| DNA mismatch repair protein [Kordia algicida OT-1] Length = 620 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 158/621 (25%), Positives = 303/621 (48%), Gaps = 37/621 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + NQIAAGE+++RP+ +KEL+EN++DA+++ ++ ++ GK+ + DNGFG Sbjct: 5 IRLLPDHVANQIAAGEVVQRPASVVKELLENAIDAKATEIKLIVKEAGKTLIHVIDNGFG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI ++D N++T GFRGEAL SI A++H+ L ++ + G + Sbjct: 65 MSETDARLSFERHATSKIQAAEDLFNLNTKGFRGEALASIAAIAHVELQTKKEADELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G K+ + + GT + V++LF+ IPAR NFLKS+ VE I D +R+A+A+P Sbjct: 125 IKIEGSKLITQEVITTPTGTSIAVKNLFYNIPARRNFLKSDAVELRHIIDEFQRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F + + + N+ +RI ++G V + E ++ + + G+ G P Sbjct: 185 DIGFVLYHNGNELFNLP----KSNYRQRIVNILGGKTNEKLVPIQEDTDIVKISGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + N+ + F+N R ++ ++ I A+ + P + LE+ P +D+N+H Sbjct: 241 EFAKKSRNEQFFFVNNRFIKSPYLHHAINAAFEGLLKEKMQPSYFIYLEVHPETIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK-------- 352 P K+ I+F + + + +++ ++ + I+ + D K Sbjct: 301 PTKTEIKFDDEHSLYAMLRATVKHSLGQFNIAPVLDFDRDANLDTPYDYKNKQAAVPNIQ 360 Query: 353 ---------------------THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 Y T E L++ S ++ +++ + E Sbjct: 361 VDRSFNPFADEKKTAGNTTTQPRYTNYKKESTEGWESLYVGLESKSNSNQFSTENIEF-E 419 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 + Q+H+ YI+S G+VI+DQH AH+R+++E++ ++ ++ Sbjct: 420 SEEMTSSLFTNEEPRETLTYQLHRKYIVSSIKSGIVIIDQHRAHQRVLYEQLLRNITVSE 479 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 SQ LL P E AL+ E E L +G + I + IP+ +S+ + Sbjct: 480 AVSQQLLFPVTFTFSTSEIALLKEVKESLENIGFMFSNITNDTIELSGIPSNISESELQI 539 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 ++ ++++ T + + ++ ++A +IR+G+K++ E L+ + + Sbjct: 540 IIEQMLNDF-QGEIPDTGFSQTDVLVKSLAKSMAIRTGKKLEVEEQESLVNNLFACKEPN 598 Query: 572 QCNHGRPTFIKLKLSDIEKLF 592 R FI L + D++K F Sbjct: 599 VSPFNRTIFITLSVDDLDKKF 619 >gi|158320585|ref|YP_001513092.1| DNA mismatch repair protein MutL [Alkaliphilus oremlandii OhILAs] gi|158140784|gb|ABW19096.1| DNA mismatch repair protein MutL [Alkaliphilus oremlandii OhILAs] Length = 616 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 206/616 (33%), Positives = 333/616 (54%), Gaps = 30/616 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + IN+IAAGE++E P +KEL+EN++DA SS + I GGK + +ITDNG G Sbjct: 5 IRLLDDLTINKIAAGEVVESPHSVVKELVENAIDAASSAIILEIQEGGKKYIRITDNGVG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E + A RH TSKI+ +D S + + GFRGEAL SI AV+ + +++RP G Sbjct: 65 IKEEYVEAAFMRHSTSKIAHIEDLSRVESLGFRGEALASIAAVAQVEMITRPEGQQHGVL 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I+G K+ +++ V GT + V++LFF PARL FLKS ET IT++I R++++ P Sbjct: 125 IHINGGKVETIKKVGCPVGTTIIVKNLFFNTPARLKFLKSNNGETMKITEIITRLSLSNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF + + + N + I V ++ N + L + +TL GY G P Sbjct: 185 SISFKYINNNNIMFT---TPGNNMLSQAILSVFNKETFKNLILLEDHQEGMTLHGYIGQP 241 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +F RGN N VFINGR V++K I I AY E I + +YP+ +L L+I P +DVNVH Sbjct: 242 SFVRGNRNLQIVFINGRYVKNKVISRAIEVAYKEKIMINKYPICILNLKIHPSVLDVNVH 301 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS--------SVLSKKMISSFHQDNAPK 352 PAK ++F + + +FI+++I KA+ K+ I + ++ K+ + K Sbjct: 302 PAKIEVKFEDEEKVYHFILKAILKALEKQSIVPNMLELAPRTNIDKKQPQRQILKVVEEK 361 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTN------------DLLPSDDPTYSEDNDPVEESE 400 SL + Q+++ +QE + + + +++ S ++ + +S Sbjct: 362 QEDIVIGKSLASIQDQMSVQETKENYSKNLDFTSLKTPVEIVEEQIQIASVEDHNIVQSS 421 Query: 401 ATHYQLGIA--CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 + L QI YII + + ++DQHAAHERL++ RQ+ + K+ SQ LL Sbjct: 422 FLNSLLDRYHIVGQIFSTYIILENEGSMYLIDQHAAHERLLYNTFRQEIKAEKVASQRLL 481 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P +++L + + ++ H +LG + E FG N I IR++P IL + + +I+D Sbjct: 482 APMVLELSKEDYMFLLNHLYIFEKLGFEIENFGGNDIIIRQVPMILGRPQNFSFIYEILD 541 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 E+ + + E+ +A AC +I++ KM SIE+ +L+ ++ K C HGRP Sbjct: 542 EVRKYN---DVNAMFEDTIAKKACKEAIKANDKMDSIEIRKLIEDLSKLTPPLTCPHGRP 598 Query: 579 TFIKLKLSDIEKLFGR 594 + ++ +IEK F R Sbjct: 599 IILAMQKYEIEKHFKR 614 >gi|313884229|ref|ZP_07817995.1| DNA mismatch repair protein, C-terminal domain protein [Eremococcus coleocola ACS-139-V-Col8] gi|312620676|gb|EFR32099.1| DNA mismatch repair protein, C-terminal domain protein [Eremococcus coleocola ACS-139-V-Col8] Length = 656 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 173/648 (26%), Positives = 290/648 (44%), Gaps = 60/648 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+++ + NQIAAGE++ERP+ +KEL+ENS+DA +S + + G S + DNG Sbjct: 3 KIKQMPAALSNQIAAGEVVERPASVVKELVENSIDAGASIISVYLEEAGISQIMVQDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +E++ +A H TSKI +D N+H+ GFRGEAL SIG+V+ + + S + Sbjct: 63 GMDAEDLQLAFLPHATSKIYRLNDLFNVHSLGFRGEALASIGSVAKVRVESCQAGQDQAN 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I+G K+ + A N GT +EV+ LF+ PARL LK+ Q E I ++ MA+AY Sbjct: 123 FVEIAGSKLMNQGQCAGNQGTKIEVKSLFYNTPARLKHLKTLQTELKHIIRFVQNMALAY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ F+ + K+ S G E I+Q+ + + LN ++ + G+ Sbjct: 183 PQIQFSLFNN---QQKLFQTSGRGRLQESIAQIYQANLARQLIALNVADDDFKVSGFISP 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT R + N + F+NGR V + + AY + +GRYP+ +L++++DPR VD NV Sbjct: 240 PTLTRTSRNYIHWFVNGRAVYSNQLNQVLIKAYGRQLMIGRYPISILVIDLDPRLVDANV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS------------------------- 334 HP K +R + + I ++ + + + Sbjct: 300 HPTKQTVRLSKESELAKLIQDGVKACLGEVNPVPNLGQTLVAQDNYRLSERTIPLDLNGS 359 Query: 335 -----SVLSKKMISS----------FHQDNAPKTHLPKYAT-------------SLTNTQ 366 S + Q+N K + Y S N Q Sbjct: 360 IGKVDSNFQHQQDPDQVDQEVENKLVRQENCSKPPMSHYQALEQALGIDRENSCSQGNDQ 419 Query: 367 EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +L S+ SE + E + + QIH Y+I+++ G Sbjct: 420 RHPTRALPDSNFKAVLDSEIQQSSEVYERETEKQGIDFAALRYVGQIHGTYLIAESESGF 479 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++DQHAA ERL +E + LL + + I L +LGI Sbjct: 480 YLIDQHAAQERLRYEHFMTYDPDVTLQQDLLLPHV-FEFSLEQMTTIEIIKPSLEKLGIF 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E GPN+ + P + +++ L+ ++D ++ T+ E + +C G+I Sbjct: 539 LENLGPNSYQLPSYPNWILDEDLDDLIYGLVDRLLKEPD-LTVAQLKEASIIMSSCRGAI 597 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + E L+++M + C HGRP F++ +EK+F R Sbjct: 598 KANHYLAPKEAEALIKDMAHLEDPYHCPHGRPVFVEFDQKSLEKIFKR 645 >gi|169824441|ref|YP_001692052.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328] gi|167831246|dbj|BAG08162.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328] Length = 627 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 188/629 (29%), Positives = 304/629 (48%), Gaps = 42/629 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LSE I +IAAGE+IERP IKEL+ENS+DA S + I GGK + ++DNG G Sbjct: 2 IKLLSEDTIQKIAAGEVIERPVSVIKELVENSIDAGSDTIIVEIKNGGKDYISVSDNGLG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + EI +A +RH TSK+ DD +I T GFRGEAL SI AVS L + +R G + Sbjct: 62 IEKNEIELAFKRHSTSKLEKFDDLYDIRTLGFRGEALASILAVSKLIVSTRTKSEKIGKK 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + K+ + VAMN GT + ++DLF+ +P R F+KS+Q E NLIT + + AI Sbjct: 122 VEFRNSKVINESDVAMNVGTKIVIKDLFYNVPVRKKFMKSDQTEANLITTTMYKFAICNT 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 VS + ++ N + E I + G NN ++++ S++ + GY Sbjct: 182 DVSIKYIKDNKTLFETK---KNSSIKENIINLFGTSMSNNLIDIDISSHDYKIHGYISNN 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N Y+F+NGR ++ + I +T+ + Y IP GR+ + L EI+P+ VDVNVH Sbjct: 239 NLYRANRQMQYIFLNGRFIKSEDIRNTVESNYKSVIPNGRFTLFWLFFEINPKLVDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAIN---KKGISTSSVLSKKMISSFHQDNAP------ 351 P K ++ I + + ++ + K + S+ ++ Sbjct: 299 PNKQKVKISILDEILEQLNKRVRFLLENNVKITNISQSIPDDDKYKDLRRNYFESDSNLT 358 Query: 352 -----KTHLPKYATSLTNTQEKLFLQEN------------RLSTNDLLPSDDPTYSEDND 394 K P Y+ +L N KL N + TN + +DN Sbjct: 359 NYKYDKVSEPTYSYNLFNDNSKLSNLRNIRYKDESEAFNKKPETNKYFFKEKDVAKQDNF 418 Query: 395 PVEESEAT-------HYQLGIACAQIHQNYIIS--QTTDGLVIVDQHAAHERLIFEKMRQ 445 ++E+E Y+ + + YI++ + + + DQHA HER+ +EK+ + Sbjct: 419 FLDENEQIKVESYLAKYEKFDILTVLFKTYILAKDEYDSKIYLFDQHACHERINYEKLTK 478 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 ++ SQ L P I L + + + LG +++ F +++ +R +P + Sbjct: 479 QMLDKEVVSQNLAFPINISLTDELMEIYTNNKSIFEELGYESDVFSDDSVVVRAVPYLFG 538 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 N L DI+D I + D IE+ + +C S+++G + + E+ +LL ++ Sbjct: 539 NSNAEFLFTDILDTIA--KNSNDPFDVIESKVIKRSCKMSVKAGDTLSNFEIIKLLEDLF 596 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 K C HGRPTFI++ D+EK+F R Sbjct: 597 KCEYPLTCPHGRPTFIEMNEKDLEKMFMR 625 >gi|320526785|ref|ZP_08027975.1| DNA mismatch repair protein [Solobacterium moorei F0204] gi|320132753|gb|EFW25293.1| DNA mismatch repair protein [Solobacterium moorei F0204] Length = 609 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 173/614 (28%), Positives = 290/614 (47%), Gaps = 28/614 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L N IAAGE++ERP +KEL+EN++DA S+R+E I GG + DNG Sbjct: 3 KIKQLDTLTANMIAAGEVVERPMGVVKELVENAIDAGSTRIEVNITEGGIQRLSVIDNGC 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +++ + RH TSKI D +IHT GFRGEALPSI +VS + L + Sbjct: 63 GMDAQDAQLCFGRHATSKIQSQNDLWSIHTLGFRGEALPSISSVSRMVLST--SDGKDAT 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ++ + SV P N GT + V LF+ PARL ++S E +LI D++ + A+++ Sbjct: 121 KVVVAYGNVESVAPYPCNQGTEISVEGLFYQTPARLKHMRSAAYEASLIQDIVSKFALSH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++F + ++ S GN E + QV G NA+ ++ + T++GY Sbjct: 181 PEIAFILRSDDRESFR---TSGQGNLLEVVYQVFGRMAAENAIPVDFSDFDYTVKGYLIK 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ R + +F+NGR V+ + ++ Y + I GRYP+ VL + +DP +DVNV Sbjct: 238 PSITRASRTGMNLFLNGRMVRTYKLYKAVQDGYEDFIVKGRYPICVLDISMDPHLLDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP+K +R + I ++ + ++ ++ + + + + L + A Sbjct: 298 HPSKWEVRLSKEIQLETLIKNNVANMLRGTILAPAAEVREARQEYYQPISFDTDRLIQEA 357 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE-------------------ESE 400 Q + + E ST + + + + E + + Sbjct: 358 EYRKEQQRRQSIVEQVASTPQEEKVEKQEVTLEQEIAETEAELKRVSTQFEEEYPEYKPQ 417 Query: 401 ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 + Q+H+ +I+ GLVI+DQHAA ER+ +E+ + N + L P Sbjct: 418 QQVFPPMEVIGQLHEKFILCAAEKGLVIIDQHAAQERVHYEEYKAKLNQDPV-MMDCLVP 476 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 I + E + + + + E FG + + + +P + Q L D+ID + Sbjct: 477 ITIHAGNDLVRRVEEINAAVEDIHVVFEPFGKDTLVVHSVPVWMQDIEEIQFLNDVID-L 535 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + + +ATMAC+ SIR R + EM ++R++ N C HGRPTF Sbjct: 536 FKNDRDIKYARMEKKKIATMACHHSIRFNRSLTMDEMKEVVRQLSLCENPYHCPHGRPTF 595 Query: 581 IKLKLSDIEKLFGR 594 I L + K F R Sbjct: 596 ITLDEKTLVKEFLR 609 >gi|282880888|ref|ZP_06289581.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella timonensis CRIS 5C-B1] gi|281305270|gb|EFA97337.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella timonensis CRIS 5C-B1] Length = 604 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 160/612 (26%), Positives = 298/612 (48%), Gaps = 32/612 (5%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 MK I+ L + + NQIAAGE+I+RP+ IKEL+EN++DA +S ++ ++ G++ Q+ D Sbjct: 1 MKDIIQLLPDVVANQIAAGEVIQRPASVIKELVENAVDAGASAIDVLVVEAGRTSIQVID 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG GM+ + +A +RH TSKI +D + T GFRGEAL SI AV+ + L +R ++ Sbjct: 61 NGKGMSGTDARLAFERHATSKIRQAEDLFALQTMGFRGEALASIAAVAQIELKTRREDDD 120 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G + I+G K+ P A G+ V++LF+ +PAR FLKS E I +R+A Sbjct: 121 LGTSLTIAGSKVKGQEPCACPTGSNFLVQNLFYNVPARRRFLKSNTTELKHIVTAFQRIA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + YP+++FT + + + +RI + G+ + + ++ + + G+ Sbjct: 181 LVYPQIAFTLHSNGTELLNLRPCV----LRQRIVDIFGKRINQDLLPVSVDTTMCKISGF 236 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 G P ++ Q Y F+NGR ++ + + A+ IP G + E++P+++D Sbjct: 237 VGKPESSKKKGVQQYFFVNGRYMRHPYFHKAVLNAFERLIPQGDQVPYFIYFELNPQEID 296 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF----------- 345 VN+HP K+ I+F N I + ++++A+ S + + Sbjct: 297 VNIHPTKTEIKFENEQAIFQIVFAAVREAVGLFKEVPSIEFNNEGQPDIPVYSGHRDATA 356 Query: 346 ------HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 + + P + ++ EKL+ + N L + D + + E Sbjct: 357 APHVQTNPNYNPFQQTSIPSPHASSDWEKLYEGLEQTPENIALFNSDGIEQNVQNSLIEE 416 Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 ++ + Q Y+++ GL+I+DQH AH R+++E+ Q K +Q +L Sbjct: 417 KSPVHY------QYKGQYLMTAVKSGLMIIDQHRAHVRILYERYLQQMKEGKEYAQKVLF 470 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 PE+I L E + + DL +G + G + AI+ +PA + ++ QL+ D++ Sbjct: 471 PELIQLSPAEQIIFPKMMPDLAAMGFEFTSMGKSDYAIQSVPAGIEGLDMVQLVHDMLSS 530 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 ++ + + + + + ++A + +I +G+ + + EM L+ + N + G+ Sbjct: 531 ALEKD-SNAVHEIHQALALSLAKHAAIPTGQVLNNEEMENLINSLFGCQNVNYTPDGKSI 589 Query: 580 FIKLKLSDIEKL 591 LK IE+L Sbjct: 590 LHILKQEKIEQL 601 >gi|153004950|ref|YP_001379275.1| DNA mismatch repair protein [Anaeromyxobacter sp. Fw109-5] gi|189030389|sp|A7HC45|MUTL_ANADF RecName: Full=DNA mismatch repair protein mutL gi|152028523|gb|ABS26291.1| DNA mismatch repair protein MutL [Anaeromyxobacter sp. Fw109-5] Length = 601 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 169/601 (28%), Positives = 304/601 (50%), Gaps = 11/601 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++NQIAAGE++ERP+ +KEL+EN+LDA ++ V + GG + ++ D+G Sbjct: 3 RIQVLPPGLVNQIAAGEVVERPASVVKELVENALDAGATSVSIDVEEGGLALVRVADDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM++++ +A++RH TSK+ D + I T GFRGEALP+I +V+ L + P ++ G Sbjct: 63 GMSADDAQLALERHATSKLRDAEGLAAIATMGFRGEALPAIASVARFRLDTAPAEDGAGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G S PVA GT +EVRDLFF PAR F+++ E+ +T+ + R+A+A Sbjct: 123 RVEVEGGGRPSSGPVARPRGTTIEVRDLFFNTPARRKFMRAAATESGHVTEAVVRLALAR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V FT + + + +Q +G D + V ++ + ++G Sbjct: 183 PDVGFTLRSAGRLVLGSRAGAAAADRA---AQALGRDAHRHLVPVDAGRGNVRVRGLVCS 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + Y+F+NGR V+D+ + A+A T+P GR+P VL +E+ +VDVNV Sbjct: 240 PDHSEATGRALYLFVNGRYVRDRGAAHAVLRAFAGTLPPGRHPAGVLFVELPLDRVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RF + + + +I + P Sbjct: 300 HPQKLEVRFAEAREVYDALFHAIAGTLRTAPWLAHGRAGGSAPPGPVALTPPGGAGSDET 359 Query: 360 TSLTNTQEKLFLQENR-----LSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 ++ + E + S ++ ++ A ++ Q Sbjct: 360 AAVLAWAREAHAPEGSGALVPPPSPVPGASGTFAFAIPDEAGLARPAGYFASLRYVGQHA 419 Query: 415 QNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 + Y++ + G LV++DQHA+HERL+F+++R+ F + K+ Q L P+++ L + Sbjct: 420 RTYLLCEAQGGTLVVIDQHASHERLLFQRLREVFRTRKLPVQPFLLPQVVTLPPAVARAL 479 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 +L RLG E FG ++ A++ PA L+ ++ LL D+ ++ + + + + Sbjct: 480 EGGLPELARLGFDVEPFGGDSFAVKGAPAALAGVDLEALLLDLSAQLELVGSGTAVDEAL 539 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 ++LATMAC+ ++R+ +++ E LL ++ ++C HGRP +L L+++E+ G Sbjct: 540 HDLLATMACHAAVRANQEVAPEEARALLDGLDAIDFKARCPHGRPVVFELPLAELERRVG 599 Query: 594 R 594 R Sbjct: 600 R 600 >gi|284048548|ref|YP_003398887.1| DNA mismatch repair protein MutL [Acidaminococcus fermentans DSM 20731] gi|283952769|gb|ADB47572.1| DNA mismatch repair protein MutL [Acidaminococcus fermentans DSM 20731] Length = 662 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 183/664 (27%), Positives = 306/664 (46%), Gaps = 77/664 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K++ L + NQIAAGE++E+P+ +KEL+ENSLDA + +E I GG F ++ DNG Sbjct: 4 KVQLLDQNTSNQIAAGEVVEKPASVVKELVENSLDAGADTIEVSIFAGGTEFIRVRDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM MA+ RH TSKI +DD +HT GFRGEALPSI +VSH TL++R Sbjct: 64 GMDEANARMAILRHATSKIVKADDLLTLHTLGFRGEALPSIASVSHFTLLTREAGAEFAT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G + V + + GT + V+DLF+ +PAR FL++ E I+D++ ++A++ Sbjct: 124 RITLDGGEDMDVESMGGDVGTTITVKDLFYNVPARRKFLRTVNTEGRYISDILSKIALSR 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V + +G+ + I+ + G++ + ++ + ITL+G+ Sbjct: 184 PDVHLVLTRDDKEVIN---TPGSGDLVDTIASLYGKEVTRELLTVDYAQDGITLKGFISR 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +G +F+NGR + ++ + I AY IP +P VL + ID +D+NV Sbjct: 241 PTLLKGTRQWQTLFVNGRCINNRMVSKAIDHAYQSQIPKAGFPFAVLNIGIDTHLIDINV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------VLSKKMISSFHQDNA 350 HP KS I+F + + + + + +A+ + S +K + Sbjct: 301 HPQKSEIKFGDESAVYRAVYHGLCQALTQPMAGKSEGDGTVALAQPGFRKREPAAAGSGQ 360 Query: 351 PKTHLP----------------------KYATSLT----------------NTQEKLFLQ 372 + P YA+S + T EK F Sbjct: 361 NRGPAPEEKPLFQGGDRGYQPRTSAFGRSYASSPSGSYGQPVWKVPDAISEETTEKFFAA 420 Query: 373 ENRLS----------------TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ- 415 + R D P+ D T + +D EA L I Sbjct: 421 QRREDPVPGAEGAGEGAGIPLEEDGGPAPDGTAAPASDEALTEEARDGALSSGVDLIWPL 480 Query: 416 -----NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 +II+Q+ L ++DQHAAHER++++K +I SQ LL P +++ + Sbjct: 481 GQVDRVFIIAQSETALYLIDQHAAHERIMYDKF--IRQQQEIPSQQLLIPLFLNVTRPDV 538 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 LI E+ E+ +LG+ E G ++ + +PA + + DI+ + ++ Sbjct: 539 DLIEEYREEFLQLGVDVEPAGETSLRVSALPADVESSQAEGFIEDILKLLSENKKIKA-S 597 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 D E++L AC+ +IR+G + +M +L+ E+ + C HGRP I+L ++ Sbjct: 598 DLRESVLHYAACHSAIRAGEVLNIRQMRQLILELLNTEHPFTCPHGRPCMIQLTSDELYH 657 Query: 591 LFGR 594 +F R Sbjct: 658 MFKR 661 >gi|221633643|ref|YP_002522869.1| DNA mismatch repair protein HexB [Thermomicrobium roseum DSM 5159] gi|221156332|gb|ACM05459.1| DNA mismatch repair protein HexB [Thermomicrobium roseum DSM 5159] Length = 575 Score = 475 bits (1222), Expect = e-131, Method: Composition-based stats. Identities = 176/600 (29%), Positives = 313/600 (52%), Gaps = 32/600 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I +L E + +IAAGE++ERP+ +KEL+EN+LDAE+ + I GG+ ++ D+G Sbjct: 1 MPIVRLDEATVRRIAAGEVVERPASVVKELVENALDAEARTIRVEIVAGGRELIRVQDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+P+AV+RH TSK+ +D + + ++GFRGEAL +I AVS ++SR P G Sbjct: 61 TGIPPDELPLAVERHATSKLHRFEDLARLASYGFRGEALAAISAVSECEIVSRVPDAPYG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 A++ + + V P+ PGT+V VRDLF +PAR FL+ + E LI + +A+A Sbjct: 121 ARLLVRYGRPGRVEPIGAAPGTVVTVRDLFANVPARRRFLRQDATEAALIQRTLAALALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS-NEITLQGYT 237 P+V F + + +G+ + + V G + + L E EI +QG Sbjct: 181 RPEVRFELTNDGR---TVLATGGSGDLLDALIGVYGAETATQMLRLEEYCAGEIVVQGAV 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+P +R N +V +N R V+ + +++ I AY + +GRYP+ V+ + + +VDV Sbjct: 238 GLPRVSRPNRQALFVLVNQRWVESRTLVAAIEQAYHTLLMVGRYPIGVVAVSLPGDRVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK---GISTSSVLSKKMISSFHQDNAPKTH 354 NVHP K +RF + + + +++++ + S S + Sbjct: 298 NVHPTKREVRFADERAVAAAVYEAVRRTLLAHVPENPPPPVTFSPLSPSVVQRRLQVADP 357 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 + ++S T E+L + + D A + Q+ Sbjct: 358 TRELSSSRPGTPEELVDAPSSTRSAD-------------------SANWLPVLRVLGQVR 398 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Q YII++ DG+ ++DQHAAHER++ +++ + + Q LL P +++L + A + Sbjct: 399 QAYIIAEGPDGMYLIDQHAAHERILLDRLLAQLEARGVEQQALLEPLVLELSPVQLATVE 458 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 + + L +LG + E FG A+A+R + + +++I Q+L ++D++ T +E Sbjct: 459 RYRDALVQLGWELEPFGGAAVAVRAV-PAVVQRSIEQVLIAVLDDLAAGGRGTTP---LE 514 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + AC+ +IR+G+++ EM L+R++E+ + C HGRPT + L ++E+ F R Sbjct: 515 RVAISTACHSAIRAGQELSLPEMRELIRQLEQCRVPNACAHGRPTVVHLSTEELERQFSR 574 >gi|313892627|ref|ZP_07826214.1| DNA mismatch repair protein, C-terminal domain protein [Dialister microaerophilus UPII 345-E] gi|313119024|gb|EFR42229.1| DNA mismatch repair protein, C-terminal domain protein [Dialister microaerophilus UPII 345-E] Length = 622 Score = 475 bits (1222), Expect = e-131, Method: Composition-based stats. Identities = 183/624 (29%), Positives = 298/624 (47%), Gaps = 38/624 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L EK INQIAAGE++ERP A+KE++ENS+DA +S +E IA GG ++ ++TDNG G Sbjct: 4 IHLLDEKTINQIAAGEVVERPVNAVKEMVENSVDANASEIEVEIADGGITYIRVTDNGSG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M E+ M++ RH TSKIS D+ +I + GFRGEAL SI AVS TL +R N+ G Q Sbjct: 64 MDKEDAEMSIIRHATSKISTVDNIFHISSLGFRGEALASIAAVSKFTLTTRQKDNSEGIQ 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I KI+ + V GT +EVR+LF+ +PAR FLK+E+ E I +I +MA+++P Sbjct: 124 LDIESGKITDSKIVGAPVGTTIEVRELFYNVPARKKFLKTERTEAGRINTIISKMALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F + NG + ++ + G D N + S+ L G P Sbjct: 184 TIAFRLINNGR---VVIETPGNGRLLDAVTSLYGIDVSNEMFTVEHSSDMYFLDGMISKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + + + +N R V+ I I AY +P YPV ++ L + P +D+NVH Sbjct: 241 SLLKSSRQYQTIIVNHRIVESPLISKAIDNAYHSLLPKTGYPVCIIKLTVPPESIDINVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K I+F + I + ++ K + + + + ++ K+ Sbjct: 301 PQKREIKFEDEKEIFRLVYHAVLKTLTAQSEAAEIATEITYTPKHESVDEKDINIKKFEN 360 Query: 361 SL----------------------TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 + TQE + + N + + L + S + Sbjct: 361 NYYSTKKGNDFVNLYWKDATDTYNNKTQENHYEKRNEYNPENDLKNIYSENSILENFQNN 420 Query: 399 SEATHYQLG--------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 + + I Q+ +II L I+DQHAAHER+ ++K+ ++ Sbjct: 421 EKQSERLFEDIKKEELVIPLGQVANCFIICVKGKELFIIDQHAAHERVRYDKL--AEHAE 478 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 I Q +L P +I + + + L E +D+ RLGI E+ G + I I P S+ ++ Sbjct: 479 SIPVQNILIPHLITMDKQDIELFEERRKDIERLGIIFEQAGIDVIRITGAPEDFSESDME 538 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 +++ D++ S + ++A AC G+I++G + +M L+ ++ Sbjct: 539 RVIHDLLIAFNSQSEPSP-ETLRHRMMAYAACRGAIKAGDVLNIRQMKELISDLFMTSRP 597 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT IK ++ KLF R Sbjct: 598 FVCPHGRPTIIKFTPEELGKLFKR 621 >gi|227536414|ref|ZP_03966463.1| DNA mismatch repair protein MutL [Sphingobacterium spiritivorum ATCC 33300] gi|227243790|gb|EEI93805.1| DNA mismatch repair protein MutL [Sphingobacterium spiritivorum ATCC 33300] Length = 628 Score = 474 bits (1221), Expect = e-131, Method: Composition-based stats. Identities = 181/627 (28%), Positives = 328/627 (52%), Gaps = 41/627 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ A+KELIEN++DA + +++ ++ GKS Q+ DNG G Sbjct: 5 IQLLPDAVANQIAAGEVVQRPASAVKELIENAIDAGADKIKLIVKDAGKSMIQVIDNGCG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + + +RH TSKI +D +I T GFRGEA+ SI A++H+ L +R ++ G Sbjct: 65 MSVTDARLCFERHATSKIRKAEDLFSIRTMGFRGEAMASIAAIAHIELKTRRVEDELGTV 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G KI+ P A++PGT + V++LFF IPAR NFLKS VE I D +R+A+A+P Sbjct: 125 IEIEGSKITDQHPEALSPGTSISVKNLFFNIPARRNFLKSNSVEMRHIIDEFQRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++ F+ + + Y + ++ +RI ++G ++ V + E+++ IT+ G+ G P Sbjct: 185 EIFFSLHSDGNEVYHLPAET----LKQRIVHLLGNNYNQRLVPVEEETSIITINGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + F+N R ++D ++ + AY E + YP+ VL ++IDP ++D+NVH Sbjct: 241 EFAKKTRGEQFFFVNKRFIKDPYLNHAVLNAYEEILSADSYPLYVLFIDIDPAKIDINVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS---------------- 344 P K+ I++ + I + +I++++ + I+ + +++ S Sbjct: 301 PTKTEIKYEDDKAIYAILRSAIKRSLGRYNIAPTLDFNQETGFSNMISQKPLEEIQAPTI 360 Query: 345 -FHQDNAPKTHLPKYATSLTNT-------QEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 F+ D P K + S + + ++K + +N + + ++ + ++ Sbjct: 361 NFNPDFNPFEPGYKESASKSRSDNYTSGFEKKAGIPQNWDTLYQITENEATSSAQLPLLP 420 Query: 397 EESEATHY---------QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 E E Q Q+H +I+SQ G +I+DQ AAHER++FE+ + Sbjct: 421 AEPEEEDIDINVPEVSVQQSKQFFQLHNRFIVSQIHSGFMIIDQQAAHERILFEQFQTHL 480 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS-K 506 + SQ L P+ IDL + AL+ E ++ LG + FG + IPA L Sbjct: 481 EQNQGISQQSLFPQTIDLNSADHALMEEILPEIQSLGFQLRPFGKTTYIVDGIPADLGSN 540 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 N ++ ++++ + + L R EN+ ++A +I+ G + + M L+ + Sbjct: 541 VNEVAIIERLLEDFKHNKSELKLNKR-ENLARSLAKSAAIKPGTLLDNQAMAELIDRLFA 599 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + + +G+P I LS++ + FG Sbjct: 600 CESPNISLYGKPIIITFTLSELLEKFG 626 >gi|163787897|ref|ZP_02182343.1| DNA mismatch repair protein [Flavobacteriales bacterium ALC-1] gi|159876217|gb|EDP70275.1| DNA mismatch repair protein [Flavobacteriales bacterium ALC-1] Length = 616 Score = 474 bits (1221), Expect = e-131, Method: Composition-based stats. Identities = 163/621 (26%), Positives = 302/621 (48%), Gaps = 33/621 (5%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 M I+ L + + NQIAAGE+++RP+ +KEL+EN++DA ++ ++ +I GK+ Q+ D Sbjct: 1 MTDIIQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATEIKLIIKDAGKTLVQVID 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG GM+ + ++ +RH TSKI ++D ++T GFRGEAL SI A++H+ L ++ P++ Sbjct: 61 NGKGMSVTDARLSFERHATSKIKSAEDLFQLNTKGFRGEALASIAAIAHVELKTKRPEDE 120 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G I I G + S GT V V++LFF IPAR NFLKS+ VE ITD R+A Sbjct: 121 LGTAIEIEGSTVKSQEVSVTPSGTSVAVKNLFFNIPARRNFLKSDTVELRHITDEFHRVA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 +A+P ++F F S+ + + T+ N+ +R+ + G V + E++ + + G+ Sbjct: 181 LAHPNIAFVFYHNGSDLFNV----TSENYRQRVVHIFGTKTNEKLVPVEEETEVLKISGF 236 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 G P F++ ++ + F+N R ++ ++ I A+ + G +P L L +DP+ +D Sbjct: 237 VGKPEFSKKTKSEQFFFVNQRFIKSPYLNHAINAAFEGLLKDGYHPSYFLNLTVDPKTID 296 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 +N+HP K+ I+F + + + +++ ++ + I+ ++ + + KT Sbjct: 297 INIHPTKTEIKFDDEHTLYAILRSAVKHSLGQFNIAPILDFEQQSNFNTPYNYKDKTASS 356 Query: 357 ------------------------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 + + ++ E L++ S N T+ D Sbjct: 357 PAIEVDSDFNPFSEGANGSRKQSTSFKQAPADSWEGLYVGLESKSNNSESDFSQVTFESD 416 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + + Q+ Q YI+S G++++DQ+ AH+R+++E + + Sbjct: 417 AKNESMFTDSSIETTKTTFQLQQKYIVSTLKSGMLVIDQNRAHQRILYESFLKHITIKEA 476 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 TSQ LL P + E +I DL G I I +P + + + + Sbjct: 477 TSQQLLFPLQLHFTPNETKIIDGLKLDLEHTGFVFSELNDKEITITGVPVGVPESEVSII 536 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 L +I ++ ++ + + +MA +I++G+ + S E ++ + + Sbjct: 537 LEQLISDV-ENEVPDANFSVADLLAKSMAKSLAIKNGQSLNSTEQEHMVNSLFACKEPNV 595 Query: 573 CNHGRPTFIKLKLSDIEKLFG 593 RPTFI + + DIEK F Sbjct: 596 SPTNRPTFITMAVGDIEKKFM 616 >gi|57651866|ref|YP_186172.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus COL] gi|87161404|ref|YP_493886.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195006|ref|YP_499806.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221417|ref|YP_001332239.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus str. Newman] gi|161509462|ref|YP_001575121.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221142530|ref|ZP_03567023.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258452595|ref|ZP_05700601.1| DNA mismatch repair protein mutL [Staphylococcus aureus A5948] gi|262048182|ref|ZP_06021069.1| DNA mismatch repair protein [Staphylococcus aureus D30] gi|262051356|ref|ZP_06023579.1| DNA mismatch repair protein [Staphylococcus aureus 930918-3] gi|282920540|ref|ZP_06328261.1| DNA mismatch repair protein MutL [Staphylococcus aureus A9765] gi|294848292|ref|ZP_06789039.1| DNA mismatch repair protein mutL [Staphylococcus aureus A9754] gi|71151979|sp|Q5HGD5|MUTL_STAAC RecName: Full=DNA mismatch repair protein mutL gi|109940102|sp|Q93T05|MUTL_STAA8 RecName: Full=DNA mismatch repair protein mutL gi|123486128|sp|Q2FHE2|MUTL_STAA3 RecName: Full=DNA mismatch repair protein mutL gi|172048871|sp|A6QGJ5|MUTL_STAAE RecName: Full=DNA mismatch repair protein mutL gi|189030418|sp|A8Z1W7|MUTL_STAAT RecName: Full=DNA mismatch repair protein mutL gi|57286052|gb|AAW38146.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus COL] gi|87127378|gb|ABD21892.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202564|gb|ABD30374.1| DNA mismatch repair protein HexB, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374217|dbj|BAF67477.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus str. Newman] gi|160368271|gb|ABX29242.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|172087907|emb|CAQ35189.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] gi|172087923|emb|CAQ35197.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] gi|172087931|emb|CAQ35201.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] gi|257859813|gb|EEV82655.1| DNA mismatch repair protein mutL [Staphylococcus aureus A5948] gi|259160731|gb|EEW45752.1| DNA mismatch repair protein [Staphylococcus aureus 930918-3] gi|259163748|gb|EEW48303.1| DNA mismatch repair protein [Staphylococcus aureus D30] gi|269940787|emb|CBI49169.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus TW20] gi|282594202|gb|EFB99189.1| DNA mismatch repair protein MutL [Staphylococcus aureus A9765] gi|294825092|gb|EFG41514.1| DNA mismatch repair protein mutL [Staphylococcus aureus A9754] gi|302751118|gb|ADL65295.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus str. JKD6008] gi|315198538|gb|EFU28867.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus CGS01] gi|320140886|gb|EFW32733.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320143847|gb|EFW35619.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus MRSA177] gi|329313966|gb|AEB88379.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus T0131] Length = 669 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 165/670 (24%), Positives = 305/670 (45%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQ------D 348 HP K +R + I+ IQ+A + + + L K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENR--------------LSTNDLLPSDDPTYSEDND 394 + + S + K F++EN+ ++ D S N+ Sbjct: 359 RQNTENNQEKTFSSEESNSKPFMEENQNDEIVIKEDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIIS-----QTTDGLVIVDQH----------------- 432 E+ E + ++ Q + + Q + D + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSNDGTTVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 433 ---------------AAHERLIF--------EKMRQDFNSTKI-----TSQTLLTPEIID 464 A +E ++ E+++ ++ KI Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|253733466|ref|ZP_04867631.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus TCH130] gi|253728520|gb|EES97249.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus TCH130] Length = 669 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 165/670 (24%), Positives = 303/670 (45%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQDNAPKTH 354 HP K +R + I+ IQ+A + + + L K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 355 LPKYAT------SLTNTQEKLFLQENR--------------LSTNDLLPSDDPTYSEDND 394 S + K F++EN+ ++ D S N+ Sbjct: 359 RQSTENNQEKTFSSEESNSKPFMEENQNDEIVIKEDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIIS-----QTTDGLVIVDQH----------------- 432 E+ E + ++ Q + + Q + D + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSNDDTTVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 433 ---------------AAHERLIF--------EKMRQDFNSTKI-----TSQTLLTPEIID 464 A +E ++ E+++ ++ KI Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|298694588|gb|ADI97810.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus ED133] Length = 669 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 165/670 (24%), Positives = 304/670 (45%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQ------D 348 HP K +R + I+ IQ+A + + + L K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENR--------------LSTNDLLPSDDPTYSEDND 394 + + S + K F+ EN+ ++ D S N+ Sbjct: 359 RQNTENNQEKTFSPEESNSKPFMAENQNDEIVIKEDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIIS-----QTTDGLVIVDQH----------------- 432 E+ E + ++ Q + + Q + D + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSNDDTSVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 433 ---------------AAHERLIF--------EKMRQDFNSTKI-----TSQTLLTPEIID 464 A +E ++ E+++ ++ KI Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMLDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|310658533|ref|YP_003936254.1| DNA mismatch repair protein [Clostridium sticklandii DSM 519] gi|308825311|emb|CBH21349.1| DNA mismatch repair protein [Clostridium sticklandii] Length = 634 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 185/633 (29%), Positives = 318/633 (50%), Gaps = 46/633 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++L +K I+ IAAGE++E P+ +KELIENS+DA+++ + I GGKS+ ++TD+GF Sbjct: 6 QIKQLDDKTISLIAAGEVVESPASIVKELIENSIDAKATSIVLEIRDGGKSYIRVTDDGF 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ +A +RH TSKI+ DF N++T GFRGEAL SI AVS +++ ++ + G Sbjct: 66 GIDEADVELAFKRHTTSKITSFTDFCNLYTNGFRGEALASIAAVSRVSITTKTKEAFLGT 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I+G I V GT + + DL + PAR NFLKS Q ET+ I D++ R+A+ Sbjct: 126 SLIITGGIIEKKEKVGAKDGTTIIIEDLLYNTPARKNFLKSNQAETSKINDIVERLALIN 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS-NEITLQGYTG 238 V F + + T E ++ + + + EL + ++ ++G+ G Sbjct: 186 NSVKFKYINNNKVMLTTSSNLTFS---ESMNNIYNNAYDKSIKELPIEYIDDYGIEGFLG 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + N Y+F+N R V+ K I S + AY++ I + R+P+ ++ L +DP +DVN Sbjct: 243 DNSIMSHNRKNQYIFVNKRVVKSKLITSVVEEAYSQFITINRFPIFLINLNVDPALIDVN 302 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS-------------------VLSK 339 +HP K ++F N +++ + I+ +++ + S L Sbjct: 303 IHPNKLEVKFSNENKLKDILFNYIKSKLSESIMIPKSNLSSKYDKVKKDEPQNINFDLFI 362 Query: 340 KMISSFHQDNAPKTHLPKYA------------------TSLTNTQEKLFLQENRLSTNDL 381 + F QD K Y + N + LF+ EN + DL Sbjct: 363 NETNLFPQDAVKKPASNNYTLDSMPTNDKSHDLENFIINTKPNAENNLFINENPNNNYDL 422 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 + N + +Y+ +YII+Q + L ++DQHAAHER+++E Sbjct: 423 SSKPSSNKTNLNTTSNSNHQFNYKDLSVIGVFINSYIITQYNEALYVIDQHAAHERILYE 482 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 K + + KI+SQ LL P I++ I + + L+ G AE F ++ IR IP Sbjct: 483 KYLNSYKNDKISSQNLLIPISINISFDVSVYIHDIIDLLNDYGFNAEPFSQESLVIRAIP 542 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 I ++ L ++I+ S L D ++ +A+ AC +I++ K+ +E++++L Sbjct: 543 NIFNQNEAINLANELINNF---SKQIYLSDELKEKIASKACKSAIKANDKLLRLEISQIL 599 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ N C HGRP I+L ++EK+F R Sbjct: 600 SDLDSCENKYSCPHGRPITIELSKYELEKMFKR 632 >gi|300771461|ref|ZP_07081336.1| DNA mismatch repair protein MutL [Sphingobacterium spiritivorum ATCC 33861] gi|300761450|gb|EFK58271.1| DNA mismatch repair protein MutL [Sphingobacterium spiritivorum ATCC 33861] Length = 628 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 182/627 (29%), Positives = 326/627 (51%), Gaps = 41/627 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ A+KELIEN++DA + +++ ++ GKS Q+ DNG G Sbjct: 5 IQLLPDAVANQIAAGEVVQRPASAVKELIENAIDAGADKIKLIVKDAGKSMIQVIDNGCG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + + +RH TSKI +D I T GFRGEA+ SI A++H+ L +R ++ G Sbjct: 65 MSVTDARLCFERHATSKIRKAEDLFAIRTMGFRGEAMASIAAIAHIELKTRRVEDELGTV 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G KI+ P A++PGT + V++LFF IPAR NFLKS VE I D +R+A+A+P Sbjct: 125 IEIEGSKITDQHPEALSPGTSISVKNLFFNIPARRNFLKSNAVEMRHIIDEFQRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++ F+ + + Y + ++ +RI ++G ++ V + E+++ IT+ G+ G P Sbjct: 185 EIFFSLHSDGNEVYHLPAET----LKQRIVHLLGNNYNQRLVPVEEETSIITINGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + F+N R ++D ++ + AY E + YP+ VL ++IDP ++D+NVH Sbjct: 241 EFAKKTRGEQFFFVNKRFIKDPYLNHAVLNAYEEILAADSYPLYVLFIDIDPAKIDINVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS---------------- 344 P K+ I++ + I + +I++++ + I+ + ++ S Sbjct: 301 PTKTEIKYEDDKAIYAILRSAIKRSLGRYNIAPTLDFDQETGFSNMISQKPLDEIQAPTI 360 Query: 345 -FHQDNAPKTHLPKYATSLTNT-------QEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 F+ D P K + S + + ++K + +N + + S+ T ++ Sbjct: 361 NFNPDFNPFEPGYKESASKSRSDNYTSGFEKKAGIPQNWDTLYQITESEATTSTQLPLLP 420 Query: 397 EESEATHY---------QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 E E Q Q+H +I+SQ G +I+DQ AAHER++FE+ + Sbjct: 421 AEPEEEDIDINVPEVSVQQSKQFFQLHNRFIVSQIHSGFMIIDQQAAHERILFEQFQAHL 480 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS-K 506 + SQ L P+ IDL + AL+ E ++ LG + FG + IPA L Sbjct: 481 EQNQGISQQSLFPQTIDLNSADHALMEEILPEIQSLGFQLRPFGKTTYIVDGIPADLGSN 540 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 N ++ ++++ + + L R EN+ ++A +I+ G + + M L+ + Sbjct: 541 VNEVAIIERLLEDFKHNKSELKLNKR-ENLARSLAKSAAIKPGTLLDNQAMAELIDRLFA 599 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + + +G+P I +S++ + FG Sbjct: 600 CESPNISLYGKPIIITFTMSELLEKFG 626 >gi|329121176|ref|ZP_08249804.1| DNA mismatch repair protein MutL [Dialister micraerophilus DSM 19965] gi|327470258|gb|EGF15719.1| DNA mismatch repair protein MutL [Dialister micraerophilus DSM 19965] Length = 622 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 187/624 (29%), Positives = 299/624 (47%), Gaps = 38/624 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L EK INQIAAGE++ERP A+KE++ENS+DA +S +E IA GG ++ ++TDNG G Sbjct: 4 IHLLDEKTINQIAAGEVVERPVNAVKEMVENSIDANASEIEVEIADGGITYIRVTDNGSG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M E+ M++ RH TSKIS D+ +I + GFRGEAL SI AVS TL +R N+ G Q Sbjct: 64 MDKEDAEMSIIRHATSKISTVDNIFHISSLGFRGEALASIAAVSKCTLTTRQKDNSEGVQ 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I KI+ + V GT +EVR+LF+ +PAR FLK+E+ E I +I +MA+++P Sbjct: 124 LDIESGKITDSKIVGAPVGTTIEVRELFYNVPARKKFLKTERTEAGRINTIIGKMALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F + NG + ++ + G D N + S L G P Sbjct: 184 TIAFRLINNGR---VVIETPGNGRLLDAVTSLYGIDVSNEMFTVEHSSAMYFLDGMISKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + + + +N R V+ I I AY +P YPV ++ L + P +D+NVH Sbjct: 241 SLLKSSRQYQTIIVNHRIVESPLISKAIDNAYHSLLPKTGYPVCIIKLTVPPESIDINVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAI----NKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 P K I+F N I + ++ K + I+T K S +D K Sbjct: 301 PQKREIKFENEKEIFRLVYHAVLKTLTAQSEATEIATEITYVPKHESVDEKDINTKKIEN 360 Query: 357 KYAT-----------------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 Y + + N + +E + + + + + + + Sbjct: 361 NYYSTKKGNDFVNLYWKDATDTYNNKTQDNHCEEKNEYNPENDLKNIYSENSILENFQNN 420 Query: 400 EATHYQLGIAC---------AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 E +L Q+ +II L I+DQHAAHER+ ++K+ ++ Sbjct: 421 EKQSERLFEDIKKEELVIPLGQVANCFIICVKGKELFIIDQHAAHERVRYDKL--AEHAE 478 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 I Q +L P +I + + + L E +D+ RLGI E+ G + I I P S+ ++ Sbjct: 479 SIPVQNILIPHLITMDKQDIELFEERRKDIERLGIIFEQAGIDVIRITGAPEDFSESDME 538 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 +++ D++ S + ++A AC G+I++G + +M L+ ++ Sbjct: 539 RVIHDLLIAFNSQSEPSP-ETLRHRMMAYAACRGAIKAGDVLNIRQMKELISDLFMTSRP 597 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT IK ++ KLF R Sbjct: 598 FVCPHGRPTIIKFTPEELGKLFKR 621 >gi|258454754|ref|ZP_05702718.1| DNA mismatch repair protein mutL [Staphylococcus aureus A5937] gi|257863137|gb|EEV85901.1| DNA mismatch repair protein mutL [Staphylococcus aureus A5937] Length = 669 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 162/670 (24%), Positives = 298/670 (44%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-KMISSFHQDNAPKTHLPKY 358 HP K +R + I+ IQ+A + + + L + + + Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLYSFEQQKIEFEQ 358 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSD------------------------DPTYSEDND 394 + N QEK F E S + + + D S N+ Sbjct: 359 RQNTENNQEKTFSSEESNSKSFMAENQNDEIVIKEDSYNPFVTKTSESLITDDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTD-------------------GLVIVDQHAA- 434 E+ E + ++ Q + ++ G D Sbjct: 419 TREKDEDYFKKQQKILQEMDQTFDSNEDASVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 435 -----------------HERLIF--------EKMRQDFNSTKI-----TSQTLLTPEIID 464 +E ++ E+++ ++ KI Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|14194230|gb|AAK56306.1|AF378369_2 DNA mismatch repair protein MutL [Staphylococcus aureus] Length = 669 Score = 474 bits (1219), Expect = e-131, Method: Composition-based stats. Identities = 165/670 (24%), Positives = 305/670 (45%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQ------D 348 HP K +R + I+ IQ+A + + + L K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENR--------------LSTNDLLPSDDPTYSEDND 394 + + S + K F++ENR ++ D S ++ Sbjct: 359 RQNTENNQEKTFSSEESNSKPFMEENRNDEIVIKEDSYNPFVTKTSESLIADDESSGYDN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIIS-----QTTDGLVIVDQH----------------- 432 E+ E + ++ Q + + Q + D + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSNDGTTVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 433 ---------------AAHERLIF--------EKMRQDFNSTKI-----TSQTLLTPEIID 464 A +E ++ E+++ ++ KI Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|304440468|ref|ZP_07400357.1| DNA mismatch repair protein MutL [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371220|gb|EFM24837.1| DNA mismatch repair protein MutL [Peptoniphilus duerdenii ATCC BAA-1640] Length = 630 Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 182/637 (28%), Positives = 306/637 (48%), Gaps = 53/637 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L E +++IAAGEIIE P+ +KEL+ENS+DA + + + G ++ +++D+G G Sbjct: 2 INILDEYTVSKIAAGEIIENPASIVKELLENSIDAGAKNITVEVKDGAANYLRVSDDGSG 61 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ A RH TSK+ SDD NIH+ GFRGEAL SI VS LT +++ + T Sbjct: 62 IEKDDLKYAFLRHATSKLKTSDDLFNIHSLGFRGEALASISNVSKLTCITKTKSDLTATV 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + +I S + +A N GT +RD+F+ P R +LKSE +E + I DV+ +++++ Sbjct: 122 VEVENGEIKSEKNIASNEGTTFIIRDVFYNTPVRKKYLKSENLEFSYIFDVVEKLSLSRS 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SFT N N I V+G D N VE+ + ++G+ Sbjct: 182 EISFTLVRDGKVVVSSIA---NENLKNHIHSVLGSDITRNLVEIEHEEEGYKIKGFISNN 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N Y+F+NGR V++ I I +Y IPL R+PV +L +EIDP+ VDVN+H Sbjct: 239 MLYRSTRNHEYLFVNGRFVKNLEIARAIEKSYKSLIPLNRFPVYLLYIEIDPKLVDVNIH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K I+ N + + +++ + K +K S ++ + Sbjct: 299 PKKHEIKLSNENRLIEILDMLVREKLYKNTSIFKVNFEEKEEKSIFEEFGSFDNNSFDNN 358 Query: 361 SLTNTQEKLFLQENRLSTN------------------DLLPSDDPTYSEDNDPVEESEAT 402 S N++E + TN D L +D + D + + Sbjct: 359 SNENSEEDTWFNRPTEKTNTSNEFIKVIDGIDFSHEYDSLEVEDEKREKCTDSLSNNITK 418 Query: 403 HYQLGIAC------------------------AQIHQNYIISQTTDG-LVIVDQHAAHER 437 + + + + Y+I ++ + IVDQHAAHER Sbjct: 419 YENISFNVADKSDEYLVEKPQILKDLLNSTYKGSLFKTYLIFESYEDKFYIVDQHAAHER 478 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 + +EK +++F I Q LL+P ++++ E +++E+ E+L LG E FG + + Sbjct: 479 INYEKFKREFEEKSIERQVLLSPLLVEVTSEERKVLLENTENLKNLGFYFEEFGEKSFLL 538 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 REIP I K + + +++ + D+ + T AC S+++G + E+ Sbjct: 539 REIPIIFGKPSGLGFIHELLSDSYDNLYKVDPYKIM-----TKACKASVKAGDSLSIEEI 593 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L++ + N C HGRPT ++LK D+E+LF R Sbjct: 594 KELIKLLSNCDNPLTCPHGRPTILELKKYDLERLFLR 630 >gi|15924287|ref|NP_371821.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus Mu50] gi|15926879|ref|NP_374412.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus N315] gi|150393845|ref|YP_001316520.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus JH1] gi|156979617|ref|YP_001441876.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus Mu3] gi|255006083|ref|ZP_05144684.2| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795648|ref|ZP_05644627.1| DNA mismatch repair protein MutL [Staphylococcus aureus A9781] gi|258416051|ref|ZP_05682319.1| DNA mismatch repair protein MutL [Staphylococcus aureus A9763] gi|258421634|ref|ZP_05684558.1| DNA mismatch repair protein mutL [Staphylococcus aureus A9719] gi|258434790|ref|ZP_05688864.1| DNA mismatch repair protein mutL [Staphylococcus aureus A9299] gi|258444634|ref|ZP_05692963.1| DNA mismatch repair protein mutL [Staphylococcus aureus A8115] gi|258447533|ref|ZP_05695677.1| DNA mismatch repair protein mutL [Staphylococcus aureus A6300] gi|258449375|ref|ZP_05697478.1| DNA mismatch repair protein mutL [Staphylococcus aureus A6224] gi|269202913|ref|YP_003282182.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus ED98] gi|282892784|ref|ZP_06301019.1| DNA mismatch repair protein mutL [Staphylococcus aureus A8117] gi|282927638|ref|ZP_06335254.1| DNA mismatch repair protein MutL [Staphylococcus aureus A10102] gi|295406233|ref|ZP_06816040.1| DNA mismatch repair protein MutL [Staphylococcus aureus A8819] gi|296274854|ref|ZP_06857361.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus MR1] gi|297244461|ref|ZP_06928344.1| DNA mismatch repair protein mutL [Staphylococcus aureus A8796] gi|54037875|sp|P65492|MUTL_STAAN RecName: Full=DNA mismatch repair protein mutL gi|54041516|sp|P65491|MUTL_STAAM RecName: Full=DNA mismatch repair protein mutL gi|166232110|sp|A7X1T8|MUTL_STAA1 RecName: Full=DNA mismatch repair protein mutL gi|189030417|sp|A6U1B5|MUTL_STAA2 RecName: Full=DNA mismatch repair protein mutL gi|13701096|dbj|BAB42391.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus N315] gi|14247067|dbj|BAB57459.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus Mu50] gi|149946297|gb|ABR52233.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus JH1] gi|156721752|dbj|BAF78169.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus Mu3] gi|172087905|emb|CAQ35188.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] gi|172087911|emb|CAQ35191.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] gi|172087915|emb|CAQ35193.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] gi|172087919|emb|CAQ35195.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] gi|172087921|emb|CAQ35196.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] gi|257789620|gb|EEV27960.1| DNA mismatch repair protein MutL [Staphylococcus aureus A9781] gi|257839199|gb|EEV63675.1| DNA mismatch repair protein MutL [Staphylococcus aureus A9763] gi|257842320|gb|EEV66745.1| DNA mismatch repair protein mutL [Staphylococcus aureus A9719] gi|257849151|gb|EEV73133.1| DNA mismatch repair protein mutL [Staphylococcus aureus A9299] gi|257850127|gb|EEV74080.1| DNA mismatch repair protein mutL [Staphylococcus aureus A8115] gi|257853724|gb|EEV76683.1| DNA mismatch repair protein mutL [Staphylococcus aureus A6300] gi|257857363|gb|EEV80261.1| DNA mismatch repair protein mutL [Staphylococcus aureus A6224] gi|262075203|gb|ACY11176.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus ED98] gi|282590641|gb|EFB95718.1| DNA mismatch repair protein MutL [Staphylococcus aureus A10102] gi|282764781|gb|EFC04906.1| DNA mismatch repair protein mutL [Staphylococcus aureus A8117] gi|285816978|gb|ADC37465.1| DNA mismatch repair protein MutL [Staphylococcus aureus 04-02981] gi|294968821|gb|EFG44843.1| DNA mismatch repair protein MutL [Staphylococcus aureus A8819] gi|297178491|gb|EFH37737.1| DNA mismatch repair protein mutL [Staphylococcus aureus A8796] gi|315131090|gb|EFT87074.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus CGS03] gi|329727180|gb|EGG63636.1| DNA mismatch repair protein, C-terminal domain protein [Staphylococcus aureus subsp. aureus 21172] Length = 669 Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 162/670 (24%), Positives = 298/670 (44%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-KMISSFHQDNAPKTHLPKY 358 HP K +R + I+ IQ+A + + + L + + + Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLYSFEQQKIEFEQ 358 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSD------------------------DPTYSEDND 394 + N QEK F E S + + + D S N+ Sbjct: 359 RQNTENNQEKTFSSEESNSKSFMAENQNDEIVIKEDSYNPFVTKTSESLITDDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTD-------------------GLVIVDQHAA- 434 E+ E + ++ Q + ++ G D Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSNEDASVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 435 -----------------HERLIF--------EKMRQDFNSTKI-----TSQTLLTPEIID 464 +E ++ E+++ ++ KI Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|283470512|emb|CAQ49723.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus ST398] Length = 669 Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 165/670 (24%), Positives = 304/670 (45%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQ------D 348 HP K +R + I+ IQ+A + + + L K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENR--------------LSTNDLLPSDDPTYSEDND 394 + + S + K F+ EN+ ++ D S N+ Sbjct: 359 RQNTENNQEKTFSSEESNSKPFMAENQNDEIVIKEDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIIS-----QTTDGLVIVDQH----------------- 432 E+ E + ++ Q + + Q + D + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSNDDTSVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 433 ---------------AAHERLIF--------EKMRQDFNSTKI-----TSQTLLTPEIID 464 A +E ++ E+++ ++ KI Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|321272299|gb|ADW80184.1| MutL [Wolbachia endosymbiont wVitA of Nasonia vitripennis phage WOVitA1] gi|321272351|gb|ADW80232.1| MutL [Wolbachia endosymbiont wVitB of Nasonia vitripennis phage WOVitB] Length = 598 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 224/610 (36%), Positives = 344/610 (56%), Gaps = 29/610 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L K IN+IAAGE+IERP+ +KEL+EN++DA SS +E I GG++ +TD+G Sbjct: 1 MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSSEIEIKIESGGRNLITVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSK+SD + I GFRGEALPSI AVS + L S+ Sbjct: 61 NGIEKDDLELAFMRHATSKLSDSELIEIKHLGFRGEALPSIAAVSRMKLSSKASGAKEAW 120 Query: 120 QIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I GEKI + P ++ GT +EVRDLFF P RL FLK+E+ ET I D++ +A+ Sbjct: 121 SIRYEGGEKIREITPCSLLQGTYIEVRDLFFATPNRLKFLKTERAETQSIVDIVNNLAMI 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + FT ++ K Q++ N I + +F +N++E+ E+ I L+G+ Sbjct: 181 NYSIGFTLTSGNKKLLKYVKQTSLFNRLCEIEE----EFQSNSLEVKEEEEGIKLKGHIC 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P NRGN+ Q Y F+NGR ++D ++ IR AY + IP RYP VL LEI QVDVN Sbjct: 237 KPNVNRGNSTQIYTFVNGRPIKDNLLVGAIRYAYHDFIPNNRYPFAVLHLEIPYDQVDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI-----SSFHQDNAPKT 353 VHP KS +RF+N +I + + I K ++ + + + +++I S D+ K Sbjct: 297 VHPNKSEVRFQNKRLIYEIVRRGIIKTLSTRFAAGDQGIEEELIFNDSKSQEQVDSQEKK 356 Query: 354 HLPKYATSLTNTQEKLFLQ------ENRLSTNDLLPSDDPTYSEDNDPVEESEAT---HY 404 ++ + E ++ E R S + + + +E + + Sbjct: 357 DQKEFYEKRPSLLENRLMKEFNAPDERRQSLPETFKYGESPPQKGTMVLERKQIDLVEDH 416 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 LG A Q+H YII+++ D L+IVDQHAA+ERLI+E ++ + I Q LL + Sbjct: 417 PLGYARCQVHNTYIIAESGDRLIIVDQHAAYERLIYECLK---QKSSIKRQKLLPETVEI 473 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + ++ + ++L +G E + + I+EIPAIL +I ++L DI+D++++ Sbjct: 474 KNQAGMGMVKTYKDELFEMGFDIEIQSEDKVTIKEIPAILGTIDIKEMLVDIVDKLMEME 533 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 T ++D++ I AT+AC+G+ GRKM+ EMN +LR++EK P S H RPT+I++K Sbjct: 534 DTLPIEDKVNKISATIACHGA---GRKMKLEEMNEILRQIEKTPYSG---HERPTYIEMK 587 Query: 585 LSDIEKLFGR 594 LSDIEKLF R Sbjct: 588 LSDIEKLFER 597 >gi|282903851|ref|ZP_06311739.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus C160] gi|282595469|gb|EFC00433.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus C160] Length = 669 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 165/670 (24%), Positives = 304/670 (45%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQ------D 348 HP K +R + I+ IQ+A + + + L K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENR--------------LSTNDLLPSDDPTYSEDND 394 + + S + K F+ EN+ ++ D S N+ Sbjct: 359 RQNTENKQERTFSSEESNSKPFMAENQNDEIVIKEDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIIS-----QTTDGLVIVDQH----------------- 432 E+ E + ++ Q + + Q + D + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSNDDTSVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 433 ---------------AAHERLIF--------EKMRQDFNSTKI-----TSQTLLTPEIID 464 A +E ++ E+++ ++ KI Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEIQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|86158140|ref|YP_464925.1| DNA mismatch repair protein [Anaeromyxobacter dehalogenans 2CP-C] gi|123764022|sp|Q2IIL0|MUTL_ANADE RecName: Full=DNA mismatch repair protein mutL gi|85774651|gb|ABC81488.1| DNA mismatch repair protein MutL [Anaeromyxobacter dehalogenans 2CP-C] Length = 608 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 174/608 (28%), Positives = 300/608 (49%), Gaps = 18/608 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L ++NQIAAGE++ERP+ +KEL+EN+LDA ++ + + GG + ++ D+G Sbjct: 3 RIHVLPPGLVNQIAAGEVVERPASIVKELVENALDAGATAIGVDVEEGGLALVRVADDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A++RH TSK+ D + I T GFRGEA+P+I +VS L + P ++ G Sbjct: 63 GMDRDDALLALERHATSKLRDAEGLAAIGTMGFRGEAVPAIASVSRFRLDTSPGEDGAGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G + V PVA GT VEVRDLFF PAR F+++ E +++ + R+A+A Sbjct: 123 RVEIEGGVLGEVAPVARPRGTTVEVRDLFFNTPARRKFMRAASTEAGHVSEAVIRLALAR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V FT + G +R Q +G + + + ++ + E+ + G Sbjct: 183 PDVGFTLRSGGRLVLGARAG---GGLADRAGQALGREAHRHLLPVDARRGEVRVHGLICS 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + Y+F+NGR V+D+ + A+A T+P GR+P VL +E+ +VDVNV Sbjct: 240 PDHSEATGRALYLFVNGRYVRDRAAAHAVLRAFAGTLPPGRHPAGVLFVELPLDRVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH------------Q 347 HP K +RF + + + ++ A+ + + + Sbjct: 300 HPQKLEVRFAEGREVFDALFHTVAGALRTAPWLRARPQAAPAGEGPPAGGEAVAVPLAGE 359 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 D A + A + L L + ++ Sbjct: 360 DAAAVLAWARAARPPEGSGATLVQPAPGAWATGRLAFPIAPAPDAGPEAAPRPEGYFAGL 419 Query: 408 IACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q + Y++ + G LV++DQHA+HER++F ++++ F + +I Q L P+++ L Sbjct: 420 RYVGQHARTYLLCEAPGGTLVVIDQHASHERMLFHRLKEAFRARRIPVQPYLLPQVVTLP 479 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 + +L RLG AE FG +A A++ PA L+ ++ LL D+ ++ D Sbjct: 480 PAAARALEAGLAELGRLGFDAEPFGGDAFAVKGAPAALAGVDLTALLTDLGSQLADVERG 539 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 + D ++LATMAC+ ++R+ + + E LL ++ ++C HGRP +L L+ Sbjct: 540 SAVDDAFHDLLATMACHAAVRANQDVSPEEARALLDGLDAIDFKARCPHGRPVVFELSLA 599 Query: 587 DIEKLFGR 594 D+E+ GR Sbjct: 600 DLERRVGR 607 >gi|51892886|ref|YP_075577.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM 14863] gi|81826108|sp|Q67NL0|MUTL_SYMTH RecName: Full=DNA mismatch repair protein mutL gi|51856575|dbj|BAD40733.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM 14863] Length = 635 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 187/645 (28%), Positives = 303/645 (46%), Gaps = 64/645 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E+ NQIAAGE++ERP+ +KEL+EN+LDA++ R+ ++GGG+ ++TD+G Sbjct: 3 RIRLLDERTANQIAAGEVVERPASVVKELVENALDAQAKRIVVEVSGGGRELVRVTDDGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ +A+QRH TSKI +D + I T GFRGEALPSI AVS L++RP G Sbjct: 63 GMVPEDARLALQRHATSKIRTAEDLNAITTLGFRGEALPSIAAVSQFELITRPHDQLAGY 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I G +I + GT V VRDLFF +PARL +LK+ E I D++ R+A+A Sbjct: 123 RILAEGGQIVAEGEHGCPAGTRVTVRDLFFNVPARLKYLKTNATELAQIGDILTRLALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F F S + ++ G+ ++ ++G + + ++ +++ + G+ G Sbjct: 183 PEVAFRFQ---SGQAQVFATPGTGDLTAAVAALLGREMAKELLPVDYRNDAARVHGFVGR 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT R + Y F+N R V+ + AYA +P GRYPV +L +E++P +VDVNV Sbjct: 240 PTIARAGRSHQYFFVNRRAVRTIAARYALEEAYAHLLPNGRYPVCILFIEVEPHEVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL---- 355 HP K+ +RF+ +R + Q+ + A+ + + ++ K L Sbjct: 300 HPTKAEVRFQRDREVRAAVYQAARHALGAALLIPGTEVTADGEVRVPDRAEEKAALQRGW 359 Query: 356 -----------------PKYATSLTNTQEKLFLQENRLST-----------------NDL 381 P + S + +E + Sbjct: 360 VPPGAGRPGEGGGRAAPPPWRVSAGGPGGQTTAREPVQAYLPAGGLQAALAQRAAEEAAA 419 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 P + Q+H++YI +GL ++DQHAAHER+ FE Sbjct: 420 AVPAVDLAEATLVPRSAEPGELIRALRPLGQVHRSYIACDGPEGLYLIDQHAAHERIFFE 479 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 ++ Q LL P +DL + A+ E+ G +AE FG N + I +P Sbjct: 480 RLYAAAQEQATAVQRLLFPLTLDLTPAQMAIWQENAAIFAESGFEAEPFGGNTLLIHGVP 539 Query: 502 AILSKKNIPQLLRDIIDEIIDS--STTYTLQDRIENIL----------ATMACYGSIRSG 549 A L ++ +L+ D +D + + + + DR +L Sbjct: 540 AGLGTDHVARLVCDFLDRLQEDQVAPGTPVTDRRRRVLAAMAACKAAIKAR--------- 590 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +Q ++ LL ++ + C HGRPT I + +S++EK F R Sbjct: 591 DPLQPEDIAALLSDLAACASPETCPHGRPTVICVSISELEKRFKR 635 >gi|160914742|ref|ZP_02076956.1| hypothetical protein EUBDOL_00749 [Eubacterium dolichum DSM 3991] gi|158433282|gb|EDP11571.1| hypothetical protein EUBDOL_00749 [Eubacterium dolichum DSM 3991] Length = 659 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 202/662 (30%), Positives = 311/662 (46%), Gaps = 75/662 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L E + N IAAGE++ERPS +KEL+ENS+DA++ +E I GG I D+G Sbjct: 3 RIHQLDEHLSNMIAAGEVVERPSGIVKELVENSIDAKAKHIEIQILQGGIDCITIIDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +++ +A +RH TSKI DD I T GFRGEALPSI +VS +TL R + Sbjct: 63 GMDAQDATLAFERHATSKIQAVDDLWKISTMGFRGEALPSIASVSQVTL--RTNDGIDSS 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I + S RP GT++EVR+LF PAR LKS Q E +LI+DV+++ AI++ Sbjct: 121 EVIIYYGTLKSARPCGTPKGTMLEVRNLFQKTPARFKHLKSPQYEFSLISDVVQKFAISH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + F S + +K NGN E + Q+ G D A+EL+ + + T++GY Sbjct: 181 PNIGFELSHDGRSVFKTK---GNGNLREVLMQIYGRDGAKTAIELHGQDLDYTIRGYALQ 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F R ++INGR +++ + + AYA +P RYP+ V+ +E+D + VDVNV Sbjct: 238 PQFQRATKYYVLLYINGRMIRNYHLQKAVMDAYAPYMPKDRYPIAVINMEMDAQLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK------------------- 340 HP+K IR + + Q+I+ A+ + + K+ Sbjct: 298 HPSKWEIRLSKEKQLEKLLYQTIKAALMQDMEVPNIQARKENKKEKIEIQELQFTYPRDQ 357 Query: 341 ---------MISSFHQDNAPK---THLPKYATSLTNTQEKLFLQENRLSTN--------- 379 S H + PK T K QE E + S + Sbjct: 358 EVKKLHTEVNDSFVHYNGKPKQTITEESKVQVDKVEPQEAPVEAEKQESVDKKQELSESQ 417 Query: 380 ---------------------------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 D++P + + +P ES Q Sbjct: 418 SSDTQAPIKDQVIEEVSTTKQAETLFKDIVPIQEVVMKAEQEPASESINPSLPQLHVIGQ 477 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 H +YI+++ GL I+DQHAA ER +E +++ S +Q LL P ++ + Sbjct: 478 FHNSYILAEGEKGLYIIDQHAAQERYHYEMIQKQILSGVKDTQPLLIPITVETTISAVSR 537 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 I + + L ++GI E FG + RE+P L L+D+ID + +L Sbjct: 538 IDDLNALLEQVGIHFEVFGNTTLLCRELPIWLKDTKEEAFLQDMID-LWQKDDEISLDKL 596 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 ++ +ATMAC+ SIR R + EM +++ ++ K C HGRPT I + D+ F Sbjct: 597 RKHTIATMACHSSIRFHRSLTMEEMKQVILDLGKCEQPFHCPHGRPTLICYEDKDLIHDF 656 Query: 593 GR 594 R Sbjct: 657 ER 658 >gi|169830745|ref|YP_001716727.1| DNA mismatch repair protein MutL [Candidatus Desulforudis audaxviator MP104C] gi|238688222|sp|B1I293|MUTL_DESAP RecName: Full=DNA mismatch repair protein mutL gi|169637589|gb|ACA59095.1| DNA mismatch repair protein MutL [Candidatus Desulforudis audaxviator MP104C] Length = 565 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 174/595 (29%), Positives = 290/595 (48%), Gaps = 35/595 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L +++IAAGE++ERP+ +KEL+EN+LDA + V IA GG +TD+G Sbjct: 3 RIRVLDADTVSRIAAGEVVERPAAVVKELVENALDAGARVVHIDIAAGGLERITVTDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + +A+QRH TSKI ++D + T GFRGEALPSI AVS LTL +RP ++ G Sbjct: 63 GMEPGDAELALQRHATSKITAAEDLEAVRTLGFRGEALPSIAAVSRLTLRTRPAASSAGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G + S PGT+V VRDLFF PAR F++S E +I++++ R+A++ Sbjct: 123 VLETEGGLVLSAGVSGGPPGTVVTVRDLFFNTPARKKFVRSAAHEGAMISEMVGRLALSR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F + ++ S +G+ + I V G V + + + + GY G Sbjct: 183 PEVAFRLTVNGR---QVLATSGSGDLLDAIGAVFGAAVAREMVPVRFEERGLGVSGYVGR 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R + F+NGR ++ ++ + + +P GR+ V+VL L ++P VDVNV Sbjct: 240 PGVSRSSRRHQVFFVNGRYIRSAYLGAAAEESLHGAMPAGRHAVLVLHLSVEPGMVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +RF P + + +++++A++++ + S+ +P Sbjct: 300 HPAKHEVRFSQPRDVYVVVHRAVREALHREIQIP-VEECGHLESACFPGAGTGFRIPVQV 358 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 T E E + + + YI+ Sbjct: 359 TFQGGEPE--------------------------LREESTGYQGFPQLQPLGFLPPAYIL 392 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + DGL I+DQHAAHER++FE+ + + + LL P ++++ E + ++ Sbjct: 393 AGGADGLYILDQHAAHERVLFEQYLRTLEQS--AGKQLLVPVMVEIRGREAQTLEDYGPF 450 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L + G + + FG A IR +P+ L LL D++D + + A Sbjct: 451 LRQAGFEVDPFGEGAYLIRTVPSFLRPGAEAVLLTDVLDRLAGERPVDA-DAFRRVVAAV 509 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC+ ++R G K E LL ++ + C HGRPT I++ ++ + F R Sbjct: 510 LACHRAVRGGDKPAGPEAAALLTDLGRCAEPYLCPHGRPTLIRIGFPELARRFQR 564 >gi|282908590|ref|ZP_06316420.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus WW2703/97] gi|283958039|ref|ZP_06375490.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus A017934/97] gi|282327652|gb|EFB57935.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus WW2703/97] gi|283790188|gb|EFC29005.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus A017934/97] Length = 669 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 164/670 (24%), Positives = 304/670 (45%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E++P VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMNPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQ------D 348 HP K +R + I+ IQ+A + + + L K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENR--------------LSTNDLLPSDDPTYSEDND 394 + + S + K F+ EN+ ++ D S N+ Sbjct: 359 RQNTENKQEKTFSSEESNSKPFMAENQNDEIVIKEDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIIS-----QTTDGLVIVDQH----------------- 432 E+ E + ++ Q + + Q + D + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSNDDTSVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 433 ---------------AAHERLIF--------EKMRQDFNSTKI-----TSQTLLTPEIID 464 A +E ++ E+++ ++ KI Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEIQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|49483459|ref|YP_040683.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257425350|ref|ZP_05601775.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus 55/2053] gi|257428011|ref|ZP_05604409.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus 65-1322] gi|257430644|ref|ZP_05607026.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus 68-397] gi|257433404|ref|ZP_05609762.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus E1410] gi|257436246|ref|ZP_05612293.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus M876] gi|282905614|ref|ZP_06313469.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus Btn1260] gi|282910868|ref|ZP_06318671.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus WBG10049] gi|282914073|ref|ZP_06321860.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus M899] gi|282918995|ref|ZP_06326730.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus C427] gi|282924118|ref|ZP_06331794.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus C101] gi|293501105|ref|ZP_06666956.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus 58-424] gi|293510067|ref|ZP_06668775.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus M809] gi|293526653|ref|ZP_06671338.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus M1015] gi|295427783|ref|ZP_06820415.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591259|ref|ZP_06949897.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus MN8] gi|56749233|sp|Q6GHD9|MUTL_STAAR RecName: Full=DNA mismatch repair protein mutL gi|49241588|emb|CAG40274.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus MRSA252] gi|172087909|emb|CAQ35190.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] gi|172087913|emb|CAQ35192.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] gi|257271807|gb|EEV03945.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus 55/2053] gi|257274852|gb|EEV06339.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus 65-1322] gi|257278772|gb|EEV09391.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus 68-397] gi|257281497|gb|EEV11634.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus E1410] gi|257284528|gb|EEV14648.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus M876] gi|282314090|gb|EFB44482.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus C101] gi|282316805|gb|EFB47179.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus C427] gi|282322141|gb|EFB52465.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus M899] gi|282325473|gb|EFB55782.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus WBG10049] gi|282330906|gb|EFB60420.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus Btn1260] gi|290920725|gb|EFD97788.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus M1015] gi|291096110|gb|EFE26371.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus 58-424] gi|291467011|gb|EFF09529.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus M809] gi|295128141|gb|EFG57775.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576145|gb|EFH94861.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus MN8] gi|315194183|gb|EFU24576.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus CGS00] Length = 669 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 165/670 (24%), Positives = 304/670 (45%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQ------D 348 HP K +R + I+ IQ+A + + + L K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENR--------------LSTNDLLPSDDPTYSEDND 394 + + S + K F+ EN+ ++ D S N+ Sbjct: 359 RQNTENKQEKTFSSEESNSKPFMAENQNDEIVIKEDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIIS-----QTTDGLVIVDQH----------------- 432 E+ E + ++ Q + + Q + D + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSNDDTSVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 433 ---------------AAHERLIF--------EKMRQDFNSTKI-----TSQTLLTPEIID 464 A +E ++ E+++ ++ KI Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEIQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|223938074|ref|ZP_03629972.1| DNA mismatch repair protein MutL [bacterium Ellin514] gi|223893288|gb|EEF59751.1| DNA mismatch repair protein MutL [bacterium Ellin514] Length = 667 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 178/663 (26%), Positives = 301/663 (45%), Gaps = 70/663 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR LS+++ NQIAAGE++ERP+ +KEL+EN+LDA +SRV I GG+S ++TD+G Sbjct: 3 RIRLLSDQVANQIAAGEVVERPASVVKELVENALDAGASRVTVEIQAGGRSLVRVTDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ--NNT 117 GM+ ++ + ++RH TSKI ++D + I T GFRGEALPSI +VS TL +R + Sbjct: 63 GMSRDDALLCLERHATSKIQRAEDLAAIATMGFRGEALPSIASVSRFTLTTRERDGGSPE 122 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G QI + G KI V+ GT VEVR +FF +PAR FL+SE+ E+ I + A+ Sbjct: 123 GTQIVVVGGKIMEVKAAGSATGTSVEVRQIFFNLPARRKFLRSEETESAHIQHYLTLAAL 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGN-------FPERISQVIGEDFINNAVELNEK--- 227 AYP+V+FTFS ++ + + ER+ + G + V+ + + Sbjct: 183 AYPEVAFTFSKDARLIWQWPAVNAGKDAASRINGLRERMRAIHGSEQKLLPVDFSVELAE 242 Query: 228 ------------------SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIR 269 N + G G P +R +F+N R V+++ + + Sbjct: 243 PVEVDENDLAVSMLREQPKNTFRVWGLMGAPGVSRSTREDQNLFVNRRPVENRGLNFALI 302 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + GR+PV L LEI+P VDVN+HP+K ++F +R + Q++++ + K Sbjct: 303 EGYHTALMKGRFPVCCLFLEINPAAVDVNIHPSKREVKFHQEMQVRRLVTQAVRQTLLKF 362 Query: 330 G-------------------------------------ISTSSVLSKKMISSFHQDNAPK 352 T +L + + + Sbjct: 363 HTTGNDGAPARGVEHSSELTRSVGVAAPAAAIAKAPEMPRTEELLQRSNLVAPASAGGVA 422 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 P + + + + L S + Sbjct: 423 NKAPLWEARTPIEPARPVMPASSQLPIASLAVQPSATSVASQLSAGPVPLLNVPLRVVGV 482 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI-TSQTLLTPEIIDLLEGECA 471 + + Y++ ++ GLV++DQHAAHER++FE+M SQ LL PE ++L + Sbjct: 483 VGRLYVVLESDRGLVLLDQHAAHERILFEQMLNRLEGQGSAASQKLLLPETVELSVRDAQ 542 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 + +L RLG+ FG + +P + + + + +++DE+ + Sbjct: 543 FLRGQLAELTRLGVGLSEFGERTFLLDALPPFVRASDPRRFVLELVDELKSAGEEVNSLR 602 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 E+ +A C ++++ + E+ L+ ++ C HGRPT I++ ++EK Sbjct: 603 LGEHTIAKTVCRHAVKANDPLGGPELENLVNDLRHCAMPYTCPHGRPTLIEMNYRELEKK 662 Query: 592 FGR 594 FGR Sbjct: 663 FGR 665 >gi|323443947|gb|EGB01558.1| DNA mismatch repair protein [Staphylococcus aureus O46] Length = 669 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 165/670 (24%), Positives = 305/670 (45%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISVEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PEIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQ------D 348 HP K +R + I+ IQ+A + + + L K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENR--------------LSTNDLLPSDDPTYSEDND 394 + + S + K F+ EN+ ++ D S N+ Sbjct: 359 RQNTENNQEKTFSSEESNSKPFMAENQNDEIVIKEDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIIS-----QTTDGLVIVDQH----------------- 432 E+ E + ++ Q + + Q + D + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSNDDTSVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 433 ---------------AAHERLIF--------EKMRQDFNSTKI-----TSQTLLTPEIID 464 A +E ++ E+++ ++ KI Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|282916556|ref|ZP_06324314.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus D139] gi|283770360|ref|ZP_06343252.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus H19] gi|282319043|gb|EFB49395.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus D139] gi|283460507|gb|EFC07597.1| DNA mismatch repair protein mutL [Staphylococcus aureus subsp. aureus H19] Length = 669 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 164/670 (24%), Positives = 304/670 (45%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQ------D 348 HP K +R + I+ IQ+A + + + L K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENR--------------LSTNDLLPSDDPTYSEDND 394 + + S + + F+ EN+ ++ D S N+ Sbjct: 359 RQNTENNQEKTFSSEESNSRPFMAENQNDEIVIKEDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIIS-----QTTDGLVIVDQH----------------- 432 E+ E + ++ Q + + Q + D + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSNDDTSVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 433 ---------------AAHERLIF--------EKMRQDFNSTKI-----TSQTLLTPEIID 464 A +E ++ E+++ ++ KI Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|57234054|ref|YP_181908.1| MutL/HexB family DNA mismatch repair protein [Dehalococcoides ethenogenes 195] gi|57224502|gb|AAW39559.1| DNA mismatch repair protein, MutL/HexB family [Dehalococcoides ethenogenes 195] Length = 566 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 182/599 (30%), Positives = 319/599 (53%), Gaps = 39/599 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + I +IAAGE+IERPS +KEL+ENSLDA + RV+ VI GG + +++D+G Sbjct: 1 MPIKLLDKATIARIAAGEVIERPSSVVKELLENSLDAGAKRVDVVIREGGIGYIEVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ +A +RH TSK+S +D I + GFRGEALPSI AV+ L +++ +G Sbjct: 61 CGIVFSEVLLAFERHATSKLSSFEDIYAISSLGFRGEALPSIAAVADLEMLTAARTEESG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++SG ++ +A +PGT +++ LF +PARL FLK+ Q E + +++V+ A+A Sbjct: 121 TYLSLSGGEMVKHTRMARSPGTTIKLTRLFSRVPARLKFLKTPQHEASKVSEVVLSYALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE---ITLQG 235 YP+V FT S N NG + + ++ G D + ++L S I + G Sbjct: 181 YPEVKFTLSIDGRNTLN---TPGNGKLRDAVLEIYGNDVASKMLDLETDSYRSSAINISG 237 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 P +R N N + F+N R +Q + + AY+ + +GRYP+ V+ + +D V Sbjct: 238 LVSPPEISRSNRNSLHFFVNRRLIQSRALQKAAEQAYSGLLMVGRYPLGVINIWLDGALV 297 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVN+HP K+ ++F + + + + ++++ + +K + + S + Q++A + + Sbjct: 298 DVNIHPTKAEVKFSDESAVFTAVQRAVRSVLVEK---PPTPHIAEEASVYRQESARQEPI 354 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 T ++ F + ++ ++ + L QI Sbjct: 355 WGETPKPAGTVQQYF----------------------SPVIQSAKTSVLPLLRLVGQIGG 392 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 Y++++ DGL I+DQHAAHER+ +E++ S + Q+LL P I++L + A+I + Sbjct: 393 LYLLAEGPDGLYIIDQHAAHERIRYEEIASQTPS-ENARQSLLDPFILELNPVQEAMIEK 451 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 +L +G + E FG ++ IPA + LL +++D D+ +++R++ Sbjct: 452 CKSELDLMGFEIEEFGRRVYRVQSIPAGFTAPQAKALLSELVDNPKDAPAE--IKERLQR 509 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + MAC+ ++R+G+ + EM LL ++EK C HGRPT +K+ +EK F R Sbjct: 510 L---MACHTAVRAGQVLNEAEMRELLLKLEKTAVPGHCPHGRPTIVKIDFCQLEKDFKR 565 >gi|323441078|gb|EGA98785.1| DNA mismatch repair protein [Staphylococcus aureus O11] Length = 669 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 165/670 (24%), Positives = 305/670 (45%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISVEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PEIRIALISDGKTILSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQ------D 348 HP K +R + I+ IQ+A + + + L K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENR--------------LSTNDLLPSDDPTYSEDND 394 + + S + K F+ EN+ ++ D S N+ Sbjct: 359 RQNTENNQEKTFSSEESNSKPFMAENQNDEIVIKEDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIIS-----QTTDGLVIVDQH----------------- 432 E+ E + ++ Q + + Q + D + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSNDDTSVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 433 ---------------AAHERLIF--------EKMRQDFNSTKI-----TSQTLLTPEIID 464 A +E ++ E+++ ++ KI Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|150390306|ref|YP_001320355.1| DNA mismatch repair protein MutL [Alkaliphilus metalliredigens QYMF] gi|167017335|sp|A6TR78|MUTL_ALKMQ RecName: Full=DNA mismatch repair protein mutL gi|149950168|gb|ABR48696.1| DNA mismatch repair protein MutL [Alkaliphilus metalliredigens QYMF] Length = 637 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 184/644 (28%), Positives = 309/644 (47%), Gaps = 59/644 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I+ L IN+IAAGE++E P +KELIEN++DA + + I GGK + ++TDN Sbjct: 1 MPQIKLLDNLTINKIAAGEVVEGPYSIVKELIENAIDAGGTAITLEIKEGGKKYIRVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G++S+++ A RH TSKIS D S + GFRGEAL SI AVS + ++++P + Sbjct: 61 GIGISSDDVNRAFMRHSTSKISSLQDLSTTFSLGFRGEALASISAVSQVEMITKPKDQSY 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G I G +I++ + V GT + ++++FF P R F+KS Q ET I+++I R+A+ Sbjct: 121 GILTEIEGGEITNQKKVGCPTGTTMIIKNVFFNTPPRYKFMKSTQAETARISEMISRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + P ++F + + + +G I V ++F N + L+ + L G+ Sbjct: 181 SSPHIAFKYINN---QTTIFTTPGDGTLSSVILSVFEKNFFQNLIPLSVNKPALELDGFI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 F RGN + ++NGR ++ K I I AY IP+ +YP+ VL ++IDP D+ Sbjct: 238 SQVDFVRGNRSFQIFYVNGRYIKSKLISQAIEEAYKGKIPINKYPICVLNIKIDPEDADI 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP+K+ I+F I ++I + + +++ +S++ MI S + HL + Sbjct: 298 NVHPSKTEIKFHKEKEIYHYIYNYVTQVLSE----SSTISEIMMIPSTKNQHQQHHHLKE 353 Query: 358 YATSLTNTQEK-------------LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 S N Q K QE N D + V + Sbjct: 354 INLSQENIQSKESIGVKQQDKVMVADEQEKVKEYNSQYVMDSRPKVQPPPMVNTLKTEDT 413 Query: 405 Q----------------------------------LGIACAQIHQNYIISQTTDGLVIVD 430 Q Q+ YI+ + + ++D Sbjct: 414 QLNVASIISNELPVESRGIRTNPQLQKNFIKTYLQNYKVVGQLFNTYIVIEKDQSVYLID 473 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAAHE+L++ + ++ + SQ LLTP +++ + ++E+ + LG + E F Sbjct: 474 QHAAHEKLLYIQFHEELKKETVASQQLLTPVVLEFSHEDYITLIENISEFIPLGFELEAF 533 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 G N+I IR +P +L K + ++ID++ + + D I + +C +I++ Sbjct: 534 GQNSIIIRAVPLLLDKPKDYNFIFELIDQVKNEK--HVKPDYIREKIIQRSCKEAIKAMD 591 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + E+ +L+R++EK C HGRP + L + IEKLF R Sbjct: 592 ILDIQEIQQLIRDLEKLEPPLTCPHGRPILLTLTKNQIEKLFKR 635 >gi|332520997|ref|ZP_08397457.1| DNA mismatch repair protein MutL [Lacinutrix algicola 5H-3-7-4] gi|332043527|gb|EGI79723.1| DNA mismatch repair protein MutL [Lacinutrix algicola 5H-3-7-4] Length = 620 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 152/620 (24%), Positives = 294/620 (47%), Gaps = 35/620 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KEL+EN++DA ++ ++ ++ GK+ Q+ DNG G Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATHIKLILKDAGKTLIQVIDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI +DD ++T GFRGEAL SI A++H+ L ++ Q+ G Sbjct: 65 MSVTDARLSFERHATSKIKSADDLFQLNTKGFRGEALASIAAIAHVELKTKQEQDEVGTC 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G ++ S V GT + V++LFF IPAR NFLKS VET I D R+A+A+P Sbjct: 125 IVIEGSEVQSQDVVVTPKGTSLSVKNLFFNIPARRNFLKSNPVETRHIIDEFHRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F S + + N+ +RI + G V + E + + + G+ G P Sbjct: 185 SIGFVMYHNGSEVFNLPV----SNYRQRIVNIFGAKTNEKLVPVEEDTEVLKISGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + F+N R ++ ++ I +A+ + G + L L ++P+ +D+N+H Sbjct: 241 EFAKKTRGEQFFFVNDRFIKSAYLNHAIGSAFDGLLKDGAHASYFLNLTVNPQTIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM----ISSFHQDNAPKTHLP 356 P K+ I+F + + + +++ ++ + I+ + S+ Q P + Sbjct: 301 PTKTEIKFDDEHTLYAILRSAVKHSLGQFNIAPVLDFERDANLDTPYSYQQKGTPSVTVD 360 Query: 357 K------------------------YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 + + E L++ N + + + Sbjct: 361 SNFNPFAEEKTVSNTSSTVSSSNTSFKKTPAANWENLYVGLESKGNNIQQDFSEVHFESE 420 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 E + + Q H Y++S GL+++DQ+ AH+R+++E + + Sbjct: 421 QQNASIFEDKKIEQKQSTYQFHNKYVVSTIKSGLLLIDQNRAHQRVLYEDFLKHITVKEG 480 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 SQ LL P + E +I + DL G ++ + I +P ++ + + + Sbjct: 481 MSQQLLFPLELHFSPQEIEIIKQLQSDLEHTGFVFQKIEKEHVEITGVPVMVPESEVSII 540 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 L +I ++ ++ + + + +MA +I++G+ + ++E L+ + S Sbjct: 541 LEQLISDV-ENEVPDSNFSATDLLAKSMAKSLAIKTGQSLTAVEQEHLVNSLFACKAPSV 599 Query: 573 CNHGRPTFIKLKLSDIEKLF 592 R TF+ + + +++K F Sbjct: 600 SPTNRTTFVTMTVDELDKKF 619 >gi|325300053|ref|YP_004259970.1| DNA mismatch repair protein mutL [Bacteroides salanitronis DSM 18170] gi|324319606|gb|ADY37497.1| DNA mismatch repair protein mutL [Bacteroides salanitronis DSM 18170] Length = 619 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 165/621 (26%), Positives = 287/621 (46%), Gaps = 37/621 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + NQIAAGE+I+RP+ +KEL+EN++DA + +++ ++ GK+ Q+ D+G G Sbjct: 5 IRLLPDSVANQIAAGEVIQRPASVVKELVENAVDAGAHQIDVLVTDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + +A +RH TSKI + D +HT GFRGEAL SI AV+ + L + G + Sbjct: 65 MSETDARLAFERHATSKIREASDLFALHTMGFRGEALASIAAVAQVELRTCQEGEALGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G K+ VA G+ V++LF+ +PAR FLKS Q E + I R+A+ P Sbjct: 125 LLIAGSKVEEQEAVACPCGSNFSVKNLFYNVPARRKFLKSNQTELSNILAEFERIALVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SFT + + +RI V G+ + ++ ++ I + G+ G P Sbjct: 185 DISFTLYHNGTEMLNLPAI----QLRQRIMGVFGKKLNQELLSMDVTTSMIRMHGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + F+NGR ++ + I AY +P+G + E+DP +DVN+H Sbjct: 241 ETARKKGVRQFFFVNGRYMRHPYFHKAIAEAYERLVPVGEQVSYFIYFEVDPAHIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS---KKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + ++++ + + S I +F + P Sbjct: 301 PTKTEIKFENEQAIWQILSAAVKETLGRFNAVPSIDFDTEGMPDIPAFESSRQGRVTPPS 360 Query: 358 YATSLTNT------------------------QEKLFLQENRLSTNDLLPSDDPTYSEDN 393 + + E LF R + + + P Sbjct: 361 ASYDPSYNPFHVSSSVPPSSYSAASSFRKPTDWEPLFDGLERKTPVEPEAEEMPPEEPTL 420 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 E Q +YI++ GL+I++Q AH R+++++ + + Sbjct: 421 YDAHPEETVKEITTQH-YQYKGSYILTSVKSGLMIINQQRAHVRILYDRYMRQIADKRHV 479 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 SQ LL PE++ E ++ E +DL LG G + AI +PA + N +L+ Sbjct: 480 SQRLLFPEMVHFSASEIPVLEEIKDDLLALGFDLSNLGGGSYAINGVPAGIEGLNPERLV 539 Query: 514 RDIIDEIIDSSTTYTLQDRIENILA-TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 D++ I+ +++ ++++LA ++A +I G+ + S EMN L+ + + Sbjct: 540 TDLVQTAIEKG--VHVKEEVQSLLALSLAKASAIVPGQVLTSEEMNNLVDGLFAVSTPNY 597 Query: 573 CNHGRPTFIKLKLSDIEKLFG 593 G+ +K DIEKLF Sbjct: 598 TPDGKIVLAVVKEEDIEKLFK 618 >gi|310828244|ref|YP_003960601.1| hypothetical protein ELI_2657 [Eubacterium limosum KIST612] gi|308739978|gb|ADO37638.1| hypothetical protein ELI_2657 [Eubacterium limosum KIST612] Length = 649 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 178/652 (27%), Positives = 317/652 (48%), Gaps = 63/652 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI+ L+ + IN+IAAGE+I RP IKEL+EN++DA+S+RV + GGK+ +TDNG Sbjct: 1 MKIKMLNNETINKIAAGEVIVRPVSVIKELVENAIDADSTRVSVAVEKGGKTSICVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+P+A +RH TSKI +D +I T GFRGEAL SI A+S + + ++ + G Sbjct: 61 VGIAYNEVPLAFKRHATSKILKIEDLESIDTLGFRGEALSSISAISRVRITTKTAEEEIG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +Q G + R + GT + V DLF+ PAR L+ ++ E LI D++ +++++ Sbjct: 121 SQSFFEGGAFINQRVCTYDRGTEIMVTDLFYNTPARQKHLQKDKNEEKLIRDILEKLSLS 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P++SFT+ + +K GN + I + G DF ELN +++ + L+GY Sbjct: 181 HPEISFTYISDGREVFKTL---GTGNLKDVIESLYGRDFFKGLRELNVENSPMRLRGYIS 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 T R + FIN R V++K + AY + + ++PV ++ +++ R +DVN Sbjct: 238 DLTLTRSTREEQIFFINNRFVKNKSLSRAFEDAYEGYMMVHKHPVGIVFMDLPGRMLDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI------STSSVLSKKMISSFHQDNAPK 352 +HPAK+ I+ N +++ Q I+ + + + T++ + + P Sbjct: 298 IHPAKTEIQILNESLVSILFKQGIRDCLKAQNLVVDVSDVTAATELPEETARTKLVEEPV 357 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLL------------------------------ 382 + L + + T E QE+R L Sbjct: 358 SFLSGESKNFTPVDETSKAQEHRPPVPQLPKTKAVRQGAVREEAERQTQKVPAVEKMEAR 417 Query: 383 ------PSDDPTYSEDNDPVEESE-------------ATHYQLGIACAQIHQNYIISQTT 423 P P ++E +E+ ++ Q+ YI+ + Sbjct: 418 TPEPDVPEPLPVFTETQSTADETPRVAEPAPEYPRRKGPDFKNAKIIGQLFSTYILLEKG 477 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 D ++++DQHAAHE +++++++ F+ +Q+L+ P+ +++ E E +L R Sbjct: 478 DEIIMLDQHAAHEAFLYQELKERFDQKSDFPAQSLMVPQPVEISVREADHFDELQPELMR 537 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMAC 542 G + FG N + +R +P IL + LL+ I+ + + + + TM+C Sbjct: 538 YGFDCDLFGENTLMVRSVPIILGEPQDVSLLKAFIEGRVYEDVSD--PRNLIERIITMSC 595 Query: 543 YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 G+++ +++ E+ LL M + N C HGRP +KL+ +++KLF R Sbjct: 596 KGAVKGHQELSREEIETLLDGMSRLDNPYTCPHGRPIILKLREYELKKLFKR 647 >gi|255037559|ref|YP_003088180.1| DNA mismatch repair protein MutL [Dyadobacter fermentans DSM 18053] gi|254950315|gb|ACT95015.1| DNA mismatch repair protein MutL [Dyadobacter fermentans DSM 18053] Length = 629 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 175/627 (27%), Positives = 318/627 (50%), Gaps = 41/627 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + I NQIAAGE+++RP+ +KEL+EN++DA+++ V+ ++ G++ Q+ DNG G Sbjct: 7 IQLLPDSIANQIAAGEVVQRPASVVKELMENAIDAKATNVQVILREAGRTLIQVIDNGTG 66 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + M+ +RH TSKI S+D I T GFRGEAL SI AV+ + + +R + G Sbjct: 67 MSETDARMSFERHATSKIRQSEDLFRIRTMGFRGEALASIAAVAQVEMRTRQESDELGTL 126 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G +I + PVA GT +R+LFF +PAR NFLKS VE + D +R+A+A+P Sbjct: 127 IRIDGSEIKTQEPVACPKGTNFSIRNLFFNVPARRNFLKSNSVEMRHVLDEFQRVALAHP 186 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V FT + + + RI + G+ + E ++ I ++GY G P Sbjct: 187 EVGFTLHHNDTEVFNLQPV----KLVRRIIDIYGKSYREQLAYCQEDTSYIKVRGYIGKP 242 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F R + + F+N R ++ ++ + +A+ TIP G +P VL ++IDP +D+N+H Sbjct: 243 EFARKTRGEQFFFVNDRFIKHNYMHHAVISAFDGTIPEGSHPFYVLFIDIDPSHIDINIH 302 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK-------MISSFHQDNAPKT 353 P K+ I+F + + I+ +++KA+ +S S + + + P+T Sbjct: 303 PTKTEIKFDDERSVYAIIMAAVKKAVGVYNLSQSIDFEENINFLNPTTPTDPSPNLIPRT 362 Query: 354 HLPKYATSLTNTQEKL---------------------------FLQENRLSTNDLLPSDD 386 +P +A ++ F ++ + Sbjct: 363 VMPDWAAQPRKSEGNASKSNLTNWSKLFEGLQNTDDRHRELAAFEMNAPSASRPVYQEQA 422 Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 T + + + + Q+H YI+SQ DG++++DQ AA+ER+++E+ R+ Sbjct: 423 KTVASKVNRMASEVVAAPEADALLFQLHNRYILSQVKDGIMLIDQKAAYERILYERYRKM 482 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 + Q LL P+ I L + L+ E +++ LG + + FG N + IR IPA L + Sbjct: 483 LINRNGACQQLLFPKTIRLTHSDMQLVHETKKEIRSLGFEFDEFGTNELIIRGIPADLPE 542 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 ++ L ++I+++ S + L + E++ ++A S+R K+ +E++ L+ ++ Sbjct: 543 ESEQDLFEELIEQLKQSYSDLKLN-KPESLSRSLAKRFSVRYAVKLSHMEIHTLMNQLFS 601 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + + ++ G P + L + + +F Sbjct: 602 SSDPNRTPGGDPIIVLLTMDKLANIFR 628 >gi|220917323|ref|YP_002492627.1| DNA mismatch repair protein MutL [Anaeromyxobacter dehalogenans 2CP-1] gi|254766155|sp|B8J9F5|MUTL_ANAD2 RecName: Full=DNA mismatch repair protein mutL gi|219955177|gb|ACL65561.1| DNA mismatch repair protein MutL [Anaeromyxobacter dehalogenans 2CP-1] Length = 607 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 173/607 (28%), Positives = 299/607 (49%), Gaps = 17/607 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L ++NQIAAGE++ERP+ +KEL+EN+LDA ++ V + GG + ++ D+G Sbjct: 3 RIHVLPPGLVNQIAAGEVVERPASIVKELVENALDAGATSVGVDVEEGGLALVRVADDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A++RH TSK+ D + I T GFRGEA+P+I +VS L + ++ G Sbjct: 63 GMDRDDALLALERHATSKLRDAEGLAAIGTMGFRGEAVPAIASVSRFRLDTSAGEDGAGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G + V PVA GT VEVRDLFF PAR F+++ E +++ + R+A+A Sbjct: 123 RVEIEGGVLGEVAPVARPRGTTVEVRDLFFNTPARRKFMRAASTEAGHVSEAVIRLALAR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V FT + G +R Q +G + + + ++ + E+ + G Sbjct: 183 PDVGFTLRSAGRLVLGARAG---GGLADRAGQALGREAHRHLLPVDARRGEVRVHGLICS 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + Y+F+NGR V+D+ + A+A T+P GR+P VL +E+ +VDVNV Sbjct: 240 PDHSEATGRALYLFVNGRYVRDRAAAHAVLRAFAGTLPPGRHPAGVLFVELPLHRVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH-----------QD 348 HP K +RF + + + ++ A+ + + + + ++ Sbjct: 300 HPQKLEVRFAEGREVFDALFHTVAGALRTAPWLRARPQPGDGVPAGNGGGPAPVPVAGEE 359 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 A + A + L L ++ Sbjct: 360 AAEVLAWARAARPPEGSGATLVQPAPGAWATGRLAFPVAPAPGAGPEAGPRPEGYFAALR 419 Query: 409 ACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 Q + Y++ + G LV++DQHA+HER++F ++R+ F + +I Q L P+++ L Sbjct: 420 YVGQHARTYLLCEAPGGTLVVIDQHASHERMLFHRLREAFRARRIPVQPFLLPQVVTLPP 479 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 + +L RLG AE FG A A++ PA L+ ++ LL D+ ++ + Sbjct: 480 AAARALEAGLAELGRLGFDAEPFGGEAFAVKGAPAALAGVDLTALLTDLGSQLAEVERGS 539 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 + D ++LATMAC+ ++R+ + + E LL ++ ++C HGRP +L L+D Sbjct: 540 AVDDAFHDLLATMACHAAVRANQDVSPEEARALLDGLDAIDFKARCPHGRPVVFELSLAD 599 Query: 588 IEKLFGR 594 +E+ GR Sbjct: 600 LERRVGR 606 >gi|73748885|ref|YP_308124.1| DNA mismatch repair protein, MutL [Dehalococcoides sp. CBDB1] gi|73660601|emb|CAI83208.1| DNA mismatch repair protein, MutL [Dehalococcoides sp. CBDB1] Length = 566 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 183/599 (30%), Positives = 316/599 (52%), Gaps = 39/599 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + I +IAAGE+IERP+ +KEL+ENSLDAE+ RV+ VI GG + +++D+G Sbjct: 1 MPIKLLDKATIARIAAGEVIERPASVVKELLENSLDAEAKRVDIVIREGGIGYIEVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+TS E+ +A +RH TSK+S +D I + GFRGEALPSI AV+ L +++ +G Sbjct: 61 CGITSSEVLLAFERHATSKLSSFEDIYAIASLGFRGEALPSIAAVADLEMLTAVRTEESG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++SG ++ +A GT + + LF +PARL FLK+ Q E + +T+V+ A+A Sbjct: 121 TYLSLSGGEMLKHTRMARAAGTSIRLSRLFSRVPARLKFLKTPQHEASKVTEVVVSYALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE---ITLQG 235 YP+V F+ + N NG + + +V G D + ++L + I + G Sbjct: 181 YPEVKFSLNVDGRNTLN---TPGNGKLRDAVLEVYGSDAASKMLDLENDTYRSSAINISG 237 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 P +R N N + F+N R +Q + + + AY+ + GRYP+ V+ + + V Sbjct: 238 LVSPPEVSRSNRNSLHFFVNRRLIQSRALQRAVEQAYSGLLTAGRYPMGVINIRLSGALV 297 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVN+HP K+ ++F + + + + ++++ + + H + A + Sbjct: 298 DVNIHPTKAEVKFSDESAVFTSVQRAVRSVLVE------------KPPLLHVEEARPVYQ 345 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 P+ QE ++ + +L + S + ++ ++ + L Q+ Sbjct: 346 PE-----AGRQEHIWAEVQKLPNANT--------SYISPVIQSAKTSSLPLLRLVGQVGG 392 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 Y++++ DGL I+DQHAAHER+ +E++ + S + Q+LL P I++L + A+I + Sbjct: 393 LYLLAEGPDGLYIIDQHAAHERIRYEEIAAETYSAR-ACQSLLEPFILELNPVQEAMIEK 451 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 +L +G + E FG ++ IPA L LL ++ D D+ + E Sbjct: 452 CKSELELMGFEMEEFGRRVYRVKSIPAGLKAHQAKALLAELADNPKDAPA-----EIKER 506 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ MAC+ ++R+G+ + EM LL ++EK C HGRPT +K+ S +EK F R Sbjct: 507 LIRLMACHTAVRAGQVLTDAEMRELLLKLEKTGIPGHCPHGRPTIVKIDFSQLEKDFKR 565 >gi|258645505|ref|ZP_05732974.1| putative DNA mismatch repair protein MutL [Dialister invisus DSM 15470] gi|260402859|gb|EEW96406.1| putative DNA mismatch repair protein MutL [Dialister invisus DSM 15470] Length = 645 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 181/647 (27%), Positives = 307/647 (47%), Gaps = 61/647 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L E NQIAAGE++ERP A+KEL+ENS+DA + +E IA GG ++ ++TD+G G Sbjct: 4 IHILDEVTSNQIAAGEVVERPVNAVKELVENSIDAGAHMIEVEIADGGMTYIRVTDDGSG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 MT E+ ++V RH TSKIS ++ +I + GFRGEALPSI +VS T+ +R ++ G Sbjct: 64 MTREDAKLSVIRHATSKISSVENIYHICSLGFRGEALPSIMSVSRTTITTRRAEDMEGTA 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++G + ++ V GT VEVR+LF+ +PAR FLKSE+ E++ I +I ++A+A P Sbjct: 124 IDVTGGAVEKIKGVGAPAGTTVEVRELFYNVPARKKFLKSERTESSRINTMIGKLALANP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SFT + NG + IS + G +E+ + + + G P Sbjct: 184 DISFTLINNGR---TVIETPGNGRLMDVISALYGVKVTGEMLEVESEGEDSVMTGMISKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + + + IN R V+ + + AY +P YP++VL + P +DVNVH Sbjct: 241 SLLKSSRQNQTIIINRRVVESAVVTKAVDNAYHSLLPKNGYPIMVLTFTLPPESIDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV------------------------ 336 P K I+F + I + ++ + + S V Sbjct: 301 PQKREIKFDDEQKIFRLVYHAVLNTLTSQSAPDSIVKDMIKEPAHQVPLGTELDLSKVVV 360 Query: 337 -----------------LSKKMISSFHQDNAPKTHLPKY------------ATSLTNTQE 367 + +K S ++ Y + S T+ + Sbjct: 361 EDKQLGAHDIGLTEADGVVQKPQPSVPVQSSWNESFSSYGNRDFRKSEHAVSRSGTDFET 420 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLV 427 K E +T + + + +++P+ E A I Q+ +I+ Q L Sbjct: 421 KQTRSEILSTTPVFIKPHEESMKAESEPLFEVPAEKDDPVIPLGQVADCFILCQHGSDLF 480 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 I+DQHAAHER+ +++ + I Q +L P +ID+ + L+ E +E++ +LGI Sbjct: 481 IIDQHAAHERVRYDRF--AAKTDGIPVQAILIPYLIDVEPEDMDLLFEKEEEIKKLGITF 538 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR 547 E+ G + I I P S+ ++ ++++D++ D + + ++A AC G+I+ Sbjct: 539 EQAGRDVIRITGAPEDFSENDMDRIIKDLLFTFHDENMPSP-ETLRHRMMAYAACRGAIK 597 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 G + +M L+ ++ C HGRPT +K ++ +LF R Sbjct: 598 RGDPLNVRQMKELITDLFHTTRPFVCPHGRPTIVKFTPDELGRLFDR 644 >gi|289432881|ref|YP_003462754.1| DNA mismatch repair protein MutL [Dehalococcoides sp. GT] gi|288946601|gb|ADC74298.1| DNA mismatch repair protein MutL [Dehalococcoides sp. GT] Length = 566 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 183/599 (30%), Positives = 317/599 (52%), Gaps = 39/599 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + I +IAAGE+IERP+ +KEL+ENSLDAE+ RV+ VI GG + +++D+G Sbjct: 1 MPIKLLDKATIARIAAGEVIERPASVVKELLENSLDAEAKRVDIVIREGGIGYIEVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+TS E+ +A +RH TSK+S +D I + GFRGEALPSI AV+ L +++ +G Sbjct: 61 CGITSSEVLLAFERHATSKLSSFEDIYAIASLGFRGEALPSIAAVADLEMLTAVRTEESG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++SG ++ +A GT +++ LF +PARL FLK+ Q E + +T+V+ A+A Sbjct: 121 TYLSLSGGEMLKHTRMARAAGTSIKLSRLFSRVPARLKFLKTPQHEASKVTEVVVSYALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE---ITLQG 235 YP+V F+ + N NG + + +V G D + ++L + I + G Sbjct: 181 YPEVKFSLNVDGRNTLN---TPGNGKLRDAVLEVYGSDAASKMLDLENDTYRSSAINISG 237 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 P +R N N + F+N R +Q + + + AY+ + GRYP+ V+ + + V Sbjct: 238 LVSPPEVSRSNRNSLHFFVNRRLIQSRALQRAVEQAYSGLLTAGRYPMGVINIRLSGALV 297 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVN+HP K+ ++F + + + + ++++ + + H + A + Sbjct: 298 DVNIHPTKAEVKFSDESAVFTSVQRAVRSVLVE------------KPPLLHVEEARPVYQ 345 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 P+ QE ++ + +L + S + ++ ++ + L Q+ Sbjct: 346 PE-----AGRQEHIWAEVQKLPNANT--------SYISPVIQSAKTSSLPLLRLVGQVGG 392 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 Y++++ DGL I+DQHAAHER+ +E++ + S + Q+LL P I++L + A+I + Sbjct: 393 LYLLAEGPDGLYIIDQHAAHERIRYEEIAAETYSAR-ACQSLLEPFILELNPVQEAMIEK 451 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 +L +G + E FG ++ IPA L LL ++ D D+ + E Sbjct: 452 CKSELELMGFEMEEFGRRVYRVKSIPAGLKAHQAKALLAELADNPKDAPA-----EIKER 506 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ MAC+ ++R+G+ + EM LL ++EK C HGRPT +K+ S +EK F R Sbjct: 507 LIRLMACHTAVRAGQVLTDAEMRELLLKLEKTGIPGHCPHGRPTIVKIDFSQLEKDFKR 565 >gi|325289885|ref|YP_004266066.1| DNA mismatch repair protein mutL [Syntrophobotulus glycolicus DSM 8271] gi|324965286|gb|ADY56065.1| DNA mismatch repair protein mutL [Syntrophobotulus glycolicus DSM 8271] Length = 663 Score = 471 bits (1213), Expect = e-130, Method: Composition-based stats. Identities = 188/660 (28%), Positives = 307/660 (46%), Gaps = 70/660 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L++ INQIAAGE++ERP +KEL+ENSLDA + +E + G G + ++ D+G Sbjct: 4 RIKILNQLCINQIAAGEVVERPLSVVKELVENSLDAGAEHIEITVEGNGTALIRVRDDGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+ AV H TSKIS +D + T GFRGEALPSI +VS + ++SR + GA Sbjct: 64 GIAPEELQTAVLPHATSKISHIEDLDTLATLGFRGEALPSIASVSRMEIVSRTADSALGA 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++I ++ + GT V +RDLF+T PAR FLKS+ E LI+D++ ++A+ Sbjct: 124 RLSIENSEVKNFEETGCPKGTTVTIRDLFYTTPARYKFLKSQGTEFGLISDMVSKLALTK 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F K + +G+ I+ V+G V ++ + + GY + Sbjct: 184 PAVRFILKHAKHTVFM---SPGDGSLRHVIASVMGSQIAQKLVPVSFCNEHYAVSGYLSM 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR ++ K + ++ ++ IP YP+VVL +E+ P DVNV Sbjct: 241 PDLTRNNGNYQVLMINGRIIRSKQLRQAVKNSFHTLIPHNTYPIVVLNIELSPSLYDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKA-----------------------------INKKG 330 HP+K I+F+ + F+ + KA I+ Sbjct: 301 HPSKMEIKFKQENELMTFLTAQLNKAVLDGRKIERIDLHPPAFGQAKETSLFLNEISDSL 360 Query: 331 ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENR--------------- 375 + +V ++ F + + + T LF Q + Sbjct: 361 KESQTVYARNKDFDFRSKSNTSSRHTEQPMETVETLSDLFRQSKQNEIESNPRGINHQEA 420 Query: 376 -----------LSTNDLLPSDDPTYSEDNDPVEESEATHYQL----------GIACAQIH 414 ++TN + + + ++ +D ++ T + A QI Sbjct: 421 ITGKNINDLTEINTNAIDTNINHIANDPSDIKDKINHTDHFNDLNSVNPLGNLRALGQIM 480 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 YI++ L I+DQHAAHER+ EK+ + F SQ LL P + L E +++ Sbjct: 481 GTYILATDDQSLYIIDQHAAHERITVEKLYRSFQKDTPDSQLLLLPITLTLSVHEEQIVL 540 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 + E + G E+FG +R +P I + ++ IDE++ TT +L++ IE Sbjct: 541 SNFELFRKSGFILEQFGDRTYLLRGVPLIKNLDKPEEIFLSFIDELMKDRTTVSLENIIE 600 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + T AC SI+ + +M LL + + N C HGRP I++ ++ K F R Sbjct: 601 KWIFTAACRNSIKGNDYLSIPDMQALLFNLSRAENPYTCPHGRPVIIEITQEELTKKFKR 660 >gi|260591266|ref|ZP_05856724.1| DNA mismatch repair protein MutL [Prevotella veroralis F0319] gi|260537131|gb|EEX19748.1| DNA mismatch repair protein MutL [Prevotella veroralis F0319] Length = 623 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 169/623 (27%), Positives = 305/623 (48%), Gaps = 39/623 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ IKEL+EN++DA ++ + ++ G++ Q+ DNG G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGATSINVLVVDAGRTSIQVIDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI DD ++HT GFRGEAL SI AV+ + L +R ++ G Sbjct: 65 MSETDARLSFERHATSKIRKADDLFSLHTMGFRGEALASIAAVAQIELKTRMANDDLGTH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++ISG + ++ P + G+ V +LFF +PAR FLKS E N I + R+ + YP Sbjct: 125 LSISGSRFTNQEPCSCPVGSNFLVENLFFNVPARRKFLKSNTTELNNIINAFERIVLVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++FT + + + + N+ +RI +V G+ + + ++ ++ + G+ G P Sbjct: 185 HIAFTLYSNGTELFNLRSC----NYRQRIVEVFGKRLNQDLLSIDVDTSLCHIHGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Q Y F+N R ++ + + TA+ IP G L E+ P +DVN+H Sbjct: 241 ESARKKTPQQYFFVNERYMKHPYFHKAVITAFDRLIPQGEQIPYFLYFEVPPTNIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ-DNAPKTHLPKYA 359 P K+ I+F N I ++ ++++A+ + S + D T PK Sbjct: 301 PTKTEIKFENEQAIWQILLAAVKEAVGRFNDIPSIDFDTEGKPDIPVFDPHSGTKAPKVE 360 Query: 360 TSLTNTQEKLFLQENRLSTND-----------------------------LLPSDDPTYS 390 + + K Q + S D P+D+ Sbjct: 361 INPSFNPFKQTAQPQKPSVPDGWEELYSGLDGNAEIRQSKLFEQDDLDVNTTPTDESLII 420 Query: 391 EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 +E+ + + Q +YI++ GL+I+DQH AH R+++E+ + +S Sbjct: 421 SSASTTSTNESMIEEKSPSHYQYKGSYIMTAVKSGLMIIDQHRAHIRILYEEYLRQLSSH 480 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 K SQ +L PE++ + +I ++ +G + + G ++ A+ +PA + N Sbjct: 481 KAHSQKVLFPEVVQFTVSDKLIIDRILPEMAEMGFQLDSLGGDSYAVNGVPAGIEGLNAV 540 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILA-TMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L++D++ ++S + +++ I+ LA ++A +I G+ + + EM+ L+ E+ N Sbjct: 541 SLIQDMVASAVESGAS--VKEDIDRTLALSLARNAAIPQGQVLTNSEMDNLVNELFTCEN 598 Query: 570 SSQCNHGRPTFIKLKLSDIEKLF 592 + G P +K DIE LF Sbjct: 599 VNYTPSGEPIIAVMKQHDIEHLF 621 >gi|88803291|ref|ZP_01118817.1| putative DNA mismatch repair protein [Polaribacter irgensii 23-P] gi|88780857|gb|EAR12036.1| putative DNA mismatch repair protein [Polaribacter irgensii 23-P] Length = 604 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 159/603 (26%), Positives = 301/603 (49%), Gaps = 18/603 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KELIEN++DA ++ ++ ++ GK+ Q+ D+G G Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELIENAIDAGATNIKLLLKDAGKTLIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M++ + M+ +RH TSKI ++D N++T GFRGEAL SI A+SH+ L ++ + G Sbjct: 65 MSATDARMSFERHATSKIQKAEDLFNLNTKGFRGEALASIAAISHVELKTKRSDDELGTG 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G K+ S ++ GT V++LF+ IPAR NFLKS+ VET I D +R+A+A+P Sbjct: 125 IKIEGSKVISQDFISTGKGTSFAVKNLFYNIPARRNFLKSDTVETRHIIDEFQRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF + Y + GN +RI V G V +NEK++ + +QG+ P Sbjct: 185 DISFLLHHNNNEIYHLK----EGNLRQRIVAVFGIKMNEKLVPINEKTDLVAIQGFIAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F++ + + F+N R ++ ++ + +A+ + G +P L L + +D+N+H Sbjct: 241 EFSKRKRGEQFFFVNNRFIKSSYLNHAVVSAFDGLLESGAHPSYFLYLTVPANSIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ I+F N ++ + +++ ++ + ++ ++ + P + Sbjct: 301 PTKTEIKFDNEKVLYAILRATVKHSLGQYNVAPVLDFNRDAGLDTPYNFQPNSKGTALPK 360 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN-----------DPVEESEATHYQLGIA 409 + F +E + N + T S ++ E + Sbjct: 361 VFVDPDFNPFKEEFQKEINFPFKREKETQSWESLYTAVDASDAGQNASLFEHLEEEKTQK 420 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 QI + Y++S G+V+++Q AH+R+++E+ + + SQ LL P I E Sbjct: 421 TFQIQRKYVMSLIKSGVVLINQSLAHQRILYEQFLESITIKEANSQQLLFPVQISFSSAE 480 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 +I +L G + F +++ I+ IP +++ I +L +++++ +D T Sbjct: 481 IEMIYTIKTELENAGFSFDEFTKDSVTIKGIPISVTESKISIILEELLND-MDLEVPDTS 539 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 + + + A +I++G ++ E L+ ++ + G+ +F L L I+ Sbjct: 540 FSHFDVMAKSFAKTLAIKTGTRLSEKEQESLVNDLFSCKEPTISPFGKASFKTLTLQQID 599 Query: 590 KLF 592 LF Sbjct: 600 HLF 602 >gi|197122538|ref|YP_002134489.1| DNA mismatch repair protein [Anaeromyxobacter sp. K] gi|229890120|sp|B4UCW3|MUTL_ANASK RecName: Full=DNA mismatch repair protein mutL gi|196172387|gb|ACG73360.1| DNA mismatch repair protein MutL [Anaeromyxobacter sp. K] Length = 607 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 173/607 (28%), Positives = 297/607 (48%), Gaps = 17/607 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L ++NQIAAGE++ERP+ +KEL+EN+LDA ++ V + GG + ++ D+G Sbjct: 3 RIHVLPPGLVNQIAAGEVVERPASIVKELVENALDAGATSVGVDVEEGGLALVRVADDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A++RH TSK+ D + I T GFRGEA+P+I +VS L + ++ G Sbjct: 63 GMDRDDALLALERHATSKLRDAEGLAAIGTMGFRGEAVPAIASVSRFRLDTSAGEDGAGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G + V PVA GT VEVRDLFF PAR F+++ E +++ + R+A+A Sbjct: 123 RVEIEGGVLGEVAPVARPRGTTVEVRDLFFNTPARRKFMRAASTEAGHVSEAVIRLALAR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V FT + G +R Q +G + + + ++ + E+ + G Sbjct: 183 PDVGFTLRSGGRLVLGARAG---GGLADRAGQALGREAHRHLLPVDARRGEVRVHGLICS 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + Y+F+NGR V+D+ + A+A T+P GR+P VL +E+ +VDVNV Sbjct: 240 PDHSEATGRALYLFVNGRYVRDRAAAHAVLRAFAGTLPPGRHPAGVLFVELPLHRVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV-----------LSKKMISSFHQD 348 HP K +RF + + + ++ A+ + + ++ Sbjct: 300 HPQKLEVRFAEGREVFDALFHTVAGALRTAPWLRARPQPGDGVPVGDGGGPAPVPVAGEE 359 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 A + A + L L ++ Sbjct: 360 AAEVLAWARAARPPEGSGATLVQPAPGAWATGRLAFPVVPAPGAGPEAGPRPEGYFAGLR 419 Query: 409 ACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 Q + Y++ + G LV++DQHA+HER++F ++R+ F + +I Q L P+++ L Sbjct: 420 YVGQHARTYLLCEAPGGTLVVIDQHASHERMLFHRLREAFRARRIPVQPFLLPQVVTLPP 479 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 + +L RLG AE FG A A++ PA L+ ++ LL D+ ++ + Sbjct: 480 AAARALEAGLAELGRLGFDAEPFGGEAFAVKGAPAALAGVDLTALLTDLGSQLAEVERGS 539 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 + D ++LATMAC+ ++R+ + + E LL ++ ++C HGRP +L L+D Sbjct: 540 AVDDAFHDLLATMACHAAVRANQDVSPEEARALLDGLDAIDFKARCPHGRPVVFELSLAD 599 Query: 588 IEKLFGR 594 +E+ GR Sbjct: 600 LERRVGR 606 >gi|126663375|ref|ZP_01734373.1| DNA mismatch repair protein [Flavobacteria bacterium BAL38] gi|126625033|gb|EAZ95723.1| DNA mismatch repair protein [Flavobacteria bacterium BAL38] Length = 617 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 160/615 (26%), Positives = 301/615 (48%), Gaps = 30/615 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KEL+EN++DA++S ++ ++ GK+ Q+ DNG G Sbjct: 6 IQLLPDHVANQIAAGEVVQRPASVVKELLENAVDAKASDIKLIVKEAGKTLVQVIDNGLG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M + + + +RH TSKI +D ++HT GFRGEAL SI A++H+ + ++ Q G Sbjct: 66 MNTTDARLCFERHATSKIRQAEDLFDLHTKGFRGEALASIAAIAHVEMKTKQDQEELGNH 125 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G K+ + GT V++LFF IPAR NFLKSE VE + D +R+A+A+P Sbjct: 126 IVIEGSKLVKQEVAVLPKGTSFAVKNLFFNIPARRNFLKSETVEFRHVMDEFQRVAMAHP 185 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SFT S Y + N+ +RI + G V + E ++ IT+ G+ G P Sbjct: 186 SISFTLIHNGSELYNLPS----SNYRQRIVNIFGGKTNEKLVPVTEDTDLITISGFVGKP 241 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + + F+N R ++ ++ I AY + G P L L++ P +D+N+H Sbjct: 242 EFAKKSRGEQFFFVNDRYIKSAYLHHAIMNAYEGLLKEGNQPSYFLYLQVPPHTIDINIH 301 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM--------------ISSFH 346 P K+ I+F + + + +++ ++ + ++ + + Sbjct: 302 PTKTEIKFDDEHSLYAILRSAVKHSLGQFNVAPVLDFERDANLDTPYQYKNKDADFPTIQ 361 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT---- 402 D+ + T ++ + N + L E + E+E Sbjct: 362 VDSNFNPFANEKPTKSLSSFGSYKKETNTANWESLYVGLKQDTQELDTFSFETEEVTSKL 421 Query: 403 -----HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 ++ + QIH+ YI+S G++++DQ AH+R+++E+ + K +SQ L Sbjct: 422 FDDELEEKVPTSTYQIHKKYIVSAIKSGMLVIDQGRAHQRILYEQFLTNITVNKASSQQL 481 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P + E L+ E L G + F +++ I +P +++ + ++ ++I Sbjct: 482 LFPLELYFSSDEMILLKELQPVLENTGFVFDAFNSDSLQISGLPIAMAESEVSIVIEELI 541 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 + + + + + ++I +MA ++++G + E L+ + + + + Sbjct: 542 NNLQNEIPESSF-SQSDSIAKSMAKSMAVKTGTYLTVKEQENLVNSLFACKDPNVSPFQK 600 Query: 578 PTFIKLKLSDIEKLF 592 PTFI L + D++K F Sbjct: 601 PTFITLTVEDLDKRF 615 >gi|317504763|ref|ZP_07962723.1| DNA mismatch repair protein MutL [Prevotella salivae DSM 15606] gi|315664145|gb|EFV03852.1| DNA mismatch repair protein MutL [Prevotella salivae DSM 15606] Length = 610 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 167/609 (27%), Positives = 290/609 (47%), Gaps = 25/609 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ IKEL+ENS+DA + ++ + GK+ +TD+G G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENSVDAGAKNIQIQVIDAGKTTILVTDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M++ + ++ +RH TSKI DD +HT GFRGEAL SI AV+ + L +R + G Sbjct: 65 MSATDARLSFERHATSKIRKADDLFALHTMGFRGEALASIAAVAQIELKTRQESDEVGTL 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++ISG + P + G+ V +LF+ +PAR FLKS E N I R+A+ YP Sbjct: 125 LSISGSRFVGQEPCSCAVGSSFSVNNLFYNVPARRKFLKSNSTELNNIITAFERIALVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++FT + + + + G +RI + G+ + + + + GY G P Sbjct: 185 DIAFTLQSNGTELFNLKA----GVLRQRIIDIFGKRLNQELLSVKVDTTMCRINGYVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + A+ +P G L E+ P+ +DVN+H Sbjct: 241 ESARKKGAHQYFFVNGRYMKHPYFNKAVMAAFERLVPTGEQVPYFLYFEVAPKDIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS---------------- 344 P K+ I+F N I + ++++A++ S + Sbjct: 301 PTKTEIKFENEVPIWQILSAAVKEAVSMFNDIPSIDFDTEGRPEIPVYNPTKNVEVPKVK 360 Query: 345 FHQDNAP--KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 ++ D P + ++S +N E+L+ + S L S T + + E +E Sbjct: 361 YNPDYNPFRNSSEAPRSSSPSNRWEELYQNLQKPSQETELFSSKMTLPDIQEEEEPTENV 420 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + + Q YI++ GL+I+DQH AH R++F++ ++ ++ +Q LL PE Sbjct: 421 IEEKSPSHYQYKGRYIMTAVKSGLMIIDQHRAHVRILFDRYQEQLKRSEAAAQKLLFPEN 480 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 + E + + +L LG + G + AI +P+ L ++ LLRD+I + Sbjct: 481 LHCTASEEVTLSKILPELQDLGFEISPLGGSTYAILAVPSGLEGLDMINLLRDMILSAQE 540 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 T ++ + TMA +I G+ + + EM + + + N + G+ Sbjct: 541 KPTNL-REEISRELALTMARKAAIPQGQVLNNAEMENIFNSLFSSSNPNYTPDGKNILCI 599 Query: 583 LKLSDIEKL 591 LK ++IE L Sbjct: 600 LKQNEIEHL 608 >gi|189218041|ref|YP_001938683.1| DNA mismatch repair enzyme MutL [Methylacidiphilum infernorum V4] gi|189184899|gb|ACD82084.1| DNA mismatch repair enzyme MutL [Methylacidiphilum infernorum V4] Length = 595 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 169/596 (28%), Positives = 300/596 (50%), Gaps = 20/596 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L+E+++NQIAAGE++ERP+ +KEL+EN++DA +++++ GG S+ ++ D+G Sbjct: 4 KIHILTEEVVNQIAAGEVVERPASILKELLENAIDAGATQIDVETRSGGISWIKVKDDGC 63 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E+ + ++RH TSK+ DDFS + T+GFRGEA+P+I +V+ L L ++ G Sbjct: 64 GMSKEDALLCLERHATSKLFSMDDFSRLSTYGFRGEAIPAIASVTKLILATQERDCPEGV 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + G I V A GT V LF+ +P RL FLKS + E + + A+++ Sbjct: 124 IIEVHGGTIIRVEETAGLVGTSVSTSSLFYNLPPRLKFLKSPRTELLHLQRQLIFAALSH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ F ++ + + +RI V+GE++ + + + G Sbjct: 184 PEIGFRYNH---SPGGKGGWEKGEDLRQRIISVLGEEWEKELCWIEREDEGFRIYGAVSK 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + + F+N R V+ K + AY ++ G YP+ VL +E+ P ++DVNV Sbjct: 241 PGVGRPSKEDMFFFVNKRPVESKSFYLGVIDAYRNSLMKGLYPLCVLFVEVHPGEIDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RF+ R+F+ ++I ++ +S+++ +K D++ Sbjct: 301 HPTKKEVRFKREYAFRDFVHKAILGELSSYKPFSSALMEEKGYDRMLPDSSKAVAQKSSC 360 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 S+ E+LF ++ L + + YI Sbjct: 361 ISVEAQMEELFDKQPVFHAKALE--------------DNEQKEKINPYKIVGLFSSLYIA 406 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 +T +G++++DQHAAHER++FEK+ F S + SQ L+TP +I L E A++ Sbjct: 407 IETAEGIMLIDQHAAHERVLFEKLLLQFESMQKHSQKLITPLLISLSSTESAILSHSLPF 466 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 +LG + FG ++ + IP+ + + + Q R+++ E++++ Sbjct: 467 FEQLGFEVRPFGLSSFLLESIPSGVKRMDYEQFFREVLAELVETDRQKKTARFYWQRDIA 526 Query: 540 MA-CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +A C +I+SG + E L++ + + C HGRPT+I++ +IEK FGR Sbjct: 527 LAVCRQAIKSGDPLTKEEQEELVKNLFACKLPNTCPHGRPTWIRISFQEIEKRFGR 582 >gi|315924592|ref|ZP_07920811.1| DNA mismatch repair protein MutL [Pseudoramibacter alactolyticus ATCC 23263] gi|315622122|gb|EFV02084.1| DNA mismatch repair protein MutL [Pseudoramibacter alactolyticus ATCC 23263] Length = 636 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 173/636 (27%), Positives = 309/636 (48%), Gaps = 48/636 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L+ + I +IAAGE+I RP+ +KELIEN++DA S+RV ++ GGK ++ DNG Sbjct: 3 KIKMLNHETIEKIAAGEVIVRPASVVKELIENAIDAGSTRVAIIVEKGGKKRIRVADNGA 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EIP+A RH TSK+S D + + T GFRGEAL SI AVS + + + G+ Sbjct: 63 GIHYHEIPLAFTRHATSKLSTISDLNTLDTLGFRGEALASIAAVSRIVVKTIASDEEMGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G ++ + R + N GT ++V DLF+ +PAR ++ ++ E I D++ R+A+++ Sbjct: 123 ETLLEGGRVVNQRVMPFNRGTDIDVSDLFYNVPARQKHMQKDKTEGMAIHDLMERLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT++ ++ +G + I+ + G F+N+ LN + + L+GY G Sbjct: 183 PEIAFTYTADGR---RVFSTPGSGELSDVIACLYGRSFLNSLHPLNVANAPMRLEGYIGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 T R + ++ F+N R ++K + TAY + ++PV ++ +E+ + +DVN+ Sbjct: 240 LTAMRSSRDRQLFFMNSRVFENKALSHAFETAYEGYLMHHKHPVGIVFIELPGKMLDVNM 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN-------------------------------- 327 HPAK+ I N +++ Q I+ + Sbjct: 300 HPAKTEIGILNQSLVDILFRQGIRTTVRAMDLTVDLGKALDEEPAVAKFVPTEEAQAFEE 359 Query: 328 ----KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 + I + ++ + A T + + +L Q + DL P Sbjct: 360 VPGEQMQIKEQTPFFDVPENAPVPNQALTTFRAVSSFEAPEQKSQLLRQTVSVKPPDLSP 419 Query: 384 SDDPTYSEDNDPVEESEATHYQLG----IACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 T E E ++A L + Q+ + ++I + ++++DQHAAHE + Sbjct: 420 EAAATVHESLQDYEAAKAGRPHLDLSDAVVIGQLFKTFVILEKGREVILIDQHAAHEAFM 479 Query: 440 FEKMRQDF-NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 FE+ R+ F +QTL+ PE +D+ A E L R G + FG + +R Sbjct: 480 FEQYRKQFLTDAAADAQTLMVPEPVDISAKLMACFEELKPALLRKGYDCDVFGDTTLMVR 539 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 +P IL + L+ ++ ++ L+++ +ATMAC +++ + + E+ Sbjct: 540 SVPLILGEPQPTALVPLWMEALLT--GDRELREKRWLKVATMACKAAVKGNQDLTPEEIQ 597 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L+ + + N C HGRP + L ++EKLF R Sbjct: 598 TLIDALMRLENPYTCPHGRPIILHLSQYELEKLFKR 633 >gi|297617260|ref|YP_003702419.1| DNA mismatch repair protein MutL [Syntrophothermus lipocalidus DSM 12680] gi|297145097|gb|ADI01854.1| DNA mismatch repair protein MutL [Syntrophothermus lipocalidus DSM 12680] Length = 571 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 180/596 (30%), Positives = 306/596 (51%), Gaps = 28/596 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+I L + ++N IAAGE+IERP+ +KEL+EN++DA ++R+E + GGG + DNG Sbjct: 1 MRIHVLPDSLVNLIAAGEVIERPASVVKELVENAVDASATRIEISVKGGGIDEIVVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM EE+ +A RH TSKI+ D NI T GFRGEALPSI AV+ + +++ + G Sbjct: 61 HGMEQEELALAFTRHATSKIASKPDLYNIRTLGFRGEALPSIAAVAKVEVLTASREGE-G 119 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++I+I+G ++ V P GT V+V DLFF PAR FLKS+ E N + + + R+A++ Sbjct: 120 SRISIAGGQVVDVSPWPCPVGTQVKVSDLFFNTPARRKFLKSKVTEANHVYETVTRLALS 179 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P++SF+ + K +K N + ++ V+G D++ V++ + +I L G Sbjct: 180 RPEISFSLAHEKRQVFK---TPGNNRLEDTVAAVLGIDYLEKMVKVEKLEGDIGLWGLVS 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P F R N + +N R V+ + + AY + +P VL +++ P VDVN Sbjct: 237 RPDFTRSNRRDQILIVNQRVVRSPLLFRALDEAYRGLLLGKEFPAAVLFIQVPPNAVDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K+ ++F + I + + Q+++ A+ + + + S ++ +Y Sbjct: 297 VHPQKAEVKFADEKGIFDLVRQAVRLALTRHDLPR----GESCFGSGLSESKVAELGSRY 352 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 A TN + L ++ +D V Q + Y+ Sbjct: 353 AALSTNLVQMEHLLPPTDESDVFSFADKTQVLPSGYTV-------------LGQWLRTYV 399 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 I + L +VDQHAAHER+++++MR+ + T +Q L+ P + L + ++ + E Sbjct: 400 IVSAGEELWLVDQHAAHERVLYDRMRK--DQTPENTQPLVIPVSLSLPASKMEVLENNLE 457 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L G + G N++ IR +P+ +S + L R +++ +++ T E + Sbjct: 458 TLRGYGFNLDVLGYNSVVIRSVPSSVSGREAEALDR-VLEVLVEGRTEDG--SLGEKVWT 514 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC G+I++G + EM+RLL + + C HGRPTF L + ++EK R Sbjct: 515 ALACKGAIKAGTCLAPEEMSRLLTDWLSCDDYHHCPHGRPTFTVLTVKEVEKKLKR 570 >gi|258515357|ref|YP_003191579.1| DNA mismatch repair protein [Desulfotomaculum acetoxidans DSM 771] gi|257779062|gb|ACV62956.1| DNA mismatch repair protein MutL [Desulfotomaculum acetoxidans DSM 771] Length = 639 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 197/652 (30%), Positives = 303/652 (46%), Gaps = 74/652 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L E NQIAAGE++ERP+ +KEL+ENSLDA +S +E I GG + DNG Sbjct: 3 KIIILDELTANQIAAGEVVERPASVVKELVENSLDAGASAIEINIYEGGLKSITVIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E+ +A RH TSK+ ++D +NI+T GFRGEALPSI +++ + L +R + +G Sbjct: 63 GMSEEDAVLAFYRHATSKLASAEDLTNINTMGFRGEALPSIASIARVELKTRAQDSVSGI 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ISG K SV PGT V V DLF+ PARL +++ E I +++ R+A+A Sbjct: 123 RLEISGGKTLSVGSAGCPPGTSVTVSDLFYNTPARLKHMQTASAEAARINELVNRLAMAK 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF N + + +G+ + ++ V G + L E++ + + GYT Sbjct: 183 PEVSFRLRHNGRNVF---YAPGSGSLLDAVAAVYGIKIARELIPLEEENALLKIYGYTSR 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ NRGN Q +FIN R V+ IL I AY +P GRYP+ +L L I+P +VDVNV Sbjct: 240 PSVNRGNRKQQTLFINHRLVKSSIILRAIEEAYRTILPPGRYPLTILALAINPGKVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS------------------------- 334 HPAK +R I I +SI++A+ + Sbjct: 300 HPAKLEVRVEQENEIAELIKESIKRALQANSLIPELKITPAVKQKTLVGEPYQEKLNFTP 359 Query: 335 ----------------------SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ 372 VL +K ++S ++N + + T E ++ Sbjct: 360 DKIAEAKLRDNPTQENNSHYKRPVLEEKKLASEAKENLETGNRLVQVNNQTGRAESNNIR 419 Query: 373 ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 + + + + + AQ+ YI++ GL I+DQH Sbjct: 420 NPAAGQDQAQIIVRQNTTVSEKAPVNKKNSSFPSLWPLAQLMPTYILASADKGLFIIDQH 479 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AAHER++FEK ++ F+ ++ SQ LL P ++L E LI++H L +G E FG Sbjct: 480 AAHERILFEKYQKQFSEGQVVSQMLLIPITLELNFREEELIIKHIILLKEIGFIIEEFGK 539 Query: 493 NAIAIREIPAILSKKNIPQLLRDIID----------EIIDSSTTYTLQDRIENILATMAC 542 +R +P +S L DI+D ++ + Sbjct: 540 GTFLLRGVPGNVSPGQEKDLFFDILDFSEDSLTGREVLVQNMAAAMACKAAVK------- 592 Query: 543 YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +G K+ M LL ++ + + C HGRPT I L L ++ F R Sbjct: 593 -----AGEKLTPSAMLALLEQLAETESPYTCPHGRPTLIHLSLEELAVKFKR 639 >gi|78044214|ref|YP_360228.1| DNA mismatch repair protein HexB [Carboxydothermus hydrogenoformans Z-2901] gi|123756763|sp|Q3ACA6|MUTL_CARHZ RecName: Full=DNA mismatch repair protein mutL gi|77996329|gb|ABB15228.1| DNA mismatch repair protein HexB [Carboxydothermus hydrogenoformans Z-2901] Length = 578 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 185/595 (31%), Positives = 294/595 (49%), Gaps = 21/595 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L +++I +IAAGE++ERP +KEL+ENSLDA++ + I GG + D+G Sbjct: 3 KIKRLPDEVIKKIAAGEVVERPYSVVKELVENSLDAKAQNINVYIEEGGLGKIVVEDDGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+P A+ RH TSKI+ DD + +FGFRGEAL SI AVS +++ SR N G Sbjct: 63 GIPPEELPDALLRHTTSKIASFDDLYYLESFGFRGEALYSIAAVSKISIKSRVRGENNGY 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ++ ++ V M GT+V V DLFF PAR FLKS Q E LI I +MAI Y Sbjct: 123 ELIAHAGEVINLTEVGMAYGTVVTVSDLFFNTPARKKFLKSGQTEAGLIRQFIEKMAILY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F+ K+ + +++ G + N + + ++G + Sbjct: 183 PGVKFSLFIDGK---KIYSSAGIQEQLGLLARFWGLEKGNLLMLEEKLGEGFFIKGGIAL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + + +N R V+ + I AY +P G P+V L + + VDVNV Sbjct: 240 PPAGKPHRKLQVFAVNKRLVKSGILTKAIDDAYESLLPTGLKPLVFLEVVVPGTWVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K ++F + I + I+ + S+ S ++ ++ + +A Sbjct: 300 HPQKLEVKFMDEQKIYLDVRTIIRNKLVNAKSSSLKSFSPARETNTKSEDNDYWQVTYFA 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + +KL +E+ ST+D L T+S + D +E Q YII Sbjct: 360 EEFSGNSDKLLEKEDIFSTSDNL-----TFSLNKDFAKE------LNFQVIGQFSLKYII 408 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + D L+I+DQHAAHER+++EK + SQ L P I A + E+ ++ Sbjct: 409 VEKNDKLLIIDQHAAHERILYEKYQTKL--NPFYSQVLTFPVRIKASPELEAFLQENYQN 466 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 +G+ E FGP +REIP + NI +L + + EI++ + +++ + Sbjct: 467 FLEIGLHIEPFGPGEYLVREIPEDFPQNNIANVLEEYLYEIMEQKEQVSFREKALKLF-- 524 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC +++ G K+ EM L++E+ K C HGRPT +L L++I K F R Sbjct: 525 -ACKNAVKFGEKLTYSEMTNLVKELFKTNYPLSCPHGRPTIYELSLTEINKKFFR 578 >gi|225873493|ref|YP_002754952.1| DNA mismatch repair protein MutL [Acidobacterium capsulatum ATCC 51196] gi|254766152|sp|C1F876|MUTL_ACIC5 RecName: Full=DNA mismatch repair protein mutL gi|225794076|gb|ACO34166.1| DNA mismatch repair protein MutL [Acidobacterium capsulatum ATCC 51196] Length = 665 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 190/667 (28%), Positives = 322/667 (48%), Gaps = 79/667 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR LS+++ NQIAAGE+++RP+ +KEL+EN++DAE++R+ + GG+ ++TDNG Sbjct: 3 RIRVLSDQVANQIAAGEVVDRPASVVKELLENAIDAEATRIRVEVEAGGRKLIRVTDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A +RH TSKI SDD I T GFRGEALPSI ++S L +++R TG Sbjct: 63 GMMRDDAMLAFERHATSKIRSSDDLLTIATLGFRGEALPSIASISRLEMITRAQGEETGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I I+G K+ V PGT +RDLF+ PAR FLK+E E + ++ ++ A+A+ Sbjct: 123 CIEIAGGKMLRVEDAGAPPGTSFTIRDLFYNTPARRKFLKAESTELSHVSALVTHYALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN---------- 229 P F S + + ER+ Q+ G + +N + + + Sbjct: 183 PDKHFEL---HSATHALLNAPPVNEPSERVFQIFGAETLNQLIPMAAERPFDRAGLPEPP 239 Query: 230 --------------EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + ++G+ P + N N Y+FIN R V+D+ IL I Y Sbjct: 240 PWRRDQDYEPPDPGFLRVKGFISKPALQKLNRNSIYIFINRRLVRDRLILHAITEGYRNI 299 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS 335 IP +PV +L LE+ P +VDVNVHPAK+ +RFR +++ +F+ SI+ A+ K ++ Sbjct: 300 IPPTSFPVALLFLEMPPHEVDVNVHPAKTEVRFRQSSVLHDFLRDSIRNALMK--ARPAA 357 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATS---------------------LTNTQEKLFLQEN 374 + +S + T P + L + ++ L Sbjct: 358 DFLAALSASEPVSSVLPTATPVQDSEVIPAGSEAAGEVAAFALTEPVLPSVEQPLPFARA 417 Query: 375 RLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA------------------------- 409 ++ + + + P A G Sbjct: 418 EMTVPQVQGAAGSAPAPPAYPAVAGAAARVPGGNCGHDAGPEEIPPPGGEAGTLASLASL 477 Query: 410 --CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 Q+ +++I++ +G I+DQH AHER++FEK+ ++ ++ Q LL P ++DLL Sbjct: 478 KPLGQLRESFILAVNDEGFWIIDQHVAHERVLFEKILREREVERVHRQRLLMPLLLDLLP 537 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 + E ++L R G +AE FGP+ IAI+ P L + ++L +++++ + + Sbjct: 538 HQMVRFAEIAQELERNGFEAEPFGPHTIAIKASPVGLEGARLERMLVEVLEQTGTGTQSE 597 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 L+ I A++AC+ +I+ + M LL E+ + + + C HGRP ++ D Sbjct: 598 NLETVRTRIAASIACHSAIKINTPLDPQRMEWLLAELARTAHPTSCPHGRPIALRYSWKD 657 Query: 588 IEKLFGR 594 I++ F R Sbjct: 658 IQRAFER 664 >gi|291459238|ref|ZP_06598628.1| DNA mismatch repair protein MutL [Oribacterium sp. oral taxon 078 str. F0262] gi|291418492|gb|EFE92211.1| DNA mismatch repair protein MutL [Oribacterium sp. oral taxon 078 str. F0262] Length = 675 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 180/650 (27%), Positives = 295/650 (45%), Gaps = 61/650 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR LSE+ INQIAAGE+IERPS KEL+EN++DA +S V I GG S ++TDNG Sbjct: 28 KIRILSEETINQIAAGEVIERPSSIAKELLENAVDAGASAVSVEIRDGGISLLRVTDNGS 87 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ A RH TSKI D D I T GFRGEAL SI AVS L+++ P + + Sbjct: 88 GIAKGEVRTAFLRHATSKIRDASDLGRIRTLGFRGEALASIAAVSKTELITKTPDSLLAS 147 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G S+ + GT V VR+LF+ +PAR FLKS + E + +++ R AIA+ Sbjct: 148 RYEIEGGVERSLSEIGAMDGTTVLVRELFYNVPARRKFLKSRKTEGARVQEIVEREAIAH 207 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS--------NEI 231 P ++F + R+ G + + V G + + L+ + Sbjct: 208 PDIAFRYLQDGKQRFV---SFGKGAPLDAVYAVYGRELRGQLIPLSGSYLPSKETGRPAL 264 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 + G+ G P+ NR N + F+N R V+ + + + ++P V++LE+D Sbjct: 265 RISGFVGKPSTNRSNRSCELFFVNCRHVRSPLLTRALEDGCRAFLMQHKFPFAVVMLELD 324 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH-QDNA 350 P VDVNVHP K +RF + I + +I++A+++ + K+ A Sbjct: 325 PAIVDVNVHPQKLEVRFSDGEGIYTAVFDAIERALHETEMIADGEPPKREDPEERGPSPA 384 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG--- 407 P+ + + + +E+ + + E+ + Q Sbjct: 385 PEPFERRRLEMTPSFSQGERGEESSSAPFKEKEGYRRAEDFVPGNIRENPSFSEQREQRE 444 Query: 408 -------------------------------------------IACAQIHQNYIISQTTD 424 Q+ Y + + D Sbjct: 445 EEEGEGEREGENAEEKSRSEALSGKQESLFSERFLSEKARTEQRIIGQLFDTYWLIEYGD 504 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 L ++DQHAAHE++ FE++ + F K SQ L P ++ L E ++ + LG Sbjct: 505 KLFLIDQHAAHEKVNFERLMKRFREKKALSQYLSPPIVLTLSSREELILQRYLSYFRELG 564 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 + G ++ +PA L + +LL +++DE+ + S +T + + I A+M+C Sbjct: 565 YEISELGGRDYSVSAVPADLPRIGKKELLLELLDELCEESGRHTAESIYDRI-ASMSCKA 623 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ ++ EM+ LL E+ N C HGRPT + + ++IE+ F R Sbjct: 624 AVKGNMRLSFREMDALLSELMSLENPYACPHGRPTIVSISKTEIERKFKR 673 >gi|255655929|ref|ZP_05401338.1| DNA mismatch repair protein [Clostridium difficile QCD-23m63] gi|296450649|ref|ZP_06892402.1| DNA mismatch repair protein HexB [Clostridium difficile NAP08] gi|296879234|ref|ZP_06903229.1| DNA mismatch repair protein HexB [Clostridium difficile NAP07] gi|296260493|gb|EFH07335.1| DNA mismatch repair protein HexB [Clostridium difficile NAP08] gi|296429777|gb|EFH15629.1| DNA mismatch repair protein HexB [Clostridium difficile NAP07] Length = 654 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 182/658 (27%), Positives = 296/658 (44%), Gaps = 70/658 (10%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 MK I L + IN+IAAGE++ERPS +KELIENS+DA ++++ I GGKS +ITD Sbjct: 1 MKNIINILDDLTINKIAAGEVVERPSSVVKELIENSIDAGANKISIDIIDGGKSLIKITD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG G+ S E+ + RH TSKI DD ++++ GFRGEAL SI AVS L + ++ Sbjct: 61 NGMGIPSSEVEKSFLRHATSKIKKIDDLYDLYSLGFRGEALASISAVSKLEMTTKTKDEI 120 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G +I + G KI S P+ GT + +RD+FF PAR FLKS ET I+D+I ++A Sbjct: 121 IGTKIYVEGGKIISKEPIGSTNGTTIIIRDIFFNTPARQKFLKSTHAETINISDLINKLA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 I P + F ++ +G I + G++ N +++ K N + GY Sbjct: 181 IGNPNIQFKYTNNNKQMLN---TPGDGKLVNTIRSIYGKEITENIIDVEFKCNHFKMNGY 237 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 G R N N +++IN R V+ K I+ I +Y IP+G++ V L +E+DP +D Sbjct: 238 IGNNNIYRSNKNLQHIYINKRFVKSKIIIDAITESYKSIIPIGKHAVCFLNIEVDPSCID 297 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VN+HP K I+F + + ++ + + + + Sbjct: 298 VNIHPNKLEIKFEKEQEVYIELRDFLKVKLIHSNLIGKYATYSDKKTQPRIAINSREKST 357 Query: 357 KYA-----------------------------------TSLTNTQEKLFLQENRLSTNDL 381 Y + E L E+ ++ + Sbjct: 358 DYKLRNDNLLESTPKNSNTTKSKDEVIEVVTLSSEKPINEFQSVSEVLNASEDEVNNINY 417 Query: 382 LPSDDPTYSEDNDP----------------VEESEATHYQLGIACAQIHQNYIISQTTDG 425 L D + + +++SE + ++ +I + Sbjct: 418 LSEDSANDNIQEEFQVDGIRNEGNYYLGDSIKDSEEEYLCSSKRKFSLYGYSVIGVVFNT 477 Query: 426 LVIV----DQHAAHERLIFEKMRQDFNSTK-----ITSQTLLTPEIIDLLEGECALIMEH 476 +I+ + + E++ + K I Q LL P II++ + I + Sbjct: 478 YIILSKNDSMYLLDQHAAHERILYERYMEKFYRQDINMQILLDPVIIEVSNVDMLQIENN 537 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E + G + E FG N I +R +P I + + IID I + ++ Y L+ Sbjct: 538 LELFMKFGFELEIFGNNHIMVRCVPTIFGVPETEKFILQIIDNIEEITSNYDLKGER--- 594 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 A+MAC +I++ K+ IE+ LL ++EK N C HGRP +++ ++IEK+F R Sbjct: 595 FASMACRSAIKANDKIYDIEIKSLLEQLEKCENPFTCPHGRPIMVEISKTEIEKMFKR 652 >gi|268323523|emb|CBH37111.1| DNA mismatch repair protein [uncultured archaeon] Length = 573 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 181/602 (30%), Positives = 296/602 (49%), Gaps = 38/602 (6%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 MK I L E+ I QIAAGE+++RP+ +KELIENS+DA S+ + + GG + +ITD+ Sbjct: 1 MKSIFVLEERAIGQIAAGEVVDRPASVVKELIENSIDAGSTHIVVGVGNGGSDYIRITDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ E+ +A ++H TSKI +D ++HT GFRGEALPSI AVS + L +R + Sbjct: 61 GSGICEEDTEVAFEKHATSKIKGIEDLVSLHTLGFRGEALPSIAAVSRIELSTRHRSEDF 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G+ + + G + R + GT +EV+ LF+ +PAR+ +KS+ E I DV A+ Sbjct: 121 GSFLNLEGGVLKGRRRTTRSVGTTLEVKSLFYNLPARIGTIKSKSTELRHIVDVCINYAV 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS----NEITL 233 P + F N NG + I G N+ +EL E + + Sbjct: 181 INPAIKFELFHDDKNIISTL---GNGKMLDAIVNTYGSGVANDLIELKEPDSSTSFNVRI 237 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 GY P + G + ++N R V+++ + I+ Y +P YP VL L IDP Sbjct: 238 NGYISKPAASYGTKKHLFTYVNNRFVRNELVERAIKRGYMSLLPKYAYPFAVLALSIDPG 297 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 +++VN+HP K IRF + + +FI ++ + + + V +K + Sbjct: 298 EINVNIHPKKHEIRFYHSDDVFHFIAGAVSTTLRQADLIPEVVEREKDAVAAL------- 350 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 S T QEK + S + + +D E + Q+ Sbjct: 351 ------DSFTLPQEKKAPVSAQTSFHADMDAD-----------VPDEGRLDICSVPLYQV 393 Query: 414 HQNYIISQTT-DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +YII+Q+ D ++++DQHAA ER FE++ + + +I QTLL P + +L + Sbjct: 394 LDSYIIAQSEADDVIMIDQHAAAERANFERLIERY-GHRIDKQTLLRPYMPELSPHQFYR 452 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 I E++E L +G ER G ++ IR IP + + +++ +++ + ++R Sbjct: 453 IRENEEALRDMGFDIERLGDDSYIIRAIPVVFHGMIGEDEITEVMVRLVE--ESGKREER 510 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 I+ + +T AC SI++G K+ M ++ + C HGRPT I+L +IEK F Sbjct: 511 IKVLFSTAACKASIKAGEKLSYDSMRAIVAGLRNAKIPFTCPHGRPTMIRLTKKEIEKRF 570 Query: 593 GR 594 R Sbjct: 571 KR 572 >gi|260171998|ref|ZP_05758410.1| DNA mismatch repair protein mutL [Bacteroides sp. D2] gi|315920311|ref|ZP_07916551.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313694186|gb|EFS31021.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 633 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 162/634 (25%), Positives = 293/634 (46%), Gaps = 48/634 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DA++ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIREAADLFALRTMGFRGEALASIAAVAQVELKTRPESEELGTK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G ++ S ++ + G+ V++LFF +PAR FLK+ E + I R+A+ +P Sbjct: 125 LVIAGSQVESQEAISCSKGSNFSVKNLFFNVPARRKFLKANSTELSNILAEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + S + + +RI + G+ + ++ + + + GY P Sbjct: 185 EVAFSLYSNDSELFNLPV----SQLRQRILAIFGKKLNQQLLNIDVNTTMVKISGYVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + IP G + ++DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMEAYEQLIPAGEQISYFIYFDVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + S+++++ K S I +F + + + Sbjct: 301 PTKTEIKFENEQAIWQILSASVKESLGKFSAIPSIDFDTEDMPDIPAFEEKISSEPPKVH 360 Query: 358 YATSLTN------------------TQEKLF------LQENRLSTNDLLPSDDPTYSEDN 393 Y T E L+ + N + +D + + Sbjct: 361 YNTDYNPFKVSAGGGGSGSYSRSKVEWEDLYGGLTKASKMNNPQPEPEMDWEDSSIGGEP 420 Query: 394 DPVEE--------------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 VEE + + G Q +I++ GL+++DQH AH R++ Sbjct: 421 AFVEEKIETVTSAASSTLYANEPVMEKGNQHLQFKGRFILTSVKSGLMLIDQHRAHIRVL 480 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 F++ + SQ +L PEI+ L E A++ +DL +G G + AI Sbjct: 481 FDRYMVQIQQKQGVSQGVLFPEILQLPASEAAVLQSIMDDLSAVGFDLSNLGGGSYAING 540 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 IP+ + N +L+R+++ ++ ++ + T+A +I G+ + + EM Sbjct: 541 IPSGIEGLNPVELVRNMLHTAMEKGN-DVKEEIQNILAITLARAAAIVYGQVLSNEEMVS 599 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 L+ + P+ + G+ +K DIE+LF Sbjct: 600 LVDNLFACPSPNYTPDGKTVLTTIKEEDIERLFK 633 >gi|288800861|ref|ZP_06406318.1| DNA mismatch repair protein MutL [Prevotella sp. oral taxon 299 str. F0039] gi|288332322|gb|EFC70803.1| DNA mismatch repair protein MutL [Prevotella sp. oral taxon 299 str. F0039] Length = 604 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 171/604 (28%), Positives = 289/604 (47%), Gaps = 17/604 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ IKEL+ENS+DAE++ + ++ G++ Q+ D+G G Sbjct: 5 IQLLPDTVANQIAAGEVIQRPASVIKELVENSIDAEATTINVLVVDAGRTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI DD +HT GFRGEAL SI AVS + L +R + G Sbjct: 65 MSDTDARLSFERHATSKIRSADDLFQLHTMGFRGEALASIAAVSQVQLKTRQKHEDLGTV 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++G K S P GT + +LF+ +PAR FLKS E N I +R+A+ YP Sbjct: 125 IHVAGSKYISQEPCTCAVGTNFLIENLFYNVPARRKFLKSNTTELNNIVTAFQRIALVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++FT + + + G +RI + G+ + + L ++ + G+ G P Sbjct: 185 HITFTLHSNGNELISLRA----GTLRQRIVDIFGKRINQDLLSLETETTFCKIYGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + Q Y F+NGR ++ + + +A +P G + ++ ++DVN+H Sbjct: 241 ESAKKKGAQQYFFVNGRYMKHAYFHKAVASALERLVPTGEQVPYFIYFDVPTEEIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS---KKMISSFHQDNAPKTHLPK 357 P K+ I+F N I ++ +++A+ S + I F + + Sbjct: 301 PTKTEIKFENEKAIWQILMAIVREAVGLYNDVPSIDFDNEGRPDIPVFDPNASISVPKVD 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDL--------LPSDDPTYSEDNDPVEESEATHYQLGIA 409 Y + +E R TN + ++P+ ESE+ + + Sbjct: 361 YNPNYNPFKEVEQSTPRRDVTNWETLYEGLGNEIDEPQNLFTPDEPISESESLIAEKSPS 420 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q YI++ GL+I+DQH AH R+++E + N +SQ +L PE++ + Sbjct: 421 HYQYKGKYIMTSVKSGLMIIDQHRAHLRILYENFIEKLNQRVNSSQKVLFPEMVQIPAAS 480 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 L + ++ R+G + G + A++ +PA L N+ L+ D+ID L Sbjct: 481 IELFNKIIPEIERIGFEISNLGGGSYALQSVPADLQGLNMVDLIHDMIDNASVQGVNSAL 540 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 D + TMA +I G+ + ++EM+ L+ + N S G+ L SDI Sbjct: 541 DDIHHALALTMARSAAIPYGQVLSNVEMDDLITSLFATTNISYTPTGKIILSILNQSDIS 600 Query: 590 KLFG 593 KLFG Sbjct: 601 KLFG 604 >gi|212690539|ref|ZP_03298667.1| hypothetical protein BACDOR_00021 [Bacteroides dorei DSM 17855] gi|237725277|ref|ZP_04555758.1| DNA mismatch repair protein mutL [Bacteroides sp. D4] gi|212666888|gb|EEB27460.1| hypothetical protein BACDOR_00021 [Bacteroides dorei DSM 17855] gi|229436543|gb|EEO46620.1| DNA mismatch repair protein mutL [Bacteroides dorei 5_1_36/D4] Length = 622 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 168/624 (26%), Positives = 294/624 (47%), Gaps = 39/624 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + NQIAAGE+I+RP+ IKEL+EN++DA + V+ ++ GK+ Q+ D+G G Sbjct: 5 IRLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGAQHVDVLVVDAGKTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D +HT GFRGEAL SI AV+ + L +R G Sbjct: 65 MSETDARLSFERHATSKIREAADLFALHTMGFRGEALASIAAVAQVELRTRMEGEELGTM 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ISG K+ V+ G+ V++LFF +PAR FLKS Q E + I R+ + P Sbjct: 125 LTISGSKVEGQEAVSCPKGSSFCVKNLFFNVPARRKFLKSNQTELSNILTEFERIVLVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +VSFT + + + +RI V G+ + L+ + + + G+ G P Sbjct: 185 EVSFTLHHNGAELFNLPAL----QLRQRIMGVFGKKINQELLSLDVDTTMVRVSGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + Y F+NGR ++ + I AY + +P+G + E++P +DVN+H Sbjct: 241 ETARKKGARQYFFVNGRYMRHPYFHKAIMDAYEQLVPVGEQVSYFIYFEVNPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS------------------KKMI 342 P K+ I+F N I + ++++ + K S + Sbjct: 301 PTKTEIKFENEQAIWQILAAAVKETLGKFNAVPSIDFDTEGMPDIPAFDASPYTGIQPPK 360 Query: 343 SSFHQDNAP---KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 ++++ D P P + + E+L+ R +++ D+ Y + E Sbjct: 361 TTYNPDYNPFNVSAAPPSSYSKPSKDWEQLYAGLERHASSQNFHPDENDYRAEETSPAEE 420 Query: 400 EATHYQL---------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 Y Q +I++ GL+I+DQ AH R++++K + Sbjct: 421 NPGLYDHVEDSSVSEKSGQHYQFKGRFILTSVKSGLMIIDQQRAHIRILYDKYIDQISRR 480 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 + SQ +L P+I+ E A++ E EDL LG + G + AI +PA + N Sbjct: 481 QGISQGMLFPDIVQFPLSEVAILQEIMEDLSFLGFELTDLGGGSYAINGVPAGIEGLNPI 540 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILA-TMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+++++ ++ +++ +++ILA T+A +I G+ + + EM L+ + Sbjct: 541 DLIQNMVHTAMEKGG--KVKEEVQSILALTLAKATAIVPGQVLTNEEMTGLVDGLFAVAT 598 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFG 593 + G+ + D+EKLF Sbjct: 599 PNYTPDGKTVLSVINEDDLEKLFK 622 >gi|147669646|ref|YP_001214464.1| DNA mismatch repair protein MutL [Dehalococcoides sp. BAV1] gi|146270594|gb|ABQ17586.1| DNA mismatch repair protein MutL [Dehalococcoides sp. BAV1] Length = 566 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 183/599 (30%), Positives = 318/599 (53%), Gaps = 39/599 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + I +IAAGE+IERP+ +KEL+ENSLDAE+ RV+ VI GG + +++D+G Sbjct: 1 MPIKLLDKATIARIAAGEVIERPASVVKELLENSLDAEAKRVDIVIREGGIGYIEVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+TS E+ +A +RH TSK+S +D I + GFRGEALPSI AV+ L +++ +G Sbjct: 61 CGITSSEVLLAFERHATSKLSSFEDIYAIASLGFRGEALPSIAAVADLEMLTAVRTEESG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++SG ++ +A GT +++ LF +PARL FLK+ Q E + +T+V+ A+A Sbjct: 121 TYLSLSGGEMLKHTRMARAAGTSIKLSRLFSRVPARLKFLKTPQHEASKVTEVVVSYALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE---ITLQG 235 YP+V F+ + N NG + + +V G D + ++L + I + G Sbjct: 181 YPEVKFSLNVDGRNTLN---TPGNGKLRDAVLEVYGSDAASKMLDLENDTYRSSAINISG 237 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 P +R N N + F+N R +Q + + + AY+ + GRYP+ V+ + + V Sbjct: 238 LVSPPEVSRSNRNSLHFFVNRRLIQSRALQRAVEQAYSGLLTAGRYPMGVINIRLSGALV 297 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVN+HP K+ ++F + + + + ++++ + + H + A + Sbjct: 298 DVNIHPTKAEVKFSDESAVFTSVQRAVRSVLVE------------KPPLLHVEEARPVYQ 345 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 P+ QE ++ + +L + S + ++ ++ + L Q+ Sbjct: 346 PE-----VGRQEHIWAEVQKLPNANT--------SYISPVIQSAKTSSLLLLRLVGQVGG 392 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 Y++++ DGL I+DQHAAHER+ +E++ + S + Q+LL P I++L + A+I + Sbjct: 393 LYLLAEGPDGLYIIDQHAAHERIRYEEIAAETCSAR-ACQSLLEPFILELNPVQEAMIEK 451 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 +L +G + E FG ++ IPA L LL ++ D D+ + E Sbjct: 452 CKSELELMGFEMEEFGRRVYRVKSIPAGLKAHQAKALLAELADNPKDAPA-----EIKER 506 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ MAC+ ++R+G+ + +EM LL ++EK C HGRPT +K+ S +EK F R Sbjct: 507 LIRLMACHTAVRAGQVLTEVEMRELLLKLEKTGIPGHCPHGRPTIVKIDFSQLEKDFKR 565 >gi|265754209|ref|ZP_06089398.1| DNA mismatch repair protein MutL [Bacteroides sp. 3_1_33FAA] gi|263234918|gb|EEZ20473.1| DNA mismatch repair protein MutL [Bacteroides sp. 3_1_33FAA] Length = 622 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 168/624 (26%), Positives = 294/624 (47%), Gaps = 39/624 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + NQIAAGE+I+RP+ IKEL+EN++DA + V+ ++ GK+ Q+ D+G G Sbjct: 5 IRLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGAQHVDVLVVDAGKTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D +HT GFRGEAL SI AV+ + L +R G Sbjct: 65 MSETDARLSFERHATSKIREAADLFALHTMGFRGEALASIAAVAQVELRTRMEGEELGTM 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ISG K+ V+ G+ V++LFF +PAR FLKS Q E + I R+ + P Sbjct: 125 LTISGSKVEGQEAVSCPEGSSFCVKNLFFNVPARRKFLKSNQTELSNILTEFERIVLVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +VSFT + + + +RI V G+ + L+ + + + G+ G P Sbjct: 185 EVSFTLHHNGAELFNLPAL----QLRQRIMGVFGKKINQELLSLDVDTTMVRVSGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + Y F+NGR ++ + I AY + +P+G + E++P +DVN+H Sbjct: 241 ETARKKGARQYFFVNGRYMRHPYFHKAIMDAYEQLVPVGEQVSYFIYFEVNPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS------------------KKMI 342 P K+ I+F N I + ++++ + K S + Sbjct: 301 PTKTEIKFENEQAIWQILAAAVKETLGKFNAVPSIDFDTEGMPDIPAFDASPYTGIQPPK 360 Query: 343 SSFHQDNAP---KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 ++++ D P P + + E+L+ R +++ D+ Y + E Sbjct: 361 TTYNPDYNPFNVSAAPPSSYSKPSKDWEQLYAGLERHASSQNFHPDENDYRAEETSPAEE 420 Query: 400 EATHYQL---------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 Y Q +I++ GL+I+DQ AH R++++K + Sbjct: 421 NPGLYDHVEDSSVSEKSGQHYQFKGRFILTSVKSGLMIIDQQRAHIRILYDKYIDQISRR 480 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 + SQ +L P+I+ E A++ E EDL LG + G + AI +PA + N Sbjct: 481 QGISQGMLFPDIVQFPLSEVAILQEIMEDLSFLGFELTDLGGGSYAINGVPAGIEGLNPI 540 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILA-TMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+++++ ++ +++ +++ILA T+A +I G+ + + EM L+ + Sbjct: 541 DLIQNMVHTAMEKGG--KVKEEVQSILALTLAKATAIVPGQVLTNEEMTGLVDGLFAVAT 598 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFG 593 + G+ + D+EKLF Sbjct: 599 PNYTPDGKTVLSVINEDDLEKLFK 622 >gi|288803871|ref|ZP_06409296.1| DNA mismatch repair protein MutL [Prevotella melaninogenica D18] gi|288333636|gb|EFC72086.1| DNA mismatch repair protein MutL [Prevotella melaninogenica D18] Length = 630 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 166/630 (26%), Positives = 309/630 (49%), Gaps = 46/630 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ IKEL+EN++DA ++ ++ ++ G++ Q+ D+G G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGATHIDVLVVDAGRTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI DD ++ T GFRGEAL SI AV+ + L +R + G Sbjct: 65 MSETDARLSFERHATSKIRKADDLFSLRTMGFRGEALASIAAVAQIELKTRMESEDLGTH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++I+G + P + G+ V +LFF +PAR FLKS E N I R+ + YP Sbjct: 125 LSIAGSRFMGQEPCSCPVGSNFLVENLFFNVPARRKFLKSNTTELNNIITAFERIVLVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SFT + + + + S + +RI +V G+ + + ++ ++ + G+ G P Sbjct: 185 QISFTLHSNGTELFSLRACS----YRQRIVEVFGKRLNQDLLPIDVDTSLCHIHGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R A Y F+N R ++ + + TA+ IP G L ++ +DVN+H Sbjct: 241 ESARKKAPHQYFFVNDRYMKHPYFHKAVITAFDRLIPQGEQVPYFLYFDVPAENIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS---------------- 344 P K+ I+F N I ++ ++++A+ + + + Sbjct: 301 PTKTEIKFENEQAIWQILLAAVKEAVGRFNDIPAIDFDTEGKPDIPVFNPNVGMSAPKVD 360 Query: 345 FHQDNAPKTHLPKYA-TSLTNTQEKLFL--------QENRLSTNDLLPSDDPTYSEDNDP 395 F+ P + A S+ + E+L+ ++++L + S ND Sbjct: 361 FNPAYNPFKQTSQPAKPSVPDGWEELYADLGTGGEIRQSKLVEQREDEMISSSLSSVNDT 420 Query: 396 VEE------------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 VEE +E+ + Q YI++ GL+I+DQH AH R+++E+ Sbjct: 421 VEEGTIIPSAATQSAAESLIEDKAPSHYQYKGCYIMTAVKSGLMIIDQHRAHIRILYEEY 480 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + + K+ SQ +L PE++ + ++ + ++ +G + + G + A+ +PA Sbjct: 481 LRQLSEHKVHSQKVLFPEMVQFSVSDQVVLDQILPEMAEMGFQLDSLGGGSYAVNGVPAG 540 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA-TMACYGSIRSGRKMQSIEMNRLLR 562 + N+ L+ D++ ++S T+ ++ I+ LA ++A +I G+ + S+EM+ ++ Sbjct: 541 IEGLNVVALINDMVASAMESGTS--AKEEIDQALALSLARNAAIPQGQVLSSMEMDNIVN 598 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 E+ N + G P +K DIE LF Sbjct: 599 ELFACSNVNYTPSGEPVIAIMKQQDIEHLF 628 >gi|229824007|ref|ZP_04450076.1| hypothetical protein GCWU000282_01311 [Catonella morbi ATCC 51271] gi|229786361|gb|EEP22475.1| hypothetical protein GCWU000282_01311 [Catonella morbi ATCC 51271] Length = 657 Score = 468 bits (1205), Expect = e-129, Method: Composition-based stats. Identities = 168/649 (25%), Positives = 294/649 (45%), Gaps = 61/649 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+++ E + NQIAAGE++ERP+ +KEL+EN++DA + + + G ++ D+G Sbjct: 3 KIQQMPEALANQIAAGEVVERPASVVKELVENAIDAGAQTIRVELREAGIQQVKVIDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +E++ A H TSK+ D D I + GFRGEAL SIG+V+ + + S G Sbjct: 63 GMDAEDLAKAFLPHATSKLYDVHDLFQIKSLGFRGEALASIGSVAKVRVESMQAGAEAGH 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I I+G ++ + + GT + V LF+ PARL L S + E + I+ +A+AY Sbjct: 123 YIEIAGSQVQAQGMTSARKGTTLTVDSLFYNTPARLKHLSSLKTELKHSLNFIQDIAMAY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + F ++ G+ + I+ V + L ++ + ++GY Sbjct: 183 PDIRFHLVNDGQTIFQ---SFGTGDLRQTIANVYQPAMARQLIALEAENLDFKIKGYISP 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + + + INGR V+ + + AY + +GRYP+ V+ +E+DPR VDVNV Sbjct: 240 PQLTRTSKHYIHWMINGRAVRSYALTELLLRAYGRQLMIGRYPLAVIAIELDPRLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS-FHQDNAPKTHLP-- 356 HP K +R + + + Q++ +++ ++ + + S FHQ P Sbjct: 300 HPTKQTVRLSKESELGQLLTQAVVESLASLNPVPNAQVQELAGSRLFHQPEQVSPQGPAA 359 Query: 357 ------------------------------------------KYATSLTNTQEKLFLQEN 374 + A SL + +++ Sbjct: 360 NQVMPLDLDGKGKEPTFDSAYEEDDDLRTSQASQPAQSAPVSQVAESLAPDWQDRQVEQA 419 Query: 375 RLSTNDLLPSDDPTYSEDNDPVEESEAT---------HYQLGIACAQIHQNYIISQTTDG 425 +D P + + +E++A + QIH Y+I+++ +G Sbjct: 420 SKFEDDAPSQSQPIQATSEESNKETQAQPSGSQDLRPSFGHLRYVGQIHGTYLIAESPEG 479 Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 ++DQHAA ER+ +E + TK T QTLL P + E A + + L +LGI Sbjct: 480 FYLIDQHAAQERIRYEAFMKQKMDTK-TQQTLLLPYLFHFSPAELAGLDQVLPRLAQLGI 538 Query: 486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 E FGP + P L + Q +RD+ + ++ ++ E L +C G+ Sbjct: 539 VLEAFGPKTYQLASYPTWLEAHEVEQTVRDLTERLVKQPD-LSINQIKEAALIMQSCRGA 597 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 I++ + + + L++ ++ + C HGRP F+++ +EKLF R Sbjct: 598 IKANHYLDDSQASYLIQALDGLDDPFHCPHGRPVFVQITDKTLEKLFKR 646 >gi|282878154|ref|ZP_06286951.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella buccalis ATCC 35310] gi|281299732|gb|EFA92104.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella buccalis ATCC 35310] Length = 605 Score = 468 bits (1205), Expect = e-129, Method: Composition-based stats. Identities = 151/613 (24%), Positives = 292/613 (47%), Gaps = 31/613 (5%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 MK I+ L + + NQIAAGE+I+RP+ IKEL+EN++DA++ + ++ G++ Q+ D Sbjct: 1 MKDVIQLLPDIVANQIAAGEVIQRPASVIKELVENAVDADAKEINILVEDAGRTSIQVID 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 +G GM+ + ++ +RH TSKI DD + T GFRGEAL SI AV+ + L +R ++ Sbjct: 61 DGKGMSGTDARLSFERHATSKIRKADDLFALQTMGFRGEALASIAAVAQIELKTRREEDE 120 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G ++I+G K + P + G+ V +LF+ +PAR FLKS E N I R+A Sbjct: 121 LGTHLSIAGSKFTGQEPCSCPVGSNFMVANLFYNVPARRRFLKSNTTELNHIISAFERIA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + P+++FT + S + + G +RI + G+ + + L +++ L G+ Sbjct: 181 LVNPQLAFTLYSNGSELFNLRS----GGLKQRIVDIFGKRINQDLLPLGVETSMCKLSGF 236 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 G P ++ Y F+N R ++ + + A+ +P G + E+ + +D Sbjct: 237 VGKPESSKKKGAHQYFFVNNRYMRHPYFHKAVMNAFERLVPQGEQVPYFIYFEVKAQDID 296 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VN+HP K+ I+F N I + ++++A+ S + Sbjct: 297 VNIHPTKTEIKFENEQAIFQILFAAVREAVGLFNDVPSIEFDTQGQPDIPVYTPGNDGAV 356 Query: 344 ----SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 +++ P + + E+L+ ++ T + + E +D Sbjct: 357 VPKVNYNPQYNPFKGGESASKPSADHWEQLYDSISQPPTMPNVFDQNANNGEGSDDELVE 416 Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 + + Q YI++ GL+++DQH AH R+++E+ Q + K Q +L Sbjct: 417 DKSPIHY-----QYKGQYIMTAVKSGLMMIDQHRAHVRVLYERYLQQIKNQKAYPQKMLF 471 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 PE+I+ E + + +G + G + AI+ +P+ + + QL+ D++ Sbjct: 472 PELIEFSPSEAMNFAKLKPEFVAMGFEFTDMGNHDYAIQAVPSGIEGLDAVQLIHDMLVS 531 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 + ++ +++ + ++A ++ +G+ + + EM L+ + + N + G+ Sbjct: 532 AKEKDSS-AVEEVHRALALSLARSAALPTGQVLNNDEMENLVNSLFRCQNVNYTPDGKSI 590 Query: 580 FIKLKLSDIEKLF 592 L+ S+IE+LF Sbjct: 591 LHILQQSEIERLF 603 >gi|269123804|ref|YP_003306381.1| DNA mismatch repair protein MutL [Streptobacillus moniliformis DSM 12112] gi|268315130|gb|ACZ01504.1| DNA mismatch repair protein MutL [Streptobacillus moniliformis DSM 12112] Length = 606 Score = 468 bits (1204), Expect = e-129, Method: Composition-based stats. Identities = 183/612 (29%), Positives = 309/612 (50%), Gaps = 37/612 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + I N IAAGE++E P+ IKEL+ENSLDAE+S ++ + GG + +I+DNG G Sbjct: 10 IKILDDSISNIIAAGEVVENPASMIKELLENSLDAEASSIQIEVLNGGI-YVKISDNGKG 68 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ E++ ++++RH TSKIS +D N+ T+GFRGEAL SI AVS +++ S+ G Sbjct: 69 MSREDVILSIERHATSKISTKEDIFNLQTYGFRGEALASIAAVSKISISSKTKDEKIGTI 128 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + GT +E+RDLF+ PAR FL+ E E + I D++ + A+A P Sbjct: 129 VNAYAGVVRKYENFTRTTGTEIEIRDLFYNTPARKKFLRKESTEYSKIKDIVLKEALANP 188 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ T K +T I ++ G++ + N + GY G Sbjct: 189 NVAITLYIDGKATLK----TTGNGMENTIFELFGKNVLKNLEKFEY--------GYLGNV 236 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + Y ++NGR V+ + + AY + G+YP V+L+ +++P+++DVNVH Sbjct: 237 EILRSSKEYIYTYVNGRYVKSNLLDRAVIDAYYTKLMKGKYPFVILMYDVNPKEIDVNVH 296 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P+K I+F + I+ N I +SI + T + DN ++P Sbjct: 297 PSKKMIKFSDEKIVYNDIKRSIDNFFYEFDRRTWQPTLIPKTNEVVVDNTETEYIPINIF 356 Query: 361 SLTNTQEKL------FLQENRLSTNDLLPSDDPTYSEDNDPVE------------ESEAT 402 S +E++ F +E L + + + E+ + ++ E + Sbjct: 357 SKDEVKEEVIPETLTFKEEKDLEVREPKLIYENPFYEEEEEIKVENKVEYLKPFFEKKEG 416 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + QI YI+ + L I DQH HERL++E++ F I SQ LL PE+ Sbjct: 417 EVKYYEVLGQIFDTYILVNRDNNLEIYDQHIIHERLLYEELMSSFEKKNIGSQILLLPEL 476 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 ID+ + +I + + +LG + + N IA+R +P +++I +L +I+ +D Sbjct: 477 IDVSPVDKDIIFNNMDTFEKLGFEIDEISNNQIALRAVPNFNFRESIKNILENIL---VD 533 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 + + D E I+ +M+C G+I++G+K+ EM ++R + + C HGRP K Sbjct: 534 LKSKNKVGDIREKIIISMSCRGAIKAGQKLNMQEMQNMVRRLHEVGK-YTCPHGRPIISK 592 Query: 583 LKLSDIEKLFGR 594 + D++K+FGR Sbjct: 593 ISKYDLDKMFGR 604 >gi|320105858|ref|YP_004181448.1| DNA mismatch repair protein MutL [Terriglobus saanensis SP1PR4] gi|319924379|gb|ADV81454.1| DNA mismatch repair protein MutL [Terriglobus saanensis SP1PR4] Length = 655 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 187/652 (28%), Positives = 308/652 (47%), Gaps = 59/652 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR LS+++ NQIAAGE++ERP+ +KEL+EN++DA ++R+ + GG+ +I DNG Sbjct: 3 RIRVLSDQVANQIAAGEVVERPASVVKELLENAVDAGATRIRVDVEAGGRKLIRIEDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A +RH TSK+ S+D +I T GFRGEALPSI +V+ + + +R ++ G Sbjct: 63 GMVRDDAMLAFERHATSKLRNSEDLLSISTLGFRGEALPSIASVARVEMETRAAEDEVGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I ISG + V + GT + +RDLFF PAR F+KSE E + + ++ A+A+ Sbjct: 123 RIEISGGNMLRVEDIGRPVGTTLAIRDLFFNTPARKKFMKSESTELSHVAALVTHYALAH 182 Query: 180 PKVSFTFSTI----------KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN 229 P+ F T + ++ I V DF V Sbjct: 183 PEKHFELHTTTHALLVAPAVRDAGERLFQIFGAETHKAMIPAVAEVDFSRVGVPEPPPWK 242 Query: 230 -----------EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPL 278 + + G+ P + N N Y F+NGR V+DK IL + AY IP Sbjct: 243 RGEDYEAPAPGFLRVHGFVSKPELQKLNRNSMYFFVNGRQVRDKLILHAMGEAYRNVIPP 302 Query: 279 GRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS 338 +PVV+L LE+ P++VDVNVHPAK+ +RFR + +F+ +++ A+ K S ++ Sbjct: 303 TSFPVVLLFLEMPPQEVDVNVHPAKTEVRFRQSAFVHDFVRDTVRNAVMKARPVASFAMA 362 Query: 339 KKMISSFHQD-----NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL------------ 381 + + A ++ +L ++ Q R+ D Sbjct: 363 LETAPRASESLLLDVGAMSVGTVPWSEALPVNGDRQISQSERIRAGDAEEFSLREIQLPA 422 Query: 382 -------------------LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQT 422 L ++ Q+ +++I++ Sbjct: 423 MPVRLDFSASPAISPSIAGLNAEQVAEEMRAAEETPVTLNALANLRPLGQLKESFILAVN 482 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 +GL IVDQH AHER++FEK+ + + Q LL P +IDLL + A E+L R Sbjct: 483 EEGLWIVDQHVAHERVLFEKILKARQVEHVQRQRLLMPLLIDLLPEQMAAFAVMAEELER 542 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMAC 542 G +AE FGP +A++ P L +++ L +++ + R + A++AC Sbjct: 543 NGFEAEPFGPRTLAVKAAPVGLEGRHLELTLGEVLQVDERERQAENTEARRMRVAASIAC 602 Query: 543 YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +I+ ++ ++ LL E+ K N C HGRP ++ DI++ F R Sbjct: 603 HAAIKVNMPLEPEKIAWLLEELGKTENPMSCPHGRPIALRYSHKDIQRAFQR 654 >gi|325268739|ref|ZP_08135367.1| DNA mismatch repair protein MutL [Prevotella multiformis DSM 16608] gi|324988907|gb|EGC20862.1| DNA mismatch repair protein MutL [Prevotella multiformis DSM 16608] Length = 623 Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats. Identities = 166/627 (26%), Positives = 296/627 (47%), Gaps = 43/627 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ +KEL+EN++DA + + ++A G++ Q+ D+G G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELVENAIDAGAQHINVLVADAGRTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI DD ++HT GFRGEAL SI AV+ + L +R G Sbjct: 65 MSETDARLSFERHATSKIRKADDLFSLHTMGFRGEALASIAAVAQIELKTRMEAEELGTH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++I+G + + P + G+ V +LFF +PAR FLKS E N I R+ + P Sbjct: 125 LSIAGSRFTGQEPCSCPAGSNFLVENLFFNVPARRKFLKSNTTELNNIITAFERIVLVCP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++FT + + + + NF +RI +V G+ + + ++ ++ + G+ G P Sbjct: 185 QIAFTLHSNGTELFCLRSC----NFRQRIVEVFGKRLNQDLLPIDADTSLCRIHGFAGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R A Y F+NGR ++ + + TA+ IP G L E+ +DVN+H Sbjct: 241 ESARKKAPHQYFFVNGRYMKHPYFHKAVLTAFDRLIPQGEQVPYFLYFEVPAENIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL----------------------- 337 P K+ I+F N I ++ ++++A+ + + Sbjct: 301 PTKTEIKFENEQAIWQILLAAVKEAVGRFNDIPAIDFDTEGKPDIPVFNPTTGTTAPKID 360 Query: 338 SKKMISSFHQDNAPKTHL---------PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + F Q P P + Q +LF ++ + + Sbjct: 361 FNPAYNPFKQTARPARPASPKGWENLYPGLDSDAGPQQSQLFDRQEGETAGTGTDGETVV 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 S P ES Q YI++ GL+I+DQH AH R+++E + + Sbjct: 421 SSMATQPAMESMIEDKAPSHY--QYKGCYIMTAVKSGLMIIDQHRAHIRILYESYLRQLS 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 K SQ +L PE++ + + ++ +G + + G + A+ +PA + N Sbjct: 479 EHKPHSQKVLFPEMVQFAAADQLALDSILPEMREMGFQLDSLGGGSYAVNAVPAGIEGLN 538 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILA-TMACYGSIRSGRKMQSIEMNRLLREMEKN 567 + L+R+++ +DS T+ ++ I++ LA ++A +I G+ + + EM+ ++ E+ Sbjct: 539 VVALIREMVTAAVDSGTS--VKADIDHALALSLARNAAIPQGQVLGNAEMDNIVNELFAC 596 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N + G P +K DIE LF R Sbjct: 597 DNVNYTPSGEPVIAIMKQQDIEHLFDR 623 >gi|116754773|ref|YP_843891.1| DNA mismatch repair protein MutL [Methanosaeta thermophila PT] gi|121694200|sp|A0B977|MUTL_METTP RecName: Full=DNA mismatch repair protein mutL gi|116666224|gb|ABK15251.1| DNA mismatch repair protein MutL [Methanosaeta thermophila PT] Length = 557 Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats. Identities = 178/596 (29%), Positives = 293/596 (49%), Gaps = 45/596 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E+ +++IAAGE+IERP+ +KELIENS+DA +SR+ + GG S ++ D+G Sbjct: 3 RIHILDEETVSRIAAGEVIERPASVVKELIENSIDAGASRIIIEVENGGISLIKLVDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTG 118 G+ E++P+A QRH TSKIS DD + T GFRGEAL +I +VS + + +R + G Sbjct: 63 GIEREDLPLAFQRHATSKISTADDLFRLKTLGFRGEALSAIASVSKCVEVHTRTRYSPVG 122 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + +++ ++ GT +EVR LF TIPARL L S E I +++ +MAI Sbjct: 123 TYLRLENGRVAEIKDDGCPYGTSIEVRGLFETIPARLKHLSSPSQELARIAEIVTQMAII 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + ++SF S+ + ++ N T + + + G + + + + L G Sbjct: 183 HHRISFELSSGRRTLFRSNASETWDD---ALIRAFGLRTAKGMISIIAEGDGFDLHGMIS 239 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + + V++N R V K ++ +R AY + GR P+ V+ +EI+P VDVN Sbjct: 240 SHDSSHHGSELILVYVNSRPVYSKVVVQALREAYRGFLQSGRSPLAVISIEIEPSLVDVN 299 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK +RF + + + + A+ I + ++ + L Sbjct: 300 VHPAKREVRFLREDEVYDAVRDAALSALRSSAIPSPPPPARIA----------EPQLWSA 349 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 + T E R+S + Q YI Sbjct: 350 KPQIQRTLPLEVQAEQRISEPLI--------------------------RIVGQALDLYI 383 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 I + DG+++VDQHAA ER+ +E + + S I SQ L+ P ++L GE AL+ Sbjct: 384 IVEDDDGIMLVDQHAAAERIRYEHLLEKCKSGSI-SQELIQPVTVELSPGEVALLDSFSG 442 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 +L +G + + FG A ++R +PA + P+ +RD++ EI++ + L Sbjct: 443 ELGEIGFEIDPFGGRAYSVRSVPAA-AGLESPESIRDVLREILNLGRV-CRASFRDEALK 500 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC GSI+SG ++ M RLL ++ N C HGRP +++ +EK+FGR Sbjct: 501 HLACRGSIKSGERLSESAMLRLLTDLFACDNPRTCPHGRPVVVRISSESLEKMFGR 556 >gi|302345880|ref|YP_003814233.1| DNA mismatch repair protein MutL [Prevotella melaninogenica ATCC 25845] gi|302149101|gb|ADK95363.1| DNA mismatch repair protein MutL [Prevotella melaninogenica ATCC 25845] Length = 630 Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats. Identities = 164/630 (26%), Positives = 309/630 (49%), Gaps = 46/630 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ IKEL+EN++DA ++ ++ ++ G++ Q+ D+G G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGATHIDVLVVDAGRTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI DD ++ T GFRGEAL SI AV+ + L +R + G Sbjct: 65 MSETDARLSFERHATSKIRKADDLFSLRTMGFRGEALASIAAVAQIELKTRMESEDLGTH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++I+G + + P + G+ V +LFF +PAR FLKS E N I R+ + YP Sbjct: 125 LSIAGSRFTGQEPCSCPVGSNFLVENLFFNVPARRKFLKSNTTELNNIITAFERIVLVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SFT + + + + S + +RI +V G+ + + ++ ++ + G+ G P Sbjct: 185 QISFTLHSNGTELFNLRACS----YRQRIVEVFGKRLNQDLLPIDVDTSLCHIHGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R A Y F+N R ++ + + TA+ IP G L ++ +DVN+H Sbjct: 241 ESARKKAPHQYFFVNDRYMKHPYFHKAVITAFDRLIPQGEQVPYFLYFDVPAENIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS---------------- 344 P K+ I+F N I ++ ++++A+ + + + Sbjct: 301 PTKTEIKFENEQAIWQILLAAVKEAVGRFNDIPAIDFDTEGKPDIPVFNPNVGMSAPKVD 360 Query: 345 FHQDNAPKTHLPKYA-TSLTNTQEKLFL--------QENRLSTNDLLPSDDPTYSEDNDP 395 F+ P + A +S+ + E+L+ ++++L + +D Sbjct: 361 FNPAYNPFKQTSQPAKSSVPDGWEELYADLGSGGEIRQSKLFKQREDEMISSSLGTVSDT 420 Query: 396 VEE------------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 VEE +E+ + Q YI++ GL+I+DQH AH R+++E+ Sbjct: 421 VEEGTIIPSAATQSAAESLIEDKAPSHYQYKGCYIMTAVKSGLMIIDQHRAHIRILYEEY 480 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + K+ SQ +L PE++ + ++ + ++ +G + + G + A+ +PA Sbjct: 481 LHQLSEHKVHSQKVLFPEMVQFSVSDQVVLDQILPEMAEMGFQLDSLGGGSYAVNGVPAG 540 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA-TMACYGSIRSGRKMQSIEMNRLLR 562 + N+ L+ D++ ++S T+ ++ I+ LA ++A +I G+ + S+EM+ ++ Sbjct: 541 IEGLNVVALINDMVASAMESGTS--AKEEIDQALALSLARNAAIPQGQVLSSMEMDNIVN 598 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 E+ N + G P +K DIE LF Sbjct: 599 ELFACSNVNYTPSGEPVIAIMKQQDIEHLF 628 >gi|88607715|ref|YP_505509.1| DNA mismatch repair protein MutL [Anaplasma phagocytophilum HZ] gi|123722818|sp|Q2GJE2|MUTL_ANAPZ RecName: Full=DNA mismatch repair protein mutL gi|88598778|gb|ABD44248.1| DNA mismatch repair protein MutL [Anaplasma phagocytophilum HZ] Length = 634 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 205/634 (32%), Positives = 331/634 (52%), Gaps = 41/634 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I LS + IN+IAAGE+I+ P+ +KEL+ENS+DA + + + GG++ ++D+G Sbjct: 1 MPIVVLSAQTINKIAAGEVIDCPASVVKELVENSIDAGAKTINVHVDKGGRNLISVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+ A H TSK+ D D +N+ T GFRGE L ++ +V+ + ++S+ Sbjct: 61 CGIACEEMEKAFIGHATSKLIDGDLANVKTMGFRGEGLTAVASVARVKMVSKHVDAERAW 120 Query: 120 QIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I GEK + P ++ GT VEVRDLFF P RL FL++E+ E I D++ R+A+ Sbjct: 121 SITFEGGEKTRDLTPGVLSCGTHVEVRDLFFATPTRLKFLRTEKAEMQNIVDLLNRLAMI 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 ++F+ + ++ +K + Q + + + GE F ++E+N + + + G+ G Sbjct: 181 NYTIAFSLTIVERQIFKYSAQESLIERLKEMRA-FGEVFCEQSLEINHSIDHVRVYGHIG 239 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTFN+ + F+NGR + +L +++AY IP R+PVVVL L++ P VDVN Sbjct: 240 LPTFNKSKPGMVHTFVNGRPIYSTLLLGAVKSAYHGLIPKDRHPVVVLALDVMPAYVDVN 299 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL--------------SKKMISS 344 VHP+K +RF++ ++ ++ ++ +A++ + S +K Sbjct: 300 VHPSKMEVRFQDKRLVYKAVLDALGEALSSNVYARFSPAATTSEGHDHFAMDSIEKTYGK 359 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT-- 402 F ++ + + N L + + + + + Sbjct: 360 FFSEDTEAASTMQLQPEVLNHNIPLLFGSSHVDDSKGTHDTRFCADHTHHNDTKGSVHTK 419 Query: 403 ---------------------HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 LG A Q+ + YIIS+ D ++IVDQHAAHERL+ E Sbjct: 420 SFSARSSSSAESKMEQGCMLEEPPLGYAVCQLFERYIISRAGDYVIIVDQHAAHERLVCE 479 Query: 442 KMRQDFNSTKITSQTLLTPEIIDL-LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 +++ I Q LL PE I+L E E L+ E+ E L LG+ E G + +RE+ Sbjct: 480 YIKKVTEQEGIKRQVLLMPEFIELGNEYELELLTEYREKLRDLGLIVEPMGDLTVVVREV 539 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 PAI + L+ I++ I+ ++ ++ +I T+ACY SIRSGR M+ EMN L Sbjct: 540 PAIFGVVDAKALISKILESIMAKGDELFVKGKLSHICGTVACYSSIRSGRIMKLEEMNSL 599 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LR ME P+S QCNHGRPT++KLKLS+I+KLF R Sbjct: 600 LRHMESTPHSGQCNHGRPTYVKLKLSEIDKLFER 633 >gi|172087933|emb|CAQ35202.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] Length = 669 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 164/670 (24%), Positives = 303/670 (45%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 + +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 EIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQ------D 348 HP K +R + I+ IQ+A + + + L K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENR--------------LSTNDLLPSDDPTYSEDND 394 + + S + K F+ EN+ ++ D S N+ Sbjct: 359 RQNTENKQEKTFSSEESNSKPFMAENQNDEIVIKEDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIIS-----QTTDGLVIVDQH----------------- 432 E+ E + ++ Q + + Q + D + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSNDDTSVQNYENKASDDYYDVNDIKGTKSKDPKRRI 478 Query: 433 ---------------AAHERLIF--------EKMRQDFNSTKI-----TSQTLLTPEIID 464 A +E ++ E+++ ++ KI Q LL P Sbjct: 479 PYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEIQDLLIPLTFH 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + E +I ++ +L ++GI E FG + + P K + ++++D+I+ I++ Sbjct: 539 FSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEK 598 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 599 KVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|256841008|ref|ZP_05546515.1| DNA mismatch repair protein mutL [Parabacteroides sp. D13] gi|256736851|gb|EEU50178.1| DNA mismatch repair protein mutL [Parabacteroides sp. D13] Length = 621 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 176/615 (28%), Positives = 295/615 (47%), Gaps = 29/615 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RP+ +KEL+EN++DA +S ++ I GK+ Q+ D+G G Sbjct: 11 IHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKG 70 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKIS +D ++HT GFRGEAL SI AV+H+ L +R G Sbjct: 71 MSETDARMAFERHATSKISTAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGAELGTC 130 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++I+G + S+ P A N G+I V++LFF +PAR FLKS + E I + R+A+ P Sbjct: 131 LSIAGSNLESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFERIALVNP 190 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V + + + + +RI + G+ + L+ +S+ +T+ G+ G P Sbjct: 191 QVGMSLYHNDAEIFNLP----ESGLRQRIINIYGKSLNQKLLSLDAQSSMVTISGFVGRP 246 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + F+NGR ++ + I AY + IP G P + +DP +DVN+H Sbjct: 247 DSAKKRGALQFFFVNGRYMKHPYFHKAIMQAYEQLIPAGDMPNYFVYFTLDPSSIDVNIH 306 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K+ I+F N I ++ + ++A+ K + + N K P Sbjct: 307 PTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFDVEDAIDIPVYNPVKKSEPSTYK 366 Query: 357 --------KYATSLTNTQEKL----------FLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 Y T + +K F + + + +D E Sbjct: 367 APKVQVDSSYNPFDTTSYKKPEFDWSKLYQGFENDRVAAQLESESFEDAPIEELPAEASN 426 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 E ++ C Q YI++ GL I+DQH AH R++F++ + + SQ +L Sbjct: 427 PENLFTEVSNPCYQYKGRYIVTSLKSGLAIIDQHRAHVRILFDQYLSNIRQQQGVSQQVL 486 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 PEI++ E A++ EDL +G G + AI +PA + + L++DI+D Sbjct: 487 FPEIVEFTAAEAAVLPSLLEDLRFVGFDLSNLGNDNYAINGLPAGIENLDPVNLVKDIVD 546 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 I++ + E I ++A +IR G+ + EM+ L+ + P+S+ G+ Sbjct: 547 RAIETGC-EVHEKICEAIALSLAKAAAIRPGKSLSLEEMDHLIASLFSCPDSNLTPDGKT 605 Query: 579 TFIKLKLSDIEKLFG 593 L ++E+ F Sbjct: 606 IISMLTDEELERRFK 620 >gi|325109968|ref|YP_004271036.1| DNA mismatch repair protein mutL [Planctomyces brasiliensis DSM 5305] gi|324970236|gb|ADY61014.1| DNA mismatch repair protein mutL [Planctomyces brasiliensis DSM 5305] Length = 646 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 187/642 (29%), Positives = 320/642 (49%), Gaps = 53/642 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L+ ++N+IAAGE+IERP+ IKEL+ENSLDA +R++ + GG +I D+G Sbjct: 6 RIQVLTPAVVNKIAAGEVIERPASVIKELLENSLDALCNRIDVEVEDGGAELIRIVDDGE 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+AV H TSK+ DD + T GFRGEAL SI VS L SR + GA Sbjct: 66 GILPDDLPLAVTSHATSKLRQADDLFCVQTMGFRGEALASIAEVSQFRLRSRARGESIGA 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++A++ + S + P M GT +E+R LF P R FLK E I++ R+A+A Sbjct: 126 ELAVNCGQRSEIVPCGMAQGTQIEIRQLFCNTPVRRKFLKKAGTEFGYISEQFSRVALAV 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ + + N Y++ ER++ G + + + + + + L GY G Sbjct: 186 PRLQMSLTHNGKNVYRLPA---GQQLLERLTLFYGSSVTDKLIPIETQHHNVRLWGYVGH 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ ++G Y+F+NGR +QD+ +L + AY + +GR+PV L +E+ QVDVNV Sbjct: 243 PSLHKGTRKSQYLFLNGRYIQDRSLLHALNEAYRGLVMVGRHPVAFLFIEMPGDQVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQ----------------------KAINKKGISTSSVL 337 HP KS +RFR+ +++ ++ +++ + K L Sbjct: 303 HPTKSEVRFRDGSLLFRMLLSTLRTKFLQSDLQSTLSIKPAGNPAAPTLQNKQERVERDL 362 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL---------------- 381 A + P A S ++++ ++DL Sbjct: 363 VSWAKQQLEHQVAQRVTTPPDAPSPMPAAPSQPMEKSEAGSDDLGADAFLAAMENSGGNE 422 Query: 382 -----LPSDDPTYSEDNDPVEES----EATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 +P S +D S + + + GI Q+ YI+ T GL ++DQH Sbjct: 423 PTTVPFAEQEPVASTASDMQSASMPVPQPSEQRSGIPALQVDDCYIVLSTDQGLTVIDQH 482 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 A HER+++E+ R ++ Q LL P ++L + + AL+++ + L ++G + E FG Sbjct: 483 ALHERVLYERFRNKILEERVEVQKLLVPLTLELSDEQVALLLDQQQMLQQMGFQVEEFGR 542 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 +A+ P L + I ++R D++ SS T T +D ++ L MAC ++++G+K+ Sbjct: 543 GMLAVASHPVFLGHQVIEDVIRGFADKLG-SSETVTRRDLLDETLHMMACKAAVKAGQKL 601 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 E+ LL + + ++ C HGRPT + L ++++ FGR Sbjct: 602 TPDEIVSLLAQRDIVDDAHHCPHGRPTALVLSREELDRQFGR 643 >gi|323342237|ref|ZP_08082469.1| DNA mismatch repair protein MutL [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463349|gb|EFY08543.1| DNA mismatch repair protein MutL [Erysipelothrix rhusiopathiae ATCC 19414] Length = 585 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 177/597 (29%), Positives = 291/597 (48%), Gaps = 18/597 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L + N IAAGE++ERP+ IKEL+ENS+DA ++ +E I GG +++DNG Sbjct: 3 KIKVLDTHLTNMIAAGEVVERPAGIIKELVENSIDANATSIEVRIIEGGMGLIEVSDNGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ A +RH TSKI D + I +FGFRGEALPSI +VSH+ +S G Sbjct: 63 GMSGEDLSQAFERHSTSKIKSVLDLNAISSFGFRGEALPSIASVSHVEAIS--SDGVEGH 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I A N GT + V LF PARL +K+ ET+++ D I++ A+ Sbjct: 121 RIIIDNGVKKVKERAARNQGTTISVSSLFLKTPARLKHIKNVHYETSIVLDTIQKFAMGN 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PK++FT ++ + + +V G + + ++ + + G + Sbjct: 181 PKIAFTLYNESKVSFR---SYGRNDIADVFHRVYGAQVTQDTQLFSAENYDFKIDGIMAL 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P NR N +++IN R ++ I I Y +P RYP+VV+ + +DP+ VDVNV Sbjct: 238 PQHNRANRYSIWLYINNRMIRFPKIQKAIVDGYRRHMPTDRYPIVVMNIHVDPQLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP+K IR ++ I ++K + +F A +T + + Sbjct: 298 HPSKWEIRLSKDNVLVELIQDCFSSILDKN--------MRPQRVTFPSPVAVQTDIKEAL 349 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES--EATHYQLGIACAQIHQNY 417 + + ++E + D S+ E E+ + +Q+ Y Sbjct: 350 LGEPIPRFEPLIEEPKKIYVPDYIPDSLPISDFKPREVEPQIESGKIEPLTVLSQMSGCY 409 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 I++Q +GL I+DQHAA ER+ +E + + +Q L P II+ + + E + Sbjct: 410 ILAQGENGLYIIDQHAAMERVRYEYYQNKMLNQNNPTQDFLIPLIIEGRKPIIGRVHEIN 469 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 + L ++ E FG +A +R P + +K + + + +++D D T +D N+L Sbjct: 470 QILKEFQLELEVFGEDAFVLRSTPLWIEEKVVSEFIHEVLDMFEDERTIRE-EDLRRNVL 528 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AT+AC+ S+R M EM L+R++ C HGRPTFI ++ + K F R Sbjct: 529 ATLACHSSVRFNEYMSMDEMTELVRQLRACEQPFNCPHGRPTFITVEHKQLIKEFKR 585 >gi|149370649|ref|ZP_01890338.1| DNA mismatch repair protein [unidentified eubacterium SCB49] gi|149356200|gb|EDM44757.1| DNA mismatch repair protein [unidentified eubacterium SCB49] Length = 618 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 162/623 (26%), Positives = 296/623 (47%), Gaps = 41/623 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L + + NQIAAGE+++RP+ +KEL+EN++DA +S + VI GK+ Q+ D+G Sbjct: 4 RIQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGASTITLVIKDAGKTLIQVIDDGV 63 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + +A +RH TSKI ++D N+HT GFRGEAL SI A++H+ L ++ +++ G Sbjct: 64 GMNVTDARLAFERHATSKIKAAEDLFNLHTKGFRGEALASIAAIAHVELKTKTEEDDVGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI I G +++S V G+ + V++LF+ IPAR NFLKS VE I D R+A+A+ Sbjct: 124 QICIEGSEVTSQEIVVTPKGSTISVKNLFYNIPARRNFLKSNTVEIRHIIDEFHRVALAH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + FT S+ +K+ N +RI ++G V + E+++ + + G+ Sbjct: 184 PNLGFTMINNGSDVFKLPS----SNLRQRIVNIMGTKTNEKLVPVTEETDILKVNGFVIK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F++ + Y F+N R ++ ++ + AY + G P L L+++P+ +D+N+ Sbjct: 240 PEFSKKSRGDQYFFVNNRFIKSHYLHHAVTAAYEGLVKDGTQPGYFLFLDVNPQSIDINI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-----------------------SSV 336 HP K+ I+F + I + +I+ ++ + I+ ++ Sbjct: 300 HPTKTEIKFDDEHAIYAMLRATIKHSLGQFNIAPVLDFNKDNGFDTPYEYSKKVPKAPTI 359 Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFL---QENRLSTNDLLPSDDPTYSEDN 393 + + F ++ K Y E L+ E D + + + D Sbjct: 360 EVDRDFNPFKTESKQKNISFPYKREKEPAWEALYSGLKSEQTQIETDTIDTTQLQFESDP 419 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 + + Q+ YIIS GL+++ QH AH+R+++E++ ++ + Sbjct: 420 ENGRLFDENENDSTHGTFQLQNKYIISPIKSGLLVIHQHLAHQRVLYEELLKNITVQEAV 479 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 SQ LL P + E + E L G + + + + IP + + + Sbjct: 480 SQQLLFPLCLSFTPKEVKALNNVKEQLEHTGFVFSNWKDDEVEVSGIPVSVLESQATE-- 537 Query: 514 RDIIDEIIDSSTTYTLQDR---IENILA-TMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 I + + D + ++LA +MA ++++G M E L+ ++ Sbjct: 538 ---ILNQLLLDLQNEVPDASFSLNDLLAKSMAKSMAVKTGVAMHKGEQEHLVHQLFACKE 594 Query: 570 SSQCNHGRPTFIKLKLSDIEKLF 592 S RP I + ++D +K F Sbjct: 595 PSVSPDNRPVLITMDVNDFDKKF 617 >gi|241894949|ref|ZP_04782245.1| DNA mismatch repair protein MutL [Weissella paramesenteroides ATCC 33313] gi|241871667|gb|EER75418.1| DNA mismatch repair protein MutL [Weissella paramesenteroides ATCC 33313] Length = 680 Score = 465 bits (1196), Expect = e-128, Method: Composition-based stats. Identities = 169/660 (25%), Positives = 291/660 (44%), Gaps = 72/660 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +LSE + NQIAAGE+IERP +KEL+EN+LDA +++++ ++ G ++ DNG G Sbjct: 9 IHELSEILANQIAAGEVIERPGSVVKELVENALDAHATQIDVLVEEAGVKSIRVIDNGDG 68 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++ A RH TSKI+ D + + GFRGEALPSI +V+ + L + GA+ Sbjct: 69 IPGNQVARAFLRHATSKINSRQDLFRVQSLGFRGEALPSIASVADVVLQTATADAEQGAK 128 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G KI GT + V DLFF PARL +LKS+ E + I DVI R+A++YP Sbjct: 129 IHYQGGKIIEETGTNARQGTDITVSDLFFNTPARLKYLKSQATELSQIVDVINRLAMSYP 188 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+F ++ + NGN + I+ V G + ++ N+ + G+ +P Sbjct: 189 NVAFHLVHNGK---ELLQTAGNGNLQQVIASVYGVQQARKMLSVSAHDNDFEINGFISLP 245 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N + + INGR V++ + I Y + +GR+P+ +L +++DP VDVNVH Sbjct: 246 ELTRANRSYISILINGRFVKNYNLSKAIVKGYGSKLMVGRFPIAILQIKMDPLLVDVNVH 305 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST--------------------------- 333 P K +R T + + I + + + + + Sbjct: 306 PQKHEVRLSKETQLMSLIEEMVVQRFVNENLIPNAYENYMQGNHDSYVVPEHDNDQFMTQ 365 Query: 334 ----SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 S ++ S ++ + +P+ + Q + + + S D Sbjct: 366 LQEASVTFHQETGRSLQNISSDEIEIPEIPIANDPDLSTTQTQNDEVVPIVITKSQDLVK 425 Query: 390 SEDNDPV----------------------EESEATHYQLGIACAQIHQNYIISQTTDGLV 427 D V E S + + ++ + + Q + Sbjct: 426 KSVRDFVAKYTAETPSLPFTEAADPVAAEEVSLSFTNTDLVDDSRHDKPFPDLQYIGQMH 485 Query: 428 IVDQHA--------AHERLIFEKMRQDFNSTKI-----TSQTLLTPEIIDLLEGECALIM 474 A + E+++ ++ +I SQ LL P ++ + + I Sbjct: 486 GTFLFAQSPEGFYIVDQHAAQERIKYEYYREEIGKVGLESQKLLVPIVLTYPKIDILKIQ 545 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 H L ++G+ E FG +A+ +RE PA + K +R+++D ++ T +D E Sbjct: 546 AHASQLEQVGLNLESFGDDAVIVREHPAWIEKGQEEATIREMVDWLLRDGNITT-KDFRE 604 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C SI++ + E LL+++ + N C HGRP + +D+EK+F R Sbjct: 605 KTAIMMSCKRSIKANWALNDYEARGLLKQLAQAQNPYNCPHGRPVLVSFTNTDMEKMFKR 664 >gi|301312041|ref|ZP_07217963.1| DNA mismatch repair protein MutL [Bacteroides sp. 20_3] gi|300830143|gb|EFK60791.1| DNA mismatch repair protein MutL [Bacteroides sp. 20_3] Length = 615 Score = 465 bits (1196), Expect = e-128, Method: Composition-based stats. Identities = 177/615 (28%), Positives = 296/615 (48%), Gaps = 29/615 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RP+ +KEL+EN++DA +S ++ I GK+ Q+ D+G G Sbjct: 5 IHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKIS +D ++HT GFRGEAL SI AV+H+ L +R G Sbjct: 65 MSETDARMAFERHATSKISTAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGAELGTC 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++I+G + S+ P A N G+I V++LFF +PAR FLKS + E I + R+A+ P Sbjct: 125 LSIAGSNLESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFERIALVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V + + + + +RI + G+ + L+ +S+ +T+ G+ G P Sbjct: 185 QVGMSLYHNDAEIFNLP----ESGLRQRIINIYGKSLNQKLLSLDAQSSMVTISGFVGRP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + F+NGR ++ + I AY + IP G P + +DP +DVN+H Sbjct: 241 DSAKKRGALQFFFVNGRYMKHPYFHKAIMQAYEQLIPAGDMPNYFVYFTLDPSSIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K+ I+F N I ++ + ++A+ K + + N K P Sbjct: 301 PTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFDVEDAIDIPVYNPVKKSEPSTYK 360 Query: 357 --------KYATSLTNTQEKL----------FLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 Y T + +K F + + + +D E Sbjct: 361 APKVQVDSSYNPFDTTSYKKPEFDWSKLYQGFENDRVAAQLESESFEDAPIEELPAEASN 420 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 E ++ C Q YI++ GL I+DQH AH R++F++ + + SQ +L Sbjct: 421 PENLFTEVSNPCYQYKGRYIVTSLKSGLAIIDQHRAHVRILFDQYLSNIRQQQGVSQQVL 480 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 PEI++ E A++ EDL +G G + AI +PA + + L++DI+D Sbjct: 481 FPEIVEFTAAEAAVLPSLLEDLRFVGFDLSNLGNDNYAINGLPAGIENLDPVNLVKDIVD 540 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 I++ + E I ++A +IR G+ + S EM+ L+ + P+S+ G+ Sbjct: 541 RAIETGC-EVHEKICEAIALSLAKAAAIRPGKSLSSEEMDHLIASLFSCPDSNLTPDGKT 599 Query: 579 TFIKLKLSDIEKLFG 593 L ++E+ F Sbjct: 600 IISMLTDEELERRFK 614 >gi|330996057|ref|ZP_08319951.1| DNA mismatch repair protein [Paraprevotella xylaniphila YIT 11841] gi|329574054|gb|EGG55632.1| DNA mismatch repair protein [Paraprevotella xylaniphila YIT 11841] Length = 616 Score = 465 bits (1196), Expect = e-128, Method: Composition-based stats. Identities = 167/617 (27%), Positives = 287/617 (46%), Gaps = 31/617 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DA ++R++ V+ GK+ Q+ DNG G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAVDASATRIDVVVEDAGKTSIQVVDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI DD + T GFRGEAL SI AV+ + L +R + G Sbjct: 65 MSETDARLSFERHATSKIRKADDLFALRTMGFRGEALASIAAVAQVELRTRQAGSELGTC 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I G ++ PV+ PG+ +R+LFF +PAR FLKS Q E + I R+A+ + Sbjct: 125 VNIEGSQLVGQEPVSCAPGSNFLIRNLFFNVPARRKFLKSNQTELSNILQEFERVALVHE 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F+ + S + +RI + G+ + ++ +++ + L G+ G P Sbjct: 185 DIAFSLTQNGSVVLSLP----KSTLRQRIINIFGKKLNEQLLAVDVETSLVRLSGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + A+ + IP+G L E+DP +DVN+H Sbjct: 241 DSARKKGTHQYFFVNGRYMRHPYFHKAVMEAFEQLIPVGEQVSYFLYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ I+F N I I+ ++++++ + + + + A Sbjct: 301 PTKTEIKFENELAIWQIIVAAVKESLGRFNAVPTIDFDTEGAPDIPVFGNAFSPATVEAP 360 Query: 361 SLT-NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG------------ 407 L N F + +P Y V + G Sbjct: 361 VLEVNPDFNPFKSGSSSGYKSQRMDWEPLYEGVEQSVSSVVTNDFGGGDFSSSLPDDLTL 420 Query: 408 -----------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 Q YI++ GL+I+DQH AH R+++++ R+ + SQ Sbjct: 421 YADAKDTFEKSTQHYQYKGKYIMTAVKSGLMIIDQHRAHIRVLYDRYRKQMEGSNGQSQG 480 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 LL PE++ L E ++ +DLH LG G + +I IP+ N +++R I Sbjct: 481 LLFPEMLQLPPSEGIVLEHLTDDLHALGFDLSVLGGGSFSINAIPSGTEGLNPVEVVRGI 540 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 + I+ +D I ++A +I G+ + + EM L+ ++ N +Q G Sbjct: 541 VHSSIEKGC-NVEEDVRHYIALSLARSAAIVQGQVLSNEEMEALVDDLFVCRNPNQTPDG 599 Query: 577 RPTFIKLKLSDIEKLFG 593 + L+ D+++LFG Sbjct: 600 KVVVAILEQDDLDQLFG 616 >gi|262383881|ref|ZP_06077017.1| DNA mismatch repair protein MutL [Bacteroides sp. 2_1_33B] gi|262294779|gb|EEY82711.1| DNA mismatch repair protein MutL [Bacteroides sp. 2_1_33B] Length = 615 Score = 464 bits (1195), Expect = e-128, Method: Composition-based stats. Identities = 177/615 (28%), Positives = 297/615 (48%), Gaps = 29/615 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RP+ +KEL+EN++DA +S ++ I GK+ Q+ D+G G Sbjct: 5 IHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKIS +D ++HT GFRGEAL SI AV+H+ L +R G Sbjct: 65 MSETDARMAFERHATSKISTAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGTELGTC 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++I+G + S+ P A N G+I V++LFF +PAR FLKS + E I + R+A+ P Sbjct: 125 LSIAGSNLESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFERIALVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V + + + + +RI + G+ + L+ +S+ +T+ G+ G P Sbjct: 185 QVGMSLYHNDAEIFNLP----ESGLRQRIINIYGKSLNQKLLSLDAQSSMVTISGFVGRP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + F+NGR ++ + I AY + IP G P + +DP +DVN+H Sbjct: 241 DSAKKRGALQFFFVNGRYMKHPYFHKAIMQAYEQLIPAGDMPNYFVYFTLDPSSIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K+ I+F N I ++ + ++A+ K + + N K P Sbjct: 301 PTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFDVEDAIDIPVYNPVKKSEPSTYK 360 Query: 357 --------KYATSLTNTQEKL----------FLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 Y T + +K F + + + +D E Sbjct: 361 APKVQVDSSYNPFDTTSYKKPEFDWSKLYQGFENDRVAAQLESESFEDAPIEELPAEASN 420 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 E ++ C Q YI++ GL I+DQH AH R++F++ + + SQ +L Sbjct: 421 PENLFAEVSNPCYQYKGRYIVTSLKSGLAIIDQHRAHVRILFDQYLSNIRQQQGVSQQVL 480 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 PEI++ E A++ EDL +G G + AI +PA + + L++DI+D Sbjct: 481 FPEIVEFTAAEAAVLPSLLEDLRFVGFDLSNLGNDNYAINGLPAGIENLDPVNLVKDIVD 540 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 +I++ + E I ++A +IR G+ + S EM+ L+ + P+S+ G+ Sbjct: 541 RVIETGC-EVHEKICEAIALSLAKAAAIRPGKSLSSEEMDHLIASLFSCPDSNLTPDGKT 599 Query: 579 TFIKLKLSDIEKLFG 593 L ++E+ F Sbjct: 600 IISMLTDEELERRFK 614 >gi|307354003|ref|YP_003895054.1| DNA mismatch repair protein MutL [Methanoplanus petrolearius DSM 11571] gi|307157236|gb|ADN36616.1| DNA mismatch repair protein MutL [Methanoplanus petrolearius DSM 11571] Length = 618 Score = 464 bits (1195), Expect = e-128, Method: Composition-based stats. Identities = 191/611 (31%), Positives = 306/611 (50%), Gaps = 22/611 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVI--AGGGKSFFQITDN 59 KI LS IN+IAAGE+IERP+ +KEL+ENSLDAE++ ++ I G + +I+D+ Sbjct: 11 KIHILSNATINKIAAGEVIERPASVVKELVENSLDAEATSIKVEITSDNNGIAKIRISDD 70 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMS--RPPQN 115 G+GM ++ ++ RH TSKIS D I T GFRGEAL SI AVS +T+++ R + Sbjct: 71 GYGMDADSALISFSRHATSKISKISDLYEISTMGFRGEALASIAAVSKVTMITKQRTLEP 130 Query: 116 NTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 + G +I I G + PV+ GT + V LFF P R FLKS + E I V+ Sbjct: 131 SPGTKIVIEGGDVVEQSPVSAPDGTSIFVEKLFFNTPVRKKFLKSVKTEFTHIFRVVEEA 190 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 ++A +SF +G+ + I+ V G ++ + + + + G Sbjct: 191 SLANSGISFQLLHNGK---VSLSTGKSGSVLDTITYVYGTEYAKEMIPVKSLQTFMKVDG 247 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 + P+ + N+ + + +N R V ++ ++ AY +P RYPV L + ID + V Sbjct: 248 FCAPPSLDAPNSRKIIISVNNRPVYSLPLVQAVKRAYGTLLPRERYPVCFLNIRIDRKVV 307 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHPAK +RF I I+ S+++A++ + + S K I + Sbjct: 308 DVNVHPAKKEVRFSREKEITEEIVASVREALDSRNLLFSYGAGNKNIIRKVSVVDDTSQK 367 Query: 356 PKYATSLTNTQEKLFL------QENRLSTNDLLPSDDPTYSEDNDPVEESEATHY--QLG 407 P + S + + +ENR + S + + ESE Sbjct: 368 PLFCVSSEDPVYNPYSGRTNKIKENRSDHSLAEYSTTDSRLRSSADAAESEEDDRKLPYM 427 Query: 408 IACAQIHQNYIISQTT----DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 Q+ +YI++Q D +VI+DQHAAHER+++E M + ++ SQ LL P +I Sbjct: 428 KVIGQVDDSYIVTQMRGSDEDEMVIIDQHAAHERIMYE-MVCEKRNSGHISQELLVPSVI 486 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 E A + E+ + L G E FG + A+R +P IL KK + LRDI++++++ Sbjct: 487 PFKPSESAALSENLQLLEEEGFFLEEFGKDTYALRAVPVILGKKAGTETLRDIVNDLLEG 546 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 +L E I +T+AC +I++G + +M RL+ ++ + N C HGRPT I Sbjct: 547 GRAQSLDILKEKISSTIACKAAIKAGTSLSVEQMERLVDQLSRTKNPYSCPHGRPTMISF 606 Query: 584 KLSDIEKLFGR 594 S ++ +F R Sbjct: 607 SKSRLDSMFKR 617 >gi|42520375|ref|NP_966290.1| DNA mismatch repair protein MutL-2 [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410113|gb|AAS14224.1| DNA mismatch repair protein MutL-2 [Wolbachia endosymbiont of Drosophila melanogaster] Length = 598 Score = 464 bits (1195), Expect = e-128, Method: Composition-based stats. Identities = 221/610 (36%), Positives = 341/610 (55%), Gaps = 29/610 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L K IN+IAAGE+IERP+ +KEL+EN++DA SS +E I GG++ + D+G Sbjct: 1 MAIILLDTKTINRIAAGEVIERPASLVKELVENAIDAGSSEIEIKIESGGRNLITVIDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ +A+ RH TSK+SD + I GFRGEALPSI AVS + L S+ Sbjct: 61 NGIEKNDLELALMRHATSKLSDSELIEIRHLGFRGEALPSIAAVSRMKLSSKASGAKEAW 120 Query: 120 QIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I GEKI + P ++ GT +EVRDLFF P RL FLK+E+ ET I D++ +A+ Sbjct: 121 SIRYEGGEKIREITPCSLLQGTYIEVRDLFFATPNRLKFLKTERAETQSIVDIVNNLAMI 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + FT ++ K Q++ N I + +F +N++E+ E+ I L+G+ Sbjct: 181 NYSIGFTLTSGNKKLLKYVKQTSLFNRLCEIEE----EFQSNSLEVKEEEEGIKLKGHIC 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P NRGN+ Q Y F+NGR ++D ++ IR AY + IP RYP VL LE+ QVDVN Sbjct: 237 KPNVNRGNSTQIYTFVNGRPIKDNLLVGAIRYAYHDFIPNNRYPFAVLHLEVPYDQVDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI-----SSFHQDNAPKT 353 VHP KS +RF+N +I + + I K ++ + + + +++I S D+ K Sbjct: 297 VHPNKSEVRFQNKRLIYEIVRRGIIKTLSTRFAAGDQGIEEELIFNDSKSQEQVDSQEKK 356 Query: 354 HLPKYATSLTNTQEKLFLQ------ENRLSTNDLLPSDDPTYSEDNDPVEESEAT---HY 404 ++ + E ++ E R S + + + +E + + Sbjct: 357 DQKEFYEKRPSLLENRLMKEFNAPDERRQSLPETFKYGESLPQKGTMVLERKQIDLVEDH 416 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 LG A Q+H YII++ D L+IVDQHAA+ERLI+E ++ + I Q LL + Sbjct: 417 PLGYARCQVHNTYIIAEAGDRLIIVDQHAAYERLIYECLK---QKSSIKRQKLLPETVEI 473 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + ++ + ++L +G E + + I+EIPAIL +I ++L DI+D++++ Sbjct: 474 KNQAGMGMVKTYKDELFEMGFDIEIQSEDKVTIKEIPAILGTIDIKEMLVDIVDKLMEME 533 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 T ++D++ I AT+AC+G+ GRKM+ EMN +LR++EK P S H RPT+I++K Sbjct: 534 DTLPIEDKVNKISATIACHGA---GRKMKLEEMNEILRQIEKTPYSG---HERPTYIEMK 587 Query: 585 LSDIEKLFGR 594 L DIEKLF R Sbjct: 588 LIDIEKLFER 597 >gi|315607435|ref|ZP_07882431.1| DNA mismatch repair protein MutL [Prevotella buccae ATCC 33574] gi|315250867|gb|EFU30860.1| DNA mismatch repair protein MutL [Prevotella buccae ATCC 33574] Length = 621 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 166/620 (26%), Positives = 295/620 (47%), Gaps = 36/620 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ IKEL+ENS+DA ++ + ++ G++ Q+TDNG G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENSVDAGATVINVLVVDAGRTSIQVTDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI DD +HT GFRGEAL SI AV+ + L +R + G Q Sbjct: 65 MSDTDARLSFERHATSKIRQADDLFALHTMGFRGEALASIAAVAQVELKTRQQSDEVGTQ 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G + P + G+ +V +LFF +PAR FLKS E N I +R+ + YP Sbjct: 125 LTIAGSRFLGQEPCSCPVGSNFKVENLFFNVPARRKFLKSNTTELNNIIAAFQRIVLVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SFT + + + GN +RI V G+ + + +N ++ ++ G+ G P Sbjct: 185 ALSFTLHSNDTELINLRA----GNLRQRIVDVFGKRLNQDLLSVNVETTLCSIHGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + +A+ +P G L E+ P +DVN+H Sbjct: 241 ESARKKGAHQYFFVNGRYMKHPYFAKAVMSAFERLVPQGEQVPFFLYFEVAPENIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-------------KKMISSFHQ 347 P K+ I+F N I + ++++A+ + +S+ Sbjct: 301 PTKTEIKFENEQAIWQILSAAVREAVGMFNDVPAIDFDTVGKPDIPVFSGSDAEVSAPRV 360 Query: 348 DNAP---KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV-------- 396 P P ATSL+ + + + L S+ + V Sbjct: 361 AYNPGYNPFSQPSPATSLSASPGSWQRESSVPDRWQELYEGLGRSSQSRETVIFADEEVR 420 Query: 397 -----EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 ++ + + A Q YI++ GL+I+DQH AH R+++E+ + K Sbjct: 421 SAASGADAHSVISEKSPAHYQYKGKYIMTAVKSGLMIIDQHRAHVRILYEQYLDRLQAHK 480 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 SQ +L PE+++L L+ + +L LG + G N+ AI +PA + + + Sbjct: 481 CESQKVLFPEVVELSAAGGVLMQKMMPELEALGFELTPMGGNSYAINAVPAGVDGVDYVR 540 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 L+ +++D+ D ++ + + ++ ++A +I G+ + + EM ++ + N + Sbjct: 541 LVTEMLDDAAD-KSSDSSEAIRRSLALSLARSMAIPYGQVLGNAEMENVVNSLFACSNVN 599 Query: 572 QCNHGRPTFIKLKLSDIEKL 591 GR L+ +I+ L Sbjct: 600 YAPDGRKVLAILRQQEIDHL 619 >gi|288924573|ref|ZP_06418510.1| DNA mismatch repair protein MutL [Prevotella buccae D17] gi|288338360|gb|EFC76709.1| DNA mismatch repair protein MutL [Prevotella buccae D17] Length = 621 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 166/620 (26%), Positives = 295/620 (47%), Gaps = 36/620 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ IKEL+ENS+DA ++ + ++ G++ Q+TDNG G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENSVDAGATVINVLVVDAGRTSIQVTDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI DD +HT GFRGEAL SI AV+ + L +R + G Q Sbjct: 65 MSDTDARLSFERHATSKIRQADDLFALHTMGFRGEALASIAAVAQVELKTRQQSDEVGTQ 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G + P + G+ +V +LFF +PAR FLKS E N I +R+ + YP Sbjct: 125 LTIAGSRFLGQEPCSCPVGSNFKVENLFFNVPARRKFLKSNTTELNNIIAAFQRIVLVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SFT + + + GN +RI V G+ + + +N ++ ++ G+ G P Sbjct: 185 ALSFTLHSNDTELINLRA----GNLRQRIVDVFGKRLNQDLLSVNVETTLCSIHGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + +A+ +P G L E+ P +DVN+H Sbjct: 241 ESARKKGAHQYFFVNGRYMKHPYFAKAVMSAFERLVPQGEQVPFFLYFEVAPENIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-------------KKMISSFHQ 347 P K+ I+F N I + ++++A+ + +S+ Sbjct: 301 PTKTEIKFENEQAIWQILSAAVREAVGMFNDVPAIDFDTVGKPDIPVFSGSDAEVSAPRV 360 Query: 348 DNAP---KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV-------- 396 P P ATSL+ + + + L S+ + V Sbjct: 361 AYNPGYNPFSQPSPATSLSASPGSWQRESSVPDRWQELYEGLGRSSQSRETVIFADEEVC 420 Query: 397 -----EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 ++ + + A Q YI++ GL+I+DQH AH R+++E+ + K Sbjct: 421 SAASGADAHSVISEKSPAHYQYKGKYIMTAVKSGLMIIDQHRAHVRILYEQYLDRLQAHK 480 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 SQ +L PE+++L L+ + +L LG + G N+ AI +PA + + + Sbjct: 481 CESQKVLFPEVVELSAAGGVLMQKMMPELEALGFELTPMGGNSYAINAVPAGVDGVDYVR 540 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 L+ +++D+ D ++ + + ++ ++A +I G+ + + EM ++ + N + Sbjct: 541 LVTEMLDDAAD-KSSDSSEAIRRSLALSLARSMAIPYGQVLGNAEMENVVNSLFACSNVN 599 Query: 572 QCNHGRPTFIKLKLSDIEKL 591 GR L+ +I+ L Sbjct: 600 YAPDGRKVLAILRQQEIDHL 619 >gi|305666510|ref|YP_003862797.1| putative DNA mismatch repair protein [Maribacter sp. HTCC2170] gi|88708777|gb|EAR01012.1| putative DNA mismatch repair protein [Maribacter sp. HTCC2170] Length = 616 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 155/620 (25%), Positives = 303/620 (48%), Gaps = 39/620 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KEL+EN++DA + ++ +I GGK+ + D+G G Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGAKSIKLIIKDGGKALIHVIDDGIG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M++ + ++ +RH TSKI ++D N++T GFRGEAL SI A++H+ + ++P Q Sbjct: 65 MSATDARLSFERHATSKIQKAEDLFNLNTKGFRGEALASIAAIAHVEMQTKPEQEEMATH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I G +I GT + V++LFF IPAR NFLKS QVE ITD R+A+A+P Sbjct: 125 LRIEGSEIKFQEVCVAPKGTSMSVKNLFFNIPARRNFLKSNQVELRHITDEFHRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F F S + + + +RI + G V +NE++ + + G+ P Sbjct: 185 HIAFHFYNNGSELFILP----EASQRQRIVHIFGSRTNEKLVPVNEETQVVKISGFINKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + + F+N R ++ ++ + +A+ I YP L L++DP +D+N+H Sbjct: 241 EFAKKSRGEQFFFVNNRFIKSPYLHHAVLSAFEGLIKTDSYPGYFLYLDVDPGSIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------- 341 P K+ ++F + + + +++ ++ + + + + Sbjct: 301 PTKTEVKFDDEHTLYAILRSTVKHSLGQFNVVPALDFEQDQNLATPYNYKNKDASQPNVT 360 Query: 342 ----ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ-ENRLSTNDLLPSDDPTYSEDNDPV 396 + F + + + T E L++ E+++ +D S + Sbjct: 361 VDSGFNPFQEVAQKSQGVRTFKKQNTEGWENLYVGLESKVGKDDNFSSLKFESETITGSI 420 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 E + + Q+ + YI++ G+V++DQ AH+R+++E+ ++ + SQ Sbjct: 421 FEGQQESLESIATTFQLRRKYIVTTIKSGMVVIDQSRAHQRVLYEQFLKNITVNEAVSQQ 480 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI----PQL 512 LL P + + + A++ E E L +G + + I +P ++S+ + QL Sbjct: 481 LLFPLSLSFSKTDIAVLKEIKESLTTIGFVFSKVENEEVKITGVPLMVSESEVGIVLDQL 540 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + D E+ + S + T + + T+A ++R+G + + L+ ++ S Sbjct: 541 ISDFQMEVTEDSFSQT-----DVLAKTLAKTLAVRTGEVLNNASQLALVNDLFACKESMV 595 Query: 573 CNHGRPTFIKLKLSDIEKLF 592 +P +I + +DI+K F Sbjct: 596 SPFNKPVYITITENDIDKKF 615 >gi|124004454|ref|ZP_01689299.1| DNA mismatch repair protein MutL [Microscilla marina ATCC 23134] gi|123990026|gb|EAY29540.1| DNA mismatch repair protein MutL [Microscilla marina ATCC 23134] Length = 650 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 184/644 (28%), Positives = 315/644 (48%), Gaps = 59/644 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + I NQIAAGE+++RP+ +KEL+EN++DA+S V+ +I GK Q+ D+G G Sbjct: 5 IQLLPDSIANQIAAGEVVQRPASVVKELMENAIDAKSRNVKVIIKDAGKILIQVVDDGCG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI SDD +I+T GFRGEAL SI AV+ + L ++ Q+ G Sbjct: 65 MSETDARLSFERHATSKIRSSDDLFSIYTMGFRGEALASIAAVAEVELKTKREQDELGVF 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ++ ++ + A GT + V++LFF +PAR NFLKS VE I D R+A+AYP Sbjct: 125 LCMAASQLKTQEANACQHGTSIAVKNLFFNVPARKNFLKSNAVEMRHILDQFHRIALAYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + Y + G RI+ + G+++ + E + I ++GY G P Sbjct: 185 EVNFSLYHNDTEVYNLYA----GKMVNRITAIFGKNYRDKLAFCQEDTPLIKIKGYIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + F+N R ++ ++ + A+ I +P VL ++IDP +D+NVH Sbjct: 241 ENAKKTRGDQFFFVNNRYIRHGYLHHAVMGAFEGLIASDMHPFYVLFIDIDPVHIDINVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM----------------ISS 344 P K+ I+F + I I +++K++ ++ + + S+ Sbjct: 301 PTKTEIKFDDERTIYAIIQAAVKKSLGSHNLTPTLDFQTNVNLDPTLPQRQQFPNSDTSA 360 Query: 345 FHQDN--------------APKTHLPKYATSLTNTQ------EKLFLQENRLSTNDLLPS 384 F P P+ +L+N Q EK ++EN T D Sbjct: 361 FESGGEKGGSSSSSGYTSSRPYEKSPQEKRNLSNWQKIYEGLEKKAIEENSPDTFDFDKE 420 Query: 385 DDPTYSEDNDPVEESEAT--------------HYQLGIACAQIHQNYIISQTTDGLVIVD 430 SE E + Q++ YII+ GL+++D Sbjct: 421 LKGETSEQTLTFESNANNLGKQPREEGKGLEAKPSGERPSFQVNNQYIITPVRSGLMMID 480 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 Q AAHER++++K + T+Q LL P + L + L++E + ++ LG E Sbjct: 481 QQAAHERVLYDKFVVSLKNDNGTAQQLLFPTTVSLQPADFQLVLEIETEIRNLGFIFELL 540 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA-TMACYGSIRSG 549 N + IR +PA ++ +N +L I++ + T ++ E +LA ++A +IR+G Sbjct: 541 PDNRLEIRGVPADITNENEQELFEGFIEQFKNYQATLKVE--RETLLARSLAKRSAIRTG 598 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 K+ +IEMN L+ ++ + N + GRPT + L L ++ F Sbjct: 599 AKLTAIEMNLLVDQLFASSNPNYTPDGRPTLVMLPLDKMKDFFE 642 >gi|260893757|ref|YP_003239854.1| DNA mismatch repair protein MutL [Ammonifex degensii KC4] gi|260865898|gb|ACX53004.1| DNA mismatch repair protein MutL [Ammonifex degensii KC4] Length = 560 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 184/595 (30%), Positives = 289/595 (48%), Gaps = 40/595 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L ++ +AAGE++ERP+ +KEL+EN+LDA++ R+ + + D+G Sbjct: 3 KIKVLDPDTVSLVAAGEVVERPASVVKELVENALDAQARRITVRVEKD-FGPITVVDDGC 61 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++E+ +A RH TSKIS D NI T GFRGEALPSI AVS LT+ +R P G Sbjct: 62 GIPADEVLLAFSRHATSKISTARDLENITTLGFRGEALPSIAAVSRLTMKTREPGAEEGV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I+G ++ V PGT V VRDLF+ +PAR FL S + E++ I D++ +A+A+ Sbjct: 122 LVEIAGGEVLRKETVGAPPGTQVVVRDLFYNVPARRKFLSSWRAESSHIVDLLEHLALAW 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF+F F + ++ + G + + + L E+ + G+ G Sbjct: 182 PEVSFSFWLAGREV----FHTPGTGLLPALTAIYGAEVTSTLLPLEAGKGELKVSGFLGK 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P RG+ + +N R V+ + I A+ +P G+YP VL LE+ PR VDVNV Sbjct: 238 PELARGHRRHQVIVVNRRLVKHYGLAQAIAEAFGSLLPAGKYPFFVLFLELPPRMVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ +RF N + +++++A+ + A P Sbjct: 298 HPQKTVVRFANEGEVLALCREAVKRAL----------------FGERRPMAKALPSPPPR 341 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + +E F + ST D + P Y + + YI+ Sbjct: 342 SWDEALRELRFSVKEVASTADRVAESSPAYL----------FSFLPQLTYLGFLPPVYIL 391 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 +Q +GL +VDQHAAHER++FEK + + + SQ L++P ++L E Sbjct: 392 AQGPEGLYVVDQHAAHERILFEKYAEAVENQGVPSQGLVSPVPVNL---RGREWEEIAPH 448 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 + R G E FG +R IPA L LL +++ + + R +LA Sbjct: 449 IARFGFVLEPFGRGTALLRAIPADLEVAAACLLLEELLTSWEE----IPVPRREREVLAL 504 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MAC+G++R+G + LL ++ + C HGRPTF L ++EK GR Sbjct: 505 MACHGAVRAGDTLPPPLAQELLNQLAACREPTVCPHGRPTFFSLSYQELEKRLGR 559 >gi|220929118|ref|YP_002506027.1| DNA mismatch repair protein MutL [Clostridium cellulolyticum H10] gi|219999446|gb|ACL76047.1| DNA mismatch repair protein MutL [Clostridium cellulolyticum H10] Length = 665 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 171/665 (25%), Positives = 294/665 (44%), Gaps = 76/665 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E N+IAAGE++E+P+ +KEL+ENS+DA ++ + I GG S+ +I DNG Sbjct: 3 RIIVLDENTSNKIAAGEVVEKPASVVKELVENSIDAGATSISVDIKNGGISYIKIADNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +++ +A +RH TSKI ++D ++ T GFRGEAL SI +V+ + LM++ + G Sbjct: 63 GMDEDDVEIAFERHATSKIKRAEDLDSVITMGFRGEALASIASVASVELMTKTAASAYGM 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + VR GT ++DLFF PAR FLK + E I+D I R+A+ Sbjct: 123 YVHVRGGVLQDVRQTGCPVGTTFIIKDLFFNTPARYKFLKKDSTEAGYISDTISRIALGN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF + + + + N + I + G++ I N V + +++ + GY G Sbjct: 183 PNISFKLT---NGKTPLIHTPGNNDLKSVIYSIYGKEIIKNLVHIEYADDKVKISGYIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N ++IN R V+ K + ++ A++ + R+P VL ++I+P VD NV Sbjct: 240 PEAARSNRNYQSLYINKRYVKSKLVSYSVEQAFSSILMKNRFPFFVLNIDINPILVDANV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKG---ISTSSVLSKKMISSFHQDNAPKTHLP 356 HPAK +RF + + + I ++ A+ G S + + F ++ PK Sbjct: 300 HPAKIEVRFADESYLSRTIYMAVSNALTTGGGLFNPVSVPDKDRELFKFADNSQPKKEYV 359 Query: 357 KYATSLTNTQEK----------------------------LFLQENRLSTNDLLPSDDPT 388 + L N QE+ Q S+ S+D Sbjct: 360 QNEIQLNNKQEENKKADEIRLFTKALEPLAKVDVHKVSTAAEKQPADTSSFTFTRSEDYN 419 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDF 447 + + + + + + + SQ D + DQ ER+ E + Sbjct: 420 VGQPKNLITNVKQENSDELKNNSPGIREDDSSQNFDETINKQDQEVNKERVYTELADMKY 479 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHD------------------------------ 477 ++ LL ++ + A Sbjct: 480 IGQAFSTYILLQNNDELVMVDQHAAHERIIYEKLRAKFDSQENTTQLLLEPVVIQLQPFE 539 Query: 478 --------EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 + L +G E FG N I IR IP ++ + + ++ ++ +S + Sbjct: 540 IDTIKAKEKLLTGIGFVYEDFGNNTIIIRGIPYMVGDYSPRDIFIELTQKLQESIKPVST 599 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 + I+ T+AC +I++ +K+ E+++LL E+ C HGRPT I+L ++IE Sbjct: 600 P-LADEIIHTIACKAAIKANKKLDEKEVHQLLTELSNTGRRYTCPHGRPTVIRLTKNEIE 658 Query: 590 KLFGR 594 K+F R Sbjct: 659 KMFKR 663 >gi|332878096|ref|ZP_08445826.1| DNA mismatch repair protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684058|gb|EGJ56925.1| DNA mismatch repair protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 616 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 161/617 (26%), Positives = 290/617 (47%), Gaps = 31/617 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DA ++R++ ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAVDASATRIDVLVEDAGKTSIQVVDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +R + G Sbjct: 65 MSETDARLSFERHATSKIREASDLFALRTMGFRGEALASIAAVAQVELRTRQAGSELGTC 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I G ++ PV+ PG+ +R+LFF +PAR FLKS Q E + I R+A+ + Sbjct: 125 VNIEGSQLVGQEPVSCAPGSNFLIRNLFFNVPARRKFLKSNQTELSNILQEFERVALVHE 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F+ + S + +RI + G+ + ++ +++ + L G+ G P Sbjct: 185 DIAFSLTQNGSVVLSLP----KSTLRQRIINIFGKKLNEQLLAVDVETSLVRLSGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + A+ + IP+G L E+DP +DVN+H Sbjct: 241 DSARKKGAHQYFFVNGRYMRHPYFHKAVMEAFEQLIPVGEQVSYFLYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ I+F N I I+ ++++++ + + + + + A Sbjct: 301 PTKTEIKFENELAIWQIIVAAVKESLGRFNAVPTIDFNTEGALDIPVFGNAFSPATVEAP 360 Query: 361 SLT-NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN--- 416 L N F + +P Y + + G + + + Sbjct: 361 VLEVNPDFNPFKSGSSSGYKSQRMDWEPLYDGMEKSASPAVTNDFGGGDFSSSVPDDLTL 420 Query: 417 --------------------YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 YI++ GL+I+DQH AH R+++++ R+ + SQ Sbjct: 421 YADTKDTFEKSTQHYQYKGKYIMTAVKSGLMIIDQHRAHIRVLYDRYRKQMEGSNGQSQG 480 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 LL PE++ L E ++ +DLH LG G + +I +P+ N +++R I Sbjct: 481 LLFPEMLQLPPSEGIVLEHLADDLHALGFDLSVLGGGSFSINAVPSGTEGLNPVEMVRGI 540 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 + I+ +D I ++A +I G+ + + EM L+ ++ N +Q G Sbjct: 541 VHSSIEKGC-NVEEDVRHYIALSLARSAAIVQGQVLSNEEMEALVDDLFVCRNPNQTPDG 599 Query: 577 RPTFIKLKLSDIEKLFG 593 + L+ D+++LFG Sbjct: 600 KVVVAILEQDDLDQLFG 616 >gi|146297051|ref|YP_001180822.1| DNA mismatch repair protein MutL [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410627|gb|ABP67631.1| DNA mismatch repair protein MutL [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 599 Score = 464 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 172/600 (28%), Positives = 302/600 (50%), Gaps = 9/600 (1%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M+ + +LSE+I + +AAGE++ERP+ +KE+IENS+DA +S ++ + GG ++ DN Sbjct: 1 MRELNRLSEEITHILAAGEVVERPASCLKEVIENSIDAGASLIDIKLEKGGIKKIEVYDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ S++I +RH TSKI DD I T GFRGEAL +I +VS +TL+SR + Sbjct: 61 GKGIHSDDIEYVFERHTTSKIKSVDDIFKITTMGFRGEALCAISSVSKVTLISRHYEQEQ 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ + G K+ S GT + + DLF+ PARL FLKS E +V+ ++AI Sbjct: 121 GCKVEVEGGKVLSKTIYPFEKGTRITIEDLFYNTPARLKFLKSPSAEQKYCIEVVEKIAI 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 YP++SF + F + I+ V G + + N ++ + + + + G+ Sbjct: 181 CYPEISFRMQVDNKRQL---FTPGDSKVESAIASVFGSEILKNLIDFSHQEEGLKVWGFF 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P ++ + ++ ++N R ++ K + + I A+ +I GR+P+V L +EI+P +DV Sbjct: 238 VNPVLSKSTRSGYHFYVNRRFIRSKLLSTCIDEAFKNSILTGRFPIVFLFIEINPIDIDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK I+F++ + N + +++ + + + L + QD +L Sbjct: 298 NVHPAKLEIKFKDERYVYNTVYKTVSSTLQSEKMIPKPTLDNLYLPQSVQDVKMVRNLWS 357 Query: 358 Y---ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 Y S ++ F + ++ + + SE + + Sbjct: 358 YTQEQQSKEKAFQEDFNEFLKIEEQLDFSKVEVGKESKDVITVFSEEFNVETYKIVGYAF 417 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 YII Q D L ++DQHA HER +FE ++++ KI Q LL+P +I+L + + Sbjct: 418 DTYIIVQKEDSLYLIDQHAVHERRLFELLKEEIFRNKIQRQILLSPIVIELPISQKEFAL 477 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 E+ +LG + + FG N I +R P + + DII+ I + S + E Sbjct: 478 ENVHIFEKLGFEIDDFGKNEIVVRTYPLLFEGAVDKFFILDIIEMIYNESVEKGITHFSE 537 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +L +AC +++ + +E +++ + C HGRP I+++ +IEK+F R Sbjct: 538 ELLKKIACRAAVKGNMNISDLEKEEIVKLVLVEKKIFNCPHGRPVVIEIQKREIEKMFKR 597 >gi|116333842|ref|YP_795369.1| DNA mismatch repair protein [Lactobacillus brevis ATCC 367] gi|122269471|sp|Q03R34|MUTL_LACBA RecName: Full=DNA mismatch repair protein mutL gi|116099189|gb|ABJ64338.1| DNA mismatch repair protein MutL [Lactobacillus brevis ATCC 367] Length = 672 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 161/662 (24%), Positives = 284/662 (42%), Gaps = 75/662 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L+ + +QIAAGE++ERP+ +KEL+EN++DA S++++ + G + D+G Sbjct: 3 KIHELASVLADQIAAGEVVERPASVVKELVENAIDAHSTQIDITVEEAGLQRIVVVDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ MA +RH TSKI+D D I + GFRGEALPSI +V+ +TL++ G Sbjct: 63 GIADEDSEMAFKRHATSKITDRRDLFRIKSLGFRGEALPSIASVADVTLITSTGG--VGT 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I G I + GT V V++LF +PARL +LKS E ITD++ R+A++Y Sbjct: 121 EIHNVGGIIQEHKAAEARKGTTVIVKELFGNVPARLKYLKSPATELARITDIVNRLALSY 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F+ ++ + G+ + I+ + G V ++ ++ + + GY + Sbjct: 181 PTVAFSLVHNGR---ELTRTTGRGDLQQVIAGIYGVQSARKMVAISGQNPDFRVSGYVSL 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + + +NGR + + + + Y + +GRYP+ VL +++DP VDVNV Sbjct: 238 PELTRASRQYISLLLNGRYIHNFQLSKALIAGYGSKLMVGRYPLAVLDIQMDPLLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--------------- 344 HP K +R + I +++ K ++++ + + Sbjct: 298 HPTKQEVRISQEAELTQLIQETVFKRLSQENLIPDVFDEVQTKQPETKTTDQLTMALNDV 357 Query: 345 -----------------FHQDNAPKTHLPKYATSLTNTQ--------------------- 366 + A + ATS+ Sbjct: 358 SAKYDMSDRQVLGAQQMPSESVAQPSDAAPVATSMGQPAPLQTPEEVPVEPVVVHDKRDF 417 Query: 367 -----EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 ++ + + L + + D VE + + + Q Sbjct: 418 ATPAVQRFDAKYRQEQVAAPLGQSAASAAVDQPAVEATAPIEPVQATPAQRFPTLRYLGQ 477 Query: 422 TTDGLVIVD---------QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 ++ + QHAA ER+ +E RQ Q LL P ++D + Sbjct: 478 VHGTYLLAEADDGLYLVDQHAAQERVNYEFYRQAIGEVSDDEQKLLVPIVLDYPTTDVLE 537 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + H E L +GI + FGPN+ + E P ++++ID ++ ++ Sbjct: 538 LTNHLETLASVGIHLDSFGPNSFIVHEHPTWFKAGQETATIQEMIDWVLKDGKI-SVAAF 596 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 E M+C +I++ + + LL+++ N C HGRP + D+EKLF Sbjct: 597 REKTAIMMSCKRAIKANHHLDDQQARALLQKLATAENPFNCPHGRPVLVHFTDQDLEKLF 656 Query: 593 GR 594 R Sbjct: 657 KR 658 >gi|260063474|ref|YP_003196554.1| putative DNA mismatch repair protein [Robiginitalea biformata HTCC2501] gi|88782918|gb|EAR14092.1| putative DNA mismatch repair protein [Robiginitalea biformata HTCC2501] Length = 623 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 151/623 (24%), Positives = 293/623 (47%), Gaps = 38/623 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E + NQIAAGE+++RP+ +KEL+EN++DA +SRV+ ++ GGK+ Q+ D+G Sbjct: 4 RIKLLPEHVANQIAAGEVVQRPASVVKELLENAVDAGASRVQLIVKDGGKALVQVVDDGC 63 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ + ++ +RH TSKIS+ D +HT GFRGEAL SI A++ + + +R Sbjct: 64 GMSPADALLSFRRHATSKISEASDLFRLHTKGFRGEALASIAAIAQVEMQTREDGAELAT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I+G+ + S GT + V++LFF IPAR NFLKS++VE + + +R+A+A+ Sbjct: 124 RIRIAGDTVQSREEAVAPVGTSISVKNLFFNIPARRNFLKSDKVEYRHVLEEFQRVALAH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F+ S +++ N +RI + G V + E++ + G+ Sbjct: 184 PGVAFSMVHNDSEVHQLP----EANLRQRIVHLFGSRMNTRLVPVREETQLAEIDGFICK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F + + + Y F+N R ++ ++ I TA+ + YP L L++ +D+N+ Sbjct: 240 PEFAKKSRGEQYFFVNDRFIRSAYLHHAILTAFEGLLKPDTYPGYFLYLQVPAGAIDINI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-------------------- 339 HP K+ ++F + + + +++ ++ + IS + Sbjct: 300 HPTKTEVKFEDEQSLYAILRSAVKHSLGQFSISPVLDFERDPNLETPYAYQQRDAAVPKV 359 Query: 340 ---KMISSFHQDNAPKTHLP--KYATSLTNTQEKLFLQ------ENRLSTNDLLPSDDPT 388 + + F +++A + P ++A +++ + + + Sbjct: 360 SVDRTFNPFAEEHALRDSQPAARHAQPAAPREKRPGWEVLYDGGNPEAVSEETREGWTVA 419 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + + A Q+ + Y++S GL+++DQ AH+R+I+E+ + Sbjct: 420 SGGSEGALFRANAAEIPEQAGVFQVGRKYLLSHIKSGLLLIDQRRAHQRVIYERFLRSTT 479 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + +Q LL P L E ++ E L +G R G + + I +P + + Sbjct: 480 QREPATQALLFPLKPSLNPSEIHILEGLKEALEAMGFGFGRTGEDFVEITGLPVGVPESE 539 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 +L I+ + + + I +A ++R G ++ E L+ ++ Sbjct: 540 AESILDGIVSDWQRHEDGVHF-SQSDRIAKALAQSLAVRHGTALEQEEQLGLVNDLFGCK 598 Query: 569 NSSQCNHGRPTFIKLKLSDIEKL 591 G+PT++ L + ++EK Sbjct: 599 EPGTSPFGKPTYVTLSMEELEKK 621 >gi|254443136|ref|ZP_05056612.1| DNA mismatch repair protein MutL [Verrucomicrobiae bacterium DG1235] gi|198257444|gb|EDY81752.1| DNA mismatch repair protein MutL [Verrucomicrobiae bacterium DG1235] Length = 617 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 177/610 (29%), Positives = 292/610 (47%), Gaps = 22/610 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K+R L + + NQIAAGE+IERP+ +KEL+ENS+DA S+R+E GG S +I DNG Sbjct: 3 KVRLLPDHVANQIAAGEVIERPASVVKELVENSIDAGSTRIEVEFRNGGTSLMRIEDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ ++ +A++RH TSKI D + T GFRGEALPSI +VS L +R +G Sbjct: 63 GMSHDDALLALERHATSKIEKVKDLDGLSTMGFRGEALPSIASVSRFQLQTREADTESGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G K+ VR M GT + + LF T+PAR FLKS E+ I +R A+A+ Sbjct: 123 EVVIDGGKMLHVRDCGMPQGTRMTITKLFNTVPARRKFLKSVTTESAHIVHCVRLYALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ F+ + ++ + R++++ G+ +N +E++ + + L G G Sbjct: 183 PEIGFSLLDDGRSLFQ---SPACASLRNRVAEIFGKQMVNKLIEVDAAEDGMRLHGLIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +R + ++ F+N R V++K + + +Y I GRYPV L L+IDP +VDVNV Sbjct: 240 PTLSRSSRHEMLFFVNNRPVENKTLSYALVESYYGHIAKGRYPVAFLFLDIDPERVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS-----------TSSVLSKKMISSFHQD 348 HPAK IRFR R F ++++ +A+ + S S K + + Sbjct: 300 HPAKREIRFREEAKARGFAVRTLLEALRAETESYRNIKPVEVKLPSKAEPKIEVEAIQPT 359 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH--YQL 406 + + + +L QE L + + E + Sbjct: 360 RPKLPPVAAKPEAPAKSVRRLVQQEKSTPKAVALKREVEKPAPAQKVKVEPVPVESKERN 419 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 + T G+V+++ AA +R+++E++ DF + I Q LL + ++L Sbjct: 420 WNYLGWAQGEFATFDTGSGVVLLNVRAAEQRILYERLNSDFAANAIRCQKLLIAQPVELD 479 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 AL+ E RLG + FG N I P L + +++ + + S + Sbjct: 480 PVSSALLEESLAFFGRLGFEIAPFGRNFFRIEGTPTWLEDGEAEEFVKETLALLRQGSLS 539 Query: 527 YTLQDRIENILATMACYGS--IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 + ++A A + R GR+ E+++LL + GRP+ I++ Sbjct: 540 GEKEGVAVELIAKRA--AAKLRRPGREPSQSEIDQLLERLFACEKPLTDPEGRPSLIEIS 597 Query: 585 LSDIEKLFGR 594 +I+K F R Sbjct: 598 TGEIDKRFQR 607 >gi|260583987|ref|ZP_05851735.1| DNA mismatch repair protein HexB [Granulicatella elegans ATCC 700633] gi|260158613|gb|EEW93681.1| DNA mismatch repair protein HexB [Granulicatella elegans ATCC 700633] Length = 662 Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats. Identities = 183/652 (28%), Positives = 304/652 (46%), Gaps = 64/652 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LS + NQIAAGE+IERPS +KEL+EN++DA S+R+ I G +ITDNG Sbjct: 3 KIKELSALLTNQIAAGEVIERPSSVVKELLENAVDAGSTRIVIEIEEAGLKLIRITDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E+ ++++RH TSKI + I T GFRGEAL SI AVS +T+ + G Sbjct: 63 GMSREDAVLSIRRHTTSKIYSPEQLFRIKTLGFRGEALASITAVSKVTVTTST-GEEVGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + I V GT +EV DLF+ PARL F+++ Q E ITDV+ ++++++ Sbjct: 122 QLKVESGTIVEETQVPPLKGTTIEVSDLFYNTPARLKFVRTLQTEIAHITDVVSKISLSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++S + ++ + NG+ + I+ +G + + + ++ + GYT + Sbjct: 182 PEISIILRNEGN---ELIRTAGNGDLRQAIAGNLGPTNARKMLAFSGEDDDFKVSGYTSL 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N +FINGR++++ I I Y T+ +GR+P+ V+ +E+D + VDVNV Sbjct: 239 PELTRSNRNYISIFINGRSIRNIAISKAIVAGYGSTLMVGRFPITVIDIEMDFQLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS--VLSKKMISSFHQDNAPKTHLPK 357 HP K +R + I ++I ++I S L K S+ P Sbjct: 299 HPTKQEVRISKEVELSALIQKAIHESIQGVQRIPESLEDLPFKRKSTESTTARPVVEQET 358 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLP------------------------------SDDP 387 L Q + ++ + +++ Sbjct: 359 LNFDLKPVQPSIRVETPSEWIQEDEITSYTSEAVSLEELPLETEESPFKGEISKELTEEI 418 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQ-------------------------NYIISQT 422 N E E A + Y+ +Q Sbjct: 419 PVQITNHNKEGCEDCRIDFHQEKANYWKLSQELDEENFETDFPELHYFGQMHGTYLFAQN 478 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 GL ++DQHAA ER+ +E + SQ+L+ P I++ + E + E E + Sbjct: 479 EKGLYMIDQHAAQERIKYEIFKVSIGEVAPVSQSLMIPIIMEFSKKEALKLQESLEMIRE 538 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMAC 542 GI+ E FG + I+ P+ + + +++ +IID ++ S+ T+ + M+C Sbjct: 539 FGIEIEPFGTHTFQIQSHPSWIKQGEEKEIIEEIID-LVLSNQKVTVAQLRKATAIMMSC 597 Query: 543 YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 GSI++ ++ ++E +LL ++ K N C HGRP + L D+EKLF R Sbjct: 598 KGSIKANHRLTTLEAEQLLVDLAKCKNPYNCPHGRPVLVHLSNKDLEKLFKR 649 >gi|150008991|ref|YP_001303734.1| DNA mismatch repair protein mutL [Parabacteroides distasonis ATCC 8503] gi|298375777|ref|ZP_06985733.1| DNA mismatch repair protein MutL [Bacteroides sp. 3_1_19] gi|167017344|sp|A6LEJ8|MUTL_PARD8 RecName: Full=DNA mismatch repair protein mutL gi|149937415|gb|ABR44112.1| DNA mismatch repair protein mutL [Parabacteroides distasonis ATCC 8503] gi|298266814|gb|EFI08471.1| DNA mismatch repair protein MutL [Bacteroides sp. 3_1_19] Length = 615 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 175/615 (28%), Positives = 294/615 (47%), Gaps = 29/615 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RP+ +KEL+EN++DA +S ++ I GK+ Q+ D+G G Sbjct: 5 IHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKIS +D ++HT GFRGEAL SI AV+H+ L +R G Sbjct: 65 MSETDARMAFERHATSKISTAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGTELGTC 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++I+G + S+ P A N G+I V++LFF +PAR FLKS + E I + R+A+ P Sbjct: 125 LSIAGSNLESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFERIALVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V + + + + +RI + G+ + L+ +S+ +T+ G+ G P Sbjct: 185 QVGMSLYHNDAEIFNLP----ESGLRQRIINIYGKSLNQKLLSLDAQSSMVTISGFVGRP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + F+NGR ++ + I AY + IP G P + +DP +DVN+H Sbjct: 241 DSAKKRGALQFFFVNGRYMKHPYFHKAIMQAYEQLIPAGDMPNYFVYFTLDPSSIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K+ I+F N I ++ + ++A+ K + + N K P Sbjct: 301 PTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFDVEDAIDIPVYNPVKKSEPSTYK 360 Query: 357 --------KYATSLTNTQEKL----------FLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 Y T + +K F + + +D E + Sbjct: 361 APKVQVDSSYNPFDTTSYKKPEFDWSKLYQGFENDRVAVQRESETFEDAPIEELPAEASD 420 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 E ++ C Q YI++ GL I+DQH AH R++F++ + + SQ +L Sbjct: 421 PEKLFTEVSNPCYQYKGRYIVTSLKSGLAIIDQHRAHVRILFDQYLSNIRQQQGVSQQVL 480 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 PEI++ E A++ EDL +G G + AI +PA + + L++DI+D Sbjct: 481 FPEIVEFTAAEAAVLPSLLEDLCFVGFDLSNLGNDNYAINGLPAGIENLDPVNLVKDIVD 540 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 I++ + E I ++A +IR G+ + EM+ L+ + +S+ G+ Sbjct: 541 RAIETGCA-VHEKICEAIALSLAKAAAIRPGKSLSLEEMDHLIASLFSCSDSNLTPDGKT 599 Query: 579 TFIKLKLSDIEKLFG 593 L ++E+ F Sbjct: 600 IISMLTDEELERRFK 614 >gi|312130605|ref|YP_003997945.1| DNA mismatch repair protein mutl [Leadbetterella byssophila DSM 17132] gi|311907151|gb|ADQ17592.1| DNA mismatch repair protein MutL [Leadbetterella byssophila DSM 17132] Length = 602 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 162/597 (27%), Positives = 292/597 (48%), Gaps = 16/597 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ LS+ I NQIAAGE+++RP+ +KEL+ENS+DA + ++ ++ GK+ Q+ D+G Sbjct: 3 KIKLLSDAIANQIAAGEVVQRPASVVKELLENSIDAGALNLKLIVKESGKTLIQVIDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ + M+ +RH TSKI + D NI T GFRGEAL SI AV+ + + +R ++ G Sbjct: 63 GMSPTDARMSFERHATSKIKESIDLFNIRTMGFRGEALASIAAVAQVEMKTRREEDEVGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I I G ++ + GT + V++LFF +PAR FLKS VE I + +R+A+A+ Sbjct: 123 LIRIEGSEVVEQDFIQAAKGTSIAVKNLFFNVPARRKFLKSNPVEMKHIIEEFQRVALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF + +RI+ + + + + + +++ + + GY G Sbjct: 183 PDVSFILYHNDIEVMNLPA----ARLSKRITDALDKSYRDQLAKCEIETDVVKITGYVGK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + Y F+N R ++ ++ + A+ IP G +P L LEI P +D+N+ Sbjct: 239 PQSAKKTKGDQYFFVNKRFIKSNYLHHAVVNAFESAIPEGTHPFYTLFLEIHPENIDINI 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ I+F N +I + +++++I ++ S + + + + Sbjct: 299 HPTKTEIKFDNEQLIYAVLRSAVKQSIGVYNLTPSIDFDANINLTSGFEMPVRETPSLKP 358 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV---------EESEATHYQLGIAC 410 + T ++ +EN + + S + + + EE + Sbjct: 359 SPRTYVGSEINKKENLDNWEKMFESYSSVVNTEAEQTVLFTSKANREEPDDYQKTDETQI 418 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 Q+HQ YI++Q GL+I+ Q A+ER+++EK +D S + SQ LL P+ + L + Sbjct: 419 LQLHQTYILTQVKSGLMIIHQRYAYERVLYEKYLKDMQSAQNVSQQLLFPKTVTLSALDY 478 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 AL + + + +G E FG N I +P+ S ++ L + I++ ++ Sbjct: 479 ALSQDLLDLIRGIGFSIEEFGTNTYLINGVPSHFSDEDEAVLFKGILEAFKENENHRD-N 537 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 + E + T+A + R + ++ E+ L+ ++ + S G+P L L Sbjct: 538 SKKETLARTLAKRYAARQTKTLEKKELTHLIDQLFETAMPSISPDGKPIMRILPLEQ 594 >gi|270295718|ref|ZP_06201918.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273122|gb|EFA18984.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 638 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 165/637 (25%), Positives = 288/637 (45%), Gaps = 52/637 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ +KEL+EN++DAE+ + +I GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVVKELVENAIDAEAEEIHVLITDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIREAADLFALRTMGFRGEALASIAAVAEVELKTRPASEELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G K+ V+ G+ +++LFF IPAR FLK+ E + I R+A+ +P Sbjct: 125 LLIAGSKVEGQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTELSNILTEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F + + + + +RI V G+ + ++ + I + G+ P Sbjct: 185 EVAFYLYSNDTELFNLPVMP----LRQRIMAVFGKKLNQQLLSVDVNTTMIKISGFVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +R Y F+NGR ++ + + AY + IP G + E+DP +DVN+H Sbjct: 241 ETSRKKGAHQYFFVNGRYMRHPYFHKAVMDAYEQLIPAGEQISYFIYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + ++++++ K + I +F Q + Sbjct: 301 PTKTEIKFENEQAIWQILSAAVKESLGKFSAIPTIDFDTEDMPDIPAFEQARPIEPPKVH 360 Query: 358 YATSLTN--------------------TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 Y T E L+ + S + ++P + Sbjct: 361 YNTDFNPFKTSSASSYGGGGNYSRPKVEWEGLYSGLEKASRMNEPMEEEPFVEDTVTGTA 420 Query: 398 ESEATHYQL----------------------GIACAQIHQNYIISQTTDGLVIVDQHAAH 435 E G Q +I++ GL+++DQH AH Sbjct: 421 PREEERVPYFQETVPSGVSASFYGNEATVEKGAQHFQFKGRFILTSVKSGLMLIDQHRAH 480 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 R++F++ + SQ +L PEII L E A++ EDL +G G + Sbjct: 481 VRVLFDRYMSQIRQKQGVSQGVLFPEIIQLPASEAAVLESILEDLSAVGFDLSPLGGGSY 540 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 AI IP+ + N +L+R+++ ++ ++ + +T+A +I G+ + + Sbjct: 541 AINGIPSGIEGLNPVELVRNMVHTAMEKGN-DVKEEVQTILASTLARAAAIVYGQVLSNE 599 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 EM+ L+ + P+ + G+ +K DIEKLF Sbjct: 600 EMSNLVDNLFACPSPNYTPDGKTVLATIKEDDIEKLF 636 >gi|160890581|ref|ZP_02071584.1| hypothetical protein BACUNI_03024 [Bacteroides uniformis ATCC 8492] gi|317479877|ref|ZP_07938994.1| DNA mismatch repair protein MutL [Bacteroides sp. 4_1_36] gi|156859580|gb|EDO53011.1| hypothetical protein BACUNI_03024 [Bacteroides uniformis ATCC 8492] gi|316903951|gb|EFV25788.1| DNA mismatch repair protein MutL [Bacteroides sp. 4_1_36] Length = 638 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 165/637 (25%), Positives = 288/637 (45%), Gaps = 52/637 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ +KEL+EN++DAE+ + +I GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVVKELVENAIDAEAEEIHVLITDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIREAADLFALRTMGFRGEALASIAAVAEVELKTRPASEELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G K+ V+ G+ +++LFF IPAR FLK+ E + I R+A+ +P Sbjct: 125 LLIAGSKVEGQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTELSNILTEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F + + + + +RI V G+ + ++ + I + G+ P Sbjct: 185 EVAFYLYSNDTELFNLPVMP----LRQRIMAVFGKKLNQQLLSVDVNTTMIKISGFVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +R Y F+NGR ++ + + AY + IP G + E+DP +DVN+H Sbjct: 241 ETSRKKGAHQYFFVNGRYMRHPYFHKAVMDAYEQLIPAGEQISYFIYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + ++++++ K + I +F Q + Sbjct: 301 PTKTEIKFENEQAIWQILSAAVKESLGKFSAIPTIDFDTEDMPDIPAFEQARPIEPPKVH 360 Query: 358 YATSLTN--------------------TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 Y T E L+ + S + ++P + Sbjct: 361 YNTDFNPFKTSSASSYGGGGNYSRPKVEWEGLYSGLEKASRMNEPMEEEPFVEDTVTGTA 420 Query: 398 ESEATHYQL----------------------GIACAQIHQNYIISQTTDGLVIVDQHAAH 435 E G Q +I++ GL+++DQH AH Sbjct: 421 PREEERVPYFQETVPSGASASFYGNEATVEKGAQHFQFKGRFILTSVKSGLMLIDQHRAH 480 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 R++F++ + SQ +L PEII L E A++ EDL +G G + Sbjct: 481 VRVLFDRYMSQIRQKQGVSQGVLFPEIIQLPASEAAVLESILEDLSAVGFDLSPLGGGSY 540 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 AI IP+ + N +L+R+++ ++ ++ + +T+A +I G+ + + Sbjct: 541 AINGIPSGIEGLNPVELVRNMVHTAMEKGN-DVKEEVQTILASTLARAAAIVYGQVLSNE 599 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 EM+ L+ + P+ + G+ +K DIEKLF Sbjct: 600 EMSNLVDNLFACPSPNYTPDGKTVLATIKEDDIEKLF 636 >gi|304382086|ref|ZP_07364597.1| DNA mismatch repair protein MutL [Prevotella marshii DSM 16973] gi|304336684|gb|EFM02909.1| DNA mismatch repair protein MutL [Prevotella marshii DSM 16973] Length = 604 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 156/602 (25%), Positives = 277/602 (46%), Gaps = 18/602 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ IKEL+EN++DA + + + G++ Q+ D+G G Sbjct: 5 IQLLPDTVANQIAAGEVIQRPASVIKELVENAVDAGAETIHVSVTDAGRTSIQVIDDGCG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI DD +HT GFRGEAL SI AV+ + L +R G + Sbjct: 65 MSDTDARLSFERHATSKIRKADDLFALHTMGFRGEALASIAAVAQIELRTRLRGTQLGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 +++SG + + PV+ GT + V +LFF +PAR FLKS E + IT V R+ + P Sbjct: 125 LSVSGFQFTGQEPVSCAEGTNITVENLFFNVPARRKFLKSNATELSHITTVFERIVLVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + FT + + + + G +RI + G + + + + G+ G P Sbjct: 185 HIRFTLHSNGTELFNL----AQGTTRQRIIDIFGRKLNQELLPIKADTQLCRISGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + F+NGR ++ + + +AY +P G + +++P+ +DVN+H Sbjct: 241 ESARKRGARQFFFVNGRYMKHPYFAKAVMSAYERLVPAGEQIPYFIYFDVNPQDIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF-------HQDNAPKT 353 P K+ I+F N I + ++++ K S + + PK Sbjct: 301 PTKTEIKFENEQPIWQILSAAVRETFGKFNDVPSIDFDTQGKPDIPVFNPLPNHATTPKV 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 + + Q T ++ + E T L + + Sbjct: 361 NYNPFYNPFKEQAAHRRTQAPEQWEQIYEGLKGGTEAQHTLFPQAEERTDENLISEKSPV 420 Query: 414 H----QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 H YI++ GL+I+DQH AH R+++EK Q +Q +L PE + E Sbjct: 421 HYQYKGQYIMTAVKSGLMIIDQHRAHIRILYEKYMQQLTHHSGHAQQVLFPETVSFPPSE 480 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 AL+ ++ +G G AI IPA + N+ L+ +++ I+ T Sbjct: 481 AALLDRILPEMTGMGFDLTDLGGGTYAINGIPADIEGLNVVSLINEMVSTAIEQGT-DIR 539 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 +D ++ ++A +I G+ + + EM ++ + N + G+P L+ +IE Sbjct: 540 EDINHSLAMSLARQAAIPQGQVLNNDEMEAIVNALFACSNVNYTPTGKPVLCILEQKNIE 599 Query: 590 KL 591 ++ Sbjct: 600 QM 601 >gi|255014822|ref|ZP_05286948.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_1_7] Length = 615 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 175/615 (28%), Positives = 294/615 (47%), Gaps = 29/615 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RP+ +KEL+EN++DA +S ++ I GK+ Q+ D+G G Sbjct: 5 IHLLPDHIANQIAAGEVIQRPASVVKELVENAVDAGASNIQVNIKDAGKTLIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKIS +D ++HT GFRGEAL SI AV+H+ L +R G Sbjct: 65 MSETDARMAFERHATSKISTAEDLFSLHTMGFRGEALASIAAVAHIELRTRARGTELGTC 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++I+G + S+ P A N G+I V++LFF +PAR FLKS + E I + R+A+ P Sbjct: 125 LSIAGSNLESIEPEACNEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFERIALVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V + + + + +RI + G+ + L+ +S+ +T+ G+ G P Sbjct: 185 QVGMSLYHNDAEIFNLP----ESGLRQRIINIYGKSLNQKLLSLDAQSSMVTISGFVGRP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + F+NGR ++ + I AY + IP G P + +DP +DVN+H Sbjct: 241 DSAKKRGALQFFFVNGRYMKHPYFHKAIMQAYEQLIPAGDMPNYFVYFTLDPSSIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K+ I+F N I ++ + ++A+ K + + N K P Sbjct: 301 PTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFDVEDAIDIPVYNPVKKSEPSTYK 360 Query: 357 --------KYATSLTNTQEKL----------FLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 Y T + +K F + + + +D E Sbjct: 361 APKVQVDSSYNPFDTTSYKKPEFDWSKLYQGFENDRVAAQLESESFEDAPIEELPAEASN 420 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 E ++ C Q YI++ GL I+DQH AH R++F++ + + SQ +L Sbjct: 421 PENLFAEVSNPCYQYKGRYIVTSLKSGLAIIDQHRAHVRILFDQYLSNIRQQQGVSQQVL 480 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 PEI++ E A++ EDL +G G + AI +PA + + L++DI+D Sbjct: 481 FPEIVEFTAAEAAVLPSLLEDLCFVGFDLSNLGNDNYAINGLPAGIENLDPVNLVKDIVD 540 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 I++ + E I ++A +IR G+ + EM+ L+ + +S+ G+ Sbjct: 541 RAIETGCA-VHEKICEAIALSLAKAAAIRPGKSLSLEEMDHLIASLFSCSDSNLTPDGKT 599 Query: 579 TFIKLKLSDIEKLFG 593 L ++E+ F Sbjct: 600 IISMLTDEELERRFK 614 >gi|325955049|ref|YP_004238709.1| DNA mismatch repair protein mutL [Weeksella virosa DSM 16922] gi|323437667|gb|ADX68131.1| DNA mismatch repair protein mutL [Weeksella virosa DSM 16922] Length = 593 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 173/597 (28%), Positives = 297/597 (49%), Gaps = 18/597 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RPS +KEL+EN++DA +S ++ +I G+S QI D+G G Sbjct: 5 IQLLPDHVANQIAAGEVVQRPSSVVKELMENAVDAGASEIKVLIKDAGRSLIQIIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ ++ MA +RH TSKI +D +I T GFRGEAL SI AV+ + ++ G+ Sbjct: 65 MSMTDVRMAFERHATSKIRTTEDIFHITTKGFRGEALASIAAVAQVEAKTKLTDETLGSL 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I G + PV GT V V++LF+ +PAR NFLKS QVE I D +R+A+A+ Sbjct: 125 LVIEGGDVRVQEPVVTPSGTSVSVKNLFYNVPARRNFLKSNQVEFRHIQDEFQRIALAHE 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF S+ Y + GN +RI Q+ G+ +E+ E++ + ++GY G P Sbjct: 185 GISFQLIHNNSDVYYLKA----GNLKQRIVQIFGKKIETQLLEILEETEIVNIKGYVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + + + F+N R +++ ++ I A+ +P G P L LE+DP ++D+N+H Sbjct: 241 DSAKKSRGEQFFFVNNRFIKNAYLHKAITDAFEGLLPNGYTPSYFLYLELDPSKIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF--HQDNAPKTHLPKY 358 P K+ I+F T I + +I+ ++ + + S + +F H + P Sbjct: 301 PTKTEIKFEEDTKIFQLLRSAIKHSLGQFNVVPSLDFDQDPRWAFINHPKDKPIVEPKIM 360 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED----NDPVEESEATHYQLGIACAQIH 414 +S N + F Q T D SE N P E +L Q + Sbjct: 361 VSSDYNPFDNPFTQTKPTPTTIQANLDFYRESEILTQENTPTEALFELDSELPTQILQWN 420 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Y++ + L+++DQH AH+++++E+ + + LL P ++ I Sbjct: 421 LRYLVVEHLGELLVIDQHRAHQKVLYERFLRTKTDHALAQ-QLLFPIELEASPVNIERIK 479 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 +++L G F I + IP + + ++ + D I E+ D S + Sbjct: 480 TIEKELILYGFDLC-FREEMILVNAIPVDVDQSHVAGIFADFIAEL-DFSQGVDFESSFA 537 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 I A A +I+ G ++ +M L++++ + +G+P FIK+ L +IEK Sbjct: 538 KIFAKNA---AIKKGEILKKEQMVTLVQQLLMLDYPNFTPYGKPVFIKMNLQEIEKK 591 >gi|255011720|ref|ZP_05283846.1| putative DNA mismatch repair protein [Bacteroides fragilis 3_1_12] gi|313149555|ref|ZP_07811748.1| DNA mismatch repair protein mutL [Bacteroides fragilis 3_1_12] gi|313138322|gb|EFR55682.1| DNA mismatch repair protein mutL [Bacteroides fragilis 3_1_12] Length = 626 Score = 462 bits (1188), Expect = e-127, Method: Composition-based stats. Identities = 167/627 (26%), Positives = 293/627 (46%), Gaps = 41/627 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DAE+ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQNIHVLVTDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIREASDLFALRTMGFRGEALASIAAVAQVELKTRPESEELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I+G K+ S V+ G+ +++LFF IPAR FLK+ E + I R+A+ +P Sbjct: 125 IIIAGSKVESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTELSNILAEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + S + + +RI + G+ + + + + + GY P Sbjct: 185 EVAFSLYSNDSELFNLPACH----LRQRILSIFGKKLNQQLLSVEVNTTMVKVSGYVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + IP G + E+DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMDAYEQLIPAGEQISYFIYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + S+++++ K S I +F Q+ P Sbjct: 301 PTKTEIKFENEQAIWQILSASVKESLGKFNAVPSIDFDTEDMPDIPAFEQNLPPAPPKVH 360 Query: 358 YATSLTN------------------TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 + + E L+ + S + ++ E+ +EE Sbjct: 361 FNSDFNPFKPSVPSSGGGNYSRPKVDWEDLYGGLEKASKMNQPFAEPDPEPEEFAVIEEE 420 Query: 400 -------------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 E+ + G Q +I++ GL+++DQH AH R++F++ R Sbjct: 421 SIVTAAPATLYAGESAIMEKGTQHLQFKGRFILTSVKSGLMLIDQHRAHVRVLFDRYRAQ 480 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 + SQ +L PEI+ L E A++ + +DL +G G + AI +P+ + Sbjct: 481 IQQKQGFSQGVLFPEILQLPASEAAVLQDIMDDLSAVGFDLSDLGGGSYAINGVPSGIDG 540 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 N L+R ++ ++ ++ + + T+A +I G+ + + EM L+ + Sbjct: 541 LNPVDLVRSMLHTAMEKGN-DVKEEIQDILALTLARAAAIVYGQVLSNEEMVSLVDNLFA 599 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFG 593 P+ + GR +K +I+KLF Sbjct: 600 CPSPNYTPDGRVVLTTIKEEEIDKLFR 626 >gi|281421752|ref|ZP_06252751.1| DNA mismatch repair protein MutL [Prevotella copri DSM 18205] gi|281404247|gb|EFB34927.1| DNA mismatch repair protein MutL [Prevotella copri DSM 18205] Length = 622 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 163/625 (26%), Positives = 290/625 (46%), Gaps = 41/625 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ IKEL+EN++DA + + + G++ Q+ D+G G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENAVDAGARNIHVTVTDAGRTNIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + +A +RH TSKI DD + T GFRGEAL SI AV+ + L SR + G Sbjct: 65 MSETDARLAFERHSTSKIRKADDLFALRTMGFRGEALASIAAVAQVELKSRQATDEIGTL 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ISG + P + G++ V ++F+ +PAR FLKS E N I R+A+ P Sbjct: 125 IRISGSRYEKQEPCSCAVGSLFSVSNIFYNVPARRKFLKSNSTELNNILTAFERIALVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++FT + + + + N +RI V G+ F + +N ++ + G+ G P Sbjct: 185 QITFTLHSNGTEVFNLRA----ANLRQRILDVFGKRFNQELLPVNVETTMCKVSGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + F+NGR ++ + + AY +P G L ++DP+ +DVN+H Sbjct: 241 ESARKKGVHQFFFVNGRYMKHPYFNKAVMAAYDRLVPQGEQVPYFLYFDVDPKDIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKT---- 353 P K+ I+F N I + S++++I + K I ++ + + Sbjct: 301 PTKTEIKFENEQAIWQILSASVKESIGMFNDVPTIDFDTEDKPDIPVYNPEMSTAAAPKI 360 Query: 354 ------------------------HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 +PK + E+L+ + + + + Sbjct: 361 SLNPGYNPFKSSSSTGAVPMGSGFSVPKSKPQVDEKWEQLY-EGLKNQDDVQGMEQTMVF 419 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 S+D+ ++ + A Q YI++ GL+I+DQH AH R++FE+ + Sbjct: 420 SDDSSRDNTPDSIIAEKSPAHYQYKGKYIMTAVKSGLMIIDQHRAHVRVLFEQYLRQLAD 479 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 SQ +L PE++ E + + ++ +G + E G + A+ +P L N Sbjct: 480 RTFHSQKVLFPEVVQFPMSEKVIFEKILPEMESMGFELEDLGGGSYAVNSVPGGLEGLNP 539 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILA-TMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 +L++D++ ++ + D I LA ++A +I G+ + + EM L+ ++ Sbjct: 540 LKLVQDMVSSAVEKGVSAI--DEINQTLALSLARQAAIPQGQILSNEEMEGLVNDLFACQ 597 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFG 593 N + G+ L+ +IE L G Sbjct: 598 NVNYTPDGKSVLCILRQQEIEHLLG 622 >gi|331001790|ref|ZP_08325312.1| hypothetical protein HMPREF0491_00174 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412764|gb|EGG92147.1| hypothetical protein HMPREF0491_00174 [Lachnospiraceae oral taxon 107 str. F0167] Length = 661 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 168/662 (25%), Positives = 290/662 (43%), Gaps = 74/662 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I++IAAGE++ERP+ +KEL+ENS+DA SS + I GG +ITDNG G Sbjct: 2 INILDKGTIDKIAAGEVVERPASIVKELLENSIDAGSSSITVEIKNGGIDLIRITDNGCG 61 Query: 63 MTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+ A RH TSKI D +I + GFRGEAL SI AVS ++++ TG + Sbjct: 62 IDAKEVKKAFLRHATSKIISDKDLISIKSLGFRGEALSSIAAVSRCEMITKTRDELTGVR 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G + GT + +RD+F+ PAR FLK+ E I++++ +MA++ Sbjct: 122 YYMEGGVEVEYEEIGAPDGTSIIIRDIFYNTPARRKFLKTASTEGAHISELVEKMAMSNT 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F F + + + N NGN + I Q+ G++ ++ + + I + G P Sbjct: 182 GIAFKFISNNQIKLQTN---GNGNLKDIIYQLYGKEISKALCVIDYEKDGIKIGGVIARP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD---- 296 R N +F+NGR ++D I I + + + +YP L +I+ V+ Sbjct: 239 EVTRSTRNLENIFVNGRYIKDNIISKAIEDGFGDRLMQHQYPFCALSFDIEGVDVNVHPR 298 Query: 297 ------------VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK---- 340 N F+ + +R + K I+T + Sbjct: 299 KMEVRFSDRNIVYNAAKEAVEDIFKTQSAVREVPVGKNTSNEKKTFINTPEPFENRRRDI 358 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQEN----------RLSTNDLLPSDDPTYS 390 S +D+ + +PK + LF ++N R + + TY+ Sbjct: 359 SFSKPDKDDEIQWTVPKETSYNPQNDSVLFNEDNSKNIYFNNSIRQGEYADSKATEKTYT 418 Query: 391 EDNDPVEES--------------------------------------EATHYQLGIACAQ 412 + N+ + + + + Q Sbjct: 419 DINENISYTGIKTENNTENIKTTKEADIPTDVETSANKEKASQISFFDKESKKYIKVVGQ 478 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 + Y I Q + + I+DQHAAHE++++E++ ++ ++KIT+Q + P I+ L + E + Sbjct: 479 VFDTYWIVQLENDMYIIDQHAAHEKVMYERLLRESKNSKITAQMINPPIIVTLTDVEQDV 538 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + +H ++ G E FG I IP I +L +++ + + + Sbjct: 539 LNKHLDEFKNAGFDIEEFGGKEYKINSIPNIFPSIPKAELFNEMLSDSTNYDIISP-SEI 597 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 I A+MAC +I+ ++ +E N L E+ N C HGRPT IK+ +IEK F Sbjct: 598 ILAKTASMACKAAIKGNMRISLMEANELFDELLSLKNPYNCPHGRPTIIKMSKYEIEKKF 657 Query: 593 GR 594 R Sbjct: 658 KR 659 >gi|325851857|ref|ZP_08171022.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella denticola CRIS 18C-A] gi|327312556|ref|YP_004327993.1| DNA mismatch repair protein [Prevotella denticola F0289] gi|325484699|gb|EGC87612.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella denticola CRIS 18C-A] gi|326946300|gb|AEA22185.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella denticola F0289] Length = 617 Score = 461 bits (1187), Expect = e-127, Method: Composition-based stats. Identities = 166/617 (26%), Positives = 303/617 (49%), Gaps = 33/617 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ +KEL+EN++DAE+ + ++A G++ Q+ D+G G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELVENAIDAEAKHINVLVADAGRTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI DD ++HT GFRGEAL SI AV+ + L +R G Sbjct: 65 MSETDARLSFERHATSKIRKADDLFSLHTMGFRGEALASIAAVAQIELKTRMESEELGTH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++I+G + + P + G+ V +LFF +PAR FLKS E N I + R+ + +P Sbjct: 125 LSIAGSRFTGQEPCSCPVGSNFLVENLFFNVPARRKFLKSNTTELNNIINAFERIVLVWP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++FT + + + + N+ +RI ++ G+ + + ++ ++ + G+ G P Sbjct: 185 QIAFTLHSNGTELFSLRAC----NYRQRIVEIFGKRLNQDLLPIDVDTSLCRIHGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R A Y F+N R ++ + + TA+ IP G L E+ +DVN+H Sbjct: 241 ESARKKAPHQYFFVNERYMKHPYFHKAVLTAFDRLIPQGEQVPYFLYFEVPAENIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK------KMISSFHQDNAPKTH 354 P K+ I+F N I ++ ++++A+ + S + S + APK Sbjct: 301 PTKTEIKFENEQAIWQILLAAVKEAVGRFNDIPSIDFDTEGKPDIPVFSPNGETTAPKID 360 Query: 355 L--------PKYATSLTNTQEKLFL---QENRLSTNDLLPSDDPTYSEDNDPV------- 396 P + E+L+ E L D T + D++ + Sbjct: 361 FNPSYNPFRPTSRATAPKGWEELYPGPDAETETRQPQLFGQQDTTGTTDSETIVSSVATQ 420 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 +E+ + Q YI++ GL+I+DQH AH R+++E + + K SQ Sbjct: 421 PAAESMIEDQAPSHYQYKGCYIMTAVKSGLMIIDQHRAHIRILYEAYLRQLSEHKAHSQK 480 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 +L PE++ + + ++ +G + + G + A+ +PA + N+ L+ ++ Sbjct: 481 VLFPEMVQFAAADQLALDRILPEMAEMGFQLDSLGGGSYAVNGVPAGIEGLNVVTLINEM 540 Query: 517 IDEIIDSSTTYTLQDRIENILA-TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 + +DS T+ +++ I+ LA ++A +I G+ + + EM+ ++ E+ N + Sbjct: 541 VASAVDSGTS--VKEDIDRTLALSLARNAAIPQGQVLGNAEMDNIVNELFACTNVNYTPS 598 Query: 576 GRPTFIKLKLSDIEKLF 592 G P LK DIE LF Sbjct: 599 GEPVIAILKQQDIEHLF 615 >gi|332291112|ref|YP_004429721.1| DNA mismatch repair protein MutL [Krokinobacter diaphorus 4H-3-7-5] gi|332169198|gb|AEE18453.1| DNA mismatch repair protein MutL [Krokinobacter diaphorus 4H-3-7-5] Length = 624 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 160/625 (25%), Positives = 298/625 (47%), Gaps = 39/625 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KEL+EN++DA +S ++ ++ GK+ QI D+G G Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGASTIKLIVKDAGKTLIQIIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + M+ +RH TSKI +DD N++T GFRGEAL SI AV+H+ L +RP G + Sbjct: 65 MSDTDARMSFERHATSKITTADDLFNLNTKGFRGEALASIAAVAHVELKTRPEGAEVGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G KI++ A GT + V++LFF IPAR NFLKS VE + D +R+++A+P Sbjct: 125 IEIEGSKINAQEVCATPKGTSLSVKNLFFNIPARRNFLKSNSVELRHVIDEFQRVSLAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F + +++ GN +RI + G V + E+++ +T+ G+ P Sbjct: 185 DIAFAMYHNEGELFQLP----QGNLKQRIVAIFGGKTNEKLVPVQEETDILTIDGFVVKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F++ + + F+N R ++ ++ + A+ +P L L++DP +D+N+H Sbjct: 241 EFSKKTRGEQFFFVNDRFIKSAYLNHAVTAAFDGLLPERARASYFLYLKVDPSTIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK-------- 352 P K+ I+F + + + +I+ ++ + I+ ++ D K Sbjct: 301 PTKTEIKFDDEHALYAMLRSTIKHSLGQFSIAPVLDFNRDSELDTPYDYKNKGIVTPKIE 360 Query: 353 -----THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 A Q F + + ++ + + + E E + + Sbjct: 361 VDRTFNPFENVAPPKRGAQRPEFEKPSAAGWENMYEGMESQATAVSTMTFEKEVSTPNMF 420 Query: 408 I-------------------ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + Q++ YI+S G+VI+DQH AH+R+++E+ ++ Sbjct: 421 ESGLNGAKHSTPTSSSQNESSTYQLNNKYIVSTIKSGMVIIDQHRAHQRVLYEEFLRNIT 480 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + SQ LL P + E ALI E L G + + I IP +++ Sbjct: 481 VKESVSQQLLFPLTLAYSTTELALIEELKAGLENTGFIFGTISGDILEINGIPTSITESQ 540 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 +P ++ ++ ++ ++ + + + + +MA +++ G + S L+ + Sbjct: 541 VPVVIDQLLSDL-ENEVPDSGFSQTDTLAKSMAKSLAVKGGVSLDSASREHLVNSLFACK 599 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFG 593 S R TF+ + D+E+ F Sbjct: 600 EPSISPTNRKTFVTMTSEDLERKFK 624 >gi|222529488|ref|YP_002573370.1| DNA mismatch repair protein MutL [Caldicellulosiruptor bescii DSM 6725] gi|222456335|gb|ACM60597.1| DNA mismatch repair protein MutL [Caldicellulosiruptor bescii DSM 6725] Length = 589 Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats. Identities = 171/593 (28%), Positives = 298/593 (50%), Gaps = 14/593 (2%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 KL E++ + +AAGE++ERP+ +KEL+ENS+DA ++ ++ I GG ++ DNG G+ Sbjct: 6 KLPEQLTHILAAGEVVERPASCLKELLENSIDAGANLIDVKIEKGGMKRIEVYDNGKGIH 65 Query: 65 SEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 ++I +RH TSKI +D +I T GFRGEAL +I +VS +TL+S+ + G + Sbjct: 66 PDDIEYVFERHTTSKIKSFEDIFSIKTMGFRGEALCAISSVSKVTLVSKHLEEEQGCMVK 125 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + G K+ S GT + V D+F+ PARL FLKS E +V+ ++AIA+P++ Sbjct: 126 VEGGKVLSKSFCPFKEGTRIVVEDIFYNTPARLKFLKSPTTEQKYCLEVVEKIAIAWPEI 185 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 SF + F + I + G + + N VE + + + + GY PT Sbjct: 186 SFRAEADGKRQ---IFTPGDNKIESAIGSIFGIEIVKNLVEFSLEKESLKVWGYFVNPTV 242 Query: 243 NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPA 302 +R + ++ ++N R ++ K + S I A+ ++ GR+P+V L ++I P ++DVNVHP+ Sbjct: 243 SRATRSGYHFYVNRRYIKSKLLSSCIDEAFKNSVITGRFPIVFLFIQIPPSEIDVNVHPS 302 Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSL 362 K I+FR+ + N I ++I ++ + + + LSK + + A + + +L Sbjct: 303 KLEIKFRDERFVYNTIYKAITDSLKSEKMIPKADLSKANVG--NDAVAERKQTGVLSDNL 360 Query: 363 TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQT 422 N + ++ + + E YII Q Sbjct: 361 KNDISLVISEQPNFFGMFSRSEEIVIEQQGF------ENFDAGNYKIVGYAFDTYIIVQG 414 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 D L ++DQHA HER +FE + S+ + SQ L++P I+ + ++ + + Sbjct: 415 DDSLYLIDQHAVHERRLFEDFKSQIYSSNVQSQVLVSPVIVQIPSSRKEFVISNRAIFQK 474 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS-TTYTLQDRIENILATMA 541 +G + E FG N I +R PAIL++ L DII+ I + +L E++L +A Sbjct: 475 MGFEIEDFGKNEILVRTWPAILTENIEKMFLIDIIEMIYEQMVEDKSLVGISEDLLKRIA 534 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C +++ K+ +E ++ + C HGRP +++ +IEK+F R Sbjct: 535 CRAAVKGNSKISDLEKKEIVELVLIKKEIFHCPHGRPVVVEISKREIEKMFKR 587 >gi|86133303|ref|ZP_01051885.1| DNA mismatch repair protein MutL [Polaribacter sp. MED152] gi|85820166|gb|EAQ41313.1| DNA mismatch repair protein MutL [Polaribacter sp. MED152] Length = 604 Score = 461 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 156/604 (25%), Positives = 299/604 (49%), Gaps = 20/604 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KEL+EN++DA ++ ++ ++ GK+ Q+ D+G G Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATSIKLLLKDAGKTLIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M++ + M +RH TSKI ++D N+ T GFRGEAL SI A++H+ L ++ G Sbjct: 65 MSATDARMCFERHATSKIQKAEDLFNLCTKGFRGEALASIAAIAHVELKTKQENEELGTC 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I G + S ++ G + V++LF+ IPAR NFLKS+ VET + D +R+A+A+P Sbjct: 125 LKIEGSTVISQDFISTGKGASIAVKNLFYNIPARRNFLKSDTVETRHVIDEFQRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F + Y + N +RI V G V +NE+++ + ++G+ P Sbjct: 185 SIAFLLHHNNNEVYHLKS----SNLRQRIVAVFGAKMNEKLVPINEQTDILDIKGFVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + F+N R ++ ++ + A+ + G +P L L++ +D+N+H Sbjct: 241 EFAKRKRGEQFFFVNDRFIKSSYLNHAVVNAFDGLLEQGSHPSYFLYLKVPANTIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM--ISSFHQDNAP-KTHLPK 357 P K+ I+F N + + +++ ++ + ++ ++ +S+HQ+ + K+ PK Sbjct: 301 PTKTEIKFDNEKALYAMLRATVKHSLGQYNVAPVLDFNRDANLDTSYHQNVSSVKSSTPK 360 Query: 358 YATSLTNTQEK---------LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 + +E + + L S T E E Sbjct: 361 ITVDPDFNPFNEIKQKEIHFPYKREQKSQDWETLYSSVTTLDEQKQD-ELFTDQQEVKTQ 419 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 QI + Y++S G+V++ Q AH+R+++E+ + + SQ LL P I Sbjct: 420 KTFQIQRKYVMSLIKSGVVLIHQSLAHQRILYEEFLESITVKEANSQQLLFPVKISFSSA 479 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 E +I +L G + F +++ I+ IP +++ I +L +++++ ++ T Sbjct: 480 EIEMIYTIKSELENAGFSFDEFTKDSVTIKGIPVSVTESKITIILEELLND-MNLEVPDT 538 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 + + + A SI++G ++ E L+ + S G+ TF L L++I Sbjct: 539 SFSHFDIMAKSFAKTLSIKTGTQLAEKEQESLVNNLFSCKEPSISPFGKSTFKTLTLNEI 598 Query: 589 EKLF 592 + LF Sbjct: 599 DHLF 602 >gi|299142778|ref|ZP_07035907.1| DNA mismatch repair protein MutL [Prevotella oris C735] gi|298575807|gb|EFI47684.1| DNA mismatch repair protein MutL [Prevotella oris C735] Length = 611 Score = 461 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 167/611 (27%), Positives = 290/611 (47%), Gaps = 28/611 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ +KEL+EN++DA + ++ + GK+ Q+ D+G G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELVENAVDAGAKNIQVQVIDAGKTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI DD + T GFRGEAL SI AV+ + L +R ++ G Sbjct: 65 MSETDARLSFERHATSKIRKADDLFALRTMGFRGEALASIAAVAQVELKTRQEKDEIGTH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++I+G + P + + G + LF+ +PAR FLKS E N I R+A+ YP Sbjct: 125 LSIAGSRFVGQEPCSCSVGCSFSINSLFYNVPARRKFLKSNSTELNNIITAFERIALVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF+ + + + + G +RI + G+ + +N + + G+ G P Sbjct: 185 DISFSLHSNGTELFNLKA----GVLRQRIIDIFGKRLNQELLSVNVDTTMCRINGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y+F+NGR ++ + + A+ +P G L E+ P +DVN+H Sbjct: 241 QSARKKGAHQYLFVNGRYMKHPYFNKAVTAAFERLVPTGEQVPYFLYFEVAPEDIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS---KKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + ++++A+ S + I ++ + K Sbjct: 301 PTKTEIKFENEVPIWQILSAAVKEAVGMFNDIPSIDFDTEGRPDIPVYNPGESVTAPTLK 360 Query: 358 YATSLT---------------NTQEKLF-LQENRLSTNDLLPSDDPTYSEDNDPVEESEA 401 Y N ++L+ +++ S L S T E D ++ +E Sbjct: 361 YNPDYNPFHSSAGSSRSSSASNRWDELYQAAQHQPSQETELFSSKMTSPETTDELQSTEN 420 Query: 402 THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 + A Q YI++ GL+I+DQH AH R++F++ ++ + SQ +L PE Sbjct: 421 IIAEKSPAHYQYKGRYIMTAVKSGLMIIDQHRAHVRILFDRYQEQLKCREAASQKVLFPE 480 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 + E + + +L LG G ++ A++ IPA L + LL D+I Sbjct: 481 NVHFSASEEVTLTKIMPELQGLGFDFNAMGGSSYAVQAIPAGLEGLDFSSLLHDMIASAQ 540 Query: 522 DSSTTYTLQDRIENILA-TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + T ++D I + LA TMA +I G+ + + EM + + + N + G+ Sbjct: 541 EKPTA--IRDEISSALALTMARKAAIPQGQVLNNDEMENIFNMLFASSNPNYTPDGKNIL 598 Query: 581 IKLKLSDIEKL 591 LK ++IE L Sbjct: 599 CILKQNEIEHL 609 >gi|294672827|ref|YP_003573443.1| DNA mismatch repair protein MutL [Prevotella ruminicola 23] gi|294471669|gb|ADE81058.1| DNA mismatch repair protein MutL [Prevotella ruminicola 23] Length = 612 Score = 461 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 167/616 (27%), Positives = 288/616 (46%), Gaps = 32/616 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+ENS+DA + + ++ G++ Q+ D+G G Sbjct: 4 IHLLPDSVANQIAAGEVIQRPASVIKELVENSVDAGAKTIHVIVVDAGRTSIQVIDDGKG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + +A +RH TSKIS DD +HT GFRGEAL SI AV+ + L +R ++ G + Sbjct: 64 MSETDARLAFERHATSKISQADDLFALHTMGFRGEALASIAAVAQVELQTRRQEDEIGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++I+G K++ PV+ G+ +V +LFF +PAR FLK+ E N I R+ + YP Sbjct: 124 VSIAGSKVTRQEPVSCPVGSNFKVDNLFFNVPARRKFLKTNATELNNILTAFERIVLVYP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + FT + G+ +RI+ V G+ + + V + + T+ G+ G P Sbjct: 184 DIHFTLHNNGVEMLNLRA----GSVRQRIADVFGKQYNQDLVPVEVHTAMCTVSGFVGKP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY +P G L +E++P ++DVN+H Sbjct: 240 EAARKKTGCDYFFVNGRFMKHPYFHKAVMKAYDRLVPEGMAVPYFLYIEVEPGEIDVNIH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS----------------- 343 P K+ I+F N I + +++ I K S + Sbjct: 300 PTKTEIKFENEQAIWQILSAAVRDGIGKYCEVPSIDFDTQGQPDIPLFDSNSNTFQDSFA 359 Query: 344 ----SFHQDNAP-KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 +++ D P K ++S+ N E L+ + S + + ++N + Sbjct: 360 APKVNYNPDYNPFKQSGGSSSSSVPNQWESLYQGVEQGSFREEPVQQPSFFDDENVVAPQ 419 Query: 399 SEATH-YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 S + A Q Y+++ GL+I+DQH A R+++++ + I++Q + Sbjct: 420 SATEILSEKSPAHYQYKGKYLMTAVKSGLMIIDQHRASIRVLYDRYLNQHDGHVISTQKM 479 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L PE I E + + +L G G N A+ IPA L N LL D++ Sbjct: 480 LFPETITFSPSEGVTMQQLLPELTAYGFDLSDLGGNTYAVNGIPAGLEGINPQNLLHDML 539 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 +S +++ + +A +I G+ + + E+ ++ ++ N + G+ Sbjct: 540 S---STSAADSIEAIHTALALRLAQSAAIPYGQILTNDEIESIINDLFSCSNVNYTPDGK 596 Query: 578 PTFIKLKLSDIEKLFG 593 L DIE L G Sbjct: 597 AILCILPQGDIEHLLG 612 >gi|253567242|ref|ZP_04844692.1| DNA mismatch repair protein mutL [Bacteroides sp. 3_2_5] gi|265767840|ref|ZP_06095372.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_1_16] gi|251944073|gb|EES84592.1| DNA mismatch repair protein mutL [Bacteroides sp. 3_2_5] gi|263252512|gb|EEZ24040.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_1_16] gi|301164811|emb|CBW24371.1| putative DNA mismatch repair protein [Bacteroides fragilis 638R] Length = 625 Score = 461 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 172/626 (27%), Positives = 292/626 (46%), Gaps = 40/626 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DAE+ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQNIHVLVTDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIREASDLFALRTMGFRGEALASIAAVAQVELKTRPESEELGTK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I+G K+ S V+ G+ +++LFF IPAR FLK+ E + I R+A+ +P Sbjct: 125 IIIAGSKVESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTELSNILAEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + S + + +RI V G+ + + + + + GY P Sbjct: 185 EVAFSLYSNDSELFNLPACH----LRQRILSVFGKKLNQQLLSVEVNTTMVKVSGYVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + IP G + E+DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMDAYEQLIPAGEQISYFIYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + SI++++ K S I +F Q+ P Sbjct: 301 PTKTEIKFENEQAIWQILSASIKESLGKFNAVPSIDFDTEDMPDIPAFEQNLPPAPPKVH 360 Query: 358 YATSLTN-----------------TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES- 399 + + E L+ + S + SD SE+ +EE Sbjct: 361 FNSDFNPFKPSSSSGGGNYSRPKVDWEDLYGGLEKASKMNQPFSDSDPESEEFAVIEEES 420 Query: 400 ------------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 E + G Q +I++ GL+++DQH AH R++F++ R Sbjct: 421 IATAAPETLYAGEPAVIEKGTQHLQFKGRFILTSVKSGLMLIDQHRAHIRVLFDRYRAQI 480 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + SQ +L PEI+ L E A++ +DL +G G + AI +P+ + Sbjct: 481 QQKQGFSQGVLFPEILQLPASEAAVLQSIMDDLSAVGFDLSDLGGGSYAINGVPSGIDGL 540 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 N L+R ++ ++ ++ + + T+A +I G+ + + EM L+ + Sbjct: 541 NPVDLVRSMLHTAMEKGN-DVKEEIQDILALTLARAAAIVYGQVLSNEEMVSLVDNLFAC 599 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFG 593 P+ + GR +K +I+KLF Sbjct: 600 PSPNYTPDGRVVLTTIKEEEIDKLFR 625 >gi|312622278|ref|YP_004023891.1| DNA mismatch repair protein mutl [Caldicellulosiruptor kronotskyensis 2002] gi|312202745|gb|ADQ46072.1| DNA mismatch repair protein MutL [Caldicellulosiruptor kronotskyensis 2002] Length = 589 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 173/596 (29%), Positives = 300/596 (50%), Gaps = 20/596 (3%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 KL E++ + +AAGE++ERP+ +KEL+ENS+DA ++ ++ I GG ++ DNG G+ Sbjct: 6 KLPEQLTHILAAGEVVERPASCLKELLENSIDAGANLIDVKIEKGGMKRIEVYDNGKGIH 65 Query: 65 SEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 +++ +RH TSKI +D +I T GFRGEAL +I +VS +TL+S+ + G + Sbjct: 66 PDDMEYVFERHTTSKIKSFEDIFSIKTMGFRGEALCAISSVSKVTLVSKHLEEERGCMVK 125 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + G K+ S GT + V D+F+ PARL FLKS E +V+ ++AIA+P++ Sbjct: 126 VEGGKVLSKSFCPFKEGTRIVVEDIFYNTPARLKFLKSPTTEQKYCLEVVEKIAIAWPEI 185 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 SF + F + I + G + + N VE + + + + GY PT Sbjct: 186 SFRAEADGKRQ---IFTPGDNKIESAIGSIFGIEIVKNLVEFSLEKESLKVWGYFVNPTV 242 Query: 243 NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPA 302 +R + ++ ++N R ++ K + S I A+ ++ GR+P+V L ++I P ++DVNVHP+ Sbjct: 243 SRATRSGYHFYVNRRYIKSKLLSSCIDEAFKNSVITGRFPIVFLFIQIPPSEIDVNVHPS 302 Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSL 362 K I+FR+ + N I ++I ++ + + + LSK + + A + + +L Sbjct: 303 KLEIKFRDERFVYNTIYKAITDSLKSEKMIPKADLSKTNVG--NDAVAERKQAGVLSDNL 360 Query: 363 TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES---EATHYQLGIACAQIHQNYII 419 N + ++ +S + V E E YII Sbjct: 361 KNNISLVISEQPNF---------FRIFSRREEIVIEQQGFENFDAGNYKIVGYAFDTYII 411 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 Q D L ++DQHA HER +FE + S+ + SQ L +P I+ + ++ + Sbjct: 412 VQGDDSLYLIDQHAVHERRLFEDFKSQIYSSNVQSQVLASPVIVQIPSSRKEFVISNQAI 471 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS-TTYTLQDRIENILA 538 ++G + E FG N I +R PAIL++ L DII+ I + +L E++L Sbjct: 472 FQKMGFEIEDFGKNEILVRTWPAILTENIEKMFLIDIIEMIYEQMVEDKSLVGISEDLLK 531 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC +++ K+ +E ++ + C HGRP +++ +IEK+F R Sbjct: 532 RIACRAAVKGNSKISDLEKKEIVELVLIKKEIFHCPHGRPVVVEISKREIEKMFKR 587 >gi|120435154|ref|YP_860840.1| DNA mismatch repair protein MutL [Gramella forsetii KT0803] gi|167017342|sp|A0LZH8|MUTL_GRAFK RecName: Full=DNA mismatch repair protein mutL gi|117577304|emb|CAL65773.1| DNA mismatch repair protein MutL [Gramella forsetii KT0803] Length = 617 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 158/617 (25%), Positives = 303/617 (49%), Gaps = 32/617 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ IKEL+ENS+DA++SR++ VI GK+ QI D+G G Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVIKELLENSIDAKASRIQVVIKDAGKTLIQIVDDGIG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + M+ +RH TSKI +DD ++ T GFRGEAL SI A++H+ L ++ + G Sbjct: 65 MSLTDARMSFERHATSKIKLADDLFSLKTKGFRGEALASIAAIAHVELRTKTENDEVGTC 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G ++ S GT + V++LF+ IPAR NFLKS+ VET I D +R+A+A+P Sbjct: 125 LKVEGSEVVSQDAFVTPKGTSISVKNLFYNIPARRNFLKSDNVETRHIIDEFQRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF+ + +++ NF +RI+ ++G V + E + + G+ G P Sbjct: 185 NISFSLLHNGNELFQLPIT----NFRQRITNILGGKTNEKLVPVEEDTEIAKISGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + + F+N R ++ ++ + ++ + YP L LE+DP+ +D+N+H Sbjct: 241 EFAKKSRGEQFFFVNDRFIKSPYLNHAVTASFEGLLKDKSYPSYFLYLEVDPKSIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK-------- 352 P K+ I+F + + + SI+ ++ + ++ + D K Sbjct: 301 PTKTEIKFDDEHALYAILKSSIKHSLGQFNVAPILDFERDSELDTPYDYKNKEADAPQVE 360 Query: 353 -----THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE------- 400 +S T ++++ + + + S + ++ + + E Sbjct: 361 VDRNFNPFQNEGSSKTQFSGGTNFRKDKPAEWESIYSGMQSETDTDIDIRHIEFESEEVT 420 Query: 401 -----ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 A Q + Q+ + YI+S G++++DQH AH R+++E++ ++ + SQ Sbjct: 421 GNLFGAREEQTEKSTFQVQKKYIVSTLKSGILVIDQHRAHTRVLYEELLKNITVSSAVSQ 480 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P ++ E ++ E + L + G + I IP ++S+ + LL Sbjct: 481 QLLFPLLLQFNSHEVEMLKEIKDSLEQTGFVFSSIKKEEVEISGIPTLISESEVEILLEQ 540 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 +I + + + + + ++A ++RSG + S E ++ + + Sbjct: 541 LIADF-EKDVPDNGFSQTDLLAKSLANSMAVRSGTLLNSAEQQHIVNRLFACKEPALSPF 599 Query: 576 GRPTFIKLKLSDIEKLF 592 + F L + +++K F Sbjct: 600 NKTVFTTLSVDELDKKF 616 >gi|53715353|ref|YP_101345.1| DNA mismatch repair protein MutL [Bacteroides fragilis YCH46] gi|60683322|ref|YP_213466.1| putative DNA mismatch repair protein [Bacteroides fragilis NCTC 9343] gi|81313626|sp|Q5L8M5|MUTL_BACFN RecName: Full=DNA mismatch repair protein mutL gi|81824910|sp|Q64NX1|MUTL_BACFR RecName: Full=DNA mismatch repair protein mutL gi|52218218|dbj|BAD50811.1| DNA mismatch repair protein MutL [Bacteroides fragilis YCH46] gi|60494756|emb|CAH09562.1| putative DNA mismatch repair protein [Bacteroides fragilis NCTC 9343] Length = 625 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 172/626 (27%), Positives = 292/626 (46%), Gaps = 40/626 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DAE+ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQNIHVLVTDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIREASDLFALRTMGFRGEALASIAAVAQVELKTRPESEELGTK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I+G K+ S V+ G+ +++LFF IPAR FLK+ E + I R+A+ +P Sbjct: 125 IIIAGSKVESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTELSNILAEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + S + + +RI V G+ + + + + + GY P Sbjct: 185 EVAFSLYSNDSELFNLPACH----LRQRILSVFGKKLNQQLLSVEVNTTMVKVSGYVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + IP G + E+DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMDAYEQLIPAGEQISYFIYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + SI++++ K S I +F Q+ P Sbjct: 301 PTKTEIKFENEQAIWQILSASIKESLGKFNAVPSIDFDTEDMPDIPAFEQNLPPAPPKVH 360 Query: 358 YATSLTN-----------------TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES- 399 + + E L+ + S + SD SE+ +EE Sbjct: 361 FNSDFNPFKPSSSSGGGNYSRPKVDWEDLYGGLEKASKMNQPFSDSDPESEEFAVIEEES 420 Query: 400 ------------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 E + G Q +I++ GL+++DQH AH R++F++ R Sbjct: 421 IATAAPETLYAGELAVIEKGTQHLQFKGRFILTSVKSGLMLIDQHRAHIRVLFDRYRAQI 480 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + SQ +L PEI+ L E A++ +DL +G G + AI +P+ + Sbjct: 481 QQKQGFSQGVLFPEILQLPASEAAVLQSIMDDLSAVGFDLSDLGGGSYAINGVPSGIDGL 540 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 N L+R ++ ++ ++ + + T+A +I G+ + + EM L+ + Sbjct: 541 NPVDLVRSMLHTAMEKGN-DVKEEIQDILALTLARAAAIVYGQVLSNEEMVSLVDNLFAC 599 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFG 593 P+ + GR +K +I+KLF Sbjct: 600 PSPNYTPDGRVVLTTIKEEEIDKLFR 625 >gi|206602340|gb|EDZ38821.1| DNA mismatch repair protein MutL [Leptospirillum sp. Group II '5-way CG'] Length = 634 Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 172/634 (27%), Positives = 295/634 (46%), Gaps = 44/634 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L + +++QIAAGE+IERP+ +KEL+ENSLDA S ++ I GG+ ++DNG Sbjct: 3 RIHELPKIVVDQIAAGEVIERPASVVKELVENSLDAGSGKISVYIEEGGRKSIIVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A +RH TSKI DD T GFRGEAL SI +VSH+ L SR TG Sbjct: 63 GIYPDDVDLAFRRHATSKIQSVDDLLRARTLGFRGEALSSISSVSHVRLRSRTRDLETGV 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++S + + +PGT +EVRDLF +P RL FLKS E + I + I +A+ + Sbjct: 123 EYSVSPGQEGILADWTGSPGTTIEVRDLFHNLPVRLKFLKSASTEQSQIQETITLLALGH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V F S ++ + + V+ E ++ +V + I ++ Sbjct: 183 PEVQFHLSVNGRTTLALSSREDRLLRLLDLYPVLEEKDLSRSV---LEGEGIRVEALVLT 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P NR + VF+N R ++ +L I A I +P + +E+ P +VDVNV Sbjct: 240 PDKNRKDRKYQNVFLNRRWIRHPGLLQAISQGAAGRIHKDVHPGAWVWIEMIPDKVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKK---------------------------GIS 332 HP K +RF + + + + + + ++ GI+ Sbjct: 300 HPTKKEVRFLETDRLFSLVRRVVSEGLDSFLNGSRTDPKKTFGEAPPDMRVSSGIFPGIA 359 Query: 333 TSSVLSKKMISSFHQ---DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + S L + + + P E+ +L+ + S + P + Sbjct: 360 SDSPLDRSSFRPEPPSGGERGQRRESPPGKVDRAPDPERPYLRTSAPSAREKRVVHHPEF 419 Query: 390 SEDNDPVEE---------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 + ++ E Q + +I++ LVI+DQH AHER+ + Sbjct: 420 QNLPELLKSLPPPPFSFRQENLEDLEIRILTQTYGTFILAFLGQELVIIDQHTAHERIRY 479 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 + R+ K++ L P+ + L E + E ++L LG + GP ++ + I Sbjct: 480 DSFRKGLEQGKMSMLPYLFPQTVRLTAREVENLEERVDELAHLGFDVDVQGPESVRVSGI 539 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 PA+L ++ LL+++ + + DRI+ L T++C+ SIR+ + ++ RL Sbjct: 540 PALLEGEDPASLLQELSESSQGFAFPLVRSDRIDETLMTLSCHTSIRANHSLGKEDLGRL 599 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +R + + C HGRPT + L + +EK F R Sbjct: 600 VRMLLRTEYPFSCPHGRPTVLSLSPNVLEKWFHR 633 >gi|187932933|ref|YP_001886011.1| DNA mismatch repair protein [Clostridium botulinum B str. Eklund 17B] gi|238691603|sp|B2TIB8|MUTL_CLOBB RecName: Full=DNA mismatch repair protein mutL gi|187721086|gb|ACD22307.1| DNA mismatch repair protein MutL [Clostridium botulinum B str. Eklund 17B] Length = 672 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 182/672 (27%), Positives = 307/672 (45%), Gaps = 83/672 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L+E N+IAAGE++ERP+ +KEL+EN++DA S + I GG S +I D+G Sbjct: 3 RINILNEDTANKIAAGEVVERPASVVKELVENAIDANSKNILIEIEEGGSSLIRIIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+I A H TSKI S+D +I+T GFRGEALPSI +V+ + L ++ G Sbjct: 63 GIYKEDIEKAFLPHATSKIKESEDIYSINTLGFRGEALPSIASVARVNLKTKQETEECGY 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G K S V +N GTI+EVRDLFF +PAR FLK+ E++LI D+I R+A++ Sbjct: 123 EITIEGGKFSEVTECGVNKGTIMEVRDLFFNVPARKKFLKTTSKESSLINDIITRIALSN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF K+ NGN + I + G+ + N + + S+ T+ GY G Sbjct: 183 PNISFKLFNNGK---KIIHTYGNGNMKDVIRTIYGKSIVENVLYFEDTSDIATIYGYVGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV---------VLLLEI 290 RG+ N +F+N R ++++ + + A+ + ++P + + I Sbjct: 240 EAIARGSRNNQSIFVNSRYIKNRSLGIAVEQAFKSFSTVSKFPFFILFIEIYPEYIDVNI 299 Query: 291 DP--RQVDVN------------VHPAKSYIRFRN---PTIIRNFI--------------- 318 P +V N VH + F P + I Sbjct: 300 HPTKSEVKFNDERFIFKKIFGAVHTSLKEEVFSTFSIPEEVNEAISKNTNLNIEEITFKI 359 Query: 319 ------IQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---KYATSLTNTQEKL 369 ++ +++K I ++ + + + + T++P L + KL Sbjct: 360 EEEQEKVKFNTNHLSQKNICSTQGNNSINKHIYDEKHKTDTNIPLNVNIPVDLKSDHIKL 419 Query: 370 FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG---------------------- 407 N + +++ ++ E + + ++ + Sbjct: 420 EDDNNSIPNKEVICDNNEVKYESSYTSDSNQYENSCKSDVDKESKSKTTGTSELVKEKIP 479 Query: 408 -----IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 Q ++ YI+ + L ++DQHAAHE+++FEK D I Q L+ P + Sbjct: 480 KFPAIKIIGQYNKTYILGEYAGTLYMIDQHAAHEKIMFEKYLNDIICGDIIIQPLMIPTV 539 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 IDL + + E+ + G E FG +IA++E+P L K L +I+D + + Sbjct: 540 IDLSMDDYSYFEENKDVFKEAGFTIEDFGGTSIALKEVPYFLGKLKPKNLFLEILDNLKN 599 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 + T + + I AT AC +++ + +EM +L+ E+ + C HGRPT I+ Sbjct: 600 LGSGKTTEVKYNAI-ATKACKSAVKGNDSLDELEMVKLIEELRYIDDPFHCPHGRPTIIQ 658 Query: 583 LKLSDIEKLFGR 594 +DI+K F R Sbjct: 659 FTSTDIDKKFRR 670 >gi|319954280|ref|YP_004165547.1| DNA mismatch repair protein mutl [Cellulophaga algicola DSM 14237] gi|319422940|gb|ADV50049.1| DNA mismatch repair protein MutL [Cellulophaga algicola DSM 14237] Length = 617 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 161/617 (26%), Positives = 295/617 (47%), Gaps = 32/617 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KEL+EN++DA + ++ +I GGK+ Q+ DNG G Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGADAIKLIIKDGGKALIQVVDNGVG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M++ + ++ +RH TSKI +DD +HT GFRGEAL SI A++H+ L++R + G Q Sbjct: 65 MSATDARLSFERHATSKIKSADDLFCLHTKGFRGEALASIAAIAHVELLTRTATDEIGVQ 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G KISS P GT V++LFF IPAR NFLKS QVE ITD R+A+A+P Sbjct: 125 LKVEGSKISSQEPTVTPKGTSFCVKNLFFNIPARRNFLKSNQVEFRHITDEFHRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F F S + + N+ +RI V G V + E++ + + G+ P Sbjct: 185 DIQFHFYNNGSEIFHLP----KSNYRQRIVNVFGAKTNEKLVPVEEETQVVKISGFISKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F++ + + + F+N R ++ ++ + +A+ I +P L L++DP +D+N+H Sbjct: 241 EFSKKSRGEQFFFVNNRFIKSPYLHHAVVSAFEGLIKSENHPGYFLYLDVDPASIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------- 341 P K+ I+F + + + +I+ A+ + + + Sbjct: 301 PTKTEIKFDDEHTVYALLRSAIKHALGQFNVVPALDFEADQNLETPYNYKAKLAEVPRVS 360 Query: 342 ----ISSFHQDNAPKTH-LPKYATSLTNTQEKLFLQ-ENRLSTNDLLPSDDPTYSEDNDP 395 + F D +H Y E +++ E+++ S Sbjct: 361 VDASFNPFADDTPKASHRASNYEKPSAKGWENMYVGLESKVGKEADFSSVSFESETITGS 420 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 + ++ Q+ + YI++ G++I+DQ AH+R+++E ++ + SQ Sbjct: 421 IFDTGTETIDSVSTTFQLKRKYIVTTIKSGMIIIDQSRAHQRVLYENFLKNITIKEGVSQ 480 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P ++ E +I E + L LG + + I +P ++ + + +L Sbjct: 481 QLLFPLQLNFSITEVNIIKEIIDSLINLGFAFDAIDEENVLISGVPLLVPESEVGMVLDQ 540 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 +I + T + + + T++ ++++G ++ S L+ + Sbjct: 541 LISDY-QMDTPEDSFSQSDIVAKTLSKTLAVKTGEQLDSESQLALVNNLFACKEFKISPF 599 Query: 576 GRPTFIKLKLSDIEKLF 592 +P +I L DI+K F Sbjct: 600 NKPIYITLTGEDIDKKF 616 >gi|312793676|ref|YP_004026599.1| DNA mismatch repair protein mutl [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180816|gb|ADQ40986.1| DNA mismatch repair protein MutL [Caldicellulosiruptor kristjanssonii 177R1B] Length = 588 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 169/593 (28%), Positives = 296/593 (49%), Gaps = 15/593 (2%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 KL E I + +AAGE++ERP+ +KEL+ENS+DA +S ++ I GG ++ DNG G+ Sbjct: 6 KLPESITHILAAGEVVERPASCLKELLENSIDAGASLIDVKIEKGGMKRIEVYDNGKGIH 65 Query: 65 SEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 ++I +RH TSKI +D +I T GFRGEAL +I +V+ +TL+S+ + G + Sbjct: 66 PDDIEYVFERHTTSKIKSFEDIFSIKTMGFRGEALCAISSVAKVTLVSKHLEEEQGCMVK 125 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + G K+ S GT + V D+F+ PARL FLKS E +V+ ++AIA+P++ Sbjct: 126 VEGGKVLSKSFCPFKEGTRIIVEDIFYNTPARLKFLKSPSTEQKYCLEVVEKIAIAWPEI 185 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 SF + F + I + G + + N VE + + + + GY PT Sbjct: 186 SFRAEADGKRQ---IFTPGDNKIESVIGSIFGIEIVKNLVEFSLEKESLKVWGYFVNPTV 242 Query: 243 NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPA 302 +R + ++ ++N R ++ K + S I A+ ++ GR+P+V L ++I P ++DVNVHP+ Sbjct: 243 SRATRSGYHFYVNRRYIKSKLLSSCIDEAFKNSVITGRFPIVFLFVQIPPSEIDVNVHPS 302 Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSL 362 K ++FR+ + N I ++I ++ + + + L K + + T + ++ Sbjct: 303 KLEVKFRDERFVYNTIYKAIADSLKSEKMIPKADLGKANDGNDAERERKYTEILSANSND 362 Query: 363 TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQT 422 + +S +E + E YII Q+ Sbjct: 363 ISL---------VISEQPNFFEMFSKGAEVVIEQQSFENFDAGNYKIVGYAFDTYIIVQS 413 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 D L ++DQHA HER +FE + S+ + SQ L +P ++ L + ++ + + Sbjct: 414 NDSLYLIDQHAVHERRLFEDFKSQVYSSNVQSQVLASPVVVRLPSSQKEFVISNASVFQK 473 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS-TTYTLQDRIENILATMA 541 +G + E FG N I +R PA+LS L D+I+ I + +L + E++L +A Sbjct: 474 IGFEIEDFGKNEIVVRTWPALLSSNIDTIFLLDVIEMIYEQMVENKSLVEISEDLLKRIA 533 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C +++ K+ +E ++ + C HGRP +++ +IEK+F R Sbjct: 534 CRAAVKGNSKISDLEKKEIVELVLIKKEIFHCPHGRPVVVEISKREIEKMFKR 586 >gi|189461631|ref|ZP_03010416.1| hypothetical protein BACCOP_02290 [Bacteroides coprocola DSM 17136] gi|189431661|gb|EDV00646.1| hypothetical protein BACCOP_02290 [Bacteroides coprocola DSM 17136] Length = 628 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 169/634 (26%), Positives = 284/634 (44%), Gaps = 53/634 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + NQIAAGE+I+RP+ +KEL+EN++DA + ++ +I GK+ Q+ D+G G Sbjct: 5 IRLLPDSVANQIAAGEVIQRPASVVKELVENAIDAGAHHIDVLITDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + +A +RH TSKI D +HT GFRGEAL SI AV+ + L + G + Sbjct: 65 MSETDARLAFERHATSKIRQAADLFALHTMGFRGEALASIAAVAQVELRTCQEGEQLGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ISG K+ S VA G+ V++LFF IPAR FLKS Q E + I R+A+ P Sbjct: 125 ICISGSKVESQEAVACPHGSNFSVKNLFFNIPARRKFLKSNQTELSNILTEFERIALVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +VSFT + + +RI V G+ + + L+ +++ + + G+ G P Sbjct: 185 EVSFTLHHNDTEMLNLPAI----QLRQRIMGVFGKKLNQDLLSLDIETSMVKIHGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + F+NGR ++ + + AY IP+G + ++DP +DVN+H Sbjct: 241 ETARKKGARQFFFVNGRYMRHPYFHKAVVDAYENLIPVGEQVSYFIYFDVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ-DNAPKTHLPKYA 359 P K+ I+F N I + ++++ + + S + + D AP + + + Sbjct: 301 PTKTEIKFENEQPIWQILSAAVKETLGRFNAVPSIDFDTEGMPDIPAFDAAPVSGVRPPS 360 Query: 360 TSLTNTQEKLFLQE-----------------------------------NRLSTNDLLPS 384 TS + + D S Sbjct: 361 TSYDPSYNPFNVSSVPPSQYSPSSYQKQHVEWEPLFQGLEKKGSSSWDMPASPIPDETWS 420 Query: 385 DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 + E E +E + Q +YI++ GL+I+DQ AH R+++++ Sbjct: 421 EPEQQPEPMLYDEHAEGAIAEKSAQHYQYKGSYILTSVKSGLMIIDQQRAHIRILYDQYM 480 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 + + SQ +L P+++ E ++ E +DL LG + G + AI IPA + Sbjct: 481 NQIANRRNVSQRMLFPDMVHFSPAEIPVLEEIMDDLTALGFELSNLGGGSYAINGIPAGI 540 Query: 505 SKKNIPQLLRDIIDEIIDSS-----TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 N L+ +++ I+ ++ A I G+ + + EMN Sbjct: 541 EGLNPETLVTNMVQTAIEKGCKVKEEVQSMLALSLAKAAA------IVPGQVLTNEEMNN 594 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 L+ E+ + G+ LK D+EKLF Sbjct: 595 LVDELFAVSTPNYTPDGKVVLSVLKEDDLEKLFK 628 >gi|312875822|ref|ZP_07735812.1| DNA mismatch repair protein MutL [Caldicellulosiruptor lactoaceticus 6A] gi|311797303|gb|EFR13642.1| DNA mismatch repair protein MutL [Caldicellulosiruptor lactoaceticus 6A] Length = 588 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 169/593 (28%), Positives = 296/593 (49%), Gaps = 15/593 (2%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 KL E I + +AAGE++ERP+ +KEL+ENS+DA +S ++ I GG ++ DNG G+ Sbjct: 6 KLPESITHILAAGEVVERPASCLKELLENSIDAGASLIDVKIEKGGMKRIEVYDNGKGIH 65 Query: 65 SEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 ++I +RH TSKI +D +I T GFRGEAL +I +V+ +TL+S+ + G + Sbjct: 66 PDDIEYVFERHTTSKIKSFEDIFSIKTMGFRGEALCAISSVAKVTLVSKHLEEEQGCMVK 125 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + G K+ S GT + V D+F+ PARL FLKS E +V+ ++AIA+P++ Sbjct: 126 VEGGKVLSKSFCPFKEGTRIIVEDIFYNTPARLKFLKSPSTEQKYCLEVVEKIAIAWPEI 185 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 SF + F + I + G + + N VE + + + + GY PT Sbjct: 186 SFRAEADGKRQ---IFTPGDNKIESVIGSIFGIEIVKNLVEFSLEKESLKVWGYFVNPTV 242 Query: 243 NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPA 302 +R + ++ ++N R ++ K + S I A+ ++ GR+P+V L ++I P ++DVNVHP+ Sbjct: 243 SRATRSGYHFYVNRRYIKSKLLSSCIDEAFKNSVITGRFPIVFLFVQIPPSEIDVNVHPS 302 Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSL 362 K ++FR+ + N I ++I ++ + + + L K + + T + ++ Sbjct: 303 KLEVKFRDERFVYNTIYKAIADSLKSEKMIPKADLGKANDGNDAERERKYTEILSANSND 362 Query: 363 TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQT 422 + +S +E + E YII Q+ Sbjct: 363 ISL---------VISEQPNFFEIFSKGAEVVIEQQSFENFDAGNYKIVGYAFDTYIIVQS 413 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 D L ++DQHA HER +FE + S+ + SQ L +P ++ L + ++ + + Sbjct: 414 DDSLYLIDQHAVHERRLFEDFKSQVYSSNVQSQVLASPVVVRLPSSQKEFVISNASVFQK 473 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS-TTYTLQDRIENILATMA 541 +G + E FG N I +R PA+LS L D+I+ I + +L + E++L +A Sbjct: 474 IGFEIEDFGKNEIVVRTWPALLSSNIDTIFLLDVIEMIYEQMVENKSLVEISEDLLKRIA 533 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C +++ K+ +E ++ + C HGRP +++ +IEK+F R Sbjct: 534 CRAAVKGNSKISDLEKKEIVELVLIKKEIFHCPHGRPVVVEISKREIEKMFKR 586 >gi|150025219|ref|YP_001296045.1| DNA mismatch repair protein MutL [Flavobacterium psychrophilum JIP02/86] gi|167017341|sp|A6GYR1|MUTL_FLAPJ RecName: Full=DNA mismatch repair protein mutL gi|149771760|emb|CAL43234.1| DNA mismatch repair protein MutL [Flavobacterium psychrophilum JIP02/86] Length = 613 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 166/619 (26%), Positives = 295/619 (47%), Gaps = 41/619 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KEL+EN++DA +S ++ + GK Q+ DNG G Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGASDIKLICKEAGKVLIQVIDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + + +RH TSKI +D ++HT GFRGEAL SI A++H+ + ++ Q G Sbjct: 65 MSVTDARLCFERHATSKIRQAEDLFDLHTKGFRGEALASIAAIAHVEMKTKQDQEELGTH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G K S + GT V++LFF IPAR NFLKS+ VE I D +R+A+A+ Sbjct: 125 IIIEGSKFVSQDVAVLPKGTSFLVKNLFFNIPARRNFLKSDIVELRHIIDEFQRVALAHH 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + FTF S + + N +RI + V + E ++ +++QG+ G P Sbjct: 185 NIHFTFYHNGSELFNLP----QSNVRQRIVNIFSGKTNEKLVPIQENTDILSIQGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + + F+N R ++ ++ I AY + G P L L++ P +D+N+H Sbjct: 241 EFAKKSKGEQFFFVNDRFIKSGYLHHAIMNAYEGLLRDGAQPSYFLYLDVPPHTIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK-------------------- 340 P K+ I+F + + + + + ++ + ++ + Sbjct: 301 PTKTEIKFDDEQALYAILRSATKHSLGQFNVAPVLDFERDFNLDTPYSYQNKEAETPTIQ 360 Query: 341 ---MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 + F ++ K T E L++ + S DL + + + Sbjct: 361 VDSNFNPFQEEKKQSNFSYKPKTEKQPHWESLYVGLDTKSI-DLDEMSFESETVTSSLFS 419 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 +SE QIH+ YI++ G++I+DQ AH+R+++E+ + + SQ L Sbjct: 420 DSEVEKAPTTTY--QIHKKYIVNPIKSGMLIIDQQRAHQRILYEQFLTNITIHQANSQQL 477 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI----PQLL 513 L P + E ALI E + L G E ++I I +P +S+ QL+ Sbjct: 478 LFPVTLYFSGNEMALIQEIKQSLESTGFVFEALNKDSIVISGLPVTVSESEASIVLEQLV 537 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 D+ E+ DSS + ++++ +MA ++++G + L+ + ++ Sbjct: 538 SDLQQEVPDSSFSQ-----MDSMAKSMAKSLAVKTGTYLTEEAQVNLVNNLFACKEATVS 592 Query: 574 NHGRPTFIKLKLSDIEKLF 592 + TFI L + D++K F Sbjct: 593 PFNKTTFITLSVEDLDKKF 611 >gi|258405211|ref|YP_003197953.1| DNA mismatch repair protein MutL [Desulfohalobium retbaense DSM 5692] gi|257797438|gb|ACV68375.1| DNA mismatch repair protein MutL [Desulfohalobium retbaense DSM 5692] Length = 582 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 191/595 (32%), Positives = 306/595 (51%), Gaps = 20/595 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L + NQIAAGE++ERP+ KELIENSLDA ++R+E + GG+ Q+ DNG Sbjct: 4 PIRVLPPVLQNQIAAGEVVERPANVAKELIENSLDAGATRIEINLENGGQGLIQVQDNGH 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+IP+A+ RH TSKI +D I + GFRGEALPSI +VS L+ S P G Sbjct: 64 GLAAEDIPLALTRHATSKIQGIEDLVRIASLGFRGEALPSIASVSRLSFASAPAGVEAGH 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ++ +++S PVA+ GT ++VRDLF PARL FLK++ ET + + ++A+A+ Sbjct: 124 EVEVAFGEMASEGPVALQTGTRIQVRDLFSNTPARLKFLKTQATETRRCQETVFKIALAH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 FT S N+ + + P+R++ V + I+ + L + + + ++G G Sbjct: 184 LDKEFTLSIQGRNQLHLV---KHQALPQRLAAVWPQQVIDGLLPLQGERHGLQVEGVIGS 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +G A + + FINGR VQDK +L +R Y + YP VL L + +VD+NV Sbjct: 241 PRTAQGRAQRIHFFINGRPVQDKILLKALREGYKGALLSKEYPQAVLFLTLPLEEVDINV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAKS +RFR+ + + +++ A+ K S + + S Q AP+ PK+ Sbjct: 301 HPAKSEVRFRDERSVAGLVCTTVRNALEKCDPSQAVLGEAPATQSSVQ--APQAAAPKFG 358 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 T E + S + +E + ES + Q+ Y++ Sbjct: 359 T-FHEYLESADAPSPQTRARYTSSSPNTPQTETAPQIRESGPASREPAY-LGQVASTYLL 416 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 GL++VDQHAAHER++F +RQ + + Q L P + L GE + Sbjct: 417 VDDGQGLLLVDQHAAHERILFNALRQQHD--GVEQQLLALPLELALQPGERERFQDVALQ 474 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L ++G + ++++ IPA L+ LLRDI+ + ++++ Sbjct: 475 LRQMGFSCSLVESSLLSVQAIPASLATDQARALLRDIL---------GGKERSVDDMRVV 525 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC +I++G + E LL+ E++ C HGRP ++ D+E+LF R Sbjct: 526 LACRIAIKAGDPLSRDEALHLLQAWEQSQERFYCPHGRPVAVRFGPGDLERLFKR 580 >gi|281423981|ref|ZP_06254894.1| DNA mismatch repair protein MutL [Prevotella oris F0302] gi|281401906|gb|EFB32737.1| DNA mismatch repair protein MutL [Prevotella oris F0302] Length = 611 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 165/610 (27%), Positives = 285/610 (46%), Gaps = 26/610 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ +KEL+EN++DA + ++ + GK+ Q+ D+G G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELVENAVDAGAKNIQVQVIDAGKTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI DD +HT GFRGEAL SI AV+ + L +R ++ G Sbjct: 65 MSETDARLSFERHATSKIRKADDLFALHTMGFRGEALASIAAVAQVELKTRQEKDEIGTH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++I+G + P + + G + LF+ +PAR FLKS E N I R+A+ YP Sbjct: 125 LSIAGSRFVGQEPCSCSVGCSFSINSLFYNVPARRKFLKSNSTELNNIITAFERIALVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF+ + + + + G +RI + G+ + +N + + G+ G P Sbjct: 185 DISFSLHSNGTELFNLKA----GVLRQRIIDIFGKRLNQELLSVNVDTTMCRINGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y+F+NGR ++ + + A+ +P G L E+ P +DVN+H Sbjct: 241 QSARKKGAHQYLFVNGRYMKHPYFNKAVTAAFERLVPAGEQVPYFLYFEVAPEDIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS---KKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + ++++A+ S + I ++ + K Sbjct: 301 PTKTEIKFENEVPIWQILSAAVKEAVGMFNDIPSIDFDTEGRPDIPVYNPGESVTAPTLK 360 Query: 358 YATSLT---------------NTQEKLF-LQENRLSTNDLLPSDDPTYSEDNDPVEESEA 401 Y N ++L+ +++ S L S T E D + +E Sbjct: 361 YNPDYNPFRSSAGSSRSSSASNRWDELYQAAQHQPSQETELFSSKMTSPETTDEPQSAEN 420 Query: 402 THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 + A Q YI++ GL+I+DQH AH R++F++ ++ + SQ +L PE Sbjct: 421 VIAEKSPAHYQYKGRYIMTAVKSGLMIIDQHRAHVRILFDRYQEQLKCREAASQKVLFPE 480 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 + E + + +L LG G ++ A++ IPA L + LL D+I Sbjct: 481 NVHFSASEEVTLTKIMPELQGLGFDFNAMGGSSYAVQAIPAGLEGLDFSSLLHDMIASAQ 540 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 + T L + + TMA +I G+ + + EM + + + N + G+ Sbjct: 541 EKPTA-ILDEISSALALTMARKAAIPQGQVLNNDEMENIFNMLFASSNPNYTPDGKNILC 599 Query: 582 KLKLSDIEKL 591 LK + IE L Sbjct: 600 ILKQNKIEHL 609 >gi|260909464|ref|ZP_05916168.1| DNA mismatch repair protein MutL [Prevotella sp. oral taxon 472 str. F0295] gi|260636389|gb|EEX54375.1| DNA mismatch repair protein MutL [Prevotella sp. oral taxon 472 str. F0295] Length = 606 Score = 458 bits (1179), Expect = e-126, Method: Composition-based stats. Identities = 167/608 (27%), Positives = 286/608 (47%), Gaps = 23/608 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ IKEL+EN++DA ++R++ + GK+ Q+ DNG G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASIIKELVENAVDAGATRIDVNVIDAGKTSVQVIDNGRG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + +A +RH TSKI D + T GFRGEAL SI AV+ + L +R G Sbjct: 65 MSETDARLAFERHATSKIRQASDLFALSTMGFRGEALASIAAVAQVELKTRLASEEIGTS 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++I+G + + P A G+ + +LF+ IPAR FLKS E N I R+A+ YP Sbjct: 125 LSIAGSQFTGQEPCACPVGSNFVIENLFYNIPARRKFLKSNATELNNIITAFERIALVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++FT + + + + +RI V G+ + + N +++ + G+ G P Sbjct: 185 DIAFTLRSNGTEVFNLPSVV----LKQRIVDVFGKRISQDLLSFNVETSICKIHGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + + IP G + E++P +DVN+H Sbjct: 241 ESARKKGAHQYFFVNGRYMKHPYFSKAVMLPFERLIPQGEQVPYFIYFEVNPEDIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK------KMISSFHQDNAPKTH 354 P K+ I+F N + + S+++A+ + + + APK + Sbjct: 301 PTKTEIKFENEQAVWQILSVSVREAVGLFNDVPTIDFDTEGRPDIPVYNPNENAPAPKVN 360 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLL------PSDDPTYSEDNDPVEESEATHYQLGI 408 + +T + +N DL D D D EE + Sbjct: 361 YNPHYNPFDDTPQSTLQSKNNSRWEDLYAGLQSSEEPDLGLFPDTDKDEEGTVSRMIEDK 420 Query: 409 ACAQIH--QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 + A Y+++ GL+++DQH AH R++FE+ + TSQ +L PE++ Sbjct: 421 SPAHYQYKGRYVMTAVKSGLLVIDQHRAHVRILFEQYLRQVAQRSGTSQKVLFPEVVQFT 480 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 E + + DL LG + G A+ IPA L N +++RD++ ++ Sbjct: 481 ASEDLVAQKIMLDLQGLGFELTDLGARNYAVNAIPAGLEGINPIEMIRDMVATAMEKGAG 540 Query: 527 YTLQDRIENILA-TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 L D + LA ++A +I G+ + + EM L+ + N + +G+ + Sbjct: 541 --LHDDVNQALALSLARNAAIPYGQVLGNDEMESLVNALFACQNVNYTPNGQKILAIMAQ 598 Query: 586 SDIEKLFG 593 +D+E+LFG Sbjct: 599 TDLEQLFG 606 >gi|332885974|gb|EGK06218.1| DNA mismatch repair protein mutL [Dysgonomonas mossii DSM 22836] Length = 610 Score = 458 bits (1179), Expect = e-126, Method: Composition-based stats. Identities = 175/611 (28%), Positives = 297/611 (48%), Gaps = 25/611 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RPS +KEL+EN++DA + ++ +I G++ Q+ DNG G Sbjct: 5 IHLLPDSIANQIAAGEVIQRPSSVVKELVENAIDAGADSIQLIIKDAGRTLIQVIDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M++ + MA +RH TSKI DD ++HT GFRGEALPSI A+SH+ + +R ++ G Sbjct: 65 MSATDARMAFERHATSKIRKADDLFDLHTMGFRGEALPSIAAISHVEVKTRRAEDELGTL 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G ++ + PVA G+ V+++F+ +PAR FLKS E I + R+ + P Sbjct: 125 LQIAGSRVENQEPVACPVGSNFSVKNIFYNVPARRKFLKSNDTERRNILTELERIVLVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + FTF K G +RI V+G++F + ++ ++ + G+ G P Sbjct: 185 SIEFTFIDNDVEVLKFPA----GGLRQRIVNVVGKNFNQQLISIDIDTSLAKITGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Q + F+N R ++ + +++A+ I G YP + ++DP +DVN+H Sbjct: 241 ESARKARAQQFFFVNNRYMRHAYFNKAVQSAFEPLILNGEYPNYFIYFQVDPSTIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK------------KMISSFHQD 348 P K+ I+F N I + +I++A+ K + K IS + Sbjct: 301 PTKTEIKFENEQPIWQILTAAIKEALGKFNEVPTIDFDTEGAIDIPIHDPSKNISQPRVN 360 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQ------ENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 P + K + K L E+ +T D P + Sbjct: 361 IDPSYNPFKSPARTNYQRPKFDLDQLYKGFESDKNTADFSTEVAPDVDIFSQQQTGDSEK 420 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + Q YI++ GL+++DQH AH R++F++ + SQ L PEI Sbjct: 421 IVPEMVVHYQYKNRYILTSVKSGLMLIDQHRAHIRILFDQFLSQIEHKRGISQRALFPEI 480 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 I+L E A++ +DL +G G ++ AI PA ++ + QL+ +II++ I+ Sbjct: 481 IELSPSEAAMMPYLKDDLEAVGFDLSHLGNSSYAINGTPAEITNIDSVQLVHNIINKSIE 540 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 S + ++ E + +MA SI G + + EMN+++ ++ + G+ Sbjct: 541 SG-SDVKEEIREALALSMAYAASIPYGHTLSTEEMNKIVDQLFASSAYKHTPDGKTIISM 599 Query: 583 LKLSDIEKLFG 593 L+ IEK+F Sbjct: 600 LEDDAIEKMFK 610 >gi|154504381|ref|ZP_02041119.1| hypothetical protein RUMGNA_01885 [Ruminococcus gnavus ATCC 29149] gi|153795310|gb|EDN77730.1| hypothetical protein RUMGNA_01885 [Ruminococcus gnavus ATCC 29149] Length = 664 Score = 458 bits (1179), Expect = e-126, Method: Composition-based stats. Identities = 168/665 (25%), Positives = 295/665 (44%), Gaps = 74/665 (11%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I+ L + I++IAAGE+IERP+ +KEL+ENS+DA+++ V I GG S ++TDN Sbjct: 1 MPQIQVLDQITIDKIAAGEVIERPASIVKELVENSIDAKAASVTVEIQDGGISLIRVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ E+I A RH TSKI +D ++I + GFRGEAL SI AV+ L+++ ++ Sbjct: 61 GSGIEREDIRNAFLRHSTSKIRKVEDLAHIASLGFRGEALSSISAVTRTELITKTKEDTF 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G S+ GT VR LF+ +PAR FLK+ E + D++ R+A+ Sbjct: 121 GTRYVIEGGVEQSLEDAGAPDGTTFLVRQLFYNVPARRKFLKTPMTEAGHVQDLLMRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P+V+FTF + + S NG + I + G + N +EL+ + + ++GY Sbjct: 181 SHPEVAFTFINNGQTKMR---TSGNGKLKDVIYSIYGREAAANLIELDYSMDGLVMKGYL 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P RGN N F+NGR V++ + I AY + + ++P VV+ ++D ++DV Sbjct: 238 GKPVITRGNRNFENYFVNGRYVKNAMLSKAIEDAYKDFLMQHKFPFVVIHFQVDGEKIDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RF+ + N + + + + + + + + S + +P PK Sbjct: 298 NVHPTKMEMRFQRQQDVYNIVYEGVHRTLLEPELIPQVEAPAPKVISQPKSESPFLLKPK 357 Query: 358 YATSLTNT------------------QEKLFLQENRLSTNDLLPSDDPTYSEDND----- 394 A +E++ R S+ ++ + + Sbjct: 358 TAPQPMEKKPEEKEEPHDEAYFMKKMKERVLSYHQRNSSAEVAKKEQIFRPQAQAERIKD 417 Query: 395 ------PVEESEATHYQLGIACAQIHQNYIIS----QTTDGLVIVDQHAAHE-------- 436 VE+ + + Y + + L + ++H Sbjct: 418 ALARAKEVEKQPQKQAEEQPELIRETPVYETKPVTEEKAEQLNLFEEHLLKREKKAEYKL 477 Query: 437 -RLIFEKMRQDFNSTKI-------------------TSQTLLTPEIIDLLEGECALIMEH 476 +FE + + +L M+ Sbjct: 478 IGQVFETYWLVEFENSLYIIDQHAAHERVLYERTLKEMKNREFTAQYLSPPIILSLSMQE 537 Query: 477 DEDLHR-------LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 + L+ +G + E FG A+R IP L +LL +++D++ D +T Sbjct: 538 AQVLNENMDRFTRIGFEIEPFGGEEYAVRAIPDNLFGIAKKELLLEMLDDLTDGISTSMT 597 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 + I+ +A+M+C +++ ++ + E + L+ E+ N C HGRPT I + ++E Sbjct: 598 PELIDEKVASMSCKAAVKGNNRLSAQEADALIGELLLLENPYHCPHGRPTIIAMTQRELE 657 Query: 590 KLFGR 594 K F R Sbjct: 658 KKFKR 662 >gi|312135298|ref|YP_004002636.1| DNA mismatch repair protein mutl [Caldicellulosiruptor owensensis OL] gi|311775349|gb|ADQ04836.1| DNA mismatch repair protein MutL [Caldicellulosiruptor owensensis OL] Length = 589 Score = 458 bits (1178), Expect = e-126, Method: Composition-based stats. Identities = 169/593 (28%), Positives = 294/593 (49%), Gaps = 14/593 (2%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 KLSE++ + +AAGE++ERP+ +KEL+ENS+DA +S ++ I GG ++ DNG G+ Sbjct: 6 KLSEQLTHILAAGEVVERPASCLKELLENSIDAGASLIDVKIEKGGMKRIEVYDNGKGIH 65 Query: 65 SEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 ++I +RH TSKI +D +I T GFRGEAL +I +V+ +TL+S+ + G + Sbjct: 66 PDDIEYVFERHTTSKIKSLEDIFSIKTMGFRGEALCAISSVAKVTLVSKHLEEEQGCMVK 125 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + G K+ S GT + V D+F+ PARL FLKS E +++ ++AIA+P++ Sbjct: 126 VEGGKVLSKSFCPFKKGTRIVVEDIFYNTPARLKFLKSPSTEQKYCLEMVEKIAIAWPEI 185 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 SF + F + I + G + + N VE + + + + GY PT Sbjct: 186 SFRAEADGKRQ---IFTPGDNKIESVIGSIFGIEIVKNLVEFSIEKESLKVWGYFVNPTV 242 Query: 243 NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPA 302 +R + ++ ++N R ++ K S + A+ ++ GR+P+V L ++I P ++DVNVHP+ Sbjct: 243 SRATRSGYHFYVNRRYIKSKLFSSCVDEAFKNSVITGRFPIVFLFVQIPPSEIDVNVHPS 302 Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSL 362 K ++FR+ + N + ++I ++ + + LSK + + H+ + + Sbjct: 303 KLEVKFRDEQFVYNTVYKAIADSLKSEKMIAKLDLSK--VDDANDAELEHKHIEVLSANS 360 Query: 363 TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQT 422 + + Q N E + E YII Q Sbjct: 361 NDISLVISEQPN------FFEMFSNEPREVVIEQQGFENFDAGNYKIVGYAFDTYIIVQG 414 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 D L ++DQHA HER +FE + S+ + SQ L P + L + ++ + + Sbjct: 415 DDSLYLIDQHAVHERRLFEDFKGQIYSSNVQSQVLAVPVVAQLPSSQKEFVLSNRSIFQK 474 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS-TTYTLQDRIENILATMA 541 +G + E FG N I +R PAIL+K L D+I+ + + +L E++L +A Sbjct: 475 MGFEIEDFGKNEIVVRTWPAILTKSIDKVFLLDVIEMVYEQMVGDKSLVGISEDLLKRIA 534 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C +++ K+ +E ++ + C HGRP +++ DIEK+F R Sbjct: 535 CRAAVKGNSKISDLEKKEIVELVLVKKEIFHCPHGRPVVVEITKKDIEKMFKR 587 >gi|295133314|ref|YP_003583990.1| DNA mismatch repair protein MutL [Zunongwangia profunda SM-A87] gi|294981329|gb|ADF51794.1| DNA mismatch repair protein MutL [Zunongwangia profunda SM-A87] Length = 619 Score = 458 bits (1178), Expect = e-126, Method: Composition-based stats. Identities = 154/619 (24%), Positives = 300/619 (48%), Gaps = 34/619 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ IKEL+EN++DA + ++ V+ GK+ QI D+G G Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVIKELLENAIDAYAHNIQVVVKDAGKTLIQIVDDGAG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + M +RH TSKI ++D +++T GFRGEAL SI A++H+ L ++P G Sbjct: 65 MSLTDARMCFERHATSKIKSAEDLFSLNTKGFRGEALASIAAIAHVELKTKPQNEEVGTC 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G K++S P GT + V++LF+ IPAR NFLKS+ VE I D +R+A+A+P Sbjct: 125 IKIEGSKVTSQEPCVTPKGTSLCVKNLFYNIPARRNFLKSDAVELRHIIDEFQRVAMAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F+ +++ N +RI+ + G V +NE + + + G+ G P Sbjct: 185 SIAFSLFHNGGELFQLPST----NHRQRITNIFGAKTNEKLVPVNEDTEIVKISGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + + F+N R ++ ++ + A+ + YP L L+++P+ +D+N+H Sbjct: 241 EFAKRSRGEQFFFVNNRFIKSPYLNHAVSAAFDGLLKEKTYPSYFLYLDVNPKSIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT-HLPKYA 359 P K+ I+F + + + +I+ ++ + ++ + + + +PK Sbjct: 301 PTKTEIKFDDEHALYAMLRSAIKHSLGQFSVAPVLDFDRDANLDTPYEYKNRQAQVPKIE 360 Query: 360 --------------TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 +S+ + + F +EN S L T + ++ E + Sbjct: 361 VDRSFNPFENELNTSSIRSGKSHNFRKENTQSWESLYAGLKTTPETNQHQFKQVEFESEE 420 Query: 406 LGIAC------------AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 + Q+ + YI+S G++++DQ+ AH R+++E++ ++ Sbjct: 421 VTGKLFDDNHSGSEAGTFQLQKKYIVSTLKSGILVIDQNRAHTRILYEELLKNITIAAAV 480 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 SQ LL P + E ++ E E L + G + I IP ++S+ + LL Sbjct: 481 SQQLLFPLQLQFNTHEIEMLKEIKESLEQTGFIFSNIEDETVEITGIPTLISESEVGILL 540 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 ++ + ++ + + + ++A +++SG + S E ++ + Sbjct: 541 EQLLSDF-ENEVPDNGFSQTDLLAKSLAKGMAVKSGTLLNSTEQQHIVNRLFACKEPDVS 599 Query: 574 NHGRPTFIKLKLSDIEKLF 592 + F+ L + +++K F Sbjct: 600 PFNKSVFVTLTVDELDKKF 618 >gi|206900128|ref|YP_002250800.1| DNA mismatch repair protein MutL [Dictyoglomus thermophilum H-6-12] gi|238058931|sp|B5YE42|MUTL_DICT6 RecName: Full=DNA mismatch repair protein mutL gi|206739231|gb|ACI18289.1| DNA mismatch repair protein MutL [Dictyoglomus thermophilum H-6-12] Length = 575 Score = 458 bits (1178), Expect = e-126, Method: Composition-based stats. Identities = 187/598 (31%), Positives = 306/598 (51%), Gaps = 31/598 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K+ L E++ N+IAAGE++ERP +KEL+ENS+DA ++R+ A GG++ + D+G Sbjct: 3 KVVLLPEELRNKIAAGEVVERPVSVVKELVENSIDAGATRIIVEFANGGETLISVIDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ +A+ R TSKI +D NI T GFRGEAL SI +VS + L S+ + G Sbjct: 63 GMTREDAILALNRFATSKIKTEEDLYNIKTLGFRGEALASIASVSKMELRSKTELED-GV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + G I V + GT+++V DLF+ +PAR FLKS+ ETNLI D ++R+AIAY Sbjct: 122 FIKVEGGVIKEVNLWQGSKGTVIKVSDLFYNVPARKKFLKSKATETNLIIDFVKRIAIAY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF +++ +G+ IS + + + ++ + ++G+ Sbjct: 182 PQISFQLIQDGKSKF---ITPGDGDLENLISLLFDIRVQESLISFQKREGDYCIEGFVSK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +Q Y ++N R V++ IL IR Y I G +P ++ L + +VDVNV Sbjct: 239 PGKLIALKSQDYFYVNRRWVRNNTILQAIREGYKGRILDGYFPFSIIFLTVPYSEVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K ++F+ + F+ +SI++A+++ + F AP+T +Y Sbjct: 299 HPTKREVKFQKEKEVYEFVFRSIREALDE-----------EEKKFFINMKAPETESKEYK 347 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + T ++ L L + QI NYII Sbjct: 348 SDSQITLDREILSLP-------LEFKPYKSEKKLSEAVSEYIPLRSGFRIVGQIFDNYII 400 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 +T D + I+DQHAAHER+ +E+++++ N I + +L P +I++ E E L+ ++ + Sbjct: 401 LETKDKVYIIDQHAAHERIKYEELKEELNLGYIQNVEILFPVVIEVSEEEKILLDKYKDL 460 Query: 480 LHRLGIKAERFGPNAIAIREIP---AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L R E FGP I I ++P K+I L R+II +I + L + I Sbjct: 461 LERFAFSWEDFGPYHIRIVKVPYEFLNFDSKSIENLFREIISDISEKD----LSKLEDKI 516 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +MAC+ ++RSG + EM L++ + + C HGRP ++ D+E+ F R Sbjct: 517 IKSMACHSAVRSGNILIREEMEMLIKLIFEKNIPLTCPHGRPYIWEISREDLERYFHR 574 >gi|302871704|ref|YP_003840340.1| DNA mismatch repair protein MutL [Caldicellulosiruptor obsidiansis OB47] gi|302574563|gb|ADL42354.1| DNA mismatch repair protein MutL [Caldicellulosiruptor obsidiansis OB47] Length = 589 Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 171/593 (28%), Positives = 296/593 (49%), Gaps = 14/593 (2%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 KL E++ + +AAGE++ERP+ +KEL+ENS+DA +S ++ I GG ++ DNG G+ Sbjct: 6 KLPEQLTHILAAGEVVERPASCLKELLENSIDAGASLIDVKIEKGGMKRIEVYDNGKGIH 65 Query: 65 SEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 S++I +RH TSKI +D +I T GFRGEAL +I +V+ +TL+S+ + G + Sbjct: 66 SDDIEYVFERHTTSKIKSLEDIFSIKTMGFRGEALCAISSVAKVTLVSKHLEEEQGCMVK 125 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + G K+ S GT + V D+F+ PARL FLKS E +V+ ++AIA+P++ Sbjct: 126 VEGGKVLSKSFCPFKEGTRIVVEDIFYNTPARLKFLKSPSTEQKYCLEVVEKIAIAWPEI 185 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 SF + F + I + G + + N VE + + + + GY PT Sbjct: 186 SFRAEADGKRQ---IFTPGDNKIESVIGSIFGIEIVKNIVEFSLEKESLKVWGYFVNPTV 242 Query: 243 NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPA 302 +R + ++ ++N R ++ K + S + A+ ++ GR+P+V L ++I P ++DVNVHP+ Sbjct: 243 SRATRSGYHFYVNRRYIKSKLLSSCVDEAFKNSVITGRFPIVFLFVQIPPSEIDVNVHPS 302 Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSL 362 K ++FR+ + N + ++I ++ + + LSK + + + H+ +T+ Sbjct: 303 KLEVKFRDEQFVYNTVYKAITDSLKSEKMIAKLDLSK--VDDANDAELEQKHIEVLSTNS 360 Query: 363 TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQT 422 + + Q N E + E YII Q Sbjct: 361 NDISLVISEQPN------FFEMFSDKPREVVIEQQGFENFGAGNYKIVGYAFDTYIIVQG 414 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 D L ++DQHA HER +FE + S+ + SQ L P + L + ++ + Sbjct: 415 DDSLYLIDQHAVHERRLFEDFKGQIYSSNVQSQVLAVPVVAQLPSSQKEFVLSNRSIFQN 474 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS-TTYTLQDRIENILATMA 541 +G + E FG N I +R PAIL+K L D+I+ + + +L E++L +A Sbjct: 475 MGFEIEDFGKNEIVVRTWPAILTKSIDKVFLLDVIEMVYEQMVEDKSLVGISEDLLKRIA 534 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C +++ K+ +E ++ + C HGRP +++ DIEK+F R Sbjct: 535 CRAAVKGNSKISDLEKKEIVELVLVKKEIFHCPHGRPVVVEITKKDIEKMFKR 587 >gi|126179894|ref|YP_001047859.1| DNA mismatch repair protein [Methanoculleus marisnigri JR1] gi|166232097|sp|A3CWX7|MUTL_METMJ RecName: Full=DNA mismatch repair protein mutL gi|125862688|gb|ABN57877.1| DNA mismatch repair protein MutL [Methanoculleus marisnigri JR1] Length = 585 Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 180/603 (29%), Positives = 296/603 (49%), Gaps = 31/603 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAG--GGKSFFQITDN 59 KIR L +NQIAAGE++ERP+ +KEL+EN++DA+S+ + ++ + ++TDN Sbjct: 3 KIRVLDPDTVNQIAAGEVVERPASVVKELLENAIDADSTSILIDVSSDMAAITKIRVTDN 62 Query: 60 GFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN- 116 G GMT EE +A H TSKI D D S + T GFRGEAL SI AV+ +TL++RP Sbjct: 63 GEGMTPEEAVLAFHPHATSKIRDIADLSAVRTLGFRGEALASIAAVAEVTLVTRPRGGGA 122 Query: 117 -TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 G ++ + G +I V GT + V LF+ PAR FLKS E + V+ + Sbjct: 123 LAGTRLVVRGGEIVEKSEVGAPEGTTIAVERLFYNTPARRKFLKSRNTELAHVYAVVESL 182 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A+A+ +V+F R +G I+ + G D + V + + + ++G Sbjct: 183 ALAHGEVAFRVVHNGKERM---ATQRSGGALNTIAGLYGADLARSLVPVEGRLPFLAIRG 239 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y P+ +RGN +Q V INGR++ + I + +R Y +P RYPV L L ID V Sbjct: 240 YISRPSESRGNPSQISVSINGRSIASRQIAAAVREGYGTLLPKDRYPVAFLDLAIDTGLV 299 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS---TSSVLSKKMISSFHQDNAPK 352 DVNVHP K IR I I ++ +A+ ++ + +++I++ Sbjct: 300 DVNVHPTKREIRLSREREITGAIAAAVDEALAGHDLARETPVEPVQQQIIAADPGQVPTP 359 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 + + + T L L + +L + E Q Sbjct: 360 SPVGEPGAPYTAGHRGLTLSDKQLRRTET----------------EGGENLLPAMEPIGQ 403 Query: 413 IHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 + YI+++ DG L +VDQHAAHER++++++ + + SQ L+TP ++ L E A Sbjct: 404 VAATYIVAEGADGTLYLVDQHAAHERVLYDQVTEQRD-KAAGSQELITPVVLSLPPKESA 462 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 + + L G + FG + A+R +PA L P +R+ I +++ + + T D Sbjct: 463 ALRDAIPLLADEGFVVDEFGRDTFAVRAVPAALGAVEDPGTVRETIADLL-ADESRTAPD 521 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 R E + +AC G++++G + + RL+ ++ + C HGRPT + ++ + Sbjct: 522 RRERVTCIVACRGAVKAGALLTPDQQKRLIMQLARTKTPWTCPHGRPTVVAFDRRRLDGM 581 Query: 592 FGR 594 F R Sbjct: 582 FRR 584 >gi|323343300|ref|ZP_08083527.1| DNA mismatch repair protein MutL [Prevotella oralis ATCC 33269] gi|323095119|gb|EFZ37693.1| DNA mismatch repair protein MutL [Prevotella oralis ATCC 33269] Length = 600 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 160/601 (26%), Positives = 283/601 (47%), Gaps = 15/601 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ IKEL+EN++DA + + ++ GK+ Q+ D+G G Sbjct: 5 IQLLPDTVANQIAAGEVIQRPASVIKELVENAVDAGARNIMVLVVDAGKTSVQVIDDGNG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI D +HT GFRGEAL SI AV+ + L +R + G + Sbjct: 65 MSETDARLSFERHATSKIRKAADLFALHTMGFRGEALASIAAVAQIELRTRLKGEDIGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++ISG K P + G+ + +LFF +PAR FLKS E N I R+A+ YP Sbjct: 125 LSISGSKFMGQEPCSCPEGSNFIIENLFFNVPARRKFLKSNTTELNNIITSFERIALVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF + S + + G +RI V G+ + + + + +QG+ G P Sbjct: 185 DISFVLKSNGSELFNLKA----GGLRQRIIDVFGKRLNQDLLPVEVHTTMCNIQGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + Y F+NGR ++ + + A+ IP+G L ++ P +DVN+H Sbjct: 241 ESARKKEPRQYFFVNGRYMKHPYFNKAVLGAFERLIPVGEQVPYFLYFDLPPEDIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK---KMISSFHQDNAPKTHLPK 357 P K+ I+F N I + ++++A+ S I F + + Sbjct: 301 PTKTEIKFENEQAIWQILSAAVREAVGLFNDVPSIDFDMQGSPDIPVFDSHSNAAVPKVQ 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE-----SEATHYQLGIACAQ 412 Y + ++ + L + + D E +E+ + Q Sbjct: 361 YNPAYNPFDKQSQSSKANSDWEQLYEGLEQGNNRQIDMFETDTEKGTESIITDKSPSHYQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 YI++ GL+I+DQH AH R+++E+ + +SQ +L PEI+ + + Sbjct: 421 YKGRYIMTAVKSGLMIIDQHRAHVRVLYEQYLYRLHDKVASSQKVLFPEIVSFSPSDNII 480 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + + ++ +G + G AI +PA NI L+ D++ I D+ T + + Sbjct: 481 LQKIMPEMTAIGFELSDLGNGDYAINAVPAGTEGVNIVNLVMDMVTSIKDNGTG-VIDEI 539 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 +++ ++A +I G+ + + EM L+ + N++ G+ L+ +IE + Sbjct: 540 DKSMALSLARNAAIPQGQVLNNEEMENLINSLFACSNANYSPDGKNILCILRQQEIEHML 599 Query: 593 G 593 G Sbjct: 600 G 600 >gi|288929629|ref|ZP_06423473.1| DNA mismatch repair protein MutL [Prevotella sp. oral taxon 317 str. F0108] gi|288329134|gb|EFC67721.1| DNA mismatch repair protein MutL [Prevotella sp. oral taxon 317 str. F0108] Length = 607 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 164/609 (26%), Positives = 283/609 (46%), Gaps = 24/609 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ IKEL+EN++DA ++R++ + GK+ Q+ DNG G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASIIKELVENAVDAGATRIDVNVMDAGKTSVQVIDNGRG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + +A +RH TSKI D ++T GFRGEAL SI AV+ + L +R G Sbjct: 65 MSETDARLAFERHATSKIRQASDLFALNTMGFRGEALASIAAVAQVELKTRLASEEIGTS 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I+I+G + + P A G+ + +LF+ IPAR FLKS E N I R+A+ YP Sbjct: 125 ISIAGSQFTGQEPCACPVGSNFVIENLFYNIPARRKFLKSNATELNNIITAFERIALVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++FT + + + + +RI V G+ + + N +++ + G+ G P Sbjct: 185 DIAFTLRSNGTEVFNLPSVV----LKQRIVDVFGKRISQDLLSFNVETSICKIHGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + + +P G + E++P +DVN+H Sbjct: 241 ESARKKGAHQYFFVNGRYMKHPYFNKAVMQPFERLMPQGEQVPYFIYFEVNPEDIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK------KMISSFHQDNAPKTH 354 P K+ I+F N + + ++++A+ + + + APK + Sbjct: 301 PTKTEIKFENEQAVWQILSAAVREAVGLFNDVPTIDFDTEGRPDIPVYNPNENAPAPKVN 360 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE---------ESEATHYQ 405 + +T + +N DL D E+E Sbjct: 361 YNPHYNPFDDTPQAALQTKNNSRWEDLYAGLKADEEADLGLFPDVGSGGQSGETERMIED 420 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 A Q Y+++ GL+++DQH AH R++FE+ + + SQ +L PE++ Sbjct: 421 KSPAHYQYKGRYVMTAVKSGLMVIDQHRAHVRILFEQYLRQVSQRSGASQKVLFPEVVQF 480 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 E + + DL LG + G A+ IPA L N ++RD++ ++ Sbjct: 481 TATEDLMAQKIMPDLQGLGFELTDLGARNYAVNAIPAGLEGINPVAMIRDMVATAMEKGA 540 Query: 526 TYTLQDRIENILA-TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 L D I LA ++A ++ G+ + + EM L+ + N + +G+ + Sbjct: 541 G--LHDEINEALALSLARNAALPYGQVLGNDEMESLVNALFTCQNVNYTPNGQKILAIMA 598 Query: 585 LSDIEKLFG 593 +D+EKL G Sbjct: 599 QTDLEKLLG 607 >gi|333029336|ref|ZP_08457397.1| DNA mismatch repair protein mutL [Bacteroides coprosuis DSM 18011] gi|332739933|gb|EGJ70415.1| DNA mismatch repair protein mutL [Bacteroides coprosuis DSM 18011] Length = 627 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 173/629 (27%), Positives = 294/629 (46%), Gaps = 43/629 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DA + ++ +I GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGAKNIQIIINDAGKTCMQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + +A +RH TSKI + D + T GFRGEAL SI AV+ + L+++ G + Sbjct: 65 MSEIDARLAFERHATSKINKATDLFALRTMGFRGEALASIAAVAQVELLTKTDNEELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ISG K VA N G+ +++LF+ IPAR FLK++ E + I + R+A+ P Sbjct: 125 VFISGSKYEGQEAVATNTGSHFIIKNLFYNIPARRRFLKTDATELSKILNEFERIALVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +VSF+ + ++ + + +RI + G+ + ++ + I + GY P Sbjct: 185 EVSFSLFSNETELFNLP----ETQIRQRIIHLFGKKLNQELLSVDVDTTLIKISGYVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +R + F+NGR + + + AY E IP+G L ++DP +DVN+H Sbjct: 241 EASRKRGAHQFFFVNGRYMHHPYFYKAVMEAYEELIPVGDQISYFLYFDVDPATIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS---KKMISSFHQDNAPKTHLPK 357 P K+ I+F N I I +++ + K S I +F Sbjct: 301 PTKTEIKFENEQAIWQIIAAGVKETLGKFNEVPSIDFDTEGMPDIPAFDDTEPVAIPQVH 360 Query: 358 YATSLTNTQ--------------------EKLFLQENRLSTNDLLPSDDPTYSEDNDP-- 395 T Q E L+ R S + P D T S + Sbjct: 361 VNTDFNPFQANGGGGSSAPSSYQRKEIDWEPLYAGLERGSKVNTPPPADFTMSNLVESGV 420 Query: 396 ---------VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 EE E+ +Y+ G Q YI++ GL+I+DQH AH R++++K Sbjct: 421 VESKASPSLYEEQESKNYEKGSTLLQFKGRYILTSVKSGLMIIDQHRAHIRVLYDKFIDQ 480 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 K ++Q +L PEIIDL + A++ ED +G + G + AI IP + Sbjct: 481 IKQKKGSAQGVLFPEIIDLPASQAAVLESIKEDFAAVGFELTNLGGGSYAINGIPEGIEG 540 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILA-TMACYGSIRSGRKMQSIEMNRLLREME 565 + L+ +++ + +++ +++IL+ T+A +I G+ + S EM+ L+ + Sbjct: 541 LDPVDLVLKMLE--TEMEKGGDVKEEVQSILSLTLAKSAAIVYGQVLSSEEMSSLVDALF 598 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + G + +I+K F R Sbjct: 599 ACVSPNYTPDGLSVLSTIMDEEIDKRFER 627 >gi|312127452|ref|YP_003992326.1| DNA mismatch repair protein mutl [Caldicellulosiruptor hydrothermalis 108] gi|311777471|gb|ADQ06957.1| DNA mismatch repair protein MutL [Caldicellulosiruptor hydrothermalis 108] Length = 588 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 169/593 (28%), Positives = 294/593 (49%), Gaps = 15/593 (2%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 KL E++ + +AAGE++ERP+ +KEL+ENS+DA +S ++ I GG ++ DNG G+ Sbjct: 6 KLPEQLTHILAAGEVVERPASCLKELLENSIDAGASLIDVKIEKGGIKRIEVYDNGKGIH 65 Query: 65 SEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 ++I +RH TSKI +D +I T GFRGEAL +I +V+ +TL+S+ + G + Sbjct: 66 PDDIEYVFERHTTSKIKSFEDIFSIKTMGFRGEALCAISSVAKVTLVSKHLEEEQGCMVK 125 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + G K+ S GT + V D+F+ PARL FLKS E +V+ ++AIA+P++ Sbjct: 126 VEGGKVISKSLCPFKEGTRIVVEDIFYNTPARLKFLKSPSTEQKYCLEVVEKIAIAWPEI 185 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 SF + F + I + G + + N VE + + + + GY PT Sbjct: 186 SFRAEADGKRQ---IFTPGDNKIESVIGSIFGIEIVKNLVEFSLEKESLKVWGYFVNPTV 242 Query: 243 NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPA 302 +R + ++ ++N R ++ K + S I A+ ++ GR+P+V L ++I P ++DVNVHP+ Sbjct: 243 SRATRSGYHFYVNRRYIKSKLLSSCIDEAFKNSVITGRFPIVFLFIQIPPSEIDVNVHPS 302 Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSL 362 K I+FR+ + N I ++I ++ + + + LSK + + T + ++ Sbjct: 303 KLEIKFRDERFVYNTIYKAIADSLKSEKMIPKADLSKVDVGNDTVRERKYTEVLSANSND 362 Query: 363 TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQT 422 + +S E + E YII Q Sbjct: 363 ISL---------VISEQPNFFEMFSKREEVAIEQQSFENFDAGNYKIVGYAFDTYIIVQG 413 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 D L ++DQHA HER +FE + S+ + SQ L +P ++ L + ++ + + Sbjct: 414 DDSLYLIDQHAVHERRLFEDFKSQVYSSNVQSQVLASPVVVQLPSSQKEFVISNVSVFQK 473 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS-TTYTLQDRIENILATMA 541 +G + E FG N I +R P +LS L D+I+ I +L + E++L +A Sbjct: 474 IGFEIEDFGKNEIVVRTWPVLLSSNIDAIFLLDVIEMIYQQMVENKSLVEISEDLLKRIA 533 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C +++ K+ +E ++ + C HGRP +++ +IEK+F R Sbjct: 534 CRAAVKGNSKISDLEKKEIVELVLIKKEIFHCPHGRPVVVEISKREIEKMFKR 586 >gi|294507734|ref|YP_003571792.1| DNA mismatch repair protein mutL [Salinibacter ruber M8] gi|294344062|emb|CBH24840.1| DNA mismatch repair protein mutL [Salinibacter ruber M8] Length = 784 Score = 456 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 177/651 (27%), Positives = 302/651 (46%), Gaps = 60/651 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +S+++ NQIAAGE+++RP+ KELIEN+LDA +S +E ++ G + Q+ D+G G Sbjct: 135 IEVMSDRLANQIAAGEVVQRPASVAKELIENALDAGASSIEVLLKDAGSTLVQVIDDGCG 194 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M + +RH TSK+ DD I T GFRGEAL SI AV+ +TL ++ +++ G Sbjct: 195 MGPGDAERCFERHATSKLRSVDDLERIRTLGFRGEALASIAAVAQVTLKTKRVEDDAGTL 254 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G + RP A+ GT V VR+LFF +PAR NFLK+ E +T ++ +A+A P Sbjct: 255 VRVEGGEQVEKRPCAIPNGTSVAVRNLFFNVPARRNFLKTPATELKHLTQTVQSLALANP 314 Query: 181 KVSFTFSTIKSNRYKMNFQS---TNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + Y + + RI + G D + V + ++S+++ L+G+ Sbjct: 315 DTAVRLEHDGHEHYDLPAAPDSDWHAATRARILGLFGGDHEDELVAVEDESSDLRLRGFV 374 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+F+R + ++F+NGR V D+++ ++ AY E +P G +P L L ++P +VDV Sbjct: 375 GAPSFHRKTRGEQFLFVNGRAVTDRYLSHAVKKAYGELVPDGAFPFFALFLAMNPERVDV 434 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK----- 352 NVHP K ++F + + I F+ ++++A+ + +S + P+ Sbjct: 435 NVHPQKEEVKFDDQSGIYGFLRSAVRRALGRVHVSPQMDDGDDEADNEEDSPGPESDGTG 494 Query: 353 ----------THLPKYATSLTNTQ--------------------------EKLFLQENRL 376 T P+ + Q E + Sbjct: 495 SGGHAVSGDGTSSPRPTPTSFQPQRSSGDATDSSGRSSSGPSPQSPKPRPENPSVSPGDQ 554 Query: 377 STNDLLPSDDPTYSEDNDPVEESEATHYQLG-------------IACAQIHQNYIISQTT 423 S D S D +H Y+++ T Sbjct: 555 SDALYRRPDGGDESSPGDAPASPPHREGGSSSTSAADGAERSGRRPVWGLHDTYVVTPTE 614 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 G+++VDQ AAH R+++E+ R + SQ LL P +DL E L+ E +DL L Sbjct: 615 TGMMLVDQRAAHLRVLYERARAHLRDQQGASQRLLFPHTVDLSPAEVELLDELRDDLDAL 674 Query: 484 GIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY 543 G + ER +++R +PA + N +L +++++ S+ +R E++ TMA Sbjct: 675 GFELERLSGRTVSVRGVPADVPDGNEDTILEELLEQYR-SAQDAVEDERREHLAKTMAQR 733 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ G+ + E LL ++ G PT +KL + ++ FGR Sbjct: 734 SAVDRGQPLSEEERRALLDDLFDCEMPYADPTGTPTIVKLSMEELADRFGR 784 >gi|219851577|ref|YP_002466009.1| DNA mismatch repair protein [Methanosphaerula palustris E1-9c] gi|219545836|gb|ACL16286.1| DNA mismatch repair protein MutL [Methanosphaerula palustris E1-9c] Length = 603 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 177/604 (29%), Positives = 292/604 (48%), Gaps = 19/604 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRV--ETVIAGGGKSFFQITDNG 60 IR+L + INQIAAGE+IERP+ KELIEN++DA + ++ E G + +I DNG Sbjct: 6 IRQLDQATINQIAAGEVIERPASVAKELIENAIDAGADQIRCEVTTENGEITRIRIVDNG 65 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM+ E+ +A H TSK+ DD S IHT GFRGEAL SIGAVS + L++R ++ +G Sbjct: 66 RGMSREDAAIACLPHTTSKLRTLDDLSTIHTMGFRGEALASIGAVSAMMLVTRQKESTSG 125 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++I G I V GT V V DLF+ PAR F KS + E + ++ R+A+A Sbjct: 126 TRVSIRGGAIDEVAEAGSALGTTVTVDDLFYNTPARKKFQKSLKTELGHLYGIVERIALA 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P + F + R S N + I + G + + ++ + ++G+ Sbjct: 186 NPGIGFRLLLNRRGRITTQRSS---NKRDTIVGLYGPELARGLIPVSASDGPVQIEGFIS 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P +R Q ++ IN R + ++ +L+ IR Y +P RYPV L L ID VDVN Sbjct: 243 PPAISRLEPYQVHLSINRRDIYNRALLNAIREGYGTLLPKDRYPVAFLDLTIDTTLVDVN 302 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH-----QDNAPKT 353 VHPAK +R + + I+ A+++ + + + Sbjct: 303 VHPAKRQVRLDQEQTVTAAVTAMIRAALDEADLLYRPITYHPAGQKAEGVGETNALYAGS 362 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ--LGIACA 411 + + + + + LL + + EE H Sbjct: 363 SGAARTGTPAPSSSPSPRRLQQTTAPRLLTTQQLRLTSRPVSPEEGAPGHSNLPEMRVLG 422 Query: 412 QIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 Q+ Y+I++T D L ++DQHAAHER++++++R+ + + +Q L+TP ++ + E Sbjct: 423 QVANTYLIAETPDQTLCLIDQHAAHERILYDQIRR---NRTVQTQELITPVLLTVTLQEA 479 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 I E R G + E FG ++ A+ +P I + P+ +R+II +I Sbjct: 480 EAIREATPIFEREGFRIEEFGRDSFAVSAVPVIFGRIEDPEQVREIIAGVIGEEPGDQTA 539 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 R I + +AC G++++G + + + +LL ++ + C HGRPT ++ L + Sbjct: 540 TR-NAITSRVACRGAVKAGAALTNEQGEQLLAQLAATEDPFTCPHGRPTVVRFTLEQLAA 598 Query: 591 LFGR 594 LF R Sbjct: 599 LFLR 602 >gi|325285173|ref|YP_004260963.1| DNA mismatch repair protein mutL [Cellulophaga lytica DSM 7489] gi|324320627|gb|ADY28092.1| DNA mismatch repair protein mutL [Cellulophaga lytica DSM 7489] Length = 626 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 156/628 (24%), Positives = 297/628 (47%), Gaps = 43/628 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KEL+EN++DA ++ ++ +I GGKS Q+ DNG G Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATSIKLIIKDGGKSLIQVVDNGIG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M++ + ++ +RH TSKI ++D N++T GFRGEAL SI A++ + L ++ G Sbjct: 65 MSATDARLSFERHATSKIQSAEDLFNLNTKGFRGEALASIAAIARVDLQTKTANEEIGTA 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G +I S VA GT + V+ LFF IPAR NFLKS+ VE ITD R+A+A+P Sbjct: 125 IEIEGSEIKSQEVVATPQGTSLAVKHLFFNIPARRNFLKSDAVELRHITDEFHRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F + S + + NF +RI + G+ V +NE + + + G+ Sbjct: 185 SIAFNYYNNGSELFNLP----ESNFRQRIVNIFGKKSNEKLVPVNEDTQVVKVSGFICKS 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + Y F+N R ++ ++ + A+ I G +P L LE+DP +D+N+H Sbjct: 241 EFAKKSRGEQYFFVNNRFIKSHYLHYAVLAAFEGLIKPGTHPGYFLNLEVDPSSIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK-------------------- 340 P K+ ++F + + + +I+ ++ + ++ + Sbjct: 301 PTKTEVKFDDEQTLYAILRSTIKHSLGQFNVAPTLDFDHDSNLQTPYEYKNKNAVLPKVT 360 Query: 341 ---MISSFHQDNAPKT----------HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + F ++ P T Y + E L+++ Sbjct: 361 VDSTFNPFAEETKPTTASNSPSASSSSFSSYKKPSPQSWESLYVETPNTEVKSTGFEGVS 420 Query: 388 TYSEDNDP-VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 SE + + + Q+ + YI++ G+V++DQ AH+R+++EK + Sbjct: 421 FESEVSAKSIFDDTEDDLDTSAITFQLKRKYIVTTIKSGMVVIDQGRAHQRVLYEKFLRT 480 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 + SQ LL P + E ++ + ++L +G + N + I IP ++++ Sbjct: 481 VTLNEGLSQQLLFPIQLSFSLAEIDILKDIKDNLTTMGFVFGQINENIVEINGIPPMVAE 540 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG-SIRSGRKMQSIEMNRLLREME 565 + + +++ + + +IL+ C ++++G + + L+ ++ Sbjct: 541 AEVDTIFDELMADCQQNVGADGFSQA--DILSKALCKSLAVKTGDVLDKLSQAALVNDLF 598 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 S +P ++ + +DI+K F Sbjct: 599 ACTESMVSPFNKPIYVTITENDIDKKFM 626 >gi|253316433|ref|ZP_04839646.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus str. CF-Marseille] Length = 669 Score = 455 bits (1171), Expect = e-125, Method: Composition-based stats. Identities = 151/671 (22%), Positives = 283/671 (42%), Gaps = 84/671 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-KMISSFHQDNAPKTHLPKY 358 HP K +R + I+ IQ+A + + + L + + + Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLYSFEQQKIEFEQ 358 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSD------------------------DPTYSEDND 394 + N QEK F E S + + + D S N+ Sbjct: 359 RQNTENNQEKTFSSEESNSKSFMAENQNDEIVIKEDSYNPFVTKTSESLITDDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 E+ E + ++ Q + ++ + + A+ + ++ + Sbjct: 419 TCEKDEDYFKKQQEILQEMDQTFDSNEDAS-VQNYENKASDDYYDVNDIKGTKSKDPKRR 477 Query: 455 QTLLTPEII-----------------------------DLLEGECALIMEHDEDLHRLGI 485 + + + E + L L Sbjct: 478 IPYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTF 537 Query: 486 KA----------------------ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 E FG + + P K + ++++D+I+ I++ Sbjct: 538 HFSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEE 597 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 598 KKVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINF 656 Query: 584 KLSDIEKLFGR 594 ++EKLF R Sbjct: 657 SKYELEKLFKR 667 >gi|300728333|ref|ZP_07061698.1| DNA mismatch repair protein MutL [Prevotella bryantii B14] gi|299774398|gb|EFI71025.1| DNA mismatch repair protein MutL [Prevotella bryantii B14] Length = 640 Score = 455 bits (1170), Expect = e-125, Method: Composition-based stats. Identities = 161/641 (25%), Positives = 288/641 (44%), Gaps = 55/641 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ IKEL+ENS+DA + ++ ++ G++ Q+ D+G G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENSVDAGAKSIQVLVVDAGRTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI +DD +HT GFRGEAL SI AV+ + L +R + G Q Sbjct: 65 MSDTDARLSFERHATSKIKKADDLFALHTMGFRGEALASIAAVAQIELKTRQASEDIGTQ 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++ISG K P + G+ ++ +LFF +PAR FLKS E N I R+ + P Sbjct: 125 LSISGSKFIGQEPCSCPIGSNFKIENLFFNVPARRKFLKSNTTELNNILTAFERIVLVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F+ + + + + G+ RI + G+ + + +N +++ + G+ G P Sbjct: 185 NIHFSLYSNGTEMFNLQP----GSIRHRILDIFGKRLNQDLLPVNVETSLGKISGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + +A+ +PLG + ++DP +DVN+H Sbjct: 241 ESARKKGAHQYFFVNGRYMKHPYFNKAVMSAFDRLVPLGEQVPYFIYFDVDPHNIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS-------SFHQDNAPKT 353 P K+ I+F N I + ++++A+ + + S +Q +AP+ Sbjct: 301 PTKTEIKFENEQAIWQILSAAVKEAVGLFNNVPTIDFDTEGKPEIPVFGESGNQLSAPRV 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLL------------------------------- 382 + ++ E L Q+ Sbjct: 361 NYNPSYNPFESSSEDLVSQDGEQQIGQTFASKIDSNYAAITQGEIFESKQARVPEEWGKL 420 Query: 383 ----------PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 D S N VE E Q YI++ GL+I+DQH Sbjct: 421 YEGLKSKTVSQEGDIFESRQNTVVESKEHLVEDKSPLHYQYKAKYIMTAVKSGLMIIDQH 480 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AH R+++E+ ++ SQ +L PE + + ++ + D+ +G + G Sbjct: 481 RAHVRILYEQYQKQLIEHTFQSQKVLFPETVRFTPSQQVVLQDIFSDMVDMGFELTDLGG 540 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 + A+ IP L N L+ DI+ ID + ++ +++ ++A +I G+ + Sbjct: 541 GSYAVNAIPMGLDGINPITLVEDIVHSAIDMGKSMK-EEMRQSLSLSLARNAAIPQGQIL 599 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + EM ++ + N + G+ L +I+ LFG Sbjct: 600 SNEEMEAIVNGLFACSNPNYAPDGKSILCILTQQEIDHLFG 640 >gi|332638522|ref|ZP_08417385.1| DNA mismatch repair protein MutL [Weissella cibaria KACC 11862] Length = 665 Score = 455 bits (1170), Expect = e-125, Method: Composition-based stats. Identities = 170/650 (26%), Positives = 302/650 (46%), Gaps = 62/650 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +LS+ + NQIAAGE+IERP+ +KEL+EN++DA S +++ ++ G +I D+G G Sbjct: 4 IHELSDILANQIAAGEVIERPASVVKELVENAIDANSQQIDILVEEAGVKSIRIIDDGDG 63 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++++ A RH TSKI +D +H+ GFRGEALPSI +V+ + L + G + Sbjct: 64 IDADQVTKAFLRHATSKITSRNDLFRVHSLGFRGEALPSIASVADVVLETATAGAEQGKR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ GT + V D+FF PARL +LKS+ E I DVI R+A++YP Sbjct: 124 VHYKGGELLEEIGTGARKGTDITVSDIFFNTPARLKYLKSQSTELAQIVDVINRLALSYP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++ F S + + + NGN + I+ + G + + N+ + GY +P Sbjct: 184 EIGFRLSHNGNEVMR---TAGNGNLQQVIAAIYGVQQARKMQAIQAEDNDFEVSGYISLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + V INGR +++ + + Y + +GR+P+ VL + +DP VDVNVH Sbjct: 241 ELTRASRSYISVLINGRYIKNYNLTKALIKGYGSKLMVGRFPIAVLQITMDPLLVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS-----------------------VL 337 P K +R + + I Q++++ + + ++ Sbjct: 301 PQKHEVRLSKESQLMALIEQAVKERFANENLIPNAYENYLGEEQNAAENDAAFIAQLNDA 360 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFL--------------QENRLSTNDLLP 383 S+ +SS+ ++ P +P + + Q +S Sbjct: 361 SQPYVSSYAPESTPDHPVPMTPADYEKLADNFSVSDVTPVVVHHAEELQGTAVSEFATKY 420 Query: 384 SDDPTYSEDND-------------------PVEESEATHYQLGIACAQIHQNYIISQTTD 424 D + ++ + + Q+H ++ +Q+ + Sbjct: 421 QDGADINPFDEGGTAMVAEQKSLDLTDDSIQAVDEHGQTFPKLDYIGQMHGTFLFAQSEE 480 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL ++DQHAA ER+ +E R++ + Q LL P +++ + + I H+ +L ++G Sbjct: 481 GLYLIDQHAAQERVKYEYYREEIGKVGLEMQKLLVPIVLNYPKIDILKIQSHEVELAQVG 540 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 + E FG +A+ +RE P K +R+++D I+ + T+ E MAC Sbjct: 541 LHLEPFGDDAVIVREHPGWFEKGQEEDTIREMVDWILRDG-SLTVAQFRERTAIMMACKR 599 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ M E LL ++ + N C HGRP + D++K+F R Sbjct: 600 SIKANWSMNDFEAKGLLDQLSHSENPYNCPHGRPVLVTFSTLDMQKMFKR 649 >gi|255994618|ref|ZP_05427753.1| DNA mismatch repair protein MutL [Eubacterium saphenum ATCC 49989] gi|255993331|gb|EEU03420.1| DNA mismatch repair protein MutL [Eubacterium saphenum ATCC 49989] Length = 634 Score = 455 bits (1170), Expect = e-125, Method: Composition-based stats. Identities = 169/636 (26%), Positives = 305/636 (47%), Gaps = 49/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + ++IAAGE++E P +KEL+ENS+DA + + I G G + +++D+G G Sbjct: 2 IRILDKNVSDKIAAGEVVESPLSVVKELVENSIDAGAKSIAVQIKGNGSDYIRVSDDGCG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ A +RH TSK+ D +N+HT GFRGEAL SI VS + + ++ ++ G + Sbjct: 62 IAGDEVETAFKRHATSKLEKFSDLNNLHTLGFRGEALASIAKVSGVIMYTKRREDPLGTE 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + ++ +A++ GT + V+DLFF IPAR L ++ + N I + I RM+I Y Sbjct: 122 LVLEAGEVIKKEDIAVDDGTGIIVQDLFFNIPARKKDLSYKRAKKNEIAEFINRMSIYYS 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF + + NGN + ++Q+ G D+ V+++E++ IT+ G Sbjct: 182 DISFRLKVDEEL---LYVTEGNGNRRDVLAQIYGADYAARLVQVDEEAFGITVSGLVSPQ 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + ++ +FINGR ++ F+ I+ Y++ I RYP LL+ + +DVN+H Sbjct: 239 GDSYKDTSRQMIFINGRAIRSAFLEGIIKKEYSDIIMGERYPSYFLLVNLPGVDIDVNIH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN----------- 349 P K I F + ++N I+++++KA + K I S+ ++ S D Sbjct: 299 PNKKEILFLDKAKVKNAIVKTLEKAFSGKEIIQSTPINADFKSFVKDDYVDIGSSKQSNI 358 Query: 350 -------APKTHLPKYATSLTNTQEKLFL-------QENRLSTNDLLPSDDPTYSEDNDP 395 + + A+S +E + + +E+ D ++ + E Sbjct: 359 EEVFEKDSSEGFSYSAASSEAEFREAVNIGYRGHEGRESAFPPADKNVPEEEAFREAIRC 418 Query: 396 VEESE-----------------ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 ++ E I YI+++ + ++DQHAAHER+ Sbjct: 419 EQQRESLREVEHAAVEGKPVNLPYDIAALEPMGVIFDTYILARDDEAFYMIDQHAAHERV 478 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +EK+ +F S +Q L+ P I L + L LG + + FG + I Sbjct: 479 FYEKLLGEFLSKDKDTQRLIAPIIKSLSAEADSNKKNIMSRLSELGFEVDDFGEKTLRIF 538 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 IP+ + ++ L D + + Y +R + +A+ AC +++ ++ E+ Sbjct: 539 GIPSFMKEEEAQGFLDDYL--MSTQGFGYDEDERQLDRIASKACKAAVKGRDVLKGDEIK 596 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L+ + K C HGRPT I+++ DIEK+F R Sbjct: 597 ALILSLAKCKQPLACPHGRPTMIRMREYDIEKMFKR 632 >gi|269118665|ref|YP_003306842.1| DNA mismatch repair protein MutL [Sebaldella termitidis ATCC 33386] gi|268612543|gb|ACZ06911.1| DNA mismatch repair protein MutL [Sebaldella termitidis ATCC 33386] Length = 621 Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 181/634 (28%), Positives = 315/634 (49%), Gaps = 58/634 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L E + N IAAGE++E P+ IKEL+ENSLDA + V+ + GGK +I+DNG Sbjct: 3 KIKILDESVSNIIAAGEVVENPASMIKELLENSLDAGADSVKIEVFNGGKD-VKISDNGS 61 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ ++++RH TSKIS DD N+ T+GFRGEAL SI +VS +T+ ++ ++N G Sbjct: 62 GMEKNDMMLSIERHATSKISTKDDIFNLMTYGFRGEALASISSVSKMTISTKTKESNVGY 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I +V ++ N GT +E+RDLF+ PAR FL+ E E N I D++ + A+ Sbjct: 122 KLTAYAGSIRNVEEISRNNGTEIEIRDLFYNTPARKKFLRKESTEYNKIRDIVLKEALVN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 +FT K ++ I ++ G++ + N + GY G Sbjct: 182 YDTAFTLIFDDKPSIK----TSGKGIENTILELFGKNVLKNLKKFE--------HGYLGS 229 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + + + ++N R V+ I + Y + G+YP V+ L DP+++DVNV Sbjct: 230 VEILRSSKDYIFTYVNKRYVKSNTIERAVLDGYYTKLMKGKYPFAVIFLNTDPKEIDVNV 289 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKA--------------INKKGISTSSVLSKKMISSF 345 HP+K ++F N II I ++ + K+ ++ S+ +K+ + F Sbjct: 290 HPSKKIVKFSNDKIIYTQIKSAMDDYFYLEERREWQPNIDLLKQNVNISAAEPEKIENLF 349 Query: 346 HQDNAPKTHLPKYA-----------------------TSLTNTQEKLFLQENRLSTNDLL 382 + + ++ T +T ++ F++EN + Sbjct: 350 SDETLKGENKQFFSLETLDNRDVETRIIDERPKKAIETLITEPEDSDFIRENIKTDYPSY 409 Query: 383 PSD--DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 + + SE E + QI YI+ + + L I DQH HER+++ Sbjct: 410 KEESKENNVSESIQKSSEENIKKPEDYKIIGQIFNMYILVENKNQLEIYDQHIIHERILY 469 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 E++++ F S K+ Q L+ P+ I+L + L+ME+ E G + FG N I +R + Sbjct: 470 EELKEKFYSKKLDFQNLIIPQKIELTSPDKNLVMENIEVFRDFGFDVDEFGENEIILRSV 529 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 PA + +I + D++ ++ + ++D E I+ +M+C G+I++G+K+ E++ Sbjct: 530 PAFDFRDSIKNVFMDLLADLKND---IEVKDLRERIIISMSCKGAIKAGQKLDPDEISSF 586 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +R + + C HGRP I + D++K+FGR Sbjct: 587 IRRLHEIGK-YTCPHGRPIIINIPKDDLDKMFGR 619 >gi|146297976|ref|YP_001192567.1| DNA mismatch repair protein MutL [Flavobacterium johnsoniae UW101] gi|189030399|sp|A5FNH2|MUTL_FLAJO RecName: Full=DNA mismatch repair protein mutL gi|146152394|gb|ABQ03248.1| DNA mismatch repair protein MutL [Flavobacterium johnsoniae UW101] Length = 644 Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 168/643 (26%), Positives = 305/643 (47%), Gaps = 58/643 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KEL+EN++DA+++ ++ +I GKS Q+ DNG G Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELLENAVDAKATDIKLIIKDAGKSLVQVIDNGVG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 MT + + RH TSKI +D ++ T GFRGEAL SI A++H+ + ++ Q+ G Sbjct: 65 MTVTDARLCFARHATSKIRQAEDLFSLGTKGFRGEALASIAAIAHMEMKTKQEQDELGTH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G K S + GT V++LFF IPAR NFLKS+ VE + D +R+A+A+P Sbjct: 125 IVIEGSKFVSQEVAVLPKGTSFAVKNLFFNIPARRNFLKSDTVEFRHVMDEFQRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F+F S Y + + +RI ++ V +NE + I++QG+ P Sbjct: 185 NIHFSFYHNGSELYNLPA----AGYRQRIVGIMSGKTNEKLVPVNEDTEIISIQGFVCKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + N + + F+N R ++ ++ + AY + G P L L++ P +D+N+H Sbjct: 241 EFAKKNRGEQFFFVNDRFIKSGYLHHAVMAAYDGLLKDGSQPSYFLYLQVPPNTIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST--------------------SSVLSKK 340 P K+ I+F + + + SI+ ++ + ++ + V + + Sbjct: 301 PTKTEIKFDDEQALYAILRASIKHSLGQFNVAPVLDFDRDSNLDTPYHYKDVEAEVPTIQ 360 Query: 341 MISSFHQDNAPKTHLPKYAT-------------------------------SLTNTQEKL 369 + +F+ KT+ T + E L Sbjct: 361 VDGTFNPFTDDKTNQHYTKAGSGSGSGYSSGSSSSSGSGSGSSYSGYSKRVEPTVSWESL 420 Query: 370 FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 ++ + + + S +E+ ++ Q QIH+ YI+S G+VIV Sbjct: 421 YVGLDTENPETIESSPFIFENEEVTSSLFNDDEVEQASQKTYQIHKKYIVSPIKSGMVIV 480 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQH AH+R+++E+ + + +SQ LL P + E LI E L G E Sbjct: 481 DQHRAHQRILYEQFLLNMTVNQASSQQLLFPLDLFYSSSEMKLIEELKPSLETTGFVFEE 540 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 + + I IP +++ + ++ ++ ++ D + + + I +MA ++++G Sbjct: 541 AQTDHVVISGIPVNITESEVSLVIEQLLSDLQD-GIPASSYSQNDTIAKSMAKSLAVKTG 599 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 + E + L+ + + + +PTFI +++ DI+K F Sbjct: 600 SYLTEKEQDNLVNGLFACKDPNISPFQKPTFITMRVEDIDKKF 642 >gi|332829604|gb|EGK02250.1| hypothetical protein HMPREF9455_01520 [Dysgonomonas gadei ATCC BAA-286] Length = 619 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 169/615 (27%), Positives = 296/615 (48%), Gaps = 30/615 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RPS +KEL+EN++DA + ++ +I G++ Q+ DNG G Sbjct: 11 IHLLPDSIANQIAAGEVIQRPSSVVKELVENAIDAGADTIQLIIKDAGRTLVQVIDNGKG 70 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M++ ++ MA +RH TSKI DD +HT GFRGEALPSI A++ + + +R ++ G Sbjct: 71 MSATDVRMAFERHATSKIRSADDLFALHTMGFRGEALPSIAAIAQVEVKTRREEDELGTL 130 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ISG K+ + +A G+ V+++FF +PAR FLKS E I + R+ + P Sbjct: 131 LQISGSKVETQECIACPKGSNFSVKNIFFNVPARRKFLKSNDTERRNILTELERIVLVNP 190 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F+F+ + N +R+ V+G++F + ++ ++ + ++G+ G P Sbjct: 191 GIEFSFTDNDIEALRYPAC----NLRQRVVNVVGKNFNQQLISIDIDTSLVKIKGFVGKP 246 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + A+ IP G P + +++P +DVN+H Sbjct: 247 ESARKTRALQYFFVNGRYMRHPYFNKAVTAAFEPLIPSGENPNYFIYFDVEPDTIDVNIH 306 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL----- 355 P K+ I+F N I + ++++A+ K + + K Sbjct: 307 PTKTEIKFENEQPIWQILSAAVKEALGKFNEVPTIDFDTTDAIDIPIHDPSKNVSQPRVN 366 Query: 356 --PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ- 412 P Y + + ++N + S + D +++ + Sbjct: 367 INPSYNPFKSPVSNSGYQRQNVDWEKFYEGFEKDKGSSNLDIEPDTDVNIFGHSSDPGMN 426 Query: 413 -------------IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 YI++ GL+++DQH AH R++F++ + SQ L Sbjct: 427 TSSVSTEMVVHYQYKNKYILTSVKSGLMLIDQHRAHVRILFDQFIAQIRQKRGISQRALF 486 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P+II+L E A+I +DL +G G NA AI P+ ++ + QL+ ++I Sbjct: 487 PDIIELSPSEAAMIPYLMDDLEAVGFDLSHLGNNAYAINGTPSEITNVDPVQLVHNMISR 546 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 +DS + ++ E++ +MA SI G K+ EMN+++ ++ +P G+ T Sbjct: 547 SVDSG-SDVKEEIQESLALSMANAASIPYGHKLSDEEMNKIVDQLFASPAHKHTPDGK-T 604 Query: 580 FIKLKLSD-IEKLFG 593 I L D IEK+F Sbjct: 605 IISLLEDDVIEKMFR 619 >gi|313204195|ref|YP_004042852.1| DNA mismatch repair protein mutl [Paludibacter propionicigenes WB4] gi|312443511|gb|ADQ79867.1| DNA mismatch repair protein MutL [Paludibacter propionicigenes WB4] Length = 614 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 158/612 (25%), Positives = 300/612 (49%), Gaps = 24/612 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ +KEL+ENS+DA ++ ++ +I G++ Q+ DNG G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVLKELVENSIDAGATFIQILIKDAGRTLIQVVDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKI +DD ++ T GFRGEAL SI AV+ + L +R ++ G Sbjct: 65 MSETDARMAFERHATSKIKNADDLFSLRTMGFRGEALASIAAVAQVELRTRRAEDELGVL 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G ++ V + GT +V++LFF +PAR FLKS+ VE + I R+A+ Sbjct: 125 VEIAGTRVFKQESVQCDLGTSFQVKNLFFNVPARRRFLKSDNVEKSHILTEFYRIALVNT 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+F+F +++ + + + + + + +N +++ GY G P Sbjct: 185 SVAFSFFDGDEEIFQLPASNNKIRIENIFGKSAKKRWQQQLLSIETSTNLVSIFGYVGKP 244 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + +A Y F+NGR ++ + + AY + I P + ++DP+ +DVN+H Sbjct: 245 EYAQKSAT-QYFFVNGRYMRHPYFHKAVLLAYNQMIQASESPNYFIYFDVDPQTIDVNIH 303 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK-------MISSFHQDNAPKT 353 P K+ I+F N I + + ++++A+ K + S ++ IS + Sbjct: 304 PTKTEIKFENEQAIWSILTAAVKEALGKFNVIPSIDFDQEGAVDIPTTISVENVRPPQTN 363 Query: 354 HLPKYATSLTNTQEKL----------FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 P Y T+ ++ F ++ S + + + ++ + Sbjct: 364 FNPNYNPFGTSNYKRPVLDWEDLYGGFEKKEEPSESVIDWEPETEIIITPSFTQQEQQKV 423 Query: 404 YQLGIACA---QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 + A Q +I++ GL+++DQH AH R++F+ ++K +SQ +L P Sbjct: 424 IENLETRAENYQYKNRFILTGLKSGLLMIDQHRAHTRILFDLFLSQIENSKGSSQQVLFP 483 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 EI++L + + DL +G + E + +++ + + + ++ LL +++D+ Sbjct: 484 EILELSADDALFFEQIIPDLQHVGFEFETMENHTYSVKGVSSHVGTGSVIDLLLEMLDKA 543 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 ++ T E I ++A SI+SG+++ S EM+ L+ + N + G+ Sbjct: 544 KTTAQDPTA-SIHETISLSLAEASSIKSGQRLSSEEMSDLIDRLFACSNHNFTPDGKKIM 602 Query: 581 IKLKLSDIEKLF 592 ++EK F Sbjct: 603 TIFSQDELEKRF 614 >gi|256828082|ref|YP_003156810.1| DNA mismatch repair protein MutL [Desulfomicrobium baculatum DSM 4028] gi|256577258|gb|ACU88394.1| DNA mismatch repair protein MutL [Desulfomicrobium baculatum DSM 4028] Length = 610 Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 189/619 (30%), Positives = 301/619 (48%), Gaps = 42/619 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L ++ NQIAAGE++ERPS +KEL+EN+LDA ++R+ I GG+S +++DNG Sbjct: 6 QIRLLPPELQNQIAAGEVVERPSSVLKELVENALDAGATRIRIQIRDGGQSCIRVSDNGS 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +AV RH TSK+ D +I++FGFRGEALPSI +VS + S + G Sbjct: 66 GIFEDQLELAVTRHATSKLQNLSDLQHINSFGFRGEALPSIASVSRFRIASARHDGDGGV 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G +I AM GT VE+ DLF +PARL FLK ET +++ R+A+A Sbjct: 126 LEVLHG-RILRQDKTAMPKGTDVEINDLFSNVPARLKFLKKPGTETRKCAELVARIALAN 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F ++ + +R++ + ++ + + ++ K E+++ G G Sbjct: 185 PHVDFELVNADRTVHRFLA---AQDLTQRLAAIWPQEVVESLHGVDFKDGELSVHGLVGD 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +G ++ V++N R VQDK ILS IR AY I YP V+ LEI P +VDVNV Sbjct: 242 PAMAQGRPDRILVYVNARPVQDKTILSAIREAYRGRILGKEYPQAVIFLEIPPDEVDVNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS---------------- 343 HPAK+ +RF++ I I +++ + + + T ++ + +S Sbjct: 302 HPAKTEVRFQDDGAIFRIIRRAVLQTLERNVHQTHAIEHAQPLSVSQVHASLPVMEPRFP 361 Query: 344 --------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 S + P+ S Q+ ++ L+ +D + Sbjct: 362 VPGEAKIESGQDALLYEQDWPQKFASSAAAQKLFESADSSLAKTGPPAADTQALRLPSAG 421 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 S Q Q Y+I D + ++DQHAAHER++F +R T+ + Sbjct: 422 QNASTTHAPTAVQYLGQFAQTYLILAAKDEITLIDQHAAHERVLFNMLRA--QGTRGERR 479 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P I L + AL E L LG E P + + IPA+L+ + L+D Sbjct: 480 PLLLPLEIPLHPAQAALAQEIWTKLDELGFSLELT-PGRLMLHSIPALLTPSKAKEFLQD 538 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 I+ E +E++ A MAC +I++G + E L+ + + C H Sbjct: 539 ILTE---------KATSMEDLWAVMACKAAIKAGDTLTPNEALELVDSWQHVSEKNYCPH 589 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRP ++ + D+EKLF R Sbjct: 590 GRPVAVRWGVGDLEKLFKR 608 >gi|217967465|ref|YP_002352971.1| DNA mismatch repair protein MutL [Dictyoglomus turgidum DSM 6724] gi|226723033|sp|B8E280|MUTL_DICTD RecName: Full=DNA mismatch repair protein mutL gi|217336564|gb|ACK42357.1| DNA mismatch repair protein MutL [Dictyoglomus turgidum DSM 6724] Length = 572 Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 185/598 (30%), Positives = 305/598 (51%), Gaps = 34/598 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K+ L E+I N+IAAGE+IERP +KEL+ENS+DA + R+ GG++ + D+G Sbjct: 3 KVILLPEEIRNKIAAGEVIERPVSVVKELVENSIDAGAKRITVEFINGGETLISVIDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ +A+ R TSKI +D NI T GFRGEAL SI +VS + + S+ + G Sbjct: 63 GMTKEDAILALNRFATSKIKTEEDLYNIKTLGFRGEALASIASVSKVEVRSKTETED-GV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + G I + + GT+++V DLF+ +PAR FLKS+ ETNLI D ++R+A+AY Sbjct: 122 FIKVEGGVIQEINLWQGSKGTVIKVFDLFYNVPARRKFLKSKTTETNLIVDFVKRIAMAY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF N++ S NG + +S + + NN + L K ++G+ Sbjct: 182 PEISFQLIQDGKNKF---ITSGNGKLEDVVSLLFDIEIHNNLIFLQRKEGNYIIEGFISK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +Q Y ++N R V++ IL I+ Y + G +P ++ L + +VDVNV Sbjct: 239 PGKLISLKSQDYFYVNRRWVRNNIILQAIKEGYKNRLLEGYFPFSIVFLTLPYHEVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K I+F + F+ ++I++A++ + S + + +++ + Sbjct: 299 HPTKREIKFEKEKEVYEFVSKAIKEALDSEDKRFFSGVK----ALEGKEHKNHVGIKTEK 354 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ E EN+LS + + QI NYII Sbjct: 355 ELLSLPMEFEHKSENKLSEDISEYISLKS-----------------GFRIVGQIFDNYII 397 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 +T D + I+DQHAAHER+ +E+++++ + + + +L P +I++ E E L+ +H + Sbjct: 398 VETKDRVYIIDQHAAHERIRYEELKKELSLGYLQNVEILFPLVIEVSEEEKELLNKHKDL 457 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKN---IPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L + E FGP I I +P K + I L ++II +I + L + I Sbjct: 458 LEKFAFSWEDFGPYHIRIIRVPYEFLKFDSKSIENLFQEIISDISEKD----LSKLEDKI 513 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +MAC+ +IRSG + EM L+ + + C HGRP ++ ++E+ F R Sbjct: 514 IKSMACHSAIRSGNILVREEMEVLINLIFERKIPLTCPHGRPYIWEISKEELERYFHR 571 >gi|329733582|gb|EGG69910.1| DNA mismatch repair protein, C-terminal domain protein [Staphylococcus aureus subsp. aureus 21193] Length = 669 Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 153/671 (22%), Positives = 286/671 (42%), Gaps = 84/671 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQ------D 348 HP K +R + I+ IQ+A + + + L K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLHQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENR--------------LSTNDLLPSDDPTYSEDND 394 + + S + K F+ EN+ ++ D S N+ Sbjct: 359 RQNTENNQEKTFSSEESNSKPFMAENQNDEIVIKEDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 E+ E + ++ Q + + + + A+ + ++ + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSN-DDTTVQNYENKASDDYYDVNDIKGTKSKDPKRR 477 Query: 455 QTLLTPEII-----------------------------DLLEGECALIMEHDEDLHRLGI 485 + + + E + L L Sbjct: 478 IPYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTF 537 Query: 486 KA----------------------ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 E FG + + P K + ++++D+I+ I++ Sbjct: 538 HFSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEE 597 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 598 KKVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINF 656 Query: 584 KLSDIEKLFGR 594 ++EKLF R Sbjct: 657 SKYELEKLFKR 667 >gi|83814237|ref|YP_445831.1| DNA mismatch repair protein MutL [Salinibacter ruber DSM 13855] gi|83755631|gb|ABC43744.1| DNA mismatch repair protein MutL [Salinibacter ruber DSM 13855] Length = 647 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 176/647 (27%), Positives = 300/647 (46%), Gaps = 60/647 (9%) Query: 7 SEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSE 66 S+++ NQIAAGE+++RP+ KELIEN+LDA +S +E ++ G + Q+ D+G GM Sbjct: 2 SDRLANQIAAGEVVQRPASVAKELIENALDAGASSIEVLLKDAGSTLVQVIDDGCGMGPG 61 Query: 67 EIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAIS 124 + +RH TSK+ DD I T GFRGEAL SI AV+ +TL ++ +++ G + + Sbjct: 62 DAERCFERHATSKLRSVDDLERIRTLGFRGEALASIAAVAQVTLKTKRVEDDAGTLVRVE 121 Query: 125 GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF 184 G + RP A+ GT V VR+LFF +PAR NFLK+ E +T ++ +A+A P + Sbjct: 122 GGEQVEKRPCAIPNGTSVAVRNLFFNVPARRNFLKTPATELKHLTQTVQSLALANPDTAV 181 Query: 185 TFSTIKSNRYKMNFQS---TNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 Y + + RI + G D + V + ++S+++ L+G+ G P+ Sbjct: 182 RLEHDGHEHYDLPAAPDSDWHAATRARILGLFGGDHEDELVAVEDESSDLRLRGFVGAPS 241 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 F+R + ++F+NGR V D+++ ++ AY E +P G +P L L ++P +VDVNVHP Sbjct: 242 FHRKTRGEQFLFVNGRAVTDRYLSHAVKKAYGELVPDGAFPFFALFLAMNPERVDVNVHP 301 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK--------- 352 K ++F + + I F+ ++++A+ + +S + P+ Sbjct: 302 QKEEVKFDDQSGIYGFLRSAVRRALGRVHVSPQMDDGDDEADNEEDSPGPESDGTGSGGH 361 Query: 353 ------THLPKYATSLTNTQ--------------------------EKLFLQENRLSTND 380 T P+ + Q E + S Sbjct: 362 AVSGDGTSSPRPTPTSFQPQRSSGDATDSSGRSSSGPSPQSPKPRPENPSVSPGDQSDAL 421 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLG-------------IACAQIHQNYIISQTTDGLV 427 D S D +H Y+++ T G++ Sbjct: 422 YRRPDGGDESSPGDAPASPPHREGGSSSTSAADEAERSGRRPVWGLHDTYVVTPTETGMM 481 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 +VDQ AAH R+++E+ R + SQ LL P +DL E L+ E +DL LG + Sbjct: 482 LVDQRAAHLRVLYERARAHLRDQQGASQRLLFPHTVDLSPAEVELLDELRDDLDALGFEL 541 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR 547 ER +++R +PA + N +L +++++ S+ +R E++ TMA ++ Sbjct: 542 ERLSGRTVSVRGVPADVPDGNEDTILEELLEQYR-SAQDAVEDERREHLAKTMAQRSAVD 600 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 G+ + E LL ++ G PT +KL + ++ FGR Sbjct: 601 RGQPLSEEERRALLDDLFDCEMPYADPTGTPTIVKLSMEELADRFGR 647 >gi|172087925|emb|CAQ35198.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] Length = 669 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 153/671 (22%), Positives = 285/671 (42%), Gaps = 84/671 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQ------D 348 HP K +R + I+ IQ+A + + + L K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENR--------------LSTNDLLPSDDPTYSEDND 394 + S + K F+ EN+ ++ D S N+ Sbjct: 359 RQNTEDNQEKTFSSEESNSKPFMVENQNDEIVIREDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 E+ E + ++ Q + + + + A+ + ++ + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSN-DDTSVQNYENKASDDYYDVNDIKGTKSKDPKRR 477 Query: 455 QTLLTPEII-----------------------------DLLEGECALIMEHDEDLHRLGI 485 + + + E + L L Sbjct: 478 IPYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTF 537 Query: 486 KA----------------------ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 E FG + + P K + ++++D+I+ I++ Sbjct: 538 HFSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEE 597 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 598 KKVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINF 656 Query: 584 KLSDIEKLFGR 594 ++EKLF R Sbjct: 657 SKYELEKLFKR 667 >gi|86131714|ref|ZP_01050311.1| DNA mismatch repair protein MutL [Dokdonia donghaensis MED134] gi|85817536|gb|EAQ38710.1| DNA mismatch repair protein MutL [Dokdonia donghaensis MED134] Length = 626 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 166/627 (26%), Positives = 301/627 (48%), Gaps = 41/627 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KEL+EN++DA +S ++ ++ GK+ QI D+G G Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGASSIKLIVKDAGKTLIQIIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + M+ +RH TSKI +DD N++T GFRGEAL SI AV+H+ L +RP G Sbjct: 65 MSDTDARMSFERHATSKITTADDLFNLNTKGFRGEALASIAAVAHVALKTRPEGAEVGTH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G KI + A GT + V++LFF IPAR NFLKS VE + D +R+A+A+P Sbjct: 125 IEIEGSKIITQEVCATPKGTSLAVKNLFFNIPARRNFLKSNSVELRHVIDEFQRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F + +++ GN +RI + G V + E+++ +T+ G+ P Sbjct: 185 DIAFAMYHNEGELFQLP----KGNLKQRIVAIFGGKTNEKLVPVQEETDILTINGFVVKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F++ + + F+N R ++ ++ + A+ +P L L++DP +D+N+H Sbjct: 241 EFSKKTRGEQFFFVNDRFIKSAYLNHAVTAAFDGLLPDRARASYFLYLKVDPATIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK--------------------- 339 P K+ I+F + + + +I+ ++ + I+ ++ Sbjct: 301 PTKTEIKFDDEHALYAMLRSTIKHSLGQFSIAPVLDFNRDSELDTPYDYKNKGVVTPKIE 360 Query: 340 --KMISSFHQDNAPK--THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 + + F APK P Y EK++ +T + + S N Sbjct: 361 VDRTFNPFESVPAPKRGAQRPDYEKPDVTGWEKMYEGMESQATAGSTVTFEKEVSTGNMF 420 Query: 396 VEESEATHYQLGIAC---------AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 A Q+++ YI+S G+VI+DQH AH+R+++E+ ++ Sbjct: 421 ESGLNTKAAAPIAATAVSQDESSTYQLNKKYIVSTIKSGMVIIDQHKAHQRVLYEEFLRN 480 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 + SQ LL P + E ALI E E L G + + I IP +++ Sbjct: 481 ITVKESVSQQLLFPLTLTYSTTELALIEELKEGLENTGFIFGLISGDILEINGIPTSITE 540 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 +P ++ ++ ++ ++ + + + + +MA +++ G + S+ L+ + Sbjct: 541 SQVPVVIDQLLSDL-ENEVPDSGFSQTDTLAKSMAKSLAVKGGETLDSLSREHLVNSLFA 599 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFG 593 S + TFI + D+++ F Sbjct: 600 CKEPSISPTNKKTFITITGDDLDRKFK 626 >gi|21282908|ref|NP_645996.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus MW2] gi|49486135|ref|YP_043356.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus MSSA476] gi|297208057|ref|ZP_06924488.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912139|ref|ZP_07129582.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus TCH70] gi|25090739|sp|Q8NWX9|MUTL_STAAW RecName: Full=DNA mismatch repair protein mutL gi|56749198|sp|Q6G9R7|MUTL_STAAS RecName: Full=DNA mismatch repair protein mutL gi|21204347|dbj|BAB95044.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus MW2] gi|49244578|emb|CAG43007.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus MSSA476] gi|172087917|emb|CAQ35194.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] gi|296887300|gb|EFH26202.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886385|gb|EFK81587.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus TCH70] Length = 669 Score = 452 bits (1162), Expect = e-124, Method: Composition-based stats. Identities = 150/671 (22%), Positives = 281/671 (41%), Gaps = 84/671 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-KMISSFHQDNAPKTHLPKY 358 HP K +R + I+ IQ+A + + + L + + + Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSD------------------------DPTYSEDND 394 + N QEK F E S ++ + D S N+ Sbjct: 359 RQNTENNQEKTFSSEESNSKPFMVENQNDEIVIREDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 E+ E + ++ Q + + + + A+ + ++ + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSN-DDTSVQNYENKASDDYYDVNDIKGTKSKDPKRR 477 Query: 455 QTLLTPEII-----------------------------DLLEGECALIMEHDEDLHRLGI 485 + + + E + L L Sbjct: 478 IPYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTF 537 Query: 486 KAE----------------------RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 FG + + P K + ++++D+I+ I++ Sbjct: 538 HFSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEE 597 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 598 KKVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINF 656 Query: 584 KLSDIEKLFGR 594 ++EKLF R Sbjct: 657 SKYELEKLFKR 667 >gi|89891567|ref|ZP_01203071.1| DNA mismatch repair protein mutL [Flavobacteria bacterium BBFL7] gi|89516114|gb|EAS18777.1| DNA mismatch repair protein mutL [Flavobacteria bacterium BBFL7] Length = 608 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 166/608 (27%), Positives = 304/608 (50%), Gaps = 23/608 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + NQIAAGE+++RP+ +KEL+EN++DA ++++ +I GK+ Q+ D+G G Sbjct: 5 IRLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGATQISLIIKDAGKTLVQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKI ++D ++HT GFRGEAL S+ A++H++L ++ +++ G Sbjct: 65 MSMTDARMAFERHATSKITNANDLFDLHTKGFRGEALASVAAIAHVSLKTKREEDDLGTF 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I G K+ + PV GT++ VR+LF+ +PAR FLKS+ VE ITD R+A+A+P Sbjct: 125 LEIEGSKVVNQEPVVTTKGTMISVRNLFYNVPARRKFLKSDNVELRNITDEFHRVAMAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V FS+ + + + N+ +RI ++G V + E++ + + G+ G P Sbjct: 185 QVGLKFSSNDTELFNLPI----SNYRQRIVNIMGAKTNEKLVPVEEETELVKISGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F R Y F+N R ++ ++ + +A+ + P L L++ VD+N+H Sbjct: 241 EFARKTKGLQYFFVNDRFIKHNYLHHAVTSAFEGLLKEKNNPTYFLFLDVPKDSVDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ ++F + + + S++ A+ + I+ + ++ T PK Sbjct: 301 PTKTEVKFDDEHSLYAIVRASVKHALGQFSINAIDFDKEPQYEVPYEYTKKNTSSPKIEV 360 Query: 361 -----------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE-----SEATHY 404 S + + + + L + S D EE S Sbjct: 361 NPDFNPFSNTGSFSTNKSTPSYSKPAPQAWESLYAGLDEASTLVDETEEVSMTTSMFEDE 420 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 ++ Q+ + +IIS G++++ Q+ AHER+++E++ + + TSQ LL P ++ Sbjct: 421 KVTRNIFQLQRKFIISTLKSGMLVIHQNRAHERVLYEQLLKHITVQRGTSQQLLFPLRLN 480 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L E +++ + + L + G + N + I +P L +K++P++L II + + Sbjct: 481 LPVDEVSILTQLQDQLEQTGFIFKTLANNVVEIVGLPIQLKEKHVPEVLETIIRD-SELD 539 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 + + + ATMA +IRSG M M L+ E+ S G+ FI + Sbjct: 540 LPKESFSQSDRLAATMARGMAIRSGESMSQEAMENLVDELFACKESELTAQGKKVFINIT 599 Query: 585 LSDIEKLF 592 + F Sbjct: 600 GESLNLKF 607 >gi|253731915|ref|ZP_04866080.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724325|gb|EES93054.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 669 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 151/671 (22%), Positives = 281/671 (41%), Gaps = 84/671 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-KMISSFHQDNAPKTHLPKY 358 HP K +R + I+ IQ+A + + + L + + + Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSD------------------------DPTYSEDND 394 + N QEK F E S ++ + D S N+ Sbjct: 359 RQNTENNQEKTFSSEESNSKPFMVENQNDEIVIREDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 E+ E + ++ Q + + + + A+ + ++ + Sbjct: 419 TREKDEDYFKKQQEILQEMDQTFDSN-DDTSVQNYENKASDDYYDVNDIKGTKSKDPKRR 477 Query: 455 QTLLTPEII-----------------------------DLLEGECALIMEHDEDLHRLGI 485 + + + E + L L Sbjct: 478 IPYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTF 537 Query: 486 KAE----------------------RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 FG + + P K I ++++D+I+ I++ Sbjct: 538 HFSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEIEEIIKDMIELILEE 597 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 598 KKVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINF 656 Query: 584 KLSDIEKLFGR 594 ++EKLF R Sbjct: 657 SKYELEKLFKR 667 >gi|300087585|ref|YP_003758107.1| DNA mismatch repair protein MutL [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527318|gb|ADJ25786.1| DNA mismatch repair protein MutL [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 562 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 173/596 (29%), Positives = 299/596 (50%), Gaps = 37/596 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++L + +IAAGE++ERP+ +KEL+EN++DA + ++ I GG + +++D+G Sbjct: 1 MPIQQLDRNTVARIAAGEVVERPASVVKELVENAIDAAAGAIDIEIRDGGTALIRVSDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ + ++P+A++RH TSKI+ DD ++ + GFRGEAL SI AV+ L +++ +G Sbjct: 61 IGIAAVDLPLALERHATSKITSFDDLDSLSSLGFRGEALSSIAAVAELEVLTATAD-ESG 119 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + +++ GT V V LF +PARL FLK+ ET +T V+ A+A Sbjct: 120 SSLVSRHGEVTVKTAARAR-GTTVSVSRLFSAVPARLKFLKTTATETGHVTAVVGHYALA 178 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P + FT S ++ +G + ++V+G + ++++ + + L G Sbjct: 179 RPDIRFTLSVDGH---RVLASPGSGRLRDAAAEVLGRETAARMMDIDSAIDSMALHGLVA 235 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P R N + Y F+N R V+ + + A + +GRYP+ VL L + P + D+N Sbjct: 236 PPEIARANRSGQYFFVNRRWVKSPMLTRALAEAGHGLLTVGRYPIAVLSLTLPPAETDIN 295 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 +HPAK+ I+FR + + +FI +S++ + G S V+ + Y Sbjct: 296 IHPAKTEIKFRQDSRVFDFIRRSVRSLL--VGESPVPVIHE--------------SPSSY 339 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 SL F++ L + + A QI Y+ Sbjct: 340 RPSLDRRASANFIEN--------LFPPTAPGTSSLPEPGLTVARALPALRPVGQIADCYL 391 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +++ DGL I+DQHAAHER+++EK S SQ+LL+P I L E + + Sbjct: 392 LAEGPDGLYIIDQHAAHERVMYEKALAARASRVPASQSLLSPRDIGLSPAETTALTGTSD 451 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L G E FG + +R +PAIL+ + L + + +S + T ++ + Sbjct: 452 LLKEFGFIVEDFGGRTVLVRAVPAILADGDWETALHEFL----NSPESRTRGEQ--KMAE 505 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC+ ++R+GR + E+ LL ++E+ + C HGRPT +KL+ S +E+ F R Sbjct: 506 LIACHSAVRAGRTLSPEEIRALLADLERTDLPATCPHGRPTLMKLETSALERHFKR 561 >gi|255690560|ref|ZP_05414235.1| DNA mismatch repair protein MutL [Bacteroides finegoldii DSM 17565] gi|260624021|gb|EEX46892.1| DNA mismatch repair protein MutL [Bacteroides finegoldii DSM 17565] Length = 633 Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats. Identities = 162/634 (25%), Positives = 290/634 (45%), Gaps = 48/634 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ +KEL+EN++DAE+ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVVKELVENAIDAEAQNIHVLVTDAGKTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIREASDLFALRTMGFRGEALASIAAVAQVELKTRPESEELGTK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G + S V+ + G+ +++LFF +PAR FLK+ E + I R+A+ +P Sbjct: 125 LVIAGSTVESQEAVSCSKGSNFSIKNLFFNVPARRKFLKANSTELSNILAEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + S + + +RI + G+ + + + + + GY P Sbjct: 185 EVAFSLYSNDSELFNLPVSP----LRQRIMAIFGKKLNQQLLNIEVNTTMVKISGYVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + IP G + E+DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMEAYEQLIPAGEQISYFIYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + S+++++ K S I +F Q + + Sbjct: 301 PTKTEIKFENEQAIWQILSASVKESLGKFSAIPSIDFDTEDMPDIPAFEQSTSSEPPKVH 360 Query: 358 YATSLTN------------------TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 Y + E L+ + S + + T E+ E+ Sbjct: 361 YNSDYNPFKVSAGGSGGGSYSRSKVEWEDLYGGLTKASKMNNPMPEPETDWENPFSGEQQ 420 Query: 400 EATHYQLGIACA--------------------QIHQNYIISQTTDGLVIVDQHAAHERLI 439 + G Q +I++ GL+++DQH AH R++ Sbjct: 421 SFVTEKEGETLTSIASTLYGDEPVVEKGNQHLQFKGRFILTSVKSGLMLIDQHRAHIRVL 480 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 F++ + + SQ +L PEI+ L E A++ +DL +G G + AI Sbjct: 481 FDRYMEQIRQKQGVSQGVLFPEILQLPASEAAVLQGIMDDLAAVGFDLSNLGGGSYAING 540 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 IP+ + N +L+R+++ ++ ++ + T+A +I G+ + + EM Sbjct: 541 IPSGIEGLNPVELVRNMLHTAMEKGN-DVKEEIQNILALTLARAAAIVYGQVLSNEEMVS 599 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 L+ + P+ + G+ +K DIE+LF Sbjct: 600 LVDNLFACPSPNYTPDGKTVLTTIKEEDIERLFK 633 >gi|254557088|ref|YP_003063505.1| DNA mismatch repair protein [Lactobacillus plantarum JDM1] gi|254046015|gb|ACT62808.1| DNA mismatch repair protein [Lactobacillus plantarum JDM1] Length = 678 Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats. Identities = 177/673 (26%), Positives = 292/673 (43%), Gaps = 86/673 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS + +QIAAGE++ERP+ +KEL+EN++DA +++V+ ++ G ++ D+G Sbjct: 3 KIHELSSVLADQIAAGEVVERPASVVKELVENAVDAHATQVDILVQESGVQSIRVIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ A +RH TSKI +D +H+ GFRGEALPSI +V+ + + + TG Sbjct: 63 GIDDAEVLTAFKRHATSKITSREDLFRVHSLGFRGEALPSIASVADVVMNTST--GATGT 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I G K+ P + GT + V DLFF PARL +LKS Q E I DV+ R+A++Y Sbjct: 121 SIHYRGGKLLQQSPAPLRQGTDITVTDLFFNTPARLKYLKSPQTELANILDVVNRIALSY 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F ++ + G+ + I+ + G V + + + L G+ + Sbjct: 181 PAVAFRLVHNAK---ELLKTAGRGDLQQVIAGIYGVQNARKMVAIQGSTTDFKLSGFVAL 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + V INGR ++++ + + Y + +GRYP+ V+ L +DP VDVNV Sbjct: 238 PELTRASRQYITVLINGRAIKNQQLTKAVIKGYGSKLMVGRYPIAVIALTMDPLLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS--------------------- 338 HP K +R + + +I + + S++ + Sbjct: 298 HPTKQEVRLSKEPELAKLVSTTITDRLVDVNLIPSALTNLGSHRREHLNTDQLAMDLNAV 357 Query: 339 -----------KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 F A T P AT++ +T NR + + ++PS+ Sbjct: 358 SSQYQVADKTTPASTEQFAASLAAATMQPSSATTMVSTTSAQPSAVNRAAVSAVVPSESA 417 Query: 388 TYSEDNDPV----------------------------------------------EESEA 401 S + + E + Sbjct: 418 ASSANQPIMISHRDELTATPVQAFDQRYQSESGALPFGETAEPLETSTAASVPTSEAPDT 477 Query: 402 THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 + Q+H Y++++ DG+ I+DQHAA ER+ +E RQ Q LL P Sbjct: 478 ERFPQLRYLGQMHGTYLLAEADDGMYILDQHAAQERINYEYYRQAIGEVSADQQNLLVPI 537 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 I+D + I E L LGI E FG N+ + P +R++ID ++ Sbjct: 538 ILDYPTSDVLKIKEKLPLLAELGIHLESFGGNSFIVHAHPTWFKAGQEEDTIREMIDWLL 597 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 T+ E M+C +I++ + + LL ++ N C HGRP + Sbjct: 598 QDDK-LTVAQFREKSAIMMSCKRAIKANHHLDDQQARALLAKLPTCENPFNCPHGRPVTV 656 Query: 582 KLKLSDIEKLFGR 594 SD+E++F R Sbjct: 657 HFTNSDMERMFKR 669 >gi|28378883|ref|NP_785775.1| DNA mismatch repair protein [Lactobacillus plantarum WCFS1] gi|308181083|ref|YP_003925211.1| DNA mismatch repair protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|38258030|sp|Q88UZ8|MUTL_LACPL RecName: Full=DNA mismatch repair protein mutL gi|28271720|emb|CAD64626.1| DNA mismatch repair protein HexB [Lactobacillus plantarum WCFS1] gi|308046574|gb|ADN99117.1| DNA mismatch repair protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 678 Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats. Identities = 177/673 (26%), Positives = 292/673 (43%), Gaps = 86/673 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS + +QIAAGE++ERP+ +KEL+EN++DA +++V+ ++ G ++ D+G Sbjct: 3 KIHELSSVLADQIAAGEVVERPASVVKELVENAVDAHATQVDILVQESGVQSIRVIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ A +RH TSKI +D +H+ GFRGEALPSI +V+ + + + TG Sbjct: 63 GIDDAEVLTAFKRHATSKITSREDLFRVHSLGFRGEALPSIASVADVVMNTST--GATGT 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I G K+ P + GT + V DLFF PARL +LKS Q E I DV+ R+A++Y Sbjct: 121 SIHYRGGKLLQQSPAPLRQGTDITVTDLFFNTPARLKYLKSPQTELANILDVVNRIALSY 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F ++ + G+ + I+ + G V + + + L G+ + Sbjct: 181 PAVAFRLVHNAK---ELLKTAGRGDLQQVIAGIYGVQNARKMVAIQGSTTDFKLSGFVAL 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + V INGR ++++ + + Y + +GRYP+ V+ L +DP VDVNV Sbjct: 238 PELTRASRQYITVLINGRAIKNQQLTKAVIKGYGSKLMVGRYPIAVIALTMDPLLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS--------------------- 338 HP K +R + + +I + + S++ + Sbjct: 298 HPTKQEVRLSKEPELAKLVSTTITDRLVDVNLIPSALTNLGSHRREHLNTDQLAMDLNAV 357 Query: 339 -----------KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 F A T P AT++ +T NR + + ++PS+ Sbjct: 358 SSQYQVADKTTPASTEQFAASLAAATMQPSSATTMVSTTSAQPSAVNRAAVSAVVPSESA 417 Query: 388 TYSEDNDPV----------------------------------------------EESEA 401 S + + E + Sbjct: 418 ASSANQPIMISHRDELTATPVQAFDQRYQSESGALPFGETAEPLETSTAASAPTSEAPDT 477 Query: 402 THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 + Q+H Y++++ DG+ I+DQHAA ER+ +E RQ Q LL P Sbjct: 478 ERFPQLRYLGQMHGTYLLAEADDGMYILDQHAAQERINYEYYRQAIGEVSADQQNLLVPI 537 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 I+D + I E L LGI E FG N+ + P +R++ID ++ Sbjct: 538 ILDYPTSDVLKIKEKLPLLAELGIHLESFGGNSFIVHAHPTWFKAGQEEDTIREMIDWLL 597 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 T+ E M+C +I++ + + LL ++ N C HGRP + Sbjct: 598 QDDK-LTVAQFREKSAIMMSCKRAIKANHHLDDQQARALLAKLPTCENPFNCPHGRPVTV 656 Query: 582 KLKLSDIEKLFGR 594 SD+E++F R Sbjct: 657 HFTNSDMERMFKR 669 >gi|91214646|ref|ZP_01251619.1| putative DNA mismatch repair protein [Psychroflexus torquis ATCC 700755] gi|91187073|gb|EAS73443.1| putative DNA mismatch repair protein [Psychroflexus torquis ATCC 700755] Length = 615 Score = 451 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 169/618 (27%), Positives = 295/618 (47%), Gaps = 34/618 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KEL+EN++DA ++ V +I GGK+ Q+ DNG G Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASVVKELMENAVDANATLVSLIIKEGGKTLIQVVDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 MT + ++ +RH TSKI ++D ++HT GFRGEAL SI AVSH+ + ++ G Sbjct: 65 MTDTDARLSFERHATSKIKAAEDLFHLHTKGFRGEALASIAAVSHVDMKTKTEVEEVGTH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G I+ P GT + V++LFF IPAR NFLKS VE + D +R+A+ +P Sbjct: 125 LMVEGSHITQQEPCVTPIGTSISVKNLFFNIPARRNFLKSASVEHKHVIDEFQRVALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+F F S + + NF RI V+G V + E+++ I L G+ G P Sbjct: 185 SVAFKFIHNDSELFNLPV----ANFRHRIVGVMGSKMNEKLVPVKEETDLIQLYGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + + F+N R ++ ++ + +A+ + YP L L+++P +D+N+H Sbjct: 241 EFAKKSRGEQFFFVNDRFIKHPYLHHAVSSAFEGLLKDKAYPTYFLYLQVNPESIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-----------------------SSVL 337 P K+ ++F N I + + S++ ++ + +S SV+ Sbjct: 301 PTKTEVKFDNEHAIYSILRSSVKHSLGQFNVSPVLDFNKDASMETGYDQHKLGAKIPSVV 360 Query: 338 SKKMISSFHQDNAPKT--HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 + + F + + LP + N + +DLL + + Sbjct: 361 VDRNFNPFEAEYKFSSTFKLPSSKRNTPNPSWEALYTNLEGQDDDLLNIEVDSEQVSGSL 420 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 + H G Q + YII+ T ++I+DQH AH R+++E++ ++ + SQ Sbjct: 421 FQGEHTQHKSSGT--FQFQRKYIITSTKSEMLIIDQHRAHFRILYEELLRNITAKPALSQ 478 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P + L E ++ E L G G + + I IP L + LL Sbjct: 479 QLLFPLKLQLDTNEISVFKTLKESLTNAGFSISEIGEDFVKINGIPNRLPESETSILLDQ 538 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 ++ + +S + D+ + + ++A +I++G + E L+ + Sbjct: 539 LLSDF-ESDIPDSGFDQTDRLAKSLAQSMAIKNGAVLHKEEQTELVNLLFSCKEPMLTPL 597 Query: 576 GRPTFIKLKLSDIEKLFG 593 R F+K SD +K F Sbjct: 598 NRLVFVKQSASDFDKKFM 615 >gi|108802890|ref|YP_642827.1| DNA mismatch repair protein MutL [Rubrobacter xylanophilus DSM 9941] gi|108764133|gb|ABG03015.1| DNA mismatch repair protein MutL [Rubrobacter xylanophilus DSM 9941] Length = 590 Score = 451 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 175/598 (29%), Positives = 297/598 (49%), Gaps = 13/598 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + Q+AAGE+++RP+ +KEL+EN+LDA +SR+E +A GG + + D+G Sbjct: 1 MGIKILDPTVAQQVAAGEVVDRPASVVKELVENALDAGASRIEVELAEGGTARILVRDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM E+ + V RH TSKI +D ++ T GFRGEALPSI +VS L++ G Sbjct: 61 SGMDPEDARLCVLRHATSKIRSVEDLESVSTLGFRGEALPSIASVSAFRLITST-GEGPG 119 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ + G + + P GT V V LF+ +PAR FLK + E + + + +A+A Sbjct: 120 TRVVVEGGSEARLSPATHPKGTTVLVDRLFYNVPARRAFLKGPRAERAAVVETLTHIAVA 179 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P+VSF S + + + ER++Q+ G + +S ++GY Sbjct: 180 HPEVSFRVSEGSREYLSLPAAA---DLLERLAQLHGVARARAMRRVEYESGAFRVEGYAA 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +P+ + V +NGR V+ + + AY T+P GRYP V L + +DPR+VDVN Sbjct: 237 LPSLTESSRAHQTVAVNGRWVRGDNLHRGLDDAYRATVPAGRYPPVALRISVDPRRVDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKTHLPK 357 VHP K +RF + R + +++ AI + + + + F Q+ P + + Sbjct: 297 VHPTKQLVRFSDERAAREAVAAAVRSAIEWRPPAPPAAPPRAPARGFAQERLGPPPRVAE 356 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 + + + +P + +P + Q+ Y Sbjct: 357 SRPAYRGSPPPDLRAVREEISRASRALPEPPPAAPEEPPGRGTLPDLRELRVIGQLGAGY 416 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 I+ + + L IVDQH AHER I +++R + + S LL PE+++L E + E Sbjct: 417 ILLEDPEALWIVDQHVAHERAILDRLRDAGSPAPVQS--LLVPEVVELSPAEAEVAAESL 474 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSK-KNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E+L G +AE FGP ++ + A L++ ++ L+D + I + + +DR I Sbjct: 475 EELAVYGFEAEPFGPRSLRVTAALASLAERGDVAGALKDALAAISGTEPGHRREDR---I 531 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LAT+AC+ +++ G ++ EM L+R+ + + C HGR ++ LS+I + R Sbjct: 532 LATIACHSAVKMGDRLSLQEMESLVRDWLGSRLPATCPHGRSICYRMSLSEIGRKMDR 589 >gi|253583594|ref|ZP_04860792.1| DNA mismatch repair protein mutL [Fusobacterium varium ATCC 27725] gi|251834166|gb|EES62729.1| DNA mismatch repair protein mutL [Fusobacterium varium ATCC 27725] Length = 642 Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats. Identities = 192/654 (29%), Positives = 319/654 (48%), Gaps = 80/654 (12%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L E + N IAAGE++E P+ +KEL+ENSLDAES ++ + GG+ I+D+G G Sbjct: 6 IKVLDESVSNIIAAGEVVENPASMLKELLENSLDAESKSIKIEVRSGGRHVI-ISDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 MT +++ ++V+RH TSKI+ +D N+ T+GFRGEAL SI AVS +TL SR + TG+ Sbjct: 65 MTQDDLLLSVERHATSKIAKKEDLYNLFTYGFRGEALSSISAVSKMTLSSRTKDDETGSA 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I +SG KI+ ++ + N GT +E++DLFF PARL FL+ E I D+I + A+ P Sbjct: 125 ITVSGGKITGLKEIQRNVGTTIEIKDLFFNTPARLKFLRKTTTEYMNIKDIIVQEALGNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + T ++ ++T I ++ G + + N+ + GY G Sbjct: 185 NTAITLILDDK----VSIKTTGNGIDNTIVEIFGRNVLKNSKPFSM--------GYLGNA 232 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + R + + F+NGR V+ K + + I Y + G+YP +L LEIDP++VDVNVH Sbjct: 233 SLYRATRDSIFTFVNGRMVKSKLLENAIIDGYYTKLMKGKYPFAILFLEIDPKEVDVNVH 292 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK-------------------- 340 P+K ++F N + I +++ I+ I S + K Sbjct: 293 PSKKIVKFSNESNIYGRVLKEIKNCFEGDDIFVSPTMEKTFEKENEALIDFSEFSKFVPM 352 Query: 341 -----MISSFHQDNAPKTHLPKYAT----------SLTNTQEKLFLQENRLSTNDLLPSD 385 + PKT + S + EK+F+++ R + ++ Sbjct: 353 KAENIKFEGIEVEKYPKTEREAEVSDRDIKKETTESNEDNFEKIFIEKGRTTPFEIKEEI 412 Query: 386 DPTYSEDNDPV-------------------------EESEATHYQLGIACAQIHQNYIIS 420 + + EE A QI ++I+ Sbjct: 413 KVFEGNEKSDIIKTDVVSEVKSEFKDEIKEDRIIVSEEKNAASKIDFKVFGQIFDSFILV 472 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 + I DQH HER+++EK+++++ T ++ Q LL P I L E LI E+ E Sbjct: 473 ERDGVFEIYDQHIVHERILYEKLKKEYYGTNVSRQQLLVPIRITLDPRERELIFENIEYF 532 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 G + + F N + IR +P + + + + ++II + ++ T D E+I+ +M Sbjct: 533 TGFGFEIDEFDENEVVIRSVPVMNFRDSTENIFKNIIKNLKENKET----DIRESIIISM 588 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C G+I++ K+ EM ++R++ + C HGRP +K+ L+D+EKLF R Sbjct: 589 SCKGAIKANEKLSLNEMETIIRKLHEIGE-YTCPHGRPIIVKITLNDLEKLFKR 641 >gi|303236772|ref|ZP_07323351.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella disiens FB035-09AN] gi|302482940|gb|EFL45956.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella disiens FB035-09AN] Length = 618 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 156/618 (25%), Positives = 284/618 (45%), Gaps = 35/618 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ +KEL+EN++DA ++ + +I G++ Q+ DNG G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELVENAIDAGATTINVIIVDAGRTSIQVVDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI +DD + T GFRGEAL SI AV+ + L +R G Sbjct: 65 MSETDARISFERHATSKIKKADDLFALTTMGFRGEALASIAAVAQIELKTRQETEEIGTL 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ISG K P + G+ +V +LFF +PAR FLKS+ E N I R+ + YP Sbjct: 125 LNISGSKFVGQEPCSCAVGSSFKVDNLFFNVPARRKFLKSDTTELNNIISSFERIVLVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SFT + + + +RI +V G+ + + + + + G+ G P Sbjct: 185 NISFTLHSNGVEIFSLRACG----LRQRIVEVFGKKLNQDLLPVEVSTTLCHIHGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + Y F+N R ++ + I TA+ +P G + ++ +DVN+H Sbjct: 241 ESAKKKGALQYFFVNDRYMKHPYFNKAIVTAFERLLPFGEQVPYFIYFQVPAENIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS---KKMISSFHQDNAPKTHLPK 357 P K+ I+F N I ++ ++++A+ K S K I F+ Sbjct: 301 PTKTEIKFENEQAIWQILMAAVKEALGKFNDIPSIDFDTEGKPDIPVFNPSANTNAPKVN 360 Query: 358 YATSLTNTQEKLFLQE----------------NRLSTNDLLPSDDPTYSEDNDPVEESEA 401 Y + +E + + + N +D+ + ES Sbjct: 361 YNPNYNPFKETQVGRNTIPADDWQTLYQNLGDDEMMPNATPRTDNNNGEQHIFTPSESGK 420 Query: 402 THYQLGIA-------CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 + + G Q YI++ GL+I+DQH AH R+++E + + + Sbjct: 421 SDLRSGNVAEERSPAHYQYKGCYIMTAVKSGLMIIDQHRAHVRILYELYLKQLKNHTAHT 480 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL PE+I +L+ + ++ +G G N+ A+ IP + +I L+ Sbjct: 481 QKLLFPEMITFPTHNVSLLEKVISEMKLMGFDLSNMGRNSYAVNGIPTGIEGLDISNLVG 540 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 ++++ ++ T ++ +++ ++A +I G+ + + EM ++ ++ N + Sbjct: 541 EMVNSALEEGVTVD-EEIKKSLALSLAKNAAIPHGQVLNNDEMENIVNQLFACSNVNYTP 599 Query: 575 HGRPTFIK-LKLSDIEKL 591 R + L+ DIEK+ Sbjct: 600 -NRKVILTILRQVDIEKM 616 >gi|182415852|ref|YP_001820918.1| DNA mismatch repair protein MutL [Opitutus terrae PB90-1] gi|238692919|sp|B1ZZY2|MUTL_OPITP RecName: Full=DNA mismatch repair protein mutL gi|177843066|gb|ACB77318.1| DNA mismatch repair protein MutL [Opitutus terrae PB90-1] Length = 628 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 189/627 (30%), Positives = 308/627 (49%), Gaps = 39/627 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K+R LS+++ NQIAAGE+IERP+ +KEL+EN+LDA ++R+E GG+S ++ DNG Sbjct: 3 KVRILSDRVANQIAAGEVIERPAAVVKELVENALDAGATRIEVEFRHGGRSLMRVEDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ ++ +A++RH TSKIS+ D + ++GFRGEALPSI +VS L +R N G Sbjct: 63 GMSRDDALLALERHATSKISEAADLDRLGSYGFRGEALPSIASVSRFELQTREAGQNVGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ +SG K+ VR GT +EV LF ++PAR FLKS+Q E I +R A+A Sbjct: 123 EVLVSGGKLVHVRDCGRPVGTRIEVAQLFNSVPARRKFLKSDQTEAAHIVQCVRLYALAC 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +F+ ++ T ERI+++ G + V + + + L G G Sbjct: 183 PGTAFSLIEDGRVIFRSPECPT---LAERIAEIFGRQTAESLVPIESVESGMRLGGLIGR 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P RG ++ VF+N R V + + + +Y E++P GRYP+ + E DP VDVNV Sbjct: 240 PGVGRGTRHEMIVFVNQRPVDSRTLNYALIESYYESVPKGRYPLAFVFFECDPAAVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKG------ISTSSVLSKKMISSF------HQ 347 HPAK +RFRN +R+F+I+S+ + + + S+ K S + Sbjct: 300 HPAKREVRFRNEPAVRSFVIRSVLQRLREIADHRSDFAQPSADNMPKPESPGAPAAHGRK 359 Query: 348 DNAPKTHLPKYA-----------TSLTNTQEKLFLQENRL-----------STNDLLPSD 385 D+AP H A T+ + +L+++ +P+ Sbjct: 360 DDAPAAHAEGRAATPLAAGNLIVTARFGAESTPYLEKSGAIAGARPAGVLPPAVPRIPAA 419 Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 + V H NY + +TT GL+++D+ AAHER+ FE++++ Sbjct: 420 PMPVNAGAAAVPAPLKPASPSWRFVGLAHGNYALFETTAGLILLDRRAAHERVWFERLQE 479 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 F S + SQ LL P ++L AL+++ + L+ G + FG N I +PA + Sbjct: 480 QFRSGAVPSQRLLLPVPVELDPIAAALLLDRVQFLNAHGFEIAEFGRNFFRIEAVPAWME 539 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 + LRD++ + + LA +A ++R E+ L+ + Sbjct: 540 PADAEPFLRDLLGAFREGHWPDRDANLAREELARLASVKAVRLPAVTGEQELRALVTHLF 599 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLF 592 GRPT+I+L +++ + F Sbjct: 600 ATRTPMTNPAGRPTYIELNHAELARRF 626 >gi|150003015|ref|YP_001297759.1| DNA mismatch repair protein mutL [Bacteroides vulgatus ATCC 8482] gi|254883663|ref|ZP_05256373.1| DNA mismatch repair protein mutL [Bacteroides sp. 4_3_47FAA] gi|294775650|ref|ZP_06741158.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides vulgatus PC510] gi|319642199|ref|ZP_07996859.1| DNA mismatch repair protein mutL [Bacteroides sp. 3_1_40A] gi|167017337|sp|A6KXH3|MUTL_BACV8 RecName: Full=DNA mismatch repair protein mutL gi|149931439|gb|ABR38137.1| DNA mismatch repair protein mutL [Bacteroides vulgatus ATCC 8482] gi|254836456|gb|EET16765.1| DNA mismatch repair protein mutL [Bacteroides sp. 4_3_47FAA] gi|294450494|gb|EFG18986.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides vulgatus PC510] gi|317386185|gb|EFV67104.1| DNA mismatch repair protein mutL [Bacteroides sp. 3_1_40A] Length = 622 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 165/634 (26%), Positives = 285/634 (44%), Gaps = 59/634 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + NQIAAGE+I+RP+ IKEL+EN++DA + V+ ++ GK+ Q+ D+G G Sbjct: 5 IRLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGAQHVDVLVVDAGKTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D +HT GFRGEAL SI AV+ + L +R G Sbjct: 65 MSETDARLSFERHATSKIREAADLFALHTMGFRGEALASIAAVAQVELRTRMEGEELGTM 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ISG K+ V+ G+ V++LFF +PAR FLKS Q E + I R+ + P Sbjct: 125 LTISGSKVEGQEAVSCPKGSSFSVKNLFFNVPARRKFLKSNQTELSNILTEFERIVLVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +VSFT + + + +RI V G+ + L+ + + + G+ G P Sbjct: 185 EVSFTLHHNGAELFNLPAL----QLRQRIMGVFGKKINQELLSLDVDTTMVRVSGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + Y F+NGR ++ + I AY + +P+G + E+DP +DVN+H Sbjct: 241 ETARKKGARQYFFVNGRYMRHPYFHKAIMDAYEQLVPVGEQVSYFIYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS------------------KKMI 342 P K+ I+F N I + ++++ + K S + Sbjct: 301 PTKTEIKFENEQAIWQILAAAVKETLGKFNAVPSIDFDTEGMPDIPAFDASPYTGIQPPK 360 Query: 343 SSFHQDNAP---KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 ++++ D P P + + E+L+ R +++ D+ Y + E Sbjct: 361 TTYNPDYNPFNVSAAPPSSYSKPSKDWEQLYAGLERHASSQNFHPDENDYRAEEASPAEE 420 Query: 400 EATHYQL---------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 Y Q +I++ GL+I+DQ AH R++++K + Sbjct: 421 NPGLYDHVEDSSVSEKSGQHYQFKGRFILTSVKSGLMIIDQQRAHIRILYDKYIDQISRR 480 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 + SQ +L P+I+ E A++ E EDL LG + G + AI +PA + N Sbjct: 481 QGVSQGMLFPDIVQFPLSEVAILQEIMEDLSFLGFELTDLGGGSYAINGVPAGIEGLNPI 540 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS-----------GRKMQSIEMNR 559 L+++++ ++ + + SI + G+ + + EM Sbjct: 541 DLIQNMVHTAMEKGGKVKEEVQ------------SILALTLAKAAAIVPGQVLTNEEMTG 588 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 L+ + + G+ + D+EKLF Sbjct: 589 LVDGLFAVATPNYTPDGKTVLSVINEDDLEKLFK 622 >gi|162447739|ref|YP_001620871.1| DNA mismatch repair protein [Acholeplasma laidlawii PG-8A] gi|161985846|gb|ABX81495.1| DNA mismatch repair protein [Acholeplasma laidlawii PG-8A] Length = 570 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 159/597 (26%), Positives = 274/597 (45%), Gaps = 33/597 (5%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 MK I + + N IAAGE++ERP+ IKEL+EN++DAE+ + + G +TD+ Sbjct: 2 MKNIAIMDMALANTIAAGEVVERPASVIKELVENAIDAEAKNISIEVHNMGLESISVTDD 61 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GMT E + A RH TSKI D ++I + GFRGEALPSI +VS + +MSR Sbjct: 62 GSGMTRENLHKAFLRHATSKIFKISDLNDIRSLGFRGEALPSILSVSKIEIMSRT-DAGD 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + + K+ +N GT + V++LF+ PAR ++KSE E N IT+++ ++A+ Sbjct: 121 GYFLKLENSKVVDEGVAVLNKGTKIIVKELFYNTPARFKYMKSEYAEKNAITEIVDKLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P +SF N + I + G+ L+ +I + Y Sbjct: 181 SHPTISFKLYMDNKLVKSTL---GNNQMNQLIEAIYGKKITEGMKVLSTYLGKIKVDAYL 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F R + +FIN R +++ I +I Y + +YP+ +L + +DP VDV Sbjct: 238 VDPKFVRSKRSDINIFINQRYIKNYVISQSIIDGYQTFLMTNKYPLCLLYITLDPSLVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K + N + + I+K + + ++ I+ +D T + Sbjct: 298 NVHPQKMEAKLANERMFAYQLAPEIRKTLESGNMP-----IRQAITEVRKDLFKPTIIDI 352 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 + + + N + L E + Y Sbjct: 353 FDFVKQEDLPEQLFELNEAPVVESLIV---------------ETEKLPHLEYIGTLSGTY 397 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 ++ Q +GL ++DQHAA ER+ +E + K LL + + + E + ++ H Sbjct: 398 LLYQNDEGLFLMDQHAAAERIRYEYYEDKVGALKSDYYELLVAKDLHITEQDALILHTHR 457 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 L +G + E + + P L + + + + ++D++ D+ L+ + Sbjct: 458 HLLKHIGFEFENAS-----VVKHPTWLRENELDKAVHALVDQLQDNGKID-LKILRNQLA 511 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC G+I++ R++ E+ ++ ++ + N C HGRP IKL DIEK+F R Sbjct: 512 KDIACKGAIKANRQLSLQEIKKIENDLRQCKNPYTCPHGRPVLIKLSNQDIEKMFKR 568 >gi|297569308|ref|YP_003690652.1| DNA mismatch repair protein MutL [Desulfurivibrio alkaliphilus AHT2] gi|296925223|gb|ADH86033.1| DNA mismatch repair protein MutL [Desulfurivibrio alkaliphilus AHT2] Length = 642 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 178/642 (27%), Positives = 299/642 (46%), Gaps = 51/642 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + NQIAAGE++ERP+ +KEL+EN++DA + + + G +++D+G Sbjct: 3 RIRVLPENLANQIAAGEVVERPASVVKELLENAVDAGARNISVQVEGRAVGLLRVSDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++++ +A++RH TSKI+D + I T GFRGEALPSI +V+ L L SRP + G Sbjct: 63 GMDADDLLLALERHATSKIADAEGLAAISTLGFRGEALPSIASVARLLLSSRPQGADLGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + + V+ GT+VEVRDLF +PAR FLKS + E + + ++ +A+ Sbjct: 123 LVEVRFGTVRRVQETGAAQGTVVEVRDLFANVPARRKFLKSPRTELYHVEECVKNCGLAF 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ----G 235 P + + + + RI +++G+ V + E + G Sbjct: 183 PGLGLHYQVDGRTVLQWPA--GVDDAAGRIRRLLGKRGELELVPVGEPGEGTVSEPVVTG 240 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 P + +F+NGR V+D+ + + + GR P VL L +DP V Sbjct: 241 LLLTPEETPATGARLRLFVNGRPVRDRMLSHAVAEGLHHQLLRGRQPAGVLFLRVDPATV 300 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHP K IRFR + + + +++KA+ S L ++ + AP+ Sbjct: 301 DVNVHPTKQEIRFRQSGQVHDAVRAAVRKAVELHEQEKSRRLFGSAGAAVRKPPAPEAGQ 360 Query: 356 PKYATSLT------------------------------------NTQEKLFLQENRLSTN 379 A N+ E + Sbjct: 361 RAPAAESAAQGRLFRSATAAGGSVAPAAALGAASPSPPETVLAINSAEAPGDYPSSAVAQ 420 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLG------IACAQIHQNYIISQTTDGLVIVDQHA 433 +P + + G Q+ +YII T DG++ +DQHA Sbjct: 421 PPPAVAEPPAPPIAPEPRAAASPAIACGLEDAAPQLLGQVLHSYIICATADGMLAIDQHA 480 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 AHERL++E++ +N + Q LL P +++ E A++ ++ RLG+ E FG + Sbjct: 481 AHERLLYERLLAQYNERGLARQALLFPAVLECSPAEAAVLEARGGEIARLGLGIETFGGH 540 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD-RIENILATMACYGSIRSGRKM 552 + I+ +PA+L+ + ++L ++ +D T D R+E +LA MAC ++++G+ + Sbjct: 541 SYLIKAVPALLASHSPTEILAGVLSRYLDDGTNRGGGDGRLEAVLAGMACKAAVKAGQVL 600 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EM LL+EM+ S+C HGRP ++E+ F R Sbjct: 601 APAEMQGLLKEMQGAGIFSRCPHGRPVVRHFGARELERWFNR 642 >gi|124514220|gb|EAY55735.1| DNA mismatch repair protein MutL [Leptospirillum rubarum] Length = 634 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 170/634 (26%), Positives = 290/634 (45%), Gaps = 44/634 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L + +++QIAAGE+IERP+ +KEL+ENSLDA S ++ I GG+ ++DNG Sbjct: 3 RIHELPKIVVDQIAAGEVIERPASVVKELVENSLDAGSGKISVYIEEGGRKSIIVSDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A +RH TSKI DD T GFRGEAL SI +VSH+ L SR TG Sbjct: 63 GIYPDDVGLAFRRHATSKIQSVDDLLLTRTLGFRGEALSSISSVSHVRLRSRTRDLETGV 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++S + + +PGT +EVRDLF +P RL FLKS E + I + I +A+ + Sbjct: 123 EYSVSPGQEGILTDWTGSPGTTIEVRDLFHNLPVRLKFLKSASTEQSQIQETITLLALGH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V F S ++ + + + E ++ AV + I ++ Sbjct: 183 PEVQFHLSVNGRTSLALSTRDDRRLRLLDLYPGLEEKDLSRAV---LEGEGIRVEALVLT 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P NR + VF+N R ++ +L I A I +P + +E+ P +VDVNV Sbjct: 240 PDKNRKDRKYQNVFLNRRWIRHPGLLQAISQGAAGRIHKDVHPGAWIWIEMVPDKVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSI----QKAINKKGISTSSVLSKKMI------------- 342 HP K +RF + + + + + +N + + Sbjct: 300 HPTKREVRFLETDRLFSLVRRVVSEGLDSFLNGSRTDPENTFGDALPERRVSSGIFPDMV 359 Query: 343 -------SSFHQDNAPKTHLPKYATSL------TNTQEKLFLQENRLSTNDLLPSDDPTY 389 SSF ++ + S + FL + S + P + Sbjct: 360 MESLSDRSSFRSEHPSGGERGQSRESSAERVPGAPDPRRPFLGISTPSARKKRVAHHPEF 419 Query: 390 SEDNDPVE---------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 + ++ + E Q + +I++ LVI+DQH AHER+ + Sbjct: 420 QSLPELLKSLPPPPFSFQQEDLEDLEIRILTQTYGTFILAFLGQELVIIDQHTAHERIRY 479 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 + R+ K++ L P+ + + E + E ++L LG + GP ++ + I Sbjct: 480 DSFRKGLAQGKMSMLPYLFPQTVRMTAREVENLEERVDELAHLGFDVDIQGPESVRVSGI 539 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 PA+L ++ LL+++ + DRI+ L T++C+ SIR+ + ++ R+ Sbjct: 540 PALLEGEDSASLLQELSESSQGFEFPLVRSDRIDETLMTLSCHTSIRANHSLGKEDLGRI 599 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +R + + C HGRPT + L + +EK F R Sbjct: 600 VRMLLRTEYPFSCPHGRPTILSLSPNVLEKWFHR 633 >gi|189183683|ref|YP_001937468.1| DNA mismatch repair protein MutL1 [Orientia tsutsugamushi str. Ikeda] gi|189180454|dbj|BAG40234.1| DNA mismatch repair protein MutL1 [Orientia tsutsugamushi str. Ikeda] Length = 680 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 209/676 (30%), Positives = 353/676 (52%), Gaps = 84/676 (12%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS+ IN+IAAGE++ERP+ +KEL+ENS+D+ + +V+ + GK+ ++DNG G Sbjct: 4 IKYLSDTTINRIAAGEVVERPASVVKELVENSIDSGAMKVDITLEKSGKNLIIVSDNGCG 63 Query: 63 MTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 M++E++ A++RH TSK+++ D NI+TFGFRGEALPSI +VS + ++++ ++ +I Sbjct: 64 MSAEDLETAIERHTTSKLNENDIMNINTFGFRGEALPSIASVSRMRIVTKSKLHDQAYEI 123 Query: 122 AIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + + P GT +EVRDLFF PARL FL+S++ E + DV++R+AI+Y Sbjct: 124 NVHGGVKTKINSLPQLQLTGTKIEVRDLFFATPARLKFLRSDRTEYIVCYDVVKRLAISY 183 Query: 180 PKVSFTFSTIKSNRYKMNFQST---NGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 P ++F+ K+ S + RIS+++ ++FI+NA+ + + +E+++ G+ Sbjct: 184 PHIAFSLVHDDKTILKLKASSQLSFDDARKSRISEILSKNFIDNAISIGIERDELSITGF 243 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 +PT+N+ +A +F+N R V+DK +++ IR AY + RYPVVV+ + + P VD Sbjct: 244 VSVPTYNKASAEDQLLFVNNRPVKDKLLMTAIRLAYQGVLARERYPVVVIFISVAPHFVD 303 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAI----NKKGISTSSVLSKKMISSFHQDNAPK 352 VNVHP KS +RF + +++R II +I++A+ +S +K M + D + K Sbjct: 304 VNVHPTKSEVRFHDSSLVRGIIISAIKQALLNTSQLVSSIAASDANKYMKPQYDTDISEK 363 Query: 353 THLPK------------------------YATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 L K + + Q + +N + + + Sbjct: 364 LELSKDIKNIQQFPLQELVNNFSKDFNVNLKSEFQDIQANNLVSDNEQQKIESTTENIKS 423 Query: 389 YSEDND--------------------------PVEESEATHYQLGIACAQIHQNY----- 417 +S N + +E +++ ++ Sbjct: 424 FSAFNQLGGNTESNQHMSILDDDKTKDDIIARNIATNEKVDVNKQENIQKLNDSFCNNFG 483 Query: 418 IISQTTDGLVIVDQH------------------AAHERLIFEKMRQDFNSTKITSQTLLT 459 Q GL H AAHER+ +E +R F + +I Q LL Sbjct: 484 DSYQLPLGLACAQFHGNYILAQTVDSLIIVDQHAAHERITYENLRSQFQAGQIIRQRLLM 543 Query: 460 PEIIDLLE-GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P+++ L + + + +++ LG+ ER G + + E+PAIL +I ++ D+ D Sbjct: 544 PQVVILPDIVRVEKLCDKMQEILALGMGFERCGDVQVKVFEMPAILQSVDIEAVVNDVAD 603 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + L D +E IL + +CY SIRSGR + EMN LLR++E P S QCNHGRP Sbjct: 604 YLLTTDDHILLADMVEKILQSYSCYHSIRSGRILTIAEMNSLLRQIETTPFSGQCNHGRP 663 Query: 579 TFIKLKLSDIEKLFGR 594 T+++ +L DIEKLFGR Sbjct: 664 TYVRFELKDIEKLFGR 679 >gi|153809079|ref|ZP_01961747.1| hypothetical protein BACCAC_03387 [Bacteroides caccae ATCC 43185] gi|149128412|gb|EDM19631.1| hypothetical protein BACCAC_03387 [Bacteroides caccae ATCC 43185] Length = 633 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 164/634 (25%), Positives = 291/634 (45%), Gaps = 48/634 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DA++ V ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNVHVLVTDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIREAADLFALRTMGFRGEALASIAAVAQVELKTRPESEELGTK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G K+ S V+ + G+ +++LFF IPAR FLK+ E + I R+A+ +P Sbjct: 125 LVIAGSKVESQEAVSCSKGSNFSIKNLFFNIPARRKFLKANSTELSNILAEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + S + + +RI + G+ + + + + + GY P Sbjct: 185 EVAFSLYSNDSELFNLPVSP----LRQRIMAIFGKKLNQQLLNIEVNTTMVKISGYVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + IP+G + E+DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMDAYEQLIPVGEQISYFIYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + ++++++ K S I +F Q+ + + Sbjct: 301 PTKTEIKFENEQAIWQILSAAVKESLGKFSAIPSIDFDTEDMPDIPAFEQNLSSAPPTVQ 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDD-----PTYSEDNDPVEESEATHYQ------- 405 Y + + + + +D S+ N+P E E Sbjct: 361 YNSDYNPFKVSAGGGGGGAYSRSKVDWEDLYGGLTKASKMNNPQPEPEMDWEDSSMGGES 420 Query: 406 --------------------------LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 G Q +I++ GL+++DQH AH R++ Sbjct: 421 AVMEERTETVMSAASSTLYASEPVIEKGNQHLQFKGRFILTSVKSGLMLIDQHRAHIRVL 480 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 F++ + SQ +L PEI+ L E A++ +DL +G G + AI Sbjct: 481 FDRYMVQIQQKQGVSQGVLFPEILQLPASEAAVLQSIMDDLSAVGFDLSDLGGGSYAING 540 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 IP+ + N +L+R+++ ++ ++ + T+A +I G+ + + EM Sbjct: 541 IPSGIEGLNPVELVRNMLHTAMEKGN-DVKEEVQNILALTLARAAAIVYGQVLSNEEMVS 599 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 L+ + P+ + G+ +K DIE+LF Sbjct: 600 LVDSLFACPSPNYTPDGKTVLTTIKEEDIERLFK 633 >gi|88604448|ref|YP_504626.1| DNA mismatch repair protein MutL [Methanospirillum hungatei JF-1] gi|88189910|gb|ABD42907.1| DNA mismatch repair protein MutL [Methanospirillum hungatei JF-1] Length = 599 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 158/598 (26%), Positives = 286/598 (47%), Gaps = 13/598 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDNG 60 I+ L E ++ IAAGE+++RP +KEL+EN++DA SSR+ ++ G S +ITD+G Sbjct: 8 IQVLDESTVHLIAAGEVVDRPVSIVKELVENAIDAASSRITVELSTAHGVISRIRITDDG 67 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ S+++ +A H TSKI +D + T GFRGEAL SI AVS++T++++P +++T Sbjct: 68 VGIPSDQVRIAFLAHATSKIRTGEDLLSCRTLGFRGEALASIAAVSYVTMITKPKESDTA 127 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I+G ++ GT + V ++FF PAR FLKS Q E IT ++ A Sbjct: 128 ILFRITGGEVVECTETGAPNGTSITVEEVFFNTPARRKFLKSLQTEVAHITSLLESFACL 187 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 YP ++F + ++ + + + + D + + + + G Sbjct: 188 YPGITFRYLVNGIEKFSTH---GGSDLSDIFRALYPSD-AGMMIPIRGRDGNTLVTGLIS 243 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +P + N + + +NGR VQ ++S ++ AY IP +PV VL+LEI P +VD N Sbjct: 244 LPKLVKQNRQRLLIAVNGRLVQSPAMVSAVKRAYGSLIPGNVWPVAVLMLEIPPAEVDAN 303 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-SSVLSKKMISSFHQDNAPKTHLPK 357 +HP K +RF I + ++++++ A++ + + + S +P + Sbjct: 304 IHPTKREVRFSAERTILDLLVRTVRLALDDANLLDLPAAADEDAQISLSDIPSPAPAPIR 363 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 Y + + T +++ + Q+ Y Sbjct: 364 YGAVAAAPVSRQVCEATLSGYRTTSRQLLQTRLQESADDATVRDERFPELFWIGQVGGTY 423 Query: 418 IISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 I++ G L ++DQHAAHER+ +++++ S + +Q L+ P ++ L E LI Sbjct: 424 IVASDKTGALFLIDQHAAHERVRYDQLK-QQESLHLKTQELIAPVVLTLSPSEAGLIPSV 482 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L G E FG + +R +P +L + P+ +R+II I+ E + Sbjct: 483 LPVLTDEGFIIEPFGQDTWCVRGVPVVLGRYEDPETVREIIGTILSEDEGPVR--LKEQV 540 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L +AC ++++G + + ++ ++ + + C HGRPT I ++ K+F R Sbjct: 541 LRLVACRSAVKAGAVLTPEQGMDIINQLSQTADPWTCPHGRPTIISFSCQELGKMFKR 598 >gi|189502520|ref|YP_001958237.1| hypothetical protein Aasi_1174 [Candidatus Amoebophilus asiaticus 5a2] gi|189497961|gb|ACE06508.1| hypothetical protein Aasi_1174 [Candidatus Amoebophilus asiaticus 5a2] Length = 628 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 188/626 (30%), Positives = 318/626 (50%), Gaps = 41/626 (6%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R L + + NQIAAGE+I+RP+ +KEL+EN++DA S+ ++ VI GK+ Q+ D+G GM Sbjct: 7 RLLPDSLANQIAAGEVIQRPASVVKELVENAVDAASTHIKVVIKDAGKTLIQVIDDGIGM 66 Query: 64 TSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + M++++H TSKIS DD NI T GFRGEALPSI A++ + + +R G ++ Sbjct: 67 SEVDARMSLEKHATSKISQADDLFNIRTMGFRGEALPSIAAIAQVEIETRTEDAELGTRL 126 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 + G KI PVA GT + V++LFF +PAR NFLKSE VET I + + +A+A P Sbjct: 127 VVEGSKIKLQEPVATTKGTTISVKNLFFNVPARRNFLKSEPVETKHIIEEFQHIALARPD 186 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 +SF+ + Y + RI + GE + + E ++ I + GY G P+ Sbjct: 187 ISFSLYQNEQETYHLPAT----KLANRIVHLFGETYKKQLIPCQEGTDIIQIHGYVGNPS 242 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 + + + + F+N R ++ ++ +++A+ E IP +P VL +EI P ++DVNVHP Sbjct: 243 YAKKTRGEQFFFVNNRFIKSTYLHHAVKSAFEELIPKDTFPFYVLFIEISPERIDVNVHP 302 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK--------- 352 K+ I+F + ++ + + S+++A+ P+ Sbjct: 303 TKTEIKFDDERMVYSILQASVRQALAHHTTPAFDFEQNINCDPLGLQEQPRQKSFTTSTD 362 Query: 353 ---THLPKYATSLTNTQE----------------KLFLQENRLSTNDLLPSDDPTYSEDN 393 + K+ N QE + Q+ +L + + S S Sbjct: 363 RAYSSFKKFDNPSVNQQEWEQLFQRINVDTDSTTPIHGQQAQLLDLENMLSTVNEVSSMA 422 Query: 394 DPVEESEATHYQLGI-----ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 E + A Q+H YI++ GL++++QHAAHER+++EK + Sbjct: 423 TMQENIQPFSMLTHEGTDTAAKMQLHATYILASVKSGLLLINQHAAHERILYEKYIEHLQ 482 Query: 449 S-TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + TSQ LL P I+L + ALI +++ L LG E FG N+I + PA ++ Sbjct: 483 NHHAGTSQQLLFPHQIELNPADFALIQDYEGTLGTLGFAIEDFGKNSIILVGYPAEAAQH 542 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 N QLL DI+++I + + +L EN +A + +I+ G+K+ +E++ L+ ++ Sbjct: 543 NPKQLLEDILEQIKWNKSHLSLP-IQENAARALAKHAAIQPGKKLTMVEIDSLVDQLFAC 601 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFG 593 NS+ GR ++ + L ++ L Sbjct: 602 KNSTHAPDGRRIWVIITLEELASLLK 627 >gi|329957333|ref|ZP_08297853.1| DNA mismatch repair protein [Bacteroides clarus YIT 12056] gi|328523046|gb|EGF50149.1| DNA mismatch repair protein [Bacteroides clarus YIT 12056] Length = 631 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 166/630 (26%), Positives = 287/630 (45%), Gaps = 45/630 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DAE+ + +I GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAGEIHVLITDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIREASDLFALRTMGFRGEALASIAAVAEVELKTRPADEELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G K+ S V+ G+ V++LFF IPAR FLK+ E + I R+A+ +P Sbjct: 125 LVIAGSKVESQEAVSCPKGSNFSVKNLFFNIPARRKFLKANSTELSNILTEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+F + + + + +RI V G+ + ++ + I + G+ P Sbjct: 185 DVAFYLYSNDTELFNLPVMP----LRQRILAVFGKKLNQQLLSVDVDTTMIKVSGFVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +R Y F+NGR ++ + + AY + IP G + E+DP +DVN+H Sbjct: 241 ETSRKKGAHQYFFVNGRYMRHPYFHKAVMDAYEQLIPAGEQISYFIYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS---KKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + ++++++ K S I +F Q + Sbjct: 301 PTKTEIKFENEQAIWQILSAAVKESLGKFNAVPSIDFDTEGMPDIPAFEQSRPIEPPKVH 360 Query: 358 YATSLTN--------------------TQEKLFLQENRLSTNDLLPSDDPTY-------- 389 Y E L+ + S + + + Sbjct: 361 YNADFNPFKTSSASSYGGGGNYSRQSVEWEGLYSGLEKASKMNEPVMAEEPFDFGETASA 420 Query: 390 -------SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 S + + E + + G Q +I++ GL+++DQH AH R++F++ Sbjct: 421 VAEPVAASSQSSLLYSGEPSSMEKGAQHLQFKGRFILTSVKSGLMLIDQHRAHIRVLFDR 480 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 + SQ +L PE+I L E A++ +DL +G G + AI IP+ Sbjct: 481 YMNQIRQKQGVSQGVLFPEMIQLPASEAAVLESLSDDLAAVGFDLSPLGGGSYAINGIPS 540 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 + N +L+R+++ ++ ++ + T+A +I G+ + + EM+ L+ Sbjct: 541 GIEGLNPVELVRNMVHTAMEKGN-DVKEEVRTILALTLARAAAIVYGQVLSNDEMSNLVD 599 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 + + GR +K DIEKLF Sbjct: 600 SLFACSTPNYTPDGRTVLATIKEEDIEKLF 629 >gi|160882395|ref|ZP_02063398.1| hypothetical protein BACOVA_00344 [Bacteroides ovatus ATCC 8483] gi|293369507|ref|ZP_06616086.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|299148151|ref|ZP_07041213.1| DNA mismatch repair protein MutL [Bacteroides sp. 3_1_23] gi|156112208|gb|EDO13953.1| hypothetical protein BACOVA_00344 [Bacteroides ovatus ATCC 8483] gi|292635392|gb|EFF53905.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides ovatus SD CMC 3f] gi|298512912|gb|EFI36799.1| DNA mismatch repair protein MutL [Bacteroides sp. 3_1_23] Length = 633 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 161/634 (25%), Positives = 291/634 (45%), Gaps = 48/634 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DA++ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIREAADLFALRTMGFRGEALASIAAVAQVELKTRPESEELGTK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G ++ S ++ + G+ V++LFF +PAR FLK+ E + I R+A+ +P Sbjct: 125 LVIAGSQVESQEAISCSKGSNFSVKNLFFNVPARRKFLKANSTELSNILAEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + S + + +RI + G+ + ++ + + + GY P Sbjct: 185 EVAFSLYSNDSELFNLPV----SQLRQRILAIFGKKLNQQLLNIDVNTTMVKISGYVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + IP G + ++DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMEAYEQLIPAGEQISYFIYFDVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + S+++++ K S I +F + + + Sbjct: 301 PTKTEIKFENEQAIWQILSASVKESLGKFSAIPSIDFDTEDMPDIPAFEEKISSEPPKVH 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDD-----PTYSEDNDPVEESEATH--------- 403 Y T + + + +D S+ N+P E E Sbjct: 361 YNTDYNPFKVSAGGGGGGSYSRSKVEWEDLYGGLTKASKMNNPQPEPEMDWEDSSIGGEP 420 Query: 404 ------------------------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 + G Q +I++ GL+++DQH AH R++ Sbjct: 421 AFVEEKIETVTSAASSTLYANEPVMEKGNQHLQFKGRFILTSVKSGLMLIDQHRAHIRVL 480 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 F++ + SQ +L PEI+ L E A++ +DL +G G + AI Sbjct: 481 FDRYMVQIQQKQGVSQGVLFPEILQLPASEAAVLQSIMDDLSAVGFDLSNLGGGSYAING 540 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 IP+ + N +L+R+++ ++ ++ + T+A +I G+ + + EM Sbjct: 541 IPSGIEGLNPVELVRNMLHTAMEKGN-DVKEEIQNILALTLARAAAIVYGQVLSNEEMVS 599 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 L+ + P+ + G+ +K DIE+LF Sbjct: 600 LVDNLFACPSPNYTPDGKTVLTTIKEEDIERLFK 633 >gi|237736846|ref|ZP_04567327.1| DNA mismatch repair protein mutL [Fusobacterium mortiferum ATCC 9817] gi|229420708|gb|EEO35755.1| DNA mismatch repair protein mutL [Fusobacterium mortiferum ATCC 9817] Length = 641 Score = 448 bits (1152), Expect = e-123, Method: Composition-based stats. Identities = 187/651 (28%), Positives = 320/651 (49%), Gaps = 76/651 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L E + N IAAGE++E P+ IKEL+ENSLDAES + + GG+ I D+G Sbjct: 8 KIKILDESVSNIIAAGEVVENPASMIKELLENSLDAESKSIRIEVKNGGRD-VAIIDDGV 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ +++ ++++RH TSKIS DD N++T+GFRGEAL SI AVS +++ SR ++ G+ Sbjct: 67 GMSQDDLLLSIERHATSKISKKDDLYNLYTYGFRGEALSSISAVSKMSISSRVEESEVGS 126 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + G K++S++ V N GT +E+++LFF PARL FL+ E I D+I + A++ Sbjct: 127 QITVLGGKVTSLKDVQRNRGTTIEIKELFFNTPARLKFLRKPSTEYINIKDIIIQEALSN 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ ++ +++ I ++ G++ + N + GY G Sbjct: 187 PDVAIMLILDGK----VSIKTSGNGLDNAIVEIFGKNVLKNMKKFKL--------GYLGN 234 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + + F+N R V+ K + S + Y + G+YP ++ L+I+P+ VDVNV Sbjct: 235 GAIYRSTKDSIFTFVNNRMVKSKIVESAVIDGYYTKLMKGKYPFAIIFLDINPKDVDVNV 294 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM---------ISSFHQDNA 350 HP+K ++F + + N++++ I+K + S L +K+ S F + Sbjct: 295 HPSKKIVKFADEEEVYNYVLKEIEKTFARDDDFVSPTLQEKIEKEESKFLDFSEFEKFTP 354 Query: 351 PKTHLPKYAT---------------------------------------SLTNTQEKLFL 371 K+ ++ ++++ Sbjct: 355 MKSEPQQFQELLEEEKDIEEEIFGEKREKLQEKDILREEFEEKKEYEVIEDKRIEKEIVR 414 Query: 372 QENRLSTNDLLPSDDPTYSEDNDPVEESE--------ATHYQLGIACAQIHQNYIISQTT 423 +EN + + + V+ SE + Q+ +I+ + Sbjct: 415 EENIEFNTESSSKNKIPLDIYEEKVKTSEITVKKVEEKSKKIEFRVIGQVFGTFILVERD 474 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 I DQH HER+++EK++ + TK++ Q LL P I + E LI E +E+ + Sbjct: 475 GVFEIYDQHIVHERILYEKLKAQYYGTKVSMQQLLVPIRILVDPRERELIFEEEENFTKA 534 Query: 484 GIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY 543 G + +RF N I IR +P + + +I + R+I+ I ++ D E+IL +M+C Sbjct: 535 GFEIDRFSDNEILIRAVPMLDLRDSIENIFREILKNIKENRNI----DIRESILISMSCK 590 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 G+I++ K+ EM R++RE+ + C HGRP K+ D+EKLF R Sbjct: 591 GAIKANEKLNHEEMERIVRELHEIGE-YTCPHGRPIITKITRDDLEKLFKR 640 >gi|237714324|ref|ZP_04544805.1| DNA mismatch repair protein mutL [Bacteroides sp. D1] gi|262408157|ref|ZP_06084704.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294645117|ref|ZP_06722842.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294809731|ref|ZP_06768418.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] gi|229445488|gb|EEO51279.1| DNA mismatch repair protein mutL [Bacteroides sp. D1] gi|262353709|gb|EEZ02802.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639541|gb|EFF57834.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides ovatus SD CC 2a] gi|294443065|gb|EFG11845.1| DNA mismatch repair protein, C-terminal domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 633 Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 165/645 (25%), Positives = 289/645 (44%), Gaps = 70/645 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DA++ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIRQAADLFALRTMGFRGEALASIAAVAQVELKTRPESEELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G ++ S V+ + G+ V++LFF +PAR FLK+ E + I R+A+ +P Sbjct: 125 LVIAGSQVESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTELSNILAEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + S + + +RI + G+ + + + + + GY P Sbjct: 185 EVAFSLYSNDSELFNLPV----SQLRQRILAIFGKKLNQQLLNIEVNTTMVKISGYVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + IP G + ++DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMEAYEQLIPTGEQISYFIYFDVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + S+++++ K S I +F + + + Sbjct: 301 PTKTEIKFENEQAIWQILSASVKESLGKFSAIPSIDFDTEDMPDIPAFEEKMSSEPPKIH 360 Query: 358 YATSLTN------------------TQEKLF------LQENRLSTNDLLPSDDPTYSEDN 393 Y T E L+ + N + +D + Sbjct: 361 YNTDYNPFKVSAGGGGGGSYSRSKVEWEDLYGGLTKASKMNNPQPEPEMDWEDSSIGGQP 420 Query: 394 DPVEE--------------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 VEE + + G Q +I++ GL+++DQH AH R++ Sbjct: 421 TFVEEKMETVTSAASSTLYASEPVIEKGNQHLQFKGRFILTSVKSGLMLIDQHRAHIRVL 480 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 F++ + SQ +L PEI+ L E A++ +DL +G G + AI Sbjct: 481 FDRYMVQIQQKQGVSQGVLFPEILQLPASEAAVLQSIMDDLSAVGFDLSNLGGGSYAING 540 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS----------- 548 IP+ + N +L+R+++ ++ + D E I SI + Sbjct: 541 IPSGIEGLNPVELVRNMLHTAMEKGS-----DVKEEIQ-------SILALTLARAAAIVY 588 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 G+ + + EM L+ + P+ + G+ +K DIE+LF Sbjct: 589 GQVLSNEEMVSLVDNLFACPSPNYTPDGKTVLTTIKEEDIERLFK 633 >gi|332704043|ref|ZP_08424131.1| DNA mismatch repair protein mutL [Desulfovibrio africanus str. Walvis Bay] gi|332554192|gb|EGJ51236.1| DNA mismatch repair protein mutL [Desulfovibrio africanus str. Walvis Bay] Length = 645 Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 186/650 (28%), Positives = 299/650 (46%), Gaps = 68/650 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L ++ NQIAAGE++ERP+ +KEL+EN LDA +SRV+ I GG+ + D+G+ Sbjct: 6 SIRILPSELANQIAAGEVVERPASVVKELVENCLDAGASRVDVAIERGGQGLVLVQDDGW 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM SEE+ +AV RH TSKI +D I +FGFRGEALPSI +VS L + S Sbjct: 66 GMPSEELELAVTRHATSKIGRVEDLFAIRSFGFRGEALPSIASVSRLRMASLAADQQEAW 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I++ +I++ P A+ GT +EVRDLFF +PARL FLK++ E +++ R+A+A+ Sbjct: 126 SISVEAGRITTQGPDALACGTRIEVRDLFFNVPARLKFLKTQATEAKRCQEIVARLALAH 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V+F F+T + R++++ + + I G G Sbjct: 186 TAVAFGFTTDGR---TLLRFPPGQELARRLAEIWPPPICEGLAPFDFSLHGIRAHGLAGK 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + ++ ++NGR VQD+ ++S +R AY+ + YP V+L LE+ P +VDVNV Sbjct: 243 PEAAQARGDRLLFYVNGRPVQDRLLVSCVRQAYSGRLLSREYPQVLLFLELPPEEVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK--KGISTSSVLSKKMISSFHQDNAPKTHLPK 357 HPAK +RF++ +I I +++ +A+ G+ S ++ F + + P Sbjct: 303 HPAKLEVRFKDEAVIFTVIRRALLQALETEGHGVHPSGNNLRESAMPFGRKASADPQQPA 362 Query: 358 YATSLTNTQEKLFLQEN------------------------------------RLSTNDL 381 S + Q Q + S+ D Sbjct: 363 KFPSYSEFQASESRQSSLDIRHLASAQPSPRTESTTPGPYLSGESKTEAYADTSASSMDS 422 Query: 382 LPSDDPTYSEDNDPVEE----------------SEATHYQLGIACAQIHQNYIISQTTDG 425 + S E + + Q+ Y++ DG Sbjct: 423 VDSRTDARPWTESARPAHASRPTGPTCVAGQVLPEHAEHGAPVYLGQVADTYLVLCLPDG 482 Query: 426 -LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 L ++DQHAAHER+++ + S + + L P + L E + + E +L LG Sbjct: 483 SLGLLDQHAAHERVLYAR--HASQSGRSEKRALAVPLELPLHASEQSKLDELWSELLDLG 540 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 R P+ + I IPA+L LLR+ + + R+ ++ A ++C Sbjct: 541 FNLRRPRPDLLTIVSIPAMLEPAAARDLLRESLT------GQSSPDGRLHDLWALLSCKA 594 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++++ + + E LL E P C HGRP I+L ++EKLF R Sbjct: 595 ALKANQPLAQAEAMALLTEWAATPEREYCPHGRPILIRLSAKELEKLFKR 644 >gi|299144076|ref|ZP_07037156.1| DNA mismatch repair protein MutL [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518561|gb|EFI42300.1| DNA mismatch repair protein MutL [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 619 Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 180/632 (28%), Positives = 300/632 (47%), Gaps = 52/632 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L E I +IAAGEIIE P+ +KEL+ENS+DA++ + + G S+ +ITD+G Sbjct: 1 MSIILLDEATIAKIAAGEIIENPASIVKELLENSIDAKAKNIIVEVRGNIGSYIRITDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM +++ +A RH TSK+ ++D NI + GFRGEAL SI +S + ++++ + +G Sbjct: 61 IGMDKDDLNLAFLRHSTSKLKTAEDLHNIVSLGFRGEALASISHISKIEVLTKTKDDLSG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + I KI + + + GT V+D+F+ +P R +LK + E N I +V++++A+ Sbjct: 121 TRAEIEDGKIVKMNSIGLPVGTTFYVKDVFYNMPVRKKYLKLDNTEFNYIYEVVQKIALG 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P +S S N I ++G + +N +E N SN ++ + Sbjct: 181 NPDISIKLIRDNKVILN---SSATDNLKNHIFSILGREVASNLIEGNFSSNSYKIKSFIS 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 R N Y++INGR V++ I I Y IPL RYPV +L ++IDP VDVN Sbjct: 238 DNKLYRSNRYHQYIYINGRYVKNLDISKEIEKHYYSLIPLNRYPVFLLYIDIDPILVDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH-----------Q 347 VHP K ++ I + + + + + + + + + Q Sbjct: 298 VHPKKHEVKLSKENNILAILSDLVDETLYPNRSIINPIKEEPKERNINIFEMFKEVDSEQ 357 Query: 348 DNAPKTHLPKYATSLTNTQEK--LFLQENR----------LSTNDLLPSDDPTYSEDNDP 395 + KT Y S+ + K F +E + + D + + + + Sbjct: 358 NTQNKTENFIYNNSIEEFESKTNAFFEEQKHIYNNTNNTCENNEDFKNINSSLENSNTNN 417 Query: 396 VEESEATHYQLGIA--CAQIHQNYIISQTT--DGLVIVDQHAAHERLIFEKMRQDFNSTK 451 E+S L + + +II + ++DQHAAHER+++EK ++ F +++ Sbjct: 418 NEDSSKIDCDLLNTRLVGILFKTFIILENYSKGRCYLIDQHAAHERILYEKFKEQFENSE 477 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + SQ L+TPEII+L E + + E LG + E FG N+I IR++P I Sbjct: 478 VLSQILITPEIIELSVEEKEKLENNYELFKSLGFEIEEFGENSIVIRQVPMIFGHGVRYD 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR---------SGRKMQSIEMNRLLR 562 + D ID + + D + I +G ++ +E+ L++ Sbjct: 538 FIHDTIDSLDKIKQSSYEVDSYK-----------IMKKACKAAVKAGDELSDMEVQALIK 586 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + N C HGRPT I+LK +IEKLF R Sbjct: 587 SLLECKNPYTCPHGRPTIIELKSLEIEKLFLR 618 >gi|237719068|ref|ZP_04549549.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_2_4] gi|229451447|gb|EEO57238.1| DNA mismatch repair protein mutL [Bacteroides sp. 2_2_4] Length = 633 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 160/634 (25%), Positives = 291/634 (45%), Gaps = 48/634 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DA++ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIREAADLFALRTMGFRGEALASIAAVAQVELKTRPESEELGTK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G ++ S ++ + G+ +++LFF +PAR FLK+ E + I R+A+ +P Sbjct: 125 LVIAGSQVESQEAISCSKGSNFSIKNLFFNVPARRKFLKANSTELSNILAEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + S + + +RI + G+ + ++ + + + GY P Sbjct: 185 EVAFSLYSNDSELFNLPV----SQLRQRILAIFGKKLNQQLLNIDVNTTMVKISGYVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + IP G + ++DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMEAYEQLIPAGEQISYFIYFDVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + S+++++ K S I +F + + + Sbjct: 301 PTKTEIKFENEQAIWQILSASVKESLGKFSAIPSIDFDTEDMPDIPAFEEKISSEPPKVH 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDD-----PTYSEDNDPVEESEATH--------- 403 Y T + + + +D S+ N+P E E Sbjct: 361 YNTDYNPFKVSAGGGGGGSYSRSKVEWEDLYGGLTKASKMNNPQPEPEMDWEDSSIGGEP 420 Query: 404 ------------------------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 + G Q +I++ GL+++DQH AH R++ Sbjct: 421 AFVEEKIETVTSAASSTLYANEPVMEKGNQHLQFKGRFILTSVKSGLMLIDQHRAHIRVL 480 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 F++ + SQ +L PEI+ L E A++ +DL +G G + AI Sbjct: 481 FDRYMVQIQQKQGVSQGVLFPEILQLPASEAAVLQSIMDDLSAVGFDLSNLGGGSYAING 540 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 IP+ + N +L+R+++ ++ ++ + T+A +I G+ + + EM Sbjct: 541 IPSGIEGLNPVELVRNMLHTAMEKGN-DVKEEIQNILALTLARAAAIVYGQVLSNEEMVS 599 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 L+ + P+ + G+ +K DIE+LF Sbjct: 600 LVDNLFACPSPNYTPDGKTVLTTIKEEDIERLFK 633 >gi|189463695|ref|ZP_03012480.1| hypothetical protein BACINT_00026 [Bacteroides intestinalis DSM 17393] gi|189438645|gb|EDV07630.1| hypothetical protein BACINT_00026 [Bacteroides intestinalis DSM 17393] Length = 642 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 164/648 (25%), Positives = 281/648 (43%), Gaps = 66/648 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DAE+ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQEIHVLVTDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + +A +RH TSKI + D + T GFRGEAL S+ AV+ + L +R G + Sbjct: 65 MSETDARLAFERHATSKIKEAADLFALRTMGFRGEALASVAAVAEVELKTRTANEELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I+G K+ S V+ G+ +++LFF IPAR FLK+ E + I R+A+ +P Sbjct: 125 IVIAGSKVESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTELSNILTEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F + + + + +RI V G+ + ++ + + + G+ P Sbjct: 185 EVAFYLYSNDTELFNLPVMP----LRQRILAVFGKKLNQYLLSVDVDTTMVKVSGFVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + IP G + E+DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMDAYEQLIPAGEQISYFIYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K+ I+F N I + S+++++ K S + + + + P Sbjct: 301 PTKTEIKFENEQAIWQILSASVKESLGKFNAVPSIDFDTEGMPDIPAFDQTRPIEPPKVH 360 Query: 357 ------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL---- 406 + TS ++ ++ L + + EE Sbjct: 361 YNSDFNPFKTSSASSYSGGNYSRPKVDWEGLYDGLEKASKMNAPMEEEPFVDETDWASAP 420 Query: 407 -----------------------------------GIACAQIHQNYIISQTTDGLVIVDQ 431 G Q +I++ GL+++DQ Sbjct: 421 VSTDMSEERTPYIPETQASSSLSAPLYANEPTVEKGAQHFQFKGRFILTSVKSGLMLIDQ 480 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 H AH R++FE+ + + SQ +L PEI+ L E A++ ED +G + G Sbjct: 481 HRAHIRVLFERYMNQISQKQGVSQGVLFPEIVQLPASEAAVLESIMEDFSAVGFELTPLG 540 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT-----YTLQDRIENILATMACYGSI 546 + AI IP+ + N +L+R+++ ++ T+ A I Sbjct: 541 GGSYAINGIPSGIEGLNPVELVRNMVHTAMEKGNDVKEEVQTILALTLAKAAA------I 594 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 G+ + + EM L+ + P + GR +K DIEKLF R Sbjct: 595 VYGQVLSNEEMANLVDSLFACPTPNYTPDGRTVLSTIKEEDIEKLFSR 642 >gi|298480178|ref|ZP_06998376.1| DNA mismatch repair protein MutL [Bacteroides sp. D22] gi|298273459|gb|EFI15022.1| DNA mismatch repair protein MutL [Bacteroides sp. D22] Length = 633 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 165/645 (25%), Positives = 289/645 (44%), Gaps = 70/645 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DA++ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIRQAADLFALRTMGFRGEALASIAAVAQVELKTRPESEELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G ++ S V+ + G+ V++LFF +PAR FLK+ E + I R+A+ +P Sbjct: 125 LVIAGSQVESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTELSNILAEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + S + + +RI + G+ + + + + + GY P Sbjct: 185 EVAFSLYSNDSELFNLPV----SQLRQRILAIFGKKLNQQLLNIEVNTTMVKISGYVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + IP G + ++DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMEAYEQLIPTGEQISYFIYFDVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + S+++++ K S I +F + + + Sbjct: 301 PTKTEIKFENEQAIWQILSASVKESLGKFSAIPSIDFDTEDMPDIPAFEEKISSEPPKIH 360 Query: 358 YATSLTN------------------TQEKLF------LQENRLSTNDLLPSDDPTYSEDN 393 Y T E L+ + N + +D + Sbjct: 361 YNTDYNPFKVSAGGGGGGSYSRSKVEWEDLYGGLTKASKMNNPQPEPEMDWEDSSIGGQP 420 Query: 394 DPVEE--------------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 VEE + + G Q +I++ GL+++DQH AH R++ Sbjct: 421 AFVEEKMETVTSAASSTLYASEPVIEKGNQHLQFKGRFILTSVKSGLMLIDQHRAHIRVL 480 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 F++ + SQ +L PEI+ L E A++ +DL +G G + AI Sbjct: 481 FDRYMVQIQQKQGVSQGVLFPEILQLPASEAAVLQSIMDDLSAVGFDLSNLGGGSYAING 540 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS----------- 548 IP+ + N +L+R+++ ++ + D E I SI + Sbjct: 541 IPSGIEGLNPVELVRNMLHTAMEKGS-----DVKEEIQ-------SILALTLARAAAIVY 588 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 G+ + + EM L+ + P+ + G+ +K DIE+LF Sbjct: 589 GQVLSNEEMVSLVDNLFACPSPNYTPDGKTVLTTIKEEDIERLFK 633 >gi|310778298|ref|YP_003966631.1| DNA mismatch repair protein MutL [Ilyobacter polytropus DSM 2926] gi|309747621|gb|ADO82283.1| DNA mismatch repair protein MutL [Ilyobacter polytropus DSM 2926] Length = 633 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 174/646 (26%), Positives = 304/646 (47%), Gaps = 71/646 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L E + N IAAGE++E P+ IKE++ENSLDA+S+ + + G+ I+DNG G Sbjct: 4 IKILDESVSNIIAAGEVVENPASMIKEILENSLDAKSTNIRIQVKNSGRD-VTISDNGVG 62 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ +++ + ++RH TSKI +D N++T+GFRGEAL SI +VS + + S+ + G + Sbjct: 63 MSKDDLLLCIERHATSKIFNKEDIFNLYTYGFRGEALASIASVSKMRITSKRESDELGTE 122 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I K++ V PV++N GT +E+++LF+ PARL FL+ + E I + + + ++A P Sbjct: 123 IKALAGKVTKVSPVSVNEGTEIEIKELFYNTPARLKFLRKKSTEYGKIKETVLKESLANP 182 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F+ K ++ I ++ G + + N E G+ G Sbjct: 183 NVGFSLEIDGRELLK----TSGKGIQNTILELFGRNVLKNLKEFPL--------GFLGNL 230 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + + ++NGR V+ + + I Y + GRYP ++ LEIDP+++DVNVH Sbjct: 231 EITRSSKDYMHTYVNGRYVKSQILEKAIIDGYYTKLTKGRYPFAIIFLEIDPKEIDVNVH 290 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV---------------------LSK 339 P+K ++F + + N + I+KAI + S + Sbjct: 291 PSKKIVKFSESSFVYNQVFSEIEKAIGEDEDIVSLEMSFQNREKNVENFLDLDEFKGIID 350 Query: 340 KMISSFH-------------QDNAPKTHLPKYATSLTNTQE------------------K 368 K IS+ ++ + +P + + TQE K Sbjct: 351 KEISTPKKTPDKEHSEKEKTEEKNNEKTVPSFKEEVIKTQEVSLLDGEGVFQKKYSAEDK 410 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 + + SE + E Q +YII + L I Sbjct: 411 NIKNRPEVLQEEKKIYQSIDVSEKKPEIPEKTIEEKNYFRVIGQFMNSYIIVERNKTLEI 470 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 DQH ER+++E +++ S ++ +Q LL P + L E ++ E+ E + G + E Sbjct: 471 YDQHIVQERVLYETLKKRHFSREVATQNLLVPLKLRLSYEEKNIVFENLEIFNEFGFEIE 530 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 FG + + +R +P + +I R +++E+ + ++D E I+ +M+C SI++ Sbjct: 531 DFGDDEVLLRGVPVFDFRTSIENTFRFMLEELKNE---TGVKDFREKIIISMSCRNSIKA 587 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 G K+ EM L++ + C HGRP +K+ L ++EK F R Sbjct: 588 GEKLSFDEMELLIKRLHDVGK-YTCPHGRPIILKVTLEELEKNFKR 632 >gi|295088070|emb|CBK69593.1| DNA mismatch repair protein MutL [Bacteroides xylanisolvens XB1A] Length = 633 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 165/645 (25%), Positives = 290/645 (44%), Gaps = 70/645 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DA++ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIRQAADLFALRTMGFRGEALASIAAVAQVELKTRPESEELGTK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G ++ S V+ + G+ V++LFF +PAR FLK+ E + I R+A+ +P Sbjct: 125 LVIAGSQVESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTELSNILAEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + S + + +RI + G+ + + + + + GY P Sbjct: 185 EVAFSLYSNDSELFNLPV----SQLRQRILAIFGKKLNQQLLNIEVNTTMVKISGYVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + IP G + ++DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMEAYEQLIPTGEQISYFIYFDVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + S+++++ K S I +F + + + Sbjct: 301 PTKTEIKFENEQAIWQILSASVKESLGKFSAIPSIDFDTEDMPDIPAFEEKMSSEPPKIH 360 Query: 358 YATSLTN------------------TQEKLF------LQENRLSTNDLLPSDDPTYSEDN 393 Y T E L+ + N + +D + + Sbjct: 361 YNTDYNPFKVSAGGGGGGSYSRSKVEWEDLYGGLTKASKMNNPQPEPEMDWEDSSIGGEP 420 Query: 394 DPVEE--------------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 VEE + + G Q +I++ GL+++DQH AH R++ Sbjct: 421 AFVEEKMETVTSAASSTLYASEPVIEKGNQHLQFKGRFILTSVKSGLMLIDQHRAHIRVL 480 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 F++ + SQ +L PEI+ L E A++ +DL +G G + AI Sbjct: 481 FDRYMVQIQQKQGVSQGVLFPEILQLPASEAAVLQSIMDDLSAVGFDLSNLGGGSYAING 540 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS----------- 548 IP+ + N +L+R+++ ++ + D E I SI + Sbjct: 541 IPSGIEGLNPVELVRNMLHTAMEKGS-----DVKEEIQ-------SILALTLARAAAIVY 588 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 G+ + + EM L+ + P+ + G+ +K DIE+LF Sbjct: 589 GQVLSNEEMVSLVDNLFACPSPNYTPDGKTVLTTIKEEDIERLFK 633 >gi|167765429|ref|ZP_02437542.1| hypothetical protein BACSTE_03819 [Bacteroides stercoris ATCC 43183] gi|167697057|gb|EDS13636.1| hypothetical protein BACSTE_03819 [Bacteroides stercoris ATCC 43183] Length = 630 Score = 447 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 165/629 (26%), Positives = 290/629 (46%), Gaps = 44/629 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DAE++ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEATEIHVLVTDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL S+ AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIREASDLFALRTMGFRGEALASVAAVAEVELKTRPAGEELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G K+ S V+ G+ V++LFF IPAR FLK+ E + I R+A+ +P Sbjct: 125 LVIAGSKVESQEAVSCPKGSNFSVKNLFFNIPARRKFLKANSTELSNILAEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+F + + + + +RI + G+ + ++ + I + G+ P Sbjct: 185 DVAFYLYSNDAELFNLPVMP----LRQRILAIFGKKLNQQLLSVDVDTTMIKVSGFVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +R Y F+NGR ++ + + AY + IP G + E+DP +DVN+H Sbjct: 241 EASRKKGAHQYFFVNGRYMRHPYFHKAVMDAYEQLIPAGEQISYFIYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS---KKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + ++++++ K S I +F Q + Sbjct: 301 PTKTEIKFENEQAIWQILSAAVKESLGKFNAVPSIDFDTEGMPDIPAFEQSRPIEPPKVH 360 Query: 358 YATSLTNTQ-------EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE---------- 400 Y + + + L S S N+PVEE Sbjct: 361 YNADFNPFKTSSASSYSSGGSYPRQSVEWEGLYSGLEKASRMNEPVEEEPLAFEEAVSAV 420 Query: 401 -----------------ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 ++ + G Q +I++ GL+++DQH AH R++F++ Sbjct: 421 TEAVEPASQSSSLYSGDSSSMEKGAQHLQFKGRFILTSVKSGLMLIDQHRAHVRVLFDRY 480 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + SQ +L PE+I L E A++ +DL +G G + AI IP+ Sbjct: 481 MTQIRQRQGVSQGVLFPELIQLPVSEAAVLESLSDDLAAVGFDFSPLGGGSYAINGIPSG 540 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 + N +L+R+++ ++ + ++ + T+A +I G+ + + EM+ L+ Sbjct: 541 IEGLNPVELVRNMVHTAMEKG-SDVKEEVRTILALTLARAAAIVYGQVLSNDEMSNLVDS 599 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 + + GR ++ DIEKLF Sbjct: 600 LFACSTPNYTPDGRTVLSTIREEDIEKLF 628 >gi|29349259|ref|NP_812762.1| DNA mismatch repair protein mutL [Bacteroides thetaiotaomicron VPI-5482] gi|253570395|ref|ZP_04847804.1| DNA mismatch repair protein mutL [Bacteroides sp. 1_1_6] gi|298384799|ref|ZP_06994358.1| DNA mismatch repair protein MutL [Bacteroides sp. 1_1_14] gi|81842112|sp|Q8A120|MUTL_BACTN RecName: Full=DNA mismatch repair protein mutL gi|29341167|gb|AAO78956.1| DNA mismatch repair protein mutL [Bacteroides thetaiotaomicron VPI-5482] gi|251840776|gb|EES68858.1| DNA mismatch repair protein mutL [Bacteroides sp. 1_1_6] gi|298261943|gb|EFI04808.1| DNA mismatch repair protein MutL [Bacteroides sp. 1_1_14] Length = 640 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 166/641 (25%), Positives = 290/641 (45%), Gaps = 55/641 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DA++ + ++ GK+ QI D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQIIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +R G + Sbjct: 65 MSETDARLSFERHATSKIREAADLFALRTMGFRGEALASIAAVAQVELKTRLESEELGTK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G K+ S V+ + G+ V++LFF +PAR FLK+ E + I R+A+ +P Sbjct: 125 LVIAGSKVESQEAVSCSKGSNFSVKNLFFNVPARRKFLKANSTELSNILAEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + S + + +RI + G+ + + + + + GY P Sbjct: 185 EVAFSLYSNDSELFNLPVSP----LRQRILAIFGKKLNQQLLNIEVNTTMVKISGYIAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + IP+G + E+DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMEAYEQLIPVGEQVSYFIYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + S+++++ K S I +F Q+ P Sbjct: 301 PTKTEIKFENEQAIWQILSASVKESLGKFSAIPSIDFDTEDMPDIPAFEQNLPPAPPKIH 360 Query: 358 YATSLTN------------------TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 Y + E L+ + S + + E++ EE Sbjct: 361 YNSDFNPFKVSSGGSGGGSYSRPKVEWEGLYGGLTKASKMNEPQQEPEMDWENSPFEEEP 420 Query: 400 EATH---------------------------YQLGIACAQIHQNYIISQTTDGLVIVDQH 432 + G Q +I++ GL+++DQH Sbjct: 421 MVAEEKTISAVSAASSTFSSASSTLYANESVIEKGNLHLQFKGRFILTSVKSGLMLIDQH 480 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AH R++F++ + SQ +L PEI+ L E A++ +DL +G G Sbjct: 481 RAHIRVLFDRYMVQIKQKQGVSQGVLFPEILQLPASEAAVLQGIMDDLSAVGFDLSDLGG 540 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 + AI IP+ + N +L+R+++ ++ ++ + T+A +I G+ + Sbjct: 541 GSYAINGIPSGIEGLNPVELVRNMLHTAMEKGN-DVKEEIQNILALTLARAAAIVYGQVL 599 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + EM L+ + P+ + G+ +K DIEKLF Sbjct: 600 SNEEMVSLVDSLFACPSPNYTPDGKTVLTTIKEEDIEKLFK 640 >gi|226226936|ref|YP_002761042.1| DNA mismatch repair protein MutL [Gemmatimonas aurantiaca T-27] gi|259509934|sp|C1A8L2|MUTL_GEMAT RecName: Full=DNA mismatch repair protein mutL gi|226090127|dbj|BAH38572.1| DNA mismatch repair protein MutL [Gemmatimonas aurantiaca T-27] Length = 607 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 164/609 (26%), Positives = 292/609 (47%), Gaps = 21/609 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + +QIAAGE++ERP+ +KEL+EN+LDA ++ V+ I GG++ +I DNG Sbjct: 3 RIAILPSAVADQIAAGEVVERPASVVKELVENALDAGATSVDITIEDGGRTLIRIADNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + +A+ RH TSKI ++ + +FGFRGEALP+I +VS L + + ++ +G Sbjct: 63 GMDGADAVLALSRHATSKITSAEQLVGVRSFGFRGEALPAIASVSELQIET-ASEDGSGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + ++ VA GT V V LF PARL F++S + E I D ++ + + Sbjct: 122 LVRVQAGTLTETGQVARRQGTTVSVHRLFHNTPARLKFMRSARSEWRAIVDAMQAIGVLR 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V FT ST R++ + G + V++++ + + G Sbjct: 182 RDVHFTVRHDGRVALDWPAVST---LRARLAALWGAADVERFVDVDDVQGVVHVSGLAER 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + + +NGR V+D ++ AY TIP G P +VL + + VDVNV Sbjct: 239 PADVGTATRRVLLIVNGRVVRDHGLIRAAEAAYRSTIPAGMRPSLVLQVHVPGGDVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSVLSKKMISSFHQD 348 HPAK+ +RFR+ + + +++++A+ + +S + + Sbjct: 299 HPAKAEVRFRDRWPLERAVEEAVRRALGLFDASAGIGWRTWSAAPASREPGHALGGIPLE 358 Query: 349 NAPKTHLPKYAT-SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 + P T L ++ ++T +DD T + D + A + Sbjct: 359 PSALRAAPAPEGLFATPAAADANLAQHAIATATAPTADDLTSAMQVDAMRAEAAREMETL 418 Query: 408 I--ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 + Q+ + Y++ + +G+V++DQH+AHER+++E+ + SQ LL P + L Sbjct: 419 VVPPLMQLRKTYLMFEHDEGVVLIDQHSAHERVLYEQFLGVLERGEAPSQRLLFPLTLHL 478 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 E H + RLG + + FG ++ ++ +P + + + LRD + +I Sbjct: 479 GPQEADAFEAHRDAFVRLGFEIDHFGGTSLLVQAVPMPHPRFDAERCLRDTLAALI-GDR 537 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 + + E + AT AC +I++G +M EM L R + + HGR T ++L Sbjct: 538 GASAAAKHERLAATFACKAAIKAGDQMSPGEMQALYRALAATVLPAHDVHGRSTIVRLSW 597 Query: 586 SDIEKLFGR 594 ++++ FGR Sbjct: 598 DELDRRFGR 606 >gi|86142881|ref|ZP_01061303.1| putative DNA mismatch repair protein [Leeuwenhoekiella blandensis MED217] gi|85830326|gb|EAQ48785.1| putative DNA mismatch repair protein [Leeuwenhoekiella blandensis MED217] Length = 628 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 156/631 (24%), Positives = 299/631 (47%), Gaps = 50/631 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KEL+EN++DA +S ++ ++ G++ Q+ D+G G Sbjct: 5 IKLLPDHVANQIAAGEVVQRPASVVKELLENAIDAGASSIKLLVKDAGRTLIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI +DD + T GFRGEAL SI AV+H+ L ++P G Q Sbjct: 65 MSPTDARLSFERHATSKINAADDLFALSTKGFRGEALASIAAVAHVDLKTKPEDEEVGTQ 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G I + A GT + V++LFF IPAR NFLKS+ VE + D +R+A+A+ Sbjct: 125 IEIEGSTIKNQEVCAAVKGTSIAVKNLFFNIPARRNFLKSDSVELRHVIDEFQRVALAHE 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++FT S + + N +RI V G V ++E++ + + G+ P Sbjct: 185 TIAFTLYHNDSELFNLPKT----NKRQRIVGVFGPKTNEKLVPVSEETEIVNIDGFIIKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F++ + + F+N R ++ ++ ++ A+ +P + L++DP+ +D+N+H Sbjct: 241 EFSKKTKGEQFFFVNDRFIKHPYLNHSVSAAFDGLLPDRARASYFIYLKVDPKTIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK--------------------- 339 P K+ ++F + I + +++ ++ + I+ ++ Sbjct: 301 PTKTEVKFEDEHAIYTLLRAAVKHSLGQFNIAPVLDFNRESNMDTPYAYKNKEAKPPKVE 360 Query: 340 --KMISSFHQDNAPKTH----LPKYATSLTNTQEKLFLQENRLSTN--------DLLPSD 385 + + F ++ T P Y E L+ +R + + P Sbjct: 361 VDRHFNPFEEEQKVTTSGFKSAPSYEKKSAAGWENLYAGLDRKTDTSGFSHVEIEQEPET 420 Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 + + E QIH YI+S G++++DQ+ AH+R+++E+ + Sbjct: 421 ESLFIEHESKGFSESKETENDSANTYQIHSKYIVSAIKSGMMLIDQNRAHQRILYEEFLR 480 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 + + SQ LL P +D E ++ E + L G + + IPA + Sbjct: 481 NITVKESVSQQLLFPLRLDFSASEIEILKELKDSLENTGFALSMPEAGVLEVSGIPASIQ 540 Query: 506 KKNI----PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 + + QLL D+ E+ ++ + T + + +MA ++++G K+ L+ Sbjct: 541 ESEVSIVLEQLLSDVEQEVPNAGFSQT-----DVLAKSMAKSMAVKTGEKLDERSREHLV 595 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 ++ + + TFI L + ++++ F Sbjct: 596 NKLFACTEPTLSPFLKKTFITLTVEELDRKF 626 >gi|294056556|ref|YP_003550214.1| DNA mismatch repair protein MutL [Coraliomargarita akajimensis DSM 45221] gi|293615889|gb|ADE56044.1| DNA mismatch repair protein MutL [Coraliomargarita akajimensis DSM 45221] Length = 618 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 184/616 (29%), Positives = 303/616 (49%), Gaps = 27/616 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++ NQIAAGE+IERP +KEL+ENS+DA ++R+E GGKS+ +I DNG Sbjct: 3 SIRILPDRVANQIAAGEVIERPVAVVKELVENSIDAGATRIEVEFRNGGKSYIRIEDNGK 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +E +A++RH TSK+ + D + I +FGFRGEALPSI +VS TL +R G Sbjct: 63 GMPPDEALLALERHATSKLREAADLNEIGSFGFRGEALPSIASVSKFTLRTRAEGWEHGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I ++G K+ R M GT++EV LF ++PAR FLK++ ET IT R A+A+ Sbjct: 123 EITLNGGKLIDKRECGMPVGTVIEVAHLFNSVPARRKFLKTDTTETAHITYTTRLFAVAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--SNEITLQGYT 237 P ++F +K + +RI+++ G+ N+ + ++ + + L G T Sbjct: 183 PGIAFRLIENGRTLFK---SPACNDLRDRIAEIWGKQLANDLIPVDIQDSQHGYRLTGLT 239 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R + +N R V + + + AY + GRYP L LEI ++VDV Sbjct: 240 AKPGIGRATRRELVTLVNRRPVDSRTLGFAVLDAYHGRVQKGRYPPAFLFLEIQAQEVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK----- 352 NVHPAK +RFR+ + IR FI+ +I + + + S L+ + + +PK Sbjct: 300 NVHPAKREVRFRDESAIRRFILSAITQTLQEYSESQGQTLATTAQAPEPIETSPKLSDLP 359 Query: 353 -------------THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 T + + T + L T+ ++ P PVE Sbjct: 360 AVQAKSEQAKPVSTATTRQSPKPALTIPTNEAPKPALETSSPAGANRPIKQPIATPVETP 419 Query: 400 EATHYQLGIA--CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + AQ+ + +T GLV++ A +R+ FE ++ + ST+ SQ L Sbjct: 420 SKPVRKQQRWKLIAQMQNQLALFETNRGLVMLHLRHADQRVRFEAIQNESVSTESLSQEL 479 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P ++L ++ ++ + L+ G E FG + + IP+ L+ ++ LRD+I Sbjct: 480 LIPIPLELEPLASEVLQKNLKQLNDCGFSIEAFGRHFYRVEAIPSWLAIEHTEPYLRDLI 539 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D + + LQ+ + LA +A S +G + I + +L ++ N G+ Sbjct: 540 DHLRQREGGHKLQNYLLETLAQLAIKDSYHAGDGINQIAIQQLADDLLVCANPHTSPSGK 599 Query: 578 PTFIKLKLSDIEKLFG 593 PT+ ++ ++ K G Sbjct: 600 PTYTEVSWNEWYKRLG 615 >gi|228471768|ref|ZP_04056541.1| DNA mismatch repair protein MutL [Capnocytophaga gingivalis ATCC 33624] gi|228276921|gb|EEK15616.1| DNA mismatch repair protein MutL [Capnocytophaga gingivalis ATCC 33624] Length = 607 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 151/608 (24%), Positives = 288/608 (47%), Gaps = 26/608 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + NQIAAGE+I+RP+ A+KEL+EN++DA++++++ ++ G++ Q+ DNG G Sbjct: 5 IRLLPDNVANQIAAGEVIQRPASAVKELLENAIDAKATQIKLILKDAGRTLVQVVDNGIG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + +A +RH TSKI DD ++ T GFRGEAL SI A++ + + + G Sbjct: 65 MSPTDARLAFERHATSKIRVADDLFSLQTKGFRGEALASIAAIAQVEMTTCQEGEEIGTA 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G KI+ P GT + +++LFF +PAR NFLKS+ VE I D R+ +A+P Sbjct: 125 ITIEGNKITDQYPTVTQKGTSIAMKNLFFNVPARRNFLKSDNVELRHILDEFHRVVLAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F+ ++ + S +RI QV G V + EK+ + + G+ Sbjct: 185 DIQFSLIHNGVEQFNLPPTS----LKKRIVQVFGNRLNEQLVPVEEKTEVVNIHGFISRN 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +F + N + + +N R ++++++ + +A+ + G P L LEIDP+ +D+N+H Sbjct: 241 SF-KRNKSLQFFMVNHRFIKNRYLHHAVLSAFEGLLREGEQPEYFLYLEIDPKHIDINIH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT------- 353 P K+ I+F N I + +I+ ++ + + + S K Sbjct: 300 PTKTEIKFDNDQTIYALLRSAIKHSLGQFHVLPTIDFSLDESQEVPYSYKDKEAQTPTYQ 359 Query: 354 ---HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-------EATH 403 + + +T F + S NDP E+ E Sbjct: 360 VDRNFNPFKMDNPSTLGGTFSSHRNTPSPQWESLYAGIPSRVNDPFEKEQVVPTLIEHPT 419 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 + YII+ D ++ + AH+R+++E+ + SQ+LL P Sbjct: 420 EVKVQTLLYFQKKYIITYLKDKVLFIHVSRAHQRILYERFHKSITQGVSISQSLLFPLEF 479 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 + E + L+R+G E G N I +P ++ + + +L ++++ ++ Sbjct: 480 EFSPTEIISLQGLIPLLNRVGFLLEIQG-NKICFTGLPPMVKESQVEDILHQLLEKEMED 538 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 L + E ++ ++ ++++G+ + + E +L+ ++ +S G+ + +L Sbjct: 539 IPQDELSQK-EALVKNLSKSLAVKAGQTLSAEEQEQLVYDLFSCKDSLISPFGKKIYTEL 597 Query: 584 KLSDIEKL 591 +++E Sbjct: 598 SSNELENR 605 >gi|224025966|ref|ZP_03644332.1| hypothetical protein BACCOPRO_02717 [Bacteroides coprophilus DSM 18228] gi|224019202|gb|EEF77200.1| hypothetical protein BACCOPRO_02717 [Bacteroides coprophilus DSM 18228] Length = 638 Score = 446 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 167/655 (25%), Positives = 271/655 (41%), Gaps = 85/655 (12%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + NQIAAGE+I+RP+ IKEL+EN++DA + ++ + GK+ Q+ D+G G Sbjct: 5 IRLLPDSVANQIAAGEVIQRPASVIKELVENAIDAGAKHIDVSVTDAGKTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + +A +RH TSKI + D +HT GFRGEAL SI AV+ + L + G Sbjct: 65 MSETDARLAFERHATSKIREASDLFALHTMGFRGEALASIAAVAQVELRTCQAGEQLGTS 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ISG K+ S VA G+ VR+LFF +PAR FLKS Q E + I R+A+ P Sbjct: 125 IIISGSKVESQEAVACPQGSNFIVRNLFFNVPARRKFLKSNQTELSNILAEFERIALVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+FT + + +RI V G+ + L+ + + + G+ G P Sbjct: 185 EVTFTLHHNDTEILNLPAI----QLRQRIMGVFGKKLNQELLSLDIDTTMVKIHGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + F+NGR ++ + + AY IP G + ++DP +DVN+H Sbjct: 241 ETARKKGARQFFFVNGRYMRHPYFHKAVADAYENLIPAGEQVSYFIYFDVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS---KKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + ++++ + + S I +F PK Sbjct: 301 PTKTEIKFENEQAIWQILSAAVKETLGRFNAVPSIDFDTEGMPDIPAFEASPYSLVQPPK 360 Query: 358 YATSLT-------------------------------NTQEKLFL-----QENRLSTNDL 381 + + + E LF +E L Sbjct: 361 TSYDPSYNPFDMSPLPPSSYSSASYTPSSAYAPKKPATSWEPLFHGLEKGREPEGQEGTL 420 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGI-------ACAQIHQNYIISQTTDGLVIVDQHAA 434 P + E Q +YI++ GL+I+DQ A Sbjct: 421 APEEGYVEDASASMPGEPTLYDALPKESVVEKVAQHYQYKGSYILTSVKSGLMIIDQQRA 480 Query: 435 HERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA 494 H R+++++ + SQ +L P+++ E ++ E EDL LG G Sbjct: 481 HIRILYDQYMAQIEKRQSISQRMLFPDMVHFSPAEVPVLEEIMEDLKALGFDLSSLGGGT 540 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY----------- 543 AI IP+ + N L+ +++ ++ C Sbjct: 541 YAINGIPSGIEGLNPETLVTNMVQTALEKG-----------------CKVKEEVQSLLAL 583 Query: 544 -----GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 +I G+ + + EMN L+ + + G+ LK D+EKLF Sbjct: 584 SLAKAAAIVPGQVLTNEEMNNLVDGLFAVATPNYTPDGKTVLSVLKEEDLEKLFK 638 >gi|256026720|ref|ZP_05440554.1| DNA mismatch repair protein mutL [Fusobacterium sp. D11] gi|289764716|ref|ZP_06524094.1| DNA mismatch repair protein mutL [Fusobacterium sp. D11] gi|289716271|gb|EFD80283.1| DNA mismatch repair protein mutL [Fusobacterium sp. D11] Length = 644 Score = 445 bits (1144), Expect = e-122, Method: Composition-based stats. Identities = 187/659 (28%), Positives = 315/659 (47%), Gaps = 84/659 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N IAAGE++E P+ IKELIENSLDA S ++ + GG I+D+G Sbjct: 3 RIRILDESVSNAIAAGEVVENPTSMIKELIENSLDAGSKEIKLEVWNGGLD-ISISDSGC 61 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++++RH TSKI +D NI T+GFRGEAL SI +VS + L SR G Sbjct: 62 GMSKEDLLLSIERHATSKILTKEDLFNIRTYGFRGEALSSIASVSKMILSSRTEDMQNGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G K+++++ N GT +E++DLF+ PAR FL+ E E I D+ R A+A Sbjct: 122 QMNVLGGKVTNLKDTQRNVGTQIEIKDLFYNTPARKKFLRKENTEYLNIKDIFLREALAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + K ++ I ++ G++++ N + + GY G Sbjct: 182 PNVKFILNIEGKESIK----TSGNGIENAILEIFGKNYLKNFSKFSL--------GYLGN 229 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N + ++FINGR+V+ K + + AY + G+YP ++ LE++P ++DVNV Sbjct: 230 ANLFKANRDSIFIFINGRSVKSKIVEEAVINAYHTKLMKGKYPTALIFLEVEPNEIDVNV 289 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK------------MISSFHQ 347 HP+K ++F N I + + I+ S + + I+ F Sbjct: 290 HPSKKVVKFANQNAIFDLVKGEIENFFTDDEDFISPYIGAENEVEDNTKNNFLDINDFKD 349 Query: 348 DNAPKTHLP---------------------KYATSLTNTQEKLFLQENRLSTNDLLPSDD 386 D + L + + T T+ + E + + ++ D+ Sbjct: 350 DMQDFSQLSVVKKEDYSKKDYKNIEVEKEKTFGNAGTTTESSINSNEIKEDSKNIENFDN 409 Query: 387 PTYSE----------DNDPVEESEATHYQL---------------------GIACAQIHQ 415 + +ND +E+SE Y Q+ Sbjct: 410 SVKNPISVDKNKVEINNDIIEKSENNKYIFNQEDVSRGKIFDDFSSLKNIDFKVIGQVFD 469 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 +I+ + L I DQH HER+++EK++Q++ + ++ Q LL P +L E L +E Sbjct: 470 TFILVERNGLLEIYDQHIIHERILYEKLKQEYYNHSMSKQNLLVPIRFELDPREKQLALE 529 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 + E G + F N I +R P + + + ++R+I+D I + +D EN Sbjct: 530 NIEIFSSFGFDIDDFDKNEILLRSTPTMNLRDSYENIIREILDNISKNKD----KDIREN 585 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 I+ +M+C G+I++ K+ EM ++ ++ + C HGRP +K+ L D+EKLF R Sbjct: 586 IIVSMSCKGAIKANHKLTLEEMYSMVAKLHEVGE-YTCPHGRPIIVKMSLLDLEKLFKR 643 >gi|313888302|ref|ZP_07821973.1| DNA mismatch repair protein, C-terminal domain protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845705|gb|EFR33095.1| DNA mismatch repair protein, C-terminal domain protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 624 Score = 445 bits (1144), Expect = e-122, Method: Composition-based stats. Identities = 177/627 (28%), Positives = 310/627 (49%), Gaps = 40/627 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L E+ I++IAAGEIIE + +KEL+ENS+DA + + + G + +++DNG G Sbjct: 2 IRLLDEQTISKIAAGEIIENSASIVKELVENSIDAGADDILVELRGESTDYIKVSDNGSG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ +A RH TSK+ +D I T GFRGEAL SI +S + LM++ + G Sbjct: 62 FSEEDLELAFLRHSTSKLQVIEDLEKIRTLGFRGEALASISNISKIKLMTKRENDLAGNS 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I KI V M GT + D+F+ P R FL+ + E + I D+++++A++ Sbjct: 122 LVIENGKIIKKNKVGMPKGTSFIINDVFYNTPVRKKFLRKDSTEISNIIDIVQKIALSNN 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + FT + + RI ++G + ++ E + +S ++G+ Sbjct: 182 NIKFTLIRDGKTILN---TGNDKDPINRIFSILGSEIASSLNEGSFESENYKIRGFFSDN 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N + Y+F+NGR ++D I + Y IPL RYPV +L ++IDP+ +DVN+H Sbjct: 239 KLFRSNRDSQYIFVNGRFIRDINISRAVEKNYNSLIPLNRYPVFILYIDIDPKLIDVNIH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ I+ N I+ + + +++ I +K + D + + Sbjct: 299 PKKNEIKISNENILTALLSEVVEEVIYPNRSIREIEFEEKKENINVFDIFDEDDSEEALD 358 Query: 361 SLTNT------------------QEKLFLQENRLSTNDLLPSDDP----TYSEDNDPVEE 398 S+ T +E +E L+ LL ++ +S D + +E+ Sbjct: 359 SIKITKSEKNNNLKSLWDLEKEIEESDTEKEQALNEEALLYREEYKKDSNFSNDKEHIEK 418 Query: 399 SEATHYQLGI---------ACAQIHQNYIISQTTDG--LVIVDQHAAHERLIFEKMRQDF 447 + + + + + YI+ + + +VDQHAAHER+ +EK + + Sbjct: 419 NFLFNRKASQIDEGLLNTRISGVLFKTYILLENQRDGKVFVVDQHAAHERVNYEKFLKMY 478 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 +++I+SQ L+ PEII+L + E I+ + + +LG K E FG ++ +RE+P I Sbjct: 479 LNSEISSQILIKPEIIELNQLEYDKILNYIDLFTKLGFKIEDFGDRSVVLREVPMIFGLP 538 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 +RDIID + D + + + I+ AC S+++G + IE+ L+++++ Sbjct: 539 TYVNFIRDIIDSL-DKEISSNYEADLYKIM-RKACKASVKAGDDLSDIEIEALIKDLKNC 596 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N C HGRPT +++ I KLF R Sbjct: 597 ENPYTCPHGRPTIVEVSKHTISKLFLR 623 >gi|257452675|ref|ZP_05617974.1| DNA mismatch repair protein mutL [Fusobacterium sp. 3_1_5R] gi|257466536|ref|ZP_05630847.1| DNA mismatch repair protein mutL [Fusobacterium gonidiaformans ATCC 25563] gi|315917691|ref|ZP_07913931.1| DNA mismatch repair protein mutL [Fusobacterium gonidiaformans ATCC 25563] gi|317059215|ref|ZP_07923700.1| DNA mismatch repair protein mutL [Fusobacterium sp. 3_1_5R] gi|313684891|gb|EFS21726.1| DNA mismatch repair protein mutL [Fusobacterium sp. 3_1_5R] gi|313691566|gb|EFS28401.1| DNA mismatch repair protein mutL [Fusobacterium gonidiaformans ATCC 25563] Length = 590 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 173/605 (28%), Positives = 303/605 (50%), Gaps = 30/605 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L E + N IAAGE++E P+ +KEL+ENSLDA S + I GG+ F +I D+G Sbjct: 3 KIHILEESVSNAIAAGEVVENPASLVKELLENSLDAGSKNIYLFIREGGR-FVEIRDDGM 61 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++V+RH TSKI +D + ++GFRGEAL SI +VS +++ S N G Sbjct: 62 GMSREDVLLSVERHATSKIKSKEDLFALQSYGFRGEALSSIASVSKMSITSCEVDANLGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G K++ ++ GT + ++DLFF PARL FL+ E I D++ + A+A Sbjct: 122 KMTVLGGKVTGIKDFPRTQGTDIIIQDLFFNTPARLKFLRKASTEYIQIKDIVLKEALAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V + S+ I ++ G++ + N + + GY G Sbjct: 182 PEVKIHLEIDGKE----SICSSGNGLENTILEIFGKNALKNLTKFSY--------GYLGN 229 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + + +VF+NGR V+ K I I +Y + G+YP + LEI ++DVNV Sbjct: 230 EKLYRSSRDSIFVFVNGRPVKAKLIEEAIIDSYYTKLMKGKYPFACVFLEIPASEIDVNV 289 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP+K I+F N + + + + +I++ ++ + + S K + ++ Sbjct: 290 HPSKKIIKFANASEVYSQVRNAIEEVFEEEKEFSFAQFSVKEVEEDREEKKILESFEIAE 349 Query: 360 TSLTNT------QEKLFLQENRLSTNDLLPSDDPTYSEDND----PVEESEATHYQLGIA 409 +EK + QE + L + D EE + Sbjct: 350 NREAKEVFKEIKEEKKYFQEEKTDKIPLFDLQNDKIPVIKDRRSFFEEEKISPKTYDFKI 409 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 AQI+ +++ + I DQH HER+++E++++ + I Q LL P + L E Sbjct: 410 LAQIYDTFLLVERNGIFEIYDQHIVHERVLYEELKEKYYGNAIQKQQLLVPLKLSLDPRE 469 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 L E+ E GI+ E FG N I IR +P++ K ++ +++R+I+ ++ Sbjct: 470 KELFFENQEQFSFFGIEGEDFGGNEIIIRSVPSVELKASMEEIIREILYQLQHEKE---- 525 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 +D E+++ +M+C G+I++ +K+ +M L++++ + C HGRP ++L ++E Sbjct: 526 RDIRESMIISMSCKGAIKANQKLVLEDMYPLVQKLHEIGE-YTCPHGRPIIMQLPFEELE 584 Query: 590 KLFGR 594 K F R Sbjct: 585 KWFKR 589 >gi|237745076|ref|ZP_04575557.1| DNA mismatch repair protein mutL [Fusobacterium sp. 7_1] gi|229432305|gb|EEO42517.1| DNA mismatch repair protein mutL [Fusobacterium sp. 7_1] Length = 647 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 186/658 (28%), Positives = 311/658 (47%), Gaps = 83/658 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N IAAGE++E P+ IKELIENSLDA S ++ + GG I+D+G Sbjct: 7 RIRILDESVSNAIAAGEVVENPTSMIKELIENSLDAGSKEIKLEVWNGGLD-ISISDSGC 65 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++++RH TSKI DD NI T+GFRGEAL SI +VS + L SR G Sbjct: 66 GMSKEDLLLSIERHATSKILTKDDLFNIRTYGFRGEALSSIASVSKMILSSRTEDMQNGT 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G K+++++ + N GT +E++DLF+ PAR FL+ E E I D+ R A+A Sbjct: 126 QMNVLGGKVTNLKDIQRNVGTQIEIKDLFYNTPARKKFLRKENTEYLNIKDIFLREALAN 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + K ++ I ++ G++++ N + + GY G Sbjct: 186 PNVKFILNIEGKESIK----TSGNGIENAILEIFGKNYLKNFFKFSL--------GYLGN 233 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N + +VFINGR+V+ K + + AY + G+YP ++ LE++P ++DVNV Sbjct: 234 ANLFKANRDSIFVFINGRSVKSKIVEEAVINAYHTKLMKGKYPTALIFLEVEPNEIDVNV 293 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS------------------------ 335 HP+K ++F N I + + I+ S Sbjct: 294 HPSKKVVKFANQNAIFDLVKGEIENFFIDDEDFISPYIEAENEVEDNTKNNFLDINDFKD 353 Query: 336 -VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN- 393 + +S +++ K T ++ +++N++ + DN Sbjct: 354 NIQDFSQLSVVKKEDYSKKDYRDIEVEKEKTFGNAGTTKSSINSNEIKEDSKNIENFDNS 413 Query: 394 ----------------DPVEESEATHY---------------------QLGIACAQIHQN 416 D +E+SE Y Q+ Sbjct: 414 VKNSISVDKNKVEINDDIIEKSENNKYIFNQEDVSRGKIFDDFSSLKNIHFKVIGQVFDT 473 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 +I+ + L I DQH HER+++EK++Q++ + ++ Q LL P +L E L +E+ Sbjct: 474 FILVERNGLLEIYDQHIIHERILYEKLKQEYYNHSMSKQNLLVPIRFELDPREKQLALEN 533 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E G + F N I +R P + + + ++R+I+D I + +D ENI Sbjct: 534 IEIFSSFGFDIDDFDKNEILLRSTPTMNLRDSYENIIREILDNISKNKD----KDIRENI 589 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +M+C G+I++ K+ EM ++ ++ + C HGRP +K+ L D+EKLF R Sbjct: 590 IVSMSCKGAIKANHKLTLEEMYSMVAKLHEVGE-YTCPHGRPIIVKMSLLDLEKLFKR 646 >gi|242278091|ref|YP_002990220.1| DNA mismatch repair protein MutL [Desulfovibrio salexigens DSM 2638] gi|242120985|gb|ACS78681.1| DNA mismatch repair protein MutL [Desulfovibrio salexigens DSM 2638] Length = 632 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 193/640 (30%), Positives = 299/640 (46%), Gaps = 62/640 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + NQIAAGE++ERPS +KEL+ENS+DA S++V+ + GG+ F + DNG G Sbjct: 6 IHVLPASLRNQIAAGEVVERPSSVVKELVENSIDAGSTQVDVAVERGGQGFISVKDNGRG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +EE+ +AV RH TSKIS +D + I +FGFRGEALPSI +VS + S + G Sbjct: 66 VAAEELKLAVTRHATSKISNVEDLTAITSFGFRGEALPSIASVSRFKMSSCRKGADEGWF 125 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G + P A+ GT VEVRDLFF +PARL FLK+E E V+ ++A+A Sbjct: 126 IHVEGGDVIDEGPAAIPGGTSVEVRDLFFNVPARLKFLKTESTEARRCNQVMFKIALANV 185 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 FTF++ ++++ + PER+S + + +E + ++ E+ + G GIP Sbjct: 186 DAGFTFTSNGREQFRLPA---GQSLPERLSVFWPRNICESLLEFSHEAGEMKVHGCAGIP 242 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +G ++ +F+NGR VQDK +LS IR AY + YP VL LE+ P VDVNVH Sbjct: 243 GLAQGRGDRIVMFVNGRPVQDKLLLSAIRGAYKGRLISREYPQAVLFLELPPELVDVNVH 302 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGI----------------------------- 331 PAK +RF+ + + + I I +A+++ + Sbjct: 303 PAKMEVRFQEESAVFSIIRNGIGQALSRYELGIMDEGVPMQSQPEMPVRPTVREKTLSES 362 Query: 332 STSSVLSKKMISSFHQ----------------DNAPKTHLPKYATSLTNTQEKLFLQENR 375 + + SS+++ PK+ + + + + ++ Sbjct: 363 VSLPIEPAAKFSSWNEFKNTDFTALEDEPEVGSALPKSDFISPPVTESRPEPNMVHEQTV 422 Query: 376 LSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG-LVIVDQHAA 434 P P E Q+ Y++ + +G L ++DQHAA Sbjct: 423 DYKAQETPLSVPEPLEYESFAAGPIYVPGSRIEYLGQVADTYLVLKLPNGSLGLLDQHAA 482 Query: 435 HERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA 494 HER+I+E M+ S+ L P I L E + E EDL G E Sbjct: 483 HERVIYENMKSLRTRG--ESRPLALPIDIVLHPSEVQRVQEMWEDLLAAGFMLELESGQT 540 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQS 554 +++R IP L + L+ +D TL +++ ++C +I++ + Sbjct: 541 LSMRGIPPALETGEAREYLKAAVD-----GQAKTL----DDLWIMLSCKSAIKANLPLAV 591 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 E LL K P C HGRP I ++EKLF R Sbjct: 592 NEALSLLEAWVKCPQREYCPHGRPVLISWSALEMEKLFKR 631 >gi|282882043|ref|ZP_06290684.1| DNA mismatch repair protein MutL [Peptoniphilus lacrimalis 315-B] gi|281298073|gb|EFA90528.1| DNA mismatch repair protein MutL [Peptoniphilus lacrimalis 315-B] Length = 629 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 176/633 (27%), Positives = 298/633 (47%), Gaps = 44/633 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + I++I+AGEIIE P+ +KEL+ENS+DA + + + F +ITD+G Sbjct: 1 MSIVLLDDNTISKISAGEIIENPASVVKELLENSIDAGAKNITVEVKNSPTDFIRITDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G ++EI +A RH TSK+S +D + T GFRGEAL SI +++ + L+++ ++ G Sbjct: 61 CGFKADEIELAFMRHSTSKLSKIEDLEELTTLGFRGEALASISSIAKIRLLTKNSEDLAG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I KI V M G+ V D+F+ P R FL+++ VE NLI DVI+++A+ Sbjct: 121 TSSKIENGKIIEQSNVGMPHGSTFYVEDIFYNTPVRKKFLRADNVEFNLIFDVIQKIALG 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P+VS ++ + N N+ I V+G + N +E + S ++ Y Sbjct: 181 NPQVSISYIRDGK---TLLNSYKNSNYKNHILNVLGREIATNLIENSFSSENYKIRAYFS 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 R + N Y++INGR V ++ I I Y IPL R+PV +L ++I+ +DVN Sbjct: 238 NNKLFRSSRNHQYIYINGRYVTNREISREIEKVYKSLIPLNRFPVFILFIDINSSLIDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAIN------------KKGISTSSVLSKKMISSFH 346 +HP K ++ N + + + +++ + K ++ + K + Sbjct: 298 IHPKKHEVKLSNENNLIAILCEMVEEVLYPNRSIREIEDEPKVNLNVFDIFDDKSNDNLI 357 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 P + + F + + + D+ ++ + E Sbjct: 358 NFREPTYEPGDNDIKEFDIDSQSFYENYQPFDMNKENLDNNNDIDNIEDKTEDFNYDNIP 417 Query: 407 G-----------------------IACAQIHQNYIISQTTDG--LVIVDQHAAHERLIFE 441 + +II + D + +VDQHAAHER+++E Sbjct: 418 SLEQFQEDSFLNDKEVIDSNLINTRIVGILFDTFIILENKDKDLIYLVDQHAAHERVMYE 477 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 K ++ + ++ I SQ LL PEII+L E I ++ + LG + FG N+I +RE+P Sbjct: 478 KYKKQYLNSNINSQVLLKPEIIELNASEYMKIEKNFKLFKDLGFSIDSFGENSIILREVP 537 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 I +RDIID + D + D + ++ AC ++++G + ++E+ L+ Sbjct: 538 MIFGFPTYVSFIRDIIDSLDDKIYSNYQAD-MWKVMK-RACLKAVKAGDTLSNMEVKELI 595 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + N C HGRPT I +K + I KLF R Sbjct: 596 NSLIHCENPYTCPHGRPTIIDIKKTTIAKLFLR 628 >gi|218128456|ref|ZP_03457260.1| hypothetical protein BACEGG_00024 [Bacteroides eggerthii DSM 20697] gi|317475718|ref|ZP_07934977.1| DNA mismatch repair protein MutL [Bacteroides eggerthii 1_2_48FAA] gi|217989347|gb|EEC55660.1| hypothetical protein BACEGG_00024 [Bacteroides eggerthii DSM 20697] gi|316908101|gb|EFV29796.1| DNA mismatch repair protein MutL [Bacteroides eggerthii 1_2_48FAA] Length = 629 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 166/628 (26%), Positives = 289/628 (46%), Gaps = 43/628 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DAE+ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAGEIHVLVTDAGKTGIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIREASDLFALRTMGFRGEALASIAAVAEVELKTRPAGEELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G K+ S V+ G+ V++LFF +PAR FLK+ E + I R+A+ +P Sbjct: 125 LLIAGSKVESQEAVSCPKGSNFSVKNLFFNVPARRKFLKANSTELSNILAEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+F + + + + +RI V G+ + ++ + I + G+ P Sbjct: 185 DVAFYLYSNDTELFNLPVMP----LRQRILAVFGKKLNQQLLSVDVDTTMIKVSGFVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +R Y F+NGR ++ + + AY + IP G + E+DP +DVN+H Sbjct: 241 ETSRKKGAHQYFFVNGRYMRHPYFHKAVMDAYEQLIPAGEQISYFIYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS---KKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + ++++++ K S I +F Q + Sbjct: 301 PTKTEIKFENEQAIWQILSAAVKESLGKFNAVPSIDFDTEGMPDIPTFEQSRPIEPPKVH 360 Query: 358 YATSLTNTQ------EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES------------ 399 Y + + + L S S+ N+P E Sbjct: 361 YNADFNPFKTSSASSYGGGSYSRQSVEWEGLYSGLEKASKMNEPAAEEPLDFETTVSDVT 420 Query: 400 ---------------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 E++ + G Q +I++ GL+++DQH AH R++F++ Sbjct: 421 EPASELSQSPSLYSGESSSMEKGAQHLQFKGRFILTSVKSGLMLIDQHRAHVRVLFDRYM 480 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 + SQ +L PEI+ L E A++ +DL +G G + AI IP+ + Sbjct: 481 NQIRQKQGVSQGVLFPEIVQLPASEAAVLESLSDDLAAVGFDLSPLGGGSYAINGIPSGI 540 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 N +L+R+++ ++ + ++ + T+A +I G+ + + EM+ L+ + Sbjct: 541 EGLNPVELVRNMVHTAMEKG-SDVKEEVRTILALTLARAAAIVYGQVLSNDEMSNLVDSL 599 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 + GR +K DIEKLF Sbjct: 600 FACATPNYTPDGRTVLSTIKEEDIEKLF 627 >gi|325281465|ref|YP_004254007.1| DNA mismatch repair protein mutL [Odoribacter splanchnicus DSM 20712] gi|324313274|gb|ADY33827.1| DNA mismatch repair protein mutL [Odoribacter splanchnicus DSM 20712] Length = 617 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 172/622 (27%), Positives = 301/622 (48%), Gaps = 34/622 (5%) Query: 1 MKI-RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I L + + NQIAAGE+++RP+ +KEL+EN++DA + ++ V+ GK+ Q+ D+ Sbjct: 1 MDIVHLLPDSVANQIAAGEVVQRPASVVKELMENAIDAGAKHIQVVLKNVGKAIIQVIDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM++ + MA +RH TSKI+ D +I+T GFRGEALPSI +VS + L +R ++ Sbjct: 61 GKGMSNMDARMAFERHATSKIASAQDLFSINTLGFRGEALPSIASVSEVELKTRQEEDEL 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G I I+ ++ + V+ GT + VR+LF+ IPAR FLKS+ E IT+ R+A+ Sbjct: 121 GTSIFIAASELKNQESVSCPKGTNISVRNLFYNIPARRKFLKSDTTELRNITNEFLRVAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P++SF S + Y ++ +RI + G+ + + ++ + + ++G+ Sbjct: 181 TNPEISFCLSNNGNVIYNLSP----SGLRQRIVNIFGKSINSRLINIDCATGLVDIKGFI 236 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R + Y F+N R ++ F + AY+ I + P + +DP +D+ Sbjct: 237 CSPEQARKTYGEQYFFVNNRFMKHPFFHKAVTEAYSGLIGVDCIPSYFIYFTVDPSLIDI 296 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK-MISSFHQDNAPKTHLP 356 N+HP K+ I+F+N T ++ I++A+ K I+ I + ++P Sbjct: 297 NIHPTKTEIKFQNETDFFQILLAGIKEALGKFNITPPLDFDTAGSIELIPTEKPAAPYVP 356 Query: 357 K-----------YATSLTNTQEKLFLQENRLSTN--------------DLLPSDDPTYSE 391 + Y++S N Q+ F +R +++ D L + + Sbjct: 357 RINYNPNYNPFNYSSSKLNPQDSDFEHPSRTASSFHQEKAPANWDILFDGLKEKEESIQT 416 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 + E+ Q+ YI++ GL+++DQ AHER++FEK N+ K Sbjct: 417 SIPEMTENINPVVPHTNCYFQLKGRYIVTPVQSGLMLIDQKRAHERILFEKYMTTLNTQK 476 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 +T Q L PEI++L G+ L+ E DL LG + FG N AI P LS + Sbjct: 477 VTGQKSLFPEILELSAGDFMLVGEILADLEYLGFELNVFGKNGYAIHATPPDLSYTRAKE 536 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 +L ++I+ ++ + + + +LA +A +I + EMN + + + + Sbjct: 537 VLIELIEHYKNTEGSIREKMKERVVLA-LAKASAISYNTALSCEEMNEMTGNLFACKHHN 595 Query: 572 QCNHGRPTFIKLKLSDIEKLFG 593 G+ L D+ F Sbjct: 596 FTADGKTIIHILNYEDVNSWFK 617 >gi|19703797|ref|NP_603359.1| DNA mismatch repair protein mutL [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713943|gb|AAL94658.1| DNA mismatch repair protein mutL [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 643 Score = 444 bits (1141), Expect = e-122, Method: Composition-based stats. Identities = 185/652 (28%), Positives = 310/652 (47%), Gaps = 77/652 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N IAAGE++E P+ IKELIENSLDA S ++ + GG+ I+D+G Sbjct: 9 RIRILDESVSNAIAAGEVVENPTSMIKELIENSLDAGSKEIKLEVWNGGRD-ISISDSGC 67 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++++RH TSKI +D NI T+GFRGEAL SI +VS + L SR G Sbjct: 68 GMSKEDLLLSIERHATSKIFTKEDLFNIRTYGFRGEALSSIASVSKMILSSRTEDMQNGT 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G K+++++ + N GT +E++DLF+ PAR FL+ E E I D+ R A+A Sbjct: 128 QMNVLGGKVTNLKDIQKNVGTQIEIKDLFYNTPARKKFLRKENTEYLNIKDIFLREALAN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + K ++ I ++ G++++ N + + GY G Sbjct: 188 PNVKFILNIEGKESIK----TSGNGIENAILEIFGKNYLKNFSKFSL--------GYLGN 235 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N + +VFINGR+V+ K + + AY + G+YP ++ LE++P ++DVNV Sbjct: 236 ANLFKANRDSIFVFINGRSVKSKIVEEAVIAAYHTKLMKGKYPTALIFLEVEPSEIDVNV 295 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK------------MISSFHQ 347 HP+K ++F N I + I I+ S + + I+ F Sbjct: 296 HPSKKVVKFANQNAIFDLIKGEIENFFTDDEDFISPYIEAENEVEENTKNNFLDINDFKD 355 Query: 348 DNA---------PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 D + + K ++ +E +++T + + N+ E+ Sbjct: 356 DMQDFLQLSVVGKEVYSKKDYNNIKVEKESFTDINKKINTFGSAGTTTESIINLNEIKED 415 Query: 399 SEATHYQ------------------------------------LGIACAQIHQNYIISQT 422 S+ Q+ +I+ + Sbjct: 416 SKNIENFDNSREINDKVKDKYIFNQEDTGRGKIFDDFTSLKNIDFKVIGQVFDTFILVER 475 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 L I DQH HER+++EK++Q++ + ++ Q LL P +L E L +E+ E Sbjct: 476 NGLLEIYDQHIIHERILYEKLKQEYYNHSMSKQNLLVPIRFELDPREKQLALENIEIFSS 535 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMAC 542 G + F N I +R IP + + + + R+I+D I + D ENI+ +M+C Sbjct: 536 FGFDIDDFDKNEILLRSIPTMNLRDSYENIFREILDNISKNKDV----DIRENIIVSMSC 591 Query: 543 YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 G+I++ K+ EM ++ ++ + C HGRP +K+ L D+EKLF R Sbjct: 592 KGAIKANHKLTIEEMYSMVAKLHEVGE-YTCPHGRPIIVKMSLLDLEKLFKR 642 >gi|300769727|ref|ZP_07079610.1| DNA mismatch repair protein MutL [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300492770|gb|EFK27955.1| DNA mismatch repair protein MutL [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 680 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 178/673 (26%), Positives = 291/673 (43%), Gaps = 86/673 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS + +QIAAGE++ERP+ +KEL+EN++DA +++V+ ++ G ++ D+G Sbjct: 5 KIHELSSVLADQIAAGEVVERPASVVKELVENAVDAHATQVDILVQESGVQSIRVIDDGD 64 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ A +RH TSKI +D +H+ GFRGEALPSI +V+ + + + TG Sbjct: 65 GIDDAEVLTAFKRHATSKITSREDLFRVHSLGFRGEALPSIASVADVVMNTST--GATGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I G K+ P + GT + V DLFF PARL +LKS Q E I DV+ R+A++Y Sbjct: 123 SIHYRGGKLLQQSPAPLRQGTDITVTDLFFNTPARLKYLKSPQTELANILDVVNRIALSY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F ++ + G+ + I+ + G V + + + L G+ + Sbjct: 183 PAVAFRLVHNAK---ELLKTAGRGDLQQVIAGIYGVQNARKMVAIQGSTTDFKLSGFVAL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + V INGR ++++ + + Y + +GRYP+ V+ L +DP VDVNV Sbjct: 240 PELTRASRQYITVLINGRAIKNQQLTKAVIKGYGSKLMVGRYPIAVIALTMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS--------------------- 338 HP K +R + + +I + + S++ + Sbjct: 300 HPTKQEVRLSKEPELAKLVSTTITDRLVDVNLIPSALTNLGSHRREHLNTDQLAMDLNAV 359 Query: 339 -----------KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 F A T P AT++ +T NR + + ++PS+ Sbjct: 360 SSQYQVADKTTPASTEQFAASLAAATMQPSSATTMVSTTSAQPSAVNRAAVSAVVPSESA 419 Query: 388 TYSEDNDP-------------------------------------------VEESEATHY 404 S + SEA Sbjct: 420 ASSANPPIMISHRDELTATPVQAFDQRYQSESGALPFGETAEPLETSTAASAPTSEAPDT 479 Query: 405 QLGIACAQIHQN---YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 + + Q Y++++ DG+ I+DQHAA ER+ +E RQ Q LL P Sbjct: 480 ERFPQLRYLGQMHGTYLLAEADDGMYILDQHAAQERINYEYYRQAIGEVSADQQNLLVPI 539 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 I+D + I E L LGI E FG N+ + P +R++ID ++ Sbjct: 540 ILDYPTSDVLKIKEKLPLLAELGIHLESFGGNSFIVHAHPTWFKAGQEEDTIREMIDWLL 599 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 T+ E M+C +I++ + + LL ++ N C HGRP + Sbjct: 600 QDDK-LTVAQFREKSAIMMSCKRAIKANHHLDDQQARALLAKLPTCENPFNCPHGRPVTV 658 Query: 582 KLKLSDIEKLFGR 594 SD+E++F R Sbjct: 659 HFTNSDMERMFKR 671 >gi|296328455|ref|ZP_06870976.1| DNA mismatch repair protein MutL [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154421|gb|EFG95218.1| DNA mismatch repair protein MutL [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 637 Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats. Identities = 186/652 (28%), Positives = 310/652 (47%), Gaps = 77/652 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N IAAGE++E P+ IKELIENSLDA S ++ + GG+ I+D+G Sbjct: 3 RIRILDESVSNAIAAGEVVENPTSMIKELIENSLDAGSKEIKLEVWNGGRD-ISISDSGC 61 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++++RH TSKI +D NI T+GFRGEAL SI +VS + L SR G Sbjct: 62 GMSKEDLLLSIERHATSKIFTKEDLFNIRTYGFRGEALSSIASVSKMILSSRTEDMQNGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G K+++++ + N GT +E++DLF+ PAR FL+ E E I D+ R A+A Sbjct: 122 QMNVLGGKVTNLKDIQKNIGTQIEIKDLFYNTPARKKFLRKENTEYLNIKDIFLREALAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + K ++ I ++ G++++ N + + GY G Sbjct: 182 PNVKFILNIEGKESIK----TSGNGIENAILEIFGKNYLKNFSKFSL--------GYLGN 229 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N + +VFINGR+V+ K + + AY + G+YP ++ LE++P ++DVNV Sbjct: 230 ANLFKANRDSIFVFINGRSVKSKIVEEAVIAAYHTKLMKGKYPTALIFLEVEPSEIDVNV 289 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK------------MISSFHQ 347 HP+K ++F N I + I I+ S + + I+ F Sbjct: 290 HPSKKVVKFANQNAIFDLIKGEIENFFTDDEDFISPYIEAENEVEENTKNNFLDINDFKD 349 Query: 348 DNAPKTHLP---------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 D + L K ++ +E +++T + + N+ E+ Sbjct: 350 DMQDFSQLSVVGKEVYSKKDYNNIKVEKESFTDINKKINTFGSAGTTTESIINLNEIKED 409 Query: 399 SEATHYQ------------------------------------LGIACAQIHQNYIISQT 422 S+ Q+ +I+ + Sbjct: 410 SKNIENFDNSREINDKVKDKYIFNQEDTGRGKIFDDFTSLKNIDFKVIGQVFDTFILVER 469 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 L I DQH HER+++EK++Q++ + ++ Q LL P +L E L +E+ E Sbjct: 470 NGLLEIYDQHIIHERILYEKLKQEYYNHSMSKQNLLVPIRFELDPREKQLALENIEIFSS 529 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMAC 542 G + F N I +R IP + + + + R+I+D I + D ENI+ +M+C Sbjct: 530 FGFDIDDFDKNEILLRSIPTMNLRDSYENIFREILDNISKNKDV----DIRENIIVSMSC 585 Query: 543 YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 G+I++ K+ EM ++ ++ + C HGRP +K+ L D+EKLF R Sbjct: 586 KGAIKANHKLTIEEMYSMVAKLHEVGE-YTCPHGRPIIVKMSLLDLEKLFKR 636 >gi|150017423|ref|YP_001309677.1| DNA mismatch repair protein [Clostridium beijerinckii NCIMB 8052] gi|189030395|sp|A6LWJ1|MUTL_CLOB8 RecName: Full=DNA mismatch repair protein mutL gi|149903888|gb|ABR34721.1| DNA mismatch repair protein MutL [Clostridium beijerinckii NCIMB 8052] Length = 664 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 187/664 (28%), Positives = 308/664 (46%), Gaps = 75/664 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L+E N+IAAGE++ERP+ +KELIENS+DA + + I GG S +I D+G Sbjct: 3 RINILNEDTANKIAAGEVVERPASVVKELIENSIDANAKNIIIEIEEGGISLIRIIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I A H TSKI S+D NIHT GFRGEALPSI +V + L S+ + G Sbjct: 63 GIYKDDIAKAFLPHATSKIQESEDIYNIHTLGFRGEALPSIASVGKVNLKSKQDEEAFGY 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I+I G K S V +N GTI+EV+DLFF +PAR FLKS E++LI D++ R+++A Sbjct: 123 EISIEGGKASEVTECGINKGTILEVQDLFFNVPARKKFLKSVSKESSLINDIVTRLSLAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PK+SF K+ NG+ + I + G+ +N + ++ S+ IT+ GY G Sbjct: 183 PKISFKLYNNHK---KVLHTFGNGDLKDVIRTIYGKSITDNILYFSDSSDLITVYGYVGT 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 RG+ N +F+N R ++++ + + A+ + ++P +L +E+ P VDVN+ Sbjct: 240 EEIARGSRNNQSIFVNRRYIKNRALAIAVEQAFKSFSTVNKFPFFILFIEVYPEYVDVNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN-----KKGISTSSVLSKKMISSFHQ------- 347 HP K+ I+F + +I I ++ A+ I K+ + +F + Sbjct: 300 HPTKAEIKFNDERMIFKKIFGAVHTALKNEVFETFAIKEEENTKKEPLPTFEEITFKIKE 359 Query: 348 -----------------------DNAPKTHLPKYATSLTN------TQEKLFLQENRLS- 377 N + Y SL N + + +EN Sbjct: 360 EEEKVKFASSAAKTLISQGKDLKANNESSFKSVYDPSLNNINKTIVEESTDYNKENEEPI 419 Query: 378 ---------------TNDLLPSDDPTYSEDNDPVEE---SEATHYQLGIACAQIHQNYII 419 +D + + +++P+E A+ II Sbjct: 420 SIPVDLKPNSYIENLVDDYSDNAEDEIKSNSEPIENVITENKYENIKPNPIAKFPPITII 479 Query: 420 SQTTDGLVIVDQ----HAAHERLIFEKMRQDFNSTKIT-----SQTLLTPEIIDLLEGEC 470 Q ++ + + + EK+ + +I Q L+ P IIDL + Sbjct: 480 GQYNKTYILGEYDGTLYMIDQHAAHEKILFEKYLKEIEEGTIIIQPLIVPSIIDLSIDDY 539 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 + E+ + G E FG ++++++E+P L + N L DI+D + + T + Sbjct: 540 SYFEENKDIFREAGFLLEEFGGSSLSLKEVPYFLGRLNPKNLFLDILDNLKNLGNGKTSE 599 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 + I AT AC +I+ K++ EM +L+ ++ + C HGRP IK DI+K Sbjct: 600 VKHNAI-ATKACKAAIKGNDKLEMNEMIKLIEDLRYIDDPFHCPHGRPVIIKFTSIDIDK 658 Query: 591 LFGR 594 F R Sbjct: 659 KFKR 662 >gi|291543952|emb|CBL17061.1| DNA mismatch repair protein MutL [Ruminococcus sp. 18P13] Length = 657 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 182/662 (27%), Positives = 296/662 (44%), Gaps = 74/662 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L +++ IAAGE+IERP+ IKEL+ENS+DA +SR+ I GG + +ITD+G Sbjct: 1 MSITVLPKELSELIAAGEVIERPASVIKELVENSIDAGASRITVEIRNGGSVYMRITDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+P A RH TSKI + D NIHT GFRGEAL S+ AV + ++++ G Sbjct: 61 CGIAPEEVPTAFLRHATSKILEKADLDNIHTLGFRGEALASVAAVGRVEMLTKQAGAEYG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + I G + GT + +RDLFF +PAR FLK + E+N ++ +++++A++ Sbjct: 121 VRYQIEGGTECGMERTGCPEGTTIVIRDLFFNVPARQKFLKKDVTESNAVSAIVQKIALS 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P+++FT + + +G I V G F + + ++ N I+L+GY Sbjct: 181 HPEIAFTLIRDHRREFH---AAGDGTLYSAIYAVYGRSFAQDLLPVSYSENGISLEGYVI 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P + + N + FINGR V+ + AY + G++P VL+L + P VDVN Sbjct: 238 KPLYAKNNRSLQTFFINGRYVKSVTCSVALEEAYRTLVMTGKFPACVLMLTVPPETVDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQS---------------------IQKAINKKGISTSSVL 337 VHPAK+ +RF + + + + Q A ++ + Sbjct: 298 VHPAKAAVRFTDEKRVSSAVFFGVKNALMQNGLIYEFQMRPTADWQHAPKEQEPGFADAP 357 Query: 338 SKKMISSFHQDNAPKTHLPKYATSL--------------------TNTQEKLFLQENRLS 377 + A +P + + +E L++ +L Sbjct: 358 LPPVPPLESVQPAKPAPMPAHQEAPVPVAAVKPMPVGNVQVTVHAPEPEEALYMHSPKLE 417 Query: 378 TN-------------------------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 DLL E+ + Sbjct: 418 YGAAPAAPEPIREPEPLPETSTVFAGFDLLQDTAAAKQEEPVQAPVPAPEEQPKIRVIGE 477 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 NYI++Q D L I+D+HAAHER++FE+ R S SQ +L + L E Sbjct: 478 AFTNYILAQAGDSLYIIDKHAAHERVLFEQFRD--ASRTPDSQMILNSSELLLSVAEFDA 535 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + + E L + G + P +A+ +P + + N+ +L+ ++ + ++ + Sbjct: 536 LQANQEALKQRGFAFDFSNPPYVAVCAVPVVCASLNLDELVLELAENLV-LGKQDLASTQ 594 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 +E+ L TMAC +IR+G K E+ L E+ N C HGRP +L +IEK F Sbjct: 595 LEDALHTMACKAAIRAGDKNDLSELQALAEEVFGNERIRHCPHGRPVLFELTRHEIEKQF 654 Query: 593 GR 594 R Sbjct: 655 KR 656 >gi|329962617|ref|ZP_08300565.1| DNA mismatch repair protein [Bacteroides fluxus YIT 12057] gi|328529648|gb|EGF56546.1| DNA mismatch repair protein [Bacteroides fluxus YIT 12057] Length = 640 Score = 441 bits (1135), Expect = e-121, Method: Composition-based stats. Identities = 163/644 (25%), Positives = 286/644 (44%), Gaps = 64/644 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DAE+ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQEIHVLVTDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIREATDLFALRTMGFRGEALASIAAVAEVELKTRPANEELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G K+ S V+ G+ V++LFF +PAR FLK+ E + I + R+A+ +P Sbjct: 125 LLIAGSKVESQEAVSCPKGSNFSVKNLFFNVPARRKFLKANSTELSNILNEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F + + + + +RI V G+ + + + + + G+ P Sbjct: 185 EVAFYLYSNDTELFNLPVMP----LRQRIMAVFGKKLNQQLLSVEVNTTMVKVTGFVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + +P+G + E+DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMDAYEQLVPVGEQVSYFIYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + ++++ + + + I +F Q + Sbjct: 301 PTKTEIKFENEQAIWQILSAAVKETLGRFNAVPTIDFDTEDMPDIPAFEQTRPIEPPKVH 360 Query: 358 YATSLTN--------------------TQEKLFLQENRLST------NDLLPSDDPTYSE 391 Y T E L+ + S + + T S+ Sbjct: 361 YNTDFNPFKTSSASSYGGGGSYSRPKVEWEGLYSGVEKASKLNGPMEEEPPIEEAWTISD 420 Query: 392 DNDPVEES------------------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 + V + ++G Q +I++ GL+++DQH Sbjct: 421 TSQEVADEGREPYLEEAGRATASLYGNEPVMEMGAQHLQFKGRFILTSVKSGLMLIDQHR 480 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 AH R++F++ + SQ +L PEI+ L E A++ +DL +G G Sbjct: 481 AHIRVLFDRYISQIRQKQGVSQGVLFPEIVQLPASEAAVLESILDDLAAVGFDLSPLGGG 540 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT-----YTLQDRIENILATMACYGSIRS 548 + AI IP+ + N L+R+++ ++ T+ A I Sbjct: 541 SYAINGIPSGIEGLNPVDLIRNMVHTAMEKGNDVKEEIQTILALTLARAAA------IVY 594 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 G+ + + EM+ L+ + P+ + GR +K DIEKLF Sbjct: 595 GQVLSNDEMSSLVDNLFACPSPNYTPDGRTVLTTIKEEDIEKLF 638 >gi|294783899|ref|ZP_06749221.1| DNA mismatch repair protein MutL [Fusobacterium sp. 1_1_41FAA] gi|294479711|gb|EFG27490.1| DNA mismatch repair protein MutL [Fusobacterium sp. 1_1_41FAA] Length = 646 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 182/656 (27%), Positives = 315/656 (48%), Gaps = 81/656 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N IAAGE++E P+ IKELIENSLDA S ++ + GG I+D+G Sbjct: 8 RIRILDESVSNAIAAGEVVENPTSMIKELIENSLDAGSKEIKLEVWNGGLD-ISISDSGC 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++++RH TSKI+ DD NI T+GFRGEAL SI +VS + L SR + G Sbjct: 67 GMSKEDLLLSIERHATSKITTKDDLFNIRTYGFRGEALSSIASVSKMILSSRTEDSPNGT 126 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G K+++++ + N GT +E++DLF+ PAR FL+ + E I D+ R A+A Sbjct: 127 QMNVLGGKVTNLKDIQKNVGTQIEIKDLFYNTPARKKFLRKDTTEYLNIKDIFLREALAN 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + + ++ I ++ G++++ N + + GY G Sbjct: 187 PNVKFILNIEGKESIR----TSGNGIENAILEIFGKNYLKNFSKFSL--------GYLGN 234 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N + +VFINGR+V+ K + + AY + G+YP ++ L+IDP ++DVNV Sbjct: 235 ANLFKANKDSIFVFINGRSVKSKIVEEAVIAAYHTKLMKGKYPSALIFLDIDPAEIDVNV 294 Query: 300 HPAKSYIRFRNPTIIRNFIIQSI------------------------------------- 322 HP+K ++F N + I + + I Sbjct: 295 HPSKKIVKFANQSKIYDLVKGEIEKFFSDDENFISPHIEVEDEEVETFEEKEEKLEYSNN 354 Query: 323 -----------QKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK--- 368 ++++++ + KK S + +H+ + +N ++ Sbjct: 355 NFLDINDFKDEKESLSQLSVVQKEDYLKKDYSEIKVEKPNISHIENTVKTSSNEIKENIE 414 Query: 369 ----------LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 L +E D + ++ + Q+ ++I Sbjct: 415 TFKKVDNDFDLIEKEVGTEKTKDKYIFDTKDTSRGKIFDDFSSLKNIDFRVIGQVFDSFI 474 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + + + L I DQH HER+++EK++Q++ S +T Q LL P +L E L +E+ E Sbjct: 475 LVERNNLLEIYDQHIIHERILYEKLKQEYYSHSMTKQNLLVPIRFELDPREKQLALENTE 534 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 G + F N I +R P + + + ++++I+D I + +D ENI+ Sbjct: 535 IFSSFGFDIDDFEKNEILLRTTPTMDLRDSYENIIKEILDNISKNKD----KDIRENIIV 590 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +M+C G+I++ K+ EM ++ ++ + C HGRP +K+ L D+EKLF R Sbjct: 591 SMSCKGAIKANHKLTIEEMYSMVAKLHEVGE-YTCPHGRPIIVKMSLLDLEKLFKR 645 >gi|237739097|ref|ZP_04569578.1| DNA mismatch repair protein mutL [Fusobacterium sp. 2_1_31] gi|229423697|gb|EEO38744.1| DNA mismatch repair protein mutL [Fusobacterium sp. 2_1_31] Length = 669 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 181/656 (27%), Positives = 316/656 (48%), Gaps = 81/656 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N IAAGE++E P+ IKELIENSLDA S ++ + GG I+D+G Sbjct: 31 RIRILDESVSNAIAAGEVVENPTSMIKELIENSLDAGSKEIKLEVWNGGLD-ICISDSGC 89 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++++RH TSKI DD NI T+GFRGEAL SI +VS + L SR ++ G Sbjct: 90 GMSKEDLLLSIERHATSKIITKDDLFNIRTYGFRGEALSSIASVSKMILSSRTEDSSNGT 149 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G K+++++ + N GT +E++DLF+ PAR FL+ + E I D+ R A+A Sbjct: 150 QMNVLGGKVTNLKDIQKNVGTQIEIKDLFYNTPARKKFLRKDTTEYLNIKDIFLREALAN 209 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + + ++ I ++ G++++ N + + GY G Sbjct: 210 PNVKFILNIEGKESIR----TSGNGIENAILEIFGKNYLKNFSKFSL--------GYLGN 257 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N + +VFINGR+V+ K + + AY + G+YP ++ L+IDP ++DVNV Sbjct: 258 ANLFKANKDSIFVFINGRSVKSKIVEEAVIAAYHTKLMKGKYPSALIFLDIDPAEIDVNV 317 Query: 300 HPAKSYIRFRNPTIIRNFIIQSI------------------------------------- 322 HP+K ++F N + I + + I Sbjct: 318 HPSKKIVKFANQSEIYDLVKGEIERFFSDDENFISPHIEVEDEEVETFEEKEEKIEYPSN 377 Query: 323 -----------QKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK--- 368 ++++++ + KK S + +H+ + +N ++ Sbjct: 378 NFLDINDFKDEKESLSQLSVVQKEDYLKKDYSEIKVEKPNISHIENTVKASSNEIKENIE 437 Query: 369 ----------LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 L +E + D + ++ + Q+ ++I Sbjct: 438 TFKKVDNDFDLIEKEVETERTNEKYIFDTKDTSRGKIFDDFSSLKNIDFRVIGQVFDSFI 497 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + + + L I DQH HER+++EK++Q++ + +T Q LL P +L E L +E+ E Sbjct: 498 LVERNNLLEIYDQHIIHERILYEKLKQEYYNQSMTKQNLLVPIRFELDPREKQLALENTE 557 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 G + F N I +R P + + + ++++I+D I + +D ENI+ Sbjct: 558 IFSSFGFDIDDFEKNEILLRTTPTMDLRDSYENIIKEILDNISKNKD----KDIRENIIV 613 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +M+C G+I++ K+ EM ++ ++ + C HGRP +K+ L D+EKLF R Sbjct: 614 SMSCKGAIKANHKLTIEEMYSMVAKLHEVGE-YTCPHGRPIIVKMSLLDLEKLFKR 668 >gi|330886597|gb|EGH20258.1| DNA mismatch repair protein [Pseudomonas syringae pv. mori str. 301020] Length = 566 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 181/544 (33%), Positives = 287/544 (52%), Gaps = 32/544 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q G + V+P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QGETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTSRARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S + + + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPENQLGGSVPVAVEPRPTGPEAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN------------------- 393 + L + Q + F + T + Sbjct: 382 GEMRLANNVLEHPQGEPFARPAAGGGAGSGYQYQYTPRPTSGVPVAEAQSAYREFFAPLP 441 Query: 394 ----DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + ES LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + Sbjct: 442 STAPSSLPESPGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMAN 501 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE + + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 502 EGLSGQPLLVPESLAVSQREADCAEEHIATFQRLGFELQRLGPETLAIRQIPALLKQAEA 561 Query: 510 PQLL 513 +L+ Sbjct: 562 NRLV 565 >gi|320353032|ref|YP_004194371.1| DNA mismatch repair protein MutL [Desulfobulbus propionicus DSM 2032] gi|320121534|gb|ADW17080.1| DNA mismatch repair protein MutL [Desulfobulbus propionicus DSM 2032] Length = 612 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 192/610 (31%), Positives = 310/610 (50%), Gaps = 20/610 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR LSE++ NQIAAGE++ERP+ IKEL+ENSLDA + R++ + G G + ++ D+G Sbjct: 3 RIRILSEQLANQIAAGEVVERPASVIKELVENSLDASAGRIDIHVEGSGGTLLRVADDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +++ + ++RH TSKI ++ + I T GFRGEA+PSI +VS +T++SRP G Sbjct: 63 GMDGDDVLLCLERHATSKIREEGQLAAISTLGFRGEAIPSIASVSWMTILSRPQTQELGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I + V GT++EVR LF +PAR FLKS + E + I +V+R A+A+ Sbjct: 123 RAEIRYGTLRDVHQAGCGRGTVIEVRHLFGNMPARKKFLKSARTEMHHIEEVVRNQALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQV--IGEDFINNAVELNEKSNEITLQGYT 237 P+V FT + S + R+ +V E + AV ++ + + L+GY Sbjct: 183 PQVGFTLHVDGRVALEY---SPGADLQRRVREVFRYRETLLPLAVAAEDEGDGMMLEGYL 239 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P + + + +N R VQD I + + G P LLL + P QVDV Sbjct: 240 LLPEAAQATNARLRILVNDRPVQDAMIRHAVVEGLQGFLMKGFQPAGALLLTVSPDQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ-DNAPKTHLP 356 NVHPAK IRFR + FI+ + A+ S L SS L Sbjct: 300 NVHPAKREIRFRRSEAVHRFIVDRVAAAMCGYQQSQRHSLFAPPSSSSRAWPVDSGEALR 359 Query: 357 KYATSLTNTQEKLFLQEN---------RLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 ++T T + Q+ + P+ + V A Sbjct: 360 SVPPAMTMTTAEPVEQQPLPAMDRYGRSTPAMAAPLAAPPSPASPFAVVPSPPAGGAAGL 419 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 Q+ Y++ + LV++DQHAAHERL++ ++RQ + +I QTLL P ++L Sbjct: 420 TLIGQLFSLYLLCEREGQLVVIDQHAAHERLLYGQLRQGYQEAQIPRQTLLFPVTVELTP 479 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID---SS 524 + + + E + LG++AE FG + I+ +PA++S LLR+++D + + Sbjct: 480 AQAETLEQKSEAVAALGLQAEPFGEATVVIKAMPALVSHVEPGGLLREVLDGLRGPLPVA 539 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 T+ ++++LA+MAC +I++G ++Q EM +LL +ME + + C HGRP Sbjct: 540 ADRTVPQAVDDLLASMACKAAIKAGNRLQPAEMLKLLHQMETSEVFTHCPHGRPVVKTFS 599 Query: 585 LSDIEKLFGR 594 ++E+ F R Sbjct: 600 SQEVERWFHR 609 >gi|183221533|ref|YP_001839529.1| DNA mismatch repair protein MutL [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911614|ref|YP_001963169.1| DNA mismatch repair protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|238687783|sp|B0SB85|MUTL_LEPBA RecName: Full=DNA mismatch repair protein mutL gi|238687854|sp|B0ST13|MUTL_LEPBP RecName: Full=DNA mismatch repair protein mutL gi|167776290|gb|ABZ94591.1| DNA mismatch repair enzyme (predicted ATPase) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779955|gb|ABZ98253.1| DNA mismatch repair protein MutL [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 614 Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 168/616 (27%), Positives = 288/616 (46%), Gaps = 30/616 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I LS +INQIAAGE+IE +KELIENS+DA +S++E G ++D+G G Sbjct: 4 IHSLSPDLINQIAAGEVIESTHSILKELIENSIDAGASKIEIATESAGLGRILVSDDGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 +T E++P+A++R+ TSKI D ++ TFGFRGEAL SI +VS L + S N + Sbjct: 64 ITKEDLPLAIKRYATSKIQTFHDLEHLFTFGFRGEALASIASVSRLVIESGTEGNRMAQR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + K+ S + GT +E++DLF+ P R FLK+E E ++ MA+ P Sbjct: 124 VVVEEGKVVSEEEIPFFQGTKIEIKDLFYNTPVRRKFLKTESGEEKKNRTRVQTMALGEP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F + + + + ER+ + GE+ ++ + ++ N +TL+G+ P Sbjct: 184 SIGFRYVQNGKEVFHVQKEEP----LERVLSIYGENLRDHLLPVHSSRNGMTLRGFISHP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F + + + F+N R+V+ KF ++ Y E +P G +P L ++ VDVNVH Sbjct: 240 DFYKSSRMGQFFFVNNRSVELKFSAQILKRCYGELLPSGAFPYAFLFFDLPREFVDVNVH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL----- 355 P K +RF + I + Q I + + + +++ ++ Sbjct: 300 PQKKEVRFLSEETITGILFQGITEVLRTSTPVEFLEMRRRLSMPIPYHSSADKSQFGGEG 359 Query: 356 ---------------PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 + N + L + + D + + ++ Sbjct: 360 MSMGGPGFGFGMAGRGQAVWGSQNEEGNPLLGPSSIEGRAGFSLDGIGAGTNLHLLGDNL 419 Query: 401 ATH--YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 H + I + +I+++ DGL I+DQH AHER+ +E++ +D S SQ+LL Sbjct: 420 TKHNLFVPKKHYGVIFETFILAEAEDGLYIIDQHTAHERIRYEEVLRDLKSKAYKSQSLL 479 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 TP ++L + E ++ LGI E F I IRE+P+ + + + D+ + Sbjct: 480 TPIRLELTKEEAEEMIAEKHRFSELGITLEPFSGGTILIREVPSYIDPGKETETILDLWE 539 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + + +AC +I+ G ++ + LL+ + N S C HGRP Sbjct: 540 RFKSKDPEE--KELYDEMAKCVACRSAIKKGDQVSDPIIGELLQRLSYCENPSLCPHGRP 597 Query: 579 TFIKLKLSDIEKLFGR 594 T IKL D+E +F R Sbjct: 598 TLIKLTRKDLETMFHR 613 >gi|154250378|ref|YP_001411203.1| DNA mismatch repair protein MutL [Fervidobacterium nodosum Rt17-B1] gi|226723039|sp|A7HNR3|MUTL_FERNB RecName: Full=DNA mismatch repair protein mutL gi|154154314|gb|ABS61546.1| DNA mismatch repair protein MutL [Fervidobacterium nodosum Rt17-B1] Length = 588 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 177/604 (29%), Positives = 306/604 (50%), Gaps = 32/604 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+KL ++++++IAAGE++ P+ +KEL+ENSLDA ++ +E I GGKS+ +++DNG G Sbjct: 4 IKKLPQEVVSKIAAGEVVINPASVVKELVENSLDANATSIEVQIRNGGKSYIKVSDNGIG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ +++ +A+ R TSKIS +D NIH++GFRGEAL SI VS L + S N + Sbjct: 64 MSRDDMLIAIDRFTTSKISALEDIYNIHSYGFRGEALSSIAEVSRLIITS--SDGNNAHR 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G KI + GT VEV DLFF IPAR FL SE+VET ++T+++ + + P Sbjct: 122 LEVIGGKIIKITETHRERGTTVEVYDLFFNIPARRKFLSSEKVETRMVTEIVEKFMLVQP 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 VSF F Y ++ G+ +R S + E + +E +S + + G P Sbjct: 182 SVSFVFKIEDEIVYN----ASKGSLEDRFSIIFPEVKEFSLIE-PLQSEIMQISGIISSP 236 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + R N + F+N R V D + + Y E + G +P V+ L+ P ++DVN+H Sbjct: 237 QYTRRNRSGQIFFVNKRFVIDNLLNLSFERGYGEALAQGEHPYGVIFLDFLPDKIDVNIH 296 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV------LSKKMISSFHQDNAPKTH 354 P K ++F +P + N I ++I+ + K S+ K +Q+ + + Sbjct: 297 PQKLQVKFSDPQNVYNEIARTIRTTLRKFSFFQMSISKNSEEEEKYSSEISNQNLKAENY 356 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 + N + L+ +E + P + + + E + Sbjct: 357 QHTDSEWYPNQFKNLYQKETPQTYRPYEPLSSISQNLLLPQLNEKSLP-----KEFIVLK 411 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 YI+ + DGLVI+D HAAHER+I+E+++ K + LL P I L + L Sbjct: 412 DRYIVFEDLDGLVIIDFHAAHERIIYEQLK----ENKFETVQLLIPLHIKLGKSFLQLSQ 467 Query: 475 EHDEDLHRLGIKAE----RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 + ++ + G E G + I++IP+IL + + ++++ + + Sbjct: 468 QLTDEFKKYGFDFEIKTLEDGSGEVVIKQIPSILKVTDASNVFLEVLE---EYRIPFEKP 524 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 + +LA+ AC ++++G K+ E+ ++++E+ K+ N C HGRP +KL S ++ Sbjct: 525 KGLTYVLASKACKSAVKTGDKLSHDEVQQIIKEI-KSKNLLTCPHGRPIMMKLSFSQLDS 583 Query: 591 LFGR 594 F R Sbjct: 584 FFER 587 >gi|325956128|ref|YP_004286738.1| DNA mismatch repair protein [Lactobacillus acidophilus 30SC] gi|325332693|gb|ADZ06601.1| DNA mismatch repair protein [Lactobacillus acidophilus 30SC] Length = 626 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 178/636 (27%), Positives = 301/636 (47%), Gaps = 57/636 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+ENSLDA ++R+ G + DNG Sbjct: 3 KIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKIS+ D + T GFRGEAL SI AVSH+ +++ G Sbjct: 63 GIERDQVDLAFTRHATSKISNEHDLFKVSTLGFRGEALASISAVSHVEILTAT-DGAIGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG A GT + V+DLFF PARL +L+S + E I D+I R+A+ Y Sbjct: 122 RATFSGGNKKGQEDAASQKGTKITVQDLFFNTPARLKYLRSPRTEIMKIVDIINRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSFT S + + NGN + ++ V G ++ + + + G Sbjct: 182 PQVSFTLSNTGKI---LLRTTGNGNLKQTVANVYGRHIAEKMEDIEAEDTDFKVTGLISK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N + +NGR +++ + + I Y + + YP+ V+ +++DP VDVNV Sbjct: 239 PELTRSTRNFISILLNGRYIRNFQLNTAIMDGYGSKLEVRHYPIAVVSIKVDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------VLSKKMISSFHQDNA 350 HP K +R + I +I A+ +K TS+ L ++ + +QD Sbjct: 299 HPTKQEVRLSKEKELSRLITTAISNALVEKVEQTSAFANLENKRETLVDQLQFNLNQDVV 358 Query: 351 P-----------KTHLPKYATS-------------------LTNTQEKLFLQENRLSTND 380 + PK+ + +T T ++ ++ +L+ Sbjct: 359 NTERKEVPEIHDQVEKPKFKATKETGKYVDLNIPRENDKYIITKTWDQNVEEQQKLTPFG 418 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 P++ S ++ + + +G YII++ L ++DQ AA RL F Sbjct: 419 ASPANQEVISSGDEVLANNLPRLAYVGQT-----DTYIIAENEGDLFLIDQVAARRRLQF 473 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 EK Q S KI Q LLTP +++L + I + E + ++GI E FG N+ +R Sbjct: 474 EKTYQILASKKIVQQGLLTPIVLELGNLDFIQIKDKLEQIKQIGIYLEEFGQNSFIVRSY 533 Query: 501 PAILSKKNIPQLLRDIIDEI--IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 P + + NI + +R I+D +D + L R+ + A ++ + + E Sbjct: 534 PTWIHE-NIEETIRQILDSYLNLDKGQSEKLFKRVAEMEA----KHAVTGKIDLSAAEAK 588 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ ++ K + GR +++ ++++K+F R Sbjct: 589 QIISDLRKTADPYHDASGRLVLVRMSQNELKKMFKR 624 >gi|206890464|ref|YP_002249870.1| DNA mismatch repair protein MutL [Thermodesulfovibrio yellowstonii DSM 11347] gi|238058938|sp|B5YIZ6|MUTL_THEYD RecName: Full=DNA mismatch repair protein mutL gi|206742402|gb|ACI21459.1| DNA mismatch repair protein MutL [Thermodesulfovibrio yellowstonii DSM 11347] Length = 544 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 179/595 (30%), Positives = 296/595 (49%), Gaps = 55/595 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E I+ +I+AGE++ERP+ +KELIENS+DA ++ + I G + ++ D+G Sbjct: 3 RIKILPETIVGKISAGEVVERPASVVKELIENSIDAGANSISVYIKEFGIAEIKVIDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ S+++ +A QRH TSKI D D I + GFRGEAL SI VS L ++++ +TG Sbjct: 63 GIPSDDVILAFQRHATSKIKDEKDLQRISSLGFRGEALYSIANVSKLKIITQYKDEDTGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ++G + S +PV GT VE+RDLFF P R FLKS E I + ++ +AY Sbjct: 123 EVYLTGGNLVSQKPVV-TKGTTVEIRDLFFNTPVRRKFLKSSYTEKAHIIETVQNYCLAY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF+ + + +RISQV G +F + ++ + G Sbjct: 182 PEISFSLFIDREEVLNI---PQVKTLYDRISQVFGLEFTEKLKFKTISKDNYKIELFLGG 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + + +F+N R V+D I++TI A+ +P + + + P VD NV Sbjct: 239 EELLRKSKGRQLIFVNRRPVKDFSIVNTIYKAFHI---NENHPQFFIFINLPPEDVDFNV 295 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +RFR P II I + +++ + +S + + + D + + + + Sbjct: 296 HPAKKEVRFREPQIIHQLIFR-----MSEYQVKSSMIAEETNQWKVNADLSSISQISAFY 350 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 T +E++F I ++ Sbjct: 351 TESIFNKEEIF--------------------------------------HFFSIGDAIVV 372 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 Q DG+V +D HAAHER+ FEK+ + L P +I+L + LI E+ Sbjct: 373 IQRVDGIVFLDFHAAHERVNFEKILNKMSEQ---IVKLTFPHVINLNPQDYVLIKENLHI 429 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L+ LGI+AE FG N+I IR +P I+ +I ++ +I + + ++T + I AT Sbjct: 430 LNELGIEAEDFGENSIVIRALPEIIKYIDIAGMIENIALTLKEGTSTPDFIEIKRKIAAT 489 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC+ S+R+ K+ E+ LL+E+E+ + C HGRP + L +I+K F R Sbjct: 490 IACHSSLRANEKINHFEIKALLQELERTSDPEHCPHGRPVRKFISLDEIKKWFLR 544 >gi|58336746|ref|YP_193331.1| DNA mismatch repair protein [Lactobacillus acidophilus NCFM] gi|227903307|ref|ZP_04021112.1| DNA mismatch repair protein [Lactobacillus acidophilus ATCC 4796] gi|81311521|sp|Q5FLX4|MUTL_LACAC RecName: Full=DNA mismatch repair protein mutL gi|58254063|gb|AAV42300.1| DNA mismatch repair protein [Lactobacillus acidophilus NCFM] gi|227868936|gb|EEJ76357.1| DNA mismatch repair protein [Lactobacillus acidophilus ATCC 4796] Length = 631 Score = 438 bits (1127), Expect = e-120, Method: Composition-based stats. Identities = 177/636 (27%), Positives = 290/636 (45%), Gaps = 52/636 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+ENSLDA ++R+ G + DNG Sbjct: 3 KIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKIS+ D + T GFRGEAL SI AVSH+ +++ G Sbjct: 63 GIARDQVDLAFTRHATSKISNEHDLFKVATLGFRGEALASISAVSHVEILTATKGA-IGV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG A GT + VRDLFF PARL +L+S + E I D+I R+A+ Y Sbjct: 122 KATFSGGNKKGQEDAAAREGTQITVRDLFFNTPARLKYLRSPRTEIMKIVDIINRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT S + NGN + ++ V G E K N+ + G Sbjct: 182 PSVSFTLSNTGK---VLLRTPGNGNLKQTVANVYGRHIAEKMEEFEAKDNDFKISGLMSK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N + +NGR +++ + + I Y + YP++VL +++DP VDVNV Sbjct: 239 PELTRSTRNFVSILLNGRYIRNFQLNTAIMDGYGAKLAARHYPIIVLAIQVDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------VLSKKMISSFHQDNA 350 HP K +R + I +I KK TS+ L ++ + +Q+ Sbjct: 299 HPTKQEVRLSKEKELSRLITSTISNVFIKKTEQTSAFANLENKRETLVDQLQFNLNQNVV 358 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV-------------- 396 N + + + + D ED+ + Sbjct: 359 NTARKKTPEIHENNEKPEFLAKPKKPEEEKTDYVDLNIPREDDKYIITKTWDKNVLLQQD 418 Query: 397 -----------------EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 +E+ A + QI YII++ L ++DQ AA RL Sbjct: 419 LRPFSNTLCDSEVISSGDETLANNLPQLSYIGQIDT-YIIAENNSDLFLIDQVAARRRLQ 477 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 FEK+ + S KI Q LLTP +++ + I + + + ++GI E FG N+ +R Sbjct: 478 FEKIYEMLLSKKIVQQGLLTPIVLEFGNLDFIQIKDKIDQIKQIGIYLEDFGQNSFIVRS 537 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY-GSIRSGRKMQSIEMN 558 P + ++ + +R I+D ++ + ++ + + A A S + + + E + Sbjct: 538 YPTWI-HNDVEETIRQILDGYLNLDKGKS-ENLFKRVAAMQAKRDISGKIN--LAAAEAS 593 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++L ++ K + GR +++ ++++K+F R Sbjct: 594 QILIDLRKTEDPYHDADGRLVLVRMSENELKKMFKR 629 >gi|260494854|ref|ZP_05814984.1| DNA mismatch repair protein MutL [Fusobacterium sp. 3_1_33] gi|260198016|gb|EEW95533.1| DNA mismatch repair protein MutL [Fusobacterium sp. 3_1_33] Length = 648 Score = 438 bits (1126), Expect = e-120, Method: Composition-based stats. Identities = 185/659 (28%), Positives = 318/659 (48%), Gaps = 84/659 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N IAAGE++E P+ IKELIENSLDA S ++ + GG I+D+G Sbjct: 7 RIRILDESVSNAIAAGEVVENPTSMIKELIENSLDAGSKEIKLEVWNGGLD-ISISDSGC 65 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++++RH TSKI +D NI T+GFRGEAL SI +VS + L SR G Sbjct: 66 GMSKEDLLLSIERHATSKILTKEDLFNIRTYGFRGEALSSIASVSKMILSSRTEDMQNGT 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G K+++++ + N GT +E++DLF+ PAR FL+ E E I D+ R A+A Sbjct: 126 QMNVLGGKVTNLKDIQRNVGTQIEIKDLFYNTPARKKFLRKENTEYLNIKDIFLREALAN 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + K ++ I ++ G++++ N + + GY G Sbjct: 186 PNVKFILNIEGKESIK----TSGNGIENAILEIFGKNYLKNFSKFSL--------GYLGN 233 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N + +VFINGR+V+ K + + AY + G+YP ++ LE++P ++DVNV Sbjct: 234 ANLFKANRDSLFVFINGRSVKSKIVEEAVIAAYHTKLMKGKYPTALIFLEVEPNEIDVNV 293 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAI--------------------------------- 326 HP+K ++F N I + + I+ Sbjct: 294 HPSKKVVKFANQNAIFDLVKGEIENFFIDDENFISPYIEVDNEVEDNTKNNFLDINDFKD 353 Query: 327 NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDD 386 + + S SV+ K+ S + + + + T T+ + E + + ++ D+ Sbjct: 354 DMQDFSQLSVVKKEDYSKKNYRDIEVEKEKTFGNAGTTTENSINQNEIKEDSKNIENFDN 413 Query: 387 PTYSEDN-------------DPVEESEATHYQLGIACAQIHQNY---------------- 417 + + + E ++ Q + +I ++ Sbjct: 414 SVKNSISVDKNKVEINDDIIEKSENNKYIFNQEDVNRGKIFDDFSSLKNIDFKVIGQVFD 473 Query: 418 --IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 I+ + L I DQH HER+++EK++Q++ + ++ Q LL P +L E L +E Sbjct: 474 TFILVERNGLLEIYDQHIIHERILYEKLKQEYYNHSMSKQNLLVPIRFELDPREKQLALE 533 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 + E G + F N I +R IP + + + ++R+I+D I + +D EN Sbjct: 534 NIEIFSSFGFDIDDFDKNEILLRSIPTMNLRDSYENIIREILDNISKNKD----KDIREN 589 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 I+ +M+C G+I++ K+ EM ++ ++ + C HGRP +K+ L D+EKLF R Sbjct: 590 IIVSMSCKGAIKANHKLTLEEMYSMVAKLHEVGE-YTCPHGRPIIVKMSLLDLEKLFKR 647 >gi|300712236|ref|YP_003738050.1| DNA mismatch repair protein MutL [Halalkalicoccus jeotgali B3] gi|299125919|gb|ADJ16258.1| DNA mismatch repair protein MutL [Halalkalicoccus jeotgali B3] Length = 649 Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 182/636 (28%), Positives = 295/636 (46%), Gaps = 49/636 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + +++IAAGE++ERP+ +KEL+ENSLDA ++ + + GG+ ++ D+G G Sbjct: 8 IRALDPETVDKIAAGEVVERPASVVKELVENSLDAGATGITVAVGSGGRDRIRVADDGVG 67 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 M + AV++H TSK+ D D + T GFRGEAL +IGAVS L + ++P + TG Sbjct: 68 MNEGSVRKAVEQHTTSKLRDVADLERGVSTLGFRGEALYTIGAVSRLAITTKPRGSETGT 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ++G ++ SV P GT VEV DLF+ PAR +LK E E + + V+ R A+A Sbjct: 128 KLVLAGGEVESVEPAGCPEGTAVEVTDLFYNTPARKKYLKREATEFDHVNTVVTRYALAN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN--EKSNEITLQGYT 237 P V F + + G+ + V G + V + L GY Sbjct: 188 PGVRFALEHDGREVF---STTGQGDLQATVLSVYGREVARAMVPIEGLAAGPLEGLSGYV 244 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R + ++NGR V+ K I S + AY + RYP VL L++ P VDV Sbjct: 245 SDPETTRSSPAYVSTYVNGRYVRSKPIRSAVVGAYGTQLAPDRYPFAVLDLDVSPGTVDV 304 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG-----------------ISTSSVLSKK 340 NVHP K +RF + I I +++++ + G I+ S+ + Sbjct: 305 NVHPRKMEVRFGDGEAIEAQIEKTVRETLLDHGLIRSSAPRGRSTPEETEIAPSADGTDG 364 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 + ++ P+ T + R + +D P + + PVE E Sbjct: 365 TDGAAGSNDTPEPGSGAGGDRPTGASRQAGEALKRSNDAADGANDTPRSAASSPPVEREE 424 Query: 401 ATHYQL----------------------GIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 +T + QI Y++ GL++VDQHAA ER+ Sbjct: 425 STEKRFSSLTRQATFGEPDEPNYERLPDLRVLGQIQDTYVLCAAPKGLLVVDQHAADERV 484 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 +E++R + T+QTL+ P ++L E L H+ L R+G A R G + I Sbjct: 485 HYERLRAELAGET-TTQTLVEPVELELTAREAELFDAHEGALARVGFAATREG-RTVRIG 542 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 +PA P+LLRD + + T++ ++ +L +ACY ++ ++ + Sbjct: 543 AVPAAFDATLSPELLRDALSACLSGDPGETVEATVDELLGDLACYPAVTGNTSLREGSVV 602 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL ++ N C HGRPT I++ ++ + F R Sbjct: 603 DLLGALDGCENPYACPHGRPTVIRIDREELAERFER 638 >gi|323699156|ref|ZP_08111068.1| DNA mismatch repair protein MutL [Desulfovibrio sp. ND132] gi|323459088|gb|EGB14953.1| DNA mismatch repair protein MutL [Desulfovibrio desulfuricans ND132] Length = 639 Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats. Identities = 181/646 (28%), Positives = 287/646 (44%), Gaps = 68/646 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + NQIAAGE++ERP+ +KEL+EN+LDA ++RV+ I GG++ + DNG G Sbjct: 7 IRVLPPGLKNQIAAGEVVERPASVVKELVENALDAGATRVDVTIEQGGRALIVVQDNGSG 66 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRP-------P 113 + + ++ +AV RH TSKI D D S+I +FGFRGEALPSI +VS T+ SR Sbjct: 67 IPASQLALAVTRHATSKIRDFHDLSDIGSFGFRGEALPSIASVSRFTMTSRAGGVEGPDE 126 Query: 114 QNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR 173 A I + ++++ P A+ GT VEVRDLF PARL FLK+E E DV+ Sbjct: 127 GPAEAAFIEVRAGEVTATGPAALASGTRVEVRDLFAATPARLKFLKAETTENRRCQDVLM 186 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 R+++A+ V+F+ + +++ + +R++ + + Sbjct: 187 RVSLAHLHVAFSLTVGGRELFRL---PPDQTLADRLAAFWPPAVCQGLKPFDCGRDGYRA 243 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G G P +G ++ +++NGR VQDK +L+ +R AY + YP +VL L++ Sbjct: 244 HGAAGSPNTAQGRGDRILLYVNGRPVQDKRMLAAVRQAYKGMLLSREYPQIVLFLDLPRD 303 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI--------------------------- 326 QVDVNVHPAK +RF + + + I + +A+ Sbjct: 304 QVDVNVHPAKLEVRFLDEHRVFSAIRSGVLQALSGPDGEIASGCVSPERQDQAPSAFGPG 363 Query: 327 --------------NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ 372 + + + +F +D A LP + + Sbjct: 364 PAFPPDRDPAEPARSTHRPAAFADAKFSTYRAFREDRARALDLPVTPSGFPAPGRPGTAE 423 Query: 373 E----NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 R + D + + QI Y++ + + +++ Sbjct: 424 PAPTLAREAGPDGPRFEPAGPEPARPDALRPASLAGGGYTYLGQIADTYLVLRRGEDMLL 483 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 VDQHAAHER++ MR K SQ L + L E ++ + EDL +G E Sbjct: 484 VDQHAAHERILLAAMRD--QRKKGDSQPLALALELPLHPSEAEVLADLREDLRAMGFVIE 541 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 GP +R IP L + L+D + E ++++ MAC +I++ Sbjct: 542 LDGPAKALVRGIPPTLETGEAREYLKDALAE---------KARGLDDLWTMMACKTAIKA 592 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + E LL P C HGRP ++ D+EKLF R Sbjct: 593 RQPLAVDEALALLETWLVTPEREFCPHGRPVVLRWTPGDLEKLFKR 638 >gi|154494374|ref|ZP_02033694.1| hypothetical protein PARMER_03729 [Parabacteroides merdae ATCC 43184] gi|154085818|gb|EDN84863.1| hypothetical protein PARMER_03729 [Parabacteroides merdae ATCC 43184] Length = 621 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 174/631 (27%), Positives = 288/631 (45%), Gaps = 54/631 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RP+ +KEL+EN++DA + ++ I G++ Q+ D+G G Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASVVKELVENAVDAGAGHIQVNIKDAGRTLVQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKIS DD ++HT GFRGEAL SI AVS + L +R G Sbjct: 65 MSETDARMAFERHATSKISTADDLFSLHTMGFRGEALASIVAVSQVELRTRLKGAELGTH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + SG ++ SV P A G+I V++LFF +PAR FLKS + E I + R+A+ Sbjct: 125 LVFSGSELESVEPDACTEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFERIALVNS 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+ + + + + +RI V G+ + ++ +S+ +T+ G+ G P Sbjct: 185 QVALSLYHNDTEIFNLP----ESGLRQRIVNVYGKTLNQKLLSVDAQSSLVTISGFVGRP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + Y F+NGR ++ + + AY + IP G P + +DP +DVN+H Sbjct: 241 DSAKKRGALQYFFVNGRFMKHPYFHKAVMQAYEQLIPAGEQPNYFIYFTLDPATIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ I+F N I ++ + ++A+ K + + N K P A Sbjct: 301 PTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFDVEDAIDIPVYNPVKEAAPYKAP 360 Query: 361 -----SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT------------- 402 S N E ++ + L + + E + + Sbjct: 361 RVQVNSGYNPFETSSYKKPEFDWSKLYNDFEGDRNAIRQGAELTGSFLAPDISEPTIEAD 420 Query: 403 -----------HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 + C Q YII+ GL ++DQH AH R++F++ + + Sbjct: 421 EVAVQDTSGSLFNDVSNPCYQYKGKYIITSLKSGLALIDQHRAHVRILFDQYITNIRQQR 480 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 SQ +L PEI++ E ++ ED+ +G G N+ AI +PA + + Sbjct: 481 GASQQVLFPEIVEFTASEATVLPTLLEDMRFIGFDLTNLGNNSYAINGLPAGVENLDPVS 540 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMAC---------YGSIRSGRKMQSIEMNRLLR 562 L+R+++D +ID+ + E I C +IR G+ + EM+ LL Sbjct: 541 LIRNMVDRVIDTG-----CEVHEEI-----CDSLALSLAKAAAIRPGKILSGEEMDNLLA 590 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + S+ G+ KL ++EK F Sbjct: 591 SLFSCQESNLTPDGKTIISKLTDEELEKRFK 621 >gi|293321556|emb|CAQ52812.2| mutL [Pseudomonas avellanae] Length = 560 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 190/558 (34%), Positives = 299/558 (53%), Gaps = 31/558 (5%) Query: 68 IPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISG 125 +P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Q+ G Sbjct: 1 MPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAWQVETEG 60 Query: 126 EKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF 184 + + +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A V+F Sbjct: 61 RDMDARVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLHEVIKRMALARFDVAF 120 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNR 244 ++ + R+S + G F+ A+ + + N + L G+ G+PTF+R Sbjct: 121 HLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNGLHLWGWVGLPTFSR 180 Query: 245 GNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKS 304 A+ Y F+NGR V+ + +R AY + + GR+P VL E+DP VDVNVHP K Sbjct: 181 SQADLQYFFVNGRAVRRQTGAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVNVHPTKH 240 Query: 305 YIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 +RFR+ ++ +F+ ++ +A+ N+ G S ++ + P+ + Sbjct: 241 EVRFRDGRMVHDFLYGTLHRALGDVRPENQLGGSVPVAAEPRLTGPDAGEFGPQGEMRLA 300 Query: 359 ATSLTNTQEKLFLQE--------------NRLSTNDLLPSDDPTYSED--------NDPV 396 L Q + F + R +T + Y E + Sbjct: 301 NNVLEQPQGEPFARPAGSGSGSGYQYQYSPRPTTGVPVAEAQSAYREFFAPLPGTTPSAL 360 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 ES + LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + ++ Q Sbjct: 361 PESPSDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMANEGLSGQP 420 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 LL PE I + + E EH RLG + +R GP +AIR+IPA+L + +L+ D+ Sbjct: 421 LLVPESIAVSQREADCAEEHITTFQRLGFELQRLGPETLAIRQIPALLKQAEANRLVSDV 480 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 + ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME S QCNHG Sbjct: 481 LADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMESTERSGQCNHG 540 Query: 577 RPTFIKLKLSDIEKLFGR 594 RPT+ ++ LSD++KLF R Sbjct: 541 RPTWTQMGLSDLDKLFLR 558 >gi|294785887|ref|ZP_06751175.1| DNA mismatch repair protein MutL [Fusobacterium sp. 3_1_27] gi|294487601|gb|EFG34963.1| DNA mismatch repair protein MutL [Fusobacterium sp. 3_1_27] Length = 648 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 187/659 (28%), Positives = 318/659 (48%), Gaps = 84/659 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N IAAGE++E P+ IKELIENSLDA S ++ + GG I+D+G Sbjct: 7 RIRILDESVSNAIAAGEVVENPTSMIKELIENSLDAGSKEIKLEVWNGGLD-ISISDSGC 65 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++++RH TSKI DD NI T+GFRGEAL SI +VS + L SR G Sbjct: 66 GMSKEDLLLSIERHATSKIFTKDDLFNIRTYGFRGEALSSIASVSKMILSSRTEDMQNGT 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G K+++++ + N GT +E++DLF+ PAR FL+ E E I D+ + A+A Sbjct: 126 QMNVLGGKVTNLKDIQRNIGTQIEIKDLFYNTPARKKFLRKENTEYLNIKDIFLKEALAN 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + K ++ I ++ G++++ N + + GY G Sbjct: 186 PNVKFILNIEGKESIK----TSGNGIENAILEIFGKNYLKNFSKFSL--------GYLGN 233 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N + +VFINGR+V+ K + + AY + G+YP ++ LE++P ++DVNV Sbjct: 234 ANLFKANRDSIFVFINGRSVKSKIVEEAVIAAYHTKLMKGKYPTALIFLEVEPSEIDVNV 293 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------KGISTSSVLSKKMISSFHQDNAPKT 353 HP+K ++F N I + + I+ I + + + + ++F N K Sbjct: 294 HPSKKVVKFANQNAIFDLVKGEIENFFTDDEDFISPYIESENEVEENTKNNFLDINDFKD 353 Query: 354 HLPKYAT---------------SLTNTQEKLFLQ-----ENRLSTNDLLPSDDPTYSEDN 393 + ++ + +EK F EN +++N++ + DN Sbjct: 354 DVQDFSQLSVVKKEDYSKKDYKDIEIEKEKTFGNAGTTTENAINSNEIKEDSKNIENFDN 413 Query: 394 --------------------DPVEESEATHYQLGIACAQIHQNYII-------------- 419 + E ++ Q ++ +I ++ Sbjct: 414 SVKNLIPVNKNKVEINDGIIEKSENNKYIFNQEDVSRGKIFDDFSSLKNIDFKVIGQVFD 473 Query: 420 ----SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 + L I DQH HER+++EK++Q++ + ++ Q LL P +L E L +E Sbjct: 474 TFILVERNGLLEIYDQHIIHERILYEKLKQEYYNHSMSKQNLLVPIRFELDPREKQLALE 533 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 + E G + F N I +R IP + + + + R+I+D I + D EN Sbjct: 534 NTEIFSSFGFDIDDFDKNEILLRSIPTMNLRDSYENIFREILDNISKNKDI----DIREN 589 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 I+ +M+C G+I++ K+ EM ++ ++ + C HGRP +K+ L D+EKLF R Sbjct: 590 IIVSMSCKGAIKANHKLTIEEMYSMVAKLHEVRE-YTCPHGRPIIVKMSLLDLEKLFKR 647 >gi|315037643|ref|YP_004031211.1| DNA mismatch repair protein [Lactobacillus amylovorus GRL 1112] gi|312275776|gb|ADQ58416.1| DNA mismatch repair protein [Lactobacillus amylovorus GRL 1112] Length = 626 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 176/636 (27%), Positives = 299/636 (47%), Gaps = 57/636 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+ENSLDA ++R+ G + DNG Sbjct: 3 KIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKIS+ D + T GFRGEAL SI AVSH+ +++ G Sbjct: 63 GIERDQVDLAFTRHATSKISNEHDLFKVSTLGFRGEALASISAVSHVEILTAT-DGAIGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG A GT + V+DLFF PARL +L+S + E I D+I R+A+ Y Sbjct: 122 RATFSGGNKKGQEDAASQKGTKITVQDLFFNTPARLKYLRSPRTEIMKIVDIINRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSFT S + + NGN + ++ V G ++ + + + G Sbjct: 182 PQVSFTLSNTGKI---LLRTTGNGNLKQTVANVYGRHIAEKMEDIEAEDTDFKVTGLISK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N + +NGR +++ + + I Y + + YP+ V+ +++DP VDVNV Sbjct: 239 PELTRSTRNFISILLNGRYIRNFQLNTAIMDGYGSKLEVRHYPIAVVSIKVDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------VLSKKMISSFHQDNA 350 HP K +R + I +I A+ +K TS+ L ++ + +QD Sbjct: 299 HPTKQEVRLSKEKELSRLITTAISNALVEKVEQTSAFANLENKRETLVDQLQFNLNQDVV 358 Query: 351 P-----------KTHLPKYATS-------------------LTNTQEKLFLQENRLSTND 380 + PK+ + +T T ++ ++ +L+ Sbjct: 359 NTERKEVPEIHDQVEKPKFKAAKETGKYVDLNIPRENDKYVITKTWDQNVEEQQKLTPFG 418 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 ++ S ++ + + +G YII++ L ++DQ AA RL F Sbjct: 419 ASSANQEVISSGDEVLANNLPRLAYVGQT-----DTYIIAENEGDLFLIDQVAARRRLQF 473 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 EK Q S KI Q LLTP +++ + I + E + ++GI E FG N+ +R Sbjct: 474 EKTYQILASKKIVQQGLLTPIVLEFGNLDFIQIKDKLEQIKQIGIYLEEFGQNSFIVRSY 533 Query: 501 PAILSKKNIPQLLRDIIDEI--IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 P + + NI + +R I+D +D + L R+ + A ++ + + E Sbjct: 534 PTWIHE-NIEETIRQILDSYLNLDKGQSEKLFKRVAEMEAE----HAVTGKIDLSAAEAK 588 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ ++ K + GR +++ ++++K+F R Sbjct: 589 QIINDLRKTADPYHDASGRLVLVRMSQNELKKMFKR 624 >gi|124485988|ref|YP_001030604.1| DNA mismatch repair protein [Methanocorpusculum labreanum Z] gi|166232096|sp|A2SSN1|MUTL_METLZ RecName: Full=DNA mismatch repair protein mutL gi|124363529|gb|ABN07337.1| DNA mismatch repair protein MutL [Methanocorpusculum labreanum Z] Length = 588 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 161/600 (26%), Positives = 288/600 (48%), Gaps = 22/600 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVI--AGGGKSFFQITDN 59 +++ L E+ I+ IAAGE++ER + +KEL+EN++DA++ + I G + +TD+ Sbjct: 3 RVKILDEETISHIAAGEVVERAASVVKELVENAVDADAQIIRIGISADKTGITKISVTDD 62 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM ++ +A ++H TSKIS +D I T GFRGEAL SI A+S +T ++ + + Sbjct: 63 GIGMDFDDALLAFRQHATSKISRPEDLDGITTLGFRGEALASIAAISKVTFTTKERGSPS 122 Query: 118 --GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 A++ I G ++ S V GT V + LF+ PAR F KS E + + D++ R+ Sbjct: 123 PEAARVVIHGGELISHSAVGAPEGTSVLIDALFYNTPARRKFQKSVPTELSHVYDMVERI 182 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A++ +SF R++ G++P+ I+ V G F ++ + + G Sbjct: 183 ALSNRNISFVLLYNGKERFQTF---GTGSYPDVIAAVFGSTFSKELTPVSGSFGPVKIDG 239 Query: 236 YTGIPTFNRGNA-NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 + P +FY+ INGR V + + IR Y +P G YP L + +DPR Sbjct: 240 WITRPGSEMKTTQTRFYLSINGRQVTSRQLQWAIREGYGTLLPKGMYPAAFLDIVLDPRD 299 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHP K +R + + ++ +++++ V S + + ++ Sbjct: 300 VDVNVHPTKREVRLSREREVMRCVQDAVYTSLHEER-----VFSTAPMPTLARETITTLP 354 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 + + K + E R + L ++ ++ + E++ ++ Sbjct: 355 VEIVGEPVPVYAGKQEMHEARQAP--LKQTEKQLRRTESADLPETDLFVPEVLGQIG--D 410 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 + + L++VDQHAAHER++++++ +S + Q L+ P+ I L + E A + Sbjct: 411 TYILAKNESGDLIVVDQHAAHERIMYDQLLARSSSAE-AGQELIVPQPITLSKKETAALP 469 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 + + L G E FG + +R +P + S P + I+D +D + ++ Sbjct: 470 DLLDVLAAAGYLLEPFGKDVWMVRSVPVVSSTLGDPDTIHAILDAALD--GVGNTDEVLD 527 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +L T AC ++ + +M RLLR++ + C HGRPT I L S + +F R Sbjct: 528 RVLKTAACRAVVKGNTPLTIEQMQRLLRQLMATKSPYTCPHGRPTTIVLSKSRLAGMFLR 587 >gi|319900075|ref|YP_004159803.1| DNA mismatch repair protein MutL [Bacteroides helcogenes P 36-108] gi|319415106|gb|ADV42217.1| DNA mismatch repair protein MutL [Bacteroides helcogenes P 36-108] Length = 644 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 166/648 (25%), Positives = 283/648 (43%), Gaps = 68/648 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DAE+ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQEIHVLVTDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI + D + T GFRGEAL SI AV+ + L +RP G + Sbjct: 65 MSETDARLSFERHATSKIHEAADLFALRTMGFRGEALASIAAVAEVELKTRPASEELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G K+ S V+ G+ V++LFF +PAR FLK+ E + I + R+A+ +P Sbjct: 125 LMIAGSKVESQEAVSCPKGSNFSVKNLFFNVPARRKFLKANSTELSNILNEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F + + + + +RI V G+ + + + + + GY P Sbjct: 185 EVAFYLYSNDTELFNLPVMP----LRQRIMSVFGKKLNQQLLAVEVDTTMVKVSGYVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + IP G + E+DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMDAYEQLIPAGEQISYFIYFEVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDN-------A 350 P K+ I+F N I + ++++ + + + I +F Q Sbjct: 301 PTKTEIKFENEQAIWQILSAAVKETLGRFNAVPTIDFDTEDMPDIPAFEQARPIEPPKVH 360 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES----------- 399 T + TS + + L + S N+PVEE Sbjct: 361 YNTDFNPFKTSSAPSSSYGGDYSRPKMEWEGLYAGVEKASRMNEPVEEELFSEDGREAPS 420 Query: 400 ------------------------------EATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + G Q +I++ GL+++ Sbjct: 421 APLEEMPDGGGMPFLRESAGDTVSSSSLYGDEPVIEKGGRHLQFKGRFILTSVKSGLMLI 480 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQH AH R++FE+ + SQ +L PEI+ L E A++ + DL +G Sbjct: 481 DQHRAHIRVLFERYLGQIRQKQGVSQGVLFPEIVQLPASEAAVLEDISGDLAAVGFDLSP 540 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT-----YTLQDRIENILATMACYG 544 G + AI IP+ + + L+R+++ ++ T+ A Sbjct: 541 LGGGSYAINGIPSGIEGLSPVDLIRNMVHTAMEKGNDVKEEVQTILALTLARAAA----- 595 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 I G+ + + EM+ L+ + P+ + G +K DIEKLF Sbjct: 596 -IVYGQVLSNDEMSNLVDSLFACPSPNYTPDGHTVLATIKEEDIEKLF 642 >gi|256844832|ref|ZP_05550290.1| DNA mismatch repair protein mutL [Fusobacterium sp. 3_1_36A2] gi|256718391|gb|EEU31946.1| DNA mismatch repair protein mutL [Fusobacterium sp. 3_1_36A2] Length = 648 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 188/659 (28%), Positives = 317/659 (48%), Gaps = 84/659 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N IAAGE++E P+ IKELIENSLDA S ++ + GG I+D+G Sbjct: 7 RIRILDESVSNAIAAGEVVENPTSMIKELIENSLDAGSKEIKLEVWNGGLD-ISISDSGC 65 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++++RH TSKI DD NI T+GFRGEAL SI +VS + L SR G Sbjct: 66 GMSKEDLLLSIERHATSKIFTKDDLFNIRTYGFRGEALSSIASVSKMILSSRTEDMQNGT 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G K+++++ + N GT +E++DLF+ PAR FL+ E E I D+ + A+A Sbjct: 126 QMNVLGGKVTNLKDIQRNIGTQIEIKDLFYNTPARKKFLRKENTEYLNIKDIFLKEALAN 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + K ++ I ++ G++++ N + + GY G Sbjct: 186 PNVKFILNIEGKESIK----TSGNGIENAILEIFGKNYLKNFSKFSL--------GYLGN 233 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N + +VFINGR+V+ K + + AY + G+YP ++ LE++P ++DVNV Sbjct: 234 ANLFKVNRDSIFVFINGRSVKSKIVEEAVIAAYHTKLMKGKYPTALIFLEVEPSEIDVNV 293 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK------------MISSFHQ 347 HP+K ++F N I + + I+ S + + I+ F Sbjct: 294 HPSKKVVKFANQNAIFDLVKGEIENFFTDDEDFISPYIEAENEVEENTKNNFLDINDFKD 353 Query: 348 DNAPKTHLPKYATSLTN---------TQEKLFLQ-----ENRLSTNDLLPSDDPTYSEDN 393 D + L + +EK F EN +++N++ + DN Sbjct: 354 DVQDFSQLSVVKKEDYSKKDYKDIEIEKEKTFGNAGTTTENAINSNEIKEDSKNIENFDN 413 Query: 394 --------------------DPVEESEATHYQLGIACAQIHQNY---------------- 417 + E ++ Q ++ +I ++ Sbjct: 414 SVKNLIPVNKNKVEINDGIIEKSENNKYIFNQEDVSRGKIFDDFSSLKNIDFKVIGQVFD 473 Query: 418 --IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 I+ + L I DQH HER+++EK++Q++ + ++ Q+LL P +L E L +E Sbjct: 474 TFILVERNGLLEIYDQHIIHERILYEKLKQEYYNHSMSKQSLLVPIRFELDPREKQLALE 533 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 + E G + F N I +R IP + + + + R+I++ I + D EN Sbjct: 534 NIEIFSSFGFDIDDFDKNEILLRSIPTMNLRDSYENIFREILNNISKNKDI----DIREN 589 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 I+ +M+C G+I++ K+ EM ++ ++ + C HGRP +K+ L D+EKLF R Sbjct: 590 IIVSMSCKGAIKANHKLTIEEMYSMVAKLHEVGE-YTCPHGRPIIVKMSLLDLEKLFKR 647 >gi|307565737|ref|ZP_07628206.1| DNA mismatch repair protein MutL [Prevotella amnii CRIS 21A-A] gi|307345563|gb|EFN90931.1| DNA mismatch repair protein MutL [Prevotella amnii CRIS 21A-A] Length = 645 Score = 435 bits (1119), Expect = e-119, Method: Composition-based stats. Identities = 168/647 (25%), Positives = 296/647 (45%), Gaps = 63/647 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ IKEL+ENS+DA+++ + ++ G++ Q+ DNG G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELVENSVDAKATIINVLVIDSGRTSIQVIDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI DD +HT GFRGEAL SI AVS + L +R G Sbjct: 65 MSDTDARLSFERHATSKIRKADDLFALHTMGFRGEALASIAAVSQVELKTRIEGQELGCH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++ISG K + P G+ + +LFF +PAR FLKS E N I +R+A+ YP Sbjct: 125 LSISGGKFIAQEPCQCTIGSNFLIENLFFNVPARRKFLKSNTTELNNIITAFQRIALVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++FT + S Y + G+F +R+ ++ G+ + + ++ ++ + G+ G P Sbjct: 185 DINFTLHSNGSEVYNLR----RGSFKQRVIEIFGKRLNQSLLPIDIETTLCNIHGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + Y+F+N R ++ + I +AY IP G + ++ P +DVN+H Sbjct: 241 ESAKKKGVHQYLFVNERYMKHPYFHKAIMSAYERLIPQGEMVPYFIYFDVPPENIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS---KKMISSFHQDNAPKTHLPK 357 P K+ I+F N I ++ +++ I K +S + I F +N Sbjct: 301 PTKTEIKFENEQAIWQILMAAVRDTIGKFYDVSSIDFDTEGRPDIPVFSPNNETAAPETN 360 Query: 358 YATSLTNTQEKLFLQEN---------------------------RLSTNDLLPSDDPTYS 390 + + E F + + L + + Sbjct: 361 FNPNFNPFLENSFSDKENHITTTNNNTDNPKYNINSNVSNHIKVNTDNWEELYAGSLQNN 420 Query: 391 EDNDPVEESEATHYQLGIA------------------------CAQIHQNYIISQTTDGL 426 + ++++ Q YII+ GL Sbjct: 421 TTTNNIQQTSLLDLDFDENGEEILIQSKLSKDIATAIEEKSPSHYQYKGRYIITAIKSGL 480 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 + +DQH AH R+++E + F K SQ +L PE+I L + E +++ + ++H +G + Sbjct: 481 MFIDQHRAHIRILYENYLKQFTEHKGHSQKVLFPEVIHLTKTEHSILEKILPEMHDIGFQ 540 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM-ACYGS 545 + G ++ AI +P L N L+++II + S ++++ I +AT A + Sbjct: 541 IDNIGGDSFAINGVPIGLEGLNTINLVQEII--VTASEKNISIKEEINISIATKLAYNAA 598 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 I G+ + + EM L+ ++ + +G+ LK DI+ LF Sbjct: 599 IPVGQVLGNKEMESLVNDLFACDTVNYTPNGKTIIAILKQQDIDHLF 645 >gi|218262303|ref|ZP_03476817.1| hypothetical protein PRABACTJOHN_02491 [Parabacteroides johnsonii DSM 18315] gi|218223454|gb|EEC96104.1| hypothetical protein PRABACTJOHN_02491 [Parabacteroides johnsonii DSM 18315] Length = 621 Score = 435 bits (1118), Expect = e-119, Method: Composition-based stats. Identities = 175/631 (27%), Positives = 290/631 (45%), Gaps = 54/631 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RP+ +KEL+EN++DA + ++ I G++ Q+ D+G G Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASVVKELVENAVDAGAGHIQVNIKDAGRTLVQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKIS DD ++HT GFRGEAL SI AVS + L +R G Sbjct: 65 MSETDARMAFERHATSKISTADDLFSLHTMGFRGEALASIVAVSQVELRTRLKGAELGTH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + SG ++ SV P A G+I V++LFF +PAR FLKS + E I + R+A+ Sbjct: 125 LVFSGSELESVEPDACTEGSIFSVKNLFFNVPARRKFLKSNETEFRNIINEFERIALVNS 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+ + + + + +RI V G+ + ++ +S+ +T+ G+ G P Sbjct: 185 QVALSLYHNDTEIFNLP----ESGLRQRIVNVYGKTLNQKLLSVDAQSSLVTISGFVGRP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + Y F+NGR ++ + + AY + IP G P + +DP +DVN+H Sbjct: 241 DSAKKRGALQYFFVNGRFMKHPYFHKAVMQAYEQLIPAGEQPNYFIYFTLDPATIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ I+F N I ++ + ++A+ K + + N K +P A Sbjct: 301 PTKTEIKFENEQPIWQILMAATREALAKSSAIPTIDFDVEDAIDIPVYNPVKEAIPYKAP 360 Query: 361 -----SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT------------- 402 S N E ++ + L + + E E+ Sbjct: 361 RVQVDSGYNPFETSSYKKPEFDWSKLYNDFEEDRTAIRQDSELIESFLVPDISEPAIEAD 420 Query: 403 -----------HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 + C Q YII+ GL ++DQH AH R++F++ + + Sbjct: 421 EVVVQDTSGSLFNDVSNPCYQYKGKYIITSLKSGLALIDQHRAHVRILFDQYIANIRQQR 480 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 SQ +L PEI++ GE A++ ED+ +G G N+ AI +PA + + Sbjct: 481 GASQQVLFPEIVEFTAGEAAVLPALLEDMRFIGFDLTNLGNNSYAINGLPAGVENLDPVS 540 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMAC---------YGSIRSGRKMQSIEMNRLLR 562 L+R+++D I++ + E I C +IR G+ + EM+ LL Sbjct: 541 LIRNMVDRAIETG-----CEVHEEI-----CDSLALSLAKAAAIRPGKILSGEEMDDLLA 590 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + S+ G+ KL +++K F Sbjct: 591 SLFSCQESNLTPDGKTIVSKLTDEELDKRFR 621 >gi|221635854|ref|YP_002523730.1| DNA mismatch repair protein MutL [Thermomicrobium roseum DSM 5159] gi|221157732|gb|ACM06850.1| DNA mismatch repair protein MutL [Thermomicrobium roseum DSM 5159] Length = 576 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 164/603 (27%), Positives = 278/603 (46%), Gaps = 50/603 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L + +IAAGE+IERP+ +KEL+EN+LDA +SR+ + GGG +++D+G Sbjct: 10 PIRVLPPNVAARIAAGEVIERPASVVKELVENALDAGASRIRISVRGGGLHEIRVSDDGC 69 Query: 62 GMTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++E+P+A+QRH TSK++ DD I T GFRGEALPSI AV+ LT+ S G Q Sbjct: 70 GIPADELPLALQRHATSKLAEDDLERIETLGFRGEALPSIAAVAELTIASATSDAPVGRQ 129 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G +I + P+A PGT V VR LF +PARL +++ + E I V++R+AIA P Sbjct: 130 LTVRGGRILADEPIAHPPGTTVTVRHLFEDLPARLAHVRNTRAEMAEIARVVQRLAIAAP 189 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE-KSNEITLQGYTGI 239 V + + +G+ +S++ G ++ + K + + G+ Sbjct: 190 HVRIALRIEDRVVLQ---TTGSGDRRVVLSELYGPTLASSLLPFGPLKIGDCSCSGFVSS 246 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + +V +NGR Q + +L+ + AY +P GR+PV+VL++ DP VDVN+ Sbjct: 247 PDLTRSSRRHLHVVVNGRWAQSRTVLALLEAAYQPLLPRGRHPVLVLVITADPAAVDVNI 306 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +R R + I + ++ + + + + + I A Sbjct: 307 HPAKLEVRLRAERELGQAIAEEVRSLLARTPRRFTFLEATPAIDPVRAAIAETPRPYDRP 366 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + F Q+ + ++ Sbjct: 367 ETEEPILTPAFPP----------------------------------LRLIGQVRERLLL 392 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + L++VDQH AHER+++E++ S + L P +ID+ ++ Sbjct: 393 LEGPAMLLLVDQHRAHERVLYERLAAAHPSAD-DTVPLPEPLVIDVRPAYRDRFARWLDE 451 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII----------DSSTTYTL 529 L G +AE FGP + +R +PA+ P L+D+ +S + Sbjct: 452 LAAYGFQAEPFGPRSFLVRTVPALPGVVAGPPELQDLGQPAALAPALLALLEESEDAWDD 511 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 + +L +AC ++R GR + M L++ + C HG P ++++ + Sbjct: 512 TSWRDRLLIQLACRLAVRRGRPLARPAMRALVQAWGATKTPAICPHGSPIVLRVEDETLA 571 Query: 590 KLF 592 F Sbjct: 572 HQF 574 >gi|255522444|ref|ZP_05389681.1| DNA mismatch repair protein [Listeria monocytogenes FSL J1-175] Length = 555 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 175/558 (31%), Positives = 268/558 (48%), Gaps = 15/558 (2%) Query: 47 AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVS 104 G + I DNG G+ E++ A RH TSKI + D +HT GFRGEALPSI +VS Sbjct: 1 EEAGLNKITIIDNGSGIEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVS 60 Query: 105 HLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVE 164 HL + + G I++ G KI + GT +EV LFF PARL +LKS E Sbjct: 61 HLEMETST-GEAKGTTISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTE 119 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL 224 ITD++ R+A+A+P +SF FS + + NG+ + I+ + G +V + Sbjct: 120 LGNITDILNRLALAHPDISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGVSIAKKSVPV 176 Query: 225 NEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 +S + + GY +P NR N N INGR +++ ++ I+ Y +P+GR+P++ Sbjct: 177 KAESLDFKISGYAVLPEVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPII 236 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 VL +E+DP VDVNVHPAK +R + I Q I++ +K + +SKK Sbjct: 237 VLQIEMDPIIVDVNVHPAKLEVRLSKEKELGQLISQMIKETFHKLQLIPDGEISKKQKED 296 Query: 345 FHQDNAPKTHLPKYATSLTNT-QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 + + T T K + E S D DD ES+A Sbjct: 297 QKSEQIQMSFEENKPVKETPTLFSKPTIPEYVPSDEDAPREDDFILETMPSYEPESQAEQ 356 Query: 404 YQL-------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 + Q+H YI +Q +GL I+DQHAA ER+ +E R+ Q Sbjct: 357 EEHTKERIPKMYPIGQMHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQE 416 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 LL P +++ E + E L +G+ E FG N+ IR P K ++LR+I Sbjct: 417 LLVPIVLEFPADEYVRLEEQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLREI 476 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 IDE + + + ++ E+ M+C SI++ + + +M LL + + + C HG Sbjct: 477 IDEALSAP-SISIHKLREDTAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCPHG 535 Query: 577 RPTFIKLKLSDIEKLFGR 594 RP I+ ++EK+F R Sbjct: 536 RPVIIQYSTYELEKMFKR 553 >gi|327182936|gb|AEA31383.1| DNA mismatch repair protein [Lactobacillus amylovorus GRL 1118] Length = 634 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 175/644 (27%), Positives = 297/644 (46%), Gaps = 65/644 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+ENSLDA ++R+ G + DNG Sbjct: 3 KIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKIS+ D + T GFRGEAL SI AVSH+ +++ G Sbjct: 63 GIERDQVDLAFTRHATSKISNEHDLFKVSTLGFRGEALASISAVSHVEILTAT-DGAIGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG A GT + V+DLFF PARL +L+S + E I D+I R+A+ Y Sbjct: 122 RATFSGGNKKGQEDAASQKGTKITVQDLFFNTPARLKYLRSPRTEIMKIVDIINRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSFT S + + NGN + ++ V G ++ + + + G Sbjct: 182 PQVSFTLSNTGKI---LLRTTGNGNLKQTVANVYGRHIAEKMEDIEAEDTDFKVTGLISK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N + +NGR +++ + + I Y + YP+ V+ +++DP VDVNV Sbjct: 239 PELTRSTRNFISILLNGRYIRNFQLNTAIMDGYGSKLEARHYPIAVVSIKVDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------VLSKKMISSFHQDNA 350 HP K +R + I +I + +K TS+ L ++ + +QD Sbjct: 299 HPTKQEVRLSKEKELSRLITTAISNVLVEKVEQTSAFANLENKRETLVDQLQFNLNQDVV 358 Query: 351 P-----------KTHLPKYATS---------------------------LTNTQEKLFLQ 372 + P++ +T T ++ + Sbjct: 359 NTERKEVPEIHDQVEKPRFKADKETEKEDTEETGKYVDLNIPRENDKYIITKTWDQNVEE 418 Query: 373 ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 + +L+ ++ S ++ + + +G YII++ L ++DQ Sbjct: 419 QQKLTPFGASSANQEVISSGDEVLANNLPRLAYVGQT-----DTYIIAENEGDLFLIDQV 473 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AA RL FEK Q S KI Q LLTP +++L + I + E + ++GI E FG Sbjct: 474 AARRRLQFEKTYQILASKKIVQQGLLTPIVLELGNLDFIQIKDKLEQIKQIGIYLEEFGQ 533 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEI--IDSSTTYTLQDRIENILATMACYGSIRSGR 550 N+ +R P + + NI + +R I+D +D + L R+ + A ++ Sbjct: 534 NSFIVRSYPTWIHE-NIEETIRQILDSYLNLDKGQSEKLFKRVAEMEA----KHAVTGKI 588 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + E +++ ++ K + GR +++ ++++K+F R Sbjct: 589 DLSAAEAKQIISDLRKTADPYHDASGRLVLVRMSQNELKKMFKR 632 >gi|237741497|ref|ZP_04571978.1| DNA mismatch repair protein mutL [Fusobacterium sp. 4_1_13] gi|229429145|gb|EEO39357.1| DNA mismatch repair protein mutL [Fusobacterium sp. 4_1_13] Length = 648 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 186/659 (28%), Positives = 317/659 (48%), Gaps = 84/659 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N IAAGE++E P+ IKELIENSLDA S ++ + GG I+D+G Sbjct: 7 RIRILDESVSNAIAAGEVVENPTSMIKELIENSLDAGSKEIKLEVWNGGLD-IFISDSGC 65 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++++RH TSKI DD NI T+GFRGEAL SI +VS + L SR G Sbjct: 66 GMSKEDLLLSIERHATSKIFTKDDLFNIRTYGFRGEALSSIASVSKMILSSRTEDMQNGT 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G K+++++ + N GT +E++DLF+ PAR FL+ E E I D+ + A+A Sbjct: 126 QMNVLGGKVTNLKDIQRNIGTQIEIKDLFYNTPARKKFLRKENTEYLNIKDIFLKEALAN 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + K ++ I ++ G++++ N + + GY G Sbjct: 186 PNVKFILNIEGKESIK----TSGNGIENAILEIFGKNYLKNFSKFSL--------GYLGN 233 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N + +VFINGR+V+ K + + AY + G+YP ++ LE++P ++DVNV Sbjct: 234 ANLFKANRDSIFVFINGRSVKSKIVEEAVIAAYHTKLMKGKYPTALIFLEVEPSEIDVNV 293 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------KGISTSSVLSKKMISSFHQDNAPKT 353 HP+K ++F N I + + I+ I + + + ++F N K Sbjct: 294 HPSKKVVKFANQNAIFDLVKGEIENFFTDDEDFISPYIEAENEVEENTKNNFLDINDFKD 353 Query: 354 HLPKYATSLTNTQEKLFLQ--------------------ENRLSTNDLLPSDDPTYSEDN 393 + ++ +E + EN +++N++ + DN Sbjct: 354 DVQDFSQLSVVKKEDYSKKDYKDIEIEKEKTFCNAGTTTENTINSNEIKEDSKNIENFDN 413 Query: 394 --------------------DPVEESEATHYQLGIACAQIHQNYIISQTTDG-------- 425 + E ++ Q ++ +I ++ + D Sbjct: 414 SVKNLISVNKNKVEINDGIIEKSENNKYIFNQEDVSRGKIFDDFSSLKNIDFKVIGQVFD 473 Query: 426 ----------LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 L I DQH HER+++EK++Q++ + ++ Q+LL P +L E L +E Sbjct: 474 TFILVERNGLLEIYDQHIIHERILYEKLKQEYYNHSMSKQSLLVPIRFELDPREKQLALE 533 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 + E G + F N I +R IP + + + + R+I+D I + D EN Sbjct: 534 NTEIFSSFGFDIDDFDKNEILLRSIPTMNLRDSYENIFREILDNISKNKDI----DIREN 589 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 I+ +M+C G+I++ K+ EM ++ ++ + C HGRP +K+ L D+EKLF R Sbjct: 590 IIVSMSCKGAIKANHKLTIEEMYSMVAKLHEVGE-YTCPHGRPIIVKISLFDLEKLFKR 647 >gi|256820971|ref|YP_003142250.1| DNA mismatch repair protein MutL [Capnocytophaga ochracea DSM 7271] gi|256582554|gb|ACU93689.1| DNA mismatch repair protein MutL [Capnocytophaga ochracea DSM 7271] Length = 612 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 161/617 (26%), Positives = 293/617 (47%), Gaps = 36/617 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ A+KEL+EN++DA ++ ++ +I GK+ Q+ DNG G Sbjct: 5 IKLLPDHVANQIAAGEVIQRPASAVKELMENAIDAGATEIKLLIKDAGKTLVQVIDNGVG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M++ + MA +RH TSKI ++D ++ T GFRGEAL SI A++H+ + ++ P++ G + Sbjct: 65 MSTTDARMAFERHATSKIQKAEDLFHLQTKGFRGEALASIVAIAHVEMQTKRPEDELGTE 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G KI+ P GT + +++LFF IPAR NFLKS+ VE I D R+A+A+P Sbjct: 125 IHIEGSKITRQEPCVCPTGTSIAMKNLFFNIPARRNFLKSDTVEFRHILDEFHRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI-TLQGYTGI 239 + F + + + NF +RI + G V + + + + G+ Sbjct: 185 AIHFFLYNNGNELFNLPAT----NFRQRIVHLFGSKTNEKLVPIIAEDTPLVQISGFIVK 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + N ++ +N R V+++++ I +AY I + + LE+DP +D+N+ Sbjct: 241 PEYLAKTKNLQFLMVNHRFVKNQYLNHAIASAYEGLIHTDQKAEYFISLEVDPTTIDINI 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ I+F I + +++ ++ + IS SK +F K P++ Sbjct: 301 HPTKTEIKFEEEHSIYALLKSAVKHSLGQFNISPILDFSKD--PTFDIPYNYKDKTPEFP 358 Query: 360 TSLTNTQEKLFLQE------------NRLSTNDLLPSDDPTYSEDNDPVEESEA------ 401 + F +E N S + P+ + Y+ + S Sbjct: 359 KIEVDPNFNPFKEEYVSRSSGSDSHSNFGSYSKKAPTWESLYTGIESSINTSNPETIVSS 418 Query: 402 -----THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 G + + Y+I+ GL+I++ + AH+R++FE + ST SQ Sbjct: 419 LFETEPTRSQGKKIIALAKKYLITTLEGGLIIININRAHQRILFEDFMKHLQSTHSASQQ 478 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 L+ P + E ++ + E G + I + IP L+ IP + ++ Sbjct: 479 LMFPYELPFAPHELEVVAQLRELFECSGFMFT-IETDKIVVSGIPLHLTDSEIPNIFNEL 537 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYG-SIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 + + I+ + ++ + A C ++++G+ + E L+ + Sbjct: 538 LQQHIE--ALPSTENTQKEAFAKALCKSLAVKTGQVLSEEEQETLINNLFSCQEVLISPF 595 Query: 576 GRPTFIKLKLSDIEKLF 592 G+ + L +++IE LF Sbjct: 596 GKRIYYNLSVNEIENLF 612 >gi|225012742|ref|ZP_03703177.1| DNA mismatch repair protein MutL [Flavobacteria bacterium MS024-2A] gi|225003275|gb|EEG41250.1| DNA mismatch repair protein MutL [Flavobacteria bacterium MS024-2A] Length = 593 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 154/596 (25%), Positives = 277/596 (46%), Gaps = 14/596 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + + NQIAAGE+I+RP+ +KEL+EN++DA S ++ ++ GK+ Q+ DNG Sbjct: 4 RISLLPDHVANQIAAGEVIQRPASVVKELLENAVDAGSDTIQLIVKDAGKTLVQVIDNGT 63 Query: 62 GMTSEEIPMAVQRHCTSK--ISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM S +I +A +RH TSK I++D + T GFRGEAL SI A++H+ +R + Sbjct: 64 GMNSTDIRLAFERHATSKINIAEDLFTLKTKGFRGEALASIAAIAHVETHTRVENEDVSH 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G ++ GT + V+ LF+ IPAR NFLKS+ VE + D R+A+A+ Sbjct: 124 CLKIEGSQVIEQTLSTQPKGTSIAVKSLFYNIPARRNFLKSDTVELRHVIDEFHRVALAH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ F F S + + N +R+ + G + V + E ++ L G+ Sbjct: 184 PEIKFLFFNNGSELFDLPS----SNLRKRLVAIFGNKLDSLLVPIEETTSLARLNGFVVK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ + Q + F+N R ++ F+ + A+ + G P L LE+DP+ +D+N+ Sbjct: 240 PSHAKKTRGQQFFFVNNRFIRSPFLNHAVSAAFEGLLRPGFNPGYFLFLELDPKTIDINI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ ++F + + + +I+ ++ + + + + A K +P Sbjct: 300 HPTKTEVKFEDEQSLYAILRSTIKHSLGIFQVIPTLDFEQNQ--TMEVPYAFKNKVPTSP 357 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH----YQLGIACAQIHQ 415 ++ F + + + P EE +TH Q+ Sbjct: 358 PIEVDSSFNPFKDSASNRKPKMEQWEGLYSGIQSLPTEEVSSTHSLVEVPQATRVFQLFS 417 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 YI+ ++++DQ AH+R+++E+ + K SQ LL P I+L + Sbjct: 418 KYIVCPLRTSMLLIDQSRAHQRILYERFLSAITTKKGISQQLLFPLTIELNPQQEEQFKR 477 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 E L LG + + +I + P I ++ ++ E D + + Sbjct: 478 SYEILEALGFEIKHI-EKSIEVMGAPEHCPPSKIESVIETLLLE-NDKESENQHFSYADQ 535 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 + +MA +IR G ++ E +RLL + ++ + FI L+ +IE+ Sbjct: 536 VAKSMAQSLAIRPGETLKLEEQHRLLDDFFGCKETTVSPFNKQIFITLEKGEIEQK 591 >gi|315224170|ref|ZP_07866010.1| DNA mismatch repair protein MutL [Capnocytophaga ochracea F0287] gi|314945903|gb|EFS97912.1| DNA mismatch repair protein MutL [Capnocytophaga ochracea F0287] Length = 612 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 161/617 (26%), Positives = 293/617 (47%), Gaps = 36/617 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ A+KEL+EN++DA ++ ++ +I GK+ Q+ DNG G Sbjct: 5 IKLLPDHVANQIAAGEVIQRPASAVKELMENAIDAGATEIKLLIKDAGKTLVQVIDNGVG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M++ + MA +RH TSKI + D ++ T GFRGEAL SI A++H+ + ++ P++ G + Sbjct: 65 MSTTDARMAFERHATSKIQKAQDLFHLQTKGFRGEALASIVAIAHVEMQTKRPEDELGTE 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G KI+ P GT + +++LFF IPAR NFLKS+ VE I D R+A+A+P Sbjct: 125 IHIEGSKITRQEPCVCPTGTSIAMKNLFFNIPARRNFLKSDTVEFRHILDEFHRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI-TLQGYTGI 239 + F + + + NF +RI + G V + + + + G+ Sbjct: 185 AIHFFLYNNGNELFNLPAT----NFRQRIVHLFGSKTNEKLVPIIAEDTPLVQISGFIVK 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + N ++ +N R V+++++ I +AY I + + LE+DP +D+N+ Sbjct: 241 PEYLAKTKNLQFLMVNHRFVKNQYLNHAIASAYEGLIHTDQKAEYFISLEVDPTTIDINI 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ I+F I + +++ ++ + IS + SK +F K P++ Sbjct: 301 HPTKTEIKFEEEHSIYALLKSAVKHSLGQFNISPTLDFSKD--PTFDIPYNYKDKTPEFP 358 Query: 360 TSLTNTQEKLFLQE------------NRLSTNDLLPSDDPTYSEDNDPVEESEA------ 401 + F +E N S + P+ + Y+ + S Sbjct: 359 KIEVDPNFNPFKEEYVSRSSGSDSHSNFGSYSKKAPTWESLYTGIESSINTSTPETIVSS 418 Query: 402 -----THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 G + + Y+I+ GL+I++ + AH+R+++E + ST SQ Sbjct: 419 LFETEPTRSQGKKIIALAKKYLITTLEGGLIIININRAHQRILYEDFMKHLQSTHSASQQ 478 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 L+ P + E +I + E G + I + IP L+ IP + ++ Sbjct: 479 LMFPYELPFAPHELEVIAQLRELFECSGFMFT-IETDKIVVSGIPLHLTDSEIPNIFNEL 537 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYG-SIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 + + I+ + ++ + A C ++++G+ + E L+ + Sbjct: 538 LQQHIE--ALPSTENTQKEAFAKALCKSLAVKTGQVLSEEEQETLINNLFSCQEVLISPF 595 Query: 576 GRPTFIKLKLSDIEKLF 592 G+ + L +++IE LF Sbjct: 596 GKRIYYNLSVNEIENLF 612 >gi|99034447|ref|ZP_01314447.1| hypothetical protein Wendoof_01000751 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 572 Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats. Identities = 209/578 (36%), Positives = 321/578 (55%), Gaps = 27/578 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L K IN+IAAGE+IERP+ +KEL+EN++DA S +E I GG++ +TD+G Sbjct: 1 MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSLEIEIKIERGGRNLIIVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ +A RH TSK+SD + I GFRGEALPSI AVS + L S+ + N Sbjct: 61 NGVEKNDLELAFMRHATSKLSDNELIEIKHLGFRGEALPSIAAVSRIKLSSKAREANEAW 120 Query: 120 QIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I+ GEKI P +++ GT +EVRDLFF P RL FLK+E+ ET I D++ +A+ Sbjct: 121 SISYEGGEKIGEQTPYSLSQGTHIEVRDLFFATPNRLKFLKTERAETQSIVDIVNNLAMI 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + FT ++ K+ + + R+ +V E+F N++E+NE+ + I L G+ Sbjct: 181 NYHIGFTLTSGNK---KLLKYAKQTSLFHRLCEV-EEEFQGNSLEINEEEDGIKLTGHIC 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 PT NRG + Q Y F+NGR ++D ++ +R AY + IP RYP L LEI QVDVN Sbjct: 237 KPTVNRGKSTQIYTFVNGRPIKDNLLIGAVRYAYHDFIPSDRYPFAALHLEIPYDQVDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK---KMISSFHQDNAPKTHL 355 VHP KS +RF+N +I + + + KA++++ + + K + F + N K Sbjct: 297 VHPNKSEVRFQNKKLIYEIMTRGLIKALSRRIGTFPAHDQKMDSTLPDPFDKPNVQKEFY 356 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT------------- 402 K + N K F N + S Y+ ++E Sbjct: 357 EKRPSPFKNQLIKEFASLNEKAKGLSEQSKSFDYTGIQKFPSQAETMVLEKKVLEQVDLI 416 Query: 403 -HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 + LG A Q++ YII++ D L+IVDQHAAHERL++E ++ + + Q LL PE Sbjct: 417 ESHPLGFARCQVYNTYIIAEVRDKLIIVDQHAAHERLVYECLK---QKSSVKRQKLLLPE 473 Query: 462 IIDL-LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 +++ + +I + + L +G E N + ++EIPAIL ++ ++L +I+D + Sbjct: 474 TVEIKNQAGMEMIEIYKDKLFEMGFDIEIKPENKVIVKEIPAILGAIDVKEMLINIVDRL 533 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 + T ++D++ ILAT+ACYGSIR+GRKM+ EMN Sbjct: 534 TEIEDTLPVEDKVNKILATIACYGSIRAGRKMRLEEMN 571 >gi|187250632|ref|YP_001875114.1| DNA mismatch repair protein MutL [Elusimicrobium minutum Pei191] gi|238058934|sp|B2KB18|MUTL_ELUMP RecName: Full=DNA mismatch repair protein mutL gi|186970792|gb|ACC97777.1| DNA mismatch repair protein MutL [Elusimicrobium minutum Pei191] Length = 608 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 162/612 (26%), Positives = 299/612 (48%), Gaps = 25/612 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L E + +IAAGE+IERP+ +KEL+EN++DA + + I G GK ++ DNG Sbjct: 3 KIKILEESVAARIAAGEVIERPAGVLKELLENAVDAGADTINIDIDGAGKKLIRVNDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++V RH TSKI +D ++ TFGFRGEAL S+ AVS L++ S + +G Sbjct: 63 GMSKEDLTLSVVRHSTSKIKNFEDLDSLDTFGFRGEALYSVAAVSKLSISS-AEEGGSGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G K+ SV P GT VEV+DLF+ PARL FLKS+ E +L+ V+ A+A Sbjct: 122 KIIVEGGKLISVSPSPNIKGTTVEVKDLFYNTPARLKFLKSDNYERSLLLKVVEESALAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTN--GNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 VS+ T Y + + +R Q++G + + + + ++ + + Sbjct: 182 LHVSYNVRTDGRLVYSFLASNGDFKKTVIQRAGQILGAEIAVSLISVEDE--RFGFKAFL 239 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 + + + FIN R + K + + AY P R+P ++ + + DV Sbjct: 240 TPLSKLTAVRDLQFFFINKRPLTSKTLQQAVYKAYHGR-PKDRHPAFIVFMNMPAADFDV 298 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAIN------KKGISTSSVLSKKMISSFHQDNAP 351 N+HP K ++F + F++ Q+A+ I+ +S + M SF + A Sbjct: 299 NIHPQKRDVKFAQENAVFGFLMNVTQRALTGAAQPVDINITPASPPAATMEFSFAKPRAE 358 Query: 352 KTHLPKYATSLTN-------TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 + + ++ +++ + +++ + +P ++ + Sbjct: 359 EPSYKPFGQNIVEENVFAPISKQAVVVKDFEDPVSYNPEPAEPKKEMGAHVQTDNPSWWQ 418 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 +H++Y+I +T GL++VDQHAA ER+++E+ + ++ Q L+ P +D Sbjct: 419 GPYRFLGSLHKSYLIYETELGLMLVDQHAARERVLYEEYLKKMEENELGIQPLMFPVTVD 478 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS--KKNIPQLLRDIIDEIID 522 L +M + L G + E+F P + + +P I + ++ + + + + D Sbjct: 479 LPASNVENLMLWKDWLKTAGFEIEQFSPRTVLVNAVPNIFRFKEDSLKEFIVSLAGIVGD 538 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 + + + +A +AC SI++ + E + LL ++++ + C HGRP + Sbjct: 539 PLKSSD--ELKKKTVAMLACKKSIKAKEDVSMAEADALLLDLKRCQDGMHCPHGRPVMVS 596 Query: 583 LKLSDIEKLFGR 594 L +++ K FGR Sbjct: 597 LSAAELTKKFGR 608 >gi|295692268|ref|YP_003600878.1| DNA mismatch repair protein mutl [Lactobacillus crispatus ST1] gi|295030374|emb|CBL49853.1| DNA mismatch repair protein mutL [Lactobacillus crispatus ST1] Length = 641 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 173/646 (26%), Positives = 284/646 (43%), Gaps = 64/646 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+ENSLDA ++R+ G + DNG Sbjct: 3 KIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKI++ D + T GFRGEAL SI AVSH+ +++ G Sbjct: 63 GIARDQVDLAFTRHATSKIANEHDLFKVSTLGFRGEALASISAVSHVEILTATENA-IGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG A GT + V+DLFF PARL +L+S + E I D+I R+A+ Y Sbjct: 122 RANYSGGNKKGQEDAAARKGTKITVKDLFFNTPARLKYLRSPRTEIMKIVDIINRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT S + N N + ++ V G + K ++ + G Sbjct: 182 PHVSFTLSNTGKI---LLRTPGNNNLKQTVANVYGRHIAEKMEKFEAKDSDFKITGLMSK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N + +NGR +++ + + I Y + YP++VL +++DP VDVNV Sbjct: 239 PELTRSTRNFISILLNGRYIKNFQLNTAILDGYGSKLAARHYPIIVLAIKVDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS--------------------- 338 HP K +R + I +I + +K S+ + Sbjct: 299 HPTKQEVRLSKEKELGRLITSAISNTLVEKVEQISAFANLENKRDTLVDQLSFNLNQDVV 358 Query: 339 ---KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDD--------- 386 +K + PK + S N Q + Q++ DL + Sbjct: 359 NTARKKEPEIREQEKPKFLTIESDDSEDNIQNEAVKQDSEKKYVDLNQPREDDQYIVTKT 418 Query: 387 --------------PTYSEDNDPVEESEATHYQLGIACAQIHQN--YIISQTTDGLVIVD 430 PT + + + + T + Q Y+ +Q L ++D Sbjct: 419 WKQNVALQQALTPFPTTRTNQEVISSGDETLANNLPRLVYVGQTDTYLFAQHNGDLFLID 478 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 Q AA RL FE++ + K+ Q LLTP I++ + I + E + ++GI E F Sbjct: 479 QVAARRRLKFEQIFHMITAKKVVQQGLLTPIILEFGNLDFMQIKDQVEQIKQVGIYLEDF 538 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY---GSIR 547 G N+ +R P + N+ +R I+D ++ ++ I A A G I+ Sbjct: 539 GQNSFIVRSYPTWIHD-NVEDSIRKILDGYLNVDKGKA-KNLFSRIAAMQAKREITGKIK 596 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + + E ++L ++ K + GR +++ +++ K+F Sbjct: 597 ----LSAAEAEQILLDLRKCTDPYHDADGRIILVRMSQNELRKMFK 638 >gi|296122089|ref|YP_003629867.1| DNA mismatch repair protein MutL [Planctomyces limnophilus DSM 3776] gi|296014429|gb|ADG67668.1| DNA mismatch repair protein MutL [Planctomyces limnophilus DSM 3776] Length = 692 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 174/690 (25%), Positives = 297/690 (43%), Gaps = 100/690 (14%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++LS ++N+IAAGE+IERP+ +KELIENS+D+ + RVE I GG + ++TD+G Sbjct: 3 RIQQLSNSVVNKIAAGEVIERPASVVKELIENSIDSGALRVEVDIGAGGSEYIRVTDDGG 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++I +AV H TSKI DD I T GFRGEAL SI VS L + SR P ++ G+ Sbjct: 63 GIHADDILLAVTTHATSKIRTADDLFQISTLGFRGEALASIAEVSQLRIRSRIPDSDVGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ++ + V P GT +E+R LF P R FLKS+ E I++ R+A+A Sbjct: 123 ELVVNLGERGEVVPCGCATGTCIEIRQLFANTPVRRKFLKSDATEFGHISEQFTRIALAR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V Y++ +R+ G + ++ + E+ L GY G Sbjct: 183 SHVHMVLRHNDKIVYELPA---TDRLIDRLEMFYGSAISEQLISIDHQLGEMRLWGYVGH 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P N+ ++F+NGR QD+ I + AY I + R+P+ L LE++P VDVNV Sbjct: 240 PAVNKATRKWQHLFLNGRWFQDRSIQHALSEAYRGLIMVQRHPICFLFLELNPADVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-------SSVLSKKMISSFHQDNAPK 352 HP K +RF++P I ++ S++ + + +S + + + ++ + Sbjct: 300 HPTKVEVRFQDPQSIYRLMLSSLRNRFLGMDLDSKLKVPAEASTVDPQEQNEIQKEFSQW 359 Query: 353 THLPKYATS--------------LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 + T+ N L L L + P N E Sbjct: 360 AKTELFKTAEIAGSPLMVGSTIGSANANSPLSLLSPNLPDSATSPWSSEIAPGLNRFETE 419 Query: 399 SEATHYQLGIACAQIH--QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS------- 449 + ++++ ++ ++ +D E E+ ++ + Sbjct: 420 NLEWSATTHRTVSRVNSPSHFDHVAHSESTDGMDTPEVEEAAFAEQPQKSDHELDSSQAR 479 Query: 450 ---------------------TKITSQTLLTPEIIDLLEGECALIMEHD-------EDLH 481 + + + ++ +I +H E+ Sbjct: 480 EISELPHAAGSQNHHFSTQFLEGVRALQIHDCYLVVETPEGMTVIDQHALHERILYEEFR 539 Query: 482 R-------------------LGI------------------KAERFGPNAIAIREIPAIL 504 R LG + FG I + PA+L Sbjct: 540 RRVHSKAMESQRLLIPVPIALGFRGSSLLLDCREALDQLGFEICEFGQGTILLSAYPAML 599 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 K N QLLRD+ +++ SS +D ++ +L MAC +++SG+K+ E+ LLR+ Sbjct: 600 GKLNQEQLLRDLAEQLESSSLESAHRDILDELLNMMACKAAVKSGQKLSQEEIEELLRQR 659 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ C HGRPT + L S++++ FGR Sbjct: 660 HLVADAHHCPHGRPTALNLSRSELDRQFGR 689 >gi|227877608|ref|ZP_03995662.1| DNA mismatch repair protein MutL [Lactobacillus crispatus JV-V01] gi|256844549|ref|ZP_05550035.1| DNA mismatch repair protein MutL [Lactobacillus crispatus 125-2-CHN] gi|256849062|ref|ZP_05554495.1| DNA mismatch repair protein mutL [Lactobacillus crispatus MV-1A-US] gi|262047544|ref|ZP_06020499.1| DNA mismatch repair protein MutL [Lactobacillus crispatus MV-3A-US] gi|312977891|ref|ZP_07789637.1| DNA mismatch repair protein HexB [Lactobacillus crispatus CTV-05] gi|227862802|gb|EEJ70267.1| DNA mismatch repair protein MutL [Lactobacillus crispatus JV-V01] gi|256613627|gb|EEU18830.1| DNA mismatch repair protein MutL [Lactobacillus crispatus 125-2-CHN] gi|256713838|gb|EEU28826.1| DNA mismatch repair protein mutL [Lactobacillus crispatus MV-1A-US] gi|260572120|gb|EEX28685.1| DNA mismatch repair protein MutL [Lactobacillus crispatus MV-3A-US] gi|310895198|gb|EFQ44266.1| DNA mismatch repair protein HexB [Lactobacillus crispatus CTV-05] Length = 641 Score = 432 bits (1110), Expect = e-118, Method: Composition-based stats. Identities = 173/646 (26%), Positives = 284/646 (43%), Gaps = 64/646 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+ENSLDA ++R+ G + DNG Sbjct: 3 KIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKI++ D + T GFRGEAL SI AVSH+ +++ G Sbjct: 63 GIARDQVDLAFTRHATSKIANEHDLFKVSTLGFRGEALASISAVSHVEILTATENA-IGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG A GT + V+DLFF PARL +L+S + E I D+I R+A+ Y Sbjct: 122 RANYSGGNKKGQEDAAARKGTKITVKDLFFNTPARLKYLRSSRTEIMKIVDIINRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT S + N N + ++ V G + K ++ + G Sbjct: 182 PHVSFTLSNTGKI---LLRTPGNNNLKQTVANVYGRHIAEKMEKFEAKDSDFKITGLMSK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N + +NGR +++ + + I Y + YP++VL +++DP VDVNV Sbjct: 239 PELTRSTRNFISILLNGRYIKNFQLNTAILDGYGSKLAARHYPIIVLAIKVDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS--------------------- 338 HP K +R + I +I + +K S+ + Sbjct: 299 HPTKQEVRLSKEKELGRLITSAISNTLVEKVGQISAFANLENKRDTLVDQLSFNLNQDVV 358 Query: 339 ---KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDD--------- 386 +K + PK + S N Q + Q++ DL + Sbjct: 359 NTARKKEPEIREQEKPKFLTIESDDSEDNIQNEAVKQDSEKKYVDLNQPREDDQYIVTKT 418 Query: 387 --------------PTYSEDNDPVEESEATHYQLGIACAQIHQN--YIISQTTDGLVIVD 430 PT + + + + T + Q Y+ +Q L ++D Sbjct: 419 WKQNVALQQALTPFPTTRTNQEVISSGDETLANNLPRLVYVGQTDTYLFAQHNGDLFLID 478 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 Q AA RL FE++ + K+ Q LLTP I++ + I + E + ++GI E F Sbjct: 479 QVAARRRLKFEQIFHMITAKKVVQQGLLTPIILEFGNLDFMQIKDQVEQIKQVGIYLEDF 538 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY---GSIR 547 G N+ +R P + N+ +R I+D ++ ++ I A A G I+ Sbjct: 539 GQNSFIVRSYPTWIHD-NVEDSIRKILDGYLNVDKGKA-KNLFSRIAAMQAKREITGKIK 596 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + + E ++L ++ K + GR +++ +++ K+F Sbjct: 597 ----LSAAEAEQILLDLRKCTDPYHDADGRIILVRMSQNELRKMFK 638 >gi|188995419|ref|YP_001929671.1| DNA mismatch repair protein MutL [Porphyromonas gingivalis ATCC 33277] gi|238689263|sp|B2RL29|MUTL_PORG3 RecName: Full=DNA mismatch repair protein mutL gi|188595099|dbj|BAG34074.1| DNA mismatch repair protein MutL [Porphyromonas gingivalis ATCC 33277] Length = 618 Score = 431 bits (1109), Expect = e-118, Method: Composition-based stats. Identities = 160/621 (25%), Positives = 295/621 (47%), Gaps = 37/621 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + I NQIAAGE+I+RP+ +KEL+EN+LDA +S + + G+ ++TDNG G Sbjct: 5 IRLLPDSIANQIAAGEVIQRPASVVKELLENALDAGASIIRLDVREAGRELIRVTDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKI+ D ++ T GFRGEAL SI AV+ + L++R ++ G + Sbjct: 65 MSQSDARMAFERHATSKIASFQDLFSLRTMGFRGEALASIAAVAQVELLTRRAEDELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G ++ V V G I+ V++LF+ +PAR FLKS + E I R+A+ P Sbjct: 125 LTINGSEVGEVATVTSPQGCILCVKNLFYNVPARRKFLKSNETEFRHILTEYERVALVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + +RI V G+ + + + KS + G+ G P Sbjct: 185 QVAFSIYHSGELVQDLPPSP----LKKRILDVFGKRMEKDLIPIGIKSPITNISGFVGRP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY IP G P L +++P Q+DVN+H Sbjct: 241 DGARKRGALQYFFVNGRFMRHPYFHKAVMAAYEAIIPQGTMPNYFLYFDLEPSQIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ I+F + I I I++A++ + +K + P ++ + Sbjct: 301 PTKTEIKFSDEQAIFKLIGVVIREALSSSNAVPAIDFDRKELIDIPAYQGPGKNVVRPPV 360 Query: 361 SLTNTQEKL-------FLQENRLSTNDLLPSDDPTYSEDNDPVEE--------------- 398 L + ++ +R + D+ ++ E E+ Sbjct: 361 DLDPSYNPFKETGLTEPIRSSRRQSPDMGWNELFKQFEAKRDAEKMAEPPIRSEGLFAST 420 Query: 399 ----SEATHYQLGIACAQIHQ-NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 S + +H+ Y+++ + GL +VD H AH+R+++++ D + I Sbjct: 421 DFTPSAVSATPSTDMLCYVHRGRYLVTTLSRGLALVDFHRAHKRILYDRFMADESRRHIE 480 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 Q LL PE+++ + + + ++L +G G ++ ++ P + ++ Sbjct: 481 QQQLLFPELLEFNPSDASAVKAAVDELQSVGFDLSPLGVSSYSLLAAPVQIID-CAADVV 539 Query: 514 RDIIDEIIDSSTTYTLQDRIENILAT-MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 RD+I ++ + +++ ++AT +A Y +I G+ + E + LL E+ + +S+ Sbjct: 540 RDVIHTTLEDGRSSH--EQMLELIATQIAEYQAIPCGKTPTAEEASDLLAELFASNDSTY 597 Query: 573 CNHGRPTFIKLKLSDIEKLFG 593 G+ ++ +DI + F Sbjct: 598 TPDGKLIVSIIEEADIARRFE 618 >gi|227894651|ref|ZP_04012456.1| DNA mismatch repair protein [Lactobacillus ultunensis DSM 16047] gi|227863546|gb|EEJ70967.1| DNA mismatch repair protein [Lactobacillus ultunensis DSM 16047] Length = 636 Score = 431 bits (1109), Expect = e-118, Method: Composition-based stats. Identities = 179/640 (27%), Positives = 292/640 (45%), Gaps = 57/640 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+ENSLDA ++R+ G + DNG Sbjct: 3 KIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRIDFVDAGLKQIVVQDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKIS+ D + T GFRGEAL SI AVSH+ +++ G Sbjct: 63 GIARDQVDLAFTRHATSKISNEHDLFKVATLGFRGEALASISAVSHVEILTATEGA-IGV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG A GT + VRDLFF PARL +L+S + E I D+I R+A+ Y Sbjct: 122 RATFSGGNKKGQEDAAARKGTKITVRDLFFNTPARLKYLRSPRTEIMKIVDIINRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSFT S + + NGN + ++ V G + K N+ + G Sbjct: 182 PQVSFTLSNTGKI---LLRTTGNGNLKQTVANVYGRHIAEGMENFSTKDNDFKVSGLMSK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N + +NGR +++ + + I Y + YP+VV+ +++DP VDVNV Sbjct: 239 PELTRSTRNFISILLNGRYIKNFQLNTAIMDGYGSKLTARHYPIVVVSIKVDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV-----------------LSKKMI 342 HP K +R + I +I A+ +K T + L++ ++ Sbjct: 299 HPTKQEVRLSKEKELSRLITTAISNALVEKVEQTDAFANLENKRETLVDQLQLNLNQDVV 358 Query: 343 SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLS-------------------TNDLLP 383 ++ + LT E+ E + T D Sbjct: 359 NTARKKIPEVHDQADKPEFLTTKPEENKATETKSDAQYVDLNKPREDDKYIITKTWDQNV 418 Query: 384 SDDPTYSEDNDPVEESEATHY------QLGIACAQIHQ--NYIISQTTDGLVIVDQHAAH 435 S + + V + E A + Q YII++ L ++DQ AA Sbjct: 419 SRQQQLTPFSSSVADQEVISNGDETLANNLPRLAYVGQTDTYIIAENNGDLFLIDQVAAR 478 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 RL FEK Q + KI Q LLTP +++ + I + + + ++GI E FG N+ Sbjct: 479 RRLQFEKTYQMIAAKKIVQQGLLTPIVLEFGNLDFIQIKDKIDQIKQIGIHLEDFGQNSF 538 Query: 496 AIREIPAILSKKNIPQLLRDIIDEI--IDSSTTYTLQDRIENILATMACYGSIRSGRKMQ 553 +R P + + N+ + +R I+D +D + L R+ + A +I+ ++ Sbjct: 539 IVRSYPTWI-QNNVEETIRQILDGYLNLDKGKSNNLFKRVAALEA----KKAIKGKIQLS 593 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + E ++L ++ K + GR +++ +++ K+F Sbjct: 594 AAEAKQILTDLRKTTDPYHDASGRIILVRMSQNELRKMFK 633 >gi|307132706|ref|YP_003884722.1| methyl-directed mismatch repair protein [Dickeya dadantii 3937] gi|306530235|gb|ADN00166.1| methyl-directed mismatch repair protein [Dickeya dadantii 3937] Length = 646 Score = 431 bits (1109), Expect = e-118, Method: Composition-based stats. Identities = 169/633 (26%), Positives = 281/633 (44%), Gaps = 72/633 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 CGIGKADLALALARHATSKIATLDDLEAIVSLGFRGEALASISSVSRLTLTSRTDAQEEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGREMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFMHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ T + S R+ + G F+ +A+ ++ + ++ + G+ Sbjct: 181 ARFDVAITLHHNGKLIRQYRAVSDPAQRERRLGSICGAAFLQHALAVSWQHGDLNIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R Y ++N R ++D+ I IR AY + + + P VL LE+DP QVDV Sbjct: 241 ADPAGSRQLPEMQYCYVNQRMMRDRLINHAIRQAYQDQLRDEQQPAYVLYLEVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINK-------------KGISTSSVLSKKMISS 344 NVHPAK +RF ++ +FI Q++ + + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVMTVLQQAASPGLTGAGETPMATWQPENRMAAGENQ 360 Query: 345 FHQDNAPKTHLPKYATSLTNTQ--EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES--- 399 F + P P+ A+S + + E +E + + + + Sbjct: 361 FARPAEPTPETPRAASSGSAGRHVESHHSRERQPARTETAGYQKKQGELYQQFLHTESSR 420 Query: 400 -------------------------------------EATHYQLGIACAQIHQNYIISQT 422 E+ LG +Y + + Sbjct: 421 QQTVAREAPPVKDAPTTQRDTQRDMTEKTAAVGEVPLESHALGLGRVLTVYPPSYALVEY 480 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 GL ++ A L ++ S + Q LL P+ + L E A++ + L R Sbjct: 481 QQGLALLSLTVAERYLRQAQLTPLAASEGLRPQPLLIPQRLTLNPSELAVMQQQQPLLTR 540 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMAC 542 +GI+ E P A +R +P L ++N+ L+ D++ + DS + + A +A Sbjct: 541 MGIEVELAPPRA-TLRAVPLPLRQQNLQNLISDLLGYLADSHDAKP-----DAVAAWIAG 594 Query: 543 Y-GSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 GS R + + ++L ++E+ C Sbjct: 595 RLGSERENWTL--AQAVQVLSDVERL-----CP 620 >gi|261880048|ref|ZP_06006475.1| DNA mismatch repair protein MutL [Prevotella bergensis DSM 17361] gi|270333288|gb|EFA44074.1| DNA mismatch repair protein MutL [Prevotella bergensis DSM 17361] Length = 619 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 169/620 (27%), Positives = 305/620 (49%), Gaps = 34/620 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ +KEL+EN++DA++ V ++ G++ Q+ D+G G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVVKELMENAVDADARHVNVLVVDAGRTSIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI DD N+HT GFRGEAL S+ AV+H+ L +R G Q Sbjct: 65 MSETDARLSFERHATSKIRKPDDLFNLHTMGFRGEALASVAAVAHVELRTRTEHEEIGTQ 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G + S P A G+ ++ +LF+ +PAR FLKS E N I + R+ + YP Sbjct: 125 LTIAGSRFSGQEPCACPVGSNFKIENLFYNVPARRKFLKSNATELNHIINAFERIVLVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+FTF + S Y + G +RI V G+ + + +N +++ LQG+ G P Sbjct: 185 EVTFTFHSNGSEMYNLRA----GGLRQRILDVFGKRVNQDLLPVNVETSLCGLQGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +R Y F+NGR ++ + + + TA+ IP G L ++DP+ +DVN+H Sbjct: 241 ESSRKKGAHQYFFVNGRYMRHPYFHNAVMTAFERLIPQGTQVPYFLYFDVDPKDIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-----------SVLSKKMISSFHQDN 349 P K+ I+F N I ++ S++ A+ + + V + + + Q N Sbjct: 301 PTKTEIKFENEQAIWQILMASVKDALGRFNDVSVIDFDTEGKPDIPVYNSQTEAQLPQMN 360 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 + P ++T + + +Q + S + E + ++ EA ++ Sbjct: 361 LNPQYNPFHSTIESGEKLSGKMQHTQGSREFTRSEIPDQWQELYNGLQPEEAPAHETLFT 420 Query: 410 ----------------CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 Q YI++ GL+IVDQH AH R++FE+ ++ ++ K+ Sbjct: 421 ESGEGEKSLIADKSPSHYQYKGRYIMTAVKSGLMIVDQHRAHIRILFEQYQKQLSARKMH 480 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 SQ +L PE I L E + + E+ +G + G A+ +P + ++ +L+ Sbjct: 481 SQKMLFPETIQLSAREESTLSTVYEEFAAMGFELSNLGGGTYALNAVPEGIEGVDVLRLV 540 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 +++ + S T + ++ ++A +I G+ + + EM ++ + N + Sbjct: 541 HEMLLS-AEESGTPAAHEINNSLALSLARAAAIPYGQVLSNDEMENVINGLFLCSNVNYT 599 Query: 574 NHGRPTFIKLKLSDIEKLFG 593 G+ LK +IE++ Sbjct: 600 PDGKNILYILKQVEIEQMLK 619 >gi|293381578|ref|ZP_06627565.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus crispatus 214-1] gi|290921848|gb|EFD98863.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus crispatus 214-1] Length = 641 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 173/646 (26%), Positives = 284/646 (43%), Gaps = 64/646 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+ENSLDA ++R+ G + DNG Sbjct: 3 KIHELSETLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFVDAGLKQIVVQDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKI++ D + T GFRGEAL SI AVSH+ +++ G Sbjct: 63 GIARDQVDLAFTRHATSKIANEHDLFKVSTLGFRGEALASISAVSHVEILTATENA-IGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG A GT + V+DLFF PARL +L+S + E D+I R+A+ Y Sbjct: 122 RANYSGGNKKGQEDAAARKGTKITVKDLFFNTPARLKYLRSPRTEIMKTVDIINRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT S + N N + I+ V G + K ++ + G Sbjct: 182 PHVSFTLSNTGKI---LLRTPGNNNLKQTIANVYGRHIAEKMEKFEAKDSDFKITGLMSK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N + +NGR +++ + + I Y + YP++VL +++DP VDVNV Sbjct: 239 PELTRSTRNFISILLNGRYIKNFQLNTAILDGYGSKLAARHYPIIVLAIKVDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS--------------------- 338 HP K +R + I +I + +K S+ + Sbjct: 299 HPTKQEVRLSKEKELGRLITSAISNTLVEKVEQISAFANLENKRDTLVDQLSFNLNQDVV 358 Query: 339 ---KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDD--------- 386 +K + PK + S N Q + Q++ DL + Sbjct: 359 NTARKKEPEIREQEKPKFLTTESDDSEDNIQNEAVKQDSEKKYVDLNQPREDDQYIVTKT 418 Query: 387 --------------PTYSEDNDPVEESEATHYQLGIACAQIHQN--YIISQTTDGLVIVD 430 PT + + + + T + Q Y+++Q L ++D Sbjct: 419 WKQNVALQQALTPFPTTRTNQEVISSGDETLANNLPRLVYVGQTDTYLLAQHNGDLFLID 478 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 Q AA RL FE++ + K+ Q LLTP I++ + I + E + ++GI E F Sbjct: 479 QVAARRRLKFEQIFHMITAKKVVQQGLLTPIILEFGNLDFMQIKDQVEQIKQVGIYLEDF 538 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY---GSIR 547 G N+ +R P + N+ +R I+D ++ ++ I A A G I+ Sbjct: 539 GQNSFIVRSYPTWIHD-NVEDSIRKILDGYLNVDKGKA-KNLFSRIAAMQAKREITGKIK 596 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + + E ++L ++ K + GR +++ +++ K+F Sbjct: 597 ----LSAAEAEQILLDLRKCTDPYHDADGRIILVRMSQNELRKMFK 638 >gi|212550998|ref|YP_002309315.1| DNA mismatch repair protein MutL [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549236|dbj|BAG83904.1| DNA mismatch repair protein MutL [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 582 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 160/592 (27%), Positives = 286/592 (48%), Gaps = 16/592 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RP+ +KELIEN++DA + ++ +I G+S Q+ DNG G Sbjct: 4 IHLLPDSIANQIAAGEVIQRPASVVKELIENAVDAAADNIQIIIKDAGRSLIQVIDNGQG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI D + T GFRGEAL SI AV+ + L +R ++ G Sbjct: 64 MSKTDARLSFERHATSKIHSAKDLFALRTMGFRGEALASIAAVAQVELKTRRKEDEIGIF 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I IS K+ VA++ G+ V++LF+ IPAR FLKS ++E I R+A+ P Sbjct: 124 IRISASKVEKQETVAIHSGSSFSVKNLFYNIPARRKFLKSNEIEFKNILVEFERVALVNP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++FT + N +RI+ ++G N + +N ++ I + G+ +P Sbjct: 184 QITFTLRHNSREIISLPI----SNLKQRITNLMGGKIAQNLLPININTSFIQIYGFISVP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T ++ Y F NGR ++ + + A+ IP+G +P L ++IDP +D+N+H Sbjct: 240 TASKKRGALQYFFANGRYMRHAYFHRAVILAFEPFIPIGDHPNYFLYIKIDPASIDINIH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ I+F N ++ I ++++AI + + S ++ + + + Sbjct: 300 PTKTEIKFENEQMLFQIIFSAVKEAIAVPTLEFDQEKVIDIPSYRGKEIQITPPIIQMYS 359 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 +K + ++++ ++ N+ +E Y+I Sbjct: 360 DYNPFSDKYVYENSQIN-----WKQSCLKNQTNNTEGTAERIKTTYLQYKG----KYLIL 410 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 G++ +DQ AH R++F+ + N + SQ LL PE I E ++ +DL Sbjct: 411 SLKSGIIFIDQRRAHIRILFDDYIKRINHKQGISQRLLFPEKISFTPKEITILPYILDDL 470 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 +G + G N +I IPA +I L++IID+I+ +S ++ E+++ + Sbjct: 471 AFIGFDLKDLGNNIYSINGIPAGSENIDIIATLQEIIDKILTTSC-EIKEEITESLILVL 529 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 A +I G E++ L+ + + + G+ L ++ K F Sbjct: 530 AQKTAINYGNFFSEEEIHTLIARLFSSTSPKYTPDGKLIIFMLSEEELNKRF 581 >gi|34540235|ref|NP_904714.1| DNA mismatch repair protein MutL [Porphyromonas gingivalis W83] gi|81833818|sp|Q7MX15|MUTL_PORGI RecName: Full=DNA mismatch repair protein mutL gi|34396547|gb|AAQ65613.1| DNA mismatch repair protein MutL [Porphyromonas gingivalis W83] Length = 618 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 159/621 (25%), Positives = 294/621 (47%), Gaps = 37/621 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + I NQIAAGE+I+RP+ +KEL+EN+LDA +S + + G+ ++TDNG G Sbjct: 5 IRLLPDSIANQIAAGEVIQRPASVVKELLENALDAGASIIRLDVREAGRELIRVTDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKI+ D ++ T GFRGEAL SI AV+ + L++R ++ G + Sbjct: 65 MSQSDARMAFERHATSKIASFQDLFSLRTMGFRGEALASIAAVAQVELLTRRAEDELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G ++ V V G I+ V++LF+ +PAR FLKS + E I R+A+ P Sbjct: 125 LTINGSEVGEVATVTSPLGCILCVKNLFYNVPARRKFLKSNETEFRHILTEYERVALVNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ + +RI V G+ + + + KS + G+ G P Sbjct: 185 QVAFSIYHSGELVQDLPPSP----LKKRILDVFGKRMEKDLIPIGMKSPITNISGFVGRP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY IP G P L +++P Q+DVN+H Sbjct: 241 DGARKRGALQYFFVNGRFMRHPYFHKAVMAAYEAIIPQGTMPNYFLYFDLEPSQIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ I+F + I I I++A++ + +K + P ++ + Sbjct: 301 PTKTEIKFSDEQAIFKLIGVVIREALSSSNAVPAIDFDRKELIDIPAYQGPGKNVVRPPV 360 Query: 361 SLTNTQEKL-------FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI----- 408 L + ++ +R + D+ ++ E E+ + Sbjct: 361 DLDPSYNPFKETGLTEPIRSSRRQSPDMGWNELFKQFEAKRDAEKMAEPPIRSEELFAST 420 Query: 409 --------------ACAQIHQ-NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 +H+ Y+++ + GL +VD H AH+R+++++ D + I Sbjct: 421 DFTPSAVSATPSTDMLCYVHRGRYLVTTLSRGLALVDFHRAHKRILYDRFMADESRRHIE 480 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 Q LL PE+++ + + + ++L +G G ++ ++ P + ++ Sbjct: 481 QQQLLFPELLEFNPSDASAVKAAVDELQSVGFDLSPLGVSSYSLLAAPVQIID-CAADVV 539 Query: 514 RDIIDEIIDSSTTYTLQDRIENILAT-MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 RD+I ++ + +++ ++AT +A Y +I G+ + E + LL E+ + +S+ Sbjct: 540 RDVIHTTLEDGRSSH--EQMLELIATQIAEYQAIPCGKTPTAEEASDLLAELFASNDSTY 597 Query: 573 CNHGRPTFIKLKLSDIEKLFG 593 G+ ++ +DI + F Sbjct: 598 TPDGKLIVSIIEEADIARRFE 618 >gi|317152531|ref|YP_004120579.1| DNA mismatch repair protein MutL [Desulfovibrio aespoeensis Aspo-2] gi|316942782|gb|ADU61833.1| DNA mismatch repair protein MutL [Desulfovibrio aespoeensis Aspo-2] Length = 641 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 179/654 (27%), Positives = 280/654 (42%), Gaps = 74/654 (11%) Query: 1 MK----IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQI 56 M IR L + NQIAAGE++ERPS +KEL+ENSLDA ++RV+ + GG+ + Sbjct: 1 MPDTHEIRVLPPGLKNQIAAGEVVERPSSVVKELVENSLDAGATRVDVTVEQGGRGLIVV 60 Query: 57 TDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ 114 DNG G+ + ++ +AV RH TSK+ +D S I +FGFRGEALPSI +VS T++SR Sbjct: 61 QDNGRGIAAAQLELAVTRHATSKLRTFEDLSAIASFGFRGEALPSIASVSRFTMISREQG 120 Query: 115 NNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRR 174 A I + G +++ R A+ GT VEVR+LF PARL FLK+E E D + R Sbjct: 121 AADAAFIEVRGGEVAGRRIAALAAGTRVEVRELFANTPARLKFLKAESTENKRCQDTLMR 180 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 +A+A+P F+ + +++ + + R+ + + Sbjct: 181 IALAHPGCGFSLTVNGREVFRLPA---DQDLATRLRTFWPPSACEGLGPFDFERLGYRAH 237 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G G P + ++ +++NGR VQDK +L +R AY + YP VL LE+ + Sbjct: 238 GVAGSPAMAQSRGDRILLYVNGRPVQDKLMLGAVRQAYKGMLLSREYPQAVLFLELPRDE 297 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN--------------------------- 327 VDVNVHPAK +RF + + + I I +A+ Sbjct: 298 VDVNVHPAKLEVRFIEESRVFSTIRGGIVQALAVLTDQGRGYLGPDSGPDSDQRDRRDVS 357 Query: 328 ---------KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNT-QEKLFLQENRLS 377 G + S SF ++ +YA + L L+ Sbjct: 358 GAYRQDDRPDYGHRSPSGPVGHDAPSFRENGQKFPSYREYAAFASRPVPMDLGPGRGGLA 417 Query: 378 TNDLLPSDDPTYSEDN---------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D + + D + Q+ Y++ + LV+ Sbjct: 418 GADPDHAPGYSSEPDPGLDPARFNVTDAARPAPLAGTDYVYLGQVADTYLVLRRGQSLVL 477 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 VDQHAAHER++ MR++ SQ L P +DL E + + L +G E Sbjct: 478 VDQHAAHERVLLAAMRRERTRG--DSQPLALPLEMDLHPSEAETLDGLRDGLRAMGFILE 535 Query: 489 --RFGP------NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 G + + +R IP L + + ++++ M Sbjct: 536 TREAGESGASAAHRLLVRGIPPTLDTGRARE---------YLADALAARARTLDDLWTMM 586 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C +I++G+ + E LL + P C HGRP + ++EKLF R Sbjct: 587 SCKTAIKAGQPLAVDEALALLDVWLRTPEREYCPHGRPVVVSWNPQELEKLFKR 640 >gi|251772665|gb|EES53229.1| DNA mismatch repair protein MutL [Leptospirillum ferrodiazotrophum] Length = 643 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 162/645 (25%), Positives = 274/645 (42%), Gaps = 60/645 (9%) Query: 7 SEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSE 66 ++NQIAAGE+IERPS +KEL+ENSLDA + RV V+ G ++ DNG G+ + Sbjct: 2 PAALVNQIAAGEVIERPSSVLKELLENSLDAGAKRVSVVVDLTGDGLIRVEDNGSGIMKD 61 Query: 67 EIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAIS 124 ++P+A RH TSKIS DD + GFRGEAL SI +V+ +TL +R + G+++ Sbjct: 62 DLPLAFLRHATSKISSFDDLVRARSMGFRGEALASIASVARVTLETRHQSDAVGSRLEWV 121 Query: 125 GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF 184 + + P GT + VRDLFF +P R +L+S Q E +T+ +R+A+ +P V Sbjct: 122 PGEDPLISPWDRPVGTAISVRDLFFNVPVRKKYLRSPQTELGHLTEAFQRVALGFPDVHL 181 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNR 244 ST + + + T RI + + + ++ + R Sbjct: 182 ELSTPSRKIFSLPARHTP---LLRILDLYPTFQEEDLLYHERGGEDLRISLVLLRADRLR 238 Query: 245 GNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKS 304 + ++F+N R ++ + I + I +P + L++ P ++DVNVHP K Sbjct: 239 KDRQFQHLFVNRRWIRHPALFEAITQGASGRISRDLHPGAWVYLDLPPDRLDVNVHPTKR 298 Query: 305 YIRFRNPTIIRNFIIQSIQKA-----------------------------INKKGISTSS 335 +R + I + + + I +A + + + Sbjct: 299 EVRLLDGDRIFSLLRRVISEAFEGFSEKIFLEQPSSDSSRPYSSSPLPDPLGTRESLPET 358 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATS------------------------LTNTQEKLFL 371 ++ S F ++ P + LFL Sbjct: 359 EDNRPDSSLFSKEGKTSWTPPPRSAPRGMAPDLPPSDNASDPRATTPPPYRAGAPSPLFL 418 Query: 372 QENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 QE + + + P + V + Q Y+++ + L +VD Sbjct: 419 QERKEAGPRPSFREIPELLKSLPSVFSGNRPDPETISVVGQWVGTYLVAFAGEDLWLVDW 478 Query: 432 HAAHERLIFEKMRQD--FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 H AHER+ +++ RQ + +TLL P + + E+L LG +R Sbjct: 479 HTAHERINYDRYRQALLGDGKGGGRRTLLFPVSYRVAPSVADNLDSRLEELSHLGFDIDR 538 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 GP+ IR +P +L + + + L ++ DRI+ L T++C+ S+R Sbjct: 539 SGPDLFRIRSVPTLLDESDPTRALDELGAHSQGFEVPILRSDRIDETLMTLSCHRSVRRN 598 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + E RL+RE+ + + C HGRPT + L S I+ FGR Sbjct: 599 DVFGTEEGARLIRELLDSDHPYSCPHGRPTILSLSHSAIDTWFGR 643 >gi|161506973|ref|YP_001576927.1| DNA mismatch repair protein [Lactobacillus helveticus DPC 4571] gi|172048183|sp|A8YTI0|MUTL_LACH4 RecName: Full=DNA mismatch repair protein mutL gi|160347962|gb|ABX26636.1| DNA mismatch repair protein [Lactobacillus helveticus DPC 4571] Length = 636 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 175/639 (27%), Positives = 290/639 (45%), Gaps = 55/639 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+ENSLDA ++R+ G + DNG Sbjct: 3 KIHELSENLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFIDAGLKQIVVQDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKIS+ D + T GFRGEAL SI AVSH+ +++ G Sbjct: 63 GIARDQVDLAFTRHATSKISNEHDLFKVSTLGFRGEALASISAVSHVEIVTATENA-IGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG A GT + VRDLFF PARL +L+S + E I D+I R+++ Y Sbjct: 122 KADFSGGSKKGQEDAASQKGTKITVRDLFFNTPARLKYLRSPRTEIMKIVDIINRLSLGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT S + + NGN + ++ V G K ++ + G Sbjct: 182 PHVSFTLSNTGK---VLFRTTGNGNLKQTVANVYGRHIAEKMESFEAKDSDFKITGLMSK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N + +NGR +++ + + I Y + YP+VV+ + +DP VDVNV Sbjct: 239 PELTRSTRNFISILLNGRYIKNFQLNNAIMDGYGSKLAARHYPIVVITIHVDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---------SVLSKKMISSFHQD-- 348 HP K +R + I +I A+ K +S L ++ + +QD Sbjct: 299 HPTKQEVRLSKEKELSRLITDAISDALLDKTEQSSGFANLENKRETLVDQLEFNLNQDVV 358 Query: 349 ----NAPKTHLPKYATSLTNTQEKLFLQENRLSTND------------------------ 380 P+ H QE +E + T Sbjct: 359 NTTRKTPEVHEEAEKPEFLVKQEAKNSEEPKNETEHNYVDINIPREDDQYIITKTWDKNV 418 Query: 381 ------LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAA 434 + S+ E +E+ A + +I Y++++ L ++DQ AA Sbjct: 419 ALQQKLMPFSNKKVDQEVISTGDETLANNLPRLAYVGKIDT-YLLAENDGDLYLIDQVAA 477 Query: 435 HERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA 494 RL FE++ Q S KI Q LLTP +++ + I + + +LGI + FG N+ Sbjct: 478 RRRLQFEQIYQTITSKKIVQQGLLTPIVLEFGNLDFLQIKDKIYQIKQLGIYLDEFGQNS 537 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQS 554 +R P + ++ + +R+I+D ++ T Q+ + + A A S++ + + Sbjct: 538 FIVRSYPTWIHD-HVEESIREILDNYLNLDKGKT-QNLFKRVAALEAKR-SVKGKINLSA 594 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E +++ ++ K + GR +++ +++ K+F Sbjct: 595 AEGTQIITDLRKTSDPYHDADGRLILVRISQNELRKMFK 633 >gi|213964245|ref|ZP_03392477.1| DNA mismatch repair protein MutL [Capnocytophaga sputigena Capno] gi|213953106|gb|EEB64456.1| DNA mismatch repair protein MutL [Capnocytophaga sputigena Capno] Length = 612 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 155/615 (25%), Positives = 287/615 (46%), Gaps = 35/615 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + NQIAAGE+I+RP+ A+KEL+EN++DA ++ ++ +I GK+ Q+ DNG G Sbjct: 5 IRLLPDHVANQIAAGEVIQRPASAVKELMENAIDARATEIKLLIKDAGKTLVQVIDNGVG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M++ + MA +RH TSKI ++D ++ T GFRGEAL SI A++H+ + ++ P++ G + Sbjct: 65 MSTTDARMAFERHATSKIQKAEDLFHLQTKGFRGEALASIVAIAHVEMQTKRPEDELGTE 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G KI+ P GT + +++LFF IPAR NFLKS+ VE I D R+A+A+P Sbjct: 125 IHIEGSKITRQEPCVCPTGTSIAMKNLFFNIPARRNFLKSDTVEFRHILDEFHRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI-TLQGYTGI 239 + F + + + NF +RI + G V + + + + G+ Sbjct: 185 AIHFYLYNNGNELFNLPAT----NFRQRIVHLFGGKTNEKLVPIIAEDTPLVKISGFIVK 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + N ++ +N R V+++++ I AY I + P + LE+DP +D+N+ Sbjct: 241 PEYLAKTKNLQFLMVNHRFVKNQYLNHAITAAYEGLIHADQKPEYFISLEVDPATIDINI 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ I+F I + +++ ++ + I+ + SK +F K P++ Sbjct: 301 HPTKTEIKFEEEHSIYALLKSAVKHSLGQFNIAPTLDFSKD--PTFDIPYNYKDKAPEFP 358 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE--------------------- 398 + F +E ++ S+ Y + E Sbjct: 359 RIQVDPNFNPFKEEYESRSSSRSSSNFGNYPKKTASWESLYMGIESAVDTSASETIVSSL 418 Query: 399 -SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 G + + Y+++ L+I++ + AH+R++FE ++ S+ Q L Sbjct: 419 FEAEPTKNQGKKIIALAKKYLVTTLGGELIIINCNRAHQRILFEDFMKNLQSSHTAVQQL 478 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 + P + E +I + E G + + IP L+ IP + +++ Sbjct: 479 MFPYELPFAPHELEVIAQLRELFESSGFMFTIESEK-VVVSGIPLHLTDSEIPNIFHELL 537 Query: 518 DEIIDSSTTYTLQDRIENILATMACYG-SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 + I+ T ++ + A C ++++G+ + E L+ + G Sbjct: 538 QQHIE--ALPTTENTQKEAFAKALCKSLAVKTGQVLSEEEQETLINNLFSCQEVLISPFG 595 Query: 577 RPTFIKLKLSDIEKL 591 + + L ++I+ L Sbjct: 596 KRIYYSLSANEIDNL 610 >gi|254304060|ref|ZP_04971418.1| DNA mismatch repair protein MutL [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324252|gb|EDK89502.1| DNA mismatch repair protein MutL [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 649 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 187/664 (28%), Positives = 313/664 (47%), Gaps = 89/664 (13%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N IAAGE++E P+ IKELIENSLDA S ++ + GG I D+G Sbjct: 3 RIRILDESVSNAIAAGEVVENPTSMIKELIENSLDAGSKEIKLEVWNGGLD-ISINDSGC 61 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++++RH TSKI +D NI T+GFRGEAL SI +VS + L SR G Sbjct: 62 GMSKEDLLLSIERHATSKIFTKEDLFNIRTYGFRGEALSSIASVSKMILSSRTEDMQNGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G K+++++ + N GT +E++DLF+ PAR FL+ E E I D+ R A+A Sbjct: 122 QMNVLGGKVTNLKDIQRNIGTQIEIKDLFYNTPARKKFLRKENTEYLNIKDIFLREALAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + K ++ I ++ G++++ N + + GY G Sbjct: 182 PSVKFILNIEGKESIK----TSGNGIENAILEIFGKNYLKNFSKFSL--------GYLGN 229 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N + +VFINGR+V+ K + + AY + G+YP ++ LE++P ++DVNV Sbjct: 230 ANLFKANRDSIFVFINGRSVKSKIVEEAVIAAYHTKLMKGKYPTALIFLEVEPSEIDVNV 289 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HP+K ++F N I + + I+ Sbjct: 290 HPSKKVVKFANQNAIFDLVKGEIENFFTDDEDFISPYIETENEVEDDIKIENTKNNFLDI 349 Query: 329 -------KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 + S SV+ K+ S +N + ++ T T+ + E + + ++ Sbjct: 350 NDFKDDIQDFSQLSVVKKEDYSKKDYNNIRVEKEKTFGSAGTTTESAIVPNEIKEDSKNI 409 Query: 382 LPSDDPTYSEDN-------------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D + + + E ++ Q +I ++ + D VI Sbjct: 410 ENFDSSVKNVISIDNNKVDINDDIVEKSENNKYIFNQEDTNRGKIFDDFSSLKNIDFKVI 469 Query: 429 V------------------DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 DQH HER+++EK++Q++ + +T Q+LL P +L E Sbjct: 470 GQVFDTFILVERNGLLEIYDQHIIHERILYEKLKQEYYNHSMTKQSLLVPIRFELDPREK 529 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 L +E+ E G + F N I +R IP + + + + R+I+D I + Sbjct: 530 QLALENIEIFSSFGFDIDDFDKNEILLRSIPTMNLRDSYENIFREILDNISKNKDV---- 585 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 D ENI+ +M+C G+I++ K+ EM ++ ++ + C HGRP +K+ L D+EK Sbjct: 586 DIRENIIVSMSCKGAIKANYKLTIEEMYSMVAKLHEVGE-YTCPHGRPIIVKMSLLDLEK 644 Query: 591 LFGR 594 LF R Sbjct: 645 LFKR 648 >gi|328462817|gb|EGF34684.1| DNA mismatch repair protein [Lactobacillus helveticus MTCC 5463] Length = 636 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 176/639 (27%), Positives = 290/639 (45%), Gaps = 55/639 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+ENSLDA ++R+ G + DNG Sbjct: 3 KIHELSENLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFIDAGLKQIVVQDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKIS+ D + T GFRGEAL SI AVSH+ +++ G Sbjct: 63 GIARDQVDLAFTRHATSKISNEHDLFKVSTLGFRGEALASISAVSHVEIVTATENA-IGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG A GT + VRDLFF PARL +L+S + E I D+I R+++ Y Sbjct: 122 KADFSGGSKKGQEDAASQKGTKITVRDLFFNTPARLKYLRSPRTEIMKIVDIINRLSLGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT S + + NGN + ++ V G K ++ + G Sbjct: 182 PHVSFTLSNTGK---VLFRTTGNGNLKQTVANVYGRHIAEKMESFEAKDSDFKITGLMSK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N V +NGR +++ + + I Y + YP+VV+ + +DP VDVNV Sbjct: 239 PVLTRSTRNFISVLLNGRYIKNFQLNNAIMDGYGSKLAARHYPIVVIAIHVDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---------SVLSKKMISSFHQD-- 348 HP K +R + I +I A+ K +S L ++ + +QD Sbjct: 299 HPTKQEVRLSKEKELSRLITGAISDALLDKTEQSSGFANLENKRETLVDQLEFNLNQDVV 358 Query: 349 ----NAPKTHLPKYATSLTNTQEKLFLQENRLSTND------------------------ 380 P+ H QE +E + T Sbjct: 359 NTTRKTPEVHEEAEKPEFLVKQEAKNSEEPKNETEHNYVDINIPREDDQYIITKTWDKNV 418 Query: 381 ------LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAA 434 + S+ E +E+ A + +I Y++++ L ++DQ AA Sbjct: 419 ALQQKLMPFSNKKVDQEVISTGDETLANNLPRLAYVGKIDT-YLLAENDGDLYLIDQVAA 477 Query: 435 HERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA 494 RL FE++ Q S KI Q LLTP +++ + I + + +LGI + FG N+ Sbjct: 478 RRRLQFEQIYQTITSKKIVQQGLLTPIVLEFGNLDFLQIKDKIYQIKQLGIYLDEFGQNS 537 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQS 554 +R P + ++ + +R+I+D ++ T Q+ + + A A S++ + + Sbjct: 538 FIVRSYPTWIHD-HVEESIREILDNYLNLDKGKT-QNLFKRVAALEAKR-SVKGKINLSA 594 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E +++ ++ K + GR +++ +++ K+F Sbjct: 595 AEGTQIITDLRKTSDPYHDADGRLILVRISQNELRKMFK 633 >gi|308188271|ref|YP_003932402.1| DNA mismatch repair protein mutL [Pantoea vagans C9-1] gi|308058781|gb|ADO10953.1| DNA mismatch repair protein mutL [Pantoea vagans C9-1] Length = 619 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 164/611 (26%), Positives = 274/611 (44%), Gaps = 55/611 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDVDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ MA+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 CGIVKSELSMALARHATSKIGSLDDLEAIMSLGFRGEALASISSVSRLTLTSRTADQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +P A GT +EV DLF+ PAR F+++E+ E I +VIRR+A+ Sbjct: 121 WQAYAEGRDMAVTVKPAAHPCGTTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + S + S R++ + G F+ +A+ ++ + ++++L+G+ Sbjct: 181 ARFDVALSLSHNGKMMRQYRAVSEESQRERRLASICGTTFMQHALRIDWQHDDLSLRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++NGR ++DK I IR A+ + + P VL LEIDP QVDV Sbjct: 241 ADPAGSRQVTDLQYCYVNGRMMRDKLINHAIRQAFQTQLQDDQQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-KKMISSFHQDNAPKTHLP 356 NVHPAK +RF ++ +FI Q + A+ T L ++ + +N Sbjct: 301 NVHPAKHEVRFHQSRLVHDFIYQGVVSALQAMAAPTLPALQAEEPAPRWQPENRQAAGGN 360 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDP----------------------------- 387 +A + EK R + + Sbjct: 361 HFAQPAASASEKKSAASGRETQPAPAWQNKENVYRQREGAVYQQLLKNPVSTSSPTKARE 420 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 + + A G +H ++ + + L+++ A L ++ + Sbjct: 421 PIARQAERPSPLAAHAQSFGRVLTVLHHHFALLEQDQTLMLMALPVAARWLKQAQL--EP 478 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + Q LL P + + + E E+ L+++GI+ + G + + +R +P L + Sbjct: 479 GEEGLKPQPLLIPVRLKIAQEERQAAKENSSLLNQMGIELQPEGDH-VTLRAVPLPLRTQ 537 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY----GSIRSGRKMQSIEMNRLLRE 563 N+ L+ +++ + Q + +A S + LL E Sbjct: 538 NLQILIPELLGYLARQQENSATQ-----LAQWLARRQETESS-----DWNHSQAINLLAE 587 Query: 564 MEKNPNSSQCN 574 +E+ C Sbjct: 588 LERL-----CP 593 >gi|83721397|ref|YP_441867.1| DNA mismatch repair protein [Burkholderia thailandensis E264] gi|83655222|gb|ABC39285.1| mismatch repair protein MutL [Burkholderia thailandensis E264] Length = 705 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 175/664 (26%), Positives = 283/664 (42%), Gaps = 88/664 (13%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 56 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISITDDGCG 115 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + + E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + + Sbjct: 116 IPAAELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDDAHATR 175 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 176 I---DAQTGVLAPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 232 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E++ + + G G+P Sbjct: 233 DVAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 288 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 289 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 348 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---SKKMISSFHQDNAPKTHLPK 357 P+K +RFR+ I F+ ++Q+A+ + ++ +S A P Sbjct: 349 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHLSPVEPAQAGSPAAPS 408 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS--EDNDPVEESEATHYQLGIACAQIHQ 415 + + + N L T P+ +A + H Sbjct: 409 ASFVRPDAAAAGAGVGHPAPGNTWLRQSRMTQGTLPVAQPLALYDALFGRKDSGAGTPHG 468 Query: 416 NYIISQTTD------------------GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + + D A+ + E+ L Sbjct: 469 TTGVLEARDAPDAPGAPLFASAPGGAAMPAFSAAGASDPAMHDEQPLGFAVGQIHGIYVL 528 Query: 458 LTPEIIDLLEGECALIMEHD-EDLHRLGIKAERFGPNAIAI---------REIPAILSKK 507 ++ A E R +A+ P + Sbjct: 529 AQNARGLVIVDMHAAHERILYEQFKR------ALADRTVAVQTLLIPVSMTATPVEVGTA 582 Query: 508 NIPQLLRDIIDEI-----------------IDSSTTYTLQDRIENILA------------ 538 R+ +D + LQ +LA Sbjct: 583 EEE---RETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLADLHAFGGSRVLT 639 Query: 539 --------TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRPT+ +L L D++K Sbjct: 640 ERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLGDLDK 699 Query: 591 LFGR 594 LF R Sbjct: 700 LFMR 703 >gi|167618808|ref|ZP_02387439.1| DNA mismatch repair protein [Burkholderia thailandensis Bt4] gi|257138037|ref|ZP_05586299.1| DNA mismatch repair protein [Burkholderia thailandensis E264] Length = 679 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 175/664 (26%), Positives = 283/664 (42%), Gaps = 88/664 (13%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + + E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + + Sbjct: 90 IPAAELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDDAHATR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 150 I---DAQTGVLAPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E++ + + G G+P Sbjct: 207 DVAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 263 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 322 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---SKKMISSFHQDNAPKTHLPK 357 P+K +RFR+ I F+ ++Q+A+ + ++ +S A P Sbjct: 323 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHLSPVEPAQAGSPAAPS 382 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS--EDNDPVEESEATHYQLGIACAQIHQ 415 + + + N L T P+ +A + H Sbjct: 383 ASFVRPDAAAAGAGVGHPAPGNTWLRQSRMTQGTLPVAQPLALYDALFGRKDSGAGTPHG 442 Query: 416 NYIISQTTD------------------GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + + D A+ + E+ L Sbjct: 443 TTGVLEARDAPDAPGAPLFASAPGGAAMPAFSAAGASDPAMHDEQPLGFAVGQIHGIYVL 502 Query: 458 LTPEIIDLLEGECALIMEHD-EDLHRLGIKAERFGPNAIAI---------REIPAILSKK 507 ++ A E R +A+ P + Sbjct: 503 AQNARGLVIVDMHAAHERILYEQFKR------ALADRTVAVQTLLIPVSMTATPVEVGTA 556 Query: 508 NIPQLLRDIIDEI-----------------IDSSTTYTLQDRIENILA------------ 538 R+ +D + LQ +LA Sbjct: 557 EEE---RETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLADLHAFGGSRVLT 613 Query: 539 --------TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRPT+ +L L D++K Sbjct: 614 ERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLGDLDK 673 Query: 591 LFGR 594 LF R Sbjct: 674 LFMR 677 >gi|260102902|ref|ZP_05753139.1| DNA mismatch repair protein HexB [Lactobacillus helveticus DSM 20075] gi|260083291|gb|EEW67411.1| DNA mismatch repair protein HexB [Lactobacillus helveticus DSM 20075] Length = 636 Score = 428 bits (1101), Expect = e-117, Method: Composition-based stats. Identities = 175/639 (27%), Positives = 291/639 (45%), Gaps = 55/639 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+ENSLDA ++R+ G + DNG Sbjct: 3 KIHELSENLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFIDAGLKQIVVQDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKIS+ D + T GFRGEAL SI AVSH+ +++ G Sbjct: 63 GIARDQVDLAFTRHATSKISNEHDLFKVSTLGFRGEALASISAVSHVEIVTATENA-IGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG A GT + VRDLFF PARL +L+S + E I D+I R+++ Y Sbjct: 122 KADFSGGSKKGQEDAASQKGTKITVRDLFFNTPARLKYLRSPRTEIMKIVDIINRLSLGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT S + + NGN + ++ V G K ++ + G Sbjct: 182 PHVSFTLSNTGK---VLFRTTGNGNLKQTVANVYGRHIAEKMESFEAKDSDFKITGLMSK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N + +NGR +++ + + I Y + YP+VV+ + +DP VDVNV Sbjct: 239 PELTRSTRNFISILLNGRYIKNFQLNNAIMDGYGSKLAARHYPIVVIAIHVDPMLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---------SVLSKKMISSFHQDNA 350 HP K +R + I +I A+ K +S L ++ + +QD Sbjct: 299 HPTKQEVRLSKEKELSRLITGAISDALLDKTEQSSGFANLENKRETLVDQLEFNLNQDVV 358 Query: 351 PKT------------------HLPKYATSLTNTQEKLFLQENRLSTND------------ 380 T K + N E ++ N +D Sbjct: 359 NTTRKTPEVHEEAEKPEFLVKQKAKNSEEPKNETEHNYVDINIPREDDQYIITKTWDKNV 418 Query: 381 ------LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAA 434 + S+ E +E+ A + +I Y++++ L ++DQ AA Sbjct: 419 ALQQKLMPFSNKKVDQEVISTGDETLANNLPRLAYVGKIDT-YLLAENDGDLYLIDQVAA 477 Query: 435 HERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA 494 RL FE++ Q S KI Q LLTP +++ + I + + +LGI + FG N+ Sbjct: 478 RRRLQFEQIYQTITSKKIVQQGLLTPIVLEFGNLDFLQIKDKIYQIKQLGIYLDEFGQNS 537 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQS 554 +R P + ++ + +R+I+D ++ T Q+ + + A A S++ + + Sbjct: 538 FIVRSYPTWIHD-HVEESIREILDNYLNLDKGKT-QNLFKRVAALEAKR-SVKGKINLSA 594 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E +++ ++ K + GR +++ +++ K+F Sbjct: 595 AEGTQIITDLRKTSDPYHDADGRLILVRISQNELRKMFK 633 >gi|261415095|ref|YP_003248778.1| DNA mismatch repair protein MutL [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371551|gb|ACX74296.1| DNA mismatch repair protein MutL [Fibrobacter succinogenes subsp. succinogenes S85] Length = 644 Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 181/648 (27%), Positives = 307/648 (47%), Gaps = 65/648 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I LS++IIN+IAAGE+IERP+ A+KELIEN++DA ++R++ I GGK Q+TDNG G Sbjct: 4 IHLLSDEIINKIAAGEVIERPASAVKELIENAIDAGATRIQVQIEQGGKKKIQVTDNGKG 63 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M + ++ + RH TSK+ +DD ++HT GFRGEA+ SI AVS LT+ S + +G + Sbjct: 64 MGAADLDLCYLRHTTSKLTNADDLFHLHTNGFRGEAVASIAAVSKLTITSATQEGESG-R 122 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G ++ + + GT V DLF+ P R FL SE E + I D++ + AI++P Sbjct: 123 IIVKGGEVIEKEDIQASRGTTFLVEDLFYNTPVRRTFLGSETSECSRILDIVLKTAISHP 182 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++ F + + G RI++ IG + ++ + + GY Sbjct: 183 EIRFDYKVGDRTVFT----GVPGELRSRIAEAIGSKVAKGLLPVDYTEAGVHVTGYISPT 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY--PVVVLLLEIDPRQVDVN 298 T G N ++F+ R +++K + + AY P G PV VL L++ + D+N Sbjct: 239 TETNGKRNHQFLFMRNRPIENKMVSKAVSQAYE---PYGAQCKPVTVLFLDMPDMEFDIN 295 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-------------------- 338 VHPAK +RF N ++ + +I+ K + S ++ Sbjct: 296 VHPAKREVRFANGNLVFLVVTHAIRDTFTKDLEAHSPIIDLSDEFMGGTTPASQTTPAQP 355 Query: 339 -KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP----------SDDP 387 + Q++ P + + A ++ Q+ R S SD Sbjct: 356 AMPETPAQPQNDLPWENPFQQAKPYAAASQQPIQQQARPSFASKPYAQPAKPVNSLSDKK 415 Query: 388 TYSEDNDPVEE---------------------SEATHYQLGIACAQIHQNYIISQTTDGL 426 + + +D V++ + QI YI + ++GL Sbjct: 416 SKYDVSDDVQDLFSLPEYGKIISLEPDHSKPAPPPETPWAPPSFFQIANTYIAGEDSNGL 475 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKI-TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 +I+DQHAAH R++FE+ + + + SQ LL PE+IDL + E + DE L +LG Sbjct: 476 LIIDQHAAHTRVLFEQAMESLQNNIMQDSQELLFPELIDLSKQEKEIFRNVDEQLRKLGF 535 Query: 486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 E FG + IR IP+ L + + D ++++ ++ T + E I + A + Sbjct: 536 FVEPFGGDTYQIRSIPSALPLSRAAKAVHDFLNDVDENDTKNDMVKFQEAIAKSWAKTNA 595 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 ++G K++ E+ L+ ++ + + G PT ++L L ++ K F Sbjct: 596 YQAGDKLKPEEITALVGQLMITQDPLKSPFGSPTLMRLTLEELSKKFR 643 >gi|323465931|gb|ADX69618.1| DNA mismatch repair protein mutL [Lactobacillus helveticus H10] Length = 636 Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 176/639 (27%), Positives = 291/639 (45%), Gaps = 55/639 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+ENSLDA ++R+ G + DNG Sbjct: 3 KIHELSENLTNQIAAGEVIERPASVVKELVENSLDAGATRIRVDFIDAGLKQIVVQDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKIS+ D + T GFRGEAL SI AVSH+ +++ G Sbjct: 63 GIARDQVDLAFTRHATSKISNEHDLFKVSTLGFRGEALASISAVSHVEIVTATENA-IGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG A GT + VRDLFF PARL +L+S + E I D+I R+++ Y Sbjct: 122 KADFSGGSKKGQEDAASQKGTKITVRDLFFNTPARLKYLRSPRTEIMKIVDIINRLSLGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT S + + NGN + ++ V G K ++ + G Sbjct: 182 PHVSFTLSNTGK---VLLRTTGNGNLKQTVANVYGRHIAEKMESFEAKDSDFKITGLMSK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N + +NGR +++ + + I YA + YP+VV+ + +DP VDVNV Sbjct: 239 PELTRSTRNFISILLNGRYIKNFQLNNAIMDGYASKLAARHYPIVVIAIHVDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---------SVLSKKMISSFHQD-- 348 HP K +R + I +I A+ K +S L ++ + +QD Sbjct: 299 HPTKQEVRLSKEKELSRLITGAISDALLDKTEQSSGFANLENKRETLVDQLEFNLNQDVV 358 Query: 349 ----NAPKTHLPKYATSLTNTQEKLFLQENRLSTND------------------------ 380 P+ H QE +E + T Sbjct: 359 NTTRKTPEVHEEAEKPEFLVKQEAKNSEEPKDETEHNYVDINIPREDDQYIITKTWDKNV 418 Query: 381 ------LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAA 434 + S+ E +E+ A + +I Y++++ L ++DQ AA Sbjct: 419 ALQQKLMPFSNKKVDQEVISTGDETLANNLPRLAYVGKIDT-YLLAENDGDLYLIDQVAA 477 Query: 435 HERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA 494 RL FE++ Q S KI Q LLTP +++ + I + + +LGI + FG N+ Sbjct: 478 RRRLQFEQIYQTITSKKIVQQGLLTPIVLEFGNLDFLQIKDKIYQIKQLGIYLDEFGQNS 537 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQS 554 +R P + ++ + +R+I+D ++ T Q+ + + A A S++ + + Sbjct: 538 FIVRSYPTWIHD-HVEESIREILDNYLNLDKGKT-QNLFKRVAALEAKR-SVKGKINLSA 594 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E +++ ++ K + GR +++ +++ K+F Sbjct: 595 AEGTQIITDLRKTSDPYHDADGRLILVRINQNELRKMFK 633 >gi|302327535|gb|ADL26736.1| DNA mismatch repair protein MutL [Fibrobacter succinogenes subsp. succinogenes S85] Length = 644 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 180/648 (27%), Positives = 307/648 (47%), Gaps = 65/648 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I LS++IIN+IAAGE+IERP+ A+KELIEN++DA ++R++ I GGK Q+TDNG G Sbjct: 4 IHLLSDEIINKIAAGEVIERPASAVKELIENAIDAGATRIQVQIEQGGKKKIQVTDNGKG 63 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M + ++ + RH TSK+ +DD ++HT GFRGEA+ SI AVS LT+ S + +G + Sbjct: 64 MGAADLDLCYLRHTTSKLTNADDLFHLHTNGFRGEAVASIAAVSKLTITSATQEGESG-R 122 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G ++ + + GT V DLF+ P R FL SE E + I D++ + AI++P Sbjct: 123 IIVKGGEVIEKEDIQASRGTTFLVEDLFYNTPVRRTFLGSETSECSRILDIVLKTAISHP 182 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++ F + + G RI++ IG + ++ + + GY Sbjct: 183 EIRFDYKVGDRTVFT----GVPGELRSRIAEAIGSKVAKGLLPVDYTEAGVHVTGYISPT 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY--PVVVLLLEIDPRQVDVN 298 T G N ++F+ R +++K + + AY P G PV VL L++ + D+N Sbjct: 239 TETNGKRNHQFLFMRNRPIENKMVSKAVSQAYE---PYGAQCKPVTVLFLDMPDMEFDIN 295 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-------------------- 338 +HPAK +RF N ++ + +I+ K + S ++ Sbjct: 296 IHPAKREVRFANGNLVFLVVTHAIRDTFTKDLEAHSPIIDLSDEFMGGTTPASQTTPAQP 355 Query: 339 -KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP----------SDDP 387 + Q++ P + + A ++ Q+ R S SD Sbjct: 356 AMPETPAQPQNDLPWENPFQQAKPYAAASQQPIQQQARPSFASKPYAQPAKPVNSLSDKK 415 Query: 388 TYSEDNDPVEE---------------------SEATHYQLGIACAQIHQNYIISQTTDGL 426 + + +D V++ + QI YI + ++GL Sbjct: 416 SKYDVSDDVQDLFSLPEYGKIISLEPDHSKPAPPPETPWAPPSFFQIANTYIAGEDSNGL 475 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKI-TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 +I+DQHAAH R++FE+ + + + SQ LL PE+IDL + E + DE L +LG Sbjct: 476 LIIDQHAAHTRVLFEQAMESLQNNIMQDSQELLFPELIDLSKQEKEIFRNVDEQLRKLGF 535 Query: 486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 E FG + IR IP+ L + + D ++++ ++ T + E I + A + Sbjct: 536 FVEPFGGDTYQIRSIPSALPLSRAAKAVHDFLNDVDENDTKNDMVKFQEAIAKSWAKTNA 595 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 ++G K++ E+ L+ ++ + + G PT ++L L ++ K F Sbjct: 596 YQAGDKLKPEEITALVGQLMITQDPLKSPFGSPTLMRLTLEELSKKFR 643 >gi|188535087|ref|YP_001908884.1| DNA mismatch repair protein [Erwinia tasmaniensis Et1/99] gi|238689721|sp|B2VCU8|MUTL_ERWT9 RecName: Full=DNA mismatch repair protein mutL gi|188030129|emb|CAO98015.1| DNA mismatch repair protein [Erwinia tasmaniensis Et1/99] Length = 611 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 167/599 (27%), Positives = 284/599 (47%), Gaps = 39/599 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MAIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ MA+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 CGIAKDELAMALARHATSKITSLDDLEAIISLGFRGEALASISSVSRLTLTSRTEAQTEA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q ++ +V+P A GT +EV DLF+ PAR F+++E+ E I ++IRR+A+ Sbjct: 121 WQAYAEGRDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 V+ + + + S +G R+ + G F+++A++++ + E++L G+ Sbjct: 181 VRFDVAISLTHNGKLVRQYRAVSDDGQRERRLGAICGTAFLSHALKIDWQHGELSLHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P+ ++ + Y ++NGR ++D+ I IR AY + + P VL LEIDP QVDV Sbjct: 241 ADPSGSKALSELQYCYVNGRMMRDRLINHAIRQAYEDKLGDRHQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-SSVLSKKMISSFHQDNAPKTHLP 356 NVHPAK +RF ++ +FI Q + + + G T + + + + +N Sbjct: 301 NVHPAKHEVRFHQSRLVHDFIYQGVVSVLQESGAETLPEIATAQPAERWQPENRQAAGGN 360 Query: 357 KY--------------ATSLTNTQEKLFLQENRLSTNDLLPSDDPTY-------SEDNDP 395 + A+S QE ++ + + LL + + S + Sbjct: 361 HFATPAPAAAPRPASTASSSWQRQEPVYQKREGAAYQQLLQTPTRSEEPPLSPASVTQND 420 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 A G + + Y + + GL ++ A L ++ + S + Q Sbjct: 421 APALSAHAQSFGRVLTIVREQYALLEGKKGLALLALTVAERWLKQAQL--EPGSEGLRPQ 478 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P + L + E E L+++GI +F + + +R +P L ++N+ L+ + Sbjct: 479 PLLIPVRLKLDKAERDAGNRCSELLNQMGIDL-KFDAHHVMLRAVPLPLRQQNLQNLIPE 537 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 ++ + Q + A S + + LL E+E+ C Sbjct: 538 MLGYLAQHQDVTAFQ--LAQWFA----RQSASEHQHWNHSQAITLLAEVERL-----CP 585 >gi|291287671|ref|YP_003504487.1| DNA mismatch repair protein MutL [Denitrovibrio acetiphilus DSM 12809] gi|290884831|gb|ADD68531.1| DNA mismatch repair protein MutL [Denitrovibrio acetiphilus DSM 12809] Length = 579 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 166/594 (27%), Positives = 282/594 (47%), Gaps = 20/594 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I LSE + N +AAGE++ERP +KEL+ENS DA ++R+ V+ GG ++TDNG G Sbjct: 4 ILILSEDVANMVAAGEVVERPFNVVKELMENSADAGATRISVVVENGGVGMVRVTDNGRG 63 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++P A+QR TSKI +DD N+ TFGFRGEAL +I +VS ++ S + GA+ Sbjct: 64 ILPDDLPAALQRFATSKIKNADDVYNVKTFGFRGEALAAISSVSDFSIRSCRKDYD-GAE 122 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I S P GT VEVR LF +PARL F KS E I +R ++ P Sbjct: 123 IRIKHGGTPSGVPAPAIEGTTVEVRSLFANVPARLKFFKSFSAEEREIAKFVRFFSVINP 182 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++ S N + + +D V + + L T + Sbjct: 183 NIAIELSINGKN--TYTATAGMDMTARAVQVTREKDL----VYGESEYEGMKLSFVTSLA 236 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T R + V +NGR V+D I+ + TAY IP G++P + L +DP +VDVNVH Sbjct: 237 TVQRYRKDMIIVGVNGRVVKDPSIVQAVVTAYHRMIPDGKFPACAVSLHVDPDKVDVNVH 296 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK+ ++ + I +F+ +I+ ++ G V + S+ H ++ Sbjct: 297 PAKTTVKLLDARDIFSFVHHNIKNRLDDAGH-DQGVQMRTPDSTEH----ITSNSYSRPE 351 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 T + Q +++ + + S + + E + Q+ I+ Sbjct: 352 PDTKYDHQFATQSYDIASEMEVVEYEHRSSAEIVHIPEQSGAESAV-RVVGQLFNTVIVC 410 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 + + +DQH AHER+++EK + + S + P +I++ E E A+ + + Sbjct: 411 EKDGEALFIDQHVAHERVLYEKF-IREAAMTVPSVVMYEPLLINVGEDELAVAEDSKDVF 469 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 + G + E FG ++ + +P + ++I ++ I+ ++++ ++ R M Sbjct: 470 DKFGYEIESFGGESLKVSRVPTDVLNRDIEAQVKGILADMLEERKDTSVDYR----ALVM 525 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C ++++G K++ EM RL+ ++ N C HGRP K + FGR Sbjct: 526 SCKAAVKAGDKLEMHEMRRLVSDLFTTDNPYTCPHGRPIVFKQPEEFFLRKFGR 579 >gi|327395424|dbj|BAK12846.1| DNA mismatch repair protein MutL [Pantoea ananatis AJ13355] Length = 612 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 171/602 (28%), Positives = 282/602 (46%), Gaps = 44/602 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDVEIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ MA+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + N Sbjct: 61 CGIAKNELAMALARHATSKIASLDDLEAIMSLGFRGEALASISSVSRLTLTSRTAEQNEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A G+ +EV DLF+ PAR F+++E+ E I +VIRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPCGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + S + + +G R+ + G F+ +A+ ++ + +++ L+G+ Sbjct: 181 ARFDVAISLSHNGKLMRQYRAVNDDGQRERRLGAICGTTFMQHALRIDWQHDDLVLRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P+ +R ++ Y ++NGR ++DK I IR A+ + ++P VL LEIDP QVDV Sbjct: 241 ADPSGSRQVSDIQYCYVNGRMMRDKLINHAIRQAFQSQLQDDQHPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK----- 352 NVHPAK +RF ++ +FI Q + + + L + + Q + Sbjct: 301 NVHPAKHEVRFHQSRLVHDFIYQGVMSVLQESASPVLPTLQAEEPTPRWQQENRQAAGGN 360 Query: 353 ----------THLPKYATSLTNTQEKLFLQENRL--------STNDLLPSDDPTYSEDND 394 P A + N +E R+ +++ S +P E Sbjct: 361 HFSQPAVTGDAARPSVAPAWQNKDAGYSQREGRVYQQLLKTPASSPATKSAEPAAREPVS 420 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 V A + G + Y + + L+++ A L ++ + + S Sbjct: 421 AVPPLAAHAHSFGRVLTVLEGQYALLEQGQRLLLMALPVATRWLKQAQL--EPTEGGLKS 478 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL P + + E E+ L+ +GI G + I +R +P L +N+ L+ Sbjct: 479 QPLLIPVRLKIASAERKAAQENLSLLNLMGIDLHPEGDH-IILRAVPLPLRTQNLQILIP 537 Query: 515 DIIDEIIDSSTTYTLQDRIENILATM--ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 +++ + Q + LA A + + LL E+E+ Sbjct: 538 ELLGYLARQQENSATQ--LAQWLARREDA------EPQHWNHSQAITLLAELERL----- 584 Query: 573 CN 574 C Sbjct: 585 CP 586 >gi|311030166|ref|ZP_07708256.1| DNA mismatch repair protein [Bacillus sp. m3-13] Length = 594 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 160/594 (26%), Positives = 271/594 (45%), Gaps = 42/594 (7%) Query: 38 ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGE 95 S+ +E + G S ++ DNG G+ E+ A QRH TSKI + D I T GFRGE Sbjct: 4 NSTIIEIELEEAGLSKIRVLDNGDGIEQEDCLTAFQRHATSKIKNENDLFRIRTLGFRGE 63 Query: 96 ALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARL 155 ALPSI +VS + + G ++ G + + + GT + V+ LFF PARL Sbjct: 64 ALPSIASVSLFDITTST-GEVPGTHLSFKGGVLETQELSSSRKGTDIVVQHLFFNTPARL 122 Query: 156 NFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGE 215 ++K+ E I+D++ R+A+A+P +SF S +M + NG+ ++ + G Sbjct: 123 KYMKTIHTELGNISDMVNRLALAHPSISFRLSHNGK---RMLATNGNGDSLHVLAAIYGM 179 Query: 216 DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + + ++ S + ++GY +P R + N INGR V++ ++ IR Y Sbjct: 180 NIAKKMIPIHFTSLDFEVKGYIAMPEVTRASKNYISTIINGRYVKNYTVVRAIREGYHTL 239 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS 335 +P+GRYP+V L + +DP VDVNVHPAK +R + + + I+ +K + S+ Sbjct: 240 LPIGRYPIVYLEVMMDPLLVDVNVHPAKLEVRLSKEDELYRLVAEGIKDVFGQKQLIPSN 299 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQE-------KLFLQENRL------------ 376 K+ + +T + + + T E K ++E+RL Sbjct: 300 SPRKQTSYTEEPKPTQQTFTLQESIPVERTVERQAQPSIKQIVEESRLIQVNEPTETWGD 359 Query: 377 -STNDLLPSDDPTYSEDNDPVEESEATHYQL---------------GIACAQIHQNYIIS 420 + ND S+ ++ +EE E + + Q+H YI++ Sbjct: 360 TNHNDAYQSNQSDEYVEDSFIEEEEIHNEKQPGPSHEKKRESRIPALYPIGQMHGTYIVA 419 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 Q +GL ++DQHAA ER+ +E Q + Q LL P I+ E + EH E Sbjct: 420 QNENGLYLIDQHAAQERINYEYFYQKLGQEERNLQELLVPLTIECSLDEYLFLEEHAEVF 479 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 +GI E FG ++ P + + + ++I+ ++ + D E M Sbjct: 480 EEVGIMLEAFGHQTFIVKAHPVWFPRGEERETIDEMINLCLEKKKI-NISDLREEAAIMM 538 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C +I++ ++ E+ LL + + N C HGRP I ++EK+F R Sbjct: 539 SCKAAIKANHHLRHDEITALLNTLREAENPFTCPHGRPILIHFSSYELEKMFKR 592 >gi|291619092|ref|YP_003521834.1| MutL [Pantoea ananatis LMG 20103] gi|291154122|gb|ADD78706.1| MutL [Pantoea ananatis LMG 20103] Length = 620 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 171/602 (28%), Positives = 282/602 (46%), Gaps = 44/602 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 9 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDVEIEKGGAKLIRIRDNG 68 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ MA+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + N Sbjct: 69 CGIAKNELAMALARHATSKIASLDDLEAIMSLGFRGEALASISSVSRLTLTSRTAEQNEA 128 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A G+ +EV DLF+ PAR F+++E+ E I +VIRR+A+ Sbjct: 129 WQAYAEGRDMDVTVKPAAHPCGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVIRRIAL 188 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + S + + +G R+ + G F+ +A+ ++ + +++ L+G+ Sbjct: 189 ARFDVAISLSHNGKLMRQYRAVNDDGQRERRLGAICGTTFMQHALRIDWQHDDLVLRGWV 248 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P+ +R ++ Y ++NGR ++DK I IR A+ + ++P VL LEIDP QVDV Sbjct: 249 ADPSGSRQVSDIQYCYVNGRMMRDKLINHAIRQAFQSQLQDDQHPAYVLYLEIDPHQVDV 308 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK----- 352 NVHPAK +RF ++ +FI Q + + + L + + Q + Sbjct: 309 NVHPAKHEVRFHQSRLVHDFIYQGVMSVLQESASPVLPTLQAEEPTPRWQQENRQAAGGN 368 Query: 353 ----------THLPKYATSLTNTQEKLFLQENRL--------STNDLLPSDDPTYSEDND 394 P A + N +E R+ +++ S +P E Sbjct: 369 HFSQPAVTGDAARPSVAPAWQNKDAGYSQREGRVYQQLLKTPASSPATKSAEPAAREPVS 428 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 V A + G + Y + + L+++ A L ++ + + S Sbjct: 429 AVPPLAAHAHSFGRVLTVLEGQYALLEQGQRLLLMALPVATRWLKQAQL--EPTEGGLKS 486 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL P + + E E+ L+ +GI G + I +R +P L +N+ L+ Sbjct: 487 QPLLIPVRLKIASAERKAAQENLSLLNLMGIDLHPEGDH-IILRAVPLPLRTQNLQILIP 545 Query: 515 DIIDEIIDSSTTYTLQDRIENILATM--ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 +++ + Q + LA A + + LL E+E+ Sbjct: 546 ELLGYLARQQENSATQ--LAQWLARREDA------EPQHWNHSQAITLLAELERL----- 592 Query: 573 CN 574 C Sbjct: 593 CP 594 >gi|257885711|ref|ZP_05665364.1| DNA mismatch repair protein [Enterococcus faecium 1,231,501] gi|257821567|gb|EEV48697.1| DNA mismatch repair protein [Enterococcus faecium 1,231,501] Length = 702 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 165/699 (23%), Positives = 292/699 (41%), Gaps = 110/699 (15%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ ++ G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A +RH TSKI DD I T GFRGEALPSI +VS +TL + + G Sbjct: 63 GILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMTLETANQEEKQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G ++ RP + GT + V +LFF PARL ++K+ E I D++ R+A+++ Sbjct: 123 YLSLKGGEVIEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + KM + NG+ + I+ + G +++ K + L GY + Sbjct: 183 PSIAFRLVHDGN---KMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYISL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRFIKNFSLNKAIVAGYGSKLMVGRFPIAVLEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-----------SVLSKKMISSFHQD 348 HP K +R + I +IQKA++++ + S K Sbjct: 300 HPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQPKTEQIEIDLS 359 Query: 349 NAPKTHLPKYATSLTNTQE----------------------------KLFLQENRLSTND 380 A + PK +SL +E F +EN Sbjct: 360 YAFEEEKPKKPSSLNFDRETGTFFVEEPKNTFVDRIVDKSVENVENYSGFSEENTTYPEK 419 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI------------ 428 + D ++ VE++ + + Q + Sbjct: 420 TAKTVDKFGENVDNFVEKTVEKSEKKEFPIVDNMEKTNEEQADKSVEEDEQIYEEELTLH 479 Query: 429 --VDQHAAHERLIFEKMRQDFNSTKITSQTLLT-------PEIIDLLEGECALIMEHDED 479 D +E+ + + +++ + L + +I +H Sbjct: 480 PEFDFTQGNEKTLEQAIKKLETEKPVQRFPQLEYFGQMHGTYLFAQSSDGLYIIDQHAAQ 539 Query: 480 LHRLGIKA--ERFGPNAIAIRE--IPAILSKKNIPQ--------LLRDIIDEIIDSSTTY 527 R+ + E+ G + ++E +P +L N LL D + + Sbjct: 540 -ERIKYEYFREKIGEVSDDLQELLVPFVLDYPNSDALKLKEQKHLLEDAGIYLEEFGQNS 598 Query: 528 TL-------------QDRIENIL-------------------ATMACYGSIRSGRKMQSI 555 + + I ++ M+C SI++ + Sbjct: 599 FIVRAHPTWYPNGEEESIIREMIDMLLTTGNVSVKKFREATAIMMSCKRSIKANHYLNEA 658 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL+++ + N C HGRP I SD+E++F R Sbjct: 659 QARVLLKDLARCENPFNCPHGRPVLIHFTNSDMERMFKR 697 >gi|88658331|ref|YP_507679.1| MutL/HexB family DNA mismatch repair protein [Ehrlichia chaffeensis str. Arkansas] gi|123736381|sp|Q2GFV4|MUTL_EHRCR RecName: Full=DNA mismatch repair protein mutL gi|88599788|gb|ABD45257.1| DNA mismatch repair protein, MutL/HexB family [Ehrlichia chaffeensis str. Arkansas] Length = 673 Score = 425 bits (1092), Expect = e-116, Method: Composition-based stats. Identities = 217/673 (32%), Positives = 341/673 (50%), Gaps = 80/673 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + IN+IAAGE+IE P+ +KEL+ENS+DA+++ + I GG++ ++DNG Sbjct: 1 MSIILLDPRTINRIAAGEVIECPASVVKELVENSIDAKATAISITIERGGRNLIIVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A RH TSK+ D D + + + GFRGE L SI AV + ++S+ ++T Sbjct: 61 IGIKKEDMEIAFARHATSKLPDGDLTKVRSLGFRGEGLTSIAAVGKVKMVSKYRDSDTAW 120 Query: 120 QIAISG-EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + G EK + P A++ GT +EVRDLFF P RL FL++E+ E I D++ ++A+ Sbjct: 121 LMVFEGGEKTQELTPDALSCGTYIEVRDLFFATPNRLKFLRTEKAEVQSIIDMMNKLAMV 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V F+ +K Q +N + I + G +F N++ +N K +I L GY G Sbjct: 181 NHNVMFSLFVDNKQVFKYLTQQSNIDRLSEIKTL-GMEFCKNSLPVNVKEEQIQLSGYIG 239 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY---------PVVVLLLE 289 PT +RG ++ Y F+N R V D ++ +R AY++ I +Y P + Sbjct: 240 SPTLSRGKSSLIYTFVNSRPVYDNLLIGAVRYAYSDFIEKDKYPVVVLYLDIPCDQVDAN 299 Query: 290 IDPRQVDVNVHPAK-----------------------SYIRFRNPTIIRNFIIQSIQ--- 323 + P + +V K S F N + ++ S Sbjct: 300 VHPNKSEVRFQDKKLVYRTVVNAIKEVLSINLNTKLKSISEFENDHFVHASMVNSRNIGN 359 Query: 324 ---------------------KAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSL 362 + + K + T SF D+ T+ K Sbjct: 360 SVSSEFFKCFQNRKPLLNNDVQKYSSKNVETDDQSLLDTNVSFCTDSKMITNKLKEERVY 419 Query: 363 TNTQEKLFLQENRL--STNDLLPSDDPTYSEDNDPVEESEATH----------------- 403 N++E + ++++ S D+L + N+ ++ES + Sbjct: 420 ENSREHINKGDSKIEVSNFDILGEKKNFVNLANNLLQESPSIDSGKFNTSKKVPSDSLID 479 Query: 404 -YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 Y LG A QIH YIISQT D +VI+DQHAAHERL +E M+Q I Q LL PEI Sbjct: 480 TYPLGYALCQIHSRYIISQTQDSIVIIDQHAAHERLTYEYMKQVMAKEGIKRQILLIPEI 539 Query: 463 IDLLEGEC-ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 I++ L++E+ E L +LG+ E G ++ +RE+PA+ ++ L+ +I+D I+ Sbjct: 540 IEMNNHLDLELLVEYKEKLLKLGLLIEPLGNLSVIVREVPALFGSFDVKSLIINIVDSIM 599 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 + T L D+I++I T+ACY SIRSGRK++ EMN +LR ME +S QCNHGRPT++ Sbjct: 600 EVGDTLFLDDKIKDICGTIACYSSIRSGRKLKIEEMNAILRNMENTAHSGQCNHGRPTYV 659 Query: 582 KLKLSDIEKLFGR 594 +L L +I++LF R Sbjct: 660 ELNLVEIDRLFSR 672 >gi|239617975|ref|YP_002941297.1| DNA mismatch repair protein MutL [Kosmotoga olearia TBF 19.5.1] gi|259510021|sp|C5CF28|MUTL_KOSOT RecName: Full=DNA mismatch repair protein mutL gi|239506806|gb|ACR80293.1| DNA mismatch repair protein MutL [Kosmotoga olearia TBF 19.5.1] Length = 602 Score = 425 bits (1092), Expect = e-116, Method: Composition-based stats. Identities = 190/611 (31%), Positives = 312/611 (51%), Gaps = 26/611 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI +L +++I +IAAGE++ +KEL+EN+LDAE++ VE I GGK + +++DNG Sbjct: 1 MKIHELPQEVILKIAAGEVVTGCFSVVKELVENALDAEATTVEVEIKAGGKEYIRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM EE+ MA++ H TSKI +D I T+GFRGEAL +I +VS + + S P + G Sbjct: 61 IGMLPEELKMAIKPHTTSKIQCIEDLERILTYGFRGEALSTISSVSRMRISSMPDNADLG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I ISG KI + GT VEV DL F PAR FLKS++VE ++T++++R +A Sbjct: 121 LTIEISGGKIVREKSYIGPKGTTVEVYDLLFNTPARRKFLKSQRVEGRMVTEIVQRFILA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P F + Y + + ERI V E + +E+ E+++ I++ GY Sbjct: 181 IPDAGFKYIRDGELIYDL---TPAERILERIPVVFPELSTTDLLEVKEETSGISITGYIT 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P R N VF+NGR V+ + I Y E++ GR+P +L + ++P +DVN Sbjct: 238 FPERTRFNRLGEMVFVNGRYVRQPELNYAIEKGYGESLEKGRFPFAILFISVNPEMIDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 +HP K +RF NP+++ + I ++++ + G S + + S + + K Sbjct: 298 IHPQKLEVRFSNPSLVFDAIKRAVRNTLRTSGTSILRIEKRPFPGSSTNYSGIQQDTKKQ 357 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP---------------VEESEATH 403 + + P E++EA Sbjct: 358 ESDNPEKARGYGTHLRETHWEQRDHFEKRKVPLHYQPDNELLLNIERTASRRFEKTEAKE 417 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 + YI+++T DGL+IVDQHAAHERLI+EK+++ KI SQ LL+P + Sbjct: 418 TGEPRLFGVFGERYILAETKDGLLIVDQHAAHERLIYEKLKKAA---KIQSQKLLSPIRL 474 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 L + +L+ E D+ +LG + F + I + IP+ILS+ L +++DE+ Sbjct: 475 TLEDSRKSLLREKKNDVEKLGFQIS-FEGDRIFLTGIPSILSESVAVNALNEVLDELRLE 533 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + +++L+T+AC +I++G ++ E LL ++ + C HGRP + + Sbjct: 534 GLEEP-EKIFDHLLSTLACKSAIKTGDRLSESEAKELLEKLLEEEILF-CPHGRPVSMLI 591 Query: 584 KLSDIEKLFGR 594 + D+++ F R Sbjct: 592 RFKDLDRHFSR 602 >gi|304396957|ref|ZP_07378837.1| DNA mismatch repair protein MutL [Pantoea sp. aB] gi|304355753|gb|EFM20120.1| DNA mismatch repair protein MutL [Pantoea sp. aB] Length = 621 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 158/556 (28%), Positives = 259/556 (46%), Gaps = 38/556 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R+E I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIEVDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ MA+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 CGIVKAELSMALARHATSKIASLDDLEAIMSLGFRGEALASISSVSRLTLTSRTADQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +P A GT +EV DLF+ PAR F+++E+ E I +VIRR+A+ Sbjct: 121 WQAYAEGRDMTVTVKPAAHPCGTTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + S + S R++ + G F+ +A+ ++ + ++++L+G+ Sbjct: 181 ARFDVAISLSHNGKMMRQYRAVSEESQRERRLAAICGTTFMQHALRIDWQHDDLSLRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++NGR ++DK I IR A+ + + P VL LEIDP QVDV Sbjct: 241 ADPAGSRQVTDLQYCYVNGRMMRDKLINHAIRQAFQTQLQDDQQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA------- 350 NVHPAK +RF ++ +FI Q + A+ +T L + + Q Sbjct: 301 NVHPAKHEVRFHQSRLVHDFIYQGVVSALQAMAATTLPALQAEEPAPRWQPENRQAAGGN 360 Query: 351 -----------PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE-------- 391 K + +E ++ Q LL + S Sbjct: 361 HFAQPAASASETKPSSARETPPAWQNKENVYRQREGAVYQQLLKTPSGPPSSGTTPPLSA 420 Query: 392 ------DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 G +H ++ + + L+++ A L ++ Sbjct: 421 REPAPRPAAKPSPLAPHAQSFGRVLTILHNHFALLEQDQTLMLMSLPVAARWLKLAQL-- 478 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 + + Q LL P + + E E+ L+++GI + G + + +R +P L Sbjct: 479 EPGEEGLKPQPLLIPVRLKIALNERQAAKENSSLLNQMGIDLQLDGDH-VTLRAVPLPLR 537 Query: 506 KKNIPQLLRDIIDEII 521 +N+ L+ +++ + Sbjct: 538 TQNLQILIPELLGYLA 553 >gi|260774599|ref|ZP_05883511.1| DNA mismatch repair protein MutL [Vibrio metschnikovii CIP 69.14] gi|260610393|gb|EEX35600.1| DNA mismatch repair protein MutL [Vibrio metschnikovii CIP 69.14] Length = 637 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 167/614 (27%), Positives = 276/614 (44%), Gaps = 50/614 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R+E I GG ++ DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIEIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LT+ SRP Sbjct: 61 SGINKDELGLALSRHATSKIQTLDDLEAIISLGFRGEALASISSVSRLTITSRPATQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPSAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS T + S+ R++ V G F+ + +++ + L G+ Sbjct: 181 SRFDVSLTLRHNGKIIRQYRAASSERQEENRLAAVCGASFVKHMLKIELAHQGLRLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ + VL +E+DP VDV Sbjct: 241 TTPQGARQQSDLQYCYVNGRMMRDKLINHAIRQSYESSLRPDQCATYVLFIELDPHLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ---------- 347 NVHPAK +RF ++ +FI Q++ A+ + L++ S+ Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSDALADSEYIETPELNQAAFSAPVPTHMSNERSTD 360 Query: 348 -----------------------------DNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 A +H T+ + E + Sbjct: 361 PDQPARNLSDKDGYSRQYLTTERPLQAVIQEAKASHSWNRPTTAKPRSSAPVMAEQSQAY 420 Query: 379 NDLLPSDDPTYSEDN-----DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 L+ + S DN + +LG A A + Y++ T G V++ Sbjct: 421 QQLMKVSEAPVSIDNRLSTTEKSSTLSLIVTKLGKAIAVVDGQYLLMTTDQGCVLLALTK 480 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 A E + ++ + + SQ LL P + + E + E L RLGI Sbjct: 481 AVEWRVRGQL--NSQEEPLKSQPLLVPLSVKVSNEEIRGFELYRELLERLGIHLVTRSHQ 538 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQ 553 + + +P L ++N+ L+ D++ + + L ++NI+ ++ I Sbjct: 539 TVMVMGVPQPLRQQNLQLLIPDLLSYLALHGASGVLTLNVDNIVTWLSQRVLIEKNDY-T 597 Query: 554 SIEMNRLLREMEKN 567 E +L+ E+E+ Sbjct: 598 LSEAIQLIAELEQL 611 >gi|227484986|ref|ZP_03915302.1| DNA mismatch repair protein MutL [Anaerococcus lactolyticus ATCC 51172] gi|227236983|gb|EEI86998.1| DNA mismatch repair protein MutL [Anaerococcus lactolyticus ATCC 51172] Length = 587 Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats. Identities = 181/601 (30%), Positives = 306/601 (50%), Gaps = 21/601 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+KL ++ + +IAAGE+IE P IKEL+ENS+DA S + I GGK++ ++TD+G Sbjct: 1 MAIKKLDKETVEKIAAGEVIESPLSIIKELVENSVDAGSKNITVEIKNGGKTYIRVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++I +A ++H TSKI+ DD I + GFRGEALPSI +VS + +S+ + G Sbjct: 61 SGIAKDDIELAFEKHATSKITKFDDLFKISSLGFRGEALPSIASVSKVVAISKTQDADVG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ +SG ++ + +A N GT + V DLF+ +PAR FLKS+ E+N IT ++ AI Sbjct: 121 TKLDLSG-RVKVKKSIATNKGTSIIVEDLFYNMPARRKFLKSDIAESNKITKLMYAFAIG 179 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 Y VSF + +++ N T+ + +IS ++ N +EL + + G G Sbjct: 180 YKDVSFKYIKDDRIQFQSN---TSLDLKFKISDLLDNLLEENLLELKATNTSYRIDGEIG 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PT+ RGN + Y+F+N R ++D+ I TI Y IP GR+PV + + DP+ +DVN Sbjct: 237 LPTYYRGNRSMQYIFVNDRLIEDEEITKTIERQYIGLIPQGRFPVFFIFIYTDPKNIDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 +HP K +++ + I S++ + K S + K + K L KY Sbjct: 297 IHPNKKLVKYTYEDELVELINDSVKNLLKSKQAINSIDIKDKKQNEILDFTDYKAVLDKY 356 Query: 359 ATS--LTNTQEKLFLQENRLSTNDLLPSDDPT---YSEDNDPVEESEATHYQLGIACAQI 413 + + L +EK + N + +N +D + Y+ + E+S + ++ I Sbjct: 357 SPAEMLIREEEKPY---NSIESNQDFFNDKISIDLYTNEEKIREDSFFSDIEVPSYKTSI 413 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 + Y I + + + I+D A E++ + D+NS KI+ Q +L P I+L + + Sbjct: 414 FRRYSIFEDKEKIYILDHRKAEEKIKMSEYINDYNSNKISRQLVLNPIKINLNKIDIGRY 473 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 + + ++LG E ++ IREIP I +I+D L + Sbjct: 474 EQKQDLFNKLGFDIELISDKSVIIREIPIIFDIPENNNFFYEILDF---DDNENILFKNL 530 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 ++ + S R G + E L +++ K + + G+PT I L+ D+EK F Sbjct: 531 RKLVKNI----SFRKGNTINKDEAIELYKKLMKEEDPYRTYDGKPTIITLEDKDLEKYFE 586 Query: 594 R 594 R Sbjct: 587 R 587 >gi|300871537|ref|YP_003786410.1| DNA mismatch repair protein [Brachyspira pilosicoli 95/1000] gi|300689238|gb|ADK31909.1| DNA mismatch repair protein [Brachyspira pilosicoli 95/1000] Length = 605 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 185/608 (30%), Positives = 306/608 (50%), Gaps = 17/608 (2%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 MK I KL + + N+IAAGEIIERP+ +KEL+EN++D+ + +E + G + D Sbjct: 1 MKKSIMKLPKSVANRIAAGEIIERPASMLKELLENAVDSGADNIEVSVEEAGIKTMIVED 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG G+ EE+P+A+ H TSKI +D NI+T GFRGEAL SIG V++L ++S+ Sbjct: 61 NGSGIAFEELPLAITHHATSKIYSIEDLDNIYTLGFRGEALASIGDVTNLEIVSKSIDEK 120 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 TG +I + KI +P A GT + ++LFF IPAR FLK E L+ +V A Sbjct: 121 TGGKIVVEAGKILEHKPYASVNGTKITAKNLFFNIPARYKFLKHISREFYLVKEVFDMEA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQ-VIGEDFINNAVELNEKSNEITLQG 235 + P ++ +N N +RI + + +N +ELN + N+I + G Sbjct: 181 LVQPNITMKLYNNGKL---VNSYLKVDNLKDRIENYLNDSNIFSNLIELNIEKNDINIYG 237 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 ++ ++F+N R ++++ I I+ AY+ +IP RYP L + +D +V Sbjct: 238 LFSNSKISQSMRKNNFIFLNNRPIENRVIAYAIKNAYSNSIPKERYPFFFLYINVDTNKV 297 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHP+K +R +N I I +I IN +S + + ++ Sbjct: 298 DVNVHPSKKEVRIKNERDISGIIYNAIYNNINSVNNFSSVNIEVDIDKDITPTFPIQSSN 357 Query: 356 PKYATSLT------NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ--LG 407 + S N N L +N + +N+ +E + Sbjct: 358 ITASNSANNFNHTENNYSHTVFNNNELVSNVSYDNVFNRDDVNNNNLEPQKNNIEFGEYV 417 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 A Q+ +YIIS+ + + I+DQHAA+ERL +E++ + S K+ + LL P I+ + Sbjct: 418 KAVGQVFSSYIISERGNEMYIIDQHAAYERLNYERIYKTLMSGKLEYEKLLIPCEIEYRD 477 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN-IPQLLRDIIDEIIDSSTT 526 E ++ E + +GIK E N+I I E+P + K I ++++DI+D I + Sbjct: 478 YEIDILNSSKEQIESIGIKFESNSKNSIIIDEVPIYIPKNQKIDKIIKDILDIYISKESN 537 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 +L+ I++ +T++C S ++G K+ +M LL +E+ + C HGRP ++L Sbjct: 538 NSLEKLIKHTCSTISCKYSPKAGDKLSLNDMQTLLDLLEEENILTNCPHGRPFVLRLSKD 597 Query: 587 DIEKLFGR 594 ++K F R Sbjct: 598 YLDKKFFR 605 >gi|332882537|ref|ZP_08450150.1| DNA mismatch repair protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679509|gb|EGJ52493.1| DNA mismatch repair protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 612 Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 155/614 (25%), Positives = 287/614 (46%), Gaps = 33/614 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ A+KEL+EN++DA+++ ++ +I GK+ Q+ DNG G Sbjct: 5 IKLLPDHVANQIAAGEVIQRPASAVKELMENAIDAKATVIKLLIKEAGKTLVQVIDNGIG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M++ + ++ +RH TSKI ++D + T GFRGEAL SI A++H+ + ++ ++ G + Sbjct: 65 MSTTDARLSFERHATSKIQRAEDLFQLQTKGFRGEALASIAAIAHIEMQTKRQEDELGTE 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G KI+ P N GT + +++LFF IPAR NFLKS+ VE I D R+A+A+P Sbjct: 125 IHIEGSKITRQEPCVCNNGTSIAMKNLFFNIPARRNFLKSDSVEMRHILDEFHRVALAHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE-ITLQGYTGI 239 + F + Y + NF +RI + G V + + + + G+ Sbjct: 185 SIQFYLYNNGNELYNLPP----ANFRQRIVHLFGGRTNEKLVPIISEDTPVVKISGFIVK 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + + ++ +N R V+++++ I AY I + P + LE+DP +D+N+ Sbjct: 241 PEYLPKSKQLQFLMVNHRFVKNQYLNHAITAAYEGLIRPDQKPEFFICLEVDPATIDINI 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ I+F I + +I+ ++ + I+ + +K +F K P + Sbjct: 301 HPTKTEIKFEEEHSIYALLKSAIKHSLGQFSIAPTLDFTKD--PTFDIPYQYKDKEPSFP 358 Query: 360 TSLTNTQEKLF-------------------LQENRLSTNDLLPSDDPTYSEDNDPVEE-- 398 + F Q+ L + + + VE Sbjct: 359 KIEVDPDFNPFKMETPAVKSSSGGGGNSFSFQKKTAQWESLYTGIESAINTTAEAVESTL 418 Query: 399 -SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 G + + Y+I+ L+I++ + AH+R+++E + T SQ L Sbjct: 419 FEAEPAKPQGKKIISLAKKYLITTLGGELIIINSNRAHQRVLYEGFMKSLERTHTASQQL 478 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 + P + E +I + +G + I + IP L+ IP + ++I Sbjct: 479 MFPYELSFSAHELQVIAQLQTLFESIGFMF-AIEDDKIVLSGIPLHLTDSQIPNIFNELI 537 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 + I+ T + E T++ +I++G+ + E L+ + G+ Sbjct: 538 QQHIEL-LPTTENTQKEAFAKTLSKSLAIKTGQALSEEEQESLINNLFSCQEVLISPFGK 596 Query: 578 PTFIKLKLSDIEKL 591 + L +++I++L Sbjct: 597 RIYYNLSVNEIDRL 610 >gi|298530256|ref|ZP_07017658.1| DNA mismatch repair protein MutL [Desulfonatronospira thiodismutans ASO3-1] gi|298509630|gb|EFI33534.1| DNA mismatch repair protein MutL [Desulfonatronospira thiodismutans ASO3-1] Length = 580 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 181/595 (30%), Positives = 293/595 (49%), Gaps = 27/595 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + NQIAAGE++ERPS +KEL+ENSLDA + V+ + GG++ ++ D+G G Sbjct: 9 IKVLPPGLQNQIAAGEVVERPSSVVKELVENSLDAGAGSVQVYLEQGGQALVEVVDDGAG 68 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M ++ +AV RH TSKI D ++ +FGFRGEALPSI +VS L L S + G+ Sbjct: 69 MLPADMALAVTRHATSKIFSMQDLVSVQSFGFRGEALPSIASVSRLRLSSCVQGRDEGSF 128 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I P AM+PGT V+V++L IPARL FLK++ E ++ R+A+A Sbjct: 129 LEILYGDHLEEGPEAMDPGTRVKVQNLLANIPARLKFLKTKNTEAKKCSENFIRLALANL 188 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V + ++ N N ER+S+V E + E+ + + G P Sbjct: 189 EVDLELYSEGR---SLHRFFANENLKERLSRVWPEQLCRDLKEVELDQGDFRVHGVASAP 245 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + ++N R V+DK ++S ++ AY + YP V+ LEI P +VDVNVH Sbjct: 246 ENAQARGERMLFYVNNRAVKDKTLISALKQAYKGRLLSREYPQAVIFLEIPPEEVDVNVH 305 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAKS +RFRN + + + +++ K ++K + + D A + P+Y Sbjct: 306 PAKSEVRFRNEKHVFSLVSRAVGKVLDKNY------FQVPEMPAEEVDVAGRADSPRYGP 359 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 T+ ++ + D + PV + Q+ NY++ Sbjct: 360 GPGETRPEMPVFREDFRHETAPDYGDRPPKKPAPPVHAPD----MGLSYLGQVENNYLVF 415 Query: 421 QTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + G L++VDQH AHER++FE ++ + S+ L P I+L + E L+ E Sbjct: 416 LNSSGRLLVVDQHGAHERVVFEDLKSR--QGSVQSRMLAMPMQIELHQAEKNLLEEIWSM 473 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L LG E + + ++ +P IL+ + LR ++++ ++ IL Sbjct: 474 LRSLGFVLELQDESLLQVKGLPDILTSGEGLEALRSMLED---------KARDMDGILIA 524 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MAC SI+SG M E L ++ + + C HGRP + L ++E+LF R Sbjct: 525 MACRTSIKSGSSMTRDEALSLAHKLMQCKEMNFCPHGRPICMDLGGKELERLFKR 579 >gi|251780192|ref|ZP_04823112.1| DNA mismatch repair protein MutL [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084507|gb|EES50397.1| DNA mismatch repair protein MutL [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 676 Score = 422 bits (1084), Expect = e-115, Method: Composition-based stats. Identities = 167/673 (24%), Positives = 287/673 (42%), Gaps = 81/673 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L+E N+IAAGE++ERP+ +KEL+EN++DA S + I GG S +I D+G Sbjct: 3 RINILNEDTANKIAAGEVVERPASVVKELVENAIDANSKNILIEIEEGGSSLIRIIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+I A H TSKI S+D +I+T GFRGEALPSI +V+ + L ++ G Sbjct: 63 GIYKEDIEKAFLPHATSKIKESEDIYSINTLGFRGEALPSIASVARVNLKTKQETEECGY 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G K S V +N GTI+EVRDLFF +PAR FLK+ E++LI D+I R+A++ Sbjct: 123 EITIEGGKFSEVTECGVNKGTIMEVRDLFFNVPARKKFLKTTSKESSLINDIITRIALSN 182 Query: 180 PKVSFTFSTIK----------SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN 229 P +SF + + + + D + ++ Sbjct: 183 PNISFKLFNNGKKIVHTYGNGNMKDVIRTIYGKSIVENVLYFEDTSDIATIYGYVGKEDI 242 Query: 230 EITLQGYTGIPTFNRGNANQ------------------------------FYVFINGRTV 259 + I +R N+ Y+ +N Sbjct: 243 ARGSRNNQSIFVNSRYIKNRSLGIAVEQAFKSFSTVSKFPFFILFIEIYPEYIDVNIHPT 302 Query: 260 QD-------KFILSTIRTAYAETIPLGRYPVVVLLLE----------IDPRQVDVNVHPA 302 + +FI I A ++ + + E ++ ++ + Sbjct: 303 KSEVKFNDERFIFKKIFGAVHTSLKEEVFSTFSIPEEENEATSKNSNLNIEEITFKIEEE 362 Query: 303 KSYIRFRNPTIIRNFIIQS-----IQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 + ++F +++ I + I K I + + + + + + K + Sbjct: 363 QEKVKFNTNHLLQKNICSTLGDKGINKHIYDEKHKIDTDIHNNIPLNVNLPVDLKCDHIR 422 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN----------------DPVEESEA 401 N K + EN + + + E++ + + + Sbjct: 423 LEEDNNNNSNKQIISENNEAKYETPYTSKSNQYENSCKCETDNESKLNVIKTSDLAKEKI 482 Query: 402 THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 + Q ++ YI+ + L ++DQHAAHE+++FEK D N I Q L+ P Sbjct: 483 PKFPAIKIIGQYNKTYILGEYAGTLYMIDQHAAHEKIMFEKYLNDINCGDIIIQPLMIPT 542 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 +IDL + + E+ + G E FG +IA++E+P L K L +I+D + Sbjct: 543 VIDLSMDDYSYFEENKDVFKEAGFTIEEFGGTSIALKEVPYFLGKLKPKNLFLEILDNLK 602 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 + + T + + I AT AC +++ + +EM +L+ E+ + C HGRPT I Sbjct: 603 NLGSGKTTEVKYNAI-ATKACKSAVKGNDSLDELEMVKLIEELRYIDDPFHCPHGRPTII 661 Query: 582 KLKLSDIEKLFGR 594 + +DI+K F R Sbjct: 662 QFTSTDIDKKFRR 674 >gi|270264996|ref|ZP_06193259.1| DNA mismatch repair protein MutL [Serratia odorifera 4Rx13] gi|270040930|gb|EFA14031.1| DNA mismatch repair protein MutL [Serratia odorifera 4Rx13] Length = 624 Score = 422 bits (1084), Expect = e-115, Method: Composition-based stats. Identities = 160/614 (26%), Positives = 282/614 (45%), Gaps = 56/614 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A+ RH TSKIS DD I + GFRGEAL SI +VS LTL SR + + Sbjct: 61 CGIGKEDLALALARHATSKISTLDDLEAIVSLGFRGEALASISSVSRLTLTSRTAEQSEA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q ++ +V+P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDQAVTVKPAAHPIGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + R+ + G F+ +A+ ++ + ++T++G+ Sbjct: 181 ARFDVAINLSHNGKLIRQYRAAKDESQHERRLGSICGPAFLQHALNISWQHGDLTIRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R Y ++N R ++D+ I IR AY + + + P VL LE+DP QVDV Sbjct: 241 ADPAGARQLGEMQYCYVNSRMMRDRLINHAIRQAYQDQLKDEQQPAYVLYLEVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------- 346 NVHPAK +RF ++ +FI Q++ + + G + S+ ++ Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTTVLQQVGTAPLSLADEQDQEPAPAWQPENRVAAG 360 Query: 347 ----QDNAPKTHLPKYATSLTNTQE--------------------KLFLQENRLSTNDLL 382 AP+ + A ++ KL + Sbjct: 361 GNHFSQPAPRREVQPAAPAVAREPAPQPAYHAGSGYQKREGELYGKLLQAAPAAEPHQET 420 Query: 383 PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 P + + + G Y + ++ L++++ A L + Sbjct: 421 PKQPLFPPVKIERETPLAGSQHSFGRVLMIHPPCYALIESRQQLMLLNLPVAERWLRQAQ 480 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 + + + Q LL P + L + E A + H L ++G+ + + +R +P Sbjct: 481 L--SPSEEGLRPQPLLIPIKLTLNKNEVAACVRHQSLLVKMGLDLQS-DHGRVTLRAVPL 537 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSGRKMQSIEMNRL 560 L ++N+ +L+ +++ + + +LAT +A + GS + + + +L Sbjct: 538 PLRQQNLQKLIPELLGYLAEHQEMSP------AVLATWIARHLGS--EHEQWNTSQAIQL 589 Query: 561 LREMEKNPNSSQCN 574 L ++E+ C Sbjct: 590 LTDVERL-----CP 598 >gi|302332902|gb|ADL23095.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus JKD6159] Length = 669 Score = 421 bits (1083), Expect = e-115, Method: Composition-based stats. Identities = 150/670 (22%), Positives = 285/670 (42%), Gaps = 82/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----KKMISSFHQ------D 348 HP K +R + I+ IQ+A + + + L K++ SF Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENR--------------LSTNDLLPSDDPTYSEDND 394 + + S + K F+ EN+ ++ D S N+ Sbjct: 359 RQNTENNQEKTFSSEESNSKPFMAENQNDEIVIKEDSYNPFVTKTSESLIADDESSGYNN 418 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 E+ + + ++ Q + + + + A+ + ++ + Sbjct: 419 TREKDKDYFKKQQEILQEMDQTFDSN-DDTSVQNYENKASDDYYDVNDIKGTKSKDPKRR 477 Query: 455 QTLL------TPEIIDLLEGECALIMEHDEDLHRLGIKA--ERFGPNAIAIRE--IPAIL 504 + I +++ R+ + ++ G +++ IP Sbjct: 478 IPYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTF 537 Query: 505 SKKNIPQLLRD-----------IIDE-----------------------------IIDSS 524 QL+ D +++ +I Sbjct: 538 HFSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEE 597 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 ++ E++ M+C SI++ +Q EM+ L+ ++ + + C HGRP I Sbjct: 598 KKVDIKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFS 657 Query: 585 LSDIEKLFGR 594 ++EKLF R Sbjct: 658 KYELEKLFKR 667 >gi|262038761|ref|ZP_06012118.1| DNA mismatch repair protein MutL [Leptotrichia goodfellowii F0264] gi|261747219|gb|EEY34701.1| DNA mismatch repair protein MutL [Leptotrichia goodfellowii F0264] Length = 648 Score = 421 bits (1083), Expect = e-115, Method: Composition-based stats. Identities = 177/660 (26%), Positives = 307/660 (46%), Gaps = 85/660 (12%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L E + N IAAGE++E P+ IKE+IENSLDA+++ ++ + GG +I DNG G Sbjct: 4 IKILDESVSNIIAAGEVVENPASMIKEMIENSLDAKATIIKIEVFKGGMD-VKINDNGIG 62 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M ++ ++++RH TSKIS DD N++T+GFRGEAL SI AVS LT+ +R ++TG + Sbjct: 63 MDKDDTLLSIERHATSKISTKDDVFNLNTYGFRGEALASIAAVSKLTITTRSENSSTGYK 122 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + V+ N GT +EVRDLF+ PAR FL+ E E N I D++ + A+A Sbjct: 123 IGSYGGVVRKFEEVSRNVGTEIEVRDLFYNTPARKKFLRKESTEYNKIKDIVLKEALANS 182 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+FT + ++ I ++ G+ + N + GY G Sbjct: 183 DVAFTLEFDGKQ----SVNTSGKGIENAILELFGKSVLRNLKKFEY--------GYLGNV 230 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + + ++N R V+ I + Y + G+YP V++ +IDP+++DVNVH Sbjct: 231 EILRSSKDYIFTYVNKRYVKSNTIERAVIDGYYTKLMKGKYPFVIIFFDIDPKEIDVNVH 290 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMISSFHQDNA------- 350 P+K ++F N I+ I +I + +++G + L KK I+ +++ Sbjct: 291 PSKKIVKFSNDKIVYKQIKDAIDEYFYQSDREGWQPNIDLLKKSINVENKEEKIKDLFSD 350 Query: 351 -----------------------PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 K + + E ++EN+ + L D Sbjct: 351 EVIKGESQKFFSFETHDGDFSAGNKIQERTLEEIIGSNAENNEIKENKEIESSRLLHDTD 410 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF------- 440 Y + E +I + I D V + E+ + Sbjct: 411 DYIIEEMNKNEKVFEKSDKIKEELEIKEESIRETGNDYKVGTFEKHTGEQFTYDVLGQIF 470 Query: 441 --------------------------EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 E++++ F+ + SQ LL P+ +++ E E ++I Sbjct: 471 DTYILVRKNNELEIYDQHIIHERILYEELKEKFSGKEHKSQHLLLPQKMEVSEVEKSIIF 530 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 ++ E + G + F N I R +PA + +I + ++ ++ + S ++D E Sbjct: 531 DNIEVFNEFGFDIDEFSNNEIVFRAVPAFDFRDSIQNVFLKLLSDLKNESE---IKDLRE 587 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 NI+ +M+C G++++G+K+ EM ++R + + C HGRP +KL D++K+FGR Sbjct: 588 NIIISMSCKGAVKAGQKLNMNEMQNMVRRLHEVGK-YTCPHGRPIIVKLTKDDLDKMFGR 646 >gi|281355326|ref|ZP_06241820.1| DNA mismatch repair protein MutL [Victivallis vadensis ATCC BAA-548] gi|281318206|gb|EFB02226.1| DNA mismatch repair protein MutL [Victivallis vadensis ATCC BAA-548] Length = 663 Score = 421 bits (1083), Expect = e-115, Method: Composition-based stats. Identities = 172/666 (25%), Positives = 297/666 (44%), Gaps = 79/666 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ +SE++ N+IAAGE+IERP+ +KEL+EN++DA + + I G + D+G Sbjct: 3 KIKVMSEQLSNRIAAGEVIERPASVVKELVENAIDAGARHIRIEIEKAGSRLISVEDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ + ++ H TSKI +D I T GFRGEALPSI ++S ++ +R G Sbjct: 63 GMDGDDALLCIEPHGTSKIFTEEDIDRITTLGFRGEALPSIASISRFSIQTRTSDMLEGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G ++ P GT+++VRDLFF PAR FLK+ E + I +++ MA+ Sbjct: 123 RVRVEGGRLLEAAPAGCPVGTVMQVRDLFFNTPARRKFLKAPATEAHHIEEMVLSMALPR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 +V F + ST RI + G F + ++ N+I + G+ Sbjct: 183 HEVGFELRMDGRLVFNSPASSTA---EARIREFFGRQFADAMWPVDHAENDIRVTGFVAS 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F R + + FINGR V+ + IR YA GR+P V+L LE+ P +VDVNV Sbjct: 240 PGFTRNSRKEQRTFINGRAVESPTLYRGIREGYATLNEPGRFPPVILYLEMPPEEVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------------- 328 HPAK +RF++ I + ++ KA+ + Sbjct: 300 HPAKREVRFKHEYAISRAVTAAVSKALKRSREVDYLNDEAENLPLSGQVPLHLVLDSAKI 359 Query: 329 ---------------KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE 373 + + K S + +P +P A+ ++E Sbjct: 360 SYTVRDTEQQEFAIPSSVVPPEPPAVKEESPVEPEPSPSRSVPAIASPPVPRFSPSPVRE 419 Query: 374 NRLSTNDLLPS------------------------DDPTYSEDNDPVEESEATHYQLGIA 409 S + ++ Sbjct: 420 LEESPEAAATESAPDAELPPGAKPLFLNDPPPEAPQPREVPPEKHIYPDAPFNGDWPTEI 479 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 + YI+ GLV++DQHAAHER++FE + + T + +Q LL P++++L Sbjct: 480 LGVLDDTYILCAGRTGLVMIDQHAAHERIMFEHLLKA-ARTGVPAQPLLLPQLLELPATM 538 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS-KKNIPQLLRDIIDEIIDSSTTYT 528 +L++ + + LG E G ++ + +P + + + +L+ D++ E++D+ Sbjct: 539 SSLLLRNRKVFEVLGFDIEPMGSTSVMLNALPMEMPTHRPLNELIPDMLQELLDN-MANK 597 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 + +E + A AC+ +I++ ++ LLR++ + + C HGRPT + + +I Sbjct: 598 MPVELEYV-ARAACHAAIKAHDRLSPEGARELLRQLGECRQGTLCPHGRPTMVTVTFKEI 656 Query: 589 EKLFGR 594 EK FGR Sbjct: 657 EKRFGR 662 >gi|323946018|gb|EGB42055.1| DNA mismatch repair protein MutL [Escherichia coli H120] Length = 615 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E + I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFSHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYSPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|293476481|ref|ZP_06664889.1| DNA mismatch repair protein mutL [Escherichia coli B088] gi|291320934|gb|EFE60376.1| DNA mismatch repair protein mutL [Escherichia coli B088] Length = 616 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 2 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 61 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 62 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 121 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E + I ++IRR+A+ Sbjct: 122 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFSHIDEIIRRIAL 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 182 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 241 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 242 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 301 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 302 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 361 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y+ + + + + ++ LL + P Sbjct: 362 NHFAEPAAREPVAPRYSPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 421 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 422 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 479 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 480 VCAQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 538 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 539 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 588 Query: 570 SSQCN 574 C Sbjct: 589 ---CP 590 >gi|46445773|ref|YP_007138.1| putative methyl-directed mismatch repair (MMR) protein, mutL [Candidatus Protochlamydia amoebophila UWE25] gi|46399414|emb|CAF22863.1| putative methyl-directed mismatch repair (MMR) protein, mutL [Candidatus Protochlamydia amoebophila UWE25] Length = 652 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 174/636 (27%), Positives = 292/636 (45%), Gaps = 45/636 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L+E+ INQIAAGE+IE P+ +KEL+ENS+DA ++ + I GGG+ +I+DNG Sbjct: 6 KIHVLTEQTINQIAAGEVIENPASVVKELVENSMDAGATEICVEIQGGGRQLIRISDNGC 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT-- 117 GM+ ++ + ++RH TSKI DD NI T GFRGEA+PSI ++S +L++ P + Sbjct: 66 GMSEDDALLCLERHATSKIKNVDDIENILTMGFRGEAIPSIASISKFSLLTTPQSGVSSI 125 Query: 118 -----GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 G+ + G +I S +PGT +EV+ LFF +P R F +S +T I ++ Sbjct: 126 DKLMQGSLTIVEGGRIQSHGKATRSPGTTIEVKSLFFNVPVRRKFQRSPNYDTQEIVKIL 185 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQS----TNGNFPERISQVIGEDFINNAVELNEKS 228 +++AYP ++F + + + KM S ++I ++G++F ++ L S Sbjct: 186 TNLSLAYPNIAFELISDQKSILKMPLISIDINHQQQLLKKIETLLGKEFSHSLCPLTFSS 245 Query: 229 NEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL 288 ++GY G+P+ ++ N Y+FIN R V I IR Y + RYPV +L L Sbjct: 246 PPYEIEGYIGLPSIHKPNRTSQYLFINRRAVYSPLIGVAIREGYGTMLGTNRYPVFILHL 305 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS---------------- 332 + DVNVHP K +R R ++ +I ++QKA+ ++ Sbjct: 306 RLPGSLFDVNVHPQKKEVRLRQEQKLKETLINAVQKALRQENPHQAFSEMANQVQNETCV 365 Query: 333 -TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 S S + +++ K++TS+ + EN N+ + Sbjct: 366 YPWSAPSFQTPFQVKEESWEFKPNHKFSTSIDENPTFIKNIENLELKNETFNPSSFIQTR 425 Query: 392 DNDPVEESEATHYQ--------------LGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 EE + Q+ + +Q +GL+++DQ A+ R Sbjct: 426 SLPTKEEPTFFISHQQKAPKVLQTLTGYCLLDACQVKGTFNSNQELNGLLLLDQKQAYSR 485 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 + +EK+ + + Q L+ P E L+ H E L++LG FG + Sbjct: 486 IKYEKLLFNLKGKQ-AIQQLIVPLTFQFSIPETTLLKTHLESLNQLGFSMREFGNQTFVL 544 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 P+I+S++ I L ++I ++ + LQ +I LA A S ++ E Sbjct: 545 DAFPSIMSEQEIETCLLEMIQDLSTLQQSQQLQIKITEKLALTASRSSFSKNIQLSIDEG 604 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 L+ ++ G P F KL ++ LF Sbjct: 605 QGLVDQLFMCDMPYLSPSGSPIFAYFKLQELADLFR 640 >gi|320193550|gb|EFW68187.1| DNA mismatch repair protein MutL [Escherichia coli WV_060327] Length = 615 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 162/605 (26%), Positives = 270/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKMVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 344 ----------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPLYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLELDGNISLLALPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI +F + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDF-QFDAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|242237985|ref|YP_002986166.1| DNA mismatch repair protein [Dickeya dadantii Ech703] gi|242130042|gb|ACS84344.1| DNA mismatch repair protein MutL [Dickeya dadantii Ech703] Length = 629 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 170/632 (26%), Positives = 282/632 (44%), Gaps = 63/632 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERPS +KEL+ENSLDA +++++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPSSVVKELVENSLDAGATKIDIEIERGGARLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIGKADLTLALARHATSKIATLDDLEAIVSLGFRGEALASISSVSRLTLTSRTADQAEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGREMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFMHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+F + + R+ + G F+ +A+ ++ + ++ + G+ Sbjct: 181 ARFDVAFNLHHNGKLVRQYRAATDPSQQERRLGSICGAAFLQHALAVSWQHGDLNIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R Y ++N R ++D+ + IR AY + + + P VL L++DP QVDV Sbjct: 241 ADPAGSRQLPEMQYCYVNQRMMRDRLLNHAIRQAYQDQLHGEQQPAYVLYLDVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINK----------------------------- 328 NVHPAK +RF ++ +FI Q++ + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVMSVLQQASSPSLNSGSSALSEGHWQQENRQAAGEN 360 Query: 329 ----------KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 G S S + S+ QD + + L + S Sbjct: 361 HFARPAAASLNGRSPSGNAKEPQAFSWQQDGGYQKRQGELYQQLLRPAAPPREAGHASSV 420 Query: 379 NDLLPSDDPTYSEDNDPVEES-EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 PS PV E E LG A + Y + + G+ ++ AA Sbjct: 421 QLTGPSSSSAPETLPLPVSEPLEGHALGLGRVLAIHNGRYALVEHRQGIALLSLTAAERY 480 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 + ++ + + Q LL P+ + L + E + L R GI+ P + + Sbjct: 481 VHQAQL--TPSEEGLRPQPLLIPQRLSLEKAERDELRRQQPLLTRFGIEV-ALEPTSATL 537 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI-RSGRKMQSIE 556 + +P L ++N+ L+ D++ + D + I A +A + R+ + Sbjct: 538 KAVPLPLRQQNLQNLISDLLGYLTDYGHAEP-----DTIAAWIASRLQVERA--DWSIAQ 590 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 +LL E+E+ C P +K S++ Sbjct: 591 AVQLLAEVERL-----C----PVLVKTPPSEL 613 >gi|317049758|ref|YP_004117406.1| DNA mismatch repair protein MutL [Pantoea sp. At-9b] gi|316951375|gb|ADU70850.1| DNA mismatch repair protein MutL [Pantoea sp. At-9b] Length = 613 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 171/605 (28%), Positives = 278/605 (45%), Gaps = 49/605 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDVDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ MA+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 CGIAKDELAMALARHATSKIASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTEAQTEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E I +VIRR+A+ Sbjct: 121 WQAYAEGRDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + S + S + R+ + G F+ +A+ ++ + +++ L+G+ Sbjct: 181 ARFDVAISLSHNGKLMRQYRGVSQDAQRERRLGAICGTTFMQHALRIDWQHDDLALRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++NGR ++DK I IR AY + + P VL LEIDP QVDV Sbjct: 241 ADPAGSRQVTDLQYCYVNGRMMRDKLINHAIRQAYQTQLGDEQQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS----TSSVLSKKMISSFHQDNAPKT 353 NVHPAK +RF ++ +FI Q + A+ + + ++ A Sbjct: 301 NVHPAKHEVRFHQSRLVHDFIWQGVMSALQASRAAELPLAHAEEPAPQWQPENRQAAGSN 360 Query: 354 HLPKYATSLT---------NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE---- 400 H + AT+L QE + + L+ + + P + + Sbjct: 361 HFSQPATTLRRSGVSGGGWQPQEPTYSAREGAAYQKLMQTPVSAPAPVKTPADPAPVRKP 420 Query: 401 -------ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 A G + I Q Y + + D L ++ A L +++ + Sbjct: 421 ESATPLAAHAQSFGRVLSVIRQCYALLERGDTLQLLSLPVAARWLKQAQLQP--GEEGLK 478 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 Q LL P + + E A+I L +GI +R G + + +R +P L +N+ L+ Sbjct: 479 PQPLLIPVRLKVAAEEMAVIGRQSALLTAMGIDLQREGQH-VTLRAVPLPLRTQNLQILI 537 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACY----GSIRSGRKMQSIEMNRLLREMEKNPN 569 +++ + + +A + + LL E+E+ Sbjct: 538 PELLGYLARQQEVSAF-----ALAQWLARRDDAEAA-----HWNHSQAIALLTELERL-- 585 Query: 570 SSQCN 574 C Sbjct: 586 ---CP 587 >gi|306820529|ref|ZP_07454162.1| DNA mismatch repair protein MutL [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551443|gb|EFM39401.1| DNA mismatch repair protein MutL [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 658 Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 176/659 (26%), Positives = 306/659 (46%), Gaps = 74/659 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+KL + I+ I+AGE+IE P +KEL+ENS+D++++ V I GGKS+ ++TDNG G Sbjct: 5 IKKLDDNIVKLISAGEVIESPCSVVKELVENSIDSKATSVVVEIKNGGKSYIRVTDNGCG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E + A ++H TSKIS DDF NI T GFRGEAL SI AV+ +++ ++ +N G Sbjct: 65 IGEEYVIEAFKKHTTSKISTFDDFINIGTNGFRGEALASISAVAKISMTTKTADSNYGIT 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ++ +K+ GT V V +L +PAR NFLKS++ E ITD + R A+A P Sbjct: 125 VVMNNDKLLEKTKTGAKDGTTVIVEELLENVPARKNFLKSDKAEGAKITDFLIRYALANP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK-SNEITLQGYTGI 239 + + ++ G + + + GE + +E++EK S+ ++++G G Sbjct: 185 NIKIRYINNSK---QVFATYATGKVIDVVDIIFGEKHGDKIIEVDEKLSDFLSIRGIIGN 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + + Y+F+NGR ++DK I + I AY + IP G YP+ L + I P VDVN+ Sbjct: 242 NSAMYSSRKMQYIFVNGRIIKDKNITAYIENAYKKFIPSGNYPLFFLDIIIKPSMVDVNI 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH---------QDNA 350 HP K ++F +I + I +I ++ + + ++K+ + ++ Sbjct: 302 HPNKLEVKFSEEKLIYSLIENAISNKLDNHNMIPTVNIAKEEKEEENIFNDILVNYKNRV 361 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLS-----------TNDLLPSDDPTYSEDNDPVEES 399 K K ++K+ + + R + + D Y+ +N+ ++ Sbjct: 362 QKKEEKKIRPIEEYEEQKIVISKQRQDEEFVYKVDVSVSEAKVEEDKKKYNSENEDRQKE 421 Query: 400 E------------------------------------------ATHYQLGIACAQIHQNY 417 E + L ++ Y Sbjct: 422 EMVSAEEQVRNNVSEITPLEVNTLSIPKRVVEKEIKTSDKKINSVDLTLLSYGGRVFDTY 481 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 I+ + + I+DQHAAHER+++E+ ++F S I Q LL P+ + + Sbjct: 482 IMLYNDEDMYIIDQHAAHERILYERFLREFYSNSIVQQQLLIPQNVVIPVNLVDYSQSII 541 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 E+ G + + FG N I +R IP L + + L ++ + ++ + + I++ + Sbjct: 542 EEASSFGFECDLFGDNIILVRAIPDFLDMEASLRFLDEVFNIYLEEKLSL---ELIKDKI 598 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLR--EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AT AC +I+ E ++E N C HGRP +L ++EK F R Sbjct: 599 ATKACKAAIKGNDT-SIKEEEIEKIIYDLEHCENKFACPHGRPVITRLSKYEMEKFFKR 656 >gi|50122856|ref|YP_052023.1| DNA mismatch repair protein [Pectobacterium atrosepticum SCRI1043] gi|81827002|sp|Q6D065|MUTL_ERWCT RecName: Full=DNA mismatch repair protein mutL gi|49613382|emb|CAG76833.1| DNA mismatch repair protein [Pectobacterium atrosepticum SCRI1043] Length = 651 Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 169/641 (26%), Positives = 283/641 (44%), Gaps = 83/641 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + + Sbjct: 61 SGIGKDELTLALARHATSKIATLDDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQSEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ T + + R+ + G F+ +A+ ++ + ++T+ G+ Sbjct: 181 ARFDVAITLHHNGKLMRQYRAAPDKNQYERRLGSICGATFLQHALAVSWQHGDLTIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++N R ++D+ I IR AY + + + P VL LEIDP QVDV Sbjct: 241 ADPVGAKQLPDMQYCYVNQRMMRDRLINHAIRQAYQDQLSDEQQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINK--------------------------KGI 331 NVHPAK +RF ++ +FI Q++ + + G Sbjct: 301 NVHPAKQEVRFHQARLVHDFIYQAVMSVLQQASAPRLDMTEPETGKPVQWQQENRPAAGE 360 Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + + + S + AP+T + + + E + ++ LL D S Sbjct: 361 NHFAQPPRTTNSPSYSGKAPRTGQARESANSGYQPENPYQKKQDELYKALLQPTDNGAST 420 Query: 392 DNDPVEES-------------------------------EATHYQLGIACAQIHQNYIIS 420 + E+ G Y + Sbjct: 421 PPSGIAAPSTVLHDSCPNRTATNTAASNNKQRALVESPLESQSTGFGRVLTVYPPCYALL 480 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 + GL I+ A L ++ + + +Q LL P+ + L + E ++ H L Sbjct: 481 EYHKGLAILSLPVAERYLKVVQL--TPSEEGLRAQPLLIPQRLTLSKSELNVLSTHHTLL 538 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 R GI A +R +P L ++N+ L+ ++I + D T T Q + + + M Sbjct: 539 TRFGIDVFVESQRA-TLRAVPLPLRQQNLQNLISELIGYLADYQTVETQQVEPDALASWM 597 Query: 541 ACYGSIRSGRKM-------QSIEMNRLLREMEKNPNSSQCN 574 A ++ + +LL ++E+ C Sbjct: 598 A--------TRLQSEQENWSHSQAIQLLADVERL-----CP 625 >gi|82779448|ref|YP_405797.1| DNA mismatch repair protein [Shigella dysenteriae Sd197] gi|309787674|ref|ZP_07682285.1| DNA mismatch repair protein mutL [Shigella dysenteriae 1617] gi|123769505|sp|Q328E9|MUTL_SHIDS RecName: Full=DNA mismatch repair protein mutL gi|81243596|gb|ABB64306.1| MutL [Shigella dysenteriae Sd197] gi|308924424|gb|EFP69920.1| DNA mismatch repair protein mutL [Shigella dysenteriae 1617] Length = 615 Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 167/605 (27%), Positives = 276/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHCDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI-------------- 342 VNVHPAK +RF ++ +FI Q + + ++ + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 343 -----SSFHQDNAPK-----THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 + + AP+ + A NTQ Q+ + L + Sbjct: 361 NHFAEPAVREPVAPRYTPAPASGSRPAAPWPNTQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 393 NDPVEES-EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +P E + A G +H + + + + ++ AA L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPAAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|291279564|ref|YP_003496399.1| DNA mismatch repair protein MutL [Deferribacter desulfuricans SSM1] gi|290754266|dbj|BAI80643.1| DNA mismatch repair protein MutL [Deferribacter desulfuricans SSM1] Length = 568 Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 170/582 (29%), Positives = 285/582 (48%), Gaps = 32/582 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + + N+IAAGE++ERP +KEL+ENSLDA ++++E + GG S ++ DNG Sbjct: 3 KINVLPDDVANKIAAGEVVERPFNVVKELVENSLDAGATKIEIELIDGGLSLIKVVDNGL 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ VQR TSKI+ +D +I++FGFRGEAL +I +VS ++ S+ G Sbjct: 63 GIDEEDLPLTVQRFATSKITKYEDIFSINSFGFRGEALSAISSVSDFSIKSK------GN 116 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ +S I S+ P A GTIV V++LF +PAR FLKS E I I+ +A+ Sbjct: 117 ELRVSFGNIISISPAAYTNGTIVTVKNLFEKVPARHKFLKSPTSEYKEILKYIKHIALLN 176 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 VSF + + + ++I N N++ + G Sbjct: 177 YNVSFKVINNGKVALNLINDNNLLDRVKKIIGEDYSFIELNF------ENKVKISGVVTT 230 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + + + +N R ++D I I AY +P RYP+ VL +EI P Q+DVNV Sbjct: 231 PDVQKFRKDSILIGVNNRAIKDNLIQQAILQAYHRKLPENRYPIAVLNIEISPDQIDVNV 290 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +IRF N ++ + ++++ + + +S + + K KY Sbjct: 291 HPAKLFIRFYNSNLLFKDVYKAVESCLKNYDLKNNSKGTSDIPLDELNFGGVKEDEIKYT 350 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+N + + + + + + N+ L + Q+ I+ Sbjct: 351 VDLSNIVDVVEINKEKNTKNNDLNLSYRQTLNKEFKI-------------IGQLFDTVIL 397 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + + L ++DQH AHER+++EK N+ ++S L P +I + E +++ Sbjct: 398 VEYNNELWLIDQHIAHERVLYEKFMN--NADFVSSVYLTEPLLISIDEELVEFCIKNQAK 455 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L + GI E+FG N I I +P+ K+I + +++ I ++S L + I Sbjct: 456 LAKCGIDLEQFGKNVIKINSVPSQFLNKDIEKEIKEFIKNSMESILDNDLNEP---IYLN 512 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 M+C +I++G K+ EMN ++ + K N C HGRP Sbjct: 513 MSCKLAIKAGDKLLEEEMNDIVSNLLKCENPFTCPHGRPIVY 554 >gi|271502155|ref|YP_003335181.1| DNA mismatch repair protein MutL [Dickeya dadantii Ech586] gi|270345710|gb|ACZ78475.1| DNA mismatch repair protein MutL [Dickeya dadantii Ech586] Length = 645 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 168/632 (26%), Positives = 282/632 (44%), Gaps = 71/632 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MSIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ ++ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 CGISKADLALALARHATSKIATLDDLEAIVSLGFRGEALASISSVSRLTLTSRTDAQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G +++ +P A GT +EV DLF+ PAR FL++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGREMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFMHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ T + S + R+ + G F+ +A+ ++ + ++ + G+ Sbjct: 181 ARFDVAITLHHNGKLIRQYRAVSESAQRERRLGSICGAAFLQHALAVSWQHGDLNIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R Y ++N R ++D+ I IR AY + + + P VL LE+DP QVDV Sbjct: 241 ADPAGSRQLPEMQYCYVNQRMMRDRLINHAIRQAYQDQLRDEQQPAYVLYLEVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK---------GISTSSVLSKKM------- 341 NVHPAK +RF ++ +FI Q++ + + +S + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVMTVLQQAASPGLNGMGDTQMASTVWQPENRTAAGE 360 Query: 342 ----------------ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 S+F + + P + TQ + ++ LL ++ Sbjct: 361 NHFARPATPTLTSELRSSAFTARESGEVGRPARESQPARTQTAGYDKKQGELYQRLLHTE 420 Query: 386 DPTYSEDNDPVEESE----------------------ATHYQLGIACAQIHQNYIISQTT 423 ++ + LG Y + + Sbjct: 421 SSGPQTVAREAPPAQDSLVKPHYVAEKTAVADDLPLASHSLGLGRVLTVYPPAYALVEYR 480 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 GL ++ A L ++ N + Q LL P+ + L E A++ + L + Sbjct: 481 QGLALLSLVVAERYLRQAQLTPPQNGEGLRPQPLLIPQRLTLNASELAVVQQQQPLLALM 540 Query: 484 GIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA-C 542 GI+ E P A +R +P L ++N+ L+ D++ + DS + + A +A Sbjct: 541 GIEVEVAPPRA-TLRAVPLPLRQQNLQNLISDLLGYLADSHDVKP-----DAVAAWIAGQ 594 Query: 543 YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 GS R + +LL ++E+ C Sbjct: 595 LGSER--ESWTLPQAVQLLSDVERL-----CP 619 >gi|323171601|gb|EFZ57247.1| DNA mismatch repair protein mutL [Escherichia coli LT-68] Length = 615 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 278/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++ L+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLMLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYSPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L +++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLR--QVQLTPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSVLAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|323161959|gb|EFZ47831.1| DNA mismatch repair protein mutL [Escherichia coli E128010] Length = 615 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 164/605 (27%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSITENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|218697919|ref|YP_002405586.1| DNA mismatch repair protein [Escherichia coli 55989] gi|254766166|sp|B7LC24|MUTL_ECO55 RecName: Full=DNA mismatch repair protein mutL gi|218354651|emb|CAV01641.1| methyl-directed mismatch repair protein [Escherichia coli 55989] Length = 615 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 164/605 (27%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASQDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|157158119|ref|YP_001465668.1| DNA mismatch repair protein [Escherichia coli E24377A] gi|157163633|ref|YP_001460951.1| DNA mismatch repair protein [Escherichia coli HS] gi|193066000|ref|ZP_03047058.1| DNA mismatch repair protein MutL [Escherichia coli E22] gi|209921658|ref|YP_002295742.1| DNA mismatch repair protein [Escherichia coli SE11] gi|260847000|ref|YP_003224778.1| methyl-directed mismatch repair protein [Escherichia coli O103:H2 str. 12009] gi|300816530|ref|ZP_07096751.1| DNA mismatch repair protein [Escherichia coli MS 107-1] gi|300922424|ref|ZP_07138544.1| DNA mismatch repair protein [Escherichia coli MS 182-1] gi|301325933|ref|ZP_07219354.1| DNA mismatch repair protein [Escherichia coli MS 78-1] gi|307314882|ref|ZP_07594474.1| DNA mismatch repair protein MutL [Escherichia coli W] gi|309796981|ref|ZP_07691381.1| DNA mismatch repair protein [Escherichia coli MS 145-7] gi|167017338|sp|A7ZV39|MUTL_ECO24 RecName: Full=DNA mismatch repair protein mutL gi|167017339|sp|A8A7R4|MUTL_ECOHS RecName: Full=DNA mismatch repair protein mutL gi|238058933|sp|B6I274|MUTL_ECOSE RecName: Full=DNA mismatch repair protein mutL gi|157069313|gb|ABV08568.1| DNA mismatch repair protein MutL [Escherichia coli HS] gi|157080149|gb|ABV19857.1| DNA mismatch repair protein MutL [Escherichia coli E24377A] gi|192926323|gb|EDV80959.1| DNA mismatch repair protein MutL [Escherichia coli E22] gi|209914917|dbj|BAG79991.1| DNA mismatch repair protein [Escherichia coli SE11] gi|257762147|dbj|BAI33644.1| methyl-directed mismatch repair protein [Escherichia coli O103:H2 str. 12009] gi|269852789|gb|ACZ50724.1| MutL [Escherichia coli] gi|300421243|gb|EFK04554.1| DNA mismatch repair protein [Escherichia coli MS 182-1] gi|300530760|gb|EFK51822.1| DNA mismatch repair protein [Escherichia coli MS 107-1] gi|300847286|gb|EFK75046.1| DNA mismatch repair protein [Escherichia coli MS 78-1] gi|306905685|gb|EFN36214.1| DNA mismatch repair protein MutL [Escherichia coli W] gi|308119394|gb|EFO56656.1| DNA mismatch repair protein [Escherichia coli MS 145-7] gi|315063484|gb|ADT77811.1| methyl-directed mismatch repair protein [Escherichia coli W] gi|323182276|gb|EFZ67686.1| DNA mismatch repair protein mutL [Escherichia coli 1357] gi|323380437|gb|ADX52705.1| DNA mismatch repair protein MutL [Escherichia coli KO11] gi|324019348|gb|EGB88567.1| DNA mismatch repair protein [Escherichia coli MS 117-3] Length = 615 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 164/605 (27%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|320200700|gb|EFW75286.1| DNA mismatch repair protein MutL [Escherichia coli EC4100B] Length = 615 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEI+P QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIEPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|295398603|ref|ZP_06808635.1| DNA mismatch repair protein HexB [Aerococcus viridans ATCC 11563] gi|294973204|gb|EFG48999.1| DNA mismatch repair protein HexB [Aerococcus viridans ATCC 11563] Length = 687 Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats. Identities = 152/686 (22%), Positives = 279/686 (40%), Gaps = 101/686 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++L ++ NQIAAGE++ERP+ +KEL+EN++DA +S + I G Q+ DNG Sbjct: 1 MAIQELPIQVANQIAAGEVVERPASVVKELVENAIDAGASEIAIHIKEAGLRSIQVIDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++++ +A +RH TSKI S D I T GFRGEALPSI +VS +T+ + + Sbjct: 61 RGIAADQVGLAFKRHATSKIYSSSDLFRIRTLGFRGEALPSIASVSEVTMNT--SDGESS 118 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++I I ++ + A+ GT V V +LF+ PARL +LKS Q E ITD+I R A+ Sbjct: 119 SEIYIKDGEVVDQKSSALRRGTSVLVENLFYNTPARLKYLKSLQTELAHITDIINREALG 178 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P + F ++ + + G E ++ + G + V + ++ + + GY Sbjct: 179 HPDIRFNYTHDGK---TLLSTNGKGRVNEVLAAIYGFRQAKDMVTIEGENLDFHISGYVS 235 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +P R + + +F+NGR +++ + I Y + +GRYP+ V+ +E+DP+ +DVN Sbjct: 236 LPAVTRASKSYMSLFVNGRFIKNYKLNQAILKGYGSKLMVGRYPIAVIYIELDPQLIDVN 295 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST------------------SSVLSKK 340 VHP K +R + + I I A+ S Sbjct: 296 VHPTKQEVRISKEDDLYDMIKTGIIDALAPVQRIPDVYADGEGDDGQSVNNSDSFASQSS 355 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE-- 398 +++ + P T+L + A+ + + ++ + + + D D EE Sbjct: 356 GQNNYRPLSQPTTYLGEQASLDFSASQSRHGSNSQQNDTSPFSGNGFSKIFDEDVHEEVK 415 Query: 399 ---------------------SEATHYQLGIACAQIHQNYIIS----------QTTDGLV 427 + ++ A + + QT + + Sbjct: 416 QSVQVPTYLWDEAQVVQAESLENEADHSDEVSVAYLDTEQEVDLPKSHNKPIWQTVNQVR 475 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA---LIMEHDEDLHRLG 484 +DQ + F ++ + + + + + + G Sbjct: 476 ALDQAIVDRNMSFPELTYVGQMQGTYLVAENETGMYLVDQHAAQERIKYEYYRDTIVEFG 535 Query: 485 -----------IKAERFGPNAI-AIREIPAILS-----KKNIPQLLRDIIDEIIDSSTTY 527 I IR P +L + P + + + Sbjct: 536 TAMQSLLLPIVFDFSNSEAQEIDQIR--PKLLKMGIDLEPFGPNAFQ--LQQHPIWMGKK 591 Query: 528 TLQDRIENILA-------------------TMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 +Q +E+++A M+C SI++ + ++ +LL ++ Sbjct: 592 NVQKIVEDLIALVLEDPKATVGNYREATAIMMSCKRSIKANHYLDDMQAKQLLHDLAYTK 651 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 N C HGRP + +IE++F R Sbjct: 652 NPYNCPHGRPVLVHFSNYEIERMFKR 677 >gi|91213719|ref|YP_543705.1| DNA mismatch repair protein [Escherichia coli UTI89] gi|91075293|gb|ABE10174.1| MutL, enzyme in methyl-directed mismatch repair [Escherichia coli UTI89] Length = 616 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 2 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 61 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 62 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 121 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 122 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 182 ARFDVTISLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 241 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 242 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 301 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 302 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 361 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + + P+Y+ + + + + ++ LL + P Sbjct: 362 NHFAEPAVREPVAPRYSPAPASGSRPAASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 421 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 422 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEVP 479 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 480 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 538 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 539 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 588 Query: 570 SSQCN 574 C Sbjct: 589 ---CP 590 >gi|110644527|ref|YP_672257.1| DNA mismatch repair protein [Escherichia coli 536] gi|117626517|ref|YP_859840.1| DNA mismatch repair protein [Escherichia coli APEC O1] gi|191174525|ref|ZP_03036023.1| DNA mismatch repair protein MutL [Escherichia coli F11] gi|218561329|ref|YP_002394242.1| DNA mismatch repair protein [Escherichia coli S88] gi|237703837|ref|ZP_04534318.1| MutL [Escherichia sp. 3_2_53FAA] gi|300988653|ref|ZP_07178793.1| DNA mismatch repair protein [Escherichia coli MS 200-1] gi|123048577|sp|Q0T9M3|MUTL_ECOL5 RecName: Full=DNA mismatch repair protein mutL gi|166232087|sp|A1AJ76|MUTL_ECOK1 RecName: Full=DNA mismatch repair protein mutL gi|226723034|sp|B7MKX4|MUTL_ECO45 RecName: Full=DNA mismatch repair protein mutL gi|110346119|gb|ABG72356.1| DNA mismatch repair protein MutL [Escherichia coli 536] gi|115515641|gb|ABJ03716.1| MutL, enzyme in methyl-directed mismatch repair [Escherichia coli APEC O1] gi|190905205|gb|EDV64846.1| DNA mismatch repair protein MutL [Escherichia coli F11] gi|218368098|emb|CAR05905.1| methyl-directed mismatch repair protein [Escherichia coli S88] gi|226901749|gb|EEH88008.1| MutL [Escherichia sp. 3_2_53FAA] gi|294490783|gb|ADE89539.1| DNA mismatch repair protein MutL [Escherichia coli IHE3034] gi|300305886|gb|EFJ60406.1| DNA mismatch repair protein [Escherichia coli MS 200-1] gi|307629241|gb|ADN73545.1| DNA mismatch repair protein [Escherichia coli UM146] gi|315288451|gb|EFU47849.1| DNA mismatch repair protein [Escherichia coli MS 110-3] gi|323950761|gb|EGB46639.1| DNA mismatch repair protein MutL [Escherichia coli H252] gi|323955457|gb|EGB51221.1| DNA mismatch repair protein MutL [Escherichia coli H263] gi|324013812|gb|EGB83031.1| DNA mismatch repair protein [Escherichia coli MS 60-1] Length = 615 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTISLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYSPAPASGSRPAASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEVP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|228474975|ref|ZP_04059703.1| DNA mismatch repair protein MutL [Staphylococcus hominis SK119] gi|228270960|gb|EEK12348.1| DNA mismatch repair protein MutL [Staphylococcus hominis SK119] Length = 674 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 164/674 (24%), Positives = 294/674 (43%), Gaps = 85/674 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA+++ + + G S ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAKATEINIEVEQSGISSIRVVDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + RH TSKI+ DD +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEQDDLQLVFHRHATSKINDDDDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNENGH 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I +I S +P GT ++V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYAENGEILSQKPAKAKKGTDIKVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + F+ + K N +G E ++++ G + V ++ +++ L+G+ Sbjct: 182 PNIRFSLISDGKTMLKTN---GSGRTNEVMAEIYGIKVAKDLVHISGDTSDYHLEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GRYP+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFALNKAITEGYHTLLTIGRYPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----KMISSFHQD----NA 350 HP K +R + N II+ I+ A + + + L + K++ +F Q Sbjct: 299 HPTKLEVRLSKEEQLYNLIIEKIRHAFKDRILIPKNDLDRTPKKNKVLHTFEQQKIDFEQ 358 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY--SEDNDPVEESEATHYQLGI 408 + ++ L N + N ST ++ T S + E S + + + Sbjct: 359 KQQNISNKIKQLENKNDPNVSTNNTFSTISSQYDEEHTSDDSYTREDNEHSSVYNNKRSM 418 Query: 409 ACAQIHQNYIISQTTDGLV-IVDQHAAHERLIF-----EKMRQDFNSTK----------- 451 I + D +D E I+ E +++ + K Sbjct: 419 DKDYFDIQKDILNSLDRAESSIDNTRHDETNIYNYDENEDFQENVTNQKEQDIKGKVSST 478 Query: 452 -------ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA--ERFGPNAIAIRE--I 500 + + I +++ R+ + E+ G + +++ I Sbjct: 479 PSRRVPYMEVVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVSNEVQDLLI 538 Query: 501 PAILSKKNIPQLLRD-------------------------------------IIDEIID- 522 P QL+ D II ++I+ Sbjct: 539 PLTFHFSKDEQLIIDQYREELDKVGVHLEHFGGYDYIVNSYPVWFPKVEAEEIIKDMIEL 598 Query: 523 --SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + ++ E+ M+C SI++ ++ EM L+ ++ + + C HGRP Sbjct: 599 VLNHKKIDVKKMREDAAIMMSCKKSIKANHYLKKNEMADLIDQLREAEDPFTCPHGRPII 658 Query: 581 IKLKLSDIEKLFGR 594 I ++EKLF R Sbjct: 659 INFSNYELEKLFKR 672 >gi|310765333|gb|ADP10283.1| DNA mismatch repair protein [Erwinia sp. Ejp617] Length = 608 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 160/545 (29%), Positives = 268/545 (49%), Gaps = 25/545 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ MA+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIDKDELAMALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTEAQSEA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q ++ +V+P A GT +EV DLF+ PAR F+++E+ E I ++IRR+A+ Sbjct: 121 WQAYAEGRDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + S + S +G R+ + G F+ +A+++ + +E++L G+ Sbjct: 181 ARFDVAISLSHNGKLVRQYRAVSDDGQRERRLGAICGTAFLTHALKIAWQHSELSLHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P ++ + Y ++NGR ++D+ I IR AY + + P VL LEIDP QVDV Sbjct: 241 ADPVGSKALSELQYCYVNGRMMRDRLINHAIRQAYQDKLGDRHQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-SSVLSKKMISSFHQDNAPKTHLP 356 NVHPAK +RF ++ +FI Q + + + G T + + + +N Sbjct: 301 NVHPAKHEVRFHQSRLVHDFIYQGVISVLQESGAETLPEIATVQPAERRQPENRQAAGGN 360 Query: 357 KYATSLT-------------NTQEKLFLQENRLSTNDLLP-----SDDPTYSEDNDPVEE 398 ++T QE L+ + LL + P S + Sbjct: 361 HFSTPAAAAPRPASPGGGSWQRQEPLYQKREGAVYQQLLQTPARSEEPPPASAAPNKEPP 420 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 + G + + Y + + +GL ++ A L ++ + S + Q LL Sbjct: 421 LSGHTHSFGRVLTVVQEQYALLEGKNGLALLALAVAARWLKQAQL--EPGSEGLKPQPLL 478 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P + L + E L+++GI +F + + +R +P L ++N+ L+ +++ Sbjct: 479 IPLRLKLDKAERDAGSRCSTLLNQMGIDL-QFDAHHVMLRAVPLPLRQQNLQNLIPEMLG 537 Query: 519 EIIDS 523 + Sbjct: 538 YLTRH 542 >gi|312965843|ref|ZP_07780069.1| DNA mismatch repair protein mutL [Escherichia coli 2362-75] gi|312289086|gb|EFR16980.1| DNA mismatch repair protein mutL [Escherichia coli 2362-75] Length = 615 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 269/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP-----------SDDPTYSE 391 F + A + P+Y + + N + Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKLKA 420 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQNFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|256025105|ref|ZP_05438970.1| DNA mismatch repair protein [Escherichia sp. 4_1_40B] Length = 615 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 269/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP-----------SDDPTYSE 391 F + A + P+Y + + N + Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKLKA 420 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSAEEKSALEKAQPALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|30065542|ref|NP_839713.1| DNA mismatch repair protein [Shigella flexneri 2a str. 2457T] gi|56480585|ref|NP_710035.2| DNA mismatch repair protein [Shigella flexneri 2a str. 301] gi|81839355|sp|Q83P35|MUTL_SHIFL RecName: Full=DNA mismatch repair protein mutL gi|30043806|gb|AAP19525.1| enzyme in methyl-directed mismatch repair [Shigella flexneri 2a str. 2457T] gi|56384136|gb|AAN45742.2| enzyme in methyl-directed mismatch repair [Shigella flexneri 2a str. 301] gi|281603632|gb|ADA76616.1| DNA mismatch repair protein mutL [Shigella flexneri 2002017] gi|313646355|gb|EFS10817.1| DNA mismatch repair protein mutL [Shigella flexneri 2a str. 2457T] gi|332749046|gb|EGJ79469.1| DNA mismatch repair protein mutL [Shigella flexneri K-671] gi|332749314|gb|EGJ79735.1| DNA mismatch repair protein mutL [Shigella flexneri 4343-70] gi|332761919|gb|EGJ92193.1| DNA mismatch repair protein mutL [Shigella flexneri 2747-71] gi|332763217|gb|EGJ93460.1| mutL [Shigella flexneri 2930-71] gi|333009218|gb|EGK28674.1| DNA mismatch repair protein mutL [Shigella flexneri K-218] gi|333010317|gb|EGK29750.1| DNA mismatch repair protein mutL [Shigella flexneri VA-6] gi|333011152|gb|EGK30566.1| DNA mismatch repair protein mutL [Shigella flexneri K-272] gi|333012045|gb|EGK31430.1| DNA mismatch repair protein mutL [Shigella flexneri K-304] gi|333012654|gb|EGK32034.1| DNA mismatch repair protein mutL [Shigella flexneri K-227] Length = 615 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E + I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFSHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYSPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|307298255|ref|ZP_07578059.1| DNA mismatch repair protein MutL [Thermotogales bacterium mesG1.Ag.4.2] gi|306916341|gb|EFN46724.1| DNA mismatch repair protein MutL [Thermotogales bacterium mesG1.Ag.4.2] Length = 598 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 179/607 (29%), Positives = 314/607 (51%), Gaps = 22/607 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+I +L ++ +IAAGE++ +KEL+ENS+DA +S VE I GGK + + DNG Sbjct: 1 MRIHELPTDVVRKIAAGEVVTGCFSVVKELVENSIDAGASLVEIEIRSGGKEYIMVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GMT++E +A++ H TSKIS +D ++ TFGFRGEAL +I +VS + L + G Sbjct: 61 SGMTNQEAKLAIKPHTTSKISSIEDLDSLITFGFRGEALSTIASVSRMRLSTAADSEELG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + I+G ++ +P++ + GT VEV DL + PAR FLKS +E ++T++I+R +A Sbjct: 121 TILEIAGGSVTGQKPLSGSNGTFVEVFDLLYNTPARRKFLKSASIEGRMVTEMIQRFILA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + V F +S + G+ +RI+ + + + ++ S EI + GY Sbjct: 181 FENVDFVYSRDSQTVFDTR---GAGSLQDRIALIYPGISTRDLIPVSGDSGEIKVNGYVT 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +P+ R N +F+N R V+ + + Y ET+ G +P VL ++IDP++VDVN Sbjct: 238 LPSRTRKNRMGENIFVNRRYVRQFELNYALERGYGETLQKGNFPFAVLFIDIDPQEVDVN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-----------KKMISSFHQ 347 +HP K ++F + + + + ++++ AI G T +++ +K +S +Q Sbjct: 298 IHPQKLEVKFASTAAVLDEVKRAVRSAIKGAGHFTINIVHSEENITGSSEERKDVSEIYQ 357 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 D+ H K+ + S D + + E E + Sbjct: 358 DHEVSNHGFKHPWRNQKVFDNNASDTYTQSRIDRHHFRSFALGGEREGSPEKEKSGEGKV 417 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 + Y+I+++ DGL+++DQHAAHER+IFE ++ S +I Q LL P ++L Sbjct: 418 SFIGVFGERYLIAESEDGLLLIDQHAAHERIIFETLK---ESKRIAPQNLLMPLELNLER 474 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 L++ +E L +LG + I + IP ++ + + +L +I+DE+ Sbjct: 475 SRMDLVIAREETLKKLGFTFDFVNDKIIMV-SIPQVMGVEGVVDVLEEILDEMRLEGLED 533 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 + +N+LA++AC +IR+G ++ + L E+ + N C HGRP + ++L D Sbjct: 534 P-KTVFDNLLASIACKAAIRTGNRLDIGQAEELFEELRR-KNLLVCPHGRPISMVIRLED 591 Query: 588 IEKLFGR 594 +++ F R Sbjct: 592 LDRYFSR 598 >gi|260858323|ref|YP_003232214.1| methyl-directed mismatch repair protein [Escherichia coli O26:H11 str. 11368] gi|257756972|dbj|BAI28474.1| methyl-directed mismatch repair protein [Escherichia coli O26:H11 str. 11368] gi|323156013|gb|EFZ42175.1| DNA mismatch repair protein mutL [Escherichia coli EPECa14] Length = 615 Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 279/605 (46%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E + I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFSHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRPIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYSPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 ++E A G +H + + + + ++ A L ++ Sbjct: 421 PELQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|300905999|ref|ZP_07123723.1| DNA mismatch repair protein [Escherichia coli MS 84-1] gi|300949129|ref|ZP_07163171.1| DNA mismatch repair protein [Escherichia coli MS 116-1] gi|300957829|ref|ZP_07170007.1| DNA mismatch repair protein [Escherichia coli MS 175-1] gi|301302586|ref|ZP_07208716.1| DNA mismatch repair protein [Escherichia coli MS 124-1] gi|300315460|gb|EFJ65244.1| DNA mismatch repair protein [Escherichia coli MS 175-1] gi|300402166|gb|EFJ85704.1| DNA mismatch repair protein [Escherichia coli MS 84-1] gi|300451377|gb|EFK14997.1| DNA mismatch repair protein [Escherichia coli MS 116-1] gi|300842111|gb|EFK69871.1| DNA mismatch repair protein [Escherichia coli MS 124-1] gi|315255514|gb|EFU35482.1| DNA mismatch repair protein [Escherichia coli MS 85-1] Length = 615 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 269/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP-----------SDDPTYSE 391 F + A + P+Y + + N + Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKLKA 420 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|218556722|ref|YP_002389636.1| DNA mismatch repair protein [Escherichia coli IAI1] gi|226723035|sp|B7M8T0|MUTL_ECO8A RecName: Full=DNA mismatch repair protein mutL gi|218363491|emb|CAR01145.1| methyl-directed mismatch repair protein [Escherichia coli IAI1] Length = 615 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 269/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP-----------SDDPTYSE 391 F + A + P+Y + + N + Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKLKA 420 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVEQL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|16131992|ref|NP_418591.1| methyl-directed mismatch repair protein [Escherichia coli str. K-12 substr. MG1655] gi|89110890|ref|AP_004670.1| methyl-directed mismatch repair protein [Escherichia coli str. K-12 substr. W3110] gi|170083616|ref|YP_001732936.1| methyl-directed mismatch repair protein [Escherichia coli str. K-12 substr. DH10B] gi|194439524|ref|ZP_03071598.1| DNA mismatch repair protein MutL [Escherichia coli 101-1] gi|238903277|ref|YP_002929073.1| methyl-directed mismatch repair protein [Escherichia coli BW2952] gi|253775205|ref|YP_003038036.1| DNA mismatch repair protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254037184|ref|ZP_04871261.1| methyl-directed mismatch repair protein mutL [Escherichia sp. 1_1_43] gi|254164099|ref|YP_003047207.1| DNA mismatch repair protein [Escherichia coli B str. REL606] gi|300929277|ref|ZP_07144753.1| DNA mismatch repair protein [Escherichia coli MS 187-1] gi|301027992|ref|ZP_07191276.1| DNA mismatch repair protein [Escherichia coli MS 196-1] gi|301646615|ref|ZP_07246481.1| DNA mismatch repair protein [Escherichia coli MS 146-1] gi|307140864|ref|ZP_07500220.1| DNA mismatch repair protein [Escherichia coli H736] gi|331644917|ref|ZP_08346034.1| DNA mismatch repair protein MutL [Escherichia coli H736] gi|127552|sp|P23367|MUTL_ECOLI RecName: Full=DNA mismatch repair protein mutL gi|229486327|sp|B1XDS1|MUTL_ECODH RecName: Full=DNA mismatch repair protein mutL gi|259509930|sp|C5A1G1|MUTL_ECOBW RecName: Full=DNA mismatch repair protein mutL gi|17017338|gb|AAL33626.1|AF440199_1 MutL [Escherichia coli] gi|42067|emb|CAA77850.1| MutL Protein [Escherichia coli] gi|537011|gb|AAA97066.1| CG Site No. 470; alternate gene name mut-25 [Escherichia coli str. K-12 substr. MG1655] gi|1790612|gb|AAC77127.1| methyl-directed mismatch repair protein [Escherichia coli str. K-12 substr. MG1655] gi|85676921|dbj|BAE78171.1| methyl-directed mismatch repair protein [Escherichia coli str. K12 substr. W3110] gi|169891451|gb|ACB05158.1| methyl-directed mismatch repair protein [Escherichia coli str. K-12 substr. DH10B] gi|194421523|gb|EDX37536.1| DNA mismatch repair protein MutL [Escherichia coli 101-1] gi|226840290|gb|EEH72292.1| methyl-directed mismatch repair protein mutL [Escherichia sp. 1_1_43] gi|238861767|gb|ACR63765.1| methyl-directed mismatch repair protein [Escherichia coli BW2952] gi|253326249|gb|ACT30851.1| DNA mismatch repair protein MutL [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253976000|gb|ACT41671.1| DNA mismatch repair protein [Escherichia coli B str. REL606] gi|253980156|gb|ACT45826.1| DNA mismatch repair protein [Escherichia coli BL21(DE3)] gi|260451003|gb|ACX41425.1| DNA mismatch repair protein MutL [Escherichia coli DH1] gi|269852795|gb|ACZ50725.1| MutL [Escherichia coli] gi|299878902|gb|EFI87113.1| DNA mismatch repair protein [Escherichia coli MS 196-1] gi|300462770|gb|EFK26263.1| DNA mismatch repair protein [Escherichia coli MS 187-1] gi|301075162|gb|EFK89968.1| DNA mismatch repair protein [Escherichia coli MS 146-1] gi|309704675|emb|CBJ04025.1| DNA mismatch repair protein [Escherichia coli ETEC H10407] gi|313848821|emb|CAQ34516.2| MutL, subunit of MutHLS complex, methyl-directed mismatch repair [Escherichia coli BL21(DE3)] gi|315138724|dbj|BAJ45883.1| DNA mismatch repair protein [Escherichia coli DH1] gi|323935400|gb|EGB31744.1| DNA mismatch repair protein MutL [Escherichia coli E1520] gi|323940089|gb|EGB36283.1| DNA mismatch repair protein MutL [Escherichia coli E482] gi|323970575|gb|EGB65834.1| DNA mismatch repair protein MutL [Escherichia coli TA007] gi|331035892|gb|EGI08130.1| DNA mismatch repair protein MutL [Escherichia coli H736] gi|332346247|gb|AEE59581.1| DNA mismatch repair protein MutL [Escherichia coli UMNK88] Length = 615 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 269/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP-----------SDDPTYSE 391 F + A + P+Y + + N + Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKLKA 420 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|218692504|ref|YP_002400716.1| DNA mismatch repair protein [Escherichia coli ED1a] gi|306815615|ref|ZP_07449764.1| DNA mismatch repair protein [Escherichia coli NC101] gi|254766167|sp|B7MSY3|MUTL_ECO81 RecName: Full=DNA mismatch repair protein mutL gi|218430068|emb|CAR11058.2| methyl-directed mismatch repair protein [Escherichia coli ED1a] gi|305851277|gb|EFM51732.1| DNA mismatch repair protein [Escherichia coli NC101] Length = 615 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 276/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYSPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEVP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|26251062|ref|NP_757102.1| DNA mismatch repair protein [Escherichia coli CFT073] gi|26111494|gb|AAN83676.1|AE016771_187 DNA mismatch repair protein mutL [Escherichia coli CFT073] Length = 616 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 276/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 2 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 61 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 62 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 121 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 122 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 182 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 241 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 242 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 301 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 302 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 361 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + + P+Y+ + + + + ++ LL + P Sbjct: 362 NHFAEPAVREPVAPRYSPAPASGSRPAASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 421 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 422 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEVP 479 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 480 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 538 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 539 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 588 Query: 570 SSQCN 574 C Sbjct: 589 ---CP 590 >gi|227886787|ref|ZP_04004592.1| DNA mismatch repair protein [Escherichia coli 83972] gi|300987265|ref|ZP_07178094.1| DNA mismatch repair protein [Escherichia coli MS 45-1] gi|301045958|ref|ZP_07193142.1| DNA mismatch repair protein [Escherichia coli MS 185-1] gi|29427778|sp|Q8FAK9|MUTL_ECOL6 RecName: Full=DNA mismatch repair protein mutL gi|227836360|gb|EEJ46826.1| DNA mismatch repair protein [Escherichia coli 83972] gi|300302041|gb|EFJ58426.1| DNA mismatch repair protein [Escherichia coli MS 185-1] gi|300407742|gb|EFJ91280.1| DNA mismatch repair protein [Escherichia coli MS 45-1] gi|307556337|gb|ADN49112.1| methyl-directed mismatch repair protein [Escherichia coli ABU 83972] gi|312948819|gb|ADR29646.1| DNA mismatch repair protein [Escherichia coli O83:H1 str. NRG 857C] gi|324005233|gb|EGB74452.1| DNA mismatch repair protein [Escherichia coli MS 57-2] Length = 615 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 276/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYSPAPASGSRPAASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEVP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|260870922|ref|YP_003237324.1| methyl-directed mismatch repair protein [Escherichia coli O111:H- str. 11128] gi|257767278|dbj|BAI38773.1| methyl-directed mismatch repair protein [Escherichia coli O111:H- str. 11128] gi|323176072|gb|EFZ61664.1| DNA mismatch repair protein mutL [Escherichia coli 1180] Length = 615 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 278/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E + I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFSHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRPIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYSPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|315617583|gb|EFU98189.1| DNA mismatch repair protein mutL [Escherichia coli 3431] Length = 615 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + NG R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPENGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P + A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNYTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLT---------NTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + + P+Y+ + + + ++ LL + Sbjct: 361 NHFAEPAVREPAAPRYSPAPAAGSRQAATWPNVQPGYQKQQGEVYRQLLQTPASMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEAQEPALAANSQSFGRVLTIVHSDCALLERDGKISLLSLPVAERWLRQAQL--TPGEVP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI+ + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIEFQS-DAQYVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|194426576|ref|ZP_03059130.1| DNA mismatch repair protein MutL [Escherichia coli B171] gi|194415315|gb|EDX31583.1| DNA mismatch repair protein MutL [Escherichia coli B171] Length = 615 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 164/605 (27%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGVICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSITENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|331660745|ref|ZP_08361677.1| DNA mismatch repair protein MutL [Escherichia coli TA206] gi|315299051|gb|EFU58305.1| DNA mismatch repair protein [Escherichia coli MS 16-3] gi|331051787|gb|EGI23826.1| DNA mismatch repair protein MutL [Escherichia coli TA206] Length = 615 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 276/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGANQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYSPAPASGSRPAASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEVP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|301023432|ref|ZP_07187215.1| DNA mismatch repair protein [Escherichia coli MS 69-1] gi|300397019|gb|EFJ80557.1| DNA mismatch repair protein [Escherichia coli MS 69-1] Length = 615 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 166/605 (27%), Positives = 275/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI-------------- 342 VNVHPAK +RF ++ +FI Q + + ++ + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 343 -----SSFHQDNAPK-----THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 +F + AP+ + A N Q Q+ + L + Sbjct: 361 NHFAEPAFREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 393 NDPVEES-EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +P E + A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|256019815|ref|ZP_05433680.1| DNA mismatch repair protein [Shigella sp. D9] gi|332280954|ref|ZP_08393367.1| DNA mismatch repair protein mutL [Shigella sp. D9] gi|332103306|gb|EGJ06652.1| DNA mismatch repair protein mutL [Shigella sp. D9] Length = 615 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LG+ + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSAEEKSALEKAQSALAELGVDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|293417673|ref|ZP_06660295.1| DNA mismatch repair protein mutL [Escherichia coli B185] gi|291430391|gb|EFF03389.1| DNA mismatch repair protein mutL [Escherichia coli B185] Length = 615 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 164/605 (27%), Positives = 278/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRPIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYSPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L +++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLR--QVQLTPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|315293548|gb|EFU52900.1| DNA mismatch repair protein [Escherichia coli MS 153-1] Length = 615 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 276/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVSQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYSPAPASGSRPAASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEVP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|284924352|emb|CBG37468.1| DNA mismatch repair protein [Escherichia coli 042] Length = 616 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 270/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 2 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 61 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 62 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 121 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 122 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + +++TL+G+ Sbjct: 182 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHSDLTLRGWV 241 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 242 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 301 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 302 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 361 Query: 344 ----------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P + + + ++ LL + P Sbjct: 362 NHFAEPAVCEPVAPRYTPAPSSGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 421 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 422 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQL--TPGEAP 479 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 480 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRSVPLPLRQQNLQI 538 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 539 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 588 Query: 570 SSQCN 574 C Sbjct: 589 ---CP 590 >gi|331650295|ref|ZP_08351367.1| DNA mismatch repair protein MutL [Escherichia coli M605] gi|281181266|dbj|BAI57596.1| DNA mismatch repair protein [Escherichia coli SE15] gi|330908512|gb|EGH37031.1| DNA mismatch repair protein MutL [Escherichia coli AA86] gi|331040689|gb|EGI12847.1| DNA mismatch repair protein MutL [Escherichia coli M605] Length = 615 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 269/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRNMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 344 ----------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYTPAPSSGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEVP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|293393216|ref|ZP_06637531.1| DNA mismatch repair protein MutL [Serratia odorifera DSM 4582] gi|291424362|gb|EFE97576.1| DNA mismatch repair protein MutL [Serratia odorifera DSM 4582] Length = 627 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 158/617 (25%), Positives = 270/617 (43%), Gaps = 59/617 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++ +A+ RH TSKIS DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 SGIGKADLALALARHATSKISTLDDLEAIVSLGFRGEALASISSVSRLTLTSRTAEQPEA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q ++ V+P A G+ VEV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDQAVMVKPAAHPVGSTVEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + R+ + G F+ +A+ ++ + ++T++G+ Sbjct: 181 ARFDVAINLSHNGKLMRQYRAAKEESQHERRLGSICGPAFLQHALAISWQHGDLTIRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R Y ++N R ++D+ I IR AY + + + P VL LE+DP QVDV Sbjct: 241 ADPAGARQLGELQYCYVNSRMMRDRLINHAIRQAYQDQLKDDQQPAYVLYLEVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK----- 352 NVHPAK +RF ++ +FI Q++ + + G + + P+ Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTTVLQQLGSAPLPLAEATDAPDPAPAWQPENRVAA 360 Query: 353 --THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN----------------- 393 H + A + R + E Sbjct: 361 GGNHFSQPAPRREPSAASPTAARERTPQPYHGGASGYQKREGELYGRLMQATTEPAATPA 420 Query: 394 --------------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 + + G Y + + L +++ A L Sbjct: 421 VETAKVPLFPAPKAAQEMPLAGSQHGFGRVLMVYPPCYALLEQRQQLALLNLPVAERWLR 480 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 ++ + Q LL P + L E + H L ++G++ + + +R Sbjct: 481 QAQLNPP--EEGLRPQPLLIPLKLTLRNNEASACTRHQALLVKMGLEL-QVDHGRVTLRA 537 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSGRKMQSIEM 557 +P L ++N+ +L+ +++ + + +LAT +A + GS ++ S + Sbjct: 538 VPLPLRQQNLQKLIPELLGYLAEHHEMSPT------VLATWIARHIGS--EHQQWNSSQA 589 Query: 558 NRLLREMEKNPNSSQCN 574 +LL ++E+ C Sbjct: 590 IQLLTDVERL-----CP 601 >gi|323975489|gb|EGB70590.1| DNA mismatch repair protein MutL [Escherichia coli TW10509] Length = 615 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 164/605 (27%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRTIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYSPAPASGGRPAASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ T Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQL--TPGETP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQYVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|323189951|gb|EFZ75229.1| DNA mismatch repair protein mutL [Escherichia coli RN587/1] Length = 615 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 269/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKMVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 344 ----------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLELDGNISLLALPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|300821261|ref|ZP_07101409.1| DNA mismatch repair protein [Escherichia coli MS 119-7] gi|331671075|ref|ZP_08371908.1| DNA mismatch repair protein MutL [Escherichia coli TA271] gi|331680300|ref|ZP_08380959.1| DNA mismatch repair protein MutL [Escherichia coli H591] gi|300526150|gb|EFK47219.1| DNA mismatch repair protein [Escherichia coli MS 119-7] gi|331061664|gb|EGI33590.1| DNA mismatch repair protein MutL [Escherichia coli TA271] gi|331071763|gb|EGI43099.1| DNA mismatch repair protein MutL [Escherichia coli H591] Length = 615 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 164/605 (27%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|218702867|ref|YP_002410496.1| DNA mismatch repair protein [Escherichia coli IAI39] gi|218372853|emb|CAR20732.2| methyl-directed mismatch repair protein [Escherichia coli IAI39] Length = 616 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 162/605 (26%), Positives = 269/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 2 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 61 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 62 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 121 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 122 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 182 ARFDVTINLSHNGKMVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 241 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 242 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 301 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 302 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 361 Query: 344 ----------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P + + + ++ LL + P Sbjct: 362 NHFAEPAVREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 421 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G IH + + + + ++ A L ++ Sbjct: 422 PEPQEPALAANSQSFGRVLTIIHSDCALLERDGNISLLALPVAERWLRQAQL--TPGEAP 479 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 480 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 538 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 539 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 588 Query: 570 SSQCN 574 C Sbjct: 589 ---CP 590 >gi|296100937|ref|YP_003611083.1| DNA mismatch repair protein [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055396|gb|ADF60134.1| DNA mismatch repair protein [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 614 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 162/603 (26%), Positives = 282/603 (46%), Gaps = 42/603 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A GT +EV DLF+ PAR F+++E+ E I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + G R+ + G F+ A+ + + ++ L+G+ Sbjct: 181 ARFDVTINLSHNGKVMRQYRAVAEGGQKERRLGAICGTPFLEQALAIEWQHGDLALRGWV 240 Query: 238 GIPT-FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P + A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNASSAAFAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN------- 349 VNVHPAK +RF ++ +FI Q + + ++ T + ++ S +N Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQVEPTLPLEKEEPASRPIPENRVAAGRN 360 Query: 350 -------APKTHLPKYATSLTNTQ---------EKLFLQENRLSTNDLLPSDDPTYSEDN 393 A + P+++++ + + + + ++ LL + T E + Sbjct: 361 HFAEPAVAREPEAPRFSSAGSAPRPTGANYPNAQPGYQKQQGALYRKLLETPAVTRKEHS 420 Query: 394 DPVEES-EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + S E G I + + + L+++ A ++++ Sbjct: 421 EVQAPSLEGHSQSFGRVLTIIAPDMALLEREGKLMLLALPVAERW--LKQVQLTPGENAA 478 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 +Q LL P + + E ++ + L ++GI+ + IR +P L ++N+ L Sbjct: 479 CAQPLLIPVRLKISTEETRVLQRAEAQLAQMGIEM-VLESQHVTIRAVPLPLRQQNLQNL 537 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + ++I + +T +A + + + +L E+E+ Sbjct: 538 IPELIGYLAQQTTFDAANTAQW-----IARHLA-SEHTPWSMAQAISVLAEVERL----- 586 Query: 573 CNH 575 C H Sbjct: 587 CPH 589 >gi|331655998|ref|ZP_08356986.1| DNA mismatch repair protein MutL [Escherichia coli M718] gi|331046352|gb|EGI18442.1| DNA mismatch repair protein MutL [Escherichia coli M718] Length = 615 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 164/605 (27%), Positives = 276/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|251788130|ref|YP_003002851.1| DNA mismatch repair protein [Dickeya zeae Ech1591] gi|247536751|gb|ACT05372.1| DNA mismatch repair protein MutL [Dickeya zeae Ech1591] Length = 649 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 169/636 (26%), Positives = 280/636 (44%), Gaps = 75/636 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 CGIGKADLALALARHATSKIATLDDLEAIVSLGFRGEALASISSVSRLTLTSRTEAQAEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGREMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFMHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ T + S R+ + G F+ +A+ ++ + ++ + G+ Sbjct: 181 ARFDVAITLHHNGKLIRQYRAVSEPAQRERRLGSICGAAFLQHALAVSWQHGDLNIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R Y ++N R ++D+ I IR AY + + + P VL LE+DP QVDV Sbjct: 241 ADPVGSRQLPEMQYCYVNQRMMRDRLINHAIRQAYQDQLRDEQQPAYVLYLEVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------- 344 NVHPAK +RF ++ +FI Q++ + + S + ++ Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVMTVLQQAASPRLSGVGDAQAAAATWQPENRIAAGE 360 Query: 345 --FHQDNAPKTHLPK---------------YATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 F + K +P+ TQ + ++ LL ++ Sbjct: 361 NHFARPAVQKQDMPEAVPPAKTAGAAGRQVREPQPPRTQATGYQKKQGELYQQLLHTESS 420 Query: 388 TYSEDNDPVEES----------------------------EATHYQLGIACAQIHQNYII 419 E+ LG A Y + Sbjct: 421 RPHSVARDTSPEKDSPAKDSPAVRRETPEKTAVAAESLSLESHALGLGRVLAVYPPAYAL 480 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + G ++ A L ++ + + Q LL P+ + L E A++ + Sbjct: 481 VEYRQGPALLSLTVAERYLRQAQLTPSASGEGLRPQPLLIPQRLTLNASELAVMQQQLPL 540 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L +GI+ E P A +R +P L ++N+ L+ D++ + DS + + A Sbjct: 541 LTLMGIEVELSPPRA-TLRAVPLPLRQQNLQNLISDLLGYLADSHDVKP-----DAVAAW 594 Query: 540 MA-CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 +A GS R + + +LL ++E+ C Sbjct: 595 IAGQLGSERENWTL--AQAVQLLADVERL-----CP 623 >gi|324118735|gb|EGC12627.1| DNA mismatch repair protein MutL [Escherichia coli E1167] Length = 615 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 164/605 (27%), Positives = 278/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L +++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLR--QVQLTPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|312974023|ref|ZP_07788194.1| DNA mismatch repair protein mutL [Escherichia coli 1827-70] gi|310331557|gb|EFP98813.1| DNA mismatch repair protein mutL [Escherichia coli 1827-70] Length = 615 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 269/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP-----------SDDPTYSE 391 F + A + P+Y + + N + Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKLKA 420 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|323965556|gb|EGB61010.1| DNA mismatch repair protein MutL [Escherichia coli M863] gi|327250110|gb|EGE61829.1| DNA mismatch repair protein mutL [Escherichia coli STEC_7v] Length = 615 Score = 418 bits (1075), Expect = e-114, Method: Composition-based stats. Identities = 162/605 (26%), Positives = 271/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ +A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEHALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPTLAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 344 ----------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ T Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQL--TPGETP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQYVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|170766784|ref|ZP_02901237.1| DNA mismatch repair protein MutL [Escherichia albertii TW07627] gi|170124222|gb|EDS93153.1| DNA mismatch repair protein MutL [Escherichia albertii TW07627] Length = 615 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 276/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + NG R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPENGQKERRLGAICGTAFLEQALAIAWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P + A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNYTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQSAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLT---------NTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + + P+Y+ + + + ++ LL + Sbjct: 361 NHFAEPAVREPAAPRYSPAPAAGSRQAATWPNAQPGYQKQQGEVYRQLLQTPASMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + ++ A L ++ Sbjct: 421 PEAQEPALAANSQSFGRVLTIVHSDCALLDRDGKISLLSLPVAERWLRQAQL--TPGEVP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI+ + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIEFQS-DAQYVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|188494580|ref|ZP_03001850.1| DNA mismatch repair protein MutL [Escherichia coli 53638] gi|188489779|gb|EDU64882.1| DNA mismatch repair protein MutL [Escherichia coli 53638] Length = 615 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 164/605 (27%), Positives = 276/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALSVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|317493567|ref|ZP_07951988.1| DNA mismatch repair protein MutL [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918510|gb|EFV39848.1| DNA mismatch repair protein MutL [Enterobacteriaceae bacterium 9_2_54FAA] Length = 638 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 164/626 (26%), Positives = 279/626 (44%), Gaps = 66/626 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL S+ +VS LT+ SR + N Sbjct: 61 CGINKDELALALARHATSKITSLDDLEAIMSLGFRGEALASVSSVSRLTMTSRTAEQNEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT VEV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTVKPAAHPVGTTVEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + +G R+ + G FI +A+E+ + ++ + G+ Sbjct: 181 ARFDVTIQLHHNGKMIRQYRAVKEDGQKDRRLGSICGTAFIQHALEIKWEHGDLAIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R Y ++NGR ++DK I IR AY + + + P VL L +DP QVDV Sbjct: 241 AGPVGSRQLTEMQYSYVNGRMMRDKLITHAIRQAYQDQLKDDQQPAYVLYLTVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ + + ++ + +N + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVISVLQQSEQPALPEMAADEAPRWEPENRVAAGVNQ 360 Query: 358 YATSLTNTQEKLF----------------------------------------LQENRLS 377 ++ + + + E R+ Sbjct: 361 FSKTPLREASPAYGHSSTQGQASDKKKPSDNRHFSSGDGYQKREGQLYQRLMQVPEKRMP 420 Query: 378 TNDLLPSDDPTYSEDNDPVEE---------SEATHYQLGIACAQIHQNYIISQTTDGLVI 428 + + S + N E E G Q++ + + G+ + Sbjct: 421 QSQEIQSSSELFPVVNPRKPELFPQPAPALFEHGESSFGRVLTIYEQHFALLERQHGIAL 480 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 ++ AA + +++ + + Q LL P + L E + E L LGI Sbjct: 481 LNLDAAE--IELRRVQLLPGTEGLRPQPLLIPVKLTLSADEIQGVQSCSERLKHLGIDL- 537 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 + +R +P L +N+PQL+ + + + + + I LA+ + I Sbjct: 538 VLERQRVTLRAVPLPLRHQNLPQLIPAFLSFLAEQPNAES--ETISKWLAS---HL-ITE 591 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCN 574 + + +LL E+E+ C Sbjct: 592 REQWTVSQAIQLLAELERL-----CP 612 >gi|293407897|ref|ZP_06651737.1| DNA mismatch repair protein mutL [Escherichia coli B354] gi|291472148|gb|EFF14630.1| DNA mismatch repair protein mutL [Escherichia coli B354] Length = 616 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 269/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 2 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 61 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 62 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 121 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 122 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 182 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 241 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 242 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 301 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 302 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 361 Query: 344 ----------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P + + + ++ LL + P Sbjct: 362 NHFAEPAVREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 421 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 422 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQL--TPGEAP 479 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 480 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 538 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 539 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 588 Query: 570 SSQCN 574 C Sbjct: 589 ---CP 590 >gi|170681264|ref|YP_001746565.1| DNA mismatch repair protein [Escherichia coli SMS-3-5] gi|300940657|ref|ZP_07155218.1| DNA mismatch repair protein [Escherichia coli MS 21-1] gi|331665834|ref|ZP_08366728.1| DNA mismatch repair protein MutL [Escherichia coli TA143] gi|226723037|sp|B1LQJ0|MUTL_ECOSM RecName: Full=DNA mismatch repair protein mutL gi|170518982|gb|ACB17160.1| DNA mismatch repair protein MutL [Escherichia coli SMS-3-5] gi|300454545|gb|EFK18038.1| DNA mismatch repair protein [Escherichia coli MS 21-1] gi|331056885|gb|EGI28879.1| DNA mismatch repair protein MutL [Escherichia coli TA143] Length = 615 Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 269/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 344 ----------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|110808088|ref|YP_691608.1| DNA mismatch repair protein [Shigella flexneri 5 str. 8401] gi|123047666|sp|Q0SXB2|MUTL_SHIF8 RecName: Full=DNA mismatch repair protein mutL gi|110617636|gb|ABF06303.1| DNA mismatch repair protein [Shigella flexneri 5 str. 8401] Length = 627 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 157/553 (28%), Positives = 262/553 (47%), Gaps = 32/553 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E + I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFSHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYSPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSS 524 L+ ++I + S Sbjct: 538 LIPELIGYLAKQS 550 >gi|42518562|ref|NP_964492.1| DNA mismatch repair protein MutL [Lactobacillus johnsonii NCC 533] gi|81832287|sp|Q74KW0|MUTL_LACJO RecName: Full=DNA mismatch repair protein mutL gi|41582847|gb|AAS08458.1| DNA mismatch repair protein MutL [Lactobacillus johnsonii NCC 533] Length = 630 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 184/635 (28%), Positives = 290/635 (45%), Gaps = 53/635 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS ++ NQIAAGE+IERP+ +KEL ENSLDA S R+ G + DNG Sbjct: 3 KIHELSPELTNQIAAGEVIERPASVVKELCENSLDAGSKRIRIDFIDAGLKQITVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A RH TSKI+ D NI T GFRGEAL SI AVSH+ + + N G Sbjct: 63 GIAKDQIDLAFTRHATSKIATERDLFNISTLGFRGEALASIAAVSHVEVTT-SNDNLGGV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG + A GT + V DLFF PARL +L+SE+ E I D++ R+A+ + Sbjct: 122 RAIFSGSEKKLQEDAASPKGTKITVSDLFFNTPARLKYLRSERTEILKIVDIVNRLALGH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT + + + + + I+ + G L KS + + G Sbjct: 182 PDVSFTLTNNGK---VLLKTNGRDDLRQDIANIYGRQLAEKMNILKGKSPDFEISGLISD 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + +NGR +++ + I Y + RYP+ V+ +E+DP VDVNV Sbjct: 239 PNTTRSNRNFISLLLNGRYIKNYRLTQAIMAGYGNKLRPRRYPIAVVKIELDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-----------------------SV 336 HP K +R + + SI +A+ + S V Sbjct: 299 HPTKQEVRLSKEQELERLLTTSISEALEQNNQIDSGLNNLLAPKKSTNIDQLKFNLNKDV 358 Query: 337 LSKKMISSFHQDNAPKTHLPKYATS----------------LTNTQEKLFLQENRLSTND 380 ++ F P + + T +T+T Q+ +LS D Sbjct: 359 VNTARPVEFTPQVEPDQNAEVHETGANFVSLDQVRNDDKYVITSTWNDNVNQQVQLSPFD 418 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 +E A + Q ++Y+I+ + L ++DQ A+ RL + Sbjct: 419 EEKDMQGKDDSIISSGDEILANNLPELTYMGQT-KSYLIAHHEEDLYLIDQVNAYRRLAY 477 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 +++ QD NS I+ Q LL+P I+D + + E+ E+L G+ E FG N++ +R Sbjct: 478 DQILQDLNSENISQQGLLSPLILDFSNVDYLKLKENLENLQEFGLFLEDFGQNSLILRTY 537 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL--ATMACYGSIRSGRKMQSIEMN 558 P L + + + +R I+D ++ T + + I TM S R R + +E Sbjct: 538 PMWL-QPDAEKNVRMILDLYLNQ-TEHDISKLKAQIAGEITM--RQSARR-RMLNPVEAQ 592 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 LL+E+ + + Q G+ I+L +D+ K+F Sbjct: 593 ELLKELRNSSDPYQDFEGKIIIIQLSENDLNKMFK 627 >gi|313673031|ref|YP_004051142.1| DNA mismatch repair protein mutl [Calditerrivibrio nitroreducens DSM 19672] gi|312939787|gb|ADR18979.1| DNA mismatch repair protein MutL [Calditerrivibrio nitroreducens DSM 19672] Length = 566 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 180/599 (30%), Positives = 292/599 (48%), Gaps = 38/599 (6%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 M I KL I N+IAAGE++ERP +KEL+ENS+DA + ++E I GG S +++D Sbjct: 1 MPSEIIKLPSDISNKIAAGEVVERPFNVVKELLENSIDAGADKIEIEINDGGLSLIKVSD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG G+ ++P ++R+ TSKI +D +I+++GFRGEAL +I +VS + S+ + Sbjct: 61 NGRGILPNDLPNTIERYATSKIKRFEDIYSINSYGFRGEALAAISSVSDFKIHSKRDGYD 120 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G + + + ++P + GTIVEV +LF IP R FLK+ E I I+ + Sbjct: 121 -GFVLIKNFGENFVIKPSPIPNGTIVEVANLFQKIPVRKKFLKNSNSEYREILKFIKCFS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 V+ + ++ + ++I ++ EL ++++G Sbjct: 180 SINFNVTLKLIKDGEVVLDLLKDNSMIDRVKKIFN------ESSLFELKNTYGSLSIEGV 233 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P + + + +N R V+D I+ +I AY +P RYP + L I +D Sbjct: 234 LSTPNNQKFRKDYLIISVNKRIVKDFGIMQSIINAYHRLMPENRYPFAFINLNITGDDLD 293 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHP K ++F N I +F+ SI+ +N +S+S V S+ D + + P Sbjct: 294 VNVHPTKMAVKFFNSNDIFSFVYDSIKAELNSLTLSSSHV----TQSNQEPDKKDEIYQP 349 Query: 357 KYATSLTNTQ-EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 K N EK+ E +S + + T E Q+ + Sbjct: 350 KNPELKYNIDLEKILSSEKDISVRESYSNYSDTDKEI---------------KIIGQLFK 394 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 I+ + D LV +DQH AHER+++EK + NS I S L P I+D+ + + ++ + Sbjct: 395 TVILCEINDELVFIDQHIAHERVLYEKYKSMKNS--IPSIVLYEPIIMDVSQEDREILSK 452 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 + E L++ G + E FG ++I I IP+ L K + + L+DII+EI + D+I Sbjct: 453 NIELLNKFGFEIEFFGKDSIKISSIPSSLIKSDPVEELKDIIEEINSLKVSE--NDKIPL 510 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 I M+C +I+SG + EM L+ + K N C HGRP K+ I K F R Sbjct: 511 I---MSCKNAIKSGDYLTDFEMEELVTNLFKTTNPYTCPHGRPIIFKMSKETIYKKFHR 566 >gi|157368676|ref|YP_001476665.1| DNA mismatch repair protein [Serratia proteamaculans 568] gi|167012378|sp|A8G8U7|MUTL_SERP5 RecName: Full=DNA mismatch repair protein mutL gi|157320440|gb|ABV39537.1| DNA mismatch repair protein MutL [Serratia proteamaculans 568] Length = 624 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 160/614 (26%), Positives = 278/614 (45%), Gaps = 56/614 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ +A+ RH TSKIS DD I + GFRGEAL SI +VS LTL SR + N Sbjct: 61 SGIGKDDLALALARHATSKISTLDDLEAIVSLGFRGEALASISSVSRLTLTSRTAEQNEA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q ++ +V+P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDQAVTVKPAAHPIGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + R+ + G F+ +A+ ++ + ++T++G+ Sbjct: 181 ARFDVAINLSHNGKLMRQYRAAKDESQYERRLGSICGPAFLQHALNISWQHGDLTIRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R Y ++N R ++D+ I IR AY + + + P VL LE+DP QVDV Sbjct: 241 ADPAGARQLGEMQYCYVNSRMMRDRLINHAIRQAYQDQLKDDQQPAYVLYLEVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST----------SSVLSKKMISSFHQ 347 NVHPAK +RF ++ +FI Q++ + + G + + + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTTVLQQVGNAPLPLTDETEQQPTPVWQPENRVAAG 360 Query: 348 DNAPKTHLPKYATSLTNTQ-------------------------EKLFLQENRLSTNDLL 382 N P+ T+ T KL Sbjct: 361 GNHFSQPAPRRETASTEPAVARERAPQPAYHSGSGYQKREGELYGKLLQATPVAEPRQEA 420 Query: 383 PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 P + + + G Y + + L++++ A L + Sbjct: 421 PKQPLFPPVKTEQETPLAGSQHSFGRVLMIYPPCYALIENGQQLMLLNLPVAERWLRQAQ 480 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 + + + + Q LL P + L + E A + H L +G+ + + +R +P Sbjct: 481 L--NPSQEGLRPQPLLIPIKLTLNKQEAAACIHHQPLLVTMGLDL-QVDHGRVTLRAVPL 537 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSGRKMQSIEMNRL 560 L ++N+ +L+ +++ + + +LAT A + GS + + + +L Sbjct: 538 PLRQQNLQKLIPELLGYLAEHQEMSP------AVLATWFARHLGS--EHEQWNTSQAIQL 589 Query: 561 LREMEKNPNSSQCN 574 L ++E+ C Sbjct: 590 LTDVERL-----CP 598 >gi|292493408|ref|YP_003528847.1| DNA mismatch repair protein MutL [Nitrosococcus halophilus Nc4] gi|291582003|gb|ADE16460.1| DNA mismatch repair protein MutL [Nitrosococcus halophilus Nc4] Length = 604 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 185/613 (30%), Positives = 299/613 (48%), Gaps = 41/613 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L + NQIAAGE++ERP+ +KEL+EN+LDA + R+E GG ++ D+G Sbjct: 8 RIQLLPPALANQIAAGEVVERPASVLKELVENALDAGAQRIEIESEAGGIGLIRVRDDGC 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A+ H TSKI + NI T GFRGEAL SI AVSHL+L SR G Sbjct: 68 GIHPEDLCLALSSHATSKIRQQEQLLNITTLGFRGEALASISAVSHLSLNSRVVNEEYGW 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + ++V+PVA GT VEVRDLF+ PAR FL+ E+ E + + R+A+++ Sbjct: 128 CLR----ENTAVQPVAHPVGTTVEVRDLFYNTPARRRFLRGEKTEFMHLRATLERLALSH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 +VSF S + + + + + +RI+++ G+ F +++ + + L G+ G Sbjct: 184 FEVSFRVSYNRRPLFTLPSCLRSPDQLKRIAKICGQAFTEHSLYFKREIEGLRLWGWLGH 243 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F R N Y ++N R V+D+ + R AY +P GR+P +L LE+ P QVDVN Sbjct: 244 PEFCRSQTNLQYFYVNQRMVRDRLLTHATRQAYGNRLPPGRHPAYLLYLELPPSQVDVNA 303 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP--- 356 HPAK+ +RFR + F+++++ + + + + + S + +P Sbjct: 304 HPAKNEVRFREARQVHGFVVRTLTEILEQAESEGAPKPTADAPLSGDAPHGSPLEVPICS 363 Query: 357 -------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 + T + +L+ LP S + E S LG A Sbjct: 364 QQTGQALQPKPHGTPHKGRLYPVAEAAEHYSPLPRGSRIPSRKGNHNESS-----LLGQA 418 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 A + Y++++ GLV+VD AA RL ++R + IT Q LL P + + Sbjct: 419 QALVLGRYLLAENHQGLVLVDLPAARARLAQARLRAAYARDHITRQPLLLPLTFKVSPQQ 478 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 +H +L LG R GP+ + +REIPA L + N+ Q L ++ + + Sbjct: 479 AEWTEQHASELLTLGFGLHRLGPSVVVLREIPASLRELNLEQWLPALLTRLTEQQQEKLE 538 Query: 530 QDRIENILATMACYGSIRSGR-------KMQSIEMNRLLREMEKNPNSSQC-NH--GRPT 579 + ++ I+ + +GR EMN LLRE+EK Q +P Sbjct: 539 ETPLKEIIVSF-------TGRYPAPTISPPSLQEMNVLLRELEKL---YQNEPDLKSKPP 588 Query: 580 FIKLKLSDIEKLF 592 + L + IE+ F Sbjct: 589 WHALPKNKIEEWF 601 >gi|168754739|ref|ZP_02779746.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4401] gi|168766447|ref|ZP_02791454.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4486] gi|168774119|ref|ZP_02799126.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4196] gi|168780600|ref|ZP_02805607.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4076] gi|168784805|ref|ZP_02809812.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC869] gi|168801823|ref|ZP_02826830.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC508] gi|195935960|ref|ZP_03081342.1| DNA mismatch repair protein [Escherichia coli O157:H7 str. EC4024] gi|208806122|ref|ZP_03248459.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4206] gi|208812969|ref|ZP_03254298.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4045] gi|208818355|ref|ZP_03258675.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4042] gi|209398397|ref|YP_002273712.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4115] gi|254796189|ref|YP_003081026.1| DNA mismatch repair protein [Escherichia coli O157:H7 str. TW14359] gi|261225290|ref|ZP_05939571.1| methyl-directed mismatch repair protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255458|ref|ZP_05947991.1| methyl-directed mismatch repair protein [Escherichia coli O157:H7 str. FRIK966] gi|291285582|ref|YP_003502400.1| DNA mismatch repair protein MutL [Escherichia coli O55:H7 str. CB9615] gi|238058932|sp|B5Z2H6|MUTL_ECO5E RecName: Full=DNA mismatch repair protein mutL gi|187770214|gb|EDU34058.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4196] gi|189001632|gb|EDU70618.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4076] gi|189357920|gb|EDU76339.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4401] gi|189364233|gb|EDU82652.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4486] gi|189374786|gb|EDU93202.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC869] gi|189376066|gb|EDU94482.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC508] gi|208725923|gb|EDZ75524.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4206] gi|208734246|gb|EDZ82933.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4045] gi|208738478|gb|EDZ86160.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4042] gi|209159797|gb|ACI37230.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC4115] gi|209750298|gb|ACI73456.1| enzyme in methyl-directed mismatch repair [Escherichia coli] gi|209750302|gb|ACI73458.1| enzyme in methyl-directed mismatch repair [Escherichia coli] gi|209750304|gb|ACI73459.1| enzyme in methyl-directed mismatch repair [Escherichia coli] gi|209750306|gb|ACI73460.1| enzyme in methyl-directed mismatch repair [Escherichia coli] gi|254595589|gb|ACT74950.1| methyl-directed mismatch repair protein [Escherichia coli O157:H7 str. TW14359] gi|290765455|gb|ADD59416.1| DNA mismatch repair protein MutL [Escherichia coli O55:H7 str. CB9615] gi|320190698|gb|EFW65348.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. EC1212] gi|320638928|gb|EFX08574.1| DNA mismatch repair protein [Escherichia coli O157:H7 str. G5101] gi|320644297|gb|EFX13362.1| DNA mismatch repair protein [Escherichia coli O157:H- str. 493-89] gi|320649615|gb|EFX18139.1| DNA mismatch repair protein [Escherichia coli O157:H- str. H 2687] gi|320655011|gb|EFX22972.1| DNA mismatch repair protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660518|gb|EFX27979.1| DNA mismatch repair protein [Escherichia coli O55:H7 str. USDA 5905] gi|320665787|gb|EFX32824.1| DNA mismatch repair protein [Escherichia coli O157:H7 str. LSU-61] gi|326345498|gb|EGD69241.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. 1125] Length = 615 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 270/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH---------- 346 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRPIPENRVAAGR 360 Query: 347 -------------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L +++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLR--QVQLTPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|188588377|ref|YP_001921075.1| DNA mismatch repair protein [Clostridium botulinum E3 str. Alaska E43] gi|188498658|gb|ACD51794.1| DNA mismatch repair protein MutL [Clostridium botulinum E3 str. Alaska E43] Length = 676 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 175/677 (25%), Positives = 289/677 (42%), Gaps = 89/677 (13%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L+E N+IAAGE++ERP+ +KEL+EN++DA S + I GG S +I D+G Sbjct: 3 RINILNEDTANKIAAGEVVERPASVVKELVENAIDANSKNILIEIEEGGSSLIRIIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+I A H TSKI + D +I+T GFRGEALPSI +VS + L ++ G Sbjct: 63 GIYKEDIEKAFLPHATSKIKEPEDIYSINTLGFRGEALPSIASVSKVNLKTKQETEECGY 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G K S V +N GTI+EVRDLFF +PAR FLK+ E++LI D+I R+A++ Sbjct: 123 EITIEGGKFSEVTECGVNKGTIMEVRDLFFNVPARKKFLKTTSKESSLINDIITRIALSN 182 Query: 180 PKVSFTFSTI----------KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN 229 P +SF + + + + D + ++ Sbjct: 183 PNISFKLFNNGKKIIHTYGNGNMKDVIRTIYGKSIVENILYFEDTCDIATIYGYVGKEDI 242 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 + I +R N+ + Q ST+ + + YP + + Sbjct: 243 ARGSRNNQSIFVNSRYIKNR---SLGIAVEQAFKSFSTVSKFPFFILFIEIYPEY-IDVN 298 Query: 290 IDP--RQVDVN------------VHPAKSYIRF--------RNPTIIR------NFIIQS 321 I P +V N VH + F I+ I Sbjct: 299 IHPTKSEVKFNDERFIFKRIFSAVHTSLKEEVFNTFSIPEEEKEATIKNSNLNIEEITFK 358 Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDNAPKT---------------------------- 353 I++ K ++T+ + K + S+F ++ K Sbjct: 359 IEEEQEKVKLNTNHLSQKNICSTFEDNSINKHIYDEKHKIDTDIYNNIPLNVNIPVDLKC 418 Query: 354 -HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA----------- 401 H+ + +N+ +++ + + S Y ++E+ Sbjct: 419 DHIRLEEDNNSNSNKQVISENSEAKYETFYTSKSDQYEHSYKCETDNESKLNVIETSDLV 478 Query: 402 ----THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + Q ++ YI+ + L ++DQHAAHE+++FEK D N I Q L Sbjct: 479 KEKIPKFPPIKIIGQYNKTYILGEYAGTLYMIDQHAAHEKIMFEKYLNDINCGDIIIQPL 538 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 + P +IDL + + E+ + G E FG +IA++E+P L K L +I+ Sbjct: 539 MIPTVIDLSMDDYSYFEENKDVFKEAGFTIEEFGGTSIALKEVPYFLGKLKPKNLFLEIL 598 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D + + + T + + I AT AC +++ + +EM +L+ E+ + C HGR Sbjct: 599 DNLKNLGSGKTTEVKYNAI-ATKACKSAVKGNDSLDELEMVKLIEELRYIDDPFHCPHGR 657 Query: 578 PTFIKLKLSDIEKLFGR 594 PT I+ +DI+K F R Sbjct: 658 PTIIQFTSTDIDKKFRR 674 >gi|283786849|ref|YP_003366714.1| DNA mismatch repair protein [Citrobacter rodentium ICC168] gi|282950303|emb|CBG89950.1| DNA mismatch repair protein [Citrobacter rodentium ICC168] Length = 621 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 161/609 (26%), Positives = 276/609 (45%), Gaps = 49/609 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I +++RR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKVVRQYRAVAQDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALAEIQYCYVNGRMMRDRLINHAIRQACEDRLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQRLEAPLPLATDDEPAPRQVPENRIAAGR 360 Query: 345 ---FHQDNAPKTHLPKYATSLT------------NTQEKLFLQENRLSTNDLLPSDDPTY 389 A +T P+YAT + + ++ LL + P Sbjct: 361 NHFAEPAQARETASPRYATPSAAGGGSRPASAAWPHAQPGYQKQQGEVYRQLLQTPVPAS 420 Query: 390 SEDNDPVEES----EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 + E E G I + + + + ++ A L ++ Sbjct: 421 ASKTPAAEAPAPALEGHSQSFGRVLTIIAHDCALLERDGQIQLLALPVAERWLRQAQLMP 480 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 ++ +Q LL P + + E A + + + L LGI+ + + +R +P L Sbjct: 481 --GQGQVCAQPLLIPLRLKVTADEKAALEKARDTLTALGIEFQS-DAQHVTVRAVPLPLR 537 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 ++++ L+ ++I + S ++ + + + LL ++E Sbjct: 538 QQSLQNLIPELIGYLTQKSAPEPDTLARWIARNLLSEHA------QWTMAQAITLLADVE 591 Query: 566 KNPNSSQCN 574 + C Sbjct: 592 RL-----CP 595 >gi|297622075|ref|YP_003710212.1| putative DNA mismatch repair protein mutL [Waddlia chondrophila WSU 86-1044] gi|297377376|gb|ADI39206.1| putative DNA mismatch repair protein mutL [Waddlia chondrophila WSU 86-1044] Length = 582 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 178/596 (29%), Positives = 289/596 (48%), Gaps = 24/596 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L E+ INQIAAGE++E P+ +KEL ENSLDA ++ + I GG+ +ITDNG Sbjct: 4 KIQVLDEQTINQIAAGEVVENPASVVKELAENSLDAGATEITAEIRAGGRQLIRITDNGA 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E+ ++++RH TSKI +D +++T GFRGEA+PSI ++S LT+++R + G Sbjct: 64 GMSGEDALLSLERHATSKIRGIEDLYDVYTMGFRGEAVPSIASISKLTILTRSVEEKKGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + G K+ PV +PGT +EV LFF +P R F +S ++N + V+ +A+ Sbjct: 124 LIYVEGGKLLKNCPVERDPGTTMEVDSLFFNVPVRKKFQRSPTYDSNEVLKVLSMLALTR 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V FT + K +T G+F RI +V+G++F L+ + I L+G+ G+ Sbjct: 184 PDVKFTLISQGKTLLK----ATQGDFKRRIEEVLGKEFSCGLCPLSFEKEGIKLEGFVGL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +NR N Y+FINGR V I ++ Y + RYPV VL L I VDVNV Sbjct: 240 PYYNRHNRTGQYLFINGRAVFSPLISFAVKEGYGTAMGTHRYPVFVLRLSIPGSLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R R + I ++++KA++ I + + + ++ A Sbjct: 300 HPQKKEVRLRQEQQFKQLIAEAVEKALS-HEILPETTVETPLPFTYSPSLASLPDKVSIE 358 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 T++ + +P + P+ E+ + A + ++ Sbjct: 359 ERFYTTEDSAI---DFKEWMIREAESEPVETSKTAPLFPQESADAPPSV-LATVPGFILV 414 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + + L V AH R+++E + Q LL P D E A I EH E Sbjct: 415 QTSKEKLYWVSARNAHARVLYEAL-DKNYLPATQIQQLLIPLNFDFSPIEAAAIREHLEI 473 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT---LQDRIENI 536 L + G+ + FG N+ AI IP + + + LL I E ++S +Q + + Sbjct: 474 LEKWGLGIKEFGRNSFAIDAIPRLWDETKLEDLLHSIAKEAAETSKPERKLFVQTVVNSA 533 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 A + + + L+ ++ ++ N C G+PT ++ +I KLF Sbjct: 534 FAK---------DQMLSQAQAQALINQLHQSKNHRFCPLGKPTAAEILEEEIAKLF 580 >gi|215489514|ref|YP_002331945.1| DNA mismatch repair protein [Escherichia coli O127:H6 str. E2348/69] gi|254766165|sp|B7UQH9|MUTL_ECO27 RecName: Full=DNA mismatch repair protein mutL gi|215267586|emb|CAS12041.1| methyl-directed mismatch repair protein [Escherichia coli O127:H6 str. E2348/69] Length = 615 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 269/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 344 ----------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPLYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLELDGNISLLALPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|74314655|ref|YP_313074.1| DNA mismatch repair protein [Shigella sonnei Ss046] gi|187733395|ref|YP_001882861.1| DNA mismatch repair protein [Shigella boydii CDC 3083-94] gi|193070863|ref|ZP_03051795.1| DNA mismatch repair protein MutL [Escherichia coli E110019] gi|300920806|ref|ZP_07137207.1| DNA mismatch repair protein [Escherichia coli MS 115-1] gi|123732234|sp|Q3YUH3|MUTL_SHISS RecName: Full=DNA mismatch repair protein mutL gi|238691726|sp|B2TY45|MUTL_SHIB3 RecName: Full=DNA mismatch repair protein mutL gi|73858132|gb|AAZ90839.1| enzyme in methyl-directed mismatch repair [Shigella sonnei Ss046] gi|187430387|gb|ACD09661.1| DNA mismatch repair protein MutL [Shigella boydii CDC 3083-94] gi|192955809|gb|EDV86280.1| DNA mismatch repair protein MutL [Escherichia coli E110019] gi|300412229|gb|EFJ95539.1| DNA mismatch repair protein [Escherichia coli MS 115-1] gi|320173676|gb|EFW48866.1| DNA mismatch repair protein MutL [Shigella dysenteriae CDC 74-1112] gi|320187048|gb|EFW61759.1| DNA mismatch repair protein MutL [Shigella flexneri CDC 796-83] gi|323166652|gb|EFZ52410.1| DNA mismatch repair protein mutL [Shigella sonnei 53G] gi|332087043|gb|EGI92177.1| DNA mismatch repair protein mutL [Shigella boydii 3594-74] Length = 615 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 270/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP-----------SDDPTYSE 391 F + A + P+Y + + N + Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKLKA 420 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 A G +H + + + + ++ A L +++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLR--QVQLTPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|238750069|ref|ZP_04611572.1| DNA mismatch repair protein mutL [Yersinia rohdei ATCC 43380] gi|238711613|gb|EEQ03828.1| DNA mismatch repair protein mutL [Yersinia rohdei ATCC 43380] Length = 632 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 158/585 (27%), Positives = 268/585 (45%), Gaps = 55/585 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR Q N Sbjct: 61 CGISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAQQNEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +++P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + R++ + G F+ A+ ++ + ++T++G+ Sbjct: 181 ARFDVAINLSHNGKLMRQYRAATDPSQHERRLASICGPAFLQQALAISWQHGDLTIRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++N R ++D+ I IR AY + + + P VL L+IDP QVDV Sbjct: 241 ADPAASRTLSEMQYCYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV--------------------- 336 NVHPAK +RF ++ +FI Q++ + + ++ Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTTVLQQAATPVLNINEDGEEIEAPRWQPENRVAAG 360 Query: 337 ---LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 ++ + ++ P A T T E+LF +E+ + N P Sbjct: 361 GNKYAQPEPAKAPREERTAAPEPASAVGRTATTERLFAREHAPAYNAGQPYQKQQGELYR 420 Query: 394 DPV-------------------EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAA 434 V E +Y G Y + + GL ++ A Sbjct: 421 QLVQPVTEMTASAPKARQLPVEEPLHGDNYSFGRVLTVFPPCYALLEYKQGLALLALPVA 480 Query: 435 HERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA 494 L ++ + Q LL P + L + E A H + L +GI+ Sbjct: 481 ERGLKQAQLNPPTE--GLRPQPLLIPLKLTLNKDEAAACQRHQKLLALMGIEL-AVEHTT 537 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 +R + L ++N+ +L+ +++ + + LAT Sbjct: 538 ATLRAVSLPLRQQNLQKLIPELLGYLSQHEEISP------DALAT 576 >gi|218551440|ref|YP_002385232.1| DNA mismatch repair protein [Escherichia fergusonii ATCC 35469] gi|226723038|sp|B7LLV2|MUTL_ESCF3 RecName: Full=DNA mismatch repair protein mutL gi|218358982|emb|CAQ91642.1| methyl-directed mismatch repair protein [Escherichia fergusonii ATCC 35469] Length = 615 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 164/605 (27%), Positives = 276/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTVDQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ +A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEHALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPTLAEIQYCYVNGRMMRDRLINHAIRQACENKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRTIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYSPAPASGGRPAASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ T Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQL--TPGETP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQYVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|82546589|ref|YP_410536.1| DNA mismatch repair protein [Shigella boydii Sb227] gi|123728278|sp|Q31TA0|MUTL_SHIBS RecName: Full=DNA mismatch repair protein mutL gi|81248000|gb|ABB68708.1| enzyme in methyl-directed mismatch repair [Shigella boydii Sb227] Length = 615 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 160/605 (26%), Positives = 269/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E + I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFSHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP-----------SDDPTYSE 391 F + A + P+Y + + N + Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKLKA 420 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 A G +H + + + + ++ A L +++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLR--QVQLTPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|222035940|emb|CAP78685.1| DNA mismatch repair protein mutL [Escherichia coli LF82] Length = 615 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 275/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKGELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYSPAPASGSRPAASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEVP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|167752896|ref|ZP_02425023.1| hypothetical protein ALIPUT_01158 [Alistipes putredinis DSM 17216] gi|167659965|gb|EDS04095.1| hypothetical protein ALIPUT_01158 [Alistipes putredinis DSM 17216] Length = 629 Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats. Identities = 172/627 (27%), Positives = 280/627 (44%), Gaps = 46/627 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E + NQIAAGE++ RPS +KE++EN++DA + V+ GGK QI D+G Sbjct: 4 RIKLLPEVVANQIAAGEVVNRPSSVVKEMMENAIDAGARSVKVNFRDGGKELIQIVDDGC 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ + MA RH TSKIS DD + TFGFRGEAL SI AVS + L +R ++ G Sbjct: 64 GMSPIDARMAFDRHATSKISSLDDIYALKTFGFRGEALASIAAVSQVELRTRQAEDEVGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++G + S A G+ VR+LF+ +PAR FL+ T I +R+A+ Sbjct: 124 LTTVNGGEFVSQTLAACPVGSQFYVRNLFYNVPARRKFLEKSTTSTGQIKSEFQRVALCN 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V F Y++ + RI V+G N +E++ ++ + + G+ G Sbjct: 184 PQVGFELLMNDQPLYRLPA----ASLASRIVDVVGRHIKQNLLEVDADTSIVRVTGFVGR 239 Query: 240 PTFNRG-NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P + N+++ Y+F+NGR + + I AY + IP P L L IDP ++DVN Sbjct: 240 PAAAKKSNSSEQYLFVNGRYFRSPYFFKAILKAYEKLIPDACSPSYFLYLTIDPSRIDVN 299 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-----------SSVLSKKMISSFHQ 347 VHP K+ ++F + + I ++++ + K G VL+K + + Sbjct: 300 VHPQKTEVKFADEEAVWQIINAAVRETLAKTGAVPLMDFDQTDSVEIPVLTKGAVYREPK 359 Query: 348 DNAPKTHLPKYATSLTNTQEKLF--------------------------LQENRLSTNDL 381 + +++ P A ++ E++ E S Sbjct: 360 AMSNESYNPFRADYASDVSERMPDVDFSGFDAPYDGEMPAGKGVGAEDRYDEMIPSAGFA 419 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 + S + + Y + V+VD A ER++++ Sbjct: 420 PTEMEFIPSAGEPVQQRLMDDPAACFSGVTVLGNGYASALYGGKWVVVDLRRARERVLYD 479 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 + SQ LL PE + E E AL+ E+ D LG E G A+ ++ +P Sbjct: 480 NYLLLLTNGSSVSQQLLFPERLAFSENEYALLEENAVDFAALGFDLEFCGGGAVEVKGVP 539 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 A + I +L+ +++ E L R E I A MAC G+ R + + E LL Sbjct: 540 ADIPHDTIDRLIYELLQEFAVPVDVQAL--RREKIAAVMACSGARSMSRTISTEEAESLL 597 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDI 588 ++ + N S G+ K+ L +I Sbjct: 598 GQLCEGGNVSFTPSGKAVMAKITLEEI 624 >gi|170021820|ref|YP_001726774.1| DNA mismatch repair protein [Escherichia coli ATCC 8739] gi|189030398|sp|B1IT36|MUTL_ECOLC RecName: Full=DNA mismatch repair protein mutL gi|169756748|gb|ACA79447.1| DNA mismatch repair protein MutL [Escherichia coli ATCC 8739] gi|269852787|gb|ACZ50723.1| MutL [Escherichia coli] Length = 615 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 164/605 (27%), Positives = 276/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKIIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + A + P+Y + + + + ++ LL + P Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALSVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|259907176|ref|YP_002647532.1| DNA mismatch repair protein [Erwinia pyrifoliae Ep1/96] gi|224962798|emb|CAX54255.1| DNA mismatch repair protein [Erwinia pyrifoliae Ep1/96] gi|283476984|emb|CAY72876.1| DNA mismatch repair protein mutL [Erwinia pyrifoliae DSM 12163] Length = 608 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 160/545 (29%), Positives = 269/545 (49%), Gaps = 25/545 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MLIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ MA+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIDKDELAMALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTEAQSEA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q ++ +V+P A GT +EV DLF+ PAR F+++E+ E I ++IRR+A+ Sbjct: 121 WQAYAEGRDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + S + S +G R+ + G F+ +A+++ + +E++L G+ Sbjct: 181 ARFDVAISLSHNGKLVRQYRAVSDDGQRERRLGAICGTAFLTHALKIAWQHSELSLHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P ++ + Y ++NGR ++D+ I IR AY + + P VL LEIDP QVDV Sbjct: 241 ADPVGSKALSELQYCYVNGRMMRDRLINHAIRQAYQDKLGDRHQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-SSVLSKKMISSFHQDNAPKTHLP 356 NVHPAK +RF ++ +FI Q + + + G+ T + + + +N Sbjct: 301 NVHPAKHEVRFHQSRLVHDFIYQGVISVLQESGVETLPEIATVQPAEHRQPENRQAAGGN 360 Query: 357 KYATSLT-------------NTQEKLFLQENRLSTNDLLP-----SDDPTYSEDNDPVEE 398 ++T QE L+ + LL + P S + Sbjct: 361 HFSTPAAAAPRPASPGGGSWQRQEPLYQKREGAVYQQLLQTPARSEEPPPASAAPNKEPP 420 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 + G + + Y + + +GL ++ A L ++ + S + Q LL Sbjct: 421 LSGHTHSFGRVLTVVQERYALLEGKNGLALLALAVAARWLKQAQL--EPGSEGLKPQPLL 478 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P + L + E L+++GI +F + + +R +P L ++N+ L+ +++ Sbjct: 479 IPLRLKLDKAERDAGSRCSALLNQMGIDL-QFDAHHVMLRAVPLPLRQQNLQNLIPEMLG 537 Query: 519 EIIDS 523 + Sbjct: 538 YLTRH 542 >gi|324112233|gb|EGC06211.1| DNA mismatch repair protein MutL [Escherichia fergusonii B253] Length = 615 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGVKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ +A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEHALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPTLAEIQYCYVNGRMMRDRLINHAIRQACENKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQARLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRTIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYSPAPASGGRPAASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G + + + + ++++ A L ++ T Sbjct: 421 PEPQEPALAANSQSFGRVLTIVQSDCALLERDGNILLLALPVAERWLRQAQL--TPGETP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQYVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|325499706|gb|EGC97565.1| DNA mismatch repair protein [Escherichia fergusonii ECD227] Length = 615 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 163/605 (26%), Positives = 277/605 (45%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ +A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEHALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPTLAEIQYCYVNGRMMRDRLINHAIRQACENKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRTIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F + + P+Y+ + + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYSPAPASGGRPAASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G + + + + ++++ A L ++ T Sbjct: 421 PEPQEPALAANSQSFGRVLTIVQSDCALLERDGNILLLALPVAERWLRQAQL--TPGETP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQYVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|300715038|ref|YP_003739841.1| DNA mismatch repair protein [Erwinia billingiae Eb661] gi|299060874|emb|CAX57981.1| DNA mismatch repair protein [Erwinia billingiae Eb661] Length = 627 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 164/615 (26%), Positives = 282/615 (45%), Gaps = 55/615 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ MA+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIGKDELSMALARHATSKITTLDDLEAIVSLGFRGEALASISSVSRLTLTSRTEAQAEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +P A GT +EV DLF+ PAR F+++E+ E I ++IRR+A+ Sbjct: 121 WQAYAEGRDMAVTLKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+F+ + + + + R+ + G F+++A+ + + +++L+G+ Sbjct: 181 ARFDVAFSLTHNGKLMRQYRGVADHSQRERRLGAICGTAFLSHALAIEWQHGDLSLKGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++NGR ++D+ I IR AY + + P VL LEIDP QVDV Sbjct: 241 ADPVGSRAITDLQYCYVNGRMMRDRLINHAIRQAYQDKLGDSHQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-SSVLSKKMISSFHQDNAPKTHLP 356 NVHPAK +RF ++ +FI Q + + + G T V + +N Sbjct: 301 NVHPAKHEVRFHQSRLVHDFIYQGVVSVLQEAGAETLPDVEPAAPAERWQPENRQAAGGN 360 Query: 357 KYATSLTN-------------------------------TQEKLFLQENRLSTNDLLPSD 385 ++T + QE ++ + + L+ + Sbjct: 361 HFSTPAPSKIPSGKSHTAGHSPAASTSGGGAGAGSSHWQRQEPIYQPQEGKAYQQLMRTP 420 Query: 386 DPTYSEDNDPVEESE------ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 D + + E G + I N+ + + + L +++ A Sbjct: 421 DVPVAREPSKQGERSTELPLSGHSQSFGRVLSVIRDNFALVEGQERLALINLPVAA--HW 478 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 ++ + + + Q LL P + + + E I H L ++GI+ + + + +R Sbjct: 479 LKQAQLEPGEEGLKPQPLLIPVRVKMDKPEREAITHHASLLIQMGIEL-QADSHHVTLRA 537 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 +P L ++N+ L+ +++ + Q + LA S+ + Sbjct: 538 VPLPLRQQNLQNLIPELLGYLARQQDVSATQ--VAQWLA----RHSVVEHPHWNHSQAIT 591 Query: 560 LLREMEKNPNSSQCN 574 LL E+E+ C Sbjct: 592 LLAEVERL-----CP 601 >gi|329666838|gb|AEB92786.1| DNA mismatch repair protein MutL [Lactobacillus johnsonii DPC 6026] Length = 630 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 183/635 (28%), Positives = 292/635 (45%), Gaps = 53/635 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS ++ NQIAAGE+IERP+ +KEL ENSLDA S R+ G + DNG Sbjct: 3 KIHELSPELTNQIAAGEVIERPASVVKELCENSLDAGSKRIRIDFIDAGLKQITVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A RH TSKI+ D NI T GFRGEAL SI AVSH+ + + N G Sbjct: 63 GIAKDQIDLAFTRHATSKIATERDLFNISTLGFRGEALASIAAVSHVEVRT-SNDNLGGV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG + A GT + V DLFF PARL +L+SE+ E I D++ R+++ + Sbjct: 122 RAIFSGSEKKLQEDAASPKGTKITVSDLFFNTPARLKYLRSERTEILKIVDIVNRLSLGH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT + + + + + I+ + G L KS + + G Sbjct: 182 PDVSFTLTNNGK---VLLKTNGRDDLRQDIANIYGRQLAEKMNILKGKSPDFEISGLISD 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + +NGR +++ + I Y + RYP+ V+ +E+DP VDVNV Sbjct: 239 PNTTRSNRNFISLLLNGRYIKNYRLTQAIMAGYGNKLRPRRYPIAVVKIELDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-----------------------SV 336 HP K +R + + SI +A+ + S V Sbjct: 299 HPTKQEVRLSKEQELERLLTTSISEALEQNNQIDSGLNNLLAPKKSTNIDQLKFNLNKDV 358 Query: 337 LSKKMISSFHQDNAPKTHLPKYATS----------------LTNTQEKLFLQENRLSTND 380 ++ F P + T+ +T+T + Q+ +LS D Sbjct: 359 VNTARPVEFTPQVEPDQSAEVHETAANFVSLDQVRNDDKYVITSTWDDNVNQQVQLSPFD 418 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 +E A + Q ++Y+I+ + L ++DQ A+ RL + Sbjct: 419 EEKDMQGKDDSIISSGDEILANNLPELTYMGQT-KSYLIAHHEEDLYLIDQVNAYRRLAY 477 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 +++ QD NS I+ Q LL+P I+D + + E+ E+L G+ E FG N++ +R Sbjct: 478 DQILQDLNSENISQQGLLSPLILDFSNVDYLKLKENLENLQEFGLFLEDFGQNSLILRTY 537 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL--ATMACYGSIRSGRKMQSIEMN 558 P L + ++ + +R I+D ++ T + + I TM S R R + +E Sbjct: 538 PMWL-QPDVEKNVRMILDLYLNQ-TEHDISKLKAQIAGEITM--RQSARR-RMLNPVEAQ 592 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 LL+E+ + + Q G+ I+L +D+ K+F Sbjct: 593 ELLKELRNSSDPYQDFEGKIIIIQLSENDLNKMFK 627 >gi|15804759|ref|NP_290800.1| DNA mismatch repair protein [Escherichia coli O157:H7 EDL933] gi|15834400|ref|NP_313173.1| DNA mismatch repair protein [Escherichia coli O157:H7 str. Sakai] gi|217326011|ref|ZP_03442095.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. TW14588] gi|20455084|sp|Q8XDN4|MUTL_ECO57 RecName: Full=DNA mismatch repair protein mutL gi|12519155|gb|AAG59366.1|AE005650_5 enzyme in methyl-directed mismatch repair [Escherichia coli O157:H7 str. EDL933] gi|13364623|dbj|BAB38569.1| enzyme in methyl-directed mismatch repair [Escherichia coli O157:H7 str. Sakai] gi|209750300|gb|ACI73457.1| enzyme in methyl-directed mismatch repair [Escherichia coli] gi|217322232|gb|EEC30656.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. TW14588] gi|326346645|gb|EGD70379.1| DNA mismatch repair protein MutL [Escherichia coli O157:H7 str. 1044] Length = 615 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 269/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH---------- 346 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRPIPENRVAAGR 360 Query: 347 -------------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L +++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLR--QVQLTPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMS------ENAQWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|303246676|ref|ZP_07332954.1| DNA mismatch repair protein MutL [Desulfovibrio fructosovorans JJ] gi|302492016|gb|EFL51894.1| DNA mismatch repair protein MutL [Desulfovibrio fructosovorans JJ] Length = 669 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 181/671 (26%), Positives = 288/671 (42%), Gaps = 90/671 (13%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R+E I GGG++ + D+G+ Sbjct: 9 TIRVLPPELQNQIAAGEVVERPASVLKELVENSLDAGATRIEVSIDGGGRTAMVVADDGW 68 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT EE+ +AV RH TSKI ++ ++I +FGFRGEALPSI +VS TL SR + GA Sbjct: 69 GMTPEELSLAVTRHATSKIVSMEELTSIASFGFRGEALPSIASVSRFTLTSRHEAFDEGA 128 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + +I P A+ GT +EVRDLF +PARL FLKSE VET T+ R A+A Sbjct: 129 VIRVESGRIVEEGPAALARGTRIEVRDLFAAVPARLKFLKSEAVETKRATEAFSRAALAR 188 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V+F S + + R+ + E++ I +QG G Sbjct: 189 LDVAFKLSVNGRTTLRFPA---SQTLAARLGGIWPPAVTEGLFEVDYALGPIRVQGLIGK 245 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + A++ ++NGR VQD+ +LS +R AY + YP V L + + P +DVNV Sbjct: 246 PLSAQSRADRMLFYVNGRAVQDRLLLSAVREAYKGRLLSREYPQVALFVTLPPEDLDVNV 305 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN-------------------------------- 327 HPAK+ +RFR+ ++ + +++ +A++ Sbjct: 306 HPAKTEVRFRDEQVVFLNLRRAVGQALDKALVLRTVPAPEPWVKQSGGEPPKFATRRDFL 365 Query: 328 ---------KKGISTSSVLSKKMISSFHQDNAPKTHLPKYA------------------- 359 + G +T + + H P A Sbjct: 366 DELVRADAPQPGQTTPATPIVREGPPVHPMGQEAQDAPAPAATPYQAVAENRRHGQPAPV 425 Query: 360 ----TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI-- 413 E+ Q + SD+ T ++ ++ Sbjct: 426 RHLEPPAVVRHERQLAQAGEPESPPTGGSDEATSPAESRYAAPEAQPEILHARRPEELEP 485 Query: 414 ---HQNYIISQTTDGLVIVDQHA----AHERLIFEKMR---QDFNSTKITSQTLLTPEII 463 + Q D +IVD + E++ + ++ S+ + P + Sbjct: 486 SLPPGVRYLGQFADTYLIVDLGRELVLLDQHAAHERIIYAAMEATGSRGDSRPVGIPVEL 545 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 L E + E +L +G E P ++I P LS + LR + Sbjct: 546 TLHPAEQTRLQELHNELRAIGFALESPRPGTVSITGAPPGLSLGQAKEYLRAALA----- 600 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + TL ++ M+C +I++G ++ E LL + K P C HGRP ++ Sbjct: 601 GQSKTL----HDLWILMSCKTAIKAGTRLADDEAVALLAQWSKTPERDYCPHGRPVTVRF 656 Query: 584 KLSDIEKLFGR 594 ++EK+F R Sbjct: 657 GQREMEKMFKR 667 >gi|297517572|ref|ZP_06935958.1| DNA mismatch repair protein [Escherichia coli OP50] Length = 615 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 268/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP-----------SDDPTYSE 391 F + A + P+Y + + N + Sbjct: 361 NHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKLKA 420 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ + I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPERIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|194434572|ref|ZP_03066829.1| DNA mismatch repair protein MutL [Shigella dysenteriae 1012] gi|194417157|gb|EDX33269.1| DNA mismatch repair protein MutL [Shigella dysenteriae 1012] gi|320180683|gb|EFW55610.1| DNA mismatch repair protein MutL [Shigella boydii ATCC 9905] gi|332083768|gb|EGI88986.1| DNA mismatch repair protein mutL [Shigella dysenteriae 155-74] Length = 615 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 162/605 (26%), Positives = 272/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+EN LDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENCLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD------DPTYSEDNDPV 396 F + A + P+Y+ + + N + V Sbjct: 361 NHFAEPAAREPVAPRYSPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKV 420 Query: 397 EESE-----ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 E + A G +H + + + + ++ A L +++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLR--QVQLTPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|329297959|ref|ZP_08255295.1| DNA mismatch repair protein [Plautia stali symbiont] Length = 619 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 163/610 (26%), Positives = 267/610 (43%), Gaps = 51/610 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R+E I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIEVDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ MA+ RH TSKI+ DD I + GFRGEAL SI +VS L L SR Sbjct: 61 CGIARDELAMALARHATSKIASLDDLEAIVSLGFRGEALASISSVSRLKLTSRTADQQEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +P A GT +EV DLF+ PAR F+++E+ E I +VIRR+A+ Sbjct: 121 WQAYAEGRDMAVTVKPAAHPVGTSLEVLDLFYNTPARRKFMRTEKTEFTHINEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + + + + R+ + G F+ +A+ ++ + +++ L+G+ Sbjct: 181 ARFDVAISLTHNGKLVRQYRGVTQEAQRERRLGAICGTPFMQHALRIDWQHDDLALRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++NGR ++DK I IR AY + + P VL LEIDP QVDV Sbjct: 241 ADPAGSRQVTDLQYCYVNGRMMRDKLINHAIRQAYQTQLGEDQQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-------- 349 NVHPAK +RF ++ +FI Q + + + + + Q Sbjct: 301 NVHPAKHEVRFHQSRLVHDFIWQGVMSVLQASRSAELPLAHAEEPPPQWQPENRQAAGAN 360 Query: 350 ----------------------APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + P Y ++L + P Sbjct: 361 HFAQPATGARSGGSAASGGTGGQWQPKEPGYRAREGAVYQQLIKTPAAETPRAAATEPAP 420 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 A G + + + Y + + + L ++ A L +++ Sbjct: 421 APRPAPAREAPLAAHTQSFGRVLSVVRERYALLECGETLQLLSLSVAARWLKQAQLQP-- 478 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + Q LL P + + E ++I L ++GI +R G + + +R +P L + Sbjct: 479 GEEGLKPQPLLIPVRLKIAHEELSVIDAQAALLSQMGIDLQRKGQH-VTLRAVPLPLRTQ 537 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATM--ACYGSIRSGRKMQSIEMNRLLREME 565 N+ L+ D++ + + LA A + + LL E+E Sbjct: 538 NLQILIPDLLGYLARQQEVSA--SALAQWLARRDDA------AEPHWNHSQAITLLAELE 589 Query: 566 KNPNSSQCNH 575 + C H Sbjct: 590 RL-----CPH 594 >gi|331681189|ref|ZP_08381826.1| DNA mismatch repair protein MutL [Escherichia coli H299] gi|331081410|gb|EGI52571.1| DNA mismatch repair protein MutL [Escherichia coli H299] Length = 615 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 269/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRIAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 344 ----------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|108761749|ref|YP_632205.1| DNA mismatch repair protein MutL [Myxococcus xanthus DK 1622] gi|123374404|sp|Q1D568|MUTL_MYXXD RecName: Full=DNA mismatch repair protein mutL gi|108465629|gb|ABF90814.1| DNA mismatch repair protein MutL [Myxococcus xanthus DK 1622] Length = 619 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 165/620 (26%), Positives = 278/620 (44%), Gaps = 35/620 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +LS+ +IN+IAAGE++ERP+ +KEL+EN++DA + V + GGG ++D+G Sbjct: 3 RIARLSDVLINKIAAGEVVERPASVVKELVENAIDAGAGTVRVELDGGGVDRIIVSDDGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + ++RH TSK+ DD +I + GFRGEA+P+I +VS TL S + G Sbjct: 63 GMGRSDAVACLERHATSKLRELDDLFHIDSMGFRGEAIPAIASVSRFTLHSAAANSEVGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++++ G V GT++ V DLFF +PAR FL+ E + + R+A+AY Sbjct: 123 RVSVEGGGPPLVEDAPPRTGTVMTVEDLFFNVPARRKFLRRGDTELKHAEEAVVRLALAY 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V F S + + ERI+ +G + + E+ + + G+ Sbjct: 183 PEVGFFASHEGGTLFSSAACP--DDPRERIAAALGSTSHPHLFPVEERRLGVAVTGFAAS 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F NA Y F+N R ++D+ ++ TI+ AY + + GR PVVVL +++DPR VDVNV Sbjct: 241 PEFTFNNARGLYTFVNRRYIRDRGLIGTIQRAYQDFLAAGRQPVVVLHIDVDPRAVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RF + ++ + ++ + + S V + D A H + Sbjct: 301 HPQKQEVRFADARGVQEALTAALSRMLRAAPWLGSGVEGAAPQAGQPMDAAHYAHAVERF 360 Query: 360 TSLTNTQEKLF--------------------------LQENRLSTNDLLPSDDPTYSEDN 393 LT QE + + L + Sbjct: 361 --LTRAQEAAWGGPLPTAMDAPGPGPGAPSLGPLGQGARPGALPFAAAVGQAPAFGQAQP 418 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKI 452 E ++ + + + + G LV++D HAA ER + S K Sbjct: 419 QLNEAPPPGYFGALRPLGMLGGRFHVCEGPGGTLVVMDPHAALERARLTGYLRALESGKP 478 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 L ++L ++E E L RLG E FG +A++ +P L + L Sbjct: 479 PPAPTLFGTTLELPVAAAKALVEGREALSRLGFDVEPFGGTTVALKTVPPGLEGADARSL 538 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR-KMQSIEMNRLLREMEKNPNSS 571 L + + S T E + MAC+ + ++G + + LL E+++ Sbjct: 539 LEALARALPPKSATLDTVSLAEAVRV-MACHAAKQAGAVPLSDAQFRALLGELDRADFHP 597 Query: 572 QCNHGRPTFIKLKLSDIEKL 591 C+HG +++ L ++E+ Sbjct: 598 TCSHGTVVVLEMPLLELERR 617 >gi|227888713|ref|ZP_04006518.1| DNA mismatch repair protein MutL [Lactobacillus johnsonii ATCC 33200] gi|227850740|gb|EEJ60826.1| DNA mismatch repair protein MutL [Lactobacillus johnsonii ATCC 33200] Length = 630 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 186/635 (29%), Positives = 292/635 (45%), Gaps = 53/635 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS ++ NQIAAGE+IERP+ +KEL ENSLDA S R+ G + DNG Sbjct: 3 KIHELSPELTNQIAAGEVIERPASVVKELCENSLDAGSKRIRIDFIDAGLKQITVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A RH TSKI+ D NI T GFRGEAL SI AVSH+ + + N G Sbjct: 63 GIAKDQIDLAFTRHATSKIATERDLFNISTLGFRGEALASIAAVSHVEVTTN-NDNLGGV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG + A GT + V DLFF PARL +L+SE+ E I D++ R+A+ + Sbjct: 122 RAIFSGSEKKLQEDAASPKGTKITVSDLFFNTPARLKYLRSERTEILKIVDIVNRLALGH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT + K N + + I+ + G L KS + + G Sbjct: 182 PDVSFTLTNNGKILLKTN---GRDDLRQDIANIYGRQLAEKMDILKGKSPDFEISGLISD 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + +NGR +++ + I Y + RYP+ V+ +E+DP VDVNV Sbjct: 239 PNTTRSNRNFISLLLNGRYIKNYRLTQAIMAGYGNKLRPRRYPIAVVKIELDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-----------------------SV 336 HP K +R + + SI +A+ + S V Sbjct: 299 HPTKQEVRLSKEQELERLLTTSISEALEQNNQIDSGLNNLLAPKKSTNIDQLKFNLNKDV 358 Query: 337 LSKKMISSFHQDNAPKTHLPKYATS----------------LTNTQEKLFLQENRLSTND 380 ++ F P + T+ +T+T + Q+ +LS D Sbjct: 359 VNTARPVEFTPRVEPDQSAEVHETAADFVSLDQVRNDDKYVITSTWDDNVDQQIQLSPFD 418 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 +E A + Q ++Y+I+ + L ++DQ A+ RL + Sbjct: 419 EEKDIQGKDDSIILSGDEILANNLPELTYMGQT-KSYLIAHHEEDLYLIDQVNAYRRLAY 477 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 +++ QD NS I+ Q LL+P I+D + + E+ E+L G+ E FG N++ +R Sbjct: 478 DQILQDLNSENISQQGLLSPLILDFSNVDYLKLKENLENLQEFGLFLEDFGQNSLILRTY 537 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL--ATMACYGSIRSGRKMQSIEMN 558 P L + ++ + +R I+D ++ T + + I TM S R R + +E Sbjct: 538 PMWL-QPDVEKNVRMILDLYLNQ-TEHDISKLKAQIAGEITM--RQSARR-RMLNPVEAQ 592 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 LL+E+ + + Q G+ I+L +D+ K+F Sbjct: 593 ELLKELRNSSDPYQDFEGKIIIIQLSKNDLNKMFK 627 >gi|268318973|ref|YP_003292629.1| DNA mismatch repair protein MutL [Lactobacillus johnsonii FI9785] gi|262397348|emb|CAX66362.1| DNA mismatch repair protein MutL [Lactobacillus johnsonii FI9785] Length = 630 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 180/633 (28%), Positives = 290/633 (45%), Gaps = 49/633 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS ++ NQIAAGE+IERP+ +KEL ENSLDA S R+ G + DNG Sbjct: 3 KIHELSPELTNQIAAGEVIERPASVVKELCENSLDAGSKRIRIDFIDAGLKQITVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A RH TSKI+ D NI T GFRGEAL SI AVSH+ + + N G Sbjct: 63 GIAKDQIDLAFTRHATSKIATERDLFNISTLGFRGEALASIAAVSHVEVTT-SNDNLGGV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + SG + A GT + V DLFF PARL +L+SE+ E I D++ R+A+ + Sbjct: 122 RAIFSGSEKKLQEDAASPKGTKITVSDLFFNTPARLKYLRSERTEILKIVDIVNRLALGH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT + + + + + I+ + G L KS + + G Sbjct: 182 PDVSFTLTNNGK---VLLKTNGRDDLRQDIANIYGRQLAEKMDILKGKSPDFKISGLISD 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + +NGR +++ + I Y + RYP+ V+ +E+DP VDVNV Sbjct: 239 PNTTRSNRNFISLLLNGRYIKNYRLTQAIMAGYGNKLRPRRYPIAVVKIELDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS------------------------- 334 HP K +R + + SI +A+ + S Sbjct: 299 HPTKQEVRLSKEQELERLLTTSISEALEQNNQIDSGLNNLLAPKESTNIDQLKFNLNKDV 358 Query: 335 ----------SVLSKKMISSFHQDNAPKTHLPKYATS----LTNTQEKLFLQENRLSTND 380 + + H+ A L + +T+T + Q+ +LS D Sbjct: 359 VNTARPVEFIPRVEPDQSAEVHETAANFVSLDQVRNDDKYVITSTWDDNVDQQIQLSPFD 418 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 +E A + Q ++Y+I+ + L ++DQ A+ RL + Sbjct: 419 EEKDIQGKDDSIIPSGDEILANNLPELTYMGQT-KSYLIAHHEEDLYLIDQVNAYRRLAY 477 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 +++ +D NS I+ Q LL+P I+D + + E+ E+L G+ E FG N++ +R Sbjct: 478 DQILKDLNSKNISQQGLLSPLILDFSNVDYLKLKENLENLQEFGLFLEDFGQNSLILRTY 537 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 P L + ++ + +R I+D ++ T + + I + S R R + +E L Sbjct: 538 PMWL-QPDVEKNIRMILDLYLNQ-TEHDISKLKAQIAGEITVRQSSRR-RMLNPVEAQEL 594 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 L+E+ + + Q G+ I+L +D+ K+F Sbjct: 595 LKELRNSSDPYQDFEGKIIIIQLSENDLNKMFK 627 >gi|238787537|ref|ZP_04631335.1| DNA mismatch repair protein mutL [Yersinia frederiksenii ATCC 33641] gi|238724324|gb|EEQ15966.1| DNA mismatch repair protein mutL [Yersinia frederiksenii ATCC 33641] Length = 642 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 160/632 (25%), Positives = 279/632 (44%), Gaps = 74/632 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR Q N Sbjct: 61 CGISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLMLTSRTAQQNEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A G+ VEV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTVEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S R++ + G F+ +A+ ++ + ++T++G+ Sbjct: 181 ARFDVAINLSHNGKLMRHYRAAPDPSQHERRLASICGPAFLQHALAISWQHGDLTIRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++N R ++D+ I IR AY + + + P VL L+IDP QVDV Sbjct: 241 ADPAASRTLSEMQYCYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINK-----------------KGISTSSVLSKK 340 NVHPAK +RF ++ +FI Q++ + + + ++ Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTTVLQQAATPVLNINEDGEEIEAPRWQPENRVAAG 360 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 + ++ + +S T E+ E ++T + P ++ + Sbjct: 361 VNKYAQPESTIAQPAERPPSSPTRPAERAASAEQSITTGRSSAREHIPAYHPGQPYQKQQ 420 Query: 401 ------------------------------------ATHYQLGIACAQIHQNYIISQTTD 424 Y G Y + + Sbjct: 421 GELYRQLVQPAAENKPVDTLTLAPVIRQIPAEEPLNGDSYSFGRVLTVFPPCYALIEYKQ 480 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL ++ A L ++ + + Q LL P + L + E A H + L +G Sbjct: 481 GLALLALTVAERWLKQAQLNPP--AEGLRPQPLLIPLKLTLDKNEAAACQRHQKLLATMG 538 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY 543 I+ A +R + L ++N+ +L+ +++ + + LAT ++ + Sbjct: 539 IELAVEHARA-TLRAVSLPLRQQNLQKLIPELLGYLSQHEEISP------DALATWISRH 591 Query: 544 -GSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 GS + +LL ++E+ C Sbjct: 592 LGS--EHEVWNVSQAIQLLTDVERL-----CP 616 >gi|320539679|ref|ZP_08039343.1| putative methyl-directed mismatch repair protein [Serratia symbiotica str. Tucson] gi|320030291|gb|EFW12306.1| putative methyl-directed mismatch repair protein [Serratia symbiotica str. Tucson] Length = 620 Score = 415 bits (1066), Expect = e-113, Method: Composition-based stats. Identities = 160/608 (26%), Positives = 276/608 (45%), Gaps = 48/608 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++ ++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATCIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ +A+ RH TSKIS DD I + GFRGEAL SI +VS L+L SR + + Sbjct: 61 CGIGKDDLALALARHATSKISTLDDLEAIVSLGFRGEALASISSVSRLSLTSRTAEQSEA 120 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q + G + +V+P A G+ + V DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYVEGCDQTVTVKPAAHPVGSTLAVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + R+S + G F+ +A+ L+ + E+++ G+ Sbjct: 181 ARFDVAINLSHNGKLIRQYRAAKEKNQHERRLSSICGLAFLQHALNLSWQHGELSICGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R Y ++N R ++D+ I IR AY + + + P VL LE+DP QVDV Sbjct: 241 ADPAGARQLGEIQYCYVNSRMMRDRLINHAIRQAYQDQLKDNQQPAYVLYLEVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINK----------------------------K 329 NVHPAK +RF ++ +FI Q++ + + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTRVLQQAGSALLAEEPAEKETPTWQPENRIAAGGN 360 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKY--ATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 S + +K SS + P Y + + +L+ + + + S P Sbjct: 361 HFSQPTPCCEKTPSSPPASAHGRAPQPAYHSGSGYQKREGELYGKLLQAAKPQDEMSKQP 420 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 + E A++ IH + ER + + + Sbjct: 421 LFPPVKSAQEALPASNSHSFGRVMMIHPPCYALIDWQHQPALLNLLVAERW-LRQTQLNP 479 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + SQ LL P + L + E I+ H L ++G+ + + +R +P L ++ Sbjct: 480 PEEGLRSQPLLVPIKLVLSKNEATAIVRHQALLVKMGLDL-QADHGHVMLRAVPLPLRQQ 538 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY-GSIRSGRKMQSIEMNRLLREMEK 566 N+ +L+ +++ + + +A GS ++ S + +LL ++E+ Sbjct: 539 NLQKLIPELLGYLAGHQEMSPTM-----LAIWLAQRLGS--EHQQWNSSQAIQLLTDVER 591 Query: 567 NPNSSQCN 574 C Sbjct: 592 L-----CP 594 >gi|218707781|ref|YP_002415300.1| DNA mismatch repair protein [Escherichia coli UMN026] gi|293402797|ref|ZP_06646894.1| DNA mismatch repair protein mutL [Escherichia coli FVEC1412] gi|298378327|ref|ZP_06988211.1| DNA mismatch repair protein mutL [Escherichia coli FVEC1302] gi|300899708|ref|ZP_07117934.1| DNA mismatch repair protein [Escherichia coli MS 198-1] gi|226723036|sp|B7NGA4|MUTL_ECOLU RecName: Full=DNA mismatch repair protein mutL gi|218434878|emb|CAR15816.1| methyl-directed mismatch repair protein [Escherichia coli UMN026] gi|291429712|gb|EFF02726.1| DNA mismatch repair protein mutL [Escherichia coli FVEC1412] gi|298280661|gb|EFI22162.1| DNA mismatch repair protein mutL [Escherichia coli FVEC1302] gi|300356719|gb|EFJ72589.1| DNA mismatch repair protein [Escherichia coli MS 198-1] Length = 615 Score = 415 bits (1066), Expect = e-113, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 268/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRIAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHPAK +RF ++ +FI Q + + ++ + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDDPQPAPRAIPENRVAAGR 360 Query: 344 ----------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P + + + ++ LL + P Sbjct: 361 NHFAEPAVREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKA 420 Query: 394 DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +E A G +H + + + + ++ A L ++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERGGNISLLALPVAERWLRQAQL--TPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + IR +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|162146417|ref|YP_001600876.1| DNA mismatch repair protein mutL [Gluconacetobacter diazotrophicus PAl 5] gi|161784992|emb|CAP54535.1| putative DNA mismatch repair protein mutL [Gluconacetobacter diazotrophicus PAl 5] Length = 623 Score = 415 bits (1066), Expect = e-113, Method: Composition-based stats. Identities = 189/595 (31%), Positives = 302/595 (50%), Gaps = 47/595 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+LSE+++N+IAAGE+IERP+ A+KEL+EN++D+ + R+ ++ GG ++ D+G G Sbjct: 13 IRRLSEQVVNRIAAGEVIERPAAALKELVENAIDSGARRIAVLLERGGIERIEVVDDGCG 72 Query: 63 MTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT +++ +AV+RHCTSK+ D+ I T GFRGEALPSIGA + LT+ SRP ++ ++ Sbjct: 73 MTPDDLLLAVERHCTSKLRDETLVRIETLGFRGEALPSIGAAARLTVTSRPHGADSAWRV 132 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++ G + + P A PGT V V DLFF PAR FLKS +VE +RR+A++ P Sbjct: 133 SVEGGLVGAPAPCAGPPGTRVTVEDLFFATPARRKFLKSPRVEAGHADITVRRLALSVPD 192 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 V+F + + + R++ ++ + + + + + ++ L G+ P+ Sbjct: 193 VAFRLQLDDRVVFDLPA----QDLESRVAAILESEGADGMLPVEGRRGDLVLDGFACGPS 248 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 +R A+ + +NGR V D + + +R AY I GR+ VV L L I P VDVNVHP Sbjct: 249 VHRATASGQILLVNGRPVVDPVLRTAVRVAYRHVIEHGRHAVVALSLTIPPDLVDVNVHP 308 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY--- 358 AK+ +RF +P +R +I ++ +A+ + + A + P Sbjct: 309 AKTELRFADPAAVRGLVIGALGRALGSGAGVA---GVRPGLLQSRPATASRIWYPSADAP 365 Query: 359 -------------------ATSLTNTQEKLFLQENRL-----------STNDLLPSDDPT 388 SL T+ L R+ + Sbjct: 366 SAGLAPAAAPAPAIFSAPGRDSLAGTRLDLGAPAARVLDDPPAAPPPDAGAAGGAGAGGP 425 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDF 447 + D ++A Y LG + AQ+ YI++ + DG LV+VDQHAAHERL E++R + Sbjct: 426 DAAPPDAAILADAADYPLGASVAQVMGTYIVAVSGDGSLVLVDQHAAHERLTHERLRARY 485 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + ++ LL P+ R G K E FG A+ +R +PA+L Sbjct: 486 LDGTLRAKRLLLPKSYPAARYRPTCCCPSPARWRRWGWKLEPFGGGAVLVRALPALLGTD 545 Query: 508 NIPQLLRDIIDEIIDS-----STTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 + LLRD+ DE+ + T L R++ ++A MAC+GS+R+GR + EM Sbjct: 546 DPAGLLRDMADELAEDDLADPGDTGALDGRLDAVIARMACHGSVRAGRSLTRAEM 600 >gi|314936542|ref|ZP_07843889.1| DNA mismatch repair protein HexB [Staphylococcus hominis subsp. hominis C80] gi|313655161|gb|EFS18906.1| DNA mismatch repair protein HexB [Staphylococcus hominis subsp. hominis C80] Length = 674 Score = 415 bits (1066), Expect = e-113, Method: Composition-based stats. Identities = 163/674 (24%), Positives = 293/674 (43%), Gaps = 85/674 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ER S +KEL+EN++DA+++ + + G S ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERSSSVVKELLENAIDAKATEINIEVEQSGISSIRVVDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + RH TSKI+ DD +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEQDDLQLVFHRHATSKINDDDDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNENGH 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I +I S +P GT ++V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYAENGEILSQKPAKAKKGTDIKVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + F+ + K N +G E ++++ G + V ++ +++ L+G+ Sbjct: 182 PNIRFSLISDGKTMLKTN---GSGRTNEVMAEIYGIKVAKDLVHISGDTSDYHLEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GRYP+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFALNKAITEGYHTLLTIGRYPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----KMISSFHQD----NA 350 HP K +R + N II+ I+ A + + + L + K++ +F Q Sbjct: 299 HPTKLEVRLSKEEQLYNLIIEKIRHAFKDRILIPKNDLDRTPKKNKVLHTFEQQKIDFEQ 358 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY--SEDNDPVEESEATHYQLGI 408 + ++ L N + N ST ++ T S + E S + + + Sbjct: 359 KQQNISNKIKQLENKNDPNVSTNNTFSTISSQYDEEHTSDDSYTREDNEHSSVYNNKRSM 418 Query: 409 ACAQIHQNYIISQTTDGLV-IVDQHAAHERLIF-----EKMRQDFNSTK----------- 451 I + D +D E I+ E +++ + K Sbjct: 419 DKDYFDIQKDILNSLDRAESSIDNTRHDETNIYNYDENEDFQENVTNQKEQDIKGKVSST 478 Query: 452 -------ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA--ERFGPNAIAIRE--I 500 + + I +++ R+ + E+ G + +++ I Sbjct: 479 PSRRVPYMEVVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVSNEVQDLLI 538 Query: 501 PAILSKKNIPQLLRD-------------------------------------IIDEIID- 522 P QL+ D II ++I+ Sbjct: 539 PLTFHFSKDEQLIIDQYREELDKVGVHLEHFGGYDYIVNSYPVWFPKVEAEEIIKDMIEL 598 Query: 523 --SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + ++ E+ M+C SI++ ++ EM L+ ++ + + C HGRP Sbjct: 599 VLNHKKIDVKKMREDAAIMMSCKKSIKANHYLKKNEMADLIDQLREAEDPFTCPHGRPII 658 Query: 581 IKLKLSDIEKLFGR 594 I ++EKLF R Sbjct: 659 INFSNYELEKLFKR 672 >gi|292489622|ref|YP_003532512.1| DNA mismatch repair protein mutL [Erwinia amylovora CFBP1430] gi|292898158|ref|YP_003537527.1| DNA mismatch repair protein [Erwinia amylovora ATCC 49946] gi|291198006|emb|CBJ45108.1| DNA mismatch repair protein [Erwinia amylovora ATCC 49946] gi|291555059|emb|CBA23145.1| DNA mismatch repair protein mutL [Erwinia amylovora CFBP1430] Length = 613 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 168/601 (27%), Positives = 282/601 (46%), Gaps = 41/601 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGARLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ MA+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIDKGELAMALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTEAQSEA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q ++ +V+P A GT +EV DLF+ PAR F+++E+ E I ++IRR+A+ Sbjct: 121 WQAYAEGRDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + S + S +G R+ + G F+ +A+++ + +E+ L G+ Sbjct: 181 ARFDVAISLSHNGKLVRQYRAVSDDGQRERRLGAICGTAFLTHALKIAWQHSELNLHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P ++ + Y ++NGR ++D+ I IR AY + + P VL LEIDP QVDV Sbjct: 241 ADPVGSKTLSELQYCYVNGRMMRDRLINHAIRQAYQDKLGDRHQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-SSVLSKKMISSFHQDNAPKTHLP 356 NVHPAK +RF ++ +FI Q + + + G T + + + + +N Sbjct: 301 NVHPAKHEVRFHQSRLVHDFIYQGVVSVLQESGAETLPEIATVQPAERWQPENRQAAGGN 360 Query: 357 KYATSLT----------------NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 ++T T QE ++ + LL + + P ++ Sbjct: 361 HFSTPATAPAAAPRPALTGGGSWQRQEPVYQKREGAVYQQLLQTPARSEEPQTAPASATQ 420 Query: 401 A-------THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 + G + Q Y + + + L ++ A L ++ + S + Sbjct: 421 NKEPPLSGHTHSFGRVLTVVQQQYALLEAKNSLALLALAVAARWLKQAQL--EPGSEGLK 478 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 Q LL P + L + E + L+++GI F + + +R +P L ++N+ L+ Sbjct: 479 PQPLLIPLRLKLEKAERDAGSRCNALLNQMGIDL-LFDAHHVMLRAVPLPLRQQNLQNLI 537 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 +++ + Q + LA S + + LL E+E+ C Sbjct: 538 PEMLGYLARHQEVTAYQ--LAQWLA----RQSASEHQHWNHSQAITLLAEVERL-----C 586 Query: 574 N 574 Sbjct: 587 P 587 >gi|229496657|ref|ZP_04390371.1| DNA mismatch repair protein MutL [Porphyromonas endodontalis ATCC 35406] gi|229316554|gb|EEN82473.1| DNA mismatch repair protein MutL [Porphyromonas endodontalis ATCC 35406] Length = 641 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 157/643 (24%), Positives = 298/643 (46%), Gaps = 60/643 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RP+ +KEL+ENSLDA + R+ + GK+ ++TD+G G Sbjct: 5 IHVLPDSIANQIAAGEVIQRPASILKELVENSLDAGAKRIIVEVEEAGKASLKVTDDGCG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKISD D ++ + GFRGEAL SI +V+ + L +R ++ Q Sbjct: 65 MSQMDARMAFERHATSKISDVQDLFSLRSMGFRGEALASIASVAQVELTTRRAEDEMATQ 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ++G + SVR VA G+ VR++FF +PAR FLKS Q E + + R+ + YP Sbjct: 125 LTLNGSDVVSVRNVAAPVGSSFMVRNVFFNVPARRRFLKSNQTELKHLIEQFERIVLVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 VSF+F + + + + RI+ +G+ + ++ ++ + G+ +P Sbjct: 185 GVSFSFYSDGNLTLNLPATT----QRRRITDTLGQSVDKGLIPIHFENEISNINGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + + Y+F+NGR ++ + I + Y + + G P L IDP ++DVN+H Sbjct: 241 DYAKKRGAEQYLFVNGRYMRHPYFHRAILSVYEKLLSPGYAPNYFLFFSIDPSRIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI------------------ 342 P K+ I+F + I + +I+++++ + K + Sbjct: 301 PTKTEIKFLDEQAIFKLLAIAIRQSLSTTMAVPTIDFEHKNVVDIPIYSGKQKEVLPSPD 360 Query: 343 -------SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 + F+ + P T S + + K+ + S + T+S+ Sbjct: 361 QPLDPDYNPFNSTDLPITQSSAKGYSAPSRRPKVDWKSMFESFEQHKENRATTFSQKEAA 420 Query: 396 VEESEAT-----------------------HYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 E+ C YI+S + G+V++D Sbjct: 421 PISPESCLVSEKNPPQNQLFSTQENFSSQAVSLEKTPCFLHDNKYIVSSVSRGVVLIDYK 480 Query: 433 AAHERLIFEKMRQDF--NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 A +R+I+E+++++F + ++ LL PE+ + AL+ +L +G + Sbjct: 481 RAQQRIIYEEVKREFAKEGKEHATRKLLFPELCSFPTKDVALVDSLLPELESIGFEISSL 540 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMAC-YGSIRSG 549 G + +I +P ++ + + +L+ II ++ S + T + +E + ++ G+I S Sbjct: 541 GGGSYSILAVPEMV-ETDAKELVEQIISNALEQSIS-TKEALVEILALKLSNYRGAI-SN 597 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 + + L+ ++ S+ G+ L ++I++ F Sbjct: 598 LPVSPEGIEALIAKLFSCQESTYTPQGKLIMRVLSNNEIQQSF 640 >gi|162418239|ref|YP_001605281.1| DNA mismatch repair protein [Yersinia pestis Angola] gi|238687244|sp|A9QYN3|MUTL_YERPG RecName: Full=DNA mismatch repair protein mutL gi|162351054|gb|ABX85002.1| DNA mismatch repair protein MutL [Yersinia pestis Angola] Length = 635 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 160/625 (25%), Positives = 277/625 (44%), Gaps = 67/625 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR + + Sbjct: 61 CGISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + + R++ + G F+ +A+ + + ++ + G+ Sbjct: 181 ARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGDLNIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++N R ++D+ I IR AY + + + P VL L+IDP QVDV Sbjct: 241 ADPAASHTLSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-------A 350 NVHPAK +RF ++ +FI Q++ + + ++ + + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTAVLQQTNAPILNISEEGEVDAPRWQQENRVAAGT 360 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN----------------- 393 K P+ A S Q + + L +D Y + Sbjct: 361 NKYAQPEAAKSSAAEQAVARERSSARERAALAYKEDHPYQKQQGELYRQLLQPSAAAKPA 420 Query: 394 ----------------------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 E +Y G Y + + G+ ++ Sbjct: 421 TSPAAIPASSVSSPSIPVQRITQAEEPLHGDNYSFGRVLTVFPPCYALIEYQGGVALLSL 480 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 A ER ++ + + Q LL P I L + E A H++ L +GI+ Sbjct: 481 -AVAERW-LKQAQLSPPEEGLRPQPLLIPLKITLDKNEIAACQNHEKLLITMGIELSVEQ 538 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSG 549 A +R + L ++N+ +L+ +++ + + LAT +A + GS Sbjct: 539 GRA-TLRAVSLPLRQQNLQKLIPELLGYLSQHEEISP------DTLATWLARHLGS--EH 589 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCN 574 + +LL E+E+ C Sbjct: 590 EVWNVSQAIQLLTEVERL-----CP 609 >gi|22124542|ref|NP_667965.1| DNA mismatch repair protein [Yersinia pestis KIM 10] gi|45440381|ref|NP_991920.1| DNA mismatch repair protein [Yersinia pestis biovar Microtus str. 91001] gi|51594775|ref|YP_068966.1| DNA mismatch repair protein [Yersinia pseudotuberculosis IP 32953] gi|108809903|ref|YP_653819.1| DNA mismatch repair protein [Yersinia pestis Antiqua] gi|108813460|ref|YP_649227.1| DNA mismatch repair protein [Yersinia pestis Nepal516] gi|145600850|ref|YP_001164926.1| DNA mismatch repair protein [Yersinia pestis Pestoides F] gi|150260585|ref|ZP_01917313.1| DNA mismatch repair protein [Yersinia pestis CA88-4125] gi|165926767|ref|ZP_02222599.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis str. F1991016] gi|165936468|ref|ZP_02225036.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis str. IP275] gi|166011848|ref|ZP_02232746.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua str. E1979001] gi|166213990|ref|ZP_02240025.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua str. B42003004] gi|167400705|ref|ZP_02306214.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418954|ref|ZP_02310707.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423238|ref|ZP_02314991.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470469|ref|ZP_02335173.1| DNA mismatch repair protein MutL [Yersinia pestis FV-1] gi|170026016|ref|YP_001722521.1| DNA mismatch repair protein [Yersinia pseudotuberculosis YPIII] gi|186893782|ref|YP_001870894.1| DNA mismatch repair protein [Yersinia pseudotuberculosis PB1/+] gi|218927574|ref|YP_002345449.1| DNA mismatch repair protein [Yersinia pestis CO92] gi|229836631|ref|ZP_04456797.1| methyl-directed mismatch repair protein [Yersinia pestis Pestoides A] gi|229840243|ref|ZP_04460402.1| methyl-directed mismatch repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842321|ref|ZP_04462476.1| methyl-directed mismatch repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229903940|ref|ZP_04519053.1| methyl-directed mismatch repair protein [Yersinia pestis Nepal516] gi|270489072|ref|ZP_06206146.1| DNA mismatch repair protein, C-terminal domain protein [Yersinia pestis KIM D27] gi|294502480|ref|YP_003566542.1| DNA mismatch repair protein [Yersinia pestis Z176003] gi|20455102|sp|Q8ZIW4|MUTL_YERPE RecName: Full=DNA mismatch repair protein mutL gi|81825958|sp|Q66FB7|MUTL_YERPS RecName: Full=DNA mismatch repair protein mutL gi|123073158|sp|Q1CEF3|MUTL_YERPN RecName: Full=DNA mismatch repair protein mutL gi|123245400|sp|Q1C0Z8|MUTL_YERPA RecName: Full=DNA mismatch repair protein mutL gi|166232114|sp|A4TRP1|MUTL_YERPP RecName: Full=DNA mismatch repair protein mutL gi|238688465|sp|B1JMP1|MUTL_YERPY RecName: Full=DNA mismatch repair protein mutL gi|238691358|sp|B2K202|MUTL_YERPB RecName: Full=DNA mismatch repair protein mutL gi|21957340|gb|AAM84216.1|AE013665_5 DNA mismatch repair protein [Yersinia pestis KIM 10] gi|45435237|gb|AAS60797.1| DNA mismatch repair protein [Yersinia pestis biovar Microtus str. 91001] gi|51588057|emb|CAH19663.1| DNA mismatch repair protein [Yersinia pseudotuberculosis IP 32953] gi|108777108|gb|ABG19627.1| DNA mismatch repair protein MutL [Yersinia pestis Nepal516] gi|108781816|gb|ABG15874.1| DNA mismatch repair protein MutL [Yersinia pestis Antiqua] gi|115346185|emb|CAL19053.1| DNA mismatch repair protein [Yersinia pestis CO92] gi|145212546|gb|ABP41953.1| DNA mismatch repair protein MutL [Yersinia pestis Pestoides F] gi|149289993|gb|EDM40070.1| DNA mismatch repair protein [Yersinia pestis CA88-4125] gi|165915584|gb|EDR34193.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis str. IP275] gi|165921390|gb|EDR38614.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis str. F1991016] gi|165989207|gb|EDR41508.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua str. E1979001] gi|166204785|gb|EDR49265.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua str. B42003004] gi|166962948|gb|EDR58969.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050073|gb|EDR61481.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057408|gb|EDR67154.1| DNA mismatch repair protein MutL [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752550|gb|ACA70068.1| DNA mismatch repair protein MutL [Yersinia pseudotuberculosis YPIII] gi|186696808|gb|ACC87437.1| DNA mismatch repair protein MutL [Yersinia pseudotuberculosis PB1/+] gi|229679710|gb|EEO75813.1| methyl-directed mismatch repair protein [Yersinia pestis Nepal516] gi|229690631|gb|EEO82685.1| methyl-directed mismatch repair protein [Yersinia pestis biovar Orientalis str. India 195] gi|229696609|gb|EEO86656.1| methyl-directed mismatch repair protein [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706315|gb|EEO92323.1| methyl-directed mismatch repair protein [Yersinia pestis Pestoides A] gi|262360510|gb|ACY57231.1| DNA mismatch repair protein [Yersinia pestis D106004] gi|270337576|gb|EFA48353.1| DNA mismatch repair protein, C-terminal domain protein [Yersinia pestis KIM D27] gi|294352939|gb|ADE63280.1| DNA mismatch repair protein [Yersinia pestis Z176003] Length = 635 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 159/625 (25%), Positives = 276/625 (44%), Gaps = 67/625 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR + + Sbjct: 61 CGISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + + R++ + G F+ +A+ + + ++ + G+ Sbjct: 181 ARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGDLNIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++N R ++D+ I IR AY + + + P VL L+IDP QVDV Sbjct: 241 ADPAASHTLSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-------A 350 NVHPAK +RF ++ +FI Q++ + + ++ + + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTAVLQQTNAPILNISEEGEVDAPRWQQENRVAAGT 360 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN----------------- 393 K P+ A S Q + + +D Y + Sbjct: 361 NKYAQPEAAKSSAAEQAVARERSSARERAAPAYKEDHPYQKQQGELYRQLLQPSAAAKPA 420 Query: 394 ----------------------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 E +Y G Y + + G+ ++ Sbjct: 421 TSPAAIPASSVSSPSIPVQRITQAEEPLHGDNYSFGRVLTVFPPCYALIEYQGGVALLSL 480 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 A ER ++ + + Q LL P I L + E A H++ L +GI+ Sbjct: 481 -AVAERW-LKQAQLSPPEEGLRPQPLLIPLKITLDKNEIAACQNHEKLLITMGIELSVEQ 538 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSG 549 A +R + L ++N+ +L+ +++ + + LAT +A + GS Sbjct: 539 GRA-TLRAVSLPLRQQNLQKLIPELLGYLSQHEEISP------DTLATWLARHLGS--EH 589 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCN 574 + +LL E+E+ C Sbjct: 590 EVWNVSQAIQLLTEVERL-----CP 609 >gi|261342831|ref|ZP_05970689.1| DNA mismatch repair protein MutL [Enterobacter cancerogenus ATCC 35316] gi|288314873|gb|EFC53811.1| DNA mismatch repair protein MutL [Enterobacter cancerogenus ATCC 35316] Length = 614 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 164/603 (27%), Positives = 272/603 (45%), Gaps = 42/603 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + G R+ + G F+ +A+ + + ++ L+G+ Sbjct: 181 ARFDVTINLSHNGKVMRQYRAVAEGGQKERRLGAICGTPFLEHALAIEWQHGDLALRGWV 240 Query: 238 GIPT-FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P + A Y ++NGR ++D+ I IR A E + + P VL L IDP QVD Sbjct: 241 ADPKVSSAAFAEVQYCYVNGRMMRDRLINHAIRQACEEKLGADQQPAFVLYLNIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN------- 349 VNVHPAK +RF ++ +FI Q + + ++ T + + + +N Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAEPTLPLDDSEPSARSLPENRVAAGRN 360 Query: 350 -------APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE-- 400 A + P++A S + + N D VE E Sbjct: 361 HFAEPAVAREPAAPRFAASGSTPRATGANYPNAQPGYQKQQGALYRKLLDTPAVEHKERI 420 Query: 401 --------ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 G I + + + L+++ A L ++ N+ Sbjct: 421 AVSTPSLDGHSQSFGRVLTIIAPDVALLEREGQLMLLALPVAERWLKQAQLTPGINAA-- 478 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 +Q LL P + + E A++ L +GI+ + IR +P L ++N+ L Sbjct: 479 CAQPLLIPVRLKITAQEAAVLQRATPLLAEMGIEI-ALEAQHVTIRAVPLPLRQQNLQNL 537 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + ++I + +T+ + + + + +L E+E+ Sbjct: 538 IPELIGYLAQQTTSDAANTAQWIARHLASEHAA------WSMAQAITVLAEVERL----- 586 Query: 573 CNH 575 C H Sbjct: 587 CPH 589 >gi|312173800|emb|CBX82054.1| DNA mismatch repair protein mutL [Erwinia amylovora ATCC BAA-2158] Length = 613 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 169/601 (28%), Positives = 283/601 (47%), Gaps = 41/601 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGARLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ MA+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIDKGELAMALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTEAQSEA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q ++ +V+P A GT +EV DLF+ PAR F+++E+ E I ++IRR+A+ Sbjct: 121 WQAYAEGRDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + S + S +G R+ + G F+ +A+++ + +E+ L G+ Sbjct: 181 ARFDVAISLSHNGKLVRQYRAVSDDGQRERRLGAICGTAFLTHALKIAWQHSELNLHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P ++ + Y ++NGR ++D+ I IR AY + + P VL LEIDP QVDV Sbjct: 241 ADPVGSKTLSELQYCYVNGRMMRDRLINHAIRQAYQDKLGDRHQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-SSVLSKKMISSFHQDNAPKTHLP 356 NVHPAK +RF ++ +FI Q + + + G T + + + + +N Sbjct: 301 NVHPAKHEVRFHQSRMVHDFIYQGVVSVLQESGAETLPEIATVQPAERWQPENRQAAGGN 360 Query: 357 KYATSLT----------------NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 ++T T QE ++ + LL + + P ++ Sbjct: 361 HFSTPATAPAAAPRPALTGGGSWQRQEPVYQKREGAVYQQLLQTPARSEEPQTAPASATQ 420 Query: 401 A-------THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 + G + Q Y + +T + L ++ A L ++ + S + Sbjct: 421 NKEPPLSGHTHSFGRVLTVVQQQYALLETKNSLALLALAVAARWLKQAQL--EPGSEGLK 478 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 Q LL P + L + E + L+++GI F + + +R +P L ++N+ L+ Sbjct: 479 PQPLLIPLRLKLEKAERDAGSRCNALLNQMGIDL-LFDAHHVMLRAVPLPLRQQNLQNLI 537 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 +++ + Q + LA S + + LL E+E+ C Sbjct: 538 PEMLGYLARHQEVTAYQ--LAQWLA----RQSASEHQHWNHSQAITLLAEVERL-----C 586 Query: 574 N 574 Sbjct: 587 P 587 >gi|254994810|ref|ZP_05277000.1| DNA mismatch repair protein (mutL) [Anaplasma marginale str. Mississippi] Length = 595 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 197/596 (33%), Positives = 312/596 (52%), Gaps = 39/596 (6%) Query: 35 LD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGF 92 LD + ++ + +I GG++ + D+G G+ +E+ A H TSK+ D D +NI + GF Sbjct: 2 LDRSGATTINVLIDKGGRNLISVIDDGCGIPRDEMERAFICHATSKLPDNDLNNIRSMGF 61 Query: 93 RGEALPSIGAVSHLTLMSRPPQNNTGAQIAISG-EKISSVRPVAMNPGTIVEVRDLFFTI 151 RGE L SI AV+ ++S+ I + G EK + P A+ GT +EVRDLFF Sbjct: 62 RGEGLTSIAAVARTKMVSKYRGCTEAWSIVLEGGEKTRDLSPEALPCGTSIEVRDLFFAT 121 Query: 152 PARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQ 211 P RL FL++E+ ET I D++ R A A +F+ + +K + + R+ + Sbjct: 122 PTRLKFLRTEKAETQSIVDLMYRFATARFSTAFSLTIADKQIFKYPAR---EDLMSRLWE 178 Query: 212 V--IGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIR 269 + G+ F ++E+ S+ I + GY +PTFNR + Y F+NGR V + I+ Sbjct: 179 MKPFGDAFREQSLEVRFHSDAINITGYISVPTFNRSRPDMIYTFVNGRPVHSTLFMGAIK 238 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 +AY+E IP R+PVVV+ +EI P VDVNVHP+K +RFRN + + +++++ A++ Sbjct: 239 SAYSEFIPRDRHPVVVMCMEILPGDVDVNVHPSKLEVRFRNRKQVYSVVVEALATALSSN 298 Query: 330 GIS--TSSVLSKKMISSFHQDNAPKTHLPKYAT---------------------SLTNTQ 366 + F DN P P Y ++ Sbjct: 299 VYRELPPRTPVGGGLDHFAVDNTPVLDTPHYGKVHDYGVAVGPKLSVQQTGGGGEFSSKP 358 Query: 367 EKLFLQENRLS-------TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 E R + + + P S D++ LG A Q+ YI+ Sbjct: 359 EHAIENPPRAAELFSFLGSGSSRRTTRPVLSYDSEAHIVPLIEELPLGNAVCQLFDRYIV 418 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC-ALIMEHDE 478 S+ D ++IVDQHAAHERL +E M++ + Q LL PE+++L L+ E+ E Sbjct: 419 SRAGDHVIIVDQHAAHERLTYEYMKKVTADEGMKRQVLLMPELVELDNEYELELLGEYKE 478 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L + G+ E G +A+RE+PAIL ++ ++ I++ I++ ++++I+++ Sbjct: 479 KLLKFGLVIEPMGSMVVAVREVPAILGVFDVKAMIAKIVESIVEVGDALFMREKIKHVCG 538 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T+ACY SIRSGR ++ EMN LLR+ME P+S QCNHGRPT++KL LS+I+KLF R Sbjct: 539 TIACYSSIRSGRTLKLEEMNSLLRQMEDTPHSGQCNHGRPTYVKLSLSEIDKLFER 594 >gi|237729103|ref|ZP_04559584.1| DNA mismatch repair protein mutL [Citrobacter sp. 30_2] gi|226908832|gb|EEH94750.1| DNA mismatch repair protein mutL [Citrobacter sp. 30_2] Length = 622 Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats. Identities = 161/610 (26%), Positives = 272/610 (44%), Gaps = 50/610 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENS+DA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQPEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ +A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKVVRQYRAVAADGQKERRLGAICGTPFLEHALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTAALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH---------- 346 VNVHPAK +RF ++ +FI Q + + ++ + + + H Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLADDDEPAPRHIPENRVAAGR 360 Query: 347 -----QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA 401 A + P+Y+ S ++ S P E + ++ A Sbjct: 361 NHFAEPAPAREPATPRYSASAGTGSGSSGGRQAGASWPHAQPGYQKQQGEIYQQLMQTPA 420 Query: 402 T-----------------HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 G + + + + + ++ A L ++ Sbjct: 421 PTRKTPVSETPSTPLAGSSQGFGRVLTIVGADCALLECDGHIRLLALPVAERWLRQAQL- 479 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 + +Q LL P + + E A + + L LGI+ + + IR +P L Sbjct: 480 -TPGQGAVCAQPLLIPLRLKVTADEKAALHKGQSQLAELGIEF-QLDAQHVTIRAVPLPL 537 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 ++N+ L+ ++I + S M+ + + + LL ++ Sbjct: 538 RQQNLQILIPELIGYLAQQSVFEPGNIAQWIARNLMSEHP------QWSMAQAITLLADV 591 Query: 565 EKNPNSSQCN 574 E+ C Sbjct: 592 ERL-----CP 596 >gi|312870472|ref|ZP_07730592.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus oris PB013-T2-3] gi|311094029|gb|EFQ52353.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus oris PB013-T2-3] Length = 675 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 153/659 (23%), Positives = 277/659 (42%), Gaps = 69/659 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L++ + +QIAAGE+IERP+ +KEL+ENSLDA+S RV+ ++ G ++ D+G Sbjct: 3 QIHELNDILADQIAAGEVIERPASIVKELVENSLDAQSKRVDIIVENAGLDSIRVIDDGQ 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ +A +RH TSKI+ D + T GFRGEALPSI +V+ + L + G Sbjct: 63 GIAADDVELAFKRHATSKINSRQDLFRVQTMGFRGEALPSIASVADVELTTAIADATAGR 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ + +P GT V V +LFF PARL +LKS Q E ITD+I R+A+A Sbjct: 123 TVHLRGGKLVTNQPAPARRGTDVRVTELFFNTPARLKYLKSPQTELARITDIINRLALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F+F+ ++ + N N + I+ + G + + N+ + G+ + Sbjct: 183 PQVAFSFTHNGKEIFR---SAGNDNLQQVIATIYGIQAGRKMLAVQGTDNDFRVTGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + + IN R V++ + I Y + +GRYPV V+ +++DP VDVNV Sbjct: 240 PELTRASRQYITIMINHRYVRNYALTKAIIQGYESKLMVGRYPVAVINIDLDPVLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST---SSVLSKKMISSFHQDNAPKTHLP 356 HPAK +R + I Q+I++ I ++ + + + + D + + Sbjct: 300 HPAKREVRLSKEDQLAKLIAQTIRQRIAQENLIPDVDADRFTPQPDPDLVDDLNRRLNEA 359 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 + + T S ++ D + +Q + + Sbjct: 360 AASYGVDQADTAGASSAAAGVTPPQPTSTTKAGADTVDSQIPAPVIIHQSSELNSARMKE 419 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-KITSQTLLTPEIIDLLEGECALIME 475 + + L + + + ++ E + + ++ Sbjct: 420 FDARYQDESLPALFNDSGRPAADSQSTAPVQTENLELDVHDKSDQETGRFPDLQYIGQLQ 479 Query: 476 HDEDLHRLG--------------IKAERFGPNAIAIRE------IPAILSKKNIPQLLR- 514 L + G I ER+ + +P +L+ + L Sbjct: 480 GTFLLAQAGDGLYIVDQHAAQERINYERYRQEIGQVSADQQTFLVPLVLNYSTVDALAIS 539 Query: 515 ---DIID---------------------EIIDSSTTYTLQDRIENIL------------- 537 D++ + T+++ I+ I+ Sbjct: 540 NHADVLASVGLHLEHFGQNSFLLRSHPTWFKEGQEEDTVREMIDWIIKDGKLTVQQFRMK 599 Query: 538 --ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C +I++ + E LLR + + N C HGRP + D+EK+F R Sbjct: 600 TAIMMSCKRAIKANHHLDDREARALLRRLPQCENPFNCPHGRPVTVHFNDRDLEKMFKR 658 >gi|313125312|ref|YP_004035576.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM 11551] gi|312291677|gb|ADQ66137.1| DNA mismatch repair protein MutL [Halogeometricum borinquense DSM 11551] Length = 586 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 166/627 (26%), Positives = 280/627 (44%), Gaps = 88/627 (14%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++RKL E+ + IAAGE+I RP A+ EL+EN+LDAE++RVE + G G ++ DNG Sbjct: 8 RVRKLDEETVASIAAGEVITRPEDAVVELVENALDAEATRVEVTVVGDGTDLLRVRDNGR 67 Query: 62 GMTSEEIPMAVQRHCTSKISD-----------------DFSNIHTFGFRGEALPSIGAVS 104 GM+ + +AV+RH TSK+ D D + T GFRGEALPSI A Sbjct: 68 GMSETDAALAVERHTTSKLGDVAEGTSEGHRTSSGDAADLQTVSTLGFRGEALPSIAAAG 127 Query: 105 HLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVE 164 L L++ T + E V+P+ GT VEVRDLF IPAR L S + E Sbjct: 128 TLELVT--NDGGTRGTRVVVAEDEKHVKPIGRARGTTVEVRDLFAEIPARRQSLASSRAE 185 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTI------KSNRYKMNFQSTNGNFPERISQVIGEDFI 218 ++D + R A+ P V+F+ ++ S +G++ + I V D Sbjct: 186 FARVSDAVSRYALTRPDVAFSLVHETGGESPDGGGREVFSTSGSGDYADAILGVYDRDVA 245 Query: 219 --------NNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRT 270 + N ++ ++++G P+ R + Y +NGR + + + Sbjct: 246 GRSSTFESEREITDNGETVTVSVEGLLAHPSVTRSRRDHIYTAVNGRAFPSEPLRRAVVA 305 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 Y + +P GR PV V+ + + P D NVHPAK +R R + + +++ A++ Sbjct: 306 GYGDVLPDGRAPVAVVSVSLPPPWCDHNVHPAKREVRLRAQRAVERTVREAVHDALSTAD 365 Query: 331 ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + S + A L +T E + +E+R Sbjct: 366 LRRSEDV---------------------AMDLDSTLEPVDGEESR--------------- 389 Query: 391 EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 + Q Y++ + D L+++D HAAHER+ +E++R + Sbjct: 390 -------------FDGVRVIGQFRDLYLLCEADDDLLVIDHHAAHERVNYERLRAAVGAG 436 Query: 451 K---ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + + S + + L + A E ++L LG + + FG + + +R +PA + + Sbjct: 437 EVNAVESIPIDPAATVSLSPAQAAATAEWRDELAHLGYELDSFGGDTVRVRGVPAPMGRA 496 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 P+ +RD +D + T DR +L +AC+ S+++G + + E RL+ + Sbjct: 497 AAPESVRDALDALRGGETPGDATDR---LLKDLACHPSLKAGDALNTEEATRLVERLGSC 553 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT + ++ + F R Sbjct: 554 EQPYACPHGRPTVLSIEEETFVRGFER 580 >gi|153947725|ref|YP_001402609.1| DNA mismatch repair protein [Yersinia pseudotuberculosis IP 31758] gi|167012380|sp|A7FMY1|MUTL_YERP3 RecName: Full=DNA mismatch repair protein mutL gi|152959220|gb|ABS46681.1| DNA mismatch repair protein MutL [Yersinia pseudotuberculosis IP 31758] Length = 635 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 158/625 (25%), Positives = 274/625 (43%), Gaps = 67/625 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR + + Sbjct: 61 CGISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + + R++ + G F+ +A+ + + ++ + G+ Sbjct: 181 ARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGDLNIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++N R ++D+ I IR AY + + + P VL L+IDP QVDV Sbjct: 241 ADPAASHTLSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-------A 350 NVHPAK +RF ++ +FI Q++ + + ++ + + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTAVLQQTNAPILNISEEGEVDAPRWQQENRVAAGT 360 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN----------------- 393 K P+ A S Q + + +D Y + Sbjct: 361 NKYAQPEAAKSSAAEQAVARERSSARERAAPAYKEDHPYQKQQGELYRQLLQPSAAAKPA 420 Query: 394 ----------------------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 E +Y G Y + + G+ ++ Sbjct: 421 TSPAAIPASSVSSPSIPVQRITQAEEPLHGDNYSFGRVLTVFPPCYALIEYQGGVALLSL 480 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 A L ++ + Q LL P I L + E A H++ L +GI+ Sbjct: 481 TVAERWLKQAQL--SPPEEGLRPQPLLIPLKITLDKNEIAACQNHEKLLITMGIELSVEQ 538 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSG 549 A +R + L ++N+ +L+ +++ + + LAT +A + GS Sbjct: 539 GRA-TLRAVSLPLRQQNLQKLIPELLGYLSQHEEISP------DTLATWLARHLGS--EH 589 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCN 574 + +LL E+E+ C Sbjct: 590 EVWNVSQAIQLLTEVERL-----CP 609 >gi|238755899|ref|ZP_04617227.1| DNA mismatch repair protein mutL [Yersinia ruckeri ATCC 29473] gi|238705858|gb|EEP98247.1| DNA mismatch repair protein mutL [Yersinia ruckeri ATCC 29473] Length = 623 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 157/613 (25%), Positives = 274/613 (44%), Gaps = 55/613 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR + + Sbjct: 61 CGIAKGDLSLALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLMLTSRTAEQSEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +++P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + R++ + G F+ +A+ ++ + +++++G+ Sbjct: 181 ARFDVAINLSHNGKLVRQYRAAPDPSQHERRLASICGPTFLQHALAISWQHGDLSIRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + Y ++N R ++D+ I IR AY + + + P VL L+IDP QVDV Sbjct: 241 ADPGAASTASEMQYCYVNHRMMRDRLINHAIRQAYQDLLTGEQQPAYVLYLDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK----- 352 NVHPAK +RF ++ +FI Q++ + + V I + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTTVLQQSAEPALMVSEHGEIDAPRWQPENRVAAGG 360 Query: 353 ----THLPKYA------TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 P+ A T+ + + + +P + ++ + AT Sbjct: 361 NKYAQPQPEKAVCQREYTAPSTAANSPARERTAPAYTPSVPYQKQQGELYQELLKPAPAT 420 Query: 403 H-------------------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + G Y + + GL ++ A L ++ Sbjct: 421 EPPLVQARKMFGDEPLRSGLHSFGRVLTVFPPCYAVLEYGAGLALLSLSVAERWLKQAQL 480 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + Q LL P + L + E A H L +GI+ A +R + Sbjct: 481 NPPTE--GLRPQPLLIPLKLTLDKTETAACKHHQNLLIAMGIELAIESGRA-TLRAVSLP 537 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSGRKMQSIEMNRLL 561 L ++N+ +L+ +++ + +LAT +A + GS + +LL Sbjct: 538 LRQQNLQKLIPELLGYLSQHKEMSP------EVLATWIARHLGS--EHEVWNISQAIQLL 589 Query: 562 REMEKNPNSSQCN 574 ++E+ C Sbjct: 590 TDVERL-----CP 597 >gi|269926437|ref|YP_003323060.1| DNA mismatch repair protein MutL [Thermobaculum terrenum ATCC BAA-798] gi|269790097|gb|ACZ42238.1| DNA mismatch repair protein MutL [Thermobaculum terrenum ATCC BAA-798] Length = 579 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 164/595 (27%), Positives = 286/595 (48%), Gaps = 41/595 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L E+++ IAAGE+IE P+ +KEL+ENS+DA +S + + GGG + + D+G Sbjct: 22 RIRQLPEEVVRMIAAGEVIESPASVVKELVENSIDAAASSIRVDVKGGGLAHISVVDDGV 81 Query: 62 GMTSEEIPMAVQRHCTSKISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++E+P+A+QRH TSK+ + I T GFRGEALPSI AVS LT+ S N G Sbjct: 82 GIAADELPVAIQRHATSKLPEGRLDAITTLGFRGEALPSIAAVSELTITSSAKGENVGRS 141 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + K+ + + GT+V R LF +PARL + QVE I+ V+RR+ ++ P Sbjct: 142 ITVRDGKVVADHAAPASGGTVVVARHLFRNVPARLAMVDKPQVEVGHISQVLRRLYLSSP 201 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT-GI 239 ++ + + S G+ + ++ G + + ++L + Sbjct: 202 HIALRLYSEGKM---LLSTSGQGDRLAALIELYGGELEEHILDLGIRELRYGRYRLILSD 258 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + + + +N R Q K +L+++ AY +P GR+P+++L L++DP ++DVNV Sbjct: 259 SAVTRPSRHHINIVVNNRWAQVKALLASMEQAYRGILPKGRHPILLLQLDLDPSRLDVNV 318 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK ++ + + + + ++ A+ K S S L I F D Sbjct: 319 HPAKQEVKLLDEREVIESVCEQLRSALGK-NPSASKSLLYYGIEPFPSDY---------- 367 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 +L + E R S +D E+ + AQ+H I+ Sbjct: 368 -------SRLQVAEERESWSD----------------EKILTPNLPPVKVLAQLHDRLIV 404 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + +GL +VDQH AHER+++E+ + + L P +I+L + + E+ ++ Sbjct: 405 LEGDEGLYLVDQHRAHERVLYERFLTERMDGS-EALLLSEPVVIELRTHQVQKLAEYMDE 463 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L LG + E FG NA+ +R +P + D++ + D + + ++ L T Sbjct: 464 LSALGFECEVFGRNALLVRAMPDAGKEIGDHLTTSDLLWILQDEPSAFEDPGNWKHRLIT 523 Query: 540 -MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 MAC ++R G+ ++ M ++ + + C HG P L + + F Sbjct: 524 RMACRMAVRRGKSLEHDHMVWIVERLGHTSVPAICPHGSPIIRYLPRESLYRDFE 578 >gi|332083167|gb|EGI88398.1| DNA mismatch repair protein mutL [Shigella boydii 5216-82] Length = 615 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 161/605 (26%), Positives = 271/605 (44%), Gaps = 47/605 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+EN LDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENCLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRAIPENRVAAGR 360 Query: 345 --FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD------DPTYSEDNDPV 396 F + A + P+Y+ + + N + V Sbjct: 361 NHFAEPAAREPVAPRYSPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKV 420 Query: 397 EESE-----ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 E + A G +H + + + + ++ A L +++ Sbjct: 421 PEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVAERWLR--QVQLTPGEAP 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + + E + + + L LGI + + I +P L ++N+ Sbjct: 479 VCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQHVTIMAVPLPLRQQNLQI 537 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 L+ ++I + + I +A M+ + + + LL ++E+ Sbjct: 538 LIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMAQAITLLADVERL-- 587 Query: 570 SSQCN 574 C Sbjct: 588 ---CP 589 >gi|322831154|ref|YP_004211181.1| DNA mismatch repair protein MutL [Rahnella sp. Y9602] gi|321166355|gb|ADW72054.1| DNA mismatch repair protein MutL [Rahnella sp. Y9602] Length = 639 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 156/576 (27%), Positives = 262/576 (45%), Gaps = 60/576 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIKVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ +A+ RH TSKI+ DD I + GFRGEAL SI +VS L L SR + N Sbjct: 61 CGIGKDDLALALARHATSKITCLDDLEAILSLGFRGEALASISSVSRLILTSRTAEQNEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A G+ VEV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPQGSTVEVLDLFYNTPARRKFMRTEKTEFTHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A VS S + F R++ + F+ +A+E+ ++ + G+ Sbjct: 181 ARFDVSVNLSHNGKLIRQYRAVKDRSQFSRRLASICSPAFVEHALEVEWSHGDLAIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++N R ++D+ I IR AY + + + P VL L++DP QVDV Sbjct: 241 ADPAGSRSLTDMQYCYVNNRMMKDRLINHAIRQAYQDQLKDDQQPAYVLYLDVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS------------------------- 332 NVHPAK +RF ++ +FI Q++ + + G Sbjct: 301 NVHPAKHEVRFHQSRLVHDFIYQAVMSVLQQAGAPVLDEPQLQEDTPRWQQENRQAAGGN 360 Query: 333 -------------------TSSVLSKKMISSFHQDNAPKTHLPKYATSLT--------NT 365 +V + +S +++A ++ P Y S + Sbjct: 361 HFSQPAERKVPASRENNSLRENVFPETARASQPRESAYRSTEPAYNPSESKAYGRLLQPA 420 Query: 366 QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG 425 E LQE + +P ES G Y + + Sbjct: 421 PESFSLQEPAPAVAQPAKPAVSVARTLTEPALES--HSQSFGRVLTVCSAEYALLERGKQ 478 Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 LV++ A L + ++ + Q LL P + + + E A++ H L G+ Sbjct: 479 LVLLALPVADRWLKWAQLTPP--EEGLRPQPLLIPLKLTMQKEETAVLARHQALLQHFGL 536 Query: 486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 + + +R +P L ++N+ +L+ D++ + Sbjct: 537 EMLSESQR-VTVRAVPLPLRQQNLQKLIPDLLGYLA 571 >gi|238764690|ref|ZP_04625634.1| DNA mismatch repair protein mutL [Yersinia kristensenii ATCC 33638] gi|238697086|gb|EEP89859.1| DNA mismatch repair protein mutL [Yersinia kristensenii ATCC 33638] Length = 631 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 160/621 (25%), Positives = 282/621 (45%), Gaps = 63/621 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR + N Sbjct: 61 CGIGKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + R++ + G F+ +A+ ++ + ++T++G+ Sbjct: 181 ARFDVAINLSHNGKLMRQYRAATDPSQHERRLASICGPAFLQHALAISWQHGDLTIRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++N R ++D+ I IR AY + + + P VL L+IDP QVDV Sbjct: 241 ADPAASRTLSEMQYCYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---KGISTSSVLSKKMISSFHQDNAPKTH 354 NVHPAK +RF ++ +FI Q++ + + ++ + + + +N Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTTVLQQAATPRLNINEDGEEIEAPRWQPENRVAAG 360 Query: 355 LPKYATSL---------------TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 KYA + T E+ +E + + P V+ + Sbjct: 361 GNKYAQPEPAKTAPVTRTSSPERSATTERSIAREPAPAYSAGQPYQKQQGELYRQLVQPA 420 Query: 400 ------------------------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 +Y G Y + + G+ +++ A Sbjct: 421 VVNKPAAGSQAAVAPRQRLNDEPLRGDNYSFGRVLTVFPPCYALIEYKQGVALLELTVAE 480 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 L ++ + Q LL P + L + E A H + L +GI+ A Sbjct: 481 RWLKQAQLNPPTE--GLRPQPLLIPLKLTLDKNEAAACQRHQKLLVTMGIELAVEHEKA- 537 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSGRKMQ 553 +R + L ++N+ +L+ +++ + + LAT ++ + GS Sbjct: 538 TLRAVSLPLRQQNLQKLIPELLGYLSQHEEISP------DALATWISRHLGS--EHEVWN 589 Query: 554 SIEMNRLLREMEKNPNSSQCN 574 + +LL ++E+ C Sbjct: 590 VSQAIQLLADVERL-----CP 605 >gi|310821741|ref|YP_003954099.1| DNA mismatch repair protein MutL [Stigmatella aurantiaca DW4/3-1] gi|309394813|gb|ADO72272.1| DNA mismatch repair protein MutL [Stigmatella aurantiaca DW4/3-1] Length = 602 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 162/602 (26%), Positives = 281/602 (46%), Gaps = 16/602 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L + +IN+IAAGE++ERP+ +KEL+ENSLDA + V+ + GGG ++D+G Sbjct: 3 RIARLRDDLINKIAAGEVVERPASVVKELVENSLDAGAHTVQVALEGGGLQRIVVSDDGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ + ++RH TSK+ DD N+ + GFRGEALP+I AVS TL + P+ G Sbjct: 63 GMGREDAVLCLERHATSKLRELDDLENLVSKGFRGEALPAIAAVSRFTLHTAEPEAEVGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G V GT++ V DLF+ PARL F++ + E + + + R+A+A+ Sbjct: 123 RVTVEGGAGLHVEEAPPRVGTVMTVEDLFYNTPARLKFMRRGETELKHVEEAVIRIALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + ERI+ +G D + + E+ +++ G+ Sbjct: 183 PEVSFLVEHGGLPLFTSPACP--EDPTERIAAALGTDVHPHLFSVEERRLGLSITGHIAS 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + A Y F+N R V+D+ ++ I+ Y E +P GR P+VVL ++++P VDVNV Sbjct: 241 PEYTLPTARGIYTFVNHRYVRDRGLIGAIQRGYQEYLPSGRQPLVVLFIDVEPHAVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAI--NKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 HP K +RF + + + ++ +I + + T + H A + L + Sbjct: 301 HPQKMEVRFADSRGVYDAVLAAIVRTLRAAPWLGPTPPEGGDPRRQAAHYAQAVERFLTR 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP-------VEESEATHYQLGIAC 410 + L + ++ L+P+ E ++ Sbjct: 361 AQEATWGAPLPLPSAADAPASLSLVPAAPVPMGRAPAFGQALPQLNEAPPPGYFAALRPM 420 Query: 411 AQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 + + + + G LV++D HAA ER+ + K T L ++L Sbjct: 421 GVLGGRFQVCEGPGGTLVVLDPHAALERVRLMDFHRLLEEGK-TPPPSLFGTTVELPVPA 479 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 +M E L LGI E FG + A++ +P L + LL + + + T Sbjct: 480 ARALMGGRESLALLGIDVEPFGGTSFALKAVPPGLEGADPRALLEALSHALPPAGTPPDA 539 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 E L MAC+ + + K+ ++ LL E++ C HG +++ L ++E Sbjct: 540 VGLAEA-LRVMACHAAQTASDKLTDAQLRALLGELDAADFHPTCRHGTVVVLEMPLLELE 598 Query: 590 KL 591 + Sbjct: 599 RR 600 >gi|238784776|ref|ZP_04628778.1| DNA mismatch repair protein mutL [Yersinia bercovieri ATCC 43970] gi|238714289|gb|EEQ06299.1| DNA mismatch repair protein mutL [Yersinia bercovieri ATCC 43970] Length = 633 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 161/623 (25%), Positives = 279/623 (44%), Gaps = 65/623 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGVKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR + N Sbjct: 61 CGINKEDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + + R++ + G F+ +A+ ++ + ++T++G+ Sbjct: 181 ARFDVAINLSHNGKLMRQYRAATDPSHHERRLASICGLAFLQHALAVSWQHGDLTIRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R Y ++N R ++D+ I IR AY + + + P VL L+IDP QVDV Sbjct: 241 ADPAASRTLGEMQYCYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG---ISTSSVLSKKMISSFHQDNAPKTH 354 NVHPAK +RF ++ +FI Q++ + + ++ + + + +N Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTTVLQQTATPILNVNDDGEEIEAPRWQPENRVAAG 360 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES--------------- 399 + KYA + + + P YS ++ Sbjct: 361 VNKYAQPEPTQAHPAERRAPPERVSPVREQAAPGYSAGQPYQKQQGELYRQLVQPAAVTH 420 Query: 400 --------------------------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 + HY G + Y + + G+ ++ Sbjct: 421 PAEPRTPAVAPPLPPLPRQTSADAPLQGDHYSFGRVLTVLPPCYALIEYKQGVALLALKV 480 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 A L ++ + Q LL P + L + E A H L +GI+ Sbjct: 481 AERWLKQAQLNPPPE--GLRPQPLLIPLKLTLDKIEAAACQRHQALLVTMGIELAVEQGR 538 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSGRK 551 A +R + L ++N+ +L+ +++ + + LAT +A + GS Sbjct: 539 A-TLRAVSLPLRQQNLQKLIPELLGYLSQHEEISP------DALATWLARHLGS--EHEV 589 Query: 552 MQSIEMNRLLREMEKNPNSSQCN 574 + +LL ++E+ C Sbjct: 590 WNVSQAIQLLTDVERL-----CP 607 >gi|295098326|emb|CBK87416.1| DNA mismatch repair protein MutL [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 614 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 157/577 (27%), Positives = 265/577 (45%), Gaps = 39/577 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + G R+ + G F+ A+ + + ++ L+G+ Sbjct: 181 ARFDVTINLSHNGKVMRQYRAVAEGGQKERRLGAICGTPFLEKALAIEWQHGDLALRGWV 240 Query: 238 GIPT-FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P + A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNASSAAFAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN------- 349 VNVHPAK +RF ++ +FI Q + + ++ + ++ +N Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVAAVLQQQAKPELPLAKEEPAPRPLPENRVAAGRN 360 Query: 350 ----------------APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 +P + P+ + + + ++ LL + + E Sbjct: 361 HFAEPAVAREPAAPRLSPAGNAPRPTGANYPNAQPGYHKQQGALYRKLLDTPAVEHKEHI 420 Query: 394 DPVEES-EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 S + G I + + + L+++ A L ++ N+ Sbjct: 421 TVSTPSLDGHSQSFGRVLTIIAPDMALLEREGKLLLLALSVAERWLKQAQLTPGMNAA-- 478 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 +Q LL P + + E ++ L +GI+ + IR +P L ++N+ L Sbjct: 479 CAQPLLIPVRLKISPEETGVLRRVQTQLAEMGIEI-VLDAQHVTIRAVPLPLRQQNLQNL 537 Query: 513 LRDIIDEIIDS---STTYTLQDRIENILA-----TMA 541 + ++I + T Q ++ + +MA Sbjct: 538 IPELIGYLAQQTTFDAADTAQWIARHLASEHAPWSMA 574 >gi|283834788|ref|ZP_06354529.1| DNA mismatch repair protein MutL [Citrobacter youngae ATCC 29220] gi|291069034|gb|EFE07143.1| DNA mismatch repair protein MutL [Citrobacter youngae ATCC 29220] Length = 617 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 161/607 (26%), Positives = 273/607 (44%), Gaps = 49/607 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENS+DA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQEQPEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ +A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKVVRQYRAVAADGQKERRLGAICGTSFLEHALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTAALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN------- 349 VNVHPAK +RF ++ +FI Q + + ++ + + + H Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLSDDDEPAPRHIPENRIAAGR 360 Query: 350 ------------------APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD--DPTY 389 AP + A + + + ++ LL + P Sbjct: 361 NHFAEPAPAREAAAPRYSAPAGGTGRQAGASWPHAQPGYQKQQGEIYQQLLQTPVLPPKA 420 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + P G + + + + + ++ A L ++ Sbjct: 421 TVSETPSAPLTGNSQGFGRVLTIVGADCALLECEGHIRLLALPVAERWLRQAQL--TPEQ 478 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 + +Q LL P + + E A + + L LGI+ + + IR +P L ++N+ Sbjct: 479 GAVCAQPLLIPLRLKVTADEKAALQKGQSQLAELGIEF-QLDAQHVTIRAVPLPLRQQNL 537 Query: 510 PQLLRDIIDEIIDSS--TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 L+ ++I + S + I L + + + + LL ++E+ Sbjct: 538 QILIPELIGYLAQQSVFEPGNIAQWIARNLISE--HS------QWSMAQAITLLADVERL 589 Query: 568 PNSSQCN 574 C Sbjct: 590 -----CP 591 >gi|123440758|ref|YP_001004750.1| DNA mismatch repair protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166232113|sp|A1JIR3|MUTL_YERE8 RecName: Full=DNA mismatch repair protein mutL gi|122087719|emb|CAL10504.1| DNA mismatch repair protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 635 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 158/625 (25%), Positives = 277/625 (44%), Gaps = 67/625 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA +SR++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR + N Sbjct: 61 CGIGKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + R++ + G F+ +A+ ++ + ++T++G+ Sbjct: 181 ARFDVAINLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGDLTIRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++N R ++D+ I IR AY + + + P VL L+IDP QVDV Sbjct: 241 ADPAASRTLSEMQYCYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS------------------------- 332 NVHPAK +RF ++ +FI Q++ + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTTVLQQTATPLLNINEDGEEIEAPRWQPENRVAAG 360 Query: 333 ------------------TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQEN 374 +S + S ++ P H + + +Q Sbjct: 361 ANKYAQPEPANTVPVVRTSSPERTATTERSIARERTPTYHAGEPYQKQQGELYRQLVQPA 420 Query: 375 RLSTNDLLPSDDPTYSEDNDPVEESEATH---YQLGIACAQIHQNYIISQTTDGLVIVDQ 431 ++ + + + E H Y G Y + + G+ +++ Sbjct: 421 AVNKPAAVSQPSAASAPVARQISTDEPLHGDNYSFGRVLTVFPPCYALIEYKQGIALLEL 480 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 A L ++ + + Q LL P + L + E H + L +GI+ Sbjct: 481 TVAERWLKQAQLNPP--AEGLRPQPLLIPLKLTLDKNEATACQRHQKLLATMGIELAVEH 538 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSG 549 A +R + L ++N+ +L+ +++ + + LAT ++ + GS Sbjct: 539 TRA-TLRAVSLPLRQQNLQKLIPELLGYLSQHEEISP------DALATWISRHLGS--EH 589 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCN 574 + +LL ++E+ C Sbjct: 590 EVWNVSQAIQLLTDVERL-----CP 609 >gi|291460843|ref|ZP_06025503.2| DNA mismatch repair protein MutL [Fusobacterium periodonticum ATCC 33693] gi|291380371|gb|EFE87889.1| DNA mismatch repair protein MutL [Fusobacterium periodonticum ATCC 33693] Length = 646 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 178/658 (27%), Positives = 304/658 (46%), Gaps = 85/658 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N IAAGE++E P+ IKELIENSLDA+S ++ + GG I+D+G Sbjct: 8 RIRILDESVSNAIAAGEVVENPTSMIKELIENSLDAKSKEIKLEVWNGGLD-ISISDSGC 66 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++++RH TSKI DD NI T+GFRGEAL SI +VS + L SR + G Sbjct: 67 GMSKEDLLLSIERHATSKIITKDDLFNIRTYGFRGEALSSIASVSKMILSSRTEDSPNGT 126 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G K+++++ + N GT +E++DLF+ PAR FL+ + E I D+ R A+A Sbjct: 127 QMNVLGGKVTNLKDIQKNVGTQIEIKDLFYNTPARKKFLRKDTTEYLNIKDIFLREALAN 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + + ++ I ++ G++++ N + + GY G Sbjct: 187 PNVKFILNIEGKESIR----TSGNGIENAILEIFGKNYLKNFSKFSL--------GYLGN 234 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N + +VFINGR+V+ K + + AY + G+YP ++ L+IDP ++DVNV Sbjct: 235 ANLFKANKDSIFVFINGRSVKSKIVEEAVIAAYHTKLMKGKYPSALIFLDIDPAEIDVNV 294 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP+K ++F N + I + + I+K + S ++ + KT +Y Sbjct: 295 HPSKKIVKFANQSAIYDLVKGEIEKFFSDDENFISP--HIEVEDEEVETFEEKTEKVEYP 352 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA------------------ 401 ++ ++ LS ++ DD + ND +E + Sbjct: 353 SNNFLDINDFKDEKQNLSQLSVVQKDDYLKKDYNDIKDEKQNIVNIDNVIKTSSNEIKEN 412 Query: 402 ---------------------------THYQLGIACAQIHQNYIISQTTDGLVI---VDQ 431 + +I ++ + D VI D Sbjct: 413 IETFKKVGSDFDLIEKEVETEKTKDKYIFKNEDTSRGKIFDDFSTLKNIDFRVIGQVFDT 472 Query: 432 HAAHERLIF----------EKMRQDFNSTKITSQTL-----LTPEIIDLLEGECALIMEH 476 ER E++ + + S ++ L P +L E L +E+ Sbjct: 473 FILVERNNLLEIYDQHIIHERILYEKLKQEYYSHSMTKQNLLVPIRFELDPREKQLALEN 532 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E G + F N I +R P + + + ++++I+D I + +D ENI Sbjct: 533 TEIFSSFGFDIDDFEKNEILLRTTPTMNLRDSYENIIKEILDNISKNRD----KDIRENI 588 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +M+C G+I++ K+ EM ++ ++ + C HGRP +K+ L D+EKLF R Sbjct: 589 IVSMSCKGAIKANHKLTIEEMYSMVAKLHEVGE-YTCPHGRPIIVKMSLLDLEKLFKR 645 >gi|157147861|ref|YP_001455180.1| DNA mismatch repair protein [Citrobacter koseri ATCC BAA-895] gi|166232083|sp|A8AMN1|MUTL_CITK8 RecName: Full=DNA mismatch repair protein mutL gi|157085066|gb|ABV14744.1| hypothetical protein CKO_03665 [Citrobacter koseri ATCC BAA-895] Length = 619 Score = 412 bits (1058), Expect = e-112, Method: Composition-based stats. Identities = 164/607 (27%), Positives = 275/607 (45%), Gaps = 47/607 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKMVRQYRAVAQDGQKERRLGALCGAPFLEQALVIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + R P VL LEIDP QVD Sbjct: 241 ADPHHTTAALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGGDRQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLDAPLPLAEEAPAPRHIPENRVAAGRN 360 Query: 345 --FHQDNAPKTHLPKYATSLTNT-----------QEKLFLQENRLSTNDLLPSDDPTYSE 391 +A + P+Y+TS T + + ++ LL + P Sbjct: 361 HFAEPASAREPAAPRYSTSSGATGGRQPAASWPHAQPGYQKQQGEVYRQLLQTPAPRQPA 420 Query: 392 DNDPVEESEA----THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 E + G + + + + + ++ A L ++ Sbjct: 421 LAPEAETAAPSLAGHSQSFGRVLTIVGADCALLERDGNIHLLALPVAERWLRQAQL--TP 478 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 T + +Q LL P + + E + + + L LGI+ + + IR +P L ++ Sbjct: 479 GQTPVCAQPLLIPLRLKVSAEEKSALEKAQTPLTDLGIEFQS-DAQHVTIRAVPLPLRQQ 537 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 N+ L+ ++I + S M+ + + + LL ++E+ Sbjct: 538 NLQILIPELIGYLAQQSAFDAGNIAQWIARNLMSEHP------QWTMAQAITLLADVERL 591 Query: 568 PNSSQCN 574 C Sbjct: 592 -----CP 593 >gi|194445394|ref|YP_002043614.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|238693596|sp|B4T2R5|MUTL_SALNS RecName: Full=DNA mismatch repair protein mutL gi|194404057|gb|ACF64279.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 618 Score = 412 bits (1058), Expect = e-112, Method: Composition-based stats. Identities = 151/555 (27%), Positives = 251/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+F S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTFNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ ++ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRALLQTPTT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKDALQQAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|260599482|ref|YP_003212053.1| DNA mismatch repair protein [Cronobacter turicensis z3032] gi|260218659|emb|CBA33989.1| DNA mismatch repair protein mutL [Cronobacter turicensis z3032] Length = 634 Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats. Identities = 164/623 (26%), Positives = 273/623 (43%), Gaps = 64/623 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 GGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQHEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + N R+ + G F+ A+ + + ++ L G+ Sbjct: 181 ARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGSICGPAFLEQALAIEWQHGDLALHGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + + P VL LEIDP QVD Sbjct: 241 AEPKATTAALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGIDQQPAYVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-SSVLSKKMISSFHQDNAPKTHL 355 VNVHPAK +RF ++ +FI Q + + ++ + S + +H +N Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAANPLSLNEPAEDAPRWHPENRVAAGK 360 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT--------------------------- 388 ++A +E+ ++E+ + + T Sbjct: 361 NQFADPAPRERERATIRESDAPRHASGGASAGTGRSGASNGGWPNATPGYQKQQGALYKQ 420 Query: 389 -----------------YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 E P E + G + +N + + L+++ Sbjct: 421 LLETPAVTSPVAPATAATRETAPPAPALEGHSHSFGRVLTLVSENVALLERDGKLMLLAL 480 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 A L ++ +Q LL P + + E ++ L RLGI+ Sbjct: 481 SVAERCLKQAQLLPR--DEAPCAQPLLIPVRLKISGDEREVMTRAQPQLARLGIEI-VLD 537 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRK 551 + + IR +P L ++N+ L+ ++I + Y + +A + I + Sbjct: 538 GHHVTIRAVPLPLRQQNLQILIPELIGYLAQQPNAYDA-----AVAGWLARHLVI--AQP 590 Query: 552 MQSIEMNRLLREMEKNPNSSQCN 574 + L E+E+ C Sbjct: 591 WSVAQAIATLAELERL-----CP 608 >gi|300362259|ref|ZP_07058435.1| DNA mismatch repair protein HexB [Lactobacillus gasseri JV-V03] gi|300353250|gb|EFJ69122.1| DNA mismatch repair protein HexB [Lactobacillus gasseri JV-V03] Length = 630 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 177/635 (27%), Positives = 292/635 (45%), Gaps = 53/635 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS ++ NQIAAGE+IERP+ +KEL ENSLDA SSR+ G + DNG Sbjct: 3 KIHELSPELTNQIAAGEVIERPASVVKELCENSLDAGSSRIRIDFIDAGLKQITVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKI+ D NI T GFRGEAL SI AVSH+ +++ N G Sbjct: 63 GIAKDQLDLAFTRHATSKIATERDLFNISTLGFRGEALASIAAVSHVEVIT-SSDNLGGV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G + + GT + V DLFF PARL +L+SE+ E I D++ R+A+ + Sbjct: 122 RAIFVGSEKKLQEDASSPKGTKISVSDLFFNTPARLKYLRSERTEILKIVDIVNRLALGH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+FT + K N + + I+ + G L S + + G Sbjct: 182 PDVAFTLTNNGKILLKTN---GRNDLRQDIANIYGRQLAEKMEVLKGTSPDFKITGLLSD 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + +NGR +++ + I Y + RYP+ V+ +E+DP VDVNV Sbjct: 239 PNTTRSNRNFISLLLNGRYIKNYRLTQAIIAGYGSKLRPRRYPIAVVNIELDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS------------------------- 334 HP K +R + + SI +A+++ S Sbjct: 299 HPTKQEVRLSKEQELERLLTTSISEALDQTSQINSGLNNLLTPKKSTNIDQLKFNLNKDV 358 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTN--------------TQEKLFLQENRLSTND 380 + + + + + + A S N + ++ ++ +LS D Sbjct: 359 VDTVRPVEFTPQMEADKSAEVHETAASFVNLDKVRNDDKYVITASWDENVDKQVQLSPFD 418 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 +E A + I Q ++Y++++ + L ++DQ AA+ RL + Sbjct: 419 EEKDIQGKDDSLISSGDEILANNLPELIYLGQT-KSYLVARHDEDLYLIDQIAAYRRLAY 477 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 +++ D NS I+ Q LL+P I+D + + E+ +L LGI E FG N++ +R Sbjct: 478 DQIFHDLNSENISQQGLLSPLILDFSNVDYLKLKENLNNLQELGIFLEDFGQNSLILRTY 537 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL--ATMACYGSIRSGRKMQSIEMN 558 P L + ++ + +R I+D ++ + I TM S R R + +E Sbjct: 538 PIWL-QPDVEKNVRMILDLYLNQNE-QDFTKLKAQIAGEITM--RQSTRR-RNLNPVEAQ 592 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 LL+++ + + Q G+ I+L +D+ K+F Sbjct: 593 ELLKDLRNSSDPYQDFEGKIIIIQLSENDLNKMFK 627 >gi|146310018|ref|YP_001175092.1| DNA mismatch repair protein [Enterobacter sp. 638] gi|167017340|sp|A4W5R1|MUTL_ENT38 RecName: Full=DNA mismatch repair protein mutL gi|145316894|gb|ABP59041.1| DNA mismatch repair protein MutL [Enterobacter sp. 638] Length = 613 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 157/573 (27%), Positives = 270/573 (47%), Gaps = 37/573 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTSEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + G R+ + G F+ A+ + + ++ ++G+ Sbjct: 181 ARFDVTINLSHNGKVMRQYRAVAEGGQKERRLGAICGTAFLEQALAIEWQHGDLAMRGWV 240 Query: 238 GIPT-FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P N A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPKTMNATLAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------ 344 VNVHPAK +RF ++ +FI Q + + ++ S L++ IS Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQA-EPSLPLTEDAISPRPIPENRVAAGR 359 Query: 345 ---FHQDNAPKTHLPKYATSLTNTQE--------KLFLQENRLSTNDLLPSDDPTYSED- 392 A + P+Y++ + + ++ ++ + LL + E+ Sbjct: 360 NQFAEPAVARQPEAPRYSSGASAPRPTGANYPHAPVYQKQQGALYSKLLDTPAVERKENV 419 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + G I + + + + ++ A ++++ + Sbjct: 420 APSAPALDGHSQSFGRVLTIIAPDMALLERDSHIALLALPVAERW--LKQVQLTPGTNAA 477 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 +Q LL P + + E A++ L +GI+ + + IR +P L ++N+ L Sbjct: 478 CAQPLLIPVRLKVSAEEVAVLNRAKAVLVEMGIEF-VVEAHHVTIRAVPLPLRQQNLQNL 536 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 + ++I + ++ MA + + Sbjct: 537 IPELIGYLAQQTSFDAANTAQW-----MARHLA 564 >gi|149196337|ref|ZP_01873392.1| DNA mismatch repair protein [Lentisphaera araneosa HTCC2155] gi|149140598|gb|EDM28996.1| DNA mismatch repair protein [Lentisphaera araneosa HTCC2155] Length = 639 Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 177/643 (27%), Positives = 303/643 (47%), Gaps = 61/643 (9%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + LS +I N+IAAGE++ERP+ +KEL++N++DA ++R+ G S +++DNG GM Sbjct: 5 KVLSAEIANRIAAGEVVERPASVLKELVDNAVDAGATRIIVRTENAGTSLIEVSDNGSGM 64 Query: 64 TSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + +++H TSKI+D D I ++GFRGEA+PS+ +VS T+++R + G I Sbjct: 65 NQNNALLCLEQHATSKITDASDLDAISSYGFRGEAIPSVASVSRFTILTRLHDDLEGTMI 124 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++G +I+SV + PGT + V LF+ +PAR FLKS++ E I + +MA++ P Sbjct: 125 QVNGGEIASVEKIGCAPGTCIRVAKLFYNVPARKKFLKSQRTEDFHIQETFIQMALSRPD 184 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 + K + + + + R+S + D + +E++ + I+++G P Sbjct: 185 IHMELHCDKRKVFNI---PPSQDTRTRLSSFVSRDQVKEMMEVDYQEAGISVKGLCSRPG 241 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 RGN+ + FIN R + I IR AY I G++ +L +EIDP +VD+NVHP Sbjct: 242 LARGNSREQRFFINQRPIIAPEINRAIRNAYEGIINKGQFAPCILYIEIDPSRVDINVHP 301 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP----- 356 AK +RFR P +I I S++ A+ + S +++ ++ Q + + L Sbjct: 302 AKREVRFREPQLICQVISHSLELALRQLSGSQQKLVAPTFLNPAIQVTSSRVSLSLDTAK 361 Query: 357 ----------------------------KYATSLTNTQEKLFLQENRLST-NDLLPSDDP 387 + S+ T+ + R N + S+ P Sbjct: 362 NLSENNELNKQQAEARKDLTSVNVDSQISHQNSVDLTKSEAVQHPPRKEEVNPVPSSNAP 421 Query: 388 TYSEDNDPVEESEATHY-------------QLGIACAQIHQNYIISQTTDGLVIVDQHAA 434 + + V ES+ + + Y+I Q +GL+I+ AA Sbjct: 422 QVNPAQNEVPESKPEIQSTSIEKKEFSHGLDKLDIISFYNSEYLICQGDNGLIILSLKAA 481 Query: 435 HERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA 494 ER++FE+M ++ S +Q LL P ++L + LI ++ L LG+ FG N Sbjct: 482 RERIVFEQMLNNYRSNIDHTQALLIPVSLELNHSDSHLIEKYHSQLSELGLGLRHFGANT 541 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY---GSIRSGRK 551 + P + N+ L+R IID + S + + LA C I+ Sbjct: 542 WLLDSTPLSFPEDNLFGLIRKIIDLLHHSPESLKRDIHLN--LAKTICKATSSHIKFNET 599 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++L E++K C GRP FI + ++++K FGR Sbjct: 600 SS----EKILLELDKCETPYSCPQGRPVFINISDNELKKRFGR 638 >gi|238795251|ref|ZP_04638834.1| DNA mismatch repair protein mutL [Yersinia intermedia ATCC 29909] gi|238725419|gb|EEQ16990.1| DNA mismatch repair protein mutL [Yersinia intermedia ATCC 29909] Length = 638 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 159/628 (25%), Positives = 275/628 (43%), Gaps = 70/628 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIHILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR + N Sbjct: 61 CGIGKEDLSLALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + R++ + G F+ +A+ ++ + ++T++G+ Sbjct: 181 ARFDVAINLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGDLTIRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++N R ++D+ I IR AY + + + P VL L+IDP QVDV Sbjct: 241 ADPAASRTLSEMQYCYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--------------------------- 330 NVHPAK +RF ++ +FI Q++ + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTTVLQQAASPVLNINEDGEEIEAPRWQPENRVAAG 360 Query: 331 ---ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ--------------- 372 + T P AT+ + +E+ Sbjct: 361 GNKYAQPEPAKASPAERTRVAEKVSTSEPTVATARSPAREQAAPGYSAGQPYQKQQGELY 420 Query: 373 ----ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 + + + + E +Y G +Y + + G+ + Sbjct: 421 RQLVQPAAVSQAVDQPAKASAPRSASTDEPLHGDNYSFGRVLTVFPPSYALIEYKQGVAL 480 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 + A L ++ + + Q LL P + L + E A + H L +GI+ Sbjct: 481 LALTVAERWLKQAQLNPP--AEGLRPQPLLIPLKLTLDKNEAAACLRHQNLLVTMGIELA 538 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSI 546 A +R + L ++N+ +L+ +++ + ++LAT +A + GS Sbjct: 539 VEQTRA-TLRAVSLPLRQQNLQKLIPELLGYLSQHEEISP------DVLATWIARHLGS- 590 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCN 574 + +LL ++E+ C Sbjct: 591 -EHEVWNVSQAIQLLTDVERL-----CP 612 >gi|217077091|ref|YP_002334807.1| DNA mismatch repair protein MutL [Thermosipho africanus TCF52B] gi|226723042|sp|B7IHA2|MUTL_THEAB RecName: Full=DNA mismatch repair protein mutL gi|217036944|gb|ACJ75466.1| DNA mismatch repair protein MutL [Thermosipho africanus TCF52B] Length = 568 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 171/595 (28%), Positives = 292/595 (49%), Gaps = 32/595 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+KL E +I +IAAGE++ P +KEL+ENSLDA ++++E I GGKS+ ++ DNG Sbjct: 3 KIKKLPEHVIGKIAAGEVVAGPYSVVKELVENSLDAGATKIEIEIKSGGKSYIKVKDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E++ +++ H TSKI+ DD N+ +FGFRGEAL SI VS + + S + Sbjct: 63 GMGREDLLLSIYEHTTSKINDFDDIYNLSSFGFRGEALASIAKVSRIVITSNNGSESHRL 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + K + P+ GTIVEV DLFF +PAR FLKSE E + + + + ++ Sbjct: 123 EAIGGKIKSVNEYPLV-EKGTIVEVYDLFFNVPARRKFLKSEATEKRYVVEYVEKFLLSN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F F Y N ER + E V+ N ++G Sbjct: 182 PDVEFIFRADNEIIYNARA----SNLEERFKLIFPE------VKEYTLINGKYVEGIISS 231 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P ++R N F+ R V DK + Y E + +P VL + + + VDVNV Sbjct: 232 PNYHRKNRTGQIFFVQKRFVMDKMLYYIFENGYGEAL--VDHPYGVLFINVPSKLVDVNV 289 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K ++F NP II + I +++++A+ K +SK++ + K+ + + Sbjct: 290 HPQKLEVKFSNPNIIYSDITRTVREALKKF-------VSKQIFVKPINEKKTKSEVSSFE 342 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 T N F + N + + + + + ++ + + Y++ Sbjct: 343 TKNVNFSNDSF----QDKFNSVFKESVNHVDYSKNMLFDISEKNLEVKNDVVILKKRYVL 398 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + DG+ I+D HAAHER+I+E++ + I L+ P I + + +++E ++ Sbjct: 399 FEMEDGIYIMDFHAAHERVIYEQILEKLK-VGIEKIDLIIPIEIKVGKSLKQIVIEKLDE 457 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L G + + ++ I IP+ + ++ + ++IID + +++I+A Sbjct: 458 LKENGFEIKVENE-SVKILSIPSFIKPSDVDDIFKEIID---EYRIPSMGTKNMKHIIAD 513 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC ++R+G + E +L+ E+ K N + C HGRP F+K+ ++I+K F R Sbjct: 514 KACKSAVRTGYDITEGEAKKLIEEVFK-RNLTTCPHGRPLFLKITFNEIDKYFDR 567 >gi|330831015|ref|YP_004393967.1| DNA mismatch repair protein mutL [Aeromonas veronii B565] gi|328806151|gb|AEB51350.1| DNA mismatch repair protein mutL [Aeromonas veronii B565] Length = 624 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 167/560 (29%), Positives = 276/560 (49%), Gaps = 33/560 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L + NQIAAGE++ERPS +KEL+ENSLDA + RVE I GG +I DNG Sbjct: 2 MPIRILPPILANQIAAGEVVERPSSVVKELVENSLDAGADRVEIDIDKGGAKLIRIRDNG 61 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK++ DD I++ GFRGEAL SI +VS LT SR + + Sbjct: 62 CGVAKDELVLALSRHATSKVATLDDLEGINSLGFRGEALASISSVSRLTFTSRTAEQSEA 121 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++S +++P A GT VEV DLFF PAR F++SE+ E I +++RR+A+ Sbjct: 122 WQAQAEGREMSVTIKPAAHPVGTTVEVVDLFFNTPARRKFMRSEKTEFAHIDELVRRIAL 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + + +T R++ V G FI++A+ + + +++ L G+ Sbjct: 182 SRFDATLILRHNGKVVRQYKAANTVPEQERRLAAVCGTPFIHHALAVESEHSDVRLWGWL 241 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R + Y ++NGR ++DK I IR AY E +P R+ VL +E+DPRQVDV Sbjct: 242 ATPEGARPQNDLQYTYVNGRMMRDKLINHAIRQAYDELLPPDRFAAYVLYIELDPRQVDV 301 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF +I +FI Q++ A+ ++G+ST+ + + +P+ P Sbjct: 302 NVHPAKHEVRFHQARLIHDFIFQALFTALRREGVSTAHQDTPLAETLVELPVSPQIEYPG 361 Query: 358 YATSL-------------------TNTQEKLFLQENRLSTNDLLP----------SDDPT 388 A + Q + + + T Sbjct: 362 QAPRPEWYGAEHSYRAPAQVREGGSGASRASNYQPPEPPSREAMHGMGALLTTLPIATAT 421 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + + + A + Q Y++ + + L ++ A ER++ + Sbjct: 422 EAAPAQSTDTVPSPKQGGCRALTLVEQAYLLIERDNQLALLSLVRA-ERVLLRHWLLETW 480 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + +Q LL P L + AL+ E + L R+G++ + G + + + +PA+L + + Sbjct: 481 GQGLAAQPLLLPVSFKLPKNLIALVTEQERLLKRMGLELKSGGRDTMILTRVPALLRQTD 540 Query: 509 IPQLLRDIIDEIIDSSTTYT 528 + +LL +++ I S + Sbjct: 541 LVRLLPELLQIIEGGSDSDA 560 >gi|238853827|ref|ZP_04644192.1| DNA mismatch repair protein MutL [Lactobacillus gasseri 202-4] gi|282852793|ref|ZP_06262135.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus gasseri 224-1] gi|238833522|gb|EEQ25794.1| DNA mismatch repair protein MutL [Lactobacillus gasseri 202-4] gi|282556535|gb|EFB62155.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus gasseri 224-1] Length = 630 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 180/633 (28%), Positives = 291/633 (45%), Gaps = 49/633 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS ++ NQIAAGE+IERP+ +KEL ENSLDA SSR+ G + DNG Sbjct: 3 KIHELSPELTNQIAAGEVIERPASVVKELCENSLDAGSSRIRINFIDAGLKQITVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKI+ D NI T GFRGEAL SI AVSH+ +++ N G Sbjct: 63 GIAKDQLNLAFTRHATSKIATERDLFNISTLGFRGEALASIAAVSHVEVIT-SSDNLGGV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G + A GT + V DLFF PARL +L+SE+ ET I D++ R+A+ + Sbjct: 122 RAIFVGSEKKLQEDAASPKGTKISVSDLFFNTPARLKYLRSERTETLKIVDIVNRLALGH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT + K N + + I+ + G L S + + G Sbjct: 182 PDVSFTLTNNGKILLKTN---GRNDLRQDIANIYGRQLAEKMEVLKGSSPDFKITGLLSD 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR +++ + I Y + RYP+ V+ +E+DP VDVNV Sbjct: 239 PNTTRSSRNFISLLLNGRYIRNYRLTQAIIAGYGSKLRPRRYPIAVVNIELDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS------------------------- 334 HP K +R + + SI +A+++ S Sbjct: 299 HPTKQEVRLSKEQELERLLTTSISEALDQNSQIDSGLNNLLTPKKSTNIDQLKFNLNKDV 358 Query: 335 ----------SVLSKKMISSFHQDNAPKTHLPKYATS----LTNTQEKLFLQENRLSTND 380 + + H+ A L K +T T ++ ++ +LS D Sbjct: 359 VDTVRPVEFTPQVEADKSAEVHETAASFVSLDKVRNDDKYVITATWDENVDKQVQLSPFD 418 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 +E A I Q ++Y++++ + L ++DQ AA+ RL + Sbjct: 419 EEKDLQGKDDSIISSGDEILANSLPELIYLGQT-KSYLVARHDEDLYLIDQVAAYRRLAY 477 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 +++ +D NS I+ Q LL+P I+D + + E+ +L LGI E FG N++ +R Sbjct: 478 DQIFRDLNSENISQQGLLSPLILDFSNVDYLKLKENLNNLQELGIFLEDFGQNSLILRTY 537 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 P L + ++ + +R I+D ++ + I + S R R + +E L Sbjct: 538 PIWL-QPDVEKNVRMILDLYLNQNE-QDFTKLKAQIAGEITLRQSTRR-RNLNPVEAQEL 594 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 L+ + + + Q G+ I+L +D+ K+F Sbjct: 595 LKNLRNSSDPYQDFEGKIIIIQLSENDLNKMFK 627 >gi|167554135|ref|ZP_02347876.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205321590|gb|EDZ09429.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 618 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 152/555 (27%), Positives = 253/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGTKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+F S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTFNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ +++ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAVGWPHAQPGYQKLQGEVYRALLQTPTT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|116629084|ref|YP_814256.1| DNA mismatch repair ATPase [Lactobacillus gasseri ATCC 33323] gi|122273918|sp|Q045Q4|MUTL_LACGA RecName: Full=DNA mismatch repair protein mutL gi|116094666|gb|ABJ59818.1| DNA mismatch repair protein MutL [Lactobacillus gasseri ATCC 33323] Length = 630 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 180/633 (28%), Positives = 291/633 (45%), Gaps = 49/633 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS ++ NQIAAGE+IERP+ +KEL ENSLDA SSR+ G + DNG Sbjct: 3 KIHELSPELTNQIAAGEVIERPASVVKELCENSLDAGSSRIRINFIDAGLKQITVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKI+ D NI T GFRGEAL SI AVSH+ +++ N G Sbjct: 63 GIAKDQLNLAFTRHATSKIATERDLFNISTLGFRGEALASIAAVSHVEVIT-SSDNLGGV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G + A GT + V DLFF PARL +L+SE+ ET I D++ R+A+ + Sbjct: 122 RAIFVGSEKKLQEDAASPKGTKISVSDLFFNTPARLKYLRSERTETLKIVDIVNRLALGH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT + K N + + I+ + G L S + + G Sbjct: 182 PDVSFTLTNNGKILLKTN---GRNDLRQDIANIYGHQLAEKMEVLKGSSPDFKITGLLSD 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR +++ + I Y + RYP+ V+ +E+DP VDVNV Sbjct: 239 PNTTRSSRNFISLLLNGRYIRNYRLTQAIIAGYGSKLRPRRYPIAVVNIELDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS------------------------- 334 HP K +R + + SI +A+++ S Sbjct: 299 HPTKQEVRLSKEQELERLLTTSISEALDQNSQIDSGLNNLLTPKKSTNIDQLKFNLNKDV 358 Query: 335 ----------SVLSKKMISSFHQDNAPKTHLPKYATS----LTNTQEKLFLQENRLSTND 380 + + H+ A L K +T T ++ ++ +LS D Sbjct: 359 VDTVRPVEFTPQVEADKSAEVHETAASFVSLDKVRNDDKYVITATWDENVDKQVQLSPFD 418 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 +E A I Q ++Y++++ + L ++DQ AA+ RL + Sbjct: 419 EEKDLQGKDDSIISSGDEILANSLPELIYLGQT-KSYLVARHDEDLYLIDQVAAYRRLAY 477 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 +++ +D NS I+ Q LL+P I+D + + E+ +L LGI E FG N++ +R Sbjct: 478 DQIFRDLNSENISQQGLLSPLILDFSNVDYLKLKENLNNLQELGIFLEDFGQNSLILRTY 537 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 P L + ++ + +R I+D ++ + I + S R R + +E L Sbjct: 538 PIWL-QPDVEKNVRMILDLYLNQNE-QDFTKLKAQIAGEITLRQSTRR-RNLNPVEAQEL 594 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 L+ + + + Q G+ I+L +D+ K+F Sbjct: 595 LKNLRNSSDPYQDFEGKIIIIQLSENDLNKMFK 627 >gi|238797610|ref|ZP_04641107.1| DNA mismatch repair protein mutL [Yersinia mollaretii ATCC 43969] gi|238718607|gb|EEQ10426.1| DNA mismatch repair protein mutL [Yersinia mollaretii ATCC 43969] Length = 630 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 163/620 (26%), Positives = 277/620 (44%), Gaps = 62/620 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR + N Sbjct: 61 CGINKEDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + R++ + G F+ +A+ ++ + +++T++G+ Sbjct: 181 ARFDVAINLSHNGKLMRQYRAATDPSQHERRLASICGPAFLQHALAISWQHDDLTIRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++N R ++D+ I IR AY + + + P VL L+IDP QVDV Sbjct: 241 ADPAASRTLSEMQYCYVNSRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG---ISTSSVLSKKMISSFHQDNAPKTH 354 NVHPAK +RF ++ +FI Q++ + + ++ + + + +N Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTTVLQQAATPVLNVNEDGEEIEAPRWQPENRVAAG 360 Query: 355 LPKYATSLTN---TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE------------- 398 + KYA E+ E S + T E Sbjct: 361 VNKYAQPEPTKTLPIERNAATERVSSVREHAAPAYSTGQPYQKQQGELYRQLVQPAVMTP 420 Query: 399 ----------------------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + HY G Y + + G+ ++ A Sbjct: 421 PAELRAPVVAPPKPRPTPADAPLQGDHYSFGRVLTVFPPCYALIEYKQGIALLALKVAER 480 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 L ++ + Q LL P + L + E A H L +GI+ Sbjct: 481 WLKQAQLNPPPE--GLRPQPLLIPLKLTLAKNEAAACQRHQNLLMTMGIELAVEHGRG-T 537 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSGRKMQS 554 +R + L ++N+ +L+ +++ + + LAT +A Y GS Sbjct: 538 LRAVSLPLRQQNLQKLIPELLGYLSQHEEISP------DALATWIARYLGS--EHEVWNV 589 Query: 555 IEMNRLLREMEKNPNSSQCN 574 + +LL ++E+ C Sbjct: 590 SQAIQLLTDVERL-----CP 604 >gi|160902075|ref|YP_001567656.1| DNA mismatch repair protein MutL [Petrotoga mobilis SJ95] gi|189030404|sp|A9BJB9|MUTL_PETMO RecName: Full=DNA mismatch repair protein mutL gi|160359719|gb|ABX31333.1| DNA mismatch repair protein MutL [Petrotoga mobilis SJ95] Length = 621 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 173/631 (27%), Positives = 312/631 (49%), Gaps = 48/631 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+I+ L+ +++ +IAAGE++ PS +KEL+ENSLDA++ + I GGKS ++ DNG Sbjct: 1 MRIKVLNPEVVMKIAAGEVVSGPSSVVKELVENSLDAQADSITVEILDGGKSLIKVDDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM EE+ +++ H TSKI +D + TFGFRGEAL SI VS + + S+PP+ G Sbjct: 61 IGMEEEELELSILPHTTSKIFSIEDLYKLKTFGFRGEALSSISRVSRMKMTSKPPEKEVG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + I G KI + V + GT +E+ DLFF IPAR FLKS+ E +T++I + A Sbjct: 121 TMLEILGGKIIEKKRVNSSNGTKIEIMDLFFNIPARRKFLKSDSAEGRYVTEIIEKFAFT 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 ++ T+ YK S++ + + ++ E ++ +E+ + + G Sbjct: 181 N-NINLTYIRDHKEIYKF---SSDMDLITKCLKIYPELKRDDLIEIEHNDSLCKISGVIS 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P R N + F+N R ++ + S + T Y E + +P ++ +EI P VDVN Sbjct: 237 QPKVGRNNRTAQHFFVNNRYIKVASLYSVLETGYGEILEKSIHPYGIIFIEIPPDMVDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K ++F + ++ + + + +++++ K T ++ ++ + + Y Sbjct: 297 VHPQKLEVKFTDEQMVASLLKKVVRESLKKNTHFTMEFINSNDTIDLNKKTSSFSVQNLY 356 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ------------- 405 + ++ +K+ +N +T+ +D+ + + + ++E + Sbjct: 357 NKNESS--QKVDFSQNPTNTDYFENTDEFFNNSEIEDLQEEQNHFDNSYKLYEPSKTFDF 414 Query: 406 ---------------------LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 + + Y++ + D L++VD HAAHER I+E +R Sbjct: 415 KGFEYQKNQTFTPVEKINSLEKLRILGIVAERYLVVEGEDKLLLVDFHAAHERYIYEILR 474 Query: 445 QDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 ++ +TS LLTP II L E +I+E+ + L +LGIK E I ++ +P++ Sbjct: 475 ENVYEKGGLTSDLLLTPVIIALDEVRKGIILENKDHLEKLGIKLEE-DEKEIIVKGLPSL 533 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 + + +L+ +I D++ S + ++ LATMAC ++++ M LL Sbjct: 534 VKIDDAERLIFEIADDLR-ISNFDQQPNILDKNLATMACRAAVKTRD--NPTGMETLLNT 590 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + C HGRP I++ ++K FGR Sbjct: 591 IFE-KKLLTCPHGRPIMIQITFKTLDKYFGR 620 >gi|197247369|ref|YP_002149273.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|238690036|sp|B5F385|MUTL_SALA4 RecName: Full=DNA mismatch repair protein mutL gi|197211072|gb|ACH48469.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 618 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 151/555 (27%), Positives = 251/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEDIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ ++ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGTSGGNGGRQSAGGWPHAQPGYQKPQGEVYRTLLQTPAT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQQAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|161505138|ref|YP_001572250.1| DNA mismatch repair protein [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189030408|sp|A9MFP2|MUTL_SALAR RecName: Full=DNA mismatch repair protein mutL gi|160866485|gb|ABX23108.1| hypothetical protein SARI_03272 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 618 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 156/555 (28%), Positives = 256/555 (46%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQSEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVARDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A E + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALAEIQYCYVNGRMMRDRLINHAIRQACEEKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHPAK +RF ++ +FI Q + + ++ +T + +N Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRN 360 Query: 357 KYATSLTNTQEK----------------------------LFLQENRLSTNDLLPSDDPT 388 +A + T + Q+ + L Sbjct: 361 HFAEPVVPTAAREPATPRYSGGASGGSGGRQSVGGWSHAQPGYQKQQGEVYRALLQTPAA 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 S + G + + + + + ++ A L ++ Sbjct: 421 SSTPEPVAPALDGHSQSFGRVLTIVGGDCALLEHGGNIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKASLQKAQPFLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|322615521|gb|EFY12441.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618581|gb|EFY15470.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622006|gb|EFY18856.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627730|gb|EFY24521.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631037|gb|EFY27801.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637744|gb|EFY34445.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642408|gb|EFY39012.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644023|gb|EFY40571.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650491|gb|EFY46899.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653544|gb|EFY49872.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659730|gb|EFY55973.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662059|gb|EFY58275.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666192|gb|EFY62370.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672612|gb|EFY68723.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676042|gb|EFY72113.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680526|gb|EFY76564.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684580|gb|EFY80584.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192895|gb|EFZ78121.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197229|gb|EFZ82369.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201654|gb|EFZ86718.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206168|gb|EFZ91130.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213177|gb|EFZ97979.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215550|gb|EGA00294.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219535|gb|EGA04020.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227838|gb|EGA11992.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229008|gb|EGA13137.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236380|gb|EGA20456.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238715|gb|EGA22767.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241834|gb|EGA25863.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248017|gb|EGA31954.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254652|gb|EGA38463.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258289|gb|EGA41966.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263565|gb|EGA47086.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265839|gb|EGA49335.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270283|gb|EGA53731.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 618 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 155/555 (27%), Positives = 256/555 (46%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHPAK +RF ++ +FI Q + + ++ +T + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRN 360 Query: 344 ----SFHQDNAPKTHLPKYATSLTN-----------TQEKLFLQENRLSTNDLLPSDDPT 388 A ++ P+Y+ + + Q+ + L T Sbjct: 361 HFAVPAEPTAARESATPRYSGGASGDNGGRQSAGGWPHAQPGYQKQQGEVYRALLQTPTT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQQAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|166366968|ref|YP_001659241.1| DNA mismatch repair protein [Microcystis aeruginosa NIES-843] gi|238687544|sp|B0JS91|MUTL_MICAN RecName: Full=DNA mismatch repair protein mutL gi|166089341|dbj|BAG04049.1| DNA mismatch repair protein [Microcystis aeruginosa NIES-843] Length = 550 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 157/598 (26%), Positives = 272/598 (45%), Gaps = 66/598 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L + +I+ IAAGE+I+ ++EL+EN++DA + R+ I+ Q++DNG Sbjct: 4 PIQVLPQDVIDLIAAGEVIDSLGAVVRELVENAIDAGADRITIDISPQN-WRIQVSDNGR 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ + H TSKI DD I + GFRGEAL SI V+HL + SR + Sbjct: 63 GMSREDLQLCSYAHSTSKIRQRDDLWQITSLGFRGEALHSIAQVAHLRVASRHDDDLGCY 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + ++ + + GTIV V +LF P R L S + I +I A+ + Sbjct: 123 CLYNHQGEPGNLETIPIAIGTIVTVENLFGNFPVRRQALPSINKQLKDIQTLIHNFALCH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVE-LNEKSNEITLQGYT 237 P++++ + +++ P+ + + D + ++ + ++ Sbjct: 183 PQITWQVFQDHQDWLRISPGKDASQILPQLVKSLHFNDLASLKLDLTTPDAESAQIELVI 242 Query: 238 GIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 G+P +R + + +NGR V+ + I A+A T+P RYPV L L ++PR +D Sbjct: 243 GLPDRISRHQPDWVRIAVNGRMVRSSELEQAIFEAFARTVPKDRYPVCFLHLHLNPRSID 302 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 N HPAK+ I N + II +I KA+ + ++ P+ Sbjct: 303 WNRHPAKAEIYLHNLIFWQEQIISAIDKALG-----------------LNPEHIPEKAQN 345 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 + + + E+ + + E + A AQIHQ Sbjct: 346 QRVSQILKAAEE----------------------KSTYTIGEKSPKNRLELKAVAQIHQT 383 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 YI+++ GL +V+QH AHER+++E++ ++ + + +L L Sbjct: 384 YIVAEHPHGLWLVEQHIAHERVLYERLEDNWEIVPLDTPIIL-----------NQLTTRQ 432 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L RLG++ FG + AIR IP +L ++ D D +++ S LQ Sbjct: 433 IEQLQRLGLEIASFGDRSWAIRSIPVLLKERE------DRADALLELSLGGDLQTAQ--- 483 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AT AC +IR+G + EM LL + + N C HGRP ++ L+ + + + F R Sbjct: 484 VAT-ACRSAIRNGTALSLKEMQNLLDDWQNTRNPRTCPHGRPIYLSLEETSLARFFRR 540 >gi|204927343|ref|ZP_03218545.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204324008|gb|EDZ09203.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 618 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 151/555 (27%), Positives = 251/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ ++ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRALLQTPAT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQQAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|62182805|ref|YP_219222.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224586199|ref|YP_002639998.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|81309508|sp|Q57GM1|MUTL_SALCH RecName: Full=DNA mismatch repair protein mutL gi|254766174|sp|C0Q6C7|MUTL_SALPC RecName: Full=DNA mismatch repair protein mutL gi|62130438|gb|AAX68141.1| enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|224470727|gb|ACN48557.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322717307|gb|EFZ08878.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 618 Score = 409 bits (1050), Expect = e-111, Method: Composition-based stats. Identities = 152/555 (27%), Positives = 251/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ T+ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQTAGGWPHAQPGYQKQQGEVYRALLQTPTT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPVPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQQAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|159029449|emb|CAO90828.1| mutL [Microcystis aeruginosa PCC 7806] Length = 550 Score = 409 bits (1050), Expect = e-111, Method: Composition-based stats. Identities = 156/598 (26%), Positives = 272/598 (45%), Gaps = 66/598 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L + +I+ IAAGE+I+ ++EL+EN++DA + R+ I+ Q++DNG Sbjct: 4 PIQVLPQDVIDLIAAGEVIDSLGAVVRELVENAIDAGADRISIDISPQN-WRIQVSDNGR 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ + H TSKI DD I + GFRGEAL SI V+ L + SR + Sbjct: 63 GMSREDLQLCSYAHSTSKIRQRDDLWQITSLGFRGEALHSIAQVARLRVASRHDDDLGCY 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + ++ + + GTIV V +LF P R L S + I +I A+ + Sbjct: 123 CLYNHRGEPDNLETIPIAIGTIVTVENLFGNFPVRRQALPSINKQLKDIQTLIHNFALCH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEI-TLQGYT 237 P +++ + +++ P+ + + D + ++L E+ ++ Sbjct: 183 PHITWQVFQDHQDWLRISPGKDASQILPQLVKSLHFNDLASLNLDLTTPDAELAQIELVI 242 Query: 238 GIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 G+P +R + + +NGR V+ + I A+A T+P RYP L L ++PR +D Sbjct: 243 GLPDRISRHQPDWVKIAVNGRMVRSSELEQAIFQAFARTVPKDRYPACFLHLHLNPRSID 302 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 N HPAK+ I N + II +I K++ + ++ P+ Sbjct: 303 WNRHPAKAEIYLHNLVFWQEQIISAIDKSLG-----------------LNPEHIPEKAQN 345 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 + + + E+ + + E + A AQIHQ Sbjct: 346 QRVSQILKAAEE----------------------KSTYIIGEKSRKNRLELKALAQIHQT 383 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 YI+++ +GL +V+QH AHER+++E++ ++ + + +L L Sbjct: 384 YIVAEHPNGLWLVEQHIAHERVLYERLEDNWEIVPLDTPIIL-----------NQLTTRQ 432 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L RLG++ FG + AIR IP +L ++ D D +++ S LQ Sbjct: 433 IEQLQRLGLEVAGFGDRSWAIRSIPVLLKERE------DRADALLELSLGGDLQTAQ--- 483 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AT AC +IR+G + EM LL + + N C HGRP ++ L+ + + + F R Sbjct: 484 VAT-ACRSAIRNGTALSLEEMQNLLDDWQNTRNPRTCPHGRPIYLSLEETSLARFFRR 540 >gi|56416150|ref|YP_153225.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197365076|ref|YP_002144713.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81821550|sp|Q5PL49|MUTL_SALPA RecName: Full=DNA mismatch repair protein mutL gi|238690786|sp|B5BKH9|MUTL_SALPK RecName: Full=DNA mismatch repair protein mutL gi|56130407|gb|AAV79913.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197096553|emb|CAR62163.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 618 Score = 408 bits (1049), Expect = e-111, Method: Composition-based stats. Identities = 152/555 (27%), Positives = 251/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ T+ + Q+ + L T Sbjct: 361 HFAVPAEPTTAREPATPRYSGGASGGNGGRQTAGGWPHAQPGYQKQQGEVYRALLQTPTT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEAVAPALDGHSQSFGRVLTIVCGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|200389232|ref|ZP_03215844.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199606330|gb|EDZ04875.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 618 Score = 408 bits (1049), Expect = e-111, Method: Composition-based stats. Identities = 151/555 (27%), Positives = 251/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEDIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ ++ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQPGYQKQQSEVYRALLQTPAT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|169334039|ref|ZP_02861232.1| hypothetical protein ANASTE_00432 [Anaerofustis stercorihominis DSM 17244] gi|169258756|gb|EDS72722.1| hypothetical protein ANASTE_00432 [Anaerofustis stercorihominis DSM 17244] Length = 659 Score = 408 bits (1049), Expect = e-111, Method: Composition-based stats. Identities = 177/658 (26%), Positives = 313/658 (47%), Gaps = 70/658 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+KLS+++IN+I+AGE++ P+ IKEL+ENS+DA + ++ I GGK+ ++DNG G Sbjct: 5 IKKLSDELINKISAGEVVVSPASVIKELVENSIDAGADHIKIKIENGGKTKILVSDNGIG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + S+E+ +A ++ TSKI D S+I T GFRGEAL SI VS + + S+ N G Sbjct: 65 IKSDEMGLAFNKNATSKIDSLDKLSSIDTLGFRGEALFSISVVSKVKIRSKYKDENIGTS 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + K+ +++ +A+N GT +EV DLF+ PAR +KS + E D+I ++AIA P Sbjct: 125 ATVINGKVQNIKNLALNTGTRIEVEDLFYNTPARRKHMKSAKAEKTASLDIISKLAIANP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F+ + + + N +S ++G +F++ +E++ +T++G+T P Sbjct: 185 SIAFSVYSDNKEVFVTL---GDNNIRNVVSVILGHEFVSKMIEVDYDDEPLTVKGFTLSP 241 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP-LGRYPVVVLLLEIDPRQVDVNV 299 + + INGR V++ + I Y E + VL + + DVN+ Sbjct: 242 NYLDRQNEESIFIINGRYVKNDTLNKVINNIYREQYGLFTKRISYVLYIRLPYNFTDVNI 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINK------------------------KGISTSS 335 HPAK+ I FRN T+I I + ++ A+ + S+S Sbjct: 302 HPAKTSISFRNETLINMLICEGVRSALRESINLNDNVIGERKKKENPLENQIAFEESSSY 361 Query: 336 VLSKKMIS-----------------------SFHQDNAPKTHLPKYATSLTNTQEKLFLQ 372 V+ K IS + D ++ Y T Sbjct: 362 VVGDKDISIVSYNEEIKIEKKEIGEDNINEEASKSDIINTDYIASYDKYSEPTYFNESSS 421 Query: 373 ENRLSTNDLLPSD----------------DPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 + S +D L D + E + V+ S + Sbjct: 422 TSYTSFDDNLIQDIPIINPTENNLSLNRNEEVPKEQKNIVDRSIFDKIINMHFVGTAFKA 481 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y I ++ + L ++D HA+HER++++K +F ++ +Q L++P +++L + + H Sbjct: 482 YAIFESGETLYVMDTHASHERVLYDKYLSEFKKHRVKTQILVSPLVLELSVIHKDICLNH 541 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 + L LG + E F N + IREIP +LS ++ +++ +++ + D+S +R E + Sbjct: 542 LKLLKSLGYEIEDFAGNNVIIREIPEMLSLEDTKEVILNLLASLKDTSMLTNEINRNERL 601 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + AC+ ++R + E +LL +++ + N C H RPT K+K EK+F R Sbjct: 602 IKN-ACHHAVRGHDDISKEEAIKLLNDLKLSDNPFSCPHSRPTISKIKKKYFEKMFQR 658 >gi|229845405|ref|ZP_04465536.1| DNA mismatch repair protein [Haemophilus influenzae 6P18H1] gi|229811713|gb|EEP47411.1| DNA mismatch repair protein [Haemophilus influenzae 6P18H1] Length = 629 Score = 408 bits (1049), Expect = e-111, Method: Composition-based stats. Identities = 164/620 (26%), Positives = 284/620 (45%), Gaps = 70/620 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ ++ K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIIRQYRPAEQLNQQLKRVAAICGDDFVKNALRIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + S + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISHALNNQEQLNWHTEQSAVENHEENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN---------------------------------- 379 P A + N+ + ++ + + Sbjct: 361 IRPNRAAAGQNSFAPQYHEKPQQNQPHFSNTPVFPNHVSTGYRDYRSDAPSKTEQRLYAE 420 Query: 380 -----------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D+ + S+ + A + I ++ Q + Sbjct: 421 LLRTLPPTAQKDISNTAQQNISDTAKIISTEIIECSSHLRALSLIENRALLLQQNQDFFL 480 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK-A 487 + E+L + + +I Q LL P + L E + ++ +D ++G + Sbjct: 481 LSL----EKLQRLRWQLALKQIQIEQQPLLIPIVFRLTESQFQAWQQYSDDFKKIGFEFI 536 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR 547 E + + ++P+ L +N+ + + +++ +SS + + A + C Sbjct: 537 ENQAQLRLTLNKVPSALRTQNLQKCVMEMLTRDENSS------SFLTALCAQLECKT--- 587 Query: 548 SG---RKMQ-SIEMNRLLRE 563 + E RLL + Sbjct: 588 FNALADALNLLSETERLLTQ 607 >gi|161617629|ref|YP_001591594.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168244863|ref|ZP_02669795.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194450332|ref|YP_002048402.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|189030409|sp|A9N4Y4|MUTL_SALPB RecName: Full=DNA mismatch repair protein mutL gi|238690633|sp|B4TFA4|MUTL_SALHS RecName: Full=DNA mismatch repair protein mutL gi|161366993|gb|ABX70761.1| hypothetical protein SPAB_05492 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194408636|gb|ACF68855.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205336318|gb|EDZ23082.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 618 Score = 408 bits (1049), Expect = e-111, Method: Composition-based stats. Identities = 151/555 (27%), Positives = 251/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEDIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ ++ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRALLQTPTT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEAVAPALDGHSQSFGRVLTIVCGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|16763178|ref|NP_458795.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144657|ref|NP_807999.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213428674|ref|ZP_03361424.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213621067|ref|ZP_03373850.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648967|ref|ZP_03379020.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852837|ref|ZP_03382369.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289829983|ref|ZP_06547434.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|20455099|sp|Q8Z187|MUTL_SALTI RecName: Full=DNA mismatch repair protein mutL gi|25327610|pir||AG1048 DNA mismatch repair protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505486|emb|CAD06836.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29140296|gb|AAO71859.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 618 Score = 408 bits (1049), Expect = e-111, Method: Composition-based stats. Identities = 155/555 (27%), Positives = 255/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHPAK +RF ++ +FI Q + + ++ +T + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRN 360 Query: 344 ----SFHQDNAPKTHLPKYATSLTN-----------TQEKLFLQENRLSTNDLLPSDDPT 388 A + P+Y+ + + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSDGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRTLLQTPTT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|168464757|ref|ZP_02698660.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195632933|gb|EDX51387.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 618 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 151/555 (27%), Positives = 251/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETALPLEEIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ ++ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRALLQTPTT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|197265698|ref|ZP_03165772.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197243953|gb|EDY26573.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 618 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 155/555 (27%), Positives = 257/555 (46%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ +A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEHALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHPAK +RF ++ +FI Q + + ++ +T + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRN 360 Query: 344 ----SFHQDNAPKTHLPKYA-----------TSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 A + P+Y+ ++ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSCGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRALLQTPAT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|318607423|emb|CBY28921.1| DNA mismatch repair protein MutL [Yersinia enterocolitica subsp. palearctica Y11] Length = 635 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 159/625 (25%), Positives = 281/625 (44%), Gaps = 67/625 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA++SR++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDADASRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR + N Sbjct: 61 CGIGKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + R++ + G F+ +A+ ++ + ++T++G+ Sbjct: 181 ARFDVAINLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGDLTIRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++N R ++D+ I IR AY + + + P VL L+IDP QVDV Sbjct: 241 ADPAASRTLSEMQYCYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS------------------------- 332 NVHPAK +RF ++ +FI Q++ + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTTVLQQTAAPLLNINEDGEEIEAPRWQPENRVAAG 360 Query: 333 --------TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE----------- 373 + + SS + A + + + T + E Q+ Sbjct: 361 VNKYAQPEPAKTVPVVRTSSPERTVATERSIARERTPTYHAGEPYQKQQGELYRQLVQPA 420 Query: 374 --NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 N+ + + + E + +Y G Y + + G+ +++ Sbjct: 421 VVNKPAAVSQPSAASAPVARQISTDEPLQGDNYSFGRVLTVFPPCYALIEYKQGIALLEL 480 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 A L ++ + + Q LL P + L + E H + L +GI+ Sbjct: 481 TVAERWLKQAQLNPP--AEGLRPQPLLIPLKLTLDKNEATACQRHQKLLVTMGIELAVEH 538 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSG 549 A +R + L ++N+ +L+ +++ + + LAT ++ + GS Sbjct: 539 ARA-TLRAVSLPLRQQNLQKLIPELLGYLSQHEEISP------DALATWISRHLGS--EH 589 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCN 574 + +LL ++E+ C Sbjct: 590 EVWNVSQAIQLLTDVERL-----CP 609 >gi|168822514|ref|ZP_02834514.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205341068|gb|EDZ27832.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320088786|emb|CBY98544.1| DNA mismatch repair protein mutL [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 618 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 152/555 (27%), Positives = 251/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ T+ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQTAGGWPHAQPGYQKQQGEVYRALLQTPAT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|205355117|ref|YP_002228918.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|238690494|sp|B5R9B7|MUTL_SALG2 RecName: Full=DNA mismatch repair protein mutL gi|205274898|emb|CAR39965.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326630274|gb|EGE36617.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 618 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 151/555 (27%), Positives = 251/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ ++ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRALLQTPAT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|198245330|ref|YP_002218243.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|207859505|ref|YP_002246156.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238690365|sp|B5FRM6|MUTL_SALDC RecName: Full=DNA mismatch repair protein mutL gi|238690435|sp|B5R0N7|MUTL_SALEP RecName: Full=DNA mismatch repair protein mutL gi|197939846|gb|ACH77179.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|206711308|emb|CAR35686.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326626048|gb|EGE32393.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 618 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 151/555 (27%), Positives = 251/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ ++ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRALLQTPAT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|15789473|ref|NP_279297.1| DNA mismatch repair protein [Halobacterium sp. NRC-1] gi|169235188|ref|YP_001688388.1| DNA mismatch repair protein [Halobacterium salinarum R1] gi|20455147|sp|Q9HSM6|MUTL_HALSA RecName: Full=DNA mismatch repair protein mutL gi|229486323|sp|B0R2S6|MUTL_HALS3 RecName: Full=DNA mismatch repair protein mutL gi|10579807|gb|AAG18777.1| DNA mismatch repair protein [Halobacterium sp. NRC-1] gi|167726254|emb|CAP13036.1| DNA mismatch repair protein [Halobacterium salinarum R1] Length = 659 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 171/650 (26%), Positives = 282/650 (43%), Gaps = 66/650 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L + + +IAAGE++ERP+ +KEL+ENSLDA ++ V+ + GG + D+G Sbjct: 4 RIRALDDATVARIAAGEVVERPASVVKELVENSLDAGAASVDVSVDAGGTDRIVVADDGR 63 Query: 62 GMTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 GMT +++ MAV++H TSK+ D + T GFRGEAL +IG+V+ LT+ +RP +TG Sbjct: 64 GMTGDDLRMAVRQHTTSKLDDASGLDGVGTLGFRGEALYTIGSVAELTVTTRPRNAGDTG 123 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 A+I + SV P GT VEV DLF PAR +LK E + + R A+A Sbjct: 124 ARITVDHGDAGSVAPAGHPAGTTVEVTDLFGETPARRKYLKRAATEFGHVNRAVTRYALA 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN---AVELNEKSNEITLQG 235 P V+ + + + + G+ + V G + + + + G Sbjct: 184 NPDVAVSLTHDGREVF---ATTGTGDVQDAALAVYGREVAQSLRTVDADPAADSVERVHG 240 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y P R F+NGR V D + + Y + + RYP VL ++ V Sbjct: 241 YVSDPEVTRSTREYLATFVNGRAVTDAVLREAVLDGYGDQLAPDRYPFAVLFVDC--EGV 298 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS---KKMISSFHQDNAP- 351 D NVHP K +RF + ++ + ++ A+ G+ + K + +++P Sbjct: 299 DANVHPRKLEVRFEDEAGVKAAVEAGVRDALLDAGLVRAGAPRGASKPGDAEISPEHSPT 358 Query: 352 ----------------------------KTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 + P A E + T + Sbjct: 359 DRDAGAAGGGDAAGQSDGNGQRTAASGATSESPASAFETGGGDEAADSAASTDGTRERPG 418 Query: 384 SDDPTYSEDNDPVEE-------------------SEATHYQLGIACAQIHQNYIISQTTD 424 S + + D E SE Q+H Y++++ D Sbjct: 419 SGTESRTGRFDAPAENARLPTGAGGPEADDQDTTSERDSLPDLRVLGQLHDTYVVAEAGD 478 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GLV+VDQHAA ER+ +E+++ + SQ L+ P ++L GE A+ L LG Sbjct: 479 GLVLVDQHAADERVHYERLQARVDG---ASQALVAPAELELTAGEAAVFEAALGGLRELG 535 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 AE G + +PA+L+ +L RD++ + + + D + +LA +AC Sbjct: 536 FDAELAG-RTARVTAVPAVLADALDAELARDVLSSFLADADGTPVADAADAVLADLACSP 594 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +I+ + + LL ++ N C HGRPT +++ ++ F R Sbjct: 595 AIKGNTSLAEGSVVALLDALDACENPYACPHGRPTIVEVDGDELAARFER 644 >gi|238910517|ref|ZP_04654354.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 618 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 151/555 (27%), Positives = 251/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ ++ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGTSGGNGGRQSAGGWPHAQPGYQKQQGEVYRTLLQTPAT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|156932401|ref|YP_001436317.1| DNA mismatch repair protein [Cronobacter sakazakii ATCC BAA-894] gi|166232088|sp|A7MMA2|MUTL_ENTS8 RecName: Full=DNA mismatch repair protein mutL gi|156530655|gb|ABU75481.1| hypothetical protein ESA_00180 [Cronobacter sakazakii ATCC BAA-894] Length = 635 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 160/625 (25%), Positives = 270/625 (43%), Gaps = 67/625 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 AGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTADQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A GT +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMEVTIKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + N R+ + G F+ +A+ + + ++ L+G+ Sbjct: 181 ARFDVTINLSHNGKMMRQYRAVQGNAPRERRLGSICGPAFLEHALAIEWQHGDLALRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + + P VL LEIDP QVD Sbjct: 241 AEPKGTTAALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGIDQQPAYVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHPAK +RF ++ +FI Q + + ++ + S L++ + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVVSVLQQQAANPLS-LNEPAEDAPRFQPENRVAAG 359 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDD------------------------------ 386 K + +E++ +EN + Sbjct: 360 KNQFADPAPRERVSARENDAPRYSSGGASAGSNAGRSAASNGGWPHATPGYQKQQGALYK 419 Query: 387 -----------------PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + E + + G + +N + + L+++ Sbjct: 420 QLLETPAVTPPPAAPSVTSAREVMPSAPALDGHSHSFGRVLTLVSENVALLERDGKLMLL 479 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 A L ++ +Q LL P + + E ++ L RLGI+ Sbjct: 480 ALSVAERYLKQAQLLPH--DEAPCAQPLLIPVRLKISGDERDIMTRAQPQLARLGIEI-V 536 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 + + IR +P L ++N+ L+ ++I + I +A + I Sbjct: 537 LDGHHVTIRAVPLPLRQQNLQILIPELIGYLAQQPNADDA-----AIAGWLARHLVI--A 589 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCN 574 + + L E+E+ C Sbjct: 590 QPWSVAQAIATLAELERL-----CP 609 >gi|260654147|ref|ZP_05859637.1| DNA mismatch repair protein MutL [Jonquetella anthropi E3_33 E1] gi|260631132|gb|EEX49326.1| DNA mismatch repair protein MutL [Jonquetella anthropi E3_33 E1] Length = 590 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 167/612 (27%), Positives = 275/612 (44%), Gaps = 43/612 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+I++L +++ +IAAGE++ERP +KELIENSLDA + + + GGK+ + D+G Sbjct: 1 MRIQRLPDELARKIAAGEVVERPMSVVKELIENSLDAGAKTIRVELVQGGKTLISVCDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +++ +AV++H TSKIS D I + G+RGEAL SI AVS L L SR + TG Sbjct: 61 SGISPDDLLLAVEKHATSKISTESDLEAISSLGYRGEALASIAAVSRLELYSRERSSQTG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 A + S + +V P+A+ GT V V+DLF+ +PAR FLKS E I+ +++ A+ Sbjct: 121 AGLTYSDGR-PAVHPMALPAGTTVTVKDLFYNLPARRKFLKSALAEYRRISRLLQDYALC 179 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P VSF + +G + Q+ G++ + + L Sbjct: 180 WPYVSFELVNDGQTSFSSRA---DGTVEGALLQMWGKEPQIEKAQGEVNGSVAELW---- 232 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 G+ Q +F+NGR V D + + I + P L L I +VDVN Sbjct: 233 RQDTGPGSRFQLILFVNGRRVSDGAVRAAILSH-----PWASRGNWFLKLTIPADEVDVN 287 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL--- 355 VHPAK+ + FR + + + ++ ++ S + +++ PK Sbjct: 288 VHPAKTEVLFRKGSEVFELVRKTAEEFGRGFTQLPLSGPAAPKETAWRPSEGPKDFFRSI 347 Query: 356 -PKYATSLTNTQEKLFLQENRLSTNDLLPS----------DDPTYSEDNDPVEESEATHY 404 P + + + Q+ +S +D S + T + + E Sbjct: 348 DPPFRVASPSAQKSSVQLRGVVSLSDPAASIAAEAMGTEAERGTEAGWKNEPAELFPDEK 407 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 + Q+ Q Y++ Q L++VD HAAHER+ FE+ Q S + Sbjct: 408 PQVLYFGQMSQGYLVFQDEQSLLVVDPHAAHERVNFERFSQGVKSGPAERL----AVHLP 463 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP-QLLRDIIDEIID- 522 L E+ +DL LG + + ++P +LLR + + D Sbjct: 464 LTPDVRRQAEENKKDLDSLGFGFDE----QFQLAQVPCHAGVSAGAMELLRGALAAVEDG 519 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 L DR A AC S++ ++ E +LL ++E + C HGRPT ++ Sbjct: 520 QDAGRPLIDR----WAMKACKASVKLTTRLTPQEACQLLSDLESCQQPTACPHGRPTVLR 575 Query: 583 LKLSDIEKLFGR 594 L ++ FGR Sbjct: 576 LTAQALDDHFGR 587 >gi|332160020|ref|YP_004296597.1| DNA mismatch repair protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664250|gb|ADZ40894.1| DNA mismatch repair protein [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 635 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 159/625 (25%), Positives = 281/625 (44%), Gaps = 67/625 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA++SR++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDADASRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR + N Sbjct: 61 CGIGKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQNEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + R++ + G F+ +A+ ++ + ++T++G+ Sbjct: 181 ARFDVAINLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGDLTIRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++N R ++D+ I IR AY + + + P VL L+IDP QVDV Sbjct: 241 ADPAASRTLSEMQYCYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS------------------------- 332 NVHPAK +RF ++ +FI Q++ + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTTVLQQTAAPLLNINEDGEEIEAPRWQPENRVAAG 360 Query: 333 --------TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE----------- 373 + + SS + A + + + T + E Q+ Sbjct: 361 VNKYAQPEPAKTVPVVRTSSPERTVATERSIARERTPTYHVGEPYQKQQGELYRQLVQPA 420 Query: 374 --NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 N+ + + + E + +Y G Y + + G+ +++ Sbjct: 421 VVNKPAAVSQPSAASAPVARQISTDEPLQGDNYSFGRVLTVFPSCYALIEYKQGIALLEL 480 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 A L ++ + + Q LL P + L + E H + L +GI+ Sbjct: 481 TVAERWLKQAQLNPP--AEGLRPQPLLIPLKLTLDKNEATACQRHQKLLVTMGIELAVEH 538 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSG 549 A +R + L ++N+ +L+ +++ + + LAT ++ + GS Sbjct: 539 ARA-TLRAVSLPLRQQNLQKLIPELLGYLSQHEEISP------DALATWISRHLGS--EH 589 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCN 574 + +LL ++E+ C Sbjct: 590 EVWNVSQAIQLLTDVERL-----CP 609 >gi|168231394|ref|ZP_02656452.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472742|ref|ZP_03078726.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194459106|gb|EDX47945.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205334209|gb|EDZ20973.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 618 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 151/555 (27%), Positives = 251/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEDIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ ++ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRALLQTPAT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVTPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|145629068|ref|ZP_01784867.1| DNA mismatch repair protein [Haemophilus influenzae 22.1-21] gi|145639644|ref|ZP_01795247.1| DNA mismatch repair protein [Haemophilus influenzae PittII] gi|144978571|gb|EDJ88294.1| DNA mismatch repair protein [Haemophilus influenzae 22.1-21] gi|145271201|gb|EDK11115.1| DNA mismatch repair protein [Haemophilus influenzae PittII] gi|309750614|gb|ADO80598.1| DNA mismatch repair protein MutL [Haemophilus influenzae R2866] Length = 629 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 164/620 (26%), Positives = 284/620 (45%), Gaps = 70/620 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKITDLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ ++ K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIIRQYRPAEELSQQLKRVAAICGDDFVKNALRIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + S + + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISYALNNQEQLNWHTDQSAVENREENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN---------------------------------- 379 P A + N+ + ++ + + Sbjct: 361 IRPNRAAAGQNSFAPQYHEKPQQNQPHFSNTPVLPNHVSTGYRDYRSDAPSKTEQRLYAE 420 Query: 380 -----------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D+ + S+ + A + I ++ Q + Sbjct: 421 LLRTLPPTAQKDISDTAQQNISDTAKIISTEIIECSSHLRALSLIENRALLLQQNQDFFL 480 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK-A 487 + E+L + + +I Q LL P + L E + ++ +D ++G + Sbjct: 481 LSL----EKLQRLQWQLALKQIQIEQQPLLIPIVFRLTEAQFQAWQQYSDDFKKIGFEFI 536 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR 547 E + + ++P+ L +N+ + + ++ +SS + + A + C Sbjct: 537 ENQAQLRLTLNKVPSALRTQNLQKCVMAMLTRDENSS------SFLTALCAQLECKT--- 587 Query: 548 SG---RKMQ-SIEMNRLLRE 563 + E RLL + Sbjct: 588 FNALADALNLLSETERLLTQ 607 >gi|145300256|ref|YP_001143097.1| DNA mismatch repair protein [Aeromonas salmonicida subsp. salmonicida A449] gi|166231102|sp|A4SR27|MUTL_AERS4 RecName: Full=DNA mismatch repair protein mutL gi|142853028|gb|ABO91349.1| DNA mismatch repair protein MutL [Aeromonas salmonicida subsp. salmonicida A449] Length = 627 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 168/569 (29%), Positives = 273/569 (47%), Gaps = 36/569 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L + NQIAAGE++ERPS +KEL+ENSLDA + RVE I GG +I DNG Sbjct: 1 MPIRILPPILANQIAAGEVVERPSSVVKELVENSLDAGADRVEIDIDKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK++ DD I + GFRGEAL SI +VS LT SR + Sbjct: 61 CGVAKDELVLALSRHATSKVATLDDLEGICSLGFRGEALASISSVSRLTFTSRTQDQSEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G +++ +V+P A GT VEV DLFF PAR F++SE+ E I +++RR+A+ Sbjct: 121 WQAQAEGREMNVTVKPAAHPVGTTVEVVDLFFNTPARRKFMRSEKTEFAHIDELVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + +T R++ V G F+++A+ + + +++ L G+ Sbjct: 181 SRFDVTLILRHNGKVMRQYKAANTVAEQERRLAAVCGTPFMHHALAVESEHSDVRLWGWL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P R + Y ++NGR ++DK I IR AY E +P R+ VL +E+DP QVDV Sbjct: 241 ALPEGARPQNDLQYTYVNGRMMRDKLINHAIRQAYDELLPTDRFAAYVLYIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---------------SVLSKKMI 342 NVHPAK +RF +I +FI Q++ A+ ++G+S + S + Sbjct: 301 NVHPAKHEVRFHQARLIHDFIFQALFTALRREGVSAAHQEEPLAETLVELPVSGQIEYPG 360 Query: 343 SSFHQDNAPKTHLPKYATSLTNTQE-----KLFLQENRLSTNDLLPS------------D 385 + + H + S +E Q + + + S Sbjct: 361 QAPRPEWYGAEHSYRAPASTNEVREGSAARAGNYQPPEPPSREAMRSMGALLTTLPGAGP 420 Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 S V + A + + + DG + + ERL+ Sbjct: 421 ASAASATAAMVPSAAAQTAPGVWQALTLVEQAYLLLVRDGQLALLSLVRAERLLLRNWLL 480 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 + + +Q LL P L + AL+ + L R+G++ + G + + + +PA+L Sbjct: 481 EAWGQGLAAQPLLLPVSFKLPKNLIALVEAQERLLKRMGLELKSGGRDTMILTRVPALLR 540 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 + ++ +LL +++ II+S + E Sbjct: 541 QTDLVRLLPELLQ-IIESGSDSDASQLAE 568 >gi|295425863|ref|ZP_06818543.1| DNA mismatch repair protein HexB [Lactobacillus amylolyticus DSM 11664] gi|295064466|gb|EFG55394.1| DNA mismatch repair protein HexB [Lactobacillus amylolyticus DSM 11664] Length = 631 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 166/629 (26%), Positives = 289/629 (45%), Gaps = 44/629 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+ENS+DA +SR+ G + DNG Sbjct: 7 KIHELSEALTNQIAAGEVIERPASVVKELVENSIDAGASRIRIDFMDAGLKQIVVQDNGT 66 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A RH TSKI++ D N+ T GFRGEAL SI AV+H+ +++ + G Sbjct: 67 GIARDQIDLAFTRHATSKINNERDLFNVSTLGFRGEALASISAVAHVEMIT-AAADEIGT 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + G + A GT + V+DLF PARL +L+S + E I D++ R+++ Y Sbjct: 126 KAVFVGGNKKTEEDAAARKGTKITVKDLFLNTPARLKYLRSPRTEMMKIVDIVNRISLGY 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SFT S + NGN + ++ V G + ++ + G Sbjct: 186 PQISFTLSNAGK---VLLRTPGNGNLAQTVANVYGRHIAEKMIPFKNADSDFQVSGLMSR 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N + +NGR +++ + + I Y + YPVVV+ +++DP VDVNV Sbjct: 243 PELTRSTRNFISILLNGRYIRNFRLNTAIMEGYGSKLTARHYPVVVVAIKVDPLLVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS----------VLSKKMISSFHQDN 349 HP K +R + I +I + + + L ++ + +Q+ Sbjct: 303 HPTKQEVRLSKEKELSRLITAAISDNLISHPEQSDAFANLKTNRQETLVDQLKFNLNQNV 362 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP-----TYSEDNDPVEESEATHY 404 T P T +L ++ + DL + T + ++ ++++ T + Sbjct: 363 VNTTRQPTPEIHEKVTPTELTPKKAKTKYVDLSIPREDDRYVITTTWADNIAKQTQLTPF 422 Query: 405 QLGIACAQIH--------------------QNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 G + ++ + YII++ L ++DQ AA RL +EK+ Sbjct: 423 GKGKSDKEVISTGDETLATSLPELQYLGQTKTYIIAEDNGDLFLIDQLAARRRLTYEKIY 482 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 Q KI Q LLTP +++ + I +++ ++GI E FG ++ +R P + Sbjct: 483 QTLLEKKIVQQGLLTPLVLEFGNLDFLQIKSKIDEIKKIGIFLEDFGQDSFIMRSYPTWI 542 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 ++ +R I+D + + T I A A I + + E LL ++ Sbjct: 543 -HGDVEGSVRKILDSYLTFAH-QTETTLFAKIAALQA-RKEITGHVDLSAGENVSLLADL 599 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 K+ + G+ +++ +D+ K+F Sbjct: 600 RKSSDPYHDADGKVVLVRISQNDLRKMFK 628 >gi|117617892|ref|YP_855465.1| DNA mismatch repair protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166231101|sp|A0KGR9|MUTL_AERHH RecName: Full=DNA mismatch repair protein mutL gi|117559299|gb|ABK36247.1| DNA mismatch repair protein MutL [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 622 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 169/559 (30%), Positives = 282/559 (50%), Gaps = 32/559 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L + NQIAAGE++ERPS +KEL+ENSLDA + RVE I GG +I DNG Sbjct: 1 MPIRILPPILANQIAAGEVVERPSSVVKELVENSLDAGADRVEIDIDKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK++ DD I++ GFRGEAL SI +VS LT SR + + Sbjct: 61 SGVAKDELVLALSRHATSKVATLDDLEGINSLGFRGEALASISSVSRLTFTSRTAEQSEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++S +++P A GT VEV DLFF PAR F++SE+ E I +++RR+A+ Sbjct: 121 WQAQAEGREMSVTIKPAAHPVGTTVEVVDLFFNTPARRKFMRSEKTEFAHIDELVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + +T R++ V G F++ A+ + + +++ L G+ Sbjct: 181 SRFDVTLILRHNGKVVRQYKAANTVAEQERRLAAVCGSPFMHYALAVESEHSDVRLWGWL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R + Y ++NGR ++DK I IR AY E +P R+ VL +E+DPRQVDV Sbjct: 241 ATPEGARPQNDLQYTYVNGRMMRDKLINHAIRQAYDELLPADRFAAYVLYIELDPRQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK------------------ 339 NVHPAK +RF +I +FI Q++ A+ ++G ++ L++ Sbjct: 301 NVHPAKHEVRFHQARLIHDFIFQALFTALRQQGAASDEPLAETLVELPVSAPIEYPGQAP 360 Query: 340 --KMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 + + H AP + + +++ + +R + + + P+ Sbjct: 361 RAEWYGAEHNYRAPAREVREGSSTGRAGNYQPPEPPSREAMRGMGSLLTTLPAVQGTPLA 420 Query: 398 ESE--------ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 E+E A + Q Y++ + + L ++ A ERL+ + Sbjct: 421 EAETAPVAAAVPAKAGAWRALTLVEQAYLLLERDNRLALLSLVRA-ERLLLRHWLLETWG 479 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 + +Q LL P L + AL+ + D L R+G++ + G + + + +PA+L + ++ Sbjct: 480 QGLAAQPLLLPVSFKLPKNLVALVEQQDRLLKRMGLELKSGGRDTMILTRVPALLRQTDL 539 Query: 510 PQLLRDIIDEIIDSSTTYT 528 +LL +++ I S + Sbjct: 540 VRLLPELLQLIESGSDSDA 558 >gi|260770597|ref|ZP_05879529.1| DNA mismatch repair protein MutL [Vibrio furnissii CIP 102972] gi|260614427|gb|EEX39614.1| DNA mismatch repair protein MutL [Vibrio furnissii CIP 102972] Length = 649 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 158/577 (27%), Positives = 268/577 (46%), Gaps = 60/577 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 CGIDKDELGLALSRHATSKIHTLDDLEAIISLGFRGEALASISSVSRLTLTSRTATQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMQVQLQPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+F + T +RI+ V G F+ N +++ + L G+ Sbjct: 181 SRFDVTFNLRHNGKLVRQYRAAKTEIQLEKRIAAVCGSAFVRNMLKIELAHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPDGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRPDQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK------------------ 339 NVHPAK +RF ++ +FI Q++ A+ + + ++ Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALAESQHIDAPTHNESAFHYHDEPEQTSAISER 360 Query: 340 ---------------------------------KMISSFHQDNAPKTHLPKYATSLTNTQ 366 K + A + + ++ + +Q Sbjct: 361 VTQAVESTPAYPGRSDYERPAREATRDQVREASKHSAWVESSQAKRKPAQERVSAPSPSQ 420 Query: 367 EKLFLQENRLSTNDLL----PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQT 422 ++ + + T D+ P+ ++ P+E T QLG A A + Y++ T Sbjct: 421 AEVRAYQALMQTPDVASPTPDEHHPSTPLEHTPLEHETFTVQQLGKAIAVVRGCYLLMNT 480 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 G V++ A + ++ + + SQ LL P + + E + + L + Sbjct: 481 PQGCVLLSLRVAAWLRVRGQL--NAQHEPLKSQPLLVPLSLKMSASEANALEQSQPLLTQ 538 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 LG++ + P ++ + +P L ++N+ L+ D++ Sbjct: 539 LGLELKPRHPGSLMVMGVPQPLRQQNLQLLIPDLLSY 575 >gi|261867646|ref|YP_003255568.1| DNA mismatch repair protein [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412978|gb|ACX82349.1| DNA mismatch repair protein MutL [Aggregatibacter actinomycetemcomitans D11S-1] Length = 616 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 171/579 (29%), Positives = 286/579 (49%), Gaps = 49/579 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LS ++ NQIAAGE++ERP+ +KEL+ENSLDA + +++ I GG +I DNG Sbjct: 1 MTIRILSPQLANQIAAGEVVERPASVVKELVENSLDAGADKIQIDIENGGAGLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+D D I + GFRGEAL SI +VS LTL SR + + Sbjct: 61 IGIAKEELALALARHATSKIADLADLEAILSLGFRGEALASISSVSRLTLTSRTAEQSEA 120 Query: 119 AQIAISGEKISS-VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + ++P + GT VEV +LFF PAR FL+SE+ E + I +VIRR+A+ Sbjct: 121 WQVYAQGRDMKTIIQPASHPVGTTVEVANLFFNTPARRKFLRSEKTEFSHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A ++FT + + T+ +R++ + G+DFI NA++++ K +++ L G+ Sbjct: 181 AKFHINFTLTHNGKVLRQYKSAVTHEQKLKRVAAICGQDFIQNALQIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P FNR + Y ++NGR V+DK I IR AYA+ + +YP VL ++++P +VDV Sbjct: 241 ALPQFNRPQNDLNYCYVNGRMVRDKTITHAIRQAYADYLTTEQYPAFVLFIDLNPNEVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS-TSSVLSKKMISSFHQDNAPKTHLP 356 NVHP K +RF+ ++ +FI Q I A+ + I T S + + AP P Sbjct: 301 NVHPTKHEVRFQQSRLVHDFITQGISNALASEQIHLTPSSMENAVEEPAGVWEAPTYTKP 360 Query: 357 KYATSLTN-------------------------TQEKLFLQENR---------LSTNDLL 382 + + N F +EN L+ + L Sbjct: 361 NRSAAGQNIFAPTTGYSATAYAEKKNDGTQKHRQSSPHFYRENAHREQITQNVLNAHKTL 420 Query: 383 PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 + + + E + A A I+ ++ Q ++ + Sbjct: 421 WTALKNQPQTEMTIAEVSKPNTDFLHALALINDEALLLQQGQHFYLLSLARLQHLKLELN 480 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-ERFGPNAIAIREIP 501 + SQ LL P I L + ++ ++G E + I ++++ Sbjct: 481 LTLAPT-----SQPLLIPIIFRLSNDQWQAWLQQKTFFEQIGFTFTEEATQHKITLQKVS 535 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 A L ++N+ Q++ +++ I++ L + + +LA++ Sbjct: 536 AHLRQQNLQQIIISLLNHSIEN-----LPEFLTALLASL 569 >gi|238757517|ref|ZP_04618702.1| DNA mismatch repair protein mutL [Yersinia aldovae ATCC 35236] gi|238704279|gb|EEP96811.1| DNA mismatch repair protein mutL [Yersinia aldovae ATCC 35236] Length = 635 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 160/625 (25%), Positives = 272/625 (43%), Gaps = 67/625 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ ++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR N Sbjct: 61 CGISKADLSLALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTADQNEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + R++ + G F+ +A+ ++ + ++T++G+ Sbjct: 181 ARFDVAINLSHNGKLVRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGDLTIRGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R Y ++N R ++D+ I IR AY + + + P VL L+IDP QVDV Sbjct: 241 ADPAASRTLTEMQYCYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--------------------------- 330 NVHPAK +RF ++ +FI Q++ + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTTVLQQTATPVLSINDDGEEIEAPRWQPENRIAAG 360 Query: 331 -------------------ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFL 371 + + S++ S T Q +L+ Sbjct: 361 VNKYAQPEPVKANPAEYVVPAARAESSERTTGSPRAAREHVTPAYHAGQPYQKQQGELYR 420 Query: 372 QENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 Q + + D E + Y G I Y + + + ++ Sbjct: 421 QLVQPAAVDTPIDVITAPRHRLPADEPLQGDSYSFGRVLTIIASCYALIEYQQSVALLAL 480 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 A L ++ + Q LL P + L + E A + H L +GI+ Sbjct: 481 PVAERGLKQAQLTPPPQ--GLRPQPLLIPLKLTLDKHEAAAGLRHQNLLVTMGIELAVEH 538 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSG 549 A +R + L ++N+ +L+ +++ + + LAT +A + GS Sbjct: 539 SRA-TLRAVSLPLRQQNLQKLIPELLGYLSQHEEISP------DALATWIARHLGS--EH 589 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCN 574 + +LL ++E+ C Sbjct: 590 EVWNVSQAIQLLTDVERL-----CP 609 >gi|167995169|ref|ZP_02576259.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205327102|gb|EDZ13866.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261249450|emb|CBG27315.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996690|gb|ACY91575.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160848|emb|CBW20379.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915457|dbj|BAJ39431.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222675|gb|EFX47747.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132697|gb|ADX20127.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332991170|gb|AEF10153.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 618 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 150/555 (27%), Positives = 250/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETALPLEEIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ ++ + Q+ + L Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRTLLQTPTA 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPESVTPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|16767605|ref|NP_463220.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|127553|sp|P14161|MUTL_SALTY RecName: Full=DNA mismatch repair protein mutL gi|154186|gb|AAA27166.1| mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16422919|gb|AAL23179.1| enzyme in methyl-directed mismatch repair [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] Length = 618 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 154/555 (27%), Positives = 252/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHPAK +RF ++ +FI Q + + ++ + + Q+N Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETALPLEEIAPAPRHVQENRIAAGRN 360 Query: 357 KYATSLTNTQEK----------------------------LFLQENRLSTNDLLPSDDPT 388 +A T + Q+ + L Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRTLLQTPTA 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPESVTPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|168239735|ref|ZP_02664793.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194734797|ref|YP_002117300.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|238693674|sp|B4TSF0|MUTL_SALSV RecName: Full=DNA mismatch repair protein mutL gi|194710299|gb|ACF89520.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197287601|gb|EDY26993.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 618 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 150/555 (27%), Positives = 250/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEDIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ ++ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRTLLQTPAT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKVALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|219944613|gb|ACL55048.1| MutL [Salmonella enterica subsp. enterica serovar Heidelberg] Length = 618 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 151/555 (27%), Positives = 250/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y +NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCHVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEDIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ ++ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRALLQTPTT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEAVAPALDGHSQSFGRVLTIVCGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|148827220|ref|YP_001291973.1| DNA mismatch repair protein [Haemophilus influenzae PittGG] gi|166232091|sp|A5UFN4|MUTL_HAEIG RecName: Full=DNA mismatch repair protein mutL gi|148718462|gb|ABQ99589.1| DNA mismatch repair protein [Haemophilus influenzae PittGG] Length = 629 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 163/620 (26%), Positives = 283/620 (45%), Gaps = 70/620 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ ++ K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIIRQYRPAEELNQQLKRVAAICGDDFVKNALRIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 AKPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + S + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISYALNNQEQLNWHTDQSAVENHEENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN---------------------------------- 379 P A + N+ + ++ + + Sbjct: 361 IRPNRAAAGQNSFAPQYHEKPQQNQPHFSNTPVFPNHVSTGYRDYRSDAPSKIEQRLYAE 420 Query: 380 -----------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D+ + S+ + A + I ++ Q + Sbjct: 421 LLRTLPPTAQKDISDTAQQNISDTAKIISTEIIECSSHLRALSLIENRALLLQQNQDFFL 480 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK-A 487 + E+L + + +I Q LL P + L E + ++ ++ ++G + Sbjct: 481 LSL----EKLQRLQWQLALKQIQIEQQPLLIPIVFRLTEAQFQAWQQYSDNFKKIGFEFI 536 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR 547 E + + ++P+ L +N+ + + ++ +SS + + A + C Sbjct: 537 ENQAQLRLTLNKVPSALRTQNLQKCVMAMLTRDENSS------SFLTALCAQLECKT--- 587 Query: 548 SG---RKMQ-SIEMNRLLRE 563 + E RLL + Sbjct: 588 FNTLADALNLLSETERLLTQ 607 >gi|258649208|ref|ZP_05736677.1| DNA mismatch repair protein MutL [Prevotella tannerae ATCC 51259] gi|260850473|gb|EEX70342.1| DNA mismatch repair protein MutL [Prevotella tannerae ATCC 51259] Length = 612 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 160/597 (26%), Positives = 272/597 (45%), Gaps = 29/597 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RPS +KELIENS+DAESS ++ I GKS QI DNG G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPSSIVKELIENSIDAESSLIQVFITDAGKSCVQIVDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKIS D + T GFRGEAL SI AV+ + L +R + G Sbjct: 65 MSEMDARLSFERHATSKISTPSDLFALKTMGFRGEALASIAAVAQVELKTRTEEEELGIC 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G +I S VA G VR++FF IPAR FLKS Q E I R+A+A P Sbjct: 125 VDVEGGRIKSQSVVACPVGANFSVRNIFFNIPARRKFLKSNQTEMGSIMSEFERLALANP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+F S + GNF +RI + G + + K+ ++++G+ G P Sbjct: 185 SVAFKLYNNNSLLIDLPA----GNFRQRIKALFGSKLDEQLMSIEVKTELVSIKGFVGSP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + F+NGR ++ + I+TA+ IP + LE+DP ++DVN+H Sbjct: 241 NSS-KKKCHQFFFVNGRYMRHNYFAKAIQTAFERLIPENEQIPYFVALEVDPSRIDVNIH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST---SSVLSKKMISSFHQDN------AP 351 P K+ I+F++ I ++ +++A+ K +K ++ F + P Sbjct: 300 PTKTEIKFQDEGAIWQVVLACVREALGKYAAVPLIEFDTNNKPVMPVFEPIDKAQVLSPP 359 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 + H+ + + ++ + L + + + E ++T + Sbjct: 360 QVHINQNFNPFNKERSHQNTRQVESNWERDLDRLFQSRRSELSALTEEQSTLLAKSPSLE 419 Query: 412 QIH------------QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 +I+ GL++V+QH A R++++ + + SQ +L Sbjct: 420 GFDVDDLSDKYMQLLGRFILLPVKSGLMLVEQHRADVRILYDYYLRQIKNQAGPSQGILF 479 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P+ I E + + L +G + +R IP+ +I LL +I+ E Sbjct: 480 PQTIHFSPTEKVYLEKILLPLTDIGFDLTQQTNGEYEVRGIPSGTEGLDISDLLLNIVQE 539 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 + + + ++ T+A +I G + + EM L++ + + G Sbjct: 540 LKQ-GNIEAINEIHHHVALTLASKSAIPIGEALSNEEMGNLMQRLFACECPNYGPDG 595 >gi|269836849|ref|YP_003319077.1| DNA mismatch repair protein MutL [Sphaerobacter thermophilus DSM 20745] gi|269786112|gb|ACZ38255.1| DNA mismatch repair protein MutL [Sphaerobacter thermophilus DSM 20745] Length = 578 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 162/606 (26%), Positives = 264/606 (43%), Gaps = 54/606 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L ++ +IAAGE+IERP+ +KEL+EN+LDA + ++ + GGG + +++D+G Sbjct: 11 PIRVLPAPVVARIAAGEVIERPASVVKELVENALDAGARQIRIDVQGGGLALIRVSDDGC 70 Query: 62 GMTSEEIPMAVQRHCTSKIS-DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ ++++P+A RH TSK+ DD + T GFRGEALPSI V+ LTL+S + G + Sbjct: 71 GIPADQMPLACARHATSKLPDDDLEQVRTLGFRGEALPSIATVAELTLVSATDNSGVGHR 130 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G ++ P + GT V VR LF +PARL Q E I+ +RR+A+A P Sbjct: 131 LVLRGGSVAVSEPAPRSRGTTVTVRHLFQNVPARLASCGRPQTEIREISQTVRRLALAAP 190 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE-LNEKSNEITLQGYTGI 239 V + G+ E + V G + + + G Sbjct: 191 HVRMSLYIDGRLTLH---TDGGGDLGEALVAVYGAALSGRLIPLGPIEVASARIAGVVAG 247 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R Q +NGR VQ + +L+ + TAY +P GR+PV+ + +++ P VD+N+ Sbjct: 248 PEVTRPGRGQITFIVNGRAVQPRGLLAQVETAYRPVLPRGRHPVLAVTIDVPPGLVDINI 307 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +R R I I + I+ A+ + P + A Sbjct: 308 HPAKLEVRLRAEREIGAAIGEMIRDALGR--------------QPLPLRAEPAVGVAALA 353 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 +L + E D Q+ ++ Sbjct: 354 PTLAHLAEA---------------------RPVWDDDAPIITPGLPPLRLIDQVQGRLLL 392 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + DGL +VDQH AHER+IFE + L P +++L + A +D Sbjct: 393 LEGDDGLYLVDQHRAHERVIFEHLVARHGDGGPEPVALPEPLLLELRPAQVARFARRLDD 452 Query: 480 LHRLGIKAERFGPNAIAIREIPAIL------------SKKNIPQLLRDIIDEIIDSSTTY 527 L LG + E FG +R PA+ L+ +++ + S Sbjct: 453 LAALGFQCESFGGRMFLLRAAPALPGVFTTPGDTALAGVGETDGLVAELVA--LADSEPG 510 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 + + +L +AC ++R GR ++ M L+ + + C HG P I + + Sbjct: 511 EGEGWRQELLVRLACRSAVRRGRHLERPAMRALVEALGHTRAPAVCPHGSPLLIHVSDTL 570 Query: 588 IEKLFG 593 +E+ FG Sbjct: 571 LERQFG 576 >gi|145630634|ref|ZP_01786413.1| DNA mismatch repair protein [Haemophilus influenzae R3021] gi|144983760|gb|EDJ91210.1| DNA mismatch repair protein [Haemophilus influenzae R3021] Length = 629 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 164/620 (26%), Positives = 283/620 (45%), Gaps = 70/620 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKITDLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ ++ K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIIRQYRPAEELSQQLKRVAAICGDDFVKNALRIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + S + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISYALNNQEQLNWHTDQSAVENHEENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN---------------------------------- 379 P A + N+ + ++ + + Sbjct: 361 IRPNRAAAGQNSFAPKYYEKPQQNQPHFSNTPVLPNHVSTGYRDYRSDAPSKTEQRLYAE 420 Query: 380 -----------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D+ + S+ + A + I ++ Q + Sbjct: 421 LLRTLPPTEQRDISNTAQQNISDTAKIISTEIIECSSHLRALSLIENRALLLQQNQDFFL 480 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK-A 487 + E+L + + +I Q LL P + L E + ++ +D ++G + Sbjct: 481 LSL----EKLQRLQWQLALKQIQIEQQPLLIPIVFRLTEAQFQAWQQYSDDFKKIGFEFI 536 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR 547 E + + ++P+ L +N+ + + ++ +SS + + A + C Sbjct: 537 ENQAQLRLTLNKVPSALRTQNLQKCVMAMLTRDENSS------SFLTALCAQLECKT--- 587 Query: 548 SG---RKMQ-SIEMNRLLRE 563 + E RLL + Sbjct: 588 FNALADALNLLSETERLLTQ 607 >gi|168263289|ref|ZP_02685262.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205348021|gb|EDZ34652.1| DNA mismatch repair protein MutL [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 618 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 151/555 (27%), Positives = 252/555 (45%), Gaps = 35/555 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------------------- 328 VNVHPAK +RF ++ +FI Q + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRN 360 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + ++ +++ + Q+ + L T Sbjct: 361 HFAVPAEPTAAREPATPRYSGGASGGNGGRQSAVGWPHAQPGYQKLQGEVYRALLQTPTT 420 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + G + + + + + ++ A L ++ Sbjct: 421 SPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--TPG 478 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + + +Q LL P + + E A + + L LGI+ + + IR +P L ++N Sbjct: 479 QSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQQN 537 Query: 509 IPQLLRDIIDEIIDS 523 + L+ ++I + Sbjct: 538 LQILIPELIGYLAQQ 552 >gi|300721486|ref|YP_003710761.1| methyl-directed mismatch repair protein [Xenorhabdus nematophila ATCC 19061] gi|297627978|emb|CBJ88527.1| enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA [Xenorhabdus nematophila ATCC 19061] Length = 640 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 165/629 (26%), Positives = 278/629 (44%), Gaps = 70/629 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MAIKILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +++ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SRP Sbjct: 61 CGISQQDLTLALARHATSKIASLDDLEAIMSMGFRGEALASISSVSRLTLTSRPENQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +P A GT VEV DLF+ PAR FL++E+ E I +V+RR+A+ Sbjct: 121 WQSYAEGRDMEITVKPAAHPVGTTVEVLDLFYNTPARRKFLRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A ++ + + + R++ + G F+ A+ L+ + + + ++G+ Sbjct: 181 ARLDIAINLNHNGKLVRQYRPAKEESQYERRLAAICGTAFVQQALALSWQHDALLIKGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P ++ Y ++NGR ++D+ I IR AY + I + P VL LEIDP QVDV Sbjct: 241 ADPMSTTTGSDIQYCYVNGRMMRDRLINHAIRQAYQDLIQGEQQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL-SKKMISSFHQDNAP----- 351 NVHPAK +RF ++ +FI Q + + ++ L ++ + +N P Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQGVAAVLKQRSKGDELALGCQEPTEHWVPENRPSAGEN 360 Query: 352 -----------------------KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + P L L E+ L Sbjct: 361 HFLRKKIVPADSVSARHHDNDNIRQREPDKRQPLGREAPPLHHGESYQKKQGDLYQKLMQ 420 Query: 389 YSEDNDPV----------------------EESEATHYQLGIACAQIHQNYIISQTTDGL 426 ++ + S H+ G + Y + +++ G+ Sbjct: 421 FAPEEKQPLFPERAASASSSSVQSSLEKNSNASSGYHHSFGKILSIYAGCYALLESSIGI 480 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 ++ A L ++ + SQ LL P + L + E + ++ E L GI+ Sbjct: 481 GLLSLPVAERWLKQAQL--TPGEQGLKSQPLLIPLKLALNQAEMGSLKQNSELLKTFGIE 538 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY-GS 545 + I + L ++N+P+LL +++ + + S E I ++ + GS Sbjct: 539 -STSANGKVTIHAVSLPLRQQNLPKLLPELLGYLGEQSVVSA-----EQIAIWLSRHLGS 592 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 + +LL ++E+ C Sbjct: 593 --EHETWNVAQAVQLLADVERL-----CP 614 >gi|68248618|ref|YP_247730.1| DNA mismatch repair protein [Haemophilus influenzae 86-028NP] gi|81336955|sp|Q4QPH7|MUTL_HAEI8 RecName: Full=DNA mismatch repair protein mutL gi|68056817|gb|AAX87070.1| DNA mismatch repair protein MutL [Haemophilus influenzae 86-028NP] Length = 629 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 155/570 (27%), Positives = 268/570 (47%), Gaps = 57/570 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ ++ K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIIRQYRPAEAINQQLKRVAAICGDDFVKNALRIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + S + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISYALNNQEQLNWHTDQSAVENHEENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN---------------------------------- 379 P A + N+ + ++ + + Sbjct: 361 IRPNRAAAGQNSFAPKYYEKPQQNQPHFSNTPVLPNHVSTGYRDYRSDAPSKTEQRLYAE 420 Query: 380 -----------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D+ + S+ + + I ++ Q + Sbjct: 421 LLRTLPPTAQKDISDTAQQNISDTAKIISTEIIECSSHLRTLSLIENRALLLQQNQDFFL 480 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK-A 487 + E+L + + +I Q LL P + L E + ++ ++ ++G + Sbjct: 481 LSL----EKLQRLQWQLALQQIQIEQQPLLIPIVFRLTEAQFQAWQQYSDNFKKIGFEFI 536 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDII 517 E + + ++P +L +N+ + L ++ Sbjct: 537 ENQAQLRLTLNKVPNVLRTQNLQKCLMAML 566 >gi|260582015|ref|ZP_05849810.1| DNA mismatch repair protein [Haemophilus influenzae NT127] gi|260094905|gb|EEW78798.1| DNA mismatch repair protein [Haemophilus influenzae NT127] Length = 633 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 164/624 (26%), Positives = 280/624 (44%), Gaps = 74/624 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKITDLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + S +R++ + G+DF+ NA+ ++ K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIIRQYRPASDLNQQLKRVAAICGDDFVKNALRIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + S + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISHALNNQEQINWHTEQSAVENHEENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN---------------------------------- 379 P A + N+ + ++ + + Sbjct: 361 IRPNRAAAGQNSFAPKYHEKPQQNQPHFFDGRGLSSHVTADYRDYRENYKKDTPSKTEQQ 420 Query: 380 ---------------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 D+ + S+ + + I ++ Q Sbjct: 421 LYGELLRTLPPTEQKDISNTAQQNISDTAKIIPTEIIECSSHLRTLSLIENRVLLLQQNQ 480 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 G ++ E+L + + I Q LL P + L E + ++ +D ++G Sbjct: 481 GFFLLSL----EKLQRLQWQLALQQIHIEQQPLLIPIVFRLTESQFQKWQQYSDDFKKIG 536 Query: 485 IK-AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY 543 + E + + +P+IL +N+ + + ++ + + A + C Sbjct: 537 FEFIENQAQLRLTLNRVPSILRTQNLQKCVMTMLT------KNENSSPFLTALCAQLECK 590 Query: 544 GSIRSG---RKMQ-SIEMNRLLRE 563 + E RLL + Sbjct: 591 T---FNALADALNLLSETERLLTQ 611 >gi|145633371|ref|ZP_01789101.1| DNA mismatch repair protein [Haemophilus influenzae 3655] gi|145635252|ref|ZP_01790956.1| DNA mismatch repair protein [Haemophilus influenzae PittAA] gi|144985934|gb|EDJ92536.1| DNA mismatch repair protein [Haemophilus influenzae 3655] gi|145267531|gb|EDK07531.1| DNA mismatch repair protein [Haemophilus influenzae PittAA] Length = 629 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 156/570 (27%), Positives = 270/570 (47%), Gaps = 57/570 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+D D I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ ++ K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIIRQYRPAEAINQQLKRVAAICGDDFVKNALRIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + S + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISYALNNQEQLNWHTDQSAVENHEENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN---------------------------------- 379 P A + N+ + ++ + + Sbjct: 361 IRPNRAAAGQNSFAPQYHEKPQQNQPHFSNTPVLPNHVSTGYRDYRSDAPSKTEQRLYAE 420 Query: 380 -----------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D+ + S+ + A + I ++ Q + Sbjct: 421 LLRTLPPTEQRDISNTAQQNISDTAKIISTEIIECSSHLRALSLIENRALLLQQNQDFFL 480 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK-A 487 + E+L + + +I Q LL P + L E + ++ +D ++G + Sbjct: 481 LSL----EKLQRLQWQLALKQIQIEQQPLLIPIVFRLTEAQFQAWQQYSDDFKKIGFEFI 536 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDII 517 E + + ++P++L +N+ + + ++ Sbjct: 537 ENQAQLRLTLNKVPSVLRTQNLQKCVMAML 566 >gi|288574976|ref|ZP_06393333.1| DNA mismatch repair protein MutL [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570717|gb|EFC92274.1| DNA mismatch repair protein MutL [Dethiosulfovibrio peptidovorans DSM 11002] Length = 585 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 173/608 (28%), Positives = 280/608 (46%), Gaps = 38/608 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I +L + + +IAAGE++ERP +KEL+ENSLDA SSR+ + GG+ + D+G Sbjct: 1 MTIHRLPQTVAMRIAAGEVVERPISVVKELMENSLDAGSSRISVSVIQGGRLSIVVEDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++P+AV+RH TSKIS +D I T G+RGEAL S+ AVS L + SR Q ++G Sbjct: 61 CGIPREDLPLAVERHATSKISSIEDLEAIATLGYRGEALASVAAVSRLDIRSRTNQEDSG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + G V GT V+V DLFF +PAR FLKS + E IT V++ ++A Sbjct: 121 VWLRMEGGGPPKVDEQNCRIGTRVQVDDLFFNLPARRKFLKSARAELRRITKVVQEFSVA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIG--EDFINNAVELNEKSNEITLQGY 236 YP V+F S+ Y+ + + + + G + + ++ S + Q Sbjct: 181 YPSVAFILSSDGKKIYETQ---GGRDRVDVLKSLWGDEPEILTSSGARGPYSVTLWWQ-- 235 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 ++ + F+NGR V+D I + I + ET P G + V +E P +VD Sbjct: 236 ----RISKVSRVSVMAFVNGRRVEDGTIRAAISSG--ETHPGGNWAV---WVETPPDEVD 286 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---KGISTSSVLSKKMISSFHQDNAPKT 353 VNVHPAK+ + FR+ + + + S + + ++ APK Sbjct: 287 VNVHPAKTEVLFRHGGDLFAAVRDGATSMKGRSLPDWESRQLLRTGSPAGTYVPKYAPKG 346 Query: 354 HL-----PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 + +S + E S S P + +DPVE E H Sbjct: 347 ESLFRGVDPFPSSSGSGGETRLRSFKIPSAPAAESSPLPVREQISDPVEVDEGPHI---S 403 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 Q+ Y++ +V++D HAAHER+ FE++++ +S T + L Sbjct: 404 YLGQLDSGYLVFDDGGDMVLMDPHAAHERINFERIKKRCSS---EYGTQHLATPVHLPPT 460 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI--LSKKNIPQLLRDIIDEIIDSSTT 526 + + +E L +G G + IP + S + +LR I + +++ T Sbjct: 461 MASEVDHMEERLASVGFVFSV-GDGETLLEGIPDVPGCSSVSPVDMLRTTIAALSENTDT 519 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 + + AT+AC S++ K+ E L R++ + S C HGRP ++L Sbjct: 520 G---EIMWLKWATLACKASVKLTWKLSREEAVALWRDLTRCETPSACPHGRPAVLRLSSD 576 Query: 587 DIEKLFGR 594 + F R Sbjct: 577 KMASHFER 584 >gi|328950998|ref|YP_004368333.1| DNA mismatch repair protein mutL [Marinithermus hydrothermalis DSM 14884] gi|328451322|gb|AEB12223.1| DNA mismatch repair protein mutL [Marinithermus hydrothermalis DSM 14884] Length = 544 Score = 405 bits (1041), Expect = e-110, Method: Composition-based stats. Identities = 161/593 (27%), Positives = 264/593 (44%), Gaps = 66/593 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L +++ +IAAGE++ P +KEL+EN+LDA ++R+E + GG +TDNG G Sbjct: 2 IRRLPPELVREIAAGEVVTAPVDVVKELVENALDAGATRIEVELWAGGIEKIVVTDNGAG 61 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + E+P+A++RH TSK+ +D S I T GFRGE L +I A + L L SRP GA + Sbjct: 62 IPKAELPLALERHATSKL-EDLSRIRTLGFRGEGLFAIRASARLRLTSRPADQLGGATVE 120 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 GE ++ V PGT VEV LF +PAR L+S E I + R+ + P + Sbjct: 121 AEGEAVTLVEH-PAPPGTRVEVTRLFAHLPARRAALESPAAEGKKIVAYLTRVLLHRPYL 179 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 + ++ G E + G N + + + L+G P Sbjct: 180 RLRLAMDGEEKWVF----AGGEALEAARFIWGPVTANRLLPVRMVQEGLRLEGLISRPEL 235 Query: 243 NRGNANQFYVFINGRTV-QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 R ++ ++ +NGR V + +L + AY E +P G+YPV VL LE+ P V VN P Sbjct: 236 VRPRRDRLHLAVNGRPVEWPEGLLRAVVRAYRELLPAGQYPVGVLNLELPPEAVLVNTTP 295 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 AK +R P + F+ +++ + + ++ + + Sbjct: 296 AKDRVRLLEPERVAEFVERAVSETLAAHPLARPLPELRPV-------------------- 335 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 + V + + + Y+I++ Sbjct: 336 --------------------------------EGVRPARGHRFPRLRYLGRFRDLYLIAE 363 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 D L +VDQHAAHER++FE++ + + L PE++ L E A E +L Sbjct: 364 AEDELWVVDQHAAHERILFEELCRRYREEPP--VELAHPELVPLTPEEEARYAERSAELT 421 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 R G+ E FG +R +PA L+ P+L+ +++ + + +L +A Sbjct: 422 RAGLVLEPFGSRRYRVRSVPAFLAAH--PELVAEVVKGAL---GPAGFEKAWRAVLGRLA 476 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C +IR+G + LL ++ C HGRPT + L ++ + FGR Sbjct: 477 CLPAIRAGHPLAQASAQALLDQLAACETPWVCPHGRPTALVLSELELARRFGR 529 >gi|315634031|ref|ZP_07889320.1| DNA mismatch repair protein MutL [Aggregatibacter segnis ATCC 33393] gi|315477281|gb|EFU68024.1| DNA mismatch repair protein MutL [Aggregatibacter segnis ATCC 33393] Length = 616 Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats. Identities = 169/579 (29%), Positives = 282/579 (48%), Gaps = 48/579 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LS ++ NQIAAGE++ERP+ +KEL+ENSLDA + +++ I GG S +I DNG Sbjct: 1 MTIRILSPQLANQIAAGEVVERPASVVKELVENSLDAGADKIQIDIENGGASLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+D D I + GFRGEAL SI +VS LTL SR + N Sbjct: 61 IGIAKEELALALARHATSKIADLADLEAILSLGFRGEALASISSVSRLTLTSRTAEQNEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL+SE+ E + I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIQPASHPVGTTVEVANLFFNTPARRKFLRSEKTEFSHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A ++FT + + TN +R++ + G+DFI NA++++ K +++ L G+ Sbjct: 181 AKFNINFTLTHNGKVLRQYKSAVTNEQKLKRVAAICGDDFIQNALQIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P F+R + Y ++NGR V+DK I IR AYA+ + +YP VL ++++P +DV Sbjct: 241 AMPHFHRPQNDLNYCYVNGRMVRDKIITHAIRQAYADYLTNEQYPAFVLFIDLNPNDIDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS--TSSVLSKKMISSFHQDNAPKTHL 355 NVHP K +RF+ ++ +FI Q I A+ + I T + + + +T Sbjct: 301 NVHPTKHEVRFQQSRLVHDFITQGISNALASEPIPLNTPPTECGVEEPAGVWEVSTQTKP 360 Query: 356 PKYAT------------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSED----------- 392 + A S E + ++ + N + E Sbjct: 361 NRSAAGQNIFAQPTTVYSANAYSENRYHEQPKQQKNPPHFYGGSSPREPITPKVLEAHNA 420 Query: 393 ---------NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 V E + + A A I ++ Q ++ + + Sbjct: 421 LWTSSEKLVQSNVTEVKKPNTNFLHALALIQHEALLLQQEQRFYLLSLARLQQLKQTLNL 480 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-ERFGPNAIAIREIPA 502 SQ LL P I L + + ++ ++G E + I ++++ A Sbjct: 481 TLLPT-----SQPLLIPIIFRLSDAQWQAWLQQKTYFEQVGFVFMEEAAQHKITLQKVSA 535 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 L ++N+ ++ ++D+ ++ L + + +LA +A Sbjct: 536 HLRQQNLQHMIVSLLDQSFEN-----LPEFLTALLAPLA 569 >gi|329123087|ref|ZP_08251657.1| DNA mismatch repair protein MutL [Haemophilus aegyptius ATCC 11116] gi|327471642|gb|EGF17084.1| DNA mismatch repair protein MutL [Haemophilus aegyptius ATCC 11116] Length = 629 Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats. Identities = 156/570 (27%), Positives = 270/570 (47%), Gaps = 57/570 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ + K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIIRQYRPAEAINQQLKRVAAICGDDFVKNALRIEWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDVYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + S + + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISHALNNQEQLNWHTDQSAVENREENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN---------------------------------- 379 P A + N+ + ++++ + Sbjct: 361 IRPNRAAAGQNSFAPKYHEKSQQNQPHFSNTPVFPNHVSTGYRDYRSDAPSKTEQRLYAE 420 Query: 380 -----------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D+ + S+ + A + I ++ Q + Sbjct: 421 LLRTLPPTEQRDISNTAQQNISDTAKIISTEIIECSSHLRALSLIENRALLLQQNQDFFL 480 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK-A 487 + E+L + + +I Q LL P + L E + ++ +D ++G + Sbjct: 481 LSL----EKLQRLQWQLALKQIQIEQQPLLIPIVFRLTESQFQAWQQYSDDFKKIGFEFI 536 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDII 517 E + + +P++L +N+ + + ++ Sbjct: 537 ENQAQLRLTLNRVPSLLRTQNLQKCVMAML 566 >gi|256852231|ref|ZP_05557617.1| DNA mismatch repair protein mutL [Lactobacillus jensenii 27-2-CHN] gi|260661737|ref|ZP_05862648.1| DNA mismatch repair protein mutL [Lactobacillus jensenii 115-3-CHN] gi|282932641|ref|ZP_06338055.1| DNA mismatch repair protein MutL [Lactobacillus jensenii 208-1] gi|297205603|ref|ZP_06922999.1| DNA mismatch repair protein HexB [Lactobacillus jensenii JV-V16] gi|256615277|gb|EEU20468.1| DNA mismatch repair protein mutL [Lactobacillus jensenii 27-2-CHN] gi|260547484|gb|EEX23463.1| DNA mismatch repair protein mutL [Lactobacillus jensenii 115-3-CHN] gi|281303215|gb|EFA95403.1| DNA mismatch repair protein MutL [Lactobacillus jensenii 208-1] gi|297150181|gb|EFH30478.1| DNA mismatch repair protein HexB [Lactobacillus jensenii JV-V16] Length = 622 Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats. Identities = 170/631 (26%), Positives = 289/631 (45%), Gaps = 53/631 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+EN++DA++S++E G + DNG Sbjct: 3 KIHELSETLTNQIAAGEVIERPASVVKELVENAIDAKASQIEIEFIDAGLKEVIVRDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ SE++ +A +RH TSKIS D I T GFRGEAL SI AVSH +++ G Sbjct: 63 GIASEDLDLAFRRHATSKISKERDLFKIATLGFRGEALASIVAVSHTEVITST-DGIKGV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + +G + S A GT ++V DLF+ PARL +LKS + ET I D++ R+A+ + Sbjct: 122 KAEFAGGEKLSEETHASTKGTEIKVSDLFYNTPARLKYLKSPRTETMKIVDIVNRLALGH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 +V+FT + N N + ++ + G + +E +++ + + G Sbjct: 182 SEVAFTLKNEGKL---LLKTPGNNNLRQDLANIYGRFIAKDMIEFSKEDPDFKVSGLLST 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + +NGR +++ + I Y I GRYP+ V+L+E+DP VDVNV Sbjct: 239 PETTRSNRNFVSILLNGRYIKNYQLTKAILAGYGSKIAQGRYPIAVILIELDPFLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I + I A+ + S++ + A + Sbjct: 299 HPTKEQVRLSKEKELSRLITEGISTALLENTSQVSALANLNKEVDRQDQLAFNLNKNVVD 358 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV----------------------- 396 T+ T +EK +E +++ + D ED+ V Sbjct: 359 TTRTY-EEKPAKEEKQIADQEANYVDLNQVREDDRYVLTASWDKNVAIQVSLTPFTSKDT 417 Query: 397 -----------EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 +E A C Q+ YI++ D L ++DQ +A L + + Sbjct: 418 DSSEDSLLTKGDEKIAYSLPYLTYCGQVGA-YILASNEDDLYLIDQVSAQRALKYRDTLK 476 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 TLLTP ++D + I H +L LG+ E FG N++ + P L Sbjct: 477 QMQEKDYQQ-TLLTPLVLDFGSEDYLEIKNHLSELKELGLILEDFGQNSLLLPSYPLWLK 535 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMAC---YGSIRSGRKMQSIEMNRLLR 562 ++ +R+++D + + +D + +I +++A +R K+ LL Sbjct: 536 DESERN-IRELLDLFL-----TSKKDNLTSIKSSLAKAEVRRQVRK-EKLTKEGAQNLLE 588 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 ++ + G+ +K+ ++++ +F Sbjct: 589 QLASLADPYHDPFGQLIIVKITDTELDHMFK 619 >gi|145636727|ref|ZP_01792393.1| DNA mismatch repair protein [Haemophilus influenzae PittHH] gi|145270025|gb|EDK09962.1| DNA mismatch repair protein [Haemophilus influenzae PittHH] Length = 629 Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats. Identities = 155/570 (27%), Positives = 271/570 (47%), Gaps = 57/570 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+D D I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKITDLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E + I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFSHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ ++ K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIIRQYRPAFDLNQQLKRVAAICGDDFVKNALRIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPADAYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + + + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISHALNNQEQINWHTDQNAVENHEENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN---------------------------------- 379 P A + N+ + ++ + + Sbjct: 361 IRPNRAAAGQNSFAPKYYEKPQQNQPHFSNTPVLPNHVSTGYRNYRSDAPSKTEQRLYAE 420 Query: 380 -----------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D+ + S+ + A + I ++ Q + Sbjct: 421 LLRTLPPTVQKDISNTAQQNISDTAKIISTEIIECSSHLRALSLIENRALLLQQNQDFFL 480 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK-A 487 + E+L + + +I Q LL P + L E + ++ +D ++G + Sbjct: 481 LSL----EKLQRLQWQLALKQIQIEQQPLLIPIVFRLTEAQFQAWQQYSDDFKKIGFEFI 536 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDII 517 E + + ++P++L +N+ + + ++ Sbjct: 537 ENQAQLRLTLNKVPSVLRTQNLQKCVMAML 566 >gi|16272041|ref|NP_438240.1| DNA mismatch repair protein [Haemophilus influenzae Rd KW20] gi|260580629|ref|ZP_05848456.1| mismatch repair protein mutL [Haemophilus influenzae RdAW] gi|1171080|sp|P44494|MUTL_HAEIN RecName: Full=DNA mismatch repair protein mutL gi|1573016|gb|AAC21745.1| DNA mismatch repair protein (mutL) [Haemophilus influenzae Rd KW20] gi|260092691|gb|EEW76627.1| mismatch repair protein mutL [Haemophilus influenzae RdAW] Length = 629 Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats. Identities = 165/620 (26%), Positives = 284/620 (45%), Gaps = 70/620 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E + I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFSHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ + K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIIRQYRPAEAINQQLKRVAAICGDDFVKNALRIEWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + S + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISHALNNQEQINWHTDQSAVENHEENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN---------------------------------- 379 P AT+ N+ + ++ + + Sbjct: 361 IRPNRATAGQNSFAPQYHEKPQQNQPHFSNTPMFPNHVSTGYRDYRSDAPSKTEQRLYAE 420 Query: 380 -----------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D+ + S+ + A + I ++ Q + Sbjct: 421 LLRTLPPTAQKDISDTAQQNISDTAKIISTEIIECSSHLRALSLIENRALLLQQNQDFFL 480 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK-A 487 + E+L + + +I Q LL P + L E + ++ +D ++G + Sbjct: 481 LSL----EKLQRLQWQLALKQIQIEQQALLIPIVFRLTESQFQAWQQYSDDFKKIGFEFI 536 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR 547 E + + ++P+ L +N+ + + ++ +SS + + A + C Sbjct: 537 ENQAQLRLTLNKVPSALRTQNLQKCVMAMLTRDENSS------SFLTALCAQLECKT--- 587 Query: 548 SG---RKMQ-SIEMNRLLRE 563 + E RLL + Sbjct: 588 FNALADALNLLSETERLLTQ 607 >gi|300115281|ref|YP_003761856.1| DNA mismatch repair protein Mutl [Nitrosococcus watsonii C-113] gi|299541218|gb|ADJ29535.1| DNA mismatch repair protein MutL [Nitrosococcus watsonii C-113] Length = 584 Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats. Identities = 170/597 (28%), Positives = 281/597 (47%), Gaps = 29/597 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L + NQIAAGE++ERP+ +KEL+EN+LDA + R+E GG ++ D+G Sbjct: 8 RIQILPPALANQIAAGEVVERPASVLKELVENALDAGAQRIEIEAEVGGIGLIRVRDDGC 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++PMA+ H TSKI ++ NI T GFRGEAL SIGAVS L+L SR + G Sbjct: 68 GIHHDDLPMALSPHATSKIHHEEELLNITTLGFRGEALASIGAVSRLSLCSRIADSEHGW 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + + +P+A GT VE RDLF+ PAR FL+ E+ E + + ++A+++ Sbjct: 128 CVR----ENTPAQPIAHPVGTTVEARDLFYNTPARRRFLRGEKTEFIRLRTIQTQLALSH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++SF S + + + +RI+++ G F +++ ++ + L G+ G Sbjct: 184 FEISFRISYNRRPFLTLPACARPLEQLKRITELCGRTFTEHSMYFKRETEGLCLWGWLGH 243 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F R + Y ++N R V+DK + R AY + +P GR+P +L LE+ Q+DVN Sbjct: 244 PEFARSQTDLQYCYVNHRMVRDKLLRHAARQAYGDRLPQGRHPSYLLYLELPTHQIDVNA 303 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RFR + FI++++ + + + L D K K Sbjct: 304 HPTKHEVRFRESRRVHGFIVRTLAEILERTEPEEEHRLVSGEFQPQLHDMGNKGQADKTY 363 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + E + P +E +LG A + Y++ Sbjct: 364 PIVAEPSEN---------------YSPLKLEKRTSPSKERNEVPSRLGQVQALVLGRYLL 408 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ GLV+VD A L +R + + I Q LL P L + A +H + Sbjct: 409 AENKQGLVLVDLPVARAHLAQAYLRTAYTTGHIIRQPLLLPLTFQLSLQQAAWTEQHAPE 468 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR-IENILA 538 L LG+ + GP + +REIPA + + ++ LL + +I + ++ Sbjct: 469 LRELGLGLHQLGPQTVILREIPAAIQELDLKGLLLALFAQITRQQHIMPANKTPLRELIV 528 Query: 539 TM-ACYGSIRSGRKMQSIEMNRLLREMEKNPN--SSQCNHGRPTFIKLKLSDIEKLF 592 + A Y + R EMN LL+E+E P + +L +IE+ F Sbjct: 529 DLTARYPASTVSRP-SLQEMNALLQELENLYQTAPRLDPS--P-WRELSKHEIEQWF 581 >gi|253991555|ref|YP_003042911.1| DNA mismatch repair protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638433|emb|CAR67055.1| dna mismatch repair protein mutl [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253783005|emb|CAQ86170.1| dna mismatch repair protein mutl [Photorhabdus asymbiotica] Length = 633 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 166/577 (28%), Positives = 270/577 (46%), Gaps = 50/577 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA +SR++ I GG ++ DNG Sbjct: 1 MAIKILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIEIERGGVKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++I +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + N Sbjct: 61 CGINHQDIALALARHATSKIATLDDLEAIISMGFRGEALASISSVSRLTLTSRTEEQNEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A G+ VEV DLF+ PAR FL++E+ E I +VIRR+A+ Sbjct: 121 WQAYAEGRDMEVTVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A VS + R++ + G F+ A+ L+ + +++++G+ Sbjct: 181 ARLDVSINLHHNGKLVRQYRPAKDESQHERRLASICGTAFMQQALSLSWQHGDLSIKGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++NGR ++D+ I IR AY + I + P VL LE+DP QVDV Sbjct: 241 ADPMNATASGDIQYCYVNGRMMRDRLINHAIRQAYQDLIQGEQQPSYVLYLEVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV-LSKKMISSFHQDNAPK---- 352 NVHPAK +RF ++ +FI Q + + ++G ST + + +N P Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQGVTAVLKQRGSSTELDMACCEPAPVWEPENRPSAGEN 360 Query: 353 ------------THLPKYATSLTNTQEKLFLQEN-RLSTNDLLPSDDPTYSEDNDPVEES 399 T LPK +S+ ++ EN + + Y + V E Sbjct: 361 HFSRQNSAASVATSLPKEVSSVRSSSVSSRSGENYQYHGGNYQKRQGELYQKMMQSVPEP 420 Query: 400 E--------------------------ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 E + G + Y + + G+ ++ Sbjct: 421 EGKRELFPTRTAPVTAEKITSIPVQVKNNSHSFGKVLSIYPPCYALIEFPLGIGLLSLPV 480 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 A ++++ + SQ LL P + L + E + + + L GI+A F Sbjct: 481 AERW--LKQVQLTPTEQGLKSQPLLIPLKLSLSKEEADALNRYSDLLGSFGIEASVFHGK 538 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 A +R + L ++N+P+L+ ++ + + Q Sbjct: 539 A-TLRAVSLPLRQQNLPKLISQLLGYLAQQPSASVEQ 574 >gi|255536606|ref|YP_003096977.1| DNA mismatch repair protein MutL [Flavobacteriaceae bacterium 3519-10] gi|255342802|gb|ACU08915.1| DNA mismatch repair protein MutL [Flavobacteriaceae bacterium 3519-10] Length = 592 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 143/592 (24%), Positives = 259/592 (43%), Gaps = 12/592 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KEL+EN++DA +++VE +I GK+ Q+ DNG G Sbjct: 11 IKLLPDHVANQIAAGEVVQRPASIVKELMENAIDAHATKVELIIRDAGKNLIQVVDNGSG 70 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + +A +RH TSKI ++D I T GFRGEAL SI AV+ + L ++ TG Sbjct: 71 MSDTDARLAFERHATSKINCTEDIFRISTKGFRGEALASIAAVAQVELRTKTKDAVTGTN 130 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G P+ G+ V++LF+ +PAR FLK+ VE I D +R+A+A+ Sbjct: 131 IYIEGGGFQFQEPIQTAEGSNFLVKNLFYNVPARRKFLKNNNVEFRHIIDEFQRVALAHE 190 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V F +++ +RI +V G + + E + L G+ P Sbjct: 191 NVDFELFHNDDIIFRLR----KSGLLQRIVEVFGRKLHPLLIPIKEDLGWVKLSGFVAKP 246 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + + F+NGR + + ++ A+ + G P L LE+DP +VDVN+H Sbjct: 247 EGAKKVRGEQFFFVNGRYFKSPYFNKAVQEAFEGLLLPGYIPTFFLFLELDPEKVDVNIH 306 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ ++F + +I + +I+K++ ++ S K + ++ Sbjct: 307 PQKTEVKFEDENLIFALVRSTIKKSLGIYNVAPSLDFEKDVTMDAFVHQKNGGNVYHAPD 366 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 + FL+E + + ++ S P + + ++ Y + Sbjct: 367 VTVDRDYNPFLEERASAGDHAAMTEIYQQSASAKPSKINLFEEEDFDEDLMRLPNGYWLF 426 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 +++D H ++ E+ + TLL + E E + L Sbjct: 427 NRNGKTLMLDLGRMHRLIVSER--NAKKKKNVEQHTLLFSLEYHMNETEKNKFRSIKKYL 484 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 LG + N + I +P L + + + + + D I++ T + N + Sbjct: 485 PSLGFEMVIANDNVLRIDAVPEGLKESQVMKFMEQLFD-ILEYRTEDEFLNFYNNQWVKI 543 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 R + + L+++ G+ FI+L L D++ F Sbjct: 544 QSRS--RF-DFLYKTDAEHLIKDFTALGFPEYLPSGKRCFIELPLEDLKNKF 592 >gi|257066442|ref|YP_003152698.1| DNA mismatch repair protein MutL [Anaerococcus prevotii DSM 20548] gi|256798322|gb|ACV28977.1| DNA mismatch repair protein MutL [Anaerococcus prevotii DSM 20548] Length = 611 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 182/620 (29%), Positives = 297/620 (47%), Gaps = 35/620 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I KL +K I +IAAGE+IE P +KEL+ENS+DA + R+ I GGK++ ++TDNG Sbjct: 1 MTILKLDDKTIEKIAAGEVIESPVSIVKELVENSIDAGADRITVEIKNGGKTYIRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+++EEI +A +H TSKI D D +I++ GFRGEAL SI +VS +T +S+ G Sbjct: 61 SGISNEEIELAFSKHATSKIRDFNDLYDIYSLGFRGEALASIVSVSEVTAISKTKDELVG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++I + + N GT + V DLF IP R FLKS+ VE+N I+ ++ +AI Sbjct: 121 SKINFNNGDKTLTSIA-TNVGTSIIVEDLFRDIPVRRRFLKSDIVESNHISKLMYAIAIG 179 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 YP++SF F ++ + N RI++++ + ++ +++++ ++ ++G+ Sbjct: 180 YPEISFKFIKNENIEFSTI---KNEALKMRIAKLLDDKLEDHLIKISDNNDIYQIEGFIS 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + RGN + Y++IN R V+ + I I AY IP GR+PV L ++ +P+ +DVN Sbjct: 237 NNNYYRGNRSLQYIYINNRLVESELIRDRIEMAYRGNIPNGRFPVFFLYIKTNPKNIDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K I+F + N I SI + IN + + + + L Y Sbjct: 297 VHPNKRVIKFSYEDQLINLIDSSISRYINASNGVKEVSIEENNKNDLMDFSDYSQILNNY 356 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN------------------------D 394 S + +E F ND + + + N + Sbjct: 357 NNSKSLVRESSFDNLYESENNDSNKEEAKDFFDSNIDISFKEKSNYEECLENNNTGLEEE 416 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 E S ++ I Y I + D L I+D A E++ F + F + + Sbjct: 417 IEENSYIKDFEYLNYKCSIFARYSIFERKDKLFILDHRRASEKINFSRFLNQFENKTMDE 476 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL P II+L + + +E + ++RLG AE G +I IR +P I S + Sbjct: 477 QILLNPLIINLNKFDIDRFIEKKDVINRLGFDAEIIGDRSIIIRSVPFIFSVPEDDKFFY 536 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 D++D T Y + + L+ R G K+ E L+ +++ N Sbjct: 537 DLLDLDYSKDTDYLYKKLKKLNLSLS-----FRKGDKINEAEAYELIGNIKELDNPYTTY 591 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 G+ I++ D+EK F R Sbjct: 592 DGKAVLIEINEKDVEKYFER 611 >gi|229846987|ref|ZP_04467093.1| DNA mismatch repair protein [Haemophilus influenzae 7P49H1] gi|229810071|gb|EEP45791.1| DNA mismatch repair protein [Haemophilus influenzae 7P49H1] Length = 629 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 157/570 (27%), Positives = 269/570 (47%), Gaps = 57/570 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIRILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ ++ K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIVRQYRPAFDLNQQLKRVAVICGDDFVKNALRIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + S + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISHALNNQEQLNWHTEQSAVENHEENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN---------------------------------- 379 P A + N+ + ++ + + Sbjct: 361 IRPNRAAAGQNSFAPQYHEKPQQNQPHFSNTPVFPNHVSTGYRDYRSDAPSKTEQRLYAE 420 Query: 380 -----------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D+ + S+ + A + I ++ Q + Sbjct: 421 LLRTLPPTAQKDISNTAQQNISDTAKIISTEIIECSSHLRALSLIENRALLLQQNQDFFL 480 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK-A 487 + E+L + + +I Q LL P + L E + ++ +D ++G + Sbjct: 481 LSL----EKLQRLRWQLALKQIQIEQQPLLIPIVFRLTESQFQAWQQYSDDFKKIGFEFI 536 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDII 517 E + + ++P +L +N+ + + ++ Sbjct: 537 ENQAQLRLTLNKVPNVLRTQNLQKCVMAML 566 >gi|148825652|ref|YP_001290405.1| DNA mismatch repair protein [Haemophilus influenzae PittEE] gi|166232090|sp|A5UB71|MUTL_HAEIE RecName: Full=DNA mismatch repair protein mutL gi|148715812|gb|ABQ98022.1| DNA mismatch repair protein [Haemophilus influenzae PittEE] Length = 629 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 156/570 (27%), Positives = 269/570 (47%), Gaps = 57/570 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIRILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ ++ K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIVRQYRPAFDLNQQLKRVAVICGDDFVKNALRIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + S + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISYALNNQEQLNWHTEQSAVENHEENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN---------------------------------- 379 P A + N+ + ++ + + Sbjct: 361 IRPNRAAAGQNSFAPQYHEKPQQNQPHFSNTPVLPNHVSTGYRDYRSDAPSKTEQRLYAE 420 Query: 380 -----------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 D+ + S+ + A + I ++ Q + Sbjct: 421 LLRTLPPTAQKDISNTAQQNISDTAKIISTEIIECSSHLRALSLIENRALLLQQNQDFFL 480 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK-A 487 + E+L + + +I Q LL P + L E + ++ ++ ++G + Sbjct: 481 LSL----EKLQRLQWQLALQQIQIEQQPLLIPIVFRLTEAQFQAWQQYSDNFKKIGFEFI 536 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDII 517 E + + ++P +L +N+ + + ++ Sbjct: 537 ENQAQLRLTLNKVPNVLRTQNLQKCVMAML 566 >gi|145642149|ref|ZP_01797718.1| DNA mismatch repair protein [Haemophilus influenzae R3021] gi|145273140|gb|EDK13017.1| DNA mismatch repair protein [Haemophilus influenzae 22.4-21] Length = 633 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 164/628 (26%), Positives = 283/628 (45%), Gaps = 74/628 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 CGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEAQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E + I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFSHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ ++ K +++ L G+ Sbjct: 181 TKFSTAFTLTHNGKIIRQYRPAEALNQQLKRVAAICGDDFVKNALRIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVINHAIRQAYAQYLPSDAYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + S + + + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISYALNNQEQLNWHTDQSAVENHEEKTVREPQPHYS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTN---------------------------------- 379 P A + N+ + ++ + + Sbjct: 361 IRPNRAAAGQNSFAPQYYEKPQQNPPHFFDGRGLSSHVTADYGDYRENYKKDTPSKTEQQ 420 Query: 380 ---------------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 D+ + S+ + A + I ++ Q Sbjct: 421 LYGELLRTLPPTEQKDISNTAQQNISDTAKIIPTEIIECSSHLRALSLIENRVLLLQQNQ 480 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 ++ E+L + + I Q LL P + L E + ++ +D ++G Sbjct: 481 DFFLLSL----EKLQRLQWKLALQQMHIEQQPLLIPIVFRLTESQFQKWQQYSDDFKKIG 536 Query: 485 IK-AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY 543 + E + + +P++L +N+ + + ++ +SS + + A + C Sbjct: 537 FEFIENQAQLRLTLNRVPSLLRTQNLQKCVMAMLTRDENSS------PFLTALYAQLECK 590 Query: 544 GSIRSG---RKMQ-SIEMNRLLREMEKN 567 + E RLL ++ + Sbjct: 591 T---FNALADALNLLSETERLLTQINRT 615 >gi|325846706|ref|ZP_08169621.1| DNA mismatch repair protein, C-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481464|gb|EGC84505.1| DNA mismatch repair protein, C-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 601 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 165/609 (27%), Positives = 296/609 (48%), Gaps = 24/609 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI +L EK I QIAAGE+IE P IKEL+ENS+DA++ + I GGKS+ ++TD+G Sbjct: 2 MKIIELDEKTIEQIAAGEVIESPVSIIKELVENSIDADAKNIIVEIKNGGKSYIRVTDDG 61 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++ A +RH TSKI D D I + GFRGEAL SI + + + +S+ G Sbjct: 62 IGIEEDDFKRAFKRHATSKIKDFSDLYRIFSLGFRGEALSSIISCADVKAVSKTSNQEIG 121 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ K+ S +A N GT +EV +LF +P R FL S+ E+N I+ +I+ +A+ Sbjct: 122 KKLEFKNGKMESKSSIATNNGTSIEVFNLFSNLPVRRKFLGSDINESNKISKIIQALALG 181 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 Y VSF F ++ N + ++I +I E+ +N +++ K++ + GY Sbjct: 182 YENVSFKFIKDNRLIFQTL---ENDSLKDKIINLIDENLKDNILKIKAKNSLYNISGYIS 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + RGN + Y+F+N R +++ I + + Y +IP RYP L ++ + +DVN Sbjct: 239 NTNYYRGNRSFQYIFVNNRLIENNNISKAVESKYKSSIPNQRYPAFFLFIKTNTNNIDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI--NKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 +HP K I+F + + ++ K + N +K +F+ D A +L Sbjct: 299 IHPNKKEIKFTYEDNLIELLEDNVSKVLYENSDFKKVKMPEDQKEELNFYDDYAEVLNLY 358 Query: 357 KYATSLTNTQEKLFLQENRLST-----------NDLLPSDDPTYSEDNDPVEESEATHYQ 405 + EK + + +S N + + S++ + + Sbjct: 359 NKVNEEKTSYEKENIDDKSISDAHDDFFEVEELNFIEKEEKKKASKELEDKRNKNFIDTK 418 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 + I Y + D ++++D A +R+ F++ ++F +I SQ LL +II + Sbjct: 419 NLLYKTSIFNRYSLFINLDKILLLDHRRADQRIKFDEFIENFKKNQINSQQLLEAKIIKV 478 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 E +E + +LG + + F + + IR +P + + +++D ID S Sbjct: 479 SLEEYNKYIEKKDVFKKLGFEIDTFSFDKLIIRSVPLVFDNPENFEFFYNLLD--IDDSN 536 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 +++I +++ + R G K+ E + ++ K+ N + G+PT I ++ Sbjct: 537 ENLFKEKISSLIN----KNTFRKGDKIDESEAYATIDKLNKSDNPYKTYDGKPTIITIEE 592 Query: 586 SDIEKLFGR 594 +++EK F R Sbjct: 593 NELEKYFDR 601 >gi|88608179|ref|YP_506489.1| MutL/HexB family DNA mismatch repair protein [Neorickettsia sennetsu str. Miyayama] gi|123750011|sp|Q2GDF7|MUTL_NEOSM RecName: Full=DNA mismatch repair protein mutL gi|88600348|gb|ABD45816.1| DNA mismatch repair protein, MutL/HexB family [Neorickettsia sennetsu str. Miyayama] Length = 652 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 178/662 (26%), Positives = 313/662 (47%), Gaps = 79/662 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI L +IIN+IAAGEI+E+P+ A+KEL+EN++DA S+ ++ + G++ ++TDNG Sbjct: 1 MKIHILPIEIINKIAAGEILEKPANAVKELVENAIDAGSTSIKVELEEVGRNLIRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++P+A+++H TSK++ D +I GFRGEAL SI S + + S Sbjct: 61 VGISREDLPLAIEKHATSKLNTKDLYDISYLGFRGEALHSIAITSEMKIASCFNGEG--- 117 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + V+P + GT+VEVR LF IP +L FL+SE+ E + I +++ R+A+ Sbjct: 118 --YVIDAQTKEVKPHHIKCGTLVEVRKLFHNIPNKLRFLRSEKTELSSIIELLNRLALVN 175 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + + + + +V+G++F+ N + + ++ I + + G+ Sbjct: 176 PNIAFELISNGRQVFDYQTATQLKRMEQL--KVLGKEFVENMIHVKHTNDGIFGELFLGL 233 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT N +F+NGR V+D I S +R AY + IP YP+ V+ + + +VDVN+ Sbjct: 234 PTLT-QKRNNCLIFVNGRPVKDSVISSVMRHAYNDYIPKNTYPIAVIFIRVHNNEVDVNI 292 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT------ 353 HP KS ++FR+P +IR F++ +++ + G STS+ ++ + + F+Q +T Sbjct: 293 HPNKSEVKFRDPQVIRRFLLSVSSRSLLQCGRSTSTTVADRAVEQFNQLLKKQTAFRKET 352 Query: 354 ----------HLPKYATSLTNTQE---------------------KLFLQENRLSTNDLL 382 PK ++ +QE ++ L Sbjct: 353 VSKTTESGFFQSPKAKKAIDQSQEYAKQFEGKRNLDFDQMQNNNGPFHFSTDQSEEALPL 412 Query: 383 PSDDPTYSEDNDPVEESEATHYQLGIA------------CAQIHQNYIISQTTDGLVIVD 430 S T + ++ + + + + H ++ ++ Sbjct: 413 MSHKKTSEDYSNKLPLEKQQSPSIFLHDNRDTSFLQQQLRKINHCEHLQNEKHFETFGKF 472 Query: 431 QHAAH----------------ERLIFEKMRQDFNSTKITSQ--TLLTPEIIDLLEGECAL 472 + H + E++ + ITS LLT E + L E + Sbjct: 473 KCQVHGTFIITETENEMIIIDQHAAHERILYEQMKKSITSPGQNLLTAEFVPLSEKAVEI 532 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + + E L +G+ ER A+ + +P +L+ DI + + TL +R Sbjct: 533 LSFNVEKLKEIGLVVERVSHCAVMVNSLPEAFKNVPTNELIEDIASLLEEEIEPKTLLER 592 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 I A +AC +I++ + E+ LL ME P++ QCNHGRPT I+L +IEKLF Sbjct: 593 IH---ANIACKRAIKANHNLTREEIEELLTLMEDIPHTGQCNHGRPTHIRLPRKEIEKLF 649 Query: 593 GR 594 R Sbjct: 650 LR 651 >gi|260558368|ref|ZP_05830564.1| DNA mismatch repair protein [Enterococcus faecium C68] gi|35367183|gb|AAN85563.1| MutL [Enterococcus faecium] gi|35367192|gb|AAN85565.1| MutL [Enterococcus faecium] gi|260075542|gb|EEW63848.1| DNA mismatch repair protein [Enterococcus faecium C68] Length = 702 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 161/699 (23%), Positives = 291/699 (41%), Gaps = 110/699 (15%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ ++ G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A +RH TSKI DD I T GFRGEALPSI +VS +TL + + G Sbjct: 63 GILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMTLETANQEEKQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G ++ RP + GT + V +LFF PARL ++K+ E I D++ R+A+++ Sbjct: 123 YLSLKGGEVIEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + KM + NG+ + I+ + G +++ K + L GY + Sbjct: 183 PSIAFRLVHDGN---KMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRFIKNFSLNKAIVAGYGSKLMVGRFPIAVLEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-----------SVLSKKMISSFHQD 348 HP K +R + I +IQKA++++ + S K Sbjct: 300 HPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQPKTEQIEIDLS 359 Query: 349 NAPKTHLPKYATSLTNTQE----------------------------KLFLQENRLSTND 380 A + PK +SL +E F +EN Sbjct: 360 YAFEEEKPKKPSSLNFDRETGTFFVEEPKNTFVDRIVDKSVENVENFSGFSEENTSYPEK 419 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI------------ 428 + D ++ VE++ + + Q + Sbjct: 420 TAKTVDKLGENVDNFVEKTVEKSEKKEFPIVDNMEKTNEEQADKSVEEDEKIYEEELTLH 479 Query: 429 --VDQHAAHERLIFEKMRQDFNSTKITSQTLLT-------PEIIDLLEGECALIMEHDED 479 D +++ + + +++ + L + +I +H Sbjct: 480 PEFDFTQGNDKTLEQAIKKLETEKPVQRFPQLEYFGQMHGTYLFAQSSDGLYIIDQHAAQ 539 Query: 480 LHRLGIKA--ERFGPNAIAIRE--IPAILSKKNIPQ--------LLRDIIDEIIDSSTTY 527 R+ + E+ G + ++E +P +L N LL D + + Sbjct: 540 -ERIKYEYFREKIGEVSDDLQELLVPIVLDYPNSDALKLKEQKHLLEDAGIYLEEFGQNS 598 Query: 528 TL-------------QDRIENIL------ATMACYG-----SIR--------SGRKMQSI 555 + + I ++ +++ +I + + Sbjct: 599 FIVRAHPTWYPNGEEESIIREMIDMLLTTGSVSVKKFREATAIMMSCKRSIKANHYLNEA 658 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL+++ + N C HGRP I SD+E++F R Sbjct: 659 QARVLLKDLARCENPFNCPHGRPVLIHFTNSDMERMFKR 697 >gi|293392159|ref|ZP_06636493.1| DNA mismatch repair protein MutL [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952693|gb|EFE02812.1| DNA mismatch repair protein MutL [Aggregatibacter actinomycetemcomitans D7S-1] Length = 616 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 167/579 (28%), Positives = 287/579 (49%), Gaps = 49/579 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LS ++ NQIAAGE++ERP+ +KEL+ENSLDA + +++ I GG +I DNG Sbjct: 1 MTIRILSPQLANQIAAGEVVERPASVVKELVENSLDAGADKIQIDIENGGAGLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+D D I + GFRGEAL SI +VS LTL SR + + Sbjct: 61 IGIAKEELALALARHATSKIADLADLEAILSLGFRGEALASISSVSRLTLTSRTAEQSEA 120 Query: 119 AQIAISGEKISS-VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + ++P + GT VEV +LFF PAR FL+SE+ E + I +VIRR+A+ Sbjct: 121 WQVYAQGRDMKTIIQPASHPVGTTVEVANLFFNTPARRKFLRSEKTEFSHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A ++FT + + T+ +R++ + GE FI NA++++ K +++ L G+ Sbjct: 181 AKFHINFTLTHNGKVLRQYKSAVTHEQKLKRVAAICGEHFIQNALQIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P FNR + Y ++NGR V+DK I IR AYA+ + +YP VL ++++P +VDV Sbjct: 241 ALPQFNRPQNDFNYCYVNGRMVRDKTITHAIRQAYADYLTTEQYPAFVLFIDLNPNEVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINK----------------------------- 328 NVHP K +RFR ++ +FI Q I A+ Sbjct: 301 NVHPTKHEVRFRQSRLVHDFITQGISNALASEQMHLNPSSMENAVEEPTGVWEAPTYTKP 360 Query: 329 ------KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLL 382 + I + + +++ + H + + +N L+ + L Sbjct: 361 NRSAAGQNIFAPTTGYSATAYAEKKNDGTQKHRQSSPHFYRENAHREQITQNVLNAHKTL 420 Query: 383 PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 + + + E + A A I+ ++ Q ++ AH + + + Sbjct: 421 WTALKNQPQTEMTIAEVSKPNTDFLHALALINDEALLLQQEQHFYLLS--LAHLQHLKLE 478 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-ERFGPNAIAIREIP 501 + TSQ LL P I L + + ++ ++G E + I ++++ Sbjct: 479 LNLTLA---PTSQPLLIPIIFRLSDAQWQAWLQQKPLFEQIGFTFTEETTQHKITLQKVS 535 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 A L ++N+ Q++ +++ I++ L + + +L ++ Sbjct: 536 AHLRQQNLQQVIISLLNHSIEN-----LPEFLTALLTSL 569 >gi|312873709|ref|ZP_07733754.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LEAF 2052A-d] gi|311090707|gb|EFQ49106.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LEAF 2052A-d] Length = 625 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 171/631 (27%), Positives = 286/631 (45%), Gaps = 50/631 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KLS ++ NQIAAGE+IERP+ IKEL EN+LDA S+R++ G + DNG Sbjct: 3 KIHKLSSELTNQIAAGEVIERPASVIKELCENALDAGSTRIKIDFIDAGLKQIVVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++EI +A RH TSKI+ D NI T GFRGEAL SI AV+ + +++ G Sbjct: 63 GIAADEIDLAFMRHATSKINTNHDLFNIATLGFRGEALASIAAVAKVDIVTNT-GGVNGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A GT + VRDLF+ PARL +LKSE+ E I D++ R+A+ Y Sbjct: 122 HAIFEDGNKVKQEAIASPQGTKIVVRDLFYNTPARLKYLKSERTEIMKIVDIVNRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + ++ + + + + + + G + + +S + + G Sbjct: 182 PQVSFELTNQQK---QLLKTTGHDDLRQTAANIYGIKVAEKMLAIYAQSPDFKIAGLISR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R N + +N R V++ ++ I Y + GRYP ++ +++DP VDVNV Sbjct: 239 ADDTRSTRNFITLLLNTRYVKNYRLVQAIVDGYGTRLLKGRYPFAIVKIDLDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISSFHQ---------- 347 HP K +R + + I+++I +A+ + I++ ++ + Q Sbjct: 299 HPTKQEVRLSKESELARLIVRTIDQALGATEHEIASFDDATESKQTKLDQLEFNLNEAVV 358 Query: 348 DNAPKTHLPKYATSLTNTQEKL------------------------FLQENRLSTNDLLP 383 D + LT+ K+ + + + T Sbjct: 359 DTSRIPVEFSIPNDLTDDSSKVKEDDTTFVSLKHPRQDEHYLVTTTWDENVQAQTALSPF 418 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S SE E+ Q+H+ Y+++ + L IVDQ AA RL F+K+ Sbjct: 419 SASQLSSEVTTSSEQILVNRLPQLQCLGQMHE-YLLATADNDLYIVDQVAADNRLAFDKL 477 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + QTLL I+D + + + D +LG+ E FG + ++E P Sbjct: 478 LLQMQAENNYEQTLLDNIILDFSMIDFLKVQDKLADFKKLGLNLEEFGGRSFVLQEYPLW 537 Query: 504 LSKKNIPQL--LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 L + Q+ + D+I I++ + + I+AT + IR + + S+EM +L Sbjct: 538 LENCDQIQIKAVIDLILAYINAPLDKIRIELAKKIVATK--H--IRR-KSLNSLEMVEML 592 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 + + N G+ K+ +D+ KLF Sbjct: 593 TSLSNSSNPYHDPFGKIIIAKISENDLRKLF 623 >gi|206577274|ref|YP_002240875.1| DNA mismatch repair protein MutL [Klebsiella pneumoniae 342] gi|290512270|ref|ZP_06551637.1| DNA mismatch repair protein mutL [Klebsiella sp. 1_1_55] gi|238058935|sp|B5Y334|MUTL_KLEP3 RecName: Full=DNA mismatch repair protein mutL gi|206566332|gb|ACI08108.1| DNA mismatch repair protein MutL [Klebsiella pneumoniae 342] gi|289775265|gb|EFD83266.1| DNA mismatch repair protein mutL [Klebsiella sp. 1_1_55] Length = 619 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 162/614 (26%), Positives = 275/614 (44%), Gaps = 61/614 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +V+ LTL SR + Sbjct: 61 SGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQQEA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q ++ +V+P A GT +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + + + +G R+ + G F+ +A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLNHNGKVIRQYRAVAQDGQRERRLGTICGAAFLEHALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPLHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHPAK +RF ++ +FI Q + + ++ + + +N Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLDAPLAEKDDPPTPRQMPENRIAAGGN 360 Query: 357 KYATS-----------------------------LTNTQEKLFLQENRLSTNDLLPSDDP 387 ++A + Q Q+ L L P Sbjct: 361 QFARPSEAREAATRFSITSSREPAASGGSSGGASWPHAQPGYQKQQGALYRQLLDTPAAP 420 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 ++ + E G + + + + L ++ A L ++ Sbjct: 421 RPAQPSAAPAELAGHSQSFGRVLTIVGGDCALLEREGSLALLSLTVAERWLRQAQL--TP 478 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + + +Q LL P + + EGE + L +LGI+ + +R +P L ++ Sbjct: 479 GTEAVCAQPLLIPLRLKVTEGEKRALAAAQSALTQLGIEL-HTDALHVTVRAVPLPLRQQ 537 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN-------RL 560 N+ L+ ++I + + + NI MA R + S + + L Sbjct: 538 NLQILIPELIGYLAQQNAFD-----VGNIAQWMA--------RNLTSEQASWNMAQAIAL 584 Query: 561 LREMEKNPNSSQCN 574 L ++E+ C Sbjct: 585 LADVERL-----CP 593 >gi|187734600|ref|YP_001876712.1| DNA mismatch repair protein MutL [Akkermansia muciniphila ATCC BAA-835] gi|238691861|sp|B2ULE2|MUTL_AKKM8 RecName: Full=DNA mismatch repair protein mutL gi|187424652|gb|ACD03931.1| DNA mismatch repair protein MutL [Akkermansia muciniphila ATCC BAA-835] Length = 633 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 174/637 (27%), Positives = 287/637 (45%), Gaps = 51/637 (8%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I +S + +Q+AAGE++ERP+ +KEL+ENSLDA + V I GG ++TD+ Sbjct: 1 MPSIHVMSPTLASQVAAGEVVERPASVVKELVENSLDAGAKFVRVEIRRGGVGMIKVTDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM+ + + +RH TSK+S ++ I GFRGEALPSI +VS L +R Q+ Sbjct: 61 GSGMSRADAELCTKRHATSKLSSLEELFEITHLGFRGEALPSIASVSRFKLCTRQQQDLE 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G +I I G R ++PGT +EV DLF+ PAR FLKS + E + + IR A+ Sbjct: 121 GWEIRIDGGLEHEPRSSGVSPGTAIEVADLFYNTPARRKFLKSAETEASHVEHQIRLHAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE-ITLQGY 236 AYP+V F + + + + + RIS + + + I++ G+ Sbjct: 181 AYPQVRFAYKRDDQLVFDLPATA---DLRVRISALTDAATAAALIPIETTIGPGISITGF 237 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 + R YVF+N R V+D+ I IR Y P G +P + L +E++P VD Sbjct: 238 LLPLSEARRTRKGQYVFMNTRPVEDQLINRAIRDGYGGF-PTGLHPALFLYMEVEPALVD 296 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG----ISTSSVLSKKMISSFHQDNAPK 352 VNVHPAK +RFR + N I+++I + K + ++ ++ + H AP Sbjct: 297 VNVHPAKKEVRFRRSADVVNTIVEAIANTLQKHARQEIHAAAAPEPERTLPPAHSTTAPY 356 Query: 353 THLPKYATSL--------------TNTQEKLFLQENRLSTN------------------- 379 +P +T+ + Q L + Sbjct: 357 GEIPARSTNPGSAFPAAARPAPASSAAQPPLSSSAKQSHGAVPPPTLRAIPLKQVPATQG 416 Query: 380 --DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 D +D + + E + Q + + +T +GLV++ AA ER Sbjct: 417 KLDFHRQEDEETARNAHENAALERDASAGFSYLGTLRQQFALFETPEGLVLMHPKAARER 476 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 +IFE++R + + SQ LL P ++DL + A+I + + G+ FG N I I Sbjct: 477 IIFERLRARREA-PMPSQQLLDPVVLDLDPRDFAVIRQFAPHFDQAGMAVTPFGQNTIRI 535 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA-TMACYGSIRSGRKMQSIE 556 IPA+L +N L +++D + S + + A + R ++ Sbjct: 536 ESIPALLELENARAFLLELVDRLTQSEFSRNAKRVAYETFIGEFARKSAWR--ERISPHR 593 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 +L+++ G+PT + + +I++ FG Sbjct: 594 APAILKDLLACEVPYCTPGGKPTLVNYSVPEIKRKFG 630 >gi|228470609|ref|ZP_04055466.1| DNA mismatch repair protein MutL [Porphyromonas uenonis 60-3] gi|228307736|gb|EEK16712.1| DNA mismatch repair protein MutL [Porphyromonas uenonis 60-3] Length = 646 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 147/650 (22%), Positives = 276/650 (42%), Gaps = 68/650 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RP+ +KEL+EN++DA ++++ + GK ++ D+G G Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASMLKELVENAIDAHATQIAIELQDAGKELMRVIDDGVG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKIS DD + + GFRGEAL SI AV+ + L++R ++ G + Sbjct: 65 MSPLDARMAFERHATSKISSVDDLFTLRSMGFRGEALASIVAVAQIELITRQADSDIGYK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G ++ S P GT + V++LF+ +PAR FLK + E I R+A+ YP Sbjct: 125 LLINGSEVISSAPTVAEIGTSITVKNLFYNVPARRRFLKGSETELRHIYRQFERIALVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++FT + + + RI ++G+ + + + + + G+ +P Sbjct: 185 EIAFTLYSEGKLIRNLP----KSDLQHRIVDLLGKSYSKQLIPIEYQGPLANVSGFITLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + Q + F+NGR ++ + + + + + G P + ++DP ++DVN+H Sbjct: 241 RDAKRRGAQQFFFVNGRYMKHPYFHRAVMNVFEDLVAPGSQPNYFIYFQVDPSRIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL----- 355 P K+ I+F + I ++ +++ ++ + S + +A + Sbjct: 301 PTKTEIKFLDEQAIFKLLMVVLREHLSTTSAMPAITFSTDQLIEIPAYDATRQSSTALQP 360 Query: 356 ------PKYAT--SLTNTQEKLFLQENRLSTNDLLPS----DDPTYSEDNDPVEESEATH 403 P+Y +++ +K + +S+ DD + ES+ T Sbjct: 361 PPVQIDPEYNPFKAISTDDQKPLDPLSSMSSGSPAHWESFIDDFQQRRGESTLPESQPTE 420 Query: 404 --------------------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + Y+ + +D L ++ A R+ +E+ Sbjct: 421 AAPTAMDPLFTVSASPSQPVPHSSNLVYTFQERYLFTTMSDRLAVIQIERALLRIYYEQQ 480 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF-------GPNAIA 496 +Q LL E + L E E L ++G + N Sbjct: 481 IATLTLEPDQAQPLLFAEELSLPSDLYPTHHELVESLQQIGFEITPQAEASADPDENVYL 540 Query: 497 IREIPAILSKKNIPQLLR----DIIDEIIDSSTTYTLQDRIENILATM-----ACYGSI- 546 I +P L + L+ + +D++ T TL ILA + A +I Sbjct: 541 ITSVPKPLRPIGVADLITKTLGEYLDQVDKDDTDTTLPPA--EILAQLFLSGEALRQAIE 598 Query: 547 --RSGRKMQSIEMN--RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 R + + +++ ++ PNS GR + L +I+K F Sbjct: 599 LVR--HTLHARAAQPSQIISDLFLTPNSQFDPLGRSIMVSLTSDEIDKWF 646 >gi|327405501|ref|YP_004346339.1| DNA mismatch repair protein mutL [Fluviicola taffensis DSM 16823] gi|327321009|gb|AEA45501.1| DNA mismatch repair protein mutL [Fluviicola taffensis DSM 16823] Length = 625 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 161/628 (25%), Positives = 296/628 (47%), Gaps = 45/628 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + NQIAAGE+++RP+ +KEL+ENS+DA ++++E I G++ QI DNG G Sbjct: 5 IRLLPDHVANQIAAGEVVQRPASVVKELVENSIDAGATKIELHIKDAGRTLIQIVDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + M+ +RH TSKI +DD + T GFRGEAL SI A++H+TL ++ + G + Sbjct: 65 MSPLDARMSFERHATSKIANADDLFALKTKGFRGEALASIAAIAHVTLQTKRATDELGTK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G ++ + P G E+++LFF +PAR NFLKS+ VE I D R+ + + Sbjct: 125 IVIEGTQVVNQEPTQCAVGCNFEIKNLFFNVPARRNFLKSDNVEFKHIIDEFERVVLPHH 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF Y ++ +RI V G+ F ++ V + E+++ + L G+ G P Sbjct: 185 DISFRLVHNDQEIYHLSPGP----LRKRIVDVFGKKFTDHLVPVTEQTDIVELNGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + + ++F+N R +D + I A+ +P +P L L+IDP+Q+DVNVH Sbjct: 241 EVAKKSRGEQFLFVNNRFFKDTYFNHAISAAFEHLLPSKLFPSYFLFLDIDPKQIDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM------------------- 341 P K+ I+F I + I +++ + K I+ + ++ Sbjct: 301 PTKTEIKFEEDKAIYSIIRSAVRLGLGKFNITPTLDFERETEFDIPVSMIGQTPVAPEIR 360 Query: 342 ----------------ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 + + N + +PK A+ + + F + + S+ D L + Sbjct: 361 VDKNYNPFHAHNTREGQFAANHANTNTSSVPKNASFSSALNKAGFGSQFQSSSLDELWNS 420 Query: 386 DPTYSEDNDPVEESEAT-HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 + +E + + + + +++IS +GL++ +ERL++ + Sbjct: 421 ESVENELKETQTQIQIDVEALKSTGPFIVKGSFVISSVPEGLLVFHYRRIYERLLYNDLM 480 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 + F + SQ L+ P L + E EH++ L R+G ++ I I IP IL Sbjct: 481 RGFFVNPLASQQLIFPMEKKLSKQEQLAWNEHEKTLSRIGFNW-KWEQQDIHIHGIPEIL 539 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 + + + I++++ T + +L+ +A GS+ + + + Sbjct: 540 DESTVLSCVDKILEQL--QMGTLDKGEIAHTVLSQIAFAGSMSFKIPNDQQAIADYIARL 597 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 ++ + G+ ++ I +LF Sbjct: 598 FESDEHTFSPSGKRIIAQITNEQIIQLF 625 >gi|301168660|emb|CBW28251.1| methyl-directed mismatch repair protein [Haemophilus influenzae 10810] Length = 637 Score = 402 bits (1032), Expect = e-109, Method: Composition-based stats. Identities = 160/604 (26%), Positives = 277/604 (45%), Gaps = 71/604 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKITDLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ + K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIVRQYRPAEAINQQLKRVAAICGDDFVKNALRIEWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDVYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + S + + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISYALNNQEQLNWHTDQSAVENREENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRL------------------------------------- 376 P A + N+ + ++ + Sbjct: 361 IRPNRAAAGQNSFAPQYHEKPQQNQPHFSNTPVLPNHVSTGYRDYRSDAPSKTEQRLYAE 420 Query: 377 ----------------STNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 + ++ + S+ + A + I ++ Sbjct: 421 LLRSLPPTAQKDISDTAQQNISDTAQQNISDTAKIISTEIIECSSHLRALSLIENRALLL 480 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 Q ++ E+L + + +I Q LL P I L E + ++ +D Sbjct: 481 QQNQDFFLLSL----EKLQRLQWQLALKQIQIEQQPLLIPIIFRLTEAQFQAWQQYSDDF 536 Query: 481 HRLGIK-AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 ++G + E + + ++P+ L +N+ + + ++ +SS + + A Sbjct: 537 KKIGFEFIENQAQLRLTLNKVPSALRTQNLQKCVMAMLTRDENSS------SFLTALCAQ 590 Query: 540 MACY 543 + C Sbjct: 591 LECK 594 >gi|212696180|ref|ZP_03304308.1| hypothetical protein ANHYDRO_00716 [Anaerococcus hydrogenalis DSM 7454] gi|212676809|gb|EEB36416.1| hypothetical protein ANHYDRO_00716 [Anaerococcus hydrogenalis DSM 7454] Length = 601 Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats. Identities = 165/609 (27%), Positives = 296/609 (48%), Gaps = 24/609 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI +L EK I QIAAGE+IE P IKEL+ENS+DA++ + I GGKS+ ++TD+G Sbjct: 2 MKIIELDEKTIEQIAAGEVIESPVSIIKELVENSIDADAKNIIVEIKNGGKSYIRVTDDG 61 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++ A +RH TSKI D D I + GFRGEAL SI + + + +S+ G Sbjct: 62 VGIEEDDFIRAFKRHATSKIKDFSDLYRIFSLGFRGEALSSIISCADVKAVSKTSNQEIG 121 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ KI S +A N GT +EV +LF +P R FL S+ E+N I+ +I+ +A+ Sbjct: 122 KKLEFKNGKIGSKSSIATNNGTSIEVFNLFSNLPVRRKFLGSDINESNKISKIIQALALG 181 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 Y VS F ++ N + ++I +I E+ +N +++ K++ + GY Sbjct: 182 YENVSLKFIKDNRLVFQTL---ENDSLKDKIINLIDENLKDNILKIKAKNSLYNISGYIS 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + RGN + Y+F+N R +++ I + + Y +IP RYP L ++ D +DVN Sbjct: 239 NTNYYRGNRSFQYIFVNNRLIENNNISKAVESKYKSSIPNQRYPAFFLFIKTDTNNIDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI--NKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 +HP K I+F + + ++ K + N +K +F+ D A +L Sbjct: 299 IHPNKKEIKFTYEDNLIELLEDNVSKVLYENSDFKKVKVPEDQKEELNFYDDYAEVLNLY 358 Query: 357 KYATSLTNTQEKLFLQENRLST-----------NDLLPSDDPTYSEDNDPVEESEATHYQ 405 N+ EK + + +S N + + S++ + + Sbjct: 359 NKVNEEKNSYEKENIDDKSISDTHDDFFEVEELNFIEKEEKKKVSKELEDKRNKNFIDTK 418 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 + I Y + D ++++D A +R+ F++ ++F ++ SQ LL +II + Sbjct: 419 NLLYKTSIFNRYSLFINLDKILLLDHRRADQRIKFDEFIENFKKNQMNSQQLLEAKIIKV 478 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 E +E + +LG + + F + + IR +P + + +++D ID S Sbjct: 479 SLEEYNKYIEKKDVFKKLGFEIDTFSFDKLIIRSVPIVFDNPENLEFFYNLLD--IDDSK 536 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 ++++ +++ + R G K+ E + ++ K+ N + G+PT I ++ Sbjct: 537 EDLFKEKLSSLIN----KNTFRKGDKIDESEAYATIDKLNKSENPYKTYDGKPTIIAIEE 592 Query: 586 SDIEKLFGR 594 +++EK F R Sbjct: 593 NELEKYFDR 601 >gi|282856371|ref|ZP_06265650.1| mismatch repair protein MutL [Pyramidobacter piscolens W5455] gi|282585742|gb|EFB91031.1| mismatch repair protein MutL [Pyramidobacter piscolens W5455] Length = 609 Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats. Identities = 176/630 (27%), Positives = 283/630 (44%), Gaps = 61/630 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I +L + + +IAAGE+IERP +KELIENSLDA ++ ++ + GGK + DNG Sbjct: 2 MGIHRLPDGLSRKIAAGEVIERPLSVVKELIENSLDAGATAIDVELEQGGKVLISVKDNG 61 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+P+AV++H TSKIS D I T G+RGEAL S+ AVSH + SR P G Sbjct: 62 GGIVPEELPLAVEKHATSKISSEADLEAIATLGYRGEALSSVCAVSHFEIYSRRPDLPEG 121 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 A + V V + PGT V V+DLF+ +PAR FLK+ E I+ +++ A A Sbjct: 122 ASLHYENGA-PRVTAVPLRPGTTVVVKDLFYNLPARRKFLKTAAAEFRRISRLVQDYAFA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIG--EDFINNAVELNEKSNEITLQGY 236 YP V+F+ + N +K S +G + ++++ G + +A E S + Q Sbjct: 181 YPAVAFSLTHDGKNVFK---SSGDGGVEKLLARMWGDEPEIRASASETATSSVRLWWQ-- 235 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 + Q F+NGR V D + IR+A +++L + VD Sbjct: 236 ----DLGPQSRFQLISFVNGRRVSD----AVIRSAIHGF-HWATRGNWLVMLALPAEDVD 286 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHPAKS I FR + + + ++ ++ + +M S +AP P Sbjct: 287 VNVHPAKSEILFRRSGEVYDLVRKAAERLAKGFSDAPILGRVGRMPDSSPSFDAPAESFP 346 Query: 357 K------------------------------YATSLTNTQEKLFLQENRLSTNDLLPSDD 386 + + N QE Sbjct: 347 AGGTTAQGGSAAWRRPPEREPHPFSRLEEPVFRAASPNAFAARGSQEASGERLPFSSYRQ 406 Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 + + +E+ + AQ+ Q Y++ T DGL+IVD HAAHER+ +E++ + Sbjct: 407 TAPASSSGETSAAESAAPDGKLYLAQLPQGYLVFSTPDGLLIVDPHAAHERVNYERILKA 466 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI--L 504 + + ++ I L M + L L + G + +P + Sbjct: 467 CADPRGQEKLIMP---IPLPPTLKDDAMANRGKLAELNFAIDEDGS----LSRLPVHAKV 519 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 + LLR ++ I + D + N+ AT AC S++ ++++ E +LL E+ Sbjct: 520 VGVSPVDLLRSALNAIGERREHS---DSLVNVFATKACKASVKLTTRLEAAEAYQLLAEL 576 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 E+ + C HGRPT ++L +++ FGR Sbjct: 577 ERCDQPNACPHGRPTVLRLTGGALDRHFGR 606 >gi|298372649|ref|ZP_06982639.1| DNA mismatch repair protein MutL [Bacteroidetes oral taxon 274 str. F0058] gi|298275553|gb|EFI17104.1| DNA mismatch repair protein MutL [Bacteroidetes oral taxon 274 str. F0058] Length = 599 Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats. Identities = 158/600 (26%), Positives = 282/600 (47%), Gaps = 21/600 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RP+ +KEL+ENS+DA + ++ V+ G G++ Q+ DNG G Sbjct: 5 INILPDSIANQIAAGEVIQRPASVVKELVENSVDAGADKISVVVKGAGRTLVQVADNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + M+ +RH TSKIS D + T GFRGEAL SI AV+ + + +R + G Sbjct: 65 MSHTDARMSFERHATSKISKAGDLFGLRTMGFRGEALASIAAVAAVEMRTRQAGADFGTV 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+ I P + GT+ V++LFF +PAR FLKS++ E I +R+A+A P Sbjct: 125 VEIAASNIIRHEPDSCVEGTVFAVKNLFFNVPARRKFLKSDETELRHIIYEFQRVALANP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGED---FINNAVELNEKSNEITLQGYT 237 + + Y++ GNF +RI+ + G+ + + +++ ++N + + G+ Sbjct: 185 HIELSLYNGTEALYELPA----GNFKQRITAIFGKKSKNYASQLIDIAAETNLVKISGFV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P NA + F+NGR ++ + I+ AY +P P+ + LE+ P +DV Sbjct: 241 GSPQSASRNAT-QFFFVNGRFMRHPYFGKAIQMAYDNMLPHDTQPIYFITLEVKPENIDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK------KMISSFHQDNAP 351 NVHP K+ I+F + I I+ +++++ K S + ++ + P Sbjct: 300 NVHPTKTEIKFEDEKEIFAIIMSCVRESLGKFNFLPSLDFDTNRTLDIPAYLADNKPDMP 359 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT--HYQLGIA 409 + + + + D+L + D E+ Sbjct: 360 RVNTDNNYNPFAAAHSTSSNRGISVKNWDMLYERRQQQTSPYDTAEQKAFFSPDEVAKSN 419 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Y+I+ GL+I+D+ A ER+ +E++ + +Q LL E I E Sbjct: 420 FWIYRDKYLITAVKSGLMIIDRQLALERITYEQILIRLQQGQKATQALLFAETITFSADE 479 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK-KNIPQLLRDIIDEIIDSSTTYT 528 +L +G ++ + I IP+ L++ ++P LLRDI+ ++D++T Sbjct: 480 NITFETILPELEAMGFDIDKLSAPSYTIAGIPSFLTEVGSVPDLLRDIVGYVVDNTTVG- 538 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 ++ E I A + ++ + + E L+ + + + G T + L +DI Sbjct: 539 -KEIYEKIAIRTAKAYARKTHSNLNAQETEALIASLFQCRTPNYSPEGIKTVVILSDADI 597 >gi|157363591|ref|YP_001470358.1| DNA mismatch repair protein MutL [Thermotoga lettingae TMO] gi|167012379|sp|A8F560|MUTL_THELT RecName: Full=DNA mismatch repair protein mutL gi|157314195|gb|ABV33294.1| DNA mismatch repair protein MutL [Thermotoga lettingae TMO] Length = 549 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 173/596 (29%), Positives = 290/596 (48%), Gaps = 50/596 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI++L + I+++IAAGE+I +KELIENS+DA + R+ + GGKS ++ DNG Sbjct: 1 MKIKRLDKSIVSRIAAGEVITGVYSVVKELIENSIDAGADRIVVELINGGKSEIKVQDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM +++ + + H TSKI D +++FGFRGEAL SI +S T+ S+ +N G Sbjct: 61 EGMEKDDLLVCYESHTTSKIDSFQDIYTLNSFGFRGEALYSICQISKTTIFSKTASSNLG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I + + +PV + GT V VRDLFF +PAR FLKS VE + +V R ++ Sbjct: 121 HEIEVVAGHLVYEKPVQIEKGTTVIVRDLFFNVPARRKFLKSNAVEARMAVEVFERFCLS 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P ++ + + Y + + +RI + + +++ + + ++ L G Sbjct: 181 HPHINLILTKDQQVVYNLPATT----LVQRIKALFPDIPMDSLKAIQSQWKDMELHGCAV 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P N + F+NGR V ++ + S I +AYA+ + +PVV++ L + P+ +DVN Sbjct: 237 SP-ANLRRKKAIFTFVNGRFVVNQLLQSAIYSAYADFLHQKEHPVVIVNLFLPPKDIDVN 295 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K ++F + F+ SI+ + +I ++ K + Sbjct: 296 VHPQKIEVKFSRDEEVFRFVRDSIKSQLK-----------IPIIHHISRNTPAKVQKRQV 344 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 N + +E + D + + YI Sbjct: 345 EYKSPNAKFTTTSEEMLIPPEDF--------------------------KIIGIVRKRYI 378 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 I +T D L IVD HAAHERLI+ KM N LL P I+L E E ALI ++ Sbjct: 379 IVETEDELFIVDFHAAHERLIYNKMLSSLNQN--DGTDLLIPVQIELRESELALIEKN-N 435 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L ++G E N + +++IP L + ++ + + D IDEI Y L++ ++ I+A Sbjct: 436 VLKQIGFDYEII-KNQLIVKKIPTWLDQSDVKRFIIDSIDEIK-LIDIYGLEEVMKKIIA 493 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++C ++R+ ++ + L+RE+ N S C HGRP + +++ F R Sbjct: 494 DISCKSALRTRDRLDLSQAKYLVREIFANKIS-TCPHGRPVMYSINFKELDSFFER 548 >gi|223983838|ref|ZP_03634003.1| hypothetical protein HOLDEFILI_01284 [Holdemania filiformis DSM 12042] gi|223964201|gb|EEF68548.1| hypothetical protein HOLDEFILI_01284 [Holdemania filiformis DSM 12042] Length = 667 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 177/672 (26%), Positives = 284/672 (42%), Gaps = 86/672 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N IAAGE++ERP IKEL+EN+LDA+++R+E I GG ++ DNG Sbjct: 3 KIQQLDAHLTNMIAAGEVVERPMGVIKELVENALDAKATRIEVNINQGGTELMEVIDNGV 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ + +RH TSKI ++D IHT GFRGEALPSI +VS+LTL++ +++ Sbjct: 63 GMDREDACLCFERHATSKIKTTEDLWAIHTLGFRGEALPSIASVSNLTLLTNNGEDS--T 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I + S RP N GT + V LF PARL LKS ET+LI DVI++ A++Y Sbjct: 121 RVEIRYGQRQSARPYPCNQGTQITVNGLFQKTPARLKHLKSIPYETSLILDVIQKFALSY 180 Query: 180 PKVSFTFSTIKSNRYK---------MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE 230 P V+F ++ + + + +V G+DF Sbjct: 181 PDVAFRLVHDGKEVFRSAGNGSLLEVMAIIYGRDLARQCIEVEGQDFD----YTVRGLMA 236 Query: 231 ITLQGYTGIPTFNRGNANQFYVFING---------------------------------- 256 + Q + Sbjct: 237 LPAQTRASRNYMTVFINRRMIRSYRIQKAILEAYKNYIPQDRYPIVMLDIEMDSHLCDVN 296 Query: 257 --------RTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV--------- 299 R +++ + IR T+ V+ +E +V++ Sbjct: 297 VHPSKWEIRLSKEQQLEFLIRDTLTRTLREHMQAPEVMRVETPREKVEMPQLFETPVVVP 356 Query: 300 -----------HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 + + + R I + + I + T + ++ + + Sbjct: 357 ANQVREDSVEANEWRRQAALMSEQREREQIAAPLSREIPQDPEVTGKAEASAVLPAEPEA 416 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA------T 402 KT + S T + + S +D LP +P +EA Sbjct: 417 LIKKTEVENREGSPLTTPKPTAKTSSADSLSDQLPEPEPLDPRVQQTEASAEALRSVPKQ 476 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + AQ+H YI++Q L IVDQHAA ER+ FE+++Q F + Q LL P I Sbjct: 477 TFPQMQVLAQMHGKYILAQDEHALYIVDQHAAQERVHFEEVQQRFLDQEPLMQELLVPII 536 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 ++ A + E +E L + I E FG N++ R++PA +S+ + L+D++D + Sbjct: 537 LEGSASVAARLQEMNELLEPMHIHLENFGQNSLICRQLPAWMSEIDEQAFLQDVLD-LWK 595 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 +D + LAT+AC+ SIR R + EM ++ ++ C HGRPTFI Sbjct: 596 DGREVRAEDLQRHRLATIACHHSIRFNRVLSIGEMQEVIEQLAHCEQPYHCPHGRPTFIT 655 Query: 583 LKLSDIEKLFGR 594 + + K F R Sbjct: 656 ITEKQLIKEFQR 667 >gi|311281278|ref|YP_003943509.1| DNA mismatch repair protein MutL [Enterobacter cloacae SCF1] gi|308750473|gb|ADO50225.1| DNA mismatch repair protein MutL [Enterobacter cloacae SCF1] Length = 623 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 158/578 (27%), Positives = 264/578 (45%), Gaps = 42/578 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIRQEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQPEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + RP A GT +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMDVTVRPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + + G R+ + G F+ +A+ + + ++ L+G+ Sbjct: 181 ARFDVTINLNHNGKAVRQYRAVPEGGQKERRLGAICGVPFVEHALAIEWQHGDLALRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P + A Y ++NGR ++D+ I IR A + + G P VL LEIDP QVD Sbjct: 241 ADPQYTTAQLAEIQYCYVNGRMMRDRLINHAIRQACEDKLGAGEQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------------- 343 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQVDAPLPLARESDDAQSPARYVPENRVA 360 Query: 344 ----------SFHQDNAPKTHLPKYA--------TSLTNTQEKLFLQENRLSTNDLLPSD 385 + + AP+ P A S + + ++ LL + Sbjct: 361 AGRNQFAEPVAAREAAAPRYTAPAPAGGSARSGGASAWPHAQPGYQKQQGTLYRQLLETP 420 Query: 386 DPTYSEDNDPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + E G + + + + L ++ A L ++ Sbjct: 421 EAGRKAPEAAPAEERLSGHSSSFGRVLTIVGGDCALLERDGRLSVLALPVAERWLRQAQL 480 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + I +Q LL P + + GE A + + L ++G++ + + +R +P Sbjct: 481 SPERTD--ICAQPLLIPLRLKVSPGEQAALQQAQAVLAQIGVEIQS-DVQHVTVRAVPLP 537 Query: 504 LSKKNIPQLLRDIIDEIIDSS--TTYTLQDRIENILAT 539 L ++N+ L+ ++I + TL + LA+ Sbjct: 538 LRQQNLQILIPELIGYLAQQPACDAGTLAQWLARNLAS 575 >gi|320013763|gb|ADV97334.1| methyl-directed mismatch repair protein [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 637 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 159/627 (25%), Positives = 276/627 (44%), Gaps = 69/627 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEE--IPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G++ ++ + +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR + + Sbjct: 61 CGISKDDLALALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQS 120 Query: 117 TGAQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 Q G + +++P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+ Sbjct: 121 EAWQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRI 180 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A+A V+ + + R++ + G F+ +A+ + + ++ + G Sbjct: 181 ALARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGDLNIHG 240 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 + P + + Y ++N R ++D+ I IR AY + + + P VL L+IDP QV Sbjct: 241 WVADPAASHTLSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQV 300 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN------ 349 DVNVHPAK +RF ++ +FI Q++ + + ++ + + + Sbjct: 301 DVNVHPAKHEVRFHQARLVHDFIYQAVTAVLQQTNAPILNISEEGEVDAPRWQQENRVAA 360 Query: 350 -APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN--------------- 393 K P+ A S Q + + +D Y + Sbjct: 361 GTNKYAQPEAAKSSAAEQAVARERSSARERAAPAYKEDHPYQKQQGELYRQLLQPSAAAK 420 Query: 394 ------------------------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 E +Y G Y + + G+ ++ Sbjct: 421 PATSPAAIPASSVSSPSIPVQRITQAEEPLHGDNYSFGRVLTVFPPCYALIEYQGGVALL 480 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 A ER ++ + + Q LL P I L + E A H++ L +GI+ Sbjct: 481 SL-AVAERW-LKQAQLSPPEEGLRPQPLLIPLKITLDKNEIAACQNHEKLLITMGIELSV 538 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIR 547 A +R + L ++N+ +L+ +++ + + LAT +A + GS Sbjct: 539 EQGRA-TLRAVSLPLRQQNLQKLIPELLGYLSQHEEISP------DTLATWLARHLGS-- 589 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCN 574 + +LL E+E+ C Sbjct: 590 EHEVWNVSQAIQLLTEVERL-----CP 611 >gi|329919572|ref|ZP_08276561.1| DNA mismatch repair protein MutL [Lactobacillus iners SPIN 1401G] gi|328937377|gb|EGG33799.1| DNA mismatch repair protein MutL [Lactobacillus iners SPIN 1401G] Length = 625 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 173/632 (27%), Positives = 289/632 (45%), Gaps = 52/632 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KLS ++ NQIAAGE+IERP+ IKEL EN+LDA S+R++ G + DNG Sbjct: 3 KIHKLSSELTNQIAAGEVIERPASVIKELCENALDAGSTRIKIDFIDAGLKQIVVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++EI +A RH TSKI+ D NI T GFRGEAL SI AV+ + +++ + G Sbjct: 63 GIAADEIDLAFMRHATSKINTNHDLFNIATLGFRGEALASIAAVAKVDIVTNT-GDVNGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A GT + V+DLF+ PARL +LKSE+ E I D++ R+A+ Y Sbjct: 122 HAIFEDSNKVKQEAIASPQGTKIVVKDLFYNTPARLKYLKSERTEIMKIVDIVNRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + + ++ + + + + + + G + + +S + + G Sbjct: 182 PQVSFELT---NRQKQLLKTTGHDDLRQTAANIYGIKVAEKMLAIYAQSPDFKIAGLISR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R N + +N R V++ ++ I Y + GRYP ++ +++DP VDVNV Sbjct: 239 ADDTRSTRNFITLLLNTRYVKNYRLVQAIVDGYGTRLLKGRYPFAIVKIDLDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISSFHQ---------- 347 HP K +R + + I+++I +A+ + I++ ++ + Q Sbjct: 299 HPTKQEVRLSKESELARLIVRTIDQALGATEHEIASFDDATESKQTKLDQLEFNLNEAVV 358 Query: 348 DNAPKTHLPKYATSLTNTQEKL------------------------FLQENRLSTNDLLP 383 D + LT+ K+ + + T Sbjct: 359 DTSRIPVEFSIPNDLTDDSSKVKEDDTTFVSLKHPRQDEHYLVTTTWDANVQAQTALSPF 418 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S SE E+ Q+H+ Y+++ + L IVDQ AA RL F+K+ Sbjct: 419 SASSLSSEVTTSSEQILVNKLPQLQCLGQMHE-YLLATADNDLYIVDQVAADNRLAFDKL 477 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + QTLL I+D + + + D +LG+ E FG + ++E P Sbjct: 478 LLQMQAENNYEQTLLDNIILDFSMIDFLKVQDKLADFKKLGLNLEEFGGRSFVLQEYPLW 537 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE---NILATMACYGSIRSGRKMQSIEMNRL 560 L + Q ++ +ID I+ ++ RIE I+AT + IR + + S+EM + Sbjct: 538 LENCDQLQ-IKAVIDLILAHINAPIVKIRIELAKKIVATK--H--IRR-KSLNSLEMVEM 591 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 L + + N G+ K+ +D+ KLF Sbjct: 592 LTSLSNSSNPYHDPFGKIIIAKISENDLRKLF 623 >gi|313206566|ref|YP_004045743.1| DNA mismatch repair protein mutl [Riemerella anatipestifer DSM 15868] gi|312445882|gb|ADQ82237.1| DNA mismatch repair protein MutL [Riemerella anatipestifer DSM 15868] gi|315023438|gb|EFT36446.1| DNA mismatch repair protein MutL [Riemerella anatipestifer RA-YM] gi|325335986|gb|ADZ12260.1| DNA mismatch repair enzyme (predicted ATPase) [Riemerella anatipestifer RA-GD] Length = 598 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 160/606 (26%), Positives = 278/606 (45%), Gaps = 32/606 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + NQIAAGE+++RP+ +KELIEN++DA++++VE +I GK+ Q+ DNG G Sbjct: 5 IRLLPDYVANQIAAGEVVQRPASVVKELIENAIDAKATKVELIIREAGKNLIQVVDNGAG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKI ++D I T GFRGEAL SI AV+ + L ++ ++ G Sbjct: 65 MSETDARMAFERHATSKIYATEDIFKIATKGFRGEALASIAAVAQVELKTKKEEDIVGTN 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G ++ V + G+ V++LF+ +PAR FLKS VE I D R+A+A+ Sbjct: 125 IYIEGGELQFQEAVQTSEGSNFAVKNLFYNVPARRKFLKSNNVEFRHIIDEFHRVALAHE 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F+ +K+ + +RI + G + + E + + L GY P Sbjct: 185 DIEFSLYHNDEEIFKLR----KASLLQRIVDIFGRKLQPLLIPIKEDLDWVKLNGYVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + + + F+NGR + ++ ++ A+ + G P L LEIDP ++DVN+H Sbjct: 241 EGAKKSRGEQFFFVNGRFFRSAYLNKAVQEAFDGLLQQGYNPSFFLYLEIDPEKIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ I+F + T+I I +I+K++ +S S K S Q ++H PK Sbjct: 301 PQKTEIKFEDETLIFALIRSTIKKSLGVYNVSPSLDFDKDESQS--QLLGLQSHYPKATL 358 Query: 361 SLTNTQEK-----------LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT-HYQLGI 408 S++N+ K F QE + + ++ + S Sbjct: 359 SISNSSYKAPSIQVDRDYNPFQQERVKPSESIALTELYSQSITTAEPSRINLFEDEDFDE 418 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 ++ Y + + +++D H ++ E+ +Q + LL L E Sbjct: 419 DLMRLPNGYWLYNRGEDTLMLDLGRMHSVVVSERRKQKKETGVGQ--KLLFSIEYLLNEM 476 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 E + L +LG + E N + I +P L +K + + L + E++D T Sbjct: 477 EKNKYRSIKKYLPQLGFEMELGDDNVLRINAVPNGLKEKQVNEFLEK-LFEVLDYKTEEE 535 Query: 529 LQDRIEN---ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 EN + + R E+ +++++ G+ +I L L Sbjct: 536 FMAYYENQWTKINAKS-----RF-DFFYKTEVEQMIKDFSDLGFPEYTPSGKKCYIALPL 589 Query: 586 SDIEKL 591 D++ Sbjct: 590 EDLKNK 595 >gi|238918366|ref|YP_002931880.1| DNA mismatch repair protein MutL [Edwardsiella ictaluri 93-146] gi|259509931|sp|C5BDM9|MUTL_EDWI9 RecName: Full=DNA mismatch repair protein mutL gi|238867934|gb|ACR67645.1| DNA mismatch repair protein MutL [Edwardsiella ictaluri 93-146] Length = 639 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 163/623 (26%), Positives = 279/623 (44%), Gaps = 64/623 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ +A+ RH TSKIS DD I + GFRGEAL SI +VS LT+ SRP Sbjct: 61 GGIGKAELALALARHATSKISTLDDLEAIVSLGFRGEALASISSVSRLTMTSRPEGQAEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ V+P A GT VEV DLF+ PAR FL++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGREMAVMVKPSAHPVGTTVEVLDLFYNTPARRKFLRTEKTEFAHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A ++ T + R+ + G F+ +A+ L + +E+ + G+ Sbjct: 181 ARFDITLTLQHNGKTVRQYRAVKEGDARERRLGAICGPVFVQHALALTWRHDELAIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R Y ++NGR ++D+ I IR AY + + P VL LEIDPRQVDV Sbjct: 241 AAPQAIRQIGELQYCYVNGRMMRDRLITHAIRQAYQDRLSDEMPPAYVLYLEIDPRQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ + + + ++++ IS +D P+ + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVVEVLQQAQVASAHDDPTPAISGAARDEEPRGVENR 360 Query: 358 -----------YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN------------- 393 ++ + + + R+ D+ + + Sbjct: 361 ASAGENRFNRPASSPVASAPRPAHVAAPRMPAGDIFRRREGELYQRLLAANPAPAAETDS 420 Query: 394 --------------------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 E+ A G +++ G+ +V Sbjct: 421 AFVAAPGAPVTVAGPPAVAVSTAAENGAPGDSFGRVLTLCADGVALTECRSGVALVS--L 478 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 H R + + + +Q LL P + L E + L ++G++ + + Sbjct: 479 FHARRCLLRAQLQPPDEGLKAQPLLVPLRLTLEAAERQALKTQQPLLQQMGLRLQPERQH 538 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSS--TTYTLQDRIENILATMACYGSIRSGRK 551 A+ + +P L ++N+P+L+ ++ + +S +L D + + + + Sbjct: 539 AL-LHAVPLPLRQQNLPRLIPQMLRYLATASVCDAASLADWLAAHW-----HSADEA--P 590 Query: 552 MQSIEMNRLLREMEKNPNSSQCN 574 + +LL ++E+ C Sbjct: 591 WTVAQAVQLLADLERL-----CP 608 >gi|309972799|gb|ADO96000.1| DNA mismatch repair protein MutL [Haemophilus influenzae R2846] Length = 637 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 154/578 (26%), Positives = 269/578 (46%), Gaps = 65/578 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ ++ K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIVRQYRPAFDLNQQLKRVAVICGDDFVKNALRIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + S + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISYALNNQEQLNWHTEQSAVENHEENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLFLQENRL------------------------------------- 376 P A + N+ + ++ + Sbjct: 361 IRPNRAAAGQNSFAPQYHEKPQQNQPHFSNTPVLPNHVSTGYRDYRSDAPSKTEQRLYAE 420 Query: 377 ----------------STNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 + ++ + S+ + A + I ++ Sbjct: 421 LLRTLPPTAQKDISNTAQQNISDTAQQNISDTAKIISTEIIECSSHLRALSLIENRALLL 480 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 Q ++ E+L + + +I Q LL P + L E + ++ ++ Sbjct: 481 QQNQDFFLLSL----EKLQRLQWQLALQQIQIEQQPLLIPIVFRLTEAQFQAWQQYSDNF 536 Query: 481 HRLGIK-AERFGPNAIAIREIPAILSKKNIPQLLRDII 517 ++G + E + + ++P +L +N+ + + ++ Sbjct: 537 KKIGFEFIENQAQLRLTLNKVPNVLRTQNLQKCVMAML 574 >gi|312870739|ref|ZP_07730846.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LEAF 3008A-a] gi|311093751|gb|EFQ52088.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LEAF 3008A-a] Length = 625 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 173/632 (27%), Positives = 287/632 (45%), Gaps = 52/632 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KLS ++ NQIAAGE+IERP+ IKEL EN+LDA S+R++ G + DNG Sbjct: 3 KIHKLSSELTNQIAAGEVIERPASVIKELCENALDAGSTRIKIDFIDAGLKQIVVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++EI +A RH TSKI+ D NI T GFRGEAL SI AV+ + +++ + G Sbjct: 63 GIAADEIDLAFMRHATSKINTNHDLFNIATLGFRGEALASIAAVAKVDIVTNT-GDVNGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A GT + V+DLF+ PARL +LKSE+ E I D++ R+A+ Y Sbjct: 122 HAIFEDSNKVKQEAIASPQGTKIVVKDLFYNTPARLKYLKSERTEIMKIVDIVNRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + ++ + + + + + + G + + +S + + G Sbjct: 182 PQVSFELTNQQK---QLLKTTGHDDLRQTAANIYGIKVAEKMLAIYAQSPDFKIAGLISR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R N + +N R V++ ++ I Y + GRYP ++ +++DP VDVNV Sbjct: 239 ADDTRSTRNFITLLLNTRYVKNYRLVQAIVDGYGTRLLKGRYPFAIVKIDLDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISSFHQ---------- 347 HP K +R + + I+++I +A+ + I++ ++ + Q Sbjct: 299 HPTKQEVRLSKESELARLIVRTIDQALGATEHEIASFDDATESKQTKLDQLEFNLNEAVV 358 Query: 348 DNAPKTHLPKYATSLTNTQEKL------------------------FLQENRLSTNDLLP 383 D + LT+ K+ + + T Sbjct: 359 DTSRTPVEFSIPNDLTDDSSKVKEDDTTFVSLKHPRQDEHYLVTTTWDANVQAQTALSPF 418 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S SE E+ Q+H+ Y+++ + L IVDQ AA RL F+K+ Sbjct: 419 SASSLSSEVTTSSEQILVNKLPQLQCLGQMHE-YLLATADNDLYIVDQVAADNRLAFDKL 477 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + QTLL I+D + + + D +LG+ E FG + ++E P Sbjct: 478 LLQMQAENNYEQTLLDNIILDFSMIDFLKVQDKLADFKKLGLNLEEFGGRSFVLQEYPLW 537 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE---NILATMACYGSIRSGRKMQSIEMNRL 560 L + Q ++ +ID I+ + RIE I+AT + IR + + S+EM + Sbjct: 538 LENCDQLQ-IKAVIDLILAHINAPLDKIRIELAKKIVATK--H--IRR-KSLNSLEMVEM 591 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 L + + N G+ K+ +D+ KLF Sbjct: 592 LTSLSNSSNPYHDPFGKIIIAKISENDLRKLF 623 >gi|259501312|ref|ZP_05744214.1| DNA mismatch repair protein HexB [Lactobacillus iners DSM 13335] gi|302190964|ref|ZP_07267218.1| DNA mismatch repair protein [Lactobacillus iners AB-1] gi|259167282|gb|EEW51777.1| DNA mismatch repair protein HexB [Lactobacillus iners DSM 13335] Length = 625 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 173/632 (27%), Positives = 287/632 (45%), Gaps = 52/632 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KLS ++ NQIAAGE+IERP+ IKEL EN+LDA S+R++ G + DNG Sbjct: 3 KIHKLSSELTNQIAAGEVIERPASVIKELCENALDAGSTRIKIDFIDAGLKQIVVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++EI +A RH TSKI+ D NI T GFRGEAL SI AV+ + +++ + G Sbjct: 63 GIAADEIDLAFMRHATSKINTNHDLFNIATLGFRGEALASIAAVAKVDIVTNT-GDVNGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A GT + V+DLF+ PARL +LKSE+ E I D++ R+A+ Y Sbjct: 122 HAIFEDSNKVKQEAIASPQGTKIVVKDLFYNTPARLKYLKSERTEIMKIVDIVNRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + ++ + + + + + + G + + +S + + G Sbjct: 182 PQVSFELTNQQK---QLLKTTGHDDLRQTAANIYGIKVAEKMLAIYAQSPDFKIAGLISR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R N + +N R V++ ++ I Y + GRYP ++ +++DP VDVNV Sbjct: 239 ADDTRSTRNFITLLLNTRYVKNYRLVQAIVDGYGTRLLKGRYPFAIVKIDLDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISSFHQ---------- 347 HP K +R + + I+++I +A+ + I++ ++ + Q Sbjct: 299 HPTKQEVRLSKESELARLIVRTIDQALGATEHEIASFDDANESKQTKLDQLEFNLNEAVV 358 Query: 348 DNAPKTHLPKYATSLTNTQEKL------------------------FLQENRLSTNDLLP 383 D + LT+ K+ + + T Sbjct: 359 DTSRIPVEFSIPNDLTDDSSKVKEDDTTFVSLKHPRQDEHYLVTTTWDANVQAQTALSPF 418 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S SE E+ Q+H+ Y+++ + L IVDQ AA RL F+K+ Sbjct: 419 SASSLSSEVTTSSEQILVNKLPQLQCLGQMHE-YLLATADNDLYIVDQVAADNRLAFDKL 477 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + QTLL I+D + + + D +LG+ E FG + ++E P Sbjct: 478 LLQMQAENNYEQTLLDNIILDFSMIDFLKVQDKLADFKKLGLNLEEFGGRSFVLQEYPLW 537 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE---NILATMACYGSIRSGRKMQSIEMNRL 560 L + Q ++ +ID I+ + RIE I+AT + IR + + S+EM + Sbjct: 538 LENCDQIQ-IKAVIDLILAHINAPLDKIRIELAKKIVATK--H--IRR-KSLNSLEMVEM 591 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 L + + N G+ K+ +D+ KLF Sbjct: 592 LTSLSNSSNPYHDPFGKIIIAKISENDLRKLF 623 >gi|238855607|ref|ZP_04645908.1| DNA mismatch repair protein MutL [Lactobacillus jensenii 269-3] gi|260665333|ref|ZP_05866181.1| DNA mismatch repair protein mutL [Lactobacillus jensenii SJ-7A-US] gi|282933019|ref|ZP_06338413.1| DNA mismatch repair protein MutL [Lactobacillus jensenii 208-1] gi|313473092|ref|ZP_07813576.1| DNA mismatch repair protein HexB [Lactobacillus jensenii 1153] gi|238831751|gb|EEQ24087.1| DNA mismatch repair protein MutL [Lactobacillus jensenii 269-3] gi|239528671|gb|EEQ67672.1| DNA mismatch repair protein HexB [Lactobacillus jensenii 1153] gi|260560837|gb|EEX26813.1| DNA mismatch repair protein mutL [Lactobacillus jensenii SJ-7A-US] gi|281302873|gb|EFA95081.1| DNA mismatch repair protein MutL [Lactobacillus jensenii 208-1] Length = 621 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 168/630 (26%), Positives = 291/630 (46%), Gaps = 52/630 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+EN++DA++S++E G + DNG Sbjct: 3 KIHELSETLTNQIAAGEVIERPASVVKELVENAIDAKASQIEIEFIDAGLKEVIVRDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ SE++ +A +RH TSKIS D I T GFRGEAL SI AVSH +++ G Sbjct: 63 GIASEDLDLAFRRHATSKISKERDLFKIATLGFRGEALASIVAVSHTEVITST-DGIKGV 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + +G + S A GT ++V DLF+ PARL +LKS + ET I D++ R+A+ + Sbjct: 122 KAEFAGGEKLSEETHASTKGTEIKVSDLFYNTPARLKYLKSPRTETMKIVDIVNRLALGH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 +++FT + N N + ++ + G + +E +++ + + G Sbjct: 182 SEIAFTLKNEGKL---LLKTPGNNNLRQDLANIYGRFIAKDMIEFSKEDPDFKVSGLLST 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + +NGR +++ + I Y I GRYP+ V+L+E+DP VDVNV Sbjct: 239 PETTRSNRNFVSILLNGRYIKNYQLTKAILAGYGSKIAQGRYPIAVILIELDPFLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I + I A+ + S++ + A + Sbjct: 299 HPTKEQVRLSKEKELSRLITEGISTALLENTSQVSALANLNKEVDRQDQLAFNLNKNVVD 358 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV----------------------- 396 T+ T +E+ +E ++S ++ D ED+ V Sbjct: 359 TTRTY-EEQPAKEEKQISDQEVSYVDLNQVREDDRYVLTASWDKNVAIQVSLTPFTKKAN 417 Query: 397 ----------EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 +E A C Q+ Y+++ D L ++DQ +A L + + + Sbjct: 418 KKEDNLLTKGDEKIAYSLPYLTYCGQVGA-YLLASNEDDLYLIDQVSAERALKYCDILKQ 476 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 T TLLTP ++D + I H +L +G+ E FG N++ + P L Sbjct: 477 MQETDYQQ-TLLTPLVLDFGSEDYLEIKNHLSELREIGLILEDFGQNSLLLPSYPLWLKD 535 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMAC---YGSIRSGRKMQSIEMNRLLRE 563 ++ +R+++D + + +D + I A++A +R K+ +L + Sbjct: 536 ESERN-IRELLDLFL-----TSKKDNLAGIKASLAKAEVKRRVRK-EKLTKEGAQSMLEQ 588 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + + G+ +K+ ++++ +F Sbjct: 589 LASLADPYYDPFGQLIIVKITDTELDHMFK 618 >gi|307150090|ref|YP_003885474.1| DNA mismatch repair protein MutL [Cyanothece sp. PCC 7822] gi|306980318|gb|ADN12199.1| DNA mismatch repair protein MutL [Cyanothece sp. PCC 7822] Length = 569 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 164/612 (26%), Positives = 272/612 (44%), Gaps = 71/612 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L +IN IAAGE+I+ ++EL+EN+LDA ++R+ + + Q+ DNG Sbjct: 1 MNIKSLPPDVINLIAAGEVIDSLGAVVRELVENALDAGATRIVISLYPD-LWWIQVADNG 59 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSR-PPQNNT 117 GM+ E++ H TSKI DD NI + GFRGEAL SI V+ L + SR ++ Sbjct: 60 RGMSLEDLKRCSNAHSTSKIRSRDDLWNITSLGFRGEALHSIAQVAILEVASRFTIGHDA 119 Query: 118 GAQIAISGEKISSVRPVAMNP-GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G ++ + + A GTIV V +LF +P R L + I +I +A Sbjct: 120 GWRVRYNAVGEAESLETAAIAPGTIVTVSNLFGNLPVRRKGLPPMTQQLKAIQTLIHHIA 179 Query: 177 IAYPKVSFTFSTIKSNRY-------------KMNFQSTNGNFPERISQVIGEDFINNAVE 223 + +P V++ N + ++ + + I V + Sbjct: 180 LCHPHVTWCLEQNDRNWFNISPGKSALQILPQLLKRVHQNDLHLLIQTVETPALNDLQTN 239 Query: 224 LNEKSNEITLQGYTGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYP 282 L E ++ G+P +R A+ V INGR V+ + +I TA+A T+P R+P Sbjct: 240 LPPMVEESKVELVIGLPDRCHRRRADWVKVAINGRMVRLPELEQSIFTAFARTLPRDRFP 299 Query: 283 VVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI 342 V + ++ P +D N HPAK+ I + + I QSI +A+ G S S Sbjct: 300 VCFVHVKTCPSHIDWNRHPAKTEIYLHSLAFWQEKIAQSIDEALKMNGDSLSD------- 352 Query: 343 SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 K + L ++EK + + D Sbjct: 353 ---------KASNHRVVKLLKASEEKSPYKVDPKPQTQTRHQDSIGL------------- 390 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 A AQ+ YI+++ ++GL +++QH AHER+++E+++ D+ + + +L Sbjct: 391 --LDLQAVAQVRNTYIVAEHSNGLWLIEQHIAHERVLYEQLQDDWKIVFLDTPIVLNQLT 448 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 E L RLG++ E FG A+R P +LSK+ +D + +I+ Sbjct: 449 SS-----------QVEQLQRLGLEIEPFGEALWAVRSAPEMLSKR------QDCSEALIE 491 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 S LQ +AT AC +IR+G + +M +L + ++ N C HGRP F+ Sbjct: 492 LSWGGDLQTAQ---VAT-ACRSAIRNGTTLSLAQMQSILDQWKRTRNPRTCPHGRPIFLS 547 Query: 583 LKLSDIEKLFGR 594 L+ + + + F R Sbjct: 548 LEETSLARFFRR 559 >gi|312875209|ref|ZP_07735222.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LEAF 2053A-b] gi|311089316|gb|EFQ47747.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LEAF 2053A-b] Length = 625 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 171/632 (27%), Positives = 291/632 (46%), Gaps = 52/632 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KLS ++ NQIAAGE+IERP+ IKEL EN+LDA S+R++ G + DNG Sbjct: 3 KIHKLSSELTNQIAAGEVIERPASVIKELCENALDAGSTRIKIDFIDAGLKQIVVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++EI +A RH TSKI+ D NI T GFRGEAL SI AV+ + +++ + G Sbjct: 63 GIAADEIDLAFMRHATSKINTNHDLFNIATLGFRGEALASIAAVAKVDIVTNT-GDVNGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A GT + V+DLF+ PARL +LKSE+ E I D++ R+A+ Y Sbjct: 122 HAIFEDSNKVKQEAIASPQGTKIVVKDLFYNTPARLKYLKSERTEIMKIVDIVNRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + + ++ + + + + + + G + + +S + + G Sbjct: 182 PQVSFELT---NRQKQLLKTTGHDDLRQTAANIYGIKVAEKMLAIYAQSPDFKIAGLISR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R N + +N R V++ ++ I Y + GRYP ++ +++DP VDVNV Sbjct: 239 ADDTRSTRNFITLLLNTRYVKNYRLVQAIVDGYGTRLLKGRYPFAIVKIDLDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------VLSKKMISSFHQDNA 350 HP K +R + + I+++I +A+ +S ++ + ++ Sbjct: 299 HPTKQEVRLSKESELARLIVRTIDQALGATEHEIASFDDATESKQTKLDQLEFNLNEAVV 358 Query: 351 PKTHLP-KYATSLTNTQEKLFLQEN--------------------------RLSTNDLLP 383 + +P +++ T + ++E+ + T Sbjct: 359 DTSRIPVEFSMPNDLTDDSSKIKEDDTTFVSLKHPRQDEHYLVTTTWDANVQAQTALSPF 418 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S SE E+ Q+H+ Y+++ + L IVDQ AA RL F+K+ Sbjct: 419 SASSLSSEVTTSSEQILVNKLPQLQCLGQMHE-YLLATADNDLYIVDQVAADNRLAFDKL 477 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + QTLL I+D + + + D +LG+ E FG + ++E P Sbjct: 478 LLQMQAENNYEQTLLDNIILDFSMIDFLKVQDKLADFKKLGLNLEEFGGRSFVLQEYPLW 537 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE---NILATMACYGSIRSGRKMQSIEMNRL 560 L + Q ++ +ID I+ + RIE I+AT + IR + + S+EM + Sbjct: 538 LENCDQLQ-IKAVIDLILAHINAPIDKIRIELAKKIVATK--H--IRR-KSLNSLEMVEM 591 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 L + + N G+ K+ +D+ KLF Sbjct: 592 LTSLSNSSNPYHDPFGKIIIAKISENDLRKLF 623 >gi|309803565|ref|ZP_07697657.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LactinV 11V1-d] gi|308164313|gb|EFO66568.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LactinV 11V1-d] Length = 625 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 173/632 (27%), Positives = 287/632 (45%), Gaps = 52/632 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KLS ++ NQIAAGE+IERP+ IKEL EN+LDA S+R++ G + DNG Sbjct: 3 KIHKLSSELTNQIAAGEVIERPASVIKELCENALDAGSTRIKIDFIDAGLKQIMVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++EI +A RH TSKI+ D NI T GFRGEAL SI AV+ + +++ + G Sbjct: 63 GIAADEIDLAFMRHATSKINTNHDLFNIATLGFRGEALASIAAVAKVDIVTNT-GDVNGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A GT + V+DLF+ PARL +LKSE+ E I D++ R+A+ Y Sbjct: 122 HAIFEDSNKVKQEAIASPQGTKIVVKDLFYNTPARLKYLKSERTEIMKIVDIVNRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + ++ + + + + + + G + + +S + + G Sbjct: 182 PQVSFELTNQQK---QLLKTTGHDDLRQTAANIYGIKVAEKMLAIYAQSPDFKIAGLISR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R N + +N R V++ ++ I Y + GRYP ++ +++DP VDVNV Sbjct: 239 ADDTRSTRNFITLLLNTRYVKNYRLVQAIVDGYGTRLLKGRYPFAIVKIDLDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISSFHQ---------- 347 HP K +R + + I+++I +A+ + I++ ++ + Q Sbjct: 299 HPTKQEVRLSKESELARLIVRTIDQALGATEHEIASFDDANESKQTKLDQLEFNLNEAVV 358 Query: 348 DNAPKTHLPKYATSLTNTQEKL------------------------FLQENRLSTNDLLP 383 D + LT+ K+ + + T Sbjct: 359 DTSRIPVEFSIPNDLTDDSSKVKEDDTTFVSLKHPRQDEHYLVTTTWDANVQAQTALSPF 418 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S SE E+ Q+H+ Y+++ + L IVDQ AA RL F+K+ Sbjct: 419 SASSLSSEVTTSSEQILVNKLPQLQCLGQMHE-YLLATADNDLYIVDQVAADNRLAFDKL 477 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + QTLL I+D + + + D +LG+ E FG + ++E P Sbjct: 478 LLQMQAENNYEQTLLDNIILDFSMIDFLKVQDKLADFKKLGLNLEEFGGRSFVLQEYPLW 537 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE---NILATMACYGSIRSGRKMQSIEMNRL 560 L + Q ++ +ID I+ + RIE I+AT + IR + + S+EM + Sbjct: 538 LENCDQIQ-IKAVIDLILAHINAPLDKIRIELAKKIVATK--H--IRR-KSLNSLEMVEM 591 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 L + + N G+ K+ +D+ KLF Sbjct: 592 LTSLSNSSNPYHDPFGKIIIAKISENDLRKLF 623 >gi|256821741|ref|YP_003145704.1| DNA mismatch repair protein MutL [Kangiella koreensis DSM 16069] gi|256795280|gb|ACV25936.1| DNA mismatch repair protein MutL [Kangiella koreensis DSM 16069] Length = 586 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 152/547 (27%), Positives = 277/547 (50%), Gaps = 11/547 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I KLS + NQIAAGE++ERP+ +KEL+EN++DA++ R++ I GG ++TDNG Sbjct: 1 MAIHKLSPLVANQIAAGEVVERPASVVKELLENAIDAKADRIQIDIERGGTRLIRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +E+ +A+ RH TSKI SDD I+T GFRGEAL SI +V+ L L SRP + G Sbjct: 61 EGISRDELELALARHATSKIEHSDDLKAIYTLGFRGEALASISSVAKLKLSSRPQAQDMG 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P ++ GTIVEVRDLFF PAR FL++E+ E I + ++R+A+ Sbjct: 121 WSAIAEGLDMQVKLQPQSLPAGTIVEVRDLFFNTPARQKFLRAERTEFVHIEETVKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P V+ T ++ + +RI ++G F+ A++L+ + L G+ Sbjct: 181 GSPHVAITLRHNSKVVKRVPAAHNSEQHQQRIGSILGASFLREAIKLDSTIDATRLYGWL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +++ ++ YVF+NGR V+D+ + IR AY + +P GR P VL LE++ QVDV Sbjct: 241 SPVDWHQSSSLGQYVFVNGRAVRDRTLNHAIRQAYHDRLPAGRMPAYVLYLELEASQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG----ISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF N + +F+ ++++A+ ++G ++ +V + + ++ Sbjct: 301 NVHPTKHEVRFSNGRQVHDFMSHAVEEALLEQGEMLELNQHAVGDNEELVYMRPSHSVAQ 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 K T + + R + ++ + + + Sbjct: 361 PTTKDDPYFTPRHKAGAFSQQRADHVADSSPAQYRPQQSCQWPQKPKVSSKLASGNSWVL 420 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H ++ QT +G+ +D A + I + + ++ ++ + +L P + + + Sbjct: 421 HDRLLLQQTEEGIKALDLKAYFCQHISDCLHSEWQQGEVKQRLMLFPLRLGIPADNVS-- 478 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 E + G + GP + +R++P+ + ++ Q L++++ S + D Sbjct: 479 DEFINQWQKAGFEMTLTGPKTLVVRKVPSCVLHIDLQQWLQEVV--YQAVSKNLSTADWQ 536 Query: 534 ENILATM 540 + ++ ++ Sbjct: 537 KQLMKSL 543 >gi|325911949|ref|ZP_08174352.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners UPII 143-D] gi|325476251|gb|EGC79414.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners UPII 143-D] Length = 625 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 173/632 (27%), Positives = 288/632 (45%), Gaps = 52/632 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KLS ++ NQIAAGE+IERP+ IKEL EN+LDA S+R++ G + DNG Sbjct: 3 KIHKLSSELTNQIAAGEVIERPASVIKELCENALDAGSTRIKIDFIDAGLKQIVVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++EI +A RH TSKI+ D NI T GFRGEAL SI AV+ + +++ + G Sbjct: 63 GIAADEIDLAFMRHATSKINTNHDLFNIATLGFRGEALASIAAVAKVDIVTNT-GDVNGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A GT + V+DLF+ PARL +LKSE+ E I D++ R+A+ Y Sbjct: 122 HAIFEDSNKVKQEAIASPQGTKIVVKDLFYNTPARLKYLKSERTEIMKIVDIVNRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + + ++ + + + + + + G + + +S + + G Sbjct: 182 PQVSFELT---NRQKQLLKTTGHDDLRQTAANIYGIKVAEKMLAIYAQSPDFKIAGLISR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R N + +N R V++ ++ I Y + GRYP ++ +++DP VDVNV Sbjct: 239 ADDTRSTRNFITLLLNTRYVKNYRLVQAIVDGYGTRLLKGRYPFAIVKIDLDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISSFHQ---------- 347 HP K +R + + I+++I +A+ + I++ ++ + Q Sbjct: 299 HPTKQEVRLSKESELARLIVRTIDQALGATEHEIASFDDATESKQTKLDQLEFNLNDAVV 358 Query: 348 DNAPKTHLPKYATSLTNTQEKL------------------------FLQENRLSTNDLLP 383 D + LT+ K+ + + T Sbjct: 359 DTSRTPVEFSIPNDLTDDSSKVKEDDTTFVSLKHPRQDEHYLVTTTWDANVQAQTALSPF 418 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S SE E+ Q+H+ Y+++ + L IVDQ AA RL F+K+ Sbjct: 419 SASSLSSEVTTSSEQILVNKLPQLQCLGQMHE-YLLATADNDLYIVDQVAADNRLAFDKL 477 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + QTLL I+D + + + D +LG+ E FG + ++E P Sbjct: 478 LLQMQAENNYEQTLLDNIILDFSMIDFLKVQDKLADFKKLGLNLEEFGGRSFVLQEYPLW 537 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE---NILATMACYGSIRSGRKMQSIEMNRL 560 L + Q ++ +ID I+ + RIE I+AT + IR + + S+EM + Sbjct: 538 LENCDQLQ-IKAVIDLILAHINAPLDKIRIELAKKIVATK--H--IRR-KSLNSLEMVEM 591 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 L + + N G+ K+ +D+ KLF Sbjct: 592 LTSLSNSSNPYHDPFGKIIIAKISENDLRKLF 623 >gi|315653063|ref|ZP_07905991.1| DNA mismatch repair protein HexB [Lactobacillus iners ATCC 55195] gi|315489598|gb|EFU79232.1| DNA mismatch repair protein HexB [Lactobacillus iners ATCC 55195] Length = 625 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 170/632 (26%), Positives = 282/632 (44%), Gaps = 52/632 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KLS ++ NQIAAGE+IERP+ IKEL EN+LDA S+R++ G + DNG Sbjct: 3 KIHKLSSELTNQIAAGEVIERPASVIKELCENALDAGSTRIKIDFIDAGLKQIMVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++EI +A RH TSKI+ D NI T GFRGEAL SI AV+ + +++ + G Sbjct: 63 GIAADEIDLAFMRHATSKINTNHDLFNIATLGFRGEALASIAAVAKVDIVTNT-GDVNGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A GT + V+DLF+ PARL +LKSE+ E I D++ R+A+ Y Sbjct: 122 HAIFEDSNKVKQEAIASPQGTKIVVKDLFYNTPARLKYLKSERTEIMKIVDIVNRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + + ++ + + + + + + G + + +S + + G Sbjct: 182 PQVSFELT---NRQKQLLKTTGHDDLRQTAANIYGIKVAEKMLAIYAQSPDFKIAGLISR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R N + +N R V++ ++ I Y + GRYP ++ +++DP VDVNV Sbjct: 239 ADDTRSTRNFITLLLNTRYVKNYRLVQAIVDGYGTRLLKGRYPFAIVKIDLDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-------------------- 339 HP K +R + + I+++I + + +S+ + Sbjct: 299 HPTKQEVRLSKESELARLIVRTIDQVLGATEHEIASLDNATESKQTKLDQLEFNLNEAVV 358 Query: 340 ----------------KMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 S +D+ L + + + T Sbjct: 359 DTSRIPVEFSMPNDLTDDSSKIKEDDTTFVSLKHPRQDEHYLVTTTWDENVQAQTALSPF 418 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S SE E+ Q+H+ Y+++ + L IVDQ AA RL F+K+ Sbjct: 419 SASQLSSEVTTSSEQILVNRLPQLQCLGQMHE-YLLATADNDLYIVDQVAADNRLAFDKL 477 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + QTLL I+D + + + D +LG+ E FG + ++E P Sbjct: 478 LLQMQAENNYEQTLLDNIILDFSMIDFLKVQDKLADFKKLGLNLEEFGGRSFVLQEYPLW 537 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE---NILATMACYGSIRSGRKMQSIEMNRL 560 L + Q ++ +ID I+ + RIE I+AT + IR + + S+EM + Sbjct: 538 LENCDQIQ-IKAVIDLILAHINAPLDKIRIELAKKIVATK--H--IRR-KSLNSLEMVEM 591 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 L + + N G+ K+ +D+ KLF Sbjct: 592 LTSLSNSSNPYHDPFGKIIIAKISENDLRKLF 623 >gi|325913762|ref|ZP_08176123.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners UPII 60-B] gi|325476962|gb|EGC80113.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners UPII 60-B] Length = 625 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 172/632 (27%), Positives = 288/632 (45%), Gaps = 52/632 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KLS K+ NQIAAGE+IERP+ IKEL EN+LDA S+R++ G + DNG Sbjct: 3 KIHKLSSKLTNQIAAGEVIERPASVIKELCENALDAGSTRIKIDFIDAGLKQIVVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++EI +A RH TSKI+ D NI T GFRGEAL SI AV+ + +++ + G Sbjct: 63 GIAADEIDLAFMRHATSKINTNHDLFNIATLGFRGEALASIAAVAKVDIVTNT-GDVNGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A GT + V+DLF+ PARL +LKSE+ E I D++ R+A+ Y Sbjct: 122 HAIFEDSNKVKQEAIASPQGTKIVVKDLFYNTPARLKYLKSERTEIMKIVDIVNRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + + ++ + + + + + + G + + +S + + G Sbjct: 182 PQVSFELT---NRQKQLLKTTGHDDLRQTAANIYGIKVAEKMLAIYAQSPDFKIAGLISR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R N + +N R V++ ++ I Y + GRYP ++ +++DP VDVNV Sbjct: 239 ADDTRSTRNFITLLLNTRYVKNYRLVQAIVDGYGTRLLKGRYPFAIVKIDLDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------VLSKKMISSFHQDNA 350 HP K +R + + I+++I + + +S ++ + ++ Sbjct: 299 HPTKQEVRLSKESELARLIVRTIDQVLGATEHEIASLDNATESKQTKLDQLEFNLNEAVV 358 Query: 351 PKTHLP---KYATSLTNTQEKL------------------------FLQENRLSTNDLLP 383 + +P LT+ K+ + + + T Sbjct: 359 DTSRIPVEFSIPNDLTDDSSKVKEDDTTFVSLKHPRQDEHYLVTTTWDENVQAQTALSPF 418 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S SE E+ Q+H+ Y+++ + L IVDQ AA RL F+K+ Sbjct: 419 SASQLSSEVTTSSEQILVNRLPQLQCLGQMHE-YLLATADNDLYIVDQVAADNRLAFDKL 477 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + QTLL I+D + + + D +LG+ E FG + ++E P Sbjct: 478 LLQMQAENNYEQTLLDNIILDFSMIDFLKVQDKLADFKKLGLNLEEFGGRSFVLQEYPLW 537 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE---NILATMACYGSIRSGRKMQSIEMNRL 560 L + Q ++ +ID I+ + RIE I+AT + IR + + S+EM + Sbjct: 538 LENCDQLQ-IKAVIDLILAHINAPIDKIRIELAKKIVATK--H--IRR-KSLNSLEMVEM 591 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 L + + N G+ K+ +D+ KLF Sbjct: 592 LTSLSNSSNPYHDPFGKIIIAKISENDLRKLF 623 >gi|313885802|ref|ZP_07819545.1| DNA mismatch repair protein, C-terminal domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|312924706|gb|EFR35472.1| DNA mismatch repair protein, C-terminal domain protein [Porphyromonas asaccharolytica PR426713P-I] Length = 646 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 143/648 (22%), Positives = 274/648 (42%), Gaps = 64/648 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RP+ +KEL+ENS+DA ++++ + GK ++ D+G G Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASMLKELVENSIDAHATQITIELQDAGKELMRVIDDGVG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKIS DD + + GFRGEAL SI AV+ + L++R ++ G + Sbjct: 65 MSPLDARMAFERHATSKISSVDDLFTLRSMGFRGEALASIVAVAQIELVTRQADSDIGYK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G ++ S P GT + V++LF+ +PAR FLK + E I R+A+ YP Sbjct: 125 LLINGSEVISSSPTVAEVGTSITVKNLFYNVPARRRFLKGSETELRHIYRQFERIALVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++FT + + + RI ++G+ + + + + + G+ +P Sbjct: 185 EIAFTLYSEGKLIRNLP----KSDLQHRIVDLLGKSYSKQLIPIEYQGPLANVSGFITLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + Q + F+NGR ++ + + + + I G P + ++DP ++DVN+H Sbjct: 241 RDAKRRGAQQFFFVNGRYMKHPYFHRAVMNVFEDLIAPGSQPNYFIYFQVDPSRIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ------------- 347 P K+ I+F + I ++ +++ ++ + S + Sbjct: 301 PTKTEIKFLDEQAIFKLLMVVLREHLSTTSAMPAITFSTDQLIEIPAYDATRQSSSTLQP 360 Query: 348 ------------------DNAPKTHLPKYATSLTNTQEKLFLQ------ENRLSTNDLLP 383 D P L ++ E E+ LST+ Sbjct: 361 PPVQIDPEYNPFKAISTDDQRPLDPLSSMSSGSPAHWENFIDDFQQRRGESTLSTSQPSG 420 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + S + Y+ + +D L ++ A R+ +E+ Sbjct: 421 AAPTAIDPLFTVSPSSPQPAANSTNLVYTFQERYLFTTMSDRLAVIQIDRALLRIYYEQQ 480 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER-------FGPNAIA 496 +Q LL E + L + E E L ++G + N Sbjct: 481 IATLTLEPDQAQPLLFAEELSLPSEIYPMHHELVESLRQIGFEITPQEEASTGTDENVYL 540 Query: 497 IREIPAILSKKNIPQLLR----DIIDEI--IDSSTTYTLQDRIENI-LATMACYGS---I 546 I +P L + ++ + +D++ +++T T +++ + L++ A + + Sbjct: 541 ITSVPKPLRPIGVADMITQTLGEYLDQLEREETNTELTQAEQLAQLFLSSEALRQASELV 600 Query: 547 RSGRKMQSIEMN--RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 R + + +++ ++ PNS GR + L +I+K F Sbjct: 601 R--HTLHARAAQPSQIISDLFLTPNSQFDPLGRSIMVSLTSEEIDKWF 646 >gi|325577874|ref|ZP_08148107.1| DNA mismatch repair protein MutL [Haemophilus parainfluenzae ATCC 33392] gi|325160304|gb|EGC72431.1| DNA mismatch repair protein MutL [Haemophilus parainfluenzae ATCC 33392] Length = 615 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 169/578 (29%), Positives = 286/578 (49%), Gaps = 47/578 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA ++++ I GG S +I DNG Sbjct: 1 MAIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIHIDIENGGASLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+D D I + GFRGEAL SI +VS LTL SR + N Sbjct: 61 SGIPKEELRLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTAEQNEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G ++ ++ +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGREMETIIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A ++FT + + + +R++ + G+DF+ +A+ ++ K +++ L G+ Sbjct: 181 AKFNIAFTLTHNGKIVRQYRPAANEEQQLKRVATICGDDFVQHALRIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F R + Y +INGR V+DK I IR AYAE + +YP VL ++++P VDV Sbjct: 241 ATPEFTRSQNDLSYCYINGRMVRDKVITHAIRQAYAEHLHTEQYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAIN-----KKGISTSSVLSKKMISSFHQDNAPK 352 NVHP K +RF +I +FI Q + A+N + + + +++ +S+ K Sbjct: 301 NVHPTKHEVRFHQARLIHDFICQGVTNALNAIPQAELDLMPAMNEAREPSASYQPHYETK 360 Query: 353 THLPKYATSLTNT---QEKLFLQENRLS-TNDLLPSDDPTYSEDNDPVEE---------- 398 + ++ + Q + ENR +N Y E +E+ Sbjct: 361 PNRAAAGQNIFASHYNQPREKQSENRPHFSNRSEFVPSYGYREQPTKIEQRLYGELVRPT 420 Query: 399 ---------------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + ++ A A I ++ Q ++ A + L +E Sbjct: 421 EASQVLTTPVVEQQLPQTSNAGYLRALALIENKALLLQQNQQFYLMSL-AKLQTLNYE-- 477 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK-AERFGPNAIAIREIPA 502 +I+ Q LL P I L E + + + G + E + + ++PA Sbjct: 478 -LTLQQGEISQQPLLIPIIFRLDEKQFEQWQKQKAYFQQSGFEFIENEAQLRLTLNKVPA 536 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 IL +N+ + + ++ E +++ + D + + T+ Sbjct: 537 ILRTQNLQKCVVSLLAEHLEN-----MPDFLTALCHTL 569 >gi|225848265|ref|YP_002728428.1| DNA mismatch repair protein MutL [Sulfurihydrogenibium azorense Az-Fu1] gi|225644077|gb|ACN99127.1| DNA mismatch repair protein MutL [Sulfurihydrogenibium azorense Az-Fu1] Length = 517 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 177/596 (29%), Positives = 274/596 (45%), Gaps = 82/596 (13%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKIR L ++++N+IAAGE++ERPS +KELIENSLD +S +E I GK + DNG Sbjct: 1 MKIRPLPDEVVNKIAAGEVVERPSSVLKELIENSLDTSASLIEVSIEKAGKRLISVFDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ AV+RH TSKI +D +I T+GFRGEAL SI +VS LT+ SR + G Sbjct: 61 EGIEKQDLINAVKRHYTSKIKALEDLYSIITYGFRGEALSSISSVSRLTITSRTKNDLHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +Q+++ G KI S V GT VEV+DLFF + AR FLKSE E V AIA Sbjct: 121 SQLSLEGGKILSFSEVGCPVGTKVEVKDLFFNVLAREKFLKSENTENIHNVSVFLNYAIA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P F S Y + + ER++ + G+DF+ N + ++ + G+ Sbjct: 181 NPDKHFKLSIDSKQVYNLYP----SSLKERLTLIYGKDFVENLKYVEYENYLGKVYGFVS 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + + + ++FIN R V+ FI S ++ + +L ++ P VDVN Sbjct: 237 LDSVKNKKS---HIFINKRPVKSPFISSIMKKKIGDN-------FFILFFDLPPYFVDVN 286 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK ++F+ +I + I ++ +N+ T S K S +Q K + Sbjct: 287 VHPAKIEVKFQKEKVIVDMIESLLKDNLNEFKAFTVSYQELKQPKSTYQTKEGKFEI--- 343 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 ED V S++ Y + A Y Sbjct: 344 ----------------------------IGQIEDTFIVAYSDSYVYFIDQHVANERVMYE 375 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 I + Q S KI SQ LL+P +DL + ++ E ++ Sbjct: 376 II----------------------LSQLKESKKIPSQRLLSPFKLDLSPKQEFILKEIND 413 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L LG K E N I IP + + L +I++ D + E + + Sbjct: 414 TLETLGFKVE----NNYLI-SIPYNMQISKAVETLYEIVESYPDITH--------EKVAS 460 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++C SI +G ++ + L++ K N + C HGRP + K+ + +I+K GR Sbjct: 461 SLSCRMSITAGDRLTLEKAQELIKNWIKTENPNVCPHGRPIYYKISIDEIKKAVGR 516 >gi|309806010|ref|ZP_07700036.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LactinV 03V1-b] gi|308167613|gb|EFO69766.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LactinV 03V1-b] Length = 625 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 173/632 (27%), Positives = 289/632 (45%), Gaps = 52/632 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KLS ++ NQIAAGE+IERP+ IKEL EN+LDA S+R++ G + DNG Sbjct: 3 KIHKLSSELTNQIAAGEVIERPASVIKELCENALDAGSTRIKIDFIDAGLKQIMVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++EI +A RH TSKI+ D NI T GFRGEAL SI AV+ + +++ + G Sbjct: 63 GIAADEIDLAFMRHATSKINTNHDLFNIATLGFRGEALASIAAVAKVDIVTNT-GDVNGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A GT + V+DLF+ PARL +LKSE+ E I D++ R+A+ Y Sbjct: 122 HAIFEDSNKVKQEAIASPQGTKIVVKDLFYNTPARLKYLKSERTEIMKIVDIVNRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + + ++ + + + + + + G + + +S + + G Sbjct: 182 PQVSFELT---NRQKQLLKTTGHDDLRQTAANIYGIKVAEKMLAIYAQSPDFKIAGLISR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R N + +N R V++ ++ +I Y + GRYP ++ +++DP VDVNV Sbjct: 239 ADDTRSTRNFITLLLNTRYVKNYRLVQSIVDGYGTRLLKGRYPFAIVKIDLDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISSFHQ---------- 347 HP K +R + + I+++I +A+ + I++ ++ + Q Sbjct: 299 HPTKQEVRLSKESELARLIVRTIDQALGATEHEIASFDDATESKQTKLDQLEFNLNEAVV 358 Query: 348 DNAPKTHLPKYATSLTNTQEKL------------------------FLQENRLSTNDLLP 383 D + LT+ K+ + + T Sbjct: 359 DTSRIPVEFSIPNDLTDDSSKVKEDDTTFVSLKHPRQDEHYLVTTTWDANVQAQTALSPF 418 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S SE E+ Q+H+ Y+++ + L IVDQ AA RL F+K+ Sbjct: 419 SASSLSSEVTTSSEQILVNKLPQLQCLGQMHE-YLLATADNDLYIVDQVAADNRLAFDKL 477 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + QTLL I+D + + + D +LG+ E FG + ++E P Sbjct: 478 LLQMQAENNYEQTLLDNIILDFSMIDFLKVQDKLADFKKLGLNLEEFGGRSFVLQEYPLW 537 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE---NILATMACYGSIRSGRKMQSIEMNRL 560 L + Q ++ +ID I+ + RIE I+AT + IR + + S+EM + Sbjct: 538 LENCDQIQ-IKAVIDLILAHINAPLDKIRIELAKKIVATK--H--IRR-KSLNSLEMVEM 591 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 L + + N G+ K+ +D+ KLF Sbjct: 592 LTSLSNSSNPYHDPFGKIIIAKISENDLRKLF 623 >gi|167856013|ref|ZP_02478758.1| DNA mismatch repair protein [Haemophilus parasuis 29755] gi|167852852|gb|EDS24121.1| DNA mismatch repair protein [Haemophilus parasuis 29755] Length = 638 Score = 399 bits (1024), Expect = e-108, Method: Composition-based stats. Identities = 154/549 (28%), Positives = 272/549 (49%), Gaps = 32/549 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG +I DNG G Sbjct: 33 IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATQIQIDIEKGGSQLIRIRDNGCG 92 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A+ RH TSKI+ +D +I + GFRGEAL SI +VS LTL SRP Q Sbjct: 93 IGKQDLALALARHATSKIATLEDLESILSLGFRGEALASISSVSRLTLTSRPEYQAEAWQ 152 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G ++ ++P + GT +EV +LFF PAR FL++++ E I +V+RR+A+A Sbjct: 153 AYAQGREMEVEIKPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFAHIDEVVRRIALAK 212 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P V+FT + + +T +R++ + G++FI +V ++ + +++ + G+ Sbjct: 213 PNVTFTLTHNEKKVRYYKAVATQQLEQQQKRVATICGDEFIQQSVHIDWQHDDLHIYGWV 272 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P+ R + Y ++NGR ++DK I IR AY E +P YPV VL L++DP VDV Sbjct: 273 GSPSLARVQNDLCYSYVNGRMMRDKTINHAIRQAYGERLPKDHYPVFVLFLDLDPSHVDV 332 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF------------ 345 NVHPAK +RF ++ +FI Q + A+ + + + + ++ Sbjct: 333 NVHPAKHEVRFHQSRLVHDFIYQGVLNALEDQHHLPLTTNVSEALPNYIADTNRVASGQN 392 Query: 346 -----HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE-- 398 +++ + S +NT+ + + +LL + + ++PV++ Sbjct: 393 IFAHSYREPRSTSSTHAERQSYSNTRSSGVSKNEQKWYGELLSTSPMQDYKRSEPVQDLP 452 Query: 399 -----SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 + ++ Q + + +++ K Sbjct: 453 KTAKITPLVEPIAEPVTPYAQALAVVKQKALLMKQGETFYLLSLEKLAQLKLQAELAKRE 512 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER---FGPNAIAIREIPAILSKKNIP 510 +Q LL P + L E + A + L LG + G + I+++P L ++N+ Sbjct: 513 NQALLIPLSLTLDEQQTASWQQSQTALADLGFDIQTKQWQGQTRLTIQKVPTCLREQNLQ 572 Query: 511 QLLRDIIDE 519 QLL + ++ Sbjct: 573 QLLFSLFNQ 581 >gi|312872850|ref|ZP_07732912.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LEAF 2062A-h1] gi|311091584|gb|EFQ49966.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LEAF 2062A-h1] Length = 625 Score = 398 bits (1023), Expect = e-108, Method: Composition-based stats. Identities = 172/632 (27%), Positives = 288/632 (45%), Gaps = 52/632 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KLS K+ NQIAAGE+IERP+ IKEL EN+LDA S+R++ G + DNG Sbjct: 3 KIHKLSSKLTNQIAAGEVIERPASVIKELCENALDAGSTRIKIDFIDAGLKQIVVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++EI +A RH TSKI+ D NI T GFRGEAL SI AV+ + +++ G Sbjct: 63 GIAADEIDLAFMRHATSKINTNHDLFNIATLGFRGEALASIAAVAKVDIVTNT-GGVNGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A GT + VRDLF+ PARL +LKSE+ E I D++ R+A+ Y Sbjct: 122 HAIFEDGNKVKQEAIASPQGTKIVVRDLFYNTPARLKYLKSERTEIMKIVDIVNRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + ++ + + + + + + G + + +S + + G Sbjct: 182 PQVSFELTNQQK---QLLKTTGHDDLRQTAANIYGIKVAEKMLAIYAQSPDFKIAGLISR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R N + +N R V++ ++ I Y + GRYP ++ +++DP VDVNV Sbjct: 239 ADETRSTRNFITLLLNTRYVKNYRLVQAIVDGYGTRLLKGRYPFAIVKIDLDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------VLSKKMISSFHQDNA 350 HP K +R + + I+++I + + +S ++ + ++ Sbjct: 299 HPTKQEVRLSKESELARLIVRTIDQVLGATEHEIASLDNATESKQTKLDQLEFNLNEAVV 358 Query: 351 PKTHLP-KYATSLTNTQEKLFLQEN--------------------------RLSTNDLLP 383 + +P +++ T + ++E+ + T Sbjct: 359 DTSRIPVEFSMPNDLTDDSSKVKEDDTTFVSLKHPRQDEHYLVTTTWDENVQAQTALSPF 418 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S SE E+ Q+H+ Y+++ + L IVDQ AA RL F+K+ Sbjct: 419 SASQLSSEVTTSSEQILVNRLPQLQCLGQMHE-YLLATADNDLYIVDQVAADNRLAFDKL 477 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + QTLL I+D + + + D +LG+ E FG + ++E P Sbjct: 478 LLQMQAENNYEQTLLDNIILDFSMIDFLKVQDKLADFKKLGLNLEEFGGRSFVLQEYPLW 537 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE---NILATMACYGSIRSGRKMQSIEMNRL 560 L + Q ++ +ID I+ + RIE I+AT + IR + + S+EM + Sbjct: 538 LENCDQLQ-IKAVIDLILAHINAPIDKIRIELAKKIVATK--H--IRR-KSLNSLEMVEM 591 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 L + + N G+ K+ +D+ KLF Sbjct: 592 LTSLSNSSNPYHDPFGKIIIAKISENDLRKLF 623 >gi|209696185|ref|YP_002264115.1| DNA mismatch repair protein [Aliivibrio salmonicida LFI1238] gi|238058930|sp|B6EMQ9|MUTL_ALISL RecName: Full=DNA mismatch repair protein mutL gi|208010138|emb|CAQ80463.1| DNA mismatch repair protein MutL [Aliivibrio salmonicida LFI1238] Length = 652 Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats. Identities = 161/634 (25%), Positives = 282/634 (44%), Gaps = 77/634 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENS+DA ++R++ I GG +I DNG Sbjct: 1 MPIQILPARLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIEKGGSKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIPKEELTLALSRHATSKITTLDDLEAIVSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT ++V DLFF PAR FL++++ E I ++++R+A+ Sbjct: 121 WSAHAEGRDMEVKLKPAAHPVGTTIDVVDLFFNTPARRKFLRTDKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + ++ + + T +R++ V G F+ +A+E+ + ++ G+ Sbjct: 181 SRLDITINLRHNGKSVRQYRAAQTKMQVEKRLAAVCGASFLQHALEVELEHGDLIFHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R + Y ++NGR ++DK I IR Y ++ +Y +L +EI+P VDV Sbjct: 241 SSPEGARAQGDVQYCYVNGRMMKDKLINHAIRQGYESSLSTNQYAAYILFIEINPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST------------------------ 333 NVHPAK +RF ++ +FI Q+I A+ + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAIYGALQQAASLPEVTTTSDIEMDRESYFPPMKDYVR 360 Query: 334 -----------------------SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLF 370 ++ SS + K +PK S +Q +L Sbjct: 361 QSSLPLTDAHIENKSKQLKEAIEATPSYPNKASSDEWVSKAKPSMPKAYQSEKPSQRELN 420 Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL---------------GIACAQIHQ 415 ++ L+T D + + SEA H + G + + + Sbjct: 421 NYQHLLTTRDREDKTSNFEVNEVRIPKISEAKHNTVVVPQLKSAVSTSMLLGKVLSVVDK 480 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 + + Q + L +VD A + ++ + + +Q LL P I + + C + E Sbjct: 481 VFGLLQLGNQLQLVDLRYAEFIKSYGQLNSAHHEV-LKAQPLLIPLSIGIDKDICNKLTE 539 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT--YTLQDRI 533 + L +LGI + ++ + + + ++N+ QL+ +++ I + + + Sbjct: 540 YQGILKQLGIDLKVKNNESLIVMAVCQPIRQQNLQQLIPNLLRYIYQINPSLDQVISWLS 599 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 + ACY S + +L+ E+E+ Sbjct: 600 HQVQHDEACYSS---------AQAIQLVMELEQL 624 >gi|309809694|ref|ZP_07703550.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners SPIN 2503V10-D] gi|308170054|gb|EFO72091.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners SPIN 2503V10-D] Length = 625 Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats. Identities = 168/629 (26%), Positives = 286/629 (45%), Gaps = 46/629 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KLS ++ NQIAAGE+IERP+ IKEL EN+LDA S+R++ G + DNG Sbjct: 3 KIHKLSSELTNQIAAGEVIERPASVIKELCENALDAGSTRIKIDFIDAGLKQIVVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++EI +A RH TSKI+ D NI T GFRGEAL SI AV+ + +++ + G Sbjct: 63 GIAADEIDLAFMRHATSKINTNHDLFNIATLGFRGEALASIAAVAKVDIVTNT-GDVNGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A GT + V+DLF+ PARL +LKSE+ E I D++ R+A+ Y Sbjct: 122 HAIFEDSNKVKQEAIASPQGTKIVVKDLFYNTPARLKYLKSERTEIMKIVDIVNRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + ++ + + + + + + G + + +S + + G Sbjct: 182 PQVSFELTNQQK---QLLKTTGHDDLRQTAANIYGIKVAEKMLAIYAQSPDFKIAGLISR 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R N + +N R V++ ++ I Y + GRYP ++ +++DP VDVNV Sbjct: 239 ADETRSTRNFITLLLNTRYVKNYRLVQAIVDGYGTRLLKGRYPFAIVKIDLDPLLVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------VLSKKMISSFHQDNA 350 HP K +R + + I+++I + + +S ++ + ++ Sbjct: 299 HPTKQEVRLSKESELARLIVRTIDQVLGATEHEIASLDNATESKQTKLDQLEFNLNEAVV 358 Query: 351 PKTHLP-KYATSLTNTQEKLFLQEN--------------------------RLSTNDLLP 383 + +P +++ T + ++E+ + T Sbjct: 359 DTSRIPVEFSMPNDLTDDSSKVKEDDTTFVSLKHPRQDEHYLVTTTWDANVQAQTALSPF 418 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S SE E+ Q+H+ Y+++ + L IVDQ AA RL F+K+ Sbjct: 419 SASSLSSEVTTSSEQILVNKLPQLQCLGQMHE-YLLATADNDLYIVDQVAADNRLAFDKL 477 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + QTLL I+D + + + D +LG+ E FG + ++E P Sbjct: 478 LLQMQAENNYEQTLLDNIILDFSMIDFLKVQDKLADFKKLGLNLEEFGGRSFVLQEYPLW 537 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 L + Q ++ +ID I+ + RIE +A IR + + S+EM +L Sbjct: 538 LENCDQIQ-IKAVIDLILAHINAPLDKIRIELAKKNVATKH-IRR-KSLNSLEMVEMLTS 594 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 + + N G+ K+ +D+ KLF Sbjct: 595 LSNSSNPYHDPFGKIIIAKISENDLRKLF 623 >gi|332300228|ref|YP_004442149.1| DNA mismatch repair protein mutL [Porphyromonas asaccharolytica DSM 20707] gi|332177291|gb|AEE12981.1| DNA mismatch repair protein mutL [Porphyromonas asaccharolytica DSM 20707] Length = 646 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 141/648 (21%), Positives = 272/648 (41%), Gaps = 64/648 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + I NQIAAGE+I+RP+ +KEL+EN++DA ++++ + GK ++ D+G G Sbjct: 5 IHLLPDSIANQIAAGEVIQRPASMLKELVENAIDAHATQITIELQDAGKELMRVIDDGVG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKIS DD + + GFRGEAL SI AV+ + L++R ++ G + Sbjct: 65 MSPLDARMAFERHATSKISSVDDLFTLRSMGFRGEALASIVAVAQIELVTRQVDSDIGYK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I+G ++ S P GT + V++LF+ +PAR FLK + E I R+A+ YP Sbjct: 125 LLINGSEVISSSPTVAEVGTSITVKNLFYNVPARRRFLKGSETELRHIYRQFERIALVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++FT + + + RI ++G+ + + + + + G+ +P Sbjct: 185 EIAFTLYSEGKLIRNLP----KSDLQHRIVDLLGKSYSKQLIPIEYQGPLANVSGFITLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + Q + F+NGR ++ + + + + I G P + ++DP ++DVN+H Sbjct: 241 RDAKRRGAQQFFFVNGRYMKHPYFHRAVMNVFEDLIAPGSQPNYFIYFQVDPSRIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ------------- 347 P K+ I+F + I ++ +++ ++ + S + Sbjct: 301 PTKTEIKFLDEQAIFKLLMVVLREHLSTTSAMPAITFSTDQLIEIPAYDATRQSSSTLQP 360 Query: 348 ------------------DNAPKTHLPKYATSLTNTQEKLFLQ------ENRLSTNDLLP 383 D P L ++ E E+ LST+ Sbjct: 361 PPVQIDPEYNPFKAISTDDQRPLDPLSSMSSGSPAHWENFIDDFQQRRGESTLSTSQPTG 420 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + S + Y+ + +D L ++ A R+ +E+ Sbjct: 421 AAPTAIDPLFTVSPSSPQPAANSTNLVYTFQERYLFTTMSDRLAVIQIDRALLRIYYEQQ 480 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER-------FGPNAIA 496 +Q LL E + L + E E L ++G + N Sbjct: 481 IATLTLEPDQAQPLLFAEELSLPSEIYPMHHELVESLRQIGFEITPQEEASAGTDENVYL 540 Query: 497 IREIPAILSKKNIPQLLR----DIIDEI--IDSSTTYTLQDRIENI-LATMACYGS---I 546 I +P L + ++ + +D++ ++ T + ++ + L++ A + + Sbjct: 541 ITSVPKPLRPIGVADMITQTLGEYLDQLEREETDTELSQATQLAQLFLSSEALRQASELV 600 Query: 547 RSGRKMQSIEMN--RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 R + + +++ ++ PNS GR + L +I+K F Sbjct: 601 R--HTLHARAAQPSQIISDLFLTPNSQFDPLGRSIMVSLTSEEIDKWF 646 >gi|15602769|ref|NP_245841.1| DNA mismatch repair protein [Pasteurella multocida subsp. multocida str. Pm70] gi|13431695|sp|P57886|MUTL_PASMU RecName: Full=DNA mismatch repair protein mutL gi|12721220|gb|AAK02988.1| MutL [Pasteurella multocida subsp. multocida str. Pm70] Length = 617 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 167/559 (29%), Positives = 276/559 (49%), Gaps = 36/559 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG + +I DNG Sbjct: 1 MAIKVLSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIENGGSTLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD NI + GFRGEAL SI +VS LTL SRP N Sbjct: 61 IGIAKDELSLALARHATSKIASLDDLDNILSLGFRGEALASISSVSRLTLTSRPATQNEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G ++ + +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGREMETTLQPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A +SFT + + +R++ + G++F+ NA+E++ K +++ L G+ Sbjct: 181 AKMAISFTLTHNGKIVRQYRSAHDRTQKLKRVAAICGDEFVQNALEIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 PTF+R + Y +INGR V+DK I IR AYA+ + +YP VL ++++P VDV Sbjct: 241 AQPTFSRTQNDLSYCYINGRMVRDKIITHAIRQAYADFLSPEQYPAFVLFIDLNPNDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS------TSSVLSKKMISSFHQDNAP 351 NVHP K +RF ++ +FI Q I A++ + S + ++ S + P Sbjct: 301 NVHPTKHEVRFHQQRLVHDFICQGISNALHSEQASLYQTNEACVSANYQVEESAQHEYRP 360 Query: 352 KTHLPKYAT-------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 P A S T T Q N+ +T + + E++ + Sbjct: 361 SYSKPNRAAAGQNIFDSSTTTPSTALFQTNKKNTQNRPHFSTNIPATRISKTEQAAYSAL 420 Query: 405 QLGIACAQIHQNYI-------ISQTTDGLVIVDQHA------------AHERLIFEKMRQ 445 A + L +V+ A + ++L K+ Sbjct: 421 LSNSEMATVLPQEDGALLERKTPSILKALALVENKALLLQQQQQFYLLSLQQLQRLKIEL 480 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-ERFGPNAIAIREIPAIL 504 + Q LL P + L + + ++G + E G I + +P+ L Sbjct: 481 SLQRDPVLQQPLLIPIVFRLNPQQLTYWQQQKTFFTQIGFEFHENLGQQRITLNRVPSCL 540 Query: 505 SKKNIPQLLRDIIDEIIDS 523 ++N+ + + ++ + +D+ Sbjct: 541 RQQNLQKCIIVLLSQPLDT 559 >gi|282859618|ref|ZP_06268721.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella bivia JCVIHMP010] gi|282587621|gb|EFB92823.1| DNA mismatch repair protein, C-terminal domain protein [Prevotella bivia JCVIHMP010] Length = 581 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 151/580 (26%), Positives = 267/580 (46%), Gaps = 62/580 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+I+RP+ IKELIENS+DA ++ ++ ++ G++ Q+ DNG G Sbjct: 5 IQLLPDSVANQIAAGEVIQRPASVIKELIENSVDAGATIIKVLVVDAGRTSIQVVDNGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + ++ +RH TSKI DD ++HT GFRGEAL SI AV+ + L +R + G Sbjct: 65 MSEIDARLSFERHATSKIRKADDLFSLHTMGFRGEALASIAAVAQVELKTRIEGDELGCH 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++ISG P G+ + +LFF +PAR FLKS E N I +R+A+ YP Sbjct: 125 LSISGGSFVGQEPCQCAVGSNFLIENLFFNVPARRKFLKSNTTELNNIITAFQRIALVYP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++FT + + + ++ S F +RI ++ G+ + + + ++ + G+ G P Sbjct: 185 SITFTLHSNDTEMFNLHACS----FKQRIVEIFGKRLSHELLPVEVETTLCNIHGFVGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 ++ Y+F+N R ++ + I +AY IP G + + +DVN+H Sbjct: 241 ESSKKKGAHQYLFVNDRYMKHPYFHKAIMSAYERLIPQGEQVSYFIYFNVPAEDIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS---KKMISSFHQDNAPKTHLPK 357 P K+ I+F N I ++ +++ AI K ++ + I F +N Sbjct: 301 PTKTEIKFENEQAIWQILMAAVRDAIGKFHDVSAIDFDTEGRPDIPVFDPENEASAPKMD 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED------------------------- 392 + + +E FL+ S+N + S Sbjct: 361 FNPNFNPFKESSFLEGGSQSSNTTFAATQGKTSSKSYTSRADFSKVSSDNWEELYAGSLL 420 Query: 393 ----------------------------NDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 + +E+ A + + Q YI++ Sbjct: 421 ANDKNEEGEACLLPSLGFKHEDEGVLIASKMSDEAAAIIEEKSPSHYQYKGRYIMTAVKS 480 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL+I+DQH AH R+++E+ + F K +Q +L PE++ L E ++ + ++ +G Sbjct: 481 GLMIIDQHRAHVRILYEQYLKQFAEHKGHTQKMLFPEVVHLTATELTVLEKISIEMQEIG 540 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 + + G + AI +PA L NI L++++I + Sbjct: 541 FQLDDLGGGSFAINGVPAGLEGLNIINLVQEMISTAHEKG 580 >gi|254796959|ref|YP_003081796.1| DNA mismatch repair protein, MutL/HexB family [Neorickettsia risticii str. Illinois] gi|254590166|gb|ACT69528.1| DNA mismatch repair protein, MutL/HexB family [Neorickettsia risticii str. Illinois] Length = 651 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 176/661 (26%), Positives = 316/661 (47%), Gaps = 78/661 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI+ L +IIN+IAAGEI+E+P+ A+KEL+EN++DA S+ ++ + G++ ++TDNG Sbjct: 1 MKIQVLPTEIINKIAAGEILEKPANAVKELVENAIDASSTSIKIELEEAGRNLIRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ +A+++H TSK++ D +I+ GFRGEAL SI S + + S Sbjct: 61 VGISIEDLHLAIEKHATSKLNTKDLYDINYLGFRGEALHSIAITSEMKIASCFNGEG--- 117 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + ++P + GT+VEVR LF IP +L FL+SE+ E + I +++ ++A+ Sbjct: 118 --YIIDAQTKEIKPHHIKCGTVVEVRKLFHNIPNKLRFLRSEKTELSSIIELLNKLALVN 175 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + + + + +V+G++F+ N + + ++ I+ + + G+ Sbjct: 176 PNIAFELLSNGRQVFDYQTTTQLKRMEQL--KVLGKEFVENMIHMKHTNDCISGELFLGL 233 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT N +F+NGR V+D I S +R AY + IP YP+ V+ + + ++VDVN+ Sbjct: 234 PTLT-QKRNNCLIFVNGRPVKDSVISSVMRHAYNDYIPKNTYPIAVVFIRVQNKEVDVNI 292 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT------ 353 HP KS ++FR+P +IR F++ K++++ G +TS+ ++ + F+Q ++ Sbjct: 293 HPNKSEVKFRDPQVIRKFLLSVTSKSLSQCGHTTSTTVASHAVERFNQLLEKQSTFREET 352 Query: 354 ----------HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 PK ++E E + + + ++ + D EE+ Sbjct: 353 VSKTTESDLLQSPKERKMTAQSEEYAKQLEYKGNLDFDQMQNNNPFHFLTDQSEEAPFLM 412 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQ-----------------HAAHERL--IFEKMR 444 + ++ + Q + + D H +E+ F K + Sbjct: 413 GHKKTSDEYPNKIPLGKQQNSSIFLHDNQDASFLQQQLRKINHREHLQNEKHFETFGKFK 472 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHD--------------------------- 477 + T I ++T IID ++ E Sbjct: 473 CQVHGTFIITETENEIIIIDQHAAHERVLYEQMKKSITSPGQNLLMAEFVPLSERAVEIL 532 Query: 478 ----EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 E L +G+ ER AI + +P + +L+ DI + + TL + Sbjct: 533 SLNVEKLKEIGLVVERVSHCAIMVNSLPEVFKNTPTNELIEDIASLLEEEIEPRTL---L 589 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E + A +AC +I++ + E+ LL ME P++ QCNHGRPT I+L +IEKLF Sbjct: 590 ERVYANIACKRAIKANHNLTREEIEELLTLMENIPHTGQCNHGRPTHIRLPRKEIEKLFL 649 Query: 594 R 594 R Sbjct: 650 R 650 >gi|301156622|emb|CBW16093.1| methyl-directed mismatch repair protein [Haemophilus parainfluenzae T3T1] Length = 616 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 168/579 (29%), Positives = 288/579 (49%), Gaps = 48/579 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA ++++ I GG S +I DNG Sbjct: 1 MAIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIHIDIENGGASLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + N Sbjct: 61 SGIPKEELSLALARHATSKIAVLDDLEAILSLGFRGEALASISSVSRLTLTSRTAEQNEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G ++ + +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGREMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A ++FT + + + +R++ + G+DF+ +A+ ++ K +++ L G+ Sbjct: 181 AKFNIAFTLTHNGKIVRQYRPATNEEQQLKRVAAICGDDFVQHALRIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F R + Y +INGR V+DK I IR AYAE + +YP VL ++++P VDV Sbjct: 241 ATPEFTRSQNDLSYCYINGRMVRDKVITHAIRQAYAEHLHTEQYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAIN---------------------------KKG 330 NVHP K +RF +I +FI Q + A+N + Sbjct: 301 NVHPTKHEVRFHQARLIHDFICQGVTNALNAIPQAELDLAPTINETREPSASYQTHYELK 360 Query: 331 ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLS------TNDLLPS 384 + ++ S++HQ ++ + ++ ++ +E + + +L+ S Sbjct: 361 PNRAAAGQNIFASNYHQPREKQSENRPHFSNRSDYVPSYDYREQQPTKTEQRLYGELVRS 420 Query: 385 DDPTYSEDNDPVEE--SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 + + N VE+ + + A A I ++ Q ++ A + L +E Sbjct: 421 TEASQVFTNSIVEQQLPQTSETGYLRALALIENKALLLQQNQQFYLMSL-AKLQTLNYE- 478 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK-AERFGPNAIAIREIP 501 +I+ Q LL P I L E + + + G + E + + ++P Sbjct: 479 --LTLQQGEISQQPLLIPIIFRLDEKQFEQWKKQKAFFQQSGFEFIENEAQLRLTLNKVP 536 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 AIL +N+ + + ++ E +++ + D + + T+ Sbjct: 537 AILRTQNLQKCVVSLLAEHVEN-----MPDFLTALCQTL 570 >gi|312882818|ref|ZP_07742551.1| DNA mismatch repair protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309369510|gb|EFP97029.1| DNA mismatch repair protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 633 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 168/619 (27%), Positives = 281/619 (45%), Gaps = 65/619 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KELIENSLD+ +SR++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVVKELIENSLDSGASRIDIDIDKGGSKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LT+ SRP Sbjct: 61 KGIAKDELGLALSRHATSKIHCLDDLETIMSLGFRGEALASISSVSRLTITSRPAAQEQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E + I +++RR+A+ Sbjct: 121 WSAYSEGRNMEVKLQPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFSHIEELVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS + T+ +R++ V G F+ + +++ + N + L G+ Sbjct: 181 SRFDVSLNLKHNGKIVKQYRASKTDKQTEQRLASVCGSAFVRHMLKIELEHNGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R + Y ++NGR ++DK I IR +Y ++ ++ VL +EIDP+QVDV Sbjct: 241 TTPQGARQQGDLQYCYVNGRMMRDKLINHAIRQSYETSLEANQFAAYVLFIEIDPQQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL-- 355 NVHPAK +RF ++ +FI Q++ A+ + L++ +FHQD P Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSDALVQGAYIEPIPLNE---GAFHQDQCPMKSQSA 357 Query: 356 --------------PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA 401 P Y QE ++E R + + + + S Sbjct: 358 SAAYERERQVIDSVPNYPGKEVKVQETAQVREQRDWVTPQSHTREKITEQYSSKKPRSNE 417 Query: 402 THYQL----------------------------GIACAQIHQNYIISQTTDGLVIVDQHA 433 G A IH Y+++ G IV+ Sbjct: 418 IKAYQQLLTVTREAKDDLEDTTELTSPNQVLSIGKAMHVIHDQYLVTADKLGTNIVNLAK 477 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 A + ++ + SQ LL P + L + ++ + R G++ G Sbjct: 478 AEWLRVRGQLLF---EEGLKSQPLLVPLAMKLDNNLLKIADDYKQLFTRFGLEIRTRGKE 534 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDS---STTYTLQDRIENI--LATMACYGSIRS 548 +I + +P +L ++N+ QL+ D++ + + S + ++ + + T ++ Sbjct: 535 SIIVMGVPNLLRQQNLQQLIPDLLTFVGNHEVESQSLNKKELADWLSFQITR-----VK- 588 Query: 549 GRKMQSIEMNRLLREMEKN 567 E ++L ++E Sbjct: 589 -DTYTLSEAIQILADIELT 606 >gi|261493052|ref|ZP_05989592.1| DNA mismatch repair protein MutL [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496340|ref|ZP_05992735.1| DNA mismatch repair protein MutL [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307984|gb|EEY09292.1| DNA mismatch repair protein MutL [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311272|gb|EEY12435.1| DNA mismatch repair protein MutL [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 627 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 153/563 (27%), Positives = 271/563 (48%), Gaps = 46/563 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++ ++ I GG +I DNG G Sbjct: 10 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANTIQIDIEKGGSQLIRIRDNGCG 69 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ +++P+A+ RH TSKIS +D I + GFRGEAL SI +VS LTL SR + Q Sbjct: 70 ISKQDLPLALARHATSKISSLEDLEAILSLGFRGEALASISSVSRLTLTSRTAEQTEAWQ 129 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G +++ ++P + GT +EV +LFF PAR FL++++ E I +V+RR+A+A Sbjct: 130 AYAQGREMAVEIQPASHPIGTTIEVANLFFNTPARRKFLRTDKTEFAHIDEVVRRIALAK 189 Query: 180 PKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P +SF+ S + ++ +R++ + G++FI ++ ++ + ++ L G+ Sbjct: 190 PNISFSLSHNGKIVRQYRKVQDNSVEQQQKRVAAICGDEFIQHSTYIDWQHGDLHLHGWV 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P R + Y ++NGR ++DK I IR AY ++I G YP V+ L++DP VDV Sbjct: 250 GSPALARLQNDLCYSYVNGRMMRDKTINHAIRQAYGDSIASGYYPAFVIFLDLDPTMVDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI---------------STSSVLSKKMI 342 NVHPAK +RF ++ +FI+Q + ++ + + Sbjct: 310 NVHPAKHEVRFHQGRLVHDFILQGVLNSLQQTQPTLELRNEVNEPLPSYIQDTNRQAAGQ 369 Query: 343 SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE--ESE 400 + F AP+ + ++ F + N +S++ + + + +++ Sbjct: 370 NIFVSQTAPQAAEFTQKNASRSSYTPKFERSNSVSSSAQKWYKELVGGDLHQTTPTIKTQ 429 Query: 401 ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH-------------ERLIFE------ 441 +T + H+ +SQ + + H + E F Sbjct: 430 STLVEPKTEPQTEHKTEAVSQKITQIAPLASHHSQALAIVKNQAVLIKEEENFYLLPLAT 489 Query: 442 --KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER---FGPNAIA 496 +++ K SQ LL P + L + + + E+L LG + Sbjct: 490 LAELKLKLQLEKGQSQALLIPLNLSLDQQQTERWQQTKEELTELGFSISEKQWQAQTRLT 549 Query: 497 IREIPAILSKKNIPQLLRDIIDE 519 + +P + ++N+ QLL + ++ Sbjct: 550 VLSVPQAVREQNLQQLLFALFNQ 572 >gi|296125279|ref|YP_003632531.1| DNA mismatch repair protein MutL [Brachyspira murdochii DSM 12563] gi|296017095|gb|ADG70332.1| DNA mismatch repair protein MutL [Brachyspira murdochii DSM 12563] Length = 608 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 174/609 (28%), Positives = 302/609 (49%), Gaps = 22/609 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I KL + + N+IAAGE+IERP+ +KEL+EN++D+ +S +E + G + DNG G Sbjct: 5 IMKLPQSVANRIAAGEVIERPASMLKELLENAVDSGASDIEVSVEEAGIKSMIVEDNGDG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+P+AV H TSKI +D +I+T GFRGEAL SI V++L ++S+ N G + Sbjct: 65 IHFDELPLAVTHHATSKIHSIEDLDSIYTLGFRGEALASISDVTNLEIVSKSRDENNGGK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G KI +P A + GT V ++LFF IPAR FLK E L+ +V A+ P Sbjct: 125 IIIEGGKIIEHKPAAASQGTKVIAKNLFFNIPARYKFLKHISREFFLVKEVFDMEALVQP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++S T + E + + N +E+ + N++ + G Sbjct: 185 QISMKLKNNGKVVSSYIKADTLKDRIEN--YLSDSNIFRNLIEIEIEKNDVLIYGLFSNS 242 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 ++ ++F+N R ++++ + I+ AY+ IP RYP L + ID ++DVNVH Sbjct: 243 KISQSIRKNNFIFLNNRPIENRVLSYAIKNAYSNAIPKERYPFFFLYINIDSSKIDVNVH 302 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV-----LSKKMISSFHQDNAPKTHL 355 P+K +R +N I + +I IN G + SV + K + +F N + Sbjct: 303 PSKKEVRIKNEREISGMLYNAISNNINNAGNNFDSVNIEVDIDKDITPTFPIQNNNFYNN 362 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE------DNDPVEESEATHYQLGIA 409 A + N + + + ++ + T+ +N+ + A Sbjct: 363 TDSANNSKNNNVINNINQTSQNYSNKNNLGNYTFDNTYPKTINNNKTNYENKEFGEYTRA 422 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q+ +YI+++ + I+DQHAA+ERL +E++ + S KI + LL P I+ + E Sbjct: 423 IGQVFSSYIVAERGSEMYIIDQHAAYERLNYERIYKTLISKKIEYEKLLIPCEIEYKDYE 482 Query: 470 CALIMEHDEDLHRLGIKAERFGPNA----IAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 ++ + + +GIK E ++ IP + I ++++DI+D I+ Sbjct: 483 IDILNSSKKSIEEIGIKFEVNSKHSIIIEDIPIYIP---RNQKIEKIIKDILDIYINKGD 539 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 L+ I++ +T++C S ++G K+ + +M LL +E+ + C HGRP ++L Sbjct: 540 NNNLEKIIKHTCSTISCKYSPKAGDKLSNSDMQTLLDLLEEENILTNCPHGRPFVLRLSK 599 Query: 586 SDIEKLFGR 594 ++K F R Sbjct: 600 EYLDKKFFR 608 >gi|298242707|ref|ZP_06966514.1| DNA mismatch repair protein MutL [Ktedonobacter racemifer DSM 44963] gi|297555761|gb|EFH89625.1| DNA mismatch repair protein MutL [Ktedonobacter racemifer DSM 44963] Length = 599 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 165/611 (27%), Positives = 281/611 (45%), Gaps = 53/611 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L +++ +IAAGE+IERP IKEL+EN+LDA + + + GGG +++D+G Sbjct: 20 PIVVLPDEVAERIAAGEVIERPVSVIKELVENALDARACAIRIEVRGGGLRLMRVSDDGT 79 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+ A RH TSK+S +D + T GFRGEAL SI ++ +TL SR + + Sbjct: 80 GILEDELERACLRHSTSKLSTIEDLGRLGTLGFRGEALASIATIAEMTLESRASETEDES 139 Query: 120 QIAISGE------KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR 173 + + ++ A PGT V VRDLFF +PARL F++ + E I IR Sbjct: 140 EERPAQFITLRGGEVVERGRKARVPGTTVTVRDLFFNVPARLKFIRGARTENGHILHYIR 199 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE-KSNEIT 232 R A+ YP V FT + + S +G ++++ E+ + Sbjct: 200 RYALGYPGVRFTLVLDEHIALQ---TSGSGELKTALTEIYSLPLNEMLYEVERGAGEQYR 256 Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 + GY G + N +F+NGR VQ + + + Y + G++P++VL +E+ P Sbjct: 257 VHGYIGNRVLAQNNRQYVTLFVNGRWVQSRVLYDAVEKGYRGLLAKGKHPLLVLFIEVAP 316 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK 352 +VDVNVHPAK+ +R + + +++Q + + + + Sbjct: 317 DEVDVNVHPAKTEVRLFREREVLELLTEAVQAVLERSPVLPEEI---------------- 360 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 K+ + TQ +L R L + + + A AQ Sbjct: 361 ----KFPGPILATQRRLPGARRR-----GLHMSETAEDYLAEAAPPASAEAIAQLCPLAQ 411 Query: 413 IHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDF----------NSTKITSQTLLTPE 461 + + I+++ DG L +VDQH AHER+I+E +RQ + + LL P Sbjct: 412 LQRAVILAEAPDGSLYLVDQHRAHERVIYEHLRQRYAHGIDSAEDEEGEAVNGHLLLEPV 471 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 I++L + L+ E L LG++ ERFG + +R IP + + + D++ Sbjct: 472 IVELKRHQAELLEERLPMLRGLGLECERFGGRSFLVRSIPGGEGYEQLVGQVEDLVQIAA 531 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 + + +D ++L ++C ++R GR++ E LL + + + C HG P + Sbjct: 532 EDN-----EDWEHSLLIGLSCRSALRRGRELSQGEQQSLLTSLARASVPAVCPHGSPILL 586 Query: 582 KLKLSDIEKLF 592 S + + F Sbjct: 587 HYSRSFLIEKF 597 >gi|53729030|ref|ZP_00134309.2| COG0323: DNA mismatch repair enzyme (predicted ATPase) [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209412|ref|YP_001054637.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae L20] gi|303251733|ref|ZP_07337904.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307249031|ref|ZP_07531039.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251230|ref|ZP_07533151.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307262460|ref|ZP_07544105.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|126098204|gb|ABN75032.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302649163|gb|EFL79348.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854489|gb|EFM86684.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306856746|gb|EFM88881.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306867837|gb|EFM99668.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 622 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 168/560 (30%), Positives = 273/560 (48%), Gaps = 45/560 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG +I DNG G Sbjct: 6 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNGCG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS LTL SRP Q Sbjct: 66 IGKQDLALALARHATSKISSLEDLEMILSLGFRGEALASISSVSRLTLTSRPAGQAEAWQ 125 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G ++ ++P + GT +EV +LFF PAR FL++++ E I +V+RR+A+A Sbjct: 126 AYAQGREMEVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFTHIDEVVRRIALAK 185 Query: 180 PKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + FT + + ++ R++ + G+DFI NA+ ++ + ++ L G+ Sbjct: 186 PNIGFTLTHNGKTVRQYRKVQDNSVEQQQRRVAAICGDDFIQNAIHIDWQHGDLHLHGWI 245 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET-IPLGRYPVVVLLLEIDPRQVD 296 G+P +R + Y ++NGR ++DK I IR AY T +P G YP V+ L+IDP QVD Sbjct: 246 GLPNISRPQNDLCYSYVNGRMMRDKTINHAIRQAYEATDMPEGNYPAFVVFLDIDPSQVD 305 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-------- 348 VNVHPAK +RF ++ +FI+Q +Q A+ + + + + S+ +D Sbjct: 306 VNVHPAKHEVRFHQGRLVHDFILQGVQTALQGQSEIGLTDQVNEPLPSYQRDTNRMAAGG 365 Query: 349 -----------------NAPKTHLPKYA---TSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + +P Y+ TS++ + +K + + D Sbjct: 366 NSFLAPQQAVEFSENFVKPTASRMPSYSPRTTSVSKSAQKWYGELISQPQPQSDNRQDFV 425 Query: 389 YSEDN-------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL-IF 440 + N E+E Q + Q I Q L+ DQ L Sbjct: 426 EPKTNAAPVIFAQERVEAEHKPIQSVPMKSDHWQPLAIVQNQALLLKADQQFYLISLEKL 485 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER---FGPNAIAI 497 ++R K SQ LL P + L E + L LG G +++ Sbjct: 486 ARLRFQTQLAKGESQALLIPLNLSLDEVQAQHWQILKAPLAELGFVISEKAWQGQIRLSL 545 Query: 498 REIPAILSKKNIPQLLRDII 517 ++P +L ++N+ Q+L ++ Sbjct: 546 SQVPRLLREQNLQQILLGLL 565 >gi|152973040|ref|YP_001338186.1| DNA mismatch repair protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|330003342|ref|ZP_08304585.1| DNA mismatch repair protein [Klebsiella sp. MS 92-3] gi|166232094|sp|A6TH85|MUTL_KLEP7 RecName: Full=DNA mismatch repair protein mutL gi|150957889|gb|ABR79919.1| DNA mismatch repair protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328537004|gb|EGF63294.1| DNA mismatch repair protein [Klebsiella sp. MS 92-3] Length = 619 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 165/614 (26%), Positives = 273/614 (44%), Gaps = 61/614 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +V+ LTL SR + Sbjct: 61 SGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQQEA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q ++ +V+P A GT +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ +A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKVMRQYRAVAQDGQRERRLGTICGAAFLEHALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPLHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHPAK +RF ++ +FI Q + + ++ + + +N Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLDAPLAEKDDPPAPRPMPENRIAAGGN 360 Query: 357 KYA-----------------------------TSLTNTQEKLFLQENRLSTNDLLPSDDP 387 ++A S + Q Q+ L L P Sbjct: 361 QFARPAEAREPATRFSITPSREPAASSGKPGGASWPHAQPGYQKQQGALYRQLLDTPTSP 420 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 + E G + + + + GL ++ A L ++ Sbjct: 421 KPALQPPAAAELAGHSQSFGRVLTIVGGDCALLEREGGLALLSLTVAERWLRQAQL--TP 478 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + + +Q LL P + + EGE + L +LGI + +R +P L ++ Sbjct: 479 GAEAVCAQPLLIPLRLKVTEGEKQALAAAQPALAQLGIDV-HTDALHVTVRAVPLPLRQQ 537 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI-------EMNRL 560 N+ L+ ++I + + + NI MA R + S + L Sbjct: 538 NLQILIPELIGYLAQQNAFD-----VGNIAQWMA--------RNLTSEQTSWNMAQAIAL 584 Query: 561 LREMEKNPNSSQCN 574 L ++E+ C Sbjct: 585 LADVERL-----CP 593 >gi|238892654|ref|YP_002917388.1| DNA mismatch repair protein [Klebsiella pneumoniae NTUH-K2044] gi|238544970|dbj|BAH61321.1| DNA mismatch repair protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 619 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 165/614 (26%), Positives = 273/614 (44%), Gaps = 61/614 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +V+ LTL SR + Sbjct: 61 SGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQQEA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q ++ +V+P A GT +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ +A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKVMRQYRAVAQDGQRERRLGTICGAAFLEHALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPLHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHPAK +RF ++ +FI Q + + ++ + + +N Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLDAPLAEKDDPPAPRPMPENRIAAGGN 360 Query: 357 KYA-----------------------------TSLTNTQEKLFLQENRLSTNDLLPSDDP 387 ++A S + Q Q+ L L P Sbjct: 361 QFARPAEAREPATRFSITPSREPAASSGKPGGASWPHAQPGYQKQQGALYRQLLDTPTAP 420 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 + E G + + + + GL ++ A L ++ Sbjct: 421 KPALQPPAAAELAGHSQSFGRVLTIVGGDCALLEREGGLALLSLTVAERWLRQAQL--TP 478 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + + +Q LL P + + EGE + L +LGI + +R +P L ++ Sbjct: 479 GAEAVCAQPLLIPLRLKVTEGEKQALAAAQPALAQLGIDV-HTDALHVTVRAVPLPLRQQ 537 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI-------EMNRL 560 N+ L+ ++I + + + NI MA R + S + L Sbjct: 538 NLQILIPELIGYLAQQNAFD-----VGNIAQWMA--------RNLTSEQTSWNMAQAIAL 584 Query: 561 LREMEKNPNSSQCN 574 L ++E+ C Sbjct: 585 LADVERL-----CP 593 >gi|112361948|gb|ABI15931.1| MutL [Klebsiella pneumoniae] Length = 619 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 165/614 (26%), Positives = 273/614 (44%), Gaps = 61/614 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +V+ LTL SR + Sbjct: 61 SGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQQEA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q ++ +V+P A GT +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ +A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKVMRQYRAVAQDGQRERRLGTICGAAFLEHALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPLHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHPAK +RF ++ +FI Q + + ++ + + +N Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLDAPLAEKDDPPAPRPMPENRIAAGGN 360 Query: 357 KYA-----------------------------TSLTNTQEKLFLQENRLSTNDLLPSDDP 387 ++A S + Q Q+ L L P Sbjct: 361 QFARPAEAREPATRFSITPSREPAASSGKPGGASWPHAQPGYQKQQGALYRQLLDTPTAP 420 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 + E G + + + + GL ++ A L ++ Sbjct: 421 KPALQPPAAAELAGHSQSFGRVLTIVGGDCALLEREGGLALLSLTVAERWLRQAQL--TP 478 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + + +Q LL P + + EGE + L +LGI + +R +P L ++ Sbjct: 479 GAEAVCAQPLLIPLRLKVTEGEKQALAAAQPALAQLGIDV-HTDALHVTVRAVPLPLRQQ 537 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI-------EMNRL 560 N+ L+ ++I + + + NI MA R + S + L Sbjct: 538 NLQILIPELIGYLAQQNAFD-----VGNIAQWMA--------RYLTSEQTSWNMAQAIAL 584 Query: 561 LREMEKNPNSSQCN 574 L ++E+ C Sbjct: 585 LADVERL-----CP 593 >gi|307258062|ref|ZP_07539814.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863425|gb|EFM95356.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 661 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 164/559 (29%), Positives = 268/559 (47%), Gaps = 45/559 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG +I DNG G Sbjct: 45 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNGCG 104 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS LTL SRP Q Sbjct: 105 IGKQDLALALARHATSKISSLEDLEMILSLGFRGEALASISSVSRLTLTSRPEGQAEAWQ 164 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G ++ ++P + GT +EV +LFF PAR FL++++ E I +V+RR+A+A Sbjct: 165 AYAQGREMEVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFTHIDEVVRRIALAK 224 Query: 180 PKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + FT + + ++ R++ + G+DFI NA+ ++ + ++ L G+ Sbjct: 225 PNIGFTLTHNGKTVRQYRKVQDNSVEQQQRRVAAICGDDFIQNAIHIDWQHGDLHLHGWI 284 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET-IPLGRYPVVVLLLEIDPRQVD 296 G+P +R + Y ++NGR ++DK I IR AY T +P G YP V+ L+IDP QVD Sbjct: 285 GLPNISRPQNDLCYSYVNGRMMRDKTINHAIRQAYEATDMPEGNYPAFVVFLDIDPSQVD 344 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-------- 348 VNVHPAK +RF ++ +FI+Q +Q A+ + + + + S+ +D Sbjct: 345 VNVHPAKHEVRFHQGRLVHDFILQGVQTALQGQSEIGLTDQVNEPLPSYQRDTNRMAAGG 404 Query: 349 -----------------NAPKTHLPKYAT---SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 +H+P Y+ ++ + +K + + N D Sbjct: 405 NSFLAPQQAVEFTENFAKPTASHMPNYSPRTSGVSKSAQKWYGELVSQPQNQSDNIQDLI 464 Query: 389 YSEDN--------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 + N + E + A I+ L Q Sbjct: 465 EPKANFAPVIFAQEIDEAEPKPTQVVSAAIGHWQPLAIVQNQALLLKAEQQFYLLSLEKL 524 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER---FGPNAIAI 497 ++R TK SQ LL P + L E + L LG G +++ Sbjct: 525 ARLRFQTQLTKGESQALLIPLNLSLDEQQTQRWQTLKTPLAELGFAISEKTWQGQIRLSV 584 Query: 498 REIPAILSKKNIPQLLRDI 516 ++P +L ++N+ Q+L + Sbjct: 585 TQVPRLLREQNLQQILLSL 603 >gi|254411766|ref|ZP_05025542.1| MutL C terminal dimerisation domain family [Microcoleus chthonoplastes PCC 7420] gi|196181488|gb|EDX76476.1| MutL C terminal dimerisation domain family [Microcoleus chthonoplastes PCC 7420] Length = 575 Score = 395 bits (1015), Expect = e-107, Method: Composition-based stats. Identities = 163/616 (26%), Positives = 272/616 (44%), Gaps = 77/616 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L +++N IAAGE+I+ + ++EL+EN+LDA ++R+ + ++ DNG Sbjct: 4 SIQTLPTEVVNLIAAGEVIDSLAAVVRELVENALDAGATRIAVAVW-FDLWRVRVADNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ A H TSKI DD I + GFRGEAL SI A++ L + SR Sbjct: 63 GMDLTDLQKAASAHSTSKIKSRDDLYKITSLGFRGEALHSIAALAELEICSRQTGFEGWR 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + VA+ PGT+V V +LF R L S + +I I+ +A+ + Sbjct: 123 CTYNTQGEAEETEAVAIAPGTVVTVSNLFGKWRLRRQGLPSRSQQQRIIQATIQNIALCH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDF--------------INNAVEL 224 P V++ + + ++ T P+ + QV D E Sbjct: 183 PSVTWQVQQSDRSWFTISPGKTTQQIIPQLLKQVRVHDLQQLTLDVPTPEEGSAGEIREF 242 Query: 225 NEKSNEITLQG-----YTGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPL 278 S T G G+P +R + V NGR V+ + TI TA A+T+P Sbjct: 243 TYNSTPKTRHGASLHLVLGLPDRCHRRRPDWVKVATNGRLVRSPELEQTILTAMAKTLPR 302 Query: 279 GRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS 338 RYP+ + L+I P Q+D N HPAK+ I + + + I Q+I++A+ Sbjct: 303 DRYPICFIHLQICPSQIDWNRHPAKAEIYLHSLSYWQEQISQAIEQALR----------- 351 Query: 339 KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 I + + D A ++H + LT + +K + + PSD Sbjct: 352 ---IGAENFDTASQSH--RVGKLLTASAKKGVYHLDESPKQERNPSDIGLIE-------- 398 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 A AQ+ YI+++ G+ +++QH AHER+++E++R + + +L Sbjct: 399 --------LKAVAQVRNMYILAEHDTGMWLIEQHIAHERVLYEQLRDRWQLVPLEPPVIL 450 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 E L R+G++ E FG A+R PA+L +++ D D Sbjct: 451 NYLTPV-----------QLEQLQRIGLEIEPFGDQLWAVRNAPALLHQRD------DCAD 493 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 +++ S LQ N AC +IR+G + +M LL + + + C HGRP Sbjct: 494 ALLELSLGGDLQ----NAQVATACRSAIRNGTPLTLEQMQTLLNQWKMTRHPRTCPHGRP 549 Query: 579 TFIKLKLSDIEKLFGR 594 ++ L+ S + + F R Sbjct: 550 IYLPLEESALARFFRR 565 >gi|186683441|ref|YP_001866637.1| DNA mismatch repair protein [Nostoc punctiforme PCC 73102] gi|238691251|sp|B2IYW1|MUTL_NOSP7 RecName: Full=DNA mismatch repair protein mutL gi|186465893|gb|ACC81694.1| DNA mismatch repair protein MutL [Nostoc punctiforme PCC 73102] Length = 568 Score = 395 bits (1015), Expect = e-107, Method: Composition-based stats. Identities = 156/611 (25%), Positives = 268/611 (43%), Gaps = 76/611 (12%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++ I AGE+I+ + ++EL+ENSLDA ++R+ + + ++ DNG G Sbjct: 5 IQALPTEVVYLITAGEVIDSLASVVRELVENSLDAGATRIVVSLW-PQQWRIRVADNGCG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M +++ A H TSKI D I++ GFRGEAL S+ ++ L ++SRP G + Sbjct: 64 MNLDDLQQAATAHSTSKIRSSADLWKINSLGFRGEALHSLTTLADLEILSRPVDGKLGWR 123 Query: 121 I-AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I +G K+ V A+ PGT+V V +LF +R L + + + I ++A+ + Sbjct: 124 ISYGNGGKVVQVEVTAIAPGTVVTVSNLFGNCSSRRQGLPTTAQQMKAVQATIYQIALCH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNF-PERISQVIGEDFINNAVELNEKSN--------- 229 P V++ + ++ T G P+ + QV D +E+ + Sbjct: 184 PHVTWQIWQNDRQWFTISPARTTGQLLPQILPQVRQGDLQEVKLEIPNPPHSPLPCTNAI 243 Query: 230 -----EITLQGYTGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPV 283 L G+P +R + V INGR V+ + TI +A+ T+P RYP+ Sbjct: 244 HRVSPHSALTLVVGLPDRCHRHRPDWVRVAINGRMVKTPELEQTILSAFHRTLPRDRYPI 303 Query: 284 VVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS 343 L L I P Q++ N +PAK+ I + I Q+I +A++ + + +S Sbjct: 304 CFLHLAISPDQINWNRNPAKTEIYLNEIIYWQEQITQAINQALSISSSNLKEAVHTTRVS 363 Query: 344 SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 L ++ N + + + Sbjct: 364 KL-----------------------------------LKAAEAKGGYNFNPQNPKEDRKN 388 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 A AQ+ YI+++ G+ +V+QH AHER+++E++ D+ + +L Sbjct: 389 PNSLKAVAQVSNTYIVAEHPGGMWLVEQHIAHERVLYEQLCDDWQLVPVEPPIIL----- 443 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 L + L R+G+ E FG A+R IPA L +++ D + I++ Sbjct: 444 ------YQLSLAQVSQLQRIGLDIESFGEQLWAVRNIPAPLQQRD------DCAEAILEL 491 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 S LQ + AC +IR+G M EM LL ++ N C HGRP ++ L Sbjct: 492 SWGGDLQTAQVAV----ACRSAIRNGTPMNQQEMQTLLDNWQRTRNPRTCPHGRPIYLSL 547 Query: 584 KLSDIEKLFGR 594 + S + + F R Sbjct: 548 EESALARFFRR 558 >gi|307246895|ref|ZP_07528960.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307255877|ref|ZP_07537678.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260330|ref|ZP_07542037.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306852180|gb|EFM84420.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306861145|gb|EFM93138.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865581|gb|EFM97462.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 622 Score = 395 bits (1015), Expect = e-107, Method: Composition-based stats. Identities = 164/559 (29%), Positives = 268/559 (47%), Gaps = 45/559 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG +I DNG G Sbjct: 6 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNGCG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS LTL SRP Q Sbjct: 66 IGKQDLALALARHATSKISSLEDLEMILSLGFRGEALASISSVSRLTLTSRPAGQAEAWQ 125 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G ++ ++P + GT +EV +LFF PAR FL++++ E I +V+RR+A+A Sbjct: 126 AYAQGREMEVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFTHIDEVVRRIALAK 185 Query: 180 PKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + FT + + ++ R++ + G+DFI NA+ ++ + ++ L G+ Sbjct: 186 PNIGFTLTHNGKTVRQYRKVQDNSVEQQQRRVAAICGDDFIQNAIHIDWQHGDLHLHGWI 245 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET-IPLGRYPVVVLLLEIDPRQVD 296 G+P +R + Y ++NGR ++DK I IR AY T +P G YP V+ L+IDP QVD Sbjct: 246 GLPNISRPQNDLCYSYVNGRMMRDKTINHAIRQAYEATDMPEGNYPAFVVFLDIDPSQVD 305 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-------- 348 VNVHPAK +RF ++ +FI+Q +Q A+ + + + + S+ +D Sbjct: 306 VNVHPAKHEVRFHQGRLVHDFILQGVQTALQGQAEIDLTHQVNEPLPSYQRDTNRMAAGG 365 Query: 349 -----------------NAPKTHLPKYAT---SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 +H+P Y+ ++ + +K + + N D Sbjct: 366 NSFLASQQAVEFTENFAKPTASHMPNYSPRTSGVSKSAQKWYGELVSQPQNQSDNIQDLI 425 Query: 389 YSEDN--------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 + N + E + A I+ L Q Sbjct: 426 EPKANFAPVIFAQEIDEAEPKPTQVVSAAIGHWQPLAIVQNQALLLKAEQQFYLLSLEKL 485 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER---FGPNAIAI 497 ++R TK SQ LL P + L E + L LG G +++ Sbjct: 486 ARLRFQTQLTKGESQALLIPLNLSLDEQQTQRWQTLKTPLAELGFAISEKTWQGQIRLSV 545 Query: 498 REIPAILSKKNIPQLLRDI 516 ++P +L ++N+ Q+L + Sbjct: 546 TQVPRLLREQNLQQILLSL 564 >gi|290473399|ref|YP_003466265.1| methyl-directed mismatch repair protein [Xenorhabdus bovienii SS-2004] gi|289172698|emb|CBJ79469.1| enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA [Xenorhabdus bovienii SS-2004] Length = 647 Score = 395 bits (1015), Expect = e-107, Method: Composition-based stats. Identities = 161/636 (25%), Positives = 278/636 (43%), Gaps = 77/636 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MAIRILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 CGIDQQDLTLALARHATSKIASLDDLEAIVSMGFRGEALASISSVSRLTLTSRTESQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +P A GT VEV DLF+ PAR FL++E+ E + +V+RR+A+ Sbjct: 121 WQAYAEGRDMEVTVKPAAHPVGTTVEVLDLFYNTPARRKFLRTEKTEFGHLDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + R++ + G F+ A+ L+ + + ++++G+ Sbjct: 181 ARLDVAINLHHNGKLVRQYRPAKEESQHERRLAAICGMAFVQQALALSWQHDSLSIKGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++NGR ++D+ I IR AY + + + P VL LEIDP QVDV Sbjct: 241 ADPMSDTVGGDIQYCYVNGRMMRDRLINHAIRQAYQDLLQGEKQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINK----------KGISTSSVLSKKMISSFHQ 347 NVHPAK +RF ++ +FI Q + + + +S + + +S+ Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQGVAAVLKQRGKGAELALGCEEPAASWVPENRLSAGEN 360 Query: 348 DNAPKT-------------------------HLPKYATSLT-NTQEKLFLQENRLSTNDL 381 + P+ + N +L EN Sbjct: 361 HFLQQNTASLKASPPSRAAAAPSVSSGGHDKEQPQLDRPHSGNDTRQLHHGENYQKKQGE 420 Query: 382 LPSDDPTYSEDNDPVEESE----------------------ATHYQLGIACAQIHQNYII 419 L + + E Y G + +Y + Sbjct: 421 LYQKMMQSAPEEKRPLFPERAVSVREKAAPIPVGAALLQGKNISYSFGKVLSIHAASYAL 480 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ G+ ++ A ++++ + SQ LL P + L + E + ++ E Sbjct: 481 IESPLGIGLLSLPVAERW--LKQVQLTPGELGLKSQPLLIPLKLSLSQAEIDALKQNSEL 538 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L GI+ + I + L ++N+P+LL ++++ +++ + E + Sbjct: 539 LKTFGIE-STVAHGKVTIHAVSLPLRQQNLPKLLPELLNYLVEQPSACA-----EQVAIW 592 Query: 540 MACY-GSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 ++ + GS + +LL ++E+ C Sbjct: 593 LSRHVGS--EHETWNIAQAVQLLADVERL-----CP 621 >gi|307267460|ref|ZP_07548947.1| MutL dimerization [Thermoanaerobacter wiegelii Rt8.B1] gi|306917517|gb|EFN47804.1| MutL dimerization [Thermoanaerobacter wiegelii Rt8.B1] Length = 551 Score = 395 bits (1015), Expect = e-107, Method: Composition-based stats. Identities = 164/555 (29%), Positives = 278/555 (50%), Gaps = 29/555 (5%) Query: 63 MTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M + +A +RH TSKI D +I T GFRGEAL SI AVSH+TL ++ G + Sbjct: 1 MNEIDAILAFERHATSKIKSDNDLYSIGTLGFRGEALASIAAVSHVTLQTKEEGALFGTK 60 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G K+ G +EVRD+FF PAR FLK ET ITDV+ ++ +++P Sbjct: 61 IVVEGGKVVEKTTCGCAKGCSIEVRDVFFNTPARRKFLKRPSTETMYITDVVTKLCLSHP 120 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF + + ++ S GN + I ++ G + ++ + + +S ++ L+ G Sbjct: 121 EISFKYVKDRKLQF---ITSGTGNIEDVILRLFGNEVYSSLMSASFESEDLKLKILAGKN 177 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + N N N + ++NGR V++K + + + A+ IP+ RYP V L +EIDPRQ+DVN+H Sbjct: 178 SLNYSNRNMQFFYVNGRYVKNKTLSAAVDEAFKTYIPVNRYPAVFLYMEIDPRQIDVNIH 237 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK--------MISSFHQDNAPK 352 P+K I+F + I + ++I+ +++K + + +K S Q Sbjct: 238 PSKLEIKFSDERRIFEAVYKTIKDSLHKYNLIPEVKIEEKKNIFEIETPTISAEQTKLYL 297 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG----- 407 T K + F +N +++L + S DN E H + Sbjct: 298 TSSDKELEEEKKKFDNEFKGKNVFLKDNVLKENSKNSSLDNHLAVYEEYEHEKEEINKND 357 Query: 408 --------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 + YII + D I+DQHAAHER+++EK + KI ++ + Sbjct: 358 LAKKISDIRIVGTLFSTYIIVEKEDVFYIIDQHAAHERILYEKFTSQYE--KIQTRQVTF 415 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P +++L + L+ + E L++LG E FG N+I +RE+P IL + QL DI+++ Sbjct: 416 PIVVELQPRDLELVHQEKELLNKLGYVFEEFGNNSIILREVPVILGQPEARQLFIDIVEK 475 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 + D + + ENI+ MAC ++++ + E+++L +++ N C HGRP Sbjct: 476 LKDKELINKISLKEENII-MMACKAAVKAMDNLSEKEIHKLFEDLKITENPYTCPHGRPV 534 Query: 580 FIKLKLSDIEKLFGR 594 I + + +EK+F R Sbjct: 535 IIAITKTQLEKMFKR 549 >gi|254363110|ref|ZP_04979164.1| DNA mismatch repair protein MutL [Mannheimia haemolytica PHL213] gi|153094997|gb|EDN75560.1| DNA mismatch repair protein MutL [Mannheimia haemolytica PHL213] Length = 627 Score = 395 bits (1014), Expect = e-107, Method: Composition-based stats. Identities = 153/563 (27%), Positives = 272/563 (48%), Gaps = 46/563 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++ ++ I GG +I DNG G Sbjct: 10 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANTIQIDIEKGGSQLIRIRDNGCG 69 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ +++P+A+ RH TSKIS +D I + GFRGEAL SI +VS LTL SR + Q Sbjct: 70 ISKQDLPLALARHATSKISSLEDLEAILSLGFRGEALASISSVSRLTLTSRTAEQTEAWQ 129 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G +++ ++P + GT +EV +LFF PAR FL++++ E I +V+RR+A+A Sbjct: 130 AYAQGREMAVEIQPASHPIGTTIEVANLFFNTPARRKFLRTDKTEFAHIDEVVRRIALAK 189 Query: 180 PKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P +SF+ S + ++ +R++ + G++FI ++ ++ + ++ L G+ Sbjct: 190 PNISFSLSHNGKIVRQYRKVQDNSVEQQQKRVAAICGDEFIQHSTYIDRQHGDLHLHGWV 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P R + Y ++NGR ++DK I IR AY ++I G YP V+ L++DP VDV Sbjct: 250 GSPALARLQNDLCYSYVNGRMMRDKTINHAIRQAYGDSIASGYYPAFVIFLDLDPTMVDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI---------------STSSVLSKKMI 342 NVHPAK +RF ++ +FI+Q + ++ + + Sbjct: 310 NVHPAKHEVRFHQGRLVHDFILQGVLNSLQQTQPTLELRNEVNEPLPSYVQDTNRQAAGQ 369 Query: 343 SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE--ESE 400 + F AP+ + ++ F + N +S++ + + + +++ Sbjct: 370 NIFVSQTAPQAAEFTQKNASRSSYTPKFERSNSVSSSAQKWYKELVGGDLHQTTPTIKTQ 429 Query: 401 ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH-------------ERLIFE------ 441 +T + H+ +SQ + + H + E F Sbjct: 430 STLVEPKTEPQTEHKTEAVSQKITQIAPLASHHSQALAIVKNQAVLIKEEENFYLLPLAT 489 Query: 442 --KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER---FGPNAIA 496 +++ K SQ LL P + L + + + E+L +LG + Sbjct: 490 LAELKLKLQLEKGQSQALLIPLNLSLDQQQTERWQQTKEELTKLGFSISEKQWQAQTRLT 549 Query: 497 IREIPAILSKKNIPQLLRDIIDE 519 + +P + ++N+ QLL + ++ Sbjct: 550 VLSVPQAVREQNLQQLLFALFNQ 572 >gi|320155085|ref|YP_004187464.1| DNA mismatch repair protein MutL [Vibrio vulnificus MO6-24/O] gi|319930397|gb|ADV85261.1| DNA mismatch repair protein MutL [Vibrio vulnificus MO6-24/O] Length = 664 Score = 395 bits (1014), Expect = e-107, Method: Composition-based stats. Identities = 171/642 (26%), Positives = 286/642 (44%), Gaps = 79/642 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLD+ +++++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDSGATKIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SRP Sbjct: 61 SGIVKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRPATQEQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYTEGRDMQVKLQPTAHPIGTTVEVVDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS T + + +R++ V G+ F+ +++ + + L G+ Sbjct: 181 SRFDVSITLRHNGKVIRQYRAAHNDLQAEKRLATVCGQAFVRCMLKIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLKPEQFAAYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRN----------------------------------------------- 310 NVHPAK +RF Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALASALAQSDSIEQPQINESAFHYQAEPEVAPQGSFP 360 Query: 311 ------PTIIRNFIIQSI---QKAINKKGISTSSVLSKKMISSFHQDNAPKTH------- 354 P + + I ++ +KA ++ + + L S ++ AP H Sbjct: 361 AESNEVPQAVYHAIEKAPAYPRKAGQEQQLQPVAPLESSFSSEQGREVAPAPHNERNAWM 420 Query: 355 ---LPKYATSLTNTQE----KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL- 406 P T+ +N E ++ + +LL + D S A+ Q Sbjct: 421 ESRSPARHTTSSNQSERYGEPAPSKQQVKAYAELLHTPDFPSQNVECHPSPSIASPVQEL 480 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 G A + + Q Y+++ T G ++ A I ++ D + SQ LL P + L Sbjct: 481 GKAVSVVAQRYLLTTTKAGCQLISLARAEFYRILGQLNGDKA--PLKSQPLLVPLSLKLE 538 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 +G EH + R+GI + A+ + +PA L ++N+ L+ D++ + Sbjct: 539 KGLVHAAQEHQDRFARMGILFKMRNEKALMVMGVPAPLRQQNLQLLIPDLLSYAASQAQK 598 Query: 527 YTLQDRIENILATMACYGS-IRSGRKMQSIEMNRLLREMEKN 567 L + +A + ++S + E +++ E+E+ Sbjct: 599 EELAQNDTAMAQWLALRVAKVKSHYTLS--EAIQIISELEQL 638 >gi|52425571|ref|YP_088708.1| DNA mismatch repair protein [Mannheimia succiniciproducens MBEL55E] gi|81825511|sp|Q65SD7|MUTL_MANSM RecName: Full=DNA mismatch repair protein mutL gi|52307623|gb|AAU38123.1| MutL protein [Mannheimia succiniciproducens MBEL55E] Length = 631 Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats. Identities = 170/596 (28%), Positives = 288/596 (48%), Gaps = 64/596 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L ++ NQIAAGE++ERP+ +KEL+ENSLDA +SR++ I GG + +I DNG Sbjct: 1 MPIHILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIQIDIENGGATLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A+ RH TSKIS DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 LGIAKEDLSLALARHATSKISCLDDLEAILSLGFRGEALASISSVSRLTLTSRTAEQKEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++E+ E I +V+RR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTEKTEFAHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A P+++FT + + +R+S + GEDF+ NA++++ K + + L G+ Sbjct: 181 AKPQIAFTLTHNGKILRQYKSAVEIEQKLKRVSAICGEDFVQNALQIDWKHDNLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P F+R + Y ++NGR ++DK I IR AY + + +YP VL L++DP +VDV Sbjct: 241 AVPNFHRPQNDLSYSYVNGRMIRDKVINHAIRQAYGDYLTNEQYPAFVLYLDLDPNEVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAIN-------KKGISTSSVLSKKMISSFHQ--- 347 NVHP K +RF +I +FI Q + A+ + S+ ++ +++H Sbjct: 301 NVHPTKHEVRFHQARLIHDFICQGVGNALQSEQADFARYDTPASADEIQEPAANWHSSLI 360 Query: 348 ------------------------------------DNAPKTHLPKYAT-SLTNTQEKLF 370 ++P ++T S++ T++KL+ Sbjct: 361 KPNRSAAGHNIFESASDKNISGANTYSHGSAKINRFSTKFAENIPHFSTKSVSKTEQKLY 420 Query: 371 -----LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG 425 + + ++ ++ ++S Q + A + ++ Q Sbjct: 421 GNLLTTPAEAKKNTAINAESENSFEKNVSTPQQSTQLSGQFLHSLALVKNQALLLQQGQD 480 Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 ++ A ++L FE I Q LL P + L E + A + + G Sbjct: 481 FYLLPL-AKLQKLKFE---LTLQQPDIAQQPLLIPILFRLNERQLAQWQKQKNFFLQSGF 536 Query: 486 KA-ERFGPNAIAIREIPAILSKKNIPQLLRDIIDE----IIDSSTTYTLQDRIENI 536 + E + I + ++P+ L ++N+ + +++E I D T Q ++ I Sbjct: 537 EFDENPAQHRITLNKVPSCLRQQNLQGCVIRLLEENHEKISDFLTALCNQLQLNEI 592 >gi|292656068|ref|YP_003535965.1| DNA mismatch repair protein MutL [Haloferax volcanii DS2] gi|291371246|gb|ADE03473.1| DNA mismatch repair protein mutL [Haloferax volcanii DS2] Length = 563 Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats. Identities = 160/614 (26%), Positives = 265/614 (43%), Gaps = 80/614 (13%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L + ++IAAGE++ RP+ + ELIEN+LDA + VE + G G ++ D+G G Sbjct: 2 IHRLDPETRSKIAAGEVVARPASVVVELIENALDAGAETVEIDVDGDGTDRIRVADDGRG 61 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSI-GAVSHLTLMSRPPQNNTGA 119 M + +AV+RH TSK+ +DD + T GFRGEALPSI A + L L + + G Sbjct: 62 MAEADAALAVERHTTSKLAAADDLETVETLGFRGEALPSIAAAAARLELTTN-DGSPRGT 120 Query: 120 QIAIS-------GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 ++ + GE+ +V P GT V+V LF PAR L S + E ++ V+ Sbjct: 121 RVVVDGGENAPGGERDKTVSPAGRARGTTVDVTGLFADRPARRKSLASSKAEFARVSAVV 180 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--------AVEL 224 R A+ P V F F + + V G D ++ VE Sbjct: 181 TRYALTRPDVRFVLRHDGRETLT---TPGTDRFADALLAVYGRDAASHASTFDAAREVEA 237 Query: 225 NEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 ++ + + G P R + +V +NGR + + + + Y +P GR PV Sbjct: 238 AGETATVEVDGALCHPEVTRSRRDHVHVSVNGRALAEPRLRRAVADGYGTLLPDGREPVG 297 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 V+ L + P VD NVHPAK + FR+ + + S++ A++ + S ++ + SS Sbjct: 298 VVRLRLPPAWVDHNVHPAKDEVGFRDADAVAEAVEASVRDALSTADLRRSGEVAMDLDSS 357 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 P A S+ + Sbjct: 358 L---------APVEAASV-----------------------------------------F 367 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 + Y++ + D L++VDQHAAHER+ +E++R+ S I S + P + Sbjct: 368 DDLRVIGRFRGLYLLCEADDELLVVDQHAAHERINYERLREAVESAGIDSAAVDPPATVS 427 Query: 465 LLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 L + AL+ + + + +LG + E G + +PA L + P L D++ ++ Sbjct: 428 LSPADAALLDANRDPVEKLGFRVVEFGEGGGTGTYRVEAVPAPLGRPFAPDALADVVADV 487 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + +L +AC+ SI++G + E RL+ + C HGRPT Sbjct: 488 ASGDHADP----RDELLKDLACHPSIKAGDDLTDDEATRLVERLGSCETPYTCPHGRPTV 543 Query: 581 IKLKLSDIEKLFGR 594 + + + FGR Sbjct: 544 LSIDEETFVRGFGR 557 >gi|165977401|ref|YP_001652994.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|238687528|sp|B0BTY3|MUTL_ACTPJ RecName: Full=DNA mismatch repair protein mutL gi|165877502|gb|ABY70550.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 622 Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats. Identities = 163/559 (29%), Positives = 268/559 (47%), Gaps = 45/559 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG +I DNG G Sbjct: 6 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNGCG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS LTL SRP Q Sbjct: 66 IGKQDLALALARHATSKISSLEDLEMILSLGFRGEALASISSVSRLTLTSRPAGQAEAWQ 125 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G ++ ++P + GT +EV +LFF PAR FL++++ E I +V+RR+A+A Sbjct: 126 AYAQGREMEVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFTHIDEVVRRIALAK 185 Query: 180 PKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + FT + + ++ R++ + G+DFI NA+ ++ + ++ L G+ Sbjct: 186 PNIGFTLTHNGKTVRQYRKVQDNSVEQQQRRVAAICGDDFIQNAIHIDWQHGDLHLHGWI 245 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET-IPLGRYPVVVLLLEIDPRQVD 296 G+P +R + Y ++NGR ++DK I IR AY T +P G YP V+ L+IDP QVD Sbjct: 246 GLPNISRPQNDLCYSYVNGRMMRDKTINHAIRQAYEATDMPEGNYPAFVVFLDIDPSQVD 305 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-------- 348 VNVHPAK +RF ++ +FI+Q +Q A+ + + + + S+ ++ Sbjct: 306 VNVHPAKHEVRFHQGRLVHDFILQGVQTALQGQAEIDLTHQVNEPLPSYQRNTNRMAAGG 365 Query: 349 -----------------NAPKTHLPKYAT---SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 +H+P Y+ ++ + +K + + N D Sbjct: 366 NSFLASQQAVEFTENFAKPTASHMPNYSPRTSGVSKSAQKWYGELVSQPQNQSDNIQDLI 425 Query: 389 YSEDN--------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 + N + E + A I+ L Q Sbjct: 426 EPKANFAPVIFAQEIDEAEPKPTQVVSAAIGHWQPLAIVQNQALLLKAEQQFYLLSLEKL 485 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER---FGPNAIAI 497 ++R TK SQ LL P + L E + L LG G +++ Sbjct: 486 ARLRFQTQLTKGESQALLIPLNLSLDEQQTQRWQTLKTPLAELGFAISEKTWQGQIRLSV 545 Query: 498 REIPAILSKKNIPQLLRDI 516 ++P +L ++N+ Q+L + Sbjct: 546 TQVPRLLREQNLQQILLSL 564 >gi|27364692|ref|NP_760220.1| DNA mismatch repair protein [Vibrio vulnificus CMCP6] gi|31076809|sp|Q8DCV0|MUTL_VIBVU RecName: Full=DNA mismatch repair protein mutL gi|27360837|gb|AAO09747.1| DNA mismatch repair protein MutL [Vibrio vulnificus CMCP6] Length = 664 Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 169/642 (26%), Positives = 285/642 (44%), Gaps = 79/642 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLD+ +++++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDSGATKIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SRP Sbjct: 61 SGIVKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRPATQEQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYTEGRDMQVKLQPTAHPIGTTVEVVDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS T + + +R++ V G+ F+ +++ + + L G+ Sbjct: 181 SCFDVSITLRHNGKVIRQYRAAHNDLQAEKRLATVCGQAFVRCMLKIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLKPEQFAAYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRN----------------------------------------------- 310 NVHPAK +RF Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALASALAQSDSIEQPQINESAFHYQAEPEVAPQGSFP 360 Query: 311 ------PTIIRNFIIQSI---QKAINKKGISTSSVLSKKMISSFHQDNAPKTH------- 354 P + + I ++ +KA ++ + + L S ++ +P H Sbjct: 361 AESNEVPQAVYHAIEKAPAYPRKAGQEQQLQPVAPLESSFSSEQGREVSPAPHNERKAWM 420 Query: 355 ---LPKYATSLTNTQE----KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL- 406 P T+ +N E ++ + +LL + D S A+ Q Sbjct: 421 ESRSPARHTTSSNQSERYGEPAPSKQQVKAYAELLHTPDFPSQNVECHPSPSIASPVQEL 480 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 G A + + Q Y+++ T G ++ A ++ D + SQ LL P + L Sbjct: 481 GKAVSVVAQRYLLTTTKAGCQLISLARAEFYRTLGQLNGDKA--PLKSQPLLVPLSLKLE 538 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 +G EH + R+GI + A+ + +PA L ++N+ L+ D++ + Sbjct: 539 KGLVHAAQEHQDRFARMGILFKMRNEKALMVMGVPAPLRQQNLQLLIPDLLSYAASQAQK 598 Query: 527 YTLQDRIENILATMACYGS-IRSGRKMQSIEMNRLLREMEKN 567 L + +A + ++S + E +++ E+E+ Sbjct: 599 EELAQNDTAMAQWLALRVAKVKSHYTLS--EAIQIISELEQL 638 >gi|225619059|ref|YP_002720285.1| D mismatch repair protein [Brachyspira hyodysenteriae WA1] gi|225213878|gb|ACN82612.1| D mismatch repair protein [Brachyspira hyodysenteriae WA1] Length = 615 Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 174/617 (28%), Positives = 303/617 (49%), Gaps = 31/617 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I KL + + N+IAAGE+IERP+ +KEL+EN++D+ +S +E + G + D+G G Sbjct: 5 IMKLQQSVANRIAAGEVIERPASMLKELLENAIDSGASNIEVSVEEAGIKSMIVEDDGNG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+P+A+ H TSKI +D +I+T GFRGEAL SI V++L ++S+ + + G + Sbjct: 65 IRFDELPLAITHHATSKIHSIEDLDSIYTLGFRGEALASISDVTNLEIVSKSVEESNGGK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + G KI +P A + GT + ++LFF IPAR FLK E L+ +V A+ P Sbjct: 125 IVVEGGKIIEHKPAAASQGTKIIAKNLFFNIPARYKFLKHISREFFLVKEVFDMEALVQP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQ-VIGEDFINNAVELNEKSNEITLQGYTGI 239 K+S ++ ERI + + N +E+ + +++ + G Sbjct: 185 KISMKLKNNGK---VVSSYIKVDTLKERIENYISDSNIFRNLIEVEIEKDDVLIYGLFSN 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 ++ ++F+N R ++++ + I+ AY+ IP RYP L + ID ++DVNV Sbjct: 242 SKISQSMRKNNFIFLNNRPIENRVLAYAIKNAYSNAIPKERYPFFFLYINIDSSKIDVNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ--DNAPKTHLPK 357 HP+K +R +N I + +I IN S + + + Sbjct: 302 HPSKKEVRIKNEREISGILYNTIVNNINSGNNLDSVNIEVDLDKDITPTFPIQQNNNYNT 361 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ------------ 405 Y TS NTQ ++ + S ++ D E+++ +EE+ Sbjct: 362 YNTSNYNTQSSNEIKYDNTSYSNNNYDKDDLNLENSNIIEENNLNKEINLNNNNFSSNNI 421 Query: 406 ----LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 A Q+ +YI+++ + I+DQHAA+ERL +E++ + S KI + LL P Sbjct: 422 EFGEYTRAIGQVFSSYIVAERGGEMYIIDQHAAYERLNYERIYKTLMSKKIEYEKLLIPC 481 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNA----IAIREIPAILSKKNIPQLLRDII 517 I+ + E ++ E + LGIK E ++ IP + I ++++DI+ Sbjct: 482 EIEYRDYEIDILNASKESIESLGIKFEANSKHSIIIEDIPIYIP---RNQKIEKIIKDIL 538 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D I L+ I++ +T++C S ++G K+ + +M LL +E+ + C HGR Sbjct: 539 DIYISKGDNNNLEKVIKHTCSTISCKYSPKAGDKLSNSDMQTLLDLLEEENILTNCPHGR 598 Query: 578 PTFIKLKLSDIEKLFGR 594 P ++L ++K F R Sbjct: 599 PFVLRLSKEYLDKKFFR 615 >gi|37681257|ref|NP_935866.1| DNA mismatch repair protein [Vibrio vulnificus YJ016] gi|61214242|sp|Q7MH01|MUTL_VIBVY RecName: Full=DNA mismatch repair protein mutL gi|37200008|dbj|BAC95837.1| DNA mismatch repair enzyme [Vibrio vulnificus YJ016] Length = 664 Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 170/642 (26%), Positives = 285/642 (44%), Gaps = 79/642 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLD+ +++++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDSGATKIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SRP Sbjct: 61 SGIVKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRPATQEQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYTEGRDMQVKLQPTAHPIGTTVEVVDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS T + + +R++ V G+ F+ +++ + + L G+ Sbjct: 181 SRFDVSITLRHNGKVIRQYRAAHNDLQAEKRLATVCGQAFVRCMLKIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLKPEQFAAYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRN----------------------------------------------- 310 NVHPAK +RF Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALASALAQSDSIEQPQINESAFHYQAEPEVAPLGSFP 360 Query: 311 ------PTIIRNFIIQSI---QKAINKKGISTSSVLSKKMISSFHQDNAPKTH------- 354 P + + I ++ +KA ++ + + L S ++ AP H Sbjct: 361 AESNEVPQAVYHAIEKAPAYPRKAGQEQQLQPVAPLESSFSSEQGREVAPAPHNERNAWM 420 Query: 355 ---LPKYATSLTNTQE----KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL- 406 P T+ +N E ++ + +LL + D S A+ Q Sbjct: 421 ESRSPARHTTSSNQSERYGEPAPSKQQVKAYAELLHTPDFPSQNVECHPSPSIASPVQEL 480 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 G A + + Q Y+++ T G ++ A I ++ D + SQ LL P + L Sbjct: 481 GKAVSVVAQRYLLTTTKAGCQLISLARAEFYRILGQLNGDKA--PLKSQPLLVPLSLKLE 538 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 +G EH + R+GI + A+ + +PA L ++N+ L+ D++ + Sbjct: 539 KGLVHAAQEHQDRFARMGILFKMRNEKALMVMGVPAPLRQQNLQLLIPDLLSYAASQAQK 598 Query: 527 YTLQDRIENILATMACYGS-IRSGRKMQSIEMNRLLREMEKN 567 + +A + ++S + E +++ E+E+ Sbjct: 599 EEQAKNDTAMAQWLALRVAKVKSHYTLS--EAIQIISELEQL 638 >gi|170728497|ref|YP_001762523.1| DNA mismatch repair protein [Shewanella woodyi ATCC 51908] gi|238688669|sp|B1KHV0|MUTL_SHEWM RecName: Full=DNA mismatch repair protein mutL gi|169813844|gb|ACA88428.1| DNA mismatch repair protein MutL [Shewanella woodyi ATCC 51908] Length = 614 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 163/558 (29%), Positives = 269/558 (48%), Gaps = 44/558 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ IKEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MTIQILSPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIDKGGSKLIKIQDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ +A+ RH TSK+S DD I +FGFRGEAL SI +VS LTL SR + Sbjct: 61 SGIPKSELNLALSRHATSKLSTLDDLDAILSFGFRGEALASISSVSRLTLTSRTAEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ P A GT +E DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAYAEGSDMAVKVIPAAHPVGTTIEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P++ FT + + R++Q+ G++F A+E++ + +TL GY Sbjct: 181 VKPEIHFTLKHNGKQVRNYRPANNQDQYLMRLAQICGKNFAEQAIEIDCQHEGLTLSGYI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F ++ + ++NGR ++D+ + +R A++E G VL+LEI P QVDV Sbjct: 241 QSPFFTSPASDTQFFYVNGRLIRDRLVNHAVRQAFSEH-GTGELASYVLMLEIAPHQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT---- 353 NVHPAK +RF + ++I+Q++Q A+ + ++ S+ +K++ D K Sbjct: 300 NVHPAKHEVRFHQSRYVHDYILQALQSALMQVARASISLPEEKLVEFVEDDWHSKPLSTG 359 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----------DPTYSEDNDPVEESEATH 403 + + S TQ K + + S + + + SE Sbjct: 360 RVSEADPSNYATQSKFDEKPRESGSQGQSSSISAPSSYSRGGEYSARSQPELPSASEIAS 419 Query: 404 YQLGI-------------------ACAQIHQNYIISQTTD-GLVIVDQHAAHERLIFEKM 443 Y + + Y + + L+ +D A + + ++ Sbjct: 420 YTQLLKTPQTAQASKLVNSDLKTPMPPVLAGQYWVYAGDELSLLPIDIVA---KWLVKRD 476 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE-RFGPNAIAIREIPA 502 + SQ LL P I + E I E ++ L +LGI+ R G + I+++P Sbjct: 477 ILAKIDNGLVSQPLLMPVSIKVDEDWLNTIDEREQLLRQLGIEITIRLGQ--LIIKKVPP 534 Query: 503 ILSKKNIPQLLRDIIDEI 520 L + + ++ +++ + Sbjct: 535 YLRQSQLVTVIPELLQWV 552 >gi|315651394|ref|ZP_07904419.1| DNA mismatch repair protein MutL [Eubacterium saburreum DSM 3986] gi|315486353|gb|EFU76710.1| DNA mismatch repair protein MutL [Eubacterium saburreum DSM 3986] Length = 652 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 154/657 (23%), Positives = 278/657 (42%), Gaps = 73/657 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + +++IAAGE++ERP+ +KE++ENS+DA SS + I GG +ITDNG G Sbjct: 2 INILDKNTVDKIAAGEVVERPASIVKEILENSIDAGSSLITVEIKNGGTDLIRITDNGCG 61 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + + E+ A RH TSKI D +I + GFRGEAL SI AVS ++++ TG + Sbjct: 62 IAASEVKKAFLRHATSKIISDKDLISIKSLGFRGEALSSIAAVSRCEMITKTKDELTGVR 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + GT + +RD+F+ PAR FLKS E I++++ ++A++ Sbjct: 122 YCIEGGTEVEYEEIGAPDGTSIIIRDIFYNTPARRKFLKSASTEGAHISELVEKLAMSNT 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F F + + + N +GN + + Q+ G++ ++ K + I + G P Sbjct: 182 NIAFKFISNGQIKLQTN---GSGNLKDIVYQLYGKEISKALCNVDYKKDGIKISGVVARP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + N +F+NGR ++D I I + + + +YP L E+ VDVNVH Sbjct: 239 EVTRSSRNLENIFVNGRYIKDNIISKAIEDGFGDRLMQHQYPFCALKFEL--DGVDVNVH 296 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +RF + + + +++++ + + K + P+ K Sbjct: 297 PRKMEVRFSDRNFVYDNTKEAVEEIFTAQSAIREVPIGKSSNEKKIFVSTPEPFENKRRD 356 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP-----VEESEATHYQLGIACAQIHQ 415 Q ++ S++D + P + N +++ ++ L I I Sbjct: 357 LTGEFQNTFKDKKTYKSSDDEINWTVPKENMYNPRDDMSLIKDEKSNSMYLDINDFNILN 416 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM- 474 I +D V D ++ + + ++++ + + + ++ Sbjct: 417 TDISDTKSDTSVSTDNAVCNKNFEVGNVSNNIKPSQLSFFDSESKKYMKVVGQVFDTYWI 476 Query: 475 -EHDEDL--------------HRLGIKAERFGPNAIAIREI--PAILSKKNIPQ------ 511 + +++L RL + N ++ + I P I++ +I Q Sbjct: 477 VQLEKELYIIDQHAAHEKVMYERL---LKESKENRLSSQMINPPVIVTLTDIEQNVLKDH 533 Query: 512 --LLRDIIDEIIDSST-------------TYTLQDRIENIL------------------- 537 R I +I + + + +L Sbjct: 534 MDEFRKIGFDIEEFGGKEYKINSIPNIFPSIPKAELFNEMLSDSTNYDIISPSELILAKV 593 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 A+MAC +I+ ++ +E N L E+ N C HGRPT IK+ +IEK F R Sbjct: 594 ASMACKAAIKGNMRISLLEANELFDELLSLDNPYNCPHGRPTVIKMTKQEIEKKFKR 650 >gi|288937531|ref|YP_003441590.1| DNA mismatch repair protein MutL [Klebsiella variicola At-22] gi|288892240|gb|ADC60558.1| DNA mismatch repair protein MutL [Klebsiella variicola At-22] Length = 619 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 162/614 (26%), Positives = 275/614 (44%), Gaps = 61/614 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +V+ LTL SR + Sbjct: 61 SGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQQEA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q ++ +V+P A GT +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + + + +G R+ + G F+ +A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLNHNGKVIRQYRAVAQDGQRERRLGTICGAAFLEHALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPLHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHPAK +RF ++ +FI Q + + ++ + + +N Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLDAPLAEKDDPPTPRQMPENRIAAGGN 360 Query: 357 KYATS-----------------------------LTNTQEKLFLQENRLSTNDLLPSDDP 387 ++A + Q Q+ L L P Sbjct: 361 QFARPSEAREAATRFSITSSREPAASGGSSGGASWPHAQPGYQKQQGALYRQLLDTPAAP 420 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 ++ + E G + + + + L ++ A L ++ Sbjct: 421 RPAQPSAAPAELAGHSQSFGRVLTIVGGDCALLEREGSLALLSLTVAERWLRQAQL--TP 478 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + + +Q LL P + + EGE + L +LGI+ + +R +P L ++ Sbjct: 479 GTEAVCAQPLLIPLRLKVTEGEKRALAAAQSALAQLGIEL-HTDALHVTVRAVPLPLRQQ 537 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN-------RL 560 N+ L+ ++I + + + NI MA R + S + + L Sbjct: 538 NLQILIPELIGYLAQQNAFD-----VGNIAQWMA--------RNLTSEQASWNMAQAIAL 584 Query: 561 LREMEKNPNSSQCN 574 L ++E+ C Sbjct: 585 LADVERL-----CP 593 >gi|37528402|ref|NP_931747.1| DNA mismatch repair protein [Photorhabdus luminescens subsp. laumondii TTO1] gi|81833855|sp|Q7MYT9|MUTL_PHOLL RecName: Full=DNA mismatch repair protein mutL gi|36787840|emb|CAE16955.1| DNA mismatch repair protein [Photorhabdus luminescens subsp. laumondii TTO1] Length = 631 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 164/622 (26%), Positives = 279/622 (44%), Gaps = 65/622 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG ++ DNG Sbjct: 1 MAIKILPPQLANQIAAGEVVERPASVVKELVENSLDAGANRIDIEIERGGVKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + + Sbjct: 61 CGINHQELALALARHATSKIATLDDLEAIISMGFRGEALASISSVSRLTLTSRTEEQHEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A G+ VEV DLF+ PAR FL++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V + + R+ + G F+ A+ L+ + ++++++G+ Sbjct: 181 ARLDVLINLHHNGKLVRQYRPAKDESQYERRLVSICGTAFMQRALSLSWQHDDLSIKGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++NGR ++D+ I IR AY + + + P VL L +DP QVDV Sbjct: 241 VDPMNTEASGDIQYCYVNGRMMRDRLINHAIRQAYQDLLRGEQQPAYVLYLGVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-SVLSKKMISSFHQDNAPKT--- 353 NVHPAK +RF ++ +FI Q + + ++G + + ++ +N P Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQGVIAVLKQRGSGAELDIACCEPAPAWEPENRPSAGGN 360 Query: 354 --HLPKYATSLTNTQEKLFLQ-----------ENRLSTNDLLPSDDPTYSEDNDPVEESE 400 ATS+ + K L ENR D + E E Sbjct: 361 HFSRQSNATSVAASSPKEVLSSKGNMGGSRGGENRQYHGDHYQKRQGEVYQKLMQSEPEE 420 Query: 401 ATH-------------------------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 + G + Y + ++ GL ++ A Sbjct: 421 KRELFPARTAPVMAEKATSAPVQVKNSNHSFGKVLSIYSPCYALIESPLGLGLLSLPVAE 480 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 L ++ + SQ LL P + L + E + + + L GI+A A Sbjct: 481 RWLRQAQL--APTEQGLKSQPLLIPLKLSLSKEEAGALNRYSDLLGSFGIEASVSHGKA- 537 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG---RKM 552 + + L ++N+P+L+ +++ + + E ++ +A + G Sbjct: 538 TLCAVSLPLRQQNLPKLIPELLGYLAQQPSASA-----EQVVTWLARH----IGSEYETW 588 Query: 553 QSIEMNRLLREMEKNPNSSQCN 574 + +LL ++E+ C Sbjct: 589 NVAQAVQLLADVERL-----CP 605 >gi|303250340|ref|ZP_07336539.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650810|gb|EFL80967.1| DNA mismatch repair protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 622 Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 164/559 (29%), Positives = 268/559 (47%), Gaps = 45/559 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG +I DNG G Sbjct: 6 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNGCG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS LTL SRP Q Sbjct: 66 IGKQDLALALARHATSKISSLEDLEMILSLGFRGEALASISSVSRLTLTSRPAGQAEAWQ 125 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G ++ ++P + GT +EV +LFF PAR FL++++ E I +V+RR+A+A Sbjct: 126 AYAQGREMEVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFTHIDEVVRRIALAK 185 Query: 180 PKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + FT + + ++ R++ + G+DFI NA+ ++ + ++ L G+ Sbjct: 186 PNIGFTLTHNGKTVRQYRKVQDNSVEQQQRRVAAICGDDFIQNAIHIDWQHGDLHLHGWI 245 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET-IPLGRYPVVVLLLEIDPRQVD 296 G+P +R + Y ++NGR ++DK I IR AY T +P G YP V+ L+IDP QVD Sbjct: 246 GLPNISRPQNDLCYSYVNGRMMRDKTINHAIRQAYEATDMPEGNYPAFVVFLDIDPSQVD 305 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-------- 348 VNVHPAK +RF ++ +FI+Q +Q A+ + + + + S+ +D Sbjct: 306 VNVHPAKHEVRFHQGRLVHDFILQGVQTALQGQAEIDLTHQVNEPLPSYQRDTNRMAAGG 365 Query: 349 -----------------NAPKTHLPKYAT---SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 +H+P Y+ ++ + +K + + N D Sbjct: 366 NSFLASQQAVEFTENFAKPTASHMPNYSPRTSGVSKSAQKWYGELVSQPQNQSDNIQDLI 425 Query: 389 YSEDN--------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 + N + E + A I+ L Q Sbjct: 426 EPKANFAPVIFAQEIDEAEPKPTQVVSAAIGHWQPLAIVQNQALLLKAEQQFYLLSLEKL 485 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER---FGPNAIAI 497 ++R TK SQ LL P + L E + L LG G +++ Sbjct: 486 SRLRFQTQLTKGESQALLIPLNLSLDEQQTQRWQTLKTPLVELGFAISEKTWQGQIRLSV 545 Query: 498 REIPAILSKKNIPQLLRDI 516 ++P +L ++N+ Q+L + Sbjct: 546 TQVPRLLREQNLQQILLSL 564 >gi|224536053|ref|ZP_03676592.1| hypothetical protein BACCELL_00917 [Bacteroides cellulosilyticus DSM 14838] gi|224522336|gb|EEF91441.1| hypothetical protein BACCELL_00917 [Bacteroides cellulosilyticus DSM 14838] Length = 564 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 150/564 (26%), Positives = 254/564 (45%), Gaps = 56/564 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + NQIAAGE+I+RP+ IKEL+EN++DAE+ + ++ GK+ Q+ D+G G Sbjct: 5 IHLLPDSVANQIAAGEVIQRPASVIKELVENAIDAEAQEIHVLVTDAGKTCIQVIDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + +A +RH TSKI D + T GFRGEAL S+ AV+ + L +R G + Sbjct: 65 MSETDARLAFERHATSKIRQATDLFALRTMGFRGEALASVAAVAEVELKTRMANEELGTR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I+G K+ S V+ G+ +++LFF IPAR FLK+ E + I R+A+ +P Sbjct: 125 IVIAGSKVESQEAVSCPKGSNFSIKNLFFNIPARRKFLKANSTELSNILTEFERIALVHP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F + + + + +RI V G+ + + ++ + + + G+ P Sbjct: 185 EVAFYLYSNDTELFNLPAMP----LRQRILAVFGKKLNQHLLSVDVDTTMVKVSGFVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R Y F+NGR ++ + + AY + IP G + ++DP +DVN+H Sbjct: 241 ETARKKGAHQYFFVNGRYMRHPYFHKAVMDAYEQLIPAGEQISYFIYFDVDPANIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS---KKMISSFHQDNAPKTHLPK 357 P K+ I+F N I + ++++++ K S I +F Q + Sbjct: 301 PTKTEIKFENEQAIWQIVSAAVKESLGKFNAVPSIDFDTEGMPDIPAFDQTRPIEPPKVH 360 Query: 358 YATSLTN--------------------TQEKLFLQENRLSTNDLLPSDDP---------- 387 Y + E L+ + S + ++P Sbjct: 361 YNSDFNPFKTSSASSYSGGGSYSRPKVDWEGLYDGLEKASKMNTPMEEEPFVDETDWTSA 420 Query: 388 -----TYSEDNDPVEESEATHYQ------------LGIACAQIHQNYIISQTTDGLVIVD 430 E V+E+E G Q +I++ GL+++D Sbjct: 421 PASVDMSEERTPYVQETETVSSPSASLYTNEPAVEKGAQHFQFKGRFILTSVKSGLMLID 480 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QH AH R++FE+ + SQ +L PEI+ L E A++ ED +G + Sbjct: 481 QHRAHIRVLFERYMNQIRQKQGVSQGVLFPEIVQLPASEAAVLESIMEDFSAVGFELTPL 540 Query: 491 GPNAIAIREIPAILSKKNIPQLLR 514 G + AI IP+ + N +L+R Sbjct: 541 GGGSYAINGIPSGIEGLNPVELVR 564 >gi|262275157|ref|ZP_06052968.1| DNA mismatch repair protein MutL [Grimontia hollisae CIP 101886] gi|262221720|gb|EEY73034.1| DNA mismatch repair protein MutL [Grimontia hollisae CIP 101886] Length = 653 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 161/630 (25%), Positives = 275/630 (43%), Gaps = 68/630 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENS+DA ++R++ I GG +I DNG Sbjct: 1 MAIQILPARLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIEKGGSKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 SGIAKEELELALSRHATSKITCLDDLEAIISLGFRGEALASISSVSRLTLTSRTVTQSEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + V+P A GT VEV DLFF PAR FL++++ E I ++++R+A+ Sbjct: 121 WSAYAEGRDMAVKVKPAAHPVGTTVEVVDLFFNTPARRKFLRTDKTEFGHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ T + + + + +R++ V G F+ AVE++ + +TLQG+ Sbjct: 181 SRFDVAITLRHNGAIVRQYRAATNDVQREKRLAAVCGPQFVKTAVEVSLEHQGLTLQGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R + + F+N R ++DK I IR Y ++ ++ VL ++IDP QVDV Sbjct: 241 CTPEGARAQNDIQHCFVNKRMMKDKLINHAIRQGYEASLRPDQFAAYVLYIDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV--------------------- 336 NVHPAK +RF ++ +FI Q++ A+ + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVADALMQVTAEPEPISALNFADNETAGHPAQQAVEG 360 Query: 337 ---------LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + + + + + P A+ + + + D L P Sbjct: 361 DEGVKDTAYSNYPGQAEYSEWRPQASGQPARASGFSQSSAGRSSGGSSGQRCDFLSGSAP 420 Query: 388 TYSEDNDP---------------VEESEATHYQL---------------GIACAQIHQNY 417 + E N + E+ A G A ++ Y Sbjct: 421 SRREQNVYQSLMTTPVVPDPVREIAEASAVFTPSTPQAPVSTGHAAQGLGKALTVVNAKY 480 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 ++ Q +G+ ++D AA + RQ + +Q LL P+ + E L+ H+ Sbjct: 481 LLLQREEGIALLDLDAAAYLSVLGTFRQAGLEEGLKAQPLLIPQALPASAEELELVALHE 540 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 L + GI + + + + + N+ Q + ++ + S + + Sbjct: 541 PLLQQFGILLRKKSASQVMVMAVCQPFRHHNLQQFIPALMAFLTRSGKKLDVSSLSTWLT 600 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 +++ + LL E+E Sbjct: 601 G-----QAVQKTDVYSLSQSVTLLTELENC 625 >gi|307253647|ref|ZP_07535514.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306858883|gb|EFM90929.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 661 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 164/559 (29%), Positives = 268/559 (47%), Gaps = 45/559 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG +I DNG G Sbjct: 45 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNGCG 104 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS LTL SRP Q Sbjct: 105 IGKQDLALALARHATSKISSLEDLEMILSLGFRGEALASISSVSRLTLTSRPAGQAEAWQ 164 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G ++ ++P + GT +EV +LFF PAR FL++++ E I +V+RR+A+A Sbjct: 165 AYAQGREMEVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFTHIDEVVRRIALAK 224 Query: 180 PKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + FT + + ++ R++ + G+DFI NA+ ++ + ++ L G+ Sbjct: 225 PNIGFTLTHNGKTVRQYRKVQDNSVEQQQRRVAAICGDDFIQNAIHIDWQHGDLHLHGWI 284 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET-IPLGRYPVVVLLLEIDPRQVD 296 G+P +R + Y ++NGR ++DK I IR AY T +P G YP V+ L+IDP QVD Sbjct: 285 GLPNISRPQNDLCYSYVNGRMMRDKTINHAIRQAYEATDMPEGNYPAFVVFLDIDPSQVD 344 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-------- 348 VNVHPAK +RF ++ +FI+Q +Q A+ + + + + S+ +D Sbjct: 345 VNVHPAKHEVRFHQGRLVHDFILQGVQTALQGQAEIDLTHQVNEPLPSYQRDTNRMAAGG 404 Query: 349 -----------------NAPKTHLPKYAT---SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 +H+P Y+ ++ + +K + + N D Sbjct: 405 NSFLASQQAVEFTENFAKPTASHMPNYSPRTSGVSKSAQKWYGELVSQPQNQSDNIQDLI 464 Query: 389 YSEDN--------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 + N + E + A I+ L Q Sbjct: 465 EPKANFAPVIFAQEIDEAEPKPTQVVSAAIGHWQPLAIVQNQALLLKAEQQFYLLSLEKL 524 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER---FGPNAIAI 497 ++R TK SQ LL P + L E + L LG G +++ Sbjct: 525 SRLRFQTQLTKGESQALLIPLNLSLDEQQTQRWQTLKTPLVELGFAISEKTWQGQIRLSV 584 Query: 498 REIPAILSKKNIPQLLRDI 516 ++P +L ++N+ Q+L + Sbjct: 585 TQVPRLLREQNLQQILLSL 603 >gi|225629843|ref|ZP_03787757.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591304|gb|EEH12430.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 544 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 186/551 (33%), Positives = 299/551 (54%), Gaps = 24/551 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L K IN+IAAGE+IERP+ +KEL+EN++DA S ++ I GG++ +TD+G Sbjct: 1 MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSLEIDIKIESGGRNLIIVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ +A RH TSK+SD + I GFRGEALPSI AVS + L S+ + N Sbjct: 61 NGVEKNDLELAFMRHATSKLSDNELIEIKHLGFRGEALPSIAAVSRIKLSSKAREANEAW 120 Query: 120 QIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I+ GEKI + P +++ GT +EVRDLFF P RL FLK+E+ ET I D++ +A+ Sbjct: 121 SISYEGGEKIGELIPYSLSQGTHIEVRDLFFATPNRLKFLKTERAETQSIVDIVNNLAMI 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + FT ++ K+ + + R+ +V E+F +++E+NE+ + I L G+ Sbjct: 181 NYHIGFTLTSGNK---KLLKYAKQTSLFHRLCEV-EEEFQGSSLEINEEEDGIKLTGHIC 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 PT NRG + Q Y F+NGR ++D ++ +R AY + IP RYP L LEI QVDVN Sbjct: 237 KPTVNRGKSTQIYTFVNGRPIKDNLLIGAVRYAYHDFIPSDRYPFAALHLEIPYDQVDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP KS +RF+N +I + + + KA++++ + + K + + P + Sbjct: 297 VHPNKSEVRFQNKKLIYEIVTRGLIKALSRRIGTFLAHDQKMDSTLPDPFDKPNVQNERR 356 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT--------------HY 404 + N K F N + S Y+ ++E + Sbjct: 357 PSPFENQLIKEFASPNERVKSLSEQSKSFDYTGIQKLPSQAETMVLEKKVLEQVDLIESH 416 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 LG A Q++ YII++ D L+IVDQHAAHERL++E ++ + + Q LL PE ++ Sbjct: 417 PLGFARCQVYNTYIIAEVRDKLIIVDQHAAHERLVYECLK---QKSSVKRQKLLLPETVE 473 Query: 465 L-LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 + + +I + + L +G E N + ++EIPAIL ++ ++L +I+D + + Sbjct: 474 IKNQAGMEMIEVYKDKLFEMGFDIEIKSENKVIVKEIPAILGAIDVKEMLINIVDRLTEI 533 Query: 524 STTYTLQDRIE 534 T ++D++ Sbjct: 534 EDTLPVEDKVN 544 >gi|322515243|ref|ZP_08068241.1| DNA mismatch repair protein MutL [Actinobacillus ureae ATCC 25976] gi|322118748|gb|EFX90954.1| DNA mismatch repair protein MutL [Actinobacillus ureae ATCC 25976] Length = 629 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 160/559 (28%), Positives = 265/559 (47%), Gaps = 45/559 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG +I DNG G Sbjct: 13 IHFLPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNGCG 72 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS LTL SRP Q Sbjct: 73 ISKQDLALALARHATSKISSLEDLEMILSLGFRGEALASISSVSRLTLTSRPDGQAEAWQ 132 Query: 121 IAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G ++ ++P + GT +EV +LFF PAR FL++++ E I +V+RR+A+A Sbjct: 133 AYAQGREMAVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFAHIDEVVRRIALAK 192 Query: 180 PKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + FT + + ++ R++ + G++FI NA+ ++ + ++ L G+ Sbjct: 193 PNIGFTLTHNGKTVRQYRKVQDNSVEQQQRRVAAICGDEFIQNAIHIDWQHGDLHLHGWI 252 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET-IPLGRYPVVVLLLEIDPRQVD 296 G+P +R + Y ++NGR ++DK I IR AY T +P G YP V+ L+IDP QVD Sbjct: 253 GLPNISRLQNDLCYSYVNGRMMRDKTINHAIRQAYEATDMPAGNYPAFVVFLDIDPSQVD 312 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN------A 350 VNVHPAK +RF ++ +FI+Q +Q A+ + + + + S+ +D + Sbjct: 313 VNVHPAKHEVRFHQGRLVHDFILQGVQTALQGQAEIGLTNQVNEPLPSYQRDTNRIAAGS 372 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC 410 P+ A + K + + + V + + + Sbjct: 373 NSFLTPQQAVEFSGNFAKPTASRATSYSPRTATTSKSAQKWYGELVSQPQTQSDNIQDLI 432 Query: 411 ---AQIHQNYIISQ-----------------TTDGLVIVDQHA---AHERLIF------- 440 A + L IV A E+ + Sbjct: 433 ESKANFAPVIFAQEIDEAEPKLAQAVSAAIGHWQPLAIVQNQALLLRAEQQFYLLSLEKL 492 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER---FGPNAIAI 497 ++R K SQ LL P + L E + L LG G +++ Sbjct: 493 ARLRFIAQLEKGESQALLIPLNLSLDEQQTQRWQTLKTPLAELGFAISEKTWQGQIRLSV 552 Query: 498 REIPAILSKKNIPQLLRDI 516 ++P +L ++N+ Q+L + Sbjct: 553 TQVPRLLREQNLQQILLSL 571 >gi|190151315|ref|YP_001969840.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307264668|ref|ZP_07546248.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189916446|gb|ACE62698.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306869980|gb|EFN01744.1| DNA mismatch repair protein mutL [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 661 Score = 392 bits (1006), Expect = e-106, Method: Composition-based stats. Identities = 163/559 (29%), Positives = 268/559 (47%), Gaps = 45/559 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG +I DNG G Sbjct: 45 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIQIDIEKGGAQLIRIRDNGCG 104 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS LTL SRP Q Sbjct: 105 IGKQDLALALARHATSKISSLEDLEMILSLGFRGEALASISSVSRLTLTSRPAGQAEAWQ 164 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G ++ ++P + GT +EV +LFF PAR FL++++ E I +V+RR+A+A Sbjct: 165 AYAQGREMEVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFTHIDEVVRRIALAK 224 Query: 180 PKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + FT + + ++ R++ + G+DFI NA+ ++ + ++ L G+ Sbjct: 225 PNIGFTLTHNGKTVRQYRKVQDNSVEQQQRRVAAICGDDFIQNAIHIDWQHGDLHLHGWI 284 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET-IPLGRYPVVVLLLEIDPRQVD 296 G+P +R + Y ++NGR ++DK I IR AY T +P G YP V+ L+IDP QVD Sbjct: 285 GLPNISRPQNDLCYSYVNGRMMRDKTINHAIRQAYEATDMPEGNYPAFVVFLDIDPSQVD 344 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-------- 348 VNVHPAK +RF ++ +FI+Q +Q A+ + + + + S+ ++ Sbjct: 345 VNVHPAKHEVRFHQGRLVHDFILQGVQTALQGQAEIDLTHQVNEPLPSYQRNTNRMAAGG 404 Query: 349 -----------------NAPKTHLPKYAT---SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 +H+P Y+ ++ + +K + + N D Sbjct: 405 NSFLASQQAVEFTENFAKPTASHMPNYSPRTSGVSKSAQKWYGELVSQPQNQSDNIQDLI 464 Query: 389 YSEDN--------DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 + N + E + A I+ L Q Sbjct: 465 EPKANFAPVIFAQEIDEAEPKPTQVVSAAIGHWQPLAIVQNQALLLKAEQQFYLLSLEKL 524 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER---FGPNAIAI 497 ++R TK SQ LL P + L E + L LG G +++ Sbjct: 525 ARLRFQTQLTKGESQALLIPLNLSLDEQQTQRWQTLKTPLVELGFAISEKTWQGQIRLSV 584 Query: 498 REIPAILSKKNIPQLLRDI 516 ++P +L ++N+ Q+L + Sbjct: 585 TQVPRLLREQNLQQILLSL 603 >gi|269792640|ref|YP_003317544.1| DNA mismatch repair protein MutL [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100275|gb|ACZ19262.1| DNA mismatch repair protein MutL [Thermanaerovibrio acidaminovorans DSM 6589] Length = 560 Score = 392 bits (1006), Expect = e-106, Method: Composition-based stats. Identities = 156/594 (26%), Positives = 253/594 (42%), Gaps = 41/594 (6%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTS 65 L ++ +IAAGE+IERP +KEL+ENSLDA + RV ++ GGK+ + D+G G+ Sbjct: 3 LPPEVREKIAAGEVIERPLSVVKELLENSLDAGAKRVSVALSQGGKTSITVEDDGSGIPF 62 Query: 66 EEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAI 123 E++P+A+ RH TSKI DD I + GFRGEAL SI AVS L + SR G I Sbjct: 63 EDLPLALTRHATSKIRSVDDLYGIRSLGFRGEALASICAVSRLEIRSRRMDQELGGLIIA 122 Query: 124 SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 G +I V GT+V+V +LFF +PAR FLKS E I+ +++ M++ Sbjct: 123 EGGEIVLHERVPHPVGTVVKVEELFFNLPARRKFLKSPSAEVRRISQLLQEMSLVNFHRR 182 Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFN 243 S+ ++ + + + G D ++ S + G + Sbjct: 183 IQLSSDGRRVFE---SPGFESPRDAARHLWGCDPKEGFMDHQGLSCHLLWSG-------S 232 Query: 244 RGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAK 303 F+NGR + D + + I+ A G + V ++ + P +VDVNVHP K Sbjct: 233 GEGRGNLCFFVNGRRIHDPSLRAAIQGASGTL--GGDWVVFLV---VPPEEVDVNVHPTK 287 Query: 304 SYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLT 363 S +RF+ P + + + + I + +D P+ P + Sbjct: 288 SEVRFKRPRDVFSLVHRGALSVIGGGLGLDGPPGQPIPPARDRRDEPPQVKSPSVEDRMP 347 Query: 364 NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTT 423 F + ++ S A + + Y+I + Sbjct: 348 RLDGPSFGGPQDPAKRLVVGS--------------PLAEMVSQVRYVGEAGRGYLIYEFP 393 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 G++ +D HAA ER+ +EK+ + T + +++ EG + L L Sbjct: 394 RGVIFLDPHAAEERITYEKIVRGSQGG-----TQVLAFPVEIPEGLAMSLEGLWGPLEDL 448 Query: 484 GIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII---DSSTTYTLQDRIENILATM 540 G + +R G A+ + IP LS ++ + + + D Q ++ +A+ Sbjct: 449 GFRFDREGSGAMRMVGIPQHLSSFDVSPM--EWLRWCSSGGDQEEGSGRQVKLLERMASR 506 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC S++ G + RL E+ + C HGR TF L DIE GR Sbjct: 507 ACRRSMKLGDSLDRDGARRLFEELLRCSVPQACPHGRSTFFVLPWEDIESRLGR 560 >gi|332708296|ref|ZP_08428277.1| DNA mismatch repair protein MutL [Lyngbya majuscula 3L] gi|332352961|gb|EGJ32520.1| DNA mismatch repair protein MutL [Lyngbya majuscula 3L] Length = 589 Score = 392 bits (1006), Expect = e-106, Method: Composition-based stats. Identities = 164/614 (26%), Positives = 285/614 (46%), Gaps = 55/614 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + +++ IAAGE+I+ + ++ELIENSLDA ++R+ + + ++ DNG Sbjct: 1 MIIQTLPKNVVHLIAAGEVIDSIAAVVRELIENSLDAGATRITVSLWT-EQWRVRVADNG 59 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM + + A H TSKI SDD I + GFRGEAL S+ AV+ L ++SR P N+ G Sbjct: 60 TGMEVKNLQKAAFAHSTSKICSSDDLWKITSLGFRGEALHSLAAVAELEILSRCPGNSQG 119 Query: 119 AQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + I S ++ + A+ PGTIV V +LF +P R L + + +I + A+ Sbjct: 120 WRVIYNSQGQLRQIESAAIAPGTIVIVSNLFGKLPVRRQGLPPMAQQLRAVQTIIHQHAL 179 Query: 178 AYPKVSFTFSTIKSNRYKM-NFQSTNGNFPERISQVIGEDFINNAVELNEKSN------- 229 +P+VS+ + + + P+ I Q+ D VE+ + Sbjct: 180 CHPRVSWQVEQNGRPWFNLCPGHTAQQILPQIIKQLKESDLQPLTVEVPIPDSATEQQQD 239 Query: 230 --------EITLQGYTGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 ++ G+P +R + V NGR V+ + T+ T A T+P R Sbjct: 240 KSTKGNLGNGLMELVLGLPDRCHRRRPDWVKVATNGRIVRSHELEQTMITGLARTLPRDR 299 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK 340 YP+ L L I P Q+D N HPAK+ I + + + + ++I+ A+ T + L + Sbjct: 300 YPICFLHLRICPSQIDWNRHPAKTEIYLHSVSYWQEQVAEAIEHALR----ITPANLPES 355 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 + S+ + + T+ + + QE +D D+ +++ Sbjct: 356 IHSNRVKQLLKTSEARGGYTTSRSIELIPDTQE---------ITDKTDRKIDSKIDNKTD 406 Query: 401 ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 A AQ+H YI+++ G+ +++QH AHER+++E++ + + +L Sbjct: 407 DIGLIQLRAMAQLHNMYIVAEHPTGIWLIEQHIAHERVLYEELCDRWQLVPLEPPIILQH 466 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 E L R+G++ + FG A+R P +L +++ D + Sbjct: 467 LSPS-----------QVEQLQRIGLEVDPFGEELWAVRNAPELLRQRD------DCAKAL 509 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 ++ S LQ +AT AC +IR+G + EM +LL + +K + C HGRP + Sbjct: 510 LELSLGGDLQTAQ---VAT-ACRSAIRNGIPLSLSEMQQLLDQWKKTRHPRTCPHGRPIY 565 Query: 581 IKLKLSDIEKLFGR 594 + LK S + + F R Sbjct: 566 LSLKESALSRFFRR 579 >gi|237809130|ref|YP_002893570.1| DNA mismatch repair protein MutL [Tolumonas auensis DSM 9187] gi|259511152|sp|C4L9N1|MUTL_TOLAT RecName: Full=DNA mismatch repair protein mutL gi|237501391|gb|ACQ93984.1| DNA mismatch repair protein MutL [Tolumonas auensis DSM 9187] Length = 594 Score = 392 bits (1006), Expect = e-106, Method: Composition-based stats. Identities = 158/546 (28%), Positives = 254/546 (46%), Gaps = 12/546 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + NQIAAGE++ERP+ IKEL+ENSLDA ++R++ + GG ++ DNG Sbjct: 1 MPIQILPPILANQIAAGEVVERPASVIKELVENSLDAGANRIDVELEKGGCQLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ +A+ RH TSK++ DD +I + GFRGEAL SI +VS LTL SR + Sbjct: 61 GGICGTELALALARHATSKVATLDDLEHIASLGFRGEALASISSVSRLTLTSRTAGQHEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT VEV DLFF PAR FL+SE+ E I +++RR+A+ Sbjct: 121 WQAYAEGREMAVTVKPAAHPVGTTVEVLDLFFNTPARRRFLRSEKTEFAHIDELLRRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + T +R+ Q G +F+ A+ ++ + + L G+ Sbjct: 181 SRFDVAINLKHNGKLLRQYRPAQTESQQEQRVVQACGAEFMQAALRIDSEHLGLHLYGWL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 N Y ++NGR ++DK + IR AY+E P +L LE+DP QVDV Sbjct: 241 APQPLTAIN-EVQYCYVNGRMIRDKLLNHAIRQAYSECTGTSFQPAYILYLELDPHQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP+K +RF + +FI+Q I++A+ + I D P + L Sbjct: 300 NVHPSKHEVRFHESRQVHDFIVQVIRQALQTAYSENAPDAVFSGIEDAAPDY-PVSPLKN 358 Query: 358 YATSLTNTQEK----LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 AT ++L + L + + + A I Sbjct: 359 RATGQHQYSAPTGGYSSPSGSQLRSYGQLLTSELPSIPVSREAGSVAAPDNSDWPVLRLI 418 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 Q Y++S D L + D A + FN I L+ + + Sbjct: 419 QQRYLLSAQDDTLYLSDLVAIQSLQWLTQCNASFNEGLIAQPLLIPQRLDIARP--HEWL 476 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 E+ L +LG++ I I+ +PA+L + ++ + ++ + + Q+ Sbjct: 477 AEYGIWLQKLGLRYNTHKNKQIIIQAVPALLRQTDMASTIPAMLSLLERYPVALSHQEW- 535 Query: 534 ENILAT 539 + +AT Sbjct: 536 HSFIAT 541 >gi|257059802|ref|YP_003137690.1| DNA mismatch repair protein [Cyanothece sp. PCC 8802] gi|256589968|gb|ACV00855.1| DNA mismatch repair protein MutL [Cyanothece sp. PCC 8802] Length = 561 Score = 392 bits (1006), Expect = e-106, Method: Composition-based stats. Identities = 159/603 (26%), Positives = 269/603 (44%), Gaps = 65/603 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L +IN IAAGE+I+ + ++EL+EN+LDA ++R+ + Q+ DNG Sbjct: 4 PIQPLPLNVINLIAAGEVIDSIAAVVRELVENALDAGATRLVISLF-PESWRVQVADNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT ++ H TSKI DD I T GFRGEAL S+ V+ L + SR + G Sbjct: 63 GMTLADLRHCALPHSTSKIHQLDDLWKITTLGFRGEALHSLAQVADLEIASRCTSDGVGW 122 Query: 120 Q-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 S + P A+ PGTIV V +LF +P R L + + + I MA+ Sbjct: 123 CLRYQSSGEPLREEPTAIAPGTIVTVGNLFGKMPVRRQGLPAISTQLKAVQSFIENMALC 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERI---SQVIGEDFINNAVELNEKSNEIT--- 232 +P+V++ + ++ T ++ F++ V+ ++S + Sbjct: 183 HPQVTWQVWHNQRLWLNISPGKTPQQILPQLLKGVHYHDLQFVSQGVKSPQESTQKDLDL 242 Query: 233 LQGYTGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 ++ G+P +R + V INGR V+ + I TA++ T+P R+PV + L + Sbjct: 243 IEVTLGLPDRCHRHRPDWVKVGINGRIVRSPPVEQAILTAFSRTLPKDRFPVCFIHLTLC 302 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 P Q+D N HPAK I + R + S L ++ + Q A Sbjct: 303 PSQIDWNRHPAKVEIYLHSLDFWREQV----------------SKLIEQGLRLSPQTLAS 346 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 + L ++EK + + D ++ A A A Sbjct: 347 AAQNQRVGKLLKASEEKASYRVDA-----------------KDHQTDANAVGLMPLKAVA 389 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 Q+ YI+++ + GL +++QH AHER+++E ++ ++ + + +LT Sbjct: 390 QVRNTYIVAEHSTGLWLIEQHIAHERVLYETLQDNWQLIPLETPIILTK----------- 438 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 L E L R+G++ E FG A+R +P +LS + D + +++ S LQ Sbjct: 439 LSDNQVEQLARIGLEIEVFGEQLWAVRTVPKLLSTRE------DCPEALVELSIGGDLQT 492 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 + AC +IR+G M +M LL + + N + C HGRP ++ L+ S + + Sbjct: 493 AQVAV----ACRSAIRNGTPMTLSQMQELLDQWKTTRNPATCPHGRPIYLSLEESSLSRF 548 Query: 592 FGR 594 F R Sbjct: 549 FRR 551 >gi|119512095|ref|ZP_01631188.1| DNA mismatch repair protein [Nodularia spumigena CCY9414] gi|119463253|gb|EAW44197.1| DNA mismatch repair protein [Nodularia spumigena CCY9414] Length = 552 Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats. Identities = 158/598 (26%), Positives = 267/598 (44%), Gaps = 64/598 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L +++ I AGE+I+ + ++EL+ENSLDA ++R+ + + ++ DNG Sbjct: 4 TIQALPTEVVYLITAGEVIDSLASVVRELVENSLDAGATRIVVSLW-PQQWRIRVADNGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ A H TSKI +D I++ GFRGEAL S+ ++ L ++SRP N G Sbjct: 63 GMDEYDLQQAALAHSTSKIRSSEDLWKINSLGFRGEALHSLTTLADLEILSRPRAANVGW 122 Query: 120 QIAI-SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ G + + A+ PGT+V V LF R L + + + I+++A+ Sbjct: 123 RVVYGEGGQAVELEATAIAPGTVVTVSHLFGNCAVRRQGLPTSAQQMRGVQLAIQQIALC 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNF-PERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +P V++ + ++ ++ P+ + QV D +EL +++ L Sbjct: 183 HPHVTWQVWQNDRQWFSISPAASTAQLLPQILPQVRQGDLNEIKLELPIPHSQLNL--VV 240 Query: 238 GIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 G+P +R + V INGR V+ + T +A+ T+P RYP+ +L L I P Q++ Sbjct: 241 GLPDRCHRRRPDWVRVAINGRMVKLPELEQTTLSAFHRTLPRDRYPICLLNLTISPDQIN 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 N +PAKS I + I +I KA+ Sbjct: 301 WNRNPAKSEIYLNEIGYWQEQITTAIDKALR----------------------------- 331 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 +++ K +Q R+S Y + + E T A AQ+ Sbjct: 332 -----ISSANFKESVQTTRVSKILKAAEAKGGYHVNPENTPEHNNT-LHSLKAIAQLSNT 385 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 YI+ + +G+ +V+QH AHER+++E++ ++ I +L L Sbjct: 386 YIVVEHPNGMWLVEQHIAHERVLYEQICDNWQLVPIEPAIIL-----------YQLSAAQ 434 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L R+G+ E FG AIR IPA L ++ D D I++ S LQ + Sbjct: 435 VLQLQRIGLDIEPFGEQLWAIRTIPAPLQQRE------DRADAILELSWGGDLQVAQVAV 488 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC +IR+G M EM LL + ++ N C HGRP ++ L+ + + F R Sbjct: 489 ----ACRSAIRNGTPMTIPEMQTLLNQWQRTRNPRTCPHGRPIYLSLEEPALARFFRR 542 >gi|94987070|ref|YP_595003.1| DNA mismatch repair ATPase [Lawsonia intracellularis PHE/MN1-00] gi|94731319|emb|CAJ54682.1| DNA mismatch repair enzyme (predicted ATPase) [Lawsonia intracellularis PHE/MN1-00] Length = 648 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 194/656 (29%), Positives = 304/656 (46%), Gaps = 79/656 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L E + NQIAAGE++ERP+ IKEL+ENSLDA+++ +E ++ GG +F Q+ DNGF Sbjct: 7 PIILLPEALQNQIAAGEVVERPASIIKELVENSLDAKATDIEVIMENGGHTFIQVRDNGF 66 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMS---RPPQNN 116 G+ E+ +A+ RH T+KI D D IH+FGFRGEALPSI +VS + S + N Sbjct: 67 GIPPAELRLALTRHATNKIKDLGDIWKIHSFGFRGEALPSIASVSSFKIESAYTKESNNT 126 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 A + I KI P ++ GTI+ V+DLF T+PARL FLKS E ++ R+A Sbjct: 127 EAAFLQIKHGKIEKEGPSSLYKGTIITVQDLFATVPARLKFLKSPVTEQKRAQEIFSRLA 186 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + T T+ S ++ + +R+ + E+ +N + +++ +++I + G Sbjct: 187 LTTN----TTMTLFSGARELLKFPAAHSLHQRLKIIWPEELTSNLIPVDKTTHDIRIHGL 242 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 T PT + +++ +++NGRT+ DK IL I AY + YP VL +EI P +D Sbjct: 243 TSPPTQTQLRSDRVLLYVNGRTLNDKLILRAIFEAYKGRLISKEYPQAVLFIEISPELID 302 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--FHQDNAPKTH 354 VNVHPAK+ +RFR+ I + I ++++AINK S S + I F + + Sbjct: 303 VNVHPAKTEVRFRDEKSIFSAISTALKEAINKTIPSFSLQQTDTDIHPKGFWGEADQEYI 362 Query: 355 LPKYATSLTNT----------------------------------QEKLFLQENR----- 375 P S + Q+ L +E+ Sbjct: 363 FPIKKNSNIHPTQTEVCTTQSTTTDSHGFSLQHMLQNTFVLEPDCQQSLSAKESTYTLAS 422 Query: 376 -----LSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH------QNYIISQT-- 422 S N L + + S D++ E + + H Y+I + Sbjct: 423 SYSSHPSDNSSLLPNLTSNSTDSNKENEISIKYIDKKMCIGPYHYLGQIGDTYLILEDIR 482 Query: 423 ----TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 L+I+DQHA HER++ EK R SQ L+ P + L E + E Sbjct: 483 KKNEQAELIILDQHAVHERILAEKFRNGSLIN--QSQQLVLPIQLKLHYSEQEELQEIAN 540 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L LG G + + IP +L + +LR + ++ IE + Sbjct: 541 SLTSLGFIFSLKGD-ILHVESIPPLLDRSQATIILRKALSRQQEN---------IEKLWI 590 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +MAC +I++G + E L+ + C HGRP + + D++KLF R Sbjct: 591 SMACKAAIKAGLPLPPDEAALLITQWISIEKRENCPHGRPCVLVWTIQDLDKLFKR 646 >gi|15639295|ref|NP_218744.1| DNA mismatch repair protein (mutL) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025537|ref|YP_001933309.1| DNA mismatch repair protein MutL [Treponema pallidum subsp. pallidum SS14] gi|3322578|gb|AAC65291.1| DNA mismatch repair protein (mutL) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018112|gb|ACD70730.1| DNA mismatch repair protein MutL [Treponema pallidum subsp. pallidum SS14] gi|291059702|gb|ADD72437.1| DNA mismatch repair protein MutL [Treponema pallidum subsp. pallidum str. Chicago] Length = 648 Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 151/626 (24%), Positives = 263/626 (42%), Gaps = 47/626 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +LS +IAAGE+IERP+ ++EL+EN+LDA ++++ I GG + +++DNG Sbjct: 36 PIHRLSPDTAKKIAAGEVIERPASVVRELLENALDAGATKIHLEINAGGCALIRVSDNGH 95 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ +++ + + H TSKIS DD + T GFRGEAL SI AVS L L S Sbjct: 96 GMSPQDLLLCAEAHTTSKISSADDLLQLRTLGFRGEALASIAAVSRLHLTS-TRSGPLAW 154 Query: 120 QI-------------AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETN 166 G + + P ++ GT+V V LF PAR FL + ET Sbjct: 155 HYQPKAAGTAAHVPPVPQGTEAGVLEPASLERGTVVRVEQLFENFPARKRFLGRQSAETT 214 Query: 167 LITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE 226 L + +++A+ V F F+ +++ + Q T + + G+ + + +E + Sbjct: 215 LCRSALIDVSLAHHPVEFRFTVDGTHKLTLLSQQTRKDRCLETQMLKGDPALFHTIEGGD 274 Query: 227 KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 S L P R + F+NGR + D ++ + P G +PV L Sbjct: 275 CSFHFHL--VLSEPAICRRERRGIFTFVNGRRIFDYGLVQALVLGSEGYFPNGTFPVACL 332 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----------GISTSSV 336 L ++ ++D N+HPAK + ++ IR+ + +S+ + + ++ Sbjct: 333 FLTVNSERIDFNIHPAKKEVHLQDYAHIRHTLSRSVAHFYRQCTIAHYVRAEPAHAPATQ 392 Query: 337 LSKKMISSFH------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + SS + AP H P+Y + + L + D T+ Sbjct: 393 GNAPTHSSPPCTGVREEPAAPCAHTPRYESLFPLPVQHAHLLPPSPPHISCEHARDCTHP 452 Query: 391 EDNDPVEESEATHYQLG--IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + H G Q+ +I + + L ++DQHAAHER+IF+ ++++ Sbjct: 453 APAAEGDAPVHNHTHTGAFKVLGQVAGTFIAVERNNALYLIDQHAAHERIIFDTLQRNLG 512 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + +I D +L G + + + +P Sbjct: 513 TAQILLIPYHIHPRSDEEARIMHRACT---ELSPAGFRFHEEPDGSWHVTAVPLHWRGSE 569 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 QL DI+ + D + ++LAT AC + + G + ++ L+ + P Sbjct: 570 -EQLAHDILY------SGKNAHDILRHVLATCACRSACKDGTILDDATLHSLVEQAFALP 622 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 S C HGRP +I + ++ K R Sbjct: 623 QSR-CPHGRPIWIVIGRDELFKRIKR 647 >gi|152978663|ref|YP_001344292.1| DNA mismatch repair protein [Actinobacillus succinogenes 130Z] gi|171704301|sp|A6VN10|MUTL_ACTSZ RecName: Full=DNA mismatch repair protein mutL gi|150840386|gb|ABR74357.1| DNA mismatch repair protein MutL [Actinobacillus succinogenes 130Z] Length = 637 Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 167/580 (28%), Positives = 271/580 (46%), Gaps = 66/580 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG + +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIENGGATLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 FG+ EE+ +A+ RH TSKI+ DD I +FGFRGEAL SI +VS LTL SR Sbjct: 61 FGIPKEELSLALARHATSKIATIDDLEAILSFGFRGEALASISSVSRLTLTSRTADQQEA 120 Query: 119 AQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q E+ S+V P + GT VEV +LFF +PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVFVQGREQESTVNPASHPVGTTVEVANLFFNMPARRKFLRTDKTEFGHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A ++FT + + + +R++ + G DF+ A+ ++ K + + L G+ Sbjct: 181 AKSHIAFTLTHNGKIVRQYKSAVEDTQKLKRLAAICGNDFVRQALYIDWKHDNLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 PTF R + Y ++NGR V+DK I IR AYAE + RYP VL L+++P VDV Sbjct: 241 TTPTFARQQNDLSYCYVNGRMVKDKVINHAIRQAYAEHLGSERYPAFVLFLDLNPNDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTS-------------------- 334 NVHP K +RF+ +I +FI Q + A+ + S S Sbjct: 301 NVHPTKHEVRFQQSRLIHDFIFQGVTNALLSAEQFDFSASTESEKNNEIREPQADYQNVT 360 Query: 335 ----------------------------SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQ 366 + +K + H A + P Q Sbjct: 361 PTIRPNRAAAGQNMFELNSPTQTKQTNVPITTKAYPTPAHSGQAGYSTTPSNPPPHFMPQ 420 Query: 367 E----KLFLQENRLSTNDLLPSD---DPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 F +E T + ++ P ++ S + L A A ++ ++ Sbjct: 421 SARSVSPFEREKVTKTEQRIYAELLKTPEVEAPPTSIQSSLLSSSSLLHAVALVNNQALL 480 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 Q ++ + +++ E + N+ Q LL P + L + + A + Sbjct: 481 LQRDTAFYLLPLNKL-QKMRLELLLTLPNT---PQQMLLIPVVFRLSDKQQAQWRQQKIW 536 Query: 480 LHRLGIK-AERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 + G + E + I + +P L +N+ +++ +++ Sbjct: 537 FEQSGFEFIENPVQHRITLNAVPQCLRHQNLQKIVIALLN 576 >gi|188026361|ref|ZP_02961804.2| hypothetical protein PROSTU_03873 [Providencia stuartii ATCC 25827] gi|188020101|gb|EDU58141.1| hypothetical protein PROSTU_03873 [Providencia stuartii ATCC 25827] Length = 653 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 164/638 (25%), Positives = 288/638 (45%), Gaps = 77/638 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG+ +I DNG Sbjct: 3 MAIQILSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGEKLIRIRDNG 62 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL S+P + + Sbjct: 63 SGISKDELVLALARHATSKIATLDDLEAIMSMGFRGEALASISSVSRLTLTSKPAEQSEA 122 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT VEV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 123 WQAYAEGRDMAVTVKPAAHPNGTTVEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + P V+ + + R++ + G F+ A+ ++ + ++ ++G+ Sbjct: 183 SRPDVTINLNHNGKLVKQYRAAKGEAQQERRLANICGTGFMQGALAMSWEHGDLGIKGWV 242 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + ++ Y ++NGR ++D+ I IR AY + + P VL L IDP+QVDV Sbjct: 243 VSP-SSTPVSDIQYCYVNGRMMRDRLINHAIRQAYEGHLDDNQQPAYVLYLTIDPQQVDV 301 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI-------------------------NKKGIS 332 NVHPAK +RF ++ +FI Q ++ A+ S Sbjct: 302 NVHPAKHEVRFHQARLVHDFIYQGVRTALLNAHEPDELPGIEPVTHELTNRSSAGDNYFS 361 Query: 333 TSSVLSKK--------MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 +SS L++ + ++H + + T F +E T Sbjct: 362 SSSTLNENDENETSRTAQQQHDSTGSSRSHSAPSVAATSPTSTNHFSREKSAFTPSNTHY 421 Query: 385 DDPTYSEDNDPVE----------------------------ESEATHYQLGIACAQIHQN 416 D + E ++ G +N Sbjct: 422 DRKAGQLYQALMSVPVAEEDKKPLFPSRQPLDVPAVSSQSVEENTNNFTFGKVLTIYAKN 481 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 + + +++ GL+++ A+ L ++ + + Q LL P + L E A+ + Sbjct: 482 FALIESSLGLILLSLSEANYLLKLAQL--SPDGEALKPQPLLIPLKLSLNSDEIAVFQRN 539 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 E L GI+ + I + L +N+ QL +++ + + + QD + + Sbjct: 540 KEQLTLFGIE-ATISHGKVTIHAVSLPLRTQNLSQLFSGLLN-FLSTKEQASRQDIAQWL 597 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 T++ ++ + +LL ++E+ C Sbjct: 598 AKTVSQE---KTQESWSLAQAVQLLADVERL-----CP 627 >gi|218246760|ref|YP_002372131.1| DNA mismatch repair protein [Cyanothece sp. PCC 8801] gi|226723031|sp|B7JY11|MUTL_CYAP8 RecName: Full=DNA mismatch repair protein mutL gi|218167238|gb|ACK65975.1| DNA mismatch repair protein MutL [Cyanothece sp. PCC 8801] Length = 561 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 157/603 (26%), Positives = 268/603 (44%), Gaps = 65/603 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L +IN IAAGE+I+ + ++EL+EN+LDA ++R+ + Q+ DNG Sbjct: 4 PIQPLPLNVINLIAAGEVIDSIAAVVRELVENALDAGATRLVISLF-PESWRVQVADNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT ++ H TSKI DD I T GFRGEAL S+ V+ L + SR + G Sbjct: 63 GMTLADLRHCALPHSTSKIHQLDDLWKITTLGFRGEALHSLAQVADLEIASRCTSDGVGW 122 Query: 120 Q-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 S + P A+ PGTIV V +LF +P R L + + + I MA+ Sbjct: 123 CLRYQSSGEPLREEPTAIAPGTIVTVGNLFGKMPVRRQGLPAISTQLKAVQSFIENMALC 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERI---SQVIGEDFINNAVELNEKSNEIT--- 232 +P+V++ + ++ T ++ F++ V+ ++S + Sbjct: 183 HPQVTWQVWHNQRLWLNISPGKTPQQILPQLLKGVHYHDLQFVSQGVKSPQESTQKDLDL 242 Query: 233 LQGYTGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 ++ G+P +R + V INGR V+ + I A++ T+P R+PV + L + Sbjct: 243 IEVTLGLPDRCHRHRPDWVKVGINGRIVRSPPVEQAILVAFSRTLPKDRFPVCFIHLTLC 302 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 P Q+D N HPAK I + + + S L ++ + Q A Sbjct: 303 PSQIDWNRHPAKVEIYLHSLDFWQEQV----------------SKLIEQGLRLSPQTLAS 346 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 + L ++EK + + D ++ A A A Sbjct: 347 AAQNQRVGKLLKASEEKASYRVDA-----------------KDHQTDANAVGLMPLKAVA 389 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 Q+ YI+++ + GL +++QH AHER+++E ++ ++ + + +LT Sbjct: 390 QVRNTYIMAEHSTGLWLIEQHIAHERVLYETLQDNWQLIPLETPIILTK----------- 438 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 L E L R+G++ E FG A+R +P +LS + D + +++ S LQ Sbjct: 439 LSDNQVEQLARIGLEIEVFGEQLWAVRTVPKLLSTRE------DCPEALVELSIGGDLQT 492 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 + AC +IR+G M +M LL + + N + C HGRP ++ L+ S + + Sbjct: 493 AQVAV----ACRSAIRNGTPMTLSQMQELLDQWKTTRNPATCPHGRPIYLSLEESSLSRF 548 Query: 592 FGR 594 F R Sbjct: 549 FRR 551 >gi|312880064|ref|ZP_07739864.1| DNA mismatch repair protein MutL [Aminomonas paucivorans DSM 12260] gi|310783355|gb|EFQ23753.1| DNA mismatch repair protein MutL [Aminomonas paucivorans DSM 12260] Length = 587 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 158/605 (26%), Positives = 256/605 (42%), Gaps = 32/605 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+LSE + +IAAGE+IERP KEL+EN+LDA +SR+ + GGK+ + D+G Sbjct: 1 MTIRRLSEDVFQRIAAGEVIERPVSVCKELLENALDAGASRISVTLLQGGKTSLIVEDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+P+A++RH TSKI +D I T GFRGEAL SI VS L + SR + G Sbjct: 61 CGIPFDELPLALERHATSKIFSLEDLDRIGTLGFRGEALASIATVSLLEIRSRATGEDRG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I G + +P+ GT ++V +LFF +PAR FL++ ET + +I+ M + Sbjct: 121 GMIRSEGGSVVLHQPLPCPEGTRIQVEELFFNLPARRKFLRAPGAETRRVGQLIQEMGLI 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P+V T + + + + G + L+ S + + + Sbjct: 181 HPEVRLTLRSEGRVLFDTEPGR---DTERALRDHWGCGAARS---LSVSSGGVEAELWWS 234 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P + +F NGR +QD + + G +VVL + P +DVN Sbjct: 235 GP---KEGRTPLVLFANGRRIQDSSVRGALLAGAGT---CGGDWLVVL--RLPPEDLDVN 286 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQK------AINKKGISTSSVLSKKMISSFHQDNAPK 352 VHPAK+ +RFR P + + + + + K + + LS S Sbjct: 287 VHPAKTEVRFRRPGEVFDLVRRGVAKLVEGGTFGDHWVLPGVPDLSSPPSSGEPYRERTF 346 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 P + + E R L S P + + Q Sbjct: 347 PSSPAPNPPSWDRAFPQRVAEARTFGAPRLGSLFPPLERGEGAPSSRAPSLEPEAVYLGQ 406 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 + Y++ GL ++D HAA ER+++E++R + + S + L Sbjct: 407 AQRGYLLFDGPSGLWVLDPHAAQERILYERLRSSWGRGTVQSLAVPVDLPGSLAP----T 462 Query: 473 IMEHDEDLHRLGIKAERFGPNA---IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 + DL LG + + + IP +L+ + D + + Sbjct: 463 VESCRPDLEGLGFRFQAPSQETPEGWKVTGIPHLLALYPLAP--LDWLRLALAEEGVADP 520 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 ++ + A AC S++ G ++Q E LLR++ C HGRPT L +I Sbjct: 521 ATLVKRM-ADRACKASLKLGERLQEEEARTLLRDLRACETPYACPHGRPTLFTLSWEEIA 579 Query: 590 KLFGR 594 GR Sbjct: 580 SRLGR 584 >gi|172035215|ref|YP_001801716.1| DNA mismatch repair protein [Cyanothece sp. ATCC 51142] gi|226707595|sp|B1X109|MUTL_CYAA5 RecName: Full=DNA mismatch repair protein mutL gi|171696669|gb|ACB49650.1| DNA mismatch repair protein [Cyanothece sp. ATCC 51142] Length = 554 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 157/600 (26%), Positives = 263/600 (43%), Gaps = 66/600 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ LS +I+N IAAGE+I+ + ++EL+EN++DAE++R+ I + DNG Sbjct: 4 PIQLLSPEIVNLIAAGEVIDSLAAVVRELVENAIDAEATRLTISIV-PELWQVTVADNGR 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPP-QNNTG 118 GM+ E + + H TSKI DD I + GFRGEAL SI V LT+ SR G Sbjct: 63 GMSLENLRHCAKAHHTSKICDLDDLWKITSLGFRGEALFSITQVGQLTIKSRDATGYQVG 122 Query: 119 AQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 +I + M GTIV +LF TIP R L + + + I +I M++ Sbjct: 123 WCVDYNQQGEIIKEQTSPMASGTIVTASNLFGTIPVRRQGLPTIKQQLKAIQGMIDNMSL 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVE-LNEKSNEITLQG 235 +P++++ + ++ T P+ + V D + + L+ Sbjct: 183 CHPQITWQVYHNHQSWLTISPGKTPQQILPQLLKSVHFHDLQFLCETIITPSQEQAKLEM 242 Query: 236 YTGIPTFNRGNA-NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G+P + + +NGR V+ + TI + T+P GR+PV L +I P + Sbjct: 243 VLGLPDRTSRGRLDWLKIAVNGRVVRSPRLEQTILAGLSRTLPKGRFPVSFLHFKIPPSE 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 +D N HPAK+ I ++ + + + I+KA+ ++ ++V Sbjct: 303 IDWNRHPAKTEIYLQSLEFWQEKVTEIIEKALKLSPLTITTV------------------ 344 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 Q R+ + Y+ V E A Q++ Sbjct: 345 ----------------GQNQRVKKLLKASENKGVYNVGTSHVNE---LDLIKLRAVGQVN 385 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 + YI+++ + GL +V+QH AHER+++E+++ + + +LT Sbjct: 386 KTYIVAEHSQGLWLVEQHIAHERVLYEQLQDQWQLIPVEQAIILTQLSTK---------- 435 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 E L R+GI E FG N A+R +P +L + D D +I+ S L+ Sbjct: 436 -QVEQLERIGIDIEPFGENTWAVRNVPKLLENRE------DCPDALIELSLGGDLETAQV 488 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + AC +IR+G + +M LL +K N C HGRP ++ L+ S + + F R Sbjct: 489 AV----ACRSAIRNGVLLDLAQMQDLLDSWKKTRNPRTCPHGRPIYLSLEESSLSRFFRR 544 >gi|320535178|ref|ZP_08035306.1| DNA mismatch repair protein [Treponema phagedenis F0421] gi|320147973|gb|EFW39461.1| DNA mismatch repair protein [Treponema phagedenis F0421] Length = 613 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 153/624 (24%), Positives = 275/624 (44%), Gaps = 51/624 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+KLS++ +IAAGEIIERP+ I+EL++N++D+ +++++ I GG F ++ DNG Sbjct: 9 PIKKLSQESAQKIAAGEIIERPASVIRELLDNAIDSGATKIQVEIKNGGIDFIRVVDNGC 68 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E++ + Q H TSKI +D + T GFRGEAL SI AVS L + S + + Sbjct: 69 GMTKEDVELCTQTHATSKIETVEDLLKLSTLGFRGEALSSIDAVSRLEITS-TREGPSAW 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ P + GT V++ +LF PAR FLK E NL + A+ + Sbjct: 128 R-----YQLKKTIPARLAEGTSVQIENLFENFPARKQFLKRASAEANLCRQIFIDKALPH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + FTF+ S + ++ ++ + ++ ++ + G Sbjct: 183 FETEFTFTVDDSLKLRLPACKNLKQ--RYLNALQPKEPEKLFHQIEIAEERFSFAAVLGS 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + +F NGR + + + I P G +P+ +L L++ P +VD N+ Sbjct: 241 PDVVRSDKRNIMIFANGRRITEYGLTQAILYGSEGYFPNGAFPIGILFLQVTPDRVDFNI 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK RF++ I + + ++ +K + + + K SF Q+ + K Sbjct: 301 HPAKKEARFQDYGEIHHAVSSAVANFYRQKTV-ANLLKDTKYDPSFSQELNFTENHTKNQ 359 Query: 360 TSLTNTQEK-----------------LFLQENRLSTNDLLP------------SDDPTYS 390 + +Q E + + D + SD + + Sbjct: 360 INHAWSQSNREYTDRIGGKFGIAARDFTYSEKPMPSFDTVQDYRENYTSGKVSSDFFSRN 419 Query: 391 EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 + Q+ +I + D L ++DQHAAHER++F +++ S Sbjct: 420 ILPENSAAPPQLPQSDFKFLGQVAGTFIAVEKNDALYLIDQHAAHERILFNELK---QSL 476 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 I+ + L+ +I+ + + I + E L + G K G + +P + Sbjct: 477 GISQELLIPYKIVTESDKDDQTIRKAQEALTQAGFKLIDEGDGIWQVTAVP--IRWVGTE 534 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 Q L + +I ++ T +D +++ILAT AC + + G + + +L+ + P Sbjct: 535 QQLTE---DITEAGKTS--EDILDHILATSACRAACKDGAILDPVTARKLVEKTFALPEP 589 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP +I + ++ K R Sbjct: 590 L-CPHGRPLWIVIDREELFKRIKR 612 >gi|261209766|ref|ZP_05924072.1| DNA mismatch repair protein MutL [Vibrio sp. RC341] gi|260841182|gb|EEX67692.1| DNA mismatch repair protein MutL [Vibrio sp. RC341] Length = 653 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 169/653 (25%), Positives = 280/653 (42%), Gaps = 94/653 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIQILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIDKEELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVTQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P + GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPASHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKLVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-------- 349 NVHPAK +RF ++ +FI Q++ A+ + + +++ S + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQSTQVIAPAVNEGAFHSSPVEEVADEVKPI 360 Query: 350 --------------------------------------------APKTHLPKYATSLTNT 365 P PK A++ Sbjct: 361 SVETPVPESVWQAVQSSPDYPRKVVRDNPEGEGDNYQLRERAVANPWVPSPKAASTGKER 420 Query: 366 QEKLFLQENRLSTNDLLPSDDPTYSEDNDPV---------EESEATHYQLGIACAQIHQN 416 + + + L E E++ T +LG A + Sbjct: 421 YGSASVSKKEAAVYQTLMQTPDLPDEVPHAASTNLSVIRKEQAGITIEKLGKAIQVVAGQ 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y++ + G V++ + A + + + + + +Q LL P + L E E H Sbjct: 481 YLLMSSPQGCVLISLYQAQQFKL--RGLLNAQQGALKAQPLLVPLGLKLSELEWQAAQRH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 + +LGI+ + ++I + +P L ++N+ QLL D++ S + L Sbjct: 539 SSAMLQLGIELKTRANHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQALS---HQA 595 Query: 537 LATMACYGSIRSGRKM-----------QSIEMNRLLREMEKN---PNSSQCNH 575 LA + E L+ E+E+ Q H Sbjct: 596 LA-----------DWLTQRIVVEKRDYTLAEAIGLIAELEQLWQGNLPLQDPH 637 >gi|251792374|ref|YP_003007100.1| DNA mismatch repair protein [Aggregatibacter aphrophilus NJ8700] gi|247533767|gb|ACS97013.1| DNA mismatch repair protein MutL [Aggregatibacter aphrophilus NJ8700] Length = 615 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 173/570 (30%), Positives = 284/570 (49%), Gaps = 37/570 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LS ++ NQIAAGE++ERP+ +KEL+ENSLDA + +++ I GG +I DNG Sbjct: 1 MTIRVLSPQLANQIAAGEVVERPASVVKELVENSLDAGADKIQIDIENGGAGLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+D D I + GFRGEAL SI +VS LTL SR + + Sbjct: 61 IGIAKEELALALARHATSKIADLADLEAILSLGFRGEALTSISSVSRLTLTSRTAEQHEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL+SE+ E + I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIQPASHPIGTTVEVANLFFNTPARRKFLRSEKTEFSHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A +SFT + + TN +R++ + +DFI NA++++ K +++ L G+ Sbjct: 181 AKFNISFTLTHNGKVLRQYKSAVTNEQKLKRVAAICSDDFIQNALQIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P FNR + Y ++NGR V+DK I IR AYAE + +YP VL ++++P VDV Sbjct: 241 ALPHFNRPQNDLNYCYVNGRMVRDKIITHAIRQAYAEYLSNDQYPAFVLFIDLNPNDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS--------SFHQDN 349 NVHP K +RF ++ +FI Q I A+ + + S+ +++ I S + Sbjct: 301 NVHPTKHEVRFHQSRLVHDFITQGISHALTSESLDFSATETERKIQEPMGLWEVSSKPNR 360 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 + S +T ++ Q + + + + D + S ++ Sbjct: 361 SAAGPNMFTQPSTYSTGYRVEKQPSEGAYHSSQKHRQNLPHFNRDNITPSVLDAHKYLWM 420 Query: 410 CAQIHQNYIISQTTDG---------LVIVDQHAA---HERLIFEKMRQDFNSTKIT---- 453 + I+ + D L +V HA E+ + K+ Sbjct: 421 DSTAPSRSKITISEDSKPRSTCLHALALVGNHALLLQQEQHFYLLSLSRLQRLKLELNLT 480 Query: 454 ----SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-ERFGPNAIAIREIPAILSKKN 508 SQ LL P I L E + + ++G I ++++ A L ++N Sbjct: 481 LTATSQPLLIPVIFRLSETQWQAWQQQKAWFTQVGFDFLTEDAQRKITLQKVSAYLRRQN 540 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 + QL+ +++E +++ L + + +LA Sbjct: 541 LQQLIIALLNEPVEN-----LSEFLTALLA 565 >gi|289671318|ref|ZP_06492393.1| DNA mismatch repair protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 490 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 167/494 (33%), Positives = 258/494 (52%), Gaps = 38/494 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L E ++NQIAAGE++ERP+ +KEL+EN+LDA ++RV+ + GG +I DNG Sbjct: 1 MAIRQLPEILVNQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGGVRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+T +E+P+AV RH TSKI+ DD + T GFRGEALPSI +VS TL SR G Sbjct: 61 GGITPDELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLTSRRHDAEHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + I G ++ V P A PGT VEVR+LFF +PAR FL++E+ E I + +R +A+A Sbjct: 121 FALEIDGGRLGEVVPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V S + + + + +GEDF A+ ++ + + L G+ Sbjct: 181 RPNVELRVSHNGKPSRRYKPGDLYSDAR--LGETLGEDFARQALRVDHSGSGLRLHGWVA 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++R + +Q Y+++NGR+V+D+ + ++ AY + + GR P VL LE+DP +VDVN Sbjct: 239 QPHYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----------------------------- 329 VHPAK +RFR +I +F+ +++Q A+ Sbjct: 299 VHPAKHEVRFREARLIHDFVYRTLQDALAHTRAGATPNSIGSDGAGYTGATAGGTGNIAS 358 Query: 330 -GISTSSVLSKKMISSFHQDNAPKTHLP--KYATSLTNTQEKLFLQENRLSTNDLLPSDD 386 G+ + S + N + P L+ S Sbjct: 359 GGLPSHGTAPCSSGSGYKYTNWTPSQTPLGLRVDEARAAYSALYAPPPPSSAQQSAGMQS 418 Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 + E+S LG A AQ+H YI+++ +GL++VD HAAHER+ +E+++ Sbjct: 419 MAGTGLPATAEDS--GVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKNA 476 Query: 447 FNSTKITSQTLLTP 460 +S + +Q LL P Sbjct: 477 HDSIGLHAQPLLVP 490 >gi|261345217|ref|ZP_05972861.1| DNA mismatch repair protein MutL [Providencia rustigianii DSM 4541] gi|282566912|gb|EFB72447.1| DNA mismatch repair protein MutL [Providencia rustigianii DSM 4541] Length = 651 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 161/640 (25%), Positives = 287/640 (44%), Gaps = 81/640 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG+ ++ DNG Sbjct: 1 MSIQILSPQLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIERGGEKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +V+ LTL S+P + Sbjct: 61 CGINKDELVLALARHATSKIATLDDLEAIMSMGFRGEALASISSVARLTLTSKPAEQTEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT VEV DLF+ PAR F+++E+ E I +++RR+A+ Sbjct: 121 WQSYAEGRDMQVTVKPAAHPNGTTVEVLDLFYNTPARRKFMRTEKTEFGHIDEIVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + P V+ + + + R+ + G F+ A+ L + +++ ++G+ Sbjct: 181 SRPDVAINLTHNGKLVKQYRAAHDDIQQERRLGAICGTGFMQGALALLWEHSDLAIKGWV 240 Query: 238 GIPTFNRGNA-NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P+ + A + Y ++NGR ++DK I IR AY + + P VL L IDP+QVD Sbjct: 241 VSPSSSHHVASDIQYCYVNGRMMRDKLINHAIRQAYEGHLDENQQPAYVLYLTIDPKQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHPAK +RF ++ +FI Q+++ + + + S + + Sbjct: 301 VNVHPAKHEVRFHQARLVHDFIYQAVRTVLLNTTAVDQLPGIEPISSEIENRASAGENYF 360 Query: 357 KYATSLTNT--------QEKLFLQENRLSTNDLLPSDDPTYSED---------------- 392 S+ + + ++ +E++ S ++ + + S Sbjct: 361 ASPVSVGSVVKNHERHDHQPVYARESQASYSEPKTASSASKSPYVPVENNTNKYSAPDYD 420 Query: 393 -----------------------------------NDPVEESEATHYQLGIACAQIHQNY 417 + A YQ G +N+ Sbjct: 421 RKAGELYQSLMSIPVAPEDKKTLFPERKPLGTHSISSQSVAENADGYQFGKVLTIYAKNF 480 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 + +++ G++++ + A+ L ++ + Q LL P + L E ++ + Sbjct: 481 ALIESSLGIILLSLNEANYLLKLAQL--SPAEESLKPQPLLIPLKLSLKNDEVEVLQRYK 538 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 L GI+A F + I + L +N+ QL D+I + + + I L Sbjct: 539 AQLTLFGIEATIF-HGKVTIHTVSLPLRTQNLSQLFSDLIAFLSTKESVT--NENIAQWL 595 Query: 538 ATMACYGSI---RSGRKMQSIEMNRLLREMEKNPNSSQCN 574 A +I + + +LL ++E+ C Sbjct: 596 A-----KAISQTKIEESWSLAQAVQLLADVERI-----CP 625 >gi|8039787|sp|O83325|MUTL_TREPA RecName: Full=DNA mismatch repair protein mutL Length = 620 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 151/626 (24%), Positives = 263/626 (42%), Gaps = 47/626 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +LS +IAAGE+IERP+ ++EL+EN+LDA ++++ I GG + +++DNG Sbjct: 8 PIHRLSPDTAKKIAAGEVIERPASVVRELLENALDAGATKIHLEINAGGCALIRVSDNGH 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ +++ + + H TSKIS DD + T GFRGEAL SI AVS L L S Sbjct: 68 GMSPQDLLLCAEAHTTSKISSADDLLQLRTLGFRGEALASIAAVSRLHLTS-TRSGPLAW 126 Query: 120 QI-------------AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETN 166 G + + P ++ GT+V V LF PAR FL + ET Sbjct: 127 HYQPKAAGTAAHVPPVPQGTEAGVLEPASLERGTVVRVEQLFENFPARKRFLGRQSAETT 186 Query: 167 LITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE 226 L + +++A+ V F F+ +++ + Q T + + G+ + + +E + Sbjct: 187 LCRSALIDVSLAHHPVEFRFTVDGTHKLTLLSQQTRKDRCLETQMLKGDPALFHTIEGGD 246 Query: 227 KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 S L P R + F+NGR + D ++ + P G +PV L Sbjct: 247 CSFHFHL--VLSEPAICRRERRGIFTFVNGRRIFDYGLVQALVLGSEGYFPNGTFPVACL 304 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----------GISTSSV 336 L ++ ++D N+HPAK + ++ IR+ + +S+ + + ++ Sbjct: 305 FLTVNSERIDFNIHPAKKEVHLQDYAHIRHTLSRSVAHFYRQCTIAHYVRAEPAHAPATQ 364 Query: 337 LSKKMISSFH------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + SS + AP H P+Y + + L + D T+ Sbjct: 365 GNAPTHSSPPCTGVREEPAAPCAHTPRYESLFPLPVQHAHLLPPSPPHISCEHARDCTHP 424 Query: 391 EDNDPVEESEATHYQLG--IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + H G Q+ +I + + L ++DQHAAHER+IF+ ++++ Sbjct: 425 APAAEGDAPVHNHTHTGAFKVLGQVAGTFIAVERNNALYLIDQHAAHERIIFDTLQRNLG 484 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + +I D +L G + + + +P Sbjct: 485 TAQILLIPYHIHPRSDEEARIMHRACT---ELSPAGFRFHEEPDGSWHVTAVPLHWRGSE 541 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 QL DI+ + D + ++LAT AC + + G + ++ L+ + P Sbjct: 542 -EQLAHDILY------SGKNAHDILRHVLATCACRSACKDGTILDDATLHSLVEQAFALP 594 Query: 569 NSSQCNHGRPTFIKLKLSDIEKLFGR 594 S C HGRP +I + ++ K R Sbjct: 595 QSR-CPHGRPIWIVIGRDELFKRIKR 619 >gi|121729708|ref|ZP_01682150.1| DNA mismatch repair protein MutL [Vibrio cholerae V52] gi|121628559|gb|EAX61041.1| DNA mismatch repair protein MutL [Vibrio cholerae V52] Length = 653 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 174/653 (26%), Positives = 285/653 (43%), Gaps = 94/653 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ + ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------- 346 NVHPAK +RF ++ +FI Q++ A+ + + +++ H Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQGAQVMAPTINEGAFHLPHCAEEVNPPVVP 360 Query: 347 -----------QDNAPKTHLPKYATSLTNTQEKLFLQ----------------------- 372 Q P+ A + E Q Sbjct: 361 MIDTTQQERVWQAVQNTPDYPRKAPRDNDRDESDNPQVRERAVSNPWVASPKTASTGKER 420 Query: 373 --------------ENRLSTNDLLPSDDPTYSEDNDPVE--ESEATHYQLGIACAQIHQN 416 + + T DL + T S +E ++ +LG A + Sbjct: 421 YGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIEAVKANIAIEKLGKAIQVVAGQ 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y++ + G V++ + A + + + + + +Q LL P + L E E + H Sbjct: 481 YLLMSSPQGCVLISLYQAQQLKL--RGLLNAQHGALKAQPLLVPLALKLNESEWQVAQRH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L +LGI+ + ++I + +P L ++N+ QLL D++ S + L Sbjct: 539 SSALLQLGIELKSRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQALS---HQA 595 Query: 537 LATMACYGSIRSGRKM-----------QSIEMNRLLREMEKN---PNSSQCNH 575 LA + E L+ E+E+ Q H Sbjct: 596 LA-----------DWLTQRIVVEKRDYTLAEAIGLIAELEQLWQGNLPLQDPH 637 >gi|90408487|ref|ZP_01216646.1| DNA mismatch repair protein [Psychromonas sp. CNPT3] gi|90310419|gb|EAS38545.1| DNA mismatch repair protein [Psychromonas sp. CNPT3] Length = 600 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 153/548 (27%), Positives = 270/548 (49%), Gaps = 14/548 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L+ ++ NQIAAGE++ERP+ +KEL+ENSLDA +SR+E I GG ++ DNG Sbjct: 1 MPIQILAPRLANQIAAGEVVERPASVVKELLENSLDAGASRIEIDIEKGGAKCIRVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKIS DD I + GFRGEAL S+ +VS LT S+P Sbjct: 61 QGVAKDELTLALSRHATSKISHLDDLEAIMSLGFRGEALASVSSVSRLTFTSKPQDQEQA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + ++P A GT VEV DLFF PAR FLK+E+ E I ++IRR+A+ Sbjct: 121 WQAIAEGRDMQVHIKPCAHPQGTTVEVLDLFFNTPARRRFLKTEKTEFQHIDELIRRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +Y +SFT + ST +R++ + + F+ +A+ + + G+ Sbjct: 181 SYFDISFTLKHNGKIIRQYRPASTPTQQLKRLASICSDSFVKSALHFESADQGLKISGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 R + Y +INGR ++D+ + I+ AYA +P G +P V+ ++ QVDV Sbjct: 241 SDRLSPRTLGDVQYCYINGRIIRDRLVNHAIKQAYARILPAGFFPGFVIYIDCPAEQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP+K +RF + +FI+ ++ +N + ++ + + S+ +P T+ Sbjct: 301 NVHPSKHEVRFHQARWVHDFIVSTLSVTLNDPEMLMATSQKGETVPSYIP--SPVTNASS 358 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 + T T + + + D + S +L + A + + Y Sbjct: 359 NESIPTPTYTPKHHYQAPIDEAQVNAYCDFIRPHVVPESQISTLPKSRLTLPLAIVSEYY 418 Query: 418 IISQ-------TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 ++ Q ++ L ++ A + L ++ + + + ++ +Q LL P + L Sbjct: 419 LLLQASVNKTGSSSPLYLLSLPKADQLLQQTRLFEAWKNGEVIAQPLLLPVRLSLDSQLP 478 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 +L + L RLG ++ + + ++PA+L + + ++L ++ + T + Sbjct: 479 SLNAAGEILLQRLGFSVKQ-KMQKLIVSKVPALLRQGPVAKILPVLLTYLKSFEEALT-E 536 Query: 531 DRIENILA 538 + + A Sbjct: 537 SEVNDFCA 544 >gi|212709951|ref|ZP_03318079.1| hypothetical protein PROVALCAL_01002 [Providencia alcalifaciens DSM 30120] gi|212687360|gb|EEB46888.1| hypothetical protein PROVALCAL_01002 [Providencia alcalifaciens DSM 30120] Length = 647 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 167/636 (26%), Positives = 288/636 (45%), Gaps = 77/636 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG+ +I DNG Sbjct: 1 MAIQILSPQLANQIAAGEVVERPASVVKELVENSLDSGATRIDIEIERGGEKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL S+P + + Sbjct: 61 CGINKDELVLALARHATSKIATLDDLEAIMSMGFRGEALASISSVSRLTLTSKPAEQSEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT VEV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQSYAEGRDMQVTVKPAAHPNGTTVEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + P V+ S + R+ + G F+ A+ L+ + +++ ++G+ Sbjct: 181 SRPDVAMNLSHNGKLVKQYRAAQDANQQERRLGAICGTGFMQGALALSWEHSDLGIKGWV 240 Query: 238 GIPTFNRG-NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P+ + + Y ++NGR ++DK I IR AY + + P VL L IDP+QVD Sbjct: 241 VAPSTSPSGINDIQYCYVNGRMMRDKLINHAIRQAYEGHLEDNQQPAYVLYLTIDPKQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQ----KAINKKGISTSSVLSKKMISSFHQDNAPK 352 VNVHPAK +RF ++ +FI Q+++ A+ + + ++ ++ + + Sbjct: 301 VNVHPAKHEVRFHQARLVHDFIYQAVRTVLLNALTESELPGVESVTVEVENRASAGDNYF 360 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTND-------------------------------- 380 T + + QE+++S D Sbjct: 361 ASPVATTTQKPQQSQHIHTQESQVSYGDKNSGAMIGKNRSFSSGNIGTYNPAPSYERNTG 420 Query: 381 -------------------LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 S A YQ G +N+ + + Sbjct: 421 ELYQRLMSIPVEPEDKKPLFPERKPLNVSPVEHQFVAKSADDYQFGKVLTIYAKNFALIE 480 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 ++ G++++ + A+ L ++ + + Q LL P + L E ++ + E L Sbjct: 481 SSLGIILLSLNEANYLLKLAQLMP--ENGGLKPQPLLIPLKLSLKSDEIEVLQRYKEQLT 538 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 GI A F + I + L +N+ QL D+I + + + I LA+ Sbjct: 539 LFGIDASIF-HGKVTIHTVSLPLRTQNLSQLFSDLIVFLSTKESIP--NESIAQWLAS-- 593 Query: 542 CYGSI---RSGRKMQSIEMNRLLREMEKNPNSSQCN 574 +I ++ + +LL ++E+ C Sbjct: 594 ---AISQAKTEESWSLAQAVQLLADVERI-----CP 621 >gi|218440096|ref|YP_002378425.1| DNA mismatch repair protein [Cyanothece sp. PCC 7424] gi|218172824|gb|ACK71557.1| DNA mismatch repair protein MutL [Cyanothece sp. PCC 7424] Length = 566 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 165/609 (27%), Positives = 285/609 (46%), Gaps = 68/609 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L +IN IAAGE+I+ ++EL+EN+LDAE++R+ I + Q+ DNG Sbjct: 1 MNIQSLPPNVINLIAAGEVIDSLGAVVRELVENALDAEATRIVISIYPD-LWWIQVADNG 59 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ-NNT 117 GM+ E++ H TSKI D I + GFRGEAL SI V++L + SR ++T Sbjct: 60 KGMSLEDLKRCSLAHSTSKIRSVNDLWKITSLGFRGEALHSIAQVANLEVASRLKGGDDT 119 Query: 118 GAQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G + S + + P A+ PGTIV V +LF +P R L S + I +I +A Sbjct: 120 GWRIRYHSSGEAELIEPTAIAPGTIVTVSNLFRNLPVRRKGLPSTTQQLKAIQTLIYDIA 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNF-QSTNGNFPERISQVIGEDFINNAVELNEK-------- 227 + +P V++ + +K++ ++ P+ +++V D + Sbjct: 180 LCHPHVTWCLEQNDRSWFKISPGKTALQILPQLLNRVHQNDLQLLTQSFDTPSLPDNLSS 239 Query: 228 -SNEITLQGYTGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVV 285 N+ TL+ G+P +R + V +NGR V+ + +I +A+A T+ R+PV Sbjct: 240 IENQSTLELVIGLPDRCHRRRTDWVKVGVNGRVVRSPQLEQSILSAFARTLQRDRFPVCF 299 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF 345 + ++ P Q+D N HPAK+ I + + + I++A+ S++ SF Sbjct: 300 VHIKTCPSQIDWNRHPAKTEIYLHSLSFWQEKTAAGIEQALRINTDSSA---------SF 350 Query: 346 HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 H K S NT E+ ++ + N L Sbjct: 351 HHGRVVKLLKVSEEKSTYNTDEQPPIKTAKSRDNLGLLE--------------------- 389 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 A AQ+ + YI+++ +GL +++QH AHER+++E+++ + + + +L Sbjct: 390 -LRAVAQVRKTYIVAEHPNGLWLIEQHIAHERVLYEQLQDHWKIVTLETPIIL------- 441 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 L E L RL ++ E FG A+R P +L+K++ D + +I+ S Sbjct: 442 ----NQLTPTQVEQLQRLEVEIEPFGEQLWAVRTAPELLAKRS------DCGEALIELSW 491 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 LQ +AT AC +IR+G + +M R++ + + N C HGRP ++ L+ Sbjct: 492 GGDLQTAQ---VAT-ACRSAIRNGTPLNLEQMQRIIDQWKNTRNPRTCPHGRPIYLSLEE 547 Query: 586 SDIEKLFGR 594 + + + F R Sbjct: 548 TSLARFFRR 556 >gi|153217195|ref|ZP_01950959.1| DNA mismatch repair protein MutL [Vibrio cholerae 1587] gi|124113778|gb|EAY32598.1| DNA mismatch repair protein MutL [Vibrio cholerae 1587] Length = 653 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 171/653 (26%), Positives = 282/653 (43%), Gaps = 94/653 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------- 346 NVHPAK +RF ++ +FI Q++ A+ + + +++ H Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQSAQVMAPTINEGAFHLPHCAEEVNPPVAP 360 Query: 347 -----------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 Q P+ A + E Q + ++L + T S + Sbjct: 361 MIETTQQERVWQAVQNTPDYPRKAPRDNDRDESDNQQVRERAVSNLWVASPKTASTGKER 420 Query: 396 ---------------------------------------VEESEATHYQLGIACAQIHQN 416 ++ +LG A + Sbjct: 421 YGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIEAVKANTDIEKLGKAIQVVAGQ 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y++ + G V++ + A + + + + + +Q LL P + L E E + H Sbjct: 481 YLLMSSPQGCVLISLYQAQQLKL--RGLLNAQHGALKAQPLLVPLALKLNESEWQVAQRH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L +LGI+ + ++I + +P L ++N+ QLL D++ S + L Sbjct: 539 SSALLQLGIELKTRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQALS---HQA 595 Query: 537 LATMACYGSIRSGRKM-----------QSIEMNRLLREMEKN---PNSSQCNH 575 LA + E L+ E+E+ Q H Sbjct: 596 LA-----------DWLTQRIVVEKRDYTLAEAIGLIAELEQLWQGNLPLQDPH 637 >gi|258623497|ref|ZP_05718499.1| DNA mismatch repair protein mutL [Vibrio mimicus VM573] gi|258584209|gb|EEW08956.1| DNA mismatch repair protein mutL [Vibrio mimicus VM573] Length = 653 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 169/656 (25%), Positives = 285/656 (43%), Gaps = 100/656 (15%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGVDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVTQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + ST +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKMVRQYRAASTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--ISTSSVLSKKMISSFHQD------- 348 NVHPAK +RF ++ +FI Q++ A+ + I+ S + + +D Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQSAQVIAPSINDGAFHLPNVEEDAEASVAE 360 Query: 349 ------------NAPKTHLPKYATSLTNTQEKL--------------------------- 369 P Y +E+ Sbjct: 361 PATTEASVQKRVWQAAQDTPAYPRKAPRDEEESESEHYQLRERAVTNPWVTSPKTAGSNK 420 Query: 370 -------FLQENRLSTNDLLPSDDPTYSEDND--------PVEESEATHYQLGIACAQIH 414 ++ ++ L+ + D + N ++E +LG A + Sbjct: 421 EKYGSVSVSKKEAVAYQTLMQTPDLPDEDPNSSPVSTSSLQTTKTEIVIEKLGKAIQVVE 480 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Y++ ++ G V++ H A + + + + +Q LL P + L E E + Sbjct: 481 GEYLLMSSSQGCVLISLHQAQVVKL--RGLLNAQHGALKAQPLLVPLSLKLSESEWQVAQ 538 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI----------PQLLRDIIDE--IID 522 H + L +LGI+ + ++I + +P L ++N+ + + + + D Sbjct: 539 THLDSLLQLGIELKTRANHSIMVMAVPQPLRQQNLQQLLPDLLSYAAVAAEPLSHQVLAD 598 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN---PNSSQCNH 575 T + ++ + LA E L+ E+E+ H Sbjct: 599 WLTQQIVVEKRDYTLA-----------------EAIGLIAELEQLWQGRLPLHDPH 637 >gi|119946846|ref|YP_944526.1| DNA mismatch repair protein MutL [Psychromonas ingrahamii 37] gi|171769133|sp|A1SZL2|MUTL_PSYIN RecName: Full=DNA mismatch repair protein mutL gi|119865450|gb|ABM04927.1| DNA mismatch repair protein MutL [Psychromonas ingrahamii 37] Length = 628 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 155/563 (27%), Positives = 272/563 (48%), Gaps = 34/563 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L+ ++ NQIAAGE++ERP+ +KELIENSLDA ++++E I GG ++ DNG Sbjct: 1 MPIQILAARLANQIAAGEVVERPASVVKELIENSLDAGATKIEIDIEKGGAKCIRVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A+ RH TSKIS DD I + GFRGEAL S+ +VS LT S+P Sbjct: 61 AGVCQEQLTLALSRHATSKISHLDDLEAIVSLGFRGEALASVSSVSRLTFTSKPADQEQA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A GT VEV DLFF PAR FLK+E+ E I ++IRR+A+ Sbjct: 121 WQAIAEGRDMQVTIQPAAHPQGTTVEVLDLFFNTPARRRFLKTEKTEFQHIDELIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + +++F ++ T +R++ + E F+++A+ N + + G+ Sbjct: 181 SRFEITFVLKHNHKIVHQYRATQTQSQQEKRLASICSESFVSSALYFQNSDNALKISGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 R + + Y +INGR ++DK I I+ YA ++P G++P V+ +E DP QVDV Sbjct: 241 SDKLSARSSNDVQYCYINGRVIRDKLINHAIKQVYAYSLPQGKFPAYVIYIECDPDQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------- 344 NVHP+K +RF + +FI+ ++ +N+ +S S S+ S Sbjct: 301 NVHPSKHEVRFHQARWVHDFIVSTLTVTLNESPLSASEPQSQPKPSEHAYLPANRGEEKT 360 Query: 345 ----------------FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS-DDP 387 Q AP + K T+ Q K+ + ++ L S D+ Sbjct: 361 DSQYEPKEKNKSAGRVNEQTAAPSSGYAKRETNPQLDQAKMAAYCDFVAEAHLPFSADEQ 420 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 S +D + +++ + +++ + ++ + Sbjct: 421 QSSTLSDLTFATVVCLIDRQYLLIKLNAKQQLLNIDSPFLVLSLENVDLMIKQMELFAAW 480 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + ++ +Q LL P ++L + +E RLG + G + + I ++PA+L + Sbjct: 481 SDGEVIAQPLLLPVRVELDALLLKTSEDFNELFMRLGFVFKIQG-SKLIISKVPALLRQA 539 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQ 530 + +++ +++ + + Q Sbjct: 540 PVAKIIPELLTFLSQTDNNMDAQ 562 >gi|150020662|ref|YP_001306016.1| DNA mismatch repair protein MutL [Thermosipho melanesiensis BI429] gi|226723043|sp|A6LL30|MUTL_THEM4 RecName: Full=DNA mismatch repair protein mutL gi|149793183|gb|ABR30631.1| DNA mismatch repair protein MutL [Thermosipho melanesiensis BI429] Length = 551 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 163/595 (27%), Positives = 293/595 (49%), Gaps = 49/595 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+KL + ++++IAAGE + P +KEL+EN+LDA ++++E I GGKS+ ++ DNG Sbjct: 3 KIKKLDKNVVSRIAAGEAVAGPFSVVKELVENALDASATKIEIEILNGGKSYIKVKDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ +++ ++++ H TSKI D D N+++FGFRGEAL SI VS L + S + + Sbjct: 63 GMSRDDLLLSIEEHTTSKIEDFEDIYNLYSFGFRGEALSSISKVSKLVITSNDGKESNRL 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ K P GTIVEV DLFF +PAR FLKS+ VE + + + + + Sbjct: 123 EVIGGKIKDIKEYPT-SEKGTIVEVYDLFFNVPARRKFLKSDNVEKRYVVEYVEKFLLGN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V + ++ + + GN +R + E V + + ++G Sbjct: 182 PDVEIVLKSDG----EVVYNAVKGNLEDRFRLIFPE------VREFTEVSGKYVKGIISS 231 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P++ R N F+ R V DK + T Y E + ++P VL +E+ PR VDVNV Sbjct: 232 PSYYRNNRTGQIFFVQKRFVIDKMLYYIFETGYGEALL--KHPYGVLFIEVPPRFVDVNV 289 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K ++F NP +I + I +++++ I K + + KK ++ +++ + PK Sbjct: 290 HPQKLEVKFSNPNVIYSDITRTVREGIKKF--VSKKIFVKKEQNTVNENKLNYAYGPKSK 347 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 TN + + + E ++ + + Y++ Sbjct: 348 PFQTNIE--------------------------KNMLFNVEKKQLEVKRDIVVLKKRYVL 381 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ DG+ I+D HAAHER++++ + + + K+ L+ P I + + + ED Sbjct: 382 FESNDGIYIMDFHAAHERILYDNIIKQLDE-KVERLDLMIPIEIKIGKSFLQIAEGRKED 440 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 R G + I + IP+ + ++ ++L +I+DE +++I+A Sbjct: 441 FKRFGFNI-KIDKEKIIVLSIPSFIKPSDVVEVLMEILDEYRILGEN---PKSMKHIIAD 496 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC ++++G + E +L+ E+ K + C HGRP F+K+ +++ F R Sbjct: 497 KACKKAVKTGYDILESEAKQLVEEVLK-RGLTTCPHGRPLFLKITYKELDSFFER 550 >gi|297582273|ref|ZP_06944187.1| DNA mismatch repair protein MutL [Vibrio cholerae RC385] gi|297533492|gb|EFH72339.1| DNA mismatch repair protein MutL [Vibrio cholerae RC385] Length = 653 Score = 389 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 174/653 (26%), Positives = 284/653 (43%), Gaps = 94/653 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------- 346 NVHPAK +RF ++ +FI Q++ A+ + + +++ H Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQSAQVMAPTINEGAFHLPHCAEEVNPPVVP 360 Query: 347 -----------QDNAPKTHLPKYATSLTNTQEKLFLQ----------------------- 372 Q P+ A + E Q Sbjct: 361 MIETTQQERVWQAVQNTPDYPRKAPRDNDRDESDNQQVRERAVSNPWVASPKTASTGKER 420 Query: 373 --------------ENRLSTNDLLPSDDPTYSEDNDPVE--ESEATHYQLGIACAQIHQN 416 + + T DL + T S +E ++ +LG A + Sbjct: 421 YGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIEAVKANTAIEKLGKAIQVVAGQ 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y++ + G V++ + A + + + + + +Q LL P + L E E + H Sbjct: 481 YLLMSSPQGCVLISLYQAQQLKL--RGLLNAQHGALKAQPLLVPLALKLNESEWQVAQRH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L +LGI+ + ++I + +P L ++N+ QLL D++ S + L Sbjct: 539 SSALLQLGIELKSRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQALS---HQA 595 Query: 537 LATMACYGSIRSGRKM-----------QSIEMNRLLREMEKN---PNSSQCNH 575 LA + E L+ E+E+ Q H Sbjct: 596 LA-----------DWLTQRIVVEKRDYTLAEAIGLIAELEQLWQGNLPLQDPH 637 >gi|153827310|ref|ZP_01979977.1| DNA mismatch repair protein MutL [Vibrio cholerae MZO-2] gi|149738776|gb|EDM53118.1| DNA mismatch repair protein MutL [Vibrio cholerae MZO-2] Length = 653 Score = 389 bits (998), Expect = e-105, Method: Composition-based stats. Identities = 174/653 (26%), Positives = 284/653 (43%), Gaps = 94/653 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------- 346 NVHPAK +RF ++ +FI Q++ A+ + + +++ H Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQSAQVMAPTINEGAFHLPHCAEEVNPPVVP 360 Query: 347 -----------QDNAPKTHLPKYATSLTNTQEKLFLQ----------------------- 372 Q P+ A + E Q Sbjct: 361 MIETTQQERVWQAVQNTPDYPRKAPRDNDRDESDNQQVRERAVSNPWVASPKTASTGKER 420 Query: 373 --------------ENRLSTNDLLPSDDPTYSEDNDPVE--ESEATHYQLGIACAQIHQN 416 + + T DL + T S +E ++ +LG A + Sbjct: 421 YGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIEAVKANTAIEKLGKAIQVVAGQ 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y++ + G V++ + A + + + + + +Q LL P + L E E + H Sbjct: 481 YLLMSSPQGCVLISLYQAQQLKL--RGLLNAQHGALKAQPLLVPLALKLNESEWQVAQRH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L +LGI+ + ++I + +P L ++N+ QLL D++ S + L Sbjct: 539 SSALLQLGIELKTRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQALS---HQA 595 Query: 537 LATMACYGSIRSGRKM-----------QSIEMNRLLREMEKN---PNSSQCNH 575 LA + E L+ E+E+ Q H Sbjct: 596 LA-----------DWLTQRIVVEKRDYTLAEAIGLIAELEQLWQGNLPLQDPH 637 >gi|15640372|ref|NP_229999.1| DNA mismatch repair protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|147675065|ref|YP_001218614.1| DNA mismatch repair protein [Vibrio cholerae O395] gi|153823684|ref|ZP_01976351.1| DNA mismatch repair protein MutL [Vibrio cholerae B33] gi|227080557|ref|YP_002809108.1| DNA mismatch repair protein MutL [Vibrio cholerae M66-2] gi|229506859|ref|ZP_04396367.1| DNA mismatch repair protein MutL [Vibrio cholerae BX 330286] gi|229508663|ref|ZP_04398157.1| DNA mismatch repair protein MutL [Vibrio cholerae B33] gi|229516045|ref|ZP_04405496.1| DNA mismatch repair protein MutL [Vibrio cholerae RC9] gi|229606373|ref|YP_002877021.1| DNA mismatch repair protein [Vibrio cholerae MJ-1236] gi|254851656|ref|ZP_05241006.1| DNA mismatch repair protein mutL [Vibrio cholerae MO10] gi|255747145|ref|ZP_05421088.1| DNA mismatch repair protein MutL [Vibrio cholera CIRS 101] gi|262147191|ref|ZP_06027996.1| DNA mismatch repair protein MutL [Vibrio cholerae INDRE 91/1] gi|262166929|ref|ZP_06034649.1| DNA mismatch repair protein MutL [Vibrio cholerae RC27] gi|298501245|ref|ZP_07011043.1| DNA mismatch repair protein mutL [Vibrio cholerae MAK 757] gi|20043258|sp|Q9KV13|MUTL_VIBCH RecName: Full=DNA mismatch repair protein mutL gi|172047712|sp|A5F3L5|MUTL_VIBC3 RecName: Full=DNA mismatch repair protein mutL gi|254766184|sp|C3LR77|MUTL_VIBCM RecName: Full=DNA mismatch repair protein mutL gi|9654761|gb|AAF93518.1| DNA mismatch repair protein MutL [Vibrio cholerae O1 biovar El Tor str. N16961] gi|126518801|gb|EAZ76024.1| DNA mismatch repair protein MutL [Vibrio cholerae B33] gi|146316948|gb|ABQ21487.1| DNA mismatch repair protein MutL [Vibrio cholerae O395] gi|227008445|gb|ACP04657.1| DNA mismatch repair protein MutL [Vibrio cholerae M66-2] gi|227012201|gb|ACP08411.1| DNA mismatch repair protein MutL [Vibrio cholerae O395] gi|229346948|gb|EEO11915.1| DNA mismatch repair protein MutL [Vibrio cholerae RC9] gi|229354298|gb|EEO19227.1| DNA mismatch repair protein MutL [Vibrio cholerae B33] gi|229355964|gb|EEO20883.1| DNA mismatch repair protein MutL [Vibrio cholerae BX 330286] gi|229369028|gb|ACQ59451.1| DNA mismatch repair protein MutL [Vibrio cholerae MJ-1236] gi|254847361|gb|EET25775.1| DNA mismatch repair protein mutL [Vibrio cholerae MO10] gi|255735194|gb|EET90596.1| DNA mismatch repair protein MutL [Vibrio cholera CIRS 101] gi|262024634|gb|EEY43315.1| DNA mismatch repair protein MutL [Vibrio cholerae RC27] gi|262031372|gb|EEY49981.1| DNA mismatch repair protein MutL [Vibrio cholerae INDRE 91/1] gi|297539999|gb|EFH76062.1| DNA mismatch repair protein mutL [Vibrio cholerae MAK 757] Length = 653 Score = 389 bits (998), Expect = e-105, Method: Composition-based stats. Identities = 173/653 (26%), Positives = 285/653 (43%), Gaps = 94/653 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ + GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ + ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------- 346 NVHPAK +RF ++ +FI Q++ A+ + + +++ H Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQGAQVMAPTINEGAFHLPHCAEEVNPPVVP 360 Query: 347 -----------QDNAPKTHLPKYATSLTNTQEKLFLQ----------------------- 372 Q P+ A + E Q Sbjct: 361 MIDTTQQERVWQAVQNTPDYPRKAPRDNDRDESDNPQVRERAVSNPWVASPKTASTGKER 420 Query: 373 --------------ENRLSTNDLLPSDDPTYSEDNDPVE--ESEATHYQLGIACAQIHQN 416 + + T DL + T S +E ++ +LG A + Sbjct: 421 YGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIEAVKANIAIEKLGKAIQVVAGQ 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y++ + G V++ + A + + + + + +Q LL P + L E E + H Sbjct: 481 YLLMSSPQGCVLISLYQAQQLKL--RGLLNAQHGALKAQPLLVPLALKLNESEWQVAQRH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L +LGI+ + ++I + +P L ++N+ QLL D++ S + L Sbjct: 539 SSALLQLGIELKSRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQALS---HQA 595 Query: 537 LATMACYGSIRSGRKM-----------QSIEMNRLLREMEKN---PNSSQCNH 575 LA + E L+ E+E+ Q H Sbjct: 596 LA-----------DWLTQRIVVEKRDYTLAEAIGLIAELEQLWQGNLPLQDPH 637 >gi|153830889|ref|ZP_01983556.1| DNA mismatch repair protein MutL [Vibrio cholerae 623-39] gi|148873623|gb|EDL71758.1| DNA mismatch repair protein MutL [Vibrio cholerae 623-39] Length = 653 Score = 389 bits (998), Expect = e-105, Method: Composition-based stats. Identities = 174/653 (26%), Positives = 284/653 (43%), Gaps = 94/653 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------- 346 NVHPAK +RF ++ +FI Q++ A+ + + +++ H Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQSAQVMAPTINEGAFHLPHCTEEVNPPVVP 360 Query: 347 -----------QDNAPKTHLPKYATSLTNTQEKLFLQ----------------------- 372 Q P+ A + E Q Sbjct: 361 MIETTQQERVWQAVQNTPDYPRKAPRDNDRDESDSQQVRERAVSNPWVASPKTASTGKER 420 Query: 373 --------------ENRLSTNDLLPSDDPTYSEDNDPVE--ESEATHYQLGIACAQIHQN 416 + + T DL + T S +E ++ +LG A + Sbjct: 421 YGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIEAVKANIAIEKLGKAIQVVAGQ 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y++ + G V++ + A + + + + + +Q LL P + L E E + H Sbjct: 481 YLLMSSPQGCVLISLYQAQQLKL--RGLLNAQYGALKAQPLLVPLALKLNESEWQVAQRH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L +LGI+ + ++I + +P L ++N+ QLL D++ S + L Sbjct: 539 SSALLQLGIELKSRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQALS---HQA 595 Query: 537 LATMACYGSIRSGRKM-----------QSIEMNRLLREMEKN---PNSSQCNH 575 LA + E L+ E+E+ Q H Sbjct: 596 LA-----------DWLTQRIVVEKRDYTLAEAIGLIAELEQLWQGNLPLQDPH 637 >gi|229526909|ref|ZP_04416312.1| DNA mismatch repair protein MutL [Vibrio cholerae bv. albensis VL426] gi|229336078|gb|EEO01097.1| DNA mismatch repair protein MutL [Vibrio cholerae bv. albensis VL426] Length = 653 Score = 388 bits (997), Expect = e-105, Method: Composition-based stats. Identities = 175/653 (26%), Positives = 288/653 (44%), Gaps = 94/653 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----------------K 340 NVHPAK +RF ++ +FI Q++ A+ + + +++ Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQSAQVMAPTINEGAFHLPHSAEEVNPPVVP 360 Query: 341 MISSFHQDNAPK-----THLPKYATSLTNTQEKLFLQ----------------------- 372 MI + Q+ + P+ A + E Q Sbjct: 361 MIETTQQERVWQAVQNMPDYPRKAPRDNDRDESDNQQVRERAVSNPWVASPKTASTGKER 420 Query: 373 --------------ENRLSTNDLLPSDDPTYSEDNDPVE--ESEATHYQLGIACAQIHQN 416 + + T DL + T S +E ++ +LG A + Sbjct: 421 YGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIEAVKANTAIEKLGKAIQVVAGQ 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y++ + G V++ + A + + + + + +Q LL P + L E E + H Sbjct: 481 YLLMSSPQGCVLISLYQAQQLKL--RGLLNAQHGALKAQPLLVPLALKLNESEWQVAQRH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L +LGI+ + ++I + +P L ++N+ QLL D++ S + L Sbjct: 539 SSALLQLGIELKTRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQALS---HQA 595 Query: 537 LATMACYGSIRSGRKM-----------QSIEMNRLLREMEKN---PNSSQCNH 575 LA + E L+ E+E+ Q H Sbjct: 596 LA-----------DWLTQRIVVEKRDYTLAEAIGLIAELEQLWQGNLPLQDPH 637 >gi|77163867|ref|YP_342392.1| DNA mismatch repair protein [Nitrosococcus oceani ATCC 19707] gi|76882181|gb|ABA56862.1| DNA mismatch repair protein MutL [Nitrosococcus oceani ATCC 19707] Length = 583 Score = 388 bits (997), Expect = e-105, Method: Composition-based stats. Identities = 163/603 (27%), Positives = 283/603 (46%), Gaps = 42/603 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L + NQIAAGE++ERP+ +KEL+EN+LDA + R+E GG ++ D+G Sbjct: 8 RIQILPPALANQIAAGEVVERPASVLKELVENALDAGAQRIEIETEAGGIGLIRVRDDGC 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+A+ H TSK+ ++ NI T GFRGEAL SI AVS L+L SR N G Sbjct: 68 GIHHNDLPLALSSHATSKVRHGEELLNITTLGFRGEALASIDAVSRLSLSSRMADNEHGW 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + + V+P+A GT VEVRDLF+ PAR FL+ E+ E + + ++A+++ Sbjct: 128 CIR----ENTPVQPIAHPLGTTVEVRDLFYNTPARRRFLRGEKTEFIRLRTIQTQLALSH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++SF S + + + +RI+++ G +F +++ + + L G+ G Sbjct: 184 FEISFRISYNRRPFLTLPACTCPPEQLKRITELCGRNFAEHSMYFKREIEGLCLWGWLGH 243 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F R + Y ++N R V+DK + R AY + GR+P +L LE+ QVDVN Sbjct: 244 PEFARSQTDLQYCYVNHRMVRDKLLSHAARQAYGNRLSQGRHPAYLLYLELPTHQVDVNA 303 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +RFR + FI++++ + + + + + ++ Sbjct: 304 HPAKHEVRFRESRQVHGFIVRTLAEILEQT----------------EPEGEHRLASGEFR 347 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + K + L + + N + + G A + Y++ Sbjct: 348 SHPHEVLGKEQAGDTYLVAEVPGSYGPRKHGKHNPLSKGRNDAPSRFGQVQAFVLGRYLL 407 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ + GL++VD A L ++R + + I Q LL P + + H ++ Sbjct: 408 TENSQGLMLVDLPIARAHLAQARLRTAYAAGHIIRQPLLLPLTFQVSLQQAEWTERHVQE 467 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL-A 538 L +LG+ R GP + +REIPA + + ++ LL ++ ++ + + ++ A Sbjct: 468 LRKLGLGLHRLGPQTVVLREIPAAIRELDLEGLLLALLAQLTRQQHIMPAEIPLGELIVA 527 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKN---------PNSSQCNHGRPTFIKLKLSDIE 589 A Y + + R EMN L+E+E P +L +I Sbjct: 528 LTAQYPASTTSRP-SLQEMNAFLQELENLYQIETGLKAPLPW---------RELPEHEIA 577 Query: 590 KLF 592 + F Sbjct: 578 QWF 580 >gi|229512377|ref|ZP_04401852.1| DNA mismatch repair protein MutL [Vibrio cholerae TMA 21] gi|229350592|gb|EEO15537.1| DNA mismatch repair protein MutL [Vibrio cholerae TMA 21] Length = 653 Score = 388 bits (997), Expect = e-105, Method: Composition-based stats. Identities = 170/653 (26%), Positives = 281/653 (43%), Gaps = 94/653 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------- 346 NVHPAK +RF ++ +FI Q++ A+ + + +++ H Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQGAQVMAPTINEGAFHLPHCAEEVNPPVVP 360 Query: 347 -----------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 Q P+ A + E Q + ++ + T S + Sbjct: 361 MIETTQQERVWQAVQNTPDYPRKAPRDNDRDESDNQQVRERAVSNPWVASPKTASTGKER 420 Query: 396 ---------------------------------------VEESEATHYQLGIACAQIHQN 416 ++ +LG A + Sbjct: 421 YGSASVSKKEAAVYQTLMQTPDLSDEELSTASTIVSSIEAVKANIAIEKLGKAIQVVAGQ 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y++ + G V++ + A + + + + + +Q LL P + L E E + H Sbjct: 481 YLLMSSPQGCVLISLYQAQQLKL--RGLLNAQHGALKAQPLLVPLALKLNESEWQVAQRH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L +LGI+ + ++I + +P L ++N+ QLL D++ S + L Sbjct: 539 SSALLQLGIELKSRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQALS---HQA 595 Query: 537 LATMACYGSIRSGRKM-----------QSIEMNRLLREMEKN---PNSSQCNH 575 LA + E L+ E+E+ Q H Sbjct: 596 LA-----------DWLTQRIVVEKRDYTLAEAIGLIAELEQLWQGNLPLQDPH 637 >gi|297565947|ref|YP_003684919.1| DNA mismatch repair protein MutL [Meiothermus silvanus DSM 9946] gi|296850396|gb|ADH63411.1| DNA mismatch repair protein MutL [Meiothermus silvanus DSM 9946] Length = 540 Score = 388 bits (997), Expect = e-105, Method: Composition-based stats. Identities = 159/593 (26%), Positives = 262/593 (44%), Gaps = 67/593 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL +++ +IAAGE++ + ++EL+EN+LDA +SR++ + GG S ++DNG G Sbjct: 2 IRKLPPELVREIAAGEVVTGIADVVRELLENALDAGASRIQVELEEGGLSRIVVSDNGLG 61 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + +E+P+AV+ H +SK+ D + I T GFRGE L +I L + SRPP GA + Sbjct: 62 IPKDELPLAVEAHASSKLF-DLARITTLGFRGEGLYAIRQAGRLRITSRPPGQLGGATLE 120 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 G+ I+ GT VEV LF +PAR L+S E + ++ R + +P++ Sbjct: 121 ALGDSITLSEH-PAPAGTRVEVVRLFEHLPARRQSLESPAQEARKVAHLLSRYLLHHPRL 179 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 + G+F + V G N + L L G P Sbjct: 180 WLKLVVDGEEQLT----HAGGSFSDAARLVWGSVTANRLLSLEFAQAPYRLSGLLSRPEL 235 Query: 243 NRGNANQFYVFINGRTV-QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 +R ++ ++ INGR V + + T+ AY E +P+G+YPV VL LE+ P V VN P Sbjct: 236 SRPRRDRLFLAINGRPVEWPENLAKTLLEAYRELLPVGQYPVGVLNLELPPESVLVNTAP 295 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 KS R P + +F+ +++Q ++ ++ + P+ P Sbjct: 296 DKSRPRLLQPEPVLDFLARAVQGLLSAHPLARTL---------------PEPSPPFGPAP 340 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 + KL + Y++++ Sbjct: 341 TSGAFPKL--------------------------------------RYLGVFRELYLLAE 362 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 D L +VDQHAAHER+I+E++ + + L PE++ L E E +L Sbjct: 363 ADDQLYVVDQHAAHERVIYEELVRRYREEPH--VELAHPELLTLSVDEEMNYAERSGELE 420 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 G+ E FG +R IPA L+ P L+ ++ + + +LA +A Sbjct: 421 AAGLVLEPFGSGRYRVRTIPAFLAAH--PNLVGEVAKGAL---RGPGFVEAWRTVLARLA 475 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C +I++G + + LL + C HGRPT + L ++ + FGR Sbjct: 476 CLPAIKAGHPLSQVSAQALLDRLAACELPWVCPHGRPTALVLSELELARRFGR 528 >gi|254292137|ref|ZP_04962909.1| DNA mismatch repair protein MutL [Vibrio cholerae AM-19226] gi|150421936|gb|EDN13911.1| DNA mismatch repair protein MutL [Vibrio cholerae AM-19226] Length = 653 Score = 388 bits (997), Expect = e-105, Method: Composition-based stats. Identities = 170/653 (26%), Positives = 281/653 (43%), Gaps = 94/653 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------- 346 NVHPAK +RF ++ +FI Q++ A+ + + +++ H Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQSAQVMAPTINEGAFHLPHCAEEVNPPVVP 360 Query: 347 -----------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 Q P+ A + E Q + ++ + T S + Sbjct: 361 MIETTQQERVWQAVQNTPDYPRKAPRDNDRDESDNQQVRERAVSNHWVASPKTASSGKER 420 Query: 396 ---------------------------------------VEESEATHYQLGIACAQIHQN 416 ++ +LG A + Sbjct: 421 YGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTVVSSIEAVKANTAIEKLGKAIQVVAGQ 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y++ + G V++ + A + + + + + +Q LL P + L E E + H Sbjct: 481 YLLMSSPQGCVLISLYQAQQLKL--RGLLNAQHGALKAQPLLVPLALKLNESEWQVAQRH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L +LGI+ + ++I + +P L ++N+ QLL D++ S + L Sbjct: 539 SSALLQLGIELKSRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQALS---HQA 595 Query: 537 LATMACYGSIRSGRKM-----------QSIEMNRLLREMEKN---PNSSQCNH 575 LA + E L+ E+E+ Q H Sbjct: 596 LA-----------DWLTQRIVVEKRDYTLAEAIGLIAELEQLWQGNLPLQDPH 637 >gi|262172557|ref|ZP_06040235.1| DNA mismatch repair protein MutL [Vibrio mimicus MB-451] gi|261893633|gb|EEY39619.1| DNA mismatch repair protein MutL [Vibrio mimicus MB-451] Length = 653 Score = 388 bits (996), Expect = e-105, Method: Composition-based stats. Identities = 167/656 (25%), Positives = 284/656 (43%), Gaps = 100/656 (15%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGVDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVTQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + ST +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKMVRQYRAASTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD--------- 348 NVHPAK +RF ++ +FI Q++ A+ + + ++ + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQSAQVIAPSINDGAFHLPNVEEDAEASVAE 360 Query: 349 ------------NAPKTHLPKYATSLTNTQEKL--------------------------- 369 P Y +E+ Sbjct: 361 PATTEASVQKRVWQAAQDTPAYPRKAPRDEEESESEHYQLRERAVTNPWVTSPRMAGLNK 420 Query: 370 -------FLQENRLSTNDLLPSDDPTYSEDND--------PVEESEATHYQLGIACAQIH 414 ++ ++ L+ + D + + N ++E +LG A + Sbjct: 421 EKYGLVSVSKKEAVAYQTLMQTPDLSDEDPNSSPVSTSSLQTTKTEIVIEKLGKAIQVVE 480 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Y++ ++ G V++ H A + + + + +Q LL P + L E E + Sbjct: 481 GEYLLMSSSQGCVLISLHQAQLVKL--RGLLNAQHGALKAQPLLVPLSLKLSESEWQVAQ 538 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI----------PQLLRDIIDE--IID 522 H E L +LGI+ + ++I + +P L ++N+ + + + + D Sbjct: 539 THLESLLQLGIELKTRANHSIMVMAVPQPLRQQNLQQLLPDLLSYAAVAAEPLSHQVLAD 598 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN---PNSSQCNH 575 T + ++ + LA E L+ E+E+ H Sbjct: 599 WLTQRIVVEKRDYTLA-----------------EAIGLIAELEQLWQGHLPLHDPH 637 >gi|17230547|ref|NP_487095.1| DNA mismatch repair protein [Nostoc sp. PCC 7120] gi|20455095|sp|Q8YSM9|MUTL_ANASP RecName: Full=DNA mismatch repair protein mutL gi|17132149|dbj|BAB74754.1| DNA mismatch repair protein [Nostoc sp. PCC 7120] Length = 563 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 150/610 (24%), Positives = 269/610 (44%), Gaps = 77/610 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L ++++ I AGE+I+ + ++EL+ENSLDA ++R+ + + ++ DNG Sbjct: 4 TIQALPQEVVYLITAGEVIDSFAAVVRELVENSLDAGANRIVVYLW-PQQWRVRVADNGC 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +++ A H TSKI D IH+ GFRGEAL S+ ++ + ++SR P+N Sbjct: 63 GMNLDDLQQAASAHSTSKIRSSADLWKIHSLGFRGEALHSLTTLADVEIISRAPENVGWR 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + K V A+ PGT+V V +LF + AR L + + + I+++A+ + Sbjct: 123 VVYGDSGKAVHVEATAIAPGTVVTVSNLFASCAARRQGLPTTAQQMKAVQATIQQIALCH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNF-PERISQVIGEDFINNAVELNEKSNEITLQG--- 235 P+ ++ + ++ +T G P+ + Q+ D +E+ N Sbjct: 183 PQTTWQVWQNDRIWFTISPAATAGQLIPQFLPQLRPSDLQEIKLEIPNPENPQLSTNNKP 242 Query: 236 -------YTGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLL 287 G+P +R + V INGR ++ + TI A+ T+P RYP+ + Sbjct: 243 NASALALVVGLPDRCHRHRPDWVRVAINGRMIKLPELEQTILAAFHRTLPRDRYPLCFVH 302 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF-- 345 L I P Q++ N +PAK+ I + + + + Q+I +A+ + + +S Sbjct: 303 LLISPDQINWNRNPAKTEIYLHDLSYWQEQVTQAINQALRISAANIPESVQTTRVSQLLK 362 Query: 346 -HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 ++ P+ A NTQ Sbjct: 363 AAEEKGNYNFNPRNANPADNTQN------------------------------------- 385 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 A AQ+ YI+++ G+ +V+QH AHER+++E++ ++ + +L Sbjct: 386 -YLKAVAQVSNTYIVAEHPGGMWLVEQHIAHERVLYEQLCDNWRLIPVEPPIIL------ 438 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L L R+G+ + FG A+R +PA+L ++ D + I++ S Sbjct: 439 -----YQLSPAQVAQLQRIGLDIDIFGEQLWAVRNLPAMLQQRE------DCAEAILELS 487 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 LQ + AC +IR+G M EM +LL + ++ N C HGRP ++ L Sbjct: 488 WGGDLQTAQVAV----ACRSAIRNGTPMSLPEMQKLLDDWQRTRNPRTCPHGRPIYLSLD 543 Query: 585 LSDIEKLFGR 594 S + + F R Sbjct: 544 ESSLSRFFRR 553 >gi|121591551|ref|ZP_01678811.1| DNA mismatch repair protein MutL [Vibrio cholerae 2740-80] gi|121546591|gb|EAX56786.1| DNA mismatch repair protein MutL [Vibrio cholerae 2740-80] Length = 622 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 157/565 (27%), Positives = 259/565 (45%), Gaps = 66/565 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ + GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ + ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------- 346 NVHPAK +RF ++ +FI Q++ A+ + + +++ H Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQGAQVMAPTINEGAFHLPHCAEEVNPPVVP 360 Query: 347 -----------QDNAPKTHLPKYATSLTNTQEKLFLQ----------------------- 372 Q P+ A + E Q Sbjct: 361 MIDTTQQERVWQAVQNTPDYPRKAPRDNDRDESDNPQVRERAVSNPWVASPKTASTGKER 420 Query: 373 --------------ENRLSTNDLLPSDDPTYSEDNDPVE--ESEATHYQLGIACAQIHQN 416 + + T DL + T S +E ++ +LG A + Sbjct: 421 YGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIEAVKANIAIEKLGKAIQVVAGQ 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y++ + G V++ + A + + + + + +Q LL P + L E E + H Sbjct: 481 YLLMSSPQGCVLISLYQAQQLKL--RGLLNAQHGALKAQPLLVPLALKLNESEWQVAQRH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIP 501 L +LGI+ + ++I + +P Sbjct: 539 SSALLQLGIELKSRTNHSIMVMAVP 563 >gi|229526991|ref|ZP_04416387.1| DNA mismatch repair protein MutL [Vibrio cholerae 12129(1)] gi|229335514|gb|EEO00995.1| DNA mismatch repair protein MutL [Vibrio cholerae 12129(1)] Length = 653 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 174/653 (26%), Positives = 285/653 (43%), Gaps = 94/653 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------- 346 NVHPAK +RF ++ +FI Q++ A+ + + +++ H Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQGAQVMAPTINEGAFHLPHCAEEVNPPVVP 360 Query: 347 -----------QDNAPKTHLPKYATSLTNTQEKLFLQ----------------------- 372 Q P+ A + E Q Sbjct: 361 MIETTQQERVWQAVQNTPDYPRKAPRDNDRDESDNQQVRERAVSNPWVASPKTASTGKER 420 Query: 373 --------------ENRLSTNDLLPSDDPTYSEDNDPVE--ESEATHYQLGIACAQIHQN 416 + + T DL + T S +E ++ +LG A + Sbjct: 421 YGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIEAVKANIAIEKLGKAIQVVAGQ 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y++ + G V++ + A + + + + + +Q LL P + L E E + H Sbjct: 481 YLLMSSPQGCVLISLYQAQQLKL--RGLLNAQHGALKAQPLLVPLALKLNESEWQVAQRH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L +LGI+ + +++ + +P L ++N+ QLL D++ SS + L Sbjct: 539 SSALLQLGIELKTRTNHSMMVMAVPQPLRQQNLQQLLPDLLSYAASSSESQALS---HQA 595 Query: 537 LATMACYGSIRSGRKM-----------QSIEMNRLLREMEKN---PNSSQCNH 575 LA + E L+ E+E+ Q H Sbjct: 596 LA-----------DWLTQRIVVEKRDYTLAEAIGLIAELEQLWQGNLPLQDPH 637 >gi|119483288|ref|ZP_01618702.1| DNA mismatch repair protein [Lyngbya sp. PCC 8106] gi|119458055|gb|EAW39177.1| DNA mismatch repair protein [Lyngbya sp. PCC 8106] Length = 563 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 159/603 (26%), Positives = 267/603 (44%), Gaps = 63/603 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E II IAAGE+I+ ++EL+ENSLDA ++R+ ++ + Q+ DNG Sbjct: 4 QIQPLPEDIIYLIAAGEVIDSLEAVVRELVENSLDAGATRISISVS-PEQWLIQVADNGV 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + A H TSKI+ D S I + GFRGEAL S+ ++ L ++SRP Sbjct: 63 GMDLANLKQAATAHSTSKITSIADLSQITSLGFRGEALHSLAQLAQLEILSRPQGEIGWR 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + VA+ PGT+V V DLF R L S + I ++ +A+ + Sbjct: 123 VVYNRQGEPLEPEAVAIAPGTVVTVSDLFDNWQGRRQALPSATQQLRSIYRIVSHIALCH 182 Query: 180 PKVSFTFSTIKSNRYKMNF-QSTNGNFPERISQVIGEDFINNAVELNEKSNEI------T 232 P V++ ++R +++ + P+ + V D VELN + +I + Sbjct: 183 PHVNWQVRQGSTSRLQISPGGAAASILPQILRGVRIGDLQRLQVELNPPTADIASPRPSS 242 Query: 233 LQGYTGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 L+G G+P +R + + +NGR V+ + +I A++ T+P R+PV + L I+ Sbjct: 243 LEGVLGLPDRCHRHRPDWVKIALNGRVVRTSELEQSILAAFSRTVPRDRFPVCFIHLRIN 302 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 P ++D N HPAK + + + I I + + + + L + Sbjct: 303 PAEIDWNRHPAKEEVYLHHLNYWQEQIQACIDQTLRLNPATAEAKLQR------------ 350 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 Q ++S + D +E A A Sbjct: 351 ------------------VDQLLKVSEKQGHYHTTRSIQAKKDQTS-TEQLSLIELQAIA 391 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 Q+H YI+++ GL +V+QH AHER+++E++ + + + LL Sbjct: 392 QVHNTYIVAEHPHGLWLVEQHIAHERVLYEQLCEAWKQVSVEPPILLQHLSPS------- 444 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 E L LG++ + FG A+R +P +L+++ D D +I+ S LQ Sbjct: 445 ----QLEQLQGLGLQVDPFGEGLWAVRTVPEMLAQRE------DCHDALIELSLGKDLQ- 493 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 AC +IR+G + EM LL + + N C HGRP F++L S + + Sbjct: 494 ---AAQVATACRSAIRNGTPLSLTEMQTLLEQWVRTRNPRTCPHGRPIFLRLDESSLSRF 550 Query: 592 FGR 594 F R Sbjct: 551 FRR 553 >gi|75907079|ref|YP_321375.1| DNA mismatch repair protein [Anabaena variabilis ATCC 29413] gi|123772753|sp|Q3MEV6|MUTL_ANAVT RecName: Full=DNA mismatch repair protein mutL gi|75700804|gb|ABA20480.1| DNA mismatch repair protein MutL [Anabaena variabilis ATCC 29413] Length = 563 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 151/610 (24%), Positives = 272/610 (44%), Gaps = 77/610 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L ++++ I AGE+I+ + ++EL+ENSLDA ++R+ + + ++ DNG Sbjct: 4 TIQALPQEVVYLITAGEVIDSFAAVVRELVENSLDAGANRIVVYLW-PQQWRVRVADNGC 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +++ A H TSKI D IH+ GFRGEAL S+ ++ + ++SR P+N Sbjct: 63 GMNLDDLQQAASAHSTSKIRSSADLWKIHSLGFRGEALHSLTTLADVEIISRAPENVGWR 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + + V A+ PGT+V V +LF + AR L + + + I+++A+ + Sbjct: 123 VVYGDNGEATQVEATAIAPGTVVTVSNLFASCAARRQGLPTTAQQMKAVQATIQQIALCH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNF-PERISQVIGEDFINNAVELNEKSNEI------- 231 P+ ++ + ++ +T G P+ + Q+ D +E+ N Sbjct: 183 PQTTWQVWQNDRIWFTISPAATAGQLIPQFLPQLRPGDLQEIKLEIPNPENPQLSTNNKA 242 Query: 232 ---TLQGYTGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLL 287 TL G+P +R + V INGR ++ + TI A+ T+P RYP+ L Sbjct: 243 NATTLSLVVGLPDRCHRHRPDWVRVAINGRMIKSPELEQTILAAFHRTLPRDRYPLCFLH 302 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF-- 345 L I P Q++ N +PAK+ I + + + + Q+I + + + + +S Sbjct: 303 LLISPDQINWNRNPAKTEIYLHDLSYWQEQVTQAINQTLRISAANIKESVQTTRVSQLLK 362 Query: 346 -HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 ++ P+ A NTQ Sbjct: 363 AAEEKGNYNFNPQNANPADNTQ-------------------------------------- 384 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 A AQ+ YI+++ + G+ +V+QH AHER+++E++ ++ + +L Sbjct: 385 HYLKAVAQVSNTYIVAEHSGGMWLVEQHIAHERVLYEQLCDNWRLIPVEPPIIL------ 438 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L L R+G+ + FG A+R +PA+L ++ D + I++ S Sbjct: 439 -----YQLSPAQVAQLQRIGLDIDIFGEQLWAVRNLPAMLQQRE------DCAEAILELS 487 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 LQ + AC +IR+G M EM +LL + ++ N C HGRP ++ L Sbjct: 488 WGGDLQTAQVAV----ACRSAIRNGTPMSLPEMQKLLDDWQRTRNPRTCPHGRPIYLSLD 543 Query: 585 LSDIEKLFGR 594 S + + F R Sbjct: 544 ESSLSRFFRR 553 >gi|153803482|ref|ZP_01958068.1| DNA mismatch repair protein MutL [Vibrio cholerae MZO-3] gi|124120983|gb|EAY39726.1| DNA mismatch repair protein MutL [Vibrio cholerae MZO-3] Length = 653 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 174/653 (26%), Positives = 284/653 (43%), Gaps = 94/653 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 LGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------- 346 NVHPAK +RF ++ +FI Q++ A+ + + +++ H Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQSAQVMAPTINEGAFHLPHCAEEVNPPVVP 360 Query: 347 -----------QDNAPKTHLPKYATSLTNTQEKLFLQ----------------------- 372 Q P+ A + E Q Sbjct: 361 MIETTQQERVWQAVQNTPDYPRKAPRDNDRDESDNQQVRERAVSNPWVASPKTASTGKER 420 Query: 373 --------------ENRLSTNDLLPSDDPTYSEDNDPVE--ESEATHYQLGIACAQIHQN 416 + + T DL + T S +E ++ +LG A + Sbjct: 421 YGSASISKKEAAVYQTLMQTPDLSDEEPSTASTVVSSIEAVKANTAIEKLGKAIQVVAGQ 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y++ + G V++ + A + + + + + +Q LL P + L E E + H Sbjct: 481 YLLMSSPQGCVLISLYQAQQLKL--RGLLNAQHGALKAQPLLVPLALKLNESEWQVAQRH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L +LGI+ + ++I + +P L ++N+ QLL D++ S + L Sbjct: 539 SSALLQLGIELKSRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQALS---HQA 595 Query: 537 LATMACYGSIRSGRKM-----------QSIEMNRLLREMEKN---PNSSQCNH 575 LA + E L+ E+E+ Q H Sbjct: 596 LA-----------DWLTQRIVVEKRDYTLAEAIGLIAELEQLWQGNLPLQDPH 637 >gi|160947535|ref|ZP_02094702.1| hypothetical protein PEPMIC_01469 [Parvimonas micra ATCC 33270] gi|158446669|gb|EDP23664.1| hypothetical protein PEPMIC_01469 [Parvimonas micra ATCC 33270] Length = 616 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 169/626 (26%), Positives = 303/626 (48%), Gaps = 47/626 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LSE I +IAAGE+IE P IKEL+ENS+D+ ++ ++ I GK I+DNG Sbjct: 1 MSIKLLSEDTIQKIAAGEVIENPYSVIKELVENSIDSGATFIKVEIKNAGKKEIMISDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++I +A +H TSK++ +D +I ++GFRGEAL SI A+S + + +R + G Sbjct: 61 CGIEEDDIELAFTKHATSKLNNFEDIYSILSYGFRGEALASISAISKVDINTRTKNSEFG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + KI + MN GT + +RDLF+ +P R FLKS+ E ++IT ++ A+A Sbjct: 121 IHCYLENNKIIRKNKIGMNLGTTIYIRDLFYNVPIRKKFLKSDAYENSIITTLMYSFALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 K+SF + ++ S + I + +DF N + +N + ++ + GY Sbjct: 181 NQKISFKYIKDSKVVFE---TSEKNTLKDDIKYIFKDDFYKNLISVNIEDSDYKIYGYIS 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F +G+ ++F+NGR + D+ I + I + A IP G++P V+ +E++P +D+N Sbjct: 238 NNHFYKGSRASQFLFVNGRYIFDEKIRNIIEKSIATLIPKGKFPAFVMFIEVNPSLIDIN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--FHQDNAPKTHLP 356 VHP K I+F + N + +I + K S + ++ ++++ Sbjct: 298 VHPNKRKIKFIFEDKLLNSLNNNITDIVLKNTTSDFISVKEEQKEKILYNEEKINNEQSS 357 Query: 357 KYATSLTNTQEKLFLQEN---RLSTNDLLPSDDPTYSEDND-------PVEESEATHYQL 406 + T + + +N + S +DL + N+ VE+ + + + Sbjct: 358 EEDIIETIIYDDDYNTQNIVNKFSYDDLFKVNKDDIKTINEEDNIENYIVEDEKVENTPV 417 Query: 407 GIAC------------------AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 +I YI+ D +I+D A RL++E + ++N Sbjct: 418 LEQIKLDDNTETSKNILDYEIIGKIFSKYILLSDKDEFIIIDILNAKYRLLYENLLDNYN 477 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN 508 + I+ Q LL P I++L E + ++ + L+ LGI+A+ F N+IAIR +P +L+ Sbjct: 478 NCTISKQILLFPIILELNEYKLSVFNTIKDKLNNLGIEADIFDENSIAIRTMPNLLNDNL 537 Query: 509 IPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK-- 566 + +R+++DE++ + E+ L M C R + E+ LL ++ K Sbjct: 538 DKEDIREMLDELL-----FKDNRVFEDSLYKMVCKK--RINIGLTDFEVEELLSQLSKIN 590 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLF 592 + + K+ D +KLF Sbjct: 591 LDINFYD---KKILRKISKEDFDKLF 613 >gi|260913834|ref|ZP_05920308.1| DNA mismatch repair protein MutL [Pasteurella dagmatis ATCC 43325] gi|260631921|gb|EEX50098.1| DNA mismatch repair protein MutL [Pasteurella dagmatis ATCC 43325] Length = 640 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 167/582 (28%), Positives = 265/582 (45%), Gaps = 59/582 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIRVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIEQGGSGLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ +A+ RH TSKIS DD I + GFRGEAL SI +VS LTL SR N Sbjct: 61 VGIPKTELSLALARHATSKISCLDDLDCILSLGFRGEALASISSVSRLTLTSRTTDQNEA 120 Query: 119 AQIAISGEKISSVR-PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMDTTIVPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A + F + + +RIS + GEDF+ NA+++ + +++ L G+ Sbjct: 181 AKSHIQFILTHNGKTIRHYKSAVNDTQKLKRISAICGEDFVQNALQIEWRHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P F+R + Y +INGR V+DK I IR AY+E + +YP VL L+++P VDV Sbjct: 241 ALPHFSRTQNDLNYCYINGRMVRDKVINHAIRQAYSEHLHNDQYPAFVLFLDLNPNDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINK-------KGISTSSVLSKKMISSFHQDNA 350 NVHP K +RF +I +FI Q I A+ S ++ SS + A Sbjct: 301 NVHPTKHEVRFHQQRLIHDFICQGISNALASEQANLTFHDTIQEPAPSWQVASSIKPNRA 360 Query: 351 PKTHLPKYATSLTNTQEKLFLQ--ENRLSTNDLLPSDDPTYSEDNDPVE----------- 397 +S + + + + ENR PT E E Sbjct: 361 AAGQNVFATSSNHSYKNNISSKFTENRPHFAQQWQHLQPTKQELQAYDELLNTEKTEKPV 420 Query: 398 -----------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE---------- 436 E E ++ ++ + ++ +Q+A Sbjct: 421 YTHATSLYAKTEEEKSNLISTNQTTVVNISVSNVTAQTSPILFNQNAFLRTLALVENRAL 480 Query: 437 --------------RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 +L ++ + Q LL P I L + E A + + + Sbjct: 481 LLQQQQHFYLLPVQKLQHLNIKLTLQEPPVLQQPLLIPVIFRLNDKEFAHWQQQQDFFTQ 540 Query: 483 LGIKA-ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 +G + E + + ++P+ L ++N+ Q + ++ + Sbjct: 541 VGFEFVENPQQKRLTLNKVPSCLRQQNLQQCVLSLLATPSEE 582 >gi|113461226|ref|YP_719295.1| DNA mismatch repair protein [Haemophilus somnus 129PT] gi|122945347|sp|Q0I463|MUTL_HAES1 RecName: Full=DNA mismatch repair protein mutL gi|112823269|gb|ABI25358.1| DNA mismatch repair protein MutL [Haemophilus somnus 129PT] Length = 615 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 162/555 (29%), Positives = 264/555 (47%), Gaps = 33/555 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KELIENSLDA ++ ++ I GG + +I DNG Sbjct: 1 MTIKILPPQLANQIAAGEVVERPASVVKELIENSLDAGATHIQIEIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Q N Sbjct: 61 IGIAKDELHLALARHATSKIASLDDLEMILSLGFRGEALASISSVSRLTLTSRTAQQNEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETSITPASHPIGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A P+V+FT + ++ TN +RI+ + G DF+ NA+ ++ K N++ L G+ Sbjct: 181 AKPQVAFTLTHNNKLIHRYKSAVTNEQKIKRIATICGNDFMQNALHIDWKHNDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F R + Y +INGR V+DK I IR AY+E + +YP VL ++++P +VDV Sbjct: 241 IQPQFARHQNDLNYCYINGRMVRDKVITHAIRQAYSEYLNNEQYPAFVLFIDLNPNEVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RF +I +FI Q + A+ + + + + + Sbjct: 301 NVHPTKHEVRFHQARLIHDFIYQGMTNALTSEQTNIPIQSEQSNPTKVAEPQGIWNLTTH 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND---------------PVEESEAT 402 + + +F Q+ + + ++ E + Sbjct: 361 NKGNRATAGKNIFAQQPKDYDKKSSQFKPHFTANYSEVTPKKAVQKAYAELLVTHEEKTI 420 Query: 403 HYQLGIACAQIHQNYIISQTT--DGLVIVDQHAAHERLIFEKM------------RQDFN 448 + YI Q L +++ A + + R Sbjct: 421 ASSTLPHQFTHNATYISEQKNVLHALALIENKALLLQQNQQYFLLSIQALQHFNIRLQLQ 480 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-ERFGPNAIAIREIPAILSKK 507 + I QTLL P ++ L + + + + G E + I + +P L + Sbjct: 481 QSNIAQQTLLIPILLRLNKQQYQSWQQQALFFQQSGFDFTENSAQHRITLNRLPICLRTQ 540 Query: 508 NIPQLLRDIIDEIID 522 NI +++ ++D+ + Sbjct: 541 NIQKIILHLLDQPHE 555 >gi|262401563|ref|ZP_06078130.1| DNA mismatch repair protein MutL [Vibrio sp. RC586] gi|262352278|gb|EEZ01407.1| DNA mismatch repair protein MutL [Vibrio sp. RC586] Length = 653 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 171/653 (26%), Positives = 281/653 (43%), Gaps = 94/653 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIQILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI DD I + GFRGEAL SI +VS L L SR Sbjct: 61 SGIDKEELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLMLTSRTVTQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNSFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-------- 349 NVHPAK +RF ++ +FI Q++ A+ + + +++ S + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQSEQVIAPAVNEGAFHSSQAEEVADTVEPI 360 Query: 350 --------------------------------------------APKTHLPKYATSLTNT 365 P PK A S Sbjct: 361 AIETSVPDRVWQAVQSSPDYPRKVARDNPEGESENYQLRERAAANPWVASPKPAGSNKEK 420 Query: 366 QEKLFLQENRLSTNDLLPSDDPTYSEDNDPV---------EESEATHYQLGIACAQIHQN 416 + + + + L E E++ T +LG A + Sbjct: 421 FGSVSVSKKEVEVYQTLMQTPDLPDEVPHAASTNLSVIRKEQAGITIEKLGKAIQVVAGQ 480 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y++ + G V++ + A + + + + + +Q LL P + L E E ++ H Sbjct: 481 YLLMSSPQGCVLISLYQAQQFKL--RGLLNAQHGALKAQPLLVPLALKLSELEWQVVQRH 538 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L +LGI+ + ++I + +P L ++N+ QLL D++ S + L Sbjct: 539 SSALLQLGIELKTRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQALS---HQA 595 Query: 537 LATMACYGSIRSGRKM-----------QSIEMNRLLREMEKN---PNSSQCNH 575 LA + E L+ E+E+ Q H Sbjct: 596 LA-----------DWLTQRIVVEKRDYTLAEAIGLIAELEQLWQGNLPLQDPH 637 >gi|298491462|ref|YP_003721639.1| DNA mismatch repair protein MutL ['Nostoc azollae' 0708] gi|298233380|gb|ADI64516.1| DNA mismatch repair protein MutL ['Nostoc azollae' 0708] Length = 565 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 156/610 (25%), Positives = 272/610 (44%), Gaps = 76/610 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L +++ I AGE+I+ + ++EL+ENSLDA ++R+ I + ++ DNG+ Sbjct: 5 TIKALPTEVVYLITAGEVIDSLASVVRELVENSLDAGATRIVVYI-NPQQWGVRVADNGW 63 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +++ A H TSKI D NI + GFRGEAL S+ ++ L ++SRP G Sbjct: 64 GMNFDDLQQAATAHSTSKIHSPADLWNITSLGFRGEALHSLTTLADLEILSRPVGGTEGW 123 Query: 120 QIAI-SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q G K+ + + A+ PGT+V V +LF R L + + + +V++++A+ Sbjct: 124 QFVYGDGGKVVNRKVTAIAPGTVVTVNNLFANCLPRRQGLPTPTQQIKAVQNVVQQIALC 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY- 236 +P+V++ + + S P+ + QV D +++ + + + Sbjct: 184 HPQVTYQVWQNYREWFTIYSGLSVEKIIPQILPQVRQSDLKEVQLKVPNSQSPVPSRDVA 243 Query: 237 -----------TGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 G+P +R + V INGR ++ + TI +A+ T+P RYPV Sbjct: 244 CSVSTPLSTLVIGLPDRCHRNRPDWVKVAINGRIIKSPELEQTIFSAFHRTLPRDRYPVC 303 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 L L + P Q++ N HPAK+ I + + I Q+I +A+ + + +S Sbjct: 304 FLHLTVSPDQINWNRHPAKTEIYLNGLSYWQEQITQAINQALLISEANIKESVYTTRVSK 363 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 Q K N + +++ Sbjct: 364 LLQVAEAKGS-------------------------------------YNFNYKSTDSNTK 386 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 L A AQ+ YI+++ + G+ +V+QH AHER+++E++ ++ I S +L Sbjct: 387 NLLQAVAQVSNTYIVAEHSGGMWLVEQHIAHERVLYEQLCDNWQIVPIESPIIL------ 440 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L L LG+ E FG A+R IPA+L + D + +++ S Sbjct: 441 -----YQLSSAQVTQLQSLGLDIEPFGEKLWAVRNIPAMLQHRE------DSCEALLELS 489 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 LQ + AC +IR+G M EM +LL + ++ N C HGRP ++ L+ Sbjct: 490 WGGDLQTAQVAV----ACRTAIRNGTPMNLPEMQQLLNDWQRTRNPRTCPHGRPIYLSLE 545 Query: 585 LSDIEKLFGR 594 S + + F R Sbjct: 546 ESALSRFFRR 555 >gi|94676529|ref|YP_589012.1| DNA mismatch repair protein MutL [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123384113|sp|Q1LSQ2|MUTL_BAUCH RecName: Full=DNA mismatch repair protein mutL gi|94219679|gb|ABF13838.1| DNA mismatch repair protein MutL [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 602 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 166/557 (29%), Positives = 274/557 (49%), Gaps = 22/557 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+I +LS ++INQIAAGE++ERP+ +KELIENSLDA ++R++ + GG +I DNG Sbjct: 1 MQIHRLSPQLINQIAAGEVVERPASVVKELIENSLDAGATRIDIEVELGGAKVIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 +G++ ++I +AV RH TSKIS +D I + GFRGEAL SI +V+HL L SR + N Sbjct: 61 YGISKKDIVLAVARHTTSKISSIEDLECIKSMGFRGEALASISSVAHLNLTSRTAKQNEA 120 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ + + P+A GT VEV DLF+ PAR F+++EQ E I +VIRRMA+ Sbjct: 121 WQVYTERYTEKVMLLPIAHPVGTTVEVLDLFYNTPARRKFMRAEQTEFKHIEEVIRRMAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+F + R+S++ G F+NNA++++ ++ + ++QG+ Sbjct: 181 ARFDVTFILQHNNKIVQHYRAVKEPSQYWRRLSRLCGNTFVNNALKISWQNIDFSIQGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P+ Y ++N R +++K I IR AY + + P V+ + I+P+Q+D+ Sbjct: 241 EDPSC-IKLPEMQYSYVNQRIIRNKLINHAIRHAYQDQLKGPHQPSFVIFIVINPQQLDI 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ---------- 347 NVHPAK I+F + +FI Q++ + ++ +S + Sbjct: 300 NVHPAKKEIKFYEARKVHHFIYQALMTVLQQRVKLSSDTCYSTTQKPIGKIIPSHALNQL 359 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQ-ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 + L Y+ + N E L Q + + N Y Sbjct: 360 NEGKNNILVSYSAAAKNADELLSNQIIQDPDEAKMQDIPAKCQATKNSCSTSLSNDFYSF 419 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 G Y + ++ GL ++ A + ++ + NS I +Q LL P I L Sbjct: 420 GKMLTFCSPCYALLESAQGLSLLSLQFAERYITERQLTPENNSDTILAQPLLIPLRIILS 479 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP-AILSKKNIPQLLRDIIDEIIDSST 525 GE + + +H L R+GI + N + +P +L KKN+ L+ D++ + + ++ Sbjct: 480 NGEASALHQHRLLLQRMGILLQP-NENETILNAVPLPLLRKKNLSNLILDLLRYLNNETS 538 Query: 526 TYTLQDRIENILATMAC 542 I + +AC Sbjct: 539 VT-----YHKIASWLAC 550 >gi|291294832|ref|YP_003506230.1| DNA mismatch repair protein MutL [Meiothermus ruber DSM 1279] gi|290469791|gb|ADD27210.1| DNA mismatch repair protein MutL [Meiothermus ruber DSM 1279] Length = 544 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 165/593 (27%), Positives = 265/593 (44%), Gaps = 66/593 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL ++I +IAAGE+I P+ ++EL+EN+LDA ++R+ + GGG + DNG G Sbjct: 2 IRKLPPELIREIAAGEVISGPADVVRELLENALDAGATRLYIELWGGGLDKIVVRDNGLG 61 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + EE+ +A++ H TSK++ D NI T GFRGE L +I + + L SRPPQ GA + Sbjct: 62 IPREELGLALEHHTTSKLT-DLQNIRTLGFRGEGLWAIRQAARVRLTSRPPQQLGGATLT 120 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 +K GT VEV LF +PAR N L++ E + ++ R + P++ Sbjct: 121 AFQDKTELHEH-PAPAGTQVEVTALFCHLPARRNALEAPAAEGRKVVHLVSRYLLHRPEI 179 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 + + G F E I + G N + L TL+G P Sbjct: 180 ALRLVVDGEEK----IAHAGGGFAEVIKLLWGSVVANRLLPLEAAEGPFTLRGLLSRPEL 235 Query: 243 NRGNANQFYVFINGRTV-QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 +R ++ + +N R V + +L + AY E +P G++PV VL LEI + +N P Sbjct: 236 SRPRRDRLLLALNRRPVEWPEPLLQAVLAAYKELLPAGQFPVGVLNLEIPTEHLLINTSP 295 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 KS +R P I F+ Q++Q ++ ++ + P T Sbjct: 296 DKSRVRLIRPEAILGFVSQAVQGLLSAHPLARALPE------------------PAPLTG 337 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 Q F + + Y++++ Sbjct: 338 PAPVQRVRFPR----------------------------------LRYLGSFRELYLLAE 363 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 D L +VDQHAAHER+++E++ + + L PE++ L GE + E E L Sbjct: 364 AGDELYVVDQHAAHERILYEELSRRYLEEPP--LELPHPELLSLSLGEEMNLAERLEALE 421 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 + G++ E FGP +R IPA L+ P L+ +++ S + +LA +A Sbjct: 422 QAGLQIEPFGPGKYRVRTIPAFLAG--YPSLVGEVV---KGSLGASSFAVAWRTVLARLA 476 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C +I++G + S LL + C HGRPT + L ++ + FGR Sbjct: 477 CLPAIKAGHPLSSASAQALLDALAGCELPWVCPHGRPTVLVLGEGELARRFGR 529 >gi|262163596|ref|ZP_06031339.1| DNA mismatch repair protein MutL [Vibrio mimicus VM223] gi|262027963|gb|EEY46625.1| DNA mismatch repair protein MutL [Vibrio mimicus VM223] Length = 653 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 161/567 (28%), Positives = 259/567 (45%), Gaps = 68/567 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGVDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVTQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + ST +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKMVRQYRAASTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI------------------------NKKGIST 333 NVHPAK +RF ++ +FI Q++ A+ + ++ Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQSAQVIAPSINDGAFHLPNVEEDAEASVAE 360 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ--------------------- 372 + + Q P+ A E Q Sbjct: 361 PATTEASVQKRVWQAAQNTPTYPRKAPRDEEESESEHYQLRERAVTNPWVTSPRTAYSNK 420 Query: 373 ----------------ENRLSTNDLLPSDDPTYSEDNDPVE--ESEATHYQLGIACAQIH 414 +N + T DL D + ++ ++E +LG A + Sbjct: 421 EKYGSVSVSKKEAVAYQNLMQTPDLSDEDPNSSPVSTSSLQTTKTEIVIEKLGKAIQVVE 480 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Y++ ++ G V++ H A + + + + +Q LL P + L E E + Sbjct: 481 GEYLLMSSSQGCVLISLHQAQVVKL--RGLLNAQHGALKAQPLLVPLSLKLRESEWQVAQ 538 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIP 501 H E LH+LGI+ + ++I + +P Sbjct: 539 THLESLHQLGIELKTRANHSIMVMAVP 565 >gi|67920569|ref|ZP_00514089.1| DNA mismatch repair protein [Crocosphaera watsonii WH 8501] gi|67858053|gb|EAM53292.1| DNA mismatch repair protein [Crocosphaera watsonii WH 8501] Length = 554 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 153/600 (25%), Positives = 274/600 (45%), Gaps = 66/600 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ LS +IIN IAAGE+I+ + ++EL+EN++DA+++R+ + + DNG Sbjct: 4 PIQLLSPEIINLIAAGEVIDSLAAVVRELLENAIDAQATRLTVSVF-PELWQVMVADNGR 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSR--PPQNNT 117 GM+ + + Q H TSKI DD I + GFRGEAL SI V LT+ SR +N Sbjct: 63 GMSLDNLRHCAQAHHTSKIFDLDDLWKITSLGFRGEALFSIAQVGQLTIQSRDATNDSNG 122 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 ++S M PGTIV LF T+P R L + + I ++ +++ Sbjct: 123 WLVNYNQQGEMSEESTAPMAPGTIVTASHLFGTMPVRRQGLPTFSQQLKAIQGIVENLSL 182 Query: 178 AYPKVSFTFSTIKSNRYKMNF-QSTNGNFPERISQVIGEDFINNAVE-LNEKSNEITLQG 235 +P++++ K + ++ +++ P+ + +V D + + ++ Sbjct: 183 CHPQITWQVHHNKKSWLSISPGKTSQHILPQLLKRVHFNDLQFLCETVITPSHEQAKIEM 242 Query: 236 YTGIPTFNRGNA-NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G+P + + +NGR V+ + T+ + T+P GR+PV L L I P + Sbjct: 243 VLGLPDRTSRGRLDWLKIAVNGRVVRSPQLEQTMLAGLSRTLPKGRFPVGFLHLIIPPSE 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 +D N HPAK+ I ++ + + + I KA+ I+ S Sbjct: 303 IDWNRHPAKTEIYLKSLEFWQERVTEVIDKALKLSPITIS-------------------- 342 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 T Q + + + S N + + + S + + ++ A Q++ Sbjct: 343 --------TGEQNQRVKKLLKASENKGVYNLGHSESNELELIQ---------LRAVGQVN 385 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Q YI+++ + GL +V+QH AHER+++EK++ ++ + +LT + Sbjct: 386 QTYIVAEHSHGLWLVEQHIAHERILYEKLQDEWQLIPVQQAIILTQISLK---------- 435 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 E L R+G+ E FG N A+R +P +L + D D +I+ S L+ Sbjct: 436 -QVEQLQRIGLDIEPFGDNTWAVRNVPKLLENRE------DCPDALIELSLGGDLESAQV 488 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + AC ++R+G ++ +M +L +K N C HGRP ++ L+ S + + F R Sbjct: 489 AV----ACRSALRNGTVLELSQMQEILNNWKKTRNPRTCPHGRPIYLPLEESSLSRFFRR 544 >gi|170717827|ref|YP_001784888.1| DNA mismatch repair protein [Haemophilus somnus 2336] gi|189030401|sp|B0UUU5|MUTL_HAES2 RecName: Full=DNA mismatch repair protein mutL gi|168825956|gb|ACA31327.1| DNA mismatch repair protein MutL [Haemophilus somnus 2336] Length = 615 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 160/555 (28%), Positives = 262/555 (47%), Gaps = 33/555 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KELIENSLDA ++ ++ I GG + +I DNG Sbjct: 1 MTIKILPPQLANQIAAGEVVERPASVVKELIENSLDAGATHIQIEIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Q N Sbjct: 61 IGIAKDELHLALARHATSKIASLDDLEMILSLGFRGEALASISSVSRLTLTSRTAQQNEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETSITPASHPIGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A P+V+FT + ++ TN +RI+ + G DF+ NA+ ++ K N++ L G+ Sbjct: 181 AKPQVAFTLTHNNKLIHRYKSAVTNEQKIKRIATICGNDFMQNALHIDWKHNDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F R + Y +INGR V+DK I IR AY+E + +YP VL ++++P +VDV Sbjct: 241 IQPQFARHQNDLNYCYINGRMVKDKVITHAIRQAYSEYLSNEKYPAFVLFIDLNPNEVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RF +I +FI Q + A+ + + + + + Sbjct: 301 NVHPTKHEVRFHQARLIHDFIYQGMTNALTSEQTNIPIQSEQSNPTKVAEPQGIWNLTTH 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP---------------VEESEAT 402 + + +F Q+ + + ++ E + Sbjct: 361 NKGNRATAGKNIFAQQPKDYDKKSSQFKPHFAANYSEVTPKKAVQKAYAELLATHEEKTI 420 Query: 403 HYQLGIACAQIHQNYIISQTT--DGLVIVDQHAAHERLIFEKM------------RQDFN 448 + +I Q L +++ A + + R Sbjct: 421 ASSTLPHQFTHNATHISEQKNVLHALALIENKALLLQQNQQYFLLSIQALQHFNIRLQLQ 480 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG-PNAIAIREIPAILSKK 507 + I QTLL P ++ L + + + + G I + +P L + Sbjct: 481 QSNIAQQTLLIPILLRLNKQQYQSWQQQALFFQQSGFDFTDNSAQRRITLNRLPICLRTQ 540 Query: 508 NIPQLLRDIIDEIID 522 NI +++ ++D+ + Sbjct: 541 NIQKIILQLLDQPHE 555 >gi|16329972|ref|NP_440700.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803] gi|1652458|dbj|BAA17380.1| DNA mismatch repair protein; MutL [Synechocystis sp. PCC 6803] Length = 563 Score = 385 bits (989), Expect = e-104, Method: Composition-based stats. Identities = 149/604 (24%), Positives = 268/604 (44%), Gaps = 72/604 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L ++++ IAAGE+I+ P ++EL+EN+LDA + R+ + + ++ DNG G Sbjct: 9 IQVLDRQLVDLIAAGEVIDSPLAVVRELVENALDAGADRILVRVWWD-QWRLEVLDNGQG 67 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN-TGA 119 M E+ +V H TSKIS D I T GFRGEAL S+ V+ LT+ SR + G Sbjct: 68 MDVTELKTSVLPHATSKISTQADLQRIKTLGFRGEALHSLAQVARLTISSRSVASPGCGW 127 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I S + + PVA+ GT VEVR LF P R Q + ++++A+ Sbjct: 128 RITYSPQGSPEQIEPVAIAMGTRVEVRQLFANFPQRRQAFAKSQQFWRPMVTYLQQLALC 187 Query: 179 YPKVSFTFSTIKSNRYKMNFQS-TNGNFPERISQVIGEDFINNA------VELNEKSNEI 231 +P+V++ + R ++ + + + V+L ++ Sbjct: 188 HPQVTWQLWQDERLRLSLSPGPNPEAILLQCLKSLQAGQLGYTQQSLSLPVDLENQATSA 247 Query: 232 TLQGYTGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 L G P +R + + INGR V + TI + T+P RYP+ ++ Sbjct: 248 QLSLTFGYPDRCHRPRPDWLIIAINGRPVNVPELTQTILAVFHRTLPRQRYPLCFAHWQL 307 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 P+ +D + HPAK+ I ++ + + + +++ G Sbjct: 308 PPQCIDWHRHPAKTEIYLQDLPHWQGQLKTLLHQSLAILGNDAP---------------- 351 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC 410 P+ L + K Q S+ + E+ + + A Sbjct: 352 -----PRLNQLLKAAEPKGVYQLQGASS-----------------LTETVLGYPKAFKAI 389 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 AQ+ Q Y++ + G+ +V+QH AHER++FE++++ + + +L Sbjct: 390 AQVCQTYVVVEHDQGIWLVEQHVAHERVLFEQLQRHWQCLPLEQPLVLQGFNP------- 442 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 E E L LG++ + FG + A+R +PA+L + +II + + S ++L Sbjct: 443 ----EQVERLQNLGLEIDPFGEDIWAVRSLPALLQGQE------EIIAILRELSQVFSLS 492 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 A +AC +I++G ++ I +N+L+ + ++ N C HGRP ++ L S + + Sbjct: 493 T----AQAAIACRSAIKNGMELDRIAINKLIEQWQQCDNPHTCPHGRPIYLALDESSLAR 548 Query: 591 LFGR 594 F R Sbjct: 549 FFRR 552 >gi|20455503|sp|P73349|MUTL_SYNY3 RecName: Full=DNA mismatch repair protein mutL Length = 556 Score = 385 bits (989), Expect = e-104, Method: Composition-based stats. Identities = 149/604 (24%), Positives = 268/604 (44%), Gaps = 72/604 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L ++++ IAAGE+I+ P ++EL+EN+LDA + R+ + + ++ DNG G Sbjct: 2 IQVLDRQLVDLIAAGEVIDSPLAVVRELVENALDAGADRILVRVWWD-QWRLEVLDNGQG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN-TGA 119 M E+ +V H TSKIS D I T GFRGEAL S+ V+ LT+ SR + G Sbjct: 61 MDVTELKTSVLPHATSKISTQADLQRIKTLGFRGEALHSLAQVARLTISSRSVASPGCGW 120 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I S + + PVA+ GT VEVR LF P R Q + ++++A+ Sbjct: 121 RITYSPQGSPEQIEPVAIAMGTRVEVRQLFANFPQRRQAFAKSQQFWRPMVTYLQQLALC 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQS-TNGNFPERISQVIGEDFINNA------VELNEKSNEI 231 +P+V++ + R ++ + + + V+L ++ Sbjct: 181 HPQVTWQLWQDERLRLSLSPGPNPEAILLQCLKSLQAGQLGYTQQSLSLPVDLENQATSA 240 Query: 232 TLQGYTGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 L G P +R + + INGR V + TI + T+P RYP+ ++ Sbjct: 241 QLSLTFGYPDRCHRPRPDWLIIAINGRPVNVPELTQTILAVFHRTLPRQRYPLCFAHWQL 300 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 P+ +D + HPAK+ I ++ + + + +++ G Sbjct: 301 PPQCIDWHRHPAKTEIYLQDLPHWQGQLKTLLHQSLAILGNDAP---------------- 344 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC 410 P+ L + K Q S+ + E+ + + A Sbjct: 345 -----PRLNQLLKAAEPKGVYQLQGASS-----------------LTETVLGYPKAFKAI 382 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 AQ+ Q Y++ + G+ +V+QH AHER++FE++++ + + +L Sbjct: 383 AQVCQTYVVVEHDQGIWLVEQHVAHERVLFEQLQRHWQCLPLEQPLVLQGFNP------- 435 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 E E L LG++ + FG + A+R +PA+L + +II + + S ++L Sbjct: 436 ----EQVERLQNLGLEIDPFGEDIWAVRSLPALLQGQE------EIIAILRELSQVFSLS 485 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 A +AC +I++G ++ I +N+L+ + ++ N C HGRP ++ L S + + Sbjct: 486 T----AQAAIACRSAIKNGMELDRIAINKLIEQWQQCDNPHTCPHGRPIYLALDESSLAR 541 Query: 591 LFGR 594 F R Sbjct: 542 FFRR 545 >gi|261823153|ref|YP_003261259.1| DNA mismatch repair protein [Pectobacterium wasabiae WPP163] gi|261607166|gb|ACX89652.1| DNA mismatch repair protein MutL [Pectobacterium wasabiae WPP163] Length = 661 Score = 385 bits (988), Expect = e-104, Method: Composition-based stats. Identities = 127/380 (33%), Positives = 204/380 (53%), Gaps = 3/380 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + + Sbjct: 61 SGIGKDELTLALARHATSKITTLDDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQSEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ T + + R+ + G F+ +A+ ++ + +++T+ G+ Sbjct: 181 ARFDVAITLHHNGKLMRQYRAAPDKSQYERRLGTICGATFLQHALAVSWQHDDLTIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++N R ++D+ I IR AY + + + P VL LEIDP QVDV Sbjct: 241 ADPVGAKQLPDMQYCYVNQRMMRDRLINHAIRQAYQDQLRDDQQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ + + S + + + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVMSVLQQASAPGSGMTESETEKPVQWQQENRPAAGE 360 Query: 358 YATSLTNTQEKLFLQENRLS 377 + + EK E + Sbjct: 361 NHFAQPSRTEKSSSAEGKTP 380 >gi|332290020|ref|YP_004420872.1| DNA mismatch repair protein [Gallibacterium anatis UMN179] gi|330432916|gb|AEC17975.1| DNA mismatch repair protein [Gallibacterium anatis UMN179] Length = 621 Score = 385 bits (988), Expect = e-104, Method: Composition-based stats. Identities = 160/566 (28%), Positives = 272/566 (48%), Gaps = 44/566 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + NQIAAGE++ERP+ +KELIENSLDA + +++ I G +I DNG Sbjct: 1 MPIQILPPLLANQIAAGEVVERPASVVKELIENSLDAGADKIQIDIEQSGSRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 +G+ EI +++ RH TSKI+ DD NI + GFRGEAL SI +VS LTL SR + N Sbjct: 61 YGIAKAEIQLSLVRHATSKIATLDDLENILSLGFRGEALASISSVSRLTLTSRTAEQNEA 120 Query: 119 AQIAISGEKISSVR-PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G+++ + P + GT VEV +LFF PAR FL+S++ E I +V++R+A+ Sbjct: 121 WQVYAQGQEMDTTIVPASHPVGTTVEVENLFFNTPARRKFLRSDKTEFAHIDEVVKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A P V FT + ++ + + +R++ + G DF +A+ ++ + E+ LQG+ Sbjct: 181 AKPTVHFTLTHNGKLIHQYKAANDTNSQLKRLAAICGNDFTEHALRIDWQYEEMHLQGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F R + Y ++NGR ++DK IL +R AYA+ + +YP VL L++DP VDV Sbjct: 241 AEPRFFRSQNDFNYSYVNGRMMKDKVILHAVRQAYADYLSPDQYPAFVLFLDLDPTLVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI-------NKKGISTSSVLSKKMISSFHQDNA 350 NVHP K +RF ++ +FI+Q + A+ + ST V ++K + Sbjct: 301 NVHPTKHEVRFHQARLVHDFILQGVANALAQTSELFAQNDESTMIVEAEKSQHIAEPNAH 360 Query: 351 PKTHL-------PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 + P + + E +F NR ++ +D Y + ++ + + Sbjct: 361 YQPTFNTNNAFPPAFKNNRQAAGENIFNANNRWASTSSSQNDKTAYRQYEKLLQSAHSDE 420 Query: 404 YQLGIACAQIHQNYI------------------------ISQTTDGLVIVDQHAAHERLI 439 + + N I + Q L +Q Sbjct: 421 QISSTSISNNRPNAIESTVIEPSSNLTEQNDERLKVLTLLPQGYLCLQQQEQLYLLSVQK 480 Query: 440 FEKMRQDFNSTKIT--SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 +++ + Q LL P L + ++ + G + +R+ I I Sbjct: 481 LQQLHCHLQLQQADKSMQALLIPTTFQLDNSQLDTFHQYQAFFSQAGFQIQRY-EQRITI 539 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDS 523 ++ L ++N+ Q++ ++++ +D Sbjct: 540 TQVAMPLRQQNLQQIVMSLLNQTVDD 565 >gi|253690084|ref|YP_003019274.1| DNA mismatch repair protein MutL [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259511146|sp|C6DFJ9|MUTL_PECCP RecName: Full=DNA mismatch repair protein mutL gi|251756662|gb|ACT14738.1| DNA mismatch repair protein MutL [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 669 Score = 385 bits (988), Expect = e-104, Method: Composition-based stats. Identities = 126/410 (30%), Positives = 206/410 (50%), Gaps = 6/410 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + + Sbjct: 61 SGIGKDELTLALARHATSKIATLDDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQSEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ T + + R+ + G F+ +A+ ++ + ++T+ G+ Sbjct: 181 ARFDVAITLHHNGKLIRQYRAAPDKSQYERRLGNICGATFLQHALAVSWQHGDLTIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++N R ++D+ I IR AY + + + P VL LEIDP QVDV Sbjct: 241 ADPVGAKQLPDMQYCYVNQRMMRDRLINHAIRQAYQDQLSDDQQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ + + +++ L + + + P Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVMSVLQQ---ASAPGLGMTSPETGKPVQWQQENRPA 357 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 + + + + + G Sbjct: 358 AGENHFAQPPRTDNSPSYGGKTPRAGHSGQAKESAYSGYQPENPYQKKQG 407 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 73/211 (34%), Gaps = 23/211 (10%) Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 + + + + E+ G Y + + GL ++ Sbjct: 449 VSHDSPPNRTAPDATTSSSKPRAPIESPLESQSNGFGRVLTVYPPCYALLEYHKGLAMLS 508 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 A L ++ + + +Q LL P+ + L + E +++ H L R GI Sbjct: 509 LSVAERHLKAVQL--TPSEEGLRAQPLLIPQRLTLSKSELSVLSAHHALLARFGIDVLVE 566 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 A +R +P L ++N+ L+ ++I + + T T Q + + MA Sbjct: 567 SQRA-TLRAVPLPLRQQNLQNLISELIGYLANYQTVETQQVEPGELASWMA--------T 617 Query: 551 KM-------QSIEMNRLLREMEKNPNSSQCN 574 ++ + +LL ++E+ C Sbjct: 618 RLQSEQESWSHSQAIQLLADVERL-----CP 643 >gi|315178346|gb|ADT85260.1| DNA mismatch repair protein MutL [Vibrio furnissii NCTC 11218] Length = 649 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 162/580 (27%), Positives = 271/580 (46%), Gaps = 66/580 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 CGIDKDELGLALSRHATSKIHTLDDLEAIISLGFRGEALASISSVSRLTLTSRTATQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMQVQLQPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+F + T +RI+ V G F+ N +++ + L G+ Sbjct: 181 SRFDVTFNLRHNGKLVRQYRAAKTEIQLEKRIAAVCGSAFVRNMLKIELAHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPDGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRPDQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT---- 353 NVHPAK +RF ++ +FI Q++ A+ + + ++ S+FH + P+ Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALAESQHIDAPAHNE---SAFHYHDEPEQTSAI 357 Query: 354 ---------------------------------HLPKYATSLTNTQEKLFLQENRLSTND 380 PK++ + ++ K + R+S Sbjct: 358 SERVTQAVESTPAYPGRSDYERPAREATRDQVREAPKHSAWVESSPAKRKPAQERVSAPS 417 Query: 381 LLPSDDPTYS---------------------EDNDPVEESEATHYQLGIACAQIHQNYII 419 ++ Y ++ P+E T QLG A A + Y++ Sbjct: 418 PSQAEVRAYQALMKTPDVAVPTPAEHRPSTPSEHTPLEHETFTVQQLGKAIAVVRGCYLL 477 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 T G V++ A + ++ + + SQ LL P + + E + + Sbjct: 478 MNTPQGCVLLSLRVAAWLRVRGQL--NAQHEPLKSQPLLVPLSLKMSASEANALEQSQLL 535 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 L +LG++ + P ++ + +P L ++N+ L+ D++ Sbjct: 536 LTQLGLELKPRHPGSLMVMGVPQPLRQQNLQLLIPDLLSY 575 >gi|323491080|ref|ZP_08096271.1| DNA mismatch repair protein [Vibrio brasiliensis LMG 20546] gi|323314660|gb|EGA67733.1| DNA mismatch repair protein [Vibrio brasiliensis LMG 20546] Length = 649 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 159/655 (24%), Positives = 278/655 (42%), Gaps = 90/655 (13%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +V+ LT+ SRP Sbjct: 61 KGIVKDELGLALSRHATSKIHTLDDLEAIISLGFRGEALASISSVARLTMTSRPATQEQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMQVKLQPAAHPIGTSVEVLDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + T +RI+ V G F+ N +++ + + L G+ Sbjct: 181 SRFDVTINVRHNGKLVKQYRAAKTEAQAEKRIAAVCGNAFVRNMLKIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRPDQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS---------------------TSSV 336 NVHPAK +RF ++ +FI Q++ A+ + ++ Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSDALAQSAHIDKPQQTASAFHIEQPQVEDSHQATE 360 Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL-------------------- 376 + Q+ +P Y + L+E++ Sbjct: 361 AVAEEPRVSRQEYQAIESVPSYPGKADYQASRESLRESKPRHEWQESRSDSKPRVTERYS 420 Query: 377 ----------STNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGL 426 + +LL + + + V + ++ + + Q L Sbjct: 421 EPAPSKQEVKAYQELLKTPEFDSAPVEQQVANDTQAEPMVSERVERLGKAICVVQGRY-L 479 Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL--- 483 V+ D + K ++ + L+ L E E +L Sbjct: 480 VMGD-KTGTRLVNLAKAEWLRIKGQLATHHGALKSQPLLVPLSLKLDPEPLEVAEKLEPV 538 Query: 484 ----GIKAERFGPNAIAIREIPAILSKKNIPQLLRDII----------DEIIDSSTTYTL 529 GI+ + A+ + +P L ++N+ QL+ D++ + + D + L Sbjct: 539 LKMFGIELKSRANKALMVMGVPQPLRQQNLQQLVPDLLSYAASHMATSNSLSDPQLSTWL 598 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC--NHGRPTFIK 582 DRI ++S + E +++ ++E+ Q G TF++ Sbjct: 599 SDRITQ----------VKSDYTLS--EAIQIIADLEQL---WQDRLPLGDATFVR 638 >gi|227326201|ref|ZP_03830225.1| DNA mismatch repair protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 670 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 128/406 (31%), Positives = 211/406 (51%), Gaps = 6/406 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + + Sbjct: 61 SGIGKDELTLALARHATSKIATLDDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQSEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ T + + R+ + G F+ +A+ ++ + ++T+ G+ Sbjct: 181 ARFDVAITLHHNGKLMRQYRAAPDKSQYERRLGSICGATFLQHALAVSWQHGDLTIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++N R ++D+ I IR AY + + + P VL LEIDP QVDV Sbjct: 241 AEPVGAKQLPDMQYCYVNQRMMRDRLINHAIRQAYQDQLSDDQQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ + + + + +T + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVMSVLQQASSPALGMTEPETGKPVQWQQENRTAAGE 360 Query: 358 ---YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 S T++ + R + + + +P ++ + Sbjct: 361 NHFAQPSRTDSSPSYGGKTPRAGHSGSARESAYSGYQPENPYQKKQ 406 >gi|300774460|ref|ZP_07084323.1| DNA mismatch repair protein MutL [Chryseobacterium gleum ATCC 35910] gi|300506275|gb|EFK37410.1| DNA mismatch repair protein MutL [Chryseobacterium gleum ATCC 35910] Length = 597 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 141/602 (23%), Positives = 260/602 (43%), Gaps = 21/602 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + + NQIAAGE+++RP+ +KEL+EN++DA+++++E +I GK+ Q+ D+G G Sbjct: 5 IQLLPDHVANQIAAGEVVQRPASIVKELLENAIDADATKIELIIRDAGKNLIQVVDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKI ++D I T GFRGEAL SI AVS + L ++ + G Sbjct: 65 MSETDARMAFERHATSKIKGTEDIFRIATKGFRGEALASIAAVSQVELRTKQKDTSIGTN 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G PV G+ V++LF+ +PAR FLK+ +E + D +R+A+A+ Sbjct: 125 IYIEGGVFQFQDPVQTADGSNFLVKNLFYNVPARRKFLKNNNIEFRHVIDEFQRVALAHE 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F+ +++ G+ +RI V G + + E L G+ P Sbjct: 185 NLEFSLFHDDEAVFRLR----KGSQMQRIVDVFGRKLQPLLIPIKEDIIWCKLHGFVAKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + ++F+NGR + + ++ A+ + G P L LE+DP ++DVN+H Sbjct: 241 EGAKKARGEQFLFVNGRYFRSPYFNKAVQEAFEGLLQPGYVPSFFLFLELDPEKIDVNIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---------SKKMISSFHQDNAP 351 P K+ ++F + +I + +I++++ +S S K I S Sbjct: 301 PQKTEVKFEDEHLIFALLRSTIKRSLGIYNVSPSLDFDRDPELDEMMNKPIPSKSNSGGS 360 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT-HYQLGIAC 410 + + + ++N + ++ + + + Sbjct: 361 GSVIKMPEIIVDKDYNPFLEEKNVVHPEEIQNLTEMYHQNITAEPSKINLFEDEDFDEDL 420 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 ++ Y + D +++D H LI E + S+ S LL + E E Sbjct: 421 MRLPNGYWLFNKGDVTLMLDLGRMHRLLISESNKSVRKSSTN-SHALLFSLEYHMNEIEK 479 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 + L LG + + + I +P L + + L + + EI+D T Sbjct: 480 TKYNAIKKYLPELGFDMKIAHESVLRIDSLPEGLKETQAMKFLEN-LFEILDYKTEEEFM 538 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 N M R + + +L+++ G+ F ++ +D + Sbjct: 539 QYYHNQWNKMQSKS--RF-DFIYKKDAEQLIKDFTALGFPEFLPDGKRCFYEVPFNDFKN 595 Query: 591 LF 592 F Sbjct: 596 KF 597 >gi|157373934|ref|YP_001472534.1| DNA mismatch repair protein MutL [Shewanella sediminis HAW-EB3] gi|189030416|sp|A8FRD3|MUTL_SHESH RecName: Full=DNA mismatch repair protein mutL gi|157316308|gb|ABV35406.1| DNA mismatch repair protein MutL [Shewanella sediminis HAW-EB3] Length = 624 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 163/590 (27%), Positives = 281/590 (47%), Gaps = 58/590 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ IKEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MTIQILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIKIHDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ E++ +A+ RH TSK+S DD I +FGFRGEAL SI +VS LTL SR Sbjct: 61 SGISKEDLGLALSRHATSKLSSLDDLDAILSFGFRGEALASISSVSRLTLTSRTADQVEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + V P A G+ VE DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAYAEGSDMAVKVIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT +T + +R++Q+ G+ F A+E+N + +++ L GY Sbjct: 181 VRSDIHFTLKHNGKVVRNYRATNTQDQYLQRLAQISGKKFAEQAIEINCQHDDLKLTGYV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F ++ Y ++NGR V+D+ + +R A+AE G VL+LE+DP QVDV Sbjct: 241 QSPFFETPASDTQYFYVNGRLVRDRLVNHAVRQAFAEH-ETGEQASYVLMLELDPHQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--------------------------- 330 NVHPAK +RF + ++I Q++Q A+++ G Sbjct: 300 NVHPAKHEVRFHQSRYVHDYIFQALQSALHQVGRLAIDSDNKLDTDSHSQSHERGHSAYG 359 Query: 331 --ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENR--LSTNDLLPSDD 386 + S ++ + +T+ ++++ ++ ++R +++ ++ Sbjct: 360 VAEPSHSRHDYSHQTAPSTKASTETNRERFSSPISAVPSHTSDVQSRGGATSSYRQQAEL 419 Query: 387 PTYSEDNDPVEESEATHYQLGI-----------ACAQIHQNYIISQTTDGLVIVDQHAAH 435 P+ + E + G + Y + + L+++ Sbjct: 420 PSAAAIASYAELLKTPDVDQGNRGNKELQANVSMPPILAGQYWVLTQEEQLLLLPVRIIS 479 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE-RFGPNA 494 L+ ++ +S + SQ LL P I + E + E + L ++GI+ R G Sbjct: 480 TWLLQHEISNKLDS-GLVSQPLLMPVSISMDETWSDTLAERELLLRKIGIEVTIRLGQ-- 536 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY 543 + I+++P L + + ++ D++ + ++ LA+ +A + Sbjct: 537 LIIKKVPPYLRQSQLVAVIPDLLQWL-------RFEEPSNEALASWLAKH 579 >gi|56459442|ref|YP_154723.1| DNA mismatch repair enzyme, ATPase [Idiomarina loihiensis L2TR] gi|81821676|sp|Q5QW89|MUTL_IDILO RecName: Full=DNA mismatch repair protein mutL gi|56178452|gb|AAV81174.1| DNA mismatch repair enzyme, ATPase [Idiomarina loihiensis L2TR] Length = 577 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 153/539 (28%), Positives = 264/539 (48%), Gaps = 11/539 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++L ++ NQIAAGE++ERPS +KEL+EN+LDA ++++ I GG +I DNG Sbjct: 1 MAIQQLPIELANQIAAGEVVERPSSVVKELVENALDAGATQLILDIEQGGSKRIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD +I + GFRGEAL SI +VS L L+S+PP+ Sbjct: 61 GGIVKQELTLALSRHATSKIQSLDDLEHIGSLGFRGEALASISSVSRLRLISKPPEQEEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V P A GT V+++DLFF PAR FL++E+ E + I +VI+R+A+ Sbjct: 121 WQAWAEGRDMQVTVEPAAHPDGTTVDIQDLFFNTPARRKFLRTEKTEFSHIDEVIKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + +V F + + T +R++++ G F A ++ + L G+ Sbjct: 181 SRFEVGFQLNHNGKSVRAFPSAQTEKQQLQRLAKICGGGFAEQASAIDAVDGDFHLSGWL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R + + F+NGR ++DK + +R AY + +P R P VL E+ +VDV Sbjct: 241 VPPEHCRHQGDIQHFFVNGRMMRDKLLSHAVRQAYEKYLPNERVPTFVLYFELPAEEVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF + +FI+ I++A+N+ + + +S H ++ + Sbjct: 301 NVHPAKHEVRFHRQRQVHDFILTRIEQALNQLVAIENE---QPAMSHQHSYSSQERSSGA 357 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV---EESEATHYQLGIACAQIH 414 + FL E + S + L + + + E++ Q + + Sbjct: 358 TSDPYRGASGASFLGERKASGSLLPNAARVPHGNAGAQLSTEPEAKLKAEQNWRVLSVFN 417 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Y + + L ++ H + +K+ Q + Q LL P + L Sbjct: 418 DVYALIRNEYSLAWLNLAKVHTECVSKKLTQQLQD-GLNGQPLLVPVAVSLANLPGPASQ 476 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 + L++ G+ + AI I ++P +L + N+ D++ + + + T L + Sbjct: 477 WPQQQLNQCGVVYKIQREQAI-IEQMPEMLRQGNVVSGFTDLLTLLTEDAETDQLARWL 534 >gi|304414429|ref|ZP_07395698.1| DNA mismatch repair protein [Candidatus Regiella insecticola LSR1] gi|304283214|gb|EFL91614.1| DNA mismatch repair protein [Candidatus Regiella insecticola LSR1] Length = 616 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 156/601 (25%), Positives = 265/601 (44%), Gaps = 40/601 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L +I NQIAAGE++ERP+ +KEL+ENSLDA + ++ I GGG +I DNG Sbjct: 3 MLIKMLPPQITNQIAAGEVVERPASVVKELLENSLDAGAKWIDINIKGGGSKLIRIQDNG 62 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++P+A+ RH TSKIS DD I + GFRGEAL SI +VS L L SR + Sbjct: 63 TGIAKDDLPLALARHATSKISALDDLMTIRSMGFRGEALASISSVSRLLLTSRTVEQTEA 122 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + ++P A G+ +EV D F I R+ L + E I +V+RR+A+ Sbjct: 123 WQSYAEGRDMLVKIKPAAHPVGSTLEVFDFIFIIRPRVASLCVRKTEFAHIDEVVRRIAL 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + + S + +R++ V G F+ + + ++ + ++ + G+ Sbjct: 183 ARFDVTIHLHHNEKLIRQYRAVSDPTRYSQRLASVCGNVFLQHMLAISWQHEDLAIHGWL 242 Query: 238 GIPTFNRGNANQ---FYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 P + Y ++N R ++D+ I IR AY G+ VL L I+P Q Sbjct: 243 ADPQMLHNARSLNEIQYCYVNNRVIRDRLINHAIRQAYQGLSKDGQQIAYVLYLTIEPSQ 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VD+NVHPAK +RF ++ +FI Q++ A+ KG+ +S+ + + + Sbjct: 303 VDINVHPAKHEVRFHQARLVHDFIYQAVTMALQDKGLQPASIPVENGDTESKSPHRQPET 362 Query: 355 LPKYATSLTNTQEKLFLQENRL-------------------STNDLLPSDDPTYSEDNDP 395 + K Q N ST + S Sbjct: 363 RVAAGINKYAPPSKPCRQYNAANSPRGYLSRQGELYGQLLQSTTPSNTATVKDKSPQAAC 422 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 + G Y + + D + + + ER ++ + + +Q Sbjct: 423 SPLNGHDSNSFGSVLGIFPPCYALIKRGDEKIALLALSVAERC-LKQAQLTPPREGLRAQ 481 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P ++L + E H + L +GI+ F N +R + L ++N+ +L+ + Sbjct: 482 PLLIPLKLNLDKAEITAGKYHKDLLSTMGIEL-LFEQNRATLRTVSLPLRQQNLQKLIPE 540 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACY-GSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 ++ + E + A +A + GS + + +LL ++E+ C Sbjct: 541 LLSYLSQHEKIAP-----EKLAAWIAQHLGS--EHEQWSVSQAIQLLTDVERL-----CP 588 Query: 575 H 575 H Sbjct: 589 H 589 >gi|71280731|ref|YP_267089.1| DNA mismatch repair protein MutL [Colwellia psychrerythraea 34H] gi|123733831|sp|Q48A24|MUTL_COLP3 RecName: Full=DNA mismatch repair protein mutL gi|71146471|gb|AAZ26944.1| DNA mismatch repair protein MutL [Colwellia psychrerythraea 34H] Length = 652 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 170/573 (29%), Positives = 271/573 (47%), Gaps = 63/573 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L ++ NQIAAGE++ERP+ IKELIENSLDA ++ + + GG +ITDNG Sbjct: 1 MTIAILPARLANQIAAGEVVERPASVIKELIENSLDAGATSIHIDVDKGGIKKIKITDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI D I + GFRGEAL SI +V+ LTL S+P T Sbjct: 61 HGIVKEELTLALSRHATSKIKSLNDLEAIGSLGFRGEALASISSVARLTLTSKPQSQATA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G +S +++P A GT +EV DLFF PAR FL++E+ E N I +V+RR+A+ Sbjct: 121 WQAVAEGRDMSVNIKPAAHPDGTSIEVLDLFFNTPARRKFLRTEKTEFNHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+ +VSF+ + + + ST+ +R++ V G FI +AVE++ + +TL G+ Sbjct: 181 AHFEVSFSLTHNGNTVRQYRMASTHAQCIKRVAMVCGPKFIEHAVEVDCPHDNMTLSGWL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P+F+R + Y ++NGR ++DK I IR AYA+ +P YP VL L++D R+VDV Sbjct: 241 AKPSFSRSQNDLCYSYVNGRMMRDKLINHAIRQAYADLLPPDTYPAFVLFLQLDHREVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINK-----------------KGISTSSVLSKK 340 NVHP+K +RF + +FI KA+ + S L Sbjct: 301 NVHPSKHEVRFHQSRYVHDFIYSVCHKALTSALAGEELFTTADSDLALVPEQSYSSLGAN 360 Query: 341 MISSFHQDNAPKTHLPKYA--------------------------------TSLTNTQEK 368 H N P + P + + + + Sbjct: 361 DRQGSHSSNTPTLNYPSADYIRPLQHVNDASNSQSTSSYSGYGQQHKTNAISKIAASNYQ 420 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 + ++ S+ + + + + + Y + +T +G+ + Sbjct: 421 ALMTPDKGSSAQVQNTSGSDQASAQKHETTTLQNSTDQSAFLSVHQPGYALYKTENGVRV 480 Query: 429 VDQHAAHERLIFEKMRQDFNSTK----------ITSQTLLTPEIIDLLEGECALIMEHDE 478 + + + K+ + K + SQ LL P I+ L E + + ++ E Sbjct: 481 LSLFKLA-KSTYGKLVEQSWQNKTEQSDCPVECLVSQPLLLPVILSLSEQQLSFVLAEQE 539 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 L GI + N I IR+ PA+L ++++ Sbjct: 540 ILSNAGIVFIQQHKNKIQIRQFPALLREQDVSN 572 >gi|227115182|ref|ZP_03828838.1| DNA mismatch repair protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 669 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 128/406 (31%), Positives = 211/406 (51%), Gaps = 6/406 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + + Sbjct: 61 SGIGKDELTLALARHATSKIATLDDLEAIVSMGFRGEALASISSVSRLTLTSRTAEQSEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFTHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ T + + R+ + G F+ +A+ ++ + ++T+ G+ Sbjct: 181 ARFDVAITLHHNGKLIRQYRAAPDKNQYERRLGSICGATFLQHALVVSWQHGDLTIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++N R ++D+ I IR AY + + + P VL LEIDP QVDV Sbjct: 241 ADPVGAKQLPDMQYCYVNQRMMRDRLINHAIRQAYQDQLSDEQQPAYVLYLEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ + + + + +T + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVMSVLQQASSPALGITEPETGKPVQWQQENRTAAGE 360 Query: 358 ---YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 S T++ + R + + + +P ++ + Sbjct: 361 NHFAQPSRTDSSPSYGGKTPRAGHSGQAKESAYSGYQPANPYQKKQ 406 >gi|59712932|ref|YP_205708.1| DNA mismatch repair protein [Vibrio fischeri ES114] gi|71648717|sp|Q5E2C6|MUTL_VIBF1 RecName: Full=DNA mismatch repair protein mutL gi|59481033|gb|AAW86820.1| methyl-directed mismatch repair protein [Vibrio fischeri ES114] Length = 660 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 132/491 (26%), Positives = 231/491 (47%), Gaps = 16/491 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENS+DA ++R++ I GG +I DNG Sbjct: 1 MPIQILPARLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIEKGGSKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIPKDELTLALSRHATSKITSLDDLEAIVSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G +++ +P A GT ++V DLFF PAR FL++++ E I ++++R+A+ Sbjct: 121 WSAYAEGREMNVKLKPAAHPIGTTIDVVDLFFNTPARRKFLRADKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + T +R++ V G +F+ +A+E+ + E+ G+ Sbjct: 181 SRLDVTINLRHNGKMVRQYRAAQTKPQIEKRLAAVCGANFLQHALEVELEHGELKFHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R + Y ++NGR ++DK I IR Y ++P +Y +L +EI+P VDV Sbjct: 241 SSPEGARAQGDIQYCYVNGRMMKDKLINHAIRQGYESSLPANQYAAYILFIEINPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q+I A+ + V + + Q + +++ P Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAIFGALQQGASLPDVVGHIQSEAEEQQLESKESYFPP 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 + Q+ + + +L P + + + + + + Sbjct: 361 MKEYVRQPQQTHYPKSEQLRAAVESTPSYPNKAPLDSWIPK------------GNVGSSS 408 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL-LEGECALIMEH 476 S D+ + ++ N + S + + + + + Sbjct: 409 SNSTAPSRSFHTDKPTKKALSNYNELLTTQNREQRESTSQVNEQSHTFRSTQQIERVAPQ 468 Query: 477 DEDLHRLGIKA 487 + + GI Sbjct: 469 VTQVSKNGITL 479 >gi|163749345|ref|ZP_02156594.1| DNA mismatch repair protein MutL [Shewanella benthica KT99] gi|161331064|gb|EDQ01990.1| DNA mismatch repair protein MutL [Shewanella benthica KT99] Length = 616 Score = 382 bits (980), Expect = e-103, Method: Composition-based stats. Identities = 165/585 (28%), Positives = 272/585 (46%), Gaps = 52/585 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ IKEL+ENSLDA ++RV+ I GG +I D+G Sbjct: 1 MTIQILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIKIHDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSK+S DD I +FGFRGEAL SI +VS LTL SR + + Sbjct: 61 TGIPKEELSLALSRHATSKLSTLDDLDAILSFGFRGEALASISSVSRLTLTSRTAEQSEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + V P A G+ VE DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAYAEGSDMAVKVIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT T+ + +R++ + G+ F A+E+ + + L GY Sbjct: 181 VRGDIHFTLKNNGKVVRNYRPAKTSDQYLQRLALISGKKFAQQALEVKCEHEGLNLSGYI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F ++ Y ++NGR V+D+ + +R A+AE + G VL+LE+DP QVDV Sbjct: 241 QPPYFEGPASDTQYFYVNGRQVRDRLVNHAVRQAFAEHV-TGAQASYVLMLELDPHQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS------------- 344 NVHPAK +RF + +FI+Q++Q A+++ G S+ +S Sbjct: 300 NVHPAKHEVRFHQSRYVHDFILQALQSALSQVGSPVSTEDQNNREASSSSYQAGVQESQR 359 Query: 345 FHQDNAPKTHLP----------------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + HLP + + K L+ + + + Sbjct: 360 VKEPDGRAVHLPVDKGPGTSPVGTQHEYSITSPSPYSGNKSALRPSSTARPQVELPSAAA 419 Query: 389 YSEDNDPVEESEATHYQLGIACAQ-------IHQNYIISQTTDGLVIVDQHAAHERLIFE 441 + + + + Y + D L ++ A RL+ Sbjct: 420 IASYGALLTTPVVPSLGRSELVNEQPSMPPLLDARYWVLTQGDKLTLLPIEAIASRLLQI 479 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE-RFGPNAIAIREI 500 + + + SQ LL P I + + I + L ++GI+ R G + I+++ Sbjct: 480 SIFAKLD-GGLISQPLLMPVSIPMDDDWKETIELRELVLRKIGIELSIRLGQ--LIIKKV 536 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACYG 544 P L + + ++ +++ I ++ + LA+ +A +G Sbjct: 537 PPYLRQSQLVSVIPELLQWI-------RFEEPAQEALASWIAKHG 574 >gi|319775010|ref|YP_004137498.1| DNA mismatch repair protein MutL [Haemophilus influenzae F3047] gi|317449601|emb|CBY85806.1| DNA mismatch repair protein MutL [Haemophilus influenzae F3047] Length = 445 Score = 382 bits (980), Expect = e-103, Method: Composition-based stats. Identities = 140/418 (33%), Positives = 226/418 (54%), Gaps = 10/418 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ + K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIIRQYRPAEAINQQLKRVAAICGDDFVKNALRIEWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDVYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + I A+N + + S + + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGISHALNNQEQLNWHTDQSAVENREENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLF---LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 P A + N+ + Q+N+ ++ + + D ++ + Q Sbjct: 361 IRPNRAAAGQNSFAPKYHEKSQQNQPHFSNTPVFPNHVSTGYRDYRSDAPSKTEQRLY 418 >gi|223041566|ref|ZP_03611767.1| DNA mismatch repair protein [Actinobacillus minor 202] gi|198246539|gb|ACH82229.1| DNA mismatch repair protein [Actinobacillus minor 202] Length = 646 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 155/565 (27%), Positives = 268/565 (47%), Gaps = 67/565 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++++ I GG +I DNG G Sbjct: 6 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIHIEIEKGGAQLIKIRDNGCG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A+ RH TSKI+ +D I + GFRGEAL SI +VS LTL SRP Q Sbjct: 66 IAKQDLALALARHATSKIATLEDLECILSLGFRGEALASISSVSRLTLTSRPEGQAEAWQ 125 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G +++ ++P + GT V V +LFF PAR FL++++ E I +VIRR+A+A Sbjct: 126 AYAQGREMTVEIQPASHPVGTTVSVANLFFNTPARRKFLRTDKTEFQHIDEVIRRIALAK 185 Query: 180 PKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P V+F S + ++ +R++ + G+ FI A ++ + ++ L G+ Sbjct: 186 PHVTFILSHNGKVVRQYRKVLDNSVEQQQKRVAAICGDAFIQQATHIDWQHGDLHLHGWI 245 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+PT R + Y ++NGR ++DK I IR AY ++I G YP V+ L++DP VDV Sbjct: 246 GMPTLARTQNDLCYSYVNGRMMRDKTINHAIRQAYGDSIAQGDYPAFVIFLDLDPSHVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-----SSVLSKKMISSFHQDNA-- 350 NVHPAK +RF ++ +FI+Q + +A+ ++ + + + S+ QD Sbjct: 306 NVHPAKHEVRFHQGRLVHDFILQGVHQALQQQAPLALTLENRADEIHEAVPSYSQDTNRA 365 Query: 351 -----------------------------PKTHLPKYATSLTNT------------QEKL 369 +H+P ++S + +E+ Sbjct: 366 AAGENIFAGQLTSSTKYHGHSVGNGGRTTFSSHIPTKSSSPSAQRWYNELITTEKREEED 425 Query: 370 FLQENRLSTNDLLPSDDPTYSEDN-----DPVEESEATHYQLGIACAQIHQNYIISQTTD 424 F Q + D ++ + E+ + + A + Q + + + Sbjct: 426 FHQPTAIFYQDTAKQEESERLSTHVERTLPLNSETLSVPHSHATVLAIVQQQAALLKEHE 485 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 ++ + E+++ SQ+LL P + L E + A+ + E+L + G Sbjct: 486 SFFLLPLAKLGQWHWLERLK------SGESQSLLIPLTLTLEEEQSAVWFQLKEELEKWG 539 Query: 485 IKAER---FGPNAIAIREIPAILSK 506 + G +++ +P L + Sbjct: 540 FQISEKNWQGKVRLSMSAVPKGLRE 564 >gi|294634451|ref|ZP_06712987.1| DNA mismatch repair protein MutL [Edwardsiella tarda ATCC 23685] gi|291092161|gb|EFE24722.1| DNA mismatch repair protein MutL [Edwardsiella tarda ATCC 23685] Length = 649 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 156/578 (26%), Positives = 265/578 (45%), Gaps = 59/578 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ +A+ RH TSKIS DD I + GFRGEAL SI +VS LT+ SRP + Sbjct: 61 GGIGKAELALALARHATSKISTLDDLEAIVSLGFRGEALASISSVSRLTMTSRPAEQAEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G +++ +P A GT VEV DLF+ PAR FL++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGREMAVTVKPAAHPVGTTVEVLDLFYNTPARRKFLRTEKTEFAHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A ++ + + R++ + G FI +A+ + + +++++ G+ Sbjct: 181 ARFDITLSLQHNGKTVRQYRAVREGEAHERRLAAICGAPFIQHALAVTWRHDDLSIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R Y ++NGR ++D+ I IR AY + + P VL LEIDPRQVDV Sbjct: 241 AAPQGMRQIGELQYCYVNGRMMRDRLITHAIRQAYQDRLNDEHQPAYVLYLEIDPRQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSI------------------QKAINKKGISTSSVLSK 339 NVHPAK +RF ++ +FI Q++ + + + + L Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVVEVLQQASPTALTAAPAAEPTLREAEPAPRRALEN 360 Query: 340 KMISSFHQDNAPKTHLP------------------------------------KYATSLT 363 + + ++ P T P + + Sbjct: 361 RASAGENRFTRPTTEAPLAPAHAVTRGGATPRLPAGEIFRRREGELYQRLLAAERGPASR 420 Query: 364 NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTT 423 + S+ +D + + SE T LG + ++++ Sbjct: 421 AQEAAAASSPVLTSSPTPASADASPVAPSLCVADRSEMTTETLGRVLTLCAEGIALTESR 480 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 G+ +++ L+ ++ + + +Q LL P + L E E + L +L Sbjct: 481 SGVALLNLDYGRRCLLRVQLLPAADE-ALKAQPLLIPVRLTLEEAERCALQAQAGLLQQL 539 Query: 484 GIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 GI+ +A+ + +P L ++N+P+L+ ++ + Sbjct: 540 GIQLTLERQHAL-LHAVPLPLRQQNLPRLIPQLLGYLA 576 >gi|260774634|ref|ZP_05883541.1| DNA mismatch repair protein MutL [Vibrio coralliilyticus ATCC BAA-450] gi|260609424|gb|EEX35569.1| DNA mismatch repair protein MutL [Vibrio coralliilyticus ATCC BAA-450] Length = 658 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 157/607 (25%), Positives = 264/607 (43%), Gaps = 73/607 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGTKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +V+ LTL SRP + Sbjct: 61 KGIAKDELGLALSRHATSKIHSLDDLEAIMSLGFRGEALASISSVARLTLTSRPATQDQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGREMQVKLQPTAHPIGTSVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + T +RI+ V G F+ N +++ + + L G+ Sbjct: 181 SRFDVTINLRHNGKMIKQYRAAKTQVQEEKRIAAVCGNPFVRNMLKIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +EIDP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRPEQFATYVLFIEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTI----IRNFIIQSIQKA--INKKGISTSSVLSKKMISSFHQDNAP 351 NVHPAK +RF + I + ++ ++ I+K I+ S+ ++ + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSDALVQSAQIDKPDINASAFHTEPVTPEIPTPVTA 360 Query: 352 KTHLPKYA-----------TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED-------- 392 T+ + +EK ++ R + D S Sbjct: 361 DTNPVSESVYRAVEKVPAYPGQQGYEEKRQAEKERTQVREAAAKSDWVESRPVPRQKAKP 420 Query: 393 ----------------------------------------NDPVEESEATHYQLGIACAQ 412 + E LG A Sbjct: 421 EERYGEPAPSKQEVRAYKELLETPVLSQEAPPIPSELEPVTSALAEPAEAIEALGKAVCV 480 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 Y++ G +V A + ++ N + SQ LL P + L + Sbjct: 481 TQGQYLLMGDKQGARVVSMAKAEWLRVNGQL--SLNGGALKSQPLLVPLSLKLDHQQIEA 538 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE---IIDSSTTYTL 529 +H L + GI+ + +++ I +P L ++N+ QL+ D++ I ++ Sbjct: 539 SQQHHATLMQFGIELKSRNSSSLMIMGVPQPLRQQNLQQLIPDLLSYAALISENDQALPP 598 Query: 530 QDRIENI 536 Q + + Sbjct: 599 QALSDWL 605 >gi|319896480|ref|YP_004134673.1| DNA mismatch repair protein mutl [Haemophilus influenzae F3031] gi|317431982|emb|CBY80330.1| DNA mismatch repair protein MutL [Haemophilus influenzae F3031] Length = 445 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 139/418 (33%), Positives = 227/418 (54%), Gaps = 10/418 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG + +I DNG Sbjct: 1 MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGGANLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIPKEELSLALARHATSKITDLDDLEAILSLGFRGEALASISSVSRLTLTSRTEEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + +P + GT VEV +LFF PAR FL++++ E + I +VIRR+A+ Sbjct: 121 WQVYAQGRDMETTIKPASHPVGTTVEVANLFFNTPARRKFLRTDKTEFSHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +FT + + +R++ + G+DF+ NA+ ++ K +++ L G+ Sbjct: 181 TKFNTAFTLTHNGKIIRQYRPAEELTQQLKRVAAICGDDFVKNALRIDWKHDDLHLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VDV Sbjct: 241 ATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAKYLPTDVYPAFVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK----GISTSSVLSKKMISSFHQDNAPKT 353 NVHP K +RF +I +FI + + A+N + + S + ++ + + Sbjct: 301 NVHPTKHEVRFHQQRLIHDFIYEGVSHALNNQEQLNWHTDQSAVENHEENTVREPQPNYS 360 Query: 354 HLPKYATSLTNTQEKLF---LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 P A + N+ + Q+N+ ++ + + D ++ + Q Sbjct: 361 IRPNRAAAGQNSFAPQYHEKPQQNQPHFSNTPVLPNHVSTGYRDYRSDAPSKTEQRLY 418 >gi|294139254|ref|YP_003555232.1| DNA mismatch repair protein MutL [Shewanella violacea DSS12] gi|293325723|dbj|BAJ00454.1| DNA mismatch repair protein MutL [Shewanella violacea DSS12] Length = 619 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 165/584 (28%), Positives = 266/584 (45%), Gaps = 49/584 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ IKEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MTIQILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIKIHDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSK+S DD I +FGFRGEAL SI +VS LTL SR + + Sbjct: 61 SGIPKEELSLALSRHATSKLSSLDDLDAILSFGFRGEALASISSVSRLTLTSRTAEQSEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ P A G+ VE DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAYAEGSDMAVKVIPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT T+ + +R++QV G+ F A+ + + + L GY Sbjct: 181 VSRDIHFTLKNNGKVVRNFRPAKTSDQYLQRLAQVSGKKFALQALAVECEHEGLKLSGYI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F ++ Y ++NGR V+D+ + +R A+AE + G VL+LE+DP QVDV Sbjct: 241 QSPYFEGSASDTQYFYVNGRLVRDRLVNHAVRQAFAEHV-TGAQASYVLMLELDPHQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-KMISSFHQDNAPKTHLP 356 NVHPAK +RF + ++I Q++Q A+++ G + +S + A P Sbjct: 300 NVHPAKHEVRFHQSRYVHDYIFQALQSALSQVGKPVFLAEDQSNKEASSNSYQASVLESP 359 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES----------------- 399 + S +T F +E S S + Sbjct: 360 RVNESDASTGYLPFNKEPDTSQARAKHEHSIASSAYYPGSKSGLSPSSAARPQVELPSVA 419 Query: 400 ---------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH------ERLIFEKMR 444 + Q+ + DG V A E + + ++ Sbjct: 420 AIASYGALLTTPVVPPQVGNGQVRDPQDMPPVLDGKYWVLTQADSLTLLTIENVASKLLQ 479 Query: 445 QDFNST---KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE-RFGPNAIAIREI 500 + + SQ LL P I + + I + L ++GI+ R G + I+++ Sbjct: 480 VSILAKLECGLVSQPLLMPVSIPMDDDWQVTIEHRELMLRKMGIELTIRLGQ--LIIKKV 537 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 P L + + ++ +++ + +E + + +A +G Sbjct: 538 PPYLRQSQLVSVIPELLQWMRFEEPG------LEALASWVAKHG 575 >gi|94264331|ref|ZP_01288123.1| DNA mismatch repair protein:ATP-binding region, ATPase-like [delta proteobacterium MLMS-1] gi|93455225|gb|EAT05438.1| DNA mismatch repair protein:ATP-binding region, ATPase-like [delta proteobacterium MLMS-1] Length = 670 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 169/677 (24%), Positives = 293/677 (43%), Gaps = 95/677 (14%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L E + NQIAAGE++ERP+ +KEL+EN++DA + V +AG ++ Sbjct: 4 IRILPENLANQIAAGEVVERPASVVKELLENAVDAGAGNVTVQVAGNATGLIRV------ 57 Query: 63 M------TSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ 114 + +++ ++++RH TSK+SD I T GFRGEA+ SI +VS L L SRP Sbjct: 58 IDDGHGMDGDDLLLSLERHATSKLSDQASLHAIRTLGFRGEAMGSIASVSRLRLTSRPTG 117 Query: 115 NNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRR 174 GA + ++ + V GT VEVRDLF +PAR FLKS + E + + IR Sbjct: 118 AELGAMVEVAYGTVRKVSEAGAPVGTTVEVRDLFGNVPARRKFLKSARTELYHVEECIRN 177 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGE------------------- 215 A+A+P + + + ++ + R++++ Sbjct: 178 CALAFPYLGVDYQVNGRSAWQWPA--GVDDLAGRLARLFPRGEVGELLRVAGGELAEQLL 235 Query: 216 ------DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIR 269 + + + + + ++ + G +P + + +NGR V+D+ + + Sbjct: 236 AAGRPLELLAHHLAVGDQPPAPVVAGLLPLPEAMLATGGKLRMLVNGRPVRDRLLGQAVG 295 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 A + GR P L + IDP VDVNVHP K IRFR ++ + +++ A+ Sbjct: 296 EALRNELARGRRPAGALFIGIDPTLVDVNVHPTKQEIRFRAQAGVQEAVRRAVTAALKTH 355 Query: 330 GISTSSVLSKK--------------------------------------MISSFHQDNAP 351 + +D P Sbjct: 356 ERQRRDAFFGQPAAAQAAATSRRPPAAEQAPRQEKVTDSGLVTGPSATTAADDPGKDRRP 415 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA-- 409 T E + E R T ++ PT + + E + Sbjct: 416 PPTQAAGEADAQPTGEATVVGEQRRPTPVAEFAESPTVTSPAPSLAEKGERWSEEAACPT 475 Query: 410 -----------CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 Q+ ++YI ++ L+ VDQHAAHERL+FEK+R+ + + Q LL Sbjct: 476 PAMVDESRPRLVGQVLKSYIFCESGGALLAVDQHAAHERLLFEKLRRQYQQQGLARQGLL 535 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P +++L E ++ E++ RLG++ FG + ++ +PA+L+ +++ ++ Sbjct: 536 FPAVLELGPAEATVLERRAEEISRLGLEVAAFGGYSYLVKAVPALLAGAAPAEIVAGVLA 595 Query: 519 -EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 + + +E +LA MAC +I++G++++ EM LL EM++ S+C HGR Sbjct: 596 PWLAEGGRAGAAT--LEAVLAQMACKAAIKAGQRLEPAEMEGLLAEMQQAGLFSRCPHGR 653 Query: 578 PTFIKLKLSDIEKLFGR 594 P + ++EK F R Sbjct: 654 PVVRRFAPGELEKWFHR 670 >gi|294102016|ref|YP_003553874.1| DNA mismatch repair protein domain protein [Aminobacterium colombiense DSM 12261] gi|293616996|gb|ADE57150.1| DNA mismatch repair protein domain protein [Aminobacterium colombiense DSM 12261] Length = 573 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 168/598 (28%), Positives = 270/598 (45%), Gaps = 31/598 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I KL ++ +IAAGE++ERP +KE +ENSLDA SSR+ + GGKS + DNG Sbjct: 1 MAILKLPREVALKIAAGEVVERPVSVVKEALENSLDAHSSRILVTLTEGGKSSIVVEDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+P+ + R+ TSKI+ +D SNI T G+RGEA+ SI AVS + L S+ G Sbjct: 61 NGILWQEMPLVITRYATSKIATVNDLSNIKTLGYRGEAIASIAAVSRIDLRSKAKGAAEG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + G I + GT ++V DLFF PAR FL+S E I+ ++R A Sbjct: 121 GLLKAEGGSIVCHEQLPWKEGTRLQVDDLFFNFPARKKFLRSNLSELRKISALMRDFGAA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 YP V F+ + ++ G+ + + G + ++ S ++ + Sbjct: 181 YPAVLFSLYHNGNKIFETQ---GTGDRAAVLRSLWGASPETRSTTVSCGSIKLECW-WQS 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P N F+NGR V D I A + G + + P VDVN Sbjct: 237 TP---GRQKNIITSFVNGRIVSDPLIRGAASAACKDF--SGNWMFF---FTLPPELVDVN 288 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-KMISSFHQDNAPKTHLPK 357 +HPAK+ +RFR P I + + N+ + + K + F + + LP+ Sbjct: 289 IHPAKAEVRFRYPAEIFEAVKAASLDLQNRPTRLSFPSFWEGKELKEFVAPHLHRQALPQ 348 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 + LF +R+S+ +LL + E+ AQ+ Y Sbjct: 349 REEG-----QDLF---SRVSSPELLEEVKIESWGEKSVFSPDESKI----FFIAQMAAGY 396 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 ++ + L+I+D HAAHER+ +EK+ S + SQ L P + + + + E+ Sbjct: 397 LLFEKNGQLIIMDPHAAHERIEYEKVLSRMKSEQFPSQKLNPPLL--IPPTLASEVEEYG 454 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAI-LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 +L + G E + + PA+ + + P L + + + + D I Sbjct: 455 VELEKAGFIFEIEEGQS-MLSASPALPIEGREGPLFLLRTAILTWNETGSRAMDDVIWKK 513 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AT+AC +++ + E L ++ N S C HGRPT + L +IE+ FGR Sbjct: 514 WATIACKRAVKLTTHCNAAEALHLYAALQFCENPSVCPHGRPTTLVLDKYEIEQFFGR 571 >gi|268611652|ref|ZP_06145379.1| DNA mismatch repair protein MutL [Ruminococcus flavefaciens FD-1] Length = 677 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 148/677 (21%), Positives = 282/677 (41%), Gaps = 87/677 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I LS++I IAAGE+IERPS IKEL+ENS+D+ + + I GG ++ ++TD+G Sbjct: 3 PINILSKEISELIAAGEVIERPSSVIKELVENSIDSGARHITVEIKNGGTTYMRVTDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ ++P A RH TSKI+ +D NI T GFRGEAL S+ AV+ + ++++ ++ G Sbjct: 63 GMSFGDVPKAFLRHATSKITAKEDLDNILTLGFRGEALASVAAVARVEVLTKQREDALGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 AI G + + GT + +RDLF+ +PAR F+K + E N ++++++++ +++ Sbjct: 123 LYAIEGSEEKAHEESGCPDGTTIIIRDLFYNVPARQKFMKKDVTEANAVSNILQKITMSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F + S +G + V G DF + +E++ + I + GY Sbjct: 183 PDVAFKLIRDNRVEFN---SSGDGELFSAVYAVYGRDFARDLMEVDYEYEGIHVGGYVIK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +++ N F+NGR V+ K S + AY + G++P VL++++ P +DVN+ Sbjct: 240 PLYSKNNRAFQNFFVNGRYVRSKLCSSALENAYTNMMMTGKFPACVLMIDLPPVAMDVNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI----SSFHQDNAPKTHL 355 HP K+ +RF N + + + +++ A+ K G+ L + + + + Sbjct: 300 HPTKAEVRFTNERNVSDAVYFAVKNAMMKDGLIYEFELKPRTDWTKKEPEPVEMKQQEFM 359 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 + + T+ ++ ++ + D P + D + E + + Sbjct: 360 FTPVSQIAETERRMAEEKPAVQPVQEKEEDIPLETADIEVCPEYSKPEPVAAPVQTEQAR 419 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 + S + + V Q A E + I + + + E Sbjct: 420 PVVQSAPAEPVRPVVQSAPEPVKEPEPPVEKPEPAPIEGFSYINTSSFAGAPVKQETAPE 479 Query: 476 HDEDL-----------HRLGI-KAERFGPNAIA--------------------------- 496 ++ + G+ G N + Sbjct: 480 PEQSVWTEKPKIRVIGEAFGLYVIAEVGDNTVIMIDKHAAHERIIFERLKSRNCRQYSQK 539 Query: 497 -IREIPAILSKKNIPQLLR--DIIDEI---IDSSTTYT--------------LQDRIENI 536 + I +++ + L +++ ++ D S + ++D I I Sbjct: 540 LLTGIKVLMTGDEVSALQENTELLADLGFEFDFSESPCVIATAVPTFVMELDVEDIISEI 599 Query: 537 LA-------------------TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 + T+AC +I++ K E+ L ++ + C HGR Sbjct: 600 ASNLRMYAHNPQSHMLDDMLHTVACKSAIKANDKNDMAELQSLAEQVYYDERIRHCPHGR 659 Query: 578 PTFIKLKLSDIEKLFGR 594 P + ++I F R Sbjct: 660 PVMFTMTKNNIAHQFKR 676 >gi|323496870|ref|ZP_08101902.1| DNA mismatch repair protein [Vibrio sinaloensis DSM 21326] gi|323318056|gb|EGA71035.1| DNA mismatch repair protein [Vibrio sinaloensis DSM 21326] Length = 652 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 152/562 (27%), Positives = 257/562 (45%), Gaps = 62/562 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +V+ LT+ SRP + Sbjct: 61 KGIAKDELGLALSRHATSKIHTLDDLEAIISLGFRGEALASISSVARLTMTSRPATQDQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++I+R+A+ Sbjct: 121 WSAYTEGRDMEVKLQPTAHPMGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELIKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + T+ +RI+ V G F+ + +++ + + L G+ Sbjct: 181 SRFDVTINLRHNGKMIKQYRAAKTDIQAEKRIAAVCGSAFVRHMLKIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +EIDP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRPEQFATYVLFIEIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-------- 349 NVHPAK +RF ++ +FI Q++ A+ + L+ ++ Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSDALAQSAHIDKPELTASAFHQPQPESPASAPESK 360 Query: 350 -------------------------------------APKTHLPKYATSLTNTQ------ 366 +P++ + +L+ T+ Sbjct: 361 QALTSQVPDQVYQAVENTPSYPGKADYEEHRSAVREASPRSDWHESRPALSKTKSTERYS 420 Query: 367 EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGL 426 E ++ + +LL + D + V + +T+ + + I + L Sbjct: 421 EPAPSKQEVRAYQELLQTPDVSEPSRVAIVPPTSSTNAPASLPSVETLGKAICVVEGNCL 480 Query: 427 VIVDQH-------AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ D+ A E L K + K SQ LL P + L + + Sbjct: 481 LMADKTGARLVNLAKAEWLRI-KGQLSIEQGKRKSQPLLVPLSLKLEPELLIAAEKIESI 539 Query: 480 LHRLGIKAERFGPNAIAIREIP 501 L+ LGI+ ++ G A+ + +P Sbjct: 540 LNALGIELKKRGQQALLVMGVP 561 >gi|323960318|gb|EGB55958.1| DNA mismatch repair protein MutL [Escherichia coli H489] Length = 475 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 133/408 (32%), Positives = 210/408 (51%), Gaps = 5/408 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHPAK +RF ++ +FI Q + + + + T L + + + Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQ-QLETPLPLDDEPQPAPRSIPENRVAAG 359 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 + + +E + + + P+ ++ ++ E Sbjct: 360 RNHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQ 407 >gi|197334775|ref|YP_002157121.1| DNA mismatch repair protein MutL [Vibrio fischeri MJ11] gi|238690271|sp|B5FBR6|MUTL_VIBFM RecName: Full=DNA mismatch repair protein mutL gi|197316265|gb|ACH65712.1| DNA mismatch repair protein MutL [Vibrio fischeri MJ11] Length = 661 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 130/473 (27%), Positives = 230/473 (48%), Gaps = 14/473 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENS+DA ++R++ I GG +I DNG Sbjct: 1 MPIQILPARLANQIAAGEVVERPASVVKELVENSIDAGATRIDIDIEKGGSKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIPKDELTLALSRHATSKITSLDDLEAIVSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G +++ +P A GT ++V DLFF PAR FL++++ E I ++++R+A+ Sbjct: 121 WSAYAEGREMNVKLKPAAHPIGTTIDVVDLFFNTPARRKFLRADKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + T +R++ V G +F+ +A+E+ + E+ G+ Sbjct: 181 SRLDVTINLRHNGKMVRQYRAAQTKPQIEKRLAAVCGANFLQHALEVELEHGELKFHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R + Y ++NGR ++DK I IR Y ++P +Y +L +EI+P VDV Sbjct: 241 SSPEGARAQGDIQYCYVNGRMMKDKLINHAIRQGYESSLPANQYAAYILFIEINPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q+I A+ + ++ V + + + +++ P Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAIFGALQQGASLSNVVCNDQPLVEEQVIENKESYFPP 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 + Q+ + + +L P + + + +S + + Sbjct: 361 MKEYVRQPQQSHYPKSEQLRVAVESTPSYPNKAPLDSWIPKSSTG-----------NSSS 409 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 S D+ A + ++ + + S + + + + + Sbjct: 410 KPSALPRSFHNNDKPAEKALSNYNELLTTQSRVQRESSSQVNEQSLTFSTTQQ 462 >gi|240948078|ref|ZP_04752488.1| DNA mismatch repair protein [Actinobacillus minor NM305] gi|240297558|gb|EER48050.1| DNA mismatch repair protein [Actinobacillus minor NM305] Length = 646 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 154/567 (27%), Positives = 269/567 (47%), Gaps = 67/567 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++++ I GG +I DNG G Sbjct: 6 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANQIHIEIEKGGAQLIKIRDNGCG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A+ RH TSKI+ +D I + GFRGEAL SI +VS LTL SRP Q Sbjct: 66 IAKQDLALALARHATSKIATLEDLECILSLGFRGEALASISSVSRLTLTSRPEGQTEAWQ 125 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G +++ ++P + GT V V +LFF PAR FL++++ E I +VIRR+A+A Sbjct: 126 AYAQGREMTVEIQPASHPVGTTVSVANLFFNTPARRKFLRTDKTEFQHIDEVIRRIALAK 185 Query: 180 PKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P V+F S + ++ +R++ + G+ FI A ++ + ++ L G+ Sbjct: 186 PHVTFILSHNGKVVRQYRKVLDNSVEQQQKRVAAICGDAFIQQATHIDWQHGDLHLHGWV 245 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+PT R + Y ++NGR ++DK I IR AY ++I G YP V+ L++DP VDV Sbjct: 246 GMPTLARTQNDLCYSYVNGRMMRDKTINHAIRQAYGDSIAQGDYPAFVIFLDLDPSHVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG-----ISTSSVLSKKMISSFHQDNA-- 350 NVHPAK +RF ++ +FI+Q + + + ++ + + + + + + QD Sbjct: 306 NVHPAKHEVRFHQGRLVHDFILQGVHQTLQQQAPLALMLESHTDEIHEAVPVYSQDTNRA 365 Query: 351 -----------------------------PKTHLPKYATSLTNT------------QEKL 369 +H+P ++S + +E Sbjct: 366 AAGENIFAGQMASSTKYHGHSGGNGGRTTFSSHIPTKSSSPSAQRWYNELITTEKCEEDD 425 Query: 370 FLQENRLSTNDLLPSDDPTYSEDN-----DPVEESEATHYQLGIACAQIHQNYIISQTTD 424 F Q + D +P + E+ + + A + Q + + + Sbjct: 426 FHQPVAIFYQDTAKQSEPERLSTHVERALPLNSETLSVPHSHATVLAIVQQQAALLKEHE 485 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 ++ + E+++ SQ+LL P + L E + A+ + ++L + G Sbjct: 486 SFFLLPLTKLGQWHWLERLK------SGESQSLLIPLTLTLEEEQNAVWSQLKDELAKWG 539 Query: 485 IKAER---FGPNAIAIREIPAILSKKN 508 + G +++ +P L ++N Sbjct: 540 FQISEKNWQGKVRLSMSAVPKGLREQN 566 >gi|325971464|ref|YP_004247655.1| DNA mismatch repair protein mutL [Spirochaeta sp. Buddy] gi|324026702|gb|ADY13461.1| DNA mismatch repair protein mutL [Spirochaeta sp. Buddy] Length = 588 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 160/602 (26%), Positives = 274/602 (45%), Gaps = 23/602 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI+ L + +IAAGE+IERP+ I+EL++N+LDA S + + GG ++ D+G Sbjct: 1 MKIKLLDPLVAQRIAAGEVIERPASVIRELLDNALDAGSKSIVASVIEGGLEEIKVIDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++P+ + H TSK+ DD +I + GFRGEAL SI +VS +T+ S Sbjct: 61 EGIEREDLPLLCESHATSKVRELDDLYHIKSMGFRGEALYSIASVSRITIASSFQGQEP- 119 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 QI + + +V P GT+V V LF +PAR FLK E + V+ A+A Sbjct: 120 YQITVDNGRKEAVLPGGPRTGTMVTVEGLFKELPARRQFLKRPSTEATMARAVLLEKALA 179 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P +F F + ++ R + + + + + + +EL + + L Sbjct: 180 FPDRAFRFISDQTVRVDLVPTTRKQRVLDVLL-LNQNIVSSEMLELYDSAGRFDLYAVCS 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P F+R + + +++N R V + ++ + Y E + G +P L +++DP VD N Sbjct: 239 SPAFSRSDRSHIKIYVNNRPVDEYSLVQAVTYGYGELLAGGSFPYCYLFIDVDPTLVDFN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 +HP K ++ RN I + ++ I I + + S Sbjct: 299 IHPTKREVKLRNKAEIHHQVVSMIASQIKRTIPRLVKQELEAEASPLLAPLYETKPSSYQ 358 Query: 359 ATSLTNTQEKLFLQENRLSTN-----DLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQ 412 A+ +N E + S +LL + S + + +E Q I Q Sbjct: 359 ASERSNRYEAPSQKAPLDSEWFQKARELLEGNRMQASRTTESQDIWAEQEDEQEFIYLGQ 418 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 ++++Q D L +VDQHAAHERLIF+++R+ N ++ + P ++ Sbjct: 419 AFNLFLVAQKKDDLFLVDQHAAHERLIFDEVREKKNIQQL-----MIPLSFEVERDVDTY 473 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 ++EH + LGIK ER I +P + NI L I TT Q+ Sbjct: 474 LLEHQDVYLNLGIKLERTEDLLWQISSLPGLYR--NIEAQLVSFIQ-----KTTGDTQEV 526 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 + + A +AC+ +I++G + + LL ++ + C HGR ++L ++ K Sbjct: 527 EKGLYAVVACHAAIKAGDTVDRMMALSLLTKVFQLDEP-TCPHGRTFVVRLNKEELMKAV 585 Query: 593 GR 594 R Sbjct: 586 QR 587 >gi|254425033|ref|ZP_05038751.1| DNA mismatch repair protein MutL [Synechococcus sp. PCC 7335] gi|196192522|gb|EDX87486.1| DNA mismatch repair protein MutL [Synechococcus sp. PCC 7335] Length = 570 Score = 379 bits (972), Expect = e-102, Method: Composition-based stats. Identities = 158/600 (26%), Positives = 266/600 (44%), Gaps = 54/600 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L+++++ +AAGE+I+ S ++EL+EN+LDA ++R+ + + ++ DNG Sbjct: 8 QIQSLAQEVVYLMAAGEVIDSLSAVVRELVENALDAGATRITISVW-PSRWQVRVADNGC 66 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ-NNTG 118 GM + A H TSKIS D + GFRGEAL SI +S L + SR +G Sbjct: 67 GMDLANLSRAAIAHATSKISTYPDLFTTQSLGFRGEALHSIAQLSQLEICSRSHGPEASG 126 Query: 119 AQIAISGEKISSVRPVAMNP-GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ + A GT+V VR LF PAR + + + + +I + + Sbjct: 127 YQVNYDNSGLPDEISDAAIAPGTVVTVRHLFENWPARRQ-MPTADSQLKAVVALIHQFML 185 Query: 178 AYPKVSFTFSTIKSNRYKMNF-QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 +P+V + + + + ++ P+ + V D + L Sbjct: 186 CHPQVIWQLEKDGTPWFSLWPSRTAKSIIPQLLRNVYDTDI--------NEYQADGLYLA 237 Query: 237 TGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 G+P +R + V INGR+V ++ T+ + TIP RYP+ L L + P Q+ Sbjct: 238 IGLPDRCHRRRPDWVRVAINGRSVAVDELMQTLIAGFRRTIPRDRYPICFLHLTLPPAQL 297 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 D N HPAKS I + + + + +++K + +S S+ + L Sbjct: 298 DWNRHPAKSEIYVQGLSKLCEQVTGALEKLLRIDDLSESAQTYRGAA------------L 345 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 K A + +Q + T L+ + +D + S IA AQ+ Sbjct: 346 IKAAEAEGEYAVSRQIQSDSSDTEGLVANQHVPPQSLSDTLPGSLPGD---LIAIAQVKD 402 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 YI+++ G+ +++QH AHER++FE+++Q + + S +L+ L Sbjct: 403 TYILAEHAGGVCLIEQHIAHERVLFEQLQQRWQLVPLASPIVLS-----------DLSER 451 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAIL-SKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 E L LGI FG N AIR IP L + + + L ++ +L +E Sbjct: 452 QVEQLDELGIVIAPFGENLWAIRTIPEPLYDRGDRTEALIEL-----------SLGANLE 500 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L AC +IR+G + EM LL + ++ C HGRP + LK S + K F R Sbjct: 501 AALVATACRTAIRNGTSLTIAEMQTLLNQWQRTQKPRTCPHGRPICLTLKESSLAKYFRR 560 >gi|157963356|ref|YP_001503390.1| DNA mismatch repair protein [Shewanella pealeana ATCC 700345] gi|189030414|sp|A8H8G8|MUTL_SHEPA RecName: Full=DNA mismatch repair protein mutL gi|157848356|gb|ABV88855.1| DNA mismatch repair protein MutL [Shewanella pealeana ATCC 700345] Length = 628 Score = 378 bits (971), Expect = e-102, Method: Composition-based stats. Identities = 164/590 (27%), Positives = 272/590 (46%), Gaps = 54/590 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I KL ++ NQIAAGE++ERP+ IKEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MAIEKLPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A+ RH TSK+ DD I +FGFRGEAL SI +VS L L SR + Sbjct: 61 SGIPKEDLSLALSRHATSKLKSLDDLEAILSFGFRGEALASISSVSRLILTSRTAEQTEA 120 Query: 119 AQIAISGEKISSVR-PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G +++ P A G+ VE DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAHAEGTEMAVKVLPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A + FT +T + +R+ Q+ G+ F + + + N++ L GY Sbjct: 181 ARRDIHFTLKHNGKTVRNYRPANTEIQYIQRLGQICGKAFAETCLRIECEHNDLKLSGYL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P+ G + Y ++NGR V+D+ + +R A+++ G P VL+LE+DP QVDV Sbjct: 241 QSPSAASGYSETQYFYVNGRLVKDRLVNHAVRQAFSQY-AEGISPGYVLMLELDPHQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------------KGISTSSVLSKKMI 342 NVHPAK +RF + ++I+Q++Q A+ + TS Sbjct: 300 NVHPAKHEVRFHQSRYVHDYILQALQSAMAQSTQLSVDIEPESEQTTAWQTSPTRGAVAP 359 Query: 343 SSFHQDNAPKTHL------------------------PKYATSLTNTQEKLFLQENRLST 378 S + ++ K + + N++ L Q + + Sbjct: 360 SHYVDESKSKPSAVFDVRERHSSASQAGYSGGGGSYRSQLKPASRNSEVSLPSQTSIRAY 419 Query: 379 NDLLPSDDPTYSEDNDPVEESEATHYQLGIACA------QIHQNYIISQTTDGLVIVDQH 432 +LL +D N P+ + + + I Y + D + ++D Sbjct: 420 GELLSTDSVQTQSTNVPLRPAAHQAGMMSTSHGAASMPPVIAGQYWVLVKEDKISLLDI- 478 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE-RFG 491 A + + + I Q LL P I + + +I ++ L +LGI+ R G Sbjct: 479 AMVAKAALKAEIAAKLAQGIIGQPLLMPVAISVDDDWPEIIDNREQLLRKLGIELSIRLG 538 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEI-IDSSTTYTLQDRIENILATM 540 + I+++P L + L+ ++++ I ++ + + + A Sbjct: 539 Q--LIIKKVPPYLRDSQLAALIPELLEWIRLELPSDAAVIKWLAEQAANR 586 >gi|315186032|gb|EFU19795.1| DNA mismatch repair protein MutL [Spirochaeta thermophila DSM 6578] Length = 573 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 150/596 (25%), Positives = 269/596 (45%), Gaps = 38/596 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E + +IAAGE+I+RP+ ++EL++N+LDA S+ + I+ GG + D+G Sbjct: 11 RIKLLEEAVFRKIAAGEVIDRPAAVVRELLDNALDAASTEITVEISQGGIERILVLDDGE 70 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E++ H TSKI D + T GFRGEAL SI AV+ + SR +G Sbjct: 71 GMVPEDVRRCYLPHATSKIRSEQDLLAVTTLGFRGEALGSIAAVATTRIASRARGTPSGY 130 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + ++ + GT VEV LF + PAR FLK+ E L ++ A+ + Sbjct: 131 FVLVDRGRLVEEGETHLPEGTRVEVERLFSSFPARKRFLKNPSTEGLLCRRMVVEKALPF 190 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE-KSNEITLQGYTG 238 P V+F F + + + R+ + E F +A E E + +E+ ++G Sbjct: 191 PHVAFRFVRDGQMEFYLPP----QDLLARVCAALPELFKPSASERFEVEQDEVRIEGVLL 246 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P F + + +++N R VQ+ + + Y +P G+YP V+ L + P +VD N Sbjct: 247 SPAFPQRDRRHIRIYLNRRLVQEFSLAQAVAYGYRGVLPGGQYPAAVVFLTLPPERVDFN 306 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK + R + + + +++++A+ + AP T P+ Sbjct: 307 VHPAKREAKIRGLSSLHALLARAVEQALKDWIGV--------------RRIAPTTGRPE- 351 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 T + + +R T +L T++ +D + Q ++ Sbjct: 352 TVGETERVYRPHPEPSRSGTGELFTGPSHTFTLPSDSGHPPSPRTGEGFTYLGQAFGVFL 411 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + + L++VDQHAAHER+++ ++ +S ++ L P + E A + + E Sbjct: 412 VVEREGTLLLVDQHAAHERILYNRLTSHPSSQEL-----LFPYAFPVDADEAARLEDARE 466 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 ++ LGI+ + +PA L + P ++ + L D + A Sbjct: 467 EIEALGIRF-VLEEGRCTLTHLPAPL--SDAPHVVAQWL-------KGERLADPERDAYA 516 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T+AC G+I+ G + + LL + C HGRP ++++ ++ + R Sbjct: 517 TLACRGAIKEGEVVDRLTALDLLSQTFSLEEPF-CPHGRPLWVEITREELFRRIRR 571 >gi|302338864|ref|YP_003804070.1| DNA mismatch repair protein MutL [Spirochaeta smaragdinae DSM 11293] gi|301636049|gb|ADK81476.1| DNA mismatch repair protein MutL [Spirochaeta smaragdinae DSM 11293] Length = 613 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 142/618 (22%), Positives = 263/618 (42%), Gaps = 42/618 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L +++ +IAAGE+I+RP ++EL++N++DA + ++ +AGGG ++ DNG Sbjct: 11 SIHLLRDQVARKIAAGEVIDRPFSLLRELMDNAVDAGADTIDVHLAGGGTRSVRVVDNGC 70 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E++ + H TSKIS +D I + GFRGEAL SI A S L + S + Sbjct: 71 GMEREDLELCFLPHATSKISEVEDLDRITSLGFRGEALSSIAACSRLRITSAVAEGE-AF 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + K+ S++P GT+VE DLF++IPAR FLKS+Q E + + A+A+ Sbjct: 130 TIEVDNGKLLSLQPSKGRKGTVVEASDLFYSIPARKRFLKSDQAELSACRKLFAEKALAF 189 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE-KSNEITLQGYTG 238 P++SF + + + + +R++ + + + Sbjct: 190 PEISFRLFSEGELKLFLPA----SSLIDRVTASYPGQVHASMIHTIQGAGEGFHFTALGS 245 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + R + ++++N R + + ++ + Y E +P G +PV L LE+DP +VD N Sbjct: 246 GLSLYRKDRRYIHIYVNKRKIDEFSLVQAVSYGYGEYLPGGTFPVCFLFLEVDPERVDFN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH------------ 346 +HPAK +RFR I + + I+ + K + H Sbjct: 306 IHPAKKEVRFRGLKEIHHQVSSGIRDFLRSKWPTPLPYEIPAADDRPHLSEGEKNDFGSS 365 Query: 347 ---------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 + + P+ S + + + D + + Sbjct: 366 GFPKPSYDKAPFSKSSMSPRSKNSFSFPPSSTVAPVKSNAEQNRQFYDRFEQTRSQQEQQ 425 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 +E + Q+ ++ ++ ++DQHAAHER+++E+ + + L Sbjct: 426 AAEESQAYAFRYLGQVFGLFLAAEKEGTFYLIDQHAAHERILYEQFVAGASRKQ----QL 481 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN-AIAIREIPAILSKKNIPQLLRDI 516 L P+ + L + L+ + LGI E + + +P ++ + + Sbjct: 482 LIPKRLQLDDEGKTLLQGQIDYYRGLGIVIEAEKEGDNLLLTALPESC--VHLEKEITTF 539 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 I+ S ++ E I A +AC +I+ G + +++ +C HG Sbjct: 540 IESQETGSDGFS-----ERIFANLACKAAIKEGEFLPPETAKKIIAGTFALKQ-HRCPHG 593 Query: 577 RPTFIKLKLSDIEKLFGR 594 RP + + ++ K GR Sbjct: 594 RPLYFSVTEKELYKAVGR 611 >gi|282899144|ref|ZP_06307125.1| DNA mismatch repair protein [Cylindrospermopsis raciborskii CS-505] gi|281196060|gb|EFA70976.1| DNA mismatch repair protein [Cylindrospermopsis raciborskii CS-505] Length = 550 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 149/597 (24%), Positives = 272/597 (45%), Gaps = 63/597 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++ I AGE+I+ S ++EL+ENSLDA ++R+ + K ++TDNG G Sbjct: 2 IQSLPTEVVYLITAGEVIDSLSAVVRELVENSLDAGATRIVISLY-PEKWRVRVTDNGLG 60 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ E++ A H TSKI D I T GFRG+AL S+ + L + SR G + Sbjct: 61 MSLEDLEQAAIAHSTSKIHHAADLWKIKTLGFRGQALHSLTTLGELEIFSRCAGEKQGWR 120 Query: 121 IAISGEKISSVRPVAMNP-GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + + V GT+V V +LF R L ++ + + I+++A+ + Sbjct: 121 VVYNKNGNVTKTEVVAIAPGTVVTVDNLFGNYAERRQGLPNKNQQLKKVQATIQQIALCH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNF-PERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P+V++ K+ + + P+ ++QV D + + E + I L G Sbjct: 181 PQVTYQVWQDKTEWFTIYPAPAVERIIPQILNQVKPGDLKGINLTIPELDSTINL--VVG 238 Query: 239 IP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P +R + + INGR V+ + + A+ +T+P RYPV + L I P Q++ Sbjct: 239 LPDRCHRHKPDWVKIAINGRIVKSPELEEAVFGAFYKTLPRDRYPVCFVHLTIQPDQINW 298 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 N +PAK+ I T + + +SI +A Sbjct: 299 NRNPAKNEIYLNKMTYWQQKVTESIDQAF------------------------------- 327 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 S+ ++ K +Q R++ L Y+ + +EE++ ++ Q Y Sbjct: 328 ---SIASSTIKESVQTGRITNLFKLAETKGDYNFSHSNLEENKGSNLIDLKVIGQASNTY 384 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 I+++ ++G+ +++QH AHER+I+E++ + + S +L L E Sbjct: 385 IVAEYSEGMWLIEQHIAHERVIYERLCDQWQIVPVESPIVL-----------YQLSTEQV 433 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 + L ++ + E FG N A+R +P +L + D + +++ S L+ + Sbjct: 434 KQLEKINLDIECFGENLWAVRSVPEMLKNRE------DCREALLELSMGGNLEAAKVAV- 486 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC +IR+G M +EM +L+ + ++ N C HGRP + L+ S + + F R Sbjct: 487 ---ACRTAIRNGTPMTLVEMEQLIYDWQRTRNPRTCPHGRPICLTLEESALARFFRR 540 >gi|325479567|gb|EGC82663.1| DNA mismatch repair protein, C-terminal domain protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 616 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 177/625 (28%), Positives = 292/625 (46%), Gaps = 40/625 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I KL K I +IAAGE+IE P +KEL+ENS+D+++ + I GGK++ ++TDNG Sbjct: 1 MTIVKLDTKTIEKIAAGEVIESPMSIVKELVENSIDSKADSITVEIKNGGKTYIRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ +A +H TSKI D D +I++ GFRGEAL SI VS +T ++R + + G Sbjct: 61 CGIEREDLDLAFSKHATSKIKDFNDLFDIYSLGFRGEALSSIATVSKVTAITRTNEEDIG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++I I IS + +A N GT + D+F IP R FL+S+ +E N I ++ AI Sbjct: 121 SKIVIDNG-ISKISSIATNIGTSIIAEDIFRDIPVRHKFLRSDAIEANKINRLMYAFAIG 179 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 Y +SF + + + N +F ++S ++ + +N +E+ ++E L+GY Sbjct: 180 YNNISFKYIKNDNVLFTTNKSY---DFKNKVSDLLDDSLGDNLLEIKGSNDEYKLKGYIS 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + RGN + Y+FIN R ++ I+ T+ AY IP R+P + + D + +DVN Sbjct: 237 NSNYYRGNRSLQYLFINNRLIESDIIVRTVEHAYKNNIPSNRFPAFFMFVTTDAKNLDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI---------------- 342 +HP K I F + N I I KA++ + Sbjct: 297 IHPNKKTINFNYEESLLNLIENIILKALSNNYKPNEIKFVEDKDDELMDFSDYSKLLNEY 356 Query: 343 ---SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 + F ++N +T + + +Q L + ++L D +Y N ES Sbjct: 357 NNTNKFVKENDDETKYESQSQNNEQSQSNLVDDDFFDLEANILNEDKHSYINTNHKNTES 416 Query: 400 EA----------THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + A Y + + + L I++ A E++ K DF Sbjct: 417 KQIPTLPKNSFIDEIDHIEYKASFLGRYSLFERDNTLYILNHRRASEKINITKFMDDFKR 476 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 + SQ L+ +II+L++ + + E + +LG AE G ++I IR +P I Sbjct: 477 ESVASQILMDAKIINLMQNDVVKFKQKQEYIKKLGFDAEIIGESSIIIRSVPVIFEIPEN 536 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 D++D D T Y + ++ L + R G K+ E L+E+ N Sbjct: 537 EDFFYDLLDIDYDMGTDYIYKKIKKSKLNLL-----FRKGNKIGEKEATAYLKELFSMEN 591 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 + G+PT IK+ D+EK F R Sbjct: 592 PYKTLDGKPTIIKVSEEDLEKYFER 616 >gi|170077272|ref|YP_001733910.1| DNA mismatch repair protein [Synechococcus sp. PCC 7002] gi|169884941|gb|ACA98654.1| DNA mismatch repair protein [Synechococcus sp. PCC 7002] Length = 565 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 140/604 (23%), Positives = 264/604 (43%), Gaps = 67/604 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L +I IAAGE+I+ + ++EL EN++DA ++R+ I + ++ DNG G Sbjct: 4 IKQLPNDVIQLIAAGEVIDSLAAVVRELAENAIDAGATRINIDI-QPQRWQIRVVDNGQG 62 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M E++ H TSKI D D ++I + GFRGEAL SI V+ LT+ S G Q Sbjct: 63 MDLEDLQQCALPHRTSKIGDRQDLAHIKSLGFRGEALHSIAQVAKLTIASCQDGQP-GYQ 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + +S M GT+V V D+F P R + L + + +I +A+ P Sbjct: 122 LTVQQNHVSEPLLKPMAVGTMVTVTDIFQNFPVRRHALPAIAQQLKTAQQMIYHLALGQP 181 Query: 181 KVSFTFSTIKSNRYKMNF-QSTNGNFPERISQVIGEDFINNAV-------ELNEKSNEIT 232 ++++ + + ++ ++ P+ + + +D I E N Sbjct: 182 QITWQVNQNNQPWFVISAGKNAQEILPQLLRSISIQDLIFQRYQATDFLTENNSDYATSY 241 Query: 233 LQGYTGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 L+ G+P +R A+ + INGR V+ + I ++ T+P R+P+ + L + Sbjct: 242 LEVVLGLPDRCHRHQADWLKLAINGRIVKFSALEQAIMKGFSRTLPRDRHPICFVHLHVP 301 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 P +D N HPAKS I ++ T+ + I Q+I K ++ + + +++++S Sbjct: 302 PEHIDWNRHPAKSEIYLQHQTLWQEIIPQAIAKGLSFSEANLPRLENQRVLSLIQAAEKK 361 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 + + + + + T + H ++ Sbjct: 362 ENYSIEPPSEHSTTS--------------------------------ASNPHKKVLKVIG 389 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 Q YII++ DG+ +V+QH A ER I+E + +++ + + DL + Sbjct: 390 QARNTYIITEHPDGIWLVEQHIADERAIYEDLCKNWQL----ISPIQPVLLNDLSPKQIE 445 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL-SKKNIPQLLRDIIDEIIDSSTTYTLQ 530 + + +LG+ E FG N + IP L ++ L ++ + Sbjct: 446 QLTD------QLGLDLEIFGENVWRVNTIPRALQGHSDLEAALLEL-----------SRG 488 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 +E +AC ++R+G + M ++ ++ N S C HGRP ++ L+ + + + Sbjct: 489 GDLEAAQVAIACRTAVRNGTPLDFPTMQTIIDRWQQCENPSTCPHGRPIYLALEETSLYR 548 Query: 591 LFGR 594 F R Sbjct: 549 FFRR 552 >gi|149005925|ref|ZP_01829654.1| DNA mismatch repair protein [Streptococcus pneumoniae SP18-BS74] gi|147762281|gb|EDK69242.1| DNA mismatch repair protein [Streptococcus pneumoniae SP18-BS74] Length = 535 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 158/535 (29%), Positives = 262/535 (48%), Gaps = 47/535 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I + + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---- 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMTLVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKEN 360 Query: 357 -----KYATSLTNTQE------------------------------KLFLQENRLSTNDL 381 K S + E KL E + + D Sbjct: 361 TLYYEKTEPSRPSQTEVADYQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQ 420 Query: 382 LPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 L + + + D +E EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ Sbjct: 421 LDHPELDLASIDKAYDKLEREEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERV 480 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 +E+ R+ + + Q LL P I + + + E L +G+ +G N Sbjct: 481 KYEEYRESIGNVDQSQQQLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGEN 535 >gi|153840107|ref|ZP_01992774.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus AQ3810] gi|149746286|gb|EDM57358.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus AQ3810] Length = 669 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 153/651 (23%), Positives = 271/651 (41%), Gaps = 89/651 (13%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ IKEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVIKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SRP Sbjct: 61 KGIAKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRPAAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMQVKLQPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS + +RI+ V G F+ N + + + + L G+ Sbjct: 181 SRFDVSINVRHNGKVIRQYRAAKNQLQTEKRIAAVCGNAFVRNMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE-------- 289 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E Sbjct: 241 TTPDGARQQSDLQYCYVNGRMMRDKLINHAIRQSYEMSLKPDQFAAYVLFIELDPHQVDV 300 Query: 290 -IDPRQVDVNVH-------------------------PAKSYIRFRN------------- 310 + P + +V H P + F Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALADALAQSSVIDKPQVNESAFHRAEPEERESQPETT 360 Query: 311 ------------PTIIRNFI--------IQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 P + I + + S SSV ++ SF + + Sbjct: 361 PQYSPQSVSTTVPKRVYQAIDKTPTYPGRTDYEIKPRDRAPSDSSVREARIADSFKRTDW 420 Query: 351 PKTHLPKYAT-------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 ++ L ++ ++ L T D + E S Sbjct: 421 IESKLAPKPNVGKERHAEPAPSKREVHAYHELLKTPDFESQQAEQPTSIESVREVSLPQV 480 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 LG A + + +++ + G+ +V + ++ + + +Q LL P + Sbjct: 481 TALGKALVVVDEQFVLMSSDSGVALVSLPRSEFYRTKGQL--TPSEGALKAQPLLVPLSM 538 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII-- 521 L L ++ +D +LGI+ + A+ + +PA L ++N+ L+ D++ Sbjct: 539 KLDTDLVRLAQDYQQDFAQLGIQLKARNDKALMVMGVPAPLRQQNLQNLVPDLLSYAQTW 598 Query: 522 ---DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 + ++T L I+ + + +++S + E +++ E+E+ + Sbjct: 599 MKGEKASTQMLPALIDWLAVQV---TTVKSHYTLS--EAIQIIAELEQLRH 644 >gi|85710758|ref|ZP_01041819.1| DNA mismatch repair enzyme, ATPase [Idiomarina baltica OS145] gi|85695162|gb|EAQ33099.1| DNA mismatch repair enzyme, ATPase [Idiomarina baltica OS145] Length = 574 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 140/550 (25%), Positives = 268/550 (48%), Gaps = 16/550 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++L ++ NQIAAGE++ERP+ +KEL+EN+LDA++S + I GG +I DNG Sbjct: 1 MPIKQLPVELANQIAAGEVVERPASIVKELVENALDAKASELVIDIESGGAKRIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS L L+S+P + + Sbjct: 61 VGIPRDELALALSRHATSKIADIDDLEAITSLGFRGEALASISSVSRLRLVSKPAEQSAA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G+ + + P + GT V+++D+F+ PAR FL++++ E I +VI+R+A+ Sbjct: 121 WQAWSEGKDMQVRIEPASHPDGTTVDIQDVFYNTPARRKFLRTDKTEFGHIDEVIKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNF--PERISQVIGEDFINNAVELNEKSNEITLQG 235 + + T + S + R+++V G F +A+ + +++I ++G Sbjct: 181 SRWDIDITLNHNGKRVRYYPAVSEHDQLHWRRRLAKVCGSGFAQDALYFQQHAHDIHIEG 240 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 + P R + Y F+NGR ++DK I IR AY + R P + L + QV Sbjct: 241 WLAAPEQCRHQGDVQYSFVNGRMMKDKLINHAIRQAYDSFLTAERVPTFAIYLTVPADQV 300 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHPAK +RF + +F++ ++++ + + ++ S ++ + Q Sbjct: 301 DVNVHPAKHEVRFHQQRQVHDFVLNTVKQLLLGQHQEDTNSASDRVEDATQQPRHLYQTG 360 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 +N + + + +T + + ++ H Sbjct: 361 GSKKHVTSNPSVRDYSAHAQSNTANRSRLGASILPNAVELTVDARQW-----RIVDVFHG 415 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM- 474 + + + + +D RL+ +++Q + + Q LL + I+L E E Sbjct: 416 RFALIRRDEQPAWLDLVNVQRRLLEPQIKQQYQ-QGMAGQPLLVEQKINLSETEWTKKQV 474 Query: 475 -EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE--IIDSSTTYTLQD 531 ++ +L + G+ G + + ++P++L +K+I + ++++ + D + L D Sbjct: 475 SQYSSELAQSGVSFYWQGA-SFIVTQVPSMLRRKHIASSVLSLLEQCKLSDQAIIEFLAD 533 Query: 532 RIENILATMA 541 + + + + Sbjct: 534 AAVDTMLSKS 543 >gi|28899593|ref|NP_799198.1| DNA mismatch repair protein [Vibrio parahaemolyticus RIMD 2210633] gi|260876666|ref|ZP_05889021.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus AN-5034] gi|260896641|ref|ZP_05905137.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus Peru-466] gi|31076794|sp|Q87L05|MUTL_VIBPA RecName: Full=DNA mismatch repair protein mutL gi|28807829|dbj|BAC61082.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus RIMD 2210633] gi|308086324|gb|EFO36019.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus Peru-466] gi|308094004|gb|EFO43699.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus AN-5034] Length = 669 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 153/651 (23%), Positives = 271/651 (41%), Gaps = 89/651 (13%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ IKEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVIKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SRP Sbjct: 61 KGIAKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRPAAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMQVKLQPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS + +RI+ V G F+ N + + + + L G+ Sbjct: 181 SRFDVSINVRHNGKVIRQYRAAKNQLQTEKRIAAVCGNAFVRNMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE-------- 289 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E Sbjct: 241 TTPDGARQQSDLQYCYVNGRMMRDKLINHAIRQSYEMSLKPDQFAAYVLFIELDPHQVDV 300 Query: 290 -IDPRQVDVNVH-------------------------PAKSYIRFRN------------- 310 + P + +V H P + F Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALADALAQSSVIDKPQVNESAFHRAEPEERESQPETT 360 Query: 311 ------------PTIIRNFI--------IQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 P + I + + S SSV ++ SF + + Sbjct: 361 PQYSPQSVSTTVPERVYQAIDKTPTYPGRTDYEIKPRDRAPSDSSVREARIADSFKRTDW 420 Query: 351 PKTHLPKYAT-------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 ++ L ++ ++ L T D + E S Sbjct: 421 IESKLAPKPNVGKERHAEPAPSKREVHAYHELLKTPDFESQQAEQPTSIESVREVSLPQV 480 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 LG A + + +++ + G+ +V + ++ + + +Q LL P + Sbjct: 481 TALGKALVVVDEQFVLMSSDSGVALVSLPRSEFYRTKGQL--TPSEGALKAQPLLVPLSM 538 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII-- 521 L L ++ +D +LGI+ + A+ + +PA L ++N+ L+ D++ Sbjct: 539 KLDTDLVRLAQDYQQDFAQLGIQLKARNDKALMVMGVPAPLRQQNLQNLVPDLLSYAQTW 598 Query: 522 ---DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 + ++T L I+ + + +++S + E +++ E+E+ + Sbjct: 599 MKGEKASTQMLPALIDWLAVQV---TTVKSHYTLS--EAIQIIAELEQLRH 644 >gi|111115035|ref|YP_709653.1| DNA mismatch repair protein [Borrelia afzelii PKo] gi|216264048|ref|ZP_03436042.1| DNA mismatch repair protein MutL [Borrelia afzelii ACA-1] gi|123341395|sp|Q0SNV1|MUTL_BORAP RecName: Full=DNA mismatch repair protein mutL gi|110890309|gb|ABH01477.1| DNA mismatch repair protein [Borrelia afzelii PKo] gi|215980092|gb|EEC20914.1| DNA mismatch repair protein MutL [Borrelia afzelii ACA-1] Length = 611 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 152/623 (24%), Positives = 274/623 (43%), Gaps = 45/623 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLEEGGIQKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISQEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTGNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV+V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIEKCFKKQPAINGTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN ++ ++ I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFKVLKKEHENIKIEIFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ + G +P+ L LEI+P +D N Sbjct: 238 PANFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSRILSPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS---FHQDNAPKTHL 355 VHP K +RF N + I +I +K + V+ K+ ++ + + Sbjct: 298 VHPQKKEVRFFNLPFLFKLISDNINNFFDKDTNNYHDVIIKRQLTDDDHLIEMINQSENF 357 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA-------------- 401 K +T + L ++N N + D + N +E + Sbjct: 358 NKTSTYDVPQNKNLETEDNTNEPNKNMIQKDVGLRKYNSIIENRPSLKENITNIFSDSFL 417 Query: 402 ----------THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 EFEEPPNKNEEEDIKFNYIGQIFSEFLIVEKANEIYFIDQHAVHEKIIYEKLR---NSKK 474 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + L+ E + + +I E+ ++ I + G + IP I ++ Sbjct: 475 TIQKLLIPIEFTIVDKNIEKIIDSEIEEYKKMDIIISKIGSEKYQLESIPNICNQYE--- 531 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 + + S + T+ ++ AT+AC ++++ + L+ E K Sbjct: 532 ---NTLINFFQSRRSRTINSLESDLYATIACRKAVKTNDILSVEFSKYLINEFFKLE-IK 587 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 HCPHGRKIYYKISKFELEKKVDR 610 >gi|256545159|ref|ZP_05472525.1| DNA mismatch repair protein MutL [Anaerococcus vaginalis ATCC 51170] gi|256399200|gb|EEU12811.1| DNA mismatch repair protein MutL [Anaerococcus vaginalis ATCC 51170] Length = 603 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 161/611 (26%), Positives = 290/611 (47%), Gaps = 26/611 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI +L +K I +IAAGE+IE P +KEL+EN++DA++ + I GGKS+ ++TD+G Sbjct: 2 MKIIELDKKTIEKIAAGEVIESPVSIVKELVENAIDAKAKNIVVEIKNGGKSYIRVTDDG 61 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++ +A +RH TSKI D D ++ T GFRGEAL SI A +++ +S+ N G Sbjct: 62 IGIDEDDFKIAFKRHATSKIKDFSDLYDLFTLGFRGEALSSIVACANIKAISKTKNQNLG 121 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ I S +A N GT +EV DLF +P R FL S+ E+N I +++ +A+ Sbjct: 122 KELIFENGNIKSYNSIATNMGTSIEVYDLFSNLPVRRKFLSSDINESNKIAKIMQALALG 181 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 Y VSF F + + + +I +++ E+ +N +++ +++ ++G+ Sbjct: 182 YNDVSFKFIKDNRLIFHTL---KDQDMDNKIIELLDENLKDNLIKIEIQNSLYKIKGFIS 238 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + RGN + Y+F+N R +++ I I Y IP R+P + +E + +DVN Sbjct: 239 KVNYYRGNRSFQYIFVNNRLIENDNISKAIENEYRTLIPNQRFPAFFIFIETNSNNIDVN 298 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH-----QDNAPKT 353 +HP K I+F + + + I K + + +S+K + + Sbjct: 299 IHPNKKEIKFTYQNELIDLLEDKISKILYENINIREVKVSEKNKEELNFYDDYSEILNSY 358 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT----------H 403 + K + N ++ +E D + + E N+ +E+ + Sbjct: 359 NRVKEEDNSYNFEKNPDKKEQAKKEEDFFSGVELNFIEKNEIIEDIDYNKKSLGTVKKLE 418 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 I I Y + D ++I+D A +R+ F+K ++FN+ KI+SQ L+ +I+ Sbjct: 419 IDKLIYKCSIFNRYSLFSYNDKILILDNRRADQRIKFDKYIENFNNGKISSQQLIESKIV 478 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 + E +E E ++G E F + + IR +P I + D++D ID Sbjct: 479 KVNLQEYNKYLEKKEIFKKMGFDIEEFSYDKLIIRAVPFIFEEPENNNFFYDLLD--IDE 536 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++I ++ R G + E + ++ K N + G+ T I + Sbjct: 537 KNENLFLNKISKLIN----KNVFRKGDLINKSEAMATIDKLNKCDNPYKTYDGKSTIIMI 592 Query: 584 KLSDIEKLFGR 594 + ++EK F R Sbjct: 593 EEDELEKYFDR 603 >gi|158336588|ref|YP_001517762.1| DNA mismatch repair protein [Acaryochloris marina MBIC11017] gi|158306829|gb|ABW28446.1| DNA mismatch repair protein MutL [Acaryochloris marina MBIC11017] Length = 573 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 146/607 (24%), Positives = 273/607 (44%), Gaps = 66/607 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++++IAAGE+I+ ++EL++N+LDA + R+ + Q+ DNG Sbjct: 9 QIQPLGTDLVHRIAAGEVIDSLGAVVRELLDNALDAGADRISVSLW-PQDWRIQVVDNGQ 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+T+ + A H TSK+ +D +I T GFRGEAL S+ + L + SRP + G Sbjct: 68 GLTAANLAQAATPHTTSKLQREEDLWDIQTLGFRGEALHSLAQMGRLEICSRPVGSAQGC 127 Query: 120 QIAISGEKISSVRPVAMNP-GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ + + GT+ V DLF P R L + + +I A+ Sbjct: 128 RVRYDHQGHVVAQETVAIAPGTVATVADLFQDWPTRKQALPDPARQMRGVQTIIHDYALC 187 Query: 179 YPKVSFTFSTIKSNRYKM-NFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +P+V++ + + ++ P+ ++ + D ++ ++ + ++ Sbjct: 188 HPQVTWQVQQNNRLWFSIAPAKAAQDILPQLLATLQPGDLCHHRCQIPDLPGNNVVEVVL 247 Query: 238 GIP-TFNRGNANQFYVFINGRTVQ--------DKFILSTIRTAYAETIPLGRYPVVVLLL 288 G+P +R + V +NGR VQ + TI A+ +T+P R+P+ + L Sbjct: 248 GLPDRCHRHRPDWVKVAVNGRCVQVSGEDAGQSHPLEQTILGAFRQTLPRHRHPLCFIHL 307 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 DP+ VD + HPAK+ I R+ R + +IQ+A+ S ++K+ Sbjct: 308 HADPQHVDWHRHPAKTEIYLRHLDQWRPAVTTTIQEALQIPAEIQDSGHTQKIRQLMKVA 367 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 A + + + L++ E+ + + + Sbjct: 368 EAKGVYHLQQPSLLSSQPEQAAGESG-----------------------------FNVLK 398 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 A AQ+H+ YI+++ G+ +V+QH AHER+++E++ QD++ +T +L Sbjct: 399 AIAQLHRTYIVAEHPSGVWLVEQHIAHERVLYEQLGQDWHLVPLTPPMML---------- 448 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK-NIPQLLRDIIDEIIDSSTTY 527 L E L +GI FG AIR P L+++ + L ++ Sbjct: 449 -RDLTERQVEQLTDIGIDITEFGHQLWAIRSAPQRLAERPDCEAALIEL----------- 496 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 + + IE LA AC +IR+G + +EM LL + ++ + C HGRP ++ ++ +D Sbjct: 497 SQCESIEAALAATACRSAIRNGMALNLLEMQNLLDQWQQTRHPRTCPHGRPIYLSMEEAD 556 Query: 588 IEKLFGR 594 + + F R Sbjct: 557 LSRFFRR 563 >gi|260900901|ref|ZP_05909296.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus AQ4037] gi|308106528|gb|EFO44068.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus AQ4037] Length = 669 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 153/651 (23%), Positives = 271/651 (41%), Gaps = 89/651 (13%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ IKEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVIKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SRP Sbjct: 61 KGIAKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRPAAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGLDMQVKLQPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS + +RI+ V G F+ N + + + + L G+ Sbjct: 181 SRFDVSINVRHNGKVIRQYRAAKNQLQTEKRIAAVCGNAFVRNMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE-------- 289 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E Sbjct: 241 TTPDGARQQSDLQYCYVNGRMMRDKLINHAIRQSYEMSLKPDQFAAYVLFIELDPHQVDV 300 Query: 290 -IDPRQVDVNVH-------------------------PAKSYIRFRN------------- 310 + P + +V H P + F Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALADALAQSSVIDKPQVNESAFHRAEPEERESQPETT 360 Query: 311 ------------PTIIRNFI--------IQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 P + I + + S SSV ++ SF + + Sbjct: 361 PQYSPQSVSTTVPERVYQAIDKTPTYPGRTDYEIKPRDRAPSDSSVREARIADSFKRTDW 420 Query: 351 PKTHLPKYAT-------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 ++ L ++ ++ L T D + E S Sbjct: 421 IESKLAPKPNVGKERHAEPAPSKREVHAYHELLKTPDFESQQAEQPTSIESVREVSLPQV 480 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 LG A + + +++ + G+ +V + ++ + + +Q LL P + Sbjct: 481 TALGKALVVVDEQFVLMSSDSGVALVSLPRSEFYRTKGQL--TPSEGALKAQPLLVPLSM 538 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII-- 521 L L ++ +D +LGI+ + A+ + +PA L ++N+ L+ D++ Sbjct: 539 KLDTDLVRLAQDYQQDFAQLGIQLKARNDKALMVMGVPAPLRQQNLQNLVPDLLSYAQTW 598 Query: 522 ---DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 + ++T L I+ + + +++S + E +++ E+E+ + Sbjct: 599 MKGEKASTQMLPALIDWLAVQV---TTVKSHYTLS--EAIQIIAELEQLRH 644 >gi|328472281|gb|EGF43151.1| DNA mismatch repair protein [Vibrio parahaemolyticus 10329] Length = 669 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 159/651 (24%), Positives = 271/651 (41%), Gaps = 89/651 (13%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ IKEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVIKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SRP Sbjct: 61 KGIAKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRPAAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMQVKLQPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS + +RI+ V G F+ N + + + + L G+ Sbjct: 181 SRFDVSINVRHNGKVIRQYRAAKNQLQTEKRIAAVCGNAFVRNMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE-------- 289 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E Sbjct: 241 TTPDGARQQSDLQYCYVNGRMMRDKLINHAIRQSYEMSLKPDQFAAYVLFIELDPHQVDV 300 Query: 290 -IDPRQVDVNVH-------------------------PAKSYIRFRN------------- 310 + P + +V H P + F Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALADALAQSSVIDKPQVNESAFHRAGPEERESQPKTT 360 Query: 311 ------------PTIIRNFI--------IQSIQKAINKKGISTSSVLSKKMISSF-HQDN 349 P + I + + S SSV ++ SF D Sbjct: 361 PQYSPQPVSTTVPERVYQAIDKTPTYPGRTDYEVKPRDRAPSDSSVREARIADSFKRTDW 420 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE------ATH 403 PK E + + ++LL + D + P Sbjct: 421 IESKPAPKPNVGKERHAEPAPSKREVHAYHELLKTPDFESQQAEQPTSTESVREVSLPQV 480 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 LG A A + + +++ + G+ +V A K+ + + +Q LL P + Sbjct: 481 TALGKALAVVDEQFVLMSSDSGVALVSLPRAEFYRTKGKL--TPSEGALKAQPLLVPLSM 538 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII-- 521 L G L + +D +LGI+ + A+ + +PA L ++N+ L+ D++ Sbjct: 539 KLDTGLVKLAQNYQQDFAQLGIQLKARNDKALMVMGVPAPLRQQNLQNLVPDLLSYAQTW 598 Query: 522 ---DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 + ++T L I+ + + +++S + E +++ E+E+ + Sbjct: 599 MKGEKASTQMLPALIDWLAVQV---TTVKSHYTLS--EAIQIIAELEQLRH 644 >gi|268592882|ref|ZP_06127103.1| DNA mismatch repair protein MutL [Providencia rettgeri DSM 1131] gi|291311672|gb|EFE52125.1| DNA mismatch repair protein MutL [Providencia rettgeri DSM 1131] Length = 656 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 130/405 (32%), Positives = 214/405 (52%), Gaps = 8/405 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I LS ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG+ +I DNG Sbjct: 1 MAIHILSPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGEKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL S+P Sbjct: 61 CGISKDELILALARHATSKIATLDDLEAIMSMGFRGEALASISSVSRLTLTSKPADQTEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + V+P A GT VEV DLF+ PAR F+++E+ E I +++RR+A+ Sbjct: 121 WQSYAEGRDMEVIVKPAAHPNGTTVEVLDLFYNTPARRKFMRTEKTEFGHIDEIVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + P V+ + + R+ + G F+ A+ L+ + +++ ++G+ Sbjct: 181 SRPDVAINLTHNGKLVKQYRAAHDEAQQERRLGTICGTGFMQGALALSWEHSDLAIKGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P+ + Y ++NGR ++D+ I IR AY + + P VL L IDP+QVDV Sbjct: 241 VSPSMT-SGSETQYCYVNGRMMRDRLINHAIRQAYEGHLDENQQPAYVLYLTIDPKQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q+++ + + +S+ I + + + + Sbjct: 300 NVHPAKHEVRFHQARLVHDFIYQAVRTVL----LEAASIDELPGIEPVNTELENRPSAGE 355 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 S + K E++ + L Y + + ++ Sbjct: 356 NYFSSPSVAPKQHKAEDKTIVENTLLEPKTPYKQASHLKNNAKNH 400 >gi|86607230|ref|YP_475993.1| DNA mismatch repair protein [Synechococcus sp. JA-3-3Ab] gi|86555772|gb|ABD00730.1| putative DNA mismatch repair protein MutL [Synechococcus sp. JA-3-3Ab] Length = 583 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 148/598 (24%), Positives = 267/598 (44%), Gaps = 73/598 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L+ + I Q+AAGE+I+ A++EL+EN+LDA+++R++ I + ++ DNG Sbjct: 3 KIQPLNPERIAQMAAGEVIDSLGAALRELLENALDAQATRIQVEIW-PSRWQVRVADNGQ 61 Query: 62 GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 G+ + E+ +RH TSK+ + GFRGEAL S+ + LT+ +R + G Sbjct: 62 GIPASELEQVARRHTTSKLDG-----CSLGFRGEALHSLARLGSLTIQTRHADDAHGWLA 116 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + +++ +P A GT+V V DLF P R L + +++ A+A+P Sbjct: 117 TYDRQGELAHQQPAATALGTVVTVADLFADWPLRRCSLPQTRPLL----TLVQNAALAHP 172 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 VS+ + + + + QV+ + +++ + + + G+P Sbjct: 173 WVSWQVRQEGQLLLSLW---PGQSLQDLLLQVLPQVDLSDLRYQRIQEGDSDWEVVLGLP 229 Query: 241 -TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 +R + V +NGR VQ I++ + T+P RYP+VV+ L + P QVD N Sbjct: 230 DRLHRPRPDWIRVAVNGRFVQMPEWQRLIQSVFQHTLPRHRYPLVVVHLRLPPEQVDWNR 289 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAKS + ++P I + + Q + + S + +S + T PK Sbjct: 290 HPAKSELYLQDPEIRQEQLRQHLHALLQSGSEQASRRSLHLIRASEAKSVYRVTSSPKSP 349 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + Q L A AQ+++ YI+ Sbjct: 350 DPAPSGQPSTPLPP---------------------------------LKALAQLYRTYIL 376 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ GL +V+QH AHER+ +E +++ + ++ +L E Sbjct: 377 AEHPQGLWLVEQHLAHERVRYEYIQRHWQPVELQMPVMLEGLSSQA-----------VEQ 425 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQL---LRDIIDEIIDSSTTYTLQDRIENI 536 L +LG++ E FGPN +R +P L ++ ++ LR++ + +E Sbjct: 426 LEQLGLEPEPFGPNTYLMRRLPLALWSEDPEEVQGSLREL-----------SRCADLEAA 474 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC G++R+G + +M +LL ++ N C HGRP ++ L D+ + F R Sbjct: 475 QVAVACRGALRNGIPLTLEQMQQLLEAWQRTANPHTCPHGRPVYLALAEKDLARYFRR 532 >gi|261254059|ref|ZP_05946632.1| DNA mismatch repair protein MutL [Vibrio orientalis CIP 102891] gi|260937450|gb|EEX93439.1| DNA mismatch repair protein MutL [Vibrio orientalis CIP 102891] Length = 647 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 149/558 (26%), Positives = 249/558 (44%), Gaps = 59/558 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LT+ SRP Sbjct: 61 KGIVKDELGLALSRHATSKIHTLDDLEAIISLGFRGEALASISSVSRLTMTSRPATQEQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGREMQVKLQPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + T+ +RI+ V G F+ + +++ + + L G+ Sbjct: 181 SRFDVTINVRHNGKLIKQYRAAKTDAQAEKRIAAVCGSAFVRHMLKIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TAPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRPDQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS------------------TSSVLSK 339 NVHPAK +RF ++ +FI Q++ A+ + + + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSDALAQSAHIDKPEQTASAFHIEPAHTESEAAPVE 360 Query: 340 KMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTND------------------- 380 Q+ +P Y + Q + L+E+R + Sbjct: 361 SSPQVSSQEYQAIESVPSYPGKVDYQQSRDNLRESRPRSEWNESRPTSKPRVTERYSEPA 420 Query: 381 ------LLPSDDPTYSEDNDPVEESEATHYQL-----------GIACAQIHQNYIISQTT 423 + + E + E G A + +Y++ Sbjct: 421 PSQREVKVYQELMQTPECDPIQAEQPKQEKITEQAPLPVVEDLGKAMHVVQGHYLVMGGK 480 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 G +V A + ++ + + SQ LL P + L E + + L Sbjct: 481 TGTCLVSLAKAEWLRVNGQL--ATHRGSLKSQPLLVPLALKLDEELLNTASKLEPVLKVF 538 Query: 484 GIKAERFGPNAIAIREIP 501 GI+ + G A+ I +P Sbjct: 539 GIELKARGSKALMIMGVP 556 >gi|153820288|ref|ZP_01972955.1| DNA mismatch repair protein MutL [Vibrio cholerae NCTC 8457] gi|126509170|gb|EAZ71764.1| DNA mismatch repair protein MutL [Vibrio cholerae NCTC 8457] Length = 396 Score = 375 bits (963), Expect = e-101, Method: Composition-based stats. Identities = 131/398 (32%), Positives = 215/398 (54%), Gaps = 6/398 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ + GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ + ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ A+ + + +++ +FH + + P Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQGAQVMAPTINE---GAFHLPHCAEEVNPP 357 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 + TQ++ Q + + + + +++D Sbjct: 358 VVPMIDTTQQERVWQAVQNTPDYPRKAPRDNDRDESDN 395 >gi|254509325|ref|ZP_05121415.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus 16] gi|219547754|gb|EED24789.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus 16] Length = 652 Score = 375 bits (962), Expect = e-101, Method: Composition-based stats. Identities = 148/563 (26%), Positives = 247/563 (43%), Gaps = 64/563 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +V+ LT+ SRP Sbjct: 61 KGIVKDELGLALSRHATSKIHTLDDLEAIISLGFRGEALASISSVARLTMTSRPATQEQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G +++ +P A GT VEV DLFF PAR FL++E+ E + I ++I+R+A+ Sbjct: 121 WSAYTEGREMAVKLQPTAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFSHIDELIKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + T +RI+ V G F+ N +++ + + L G+ Sbjct: 181 SRFDVTINLRHNGKMIKQYRAAKTEVQAEKRIATVCGSAFVRNMLKIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLKPEQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI--------------- 342 NVHPAK +RF ++ +FI Q++ A+ + ++ Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSDALAQSAHIDKPEITASAFHTQEPLNDADKGLTS 360 Query: 343 ------------------------------------SSFHQDNAPKTHLPKYATSLTNTQ 366 +S + P A S Sbjct: 361 EPTHQPVSERVYDAVDKIPSYPGRSDYNERRSEVREASVRSEWIESKPQPNKAKSSERYA 420 Query: 367 EKLFLQENRLSTNDLLPSDD--------PTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 E ++ + +LL + D + A LG A Y+ Sbjct: 421 EPAPSKQEVRAYQELLKTPDLEPISAPVGQDRNAEENESSPAAVVDSLGKAICMASGRYV 480 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 G+ +V+ A + ++ + + SQ LL P + L + + + Sbjct: 481 AMGNKQGVHLVNLAKAEWLRVNGQL--STRNGSLKSQPLLVPLSLKLDPEQIQVAERLET 538 Query: 479 DLHRLGIKAERFGPNAIAIREIP 501 L GI+ ++ A+ + +P Sbjct: 539 LLLTFGIELKKRNHQAMMVMGVP 561 >gi|269137708|ref|YP_003294408.1| DNA mismatch repair enzyme [Edwardsiella tarda EIB202] gi|267983368|gb|ACY83197.1| DNA mismatch repair enzyme [Edwardsiella tarda EIB202] gi|304557762|gb|ADM40426.1| DNA mismatch repair protein MutL [Edwardsiella tarda FL6-60] Length = 639 Score = 375 bits (962), Expect = e-101, Method: Composition-based stats. Identities = 158/627 (25%), Positives = 268/627 (42%), Gaps = 72/627 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ +A+ RH TSKIS DD I + GFRGEAL SI +VS LT+ SRP Sbjct: 61 SGIGKAELALALARHATSKISTLDDLEAIVSLGFRGEALASISSVSRLTMTSRPEGQAEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGREMAVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFAHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A ++ T + R+ + G F+ +A+ L + +++ + G+ Sbjct: 181 ARFDITLTLQHNGKTVRQYRAVREGDARERRLGAICGTAFVQHALALAWRHDDLAIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R Y ++NGR ++D+ I IR AY + + P VL LEIDPRQVDV Sbjct: 241 AAPQAIRQIGELQYCYVNGRMMRDRLITHAIRQAYQDRLSDELPPAYVLYLEIDPRQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ + + ++++ D P+ + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVVDVLQQAQVASAQDDPTLATPGAALDEGPRGVENR 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTY---------------------------- 389 + + Sbjct: 361 ASAGENRFNRPASSPIASAPRPAHAAAPRMPAGDIFRRREGELYQRLLAASPTPAGETDS 420 Query: 390 ----------------SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 + E A LG +++ G+ +V Sbjct: 421 AFVAAPSAPLPAAEPPAVAVSTAAERAAPGDSLGRVLTLCADGVALTECRRGVALVSLSY 480 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 A L+ +++ + +Q LL P + L E + L ++GI+ + + Sbjct: 481 ARRCLLRAQLQPS--DEGLKAQPLLVPLRLTLEAAERQALQAQQPLLQQMGIRLQPERQH 538 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA------CYGSIR 547 A + +P L ++N+P+L+ ++ + + A++A + + Sbjct: 539 A-QLHAVPLPLRQQNLPRLIPQMLRYLATAPACD---------AASLADWLAVHWHSADE 588 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCN 574 + + +LL ++E+ C Sbjct: 589 A--PWTVAQAVQLLADLERL-----CP 608 >gi|157838229|pdb|1B62|A Chain A, Mutl Complexed With Adp Length = 355 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 128/348 (36%), Positives = 195/348 (56%), Gaps = 4/348 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 7 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 66 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 67 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 126 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 127 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 186 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 187 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 246 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 247 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 306 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 307 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAP 354 >gi|224534215|ref|ZP_03674793.1| DNA mismatch repair protein MutL [Borrelia spielmanii A14S] gi|224514317|gb|EEF84633.1| DNA mismatch repair protein MutL [Borrelia spielmanii A14S] Length = 611 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 156/623 (25%), Positives = 279/623 (44%), Gaps = 45/623 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLEEGGIHKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISQEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTNNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI I + GTIV+V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEIENGIEKCFKKQPPINGTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN ++ ++ I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFKVLKKEHENIKIEIFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I +++ + G +P+ L LEI+P VD N Sbjct: 238 PANFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSKILSPGNFPICYLFLEINPEYVDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS---FHQDNAPKTHL 355 VHP K +RF N + I +I +K S + V+ K+ ++ + + Sbjct: 298 VHPQKKEVRFFNLPFLFKLISDNINNFFDKDLNSYNDVIIKRQLTDDDHLIEMINQSENF 357 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA-------------- 401 K T + + L ++EN N + +D + N ++ + Sbjct: 358 NKNNTYNISQNKNLEIEENINELNKNIIQNDVGLKKYNSIIQNRPSLKENITNIFSDTFL 417 Query: 402 ----------THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 QI ++I + + + +DQHA HE++I+E++R NS K Sbjct: 418 EFEEQPNKNEQEEIQFNYIGQIFSEFLIVEKVNEIYFIDQHAVHEKIIYEQLR---NSKK 474 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + L+ E + + +I E+ ++ I + GP + IP I ++ Sbjct: 475 TVQKLLIPIEFTIVDKNIEKIIDSEIEEYKKMDITISKIGPEKYQLESIPNICNQYE--- 531 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 + I S + T+ ++ AT+AC ++++ + L+ E K Sbjct: 532 ---NTIIHFFQSRKSRTIDSLESDLYATIACRKAVKTNDILSVEFSKFLINEFFKLE-IK 587 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 HCPHGRKIYFKISKFELEKKVDR 610 >gi|220909071|ref|YP_002484382.1| DNA mismatch repair protein [Cyanothece sp. PCC 7425] gi|219865682|gb|ACL46021.1| DNA mismatch repair protein MutL [Cyanothece sp. PCC 7425] Length = 575 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 150/620 (24%), Positives = 279/620 (45%), Gaps = 84/620 (13%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVI--AGGGKSFFQITDN 59 IR L +++ IAAGE+I+ ++EL+EN+LDA+++R+ + G Q+ DN Sbjct: 3 TIRPLPTDLVHLIAAGEVIDSLVAVVRELVENALDAKATRIVITLCPEAWG---IQVADN 59 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM ++ A H TSKI+ +D + I T GFRG+AL S+ + L + SR Q+ Sbjct: 60 GCGMALADLQQAAAPHTTSKITRLEDLNQIRTLGFRGQALHSLAQLGQLEICSRSSQDAE 119 Query: 118 GAQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G + + ++ ++ +A++ GT V V LF P R L V+ + +I +MA Sbjct: 120 GWRVTYNNRGEVEQLQAIALSIGTTVTVNALFAAWPGRRQSLPPLAVQLRAVQTLISQMA 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFP---ERISQVIGEDFINNAVELNE-----KS 228 + +P+V++ K+ NG + +D + + + + + Sbjct: 180 LCHPQVTWQVFQTKTQMGANLPNRVNGAQRPWFSLAAAKSAKDILLQVLPMLQPGDVGEL 239 Query: 229 NEITLQGYTGIP-TFNRGNANQFYVFINGRTVQ-------------DKFILSTIRTAYAE 274 ++ L+ G+P +R + + +NGR V + TI A+ Sbjct: 240 HQDHLELLIGLPERVHRHRPDWIQLAVNGRCVNICTREGQPADVQPLTSLEQTILQAFHR 299 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 T+P R+P+ + ++ P QVD N HP K+ I + + ++ +A+ +T Sbjct: 300 TLPRHRFPICFVHFKVPPDQVDWNRHPGKTEIYLDQLEFWQRQLQSALSQALGMTVNATL 359 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 + +++ + + + + HL + S++ E L Sbjct: 360 AEPARQFLKAAEAEGS--YHLSRSLQSVSANPEPLPAG---------------------- 395 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 + A AQ+HQ YI+++ GL +V+QH AHER+++E++ Q + + + Sbjct: 396 ---------WMALRAVAQVHQMYILAEHPTGLWLVEQHIAHERVLYEQLLQHWQIVDLET 446 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 +L L E L +L ++ E FG + A+R PA+L+++ + Sbjct: 447 PLIL-----------NQLSPAQVERLEQLNLEIEPFGVDLWAVRSAPALLAQR------Q 489 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 D +++ S L I+AT AC +IR+G + EM LL + ++ + C Sbjct: 490 DCGAALLELSLGEDLNA---AIVAT-ACRSAIRNGTPLSLEEMQNLLEQWQRTHHPRTCP 545 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRP ++ L+ + + + F R Sbjct: 546 HGRPIYLPLEETTLSRYFRR 565 >gi|224531620|ref|ZP_03672252.1| DNA mismatch repair protein MutL [Borrelia valaisiana VS116] gi|224511085|gb|EEF81491.1| DNA mismatch repair protein MutL [Borrelia valaisiana VS116] Length = 611 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 151/623 (24%), Positives = 274/623 (43%), Gaps = 45/623 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLEEGGIHKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISQEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTGNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV+V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIEKCFKKQPAINGTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN + ++ I L+ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIDNNKFRILKKEHENIKLEIFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ + G +P+ L LEI+P +D N Sbjct: 238 PANFSKKSKRHIKTFVNRRPIDQKDLLEAILNGHSRILSPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH---QDNAPKTHL 355 VHP K +RF N + I +I NK + + ++ K+ ++ H + + + Sbjct: 298 VHPQKKEVRFFNLPFLFKLISDNINNFFNKDINNYNDIIIKRQLTEDHNLIEMMSQPENF 357 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE------------------ 397 K T + L ++N N + +D N ++ Sbjct: 358 NKTDTYDVPQNKNLETEDNINEPNKNIIQNDINLIRYNSIIQNRPSLKENITNIFSDNFL 417 Query: 398 ------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 Q+ ++I + + + +DQHA HE++I+E++R NS K Sbjct: 418 EFEELTNKPEKEEIKFNYIGQVLSEFLIVEKVNEIYFIDQHAVHEKIIYEQLR---NSKK 474 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + L+ E + ++ E+ ++ I + GP + IP I ++ Sbjct: 475 TVQKLLIPIEFTIADKNTEEIVDSEIEEYKKMDIIISKIGPRKYQLESIPNICNQYE--- 531 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 + + S + T+ ++ AT+AC ++++ + L+ E K Sbjct: 532 ---NTLIHFFQSRRSRTINSLESDLYATIACRKAVKTNDILSVEFSKFLINEFFKLE-IK 587 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 HCPHGRKIYYKISKFELEKKVDR 610 >gi|5107506|pdb|1BKN|A Chain A, Crystal Structure Of An N-Terminal 40kd Fragment Of E. Coli Dna Mismatch Repair Protein Mutl gi|5107507|pdb|1BKN|B Chain B, Crystal Structure Of An N-Terminal 40kd Fragment Of E. Coli Dna Mismatch Repair Protein Mutl Length = 352 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 128/348 (36%), Positives = 195/348 (56%), Gaps = 4/348 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 4 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 63 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 64 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 123 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 124 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 183 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 184 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 243 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 244 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 303 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 VNVHPAK +RF ++ +FI Q + + ++ + + + + Sbjct: 304 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAP 351 >gi|219685877|ref|ZP_03540683.1| DNA mismatch repair protein MutL [Borrelia garinii Far04] gi|219672576|gb|EED29609.1| DNA mismatch repair protein MutL [Borrelia garinii Far04] Length = 611 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 152/623 (24%), Positives = 273/623 (43%), Gaps = 45/623 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLEEGGIHKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTGNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIKKCFKKQPAINGTIVNVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN ++ ++ I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFKVLKKEHENIKIELFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ I G +P+ L LEI+P +D N Sbjct: 238 PANFSKKSKRYIKTFVNRRPIDQKDLLEAITNGHSRIISPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ--DNAPKTHLP 356 VHP K +RF N + I +I +K + + ++ K+ ++ + + Sbjct: 298 VHPQKKEVRFFNLPFLFKLISDNINNFFDKDINNYNEIVIKRQLTDDDNLIEMINQPKTL 357 Query: 357 KYATSLTNTQEKLFLQE-------------------------NRLSTNDLLPSDDPTYSE 391 + TQ K E NR S + + + Sbjct: 358 NQTNTYNITQNKNLETEHTVNELSKNIIQNDIGLKRYNSIIQNRPSFKENITNIFSDDFL 417 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 + ++ QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 AFEELQNKNEKEEIKFNYIGQIFSEFLIVEKVNEIYFIDQHAVHEKIIYEKLR---NSKK 474 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + L+ E + + +I E+ ++ I + GP + IP I ++ Sbjct: 475 TVQKLLIPIEFTIVDKNIEEIIDSEIEEYKKMDIIISKIGPKKYQLESIPNICNQYE--- 531 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 + + S + T+ ++ AT+AC ++++ + L+ E K Sbjct: 532 ---NTLINFFQSRKSRTINSLESDLYATIACRKAVKTNDILSLEFSKFLIDEFFKLE-IK 587 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 HCPHGRKIYYKISKFELEKKVAR 610 >gi|262364457|gb|ACY61014.1| DNA mismatch repair protein [Yersinia pestis D182038] Length = 361 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 116/335 (34%), Positives = 190/335 (56%), Gaps = 3/335 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L SR + + Sbjct: 61 CGISKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLILTSRTAEQSEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +++P A G+ +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ + + R++ + G F+ +A+ + + ++ + G+ Sbjct: 181 ARFDVAINLNHNGKLIRQYRAAPDPAQHERRLASICGPAFLQHALAIAWQHGDLNIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++N R ++D+ I IR AY + + + P VL L+IDP QVDV Sbjct: 241 ADPAASHTLSEMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 NVHPAK +RF ++ +FI Q++ + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQAVTAVLQQTNAP 335 >gi|312149018|gb|ADQ29089.1| DNA mismatch repair protein MutL [Borrelia burgdorferi N40] Length = 610 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 150/622 (24%), Positives = 271/622 (43%), Gaps = 44/622 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLEEGGIQKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTSNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV+V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIEKCFKKQPAINGTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN + ++ + I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFRVLKKEHDNIKIEIFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ + G +P+ L LEI+P +D N Sbjct: 238 PNNFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSRILSPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ--DNAPKTHLP 356 VHP K +RF N + I +I +K + +++ K+ ++ + + Sbjct: 298 VHPQKKEVRFYNLPFLFKLISDNINNFFDKNINNYQNIIIKRQLTEDDHLIEMTNQPENF 357 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG--------- 407 + Q E+ N + N ++ +G Sbjct: 358 NKINTYDIPQNNNLETEDVNEPNKNTTQSNINLRRYNSIIQNRPTLRENIGNIFSDNFLE 417 Query: 408 ---------------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 FEEPLNKNEKEEIKFNYIGQIFSEFLIVEKINEIYFIDQHAVHEKIIYEKLR---NSKKN 474 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 + L+ E + + +I E+ ++ I + GP + IP I S+ Sbjct: 475 VQKLLVPIEFTVVDKNIEEIIDGEIEEYKQMDIIISKIGPKKYQLESIPNICSQYE---- 530 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + + S + T+ ++ AT+AC +++ + + L+ E K Sbjct: 531 --NTLINFFQSRRSRTINSLESDLYATIACRKAVKRNDMLSAEFSKFLINEFFKLE-IKH 587 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 CPHGRKIYYKISKFELEKKVDR 609 >gi|320335095|ref|YP_004171806.1| DNA mismatch repair protein mutL [Deinococcus maricopensis DSM 21211] gi|319756384|gb|ADV68141.1| DNA mismatch repair protein mutL [Deinococcus maricopensis DSM 21211] Length = 556 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 149/595 (25%), Positives = 258/595 (43%), Gaps = 69/595 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L + QIAAGE++ RP ++EL++N+LDA ++R+E + GGG ++ DNG Sbjct: 1 MTIRILPPDVARQIAAGEVVSRPLDVVRELLDNALDAGATRIEVEVEGGGLRAVRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ + E+P+A RH TSK+ + + T GFRGEAL ++ LTL +RP + Sbjct: 61 AGIPAGEVPLAPLRHATSKL-EAVDRVTTLGFRGEALWAMSQAGTLTLTTRPAAQVGATE 119 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + + VR V+ GT V V DLF +PAR S E IT ++ R + +P Sbjct: 120 LVACADDV-QVRRVSAPAGTSVAVTDLFAHLPARRRTQASAATEAREITGLVTRYVLHHP 178 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +S+ + ++ Q G+ ++ V G N V ++ + G P Sbjct: 179 GLSWRLTVDG----EVRVQHAPGDARAAVASVYGSLSANRVVRVDAT----GVTGVISRP 230 Query: 241 TFNRGNANQFYVFINGRTVQDKFI-LSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R ++ +V +NGR V I Y E +P P+ VL + + P V+ NV Sbjct: 231 ELTRARRDRMHVSVNGRPVLAPPELERAIIHGYGELLPGSLAPLCVLDVRVPPEDVNPNV 290 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ + + + + ++++ A+ + ++ + + + A P Sbjct: 291 HPAKAVVALADVDGVARRVTEAVRAALAQHPLARALPDLRLPQPPAPRAAAADGTFPP-- 348 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 Y++ Sbjct: 349 -----------------------------------------------LTFSGVFAGLYLL 361 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ L +VD HAAHER+++E++ F++ + PE++ L + A + + D Sbjct: 362 AEGDGDLWVVDAHAAHERVLYERLSAAFDAAEAFELP--EPELLQLTPEQAARLAGTEAD 419 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L G+ E FG +R +PA L+ +P+L +I+ + + D +LA Sbjct: 420 LRAFGLHVEAFGAGLARLRALPAALAHLPVPRLHEQVIEAALGT------HDPRREVLAR 473 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC ++++G + LL E+ C HGRPT ++L D+ FGR Sbjct: 474 LACAPALKAGM-LTEERGPSLLAELAGCAQPWACPHGRPTVLRLSERDLAHAFGR 527 >gi|213583595|ref|ZP_03365421.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 452 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 132/372 (35%), Positives = 200/372 (53%), Gaps = 4/372 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHPAK +RF ++ +FI Q + + ++ +T + +N Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRN 360 Query: 357 KYATSLTNTQEK 368 +A T + Sbjct: 361 HFAVPAEPTAAR 372 >gi|15594556|ref|NP_212345.1| DNA mismatch repair protein (mutL) [Borrelia burgdorferi B31] gi|216264252|ref|ZP_03436244.1| DNA mismatch repair protein MutL [Borrelia burgdorferi 156a] gi|223889249|ref|ZP_03623837.1| DNA mismatch repair protein MutL [Borrelia burgdorferi 64b] gi|8928214|sp|O51229|MUTL_BORBU RecName: Full=DNA mismatch repair protein mutL gi|2688099|gb|AAC66594.1| DNA mismatch repair protein (mutL) [Borrelia burgdorferi B31] gi|215980725|gb|EEC21532.1| DNA mismatch repair protein MutL [Borrelia burgdorferi 156a] gi|223885282|gb|EEF56384.1| DNA mismatch repair protein MutL [Borrelia burgdorferi 64b] Length = 610 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 150/622 (24%), Positives = 270/622 (43%), Gaps = 44/622 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLEEGGIQKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTSNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV+V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIEKCFKKQPAINGTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN + ++ + I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFRVLKKEHDNIKIEIFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ + G +P+ L LEI+P +D N Sbjct: 238 PDNFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSRILSPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ--DNAPKTHLP 356 VHP K +RF N + I +I +K + ++ K+ ++ + + Sbjct: 298 VHPQKKEVRFYNLPFLFKLISDNINNFFDKNINNYQDIIIKRQLTEDDHLIEMTNQPENF 357 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG--------- 407 + Q E+ N + N ++ +G Sbjct: 358 NKINTYDIPQNNNLETEDVNEPNKNTTQSNIDLRRYNSIIQNRPTLRENIGNIFSDNFLE 417 Query: 408 ---------------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 FEEPPNKNEKEEIKFNYIGQIFSEFLIVEKINEIYFIDQHAVHEKIIYEKLR---NSKKN 474 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 + L+ E + + +I E+ ++ I + GP + IP I S+ Sbjct: 475 VQKLLVPIEFTVVDKNIEEIIDSEIEEYKQMDIIISKIGPKKYQLESIPNICSQYE---- 530 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + + S + T+ ++ AT+AC +++ + + L+ E K Sbjct: 531 --NTLINFFQSRRSRTINSLESDLYATIACRKAVKRNDMLSAEFSKFLINEFFKLE-IKH 587 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 CPHGRKIYYKISKFELEKKVDR 609 >gi|219684595|ref|ZP_03539538.1| DNA mismatch repair protein MutL [Borrelia garinii PBr] gi|219671957|gb|EED29011.1| DNA mismatch repair protein MutL [Borrelia garinii PBr] Length = 611 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 151/623 (24%), Positives = 273/623 (43%), Gaps = 45/623 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLEEGGIHKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTGNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIKKCFKKQPAINGTIVNVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN ++ ++ I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFKVLKKEHENIKIELFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ I G +P+ L LEI+P +D N Sbjct: 238 PANFSKKSKRYIKTFVNRRPIDQKDLLEAITNGHSRIISPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--------FHQDNA 350 VHP K +RF N + I +I +K + + ++ K+ ++ N Sbjct: 298 VHPQKKEVRFFNLPFLFKLISDNINNFFDKDINNYNEIVIKRQLTDDDNLIKIINQPKNL 357 Query: 351 PKTHLPKYATSLTNTQEKLFLQ-------------------ENRLSTNDLLPSDDPTYSE 391 +T+ + E + +NR S + + + Sbjct: 358 NQTNTYDITQNKNLETEHTVNELSKNIIQNDIGLKRYNSIIQNRPSFKENITNIFSDDFL 417 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 + + QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 AFEEPQNKNEKEEIKFNYIGQIFSEFLIVEKVNEIYFIDQHAVHEKIIYEKLR---NSKK 474 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + L+ E + + +I E+ ++ I + GP + IP I ++ Sbjct: 475 TVQKLLIPIEFTIVDKNIEEIIDSEIEEYKKMDIIISKIGPKKYQLESIPNICNQYE--- 531 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 + + S + T+ ++ AT+AC ++++ + L+ E K Sbjct: 532 ---NTLINFFQSRKSRTINSLESDLYATIACRKAVKTNDILSLEFSKFLIDEFFKLE-IK 587 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 HCPHGRKIYYKISKFELEKKVAR 610 >gi|225548557|ref|ZP_03769605.1| DNA mismatch repair protein MutL [Borrelia burgdorferi 94a] gi|225370820|gb|EEH00255.1| DNA mismatch repair protein MutL [Borrelia burgdorferi 94a] Length = 610 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 150/622 (24%), Positives = 270/622 (43%), Gaps = 44/622 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLEEGGIQKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTSNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV+V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIEKCFKKQPAINGTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN + ++ + I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFRVLKKEHDNIKIEIFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ + G +P+ L LEI+P +D N Sbjct: 238 PDNFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSRILSPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ--DNAPKTHLP 356 VHP K +RF N + I +I +K + ++ K+ ++ + + Sbjct: 298 VHPQKKEVRFYNLPFLFKLISDNINNFFDKNINNYQDIIIKRQLTEDDHLIEMTNQPENF 357 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG--------- 407 + Q E+ N + N ++ +G Sbjct: 358 NKINTYDIPQNNNLETEDVNEPNKNTTQSNIDLKRYNSIIQNRPTLRENIGNIFSDNFLE 417 Query: 408 ---------------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 FEEPLNKNEKEEIKFNYIGQIFSEFLIVEKINEIYFIDQHAVHEKIIYEKLR---NSKKN 474 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 + L+ E + + +I E+ ++ I + GP + IP I S+ Sbjct: 475 VQKLLVPIEFTVVDKNIEEIIDSEIEEYKQMDIIISKIGPKKYQLESIPNICSQYE---- 530 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + + S + T+ ++ AT+AC +++ + + L+ E K Sbjct: 531 --NTLINFFQSRRSRTINSLESDLYATIACRKAVKRNDMLSAEFSKFLINEFFKLE-IKH 587 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 CPHGRKIYYKISKFELEKKVDR 609 >gi|269967709|ref|ZP_06181758.1| DNA mismatch repair protein [Vibrio alginolyticus 40B] gi|269827687|gb|EEZ81972.1| DNA mismatch repair protein [Vibrio alginolyticus 40B] Length = 670 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 127/397 (31%), Positives = 207/397 (52%), Gaps = 6/397 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ IKEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVIKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SRP Sbjct: 61 KGIAKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRPAAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMQVKLKPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + +RI+ V G F+ + + + + + L G+ Sbjct: 181 SRFDVTINVRHNGKIIRQYRAAKNQLQTEKRIAAVCGNAFVRHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGAKQQSDLQYCYVNGRMMRDKLINHAIRQSYEMSLKPDQFAAYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ A+ + + +++ S+FH+ ++ + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALTDALAQSAVIDKPQVNE---SAFHRVEPTESEEIE 357 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 ++ N QE + + D + Sbjct: 358 HSPEPENVQEPASSPVPERVYQAIESTPAYPGRSDYE 394 >gi|262045400|ref|ZP_06018423.1| DNA mismatch repair protein MutL [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037229|gb|EEW38477.1| DNA mismatch repair protein MutL [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 410 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 126/372 (33%), Positives = 200/372 (53%), Gaps = 4/372 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +V+ LTL SR + Sbjct: 61 SGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVARLTLTSRTAEQQEA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q ++ +V+P A GT +EV DLF+ PAR F+++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDQAVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ +A+ + + ++TL+G+ Sbjct: 181 ARFDVTINLSHNGKVMRQYRAVAQDGQRERRLGTICGAAFLEHALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 AEPLHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHPAK +RF ++ +FI Q + + ++ + + +N Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLDAPLAEKDDPPAPRPMPENRIAAGGN 360 Query: 357 KYATSLTNTQEK 368 ++A + Sbjct: 361 QFARPAEAREPA 372 >gi|226320952|ref|ZP_03796500.1| DNA mismatch repair protein MutL [Borrelia burgdorferi 29805] gi|226233654|gb|EEH32387.1| DNA mismatch repair protein MutL [Borrelia burgdorferi 29805] Length = 610 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 152/622 (24%), Positives = 268/622 (43%), Gaps = 44/622 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLEEGGIQKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTSNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV+V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIEKCFKKQPAINGTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN + ++ + I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFRVLKKEHDNIKIEIFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ + G +P+ L LEI+P +D N Sbjct: 238 PDNFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSRILSPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------SFHQDNAPK 352 VHP K +RF N + I +I +K + ++ K+ ++ Sbjct: 298 VHPQKKEVRFYNLPFLFKLISDNINNFFDKNINNYQDIIIKRQLTEDDHLIEMTNQPENF 357 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG----- 407 + Y N E + E +T S + E Sbjct: 358 NKINTYDIPQNNNLETEDVNEPSKNTTQSNIDLRRYNSIIQNRPTLRENIGNIFSDNFLE 417 Query: 408 ---------------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 FEEPLNKNEKEEIKFNYIGQIFSEFLIVEKINEIYFIDQHAVHEKIIYEKLR---NSKKN 474 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 + L+ E + + +I E+ ++ I + GP + IP I S+ Sbjct: 475 VQKLLVPIEFTVVDKNIEEIIDGEIEEYKQMDIIISKIGPKKYQLESIPNICSQYE---- 530 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + + S + T+ ++ AT+AC +++ + + L+ E K Sbjct: 531 --NTLINFFQSRRSRTINSLESDLYATIACRKAVKRNDMLSTEFSKFLINEFFKLE-IKH 587 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 CPHGRKIYYKISKFELEKKVDR 609 >gi|224532858|ref|ZP_03673473.1| DNA mismatch repair protein MutL [Borrelia burgdorferi WI91-23] gi|224512247|gb|EEF82633.1| DNA mismatch repair protein MutL [Borrelia burgdorferi WI91-23] Length = 610 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 150/622 (24%), Positives = 269/622 (43%), Gaps = 44/622 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLEEGGIQKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GINKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTSNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV+V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIEKCFKKQPAINGTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN + ++ + I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFRVLKKEHDNIKIEIFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ + G +P+ L LEI+P +D N Sbjct: 238 PDNFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSRILSPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ--DNAPKTHLP 356 VHP K +RF N + I +I +K + ++ K+ ++ + + Sbjct: 298 VHPQKKEVRFYNLPFLFKLISDNINNFFDKNINNYQDIIIKRQLTEDDHLIEMTNQPENF 357 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG--------- 407 + Q E+ N + N ++ +G Sbjct: 358 NKINTYDIPQNNTLETEDVNEPNKNTTQSNIDLRRYNSIIQNRPTLRENIGNIFSDNFLE 417 Query: 408 ---------------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 FEEPLNKNEKEEIKFNYIGQIFSEFLIVEKINEIYFIDQHAVHEKIIYEKLR---NSKKN 474 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 + L+ E + + +I E+ ++ I + GP + IP I S+ Sbjct: 475 VQKLLVPIEFTVVDKNIEEIIDSEIEEYKQMDIIISKIGPKKYQLESIPNICSQYE---- 530 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + + S + T+ ++ AT+AC +++ + + L+ E K Sbjct: 531 --NTLINFFQSRRSRTINSLESDLYATIACRKAVKRNDMLSAEFSKFLINEFFKLE-IKH 587 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 CPHGRKIYYKISKFELEKKVDR 609 >gi|312148297|gb|ADQ30956.1| DNA mismatch repair protein MutL [Borrelia burgdorferi JD1] Length = 610 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 149/622 (23%), Positives = 269/622 (43%), Gaps = 44/622 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLEEGGIQKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTSNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + TIV+V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIEKCFKKQPAINRTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN + ++ + I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFRVLKKEHDNIKIEIFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ + G +P+ L LEI+P +D N Sbjct: 238 PDNFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSRILSPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ--DNAPKTHLP 356 VHP K +RF N + I +I +K + ++ K+ ++ + + Sbjct: 298 VHPQKKEVRFYNLPFLFKLISDNINNFFDKNINNYQDIIIKRQLTEDDHLIEMTNQPENF 357 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG--------- 407 + Q E+ N + N ++ +G Sbjct: 358 NKINTYDIPQNNNLETEDVNEPNKNTTQSNIDLKRYNSIIQNRPTLRENIGNIFSDNFLE 417 Query: 408 ---------------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 FEEPLNKNEKEEIKFNYIGQIFSEFLIVEKINEIYFIDQHAVHEKIIYEKLR---NSKKN 474 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 + L+ E + + +I E+ ++ I + GP + IP I S+ Sbjct: 475 VQKLLVPIEFTVVDKNIEEIIDSEIEEYKQMDIIISKIGPKKYQLESIPNICSQYE---- 530 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + + S + T+ ++ AT+AC +++ + + L+ E K Sbjct: 531 --NTLINFFQSRRSRTINSLESDLYATIACRKAVKRNDMLSAEFSKFLINEFFKLE-IKH 587 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 CPHGRKIYYKISKFELEKKVDR 609 >gi|33151911|ref|NP_873264.1| DNA mismatch repair protein [Haemophilus ducreyi 35000HP] gi|71151978|sp|Q7VN43|MUTL_HAEDU RecName: Full=DNA mismatch repair protein mutL gi|33148132|gb|AAP95653.1| DNA mismatch repair protein MutL [Haemophilus ducreyi 35000HP] Length = 598 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 147/528 (27%), Positives = 254/528 (48%), Gaps = 35/528 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++ ++ I GG ++ DNG G Sbjct: 6 IHILPPQLANQIAAGEVVERPASVVKELVENSLDAGANHIQIDIEKGGAQLIRLRDNGCG 65 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A+ RH TSKI+ D I + GFRGEAL SI +VS LTL SR Q Sbjct: 66 IAKQDLTLALTRHATSKIATLADLEMILSLGFRGEALASISSVSRLTLTSRTANQTEAWQ 125 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G +++ ++P + GT +EV +LFF PAR FL++++ E N I +V+RR+A+A Sbjct: 126 AYTQGREMNVEIQPASHPVGTTIEVANLFFNTPARRKFLRTDKTEFNHIDEVVRRIALAK 185 Query: 180 PKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P +SFT + + + +R++ + G F+ A + + ++ L G+ Sbjct: 186 PTISFTLTHNGKIIRQYRKVADQSVAQQQKRVAAICGNHFLQQATHIEWQHGDLHLYGWV 245 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R + Y ++NGR ++DK I +R AYAE IP G P +L L+++P ++DV Sbjct: 246 SSPQLARPQNDLSYSYVNGRVMRDKIINHAVRQAYAELIPTGDQPAFILFLDLNPTELDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI-------------SS 344 NVHPAK +RF +I FI+Q +Q A+ + T + + ++ Sbjct: 306 NVHPAKHEVRFHQARLIHGFILQGVQNALQAQLALTPTDNQTDSVAETKACYTADNNRAA 365 Query: 345 FHQDNAPKTHLPKYA---TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED-----NDPV 396 + T P+Y+ T T ++ + + ND Y+E + Sbjct: 366 AGSNIFSSTPYPRYSGATNRPTKTAQQCYAELINTDKNDNANVAPIIYAEPLTTQATPAI 425 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 E+ + A + ++ + + +V +++ + + SQ Sbjct: 426 TETADPYPHHSQVLALVENKALLLKEQEHFYVVPLK------KLAQLQLTLSLAEKKSQP 479 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAER---FGPNAIAIREIP 501 LL P + L + + ++ L G + ++ G ++I +P Sbjct: 480 LLIPLSLSLDQAQAERWQQYQAQLLDSGFEIKQKHWQGQTRLSIIAVP 527 >gi|212633661|ref|YP_002310186.1| DNA mismatch repair protein [Shewanella piezotolerans WP3] gi|226723041|sp|B8CIX3|MUTL_SHEPW RecName: Full=DNA mismatch repair protein mutL gi|212555145|gb|ACJ27599.1| DNA mismatch repair protein [Shewanella piezotolerans WP3] Length = 620 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 162/562 (28%), Positives = 261/562 (46%), Gaps = 46/562 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I KL ++ NQIAAGE++ERP+ IKEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MAIEKLPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIDKGGSKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 FG+ +++ +A+ RH TSK+ DD I +FGFRGEAL SI +VS LTL SR Sbjct: 61 FGIPKQDLSLALSRHATSKLKSLDDLEAIMSFGFRGEALASISSVSRLTLTSRTETQAEA 120 Query: 119 AQIAISGEKISSVR-PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G +++ P A GT +E DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAKAEGTEMAVQILPAAHPVGTTIEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT + T + +R+ QV G+ F + ++ N++TL GY Sbjct: 181 VRRDIHFTLKHNGKSVRNYRPAMTEIQYLQRLGQVCGKAFAETCLHISCSHNDLTLSGYL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P G Y ++NGR V+D+ + +R A++E G P VL+LE+DP QVDV Sbjct: 241 QAPGAASGYCETQYFYVNGRLVKDRLVNHAVRQAFSEY-AAGVSPGYVLMLELDPHQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK---GISTSSVLSKKMISSFHQDN----- 349 NVHPAK +RF + ++I+Q++Q A+ + G+ + + ++F ++ Sbjct: 300 NVHPAKHEVRFHQSRYVHDYILQALQSAMAQSSELGLEAQPEPTDESGAAFESNSTNSNV 359 Query: 350 -------------------------APKTHLPKYATSLTNTQEKLFLQENRLSTND---- 380 + Y T L + ++ S+ + Sbjct: 360 SSTSYSEPNTKPVAVNERPLTTTATSYNQGQSSYRTPLRPATHRADVELPSQSSLEAYAS 419 Query: 381 -LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 L S S + A A + Y + D + ++ A + Sbjct: 420 LLSRSSAEPASGKVVSNPHASAVSDASVKMPAVLADKYWVIVEEDSIRLLSI-ADVIKET 478 Query: 440 FEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE-RFGPNAIAIR 498 + Q + + Q LL P + + + +I + L +LGI+ R G + I+ Sbjct: 479 ARQQIQAKLAQGLVGQPLLMPVAVPVDDNWNEVIETREILLRKLGIELSIRLGQ--LIIK 536 Query: 499 EIPAILSKKNIPQLLRDIIDEI 520 ++P L + L+ +++ I Sbjct: 537 KVPPYLRDSQLAVLIPELLQWI 558 >gi|225551982|ref|ZP_03772922.1| DNA mismatch repair protein MutL [Borrelia sp. SV1] gi|225370980|gb|EEH00410.1| DNA mismatch repair protein MutL [Borrelia sp. SV1] Length = 611 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 153/623 (24%), Positives = 276/623 (44%), Gaps = 45/623 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLEEGGIHKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTSNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV+V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIEKCFKKQPAINGTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN + ++ + I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFRVLKKEHDNIKIEIFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I + + G +P+ L LEI+P +D N Sbjct: 238 PDNFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHRRILSPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS--------------- 343 VHP K +RF N + I +I +K + ++ K+ ++ Sbjct: 298 VHPQKKEVRFYNLPFLFKLISDNINNFFDKNINNYQDIIIKRQLTEDDHLIEMTNQPENF 357 Query: 344 ------SFHQDNAPKTHLPKYATSLTNTQEKLFLQ------ENRLSTNDLLPSDDPTYSE 391 Q+N +T + TQ + L+ +NR + + + + Sbjct: 358 NEIKTYDIPQNNNLETEGNVSEPNKNITQSNIDLRRYNSIIQNRPTLRENIGNIFSDNFL 417 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 +++ QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 ESEEPPNKNEKEEIKFNYIGQIFSEFLIVEKINEIYFIDQHAVHEKIIYEKLR---NSKK 474 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 I + L+ E + + +I E+ ++ I + G + IP I S+ Sbjct: 475 IVQKLLVPIEFTVVDKNIEEIIDSEIEEYKQMDIIISKIGSKKYQLESIPNICSQYE--- 531 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 + + S + T+ ++ AT+AC +++ + L+ E K Sbjct: 532 ---NTLINFFQSRRSRTINSLESDLYATIACRKAVKRNDMLSVEFSKFLINEFFKLE-IK 587 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 HCPHGRKIYYKISKFELEKKVDR 610 >gi|269961400|ref|ZP_06175764.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833777|gb|EEZ87872.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 672 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 125/381 (32%), Positives = 201/381 (52%), Gaps = 9/381 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LT+ SRP Sbjct: 61 KGIVKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTMTSRPAAQEQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMKVKLQPTAHPIGTSVEVLDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + +RI+ V G F+ N + + + + L G+ Sbjct: 181 SRFDVTINVRHNGKMIRQYRAAKNQLQTEKRIAAVCGNAFVRNMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLKPDQFAAYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINK------KGISTSSVLSKKMISSFHQDNAP 351 NVHPAK +RF ++ +FI Q++ A+ + ++ S+ + SF A Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALADALAQSSVIDKPHVNESAFHHADPVESFEASTAN 360 Query: 352 KTHLPKYATSLTNTQEKLFLQ 372 + + + + E ++ Sbjct: 361 QEPVSAPEPANSPVPEHVYQA 381 >gi|325474471|gb|EGC77658.1| DNA mismatch repair protein [Treponema denticola F0402] Length = 606 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 138/619 (22%), Positives = 265/619 (42%), Gaps = 45/619 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++ LS++ ++IAAGE+IERP+ ++EL++NS+DA +S++ I GG S +++D+G Sbjct: 6 PVKLLSKETASKIAAGEVIERPASVVRELLDNSIDAGASQIIVEIEEGGISSIRVSDDGC 65 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E++ + H TSKI ++D ++ + GFRGEAL S+ AVS L + S + Sbjct: 66 GMTREDLELCTHTHSTSKIEEAEDLLHLRSLGFRGEALSSVQAVSSLEITS-TREGPAAW 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ + + P +N GT VEV++LF PAR FLK Q E A+ + Sbjct: 125 KLS-----LGKISPARLNKGTTVEVKNLFENFPARKKFLKRPQYEAAQCRQTFVEKALPH 179 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + + N+ + S+ I+ + ++ E+N++ + + + G Sbjct: 180 YNIEMRYIADGINKLILPAHSSLK--ERCIAAMSLKEPEELFYEINQEGDGFSFKAVLGS 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + Y+F+NGR + + ++ + A P G +P + L +DP +VD N+ Sbjct: 238 PAVVCSDKRNIYIFVNGRRINEYGLVQAVCYASEGYFPNGGFPAAFVFLNVDPERVDFNI 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST----------------------SSVL 337 HPAK +F + I + + +I +K +S ++ L Sbjct: 298 HPAKREAKFEDYKEIHHSLSSTISSFYKQKTVSDLLKESYQPEYTRGFDFEKTEYEAADL 357 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ--ENRLSTNDLLPSDDPTYSEDNDP 395 ++ + + S ++ E + ++ + + + Sbjct: 358 NQSYNPAGTKKYLQSNTFDYRQNSTKTYWPSSPIKQIEASTAFQEVSAAQHRLSAAAYET 417 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 + Q +I + + L I+DQHAAHER++FE ++ S + + Sbjct: 418 SALPQDLPKSDFKFLGQFCGTFIAVEKNNALYIIDQHAAHERILFEGLK---KSLGPSQE 474 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 L+ I E + +I + +L + G IR +P + + + L++ Sbjct: 475 LLIPYRIETESEKDDEIIRLNLHELQKAGFNISEDKKGLWIIRAVP--IRWQGTEKDLKE 532 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 + + +ILA AC + + G + + + + P C H Sbjct: 533 DLA-----GAGKDPSGLMHHILARSACRAACKDGDIIDPVSAYNIAVKTFALPEPL-CPH 586 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRP + + +++ K R Sbjct: 587 GRPLYFIIDRTELFKRIKR 605 >gi|292491935|ref|YP_003527374.1| DNA mismatch repair protein MutL [Nitrosococcus halophilus Nc4] gi|291580530|gb|ADE14987.1| DNA mismatch repair protein MutL [Nitrosococcus halophilus Nc4] Length = 527 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 158/596 (26%), Positives = 267/596 (44%), Gaps = 84/596 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR LS ++ IAAGE++ RP+ +KEL+EN+LD + V + GG+ Q+ D+G Sbjct: 1 MTIRILSPQVQQCIAAGEVVARPASVLKELMENALDGGAETVRVKVQEGGRRLIQVIDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ + E+P+A +R TSKI +D + + +FGFRGEAL SI +VS L L+SR G Sbjct: 61 SGLAATEVPLAFERFATSKIVQMEDLAAVRSFGFRGEALGSIASVSRLRLLSREKGTLLG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + G ++ S++ + + GT VEV DLF+ PAR FL+S + E I + R A+A Sbjct: 121 TEARLEGGRMLSLQEMGASVGTRVEVWDLFYNTPARQKFLRSLRTEYGHILNTFTRFALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P+ FT + + + + +RI+ ++G+ + E + + L G+ Sbjct: 181 FPEKHFTLTMDGRELHVLPPATRV----DRITALLGQQAAAHLEEFHATGSWGRLGGFVI 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + Y+F+N R V++ + IR E V+L L+I P QVDVN Sbjct: 237 PTEA--RGRSPLYLFVNRRPVRNVALYRAIRDGLQEAGST-----VLLFLDIHPSQVDVN 289 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK + L +++ S+ Q P + Sbjct: 290 VHPAK-----------------------AEVRFRDEQALYEQVRSALKQRTLPWQTQNER 326 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 EES Q Q+ ++ Sbjct: 327 VAE-----------------------------------EESTYGATQGFRLLGQVENTFL 351 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 ++ + + ++DQHAA ER+++E++ K+ + L+ P+++ L E A + H E Sbjct: 352 VTLSEGQIYLLDQHAAEERVLYERL----QQGKVQPRELVAPQVVTLSPEERAFVETHRE 407 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L G E GP A+A+R IP LS + ++ ++ + E+ Sbjct: 408 ALESCGFVVEPLGPQALALRAIPDFLSPPQSGLIFSRLL---------PRVRSQREDFQQ 458 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++C G+I++G + RLL + + C H RP + +L L ++ + GR Sbjct: 459 ALSCLGAIKAGESLAPEAQERLLNAWVQTDHPHACAHNRPVYFRLSLDEVRRKVGR 514 >gi|91227455|ref|ZP_01261819.1| DNA mismatch repair protein [Vibrio alginolyticus 12G01] gi|91188605|gb|EAS74896.1| DNA mismatch repair protein [Vibrio alginolyticus 12G01] Length = 670 Score = 372 bits (955), Expect = e-100, Method: Composition-based stats. Identities = 140/511 (27%), Positives = 232/511 (45%), Gaps = 38/511 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ IKEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVIKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SRP Sbjct: 61 KGIAKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRPAAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMQVKLKPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + +RI+ V G F+ + + + + + L G+ Sbjct: 181 SRFDVTINVRHNGKIIRQYRAAKNQLQTEKRIAAVCGNAFVRHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYEMSLKPDQFAAYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ A+++ + +++ S+FH+ ++ + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALTDALSQSAVIDKPQVNE---SAFHRVEPTESEEIE 357 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 ++ QE + + D + + Sbjct: 358 HSPEPEKVQEPASSPVPERVYQAIESTPAYPGRSDYEVKPRNSGPSET------------ 405 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKM-RQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 + E + E R D+ +K + + E + + Sbjct: 406 ---------------SVREARVVESFKRNDWVESKPAPKPSHSKERHVEPAPTKQEVRAY 450 Query: 477 DEDLHRLGIK---AERFGPNAIA-IREIPAI 503 E L L + P I +P+I Sbjct: 451 HELLKTLEFEAQAVTPIAPQTITSHTSMPSI 481 >gi|260361486|ref|ZP_05774537.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus K5030] gi|308111305|gb|EFO48845.1| DNA mismatch repair protein MutL [Vibrio parahaemolyticus K5030] Length = 580 Score = 372 bits (954), Expect = e-100, Method: Composition-based stats. Identities = 126/370 (34%), Positives = 197/370 (53%), Gaps = 5/370 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ IKEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVIKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SRP Sbjct: 61 KGIAKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRPAAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMQVKLQPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS + +RI+ V G F+ N + + + + L G+ Sbjct: 181 SRFDVSINVRHNGKVIRQYRAAKNQLQTEKRIAAVCGNAFVRNMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPDGARQQSDLQYCYVNGRMMRDKLINHAIRQSYEMSLKPDQFAAYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH--L 355 NVHPAK +RF ++ +FI Q++ A+ + + +++ + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALADALAQSSVIDKPQVNESAFHRAEPEERESQPETT 360 Query: 356 PKYATSLTNT 365 P+Y+ +T Sbjct: 361 PQYSPQSVST 370 >gi|221217522|ref|ZP_03588992.1| DNA mismatch repair protein MutL [Borrelia burgdorferi 72a] gi|221192585|gb|EEE18802.1| DNA mismatch repair protein MutL [Borrelia burgdorferi 72a] Length = 610 Score = 372 bits (954), Expect = e-100, Method: Composition-based stats. Identities = 150/622 (24%), Positives = 270/622 (43%), Gaps = 44/622 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLVEGGIQKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTSNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV+V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIEKCFKKQPAINGTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN + ++ + I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFRVLKKEHDNIKIEIFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ + G +P+ L LEI+P +D N Sbjct: 238 PDNFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSRILSPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ--DNAPKTHLP 356 VHP K +RF N + I +I +K + ++ K+ ++ + + Sbjct: 298 VHPQKKEVRFYNLPFLFKLISDNINNFFDKNINNYQDIIIKRQLTEDDHLIEMTNQPENF 357 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG--------- 407 + Q E+ N + N ++ +G Sbjct: 358 NKINTYDIPQNNNLETEDVNEPNKNTTQSNIDLRRYNSIIQNRPTLRENIGNIFSDNFLE 417 Query: 408 ---------------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 FEEPLNKNEKEEIKFNYIGQIFSEFLIVEKINEIYFIDQHAVHEKIIYEKLR---NSKKN 474 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 + L+ E + + +I E+ ++ I + GP + IP I S+ Sbjct: 475 VQKLLVPIEFTVVDKNIEEIIDSEIEEYKQMDIIISKIGPKKYQLESIPNICSQYE---- 530 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + + S + T+ ++ AT+AC +++ + + L+ E K Sbjct: 531 --NTLINFFQSRRSRTINSLESDLYATIACRKAVKRNDMLSAEFSKFLINEFFKLE-IKH 587 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 CPHGRKIYYKISKFELEKKVDR 609 >gi|226321529|ref|ZP_03797055.1| DNA mismatch repair protein MutL [Borrelia burgdorferi Bol26] gi|226232718|gb|EEH31471.1| DNA mismatch repair protein MutL [Borrelia burgdorferi Bol26] Length = 610 Score = 372 bits (954), Expect = e-100, Method: Composition-based stats. Identities = 150/622 (24%), Positives = 271/622 (43%), Gaps = 44/622 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLVEGGIQKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTSNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV+V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIEKCFKKQPAINGTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN + ++ + I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFRVLKKEHDNIKIEIFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ + G +P+ L LEI+P +D N Sbjct: 238 PDNFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSRILSPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ--DNAPKTHLP 356 VHP K +RF N + I +I +K + ++ K+ ++ + ++ Sbjct: 298 VHPQKKEVRFYNLPFLFKLISDNINNFFDKNINNYQDIIIKRQLTEDDHLIEMTNQSENF 357 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG--------- 407 + Q E+ N + N ++ +G Sbjct: 358 NKINTYDIPQNNNLETEDVNEPNKNTTQSNIDLRRYNSIIQNRPTLRENIGNIFSDNFLE 417 Query: 408 ---------------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 FEEPPNKNEKEEIKFNYIGQIFSEFLIVEKINEIYFIDQHAVHEKIIYEKLR---NSKKN 474 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 + L+ E + + +I E+ ++ I + GP + IP I S+ Sbjct: 475 VQKLLVPIEFTVVDKNIEEIIDSEIEEYKQMDIIISKIGPKKYQLESIPNICSQYE---- 530 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + + S + T+ ++ AT+AC +++ + + L+ E K Sbjct: 531 --NTLINFFQSRRSRTINSLESDLYATIACRKAVKRNDMLSAEFSKFLINEFFKLE-IKH 587 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 CPHGRKIYYKISKFELEKKVDR 609 >gi|195941942|ref|ZP_03087324.1| DNA mismatch repair protein (mutL) [Borrelia burgdorferi 80a] Length = 610 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 150/622 (24%), Positives = 270/622 (43%), Gaps = 44/622 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLVEGGIQKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTSNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV+V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIEKCFKKQPAINGTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN + ++ + I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFRVLKKEHDNIKIEIFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ + G +P+ L LEI+P +D N Sbjct: 238 PDNFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSRILSPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ--DNAPKTHLP 356 VHP K +RF N + I +I +K + ++ K+ ++ + + Sbjct: 298 VHPQKKEVRFYNLPFLFKLISDNINNFFDKNINNYQDIIIKRQLTEDDHLIEMTNQPENF 357 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG--------- 407 + Q E+ N + N ++ +G Sbjct: 358 NKINTYDIPQNNNLETEDVNEPNKNTTQSNIDLKRYNSIIQNRPTLRENIGNIFSDNFLE 417 Query: 408 ---------------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 FEEPLNKNEKEEIKFNYIGQIFSEFLIVEKINEIYFIDQHAVHEKIIYEKLR---NSKKN 474 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 + L+ E + + +I E+ ++ I + GP + IP I S+ Sbjct: 475 VQKLLVPIEFTVVDKNIEEIIDSEIEEYKQMDIIISKIGPKKYQLESIPNICSQYE---- 530 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + + S + T+ ++ AT+AC +++ + + L+ E K Sbjct: 531 --NTLINFFQSRRSRTINSLESDLYATIACRKAVKRNDMLSAEFSKFLINEFFKLE-IKH 587 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 CPHGRKIYYKISKFELEKKVDR 609 >gi|225549784|ref|ZP_03770748.1| DNA mismatch repair protein MutL [Borrelia burgdorferi 118a] gi|225369592|gb|EEG99041.1| DNA mismatch repair protein MutL [Borrelia burgdorferi 118a] Length = 610 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 150/622 (24%), Positives = 270/622 (43%), Gaps = 44/622 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLVEGGIQKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTSNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV+V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIEKCFKKQPAINGTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN + ++ + I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFRVLKKEHDNIKIEIFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ + G +P+ L LEI+P +D N Sbjct: 238 PDNFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSRILSPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ--DNAPKTHLP 356 VHP K +RF N + I +I +K + ++ K+ ++ + + Sbjct: 298 VHPQKKEVRFYNLPFLFKLISDNINNFFDKNINNYQDIIIKRQLTEDDHLIEMTNQPENF 357 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG--------- 407 + Q E+ N + N ++ +G Sbjct: 358 NKINTYDIPQNNNLETEDVNGPNKNTTQSNIDLKRYNSIIQNRPTLRENIGNIFSDNFLE 417 Query: 408 ---------------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 FEEPLNKNEKEEIKFNYIGQIFSEFLIVEKINEIYFIDQHAVHEKIIYEKLR---NSKKN 474 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 + L+ E + + +I E+ ++ I + GP + IP I S+ Sbjct: 475 VQKLLVPIEFTVVDKNIEEIIDSEIEEYKQMDIIISKIGPKKYQLESIPNICSQYE---- 530 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + + S + T+ ++ AT+AC +++ + + L+ E K Sbjct: 531 --NTLINFFQSRRSRTINSLESDLYATIACRKAVKRNDMLSAEFSKFLINEFFKLE-IKH 587 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 CPHGRKIYYKISKFELEKKVDR 609 >gi|330836375|ref|YP_004411016.1| DNA mismatch repair protein mutL [Spirochaeta coccoides DSM 17374] gi|329748278|gb|AEC01634.1| DNA mismatch repair protein mutL [Spirochaeta coccoides DSM 17374] Length = 626 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 147/638 (23%), Positives = 272/638 (42%), Gaps = 63/638 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++L + +IAAGE+IERPS ++ELI+N++DA ++ + I GG I DNG Sbjct: 6 RIKRLDPIVAQRIAAGEVIERPSSVVRELIDNAVDAGATTITVAIENGGLDLISIMDNGS 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ + H TSK++ DD ++ T GFRGEAL SI A S +T+ S + Sbjct: 66 GIAPDDLPLCCESHATSKVASVDDLYHLSTMGFRGEALYSIAACSRVTIASSWHGQSP-W 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + + P + GT V+V LF IPAR NF+K E V+ ++A+ Sbjct: 125 SMTVDNGRKEEPVPGGPSTGTKVDVEGLFKFIPARRNFMKRASAEAASCRAVMVEKSLAF 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + F S R + + ++ + +EL + + L Sbjct: 185 PSIEFRLLVDDSLRVHFPVTNRKERVLDALAT-DKNLVRSETMELTDHAGRFDLYAVCST 243 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ R + + V++N R ++D ++ + Y E +P G +P L + +DP D N+ Sbjct: 244 PSTFRSDRSHIKVYVNNRPIEDYALVQAVTYGYGEMLPGGSFPYCYLFISVDPELADFNI 303 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK------- 352 HPAK ++ RN I + I++ ++ + + ++ + + D P+ Sbjct: 304 HPAKREVKLRNKAEIHHQIVEMVRTQVRRTIPRLRGMMQEDHAADVQSDVQPELGASPRH 363 Query: 353 -------------------THLPKYATSLTNTQEKL-----------------FLQENRL 376 Y+ + ++ E L FLQ++ Sbjct: 364 QGERTADTHVASKHVTYGYGSASGYSPAPSSVAEALKNSGKPADFCWFEKARDFLQKSGT 423 Query: 377 STNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 S+ + +D E + + Q ++I++ L IVDQHAAHE Sbjct: 424 SSAVTIKADRTAADATTWIPENASEQDF---TYIGQAFSLFLIAEKDGDLYIVDQHAAHE 480 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R++++++ + K+ + P D+ + ++ GI+ R Sbjct: 481 RILYDEIVSRKDIQKL-----MVPLSFDVDGDVDEYLQQNSHLYAEYGIELTRPDERQWE 535 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 I +PA+ K + + + D I + + + + A +AC+ +IR G + + Sbjct: 536 IMTMPAL--GKPVEKQVVDFISH-----HCGDMTELDKGLYAIIACHSAIRDGDTLDKMA 588 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LR++ C HGR ++L ++ K GR Sbjct: 589 AEEILRKVFAMAEPR-CPHGRTFLVRLSQDELRKSVGR 625 >gi|224534080|ref|ZP_03674663.1| DNA mismatch repair protein MutL [Borrelia burgdorferi CA-11.2a] gi|224512779|gb|EEF83147.1| DNA mismatch repair protein MutL [Borrelia burgdorferi CA-11.2a] Length = 610 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 150/622 (24%), Positives = 270/622 (43%), Gaps = 44/622 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLVEGGIQKILIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GISKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTSNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV+V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIEKCFKKQPAINGTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN + ++ + I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFRVLKKEHDNIKIEIFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ + G +P+ L LEI+P +D N Sbjct: 238 PDKFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSRILSPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ--DNAPKTHLP 356 VHP K +RF N + I +I +K + ++ K+ ++ + + Sbjct: 298 VHPQKKEVRFYNLPFLFKLISDNINNFFDKNINNYQDIIIKRQLTEDDHLIEMTNQPENF 357 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG--------- 407 + Q E+ N + N ++ +G Sbjct: 358 NKINTYDIPQNNNLETEDVNEPNKNTTQSNIDLKRYNSIIQNRPTLRENIGNIFSDNFLE 417 Query: 408 ---------------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 FEEPLNKNEKEEIKFNYIGQIFSEFLIVEKINEIYFIDQHAVHEKIIYEKLR---NSKKN 474 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 + L+ E + + +I E+ ++ I + GP + IP I S+ Sbjct: 475 VQKLLVPIEFTVVDKNIEEIIDSEIEEYKQMDIIISKIGPKKYQLESIPNICSQYE---- 530 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + + S + T+ ++ AT+AC +++ + + L+ E K Sbjct: 531 --NTLINFFQSRRSRTINSLESDLYATIACRKAVKRNDMLSAEFSKFLINEFFKLE-IKH 587 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 CPHGRKIYYKISKFELEKKVDR 609 >gi|156972476|ref|YP_001443383.1| DNA mismatch repair protein [Vibrio harveyi ATCC BAA-1116] gi|156524070|gb|ABU69156.1| hypothetical protein VIBHAR_00096 [Vibrio harveyi ATCC BAA-1116] Length = 681 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 121/382 (31%), Positives = 199/382 (52%), Gaps = 3/382 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LT+ SRP Sbjct: 61 KGIVKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTMTSRPAAQEQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMKVKLQPTAHPIGTSVEVLDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + +RI+ V G F+ N + + + + L G+ Sbjct: 181 SRFDVTINVRHNGKMIRQYRAAKNQLQTEKRIAAVCGNAFVRNMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLKPDQFAAYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ A+ + + +++ + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALADALAQSSVIDKPHVNESAFHHADPAQPIEPFEAM 360 Query: 358 YATSLTNTQEKLFLQENRLSTN 379 + + + + + S++ Sbjct: 361 MSAPEAASLPEPVSKPEQASSS 382 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 99/261 (37%), Gaps = 23/261 (8%) Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + + P ++ + +++++ L T D P + + Sbjct: 421 RPADSFRRTDWVESKPAPKPSSNREQRHAESAPSKQEVRAYHELLQTPDFEPQKEAPKAS 480 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 + E + L A A + + +++ + G +V A ++ + Sbjct: 481 VSTSAEAALPPVTALSKALAVVDEQFVLMSSDSGAALVALPRAEFYRTKGQL--TPSDGS 538 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + +Q LL P + L L ++ +D +LGI+ + A+ + +P+ L ++N+ Sbjct: 539 LKAQPLLVPLSVKLEPELVELARDYQQDFAQLGIQLKARNDKALMVMGVPSPLRQQNLQN 598 Query: 512 LLRDIIDEII-----DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 L+ D++ + +T L + I+ + + +++S + E +++ E+E+ Sbjct: 599 LIPDLLSYAQTRVRGEVATVQLLSELIDWLALQV---TTVKSHYTLS--EAIQIIAELEQ 653 Query: 567 NPNSSQCNHGRPTFIKLKLSD 587 HG +L L D Sbjct: 654 LR------HG-----QLPLED 663 >gi|226326650|ref|ZP_03802168.1| hypothetical protein PROPEN_00500 [Proteus penneri ATCC 35198] gi|225204871|gb|EEG87225.1| hypothetical protein PROPEN_00500 [Proteus penneri ATCC 35198] Length = 670 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 154/597 (25%), Positives = 258/597 (43%), Gaps = 79/597 (13%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++ ++ I GG +I DNG Sbjct: 1 MAINLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATSIDIDIDKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ +A+ RH TSKIS DD I + GFRGEAL SI +VS L L SR Sbjct: 61 CGINRDDLKLALARHATSKISTLDDLEAIMSMGFRGEALASISSVSRLILTSRTQDQEEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +++P A G+ VEV DLF+ PAR FL++E+ E I +VIRR+A+ Sbjct: 121 WQAYAEGRDMAVTIKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFAHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + + R+S + G +F+N +++L+ + ++ ++G+ Sbjct: 181 SRFDVTINLTHNGKRVRQYRAVKDESQQNRRLSAICGNNFVNQSMQLSWEHGDLAIKGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P ++ Y ++NGR ++D+ I IR AY + + P +L L +DP QVDV Sbjct: 241 EHPLSPVQSSEIQYCYVNGRMMRDRLINHAIRQAYEGYLQGEQQPSYILYLSVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQ-------------------------SIQKAINKKGIS 332 NVHPAK +RF ++ +FI Q + + ++ Sbjct: 301 NVHPAKHEVRFHESRLVHDFIYQGVLSVLRQATQEPLSLASDDEEEHETALNFPENRQVA 360 Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQE----------KLFLQENRLSTNDLL 382 +V S+ + Q + ++ +Y+ N+ + E+ T L Sbjct: 361 GENVFSQPYQAPIAQTPSNRSSSHQYSEREHNSNSHQKQASQFGGRHQFGESYQRTQGAL 420 Query: 383 PSDDPTYS-------------------------EDNDPVEESE-------------ATHY 404 S + +EE T Y Sbjct: 421 YQKMMQESVSTSKDKEKIPLFPERAPLNLGEIVHTTNNIEEDTISVMPRSVNAKDGQTDY 480 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 G A Y + +++ GL ++ A L ++ + Q LL P + Sbjct: 481 TFGRVLAIYQHKYALIESSQGLGLLSLEEADFLLKCAQLLP--KDETLKPQPLLVPLKLA 538 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 L + E ++ + + GI E I + L ++N+P LL + + Sbjct: 539 LSKEEISVFNQFQSLISHFGIVIE-ISHGKATIHAVSLPLRQQNLPVLLTALFAYLS 594 >gi|227357130|ref|ZP_03841499.1| DNA mismatch repair protein [Proteus mirabilis ATCC 29906] gi|227162662|gb|EEI47629.1| DNA mismatch repair protein [Proteus mirabilis ATCC 29906] Length = 669 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 134/418 (32%), Positives = 212/418 (50%), Gaps = 10/418 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++ ++ I GG +I DNG Sbjct: 1 MAINLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATTIDIDIDKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +++ +A+ RH TSKIS DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 CGISRDDLKLALARHATSKISTLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQEEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A G+ VEV DLF+ PAR FL++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMTVAVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS + + R+S + G F++ A++L + ++ ++G+ Sbjct: 181 SRFDVSINLTHNGKRVRQYRAAKETHQHHRRLSAICGNHFVDQAMQLTWEHGDLAIKGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P ++ Y ++NGR ++D+ I IR AY + + P VL L +DP QVDV Sbjct: 241 EHPLAPVQSSEIQYCYVNGRMMRDRLINHAIRQAYEGYLQGEQQPSYVLYLTVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS-------VLSKKMISSFHQDNA 350 NVHPAK +RF ++ +FI Q++ + + T S L+ Q Sbjct: 301 NVHPAKHEVRFHESRLVHDFIYQAVLSVLRQVTEDTLSLDEEDNGALTATTFPENRQVAG 360 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 Y +T++ +K + S L + + D + E+ G+ Sbjct: 361 ENVFSQPYQAPVTSSTQKKSTGAYQGSAGKGLTDTQKSPQKTLDTRQFGESYQRTQGM 418 >gi|307718363|ref|YP_003873895.1| DNA mismatch repair protein MutL [Spirochaeta thermophila DSM 6192] gi|306532088|gb|ADN01622.1| DNA mismatch repair protein MutL [Spirochaeta thermophila DSM 6192] Length = 573 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 146/596 (24%), Positives = 264/596 (44%), Gaps = 38/596 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E + +IAAGE+I++P+ ++EL++N+LDA +S + IA GG + DNG Sbjct: 11 RINLLEEAVFRKIAAGEVIDKPAAVVRELLDNALDAAASEITVEIAQGGMERILVLDNGE 70 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E++ H TSKI D + T GFRGEAL SI AV+ + SR +G Sbjct: 71 GMVPEDVRRCYLPHATSKIRSEQDLLAVTTLGFRGEALGSIAAVATTRIASRARGTPSGY 130 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + ++ + GT VEV+ LF + PAR FLK+ E L ++ A+ + Sbjct: 131 FVLVDRGRLVEEGETHLPEGTRVEVQRLFSSFPARKRFLKNPSTEGLLCRRMVVEKALPF 190 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE-KSNEITLQGYTG 238 P+V+F F + + + R+ + + F +A E E + + + ++G Sbjct: 191 PRVAFRFVKDGGMEFYLPP----QDLLARVCAALPDLFKPSASEYFEVEQDGVRMEGVLL 246 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P F + + +++N R VQ+ + + Y +P G+YP V+ + + P +VD N Sbjct: 247 SPAFPQRDRRHIRIYLNRRLVQEFSLAQAVAYGYRGVLPGGQYPAAVIFITLPPERVDFN 306 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK + R + + + +++++A+ + + + P Sbjct: 307 VHPAKREAKIRGLSSLHALLARAVEQALKDWIGVRRIAPTPGRPETVGETERVYHPYPDP 366 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 + R T +L T++ D + Q ++ Sbjct: 367 S---------------RSGTGELFTGPAHTFTLPADSGPPPSPRTGEGFTYLGQAFGVFL 411 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + + L++VDQHAAHER+++ ++R +S ++ L P + E A + E E Sbjct: 412 VVEREGTLLLVDQHAAHERILYNRLRSHPSSQEL-----LFPYAFPVDADEAARLEEARE 466 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 + LGI+ + +PA L + P ++ + L+D + A Sbjct: 467 ETAALGIRF-VLEEGRCTLTHLPAPL--SDAPHVVAQWL-------KGERLEDPERDAYA 516 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 T+AC G+I+ G + + LL + C HGRP ++++ ++ + R Sbjct: 517 TLACRGAIKEGEVVDRLTALDLLSQTFSLEEPF-CPHGRPLWVEITREELFRRIRR 571 >gi|167625542|ref|YP_001675836.1| DNA mismatch repair protein [Shewanella halifaxensis HAW-EB4] gi|189030412|sp|B0TU66|MUTL_SHEHH RecName: Full=DNA mismatch repair protein mutL gi|167355564|gb|ABZ78177.1| DNA mismatch repair protein MutL [Shewanella halifaxensis HAW-EB4] Length = 637 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 161/578 (27%), Positives = 264/578 (45%), Gaps = 60/578 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I KL ++ NQIAAGE++ERP+ IKEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MAIEKLPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIEKGGSKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++ +A+ RH TSK+ DD I +FGFRGEAL SI +VS L L SR + Sbjct: 61 SGIPKADLCLALSRHATSKLKSLDDLEAILSFGFRGEALASISSVSRLILTSRTAEQAEA 120 Query: 119 AQIAISGEKISSVR-PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G +++ P A G+ VE DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAHAEGTEMAVKVLPAAHPVGSTVEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A + FT +T + +R++ V G+ F + + + N+++L GY Sbjct: 181 ARRDIHFTLKHNGKTVRNYRPANTESQYIQRLALVCGKAFAETCLRIECQHNDLSLSGYL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P+ G + Y ++NGR V+D+ + +R A+A+ G P VL+L++DP QVDV Sbjct: 241 QSPSSANGYSETQYFYVNGRLVKDRLVNHAVRQAFAQY-AEGVSPGYVLMLDLDPHQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ--DNAPKTHL 355 NVHPAK +RF + +FI+Q++Q AI++ + + S Q Sbjct: 300 NVHPAKHEVRFHQSRYVHDFILQALQSAISQSMELALNNEPEIQQSPDRQVSPTRGAVTA 359 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND--------------------- 394 P Y+ S+ + + S + + S + Sbjct: 360 PLYSESIERKPSVSYDVRDSHSVTNQRDYSSGSSSYRSPLKPSARNGDVSLPSQSSIRAY 419 Query: 395 ----PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH-------ERLIFEK- 442 + S ++ + + +GL + HAA E + + Sbjct: 420 GELLSTQSSSTHSDRVLSTQQNNYAVRSPAGNQNGLAASNSHAASMPAVIAGEFWVLVRD 479 Query: 443 ---------------MRQDFN---STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 ++ + S + Q LL P + + + A+I ++ L +LG Sbjct: 480 DKISLLSISMVARAVLKAEIAAKFSQGLVGQPLLMPVAVAVDDDWLAIIENREQLLRKLG 539 Query: 485 IKAE-RFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 I+ R G + I+++P L + L+ +++ I Sbjct: 540 IELSIRLGQ--LIIKKVPPYLRNSQLAVLIPELLQWIQ 575 >gi|127511498|ref|YP_001092695.1| DNA mismatch repair protein MutL [Shewanella loihica PV-4] gi|189030413|sp|A3QAD8|MUTL_SHELP RecName: Full=DNA mismatch repair protein mutL gi|126636793|gb|ABO22436.1| DNA mismatch repair protein MutL [Shewanella loihica PV-4] Length = 631 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 159/582 (27%), Positives = 265/582 (45%), Gaps = 56/582 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ IKEL+ENSLDA ++RV+ I GG +ITDNG Sbjct: 1 MTIRILPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIEIDKGGSKLIKITDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSK++ DD I +FGFRGEAL SI +VS LTL SR + + Sbjct: 61 SGIPKEELSLALSRHATSKLASLDDLDAILSFGFRGEALASISSVSRLTLTSRTQEQSEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ V P A G+ VE DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAYAEGSEMAVRVIPAAHPVGSTVEAADLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++ FT T + +R++QV G+ F +NA+ ++ N ++L GY Sbjct: 181 VRSEIHFTLKHNGKQVRNYRPAKTEAQYLQRLAQVSGKAFADNALRVDCNHNGLSLSGYI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + Y ++NGR V+D+ + +R A+A+ + G VL+L +DP QVDV Sbjct: 241 QSPFSEMAVGDTQYFYVNGRLVRDRLVNHAVRQAFAQQL-QGEQVAFVLMLNLDPHQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK-------GISTSSVLSKKMISSFHQDNA 350 NVHPAK +RF + +FI+Q+++ A+ + + T + S Sbjct: 300 NVHPAKHEVRFHESRYVHDFILQALESALRQSSELAFEAALDTQVTDQNRSASYIRPLQT 359 Query: 351 PKTHLPKYATSLTNTQEKLFL-----------QENRLSTNDLLPSDDPTYSEDNDPVEES 399 ++ + +T+E + +R + + + Sbjct: 360 QQSDTGSNQIAHGDTEENALWLANERPAYGEREASRQAGGQRVQETQMSSYGSGQSGGRG 419 Query: 400 EATHYQLGIACAQIHQNYI---------------------ISQTTDGLVIVDQH------ 432 + + A + + Q DG + Sbjct: 420 RSYASTELPSQAAVDSYAQLMTTPGVSSQANQADDSHLPPMPQVLDGQYWLLVRGSELAL 479 Query: 433 ---AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE- 488 + R + + + + Q LL P + + E ++E + + +LG++ Sbjct: 480 LSLSCAAREVTRREIEAKLDAGLIGQPLLMPVSVKVDEDWQQTLVERELLVRKLGLELTI 539 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEII-DSSTTYTL 529 R G + I+++P L + + ++ + + I + TT L Sbjct: 540 RLGQ--LIIKKVPPYLRQSQLASVIPEFLQWIRFEEPTTEAL 579 >gi|262393031|ref|YP_003284885.1| DNA mismatch repair protein MutL [Vibrio sp. Ex25] gi|262336625|gb|ACY50420.1| DNA mismatch repair protein MutL [Vibrio sp. Ex25] Length = 670 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 127/397 (31%), Positives = 206/397 (51%), Gaps = 6/397 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ IKEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVIKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SRP Sbjct: 61 KGIAKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRPAVQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMQVKLKPAAHPIGTTVEVLDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + +RI+ V G F+ + + + + + L G+ Sbjct: 181 SRFDVTINVRHNGKIIRQYRAAKNQLQTEKRIAAVCGNAFVRHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYEMSLKPDQFAAYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ A+ + + +++ S+FH+ ++ + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALADALAQSAVIDKPQVNE---SAFHRVEPTESEEVE 357 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 ++ QE + + D + Sbjct: 358 HSPEPEKVQEPASSPVPERVYQAIESTPAYPGRSDYE 394 >gi|197287175|ref|YP_002153047.1| DNA mismatch repair protein [Proteus mirabilis HI4320] gi|238690089|sp|B4F203|MUTL_PROMH RecName: Full=DNA mismatch repair protein mutL gi|194684662|emb|CAR46598.1| DNA mismatch repair protein [Proteus mirabilis HI4320] Length = 669 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 134/418 (32%), Positives = 211/418 (50%), Gaps = 10/418 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++ ++ I GG +I DNG Sbjct: 1 MAINLLPPQLANQIAAGEVVERPASVVKELLENSLDAGATTIDIDIDKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +++ +A+ RH TSKIS DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 CGISRDDLKLALARHATSKISTLDDLEAIMSMGFRGEALASISSVSRLTLTSRTASQEEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A G+ VEV DLF+ PAR FL++E+ E I +V+RR+A+ Sbjct: 121 WQAYAEGRDMTVAVKPAAHPVGSTVEVLDLFYNTPARRKFLRTEKTEFGHIDEVVRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS + + R+S + G F++ A++L + ++ ++G+ Sbjct: 181 SRFDVSINLTHNGKRVRQYRAAKETHQHHRRLSAICGNHFVDQAMQLTWEHGDLAIKGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + Y ++NGR ++D+ I IR AY + + P VL L +DP QVDV Sbjct: 241 EHPLAPVQGSEIQYCYVNGRMMRDRLINHAIRQAYEGYLQGEQQPSYVLYLTVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS-------VLSKKMISSFHQDNA 350 NVHPAK +RF ++ +FI Q++ + + T S L+ Q Sbjct: 301 NVHPAKHEVRFHESRLVHDFIYQAVLSVLRQVTEDTLSLDEEDNGALTATTFPENRQVAG 360 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 Y +T++ +K + S L + + D + E+ G+ Sbjct: 361 ENVFSQPYQAPVTSSTQKKSTGAYQGSAGKGLTDTQKSPQKTLDTRQFGESYQRTQGM 418 >gi|238897715|ref|YP_002923394.1| methyl-directed mismatch repair protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465472|gb|ACQ67246.1| enzyme in methyl-directed mismatch repair [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 593 Score = 370 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 160/574 (27%), Positives = 275/574 (47%), Gaps = 20/574 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERPS +KEL+ENSLDA ++++E I GG +I DNG Sbjct: 1 MPIKILSRELANQIAAGEVVERPSSVVKELVENSLDAGATKMEIDIHRGGIERIRIYDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +E+P+A+ RH T+KI +D +I + GFRGEAL SI +VS L L SR + Sbjct: 61 VGISKDELPLALARHATNKIFSLEDLQSILSMGFRGEALASISSVSRLKLTSRTLEQKEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +++P + GT +EV +LF+ PAR FL++E+ E I +V+RR+A+ Sbjct: 121 WQAYTEGREMHVAIKPASHPVGTTIEVLNLFYNTPARRKFLRTEKTEWQHIDEVVRRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ S + + R+ ++ G F+ +A+ L+ +S ++++G+ Sbjct: 181 SRFDVAIDLSHNGKLLRQYGVAQSELQKERRLLRLCGASFLQHALTLSLESTGLSVKGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y +IN R V+D+ + +R AY P VL L++DPRQVDV Sbjct: 241 ADPH-SPKINDIQYFYINRRIVRDRVVNHAVRQAYETISTGSNTPSYVLYLDMDPRQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS-TSSVLSKKMISSFHQDNAPKTHLP 356 NVHPAK +RF ++ +FI Q+I A+N S + + I+ + N Sbjct: 300 NVHPAKQEVRFHQTRLVHDFIYQAITTALNHSTSSFFAPPADIEKIAPIPKQNRSAAGSN 359 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE--SEATHYQLGIACAQIH 414 YA S + L + + T E +E + G + Sbjct: 360 HYAESDRALNKNRILTKQACEASLSFYEAAQTEQEKTPFKKEIVRDENPNYFGRVLSIFS 419 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Y + + + + ++ A + +K S + Q +L P L + E Sbjct: 420 SCYALIEYRNNIALLSLPEAER--LLKKAFLTPPSERSRIQPMLIPLKFKLEKTEIMAWE 477 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 H L +G++ N+ +R I L N+ +L+ +++ + T L + + Sbjct: 478 RHQNLLTLMGVEL-VIEKNSALLRGISLELRTHNLQKLIPELLAYLSKHET--LLPEHLA 534 Query: 535 NILATM--ACYGSIRSGRKMQSIEMNRLLREMEK 566 + LA+ A + + + +LL + E+ Sbjct: 535 DWLASQFDALH------HEWTVSQAIQLLTDFER 562 >gi|153002275|ref|YP_001367956.1| DNA mismatch repair protein [Shewanella baltica OS185] gi|166232107|sp|A6WSV4|MUTL_SHEB8 RecName: Full=DNA mismatch repair protein mutL gi|151366893|gb|ABS09893.1| DNA mismatch repair protein MutL [Shewanella baltica OS185] Length = 630 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 150/571 (26%), Positives = 258/571 (45%), Gaps = 55/571 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA +SRV+ I GG +I DNG Sbjct: 2 MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDNG 61 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK+ DD I +FGFRGEAL SI +VS LTL SR Sbjct: 62 SGIPKDELALALSRHATSKLHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTEA 121 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + V P A G+ +EV DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 122 WQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT + + +R++QV G F A+++ + +++ L GY Sbjct: 182 VRGDIHFTLTHNGKTVRNYRPAMNEAQYLQRLTQVSGRPFAEQALKIECQHDDLRLSGYL 241 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++NGR ++D+ + +R A+A+ P VL+L+IDP QVDV Sbjct: 242 QSPW-SPVITDTHYFYVNGRLIRDRLVNHAVRQAFAQK-AELEQPGYVLMLDIDPHQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--------------------------- 330 NVHPAK +RF + ++I+Q++Q A+ + G Sbjct: 300 NVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELNVVHSSSLDEVEDVFVDSPTSAVGI 359 Query: 331 ----------------ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQEN 374 + S+ + K + + + T + + T+ Sbjct: 360 AAPFALGADTLESAQPLVASAAVQVKSAGAGREGASFGTQTNAFGSMATSRDSSRGSYSA 419 Query: 375 RLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI-----ACAQIHQNYIISQTTDGLVIV 429 S + ++ + A + Y + T D L ++ Sbjct: 420 SESRQRTELPSKAAIASYGALLQTPAYSVKNHDYQPSLPMPAILDSQYWVMATADKLSLL 479 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 + +++ + +T + Q LL P + A++ EHD + +LG++ Sbjct: 480 PIKSVALATRCQEI-EAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIRQLGLELT- 537 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 + I+++P + + + +++ + + + Sbjct: 538 IRYQQLIIKKVPPYIRESQLAKVIPEWLQSL 568 >gi|113968940|ref|YP_732733.1| DNA mismatch repair protein [Shewanella sp. MR-4] gi|123029966|sp|Q0HMP1|MUTL_SHESM RecName: Full=DNA mismatch repair protein mutL gi|113883624|gb|ABI37676.1| DNA mismatch repair protein MutL [Shewanella sp. MR-4] Length = 644 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 154/586 (26%), Positives = 261/586 (44%), Gaps = 70/586 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK+ DD I +FGFRGEAL SI +VS LTL SR + Sbjct: 61 SGIPKDELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ P A G+ +EV DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAYAEGVDMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT + + +R++QV G F + A+ + + +++ L GY Sbjct: 181 VRGDIHFTLTHNGKTVRNYRPAMNEPQYLQRLTQVAGRQFADEALRVECQHDDLRLSGYL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++NGR V+D+ + +R A+A+ P VL+L+IDP QVDV Sbjct: 241 QSPW-STVLTDTHYFYVNGRLVRDRLVNHAVRQAFAQK-AEVEQPGYVLMLDIDPHQVDV 298 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAIN-------KKGISTSSVLSKKMISSFH---- 346 NVHPAK +RF + ++I+Q++Q A+ + SS + +S Sbjct: 299 NVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELGFEHPFEPSSPQVRDEVSLSESGTQ 358 Query: 347 ----------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 Q KTH S +T ++++L+ + YS Sbjct: 359 TQTEHHAFELQSPESKTHSTWNEASRVDTSRVEISRDSQLTERTRDIASARPYSGVQSNA 418 Query: 397 ------------------------------------------EESEATHYQLGIACAQIH 414 + + + A ++ Sbjct: 419 YGSMAVPRESRSGPTGESRARAELPSKAAIASYGELLQTPSYSVQDKPYQPVLAMPAMLN 478 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Y + L ++ + ++ + +T + Q LL P I AL+ Sbjct: 479 GQYWVLAQGQNLSLLPIQSVALATRSHEI-ETKLATGLIGQPLLMPVSIAADTDWPALLE 537 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 EH+ + +LG++ + I+++P L + +++ + + + Sbjct: 538 EHETLIRQLGLELT-IRYQQLIIKKVPPYLRDSQLAKVIPEWLQSL 582 >gi|117919048|ref|YP_868240.1| DNA mismatch repair protein [Shewanella sp. ANA-3] gi|189030415|sp|A0KSR5|MUTL_SHESA RecName: Full=DNA mismatch repair protein mutL gi|117611380|gb|ABK46834.1| DNA mismatch repair protein MutL [Shewanella sp. ANA-3] Length = 648 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 153/590 (25%), Positives = 260/590 (44%), Gaps = 74/590 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK+ DD I +FGFRGEAL SI +VS LTL SR + Sbjct: 61 SGIPKDELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ P A G+ +EV DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAYAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT + + +R++QV G F + A+ + + +++ L GY Sbjct: 181 VRGDIHFTLTHNGKIVRNCRPAMNEPQYLQRLTQVAGRQFADEALRVECQHDDLRLSGYL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++NGR V+D+ + +R A+A+ P VL+L+IDP QVDV Sbjct: 241 QSPW-STVLTDTHYFYVNGRLVRDRLVNHAVRQAFAQK-AEVEQPGYVLMLDIDPHQVDV 298 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH----------- 346 NVHPAK +RF + ++I+Q++Q A+ + G + Sbjct: 299 NVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELGFERPFEPSSPQIRDEASLSETGAQ 358 Query: 347 ----------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 Q KTH S +T +E+R+ + + D + V Sbjct: 359 TQTEHHAFELQSPESKTHSTWNEASRVDTSRAETSRESRIDSPLGERTRDIASARPYAGV 418 Query: 397 EE----------------------------------------------SEATHYQLGIAC 410 + + + + Sbjct: 419 QSNAYGSMAVPRESRSGSAGESRARAELPSKVAIASYGELLQTPSYSVQDKPYQPVLAMP 478 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 A ++ Y + L ++ + ++ + +T + Q LL P I Sbjct: 479 AILNGQYWVLAQGQNLSLLPIQSVALATRSHEV-ETKLATGLIGQPLLMPVSIAADTDWP 537 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 AL+ EH+ + +LG++ + I+++P L + +++ + + + Sbjct: 538 ALLEEHETLIRQLGLELT-IRYQQLIIKKVPPYLRDSQLAKVIPEWLQSL 586 >gi|54310432|ref|YP_131452.1| DNA mismatch repair protein [Photobacterium profundum SS9] gi|46914873|emb|CAG21650.1| putative DNA mismatch repair protein MutL [Photobacterium profundum SS9] Length = 717 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 144/443 (32%), Positives = 217/443 (48%), Gaps = 18/443 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDRGGSRTIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKIS DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 KGIAKDELGLALSRHATSKISSLDDLEAIVSLGFRGEALASISSVSRLTLTSRTATQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT +EV DLFF PAR FL++E+ E N I ++++R+A+ Sbjct: 121 WSAYAEGRDMDVQLKPAAHPIGTTIEVLDLFFNTPARRKFLRTEKTEFNHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS T + T R+ G+ F+ +A+ + + ++ L G+ Sbjct: 181 SRFDVSITLRHNGKTIRQYRASQTQIQKERRLVSACGQSFLQHALAVELEHGDLNLSGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++NGR ++DK I IR AY + +Y VL +E+DP QVDV Sbjct: 241 CTPQGSRSQNDVQYCYVNGRMMKDKLINHAIRQAYEANLASDQYSAYVLFIEVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q IQ A+ + + S+H Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQGIQSALQQGAM--------DDQQSYHAPQRASAIAAP 352 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 YA + + + E + + L D + EE ++ A H Sbjct: 353 YADTASESMESAHSHQIAEAAPALQAIADTPNYPNKAQPEEWLSSSVASKSASNTQH--- 409 Query: 418 IISQTTDGLVIVDQHAAHERLIF 440 Q + + D A ER + Sbjct: 410 ---QERNDKRVRDYRAV-ERSDY 428 Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats. Identities = 55/386 (14%), Positives = 124/386 (32%), Gaps = 38/386 (9%) Query: 206 PERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFIL 265 + I Q I A++ + + P + + + + + L Sbjct: 318 HDFIYQGIQSALQQGAMDDQQSYHAPQRASAIAAP-YADTASESMESAHSHQIAEAAPAL 376 Query: 266 STIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKA 325 I A P P L + + H ++ R R+ + Sbjct: 377 QAI--ADTPNYPNKAQPEEWLSSSVASKSASNTQHQERNDKRVRDYRAV------ERSDY 428 Query: 326 INKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 ++ K IS S K + + P+ + E ++ + L+ + Sbjct: 429 MSDKRISGSLSPQGKSRDESGRSSQSNYDAPQRRNNAGYQPESAPSKQEVAAYQRLIQTP 488 Query: 386 DPTYSEDNDPVEESEATHYQLG----------------------IACAQIHQNYIISQTT 423 S + ++A+ G A + + + Y++ Sbjct: 489 PSIPSHASSLGSPAKASTTLTGESRSTAVTRQNVVDTQVGVGLGKALSIVAERYLLVSRH 548 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 DG+ ++ A ++R + Q LL P + + +H L +L Sbjct: 549 DGIHVLSLDHAQRLHHKGQLRLAATE-GLKPQPLLIPHSVPVEPDLITCAEQHALLLKQL 607 Query: 484 GIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ--DRIENILATMA 541 GI + G + + I + L ++N+ QL+ +++ ++ + Q D++ + LAT Sbjct: 608 GINLKAKGKSGLIILSVCLPLRQQNLQQLIPNLLTYLLSIAEDPDAQGWDKLWDWLATQ- 666 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKN 567 C + + +L+ E+E+ Sbjct: 667 C---VMPVDTFSLSQAIQLVTELEQL 689 >gi|258625638|ref|ZP_05720519.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258582093|gb|EEW06961.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 384 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 126/375 (33%), Positives = 206/375 (54%), Gaps = 3/375 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGVDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVTQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNAPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VSFT + +T +R++ V G F+ + + + + + L G+ Sbjct: 181 SRFDVSFTLRHNGKMVRQYRAANTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRADQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ A+ + + ++ + + + + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQSAQVIAPSINDGAFHLPNVEEDAEASVAE 360 Query: 358 YATSLTNTQEKLFLQ 372 T+ + +++++ Sbjct: 361 PVTTEASVKKRVWQA 375 >gi|5542073|pdb|1B63|A Chain A, Mutl Complexed With Adpnp gi|33357456|pdb|1NHH|A Chain A, Crystal Structure Of N-Terminal 40kd Mutl Protein (Ln40) Complex With Adpnp And One Rubidium gi|33357457|pdb|1NHI|A Chain A, Crystal Structure Of N-Terminal 40kd Mutl (Ln40) Complex With Adpnp And One Potassium Length = 333 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 128/331 (38%), Positives = 189/331 (57%), Gaps = 4/331 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 3 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 62 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 63 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 122 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 123 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 183 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 242 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 243 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 302 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 VNVHPAK +RF ++ +FI Q + + Sbjct: 303 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQ 333 >gi|33357458|pdb|1NHJ|A Chain A, Crystal Structure Of N-Terminal 40kd MutlA100P MUTANT Protein Complex With Adpnp And One Sodium Length = 333 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 129/331 (38%), Positives = 190/331 (57%), Gaps = 4/331 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 3 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 62 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEALPSI +VS LTL SR + Sbjct: 63 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALPSISSVSRLTLTSRTAEQQEA 122 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +V+P A GT +EV DLF+ PAR FL++E+ E N I ++IRR+A+ Sbjct: 123 WQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIAL 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + G R+ + G F+ A+ + + ++TL+G+ Sbjct: 183 ARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWV 242 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P A Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 243 ADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 302 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 VNVHPAK +RF ++ +FI Q + + Sbjct: 303 VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQ 333 >gi|226356539|ref|YP_002786279.1| DNA mismatch repair protein [Deinococcus deserti VCD115] gi|226318529|gb|ACO46525.1| putative DNA mismatch repair protein MutL [Deinococcus deserti VCD115] Length = 550 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 154/598 (25%), Positives = 257/598 (42%), Gaps = 72/598 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI L + IAAGE++ RP ++EL++N+LDA ++RV+ + GGG S ++ DNG Sbjct: 1 MKIHVLPPHVARLIAAGEVVSRPLDVVRELLDNALDAGATRVDIEVEGGGLSLVRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS---DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+ ++ + +A RH TSK++ D + + T GFRGEAL + L L++RP Q Sbjct: 61 SGIPADMVALAPARHATSKLAPETDAVNRVTTLGFRGEALWAAAQAGILELVTRPAQQVG 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 AQ++ G+++S R GT V VR LF +PARL + E IT +I R + Sbjct: 121 AAQVSAHGDQLSVSRTS-APAGTTVTVRHLFAHLPARLRTQATPAAEVREITTLIGRYVL 179 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +P + + + R + ++ V G N V L L+G Sbjct: 180 HHPGLHWRLTVDGEARLT----HAPSDHRGAVASVYGPLSANRVVSLEAP----GLRGVV 231 Query: 238 GIPTFNRGNANQFYVFINGRT-VQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P R ++ + INGR V + + AE IP G P+ VL L ++P + Sbjct: 232 SRPELTRARRDRMHFSINGRPVVAAPELEKAVIEGLAELIPAGVAPLCVLDLTVEPENQN 291 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 NVHPAK + + + + ++ +A+ + ++ + S + AP+ Sbjct: 292 PNVHPAKQIVALADLGAVAAQVRDAVAQAMAGQVLAR---GMPALRSPTESEAAPRQSS- 347 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 + Sbjct: 348 -----------------------------------------------FPRLTQLGLYQDL 360 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y+++Q L IVD HAAHER ++E++ + L PE++ L G+ A + E Sbjct: 361 YLLAQGEGDLWIVDAHAAHERALYEQL--TRDLRAAPPHELPEPELLHLTPGQLARLHER 418 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 +L G+ E FG +R +PA L+ +P+L I++ + D ++ Sbjct: 419 GPELRSWGLTIEDFGAGLARLRTVPATLAALPVPRLHEQIVEAALGDG-----PDPQRDV 473 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LA +AC ++++G + ++L + C HGRPT ++L D+ FGR Sbjct: 474 LARLACAPALKAGM-LTLQLGEQVLAALSTCEQPWSCPHGRPTTLRLAERDLAHAFGR 530 >gi|146294369|ref|YP_001184793.1| DNA mismatch repair protein [Shewanella putrefaciens CN-32] gi|145566059|gb|ABP76994.1| DNA mismatch repair protein MutL [Shewanella putrefaciens CN-32] Length = 641 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 148/599 (24%), Positives = 265/599 (44%), Gaps = 68/599 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 5 MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDNG 64 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSK+ DD I +FGFRGEAL SI +VS LTL SR + Sbjct: 65 SGIPKEELTLALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQTEA 124 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + + P A G+ +E DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 125 WQAYAEGVDMAVKIMPAAHPVGSTIEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 184 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT + + +R++QV G F +A+++ + +++ L GY Sbjct: 185 VRGDIHFTLTHNGKLVRNYRPAVNESQYLQRLTQVSGRQFAEHALKIECQHDDLRLSGYL 244 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++NGR ++D+ + +R A+A P VL+LEIDP QVDV Sbjct: 245 QSPW-STVLTDTHYFYVNGRLIRDRLVNHAVRQAFAHK-AEIEQPGYVLMLEIDPHQVDV 302 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--------------ISTSSVLSKKMIS 343 NVHPAK +RF + ++I+Q++Q A+ + G + K I Sbjct: 303 NVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELCLTDNGNLTEPETACMDTQCAKAIE 362 Query: 344 SFH-------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 D K + A+ +T +QE+ + + + Sbjct: 363 PSGLFELASISDQTDKIERIRDASPVTASQERFTESSQAQAVTSVRSGFGIQKNAFGSMA 422 Query: 397 EESEATHYQLG---------------------------------------IACAQIHQNY 417 + ++ + + Y Sbjct: 423 QPRDSHYRSFSGGEARQRAELPSKSAIVSYGALLQTPSYNVKDKDYQPVAPMPPILDGQY 482 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 + + L ++ + +++ + +T + Q LL P + +L+ E++ Sbjct: 483 WVVVEANHLRLLPIKSVALATRAQEI-EAKLATGLIGQPLLMPVSVVADPDWQSLLDENE 541 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII-DSSTTYTLQDRIEN 535 + + ++G++ + I+++P L + + +L+ + + + ++ + L + Sbjct: 542 QLIRQIGLELT-IRYQQLIIKKVPPYLRESQLAKLIPEWLQSLRFETPSPNALAKWLAK 599 >gi|120597490|ref|YP_962064.1| DNA mismatch repair protein [Shewanella sp. W3-18-1] gi|120557583|gb|ABM23510.1| DNA mismatch repair protein MutL [Shewanella sp. W3-18-1] Length = 641 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 148/599 (24%), Positives = 265/599 (44%), Gaps = 68/599 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 5 MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDNG 64 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSK+ DD I +FGFRGEAL SI +VS LTL SR + Sbjct: 65 SGIPKEELTLALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQTEA 124 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + + P A G+ +E DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 125 WQAYAEGVDMAVKIMPAAHPVGSTIEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 184 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT + + +R++QV G F +A+++ + +++ L GY Sbjct: 185 VRGDIHFTLTHNGKLVRNYRPAVNEAQYLQRLTQVSGRQFAEHALKIECQHDDLRLSGYL 244 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++NGR ++D+ + +R A+A P VL+LEIDP QVDV Sbjct: 245 QSPW-STVLTDTHYFYVNGRLIRDRLVNHAVRQAFAHK-AEIEQPGYVLMLEIDPHQVDV 302 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI--------------STSSVLSKKMIS 343 NVHPAK +RF + ++I+Q++Q A+ + G + K I Sbjct: 303 NVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELCLTDNGNLTEPEAACMDTQCTKAIE 362 Query: 344 SFH-------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 D K + A+ +T +QE+ + + + Sbjct: 363 PSGLFELASISDQTDKIERIRDASPVTASQERFTESSQAQAVTSVRSGFGIQKNAFGSMA 422 Query: 397 EESEATHYQLG---------------------------------------IACAQIHQNY 417 + ++ + + Y Sbjct: 423 QPRDSHYRSFSGGEARQRAELPSKSAIVSYGALLQTPSYNVKDKDYQPVAPMPPILDGQY 482 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 + + L ++ + +++ + +T + Q LL P + +L+ E++ Sbjct: 483 WVVVEANHLRLLPIKSVALATRAQEI-EAKLATGLIGQPLLMPVSVVADPDWQSLLDENE 541 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII-DSSTTYTLQDRIEN 535 + + ++G++ + I+++P L + + +L+ + + + ++ + L + Sbjct: 542 QLIRQIGLELT-IRYQQLIIKKVPPYLRESQLAKLIPEWLQSLRFETPSPNALAKWLAK 599 >gi|257468133|ref|ZP_05632229.1| DNA mismatch repair protein mutL [Fusobacterium ulcerans ATCC 49185] Length = 648 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 167/661 (25%), Positives = 309/661 (46%), Gaps = 86/661 (13%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L E + N IAAGE++E P+ +KEL+ENSLDAES ++ + GG+ I+D+G G Sbjct: 4 IKVLDESVSNIIAAGEVVENPASMLKELLENSLDAESKSIKIEVKSGGRHVI-ISDDGKG 62 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 MT +++ ++V+RH TSKI+ +D N+ T+GFRGEAL SI AVS ++L SR + TG+ Sbjct: 63 MTQDDLLLSVERHATSKIAKKEDLYNLFTYGFRGEALSSISAVSKMSLSSRTKDDETGSA 122 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I +SG KI+S++ + N GT +E++DLFF PARL FL+ E I D+I + A+ P Sbjct: 123 ITVSGGKITSLKEIQRNVGTTIEIKDLFFNTPARLKFLRKTTTEYMNIKDIIVQEALGNP 182 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + T ++ ++T I ++ G + + N ++ GY G Sbjct: 183 NTAITLILDDK----VSIKTTGNGIDNTIVEIFGRNVLKN--------SKAFSMGYLGNA 230 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + R + + F+NGR V+ K + + I Y + G+YP +L LEIDP++VDVNVH Sbjct: 231 SLYRATRDSIFTFVNGRMVKSKLLENAIIDGYYTKLMKGKYPFAILFLEIDPKEVDVNVH 290 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ-----DNAPKTHL 355 P+K ++F N + I +++ I+ + + S + K + + + + Sbjct: 291 PSKKIVKFSNESNIYGKVLKEIENCFDGDDVFVSPTMEKNIEKESEALIDFTEFSKFVPM 350 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 T+ + + + +E R + + ++ +E+ +++S+ ++ + + + Sbjct: 351 KAENTTFEGIEVERYPKERRTEISPIEAEEETEKTEEAVKIQKSDEDDFENMFSEKKKNS 410 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 + I + ++ + + ++R + I S+ ++ E + + ++ + Sbjct: 411 TFEIKEEIKVFEGNEKSDTIKSDVVSEIRAEVKEDIIKSEAAVSEERATAPKTDFKVLGQ 470 Query: 476 HDEDL---HRLG-IKA-----------------ERFGPNA------IAIREIPAILSKKN 508 + R G + E +G N + +R L + Sbjct: 471 IFDSFILVERDGVFEIYDQHIVHERILYEKLKKEYYGTNVSRQQLLVPLR---ITLDLRE 527 Query: 509 IPQLLRDI---------IDEIIDSSTT----------YTLQDRIENIL------------ 537 + +I IDE ++ + ++ NI+ Sbjct: 528 RELIFENIEYFTAFGFEIDEFDENEVVIRSVPVMNFRDSTENIFRNIIKNLKENKETDIR 587 Query: 538 ----ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 +M+C G+I++ K+ EM ++R + + C HGRP +K+ L+D+EKLF Sbjct: 588 ESIIISMSCKGAIKANEKLTLHEMETIIRRLHEIGE-YTCPHGRPIIVKITLNDLEKLFK 646 Query: 594 R 594 R Sbjct: 647 R 647 >gi|90414477|ref|ZP_01222453.1| DNA mismatch repair protein [Photobacterium profundum 3TCK] gi|90324482|gb|EAS41041.1| DNA mismatch repair protein [Photobacterium profundum 3TCK] Length = 717 Score = 368 bits (946), Expect = e-99, Method: Composition-based stats. Identities = 140/428 (32%), Positives = 212/428 (49%), Gaps = 11/428 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDKGGSRTIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKIS DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 KGIAKDELGLALSRHATSKISSLDDLEAIVSLGFRGEALASISSVSRLTLTSRTATQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT +EV DLFF PAR FL++E+ E N I ++++R+A+ Sbjct: 121 WSAYAEGRDMDVQLKPAAHPIGTTIEVLDLFFNTPARRKFLRTEKTEFNHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS T + T R+ G+ F+ +A+ + + ++ L G+ Sbjct: 181 SRFDVSITLRHNGKTIRQYRASQTQIQKERRLVSACGQSFLQHALAVELEHGDLKLSGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y ++NGR ++DK I IR AY + +Y VL +E+DP QVDV Sbjct: 241 CTPQGSRSQNDVQYCYVNGRMMKDKLINHAIRQAYEANLASDQYSAYVLFIEVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q IQ A+ + + S+H Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQGIQSALQQGAM--------DEQQSYHAPQRASAIATP 352 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 YA + + + E + + L D + EE ++ A HQ Sbjct: 353 YADTASESVESAHSHQIAEAAPALQAIADSPNYPNKAQPEEWLSSSVASESASNTQHQER 412 Query: 418 IISQTTDG 425 + + Sbjct: 413 NDKRERND 420 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 49/309 (15%), Positives = 111/309 (35%), Gaps = 23/309 (7%) Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 P P L + H ++ R RN + + ++AI+ ++ Sbjct: 386 PNKAQPEEWLSSSVASESASNTQHQERNDKRERNDRAVERSDYTNGKRAIDSLSPQSNGN 445 Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY------- 389 S D A + + Y + +++++ + + T +PS + Sbjct: 446 SGSGRSSQSSYDTAQRRNNAGYQPEIGPSKQEVAAYQRLIQTPPSIPSHASSVGASAKAS 505 Query: 390 -----SEDNDPVEESEATHYQLGIACAQ----IHQNYIISQTTDGLVIVDQHAAHERLIF 440 V Q+G+ + + + Y++ DG+ ++ A Sbjct: 506 TTLTGESRTTAVTRQNVVDTQVGVGLGKALSIVAERYLLVSRHDGIHVLSLDHAQRLHHK 565 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 ++R + Q LL P + + A +H L +LGI + G + + I + Sbjct: 566 GQLRLAATE-GLKPQPLLIPHSVPVESDLIACAEQHALLLKQLGINLKAKGKSGLIILSV 624 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQ--DRIENILATMACYGSIRSGRKMQSIEMN 558 L ++N+ QL+ +++ ++ + Q D++ + LAT C + + Sbjct: 625 CLPLRQQNLQQLIPNLLTYLLSIAEDPDAQGWDKLWDWLATQ-C---VMPVDTFSLSQAI 680 Query: 559 RLLREMEKN 567 +L+ E+E+ Sbjct: 681 QLVTELEQL 689 >gi|317062418|ref|ZP_07926903.1| DNA mismatch repair protein mutL [Fusobacterium ulcerans ATCC 49185] gi|313688094|gb|EFS24929.1| DNA mismatch repair protein mutL [Fusobacterium ulcerans ATCC 49185] Length = 650 Score = 368 bits (946), Expect = 1e-99, Method: Composition-based stats. Identities = 167/661 (25%), Positives = 309/661 (46%), Gaps = 86/661 (13%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L E + N IAAGE++E P+ +KEL+ENSLDAES ++ + GG+ I+D+G G Sbjct: 6 IKVLDESVSNIIAAGEVVENPASMLKELLENSLDAESKSIKIEVKSGGRHVI-ISDDGKG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 MT +++ ++V+RH TSKI+ +D N+ T+GFRGEAL SI AVS ++L SR + TG+ Sbjct: 65 MTQDDLLLSVERHATSKIAKKEDLYNLFTYGFRGEALSSISAVSKMSLSSRTKDDETGSA 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I +SG KI+S++ + N GT +E++DLFF PARL FL+ E I D+I + A+ P Sbjct: 125 ITVSGGKITSLKEIQRNVGTTIEIKDLFFNTPARLKFLRKTTTEYMNIKDIIVQEALGNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + T ++ ++T I ++ G + + N ++ GY G Sbjct: 185 NTAITLILDDK----VSIKTTGNGIDNTIVEIFGRNVLKN--------SKAFSMGYLGNA 232 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + R + + F+NGR V+ K + + I Y + G+YP +L LEIDP++VDVNVH Sbjct: 233 SLYRATRDSIFTFVNGRMVKSKLLENAIIDGYYTKLMKGKYPFAILFLEIDPKEVDVNVH 292 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ-----DNAPKTHL 355 P+K ++F N + I +++ I+ + + S + K + + + + Sbjct: 293 PSKKIVKFSNESNIYGKVLKEIENCFDGDDVFVSPTMEKNIEKESEALIDFTEFSKFVPM 352 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 T+ + + + +E R + + ++ +E+ +++S+ ++ + + + Sbjct: 353 KAENTTFEGIEVERYPKERRTEISPIEAEEETEKTEEAVKIQKSDEDDFENMFSEKKKNS 412 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 + I + ++ + + ++R + I S+ ++ E + + ++ + Sbjct: 413 TFEIKEEIKVFEGNEKSDTIKSDVVSEIRAEVKEDIIKSEAAVSEERATAPKTDFKVLGQ 472 Query: 476 HDEDL---HRLG-IKA-----------------ERFGPNA------IAIREIPAILSKKN 508 + R G + E +G N + +R L + Sbjct: 473 IFDSFILVERDGVFEIYDQHIVHERILYEKLKKEYYGTNVSRQQLLVPLR---ITLDLRE 529 Query: 509 IPQLLRDI---------IDEIIDSSTT----------YTLQDRIENIL------------ 537 + +I IDE ++ + ++ NI+ Sbjct: 530 RELIFENIEYFTAFGFEIDEFDENEVVIRSVPVMNFRDSTENIFRNIIKNLKENKETDIR 589 Query: 538 ----ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 +M+C G+I++ K+ EM ++R + + C HGRP +K+ L+D+EKLF Sbjct: 590 ESIIISMSCKGAIKANEKLTLHEMETIIRRLHEIGE-YTCPHGRPIIVKITLNDLEKLFK 648 Query: 594 R 594 R Sbjct: 649 R 649 >gi|282896875|ref|ZP_06304881.1| DNA mismatch repair protein [Raphidiopsis brookii D9] gi|281198284|gb|EFA73174.1| DNA mismatch repair protein [Raphidiopsis brookii D9] Length = 550 Score = 368 bits (945), Expect = 1e-99, Method: Composition-based stats. Identities = 150/598 (25%), Positives = 273/598 (45%), Gaps = 65/598 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++ I AGE+I+ S ++EL+ENSLDA ++R+ + + ++TDNG G Sbjct: 2 IQSLPTEVVYLITAGEVIDSLSAVVRELVENSLDAGATRIVISLY-PEQWRVRVTDNGLG 60 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M E++ A H TSKI D I T GFRG+AL S+ + L + SR +N G + Sbjct: 61 MNLEDLQQAAIAHSTSKIHHAADLWKIKTLGFRGQALHSLTTLGELEIFSRCAGDNQGWR 120 Query: 121 IAISGEKISSVRPVAMNP-GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + + VA GT+V V +LF R L + + + I+++A+ + Sbjct: 121 VVYNKNGTVTKTEVAAIAPGTVVTVDNLFGNYAERRQGLPHKNQQLKKVQATIQQIALCH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P+V++ K+ + + S P+ ++Q+ D + + E + I L G Sbjct: 181 PQVTYQVWQDKTEWFTIYPASAVERIIPQILNQIKPGDLKELKLTIPELDSTINL--VVG 238 Query: 239 IP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P +R + + INGR V+ + + A+ +T+P RYPV + L I P Q++ Sbjct: 239 LPDRCHRHKPDWVKIAINGRIVKSPELEEAVFGAFYKTLPRDRYPVCFVHLTIQPDQINW 298 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 N +PAK+ I T + + + I +A Sbjct: 299 NRNPAKNEIYLNKMTYWQQKVTEGIDQAF------------------------------- 327 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 S+ ++ K ++ ++S L Y+ + E++ ++ Q Y Sbjct: 328 ---SIASSTIKESVRTGKISNLFKLAETKGDYNFSHSDPGENKGSNLIDLKVIGQASNTY 384 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 II++ ++G+ +++QH AHER+I+E++ + + S +L L E Sbjct: 385 IIAEYSEGMWLIEQHIAHERVIYERLCDQWQIVPVESPIVL-----------YQLSTEQV 433 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILS-KKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 + L R+ + E FG N A+R +P +L +++ P+ L ++ +L +E Sbjct: 434 KQLERINLDIECFGENLWAVRSVPEMLKNREDSPEALLEL-----------SLGGNLEAA 482 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC +IR+G M +EM +L+ + + N C HGRP + L+ S + + F R Sbjct: 483 KVAVACRTAIRNGTPMTLVEMEKLIYDWHRTRNPRTCPHGRPICLTLEESALARFFRR 540 >gi|163802743|ref|ZP_02196633.1| DNA mismatch repair protein [Vibrio sp. AND4] gi|159173450|gb|EDP58272.1| DNA mismatch repair protein [Vibrio sp. AND4] Length = 676 Score = 368 bits (945), Expect = 1e-99, Method: Composition-based stats. Identities = 164/676 (24%), Positives = 281/676 (41%), Gaps = 107/676 (15%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MSIKILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +VS LT+ SRP Sbjct: 61 KGIVKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTMTSRPAVQEQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYSEGRDMKVKLQPTAHPIGTSVEVLDLFFNTPARRKFLRTEKTEFAHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + +RI+ V G F+ N + + + + L G+ Sbjct: 181 SRFDVTINVRHNGKMVRQYRAAKNQLQTEKRIAAVCGNVFVRNMLRIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE-------- 289 P R ++ Y ++NGR ++DK I IR +YA ++ ++ V+ +E Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYAASLKSDQFAAYVVFIELDPHQVDV 300 Query: 290 -IDPRQVDVNVH-------------------------PAKSYIRFRN------------- 310 + P + +V H P + F + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALADALAQSLVIDKPQVNESAFHHAEPVELIEPSEVV 360 Query: 311 ------------------PTIIRNFI--------IQSIQKAINKKGISTSSVLSKKMISS 344 P + I + + S SSV + + S Sbjct: 361 VAPSEEPTNIPEKMGAQVPERVYQAIDSTPAYPGRSDYKVKPRDRATSDSSVREARAVDS 420 Query: 345 FHQDNA---PKTHLPKYATSLTNTQEKLFLQENR-----LSTNDLLPSDDPTYSEDNDPV 396 F + + P + L + QE R L T D P P + P+ Sbjct: 421 FKRTDWVDSKPVSKPTSSKELRHADPAPSKQEVRAYHELLKTPDFEPQTVPQKVPVSTPL 480 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 E L A A + + Y++ + G+ +V A ++ + + +Q Sbjct: 481 EMVLPPVTALSKALAVVGEQYVLMSSDGGVALVALPRAEFYRTKGQL--TPSDGALKAQP 538 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 LL P + L L +H +D +LGI+ + A+ + +PA L ++N+ L+ D+ Sbjct: 539 LLVPLSVKLEPELVQLAQDHQQDFAQLGIQLKARNDKALMVMGVPAPLRQQNLQNLIPDL 598 Query: 517 IDEI-----IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 + + +T L + I+ + + +++S + E +++ E+E+ Sbjct: 599 LSYAQARLRKEGATAQPLSELIDWLAFKV---TTVKSHYTLS--EAIQIIAELEQLR--- 650 Query: 572 QCNHGRPTFIKLKLSD 587 HG +L L D Sbjct: 651 ---HG-----QLPLED 658 >gi|85058313|ref|YP_454015.1| DNA mismatch repair protein [Sodalis glossinidius str. 'morsitans'] gi|84778833|dbj|BAE73610.1| DNA mismatch repair protein [Sodalis glossinidius str. 'morsitans'] Length = 701 Score = 368 bits (945), Expect = 1e-99, Method: Composition-based stats. Identities = 137/410 (33%), Positives = 207/410 (50%), Gaps = 7/410 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R+E I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIEIDIERGGAKRIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL S+ AVS LTL SR Sbjct: 61 SGIDKDELALALARHATSKIASLDDLETITSMGFRGEALASVSAVSRLTLTSRTAAQGEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + + +P A GT VEV DLF+ PAR F+++E+ E I +VIRR+A+ Sbjct: 121 WQAYAEGRDLAVTQKPAAHPVGTTVEVLDLFYNTPARRKFMRTEKTEFTHIDEVIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+F + S G R+ + G F+ A+ ++ + ++ + G+ Sbjct: 181 ARFDVTFILQHNGKTVRQYRAISQPGQHLRRLGALCGPAFVERALSVSWQHGDLAIHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 Y ++N RT++DK I IR AY E + + P VL L+++P QVDV Sbjct: 241 AD-QSGGELPEMQYSYVNRRTMRDKLINHAIRQAYQEQLAGTQQPAFVLFLDVEPHQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ + + ST+ L+ +N + Sbjct: 300 NVHPAKHEVRFHQARLVHDFIYQAVMIVLQQ---STTPGLAMGEEGPCAPENRLASGRNH 356 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 +A + Q S D S + +E E + G Sbjct: 357 FALPAASGQRPSVAAGAESGRQRGEISGDTGSSRQHSGGQERERSSGYAG 406 Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 84/240 (35%), Gaps = 14/240 (5%) Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 S +S+ +A + + + + +L L + + Sbjct: 450 SAADDAPLSADDAGHAGTSQVSGAHHGQSEKEVQLTLIPPEADPTGAASVKRDSGAAHVS 509 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 E + G + Y + ++ L ++ A ER + E+ + S +++ Sbjct: 510 VGESVVGNPHTFGRVLTLVPPCYALVESAGSLALLSLQVA-ERCLTER-QLTPGSETLSA 567 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL P + L E A + H L +GI + AI + +P L ++N+ L+ Sbjct: 568 QPLLIPLRMTLRNAEVAALKRHQPLLQEMGIALQAHLHQAI-LNAVPLPLRQQNLQNLIP 626 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 D++ + T ++ LA + S+ +LL E+E+ C Sbjct: 627 DLLGYL--EGETSVTHHQVAVWLARRLQHESV----AWSHSRAIQLLAEVERL-----CP 675 >gi|319427724|gb|ADV55798.1| DNA mismatch repair protein MutL [Shewanella putrefaciens 200] Length = 641 Score = 368 bits (944), Expect = 2e-99, Method: Composition-based stats. Identities = 147/599 (24%), Positives = 265/599 (44%), Gaps = 68/599 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 5 MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDNG 64 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSK+ DD I +FGFRGEAL SI +VS LTL SR + Sbjct: 65 SGIPKEELTLALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQTEA 124 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + + P A G+ +E DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 125 WQAYAEGVDMAVKIMPAAHPVGSTIEAVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 184 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT + + +R++QV G F +A+++ + +++ L GY Sbjct: 185 VRGDIHFTLTHNGKLVRNYRPAVNEAQYLQRLTQVSGRQFAEHALKIECQHDDLRLSGYL 244 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++NGR ++D+ + +R A+A P VL+LEIDP QVDV Sbjct: 245 QSPW-STVLTDTHYFYVNGRLIRDRLVNHAVRQAFAHK-AEIEQPGYVLMLEIDPHQVDV 302 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--------------ISTSSVLSKKMIS 343 NVHPAK +RF + ++I+Q++Q A+ + G + K I Sbjct: 303 NVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELCLTDNGNLTEPETACMDTQCAKAIE 362 Query: 344 -------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 + D K + A+ + +QE+ + + + Sbjct: 363 PSGLFELASTSDQTGKIERIRDASPVMASQERFTESSQTQAVTSVRSGFGIQKNAFGSMA 422 Query: 397 EESEATHYQLG---------------------------------------IACAQIHQNY 417 + ++ + + Y Sbjct: 423 QPRDSHYRSFSGGEARQRAELPSKSAIVSYGALLQTPSYNVKDKDYQPVAPMPPILDGQY 482 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 + + L ++ + +++ + +T + Q LL P + +L+ E++ Sbjct: 483 WVVVEANHLRLLPIKSVALATRAQEI-EAKLATGLIGQPLLMPVSVVADPDWQSLLDENE 541 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII-DSSTTYTLQDRIEN 535 + + ++G++ + I+++P L + + +L+ + + + ++ + L + Sbjct: 542 QLIRQIGLELT-IRYQQLIIKKVPPYLRESQLAKLIPEWLQSLRFETPSPNALAKWLAK 599 >gi|218708321|ref|YP_002415942.1| DNA mismatch repair protein [Vibrio splendidus LGP32] gi|218321340|emb|CAV17290.1| DNA mismatch repair protein mutL [Vibrio splendidus LGP32] Length = 723 Score = 367 bits (943), Expect = 2e-99, Method: Composition-based stats. Identities = 126/397 (31%), Positives = 206/397 (51%), Gaps = 6/397 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGAKMIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +V+ LT+ SRP + Sbjct: 61 KGIVKDELALALSRHATSKIHTLDDLEAIVSLGFRGEALASISSVARLTMTSRPTTQDQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WAAHSEGRDMQVKLQPAAHPIGTSVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + T +RI+ V G F+ + +++ + + L G+ Sbjct: 181 SRFDVTINLRHNGKMIRQYRAAKTQVQAEKRIAAVCGNPFVRHMLKIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRPDQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ + + ++ +++ S+FHQ AP Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSDGLAQSKQIDAAPVNQ---SAFHQSEAPSYQQDD 357 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 + + S+ D + Sbjct: 358 SVPEVDGVASFAEPENTLPSSADQSQVSERVRHAIEQ 394 >gi|254489689|ref|ZP_05102885.1| DNA mismatch repair protein MutL [Methylophaga thiooxidans DMS010] gi|224465098|gb|EEF81351.1| DNA mismatch repair protein MutL [Methylophaga thiooxydans DMS010] Length = 552 Score = 367 bits (942), Expect = 3e-99, Method: Composition-based stats. Identities = 153/524 (29%), Positives = 262/524 (50%), Gaps = 35/524 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + NQIAAGE++ERP+ +KELIENS+DA +++++ I G G +++DNG Sbjct: 5 RIHALPLHLANQIAAGEVVERPASVLKELIENSIDAGATQIDITIEGAGNQLIKVSDNGN 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ RH TSKI + S+I + GFRGEALPSI +VS LTL S+ P + G Sbjct: 65 GIHPDDLALALSRHATSKIHSSEQLSHIDSLGFRGEALPSIASVSRLTLASKQPDQDCGW 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q++ + +V P A GT V V +LFF +PAR FL+S++ E N +T + R+A++ Sbjct: 125 QVSSD---VETVEPTAHPDGTTVSVAELFFNLPARRRFLRSDKTELNHLTTTLNRLALSR 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V F+ K+ + F +RI+++ G+ F+ A L ++ I L G+ G Sbjct: 182 FDVGFSAQLADQTTLKLPAITDPKLFYQRIARICGQAFVRQARYLEQQFEAIHLHGWVGN 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 +R + Y FINGR ++D+ I IR AY + +P GR VL L + +VDVNV Sbjct: 242 FAAHRAQTDVQYFFINGRVIKDRIINHAIRQAYGDALPAGRQAAYVLYLTLPLDRVDVNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RFR+ ++ I +++Q+A+ + S + Sbjct: 302 HPTKHEVRFRDARLVHGLITRAVQEALTQDEHGVVS---------------------QSE 340 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ + ++E+ + S T + V E+ +HQ Y++ Sbjct: 341 LPLSKPENTSAVKESSQNYQPHPVSQTLTTATPPSSVSAPESDFV-------LLHQRYLL 393 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + + +V +D A ++ ++ + S+ +L P I L AL+ H Sbjct: 394 LTSPEPIV-LDLQEAALLFKRKQFLDAVDNKTLASRPILVPLNIPLASDALALVNHHHAL 452 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 L L ++ +AI ++ IP +LS ++ ++ ++ + Sbjct: 453 LKELALEFTV-NTDAITVKRIPFLLSHIDLQTIVAAVMTALQSQ 495 >gi|227499534|ref|ZP_03929641.1| DNA mismatch repair protein MutL [Anaerococcus tetradius ATCC 35098] gi|227218413|gb|EEI83664.1| DNA mismatch repair protein MutL [Anaerococcus tetradius ATCC 35098] Length = 614 Score = 367 bits (942), Expect = 3e-99, Method: Composition-based stats. Identities = 180/622 (28%), Positives = 283/622 (45%), Gaps = 38/622 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I KL ++ I +IAAGE+IE P IKEL+ENS+D+ + + I GGK++ ++TDNG Sbjct: 1 MTIIKLDDQTIEKIAAGEVIESPVSIIKELVENSIDSGADTITVEIKNGGKTYIRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EI +A +H TSKI D D +I++ GFRGEAL SI VS LT +S+ + G Sbjct: 61 CGIARGEIELAFSKHATSKIKDFNDLYDIYSLGFRGEALASIVTVSQLTAISKTDFEDIG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++I K SS+ +A N GT + V+DLF IP R FLKS+ +E N I+ ++ AI Sbjct: 121 SKINFDNGK-SSLTSIATNTGTSIVVKDLFRDIPVRRRFLKSDTLEANRISRLMYAFAIG 179 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 Y +SF F + + N N + RIS+++ + N + L K++ + GY Sbjct: 180 YKDISFKFIKNDNIEFSTN---KNEDLKVRISKLLDDSLGENLISLKAKNDIYKINGYIS 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + RGN + Y++IN R V I I Y IP R+PV + + +P+ +DVN Sbjct: 237 NSNYYRGNRSVQYIYINNRLVDSDLIRDRIELNYRGLIPNARFPVYFIYISTNPKNLDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF-----------HQ 347 VHP K I+F + I ++ + + + + + Sbjct: 297 VHPNKRSIKFSYEDELIELIDGTLSIKLGENNKAKEIDVRTETSEDLMDFSDYGQILNKY 356 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRL------------STNDLLPSDDPTYSEDNDP 395 + + ++L T+EK + L + + + S N P Sbjct: 357 NKVSSFAKEENKSNLYKTKEKKDYKSKSLDDFFNNNIELDVQNDSIEDKRKISISNKNQP 416 Query: 396 VEESEAT----HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 EE E ++ I Y + + D L I+D A E++ F+K + ++ Sbjct: 417 KEEFEEQTYLEDFEFLSYKCSIFNRYSLFEKKDELYILDHRRASEKINFDKFIKQLSNKS 476 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 I Q LL P II L + E ++ LG AE +I IR P I + Sbjct: 477 IDKQILLDPIIIKLNRNDFEKFNSKKEFINNLGFDAEIISDESIIIRSTPFIFEIPENDK 536 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 D+ID D Y + L+ + R G K+ E L++++ N Sbjct: 537 FFYDLIDIDYDRDVDYLYNKLRKLNLSYI-----FRKGDKIGEKEAFALIKDISAMANPY 591 Query: 572 QCNHGRPTFIKLKLSDIEKLFG 593 + + G+ T IK+ D+EK F Sbjct: 592 KTSDGKATLIKINEKDVEKYFE 613 >gi|126172805|ref|YP_001048954.1| DNA mismatch repair protein [Shewanella baltica OS155] gi|166232106|sp|A3D022|MUTL_SHEB5 RecName: Full=DNA mismatch repair protein mutL gi|125996010|gb|ABN60085.1| DNA mismatch repair protein MutL [Shewanella baltica OS155] Length = 638 Score = 367 bits (942), Expect = 3e-99, Method: Composition-based stats. Identities = 150/579 (25%), Positives = 257/579 (44%), Gaps = 63/579 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA +SRV+ I GG +I DNG Sbjct: 2 MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDNG 61 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK+ DD I +FGFRGEAL SI +VS LTL SR Sbjct: 62 SGIPKDELALALSRHATSKLHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTEA 121 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + V P A G+ +EV DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 122 WQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT + + +R++QV G F A+++ + +++ L GY Sbjct: 182 VRGDIHFTLTHNGKMVRNYRPAMNEAQYLQRLTQVCGRPFAEQALKIECQHDDLRLSGYL 241 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + ++ Y ++NGR ++D+ + +R A+A+ P VL+L+IDP QVDV Sbjct: 242 QSPW-SPVISDTHYFYVNGRLIRDRLVNHAVRQAFAQK-AELEQPGYVLMLDIDPHQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--------------------------- 330 NVHPAK +RF + ++I+Q++Q A+ + G Sbjct: 300 NVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELNFVHSSSLDEVEDVFVDAPTSATEI 359 Query: 331 ------------------------ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQ 366 +S + K + + + T + + T Sbjct: 360 SAPFVLGADSAQVNVPADTLESAQPLVASAVQVKSAGAGREGTSFGTQTNAFGSMATPRD 419 Query: 367 EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE-----ATHYQLGIACAQIHQNYIISQ 421 S + ++ + A + Y + Sbjct: 420 NSRGSYSAGESRQRTELPSKAAIASYGALLQTPSYSVKDQDYQPSLPMPAILDGQYWVMA 479 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 T D L ++ + +++ + +T + Q LL P + A++ EHD + Sbjct: 480 TADKLSLLPIKSVALATRCQEI-EAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIR 538 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 +LG++ + I+++P + + + +++ + + + Sbjct: 539 QLGLELT-IRYQQLIIKKVPPYIRESQLAKVIPEWLQSL 576 >gi|84393188|ref|ZP_00991952.1| DNA mismatch repair protein [Vibrio splendidus 12B01] gi|84376240|gb|EAP93124.1| DNA mismatch repair protein [Vibrio splendidus 12B01] Length = 752 Score = 367 bits (942), Expect = 3e-99, Method: Composition-based stats. Identities = 122/408 (29%), Positives = 206/408 (50%), Gaps = 3/408 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGAKMIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +V+ LT+ SRP + Sbjct: 61 KGIVKDELALALSRHATSKIHTLDDLEAIVSLGFRGEALASISSVARLTMTSRPATQDQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WAAHSEGRDMQVKLQPAAHPIGTSVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + T +RI+ V G F+ + +++ + + L G+ Sbjct: 181 SRFDVTINLRHNGKMIRQYRAAKTQVQAEKRIAAVCGNPFVRHMLKIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRPDQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ + + + + + + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSDGLAQSKQIDAVPIKQSAFHQSEVIHHQQDSSNS 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 + + E +R + S+ + ++E+ Sbjct: 361 GIGEVASFSEPESSMPSRSDQTQVSDSERHAIEQTPAYPRKAESERTY 408 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 82/224 (36%), Gaps = 34/224 (15%) Query: 364 NTQEKLFLQENRLSTNDLLPSDDPTY--SEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 + QE + E R + ++ + ++ N + A LG A + + + Y++ Sbjct: 516 SPQEHVAPVETRDNIENIENKGNIEAKPAQQNPVHSKPRAPVTDLGKAVSVVERQYLVMG 575 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 +G V+V A + ++ D + SQ LL P I L + + L Sbjct: 576 NKNGSVLVSLAKAELLRVIGQL--DTREGALKSQPLLVPLSIKLGSELVEVAKALSQTLA 633 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 LGI+ + A+ + +P+ L ++N+ L+ D++ + ++N AT+ Sbjct: 634 LLGIELKARNSEAVMVMGVPSPLRQQNLQILIPDLLSYAASLNA-----QIVDNHAATV- 687 Query: 542 CYGSIRSGRKM------------------QSIEMNRLLREMEKN 567 + E +L+ E+E+ Sbjct: 688 ------FNDMLPSLVNWIGIQTAQVKSDYTLSEAVQLVGELEQL 725 >gi|37520848|ref|NP_924225.1| DNA mismatch repair protein [Gloeobacter violaceus PCC 7421] gi|35211843|dbj|BAC89220.1| DNA mismatch repair protein [Gloeobacter violaceus PCC 7421] Length = 573 Score = 367 bits (942), Expect = 3e-99, Method: Composition-based stats. Identities = 147/597 (24%), Positives = 265/597 (44%), Gaps = 81/597 (13%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L+++ + +AAGE+I+ P+ ++EL++NSLDA + R+ Q+ DNG G Sbjct: 46 IRPLADQTVRLLAAGEVIDSPAAVVRELVDNSLDAGADRIRVSFW-PESWRVQVQDNGLG 104 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 +EE+PMA + H TSK+ +D + T GFRGE L SI V+ L +++ P T + Sbjct: 105 FEAEELPMAARSHATSKLGAIEDLWRLRTLGFRGEGLHSIAVVARLEILTCTPTARTATR 164 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ +P A PGT+V V +LF P R FL + + +T ++ R A+AY Sbjct: 165 ARYDHKGELVESQPAAAAPGTVVTVSELFELQPVRRRFLADTKAQVRAVTQLVHRYALAY 224 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P F + + ++ +R Q++ ++ E++ + + ++ G+ Sbjct: 225 PGHLFELAVDGRLQLQLWAAPG---LKQRALQLLNSYDEHDLREVHLERDGRRVRLAIGL 281 Query: 240 P-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P +R A+ ++INGR V+ + +R + T+ GR PV ++ L + +VD N Sbjct: 282 PDRCSRARADWLQIYINGRFVRHGELEQAVRAGFERTLRPGRQPVCIVQLILPADEVDWN 341 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 HPAK ++ ++ +I + + PK Sbjct: 342 RHPAKLEVQLAGTAPACELVVAAIGEGLRHFA-------------------------PKP 376 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 A +L E + +LL A AQ+HQ YI Sbjct: 377 AAALLRLAEAHLPYAAESTGGELL------------------------LKALAQLHQTYI 412 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +++ G+ +V+QH AHER++FE + D+ + L + Sbjct: 413 LAEYPGGVCLVEQHVAHERVLFEALESDWQVVPLE------------PPLALELSSRQAQ 460 Query: 479 DLHRLGIKAERFGPNAIAIREIP-AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 +L GI+ E FG + +R P A++ + + + L ++ D Q+ + Sbjct: 461 NLTEHGIEVEAFGERSWLVRSAPVALVGRVDCAEGLMELAD-----------QEDAAQMR 509 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 A ++C +IR+G + ++M +LL ++ N C HGRP ++ L ++ + F R Sbjct: 510 AALSCRTAIRNGTALSPLQMQQLLDRWQRTRNPHTCPHGRPIYMPLTDGELARFFRR 566 >gi|86148236|ref|ZP_01066533.1| DNA mismatch repair protein [Vibrio sp. MED222] gi|85834006|gb|EAQ52167.1| DNA mismatch repair protein [Vibrio sp. MED222] Length = 728 Score = 367 bits (942), Expect = 3e-99, Method: Composition-based stats. Identities = 121/408 (29%), Positives = 207/408 (50%), Gaps = 3/408 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGAKMIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +V+ LT+ SRP + Sbjct: 61 KGIVKDELALALSRHATSKIHTLDDLEAIVSLGFRGEALASISSVARLTMTSRPTTQDQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WAAHSEGRDMQVKLQPAAHPIGTSVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + T +RI+ V G F+ + +++ + + L G+ Sbjct: 181 SRFDVTINLRHNGKMIRQYRAAKTQVQAEKRIAAVCGNPFVRHMLKIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRPDQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ + + ++ + + + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSDGLAQSKQIDAAPIKQSAFHQSEVMHHQQGSSNP 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 + + E + + + S+ + ++E+ Sbjct: 361 GIGEIASFSEPESIMPSSSEQPQVSDSERYAIEQTPAYPRKAESEQVY 408 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 19/246 (7%) Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 + ++ L K + QE+ D Sbjct: 463 EPHQHHGEPAPSKREVKAYKELLKTPDFDDQVVQPSSPQEHVAPVETRDNIDKEAKPSQQ 522 Query: 394 DPVE-ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 +PV + A LG A + + + Y++ +G V+V A + ++ D + Sbjct: 523 NPVNLKPRAPVTDLGKAVSIVERQYLVMGNKNGSVLVSLAKAELLRVVGQL--DTRGGAL 580 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 SQ LL P I L + + L LGI+ + A+ + +P+ L ++N+ L Sbjct: 581 KSQPLLVPLSIKLGSELVEVAKALSQTLALLGIELKARNSEAVMVMGVPSPLRQQNLQIL 640 Query: 513 LRDIIDEIIDSS-----------TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 + D++ + ++ L + I A ++S + E +L+ Sbjct: 641 IPDLLSYAASLNAQIVDNHSANVSSDLLPSLVNWIGIQTAQ---VKSDYTLS--EAVQLV 695 Query: 562 REMEKN 567 E+E+ Sbjct: 696 GELEQL 701 >gi|51598472|ref|YP_072660.1| DNA mismatch repair protein [Borrelia garinii PBi] gi|81825651|sp|Q662F3|MUTL_BORGA RecName: Full=DNA mismatch repair protein mutL gi|51573043|gb|AAU07068.1| DNA mismatch repair protein [Borrelia garinii PBi] Length = 611 Score = 367 bits (941), Expect = 4e-99, Method: Composition-based stats. Identities = 148/623 (23%), Positives = 270/623 (43%), Gaps = 45/623 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + ++ +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG Sbjct: 3 KIRFLDKYLVQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLEEGGIHKILIIDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + H TSKIS +D I T GFRGEAL SI S++++ S N + Sbjct: 63 GIGKEDLKICYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTGNES-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + GTIV V +F PAR FLK E +ET + V+ I + Sbjct: 122 QIEVENGIEKCFKKQPAINGTIVNVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTG 238 P+++F + + + + +R+ V G NN ++ ++ I ++ + Sbjct: 182 PEINFEINLNQK----LRKIYFKESLIDRVQNVYGNVIENNKFKVLKKEHENIKIELFLA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 F++ + F+N R + K +L I ++ I G +P+ L LEI+P +D N Sbjct: 238 PANFSKKSKRHIKTFVNRRPIDQKDLLEAITNGHSRIISPGNFPICYLFLEINPEYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS--------------- 343 VHP K +RF N + I +I +K S + ++ K+ ++ Sbjct: 298 VHPQKKEVRFFNLPFLFKLISDNINNFFDKDINSYNEIVIKRQLTDDDNLIEMINQPKNL 357 Query: 344 ------------SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + ++ + + + +NR S + + + Sbjct: 358 NKTNTYDIIQNKNLETEHTVNDLSKNIIQNDIGLRRYNSIIQNRPSFKENITNIFSDKFL 417 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 + + QI ++I + + + +DQHA HE++I+EK+R NS K Sbjct: 418 EFEEPPNKNEKEEIKFNYIGQIFSEFLIVEKVNEIYFIDQHAVHEKIIYEKLR---NSKK 474 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + L+ E + + +I E+ ++ I + GP + IP I ++ Sbjct: 475 TVQKLLIPIEFTIVDKNIEEIIDSEIEEYKKMDIIISKIGPKKYQLESIPNICNQYE--- 531 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 + + S + T+ ++ A +AC ++++ + L+ E K Sbjct: 532 ---NTLINFFQSRKSRTINSLESDLYANIACRKAVKTNDILSLEFSKFLIDEFFKLE-IK 587 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 C HGR + K+ ++EK R Sbjct: 588 HCPHGRKIYYKISKFELEKKVAR 610 >gi|113474371|ref|YP_720432.1| DNA mismatch repair protein [Trichodesmium erythraeum IMS101] gi|110165419|gb|ABG49959.1| DNA mismatch repair protein MutL [Trichodesmium erythraeum IMS101] Length = 587 Score = 367 bits (941), Expect = 4e-99, Method: Composition-based stats. Identities = 169/623 (27%), Positives = 280/623 (44%), Gaps = 79/623 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L +++++ IAAGE+I+ + ++EL+ENSLDA ++R+ I + QI+DNG Sbjct: 4 QIQTLPKEVVSLIAAGEVIDSLAAVVRELVENSLDAGATRIIVSIIS-EQWRVQISDNGM 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPP-----Q 114 GM + A H TSKI++ D + I + GFRGEAL S+ +S+L ++SRP Sbjct: 63 GMNLANLKRAANPHSTSKITNLQDLTKISSLGFRGEALHSLANLSNLEILSRPKSPLSEN 122 Query: 115 NNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR 173 N G ++ + K VA+ PGTIV+V +F P R + S + I +I+ Sbjct: 123 ENEGWRVVYDQQGKSVKAERVAIAPGTIVKVSHIFGKWPVRRKGMPSPPQQMRGIQLIIQ 182 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKS---- 228 ++A+ YP V++ +++ +T P+ +S V D E++E+ Sbjct: 183 QIALCYPDVTWQIWQGSKLWIQISPGATAKQILPQILSTVRLNDLQYIQQEIDEQEAEEL 242 Query: 229 ----------------NEITLQGYTGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTA 271 + +L+ G+P +R + V INGR V+ + TI + Sbjct: 243 NIQTSSFSQSQDSQLLDRQSLELVLGLPDRCHRRRPDWVKVGINGRVVKVPELEQTIIRS 302 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 A T P RYP+ + L+I P Q++ N HPAK+ I N + I I KA+ Sbjct: 303 LARTCPGDRYPLCFIHLQIFPYQINWNRHPAKTEIYLDNLKFWQQQINLVIGKALQ---- 358 Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 F D P+ L + L E + + Sbjct: 359 -------------FSSDIMPEFPLSERVEKLLKVSENTGNYQVSRA----------IEVS 395 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 ++ ++ A AQ+H YI+++ G+ +++QH AHER+++E++ + Sbjct: 396 PDNTEQKKSKLGLIELKAIAQLHNTYIVAEHPSGIWLIEQHIAHERILYEELCDAWEIIF 455 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + + +L L E L RL I E FG A R P +L+K+N Sbjct: 456 LETPIILHH-----------LSPAQIEQLQRLNIDIETFGDLLWAARSAPKMLAKRN--- 501 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 D D +I+ S L+ +AT AC +IR+G + EM LL + + N Sbjct: 502 ---DCADALIELSKGGDLES---AKVAT-ACRSAIRNGTPLSLPEMQSLLNKWQLTHNPR 554 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP ++ L+ S + + F R Sbjct: 555 TCPHGRPIYLPLEESALSRFFRR 577 >gi|114564474|ref|YP_751988.1| DNA mismatch repair protein MutL [Shewanella frigidimarina NCIMB 400] gi|122298757|sp|Q07XW5|MUTL_SHEFN RecName: Full=DNA mismatch repair protein mutL gi|114335767|gb|ABI73149.1| DNA mismatch repair protein MutL [Shewanella frigidimarina NCIMB 400] Length = 619 Score = 367 bits (941), Expect = 4e-99, Method: Composition-based stats. Identities = 149/570 (26%), Positives = 257/570 (45%), Gaps = 58/570 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MAIQLLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIDKGGSKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK+ DD I +FGFRGEAL SI +VS LTL S+ + + Sbjct: 61 AGIAKDELALALSRHATSKVHTLDDLEAILSFGFRGEALASISSVSRLTLTSKTAEQSEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ V P A G+ +EV DLFF PAR FLKS++ E I + ++R+AI Sbjct: 121 WQAYAEGSQMDVKVTPAAHPQGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAI 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT + + +T+ +R++Q+ G F + A+ + + ++ L GY Sbjct: 181 VRSDIHFTLTHNAKLVRQYRPANTDIQTQQRLAQICGRAFADQALSIACEHDDFVLTGYL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + ++NGR ++D+ + ++ A+AE + P VL+L +DP QVDV Sbjct: 241 QSPQDTVIT-DTNFFYVNGRLIRDRLVNHAVKQAFAEY-GIEHQPGYVLMLSLDPHQVDV 298 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK------------------ 339 NVHPAK +RF + +FI+Q+++ A+ + S + Sbjct: 299 NVHPAKHEVRFHQSRYVHDFILQAVRSALVEMPALPLSDELEHHDNVAPMHTESNLMHDV 358 Query: 340 -----------------------KMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL 376 S H Y+ ++ + +K + Sbjct: 359 KVVDTAEDEFTLNHGSSKAINSVSQFGSMHVPGKNNGLSGGYSAAIKPSYDKKPSSASSA 418 Query: 377 STNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH---- 432 T + + + + + + D L ++ Sbjct: 419 QTKTAIANYGQLLHTPMNSAVSYVHEAAPQVTMPPLLAGEHWVICKDDKLSLLPIKSVLL 478 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE-RFG 491 A ++ + K+ + + SQ LL P I + D+ L ++GI+ RF Sbjct: 479 AVRKKDVETKL-----ANGLVSQPLLMPVSIAADLDWIETLAVRDQLLRQMGIELTIRF- 532 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEII 521 + I+++P L + + ++ +++ I Sbjct: 533 -QQLIIKKVPPYLRECQLAIVIPELLQWIQ 561 >gi|307611574|emb|CBX01254.1| DNA mismatch repair protein MutL [Legionella pneumophila 130b] Length = 576 Score = 367 bits (941), Expect = 4e-99, Method: Composition-based stats. Identities = 148/569 (26%), Positives = 275/569 (48%), Gaps = 24/569 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +LS I NQIAAGE+IERP+ +KEL+ENSLDA +S + + GG ++DNG Sbjct: 4 RIHQLSPAIANQIAAGEVIERPASVVKELLENSLDAGASVIGVDVNYGGLLQITVSDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+AV H TSKI DD +I + GFRGEAL SI +V+ +T++S+P + + Sbjct: 64 GIFGDDLPLAVAAHATSKIRTLDDLYSIDSMGFRGEALASIASVAKVTIISKPEEQDNAM 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + ++ P A N GT ++V DLF+ P R FLK+E++E I V++R A++ Sbjct: 124 MLRVEG-ENRTLSPCARNIGTTIDVSDLFYNAPVRKRFLKNEKLEFQAIEMVVKRFALSA 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++ T K + + + R+ +++G F+ A+ L+ + + + L G+ Sbjct: 183 PRIALTLKHNKKLIFSLPPALSEQAKAIRMGRILGNTFMREAIFLDVEHSGMRLYGWISN 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R ++ ++++N R V+DK + ++ AY + GR+P+ +L + +VDVNV Sbjct: 243 HRLQRSQNDRQWIYVNQRMVKDKLLQHAVKQAYDGLLHAGRFPICLLYFTLPASEVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RF+ P ++ +F + KA+ + + S +S + P + Sbjct: 303 HPTKHEVRFQQPRLVHDFFTSQLTKAL-QSTLDHSDTREYAYAASSSNEQQNTVSEPSHI 361 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + + E R + + + + S H + +++ +I+ Sbjct: 362 CNDRESHEAA-----RALSPSWSANSLSSSVTSKGYKKTSSVYHPETEFQWVILNERFIL 416 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + D A + I +++ Q + S+ LL L + + Sbjct: 417 VFIKQRPYLADLVALFQEWIEKQLMQKAL--PLESRPLLISIRYPLPNQWIHKPEQLKRE 474 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L R+GI+ E + + IR IP ++ + +I+ E+ T E ++A Sbjct: 475 LARVGIQIEYSNADDLLIRSIPLNAPYLDVRRFF-NILCELDFFDT--------EQLIAL 525 Query: 540 MACYGSIRSGRKMQSI---EMNRLLREME 565 ++ I +++ EMN++L E+ Sbjct: 526 IS-RSQIFDPKQLTVEERIEMNQVLLELS 553 >gi|149192037|ref|ZP_01870264.1| DNA mismatch repair protein [Vibrio shilonii AK1] gi|148834138|gb|EDL51148.1| DNA mismatch repair protein [Vibrio shilonii AK1] Length = 666 Score = 366 bits (940), Expect = 5e-99, Method: Composition-based stats. Identities = 140/533 (26%), Positives = 244/533 (45%), Gaps = 29/533 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGAKLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +V+ LTL SRP Sbjct: 61 KGIAKDELQLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVARLTLTSRPATQEQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT +EV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WSAYAEGRDMAVKLKPAAHPIGTTLEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS + T+ +RI+ V G F+ N +++ + N++ L G+ Sbjct: 181 SRFDVSINLKHNGKLVRQYRAAKTDAQTEKRIAAVCGAPFVRNMLKIELQHNDLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ +L ++IDP QVDV Sbjct: 241 TTPEGARAQSDLQYCYVNGRMMKDKLINHAIRQSYENSLAPEQFAAYILFIDIDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++ A+ + + +S S+ Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSDALVQAKSIDAQPVSPAAFSTSANSQNEAKVTAH 360 Query: 358 YATSLTNTQ----------EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 T+ E + R + + E +E H Sbjct: 361 REPEQTSRIDVDDATLSAVESIPAYPGRADYQRRDSQSEYAVQSTSVGHEIAE--HSPSS 418 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 ++ ++++ ++ A E +++++ + + L E Sbjct: 419 DWVSERGAKTSSNKSSARIIEKAPTA-DEVRVYQELM---------QTPDIETNVHQLSE 468 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI----LSKKNIPQLLRDI 516 E + D ++ R+G + ++ P L + +L + Sbjct: 469 PEMQKPNQIDVNIERIGKAIAIVEQCYVLVKAEPICAVVSLRRAEFYKLFAQL 521 >gi|217974862|ref|YP_002359613.1| DNA mismatch repair protein [Shewanella baltica OS223] gi|217499997|gb|ACK48190.1| DNA mismatch repair protein MutL [Shewanella baltica OS223] Length = 637 Score = 366 bits (940), Expect = 5e-99, Method: Composition-based stats. Identities = 156/579 (26%), Positives = 265/579 (45%), Gaps = 63/579 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA +SRV+ I GG +I DNG Sbjct: 1 MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK+ DD I +FGFRGEAL SI +VS LTL SR Sbjct: 61 SGIPKDELALALSRHATSKLHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + V P A G+ +EV DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT + + +R++QV G F A+++ + +++ L GY Sbjct: 181 VRGDIHFTLTHNGKTVRNYRPAINEAQYLQRLTQVCGRPFAEQALKIECQHDDLRLSGYL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + ++ Y ++NGR ++D+ + +R A+A+ P VL+L+IDP QVDV Sbjct: 241 QSPW-SPVISDTHYFYVNGRLIRDRLVNHAVRQAFAQK-AELEQPGYVLMLDIDPHQVDV 298 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--------------------------- 330 NVHPAK +RF + ++I+Q++Q A+ + G Sbjct: 299 NVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELNFVHSSSLGEVEDVFVDAPTSATEI 358 Query: 331 ------------------------ISTSSVLSKKMISSFHQDNAPKTHLPKY---ATSLT 363 +S + K + + + T + AT Sbjct: 359 SAPFVLGADSAQVNVPADTLESAQPLAASAVQVKSAGAGREGASFGTQTNAFGSMATPRD 418 Query: 364 NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES--EATHYQLGIACAQIHQNYIISQ 421 N++ E+R T + +Y S + + A + Y + Sbjct: 419 NSRGNYSAGESRQRTELPSKAAIASYGALLQTPSYSVKDQDYQPSLPMPAILDSQYWVMA 478 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 T D L ++ + +++ + +T + Q LL P + A++ EHD + Sbjct: 479 TADKLSLLPIKSVALATRCQEI-EAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIR 537 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 +LG++ + I+++P + + + +++ + + + Sbjct: 538 QLGLELT-IRYQQLIIKKVPPYIRESQLAKVIPEWLQSL 575 >gi|291565823|dbj|BAI88095.1| DNA mismatch repair protein MutL [Arthrospira platensis NIES-39] Length = 571 Score = 366 bits (940), Expect = 5e-99, Method: Composition-based stats. Identities = 154/610 (25%), Positives = 264/610 (43%), Gaps = 72/610 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I LSE +++ IAAGE+I+ + ++EL+EN++DA+++R+ + + Q+ DNG Sbjct: 7 SIETLSEDVVDLIAAGEVIDSVAAVVRELVENAIDAKATRISVSLW-PQQWRIQVADNGE 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT-- 117 GM + A H TSKI+ D I + GFRGEAL SI +S L ++SR +++ Sbjct: 66 GMDLVNLKRAAMAHSTSKIATARDLLKISSLGFRGEALHSIAQLSDLEILSRGGLSSSPS 125 Query: 118 --GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 + + V VA+ PGT+V+V +LF +R + + +++++ Sbjct: 126 SGWRVVYNHQGEAEMVETVAIAPGTVVKVSNLFANWSSRRTAGPTATQQLRAAQLMLQQI 185 Query: 176 AIAYPKVSFTFSTIKSNRYKM-NFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 A+ +P+V++ + +T PE I V D ++++ Sbjct: 186 ALCHPQVTWQIHQNDRPWLRFGPAVTTQQMLPEFIRGVRVGDLQYLKMDVDPPQQVEECH 245 Query: 235 GYTGIPTF----------NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 + +R + + +NGR V+ + TI +A+A T RYPV Sbjct: 246 KFLSKSWLEVVIGLPDRASRRRKDWVKIGVNGRMVRSPELEPTILSAFARTCGRDRYPVC 305 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 + L IDP +D N HP+K+ I + I +I + + Sbjct: 306 FVHLHIDPALIDWNRHPSKAEIYLHYLNHWQEQIHLAIDQTLKLN--------------- 350 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 P+ ++ N EKL ++ T + E + Sbjct: 351 -----------PESLSAGVNPIEKLLRVSEDTASY-------RTRPTPLESAENPQRVDV 392 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 A QIH YI+++ +GL +V+QH AHER+I+E++ + + +++ ++ Sbjct: 393 PKLKAIGQIHNTYIVAEHPEGLWLVEQHIAHERVIYEQLCRRWQVIPLSTPIIVAN---- 448 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L E L RL ++ + FG AIR P IL L +D + +I+ S Sbjct: 449 -------LSEAQLEQLTRLNLEVDPFGDGLWAIRSAPEIL------ALRQDCQEALIELS 495 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 LQ +AT AC +IR+G + EM LL + + C HGRP F+ L+ Sbjct: 496 LGGDLQAAQ---VAT-ACRSAIRNGTSLSLTEMQTLLDQWVSTRSPRTCPHGRPIFLSLE 551 Query: 585 LSDIEKLFGR 594 S + + F R Sbjct: 552 ESSLARFFRR 561 >gi|308048236|ref|YP_003911802.1| DNA mismatch repair protein MutL [Ferrimonas balearica DSM 9799] gi|307630426|gb|ADN74728.1| DNA mismatch repair protein MutL [Ferrimonas balearica DSM 9799] Length = 609 Score = 366 bits (940), Expect = 5e-99, Method: Composition-based stats. Identities = 152/556 (27%), Positives = 258/556 (46%), Gaps = 43/556 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R+E I GG I DNG Sbjct: 1 MAIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIEVEIDRGGSKRILIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSK++ D +I +FGFRGEAL SI +VS LTL SR + Sbjct: 61 QGINKEELSLALARHATSKVASLADLESILSFGFRGEALASISSVSRLTLSSRTADGSEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G +++ +P A GT VEV DLFF PAR FLK+++ E I + +RR+A+ Sbjct: 121 WQAYAEGREMAVRVQPTAHPVGTTVEVVDLFFNTPARRRFLKADKTEFTHIEEQLRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A + F + S +R++ + G F A L ++++ L+GY Sbjct: 181 AREGIHFILRHNGKVVRQYRPASNERQREQRLAAICGSAFTERAFGLTSATDDLALRGYL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 + ++ Y ++NGR V+D+ + +R A E G+ V L L +DP +VDV Sbjct: 241 ALDDERARVSDIQYFYVNGRVVRDRLVSHAVRQAMEEAGLPGQAGFV-LYLSLDPHEVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMISSFHQDNAPKTH 354 NVHPAK +RF + +FI+Q++Q+ + + ++ + ++ + + + P Sbjct: 300 NVHPAKHEVRFHQARYVHDFILQALQQGLAQRQQPALTPQHQVQERPATPYREGEGPYPL 359 Query: 355 LP--------------------------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 P + + + S Sbjct: 360 TPTEGLDSARHDSDSRPSSSGAGGGYSGGGYAGAGRGGQAAYQPPPLRPSQSPTRSAVDN 419 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV----DQHAAHERLIFEKMR 444 Y+ +EA + + + + + Q L +V A +R + E++ Sbjct: 420 YAHLMQTPAPAEAPATDRWRWLSALDEQHGLVQKQQQLRLVRLPDLGRALMKRDLSERL- 478 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 + + Q LL P + + ++ DE L RLG + G + IR +PA+L Sbjct: 479 ----AQGLVGQPLLLPVSVPVDVNWVTILEAQDELLRRLGTQLVVQGER-LVIRTVPAVL 533 Query: 505 SKKNIPQLLRDIIDEI 520 + ++ + + +++ + Sbjct: 534 RRADLAKAIPELLQWL 549 >gi|91794555|ref|YP_564206.1| DNA mismatch repair protein MutL [Shewanella denitrificans OS217] gi|123165778|sp|Q12J93|MUTL_SHEDO RecName: Full=DNA mismatch repair protein mutL gi|91716557|gb|ABE56483.1| DNA mismatch repair protein MutL [Shewanella denitrificans OS217] Length = 665 Score = 366 bits (939), Expect = 6e-99, Method: Composition-based stats. Identities = 136/400 (34%), Positives = 208/400 (52%), Gaps = 10/400 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIHILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIDKGGSKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK+ DD I +FGFRGEAL SI +V+ LTL S+ + Sbjct: 61 SGIPKDELALALSRHATSKVHSLDDLEAILSFGFRGEALASISSVARLTLTSKTAEQTEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ P A G+ +EV DLFF PAR FLKS++ E I + ++R+AI Sbjct: 121 WQAHAEGSQMDVSLMPAAHPQGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAI 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + F+ + + +T+ +R+SQ+ G F A+ L + + ++L+GY Sbjct: 181 VRTDIHFSLTHNGKLVRQYRAANTDIQMQQRLSQICGRAFAEQAITLACEHDGLSLEGYI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P N + Y ++NGR V+DK + +R A+AE + P VL L +DP QVDV Sbjct: 241 QSPHDN-SVTDTNYFYVNGRLVRDKLVNHAVRQAFAEH-QWHQQPSYVLKLTLDPHQVDV 298 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF + +FI+Q++Q A+ + S F QDN Sbjct: 299 NVHPAKHEVRFHQSRYVHDFILQALQSALAQFPAKGSQAEYD-----FEQDNGSLEATAA 353 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 + + +E S + ++ + + E Sbjct: 354 SNPDNGLSPSRGHAEEGDFSNSVAYAANAASVHRGSTSSE 393 >gi|315303085|ref|ZP_07873784.1| DNA mismatch repair protein MutL [Listeria ivanovii FSL F6-596] gi|313628546|gb|EFR96980.1| DNA mismatch repair protein MutL [Listeria ivanovii FSL F6-596] Length = 454 Score = 365 bits (938), Expect = 8e-99, Method: Composition-based stats. Identities = 153/452 (33%), Positives = 242/452 (53%), Gaps = 14/452 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL++ + + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLSMETST-GESKGTS 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + N NG+ + I+ + G ++ + +S + + GY +P Sbjct: 184 DISFRFSHNGKSILQSN---GNGDLRQVIAAIYGVSIARKSIPVEAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK--------MISSFHQDNAPK 352 PAK +R + I Q I++A ++ + +SKK I ++N PK Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKQAFHELQLIPDGEVSKKQKELQKSEQIQMSFEENKPK 360 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 P + + + + T+ +L S E+ E+ Q Sbjct: 361 EESPTLFSKPNIPEYIPSDDDAPIETDFILESAPVYSPEEEIEHPETPKERIPKMYPIGQ 420 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 +H YI +Q +GL I+DQHAA ER+ +E R Sbjct: 421 MHATYIFAQNENGLYIIDQHAAQERIKYEFYR 452 >gi|148379758|ref|YP_001254299.1| DNA mismatch repair protein MutL [Clostridium botulinum A str. ATCC 3502] gi|148289242|emb|CAL83338.1| DNA mismatch repair protein [Clostridium botulinum A str. ATCC 3502] Length = 589 Score = 365 bits (938), Expect = 9e-99, Method: Composition-based stats. Identities = 159/607 (26%), Positives = 272/607 (44%), Gaps = 36/607 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + N+IAAGE+IERP +KEL+ENS+DA + + I GG+ +I D+G Sbjct: 3 KINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +I A H TSKI+ +D I T GFRGEAL SI +VS L SR N G Sbjct: 63 GIYPIDIKNAFLPHATSKINSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNFGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G KI ++ N GT +EV DLF+ +PARL FLKS + +++ I+D++ R +++ Sbjct: 123 EIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKFLKSARSDSSSISDIVNRFILSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF K GN + I V + N + + I++ G+ G Sbjct: 183 PDISFNLINKGKQSIK---SYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R + +F+N R V+ KFI + + A+ + + YP V+ ++I P +DVNV Sbjct: 240 PEISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN-KKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 HP KS ++F++ + I ++ +AI + S ++ +K+ I+ + + + + Sbjct: 300 HPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFTNFFNKEDINIYDSEKSITEPIKLE 359 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 + + + + N++ + T N ++E ++ ++ Y Sbjct: 360 KEEVQIPIDLNSNNKIDIFGNNINKLPNNTELLKNIGIKEKNTLENNNDFYTSKQNEIYY 419 Query: 419 ISQTTDGL--VIVDQHAAHERLIFEKMRQ----DFNSTKITSQTLLTPEIIDLLEGECAL 472 ++ + L D ++ E+ + + + N S + E + Sbjct: 420 ANKNDECLNSCNKDNYSKIEKSLQKDNKNPDILYLNEHNRNSSPINIKENKS---NNFYV 476 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI-----IDEIIDSSTTY 527 M+ + I E+ I + A K + +I I +I+ S Sbjct: 477 DMKIIGQFNNTYILIEK-DKELYIIDQH-AAHEKVLFEKFKCEIEKGYVISQILLSPVVI 534 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 L + ++ ++ +L+ +M N C HGRPT IK L D Sbjct: 535 ELSEDE--------------FNIYEENKDIFKLIEDMLILNNPYTCPHGRPTMIKFTLKD 580 Query: 588 IEKLFGR 594 +EK F R Sbjct: 581 LEKKFKR 587 >gi|289672581|ref|ZP_06493471.1| DNA mismatch repair protein [Pseudomonas syringae pv. syringae FF5] Length = 399 Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats. Identities = 138/378 (36%), Positives = 214/378 (56%), Gaps = 9/378 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGS 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + V+P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S V + + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLYRALGDVRPENQLGGSVPVVAEARPSGPEAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLF 370 + L Q + F Sbjct: 382 GEMRLANNVLEQPQGEPF 399 >gi|148981051|ref|ZP_01816271.1| DNA mismatch repair protein [Vibrionales bacterium SWAT-3] gi|145961027|gb|EDK26350.1| DNA mismatch repair protein [Vibrionales bacterium SWAT-3] Length = 725 Score = 365 bits (936), Expect = 2e-98, Method: Composition-based stats. Identities = 127/415 (30%), Positives = 214/415 (51%), Gaps = 12/415 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLD+ ++R++ I GG ++ DNG Sbjct: 1 MTIKILPARLANQIAAGEVVERPASVVKELVENSLDSGATRIDIDIEKGGAKMIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD I + GFRGEAL SI +V+ LT+ SRP + Sbjct: 61 KGIVKDELALALSRHATSKIHTLDDLEAIVSLGFRGEALASISSVARLTMTSRPATQDQA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT VEV DLFF PAR FL++E+ E I ++++R+A+ Sbjct: 121 WAAHSEGRDMQVKLQPAAHPIGTSVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ + T +RI+ V G F+ + +++ + + L G+ Sbjct: 181 SRFDVTINLRHNGKMIRQYRAAKTEVQAEKRIAAVCGNPFVRHMLKIELEHQGLKLHGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ Y ++NGR ++DK I IR +Y ++ ++ VL +E+DP QVDV Sbjct: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRPDQFATYVLFIELDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL-- 355 NVHPAK +RF ++ +FI Q++ + + ++ +++ S+FHQ AP Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALSDGLAQSKQIDAAPINQ---SAFHQSEAPNYQQDG 357 Query: 356 ----PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 + T+ + + + + + ++ + E +A Sbjct: 358 SIPEAEEMTNFSAPESNVPVHSEQSQVSERVRHAIEQTPAYPRKAESEQAYDQPQ 412 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 93/248 (37%), Gaps = 16/248 (6%) Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 ++ S KK S P + + + F + ++ Sbjct: 459 RQEWIESRPAPKKEKESHQHHAEPAPSKREVSAYKELLKTPGFEHQTVEPSDAKQQVAQT 518 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 SE P + LG A + + + Y++ +G V+V A + ++ D Sbjct: 519 VSSEAELPQSKPRTPVTDLGKAVSIVERQYLMMGNKNGCVLVSLAKAELLRVIGQL--DT 576 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 S + SQ LL P + + + ++ L LGI+ + AI + +P+ L ++ Sbjct: 577 RSGALKSQPLLVPLSLKIGSELVEVAKTLNQPLACLGIELKVRNSEAIMVMGVPSPLRQQ 636 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATM--------ACYGSIRSGRKMQSIEMNR 559 N+ L+ D++ + T++ ++L+ + A ++S + E + Sbjct: 637 NLQILIPDLLSYAASINAQSTVKQP-NDMLSALVNWIGIQTAQ---VKSDYTLS--EAVQ 690 Query: 560 LLREMEKN 567 L+ E+E+ Sbjct: 691 LVGELEQL 698 >gi|187918084|ref|YP_001883647.1| DNA mismatch repair protein MutL [Borrelia hermsii DAH] gi|119860932|gb|AAX16727.1| DNA mismatch repair protein MutL [Borrelia hermsii DAH] Length = 612 Score = 364 bits (935), Expect = 2e-98, Method: Composition-based stats. Identities = 146/620 (23%), Positives = 266/620 (42%), Gaps = 46/620 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L + ++ +IAAGE I+RP ++EL++N++D+ + ++E I GG ITDNG Sbjct: 3 KIKFLDKSLVQKIAAGEAIDRPCSILRELLDNAIDSGADKIEVFIEEGGIRRILITDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKI++ D I T GFRGEAL SI S+LT+ S ++ Sbjct: 63 GISREDLKICYLPHTTSKINEEQDLEKIQTLGFRGEALSSIAICSNLTITSSTTGEDS-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + + GTIV+V +LF PAR FLK + +ET + V A+ + Sbjct: 122 QIEVENGTEKYFKKQSAINGTIVDVTNLFHNFPARKRFLKKDSIETKMCLKVFEEKAVTH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV-ELNEKSNEITLQGYTG 238 P + F + ++ + +R+ V GE NN ++ + I ++ + Sbjct: 182 PGIDFKLNINN----ELRKVYFKESLIDRVQSVYGEIIDNNKFGKIEAEYENIQMKIFFA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P F+R + +F+N R V++K + I ++ + +PV L LEIDPR +D N Sbjct: 238 PPNFSRKDKRNIKIFVNRRPVEEKNLSEAIIDGHSRILTNRNFPVCYLFLEIDPRYIDFN 297 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS-------------------K 339 +HP K +RF N + I +I + ++ Sbjct: 298 IHPQKKEVRFFNLPFLPKQIASNINEFFDRGQKEILQDYHNIIIKRQLTNDDHLLHTEDD 357 Query: 340 KMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV--- 396 S F + N + + + + D P++ + Sbjct: 358 PTNSDFQAYKITQNEALTLDKPQNNKITNIIEDKVKFESQPPTQKDKPSFKNYIQNIFLK 417 Query: 397 ------EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 + + Q+ ++I ++ + + +DQHA HE++I++ + S Sbjct: 418 TSTMLNDLQKPIEKHEFKYIGQLFSEFLIVESDNEVYFIDQHALHEKIIYQIL---IKSE 474 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 KI + L+ E E + ++ E+ ++ I + + IP I +K Sbjct: 475 KIIQKLLVPIEFQVDCEDKDKILASELEEYKKIDITVNKIKEQTYQLESIPNICNKYE-- 532 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 +I + + + + T+ ++ AT+AC +I+ + S L+ E Sbjct: 533 ----SVIIQFLKTRKSKTIDSLEADLYATIACRQAIKRNDTISSEFSQFLINEFFNLKL- 587 Query: 571 SQCNHGRPTFIKLKLSDIEK 590 C HGR + K+ ++EK Sbjct: 588 KHCPHGRKIYHKISKFELEK 607 >gi|330899890|gb|EGH31309.1| DNA mismatch repair protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 423 Score = 364 bits (935), Expect = 2e-98, Method: Composition-based stats. Identities = 138/383 (36%), Positives = 215/383 (56%), Gaps = 9/383 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ G + V+P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A Sbjct: 142 QVETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALA 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V+F ++ + R+S + G F+ A+ + + N + L G+ G Sbjct: 202 RFDVAFHLRHNGKTVLSLHEAHDDTARARRVSAICGPGFLEQALPIEIERNGLHLWGWVG 261 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R A+ Y F+NGR V+DK + +R AY + + GR+P VL E+DP VDVN Sbjct: 262 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVN 321 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPK 352 VHP K +RFR+ ++ +F+ ++ +A+ N+ G S V + + P+ Sbjct: 322 VHPTKHEVRFRDGRMVHDFLYGTLYRALGDVRPENQLGGSVPVVAETRPSGPEAGEFGPQ 381 Query: 353 THLPKYATSLTNTQEKLFLQENR 375 + L Q + F + Sbjct: 382 GEMRLANNVLEQPQGEPFSRPAA 404 >gi|304410913|ref|ZP_07392530.1| DNA mismatch repair protein MutL [Shewanella baltica OS183] gi|307304916|ref|ZP_07584666.1| DNA mismatch repair protein MutL [Shewanella baltica BA175] gi|304350810|gb|EFM15211.1| DNA mismatch repair protein MutL [Shewanella baltica OS183] gi|306912318|gb|EFN42742.1| DNA mismatch repair protein MutL [Shewanella baltica BA175] Length = 637 Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats. Identities = 149/579 (25%), Positives = 258/579 (44%), Gaps = 63/579 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA +SRV+ I GG +I DNG Sbjct: 1 MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK+ DD I +FGFRGEAL SI +VS LTL SR + Sbjct: 61 SGIPKDELALALSRHATSKLHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQTEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + + P A G+ +EV DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAHAEGADMAVKIMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT + + +R++QV G F A+++ + +++ L GY Sbjct: 181 VRGDIHFTLTHNGKTVRNYRPAMNEAQYLQRLTQVSGRPFAEQALKIECQHDDLRLSGYL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + ++ Y ++NGR ++D+ + +R A+A+ P VL+L+IDP QVDV Sbjct: 241 QSPW-SPVISDTHYFYVNGRLIRDRLVNHAVRQAFAQK-AELEQPGYVLMLDIDPHQVDV 298 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--------------------------- 330 NVHPAK +RF + ++I+Q++Q A+ + G Sbjct: 299 NVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELDFVHSSSLDEVEDVFVDAPISATEI 358 Query: 331 ------------------------ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQ 366 +S + K + + + T + + T Sbjct: 359 SAPFVLGADSAQVNVPADTLESAQPLVASAVQVKSAGAGREGASFGTQTNTFGSMATPRD 418 Query: 367 EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE-----ATHYQLGIACAQIHQNYIISQ 421 S + ++ + A + Y + Sbjct: 419 NSRGNYSAGESRQRTELPSKAAIASYGALLQTPSYSVKDQDYQPSLPMPAILDSQYWVMA 478 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 T D L ++ + +++ + +T + Q LL P + A++ EHD + Sbjct: 479 TADKLSLLPIKSVALATRCQEI-EAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIR 537 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 +LG++ + I+++P + + + +++ + + + Sbjct: 538 QLGLELT-IRYQQLIIKKVPPYIRESQLAKVIPEWLQSL 575 >gi|284929131|ref|YP_003421653.1| DNA mismatch repair protein MutL [cyanobacterium UCYN-A] gi|284809590|gb|ADB95295.1| DNA mismatch repair protein MutL [cyanobacterium UCYN-A] Length = 555 Score = 364 bits (934), Expect = 3e-98, Method: Composition-based stats. Identities = 143/601 (23%), Positives = 258/601 (42%), Gaps = 67/601 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L +I++ IAAGEII+ + ++EL++N +DA+S+R+E + +TDNG Sbjct: 4 PIQLLPPEIVSIIAAGEIIDSLASVVRELVDNCIDAKSTRIEISL-NTESWQISVTDNGV 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPP-QNNTG 118 GM+ +++ + H T+KI DD +I + GFRGEAL SI V LT+ SR +++ G Sbjct: 63 GMSLQDLRNCARAHHTNKIHKLDDLCHIRSLGFRGEALFSIANVGQLTIKSRHDIEDSKG 122 Query: 119 AQIAISGEKISSVRPVAMNP-GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 I+ + + V GTI+ + D+F +P R L S + + I +VI +I Sbjct: 123 WCISYNLQGQPVHEKVVAIAPGTIITISDIFGNMPVRRKGLPSFKKQLKAIRNVIENASI 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERI---SQVIGEDFINNAVELNEKSNEITLQ 234 +P +++ + ++ + ++ F ++ V+ + Sbjct: 183 CHPNITWNIKLNGKSWINISPGKNSQQIIPQLLNQINYNDLKFTSSEVKNPSYKSSSINI 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 +R ++ + INGR V+ + I ++ +P GR P+ L L + + Sbjct: 243 VLGLPDRCHRSCSDWVKIAINGRVVRLPQLEQAIIRSFGRCLPKGRSPICFLELYVPFEE 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VD N HP KS + I +Q + +S+SS + H+ Sbjct: 303 VDWNRHPIKSEVYLHFIEFWEEQISNIVQDNLR---LSSSSSIVLGDSERLHKLLKSSIE 359 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 Y+ +D + A Q++ Sbjct: 360 KNDYS--------------------------------YSDNLNSINKLDLLPLKAVGQVN 387 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 + YI+++ +GL +V+QH AHER+++EK++ ++ T I S L+ Sbjct: 388 KTYIVAEHPNGLWLVEQHIAHERILYEKLQDEWKLTTIDS------------PIVVKLLD 435 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAIL-SKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 + L +G++ E FG IR IP +L +KN +L ++ +L+ + Sbjct: 436 HQVKQLQSIGLELEIFGEQMWTIRTIPQLLVGEKNYLDILLEL-----------SLEKNL 484 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 E+ AC +IR+G ++ +M +L + N C HGRP ++ L S + F Sbjct: 485 ESAQVATACKSAIRNGVSLELQKMQEILDGWKNTRNPRTCPHGRPIYLPLDESVLSYFFR 544 Query: 594 R 594 R Sbjct: 545 R 545 >gi|328948043|ref|YP_004365380.1| DNA mismatch repair protein mutL [Treponema succinifaciens DSM 2489] gi|328448367|gb|AEB14083.1| DNA mismatch repair protein mutL [Treponema succinifaciens DSM 2489] Length = 612 Score = 363 bits (933), Expect = 3e-98, Method: Composition-based stats. Identities = 132/623 (21%), Positives = 248/623 (39%), Gaps = 47/623 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +++ L+ ++ +IAAGE+I++P ++E ++N++D+ ++R+ IA GG ++ DNG Sbjct: 6 RVKILNAEVARKIAAGEVIDKPCAIVREFMDNAVDSGATRIRVEIASGGIEKIRVIDNGC 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ H TSKIS D N+ T GFRGEAL SI AVS L + S G Sbjct: 66 GMSKEDLIQCAHPHATSKISTETDLLNLSTLGFRGEALSSIAAVSRLEIKS------GGW 119 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ S + + P A GTI + LF PAR FLK E + + Sbjct: 120 KMNASVTEDHIIEPCASTEGTIAQSSGLFENFPARRQFLKRPASEGIQCRTIFEEKILPR 179 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++FTF + + + + ++ + ++ + + G Sbjct: 180 PDIAFTFVNDGEEKLSLPAGQSLKERFVQTNEFFESSDLFYELKHEDSEKNFSFTLIIGE 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ R + ++++NGR +Q+ ++ I P G +PV L +E++P VD N+ Sbjct: 240 PSVARTSRKDIFIYVNGRKIQEYSLVQAIIYGTQGYFPNGTFPVACLFVEMNPALVDFNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF-------------- 345 HP+K RF++ + + + + + + + + + + + Sbjct: 300 HPSKREARFKDINALHHAVSSTTRNFFKQYTVKSMLTQNAEDKTEAELSNEFSFNSTSIE 359 Query: 346 ----------HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 HQ+N PK + + R S S D + + Sbjct: 360 KNNFVKETFSHQNNIPKINSIYSDVKRGIPRTNFSSSGARQSFFKTKTSQDFFHPMKPNY 419 Query: 396 VEESEATHYQLGIACAQIHQN----YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 + E + ++ +II++ + L I+DQHAAHER+I+ ++ + + Sbjct: 420 IPEISSENFSEYEKGFHFAGCVLGTFIIAEKNETLYIIDQHAAHERMIYNQIMAEAGQKQ 479 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + + + L G + G +P Sbjct: 480 SLLVPYIVQTDSSADDNFIRA---IKDKLEEAGFSCKDCGNGKWEFSTVPIRWKGTEA-D 535 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 L +D++D D I A+ AC ++ G + ++ + + P+ Sbjct: 536 LKKDVLD------RRVNPADMINAAAASTACRSAVMDGTVLDEETAKKIAKGALELPDP- 588 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP + + + L R Sbjct: 589 HCPHGRPVYTTITRQQLFALVKR 611 >gi|54295538|ref|YP_127953.1| DNA mismatch repair protein MutL [Legionella pneumophila str. Lens] gi|53755370|emb|CAH16866.1| DNA mismatch repair protein MutL [Legionella pneumophila str. Lens] Length = 576 Score = 363 bits (933), Expect = 3e-98, Method: Composition-based stats. Identities = 148/569 (26%), Positives = 274/569 (48%), Gaps = 24/569 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +LS I NQIAAGE+IERP+ +KEL+ENSLDA +S + + GG ++DNG Sbjct: 4 RIHQLSPAIANQIAAGEVIERPASVVKELLENSLDAGASVIGVDVNYGGLLQITVSDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+AV H TSKI DD +I + GFRGEAL SI +V+ +T++S+P + + Sbjct: 64 GIFGVDLPLAVAAHATSKIRTLDDLYSIDSMGFRGEALASIASVAKVTIISKPEEQDNAM 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + ++ P A N GT ++V DLF+ P R FLK+E++E I V++R A++ Sbjct: 124 MLRVEG-ENRTLSPCARNIGTTIDVSDLFYNAPVRKRFLKNEKLEFQAIEMVVKRFALSA 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++ T K + + + R+ +++G F+ A+ L+ + + + L G+ Sbjct: 183 PRIALTLKHNKKLIFSLPPALSEQAKAIRMGRILGNTFMREAIFLDVEHSGMRLYGWISN 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R ++ ++++N R V+DK + ++ AY + GR+P+ +L + +VDVNV Sbjct: 243 HRLQRSQNDRQWIYVNQRMVKDKLLQHAVKQAYDGLLHAGRFPICLLYFTLPASEVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RF+ P ++ +F + KA+ + + S +S + P + Sbjct: 303 HPTKHEVRFQQPRLVHDFFTSQLTKAL-QSTLDHSDTREYAYAASSSNEQQNTVSEPSHI 361 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + + E R + + + + S H + +++ +I+ Sbjct: 362 CNDRESHEAA-----RALSPSWSANSLSSSVTSKGYKKTSSVYHPETEFQWVILNERFIL 416 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + D A + I +++ Q + S+ LL L + + Sbjct: 417 VFIKQRPYLADLVALFQEWIEKQLMQKAL--PLESRPLLISIRYPLPNQWIHKPEQLKRE 474 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L R+GI+ E + + IR IP ++ + +I+ E+ T E ++A Sbjct: 475 LARVGIQIEYSNADDLLIRSIPLNAPYLDVRRFF-NILCELDFFDT--------EQLIAL 525 Query: 540 MACYGSIRSGRKMQSI---EMNRLLREME 565 ++ I +++ EMN++L E+ Sbjct: 526 IS-RSQIFDPKQLTVEERIEMNQVLLELS 553 >gi|213421364|ref|ZP_03354430.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 322 Score = 363 bits (933), Expect = 4e-98, Method: Composition-based stats. Identities = 127/322 (39%), Positives = 186/322 (57%), Gaps = 4/322 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I ++IRR+A+ Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A V+ S + + +G R+ + G F+ A+ + + ++TL+G+ Sbjct: 181 ARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWV 240 Query: 238 GIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P Y ++NGR ++D+ I IR A + + + P VL LEIDP QVD Sbjct: 241 ADPNHTTTALTEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD 300 Query: 297 VNVHPAKSYIRFRNPTIIRNFI 318 VNVHPAK +RF ++ +FI Sbjct: 301 VNVHPAKHEVRFHQSRLVHDFI 322 >gi|254498702|ref|ZP_05111419.1| DNA mismatch repair protein MutL [Legionella drancourtii LLAP12] gi|254352082|gb|EET10900.1| DNA mismatch repair protein MutL [Legionella drancourtii LLAP12] Length = 545 Score = 363 bits (932), Expect = 4e-98, Method: Composition-based stats. Identities = 151/521 (28%), Positives = 256/521 (49%), Gaps = 44/521 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L I NQIAAGE+IERP+ +KEL+ENSLDA + + I GG + +I+DNG Sbjct: 4 RIHQLPALIANQIAAGEVIERPASVVKELLENSLDAGADAITVEIGYGGLNQIKISDNGV 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++P+A+ H TSKI+ +D I + GFRGEAL SI +V+ +++ S+P + +T Sbjct: 64 GIVADDLPLAIAAHATSKINTLNDLYAIDSMGFRGEALASIASVAKVSISSKPAEQDTAM 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + +++ P A GT ++V DLFF P R FLKSE++E I V++R A+A Sbjct: 124 MLRVHGME-TTLSPCARTQGTTIDVVDLFFNAPVRKRFLKSEKLEFQAIETVVKRFALAA 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++ T + S RI++++G F+ A+ L+ + + L G+T Sbjct: 183 PGIALTLKHNGKQVLSLPAASNEQAQLTRITRILGSAFVKEAIYLDVERGVMRLYGWTSG 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 F R ++ +V+IN R V+DK I I+ AY + + GR+P +L L ID +VDVNV Sbjct: 243 ANFQRSQNDRQWVYINQRMVKDKLINHAIKQAYGDLLHPGRFPSCLLYLTIDRAEVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RF+ P ++ +F + A+ + + + + Sbjct: 303 HPTKHEVRFQQPRLVHDFFTSQLTAAL-------------RAEPQANTEEPYALVAHEQT 349 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 ++ +LF R + D+ + ++ Y++ Sbjct: 350 KAICEPYPQLFALTPRSAPVDVE-------------------------VPWVSLNSQYLL 384 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + IVD A + L+ E++ + + S+ LL P + I E + Sbjct: 385 AFIQQQPYIVDVFALQKYLLQEQL--TQQNLPLASRPLLVPIRYTITPHLRQKITELSYN 442 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 L +LGI E G N + IR IP + ++ +L D + + Sbjct: 443 LSQLGILLELSGENEVLIRTIPLSIPYLDL-RLFLDAVATL 482 >gi|238898487|ref|YP_002924168.1| enzyme in methyl-directed mismatch repair [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466246|gb|ACQ68020.1| enzyme in methyl-directed mismatch repair [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 590 Score = 363 bits (932), Expect = 4e-98, Method: Composition-based stats. Identities = 155/584 (26%), Positives = 272/584 (46%), Gaps = 29/584 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++++E I GG QI DNG Sbjct: 1 MPIKILPTELANQIAAGEVVERPASVVKELVENSLDAGATKMEIDIHRGGIEQIQICDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ E++P+A+ RH T KI+ +D +I + GFRGEAL SI +VS L L SRP + Sbjct: 61 CGISKEDLPLALARHATDKIASLEDLQSILSMGFRGEALASISSVSRLQLTSRPAEQEDA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +++P + G+ +EV +LF+ PAR FL++E+ E I +V+RR+A+ Sbjct: 121 WQAYTEGRDMNVTIKPASHPVGSTIEVLNLFYNTPARRKFLRTEKTEWQYIDEVVRRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS + S + + R+ ++ G F+ A+ L+ + ++L+G+ Sbjct: 181 SRFDVSISLSHNGKLLRQYVRVQSGSQRERRLLRLCGAPFLKQALALSFDHSGLSLKGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 Y FIN R ++D+ I +R AY + P VL L+IDPRQ+DV Sbjct: 241 A-EANGPKMNEIQYFFINRRIIRDRVINHAVRQAYEAISTGPKNPSYVLYLDIDPRQIDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RF ++ +FI +I A++ S+S + + +PK Sbjct: 300 NVHPTKQEVRFHQTRLVHDFIYHAITNALSHSACSSSDSSADIEQNDSVVKESPKIRKEN 359 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES---EATHYQLGIACAQIH 414 A++ NT + + + L D +++ E + + + Sbjct: 360 RASAGRNTYVEPDIITKQTDEASLSFHDTSRTEHKETSLKKDILGEVNEHYFWRVLSIVS 419 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Y + + + + ++ A + +K+ S K Q LL P L + E Sbjct: 420 SCYALIEYGNNIALLSLPEADR--LLKKVGLTPPSEKSRIQPLLIPVKFTLEKAEMMACE 477 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 H L +GI+ + +R I L N+ +L+ ++ + + ++ + Sbjct: 478 RHQHLLTLIGIELVIEKDTTV-LRGISLALRAHNMQKLIPKLLVYLSEH-APLLPENLAD 535 Query: 535 NILATMACYGSIRSGRKM----QSIEMNRLLREMEKNPNSSQCN 574 + A + + + + +LL + E+ C Sbjct: 536 WVAAQL---------QSLPHEWTVSQAVQLLTDFER-----YCP 565 >gi|261749184|ref|YP_003256869.1| putative DNA mismatch repair protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497276|gb|ACX83726.1| putative DNA mismatch repair protein [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 588 Score = 363 bits (932), Expect = 4e-98, Method: Composition-based stats. Identities = 152/597 (25%), Positives = 276/597 (46%), Gaps = 19/597 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L +K+INQIAAGE+I+RPS +KEL+ENS+DA++ ++ I GK+ Q+ DNG Sbjct: 5 SIQLLPKKVINQIAAGEVIQRPSSVLKELMENSIDAKAKMIDVFIRDSGKTLIQLIDNGN 64 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ + M+ QR+ TSKI ++D I T GFRGEAL SI +S L + ++ +N G Sbjct: 65 GMSFNDARMSFQRYTTSKIKTNEDLFRIRTKGFRGEALASIAFISELEIQTKNKENVMGF 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I KI P+ M GT + V+++F+ IPAR FLKS ++E I + ++ +A+ Sbjct: 125 HLFIEEGKIKKQIPINMLQGTRISVKNIFYKIPARRRFLKSSRIEFKHIVNEFYKIVLAH 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + + F + F + +RI ++ + + K + I ++G+ Sbjct: 185 RDIVYRFYHNDK----ILFSFKKASLKDRIQEIF-SKKNKILIPIIIKKSRILIEGFVSH 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P ++F+N R++ + F+ I +AY + + + + IDP V+ N+ Sbjct: 240 PDAYVQRKGDQFLFVNQRSITNNFLHRKILSAYDGILKNLKTVSYFIFIHIDPSLVNWNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K + ++ N I Q I+ + + L+ S + L + Sbjct: 300 HPTKKEAKLEEEDLVGNMIQQEIKNVLCCQYKVKKEDLNHSDFSFSCNSSKEPFFLMNHY 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI---HQN 416 S E L ++ + +L+ + + + +++ + Sbjct: 360 NSFF---EDLSYKKKVIQLENLIQKMKKSDFFIDIHFTKKLSSYVSNEKDIKTFQINGKY 416 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 I + L++VDQH AH+ ++FE K+ SQ L P + LL+ E + Sbjct: 417 IIFPWKEENLILVDQHRAHQNILFE-FFFQKRKKKLISQQFLFPIEVRLLKHELNSLNNI 475 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 +DL +G F + + IP + + +L +I I+ + ++ + + Sbjct: 476 KDDLIEMGFHL-YFCKKSAYLYSIPEKIHQ----NILVEIFHNILTYNFAKGEKNNKKIL 530 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + ++A +I+ G K+ S +M L+R+ N+S G P F L + ++K F Sbjct: 531 IKSIAQSAAIKYGTKLHSNKMKCLIRDFFSCENTSYTYTGDPVFFVLNNNFLKKQFR 587 >gi|86609718|ref|YP_478480.1| DNA mismatch repair protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558260|gb|ABD03217.1| putative DNA mismatch repair protein MutL [Synechococcus sp. JA-2-3B'a(2-13)] Length = 582 Score = 363 bits (932), Expect = 5e-98, Method: Composition-based stats. Identities = 152/595 (25%), Positives = 259/595 (43%), Gaps = 68/595 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L+ + I Q+AAGE+I+ A++EL+EN+LDA+++R++ I + ++ DNG Sbjct: 3 KIQPLNPERIAQMAAGEVIDSLGAALRELLENALDAQATRIQVEIW-PSRWQVRVADNGQ 61 Query: 62 GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 G+ + E+ +RH TSK+ + GFRGEAL S+ + L + +R + G Sbjct: 62 GIPASELEQVARRHTTSKLDG-----CSLGFRGEALHSLARLGSLAIQTRHVSDAHGWLA 116 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 A + ++ +P A GT+V V DLF P R L + +++ A+A+P Sbjct: 117 AYDRQGELIHKQPAATALGTVVTVADLFADWPLRRRALPQTRPLL----TLVQNAALAHP 172 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 VS+ + + + + QV+ + + + + + G+P Sbjct: 173 WVSWQVHQEGQLLLSLW---PGKSLQDLLLQVLPQVDPTDLRYRRIQDGDSDWEVVLGLP 229 Query: 241 -TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 +R + + V +NGR VQ I++ + +P R+P+VV+ L + P QVD N Sbjct: 230 DRLHRPHPDWIRVAVNGRFVQMPDWQRLIQSVFHHALPRHRHPLVVVHLRLPPEQVDWNR 289 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAKS + N T + + Q + + S + + Sbjct: 290 HPAKSELYLENLTARQEQLRQHLHSLLQLGSGQAS----------------------RRS 327 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L E + LP D S A AQ+H+ YI+ Sbjct: 328 VHLIRASEAKVVYRVSPDFQSHLPPSDRPTSPLPP------------LRALAQLHRIYIL 375 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ GL +V+QH AHER+ +E +RQ + + L E Sbjct: 376 AEHPQGLWLVEQHLAHERVRYEYIRQHWQLVAPETPITLQGLSPQA-----------LER 424 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L +LG++ E FGPN IR IP L ++ ++ +++ S LQ T Sbjct: 425 LEQLGLEPEPFGPNTHLIRRIPLALGSEDPE----EVQGSLLELSGCQDLQ----AAQVT 476 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC G++R+G + +M +LL ++ N C HGRP ++ L D+ + F R Sbjct: 477 VACRGALRNGIPLTLEQMQKLLEAWQRTANPHTCPHGRPVYLALAERDLARYFRR 531 >gi|317498493|ref|ZP_07956787.1| DNA mismatch repair protein MutL [Lachnospiraceae bacterium 5_1_63FAA] gi|316894186|gb|EFV16374.1| DNA mismatch repair protein MutL [Lachnospiraceae bacterium 5_1_63FAA] Length = 495 Score = 363 bits (932), Expect = 5e-98, Method: Composition-based stats. Identities = 138/496 (27%), Positives = 233/496 (46%), Gaps = 44/496 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L +K I+ IAAGE+IERP+ +KEL+EN++DA+++ V I GG + ++TDNG Sbjct: 3 KIQLLDQKTIDNIAAGEVIERPASVVKELVENAVDAKANAVTVEIKDGGMTLIRVTDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A RH TSKI +D ++ + GFRGEAL SI AV+ + L+++ ++ +G Sbjct: 63 GIPKDQVKTAFLRHATSKIRSVEDLLSVSSLGFRGEALSSISAVAQVELVTKTAESFSGV 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I G + + + GT V++LF+ PAR FLKS E + ++ +A+++ Sbjct: 123 SYKIYGGEEEAFDDIGAPDGTTFLVKNLFYNTPARRKFLKSATTEAGYVEQMMVHIALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF F N+ + S NG + I + G D + L ++ ++ + G+ Sbjct: 183 PEISFKFIHNNKNK---IYTSGNGKVKDIIYHIYGRDVAGALIPLEAQNEDVKVTGFVAK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +RGN N FINGR ++ I I Y RYP V L +I+ +DVNV Sbjct: 240 PYVSRGNRNYESYFINGRYIKSSIIYKAIEEGYRTFTMKHRYPFVCLDFKINQELLDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS------------------------- 334 HP K IRFRN I ++ +++ A+ +K + Sbjct: 300 HPTKMEIRFRNGREIYELVVDAVRAALLQKDLVQDVLRETPKKKELPKTKEVKKPEPFEV 359 Query: 335 ----------SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 + + + + P P + S NT++ + N + P Sbjct: 360 NRRKEEVQKVDQQGQGVQQQVEKPSHPVKKTPTASESSKNTKKPTYAGLNYNTQKKEFPQ 419 Query: 385 DDPTYSEDNDPVEESEA----THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 N + Q+ + Y + + D L I+DQHAAHE++ + Sbjct: 420 YKTDELSSNQMTLREDPVFSVQARPDRKILGQLFKTYWLIEYEDQLFIMDQHAAHEKVNY 479 Query: 441 EKMRQDFNSTKITSQT 456 E++ ++F K T++ Sbjct: 480 ERLMKNFKEKKYTARD 495 >gi|330445000|ref|ZP_08308654.1| DNA mismatch repair protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328493118|dbj|GAA03151.1| DNA mismatch repair protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 731 Score = 363 bits (931), Expect = 5e-98, Method: Composition-based stats. Identities = 125/351 (35%), Positives = 192/351 (54%), Gaps = 3/351 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGSRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 KGIPKDELSLALSRHATSKITTLDDLEAIVSLGFRGEALASISSVSRLTLTSRTEAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT +EV DLFF PAR FL++E+ E N I ++I+R+A+ Sbjct: 121 WSAYAEGRDMEVQLKPAAHPVGTTLEVLDLFFNTPARRKFLRTEKTEFNHIDELIKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ T + T+ R++ G F+ +A+ + ++ L G+ Sbjct: 181 SRFDVAITLRHNGKIIRQYRAAQTDIQKERRLATACGSGFLQHALVVELAHGDLKLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 R + Y ++NGR ++DK I IR AY ++ +Y VL +++DP QVDV Sbjct: 241 CSSQGARAQNDIQYCYVNGRMMKDKLINHAIRQAYESSLRADQYAAYVLYIDVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 NVHPAK +RF ++ +FI Q++Q A+ + + + + Q Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALQSALQQGALEEDQHHYQSPTRASAQS 351 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 43/282 (15%), Positives = 99/282 (35%), Gaps = 19/282 (6%) Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 H R+P ++ + + + + S+ +S + P+ P Sbjct: 429 HSTPYQPSQRDPREHHSYEHNASKSRSGNYESQSYAGTSQAKSASSSRPVQPEGPTPAEI 488 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL------------G 407 + E E + T + S+ + + + G Sbjct: 489 KAYQQLLETEAPAETQQVTPEARSSESRVAEPRREWQATAPQPVVSVKQNALGGKATGLG 548 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 A + + Y++ +V++ E L + + + + Q LL P + + Sbjct: 549 KALCLVDERYLLMHQDPQVVLLSLD-KAEHLRYIGQFRLAQTEGLKPQPLLIPLSVPVEG 607 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 A +H L +LGI+ + G N I I + L ++N+ QL+ +++ ++ S Sbjct: 608 DLIACAEQHATLLKQLGIQLKAKGKNGIIIMSVCMPLRQQNLQQLIPNLLTYLLAVSEDQ 667 Query: 528 TLQDRIENILATMA--CYGSIRSGRKMQSIEMNRLLREMEKN 567 Q + +L +A C + + + + +L+ E+E+ Sbjct: 668 EAQGW-DKLLNWLAEQCISPV-ANYSLS--QAIQLVSELEQL 705 >gi|238899349|ref|YP_002925031.1| enzyme in methyl-directed mismatch repair [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229467110|gb|ACQ68883.1| enzyme in methyl-directed mismatch repair [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 590 Score = 363 bits (931), Expect = 5e-98, Method: Composition-based stats. Identities = 155/584 (26%), Positives = 273/584 (46%), Gaps = 29/584 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++++E I GG QI DNG Sbjct: 1 MPIKILPTELANQIAAGEVVERPASVVKELVENSLDAGATKMEIDIHRGGIEQIQICDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ E++P+A+ RH T KI+ +D +I + GFRGEAL SI +VS L L SRP + Sbjct: 61 CGISKEDLPLALARHATDKIASLEDLQSILSMGFRGEALASISSVSRLQLTSRPAEQEDA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +++P + G+ +EV +LF+ PAR FL++E+ E I +V+RR+A+ Sbjct: 121 WQAYTEGRDMNVTIKPASHPVGSTIEVLNLFYNTPARRKFLRTEKTEWQYIDEVVRRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS + S + + R+ ++ G F+ A+ L+ + ++L+G+ Sbjct: 181 SRFDVSISLSHNGKLLRQYVRVQSGSQRERRLLRLCGAPFLKQALALSFDHSGLSLKGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 Y FIN R ++D+ + +R AY + P VL L+IDPRQ+DV Sbjct: 241 A-EANGPKMNEIQYFFINRRIIRDRVVNHAVRQAYEAISTGPKNPSYVLYLDIDPRQIDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RF ++ +FI +I A++ S+S + + +PK Sbjct: 300 NVHPTKQEVRFHQTRLVHDFIYHAITNALSHSACSSSDSSADIEQNDSVVKESPKICKEN 359 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES---EATHYQLGIACAQIH 414 A++ NT + + + L D +++ E + + + Sbjct: 360 RASAGRNTYVEPDIITKQTDEASLSFHDTSRTEHKETSLKKDILGEVNEHYFWRVLSIVS 419 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Y + + + + ++ A + +K+ S K Q LL P L + E Sbjct: 420 SCYALIEYGNNIALLSLPEADR--LLKKVGLTPPSEKSLIQPLLIPVKFTLEKAEMMACE 477 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 H L +GI+ + +R I L N+ +L+ ++ + T L++ + Sbjct: 478 RHQHLLTLIGIELVIEKDTTV-LRGISLALRAHNMQKLIPKLLLYLSAHDT-LLLENFAD 535 Query: 535 NILATMACYGSIRSGRKM----QSIEMNRLLREMEKNPNSSQCN 574 + + + + + + +LL + E+ C Sbjct: 536 WVASQL---------QSLPHEWTVSQAVQLLTDFERC-----CP 565 >gi|114048922|ref|YP_739472.1| DNA mismatch repair protein [Shewanella sp. MR-7] gi|123030290|sp|Q0HR40|MUTL_SHESR RecName: Full=DNA mismatch repair protein mutL gi|113890364|gb|ABI44415.1| DNA mismatch repair protein MutL [Shewanella sp. MR-7] Length = 644 Score = 363 bits (931), Expect = 6e-98, Method: Composition-based stats. Identities = 148/586 (25%), Positives = 253/586 (43%), Gaps = 70/586 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIEIDKGGSKLIKIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK+ DD I +FGFRGEAL SI +VS LTL SR + Sbjct: 61 SGIPKDELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQTEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + V P A G+ +EV DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAYAEGVDMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT + + +R++QV G F + A+ + + +++ L GY Sbjct: 181 VRGDIHFTLTHNGKTVRNYRPAMNEPQYLQRLTQVAGRQFADEALRVECQHDDLRLSGYL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++NGR V+D+ + +R A+A+ P VL+L+IDP QVDV Sbjct: 241 QSPW-STVLTDTHYFYVNGRLVRDRLVNHAVRQAFAQK-AEVEQPGYVLMLDIDPHQVDV 298 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH-----QDNAPK 352 NVHPAK +RF + ++I+Q++Q A+ + G + ++ + Sbjct: 299 NVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELGFERPFEPSSPQVRDEVSLSESGAQ 358 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 T +A L + + K + S D ++ S + + +T G+ Sbjct: 359 TQTEHHAFELQSPESKTHSTWDEASRVDTSRAEISRDSSLGERTRDIASTRPYAGVQSNA 418 Query: 413 IHQNYIISQTTDGLVIVDQHAAHE-------RLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 + ++ G + A E E ++ + + + L Sbjct: 419 YGSMAVPRESRSGST-GESRARAELPSKVAIASYGELLQTPSYNVQDKPYQPVLAMPAIL 477 Query: 466 LEGECALIME-------------------------------------------------- 475 L E Sbjct: 478 NGQYWVLAQEQNLSLLPIQSVALATRSHEIETKLATGLIGQPLLMPVSIAADTDWPALLE 537 Query: 476 -HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 H+ + +LG++ + I+++P L + +++ + + + Sbjct: 538 EHETLIRQLGLELT-IRYQQLIIKKVPPYLRDSQLAKVIPEWLQSL 582 >gi|269103609|ref|ZP_06156306.1| DNA mismatch repair protein MutL [Photobacterium damselae subsp. damselae CIP 102761] gi|268163507|gb|EEZ42003.1| DNA mismatch repair protein MutL [Photobacterium damselae subsp. damselae CIP 102761] Length = 687 Score = 362 bits (930), Expect = 7e-98, Method: Composition-based stats. Identities = 136/428 (31%), Positives = 215/428 (50%), Gaps = 8/428 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIDKGGSRTIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKIS DD I + GFRGEAL SI +V+ LTL SR + Sbjct: 61 KGIPKDELGLALSRHATSKISSLDDLEAIMSLGFRGEALASISSVARLTLTSRTAEQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ +P A GT VEV DLFF PAR FL++E+ E I ++I+R+A+ Sbjct: 121 WSAYAEGRDMAVQLKPAAHPVGTTVEVLDLFFNTPARRKFLRAEKTEFAHIDELIKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ T + T R++ G+ F+ +A+ + ++ L G+ Sbjct: 181 SRFDVNITLRHNGKVIRQYRVAQTQAQKERRLATACGQGFLQHALVVELTHGDLKLSGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 + R + Y ++NGR ++DK I IR AY ++ +Y VL ++++P VDV Sbjct: 241 CSSSGARSQNDIQYCYVNGRMMKDKLINHAIRQAYESSLAPEQYAAYVLFIDLNPHDVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG-----ISTSSVLSKKMISSFHQDNAPK 352 NVHPAK +RF ++ +FI Q IQ A+ + S + +K I S + +A Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQGIQSALQQSDDFIEIQSPQRLSAKANIDSEYSHHAVP 360 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 + + K ++ R T+ S N S+ + G Sbjct: 361 DATYQAIEQTPDYPNKQPAKQWREQTHYETGSTKTAREISNHSQPPSDYRSEKQGAIINT 420 Query: 413 IHQNYIIS 420 ++Y + Sbjct: 421 PSRHYGTT 428 Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 95/253 (37%), Gaps = 9/253 (3%) Query: 317 FIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL 376 II + + S ++++ + + + A L T + + Sbjct: 416 AIINTPSRHYGTTNYRAEGGPSPAEVAAYQRLIQTPDAVEERA--LDTTFNDAHMNSPTV 473 Query: 377 STNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + +++ P+ E + LG A + + Y++ L ++ A Sbjct: 474 TESNVWQEYAPSMPEPIRQHSSVSSEVEGLGKALVIVEKQYLVVSRNQNLALLSLEVAQN 533 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 I +++ S + Q LL P I + +H L +LGI+ + G ++ Sbjct: 534 LRIQGQLKLA-QSEGLKPQPLLIPHSIPVSPELLESAQQHQALLQKLGIQLKAKGKQSLI 592 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ--DRIENILATMACYGSIRSGRKMQS 554 I + L ++N+ QL+ +++ + + T Q D++ + A C + + + Sbjct: 593 IMSVCMPLRQQNLQQLIPNLLTYLGSIAEDPTQQGWDKLLDWFAQQ-C---VVAQEQYSL 648 Query: 555 IEMNRLLREMEKN 567 + +L+ E+E+ Sbjct: 649 SQAIQLVTELEQL 661 >gi|119953008|ref|YP_945217.1| DNA mismatch repair protein MutL [Borrelia turicatae 91E135] gi|254766160|sp|A1QZ05|MUTL_BORT9 RecName: Full=DNA mismatch repair protein mutL gi|119861779|gb|AAX17547.1| DNA mismatch repair protein MutL [Borrelia turicatae 91E135] Length = 612 Score = 362 bits (930), Expect = 7e-98, Method: Composition-based stats. Identities = 149/620 (24%), Positives = 269/620 (43%), Gaps = 46/620 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L ++ +IAAGE I+RP ++EL++NS+D+ + ++E + GG ITDNG Sbjct: 3 KIKFLDRSLVQKIAAGEAIDRPCSILRELLDNSIDSGADKIEVFLEEGGIRRILITDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKI++ D I T GFRGEAL SI S+LT+ S ++ Sbjct: 63 GISKEDLKICYLPHTTSKINEEKDLEKIQTLGFRGEALSSIAICSNLTITSSTTGEDS-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI + + + GTIV+V +LF PAR FLK + +ET + V A+ + Sbjct: 122 QIEVENGTEKYFKKQSAINGTIVDVTNLFHNFPARKRFLKKDSIETKMCLKVFEEKAVTH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV-ELNEKSNEITLQGYTG 238 P + F S ++ + R+ V GE NN ++ + + ++ + Sbjct: 182 PGIDFKLSLNN----ELRKVYFKESLINRVQSVYGEIIENNKFGKIETEYENVQMKIFFA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P F+R + +F+N R V++ + I ++ + +P+ L LEIDPR VD N Sbjct: 238 PPNFSRKDRRNIKIFLNRRPVEEHNLSEAIIDGHSRILTNRNFPICYLFLEIDPRYVDFN 297 Query: 299 VHPAKSYIRFRN--------PTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 +HP K +RF N + I F + ++ + H ++ Sbjct: 298 IHPQKKEVRFFNLPFLPKQVSSNINEFFDRERKEILQDYHNIIIKRQITNDAHLLHPEDD 357 Query: 351 PKTHLPKYATSLTNTQEKLFLQEN-----------RLSTNDLLPSDDPTYSEDNDPV--- 396 P + + N L +N + + + + D P++ + Sbjct: 358 PTNSDFQTYEIIQNESLILDKPQNNKITNIIEDKVKFESQNPIQKDKPSFKSYIQNILLE 417 Query: 397 ------EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 + + Q+ ++I + + + +DQHA HE++I++ + NS Sbjct: 418 TSTIANDFQKPIAKHEFKYRGQLFSEFLIVEKDNEVFFIDQHALHEKIIYQTL---INSE 474 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 KIT + L+ E E ++ E+ +L I + + IP I +K Sbjct: 475 KITQKLLIPIEFQVDCEDTDKILASELEEYKKLDIIVTKIKEQTYQLESIPNICNKYE-- 532 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 ++I + + + T+ ++ AT+AC +++ + S L+ E Sbjct: 533 ----NVIIQFFKTRKSKTIDSLETDLYATIACRQAVKCNDTISSEFSQFLINEFFNLKL- 587 Query: 571 SQCNHGRPTFIKLKLSDIEK 590 C HGR + K+ ++EK Sbjct: 588 KYCPHGRKIYHKISKFELEK 607 >gi|94985638|ref|YP_605002.1| DNA mismatch repair protein MutL [Deinococcus geothermalis DSM 11300] gi|94555919|gb|ABF45833.1| DNA mismatch repair protein MutL [Deinococcus geothermalis DSM 11300] Length = 549 Score = 362 bits (930), Expect = 7e-98, Method: Composition-based stats. Identities = 146/598 (24%), Positives = 243/598 (40%), Gaps = 72/598 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L I IAAGE++ RP ++EL+EN+LDA ++R+E + GGG + ++ DNG Sbjct: 1 MTIHLLPPHIARLIAAGEVVSRPLDVVRELVENALDAGATRIEVEVEGGGLTLVRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI---SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+ ++ + +A RH TSK+ + + T GFRGEAL + L L++RP Sbjct: 61 AGIAADSVALAPVRHATSKLTPEATAVERVSTLGFRGEALWAAAQAGELQLVTRPA-AQV 119 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 GA + + +VR + GT V V +LF +PARL VE IT ++ R + Sbjct: 120 GAAEVRAAGEAVTVRRTSAPAGTTVTVCNLFAHLPARLRTQAPPAVEVREITALVSRYVL 179 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +P + + R + ++ V G N + + + ++G Sbjct: 180 HHPGLHWRLLVDGEARLT----HAPADHRGAVASVYGPLSANRVLRVEAE----GVRGVV 231 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFI-LSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P R ++ + +NGR + + +AE +P G P+ VL L + P + Sbjct: 232 SRPELTRARRDRMHFSVNGRPILAPPELEKAVIEGFAELLPAGVAPLCVLDLTVAPEDHN 291 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 NVHPAK + + G++ + + H L Sbjct: 292 PNVHPAKQVVALADL-----------------PGVAARVRAAVAEALAAHPLARVAPALI 334 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 F + Sbjct: 335 APPEPQATPTRGAFPA----------------------------------LTLVGVYQEL 360 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y+++Q L IVD HAAHER ++E++ ++ L PE++ L + A + E Sbjct: 361 YLLAQGEGDLWIVDAHAAHERALYERLTRELAEAPP--FELPEPELLHLTPEQVARLHER 418 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 DL G+ E FG +R +PA L+ +P+L II+ + S D ++ Sbjct: 419 AADLRAWGLTLEDFGAGLARLRTLPAALAALPVPRLHEQIIEAALGDS-----PDPRRDV 473 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LA +AC ++++G + + +L + C HGRPT ++L D+ FGR Sbjct: 474 LARLACAPALKAGM-LDAGRGESVLAALAGCEQPWSCPHGRPTVLRLSERDLAHAFGR 530 >gi|126659074|ref|ZP_01730214.1| DNA mismatch repair protein [Cyanothece sp. CCY0110] gi|126619602|gb|EAZ90331.1| DNA mismatch repair protein [Cyanothece sp. CCY0110] Length = 554 Score = 362 bits (929), Expect = 9e-98, Method: Composition-based stats. Identities = 153/586 (26%), Positives = 262/586 (44%), Gaps = 66/586 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR LS +I+N IAAGE+I+ + ++EL+EN++DA+++R+ I ++ DNG Sbjct: 4 PIRLLSSEIVNLIAAGEVIDSLAAVVRELVENAIDAKATRLTISIF-PELWQVEVADNGR 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPP-QNNTG 118 G++ E + + H TSKI DD I + GFRGEAL SI V LT+ SR G Sbjct: 63 GISLENLRHCAKAHHTSKICDLDDLWKITSLGFRGEALFSITQVGQLTIKSRDATDYQVG 122 Query: 119 AQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 ++ M PGTIV DLF +IP R L + + + I +I M++ Sbjct: 123 WCVDYNQQGEVIKEETSPMAPGTIVTASDLFGSIPVRRQGLPTLKQQLKAIQGIIDNMSL 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFIN-NAVELNEKSNEITLQG 235 +P++++ + ++ T P+ + V D + + E L+ Sbjct: 183 CHPQITWQVHHNHKSWLTISPGKTPQQILPQLLKSVHFHDLQFLSETIVTPSQEEAKLEM 242 Query: 236 YTGIPTFNRGNA-NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G+P + + +NGR V+ + T+ A + T+P GR+PV L +I P + Sbjct: 243 VLGLPDRTSRGRLDWLKIAVNGRVVRSPQLEQTVLAALSRTLPKGRFPVGFLHFKIPPSE 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 +D N HPAK+ I ++ ++ + + I+K + ++ ++ + + Sbjct: 303 IDWNRHPAKTEIYLQSLQFWQDKVTEIIEKVLKLSPLTITTAGQNQRVKKL--------- 353 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 L ENR N +S + A Q++ Sbjct: 354 --------------LKASENR--------------GIYNIASSDSNELEFMKLRAVGQVN 385 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 + YI+++ + GL +V+QH AHER+++E+++ ++ + +LT L Sbjct: 386 KTYIVAEHSQGLWLVEQHIAHERVLYEQIQDEWQLIPVKQAIILT-----------ELSS 434 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 + E L R+ + E FG N AIR IP +L + D D +I+ S L+ Sbjct: 435 KQVEQLERISVDIEPFGDNTWAIRNIPKLLENRE------DSPDALIELSLGGDLETAQV 488 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + AC +IR+G ++ +M LL +K N C HGRP + Sbjct: 489 AV----ACRSAIRNGMVLELTQMQDLLDSWKKTRNPRTCPHGRPIY 530 >gi|315269202|gb|ADT96055.1| DNA mismatch repair protein MutL [Shewanella baltica OS678] Length = 637 Score = 362 bits (929), Expect = 1e-97, Method: Composition-based stats. Identities = 149/579 (25%), Positives = 256/579 (44%), Gaps = 63/579 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA +SRV+ I GG +I DNG Sbjct: 1 MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK+ DD I +FGFRGEAL SI +VS LTL SR Sbjct: 61 SGIPKDELALALSRHATSKLHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + V P A G+ +EV DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + T + + +R++QV G F A+++ + +++ L GY Sbjct: 181 VRGDIHLTLTHNGKTVRNYRPAMNEAQYLQRLTQVSGRPFAEQALKIECQHDDLRLSGYL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + ++ Y ++NGR ++D+ + +R A+A+ P VL+L+IDP QVDV Sbjct: 241 QSPW-SPVISDTHYFYVNGRLIRDRLVNHAVRQAFAQK-AELEQPGYVLMLDIDPHQVDV 298 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--------------------------- 330 NVHPAK +RF + ++I+Q++Q A+ + G Sbjct: 299 NVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELNFVHSSSLDEVEDVFVDAPTSATEI 358 Query: 331 ------------------------ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQ 366 +S + K + + + T + + T Sbjct: 359 SAPFVLGADSAQVNVPADTLESAQPLVASAVQVKSAGAGREGASFGTQTNAFGSMATPRD 418 Query: 367 EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE-----ATHYQLGIACAQIHQNYIISQ 421 S + ++ + A + Y + Sbjct: 419 NSRGNYSAGESRQRTELPSKAAIASYGALLQTPSYSVKDQDYQPSLPMPAILDGQYWVMA 478 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 T D L ++ + +++ + +T + Q LL P + A++ EHD + Sbjct: 479 TADKLSLLPIKSVALATRCQEI-EAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIR 537 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 +LG++ + I+++P + + + +++ + + + Sbjct: 538 QLGLELT-IRYQQLIIKKVPPYIRESQLAKVIPEWLQSL 575 >gi|160876999|ref|YP_001556315.1| DNA mismatch repair protein [Shewanella baltica OS195] gi|189030411|sp|A9L3W1|MUTL_SHEB9 RecName: Full=DNA mismatch repair protein mutL gi|160862521|gb|ABX51055.1| DNA mismatch repair protein MutL [Shewanella baltica OS195] Length = 638 Score = 362 bits (929), Expect = 1e-97, Method: Composition-based stats. Identities = 149/579 (25%), Positives = 256/579 (44%), Gaps = 63/579 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA +SRV+ I GG +I DNG Sbjct: 2 MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRVDIEIDKGGSKLIKIRDNG 61 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK+ DD I +FGFRGEAL SI +VS LTL SR Sbjct: 62 SGIPKDELALALSRHATSKLHTLDDLEAILSFGFRGEALASISSVSRLTLTSRTADQTEA 121 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + V P A G+ +EV DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 122 WQAHAEGADMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + T + + +R++QV G F A+++ + +++ L GY Sbjct: 182 VRGDIHLTLTHNGKTVRNYRPAMNEAQYLQRLTQVSGRPFAEQALKIECQHDDLRLSGYL 241 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + ++ Y ++NGR ++D+ + +R A+A+ P VL+L+IDP QVDV Sbjct: 242 QSPW-SPVISDTHYFYVNGRLIRDRLVNHAVRQAFAQK-AELEQPGYVLMLDIDPHQVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--------------------------- 330 NVHPAK +RF + ++I+Q++Q A+ + G Sbjct: 300 NVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELNFVHSSSLDEVEDVFVDAPTSATEI 359 Query: 331 ------------------------ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQ 366 +S + K + + + T + + T Sbjct: 360 SAPFVLGADSAQVNVPADTLESAQPLVASAVQVKSAGAGREGASFGTQTNAFGSMATPRD 419 Query: 367 EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE-----ATHYQLGIACAQIHQNYIISQ 421 S + ++ + A + Y + Sbjct: 420 NSRGNYSAGESRQRTELPSKAAIASYGALLQTPSYSVKDQDYQPSLPMPAILDGQYWVMA 479 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 T D L ++ + +++ + +T + Q LL P + A++ EHD + Sbjct: 480 TADKLSLLPIKSVALATRCQEI-EAKLATGLIGQPLLMPVSVAADADWQAVLDEHDTLIR 538 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 +LG++ + I+++P + + + +++ + + + Sbjct: 539 QLGLELT-IRYQQLIIKKVPPYIRESQLAKVIPEWLQSL 576 >gi|77359236|ref|YP_338811.1| methyl-directed mismatch repair protein [Pseudoalteromonas haloplanktis TAC125] gi|123587198|sp|Q3IDU0|MUTL_PSEHT RecName: Full=DNA mismatch repair protein mutL gi|76874147|emb|CAI85368.1| Enzyme in GATC methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA [Pseudoalteromonas haloplanktis TAC125] Length = 618 Score = 362 bits (929), Expect = 1e-97, Method: Composition-based stats. Identities = 154/561 (27%), Positives = 259/561 (46%), Gaps = 50/561 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MSIEILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIERGGHKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK+ DD NI + GFRGEAL SI +VS LTL S+ Sbjct: 61 AGIAQDELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKTKHQEAA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + V+PVA GT +EV+DLFF PAR FL++E+ E + I ++I+R+A+ Sbjct: 121 WQAFAQGRDMAVQVKPVAHPDGTTIEVKDLFFNTPARRKFLRTEKTEFSHIDELIKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS T + + + ++ R++QV G+ F + + + L G+ Sbjct: 181 SRFDVSITLTHNEKVVRQYRAKTDPSQAIARVAQVAGKAFAEQGLHIQSGEGGLQLHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 Y ++N R ++DK IL IR A+ E P V+ ++IDPRQVDV Sbjct: 241 LPVGSANTV---QYTYVNNRMMRDKLILHAIRQAFEEVSGAQELPGFVIYIDIDPRQVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINK-KGISTSSVLSKKMISSFHQDNAPKTHLP 356 NVHPAK +RF ++ +FI+Q+I++ + +G T+ L+ ++F Q + ++ Sbjct: 298 NVHPAKHEVRFHQGRLVHDFILQAIKQVVVPLQGEFTNEPLNNLADTAFSQTDTARSPTG 357 Query: 357 KYATSLTNTQEKLFLQEN------------------RLSTNDLLPSDDPTYSEDNDPVEE 398 + + K LQ + + ++ + V E Sbjct: 358 NFESGEVFDYPKSQLQPSHSVSSGGASLGSRSAGGSGGAYRATPSTNHHDINAFYQGVSE 417 Query: 399 SEATHYQLGIA---------------------CAQIHQNYIISQTTDGLVIVDQHAAHER 437 A H+ G I++ + + L A Sbjct: 418 QHAAHFDQGAHVSVGVNQSHAVEQAVALKTVAIISINEGVCVFSSEQQLYCSHFKYALVD 477 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 E+++ + + LL P ++L + +C LI LG + + + Sbjct: 478 DWHEQIK---EQGSLEGKALLLPVRVNLSKQDCELIAAQQSWFTLLGFEL-IIEKQFVMV 533 Query: 498 REIPAILSKKNIPQLLRDIID 518 +++PA L ++ + +++ Sbjct: 534 KKLPACLYLLDVTSAVESLLE 554 >gi|315127883|ref|YP_004069886.1| methyl-directed mismatch repair protein [Pseudoalteromonas sp. SM9913] gi|315016397|gb|ADT69735.1| methyl-directed mismatch repair protein [Pseudoalteromonas sp. SM9913] Length = 608 Score = 362 bits (929), Expect = 1e-97, Method: Composition-based stats. Identities = 151/551 (27%), Positives = 256/551 (46%), Gaps = 40/551 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MSIEILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIERGGHKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK+ DD NI + GFRGEAL SI +VS LTL S+P Sbjct: 61 AGIAKDELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKPENQEAA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + V+PVA GT +EV+DLFF PAR FL++E+ E + I ++I+R+A+ Sbjct: 121 WQAFAQGRDMAVEVKPVAHPSGTTIEVKDLFFNTPARRKFLRTEKTEFSHIDELIKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS T + + + ++ R++QV G+ F + + + L G+ Sbjct: 181 SRFDVSITLTHNEKVVRQYRAKTDPAQAITRVAQVAGKAFAEQGLHIQSGEAGLQLHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 Y ++N R ++DK IL IR A+ E P V+ ++IDPRQVDV Sbjct: 241 LPVGSANTT---QYTYVNNRMMRDKLILHAIRQAFEEVSGEQELPGFVIYIDIDPRQVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI----NKKGISTSSVLSKKMISSFHQDNAPKT 353 NVHPAK +RF ++ +FI+Q+I++ + + S ++ ++SF+Q++ + Sbjct: 298 NVHPAKHEVRFHQGRLVHDFILQAIKQVVVPLQAEFVNSPAAHAHHSPVTSFNQEHTSSS 357 Query: 354 HLPKYATSL--------------------------TNTQEKLFLQENRLSTNDLLPSDDP 387 L Y S +Q + N+ Sbjct: 358 ELFDYPKSSLQPSHSPSTSSASYSGSRQGGGRQVRAESQNYHDVNAFYQGVNEQQAQHFD 417 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 T S P E + + I + + + L A ++++ Sbjct: 418 TASAFLQPNETQVSDTALRTVDIISIEKGVCVFNNENQLYCSHFKYALADDWHTQIKEH- 476 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + + LL P +++ + + AL+ LG + + ++++P L Sbjct: 477 --GSLEGKALLLPVRVNVSKQDTALLAAQQSWFTLLGFEL-LIEKQFVMVKKLPTSLYLL 533 Query: 508 NIPQLLRDIID 518 ++ + +++ Sbjct: 534 DVSAAIDALLE 544 >gi|322800065|gb|EFZ21171.1| hypothetical protein SINV_06397 [Solenopsis invicta] Length = 672 Score = 362 bits (928), Expect = 1e-97, Method: Composition-based stats. Identities = 146/657 (22%), Positives = 278/657 (42%), Gaps = 80/657 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI ++++ I+ I +G+++ +IA+KEL+ENSLD+ ++ ++ + GK+ ++DNG Sbjct: 13 KIEAINKETIHHICSGQVVLDLAIAVKELVENSLDSGATVIDVKLTDYGKTCISVSDNGS 72 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ ++ +H TSK+ + D + ++TFGFRGEAL S+ A+S L++++R + G Sbjct: 73 GVSEQDFEGLGLKHHTSKLREFTDLTEVNTFGFRGEALSSLCALSELSIITRHATSEHGF 132 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 ++ I + P A GT V VR++F +P R F K+ + E V+ + Sbjct: 133 KLEFDRNGILTRKEPYAREKGTTVYVRNIFKNLPVRAKEFQKNLKKEYARAVQVLYSYCL 192 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN------ 229 + T S + + + + I+ V G+ ++ V+L +S Sbjct: 193 VSTNIKITCSNLLAGKSPNLIVTTRNVDDVLSNINSVFGKKSLDGIVKLELQSPDETVLQ 252 Query: 230 ----------EITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIP 277 + + Y G + ++ + ++NGR I + + Y Sbjct: 253 EYNLPSDATVDFDWECYVSTCDHAIGRSSPDRQFFYVNGRPCDLTKISKLVNSVYHRY-N 311 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK--------- 328 + +YP V +++D + DVNV P K I +I + S+ +K Sbjct: 312 IKQYPFVFFNIKLDRQCADVNVTPDKRTIFVTQERLILATLKFSLITKWDKLQGNFTVKT 371 Query: 329 -----------------------KGISTSSVLSKKMISSFHQDNAPKTHLP---KYATSL 362 +S S K + Q N P A S+ Sbjct: 372 LTELNFGLKRTISPNHAHSPAKRLQLSPSVSHIVKENDTTIQTNIKSLKKPTDVNMAISI 431 Query: 363 TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE--------ATHYQLGIACAQIH 414 +EKL ++N + + E+E ++ Q + Sbjct: 432 VTIKEKLNEKQNIATALSSTIKRIKYRVQMEGNQSEAEKELQKELTKDSFEKMEIIGQFN 491 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +II++ D L I+DQHA E+ FEK+ N TK+ +Q L+ P++++ +++ Sbjct: 492 LGFIIARLEDDLFIIDQHATDEKFRFEKL---SNETKLKTQKLIVPKLLNFSALNETILI 548 Query: 475 EHDEDLHRLGIKA---ERFGPN-AIAIREIPAI----LSKKNIPQLLRDIIDEIIDSSTT 526 ++ + G E+ P + + +P +++I +L+ +I E + + Sbjct: 549 DNLQTFENNGFTFNINEQAEPGKKVELIGMPVSGNWQFGQEDIEELIF-LIREAGNENKH 607 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R+ +LA+ AC ++ G + + EM RL+ +M + N C HGRPT L Sbjct: 608 MYRPSRVRQMLASRACRSAVMIGTALNTSEMQRLVTQMTQMYNPWNCPHGRPTIRHL 664 >gi|225567943|ref|ZP_03776968.1| hypothetical protein CLOHYLEM_04016 [Clostridium hylemonae DSM 15053] gi|225163231|gb|EEG75850.1| hypothetical protein CLOHYLEM_04016 [Clostridium hylemonae DSM 15053] Length = 695 Score = 362 bits (928), Expect = 1e-97, Method: Composition-based stats. Identities = 127/397 (31%), Positives = 205/397 (51%), Gaps = 6/397 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L + I++IAAGE+IERP+ +KEL EN++DA ++ + I GG SF +I DNG Sbjct: 3 KIQVLDQVTIDKIAAGEVIERPASVVKELAENAIDAGATSITVEIKEGGISFIRIADNGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P A RH TSKI +D +I + GFRGEAL SI AVS + L+++ + G Sbjct: 63 GIGREDVPSAFLRHSTSKIRSVEDLVHIGSLGFRGEALSSIAAVSQVELVTKTKADTFGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I+G K ++ GT +R LF+ PAR FLK+ E + + +++ R+A+++ Sbjct: 123 SYRIAGGKEEALEDTGAPDGTTFLIRQLFYNTPARRKFLKTPMTEASHVGELVTRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF F ++ S NG+ + I V G + N + +N + + + G+ G Sbjct: 183 PEISFQFINNGQSKVH---TSGNGSLKDVIYHVYGREIAANLLAVNYERTGMKITGFLGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +RGN N FINGR V+ I I AY + +YP VVL +EID +DVNV Sbjct: 240 PLISRGNRNFENYFINGRYVKSNMIAKAIEDAYKDFTMQHKYPFVVLHMEIDGEHIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RF N + N + +++ + ++ + + L + P P+ + Sbjct: 300 HPTKMELRFNNQQDVYNSVYEAVDRGLHAEEMIPHVELPEPP-GGETPSVRPAEQKPEPS 358 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 ++ ++E + + T PV Sbjct: 359 PEKEYAAQRPPVKEPIQQAQPMRETPRQTQPVKEQPV 395 Score = 202 bits (515), Expect = 9e-50, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 134/289 (46%), Gaps = 7/289 (2%) Query: 311 PTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLF 370 + F+ + ++ + ++S+ + K ++ + + + A + Sbjct: 407 QRDVNYFLEEMKKRVRSYHEQNSSAEVQDK--NAIFKPGIQADRIREAAAYAKTDAKADD 464 Query: 371 LQENRLS---TNDLLPSDDPTYSEDNDPVEESEATHYQLGIA--CAQIHQNYIISQTTDG 425 +Q N T+ + ++ D EE + Q+ Y I + D Sbjct: 465 VQRNSAPLKETDSAGKQMESGTAKQMDMFEEKFLDRERKAEYKLVGQVFDTYWIVEFHDS 524 Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L I+DQHAAHER+++E+ ++ + + TSQ + P I+DL E L+ + E ++G Sbjct: 525 LYIIDQHAAHERVLYERTLKNMKTREFTSQYISPPIILDLTMQEAELLTMYMEQFTKVGF 584 Query: 486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 + E FG ++ A+R +P L +LL ++ID + D + D I+ +A+M+C + Sbjct: 585 EIEEFGQDSYAVRAVPDNLFSIAKKELLMEMIDSLSDEISRTLSPDLIDEKVASMSCKAA 644 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ K+ + E++ L+ E+ N C HGRPT I + ++EK F R Sbjct: 645 VKGNMKLSAAEVDTLINELLMLENPYHCPHGRPTIIAMTKRELEKKFKR 693 >gi|89075987|ref|ZP_01162359.1| DNA mismatch repair protein [Photobacterium sp. SKA34] gi|89048336|gb|EAR53915.1| DNA mismatch repair protein [Photobacterium sp. SKA34] Length = 722 Score = 361 bits (927), Expect = 2e-97, Method: Composition-based stats. Identities = 129/447 (28%), Positives = 211/447 (47%), Gaps = 5/447 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGSRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 KGIPKDELALALSRHATSKITTLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQSQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT +EV DLFF PAR FL++E+ E N I ++I+R+A+ Sbjct: 121 WSAYAEGRDMDVQLKPAAHPVGTTLEVLDLFFNTPARRKFLRTEKTEFNHIDELIKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ T + + R++ G F+ +A+ + ++ L G+ Sbjct: 181 SRFDVAITLRHNGKIIRQYRTAQSPIQKERRLATACGSGFLQHALMVELAHGDLKLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 R + Y ++NGR ++DK I IR AY ++ +Y VL +++DP QVDV Sbjct: 241 CSSQGARAQNDIQYCYVNGRMMKDKLINHAIRQAYESSLRSDQYAAYVLYIDVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH--L 355 NVHPAK +RF ++ +FI Q++Q A+ + + + I + + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALQSALQQGALEEEQHQYQSPIRASAHSFEVDEDGVV 360 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 + S+T + L + + S + + A+ Sbjct: 361 IEPINSVTQRVAQAIDATPEYPHKSPLSEWNKSASTPSYSAGSPFESDMHGLAVSAEYAV 420 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEK 442 + + + + ++ Sbjct: 421 SEATEHSISTSYSASPNTNNREHQYDH 447 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 91/252 (36%), Gaps = 9/252 (3%) Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFL--QENRLS 377 Q + + +S +S S + + Y L + + Sbjct: 450 CERQDSDQTVNTTRTSDVSSGASRSPKPEGPTAAEIKAYQKLLQTEAPTKHVLAEHPIEH 509 Query: 378 TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 + S LG A + + Y++ Q + +++ A E Sbjct: 510 VAEPRREWQAMPSNAVVKQHAIAGKAMGLGKALCLVAERYLLMQQDTDIALLNLDHA-EL 568 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 L + + + + Q LL P + + A +H L +LG++ + G N I I Sbjct: 569 LRYVGQLRLAQTEGLKPQPLLIPLSVPVESDLIACAEQHAMLLKQLGVQLKPKGRNGIII 628 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA--CYGSIRSGRKMQSI 555 + L ++N+ QL+ +++ ++ + Q + +L +A C G++ + + Sbjct: 629 MSVCMPLRQQNLQQLIPNLLTYLLTACDDPEAQGW-DKLLYWLAEQCVGTV-ASYSLS-- 684 Query: 556 EMNRLLREMEKN 567 + +L+ E+E+ Sbjct: 685 QAIQLVSELEQL 696 >gi|52842903|ref|YP_096702.1| DNA mismatch repair protein MutL [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52630014|gb|AAU28755.1| DNA mismatch repair protein MutL [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 576 Score = 361 bits (927), Expect = 2e-97, Method: Composition-based stats. Identities = 134/514 (26%), Positives = 251/514 (48%), Gaps = 11/514 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +LS I NQIAAGE+IERP+ +KEL+ENSLDA +S + + GG ++DNG Sbjct: 4 RIHQLSPAIANQIAAGEVIERPASVVKELLENSLDAGASVIGVDVNYGGLLQITVSDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+A+ H TSKI DD +I + GFRGEAL SI +V+ +T++S+P + + Sbjct: 64 GIVGDDLPLAIAAHATSKIRTLDDLYSIDSMGFRGEALASIASVAKVTIISKPEEQDNAM 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + ++ P A N GT ++V DLF+ P R FLK+E++E I V++R A++ Sbjct: 124 MLRVEG-ENRTLSPCARNIGTTIDVSDLFYNAPVRKRFLKNEKLEFQAIEMVVKRFALSA 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++ T K + + + R+ +++G F+ A+ L+ + + + L G+ Sbjct: 183 PQIALTLKHNKKLIFSLPPALSEQAKAIRMGRILGNTFMREAIFLDVEHSGMRLYGWISN 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R ++ ++++N R V+DK + ++ AY + GR+P+ +L + +VDVNV Sbjct: 243 HRLQRSQNDRQWIYVNQRMVKDKLLQHAVKQAYDGLLHAGRFPICLLYFTLPASEVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RF+ P ++ +F + KA+ + ++ SS ++ + Sbjct: 303 HPTKHEVRFQQPRLVHDFFTSQLTKALQSTLDHSETMEYAYAASSCNEQQNTVSEPSHIC 362 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 ++ + R + + + + S H + +++ +I+ Sbjct: 363 N------DRESYEGARALSPSWSDNSLSSSITCKGYKKTSSVYHPETEFQWVILNERFIL 416 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 +VD + I +++ Q + S+ LL L + + Sbjct: 417 VLIKQQPYLVDIVTLFQEWIEKQLMQKAL--PLESRPLLISIRYPLPNQWIHKLDHLKHE 474 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 L R+GI+ E + + IR IP ++ + Sbjct: 475 LTRVGIQIEYPNADDLLIRSIPLNAPYLDVRRFF 508 >gi|218249649|ref|YP_002374736.1| DNA mismatch repair protein MutL [Borrelia burgdorferi ZS7] gi|218164837|gb|ACK74898.1| DNA mismatch repair protein MutL [Borrelia burgdorferi ZS7] Length = 600 Score = 361 bits (927), Expect = 2e-97, Method: Composition-based stats. Identities = 146/613 (23%), Positives = 264/613 (43%), Gaps = 44/613 (7%) Query: 11 INQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 + +IAAGE I+RP ++EL++NS+D+ ++++E + GG I DNG G++ E++ + Sbjct: 2 VQKIAAGESIDRPCSILRELLDNSIDSGATKIEVFLVEGGIQKILIIDNGSGISKEDLKI 61 Query: 71 AVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKI 128 H TSKIS +D I T GFRGEAL SI S++++ S N + QI + Sbjct: 62 CYLPHTTSKISSEEDLRKIETLGFRGEALSSIAICSNISITSSTTSNES-YQIEVENGIE 120 Query: 129 SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFST 188 + GTIV+V +F PAR FLK E +ET + V+ I +P+++F + Sbjct: 121 KCFKKQPAINGTIVDVTKIFHNFPARKRFLKQEPIETKMCLKVLEEKIITHPEINFEINL 180 Query: 189 IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-NEKSNEITLQGYTGIPTFNRGNA 247 + + + +R+ V G NN + ++ + I ++ + F++ + Sbjct: 181 NQK----LRKIYFKESLIDRVQNVYGNVIENNKFRVLKKEHDNIKIEIFLAPDNFSKKSK 236 Query: 248 NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIR 307 F+N R + K +L I ++ + G +P+ L LEI+P +D NVHP K +R Sbjct: 237 RHIKTFVNRRPIDQKDLLEAITNGHSRILSPGNFPICYLFLEINPEYIDFNVHPQKKEVR 296 Query: 308 FRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ--DNAPKTHLPKYATSLTNT 365 F N + I +I +K + ++ K+ ++ + + + Sbjct: 297 FYNLPFLFKLISDNINNFFDKNINNYQDIIIKRQLTEDDHLIEMTNQPENFNKINTYDIP 356 Query: 366 QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG------------------ 407 Q E+ N + N ++ +G Sbjct: 357 QNNNLETEDVNEPNKNTTQSNIDLRRYNSIIQNRPTLRENIGNIFSDNFLEFEEPPNKNE 416 Query: 408 ------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 QI ++I + + + +DQHA HE++I+EK+R NS K + L+ E Sbjct: 417 KEEIKFNYIGQIFSEFLIVEKINEIYFIDQHAVHEKIIYEKLR---NSKKNVQKLLVPIE 473 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 + + +I E+ ++ I + GP + IP I S+ + + Sbjct: 474 FTVVDKNIEEIIDSEIEEYKQMDIIISKIGPKKYQLESIPNICSQYE------NTLINFF 527 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 S + T+ ++ AT+AC +++ + + L+ E K C HGR + Sbjct: 528 QSRRSRTINSLESDLYATIACRKAVKRNDMLSAEFSKFLINEFFKLE-IKHCPHGRKIYY 586 Query: 582 KLKLSDIEKLFGR 594 K+ ++EK R Sbjct: 587 KISKFELEKKVDR 599 >gi|54298688|ref|YP_125057.1| DNA mismatch repair protein MutL [Legionella pneumophila str. Paris] gi|53752473|emb|CAH13905.1| DNA mismatch repair protein MutL [Legionella pneumophila str. Paris] Length = 576 Score = 361 bits (927), Expect = 2e-97, Method: Composition-based stats. Identities = 139/502 (27%), Positives = 248/502 (49%), Gaps = 11/502 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +LS I NQIAAGE+IERP+ +KEL+ENSLDA +S + + GG ++DNG Sbjct: 4 RIHQLSPAIANQIAAGEVIERPASVVKELLENSLDAGASVIGVDVNYGGLLQITVSDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ +++P+AV H TSKI DD +I + GFRGEAL SI +V+ +T++S+P + + Sbjct: 64 GISGDDLPLAVAAHATSKIRTLDDLYSIDSMGFRGEALASIASVAKVTIISKPEEQDNAM 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + ++ P A N GT ++V DLF+ P R FLK+E++E I V++R A++ Sbjct: 124 MLRVEG-ENRTLSPCARNIGTTIDVSDLFYNAPVRKRFLKNEKLEFQAIEMVVKRFALSA 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++ T K + + + R+ +++G F+ A+ L+ + + ++L G+ Sbjct: 183 PRIALTLKHNKKLIFSLPPALSEQAKAIRMGRILGNTFMREAIFLDVEHSGMSLYGWISN 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R ++ ++++N R V+DK + ++ AY + GR+P+ +L + +VDVNV Sbjct: 243 HRLQRSQNDRQWIYVNQRMVKDKLLQHAVKQAYDGLLHAGRFPICLLYFTLPASEVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RF+ P ++ +F + KA+ + + SS + + P + Sbjct: 303 HPTKHEVRFQQPRLVHDFFTSQLTKALQSTLDHSDTREYAYAASSCN-EQQNTVSEPSHI 361 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + + E S N L S + V E + +++ +I+ Sbjct: 362 CNDRESHEGARALSPSWSANLLSSSITNKGYKKTSSVYHPETESQWV-----ILNERFIL 416 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + D + I ++ Q + S+ LL L + + Sbjct: 417 VFIKQQPYLADIVTLFQEWIENQLMQKAL--PLESRPLLISIRYPLPNQWIHKQEQLKHE 474 Query: 480 LHRLGIKAERFGPNAIAIREIP 501 L R+GI+ E + + IR IP Sbjct: 475 LARVGIQIEYPNADDLLIRSIP 496 >gi|219871506|ref|YP_002475881.1| DNA mismatch repair protein [Haemophilus parasuis SH0165] gi|219691710|gb|ACL32933.1| methyl-directed mismatch repair protein [Haemophilus parasuis SH0165] Length = 589 Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats. Identities = 143/531 (26%), Positives = 257/531 (48%), Gaps = 32/531 (6%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 ERP+ +KEL+ENSLDA +++++ I GG +I DNG G+ +++ +A+ RH TSKI Sbjct: 2 ERPASVVKELVENSLDAGATQIQIDIEKGGSQLIRIRDNGCGIGKQDLALALARHATSKI 61 Query: 81 S--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS-SVRPVAMN 137 + +D +I + GFRGEAL SI +VS LTL SRP Q G ++ ++P + Sbjct: 62 ATLEDLESILSLGFRGEALASISSVSRLTLTSRPEYQAEAWQAYAQGREMEVEIKPASHP 121 Query: 138 PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMN 197 GT +EV +LFF PAR FL++++ E I +V+RR+A+A P V+FT + + Sbjct: 122 VGTTIEVANLFFNTPARRKFLRTDKTEFAHIDEVVRRIALAKPNVTFTLTHNEKKVRYYK 181 Query: 198 FQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 +T +R++ + G++FI +V ++ + +++ + G+ G P+ R + Y ++N Sbjct: 182 AVATQQLEQQQKRVATICGDEFIQQSVHIDWQHDDLHIYGWVGSPSLARVQNDLCYSYVN 241 Query: 256 GRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIR 315 GR ++DK I IR AY E +P YP VL L++DP VDVNVHPAK +RF ++ Sbjct: 242 GRMMRDKTINHAIRQAYGERLPKDHYPAFVLFLDLDPSHVDVNVHPAKHEVRFHQSRLVH 301 Query: 316 NFIIQSIQKAINKKGISTSSVLSKKMISSF-----------------HQDNAPKTHLPKY 358 +FI Q + A+ + + + + ++ +++ + Sbjct: 302 DFIYQGVLNALEDQHHLPLTTNVSEALPNYIADTNRVASGQNIFAHSYREPRSTSSTHAE 361 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE-------SEATHYQLGIACA 411 + +NT+ + + +LL + + ++PV++ + Sbjct: 362 RPNYSNTRSSGVSKNEQKWYGELLSTSPMQDYKRSEPVQDLPKTAKITPLVEPIAEPVTP 421 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 ++ Q + + +++ K +Q LL P + L E + A Sbjct: 422 YAQALAVVKQKALLIKQGETFYLLSLEKLAQLKLQAELAKRENQALLIPLSLTLDEQQTA 481 Query: 472 LIMEHDEDLHRLGIKAER---FGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 + L LG + G + I+++P L ++N+ QLL + ++ Sbjct: 482 SWQQSQTALADLGFDIQTKQWQGQTRLTIQKVPTCLREQNLQQLLFSLFNQ 532 >gi|119468156|ref|ZP_01611282.1| Enzyme in GATC methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA [Alteromonadales bacterium TW-7] gi|119448149|gb|EAW29413.1| Enzyme in GATC methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA [Alteromonadales bacterium TW-7] Length = 610 Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats. Identities = 151/553 (27%), Positives = 258/553 (46%), Gaps = 42/553 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MNIEILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIQIEIERGGHKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSK+ DD NI + GFRGEAL SI +VS LTL S+P + Sbjct: 61 SGIGKEELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKPKTQDAA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + V+PVA GT +EV+DLFF PAR FL++E+ E I ++I+R+A+ Sbjct: 121 WQAFAEGRDMAVQVKPVAHPDGTTIEVKDLFFNTPARRKFLRTEKTEFTHIDELIKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS T + + + ++ + R++QV G+ F + + + L G+ Sbjct: 181 SRFDVSITLTHNEKVVRQYRAKTDPAHAITRVAQVAGKAFAEQGLHIQSGEAGLQLHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P + Y ++N R ++DK IL IR A+ E + P V+ ++IDPRQVDV Sbjct: 241 -LPVGSVNTT--QYTYVNNRMMRDKLILHAIRQAFEEVSGVQELPGFVIYIDIDPRQVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKA---INKKGISTSSVLSKKMISSFHQDNAPKTH 354 NVHPAK +RF ++ +FI+Q+I++ + + + + + + +F P T Sbjct: 298 NVHPAKHEVRFHQGRLVHDFILQAIKQVVVPLQGEFNNEAVTTADDHLPAFTHAMHPSTS 357 Query: 355 LPKYATSLTNTQEKL----------------------FLQENRLSTNDLLPSDDPTYSED 392 + + + +L N N ++ Sbjct: 358 KNETSGGYDYPKSQLQPNYSGSSSSTGAKSSGGEYRASSSANHQDVNAFYQGVSEQHAAH 417 Query: 393 NDPVEESEATHY-------QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 D V ++ ++ +H + L A E+++ Sbjct: 418 FDVVAQTTQQDSSVPEQSAVSMVSIISLHDGNCVFSAQQQLFCSHFKYAIVDDWHEQIK- 476 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 + + LL P ++L + +C LI LG + + ++++P+ L Sbjct: 477 --EQGSLEGKALLLPVRVNLSKEDCLLIEGQQSWFTLLGFEL-VIEKQFVMVKKLPSCLY 533 Query: 506 KKNIPQLLRDIID 518 ++ + +++ Sbjct: 534 LLDVSNAVNELLS 546 >gi|206895681|ref|YP_002247407.1| DNA mismatch repair protein [Coprothermobacter proteolyticus DSM 5265] gi|206738298|gb|ACI17376.1| DNA mismatch repair protein [Coprothermobacter proteolyticus DSM 5265] Length = 542 Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats. Identities = 162/596 (27%), Positives = 275/596 (46%), Gaps = 59/596 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L ++ ++IAAGE+IERP +KEL+EN+LDA ++ + + GG ++DNG G Sbjct: 2 IRELPLEVRSKIAAGEVIERPVSVVKELVENALDAGATDIRVSVINGGLDEIMVSDNGCG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M EE+P+AV+R TSKI +D +I T GFRGEAL SI V+ LT+ S T Q Sbjct: 62 MPFEELPLAVKRFTTSKIGSVEDLDSIATLGFRGEALASIADVADLTIFSC--DGETSGQ 119 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I G ++ +PVA GT V VRDLFF +PAR FL+S E + I ++ M + YP Sbjct: 120 LRIRGGELLLCKPVASPKGTRVIVRDLFFNLPARKKFLRSASTEFSHIQKFLQSMVLIYP 179 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V +TF++ K + + + ER + G+ A ++ +I Sbjct: 180 NVQWTFTSEKGVIWHV---PPQLSAEERFYSLFGQKAQFRAFTASQGELDI--------- 227 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 N + + +NGR ++ +R + PV+VL L ++P QVDVNVH Sbjct: 228 YLNPNIVGELILSVNGRLIKGSAYFQVLR-ILKDMWGGANLPVMVLRLNVEPDQVDVNVH 286 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K IRF++ +R + + I + D +P Y + Sbjct: 287 PQKLDIRFKSQVWLRQALQELI-------------TQVRGEAGGLGIDFKTNGGMPHYQS 333 Query: 361 SL--TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 T + + + N +L + ++ + S+ + ++ YI Sbjct: 334 EAWTTTPNDAPTVVSETMRENYMLFQKEVLQNQKDVGSAVSKGFEIKD-----YLYDTYI 388 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + + + DQHA +E++ + ++ + L L C++ E + Sbjct: 389 LIKRDGVYELWDQHAVNEKINYWRL------------SSLYGVQFLLEPLFCSVDEETAQ 436 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L +G + ++ I+ +P++L ++ D ++ I + IE A Sbjct: 437 ALTEMGFELQQVRGG-YLIKAVPSLLLLSRSLDVIIDDLESIKGN---------IEKTRA 486 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC ++++G+K+ +E+ L+ E K + S HGRP +KL + IE+LF R Sbjct: 487 DLACKSAVKAGQKLSPMEIEALVVEGLKVLDVSYDPHGRPAVVKLDEALIERLFNR 542 >gi|239993397|ref|ZP_04713921.1| DNA mismatch repair protein [Alteromonas macleodii ATCC 27126] Length = 619 Score = 360 bits (925), Expect = 3e-97, Method: Composition-based stats. Identities = 136/421 (32%), Positives = 219/421 (52%), Gaps = 6/421 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA ++++E I GG +I DNG Sbjct: 1 MPIQLLSPQLANQIAAGEVVERPASVVKELLENSLDAGATKIEVDIEKGGHKRIRIKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIVKSELQLALSRHATSKITTLDDLEQILSLGFRGEALASISSVSRLTLTSRTESQGEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +++P A GT ++V DLF+ PAR FL++E+ E I +VI+R+A+ Sbjct: 121 WQAYCEGREMAVNIQPAAHPVGTTIDVADLFYNTPARRKFLRTEKTEFQHIEEVIKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +YPKVSF + G+ RI V+G+ F+ NAV ++ + + + + Sbjct: 181 SYPKVSFVLKHNDKVAKRFIADKA-GSLATRIGAVVGQKFVQNAVHISTEYEGLHIDAWL 239 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G R + + + F+NGR ++DK I+ IR AY + P V+ L ++P+ VDV Sbjct: 240 GNEAMLRSSNDCQFSFVNGRGMRDKLIMHAIRQAYESVWGVVEQPSFVVYLTVNPKDVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF+ ++ +FI +++ A++ S + + Sbjct: 300 NVHPAKHEVRFQQGRLVHDFICKTVSDALHAMTDEQPLSGMDASRPSGSDFMSSQVEHDY 359 Query: 358 YAT--SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 + T+ + F + +R ST + +Y + + + G + H+ Sbjct: 360 IRPLQNQTSDNAQAFNESSRYSTGGISQGAPQSYGQFTGSPRNTSSGSASGGRSGGAAHK 419 Query: 416 N 416 Sbjct: 420 Q 420 >gi|148358566|ref|YP_001249773.1| DNA mismatch repair protein MutL [Legionella pneumophila str. Corby] gi|296108344|ref|YP_003620045.1| DNA mismatch repair protein MutL [Legionella pneumophila 2300/99 Alcoy] gi|148280339|gb|ABQ54427.1| DNA mismatch repair protein MutL [Legionella pneumophila str. Corby] gi|295650246|gb|ADG26093.1| DNA mismatch repair protein MutL [Legionella pneumophila 2300/99 Alcoy] Length = 576 Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats. Identities = 136/520 (26%), Positives = 253/520 (48%), Gaps = 13/520 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +LS I NQIAAGE+IERP+ +KEL+ENSLDA +S + + GG ++DNG Sbjct: 4 RIHQLSPAIANQIAAGEVIERPASVVKELLENSLDAGASVIGVDVNYGGLLQITVSDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+AV H TSKI DD +I + GFRGEAL SI +V+ +T++S+P + + Sbjct: 64 GIVGDDLPLAVAAHATSKIRTLDDLYSIDSMGFRGEALASIASVAKVTIISKPEEQDNAM 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + ++ P A N GT ++V DLF+ P R FLK+E++E I V++R A++ Sbjct: 124 MLRVEG-ENRTLSPCARNIGTTIDVSDLFYNAPVRKRFLKNEKLEFQAIEMVVKRFALSA 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++ T K + + + R+ +++G F+ A+ L+ + + + L G+ Sbjct: 183 PRIALTLKHNKKLIFSLPPALSEQAKAIRMGRILGNTFMREAIFLDVEHSGMRLYGWISN 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + R ++ ++++N R V+DK + ++ AY + GR+P+ +L + +VDVNV Sbjct: 243 QSLQRSQNDRQWIYVNQRMVKDKLLQHAVKQAYDGLLHAGRFPICLLYFSLPASEVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY- 358 HP K +RF+ P ++ +F + KA+ + SS ++ + Sbjct: 303 HPTKHEVRFQQPRLVHDFFTSQLTKALQSTLDHSDMREYAYAASSCNEQKNTVSEPSHIC 362 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 ++ EK ++ + + E+E+ +++ +I Sbjct: 363 NDRESHEGEKALFPSWSGNSLSSSITSKRYKKNSSVYHPETES-------QWVILNERFI 415 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + + D A + I +++ Q + S+ LL L + Sbjct: 416 LVFIKQQPYLADIVALFQEWIEKQLMQKAL--PLESRPLLISIRYSLPNQWIHKPEQLKH 473 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 +L R+GI+ E + + IR IP ++ + + + Sbjct: 474 ELARVGIQIEYSNADDLLIRSIPLNAPYLDVRRFFNILCE 513 >gi|167461065|ref|ZP_02326154.1| DNA mismatch repair protein [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381943|ref|ZP_08055893.1| DNA mismatch repair-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154083|gb|EFX46411.1| DNA mismatch repair-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 682 Score = 360 bits (924), Expect = 4e-97, Method: Composition-based stats. Identities = 133/401 (33%), Positives = 210/401 (52%), Gaps = 5/401 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E+I NQIAAGE++ERP+ +KEL+ENS+DA S+RV+ I GG ++ DNG Sbjct: 3 RIQLLDEQISNQIAAGEVVERPASVVKELVENSIDASSTRVDVSIEEGGLQSIRVRDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+ +A RH TSKI+ D +I T GFRGEALPSI AVS +T + N G Sbjct: 63 GIEAEDCELAFFRHATSKIARGKDLFSIRTLGFRGEALPSIAAVSKVTCTTATDNNGLGR 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI I G I SV+ A + GT + ++DLF+ PARL ++K+ Q E I+D + R+A+A+ Sbjct: 123 QIVIEGGNICSVQETAASKGTDIIIKDLFYNTPARLKYMKTIQTELGHISDYMYRLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P SFT + + NG+ + I+ + G + + L +S + T++GY Sbjct: 183 PDRSFTLRHNGN---TLLQTLGNGDLLQVIAAIYGTNLAKKMISLKGESLDYTVRGYISK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N + +F+NGR V+ + I + Y +P+ R+P+VVL + +DP VDVNV Sbjct: 240 PELTRANRSGISIFVNGRYVRSFPLNHAILSGYHTLLPINRFPLVVLEVGMDPGLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +RF + ++ + I++ + + + + K+ Q+ + Sbjct: 300 HPAKLEVRFSKEQDLTRWLEELIKETLGMQVLIPKADKPAKIREQVVQEELHLARAKEET 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 Q K + S + + + E Sbjct: 360 APAFQGQTKFKEDKPSQSAPVDKEIFSTSVRYQAEDMHEKS 400 Score = 197 bits (502), Expect = 3e-48, Method: Composition-based stats. Identities = 51/191 (26%), Positives = 89/191 (46%) Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 + Q+H Y+++Q +GL ++DQHAAHER+ +E F + SQ LL P + Sbjct: 490 FPELTPVGQVHGTYLVAQNEEGLFLIDQHAAHERINYEYYYHKFGQPEEASQELLMPISL 549 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 + E A + + L ++G+ E FG N +R P + +++ ++ + I+ Sbjct: 550 EFTPSEAAALKDRLHLLEQVGVHIEPFGGNTFLVRAYPHWFPSGDEKEIIDEMCEWILSE 609 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 L E +C SI++ + + +EM LL + N C HGRP + Sbjct: 610 KQGVDLAKLREKSSTLCSCKASIKANQNLSRLEMEVLLDRLSGCKNPYTCPHGRPIVVSF 669 Query: 584 KLSDIEKLFGR 594 ++EK+F R Sbjct: 670 STYELEKMFKR 680 >gi|114773231|ref|ZP_01450466.1| DNA mismatch repair protein [alpha proteobacterium HTCC2255] gi|114546350|gb|EAU49259.1| DNA mismatch repair protein [alpha proteobacterium HTCC2255] Length = 600 Score = 360 bits (923), Expect = 5e-97, Method: Composition-based stats. Identities = 150/540 (27%), Positives = 249/540 (46%), Gaps = 24/540 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENS+DA +++++ +I GG I DNG Sbjct: 1 MSIQILSAQLANQIAAGEVVERPASIVKELVENSIDAGATKIDILIEQGGHKRITIVDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI DD +NI + GFRGEAL SI +VS LTL S+P + Sbjct: 61 CGIVKDELALALSRHATSKIHTIDDLTNIASLGFRGEALASISSVSRLTLTSKPASQSEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ G + + P A G+ V+V DLF+ PAR FLK+ + E I ++++R+A+ Sbjct: 121 WQVHCEGRDMDVIINPAAHPDGSTVDVVDLFYNTPARRKFLKTHKTEFTHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A P V + N +RI V G+ F+ + V + + ++ + Sbjct: 181 AAPHVGIKLTHNGKVIRHTPA----QNIEKRIDAVCGKGFVTDCVCVEREYQGTKVRAWL 236 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P +R + Y F+NGR ++DK I I+ AY I +P V+ +E+ +VDV Sbjct: 237 TKPMVHRNQNDVQYTFVNGRMMRDKLINHAIKQAYEGLIDSQFFPGYVVFIEVPLGEVDV 296 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI--------NKKGISTSSVLSKKMISSFHQDN 349 NVHPAK +RF N I+ +F+ QS+ +A+ + I Q Sbjct: 297 NVHPAKHEVRFVNSRIVHDFLYQSMSEALHNGFSDNTASTQDYAELTVEHDYIVPLEQQQ 356 Query: 350 APKTHLPKYATSLTNTQEK---LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 + + + ++ + L +E + ++ T V E L Sbjct: 357 NTYSSGAQSNSGVSYPRANASGLSAREQATAASNYGTMHTGTMGRVGGNVAEQVKREQSL 416 Query: 407 GIACAQIHQNYIISQTTDGLVIV-DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 + Q+ + D L+ + + D T Q LL P +++ Sbjct: 417 ALPAGQMLILSTPLEGCDLLIQAKQLQVCSSIPVIARYLHDQMIQAETQQPLLLPVSVNV 476 Query: 466 LEGECALIMEHDEDLHRLGIKAE--RFGPNA--IAIREIPAILSKKNIPQLLRDIIDEII 521 AL+ + R + E + G +A ++++P+ L +L I+ I Sbjct: 477 T-LPEALLTSLEASFERAQWEIECIQAGQHAQKWILKKVPSTLRSLPWSRLFGQILANIK 535 >gi|90581379|ref|ZP_01237175.1| DNA mismatch repair protein [Vibrio angustum S14] gi|90437489|gb|EAS62684.1| DNA mismatch repair protein [Vibrio angustum S14] Length = 723 Score = 360 bits (923), Expect = 5e-97, Method: Composition-based stats. Identities = 131/409 (32%), Positives = 202/409 (49%), Gaps = 3/409 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIEKGGSRLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 KGIPKDELALALSRHATSKITTLDDLEAIVSLGFRGEALASISSVSRLTLTSRTQAQEEA 120 Query: 119 AQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +P A GT +EV DLFF PAR FL++E+ E N I ++I+R+A+ Sbjct: 121 WSAYAEGRDMDVQLKPAAHPVGTTLEVLDLFFNTPARRKFLRTEKTEFNHIDELIKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ T + T R++ G F+ +A+ + ++ L G+ Sbjct: 181 SRFDVAITLRHNGKIIRQYRTAQTPIQKERRLATACGSGFLQHALVVELAHGDLKLSGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 R + Y ++NGR ++DK I IR AY ++ +Y VL +++DP QVDV Sbjct: 241 CSSQGARAQNDIQYCYVNGRMMKDKLINHAIRQAYESSLRSDQYAAYVLYIDVDPHQVDV 300 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q++Q A+ + + + I + Sbjct: 301 NVHPAKHEVRFHQARLVHDFIYQALQSALQQGALEEEQHQYQSPIRASAHSIEVDEDGVV 360 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 + + TQ + PS + SE + Sbjct: 361 IEPTNSVTQRVAQAIDATPEYPHKSPSSEWKKSESTPSHSARAPIDSDM 409 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 90/252 (35%), Gaps = 9/252 (3%) Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT--SLTNTQEKLFLQENRLS 377 Q + + +S S S + + Y + E + ++ Sbjct: 451 CERQGSDQTINTTRTSDASSGASRSPKPEGPTAAEIKAYQKLLQTESPTEHVLAEQPIER 510 Query: 378 TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 + S LG A + + Y++ Q + +++ A E Sbjct: 511 IAEPRREWQAMPSTAVVKQHAIAGKAMGLGKALCLVAERYLLMQQETDIALLNLDHA-EL 569 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 L + + + + Q LL P + + A +H L +LG++ + G N I I Sbjct: 570 LRYVGQLRLAQTEGLKPQPLLIPLSVPVESDLIACAEQHAMLLKQLGVQLKAKGRNGIII 629 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA--CYGSIRSGRKMQSI 555 + L ++N+ QL+ +++ ++ + Q + +L +A C G++ Sbjct: 630 MSVCMPLRQQNLQQLIPNLLTYLLSACDDPEAQGW-DKLLYWLAEQCVGTV---TSYSLS 685 Query: 556 EMNRLLREMEKN 567 + +L+ E+E+ Sbjct: 686 QAIQLVSELEQL 697 >gi|297623074|ref|YP_003704508.1| DNA mismatch repair protein MutL [Truepera radiovictrix DSM 17093] gi|297164254|gb|ADI13965.1| DNA mismatch repair protein MutL [Truepera radiovictrix DSM 17093] Length = 558 Score = 359 bits (922), Expect = 6e-97, Method: Composition-based stats. Identities = 159/599 (26%), Positives = 265/599 (44%), Gaps = 72/599 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR+L +++ +IAAGE++ P+ +KEL+EN+LDA ++R+E + GGG + DNG Sbjct: 3 PIRRLPPEVVREIAAGEVVTAPADVLKELLENALDAGATRLEVALDGGGTERVAVRDNGA 62 Query: 62 GMTSEEIPMAVQRHCTSKIS-DD----FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+ + E+P AV+ H TSK+S +D + T GFRGE L +I + L L SRP Sbjct: 63 GIPAAELPRAVEAHSTSKLSGEDAGAALRALCTLGFRGEGLYAIRHAARLCLTSRPAAQL 122 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 GA + G++++ GT+ V DLF +PAR L S E+ ++ R Sbjct: 123 GGASLEAFGDEVALRTH-PAPQGTLAVVTDLFARLPARRAALGSASAESRRALALLSRYL 181 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P + + R++ G F E + + G N + + + L G Sbjct: 182 LHHPHLHVSLEQDGETRWRY----AGGGFREAVKFLWGAVTANRLLGVAAEGEGYALAGL 237 Query: 237 TGIPTFNRGNANQFYVFINGRTV-QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 P +R ++ + +NGR V D+ +L + AY E + G +PV VL L + P QV Sbjct: 238 LSRPELSRPRRDRLLLAVNGRPVEWDEELLKAVTHAYRELLRAGHFPVGVLNLTVPPEQV 297 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 VN P KS +RF P + F+ ++++ + ++ S + + F AP+ Sbjct: 298 LVNTAPDKSRVRFLAPEALAAFLREAVRATLGANPLAPSLPELQAPPALF---AAPRHRF 354 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 P + Sbjct: 355 PA-------------------------------------------------LRYLGVYRE 365 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 Y++++ L +VDQHAAHER++FE++ + + L PE++ L E A Sbjct: 366 LYLLAEGEGQLWVVDQHAAHERVLFEELERRYRQEPP--VELPAPELLPLSPEEEATYAA 423 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 E L G++ E FG +R +PA L P+LL ++ + + Sbjct: 424 RREALRAAGLELEPFGGGRYRVRRVPAFLLGH--PELLPGVVSGALGRRGAD---EAWRA 478 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LA +AC +I++GR ++ LL + + C HGRPT + L ++ + FGR Sbjct: 479 VLARLACLPAIKAGRTLKDP--QALLDALARCETPWACPHGRPTALVLSELELARRFGR 535 >gi|21227784|ref|NP_633706.1| DNA mismatch repair protein [Methanosarcina mazei Go1] gi|20906190|gb|AAM31378.1| DNA mismatch repair protein [Methanosarcina mazei Go1] Length = 689 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 127/371 (34%), Positives = 213/371 (57%), Gaps = 7/371 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + IN+IAAGE+IERP+ +KEL++NS+DA ++ + + GGK I DNG Sbjct: 5 KIRILDKDTINKIAAGEVIERPASVVKELVDNSIDAGATEIRIEVEKGGKRSILIRDNGC 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ + +A ++H TSK++ +D I T GFRGEAL SI A++ + +++RPP+ G Sbjct: 65 GMSRADALLAYKKHATSKLTKIEDLDKISTMGFRGEALASITAIAKVEILTRPPEEIAGT 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G K+ + PGT V V+DLF+ PAR +LK+++ E ITD + R+A+A Sbjct: 125 KVVIHGGKVEEISDAGTAPGTSVHVKDLFYNTPARRKYLKTDRTELAHITDTVMRLALAN 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SFT + + + + + ++G D + + L+ + E ++GY Sbjct: 185 PGISFTLLNEGKPVLR---NTGSSDLFNSMVNLLGPDTARSMLPLDYGTEEFDIRGYVSK 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P NRG+++Q ++F+N R V I +R Y +P GRYPV VL L +DP +VDVNV Sbjct: 242 PELNRGDSDQLFLFVNTRPVTSSTINKAVREGYYTKMPKGRYPVAVLALTLDPGEVDVNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV--LSKKMISSFHQDNAPKTHLPK 357 HP K+ +RF + + +I +++K +++ G++ +K++ +F +PK +P Sbjct: 302 HPRKAEVRFSREKEVGDAVISAVEKVLSEHGLAPEIRGKEAKRLQKTFDAPESPKIQIPD 361 Query: 358 YATSLTNTQEK 368 + + + Sbjct: 362 TSKVVPERENA 372 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 3/235 (1%) Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 S + K ++ + + S+ P +++ + Q+ + YI+ Sbjct: 456 PSEIQPESKKAEEKIEEKIEEKIEEKIEEKSQTRKPKQKANTDLLEDLRVIGQVSRMYIL 515 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ + LVI+DQHAAHER+++E++ + S K Q L+TP +I+L E L+ E+ Sbjct: 516 AEKGEDLVIIDQHAAHERILYEQVLR---SKKSRVQELITPVMIELTPKEKVLMEEYIPY 572 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L G FG N + +P + + ++ D+I +++ E + T Sbjct: 573 LEEYGFGISEFGDNTYVVTFVPEVFGRLENTDVIHDVIADLLAEGKVKKETGISEKVSKT 632 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC +I+ G +M L+ +++ C HGRPT I + S ++++F R Sbjct: 633 FACRAAIKGGAACTPEQMEDLIEQLKTAEAPYSCPHGRPTVITITKSQLDRMFAR 687 >gi|119776159|ref|YP_928899.1| DNA mismatch repair protein [Shewanella amazonensis SB2B] gi|189030410|sp|A1SA23|MUTL_SHEAM RecName: Full=DNA mismatch repair protein mutL gi|119768659|gb|ABM01230.1| DNA mismatch repair protein MutL [Shewanella amazonensis SB2B] Length = 650 Score = 358 bits (918), Expect = 2e-96, Method: Composition-based stats. Identities = 134/400 (33%), Positives = 208/400 (52%), Gaps = 5/400 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ IKEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MAIQVLPPQLANQIAAGEVVERPASVIKELVENSLDAGATRVDIDIDKGGSKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ +A+ RH TSK+ +D I +FGFRGEAL SI +VS LTL SR + Sbjct: 61 GGIPKAELALALARHATSKVQTLEDLEAILSFGFRGEALASISSVSRLTLTSRTTEQAEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ V P A GT +EV DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAYAEGSEVAIRVMPAAHPVGTTIEVADLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 V F+ S + +T+ + +R++QV G F ++A++++ + + + L GY Sbjct: 181 IRSDVHFSLSHNGKPVRQYRCAATDTQYLQRLAQVAGRAFADSAIKVDCQHDGMGLSGYL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++NGR ++D+ + +R A+ E + P VL L +DP QVDV Sbjct: 241 QSPALSDMV-DCHYFYVNGRLIRDRLVNHAVRQAFGE-LGTFEQPAFVLSLTLDPHQVDV 298 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF + +FI+Q +Q A+++ + + S Sbjct: 299 NVHPAKHEVRFHQARYVHDFILQVLQSALSQMQDLPLAEELPRAQESPASVREHTAGYAP 358 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 Y + E + + T + S V+ Sbjct: 359 YTFNRDAATEAAGVLSSLPDTQRSQRQPEKAASGQRSSVD 398 >gi|323486938|ref|ZP_08092253.1| DNA mismatch repair protein mutL [Clostridium symbiosum WAL-14163] gi|323399710|gb|EGA92093.1| DNA mismatch repair protein mutL [Clostridium symbiosum WAL-14163] Length = 684 Score = 358 bits (918), Expect = 2e-96, Method: Composition-based stats. Identities = 118/348 (33%), Positives = 191/348 (54%), Gaps = 5/348 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + INQIAAGE+IERP+ +KEL+EN++DA+S+ V I GG S ++TDNG G Sbjct: 4 IQVLDQNTINQIAAGEVIERPASVVKELLENAVDAKSTAVTVEIRDGGLSMIRVTDNGCG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + EEIP+A RH TSKI +D + + GFRGEAL SI +V+ + L+++ + +G++ Sbjct: 64 IPKEEIPLAFLRHATSKIRTVEDLFTVASLGFRGEALSSIASVAQVELITKTTGSMSGSR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + ++ V GT R+LF+ PAR FLK+ E + D++ ++A+++P Sbjct: 124 YQIEGGEEIALEEVGAPEGTTFIARNLFYNTPARRKFLKTPMTEGAHVADLVEKIALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++S ++ S N N + I + G + N + + + + ++G+ G P Sbjct: 184 EISIRLIQNGQSKLH---TSGNHNLKDIIYTIFGREIAANLIAVQSGAEPVKVEGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 RGN N FINGR ++ I I AY + +YP +L I+P +DVNVH Sbjct: 241 LIARGNRNYENYFINGRYIKSSLINKAIEDAYKPFMMQHKYPFTMLQFTIEPEFLDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 PAK +RFR+ ++ + +I A+++K + L S + Sbjct: 301 PAKMELRFRDGEMVYRMVYHTISMALSQKELIPQVELPGGGQESANAQ 348 Score = 202 bits (513), Expect = 2e-49, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 1/262 (0%) Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 + + + AP+ P +N ++LP +P D Sbjct: 422 ADAAEQPETLRMPGTPKAPEAPGPLEFPEQYRPVPAEGKTQNPAGAKEILPKQEPPKQLD 481 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + + Q+ Y + Q D L I+DQHAAHE++++EK + Sbjct: 482 LFEEKLLTKQARNEHVLIGQLFDTYWLVQFHDNLYIIDQHAAHEKVLYEKTMASLKKREY 541 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 TSQ + P I+ L E ++ ++ E +G + E FG A+R +PA L +L Sbjct: 542 TSQMINPPIILTLSGNEELMLKKYMEHFTAVGFEIEHFGGKEYAVRAVPANLFSIAKKEL 601 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 L ++ID + D D I +A+M+C +++ M + E + L+ E+ + N Sbjct: 602 LMEMIDGLTD-GVDQGTPDIINEKIASMSCKAAVKGNHAMSAAEADSLIDELLELENPYA 660 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT I + ++EK F R Sbjct: 661 CPHGRPTIITMSKYELEKKFKR 682 >gi|153853166|ref|ZP_01994575.1| hypothetical protein DORLON_00560 [Dorea longicatena DSM 13814] gi|149753952|gb|EDM63883.1| hypothetical protein DORLON_00560 [Dorea longicatena DSM 13814] Length = 701 Score = 358 bits (918), Expect = 2e-96, Method: Composition-based stats. Identities = 125/368 (33%), Positives = 195/368 (52%), Gaps = 6/368 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L I++IAAGE+IERP+ +KEL+EN++DA ++ + I GG SF +ITDNG Sbjct: 3 KIQVLDPITIDKIAAGEVIERPASVVKELVENAIDAGATAIVVEIKEGGISFMRITDNGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ A RH TSKI DD +I + GFRGEAL SI AV+ + L+++ G Sbjct: 63 GIERDDVRSAFLRHSTSKIRSVDDLVHIGSLGFRGEALSSISAVAQVELITKTRDQTFGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I+G K + GT +R LF+ PAR FLK+ E + + D++ R+A+++ Sbjct: 123 LYRIAGGKEEDLEDTGAPDGTTFIIRQLFYNTPARRKFLKTPMTEASHVGDLMTRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF F ++ S NG + I + G D N ++ + + + G+ G Sbjct: 183 PHISFQFINNGQSKLH---TSGNGKLKDVIYHIYGRDIAANLLKAEYDAKGLKVTGFLGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +RGN N ++NGR ++ I I AY + +YP VVL +EID VDVNV Sbjct: 240 PIISRGNRNFENYYVNGRYAKNNIISRAIEDAYKDFTMQHKYPFVVLHIEIDGEHVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-KMISSFHQDNAPKTHLPKY 358 HP K +RF N + N I ++ + +++K + + + K + S APK Sbjct: 300 HPTKMELRFNNQQEVYNAIYSAVDQGLHEKELIPHVEMPEPKPVVSNTPAYAPKPKTGSV 359 Query: 359 ATSLTNTQ 366 + + Q Sbjct: 360 SQTPAAVQ 367 Score = 204 bits (518), Expect = 5e-50, Method: Composition-based stats. Identities = 69/317 (21%), Positives = 138/317 (43%), Gaps = 13/317 (4%) Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 P++ V P + + ++ ++ ++ ++ I+T + + + Sbjct: 383 MPQRKKAIVPPPQERDLEYFMSRMKERVLAEHEEKKRREKIATKQAVHTTENIAENISVK 442 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY------ 404 +T +EK+ +N S + + S + + +P Sbjct: 443 ESPSFSSASTPSNVAEEKIPYMQNASSKSKITMSTNTDETTKPEPSLTETPKQMELFEDH 502 Query: 405 -------QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 Q Q+ + Y + + + L I+DQHAAHER+++EK + + + TSQ + Sbjct: 503 LLTREAMQKYKVVGQVFETYWLVEYDNSLYIIDQHAAHERVLYEKTLKSMKTREFTSQMI 562 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 P +++L E L+ + + R+G + E FG ++ A+R +P L +LL ++ Sbjct: 563 SPPIVLNLSMQEAELLNTYMDQFTRIGFEIEEFGQDSYAVRAVPDNLFSIAKKELLIQML 622 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D + D T D I+ +A+M+C +++ K+ E++ L+ E+ N C HGR Sbjct: 623 DSLSDEITRNQSPDLIDEKIASMSCKAAVKGNMKLSVQEVDALIGELLSLDNPYHCPHGR 682 Query: 578 PTFIKLKLSDIEKLFGR 594 PT I + ++EK F R Sbjct: 683 PTIIAMTKRELEKKFKR 699 >gi|198276166|ref|ZP_03208697.1| hypothetical protein BACPLE_02355 [Bacteroides plebeius DSM 17135] gi|198270978|gb|EDY95248.1| hypothetical protein BACPLE_02355 [Bacteroides plebeius DSM 17135] Length = 685 Score = 358 bits (918), Expect = 2e-96, Method: Composition-based stats. Identities = 122/479 (25%), Positives = 211/479 (44%), Gaps = 6/479 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + NQIAAGE+I+RP+ IKEL+EN++DA + +E ++ GK+ ++ D+G G Sbjct: 7 IRLLPDSVANQIAAGEVIQRPASVIKELVENAVDAGAKNIEVLVTDAGKTCIRVIDDGRG 66 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + MA +RH TSKI + D +HT GFRGEAL SI AV+ + L + ++ G Sbjct: 67 MSETDARMAFERHATSKIREAADLFALHTMGFRGEALASIAAVAQVELKTCSSEDGLGTF 126 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ISG ++ VA G+ V++LFF +PAR FLKS Q E + I R+A+ P Sbjct: 127 IQISGSQVEKQEAVACQRGSDFSVKNLFFNVPARRKFLKSNQTELSNIVAEFERIALVNP 186 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF S + + +RI V G+ + L+ + + + GY G P Sbjct: 187 DISFVLSHNGTEMLNLPALP----LRQRIMGVFGKKLNQELLSLDIDTTMVKIHGYIGRP 242 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + F+NGR ++ + + +AY IP+G + E++P +DVN+H Sbjct: 243 ESARKKGARQFFFVNGRYMRHPYFHKAVSSAYDNLIPVGEQVSYFIYFEVEPSDIDVNIH 302 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ I+F N + + ++++ + + S + + + T Sbjct: 303 PTKTEIKFENEQAVWQILSAAVKETLGRFNAVPSIDFDTEGMPDIPAFENSPYTVAPPQT 362 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 S + S + + ++ + E + +++ + Sbjct: 363 SFDPSYNPFNTTAVPPSAYSSASATNKETERESFGQDVREWGASTGTSVRSSMNKGGMPD 422 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 G + R+ +E + + T S E+ ED Sbjct: 423 FGRSGNYTPSFGSHKNRVEWEPLFEGLERTSSDSDIQPEEEVRPFFPESTEWGQASQED 481 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 103/253 (40%), Gaps = 11/253 (4%) Query: 346 HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 + P + +S ++ Q + ++ + + + + EE E + Sbjct: 439 RVEWEPLFEGLERTSSDSDIQPEEEVRPFFPESTEWGQASQEDAVTPSFSGEEGEKQSQE 498 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 + Q +YI++ GL+I++Q AH R++F++ + K SQ +L P+++ Sbjct: 499 NSMHHYQYKGSYILTSVKSGLMIINQQRAHIRILFDRYMAQIENRKNASQRMLFPDMVHF 558 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS- 524 E ++ E +DL+ LG G +I IPA + N +L+ ++I I+ Sbjct: 559 SPSEIPVLEEFMDDLNALGFDLSSLGGGTYSINGIPAGIEGLNPEKLVTEMIQTAIEKGC 618 Query: 525 ----TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 ++ A I G+ + EMNRL+ ++ + G+ Sbjct: 619 KVKEEVQSMLALSLAKAAA------IVPGQVLTDEEMNRLVDDLFAVSTPNYTPDGKTVL 672 Query: 581 IKLKLSDIEKLFG 593 LK D+EK+F Sbjct: 673 TVLKEDDLEKMFK 685 >gi|209525445|ref|ZP_03273985.1| DNA mismatch repair protein MutL [Arthrospira maxima CS-328] gi|209494125|gb|EDZ94440.1| DNA mismatch repair protein MutL [Arthrospira maxima CS-328] Length = 578 Score = 358 bits (918), Expect = 2e-96, Method: Composition-based stats. Identities = 156/610 (25%), Positives = 271/610 (44%), Gaps = 72/610 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ LSE++++ IAAGE+I+ + ++EL+EN++DA+++R+ + + ++ DNG Sbjct: 14 SIKILSEEVVDLIAAGEVIDSVAAVVRELVENAIDAKATRISVSLW-PQQWRIEVADNGE 72 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT-- 117 GM + +A H TSKI+ D I + GFRGEAL SI +S L ++SRP +++ Sbjct: 73 GMNLANLKLAALAHSTSKIATARDLLKISSLGFRGEALHSIAQLSDLEILSRPGFSSSPS 132 Query: 118 --GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 + + V VA+ PGT+V V +LF +R + + +++++ Sbjct: 133 SGWRVVYNHQGETEMVEAVAIAPGTVVRVSNLFANWSSRRTAGPTATQQLRGAQLLLQQI 192 Query: 176 AIAYPKVSFTFSTIKSNRYKM-NFQSTNGNFPERISQVIGEDFIN---------NAVELN 225 A+ +P+V++ + +T PE I + D + E + Sbjct: 193 ALCHPQVTWQIHQNDRPWLRFGPAMTTQQMLPEFIRGIRAGDLQYLKMDVDPPESVEECH 252 Query: 226 EKSNEITLQGYTGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 E ++ L+ G+P +RG + + +NGR V+ + TI +A+A T RYP+ Sbjct: 253 ENLSKSWLEVVIGLPDRASRGRKDWVKIGVNGRMVRSPELEPTILSAFARTCGRDRYPIC 312 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 + L IDP +D N HP+K+ I ++ I +I + + Sbjct: 313 FVHLHIDPALIDWNRHPSKAEIYLHYLKHWQDQIHLAIDQTLKLN--------------- 357 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 P+ ++ N EKL ++ T + E + Sbjct: 358 -----------PESLSAGVNPIEKLLRVSEDTASY-------RTRPTPLESAENPQRIDV 399 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 A QIH YI+++ +GL +V+QH AHER+I+E++ + + +++ +L Sbjct: 400 PKLKAIGQIHNTYIVAEHPEGLWLVEQHIAHERVIYEQLCRRWQVIPLSTPIILAN---- 455 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L E L RL ++ + FG AIR P IL + D + +I+ S Sbjct: 456 -------LSEAQLEQLTRLNLEVDPFGEGLWAIRSAPEILCDR------PDCQEALIELS 502 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 LQ AC +IR+G + EM LL + + C HGRP F+ L+ Sbjct: 503 HGGDLQ----AAQVATACRSAIRNGTPLSLTEMQTLLDQWVTTRSPRTCPHGRPIFLSLE 558 Query: 585 LSDIEKLFGR 594 S + + F R Sbjct: 559 ESSLARFFRR 568 >gi|307192776|gb|EFN75866.1| Mismatch repair endonuclease PMS2 [Harpegnathos saltator] Length = 672 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 143/656 (21%), Positives = 270/656 (41%), Gaps = 78/656 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI ++++ I+ I +G+++ +IA+KEL+ENSLD+ ++ ++ + GK+ I DNG Sbjct: 13 KIEAINKETIHHICSGQVVLDLAIAVKELVENSLDSGATVIDIKLIDYGKTCISINDNGS 72 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ +H TSK+ + D ++TFGFRGEAL S+ A+S L+++++ + G Sbjct: 73 GVLEQDFEGLGLKHHTSKLREFTDLIEVNTFGFRGEALSSLCALSELSIITKHSLSEHGF 132 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 ++ I P A GT V VR++F +P R F K+ + E V+ + Sbjct: 133 KLEFDRNGILKKKEPFAREKGTTVHVRNIFKNLPVRAKEFQKNLKKEYARTIQVLYGYCL 192 Query: 178 AYPKVSFTF--STIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK-------- 227 V T + + + ++ + I+ V G+ ++ V+L + Sbjct: 193 VSTNVKITCFNTISSKSPNLIVATRSSNYVLDNINSVFGKKALDGIVKLELQAPDEMTLQ 252 Query: 228 --------SNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIP 277 + + Y + G + ++ + ++NGR I + Y + Sbjct: 253 EYNLSDNVPMDFDWECYVSVCDHAIGRSSPDRQFFYVNGRPCDLMKISKLVNNVYHKY-N 311 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL 337 +YP V L +++D + DVNV P K I F I + S+ +K + ++ Sbjct: 312 NKQYPFVFLNIKLDRQSADVNVTPDKRTIFFTQERFILATLKYSLIAKWDKMQGNFTAKT 371 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNT-------------------------------- 365 + S + +P P T++ Sbjct: 372 LTDLNFSLKRAISPNNAHPPAKRLQTSSSISHMSRNNDIWNDIKLRKKSVNVEMMINITM 431 Query: 366 -QEKLFLQEN--RLSTNDLLPSDDPTYSEDNDPVEESE------ATHYQLGIACAQIHQN 416 ++KL ++N + S N E N E E + Q + Sbjct: 432 IKQKLKAKQNVVKASINTGRRIKYRVQMEGNQGDAEKELQRELTKDSFSKMEIVGQFNLG 491 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 +II++ D L I+DQHA E+ FEK N TK+ +Q L+ P+ ++ ++++H Sbjct: 492 FIIARLEDDLFIIDQHATDEKFRFEKF---SNETKLKTQKLIIPKPLNFSALNETILIDH 548 Query: 477 DEDLHRLGIKAER----FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT---- 528 + G + I + +P + + + +++ I + + Sbjct: 549 QQTFEDNGFTFKIDKQAEPGKRIELIGMPVSGGWQFGQEDIEELVFLIREGGSENKEKHI 608 Query: 529 -LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R+ +LA+ AC ++ G + + EM RL+ +M + N C HGRPT L Sbjct: 609 FRPSRVRQMLASRACRSAVMIGTALNTNEMQRLIMQMTQMQNPWNCPHGRPTIRHL 664 >gi|332031616|gb|EGI71088.1| Mismatch repair endonuclease PMS2 [Acromyrmex echinatior] Length = 672 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 138/656 (21%), Positives = 267/656 (40%), Gaps = 78/656 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI ++ + I+ I +G+++ +IAIKEL+ENSLD+ ++ ++ + GK+ + DNG Sbjct: 13 KIEAINRETIHHICSGQVVLDLAIAIKELVENSLDSGATVIDVKLTDYGKTCISVNDNGS 72 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ +H TSK+ + D + ++TFGFRGEAL S+ A+S L++++R N G Sbjct: 73 GVLEQDFEGLGLKHHTSKLREFTDLTEVNTFGFRGEALSSLCALSELSIVTRHASNEHGF 132 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 ++ + + P A GT V V+++F +P R F K+ + E V+ + Sbjct: 133 KLEFDRNGVLTKKEPCAREKGTTVHVKNIFKNLPVRAKEFQKNLKKEYARAIQVLYSYCL 192 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN------ 229 V T S + + + + ++ V G+ ++ V+L ++ Sbjct: 193 VSTSVKITCSNLISGKSPNLIVATRNTDDVLNNVNSVFGKKSLDGIVKLELQTPDETVLQ 252 Query: 230 ----------EITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIP 277 + + Y G + ++ + ++NGR + I Y + Sbjct: 253 EYNLPNDIIVDFDWECYVSTCNHTIGRSSPDRQFFYVNGRPCDLAKVGKLINNVYHKY-N 311 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL 337 +YP V L++D + DVNV P K I +I + S+ +K + + Sbjct: 312 NKQYPFVFFNLKLDRQCADVNVTPDKRTIFVTQERLILATLKFSLTIKWDKLQGNFTVKT 371 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTN------------------ 379 ++ + + P + ++E+ + TN Sbjct: 372 LTELNFGLKRTISSSHTQPPAKRLQVSPSVSYIVKESDIQTNIKSMKKPVDTEMMISIVT 431 Query: 380 -----------------------DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 + + + + +E + Q + Sbjct: 432 IKEKLNEKVNIARTPVSTAKRIKYRVQMEANQSEAEKELQKELTKDSFGKMEIIGQFNLG 491 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 +II++ D L I+DQHA E+ FEK+ N TK+ +Q L+ P++++ +++EH Sbjct: 492 FIIARLEDDLFIIDQHATDEKFRFEKL---SNETKLKTQKLIVPKLLNFSALNETILIEH 548 Query: 477 DEDLHRLGIKA---ERFGPN-AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT---- 528 + G E+ P I + +P + + + ++I I ++ Sbjct: 549 QQMFEDNGFTFNINEQAEPGKKIELIGMPVSGHWQFDQEDIEELIFLIREAGNENMDKHI 608 Query: 529 -LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R+ +LA+ AC ++ G + EM RL+ +M + N C HGRPT L Sbjct: 609 YRPSRVRQMLASRACRSAVMIGTALNFSEMQRLITQMAQMQNPWSCPHGRPTIRHL 664 >gi|323691986|ref|ZP_08106234.1| DNA mismatch repair protein MutL [Clostridium symbiosum WAL-14673] gi|323503909|gb|EGB19723.1| DNA mismatch repair protein MutL [Clostridium symbiosum WAL-14673] Length = 684 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 118/348 (33%), Positives = 192/348 (55%), Gaps = 5/348 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + INQIAAGE+IERP+ +KEL+EN++DA+S+ V I GG S ++TDNG G Sbjct: 4 IQVLDQNTINQIAAGEVIERPASVVKELLENAVDAKSTAVTVEIRDGGLSMIRVTDNGCG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + EEIP+A RH TSKI +D + + GFRGEAL SI +V+ + L+++ + +G++ Sbjct: 64 IPKEEIPLAFLRHATSKIRTVEDLFTVASLGFRGEALSSIASVAQVELITKTTGSMSGSR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + ++ V GT R+LF+ PAR FLK+ E + D++ ++A+++P Sbjct: 124 YQIEGGEEIALEEVGAPEGTTFIARNLFYNTPARRKFLKTPMTEGAHVADLVEKIALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++S ++ S N N + I + G + N + + ++ + ++G+ G P Sbjct: 184 EISIRLIQNGQSKLH---TSGNHNLKDIIYTIFGREIAANLIAVQSGADPVKVEGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 RGN N FINGR ++ I I AY + +YP +L I+P +DVNVH Sbjct: 241 LIARGNRNYENYFINGRYIKSSLINKAIEDAYKPFMMQHKYPFTMLQFTIEPEFLDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 PAK +RFR+ ++ + +I A+++K + L S + Sbjct: 301 PAKMELRFRDGEMVYRMVYHTISMALSQKELIPQVELPGGGQESANAQ 348 Score = 201 bits (511), Expect = 3e-49, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 1/262 (0%) Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 + + + AP+ P +N ++LP +P D Sbjct: 422 ADAAEQPETLRMPGIPKAPEAPGPLEFPEHYRPVPAEGKTQNPAGAKEILPKQEPPKQLD 481 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + + Q+ Y + Q D L I+DQHAAHE++++EK + Sbjct: 482 LFEEKLLTKQARNEHVLIGQLFDTYWLVQFHDNLYIIDQHAAHEKVLYEKTMASLKKREY 541 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 TSQ + P I+ L E ++ ++ E +G + E FG A+R +PA L +L Sbjct: 542 TSQMINPPIILTLSGNEELMLKKYMEHFTAVGFEIEHFGGKEYAVRAVPANLFSIAKKEL 601 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 L ++ID + D D I +A+M+C +++ M + E + L+ E+ + N Sbjct: 602 LMEMIDGLTD-GVDQGTPDIINEKIASMSCKAAVKGNHAMSAAEADSLIDELLELENPYA 660 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT I + ++EK F R Sbjct: 661 CPHGRPTIITMSKYELEKKFKR 682 >gi|332995410|gb|AEF05465.1| DNA mismatch repair protein [Alteromonas sp. SN2] Length = 589 Score = 357 bits (916), Expect = 3e-96, Method: Composition-based stats. Identities = 151/553 (27%), Positives = 253/553 (45%), Gaps = 21/553 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA + ++E I GG ++ DNG Sbjct: 1 MSIQLLSPQLANQIAAGEVVERPASVVKELLENSLDAGADKIEIDIEKGGHKRIRLKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKIS DD I + GFRGEAL SI +VS LTL S+ N Sbjct: 61 GGIAKDELQLALSRHATSKISTLDDLERILSLGFRGEALASISSVSRLTLTSKTESQNEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ +++P A GT ++V DLF+ PAR FL++E+ E I DV++R+A+ Sbjct: 121 WQAYCEGREMAVNIQPAAHPKGTTIDVADLFYNTPARRKFLRAEKTEFQHIEDVVKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +YP SF + +G+ RI+ V+G+ FI+NAV +N + IT+ + Sbjct: 181 SYPHASFILKHNGKTTKRYIAD-KHGSLAPRIAAVVGQKFIDNAVHINVEYEGITMNAWL 239 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G R + + + F+NGR ++DK I+ IR AY + P V+ L +DP+ VDV Sbjct: 240 GSEVMLRSSNDCQFSFVNGRGMRDKLIMHAIRQAYESVWGVLEQPSFVVYLTLDPKDVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF+ ++ +FI +++ A++ T+ ++ + D K + P+ Sbjct: 300 NVHPAKHEVRFQQGRLVHDFICKTVCDALHS---ITNESETQHHGDAERFDEPVKFNPPQ 356 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 + ++ + S + A Sbjct: 357 QSHDYIRPLSHSPASSSQSGLGASGGASLSGLSGHRQSKAPTAAYQSNFNRLMTPNSDTL 416 Query: 418 IISQTTDGLVIVDQHAAHERLIFEK--------MRQDFNSTKITSQTLLTPEIIDLLEGE 469 ++ I + E + + P ++ + Sbjct: 417 SSTEHEQSQHIALNSYCRIYVRNENVYLLDVKFFADVYLQDVFETAEHSQPLLMPVALEV 476 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI----PQLLR-DIIDEIIDSS 524 + E E L+ L + + ++++PA +LL D+ D+ Sbjct: 477 AHVEPEKIEVLNALNFEINQVAGK-YRLQQVPAGTRHFPWIRWFERLLESDVADDDKRYE 535 Query: 525 TTYTLQDRIENIL 537 + ++ IL Sbjct: 536 LVLSDDQDLDEIL 548 >gi|62185520|ref|YP_220305.1| DNA mismatch repair protein [Chlamydophila abortus S26/3] gi|81312332|sp|Q5L4T7|MUTL_CHLAB RecName: Full=DNA mismatch repair protein mutL gi|62148587|emb|CAH64359.1| DNA mismatch repair protein MutL [Chlamydophila abortus S26/3] Length = 582 Score = 357 bits (916), Expect = 3e-96, Method: Composition-based stats. Identities = 141/522 (27%), Positives = 255/522 (48%), Gaps = 14/522 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L INQIAAGE+IE +KEL+EN+LDA + +E GGG+ + DNG Sbjct: 6 RIQLLDTVTINQIAAGEVIENAVSVVKELVENALDAGADEIEVETLGGGQGLIVVKDNGC 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+S+E+ +A++RH TSKI + D ++ +FGFRGEALP+I ++S + ++S P G+ Sbjct: 66 GMSSDEVTLALKRHATSKIEEFSDVFSLSSFGFRGEALPAIASISKMEILSCPKGEE-GS 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G ++ + GT + V LF+ +P R F KS Q + ++ ++ Sbjct: 125 RTIIHGGEVIAAEAKPRQLGTTISVDSLFYNVPVRRGFQKSPQTNRIAMRKLLENRILSL 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V +++ + + + + ER++ V+GE F+ A+ ++ I + G+ G Sbjct: 185 ESVGWSWISERQQEFHILKHQG---LAERVAFVMGEGFMQEALRVDRVEEPIRIVGFLGS 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F+R +FIN R V I I AY +P RYPV VL L + P+ D NV Sbjct: 242 PCFHRPTRLGQRIFINDRPVDSPLISKQISEAYTMLLPPQRYPVFVLKLYLPPQWCDFNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--FHQDNAPKTHLPK 357 HP K+ +R +R F+ +SI + + + S+S + + + F P+ L + Sbjct: 302 HPQKTEVRILKEEFVREFLSESIGEVLARSQESSSYKKTSLTLPTLRFFDGQLPEISLEQ 361 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 S++ +L R S + L + + + E+ + + +I Sbjct: 362 PRESMSLPVTQLATPSIR-SISSLGCQQEIPAVDTQTEIVWGESQEVRFLTSLGKI---- 416 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 ++++ ++G+ + AA + L + + ++ SQ+ L P +++ E ++ H Sbjct: 417 VLAEDSEGVHAIFTEAARKHLFYLSLIENQQEH-YKSQSFLVPLCLEVTPQERVFLLSHI 475 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 E+ +LGI+ + GP AI P + ++ + + + E Sbjct: 476 EEFKQLGIEISQIGPCVFAIESAPTFIGEEELKSWILSLAAE 517 >gi|283797911|ref|ZP_06347064.1| DNA mismatch repair protein MutL [Clostridium sp. M62/1] gi|291074378|gb|EFE11742.1| DNA mismatch repair protein MutL [Clostridium sp. M62/1] Length = 734 Score = 357 bits (916), Expect = 3e-96, Method: Composition-based stats. Identities = 117/334 (35%), Positives = 184/334 (55%), Gaps = 5/334 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + INQIAAGE+IERP+ +KEL+EN++DA ++ V I GG ++TDNG G Sbjct: 4 IRVLDQNTINQIAAGEVIERPASVVKELLENAIDARATAVTIEIKEGGIGLIRVTDNGCG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + EEIP A RH TSKI +D + + GFRGEAL SI +V+ + L+++ + +G + Sbjct: 64 IPREEIPTAFLRHATSKIRTVEDLFTVASLGFRGEALSSIASVAQVELITKTEDSMSGTR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + S+ V GT VR+LF+ PAR FLK+ E I D++ ++++++P Sbjct: 124 YCIDGGEEKSIEEVGAPEGTTFLVRNLFYNTPARRKFLKTPATEGAHIADLVEKISLSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +VS F +R S N + + I + G + +N + ++ + + + G+ G P Sbjct: 184 EVSIRFIQNGQSRLH---TSGNHSLRDIIYTIYGREIASNLLPVDMGEDPVRVTGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 RGN N FINGR ++ I I AY + +YP +L I+ +DVNVH Sbjct: 241 LIARGNRNFENYFINGRYIKSSLINKAIEDAYKPFMMQHKYPFTMLHFAIESSFLDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 PAK +RFR+ +I + ++ A+ + + Sbjct: 301 PAKMELRFRDGEMIYKMVYHTVSMALAGRELIPE 334 Score = 197 bits (502), Expect = 3e-48, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 3/261 (1%) Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 + ++ A A + + K N + S Sbjct: 475 HAPAKEQESLGVRSPGASDEDESGRAARVQAAKAKGQQDGQDGGGNPEVSGQPEQLSLFE 534 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 + EA Q+ Y + + D L I+DQHAAHE++++EK S + T Sbjct: 535 PKLLSREAREEH--RIIGQLFDTYWLVEYRDSLYIIDQHAAHEKVLYEKTVASLKSREYT 592 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 SQ + P I+ L E L+ ++ E +G + E FG A+R +PA L +LL Sbjct: 593 SQMINPPIILTLNSSEKLLLEKYMEHFTGIGFEIEPFGGREYAVRAVPANLFSIAKKELL 652 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 ++ID + D D + +A+M+C +++ ++ E L+ E+ + N C Sbjct: 653 MEMIDGLSDEMDRGN-SDLLNEKIASMSCKAAVKGNHRLSEAEARALIDELLELENPYAC 711 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 HGRPT I + ++EK F R Sbjct: 712 PHGRPTIISMSRYELEKKFKR 732 >gi|325680314|ref|ZP_08159874.1| DNA mismatch repair protein, C-terminal domain protein [Ruminococcus albus 8] gi|324108023|gb|EGC02279.1| DNA mismatch repair protein, C-terminal domain protein [Ruminococcus albus 8] Length = 713 Score = 357 bits (916), Expect = 3e-96, Method: Composition-based stats. Identities = 123/417 (29%), Positives = 206/417 (49%), Gaps = 6/417 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR LS ++ IAAGE+I+RP+ +KEL+EN++DA ++ + I GG+++ ++TDNG G Sbjct: 4 IRVLSREVSELIAAGEVIDRPASVVKELLENAIDAGATNITVEIKNGGRTYMRVTDNGKG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++P A RH TSKIS DD +I T GFRGEAL SI AV+ + ++++ ++ G Sbjct: 64 IAPDDLPTAFLRHATSKISQKDDLDSIMTLGFRGEALASICAVAKVDVLTKRKDDSYGTH 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 AI G + + GT VRD+F+ +PARL FLK + E N + D++ ++ +++P Sbjct: 124 YAIEGAEEKTSEQCGCPDGTTFVVRDIFYNVPARLKFLKKDSSEANHVADLVTKLTLSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF + +G + V G +F N+ +E++ I + G+ P Sbjct: 184 DISFKLIRDNKTEL---LTAGDGKIYSAVYSVYGREFANSLIEVDYTWQGIHVHGHAVKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + N F+NGR V+ K + + AY I +G++P VL +++ P VDVNVH Sbjct: 241 LEAKLNRKFQNFFVNGRFVKSKACAAALEEAYRNNIMVGKFPACVLYIDVPPNTVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKTHLPKYA 359 P K +RF + ++ + +++ A+ ++ VL KK S H+ P Sbjct: 301 PTKIEVRFSDEKLMHEAVYFAVKNALMERDAPREMVLDKKKNFSAHELYDFPPEDNSVQL 360 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 +E L + S + + T E A + Q Sbjct: 361 EFGVEEKETLTEEVPADSIREEMVKPVVTEPAKEMMTPEQPAPQPKHEPEKIQYQPM 417 Score = 152 bits (384), Expect = 2e-34, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 4/270 (1%) Query: 326 INKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 I+++ L + S APK + +++ L + + Sbjct: 445 IDEESRKAGEDLFLSELGSAEPAPAPKPKEKITVEEINKVLQEMPLPDAPDENDSSFHYI 504 Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 + E + I ++ + Y+++Q D ++++D+HAAHER IFEK++ Sbjct: 505 SGRSFVRSVVQEVKRTPNKPKPIVVGELFKTYVVAQAGDEMLLMDKHAAHERYIFEKIKG 564 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 D ++ +Q LL P ++ L E + + + L RLG + E +A++ +P IL Sbjct: 565 DI--NELETQMLLEPVMVMLSYEEYDALAANVDKLGRLGFEIEPDVAPTVAVKGVPIILG 622 Query: 506 -KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 KN +++ + I L D +++ ++AC +I++ IE+ LL + Sbjct: 623 ADKNPTEVVTALAKNFIQCKHDPQL-DIFDDLYHSLACKAAIKANDDSTLIELQALLNAV 681 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +N + C HGRP IKL DIE+ F R Sbjct: 682 YENNETRYCPHGRPVLIKLTKKDIERQFRR 711 >gi|281412084|ref|YP_003346163.1| DNA mismatch repair protein MutL [Thermotoga naphthophila RKU-10] gi|281373187|gb|ADA66749.1| DNA mismatch repair protein MutL [Thermotoga naphthophila RKU-10] Length = 510 Score = 357 bits (916), Expect = 3e-96, Method: Composition-based stats. Identities = 156/596 (26%), Positives = 274/596 (45%), Gaps = 88/596 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+I++L E +I +IAAGE+I PS +KEL+ENSLDA++ R+ I GGK+ +++DNG Sbjct: 1 MRIKRLPESLIRKIAAGEVIHNPSFVLKELVENSLDAQADRIVVEIENGGKNMVRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GMT EE +A++ + TSKI +D I T+GFRGEAL SI VS ++++ ++ Sbjct: 61 IGMTREEALLAIEPYTTSKIESEEDLHRIRTYGFRGEALASIVQVSRTKIVTKTEKDALA 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ I+G K+ + + GT VEVRDLFF +P R LKS +E + ++ R + Sbjct: 121 TQLMIAGGKVEEISETHRDTGTTVEVRDLFFNLPVRRKSLKSSAIELRMCREMFERFVLV 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V F F++ ++ N ER + +I ED + E+ + + ++G Sbjct: 181 RNDVDFVFTSDGKI---VHSFPRTQNIFER-AILILEDLRKGYITFEEELSGLRIKGIVS 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 R + Y ++NGR V + + + Y +P YPV VL +E++P ++DVN Sbjct: 237 SREVTRSSRTGEYFYVNGRFVVSEELHEVLMKVYD--LPKRSYPVAVLFIEVNPEELDVN 294 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 +HP+K ++F N ++ + +++++ + +K + Sbjct: 295 IHPSKIVVKFLNEEKVKKSLEETLKRNLARKWYRS------------------------- 329 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 + +S++ L ++ P+Y + Y Sbjct: 330 ------------VAYEEISSHALSVAESPSYRW-------------------FLVKGKYA 358 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + + DGL+ VD HA HER I+E++ + K + +T L E + Sbjct: 359 VVEVEDGLLFVDLHALHERTIYEEILSKKSWRKRRVKRNIT----------VVLSREEKQ 408 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L G + A+ + EIP L++ + + RD + ++++ +A Sbjct: 409 KLEEYGFSFQGE-EGALKVIEIPEFLTEDVVEEFFRDF-----------PVDEKLKERIA 456 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC + +SG E+ L ++ +C HGRP K+ D+++ F R Sbjct: 457 LAACKLATKSGEF--DEEIASKLLDVFFKKRFERCPHGRPISFKISYEDMDRFFER 510 >gi|226324942|ref|ZP_03800460.1| hypothetical protein COPCOM_02734 [Coprococcus comes ATCC 27758] gi|225206290|gb|EEG88644.1| hypothetical protein COPCOM_02734 [Coprococcus comes ATCC 27758] Length = 356 Score = 357 bits (916), Expect = 3e-96, Method: Composition-based stats. Identities = 125/350 (35%), Positives = 194/350 (55%), Gaps = 6/350 (1%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I L + I++IAAGE+IERP+ +KEL+EN++DA S+ V I GG S +ITDN Sbjct: 1 MPHIELLDQITIDKIAAGEVIERPASVVKELVENAIDAGSTAVTVEIEEGGISLIRITDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +++ A RH TSKI +D +++ + GFRGEAL SI AV+ + L+++ ++ Sbjct: 61 GCGIAKQDVENAFLRHSTSKIRSAEDLTHLSSLGFRGEALSSISAVARVELITKTREDVF 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G K + GT VR LFF PAR FLK+ E + I+D++ R+A+ Sbjct: 121 GTKYIIEGGKGRTPEETGAPDGTTFLVRQLFFNTPARRKFLKTPMTEASHISDLLTRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P +SF F + S NG + I + G + NN + L + + + L GY Sbjct: 181 SHPDISFRFINNGQVKLH---TSGNGKMKDVIYHIYGREIANNLIPLEFEKDGVRLSGYL 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P NRGN N F+NGR V++ + I Y + RYP V +EI+P ++DV Sbjct: 238 GKPVINRGNRNFENYFVNGRYVRNSILAKAIEDGYKDFTMQHRYPFVAFQIEINPEKIDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 NVHP+K +RF N I N + ++I K +++ + +S+ + + Sbjct: 298 NVHPSKMELRFSNQQGIYNLLYEAISKGLHEPELIPEVEMSEIKVPGMSE 347 >gi|15806699|ref|NP_295419.1| DNA mismatch repair protein MutL [Deinococcus radiodurans R1] gi|20455164|sp|Q9RTR0|MUTL_DEIRA RecName: Full=DNA mismatch repair protein mutL gi|6459465|gb|AAF11253.1|AE002011_4 DNA mismatch repair protein MutL [Deinococcus radiodurans R1] Length = 547 Score = 357 bits (915), Expect = 4e-96, Method: Composition-based stats. Identities = 144/598 (24%), Positives = 245/598 (40%), Gaps = 73/598 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L + IAAGE++ RP ++EL+EN+LDA +SR+E + GGG Q+ DNG Sbjct: 4 PIHVLPPHVARLIAAGEVVSRPLDVVRELVENALDAGASRIEIEVDGGGLERVQVRDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKISDDFS----NIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+ ++ +P+A RH TSK++ ++ T GFRGEAL + L L +RP Sbjct: 64 GIAAQSVPLAPARHATSKLTAGPETGSLSVTTLGFRGEALWAAAQAGELELTTRPAAQVG 123 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 A++ G+ + R GT V V LF +PARL S E IT ++ R + Sbjct: 124 AARLRAQGDAVEVSRTS-APAGTTVTVSQLFARLPARLRTQASAAAEVRDITALLGRYVL 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + + + R + ++ V G N + L+ ++G Sbjct: 183 HHSALHWRLTVDGDPRLT----HAPADHRGAVATVYGPLSANRVLTLDTP----GVRGVV 234 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFI-LSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P R ++ + +NGR + + AYAE +P G P+ VL L + P D Sbjct: 235 SRPELTRARRDRMHFAVNGRPIVAPPELERAVIDAYAELLPAGTAPLCVLDLTVAPEDYD 294 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 N+HPAK + + + + ++ A+ + ++ P Sbjct: 295 PNIHPAKQVVALADLPAVALRVRDAVAGALAGHPLVRAAPALIA------------PPEP 342 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 A + N + + Sbjct: 343 HPAPTAGNFPD---------------------------------------LTLLGVYQEL 363 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y+++Q L +VD HAAHER ++E++ L TPE++ L + A + E Sbjct: 364 YLLAQGEGDLWVVDAHAAHERALYERL--GRELGTAAPLELPTPELLHLTPEQTARLHER 421 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 +L G+ E FG +R +PA L+ +P+L +++ + D + Sbjct: 422 GAELRGWGLTIEDFGAGLARLRTLPAALAALPVPRLHEVVVETALSGG-----PDPRREV 476 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LA +AC ++++G + + +L + + C HGRPT ++L D+ FGR Sbjct: 477 LARLACLPALKAGM-LDAERGALVLAALRECEQPWACPHGRPTVLRLSERDLAHAFGR 533 >gi|24372192|ref|NP_716234.1| DNA mismatch repair protein MutL [Shewanella oneidensis MR-1] gi|81845917|sp|Q8EJ70|MUTL_SHEON RecName: Full=DNA mismatch repair protein mutL gi|24346101|gb|AAN53679.1|AE015507_5 DNA mismatch repair protein MutL [Shewanella oneidensis MR-1] Length = 631 Score = 356 bits (914), Expect = 5e-96, Method: Composition-based stats. Identities = 133/371 (35%), Positives = 202/371 (54%), Gaps = 6/371 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA +SR++ I GG +I DNG Sbjct: 1 MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIEIDKGGSKLIKIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSK+ DD I +FGFRGEAL SI +VS LTL SR + + Sbjct: 61 SGIPKEELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQSEA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G ++ V P A G+ +EV DLFF PAR FLKS++ E I + ++R+A+ Sbjct: 121 WQAYAEGVEMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + FT + + +R++QV G F + A+ + + +++ L GY Sbjct: 181 VRGDIHFTLTHNGKTVRNYRPAMNEPQYLQRLTQVAGRPFADEALRVECQHDDLRLSGYL 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + + Y ++NGR V+D+ + +R A+A+ P VL+L+IDP QVDV Sbjct: 241 QSPW-STVLTDTHYFYVNGRLVRDRLVNHAVRQAFAQK-AEVEQPGYVLMLDIDPHQVDV 298 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF + ++I+Q++Q A+ + G I P+T Sbjct: 299 NVHPAKHEVRFHQSRYVHDYILQALQSALEEAGELRFEP-HSPQIDDSSPYVKPETESSA 357 Query: 358 YATSLTNTQEK 368 + T + K Sbjct: 358 FELQSTESNAK 368 >gi|270158033|ref|ZP_06186690.1| putative DNA mismatch repair protein MutL [Legionella longbeachae D-4968] gi|289163699|ref|YP_003453837.1| DNA mismatch repair protein MutL [Legionella longbeachae NSW150] gi|269990058|gb|EEZ96312.1| putative DNA mismatch repair protein MutL [Legionella longbeachae D-4968] gi|288856872|emb|CBJ10683.1| DNA mismatch repair protein MutL [Legionella longbeachae NSW150] Length = 544 Score = 356 bits (913), Expect = 7e-96, Method: Composition-based stats. Identities = 151/535 (28%), Positives = 261/535 (48%), Gaps = 45/535 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L I NQIAAGE+IERP+ +KEL+ENS DA ++ + + GG + +I+DNG Sbjct: 4 RIRQLPPFIANQIAAGEVIERPASVVKELLENSFDAGATAITVETSYGGLNQIKISDNGV 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++P+A+ H TSKI+ DD I + GFRGEAL SI +V+ +++ S+P T Sbjct: 64 GIFAEDLPLAIAPHATSKINSLDDLYAIDSMGFRGEALASIASVAKVSISSKPALQETAM 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + ++ P A GT V+V DLFF P R FLKSE++E I V++R A++ Sbjct: 124 MLRVIGTE-TTCSPCARAVGTTVDVVDLFFNAPVRKRFLKSEKLEFQAIETVVKRFALSA 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PK++ T + + ++ R+++++G F+ +A+ L+ + L+G+ Sbjct: 183 PKIALTLKHNGKQVFYLPAVTSEHALLSRMTRILGSAFVQDAIYLDVDHGSMKLRGWISG 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 F R +++ +V+IN R V+DK I ++ AY + GR+P VL I+ +VDVNV Sbjct: 243 IKFQRSQSDRLWVYINERMVKDKLIHHALKQAYEGLLHPGRFPACVLYFTINHAEVDVNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RF+ P +I +F + A+ + + + I +Q PK A Sbjct: 303 HPTKHEVRFQQPRLIFDFFTSQLAAALATQTKKNPDPICELNIP-VNQAKEIYEPYPKLA 361 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 SE + +E+ ++ +YI+ Sbjct: 362 ----------------------------LISEHVNSLEQP----------WVILNNHYIL 383 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 IV+ A + +++ S + S+ LL P L + + + Sbjct: 384 VFLHQQPYIVNLVALQQFKAQQQL--AGLSFPLASRPLLVPIRCSLPSKIAPKLPDFIQS 441 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 L++LGI E G + IR IP + ++ +L + + + +++ + IE Sbjct: 442 LYQLGIHVEHIGDQDVFIRSIPLCMPYLDL-RLFLEALTRLEVINSSKLTELMIE 495 >gi|304404424|ref|ZP_07386085.1| DNA mismatch repair protein MutL [Paenibacillus curdlanolyticus YK9] gi|304346231|gb|EFM12064.1| DNA mismatch repair protein MutL [Paenibacillus curdlanolyticus YK9] Length = 684 Score = 355 bits (912), Expect = 1e-95, Method: Composition-based stats. Identities = 124/366 (33%), Positives = 196/366 (53%), Gaps = 5/366 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L E++ NQIAAGE++ERP+ +KEL+EN++DA ++ ++ I GG + ++ DNG G Sbjct: 4 IRVLDEQLANQIAAGEVVERPASVVKELVENAVDAGATTIDLTIEEGGLNLIRVIDNGAG 63 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +EI A QRH TSK+ S D I + GFRGEALPSI AVS +T +S P ++ G Q Sbjct: 64 IEPDEIETAFQRHATSKLLSSADLFRIASLGFRGEALPSIAAVSRVTCISSPTKDGLGKQ 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I G + PV+ GT + VRDLF+ PARL ++KS Q E I+D + R+A+A+P Sbjct: 124 LVIEGGTVQQSGPVSAPQGTEMSVRDLFYNTPARLKYMKSIQTELGHISDYVNRIALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F+ + ++ G+ + I+ V G + + ++ + L GY P Sbjct: 184 GIAFSLKHNGN---ELLRTPGTGDRLQVIAAVYGTSTAKAMLPVEGETPDYVLTGYVSKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N V +NGR ++ + + Y +P+ R+P+V L + + P +DVNVH Sbjct: 241 ELTRANRNAITVIVNGRYIRSFLVNQALLQGYHTLLPINRFPLVTLEIAMHPSLLDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P+K +RF T +R I QS++K + + S S + + Sbjct: 301 PSKMEVRFSKETELRELIEQSVKKTLGRDRYIPEPAASGDQERSKPVYVQERIAFHRPEP 360 Query: 361 SLTNTQ 366 S + Sbjct: 361 SFPASA 366 Score = 208 bits (530), Expect = 2e-51, Method: Composition-based stats. Identities = 63/267 (23%), Positives = 109/267 (40%), Gaps = 4/267 (1%) Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 ++ I + I + P + Q S P Sbjct: 419 RESIPPDATERLYAIPPAADERVNAVREPSMDDADFYAPAPAEQQAQPASEQRASTGLPP 478 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 + + D E + Q+H Y+I+Q+ DGL ++DQHAAHER+ +E + F Sbjct: 479 RIAVERD----PETPPFPELSWIGQLHGTYLIAQSEDGLYMIDQHAAHERIHYEYYVEKF 534 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + SQ LL P ++L GE A + + E L +G++ E FG N +R P L Sbjct: 535 GRPQQASQQLLVPITLELTAGEAAQLHDKLELLAEVGLELESFGANTFLVRAHPEWLPAG 594 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 + ++ ++I+ ++ +Q E +C SI++ +++ E LL + Sbjct: 595 DEQSIIEEMIEWVLQEKRNVDIQKLREKTAIMCSCKASIKANQRLTREEGEALLDRLGAC 654 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP + + +EK+F R Sbjct: 655 GQPYTCPHGRPIVVHISSYQLEKMFKR 681 >gi|307184301|gb|EFN70759.1| Mismatch repair endonuclease PMS2 [Camponotus floridanus] Length = 672 Score = 355 bits (910), Expect = 2e-95, Method: Composition-based stats. Identities = 132/656 (20%), Positives = 274/656 (41%), Gaps = 78/656 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI ++++ I+ I +G+++ +IA+KEL+ENSLD+ ++ ++ + GK+ ++DNG Sbjct: 13 KIEAINKETIHHICSGQVVFDLAIAVKELVENSLDSNATVIDVKLIDYGKTCISVSDNGS 72 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ +H TSK+ + D + ++TFGFRGEAL S+ A+S L++++R + G Sbjct: 73 GVLEQDFEGLGLKHHTSKLREFTDLTEVNTFGFRGEALSSLCALSELSIVTRHSTSKHGF 132 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 ++ + + P A GT V ++++F +P R F K+ + E V+ + Sbjct: 133 KLEFDQNGMLTKKEPCAREKGTTVHIKNIFKNLPVRAKEFQKNLKKEYTRAIQVLYSYCL 192 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK-------- 227 + S + + + + + + I+ V G+ ++ ++L + Sbjct: 193 VSTNIKIACSNLIASKSPHLIVTTRNTDSVLDNINSVFGKKSLDGIIKLELQSPDETTLQ 252 Query: 228 --------SNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIP 277 + + + Y G + ++ + ++NGR + + Y + Sbjct: 253 EYNLSNDVTIDFDWECYVSTCDHAIGRSSPDRQFFYVNGRPCDLTKVSKLVNNVYHKY-N 311 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL 337 +YP V L ++++ + DVNV P K I F +I + S+ +K + ++ Sbjct: 312 NKQYPFVFLNVKLNRQCADVNVTPDKRTIFFTQERLILATLKFSLTAKWDKLQGNFTAKP 371 Query: 338 SKKMISSFHQDNAPKTHLP-----KYATSLTNTQEKLFLQEN------------------ 374 ++ F + + P + + S+++ + +Q N Sbjct: 372 LTELKFGFKRTISSNYVHPPAKRLQISPSISHMAKNDDIQTNIKSMKKPIDVEMTISFTI 431 Query: 375 ------------RLSTNDLLPSDDPTYSEDNDPVEESE------ATHYQLGIACAQIHQN 416 R N E N E E + Q + Sbjct: 432 IKEKLKEKKIIVRAPVNIEKRIKYRIQMEANQDEAEKELQRELTKDSFGKMEVIGQFNLG 491 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 +II++ + L I+DQHA E+ FEK+ N TK+ +Q L+ P+ ++ +++EH Sbjct: 492 FIITRLENDLFIIDQHATDEKFRFEKL---SNETKLKTQKLIVPKPMNFSALSETILIEH 548 Query: 477 DEDLHRLGIKAERFG----PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT---- 528 + G I + +P + + + +++ I ++ Sbjct: 549 QKMFEDNGFTFNINEQAELGKKIELIGMPVSGHWQFGQEDIEELVFLIREAGNEIKEKHI 608 Query: 529 -LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R+ +LA+ AC ++ G + + EM++L+ +M + N C HGRPT + Sbjct: 609 FRPSRVRQMLASRACRSAVMIGTALNTNEMHKLIMQMAQMQNPWNCPHGRPTIRHI 664 >gi|332531849|ref|ZP_08407734.1| DNA mismatch repair protein MutL [Pseudoalteromonas haloplanktis ANT/505] gi|332038825|gb|EGI75267.1| DNA mismatch repair protein MutL [Pseudoalteromonas haloplanktis ANT/505] Length = 615 Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats. Identities = 150/555 (27%), Positives = 259/555 (46%), Gaps = 41/555 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MNIEILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIQIDIERGGHKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +E+ +A+ RH TSK+ DD NI + GFRGEAL SI +VS LTL S+P + Sbjct: 61 AGISKDELTLALSRHATSKLKSLDDLENICSLGFRGEALASISSVSRLTLSSKPKEQEAA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + V+PVA GT +EV+DLFF PAR FL++E+ E + I ++I+R+A+ Sbjct: 121 WQAFAEGRDMAVQVKPVAHPDGTTIEVKDLFFNTPARRKFLRTEKTEFSHIDELIKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + VS T + + + ++ R++QV G+ F + + + L G+ Sbjct: 181 SRFDVSITLTHNEKVVRQYRAKTDPSQAITRVAQVAGKAFAEQGLHIQSGEGGLQLHGWV 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 Y ++N R ++DK IL IR A+ E P V+ ++IDPRQVDV Sbjct: 241 LPVGSANTT---QYTYVNNRMMRDKLILHAIRQAFEEVSGTQELPGFVIYIDIDPRQVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKA---INKKGISTSSVLSKKMISSFHQDNAPKTH 354 NVHPAK +RF +I +FI+Q+I++ + + + S+ + +F + + Sbjct: 298 NVHPAKHEVRFHQGRLIHDFILQAIKQVVVPLQGEFTNESASTEAEFTPAFIESTHSSAN 357 Query: 355 LPKYATSLTNTQEKL-----------------------FLQENRLSTNDLLPSDDPTYSE 391 + + +L + S +D+ + Sbjct: 358 NIESEGVFDYPKSQLQPSYSGSTGSSSSSSGTRSVGGAYRAAPSTSHHDVNAFYQGVSEQ 417 Query: 392 DNDPVEESEATH--YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + + ++ + + I ++G+ + + F+ D Sbjct: 418 HAAHFDNAANISAAPHQSVSVDNVLKAVSIISVSEGVCVFSEEQQLYCSHFKYALVDDWH 477 Query: 450 TKI------TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 +I + LL P ++L + +C LI LG + + ++++PA Sbjct: 478 NQIKEFGSLEGKALLLPVRVNLEKEDCLLIESQQSWFTLLGFEL-VIEKQFVMVKKLPAC 536 Query: 504 LSKKNIPQLLRDIID 518 L ++ + +++D Sbjct: 537 LYLLDVSAAVGELLD 551 >gi|238026311|ref|YP_002910542.1| DNA mismatch repair protein [Burkholderia glumae BGR1] gi|237875505|gb|ACR27838.1| DNA mismatch repair protein MutL [Burkholderia glumae BGR1] Length = 703 Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats. Identities = 132/367 (35%), Positives = 211/367 (57%), Gaps = 11/367 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA ++ + + GG ITD+G G Sbjct: 32 IQPLPDQLISQIAAGEVVERPASVVKELLENALDAGATTLRIALDEGGVKRISITDDGCG 91 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + ++ T GFRGEAL SI +VS L + SR Q + Sbjct: 92 IPADELPLALMRHATSKIRSLVELESVATLGFRGEALASIASVSELAITSRTEQAPHATR 151 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ P A GT +EVR+L+F PAR FLKSEQ E ++IRR+A+A P Sbjct: 152 IDADT---GALSPAAGTRGTTIEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRVALARP 208 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++GE F + L+E++ + + G G+P Sbjct: 209 DVAISVLHNGRAVEHWNASEP----AVRVAKILGEGFATAHLPLDEQAGPLAVYGCAGLP 264 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 265 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 324 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P+K +RFR+ I ++ ++Q+A+ + +S + + H A ++ P+ A Sbjct: 325 PSKIEVRFRDSRSIHQYVFHAVQRALARHAG--ASPGTTAGGHAAHLAPAGESAAPERAP 382 Query: 361 SLTNTQE 367 + + Q Sbjct: 383 AGSAGQA 389 Score = 209 bits (532), Expect = 1e-51, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 109/188 (57%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 G A Q+H Y+++Q GLVIVD HAAHER+++E+ + + I Q+LL P + Sbjct: 514 GFALGQVHGIYVLAQNAQGLVIVDMHAAHERILYEQFKTALANRAIAVQSLLLPVTMAAT 573 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 E E E L LG P +AIR +PA+L ++P L R ++ ++ + + Sbjct: 574 PVEIGTAEEERETLDALGFDLATLSPTTLAIRAVPALLRDADLPTLARAVLADLHEFGGS 633 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRPT+ +L L Sbjct: 634 RVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLG 693 Query: 587 DIEKLFGR 594 D+++LF R Sbjct: 694 DLDRLFMR 701 >gi|88858902|ref|ZP_01133543.1| Enzyme in GATC methyl-directed mismatch repair [Pseudoalteromonas tunicata D2] gi|88819128|gb|EAR28942.1| Enzyme in GATC methyl-directed mismatch repair [Pseudoalteromonas tunicata D2] Length = 616 Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats. Identities = 160/554 (28%), Positives = 263/554 (47%), Gaps = 44/554 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L ++ NQIAAGE++ERP+ +KEL+ENSLDA +++++ I GG +I DNG Sbjct: 1 MNIEILPARLANQIAAGEVVERPASVVKELVENSLDAGATQIQIDIDRGGHKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSK+ DD NI + GFRGEAL SI +VS LTL S+P + Sbjct: 61 SGVYKDELTLALSRHATSKLKTLDDLENICSLGFRGEALASISSVSRLTLSSKPADQSDA 120 Query: 119 AQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + +V+P A GT +EV DLFF PAR FL++E+ E N I ++++R+A+ Sbjct: 121 WQAFAEGRDMAVTVKPTAHPNGTTIEVVDLFFNTPARRKFLRTEKTEFNHIDELLKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + V+ T + +RI+QV G++F++ A+ L + +++ G+ Sbjct: 181 SRFDVAITLKHNGKIVRQYRPVMKKEEQVKRIAQVAGKEFLSQALFLESGDDGLSIFGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + Y ++NGR ++DK IL IR A+ E+ P P VL L I+PRQVDV Sbjct: 241 LPPGSSVEP---QYTYVNGRMMRDKLILHAIRQAFEESCPGIDVPAFVLYLTINPRQVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI----SSFHQ------ 347 NVHPAK +RF ++ +FI+Q++++A S ++ S HQ Sbjct: 298 NVHPAKHEVRFHQARLVHDFILQAVKQAAQPNQCVVSEIVQCNEQVESGFSEHQSLFNDL 357 Query: 348 DNAPKTHLPKYATSLTNTQEK------------LFLQENRLSTNDLLPSDDPTYSEDNDP 395 A + P + TQ K Q+ + + N ++ D Sbjct: 358 SQAHEFKAPPMGGFASQTQNKGSSQGYQPKPLVPQAQKQQQNVNAFYQGVAEQRAQHFDS 417 Query: 396 VEESEATHYQLGIACAQIH-----------QNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 V E+ T + H + +I Q+ + QH E + E Sbjct: 418 VSENTVTPHFELQNHTASHLLVTEMMVLQSGHCVIKQSDALQLSHLQHVLAEFWLEE--- 474 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 +I S+ LL P + + + L LG + + + ++ +P + Sbjct: 475 -ISQHAQIESKALLLPVRVAIDASAQIQLDTQLSWLTILGYEL-QLNTGFVMVKRLPPAV 532 Query: 505 SKKNIPQLLRDIID 518 ++ +++ ++ Sbjct: 533 YAHDVNEVIDALLA 546 >gi|254253154|ref|ZP_04946472.1| DNA mismatch repair enzyme [Burkholderia dolosa AUO158] gi|124895763|gb|EAY69643.1| DNA mismatch repair enzyme [Burkholderia dolosa AUO158] Length = 503 Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats. Identities = 123/359 (34%), Positives = 203/359 (56%), Gaps = 9/359 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA ++ + V+ GG ITD+G G Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGATTLRIVLEEGGVKRISITDDGCG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+P+A+ RH TSKI ++ + T GFRGEAL SI +V+ +++ SR + Sbjct: 83 IPPDELPLALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMSITSRTADVPHATK 142 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + ++ P A GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 143 I---DAQTGALSPAAGAVGTTIEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRAALARP 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N +R+++++G+ F + L+E++ + + G G+P Sbjct: 200 DVAISVLHNGKAVEHWNATEP----AQRVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 255 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 256 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 315 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 P+K +RFR+ I ++ ++Q+A+ + ++ + + A Sbjct: 316 PSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPQTTAGGHAAHLQPAAASPESFRSTP 374 >gi|160892635|ref|ZP_02073425.1| hypothetical protein CLOL250_00165 [Clostridium sp. L2-50] gi|156865676|gb|EDO59107.1| hypothetical protein CLOL250_00165 [Clostridium sp. L2-50] Length = 681 Score = 353 bits (907), Expect = 3e-95, Method: Composition-based stats. Identities = 133/383 (34%), Positives = 211/383 (55%), Gaps = 9/383 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + I++IAAGE+IERP IKEL+ENS+DA ++ + I GG SF +ITDNG G Sbjct: 2 IKLLDQYTIDKIAAGEVIERPGSVIKELVENSIDAGATAITIEIKEGGMSFIRITDNGCG 61 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ EE+P+A RH TSK+ +DD I + GFRGEAL SI AV+ + L+++ TG + Sbjct: 62 ISKEEVPVAFLRHATSKLQTADDLLKIASLGFRGEALSSIAAVAQVELITKQEDALTGTR 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G K S + GT + VR+LF+ PAR F+K+ E + I D++ RMA+++P Sbjct: 122 YQIHGGKEISNEEIGAPLGTTIVVRNLFYNTPARKKFMKTPATEGSYIYDLVCRMAMSHP 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 VSF F +++ F S NG E I + G D NN +E+N ++++ + GY P Sbjct: 182 DVSFKFIMNGTDKL---FTSGNGRLKEIIYHIYGRDITNNLLEINAANDQVKITGYLAKP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + +RGN + ++N R ++ + I AY + + ++P V+ EIDP +DVN+H Sbjct: 239 SISRGNRSFEDYYVNQRYIKSNILTKAIEDAYRTFVMVHKFPFTVINFEIDPSLIDVNIH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM----ISSFHQDNAPKTHLP 356 PAK ++F N + +F S++KA+ K + + K M ++ + P+ Sbjct: 299 PAKRELKFINEPDMYDFTYISVRKALLFKELIPTVTPGKDMRPETLAERKVEKRPEPFEA 358 Query: 357 KYATSLTNTQEKLFLQENRLSTN 379 + Q Q+ + S Sbjct: 359 NRRAAELPPQPARPAQQKKPSMP 381 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 68/305 (22%), Positives = 124/305 (40%), Gaps = 7/305 (2%) Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 + P ++ P + + + K N+ G + ++ + + I + Sbjct: 382 MQPANSGISAQPTPT-PSVTMENRSSSPVEIQYLKEDNQSGKNITNNMVAENIVPYLTQP 440 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 P A TN + QE + + + E + Sbjct: 441 TKTALNPAEAGVQTNETSEQKKQEPITPEAKVKYEQMDMFEDKFLTPEAKKKH-----RI 495 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q+ + Y + + D I+DQHAAHE++ FE++ ++ + Q L+ P I+ L E Sbjct: 496 IGQLFKTYWLIEYEDKFFIMDQHAAHEKVKFEELMANYKNKTAIPQYLMPPAIVSLSGTE 555 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 + E+ E LG + E FG + +PA L + +L + I E+ ++ T+ Sbjct: 556 SEFLRENLEFFQNLGFQIEGFGGKEYKLSAVPANLFGLDGRELFLEFIGELSENGQKQTI 615 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 I L+TMAC +I+ + E + L+ ++ K N C HGRPT I + +++E Sbjct: 616 DTFISK-LSTMACKAAIKGNTSISFKEADTLIDQLMKLENPYTCPHGRPTLISMTETELE 674 Query: 590 KLFGR 594 K F R Sbjct: 675 KKFKR 679 >gi|167586247|ref|ZP_02378635.1| DNA mismatch repair protein MutL [Burkholderia ubonensis Bu] Length = 440 Score = 353 bits (907), Expect = 3e-95, Method: Composition-based stats. Identities = 131/394 (33%), Positives = 216/394 (54%), Gaps = 18/394 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA ++ + V+ GG ITD+G G Sbjct: 26 IQPLPDQLISQIAAGEVVERPASVVKELLENALDAGANTLRIVLEEGGVKRISITDDGCG 85 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+P+A+ RH TSKI ++ + T GFRGEAL SI +V+ + + SR + Sbjct: 86 IPPGELPLALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMFITSRTADAAHATR 145 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 146 I---DAQTGVLAPAAGAVGTTIEVRELYFNTPARRKFLKSEQTEFGHCVEMIRRAALARP 202 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N +R+++++GE F + L+E++ + + G G+P Sbjct: 203 DVAISVLHNGKAVEHWNATEPT----QRVAKILGEGFATAYLPLDERAGPLAVYGCAGLP 258 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 259 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 318 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV---------LSKKMISSFHQDNAP 351 P+K +RFR+ I ++ ++Q+A+ + ++ + +SF Sbjct: 319 PSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAHIAAAPGPASFQSTPLG 378 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 + + + T +Q +L++ R++ L + Sbjct: 379 QAASGGGSPAPTPSQGSTWLRQARMTQGTLPVAQ 412 >gi|238693283|sp|B4S1F7|MUTL_ALTMD RecName: Full=DNA mismatch repair protein mutL Length = 608 Score = 353 bits (907), Expect = 4e-95, Method: Composition-based stats. Identities = 134/379 (35%), Positives = 201/379 (53%), Gaps = 5/379 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS ++ NQIAAGE++ERP+ +KEL+ENSLDA ++++E I GG +I DNG Sbjct: 1 MPIQLLSPQLANQIAAGEVVERPASVVKELLENSLDAGATKIEIDIEKGGHKRIRIKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR Sbjct: 61 SGIEKNELQLALSRHATSKITTLDDLEQILSLGFRGEALASISSVSRLTLTSRTQAQTEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G +++ +++P A GT ++V DLF+ PAR FL++E+ E I +VI+R+A+ Sbjct: 121 WQAYCEGREMAVNIQPAAHPVGTTIDVADLFYNTPARRKFLRTEKTEFQHIEEVIKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 +YP VSF + G+ RI V+G+ FI NAV ++ + + + Sbjct: 181 SYPSVSFVLKHNDKVAKRFIAD-KEGSLTTRIGAVVGQKFIQNAVHIHAAYEGLQIDAWL 239 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G R + + + F+NGR ++DK I+ IR AY + P V+ L +DP+ VDV Sbjct: 240 GNEAMLRSSNDCQFSFVNGRGMRDKLIMHAIRQAYESVWAVIEQPSFVVYLTVDPKDVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF+ ++ +FI +++ A++ S D Sbjct: 300 NVHPAKHEVRFQQGRLVHDFICKTVSDALHAMTDEASLTGMDNK-RHLESDFMSHEVEHD 358 Query: 358 YATSLTNTQEKLFLQENRL 376 Y L E N Sbjct: 359 YIRPLQTQAESSTRAFNEQ 377 >gi|325661607|ref|ZP_08150231.1| hypothetical protein HMPREF0490_00965 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472134|gb|EGC75348.1| hypothetical protein HMPREF0490_00965 [Lachnospiraceae bacterium 4_1_37FAA] Length = 691 Score = 353 bits (906), Expect = 5e-95, Method: Composition-based stats. Identities = 140/414 (33%), Positives = 213/414 (51%), Gaps = 9/414 (2%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I+ L + I++IAAGE+IERP+ +KEL+EN++DA+++ + I GG S +I DN Sbjct: 1 MPNIQVLDQVTIDKIAAGEVIERPASIVKELVENAIDAKATAITVEIKDGGISLIRIADN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ EE+P+A RH TSKI +D + I + GFRGEAL SI A++ + L ++ + + Sbjct: 61 GCGIPKEEVPLAFLRHSTSKIRSVEDLTGIASLGFRGEALSSIAAIAQVELRTKVKEADA 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G Q I G S+ + M GT VR +FF PAR FLK+ E + ++++I R+A+ Sbjct: 121 GIQYRIEGGSEKSMEEIGMPDGTTFFVRQIFFNTPARRKFLKTPMTEASHVSELITRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P++SF F T + S NG + I + G D N +E+N K+N + ++GY Sbjct: 181 SHPEISFQFLTNGQPKLH---TSGNGRLKDVIYHIYGRDITGNLLEINAKANGVAIRGYI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P +RGN N +INGR V+ I I AY +YP VL ID +DV Sbjct: 238 GKPLISRGNRNYENYYINGRYVKSSIIAKAIEDAYKGFTMQHKYPFTVLHFTIDGTDLDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RF + NFI +++ A+++K + LS S K P Sbjct: 298 NVHPTKMEVRFSKQQEVYNFIYNTLKDALSEKELIPRVELSVAEPVSQKSTFLEKAVSPS 357 Query: 358 YATSLTNTQ-EKLFLQ--ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 L + + EK+F++ + + E A H Q Sbjct: 358 VPDVLPDKKNEKVFVEKLPQEARYAEAPSEEKNLDYFMKKMRERVTAYHNQSSQ 411 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 127/273 (46%), Gaps = 4/273 (1%) Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 + ++ I ++ + F Q + + + N QE + RL T Sbjct: 421 YRNQLSTDRIKEAAAYRAEQKKQFGQSEKVQEKIYRKEDKRENLQE-TSQEIARLQTPKE 479 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 D D + + Y Q+ + Y I + D + I+DQHAAHER+++E Sbjct: 480 AEEDTQLNFFDQKLLSKEAKQEY---TLVGQVFETYWIVEYRDQMYIIDQHAAHERVLYE 536 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 + + + TSQ + P +++L E L+ EH E+ ++G + E FG ++ A+R +P Sbjct: 537 RTLKRMKEKQFTSQRISPPIVLNLSMQEEQLLSEHMENFTKIGFEIEPFGGDSYAVRAVP 596 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 L LL +++D + DS +T D + +A+M+C +++ ++ E++ L+ Sbjct: 597 DNLFSIAKKDLLIEMLDSLSDSISTNLAPDIVLEKIASMSCKAAVKGNSRLSGREVDALI 656 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 E+ + N C HGRPT I + ++EK F R Sbjct: 657 GELLELDNPYHCPHGRPTIIAMTKRELEKKFKR 689 >gi|310642432|ref|YP_003947190.1| DNA mismatch repair protein mutl [Paenibacillus polymyxa SC2] gi|309247382|gb|ADO56949.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa SC2] Length = 698 Score = 353 bits (906), Expect = 5e-95, Method: Composition-based stats. Identities = 125/394 (31%), Positives = 198/394 (50%), Gaps = 5/394 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L E I NQIAAGE++ERP+ +KEL+EN++DA +RV+ + GG ++TDNG Sbjct: 3 KIRVLDEHIANQIAAGEVVERPASVVKELVENAIDAGGTRVDVWVEEGGLQSIRVTDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A RH TSKI D I + GFRGEALPSI AVS + L++ + Sbjct: 63 GIEPEDVETAFYRHATSKIGHGRDLFQITSLGFRGEALPSIAAVSKVELLTAAGDDGRAR 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G K+ A GT VRDLF+ PARL ++K+ Q E I+DV+ RMA+++ Sbjct: 123 KLVIEGGKLMLHENAAGRQGTDFTVRDLFYNTPARLKYMKTIQTELGHISDVLYRMALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + NG+ + I+ + G + + + +S + + GY Sbjct: 183 PEVAFTLRHNGN---TLLQTLGNGDLLQVIAAIYGTSAAKSMLMVEGESLDYRISGYVSR 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + R N N +NGR V+ + + AY +P+ RYP+ V+ L++ P VDVNV Sbjct: 240 PEWTRSNRNAISTVVNGRFVRSYGLNQALLKAYHTLLPINRYPLAVIQLDMHPSLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +RF + + S++ + ++ + +V + + H K Sbjct: 300 HPAKLEVRFSKEAELFQLVEDSVKAVLGQQVLIPKAVKREIGGKDSGSFVQEQFHFSKGN 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 ++ +T P + Sbjct: 360 SAKVDTSTDNISSNEESKKFSYEHEQLPNRGSHS 393 Score = 184 bits (466), Expect = 4e-44, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 103/264 (39%), Gaps = 5/264 (1%) Query: 331 ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 IST + SS+ + Y +++ + ++ + L ++ T Sbjct: 438 ISTGDHAETDVSSSYSEGIQETAASATYRPAVSPIADNTTKFTDQKPRQEHLNTEQLTAL 497 Query: 391 EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 E + Q H Y+I+Q GL ++DQHAAHER+ +E + F + Sbjct: 498 SG----AAPEVPTFPELNLIGQHHGTYLIAQNDQGLYLIDQHAAHERVNYEFYYEKFGNP 553 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 + SQ LL P ++ E + + G+ E FG + P L K Sbjct: 554 ESVSQELLLPITLEFTPSETEKLKTRLHWFEQAGVYLEHFGGQTFRVSSYPYWLPKGEEA 613 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 ++ ++ +++ L E +C SI++ +K+ + + LL + Sbjct: 614 DVIEEMAGWVLEEKAID-LAKLREAASIMCSCRASIKANQKLTDRQASVLLERLAACKQP 672 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP + D+EKLF R Sbjct: 673 YTCPHGRPIVVSFSTYDLEKLFKR 696 >gi|298246052|ref|ZP_06969858.1| DNA mismatch repair protein MutL [Ktedonobacter racemifer DSM 44963] gi|297553533|gb|EFH87398.1| DNA mismatch repair protein MutL [Ktedonobacter racemifer DSM 44963] Length = 755 Score = 353 bits (905), Expect = 5e-95, Method: Composition-based stats. Identities = 142/491 (28%), Positives = 228/491 (46%), Gaps = 17/491 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L+ + +IAAGE++ERP+ +KELIENS+DA ++++ + GG ++TDNG Sbjct: 1 MPIRQLAPDVAAKIAAGEVVERPASVVKELIENSIDAGATQIRVDLMNGGLQLIRVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ EE+P+A++RH TSK++ DD I + GFRGEAL SI AV+ +TL+SR + G Sbjct: 61 CGISPEELPLALERHATSKVASIDDLEQIRSLGFRGEALASIAAVAEVTLVSRARGSEQG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +Q+ IS V P A GT + VR+LF +PARL FLKS E + ++ + A+A Sbjct: 121 SQVNAQSGHISDVTPAASPEGTTITVRNLFSAVPARLKFLKSRNTEISHCHHLLEQYALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE-------I 231 YP++ FT ++ ++ +G + QV G VE++ Sbjct: 181 YPEIRFTVASEGK---QIFSTPGDGKLFSVLVQVYGLQIAEQMVEVDGDDEHDASDGEYP 237 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 ++G+ P + F+N R V + + + + AY + GR+P+ V+ ++ID Sbjct: 238 IVKGFVSRPACYKSTRQHISFFVNRRWVMSRMLTTAVEGAYHSLLLSGRHPLAVINIQID 297 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 P +DVNVHPAK+ IRF + I+++ +KA+ ++ + Q +A Sbjct: 298 PSFLDVNVHPAKTEIRFLKERRVFAAILRAARKALLQEPEMPQWKSKSSEPRASSQPDAY 357 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV---EESEATHYQLGI 408 P + L +E + E T D+ + EE T Sbjct: 358 DQE-PSFEGRLDLDEEAVQKDEQEAREAGKPQQRQSTIPGDSPWITFTEEEHGTRPPGHA 416 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 Q H L VD ER + +T T L + L Sbjct: 417 RLWQSHLGVTDKAKGSRLKAVDTTVEVERSPTGTLHAQAEQVSVTLDTSLEEDDP-LSML 475 Query: 469 ECALIMEHDED 479 A +E + Sbjct: 476 PPAAPVEKRPE 486 Score = 165 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 56/201 (27%), Positives = 99/201 (49%) Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 ++ ++ + Q+ Q+Y++++ DG+ ++DQHAAHER++ E+M S + Sbjct: 554 HSIDPNQPRKFPRLRVVGQLSQSYVVTEGPDGMYLIDQHAAHERIVLERMVASLKSRETI 613 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 SQ LLTP + L E + EH E L R+G + E + +R +P +L K+ L Sbjct: 614 SQLLLTPMHLTLAPVEIEAVEEHGEQLRRIGFELEVVDGKTVEVRAVPTVLVKRLDSVSL 673 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 ++ E+ + E LA +AC +I+ + EM +L ++E+ C Sbjct: 674 HALLVELTAEDQLGHTETWEERALANVACKAAIKQNYFLAMSEMREMLEQLEQVKAPFSC 733 Query: 574 NHGRPTFIKLKLSDIEKLFGR 594 HGRPT + L+++ F R Sbjct: 734 CHGRPTMVHFSLAELAHEFER 754 >gi|160938811|ref|ZP_02086162.1| hypothetical protein CLOBOL_03705 [Clostridium bolteae ATCC BAA-613] gi|158437774|gb|EDP15534.1| hypothetical protein CLOBOL_03705 [Clostridium bolteae ATCC BAA-613] Length = 763 Score = 353 bits (905), Expect = 6e-95, Method: Composition-based stats. Identities = 123/379 (32%), Positives = 195/379 (51%), Gaps = 7/379 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + IN+IAAGE+IERP+ +KEL+EN++DA ++ V I GG S ++TDNG+G Sbjct: 4 ITVLDQSTINKIAAGEVIERPASVVKELLENAVDAHATAVTVEIKDGGCSMIRVTDNGWG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + EEIP+A RH TSKI +D I + GFRGEAL SI AV+ + L+++ + TG++ Sbjct: 64 IPKEEIPLAFLRHATSKIKTVEDLFTISSLGFRGEALASIAAVAQVELITKTGDSLTGSR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + + GT + R+LF+ PAR FLK+ E + ++ ++A+++P Sbjct: 124 YQIEGGVEKGLEEIGAPDGTTIIARNLFYNTPARKKFLKTPMTEGAHVAALVEKIALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +S F N+ + S N N + I V G + N + + + IT+ G+TG P Sbjct: 184 DISIRFIQNNQNKL---YTSGNHNLKDLIYTVFGREIAGNLLPVEINEDWITVTGFTGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N FINGR ++ I I AY + +YP +L I+P +DVNVH Sbjct: 241 VIARSNRNYENYFINGRYIKSSIISKAIEEAYKPYMMQHKYPFTMLHFHIEPDTLDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +RF + + + +++++ A+ K + L K Q + P+ Sbjct: 301 PTKMELRFADGEKVYHAVLRAVSNALAHKELIPQVSLEAKQEKEARQ--LAEKLAPRPEP 358 Query: 361 SLTNTQEKLFLQENRLSTN 379 +E L + + Sbjct: 359 FEVRRRENLSQKTSGSPVQ 377 Score = 189 bits (480), Expect = 1e-45, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 1/185 (0%) Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q+ Y + + + L I+DQHAAHE++++E + + + Q + P I+ L E Sbjct: 578 IGQLFDTYWMVEYNEQLFIIDQHAAHEKVLYENTIKSLKTRQYDMQMVDPPIILTLNMNE 637 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 L+ ++ + +G + E FG A+R +PA L +LL ++ID + + + + Sbjct: 638 ELLLEKYMDYFTGIGFEIEPFGGREYAVRGVPANLFSIAKKELLTEMIDGLSEDMSVHN- 696 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 D I +A+M+C +++ M E N L+ ++ N C HGRPT I + ++E Sbjct: 697 PDIIYEKVASMSCKAAVKGHHTMSFQEANVLIDQLLDLENPYACPHGRPTIISMSKYELE 756 Query: 590 KLFGR 594 K F R Sbjct: 757 KKFKR 761 >gi|166031821|ref|ZP_02234650.1| hypothetical protein DORFOR_01522 [Dorea formicigenerans ATCC 27755] gi|166028274|gb|EDR47031.1| hypothetical protein DORFOR_01522 [Dorea formicigenerans ATCC 27755] Length = 698 Score = 352 bits (904), Expect = 7e-95, Method: Composition-based stats. Identities = 130/398 (32%), Positives = 206/398 (51%), Gaps = 7/398 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L + I++IAAGE+IERP+ +KEL EN++DA ++ V I GG +F +I DNG Sbjct: 3 KIQVLDQITIDKIAAGEVIERPASVVKELAENAIDAGATAVTVEIKEGGITFMRIADNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A RH TSKI +D ++I + GFRGEAL SI AVS + L+++ + + G Sbjct: 63 GIDKEDVRAAFLRHSTSKIRSAEDLAHISSLGFRGEALSSIAAVSQVELLTKTKEADFGV 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I+G K S+ GT +R LF+ PAR FLK+ E + + D++ R+A+++ Sbjct: 123 RYKIAGGKEESLEDAGAPDGTTFLIRQLFYNTPARRKFLKTAMTEASHVGDLVTRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF F + S NGN + I + G + +N +E++ + I + GY G Sbjct: 183 PEVSFRFINNGQVKLH---TSGNGNLKDVIYHIYGREIASNLIEVDFERKGIHITGYLGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +RGN N F++GR ++ I I Y + +YP VVL L++D VDVNV Sbjct: 240 PLISRGNRNFENYFVDGRYIKSSIISKAIEDGYKDFTMQHKYPFVVLYLDVDTEHVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD--NAPKTHLPK 357 HP K +RF N I N + ++ ++++ + L I +D + + Sbjct: 300 HPTKMDVRFNNQQEIYNTLFAAVDDGLHERELIPEVTLDDIKIPEEPKDCKSNFPEEPKE 359 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 L E ++ R S D+ N+ Sbjct: 360 SKMDLPKKSEAEHTEKLRTSLQSPQNEDEKLQYFMNEM 397 Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 123/265 (46%), Gaps = 4/265 (1%) Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 S K + N+ K A S +Q+ + Q ++++ + + Sbjct: 432 PVPYSYKPQKNIPAPNSYKPQRNVQAQSSYKSQQNVQTQGSQIAEMPNYTARQVPAEKPQ 491 Query: 394 --DPVEES--EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + EE E Q+ Y + + D L I+DQHAAHER+++E+ + + Sbjct: 492 QLNFFEEKLLEPQAKAEHKIIGQVFDTYWLVEFHDNLYIIDQHAAHERVLYEQTLKGMKT 551 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 + TSQ + P I++L E L+ + + R+G + E FG ++ A+R +P L Sbjct: 552 REFTSQLISPPIILNLSMQEAELLRLYMDQFTRIGFEIEEFGQDSYAVRAVPDNLFSIAK 611 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +LL ++ID + D + I+ +A+M+C +++ ++ + E++ L+ E+ N Sbjct: 612 KELLMEMIDSLSDEINRNAPSNLIDEKIASMSCKAAVKGNMRLSAAEVDTLITELLSLDN 671 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT I + ++EK F R Sbjct: 672 PYHCPHGRPTIIAMSRRELEKKFKR 696 >gi|170288719|ref|YP_001738957.1| DNA mismatch repair protein MutL [Thermotoga sp. RQ2] gi|170176222|gb|ACB09274.1| DNA mismatch repair protein MutL [Thermotoga sp. RQ2] Length = 516 Score = 352 bits (904), Expect = 8e-95, Method: Composition-based stats. Identities = 154/595 (25%), Positives = 273/595 (45%), Gaps = 88/595 (14%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++L E ++ +IAAGE+I PS +KEL+ENSLDA++ R+ I GGK+ +++DNG Sbjct: 8 RIKRLPESLVRKIAAGEVIHNPSFVLKELVENSLDAQADRIVVEIENGGKNMVRVSDNGI 67 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT EE +A++ + TSKI +D I T+GFRGEAL SI VS ++++ ++ Sbjct: 68 GMTREEALLAIEPYTTSKIESEEDLHRIRTYGFRGEALASIVQVSRTKIVTKTEKDALAT 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ I+G K+ + + GT VEVRDLFF +P R LKS +E + ++ R + Sbjct: 128 QLMIAGGKVEEISETHRDTGTTVEVRDLFFNLPVRRKSLKSSAIELRMCREMFERFVLVR 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V F F++ ++ N ER + +I ED + E+ + + ++G Sbjct: 188 NDVDFVFTSDGKI---VHSFPRTQNIFER-AILILEDLRKGYITFEEELSGLRIKGIVSS 243 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + Y ++NGR V + + + Y +P YPV VL +E++P ++DVN+ Sbjct: 244 REVTRSSRTGEYFYVNGRFVVSEELHEVLMKVYD--LPKRSYPVAVLFIEVNPEELDVNI 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP+K ++F N ++ + +++++ + +K + Sbjct: 302 HPSKIVVKFLNEEKVKKSLEETLKRNLARKWYRS-------------------------- 335 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + +S++ L ++ P+Y + Y + Sbjct: 336 -----------VAYEEISSHALSVAESPSYRW-------------------FLVKGKYAV 365 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + DGL+ VD HA HER I+E++ + K + +T L E + Sbjct: 366 VEVEDGLLFVDLHALHERTIYEEILSKKSWRKRRVKRNIT----------VVLSREEKQK 415 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L G + A+ + EIP L++ + + RD + ++++ +A Sbjct: 416 LEEYGFSFQGE-EGALKVIEIPEFLTEDVVEEFFRDF-----------PVDEKLKERIAL 463 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC + +SG E+ L ++ +C HGRP K+ D+++ F R Sbjct: 464 AACKLATKSGEF--DEEIASKLLDVFFKKRFERCPHGRPISFKISYEDMDRFFER 516 >gi|240146293|ref|ZP_04744894.1| DNA mismatch repair protein MutL [Roseburia intestinalis L1-82] gi|257201597|gb|EEU99881.1| DNA mismatch repair protein MutL [Roseburia intestinalis L1-82] Length = 686 Score = 352 bits (904), Expect = 9e-95, Method: Composition-based stats. Identities = 129/362 (35%), Positives = 194/362 (53%), Gaps = 6/362 (1%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I LS++ I++IAAGE++ERPS +KEL+EN++DA+++ V I GG SF +ITDN Sbjct: 1 MPEITLLSQETIDKIAAGEVVERPSSVVKELVENAIDAKATAVTVEIKEGGISFIRITDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++P+A RH TSKI +D +I + GFRGEAL SI AVS + L+++ T Sbjct: 61 GCGIERAQVPLAFLRHSTSKIKSVEDLMSITSLGFRGEALSSIAAVSQVELITKTYGELT 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G K + GT VR+LF+ PAR FLK+ Q E N I D++ R+A+ Sbjct: 121 GTRYVIEGSKEKENEEIGAPEGTTFIVRNLFYNTPARRKFLKTAQTEGNYINDLMERLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P VSF F + S N + I + G D + +E++ K+ ++G+ Sbjct: 181 SHPGVSFKFINNGQTKMH---TSGNSREKDMIYHIYGRDITSGLLEIDHKNEYFHVKGFI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P +RGN N FINGR ++ + +I AY + +YP VL +D +DV Sbjct: 238 GKPLISRGNRNFENYFINGRYIKSALLSKSIEEAYKGFLMQHQYPFCVLYFSMDTDLLDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RF N I + + I+ A+ K + ++ I AP + Sbjct: 298 NVHPTKMELRFSNNEAIYKTLFEIIRGALTHKDFIPEVPVQEEKIRKRENIKAPLPEPFE 357 Query: 358 YA 359 Sbjct: 358 RR 359 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 76/451 (16%), Positives = 156/451 (34%), Gaps = 25/451 (5%) Query: 156 NFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGE 215 ++ + I + +I F + + + S + + + Sbjct: 247 RNFENYFINGRYIKSALLSKSIEEAYKGFLMQH--QYPFCVLYFSMDTDLLDVNVHPTKM 304 Query: 216 DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + + E K+ ++G F Q ++ R Sbjct: 305 ELRFSNNEAIYKTLFEIIRGALTHKDFIPEVPVQEEKIRKRENIKAPLPEPFERRGVEMV 364 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS 335 GR+ P+ + + + ++ I A K+ + Sbjct: 365 RSGGRF---------QPQDIQQGTGGQSGFAASKENEDVQTTI-PMQSAAPQKESAPPEN 414 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 + + + + + + S T T K Q + ++ + Sbjct: 415 LSVFNSLLPKKETAVTEQSADRVSESNTYTVSKPVPQPIQAGKTTASLPEETAAALPESK 474 Query: 396 VEESEA------------THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 V + + Q+ Y + + D L I+DQHAAHE++++EK Sbjct: 475 VTYEQQELAAVSEGFLTKDAKKKHKIIGQLFDTYWMVEYEDKLFIIDQHAAHEKVLYEKT 534 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + +SQTL P I+ L E ++ ++ E + G + E FG A+ IPA Sbjct: 535 MKKVREKTFSSQTLSPPIILTLSIEEIEMLEKYREQIDAFGYEIEPFGGKEYAVTAIPAD 594 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 + + + +++D+ + + + +E + A+M+C +I+ + + E RL+ E Sbjct: 595 FTGIDTKTMFLEMLDDFANINENDSPNAIMEKV-ASMSCKAAIKGNQHISRPEAERLIDE 653 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + N C HGRPT I + +IEK F R Sbjct: 654 LLELENPYNCPHGRPTIISMTKYEIEKKFKR 684 >gi|317056654|ref|YP_004105121.1| DNA mismatch repair protein MutL [Ruminococcus albus 7] gi|315448923|gb|ADU22487.1| DNA mismatch repair protein MutL [Ruminococcus albus 7] Length = 693 Score = 352 bits (903), Expect = 1e-94, Method: Composition-based stats. Identities = 126/401 (31%), Positives = 211/401 (52%), Gaps = 12/401 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR LS ++ IAAGE+I+RP+ IKEL+EN++DA ++ + I GG+++ ++TDNG G Sbjct: 4 IRVLSREVSELIAAGEVIDRPASVIKELLENAIDAGATVITVEIKNGGRTYMRVTDNGKG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++P+A RH TSKIS DD +I T GFRGEAL SI AV+ + +M++ +++ G Sbjct: 64 LAPDDLPIAFLRHATSKISQKDDLDSIMTLGFRGEALASICAVAKVDVMTKRREDSYGTH 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 AI G + GT VRD+F+ +PARL FLK + E N + D++ ++ +++P Sbjct: 124 YAIEGAEEKISEQCGCPDGTTFIVRDIFYNVPARLKFLKKDSSEANHVADLVTKLTLSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF N + +G + V G +F N+ +E++ I + GYT P Sbjct: 184 DISFKLIRDNKNE---IITAGDGKIYSSVYSVYGREFANSLIEVDHTWQGIHVYGYTVKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + N F+N R V+ K + I AY I +G++P VL +++ P +DVNVH Sbjct: 241 LSAKPNRKFQNFFVNSRFVRSKACAAAIEEAYRNNIMVGKFPACVLYIDVPPNTIDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +RF + +I + +++ A+ +K VL+ + H+ L + Sbjct: 301 PTKIEVRFSDEKLIHEAVFFAVKNALMEKDEPGELVLNDSRNFTDHE-------LFDFPP 353 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA 401 + Q + ++E L D + + +N V +E Sbjct: 354 EDKSVQLEFSVEEETLPEADKILNQMSAVESENRSVNATEP 394 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 127/311 (40%), Gaps = 15/311 (4%) Query: 296 DVNVHPAKSYIRFRNPTIIRN---------FIIQSIQKAINKKGISTSSVLSKKMISSFH 346 N + + + I + I++ + L ++ Sbjct: 384 SENRSVNATEPVVDDERPLPEPPEKRPFEPKITKVENIPIDEDKRKSGEDLFLAELAEPS 443 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQE--NRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 PK + +++ L E +D + + E + Sbjct: 444 PVPVPKIQEKITVEEINKVLQEIPLPEVPAEEEKDDDFHYINDRSFIRSVVREVKKEPEK 503 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 I ++ + Y+++Q D ++++D+HAAHER IFEK++ D +++ +Q LL P ++ Sbjct: 504 PKPIVVGELFRTYVVAQVGDEMLLMDKHAAHERYIFEKIKNDI--SELETQMLLEPVMVM 561 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK-KNIPQLLRDIIDEIIDS 523 L E + + + L RLG + E +A++ +P IL +N ++ ++ I Sbjct: 562 LSYDEFDALAANLDKLSRLGFEIEPDVAPTVAVKGVPIILGDSENPTDIVTELARNFIQC 621 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 L+ +++ ++AC +I++ +IE+ LL + N N C HGRP I L Sbjct: 622 RNNPQLE-VFDDLYHSIACKAAIKANDNNSTIELQALLNAVYGNENIRYCPHGRPVIITL 680 Query: 584 KLSDIEKLFGR 594 DIEK F R Sbjct: 681 SKKDIEKQFRR 691 >gi|291550403|emb|CBL26665.1| DNA mismatch repair protein MutL [Ruminococcus torques L2-14] Length = 708 Score = 352 bits (903), Expect = 1e-94, Method: Composition-based stats. Identities = 128/432 (29%), Positives = 214/432 (49%), Gaps = 11/432 (2%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I L + I++IAAGE+IERP+ +KEL+EN++DA S+ V+ I GG SF +ITDN Sbjct: 1 MPHIHVLDQITIDKIAAGEVIERPASIVKELVENAIDAGSTSVKIEIKDGGISFIRITDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +E+ A RH TSKI +D S+I + GFRGEAL SI AV+ L+++ Sbjct: 61 GCGIPQDEVQRAFLRHSTSKIETVEDLSHIASLGFRGEALSSIAAVTRTELITKTADAEF 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G K S+ GT V LF+ +PAR FLK+ E + D++ +A+ Sbjct: 121 GTRYVIEGGKEVSLEDTGAPNGTTFLVHQLFYNVPARRKFLKTPMTEAGHVQDLLMHLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P+V+F F + + S NG + I V G D N +E++ + N I + G+ Sbjct: 181 SHPEVAFQFLNNGQEKLR---TSGNGKLKDVIYNVYGRDVAANLIEIDYEKNGIHITGFL 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P RGN N F+NGR V+ I ++ AY + + ++P VL + VD+ Sbjct: 238 GKPIITRGNRNFENFFVNGRYVKSAMISKSVEDAYRDFVMQHKFPFAVLHFHLSGENVDI 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RF + N + +++ + + + + + + + S+ + + Sbjct: 298 NVHPTKMELRFSRQQEVYNTVFEAVHRTLLEPELIQKAEVPDPVESNENMAERSERVKKT 357 Query: 358 YATSLTNTQE---KLFLQENRLSTNDLLPSD--DPTYSEDNDPVEESEATHYQLGIACAQ 412 + ++ T +E FL R + ++ + D V++ + ++ Sbjct: 358 FTSASTKDKEDTGSPFLLRPRKENEKVTAAELIKESRETVKDDVQDEDYFIRKMKERVLS 417 Query: 413 IHQNYIISQTTD 424 H ++ D Sbjct: 418 YHNRSSSAEVAD 429 Score = 200 bits (508), Expect = 7e-49, Method: Composition-based stats. Identities = 71/255 (27%), Positives = 131/255 (51%), Gaps = 8/255 (3%) Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTN---DLLPSDDPTYSEDNDPVEESEATHY 404 + A KT P+ A ++ ++ + +Q ST+ D +D + E+ ++ E Sbjct: 452 EAADKTVAPETAATVQKSKPAIEMQTATTSTDAASDCEITDAKSEPENGTQMDLFEENFL 511 Query: 405 QLGIA-----CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 + I Q+ Y + + D L I+DQHAAHER+++E+ ++ S + TSQ L Sbjct: 512 KRDIRAEYKLIGQVFDTYWLVEFKDNLYIIDQHAAHERVLYERTLREMKSREFTSQYLSP 571 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P I+ L E L+ E+ + R+G + E FG A+R +P L +LL ++ID+ Sbjct: 572 PIILSLSMQEAQLLNENMDRFSRIGFEIEPFGGEEYAVRAVPDNLFSIAKKELLMEMIDD 631 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 + + +T + I+ +A+++C +++ ++ + E+++L+ E+ N C HGRPT Sbjct: 632 LTEGLSTSMTPELIDEKVASLSCKAAVKGNNRLSAQEVDKLIGELLTLDNPYHCPHGRPT 691 Query: 580 FIKLKLSDIEKLFGR 594 I + D+EK F R Sbjct: 692 IIAMTKRDLEKKFKR 706 >gi|6018218|gb|AAF01798.1|AF170912_2 MutL homolog [Caulobacter crescentus CB15] Length = 526 Score = 352 bits (903), Expect = 1e-94, Method: Composition-based stats. Identities = 185/525 (35%), Positives = 291/525 (55%), Gaps = 36/525 (6%) Query: 106 LTLMSRPPQNNTGAQIAISGEKISSVRPV--AMNPGTIVEVRDLFFTIPARLNFLKSEQV 163 L + SR I + G ++ V P G +EVRDLF+ PARL F+KSE+ Sbjct: 1 LQISSRAKGAKDAFSILVEGGQVGEVAPAAFPGPHGARIEVRDLFYATPARLKFMKSERA 60 Query: 164 ETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNF-QSTNGNFPERISQVIGEDFINNAV 222 E IT+ I+R A+A V F+ ++ R++ V+G +F NA+ Sbjct: 61 EALAITEEIKRQAMANESVGFSLDIDGRRVLRLPPEHPGPQGRLARLAAVLGREFQENAL 120 Query: 223 ELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYP 282 E+++ + + L G+ G+PT+NRGNA Y+F+NGR V+D+ + +R AYA+ + R+P Sbjct: 121 EIDQTRDGVRLSGFAGLPTYNRGNAAHQYLFVNGRPVRDRLLQGALRAAYADFLARDRHP 180 Query: 283 VVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI 342 L + ++ +VDVNVHPAK+ +RFR+P ++R I+ +++ A+ G S+ ++ + + Sbjct: 181 TAALYVTLETTEVDVNVHPAKAEVRFRDPALVRGLIVGALRHALAGAGHRASTTVAAQAL 240 Query: 343 SSFHQDNAPKT-HLPKYATSLTNTQEKLFLQENRLSTNDLLPS----------------- 384 S +P + P+Y + + + Sbjct: 241 DSIRAQQSPFPGYQPQYQPGPSPAGFSAWREGGWTPPTQRPMDLPGLNEVSARVEPSYGG 300 Query: 385 ---------------DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 +D ++ + Y LG A AQ+H+ YI++QT DG+VIV Sbjct: 301 DLAGVVREAYAAAAFEDRPPTDYPGATAPFDPVDYPLGAARAQVHETYIVAQTRDGMVIV 360 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQHAAHERL++E+M+ + S +T QTLL PE++DL E ++ E+L LG+ E Sbjct: 361 DQHAAHERLVYERMKGEMASGGVTRQTLLLPEVVDLDPAEAERVVARAEELAGLGLVLES 420 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 FGP A+ +RE PA+L K + L+RDI D++ ++ L++R+E + +TMAC+GS+R+G Sbjct: 421 FGPGAVLVRETPALLGKTDAAALVRDIADDLAENGQALALKERLEEVCSTMACHGSVRAG 480 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R++ EMN LLREME P+S QCNHGRPT+++LKL+DIEKLFGR Sbjct: 481 RRLNGAEMNALLREMEATPHSGQCNHGRPTYVELKLADIEKLFGR 525 >gi|291536170|emb|CBL09282.1| DNA mismatch repair protein MutL [Roseburia intestinalis M50/1] gi|291538967|emb|CBL12078.1| DNA mismatch repair protein MutL [Roseburia intestinalis XB6B4] Length = 686 Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats. Identities = 129/362 (35%), Positives = 194/362 (53%), Gaps = 6/362 (1%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I LS++ I++IAAGE++ERPS +KEL+EN++DA+++ V I GG SF +ITDN Sbjct: 1 MPEITLLSQETIDKIAAGEVVERPSSVVKELVENAIDAKATAVTVEIKEGGISFIRITDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++P+A RH TSKI +D +I + GFRGEAL SI AVS + L+++ T Sbjct: 61 GCGIERAQVPLAFLRHSTSKIKSVEDLMSITSLGFRGEALSSIAAVSQVELITKTYGELT 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G K + GT VR+LF+ PAR FLK+ Q E N I D++ R+A+ Sbjct: 121 GTRYVIEGSKEKENEEIGAPEGTTFIVRNLFYNTPARRKFLKTAQTEGNYINDLMERLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P VSF F + S N + I + G D + +E++ K+ ++G+ Sbjct: 181 SHPGVSFKFINNGQTKMH---TSGNSREKDMIYHIYGRDITSGLLEIDHKNEYFHVKGFI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P +RGN N FINGR ++ + +I AY + +YP VL +D +DV Sbjct: 238 GKPLISRGNRNFENYFINGRYIKSALLSKSIEEAYKGFLMQHQYPFCVLYFSMDTDLLDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RF N I + + I+ A+ K + ++ I AP + Sbjct: 298 NVHPTKMELRFSNNEAIYKTLFEIIRGALTHKDFIPEVPVQEEKIRKRENIKAPLPEPFE 357 Query: 358 YA 359 Sbjct: 358 RR 359 Score = 199 bits (507), Expect = 7e-49, Method: Composition-based stats. Identities = 76/451 (16%), Positives = 156/451 (34%), Gaps = 25/451 (5%) Query: 156 NFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGE 215 ++ + I + +I F + + + S + + + Sbjct: 247 RNFENYFINGRYIKSALLSKSIEEAYKGFLMQH--QYPFCVLYFSMDTDLLDVNVHPTKM 304 Query: 216 DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + + E K+ ++G F Q ++ R Sbjct: 305 ELRFSNNEAIYKTLFEIIRGALTHKDFIPEVPVQEEKIRKRENIKAPLPEPFERRGVEMV 364 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS 335 GR+ P+ + + + ++ I A K+ + Sbjct: 365 RSGGRF---------QPQDIQQGTDGQSGFAASKENEDVQTTI-PMQSAAPQKESAPPEN 414 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 + + + + + + S T T K Q + ++ + Sbjct: 415 LSVFNSLLPKKETAVTEQSADRVSESNTYTVSKPVPQPIQADKTTASLPEETAAALPESK 474 Query: 396 VEESEA------------THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 V + + Q+ Y + + D L I+DQHAAHE++++EK Sbjct: 475 VTYEQQELAAVSEGFLTKDAKKKHKIIGQLFDTYWMVEYEDKLFIIDQHAAHEKVLYEKT 534 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + +SQTL P I+ L E ++ ++ E + G + E FG A+ IPA Sbjct: 535 MKKVREKTFSSQTLSPPIILTLSIEEIEMLEKYREQIDAFGYEIEPFGGKEYAVTAIPAD 594 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 + + + +++D+ + + + +E + A+M+C +I+ + + E RL+ E Sbjct: 595 FTGIDTKTMFLEMLDDFANINENDSPNAIMEKV-ASMSCKAAIKGNQHISRPEAERLIDE 653 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + N C HGRPT I + +IEK F R Sbjct: 654 LLELENPYNCPHGRPTIISMTKYEIEKKFKR 684 >gi|168699267|ref|ZP_02731544.1| DNA mismatch repair protein [Gemmata obscuriglobus UQM 2246] Length = 731 Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats. Identities = 117/364 (32%), Positives = 201/364 (55%), Gaps = 6/364 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L ++N+IAAGE+IERP+ +KEL+ENS+DA ++R++ + GG ++ D+G Sbjct: 3 RIRQLPPDVVNKIAAGEVIERPASVVKELLENSIDAGATRIDIDLDAGGTELIRVVDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A +H TSK+ +DD I T GFRGEAL SI V +TL SR +G Sbjct: 63 GIDPDDLALAFSQHATSKLTTADDLFQIRTMGFRGEALASISGVGQITLQSRTHTAASGC 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G IS RP PGT +EVR LF+ +P R FLKS E + + + R+A+A+ Sbjct: 123 EVKCDGNGISDPRPWNGAPGTRMEVRHLFYNVPVRKKFLKSVATELGHVCETVTRLALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + T Y + + +RI+ + + E++ + L+GY Sbjct: 183 PALHITLRHNNRLVYDI---PGSAGLLDRIALFFTGEVRDALYEIDSGDGPMRLRGYIAD 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +RGN+ Y+F+NGR +D+ + ++ +Y + GRY + L L + P ++DVNV Sbjct: 240 PKCDRGNSKLQYLFVNGRWFRDRSLSHALQESYRGLLMAGRYTIGFLFLTLPPDKLDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM-ISSFHQDNAPKTHLPKY 358 HP KS +RF+ +++ + + +I++ + K+ + + + + + ++ PK P Sbjct: 300 HPTKSEVRFQENSLVYSLVRATIKQRLLKENLIPHLTVPQGIEDGALAEEPEPKIETPSL 359 Query: 359 ATSL 362 TS Sbjct: 360 FTSP 363 Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 127/259 (49%), Gaps = 3/259 (1%) Query: 339 KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQEN---RLSTNDLLPSDDPTYSEDNDP 395 + + D AP + A+ + F+ ++S + S Sbjct: 472 DRSEEEENTDIAPSEFDAQIASEAPPAPARQFVSAPPMEQISPGEPQESTPAPAPPAPAS 531 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 A + Q+H +Y++ +T DG++++DQHA HER++FE++R+ + ++ Q Sbjct: 532 TAPPVAGAPAGSSSAIQLHDSYLVLETPDGMLVIDQHALHERILFEQLRRRIRAGQLEVQ 591 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL PE +DL + AL++E + L LG+ FG N I + P +L +K +LR Sbjct: 592 RLLIPEPVDLPAEQAALVLECADALAELGLDVSDFGGNTILLSSYPTLLGRKPPHVILRG 651 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 +ID I+ T + + ++ATMAC ++++G K+ E+ LLR E +S C H Sbjct: 652 VIDHIVTQERAPTKEALLHLLMATMACKAAVKAGDKLSPEEITYLLRLREMAEDSHHCPH 711 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRPT + ++++K F R Sbjct: 712 GRPTSLLFSRAELDKQFRR 730 >gi|312795202|ref|YP_004028124.1| DNA mismatch repair protein mutL [Burkholderia rhizoxinica HKI 454] gi|312166977|emb|CBW73980.1| DNA mismatch repair protein mutL [Burkholderia rhizoxinica HKI 454] Length = 844 Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats. Identities = 132/361 (36%), Positives = 203/361 (56%), Gaps = 13/361 (3%) Query: 1 MK---IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQIT 57 M I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA ++ + + GG I Sbjct: 136 MPTRAIQPLPDQLISQIAAGEVVERPASVVKELVENALDAGATALRITLDAGGVKRIMIA 195 Query: 58 DNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN 115 D+G G+ ++E+P+A+ RH TSKI + ++ T GFRGEAL SI AV+ ++ SR Sbjct: 196 DDGCGIEADELPLALMRHATSKIRSLAELESVCTLGFRGEALASIAAVAQTSITSRTADA 255 Query: 116 NTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 +I + ++ P A GT +EVRDL+F+ PAR FLKSEQ E +VIRR Sbjct: 256 PHATRI---DAQTGALSPAAGGVGTTIEVRDLYFSTPARRKFLKSEQTEFGHCLEVIRRA 312 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A++ P V+F+ N S + + GE F + + L E + I + G Sbjct: 313 ALSRPDVAFSVLHNGRAVEHWNAASAAARTAKIL----GEAFATSHLPLEEAAGPIAIYG 368 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 + G+PT +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P V Sbjct: 369 FAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPAYVLFLDLPPEGV 428 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHP+K +RFR+ I F+ ++Q+A+ + S + +++ P T Sbjct: 429 DVNVHPSKIEVRFRDSRSIHQFVFHAVQRALARHA-GASPDTTAAGHAAYLTPTVPDTAS 487 Query: 356 P 356 P Sbjct: 488 P 488 Score = 215 bits (548), Expect = 2e-53, Method: Composition-based stats. Identities = 72/271 (26%), Positives = 126/271 (46%) Query: 324 KAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 A+ ++++ ++ + + S T+ T+ Sbjct: 572 PALPTHDDASAAPSPASGPAADQASSPMDAESTQSGPSATSEAHPASATNEAQPTSATHA 631 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + + + LG A Q+H Y+++Q T GLV+VD HAAHER+++E+ Sbjct: 632 VQPASAANGPAAASAQPLDEHPLGFALGQLHGIYVLAQNTRGLVLVDMHAAHERILYEQF 691 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + I Q LL P + E + E E L LG P +AIR +PA+ Sbjct: 692 KHALAQRHIAVQPLLIPVTMQADAVEIGVAGEERETLDALGFDIASLSPTTLAIRAVPAL 751 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 L ++ L R ++ ++ + L + +L T+AC+ ++R+ R++ EMN LLR+ Sbjct: 752 LKDADLVSLARAVLADLHAYGGSRVLTEHQHELLGTLACHHAVRANRRLSIDEMNALLRQ 811 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ME + QCNHGRPT+ +L L+++++LF R Sbjct: 812 MEATERADQCNHGRPTWFQLTLNELDRLFMR 842 >gi|253577128|ref|ZP_04854449.1| DNA mismatch repair protein MutL [Paenibacillus sp. oral taxon 786 str. D14] gi|251843510|gb|EES71537.1| DNA mismatch repair protein MutL [Paenibacillus sp. oral taxon 786 str. D14] Length = 401 Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats. Identities = 118/337 (35%), Positives = 190/337 (56%), Gaps = 5/337 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L E I NQIAAGE++ERP+ +KEL+EN++DA ++++E + GG ++TDNG Sbjct: 42 KIAILDEHIANQIAAGEVVERPASVVKELVENAIDAGATKIEVAVEEGGMQLIRVTDNGS 101 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ A RH TSKI+ D I + GFRGEALPSI AV+ + L+S + G Sbjct: 102 GIEPEDCETAFYRHATSKITSGRDLFQIRSLGFRGEALPSIAAVAKVRLVSSSNDSGLGR 161 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I I G + +A GT + V++LF+ PARL ++K+ Q E I+D + R A+A+ Sbjct: 162 VIEIEGGSLKLNEDIAAPQGTDIVVKELFYNTPARLKYMKTIQTELGHISDTMYRQALAH 221 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++FT + + G+ + I+ V G + V + + + + GY G Sbjct: 222 PEIAFTLRHNGN---TLLQSPGGGDLLQVIAAVYGVNASKGMVPIEAEDLDYRVTGYIGR 278 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + + +NGR ++++ + I AY +P+ RYP+VVL+LE+ P VDVNV Sbjct: 279 PDLARSSRSGMSTIVNGRYIRNQGLHQAILRAYHTLLPINRYPLVVLMLEMHPSLVDVNV 338 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 HP+K +RF + +F+ S++ ++ + + V Sbjct: 339 HPSKLEVRFSKEPELNSFVENSVRAVLSGQVLIPQVV 375 >gi|331084835|ref|ZP_08333923.1| hypothetical protein HMPREF0987_00226 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410929|gb|EGG90351.1| hypothetical protein HMPREF0987_00226 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 691 Score = 351 bits (901), Expect = 2e-94, Method: Composition-based stats. Identities = 140/414 (33%), Positives = 213/414 (51%), Gaps = 9/414 (2%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I+ L + I++IAAGE+IERP+ +KEL+EN++DA+++ + I GG S +I DN Sbjct: 1 MPNIQVLDQVTIDKIAAGEVIERPASIVKELVENAIDAKATAITVEIKDGGISLIRIADN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ EE+P+A RH TSKI +D + I + GFRGEAL SI A++ + L ++ + + Sbjct: 61 GCGIPKEEVPLAFLRHSTSKIRSVEDLTGIASLGFRGEALSSIAAIAQVELRTKVKEADA 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G Q I G S+ + M GT VR +FF PAR FLK+ E + ++++I R+A+ Sbjct: 121 GIQYRIEGGSEKSLEEIGMPDGTAFFVRQIFFNTPARRKFLKTPMTEASHVSELITRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P++SF F T + S NG + I + G D N +E+N K+N + ++GY Sbjct: 181 SHPEISFQFLTNGQPKLH---TSGNGRLKDVIYHIYGRDITGNLLEINAKANGVAIRGYI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P +RGN N +INGR V+ I I AY +YP VL ID +DV Sbjct: 238 GKPLISRGNRNYENYYINGRYVKSSIIAKAIEDAYKGFTMQHKYPFTVLHFTIDGTDLDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RF + NFI +++ A+++K + LS S K P Sbjct: 298 NVHPTKMEVRFSKQQEVYNFIYNTLKDALSEKELIPRVELSVAEPVSQKSTFLEKAVSPS 357 Query: 358 YATSLTNTQ-EKLFLQ--ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 L + + EK+F++ + + E A H Q Sbjct: 358 VPDVLPDKKNEKVFVEKLPQEARYAEAPSEEKNLDYFMKKMRERVTAYHNQSSQ 411 Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 127/273 (46%), Gaps = 4/273 (1%) Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 + ++ I ++ + F Q + + + N QE + RL T Sbjct: 421 YRNQLSTDRIKEAAAYRAEQKKQFGQSEKVQEKIYRKEDKRENLQETP-QEIARLQTPKE 479 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 D D + + Y Q+ + Y I + D + I+DQHAAHER+++E Sbjct: 480 AEEDTQLNFFDQKLLSKEAKQEY---TLVGQVFETYWIVEYRDQMYIIDQHAAHERVLYE 536 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 + + + TSQ + P +++L E L+ EH E+ ++G + E FG ++ A+R +P Sbjct: 537 RTLKRMKEKQFTSQRISPPIVLNLSMQEEQLLSEHMENFTKIGFEIEPFGGDSYAVRAVP 596 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 L LL +++D + DS +T D + +A+M+C +++ ++ E++ L+ Sbjct: 597 DNLFSIAKKDLLIEMLDSLSDSISTNLAPDIVLEKIASMSCKAAVKGNSRLSGREVDALI 656 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 E+ + N C HGRPT I + ++EK F R Sbjct: 657 GELLELDNPYHCPHGRPTIIAMTKRELEKKFKR 689 >gi|239623995|ref|ZP_04667026.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522026|gb|EEQ61892.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 786 Score = 351 bits (901), Expect = 2e-94, Method: Composition-based stats. Identities = 112/340 (32%), Positives = 183/340 (53%), Gaps = 5/340 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + IN+IAAGE+IERP+ +KEL+EN++DA+++ V I GG S ++TDNG G Sbjct: 4 ITVLDQNTINKIAAGEVIERPASVVKELLENAIDAQATAVTIEIKDGGCSMIRVTDNGSG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++I +A RH TSKI +D + + GFRGEAL SI AV+ + L+++ + TG + Sbjct: 64 IAKDQIALAFLRHATSKIKSVEDLFTVSSLGFRGEALASIAAVAQVELITKTSDSLTGTR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + + GT + R+LF+ PAR FLK+ E + ++ ++A+++P Sbjct: 124 YQIEGGMEKGLEEIGAPEGTTIIARNLFYNTPARKKFLKTPMTEGAHVAALVEKIALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +S F N+ + S N N + I V G + N + ++ + + + G+ G P Sbjct: 184 DISIRFIQNNQNKL---YTSGNHNLKDLIYTVFGREIAANLLSVDFEQPGMQVTGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N FINGR ++ I I AY + +YP +L I P +DVNVH Sbjct: 241 VIARSNRNYENYFINGRYIRSNIISKAIEEAYKPFMMQHKYPFTMLHFTIQPDTLDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK 340 P K +RF + + +++++ A+ K + L++K Sbjct: 301 PTKMELRFSDGESVYKSVVKAVGDALAHKELIPEVSLTEK 340 Score = 191 bits (485), Expect = 3e-46, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 1/185 (0%) Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q+ Y + + + L I+DQHAAHE++++EK + + + +Q + P I+ L E Sbjct: 601 IGQLFDTYWMVEYNEQLFIIDQHAAHEKVLYEKTIKTLKTRQYDTQMVEPPIILTLNMNE 660 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 L+ ++ E +G + E FG A+R +PA L LL +++D + D + + Sbjct: 661 ELLLNKYMEYFTGMGFEIEPFGGREYAVRGVPANLFSIAKKDLLIEMLDGLSDDMSVHN- 719 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 D I +A+M+C +++ M E N L+ ++ N C HGRPT I + ++E Sbjct: 720 PDIIYEKVASMSCKAAVKGHHSMSFSEANELIDQLLGLDNPYACPHGRPTIISMSKYELE 779 Query: 590 KLFGR 594 K F R Sbjct: 780 KKFKR 784 >gi|281417498|ref|ZP_06248518.1| DNA mismatch repair protein MutL [Clostridium thermocellum JW20] gi|281408900|gb|EFB39158.1| DNA mismatch repair protein MutL [Clostridium thermocellum JW20] Length = 761 Score = 351 bits (901), Expect = 2e-94, Method: Composition-based stats. Identities = 119/356 (33%), Positives = 184/356 (51%), Gaps = 5/356 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E NQIAAGE++ERP+ +KEL+ENS+DA S+ + I GG SF ++ DNG Sbjct: 3 RIIILDENTANQIAAGEVVERPASVVKELVENSIDAGSTNISVEINNGGISFIKVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A +RH TSKI D I + GFRGEAL SI +VS + + SRP G Sbjct: 63 GIEEDDIEIAFERHATSKIRRASDLEAITSLGFRGEALASIASVSTVEVTSRPAHREYGR 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G + V GT VRDLF+ PAR FLK + E ++D++ R+A+ Sbjct: 123 YVKIQGGTVLESGQVGCPAGTTFIVRDLFYNTPARFKFLKKDSTEAGYVSDIVSRIALGN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF K+ + N + I + G++ +E++ + + + GY G Sbjct: 183 PDISFRLINNKN---TVIHTPGNNDLLSTIYSLYGKETAKECMEISYEDETVKITGYAGS 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N +++N R +++K I S I AY + ++ +VL +E++P VDVNV Sbjct: 240 PEIARANRNYQSIYLNKRYIKNKVISSAIDEAYKTYLMKNKFAFIVLYIELNPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 HP K +RF I + ++ A+ K + L + F + + K Sbjct: 300 HPTKMEVRFSREQEIFRAVYHAVNNALLSKTHIRNVSLKDSPKNYFKFEQSSKKEA 355 Score = 184 bits (466), Expect = 4e-44, Method: Composition-based stats. Identities = 74/286 (25%), Positives = 134/286 (46%), Gaps = 4/286 (1%) Query: 312 TIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ---DNAPKTHLPKYATSLTNTQEK 368 +I I + AIN+ T+ L +K + + + Y L + +K Sbjct: 475 NLINGQISGLVNWAINEPINKTNDKLIEKSDGTALKGTGEECYNFDKSGYDNILKDVSDK 534 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 N + N + +D P ++ E + Q+ YI+ Q D L+I Sbjct: 535 PKDNRNDVDNNADTNFEKIRDGKDTRPQQDIERNVFLDARIIGQVFSTYILLQNEDDLII 594 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 +DQHAAHER+ FE++++ + + +Q LLTP +I+L E + E E ++LG E Sbjct: 595 IDQHAAHERIRFEELKEKYARNESLAQYLLTPVVIELTNQEIVFLEEEKELFNKLGFIFE 654 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 FG N+I +R +P + + +++D ++ Y + E+ L +AC ++++ Sbjct: 655 SFGNNSIILRSVPIPDEGVGVKEAFLEVVDFLMSKGRKYD-KIIEEDALYQIACKSAVKA 713 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +K+ IE+ +L ++ N C HGRPT +K+ + EK+F R Sbjct: 714 NKKLDEIEIKAILDKLNMLQNPYTCPHGRPTVVKITKYEFEKMFKR 759 >gi|125973294|ref|YP_001037204.1| DNA mismatch repair protein MutL [Clostridium thermocellum ATCC 27405] gi|125713519|gb|ABN52011.1| DNA mismatch repair protein MutL [Clostridium thermocellum ATCC 27405] Length = 755 Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats. Identities = 119/356 (33%), Positives = 184/356 (51%), Gaps = 5/356 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E NQIAAGE++ERP+ +KEL+ENS+DA S+ + I GG SF ++ DNG Sbjct: 3 RIIILDENTANQIAAGEVVERPASVVKELVENSIDAGSTNISVEINNGGISFIKVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A +RH TSKI D I + GFRGEAL SI +VS + + SRP G Sbjct: 63 GIEEDDIEIAFERHATSKIRRASDLEAITSLGFRGEALASIASVSTVEVTSRPAHREYGR 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G + V GT VRDLF+ PAR FLK + E ++D++ R+A+ Sbjct: 123 YVKIQGGTVLESGQVGCPAGTTFIVRDLFYNTPARFKFLKKDSTEAGYVSDIVSRIALGN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF K+ + N + I + G++ +E++ + + + GY G Sbjct: 183 PDISFRLINNKN---TVIHTPGNNDLLSTIYSLYGKETAKECMEISYEDETVKITGYAGS 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N +++N R +++K I S I AY + ++ +VL +E++P VDVNV Sbjct: 240 PEIARANRNYQSIYLNKRYIKNKVISSAIDEAYKTYLMKNKFAFIVLYIELNPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 HP K +RF I + ++ A+ K + L + F + + K Sbjct: 300 HPTKMEVRFSREQEIFRAVYHAVNNALLSKTHIRNVSLKDSPKNYFKFEQSSKKEA 355 Score = 184 bits (466), Expect = 4e-44, Method: Composition-based stats. Identities = 74/286 (25%), Positives = 134/286 (46%), Gaps = 4/286 (1%) Query: 312 TIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ---DNAPKTHLPKYATSLTNTQEK 368 +I I + AIN+ T+ L +K + + + Y L + +K Sbjct: 469 NLINGQISGLVNWAINEPINKTNDKLIEKSDGTALKGTGEECYNFDKSGYDNILKDVSDK 528 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 N + N + +D P ++ E + Q+ YI+ Q D L+I Sbjct: 529 PKDNRNDVDNNADTNFEKIRDGKDTRPQQDIERNVFLDARIIGQVFSTYILLQNEDDLII 588 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 +DQHAAHER+ FE++++ + + +Q LLTP +I+L E + E E ++LG E Sbjct: 589 IDQHAAHERIRFEELKEKYARNESLAQYLLTPVVIELTNQEIVFLEEEKELFNKLGFIFE 648 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 FG N+I +R +P + + +++D ++ Y + E+ L +AC ++++ Sbjct: 649 SFGNNSIILRSVPIPDEGVGVKEAFLEVVDFLMSKGRKYD-KIIEEDALYQIACKSAVKA 707 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +K+ IE+ +L ++ N C HGRPT +K+ + EK+F R Sbjct: 708 NKKLDEIEIKAILDKLNMLQNPYTCPHGRPTVVKITKYEFEKMFKR 753 >gi|256003774|ref|ZP_05428762.1| DNA mismatch repair protein MutL [Clostridium thermocellum DSM 2360] gi|255992335|gb|EEU02429.1| DNA mismatch repair protein MutL [Clostridium thermocellum DSM 2360] gi|316940474|gb|ADU74508.1| DNA mismatch repair protein MutL [Clostridium thermocellum DSM 1313] Length = 755 Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats. Identities = 119/356 (33%), Positives = 184/356 (51%), Gaps = 5/356 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E NQIAAGE++ERP+ +KEL+ENS+DA S+ + I GG SF ++ DNG Sbjct: 3 RIIILDENTANQIAAGEVVERPASVVKELVENSIDAGSTNISVEINNGGISFIKVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A +RH TSKI D I + GFRGEAL SI +VS + + SRP G Sbjct: 63 GIEEDDIEIAFERHATSKIRRASDLEAITSLGFRGEALASIASVSTVEVTSRPAHREYGR 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G + V GT VRDLF+ PAR FLK + E ++D++ R+A+ Sbjct: 123 YVKIQGGTVLESGQVGCPAGTTFIVRDLFYNTPARFKFLKKDSTEAGYVSDIVSRIALGN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF K+ + N + I + G++ +E++ + + + GY G Sbjct: 183 PDISFRLINNKN---TVIHTPGNNDLLSTIYSLYGKETAKECMEISYEDETVKITGYAGS 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N +++N R +++K I S I AY + ++ +VL +E++P VDVNV Sbjct: 240 PEIARANRNYQSIYLNKRYIKNKVISSAIDEAYKTYLMKNKFAFIVLYIELNPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 HP K +RF I + ++ A+ K + L + F + + K Sbjct: 300 HPTKMEVRFSREQEIFRAVYHAVNNALLSKTHIRNVSLKDSPKNYFKFEQSSKKEA 355 Score = 184 bits (466), Expect = 4e-44, Method: Composition-based stats. Identities = 74/286 (25%), Positives = 134/286 (46%), Gaps = 4/286 (1%) Query: 312 TIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ---DNAPKTHLPKYATSLTNTQEK 368 +I I + AIN+ T+ L +K + + + Y L + +K Sbjct: 469 NLINGQISGLVNWAINEPINKTNDKLIEKSDGTALKGTGEECYNFDKSGYDNILKDVSDK 528 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 N + N + +D P ++ E + Q+ YI+ Q D L+I Sbjct: 529 PKDNRNDVDNNADTNFEKIRDGKDTRPQQDIERNVFLDARIIGQVFSTYILLQNEDDLII 588 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 +DQHAAHER+ FE++++ + + +Q LLTP +I+L E + E E ++LG E Sbjct: 589 IDQHAAHERIRFEELKEKYARNESLAQYLLTPVVIELTNQEIVFLEEEKELFNKLGFIFE 648 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 FG N+I +R +P + + +++D ++ Y + E+ L +AC ++++ Sbjct: 649 SFGNNSIILRSVPIPDEGVGVKEAFLEVVDFLMSKGRKYD-KIIEEDALYQIACKSAVKA 707 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +K+ IE+ +L ++ N C HGRPT +K+ + EK+F R Sbjct: 708 NKKLDEIEIKAILDKLNMLQNPYTCPHGRPTVVKITKYEFEKMFKR 753 >gi|134294836|ref|YP_001118571.1| DNA mismatch repair protein [Burkholderia vietnamiensis G4] gi|134137993|gb|ABO53736.1| DNA mismatch repair protein MutL [Burkholderia vietnamiensis G4] Length = 681 Score = 350 bits (899), Expect = 3e-94, Method: Composition-based stats. Identities = 128/375 (34%), Positives = 206/375 (54%), Gaps = 12/375 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA + + V+ GG ITD+G G Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGARSLRIVLEEGGVKRISITDDGCG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+P+A+ RH TSKI ++ + T GFRGEAL SI +V+ L + SR + Sbjct: 83 IPPDELPLALMRHATSKIRSLEELEAVATLGFRGEALASIASVAELAITSRTADVAHATK 142 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ P A GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 143 I---DATTGALSPAAGAVGTTIEVRELYFNTPARRKFLKSEQTEFGHCIEMIRRAALARP 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N +R+++++G+ F + L+E++ + + G G+P Sbjct: 200 DVAISVLHNGKAVEHWNASEP----AQRVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 255 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 256 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 315 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---SKKMISSFHQDNAPKTHLPK 357 P+K +RFR+ I ++ ++Q+A+ + ++ + + ++ A P Sbjct: 316 PSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPDTTAGGHAAHLEATPREPASFGDTPL 375 Query: 358 YATSLTNTQEKLFLQ 372 S T F Sbjct: 376 GQRSAAGTGATGFSP 390 Score = 209 bits (533), Expect = 7e-52, Method: Composition-based stats. Identities = 69/194 (35%), Positives = 109/194 (56%) Query: 401 ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 LG A QIH Y+++Q GLVIVD HAAHER+++E+ + + Q+LL P Sbjct: 486 HDEQPLGFALGQIHGIYVLAQNAHGLVIVDMHAAHERILYEQFKNALADRTVAVQSLLLP 545 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 + E + E + L LG P +AIR +PA+L ++ L R ++ ++ Sbjct: 546 ISMTATPVEIGTVEEERDTLESLGFDLAVLSPTTLAIRAVPALLKDADLQSLARAVLADL 605 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRPT+ Sbjct: 606 HAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTW 665 Query: 581 IKLKLSDIEKLFGR 594 +L L+D+++LF R Sbjct: 666 YQLTLNDLDRLFMR 679 >gi|222099649|ref|YP_002534217.1| DNA mismatch repair protein mutL [Thermotoga neapolitana DSM 4359] gi|254766183|sp|B9K7B8|MUTL_THENN RecName: Full=DNA mismatch repair protein mutL gi|221572039|gb|ACM22851.1| DNA mismatch repair protein mutL [Thermotoga neapolitana DSM 4359] Length = 512 Score = 350 bits (899), Expect = 3e-94, Method: Composition-based stats. Identities = 146/596 (24%), Positives = 252/596 (42%), Gaps = 86/596 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+IR+L E +I +IAAGE+I PS +KEL+ENSLDA+++RV + GGK+ +++DNG Sbjct: 1 MRIRRLPESLIRKIAAGEVIHNPSFVVKELVENSLDAQANRVVVEVENGGKNLVRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GMT EE+ +A++ H TSKI +D I T+GFRGEAL SI VS ++++ ++ Sbjct: 61 TGMTKEEVLVAIEPHTTSKIESEEDLRRIRTYGFRGEALASIVQVSRTRIVTKTKEDALA 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ I+G K+ + + GT VEV+DLFF +P R LKS +E + ++ R A+ Sbjct: 121 TQVLITGGKVEEISETHRDTGTTVEVKDLFFNLPVRRKSLKSSSIELRMCREMFERFALV 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V FTF + + S I + D + E+ +++ ++G Sbjct: 181 KNNVDFTFISDGKIIHSFPATSDLFERALLILE----DLRKGYITFEEELSDLKIKGIVS 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 R N Y ++N R V + + + Y +P RYP+ VL +E Sbjct: 237 AREITRPNRTGEYFYVNERFVISEELHEVLMKVYD--LPKRRYPIAVLFIET-------- 286 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 P K I I+ F+ Sbjct: 287 -DPEKLDINIHPSKIVVRFL---------------------------------------- 305 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 +E+ + L + + + + + Y Sbjct: 306 -------EEEKVKEALEEVLTKNLARKWYRSVTYEEISSRALSVAEPSSYRWFLVKKKYA 358 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + +T D L +D HA HER+I+E++ + + +L E E Sbjct: 359 VVETEDALFFIDLHALHERVIYEEILAKRVWRSKNLKRRVIT----------SLPDEKLE 408 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L +LG +F ++ +R++P L++ + + ++II + + + +A Sbjct: 409 KLEKLGFSF-QFEGESLVVRKVPEFLTEDAVEEFFKEII---------HGSTEMLREKIA 458 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC + RSG ++L+ ++ +C HGRP ++ D+++ F R Sbjct: 459 LAACKLATRSGEF-DEKTASKLV-DLYFQKKYERCPHGRPVSFRISYEDLDRFFER 512 >gi|325263901|ref|ZP_08130634.1| DNA mismatch repair protein HexB [Clostridium sp. D5] gi|324030939|gb|EGB92221.1| DNA mismatch repair protein HexB [Clostridium sp. D5] Length = 743 Score = 350 bits (899), Expect = 3e-94, Method: Composition-based stats. Identities = 127/390 (32%), Positives = 204/390 (52%), Gaps = 6/390 (1%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I+ L + I++IAAGE+IERP+ +KEL+EN++DA ++ V I GG SF +ITDN Sbjct: 1 MPHIQVLDQITIDKIAAGEVIERPASIVKELVENAIDARATAVVVEIQEGGISFIRITDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ E++P A RH TSKI +D S+I + GFRGEAL SI AV+ + L+++ ++ Sbjct: 61 GSGIVREDVPNAFLRHSTSKIRAVEDLSHIESLGFRGEALSSIAAVTQVELITKTREDTF 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G K S+ GT +R LF+ +PAR FLK+ E I D++ R+A+ Sbjct: 121 GTRYLIEGGKEQSLEDTGAPDGTTFLIRQLFYNVPARRKFLKTPMTEAGHIQDLLMRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P+VSF F + + S NG + I + G + N ++++ + I + GY Sbjct: 181 SHPEVSFQFINNGQEKLR---TSGNGRLKDVIYSIYGREVAANLIDMDYEKGGIRITGYL 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G PT +RGN N FINGR V+ I I AY + + ++P VVL I+ +DV Sbjct: 238 GKPTISRGNRNFENFFINGRYVKSSMISKAIEDAYRDFVMQHKFPFVVLHFHINGEDIDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RF+ + N + + + + + + + + + L Sbjct: 298 NVHPTKMELRFQKQQEVYNTVYEGVHRTLLEPELIPVVDVPEPPGEKVAPPAGSPFLLKP 357 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 A + ++ + + T + P + Sbjct: 358 RAKAGAEPMKEASVPAIKNETAEEEPQEKN 387 Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats. Identities = 75/296 (25%), Positives = 131/296 (44%), Gaps = 13/296 (4%) Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 PAK+ N + + S S+ ++ +P +P Sbjct: 459 FDPAKTEEASEN-------LRNMSVPGLQNYN---SIEKENAAPSAGEENISPGLSIPSR 508 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 + EN S ++L + D ++ Y Q+ Y Sbjct: 509 LSEDKEIYGDSKNPENDASLSELAGKTEQLNLFDEKLLKREVKAEY---KLIGQVFDTYW 565 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + Q D L I+DQHAAHER+++E+ + + + TSQ L P I+ L E L+ EH + Sbjct: 566 LVQFQDSLYIIDQHAAHERVLYERTLKGMKNREFTSQYLSPPIILSLSMQETELLNEHMD 625 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 R+G + E FG + A+R IP L +LL +++D + D TT + I+ +A Sbjct: 626 RFQRIGFEIEPFGGDEYAVRAIPDNLFGIAKKELLLEMLDGLTDGITTSMTPELIDEKVA 685 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +M+C +++ ++ ++E++ L+ E+ + N C HGRPT I + ++EK F R Sbjct: 686 SMSCKAAVKGNNRLSAMEVDTLIGELLELDNPYHCPHGRPTIIAMTKRELEKKFKR 741 >gi|251796616|ref|YP_003011347.1| DNA mismatch repair protein MutL [Paenibacillus sp. JDR-2] gi|247544242|gb|ACT01261.1| DNA mismatch repair protein MutL [Paenibacillus sp. JDR-2] Length = 679 Score = 350 bits (898), Expect = 4e-94, Method: Composition-based stats. Identities = 126/392 (32%), Positives = 201/392 (51%), Gaps = 5/392 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L E++ NQIAAGE++ERP+ IKEL+EN++DA SS ++ I GG SF ++TDNG Sbjct: 3 KIQVLDEQLANQIAAGEVVERPASVIKELVENAIDAGSSVIDITIEEGGLSFIRVTDNGA 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ A QRH TSKI S D I + GFRGEALPSI AVS L +S Sbjct: 63 GIEPGDMETAFQRHATSKISSSSDLFKIASLGFRGEALPSIAAVSRLECVSSIDSTGLAQ 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G +++ P GT + VRDLF+ PARL ++K+ Q E ITD + R+A+A+ Sbjct: 123 RLFIEGGTVTASEPANSPQGTDMSVRDLFYNTPARLKYMKAIQTELGHITDYVYRIALAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++ T S + G+ + I+ V G + +++ ++++ L+GY Sbjct: 183 PGIAITLKHNGS---VLLRTLGTGDRLQVIAAVYGTNTAKAMLKVEGETSDYDLRGYISK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N V +NGR ++ + I AY +P+ R+P+VVL + + P +DVNV Sbjct: 240 PELTRANRNGMTVIVNGRYIRSHAVNQAILQAYHTLLPINRFPIVVLEIGMHPSLLDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP+K +RF +R + Q+++ A+ + + +A H P Sbjct: 300 HPSKMEVRFSKENELRTLVEQAVKGALGQVRHIPGPAEKPEREKPLFVQDAISFHRPDPL 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + + + + + + Sbjct: 360 SMPWGQERSPSNSNGSGAQDSSSHLPGGSVNP 391 Score = 198 bits (503), Expect = 3e-48, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 97/270 (35%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 + N ++ + + ++ + T+ P+ Sbjct: 407 SFNSSFPQPPKRDYVPSDATERLYKPAEQRETSVREAAAPWEQAAPALQAAEETSAPPPA 466 Query: 385 DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 D + Q+H YI++Q +GL ++DQHAAHER+ +E Sbjct: 467 PDSERPVGEASERPDGTPAFPDLYWIGQLHGTYIVAQAEEGLYLIDQHAAHERINYEYYF 526 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 + F + + SQ LL P ++ GE + G++ E FG +R P Sbjct: 527 RKFGNPQAASQQLLVPLTLEFTSGEAEQLRGMIGLFQEAGVELEPFGAQTFLVRAYPEWF 586 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 + ++ ++ + ++ + + E +C SI++ + E LL + Sbjct: 587 PQGEEQAIIEEMAELLLSERKSVNIAKLREKAAIMCSCKASIKANDRKTREEGEALLARL 646 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP + L +EK+F R Sbjct: 647 AACNQPYTCPHGRPIVVHLSTYQLEKMFKR 676 >gi|197301743|ref|ZP_03166813.1| hypothetical protein RUMLAC_00469 [Ruminococcus lactaris ATCC 29176] gi|197299183|gb|EDY33713.1| hypothetical protein RUMLAC_00469 [Ruminococcus lactaris ATCC 29176] Length = 713 Score = 350 bits (898), Expect = 4e-94, Method: Composition-based stats. Identities = 123/419 (29%), Positives = 210/419 (50%), Gaps = 19/419 (4%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I L + I++IAAGE+IERP+ +KEL+EN++DA S+ V I GG SF +I DN Sbjct: 1 MPHIHVLDQITIDKIAAGEVIERPASIVKELVENAIDAGSTSVTVEIKDGGISFIRIRDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ EE+ A RH TSKI +D S+I + GFRGEAL SI AV+ ++++ ++ Sbjct: 61 GCGIPKEEVKSAFLRHSTSKIETVEDLSHIASLGFRGEALSSIAAVTRTEVITKTKDSDL 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G K S+ GT V LF+ +PAR FLK+ E + D++ +A+ Sbjct: 121 GTKYVIEGGKEVSLEETGAPDGTTFLVHQLFYNVPARRKFLKTPMTEAGHVQDLLMHLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P+V+ F + + S NG + I Q+ G D N +EL+ + + + G+ Sbjct: 181 SHPEVALQFLNNGQEKLR---TSGNGKLKDVIYQIYGRDVAANLIELDYEKGGLRITGFL 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P RGN N F+NGR V+ I + AY + + ++P VL ++ +VD+ Sbjct: 238 GKPVITRGNRNFENFFVNGRYVKSGMISKALEDAYRDFVMQHKFPFAVLHFHLNGEEVDI 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI------------SSF 345 NVHP K +RF+ + + +++ + + + + + + + + + Sbjct: 298 NVHPTKMELRFQKQQEVYGTVFEAVHRTLLEPELIQRAEVPEPVAVRMEEEKRRSEEKAE 357 Query: 346 HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 + +P P+ + S+ + + EN + D ++ ++ + E SE Sbjct: 358 RRKESPFLLRPRASASMAG-ESRTVYGENPYTKKDAESTERTGAAQPAEHTENSEVMQP 415 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 119/240 (49%), Gaps = 2/240 (0%) Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA--CAQIH 414 + +++ + + +F Q+ ++ + + D EE+ Q+ Sbjct: 472 RSSSAEVSDKNGIFRQDEQMERISERVQEQKEKPKQMDLFEENFLKREVRAEYKLIGQVF 531 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Y + + D L I+DQHAAHER+++E+ Q + + TSQ L P I+ L E L+ Sbjct: 532 DTYWLVEFQDKLYIIDQHAAHERVLYERTLQGMKTREFTSQYLSPPIILSLSMQEAQLLN 591 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 E+ + R+G + E FG A+R +P L +LL +++D++ D +T + I+ Sbjct: 592 ENLDRFTRIGFEIEPFGGEEYAVRAVPDNLFSIAKKELLMEMLDDLADGLSTGMTPELID 651 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +A+M+C +++ ++ + E++ L+ E+ N C HGRPT I + D+EK F R Sbjct: 652 EKVASMSCKAAVKGNNRLSAQEVDELIAELLTLDNPYHCPHGRPTIIAMTKHDLEKKFKR 711 >gi|330815630|ref|YP_004359335.1| DNA mismatch repair protein MutL [Burkholderia gladioli BSR3] gi|327368023|gb|AEA59379.1| DNA mismatch repair protein MutL [Burkholderia gladioli BSR3] Length = 704 Score = 350 bits (897), Expect = 5e-94, Method: Composition-based stats. Identities = 124/360 (34%), Positives = 202/360 (56%), Gaps = 9/360 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA + + V+ GG ITD+G G Sbjct: 31 IQPLPDQLISQIAAGEVVERPASVVKELLENAIDAGAGSLRIVLEEGGVKRISITDDGCG 90 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + ++ T GFRGEAL SI +V+ +++ SR + Sbjct: 91 IPADELPLALMRHATSKIRSLHELESVATLGFRGEALASIASVAEMSITSRTEDAAHATR 150 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ P A GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 151 IDADT---GALSPAAGTRGTTIEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRAALARP 207 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+ + N R+S+++GE F + L+E++ + + G G+P Sbjct: 208 EVAISVLHNGRAVEHWNASEP----AVRVSKILGEGFATAHLPLDERAGPLAVYGCAGLP 263 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 264 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 323 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P+K +RFR+ I ++ ++Q+A+ + ++ + + + Sbjct: 324 PSKIEVRFRDSRSIHQYVFHAVQRALARHAGASPETTAGGHAAHLAPAQPGSPASFERTP 383 Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats. Identities = 73/194 (37%), Positives = 110/194 (56%) Query: 401 ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 LG A Q+H Y+++Q GLVIVD HAAHER+++E+ + + I Q+LL P Sbjct: 509 HDQQPLGFALGQVHGIYVLAQNAQGLVIVDMHAAHERILYEQFKTALANRSIAVQSLLLP 568 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 I E E E L LG P +AIR +PA+L ++P L R I+ ++ Sbjct: 569 VTITATPVEIGTADEERETLDALGFDLAMLSPTTLAIRAVPALLKDADLPTLARAILADL 628 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRPT+ Sbjct: 629 HEFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTW 688 Query: 581 IKLKLSDIEKLFGR 594 +L L D+++LF R Sbjct: 689 YQLTLGDLDRLFMR 702 >gi|284040404|ref|YP_003390334.1| DNA mismatch repair protein MutL [Spirosoma linguale DSM 74] gi|283819697|gb|ADB41535.1| DNA mismatch repair protein MutL [Spirosoma linguale DSM 74] Length = 685 Score = 350 bits (897), Expect = 5e-94, Method: Composition-based stats. Identities = 131/435 (30%), Positives = 216/435 (49%), Gaps = 16/435 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + I NQIAAGE+++RP+ +KEL+ENS+DA++ V+ ++ G++ QI D+G G Sbjct: 5 IQLLPDSIANQIAAGEVVQRPASVVKELLENSVDAKAKSVQVIVREAGRNLIQIVDDGVG 64 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 MT + M+ +RH TSKI SDD I T GFRGEAL SI AV+ + + +R + G Sbjct: 65 MTETDARMSFERHATSKIRSSDDLFRIRTMGFRGEALASIAAVAQIEMRTRRAEEELGTL 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G I + ++ PGT + +++LFF +PAR NFLKS VE I D +R+A+A P Sbjct: 125 IRIEGSDIKAQEAISCLPGTNLLIKNLFFNVPARRNFLKSNSVEMRHIIDEFQRVALANP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V+F+ Y + G RI + G+ + E++ +T+ GY G P Sbjct: 185 EVAFSLFHNDQEIYNLPA----GKLSRRIVDMFGKSYREQLNFCEEQTPYVTVHGYIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + N+ + F+N R ++ ++ + AY T+P G +P VL ++IDP +D+N+H Sbjct: 241 ESAKKARNEQFFFVNNRFIKHNYLHHAVVGAYEGTLPEGSHPFYVLFIDIDPSHIDINIH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL----------SKKMISSFHQDNA 350 P K+ I+F + + ++ +++KA+ +S S K +S+ N Sbjct: 301 PTKTEIKFDDERSVYAIMMAAVRKAVGLYNLSPSLDFDSDVNFLAGVRPKPVSTDVNVNR 360 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC 410 K ATS + + +T +E D S + Sbjct: 361 NGNADSKSATSGPGSARPISPSWASGATQQPANERTSLRNESLDKAAGSSFDIPRKADHK 420 Query: 411 AQIHQNYIISQTTDG 425 ++ + + G Sbjct: 421 PSVNNWQTLYEGVAG 435 Score = 140 bits (353), Expect = 6e-31, Method: Composition-based stats. Identities = 60/301 (19%), Positives = 122/301 (40%), Gaps = 4/301 (1%) Query: 296 DVNVHPAKSYIRFRNP--TIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 PA RN +KA +K ++ L + + + P Sbjct: 386 GATQQPANERTSLRNESLDKAAGSSFDIPRKADHKPSVNNWQTLYEGVAGNASPSPGPVA 445 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS-EDNDPVEESEATHYQLGIACAQ 412 + L + + E + ++ + + + E + Q Sbjct: 446 QPVEKGDWLGPAKPAPAITEPPTAESEPITLGSRANQLQVSLESPEQDVPVLVDDDNIVQ 505 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 I Y+++ G++++DQ AHER+++++ SQ LL P+ I L+ + L Sbjct: 506 IQNRYLLAPIKSGMLLIDQRRAHERILYDQFHASLTKRNGASQQLLFPKTITLMPVDFQL 565 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 ++ +DL LG + + G N IR +PA++ +N +L +++ ++ + L DR Sbjct: 566 ALDLRDDLTNLGFEFDELGANTFVIRGVPALIMGENEEELFANLLAQLRADTGRLKL-DR 624 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 IE++ ++A ++R ++ + E L+ ++ + N S G P + L L I LF Sbjct: 625 IESMARSLARRSAMRYVNRLSTTERKALVNQLFASANPSYTPTGEPVTVVLSLDKIAGLF 684 Query: 593 G 593 Sbjct: 685 R 685 >gi|167771418|ref|ZP_02443471.1| hypothetical protein ANACOL_02784 [Anaerotruncus colihominis DSM 17241] gi|167666058|gb|EDS10188.1| hypothetical protein ANACOL_02784 [Anaerotruncus colihominis DSM 17241] Length = 691 Score = 350 bits (897), Expect = 5e-94, Method: Composition-based stats. Identities = 117/400 (29%), Positives = 197/400 (49%), Gaps = 5/400 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L ++ IAAGE++ERP+ +KEL+EN++DA ++++ I GGG + ++TDNG Sbjct: 3 KINVLDRQVAELIAAGEVVERPASIVKELVENAVDAGATKITVEIQGGGVRYIRVTDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A RH TSK+ +D +I T GFRGEAL SI A+ + +++R G Sbjct: 63 GILREDVKNAFLRHATSKVRVQEDLGHITTMGFRGEALASIAAMCRVEMLTRTADEIAGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I+G + + GT + VRD+F+ PAR+ FLK + E N + V+ + A+A Sbjct: 123 RYTIAGGEPGELADAGCPVGTTISVRDVFYNTPARMKFLKKDLSEGNSVAAVVEKEALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF F + R + G V+G +F + ++ + + L+G Sbjct: 183 PQISFKFIRDGAVRLQ---TPGGGQLAAAARCVLGREFAEQTIPVSYELEGLALEGLISR 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+F RG+ FIN R V+ K ++ AY + +GR+P L L I P+ VDVNV Sbjct: 240 PSFARGSRTLQNFFINTRFVRSKTCMAAFEEAYRNMLMVGRFPSCALNLTIPPQTVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ +RF N + + + + A+ ++ + + F AP+ + Sbjct: 300 HPAKTEVRFANEKSVFDLVYYGCKTALGAHRLAPEIKADELRYNPFAAHTAPEAPKQQRM 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 ++ + E + + E +E Sbjct: 360 SAAQYRIQTGVPDEQPARVSAEQYREQMRALEPAAQGKEE 399 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 123/296 (41%), Gaps = 7/296 (2%) Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT-- 360 K N I + + + V + ++ + YAT Sbjct: 397 KEERCVLNAPEIAPAPQAHSPQTRIRSHRAIDIVFDEPDDDDAQSVSSANPYADSYATAR 456 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES--EATHYQLGIACAQIHQNYI 418 + L + + D + + + ++ + Y+ + ++ YI Sbjct: 457 PVALAARTLPVLAEQAPPRDFPAAPAGEEAAPSVMIQPACAADDPYENAVLIGELFGTYI 516 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + + ++++D+HAAHERL++ ++ Q LLTP + L E A ++EH Sbjct: 517 VLENGPEMILIDKHAAHERLLYNRL--VAAGPGEDRQLLLTPVSVHLSPEEHAAVLEHAP 574 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L R G+ E FG + +RE +L+ ++ ++ + +++ + +E + Sbjct: 575 LLARAGVGIEDFGDGFVVVREAAPVLADADLAAIVTECAQKLL-LANERLTPHVLEELYH 633 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 TMAC +I++ + + + +L+ + + ++ C HGRP I++ +IEK FGR Sbjct: 634 TMACRSAIKAHDRTAAPTLRQLVELLRADGDADHCPHGRPVSIRMSRHEIEKKFGR 689 >gi|308069370|ref|YP_003870975.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa E681] gi|305858649|gb|ADM70437.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa E681] Length = 724 Score = 350 bits (897), Expect = 5e-94, Method: Composition-based stats. Identities = 128/398 (32%), Positives = 208/398 (52%), Gaps = 8/398 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L E I NQIAAGE++ERP+ +KEL+EN++DA +RV+ + GG ++TDNG Sbjct: 3 KIRVLDEHIANQIAAGEVVERPASVVKELVENAIDAGGTRVDVWVEEGGLQSIRVTDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A RH TSKI D I + GFRGEALPSI AVS + L++ + Sbjct: 63 GIEPEDVETAFYRHATSKIGHGRDLFQITSLGFRGEALPSIAAVSKVELLTAAGDDGRAR 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G K+ A GT VR+LF+ PARL ++K+ Q E I+DV+ RMA+++ Sbjct: 123 KLVIEGGKLVLHEDAASRQGTDFTVRELFYNTPARLKYMKTIQTELGHISDVLYRMALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+FT + + NG+ + I+ + G + + L +S + + GY Sbjct: 183 PEVAFTLRHNGN---TLLQTLGNGDLLQVIAAIYGTSAAKSMLLLEGESLDYRISGYISR 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + R N N +NGR V+ + + AY +P+ R+P+ V+ LE+ P VDVNV Sbjct: 240 PEWTRSNRNAISTVVNGRFVRSYGLNQALLKAYHTLLPINRFPLAVIQLEMHPSLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV---LSKKMISSFHQDNAPKTHLP 356 HPAK +RF T + + S++ + ++ + +V + K SF Q+ + Sbjct: 300 HPAKLEVRFSKETELFQLVEDSVKAVLGQQVLIPKAVKREIGGKDSGSFVQEQFHFSKGN 359 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 + +++ +++ + Y + N+ Sbjct: 360 GAEGDAPSGKDRGGALPLSVASPESQLPRQSNYLDRNE 397 Score = 183 bits (464), Expect = 9e-44, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 1/198 (0%) Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 E E + Q H Y+I+Q GL ++DQHAAHER+ +E + F + SQ Sbjct: 526 EVPELPTFPELNLIGQHHGTYLIAQNDQGLYLIDQHAAHERVNYEFYYEKFGNPASVSQE 585 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 LL P +D E + + G+ E FG + P L + ++ ++ Sbjct: 586 LLLPITLDFTPSETEKLKTRLHWFEQAGVYLEHFGGQTFRVSSYPYWLPQGEEADIIEEM 645 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 +++ L E +C SI++ +K+ + LL + C HG Sbjct: 646 AGWVLEERAID-LAKLREAASIMCSCRASIKANQKLTDQQAIVLLERLAACKQPYTCPHG 704 Query: 577 RPTFIKLKLSDIEKLFGR 594 RP + D+EKLF R Sbjct: 705 RPIVVSFSTYDLEKLFKR 722 >gi|329943289|ref|ZP_08292063.1| DNA mismatch repair MutL family protein [Chlamydophila psittaci Cal10] gi|332287867|ref|YP_004422768.1| DNA mismatch repair protein [Chlamydophila psittaci 6BC] gi|313848439|emb|CBY17443.1| DNA mismatch repair protein MutL [Chlamydophila psittaci RD1] gi|325506749|gb|ADZ18387.1| DNA mismatch repair protein [Chlamydophila psittaci 6BC] gi|328814836|gb|EGF84826.1| DNA mismatch repair MutL family protein [Chlamydophila psittaci Cal10] Length = 582 Score = 350 bits (897), Expect = 5e-94, Method: Composition-based stats. Identities = 140/520 (26%), Positives = 253/520 (48%), Gaps = 14/520 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L INQIAAGE+IE +KEL+EN+LDA + +E GGG+ + DNG G Sbjct: 7 IQLLDTVTINQIAAGEVIENAISVVKELVENALDAGADEIEVETLGGGQGLIVVKDNGCG 66 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+SEE+ +A++RH TSKI + D ++ +FGFRGEALP+I ++S + ++S P G++ Sbjct: 67 MSSEEVTLALKRHATSKIEEFSDVFSLSSFGFRGEALPAIASISKMEILSCPKGGE-GSR 125 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G ++ + GT + V LF+ +P R F KS Q + + ++ ++ Sbjct: 126 TIIHGGEVIAAEAKPRQLGTTISVDSLFYNVPVRRGFQKSPQTDRIAMRKLLENRILSIE 185 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V +++ + + + + ER++ V+GE F+ A+ ++ I + G+ G P Sbjct: 186 GVGWSWISERQQEFHILKHQG---LAERVAFVMGEGFMKEALRVDRVEEPIRIVGFLGSP 242 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F+R +FIN R V I I AYA +P RYPV VL L + P+ D NVH Sbjct: 243 CFHRPTRLGQRIFINDRPVDSALISKQISEAYAMLLPPQRYPVFVLKLYLPPKWCDFNVH 302 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--FHQDNAPKTHLPKY 358 P K+ +R +R F+ +SI + + + S+ S + + + F + P+ + + Sbjct: 303 PQKTEVRILKEDFVREFLSESIGEVLARSQESSISEKTSFTLPTLRFFDEQLPEAPVEEP 362 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 ++ +L R S + + + + E+ + + +I + Sbjct: 363 REPMSLPVTRLATPSIR-SVSFPDCQQEIPSIDTQTEIVWGESQEVRFLTSLGKI----V 417 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +++ ++G+ + AA + L + + + SQ L P +++ E A ++ H E Sbjct: 418 LAEDSEGVHAIFTEAARKHLFYLSLIESQQEH-YKSQFFLVPLCLEVTPQERAFLLSHIE 476 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 + +LGI+ + GP AI P + ++ + + + Sbjct: 477 EFKQLGIEISQMGPCVFAIESAPTFIGEEELKSWILSLAA 516 >gi|109900275|ref|YP_663530.1| DNA mismatch repair protein MutL [Pseudoalteromonas atlantica T6c] gi|109702556|gb|ABG42476.1| DNA mismatch repair protein MutL [Pseudoalteromonas atlantica T6c] Length = 639 Score = 349 bits (896), Expect = 6e-94, Method: Composition-based stats. Identities = 155/593 (26%), Positives = 256/593 (43%), Gaps = 56/593 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L ++ NQIAAGE++ERP+ +KEL+ENSLD+ +S+++ I GG I DNG Sbjct: 7 TIRILPAQLANQIAAGEVVERPASVVKELVENSLDSGASQIDIEIDKGGHKRICIRDNGG 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A+ RH TSKIS DD +IH+ GFRGEAL SI +V+ LTL S+P Sbjct: 67 GIEKDQLALALSRHATSKISSLDDLEHIHSLGFRGEALASISSVARLTLTSKPINQPQAW 126 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q G + PVA G+ VEV DLFF PAR FL++E+ E N I +VIRR++++ Sbjct: 127 QAHAEGRDMQVQLNPVAHPDGSSVEVIDLFFNTPARRKFLRAEKTEFNHIDEVIRRISLS 186 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 VSF+ K + + +R+ + +DF N A+ L+ ++ L G+ Sbjct: 187 RFDVSFSLKHNGKLLRKYPALTEQTDHLKRLGAICNKDFANTAIALDSHYQDMELIGWIT 246 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P ++ Y ++NGR ++DK I IR A+ I P VL L I +VDVN Sbjct: 247 PPDATTQQSDVQYFYVNGRMMRDKLINHAIRQAFEGVISPDSSPNYVLYLNIAHHEVDVN 306 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHPAK +RF ++ +FI +++ I++ +T + ++ + L Sbjct: 307 VHPAKHEVRFHQARLVHDFIFRALADGIHQYFSNTPAQSGPSQLAEVALQHDYIAPLQSA 366 Query: 359 ATSLTNTQEKLFLQENRLSTND--------LLPSDDPTYSEDNDPVEES----------- 399 S T E + S+ D L SD+ + V+ Sbjct: 367 QQSSTGVAEGEPASQMHSSSPDYSSALSSESLTSDNHPLNNTAGRVQAPGSGSGSGSGSG 426 Query: 400 ----------------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAA---HERLIF 440 + + +Q V VD+ E + Sbjct: 427 SGSGSGSGNSLSAQAVKGYQQLMSAQHVLNSDVTHSAQNEHLCVPVDEERLLVLFEAQHY 486 Query: 441 ---------EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 + F++ SQ LL P I + E L ++ + Sbjct: 487 VLTIRALVAAHISTTFDTDNCVSQPLLMPVSIVADQPALQRAQAMYEALLNNRVEI-GWS 545 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 + ++++P+ + +L +++D + + ++ +A + Sbjct: 546 QKRVILKKVPSGMRHLPWANILPELLDNAVSGEN-----EVKTHLFNCIALHS 593 >gi|328915129|gb|AEB55962.1| DNA mismatch repair protein hexb, putative [Chlamydophila psittaci 6BC] Length = 617 Score = 349 bits (896), Expect = 7e-94, Method: Composition-based stats. Identities = 140/520 (26%), Positives = 253/520 (48%), Gaps = 14/520 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L INQIAAGE+IE +KEL+EN+LDA + +E GGG+ + DNG G Sbjct: 42 IQLLDTVTINQIAAGEVIENAISVVKELVENALDAGADEIEVETLGGGQGLIVVKDNGCG 101 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+SEE+ +A++RH TSKI + D ++ +FGFRGEALP+I ++S + ++S P G++ Sbjct: 102 MSSEEVTLALKRHATSKIEEFSDVFSLSSFGFRGEALPAIASISKMEILSCPKGGE-GSR 160 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G ++ + GT + V LF+ +P R F KS Q + + ++ ++ Sbjct: 161 TIIHGGEVIAAEAKPRQLGTTISVDSLFYNVPVRRGFQKSPQTDRIAMRKLLENRILSIE 220 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V +++ + + + + ER++ V+GE F+ A+ ++ I + G+ G P Sbjct: 221 GVGWSWISERQQEFHILKHQG---LAERVAFVMGEGFMKEALRVDRVEEPIRIVGFLGSP 277 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F+R +FIN R V I I AYA +P RYPV VL L + P+ D NVH Sbjct: 278 CFHRPTRLGQRIFINDRPVDSALISKQISEAYAMLLPPQRYPVFVLKLYLPPKWCDFNVH 337 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--FHQDNAPKTHLPKY 358 P K+ +R +R F+ +SI + + + S+ S + + + F + P+ + + Sbjct: 338 PQKTEVRILKEDFVREFLSESIGEVLARSQESSISEKTSFTLPTLRFFDEQLPEAPVEEP 397 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 ++ +L R S + + + + E+ + + +I + Sbjct: 398 REPMSLPVTRLATPSIR-SVSFPDCQQEIPSIDTQTEIVWGESQEVRFLTSLGKI----V 452 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +++ ++G+ + AA + L + + + SQ L P +++ E A ++ H E Sbjct: 453 LAEDSEGVHAIFTEAARKHLFYLSLIESQQEH-YKSQFFLVPLCLEVTPQERAFLLSHIE 511 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 + +LGI+ + GP AI P + ++ + + + Sbjct: 512 EFKQLGIEISQMGPCVFAIESAPTFIGEEELKSWILSLAA 551 >gi|170691336|ref|ZP_02882501.1| DNA mismatch repair protein MutL [Burkholderia graminis C4D1M] gi|170143541|gb|EDT11704.1| DNA mismatch repair protein MutL [Burkholderia graminis C4D1M] Length = 707 Score = 349 bits (895), Expect = 8e-94, Method: Composition-based stats. Identities = 126/370 (34%), Positives = 199/370 (53%), Gaps = 11/370 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 38 IQPLPDQLISQIAAGEVVERPASVVKELLENALDAGAQTLRIMLDEGGVKRISITDDGCG 97 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ +A+ RH TSKI + + T GFRGEAL SI +V+ +T+ SR + Sbjct: 98 IPENELALALMRHATSKIRSLAELEAVATLGFRGEALASIASVAQMTITSRTADAPHAMR 157 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + + P A GT +EVR+L+F PAR FLKSEQ E + IRR A+A P Sbjct: 158 V---DAQTGVLSPAAGTQGTTIEVRELYFNTPARRKFLKSEQTELGHCLEQIRRAALARP 214 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++GE F + L+E + + + G G+P Sbjct: 215 DVAISVLHNGKAVEHWNASEPP----VRVAKILGETFATAHLPLDESAGPLAVYGCAGLP 270 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG ++Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 271 TASRGRSDQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 330 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL--PKY 358 P+K +RFR+ I F+ ++Q+A+ + ++ + + L P + Sbjct: 331 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHLQASAGGGVSLGTPAF 390 Query: 359 ATSLTNTQEK 368 S T Sbjct: 391 GASSFGTSPS 400 Score = 210 bits (535), Expect = 5e-52, Method: Composition-based stats. Identities = 78/230 (33%), Positives = 122/230 (53%), Gaps = 2/230 (0%) Query: 365 TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 Q+ L E R S + + + S + + A LG A QIH Y+++Q Sbjct: 478 AQQGATLFEARDSAAEGASPYNTSASYASPTF--NPADDQPLGFALGQIHGIYVLAQNAH 535 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GLVIVD HAAHER+++E+ + I Q LL P+ + E + E + L LG Sbjct: 536 GLVIVDMHAAHERILYEQFKNALADRTIAVQPLLIPQTMQADAVEIGTVDEERDTLDALG 595 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 P +AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ Sbjct: 596 FDLAVLSPTTLAIRAVPALLKDADLQALARAVLSDLHAYGGSRVLTERQHELLGTLACHH 655 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++R+ R++ EMN LLR+ME + QCNHGRPT+ +L LSD+++LF R Sbjct: 656 AVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLSDLDRLFMR 705 >gi|295094833|emb|CBK83924.1| DNA mismatch repair protein MutL [Coprococcus sp. ART55/1] Length = 717 Score = 349 bits (895), Expect = 9e-94, Method: Composition-based stats. Identities = 123/430 (28%), Positives = 217/430 (50%), Gaps = 9/430 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + IN+IAAGE+IE+PS IKEL+ENS+D+ ++ V + GGG SF ++TDNG G Sbjct: 2 IKVLDQNTINKIAAGEVIEKPSSVIKELVENSIDSGATAVTVEVKGGGLSFLRVTDNGAG 61 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A RH TSK+ +D +I + GFRGEAL SI AV+ + ++++ + TG + Sbjct: 62 IKKDEVKLAFLRHATSKLVTVEDLLSISSLGFRGEALASIAAVAQVEMITKTADDVTGLR 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G K S + GT + VR+LF+ PAR F+K++ ET+ I D++ R+ +++P Sbjct: 122 YQIHGGKEISSEEIGAPGGTTIIVRNLFYNTPARKKFMKTDATETSYIYDLMCRICMSHP 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF F +++ F S NG + I + G D +N +E+N +++ + + GY P Sbjct: 182 EISFKFIANGTDKL---FTSGNGKLRDIIYHIYGRDITSNLLEINAENDYMKISGYIARP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +RGN + ++N R ++ + I A+ + + ++P + ++ P +DVNVH Sbjct: 239 CISRGNRSFEGYYVNHRYIKSAVLTKAIEDAFRTFVMIHKFPFTEINFQVRPDLLDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K ++F N I +F +I++ + K + K + + + K Sbjct: 299 PTKMELKFANSQDIYSFTYNAIRETLLFKELIPDVAPGKDP----KPETFKQRDVGKAPE 354 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 + N + + ++ + P N P + A I Sbjct: 355 AFENKRREAIVRAEERTVPQSQPEQHRPAEPQNQPEQLRSAETQTSPQQLCPIEPQTSSQ 414 Query: 421 QTTDGLVIVD 430 + I+D Sbjct: 415 PVHPVIEIID 424 Score = 196 bits (497), Expect = 1e-47, Method: Composition-based stats. Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 3/250 (1%) Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 ++ A P + TQ+ + + + + EA Sbjct: 469 VNESPAYTAPAPARPSVTAATQDSTVSAASAAAYIEEAGKKYVQQDMFQEKFLTKEARAK 528 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 Q+ + Y + + I+DQHAAHE++ +E++ +++ + KI SQ L+ P ++ Sbjct: 529 HRL--IGQLFKTYWLIEYDGKFFIMDQHAAHEKVKYEELMENYKNKKIYSQYLMPPAVVT 586 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L E + E+ + LG + E FG + +P L + +L D I + S+ Sbjct: 587 LSAAEIEFLHENMDMFEALGYQIENFGGREFKLNAVPDNLFGLDGRELFIDFIADASSSA 646 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 T+ I L+TMAC +I+ ++ E + L+ ++ K N C HGRPT I + Sbjct: 647 KKVTIDTFIHK-LSTMACKAAIKGNTEISFKEADALIDQLLKLENPYTCPHGRPTVISMT 705 Query: 585 LSDIEKLFGR 594 ++IEK F R Sbjct: 706 EAEIEKKFKR 715 >gi|323524833|ref|YP_004226986.1| DNA mismatch repair protein MutL [Burkholderia sp. CCGE1001] gi|323381835|gb|ADX53926.1| DNA mismatch repair protein MutL [Burkholderia sp. CCGE1001] Length = 682 Score = 349 bits (895), Expect = 1e-93, Method: Composition-based stats. Identities = 122/336 (36%), Positives = 192/336 (57%), Gaps = 9/336 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 26 IQPLPDQLISQIAAGEVVERPASVVKELLENALDAGARTLRIMLDEGGVKRISITDDGCG 85 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ +A+ RH TSKI + + T GFRGEAL SI +V+ +T+ SR + Sbjct: 86 IPENELALALMRHATSKIRSLAELEAVATLGFRGEALASIASVAQMTITSRTADAPHAVR 145 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + + P A GT +EVR+L+F PAR FLKSEQ E + IRR A+A P Sbjct: 146 V---DAQTGVLSPAAGTQGTTIEVRELYFNTPARRKFLKSEQTELGHCLEQIRRAALARP 202 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++GE F + L+E + + + G G+P Sbjct: 203 DVAISVLHNGKAVEHWNASEPP----VRVAKILGETFATAHLPLDESAGPLAVYGCAGLP 258 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG ++Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 259 TASRGRSDQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 318 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 P+K +RFR+ I F+ ++Q+A+ + ++ Sbjct: 319 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET 354 Score = 213 bits (542), Expect = 7e-53, Method: Composition-based stats. Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 2/251 (0%) Query: 344 SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 Q A L S T + L E R S + + + + ++ Sbjct: 432 PVAQPLAFYDALFGRKDSSAATAQGATLFEARDSAAEGPSPYNASAPHASPAFHPAD--D 489 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 LG A QIH Y+++Q GLVIVD HAAHER+++E+ + I Q LL P+ + Sbjct: 490 QPLGFALGQIHGIYVLAQNAHGLVIVDMHAAHERILYEQFKNALADRTIAVQPLLIPQTL 549 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 E + E E L LG P +AIR +PA+L ++ L R ++ ++ Sbjct: 550 QADPVEIGTVEEERETLDALGFDLAILSPTTLAIRAVPALLKDADLQALARAVLSDLHAY 609 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRPT+ +L Sbjct: 610 GGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQL 669 Query: 584 KLSDIEKLFGR 594 LSD+++LF R Sbjct: 670 TLSDLDRLFMR 680 >gi|332304701|ref|YP_004432552.1| DNA mismatch repair protein MutL [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172030|gb|AEE21284.1| DNA mismatch repair protein MutL [Glaciecola agarilytica 4H-3-7+YE-5] Length = 667 Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats. Identities = 166/644 (25%), Positives = 283/644 (43%), Gaps = 79/644 (12%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L ++ NQIAAGE++ERP+ +KEL+ENSLD+ +S+++ I GG I DNG G Sbjct: 8 IRILPAQLANQIAAGEVVERPASVVKELVENSLDSGASQIDIEIDKGGHKRICIRDNGGG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ +A+ RH TSKIS DD +IH+ GFRGEAL SI +V+ LTL S+P Q Sbjct: 68 IEKDQLALALSRHATSKISSLDDLEHIHSLGFRGEALASISSVARLTLTSKPKSQQQAWQ 127 Query: 121 IAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G + PVA GT VEV DLFF PAR FL++E+ E N I ++IRR++++ Sbjct: 128 AHAQGRDMEVQLNPVAHPDGTCVEVIDLFFNTPARRKFLRAEKTEFNHIDEIIRRISLSR 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 VSF+ K + + +R+ + +DF + A+ L+ ++TL G+ Sbjct: 188 FDVSFSLKHNGKLLRKYPALTQQTDHLKRLGAICNKDFASTAIALDSHYQDMTLSGWIAP 247 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P ++ Y ++NGR ++DK I IR A+ I P VL L I +VDVNV Sbjct: 248 PDVAHQQSDVQYFYVNGRMMRDKLINHAIRQAFEGVIHPDSSPNYVLYLNITHNEVDVNV 307 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +RF ++ +FI ++I I++ S ++ + L Sbjct: 308 HPAKHEVRFHQARLVHDFIFRAIADGIHQYFSDAPSQAGPNELAEVAPQHDYIAPLQSAP 367 Query: 360 TSLTNTQEK--------------LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 NTQE+ + ++LS N+ S + + + D + ++ + Q Sbjct: 368 QETENTQEQIEQRPHNQFVRAPYADNEASKLSVNESQFSSGYSPATNGDTRAQQQSDNMQ 427 Query: 406 L------------------------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF- 440 AQ + Y +T+ + D + E Sbjct: 428 NVAGEAPQRNGNSAPRSAASRPGSGNSVSAQAVKGYQQLMSTNKTLSADVSSPIENHHLC 487 Query: 441 -----EKMRQDFN---------------------STKITSQTLLTPEIIDLLEGECALIM 474 E++ F+ + +Q LL P I + Sbjct: 488 LPVDDERLLVLFDAQHYVLPANALVAAHLSTTFDEQNMVAQPLLMPVSIAADKETLHCAQ 547 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 + L ++ + I +R++P+ + + +L D++D + + + +Q E Sbjct: 548 ALYDALLNNRVEI-GWSQKRIILRKVPSGMRQLPWANILPDLLDTQMSTESPEKMQSIDE 606 Query: 535 -----NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 ++ +A + K+ ++M+++ + +P S Sbjct: 607 SAVKAHLFHCIALHSP-----KLTPLQMHKMWMTLHDHPKSFNT 645 >gi|149910178|ref|ZP_01898824.1| DNA mismatch repair protein [Moritella sp. PE36] gi|149806764|gb|EDM66728.1| DNA mismatch repair protein [Moritella sp. PE36] Length = 674 Score = 348 bits (892), Expect = 2e-93, Method: Composition-based stats. Identities = 136/482 (28%), Positives = 223/482 (46%), Gaps = 6/482 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERPS +KELIENS+DA ++R++ I GG +I DNG Sbjct: 1 MTIKILPPRLANQIAAGEVVERPSSVVKELIENSIDAGATRIDIDIEKGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ +A+ RH TSK++ DD I + GFRGEAL SI +VS LT SR Sbjct: 61 SGVEKDQLGLALSRHATSKLATLDDLEAIDSLGFRGEALASISSVSRLTFTSRTQAQTEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q G + ++P A GT VEV DLFF PAR FL++++ E N I ++++R+A+ Sbjct: 121 WQAYAEGRDMQVKIKPAAHPIGTTVEVVDLFFNTPARRKFLRTDKTEFNHIDELVKRIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + T ST R++ + +F+ N + L+ + ++I L G+ Sbjct: 181 SRFDLQVTLKHNGKVIRSYRPASTVEQQERRVASITSTNFMANCMALDCEHSDIKLWGWI 240 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G+P N + Y ++NGR ++DK I +R AY E + P VL +E+ R+VDV Sbjct: 241 GLPHDNAPM-DVQYSYVNGRMMRDKLINHALRQAYEEATGIAAPPAYVLFIEVSVREVDV 299 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF ++ +FI Q + KAI + + + + + + Sbjct: 300 NVHPAKHEVRFHQARLVHDFIFQGVFKAITEGISPSMPAAELPVQEAI--SYPGQAPITS 357 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 + T E + + D + + + D + Y + Sbjct: 358 NGNASEQTTEHGMVHAGIADSADYNVNASISTAAYGDVMPMQNKHGYGVTDKRQGSTSAT 417 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 S + D+ +A + + Q + Q + +G Sbjct: 418 SSSYAQQRQYMPDKPSAGAIKQYNHLLQPSKAEITELQQAARNTTTSVNQGRQVASNTQS 477 Query: 478 ED 479 + Sbjct: 478 NE 479 >gi|307728546|ref|YP_003905770.1| DNA mismatch repair protein MutL [Burkholderia sp. CCGE1003] gi|307583081|gb|ADN56479.1| DNA mismatch repair protein MutL [Burkholderia sp. CCGE1003] Length = 690 Score = 347 bits (891), Expect = 2e-93, Method: Composition-based stats. Identities = 122/336 (36%), Positives = 193/336 (57%), Gaps = 9/336 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 29 IQPLPDQLISQIAAGEVVERPASVVKELLENALDAGARTLRILLDEGGVKRISITDDGCG 88 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ +A+ RH TSKI + + T GFRGEAL SI +V+ +T+ SR + + Sbjct: 89 IPENELTLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAQMTITSRTAEAPHAMR 148 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + + P A GT +EVR+L+F PAR FLKSEQ E + IRR A+A P Sbjct: 149 V---DAQTGVLSPAAGAQGTTIEVRELYFNTPARRKFLKSEQTELGHCLEQIRRAALARP 205 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++GE F + L+E + + + G G+P Sbjct: 206 DVAISVLHNGKAVEHWNASEPP----VRVAKILGETFATAHLPLDESAGPLAIYGCAGLP 261 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG ++Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 262 TASRGRSDQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 321 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 P+K +RFR+ I F+ ++Q+A+ + ++ Sbjct: 322 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET 357 Score = 209 bits (533), Expect = 7e-52, Method: Composition-based stats. Identities = 82/251 (32%), Positives = 125/251 (49%), Gaps = 2/251 (0%) Query: 344 SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 Q A L + T + L E R S ++ S S P + A Sbjct: 440 PVAQPLAFYDALFGRKDTQAGTSQAATLFEARDSAAEV--SSPYNPSAPYAPPAFNPADD 497 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 LG A QIH Y+++Q GLVIVD HAAHER+++E+ + I Q LL P+ + Sbjct: 498 QPLGFALGQIHGIYVLAQNAHGLVIVDMHAAHERILYEQFKNALADRSIAVQPLLIPQTM 557 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 E + E L LG P +AIR +PA+L ++ L R ++ ++ Sbjct: 558 QADAVEIGTVEEERATLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLSDLHAY 617 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRPT+ +L Sbjct: 618 GGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQL 677 Query: 584 KLSDIEKLFGR 594 L+D+++LF R Sbjct: 678 TLADLDRLFMR 688 >gi|32475085|ref|NP_868079.1| DNA mismatch repair protein [Rhodopirellula baltica SH 1] gi|32445625|emb|CAD75626.1| DNA mismatch repair protein [Rhodopirellula baltica SH 1] Length = 705 Score = 347 bits (891), Expect = 2e-93, Method: Composition-based stats. Identities = 124/372 (33%), Positives = 203/372 (54%), Gaps = 8/372 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L ++NQIAAGE+IERP+ +KEL+ENS+DA S+R+E + GGG +I+D+G G Sbjct: 15 IRQLPAHLVNQIAAGEVIERPASVVKELLENSIDAGSTRIELSLEGGGVELIRISDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 MT+E++P+AV H TSK+ DD ++ T GFRGEAL SI +VS +T+ SR + G Q Sbjct: 75 MTAEQLPLAVTSHATSKLPDDESLFHVGTLGFRGEALASIASVSQMTIRSRAEGQDGGCQ 134 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G I + P GT++EVR+LFF P R FLK+ Q E I + R+A+A P Sbjct: 135 IDIRGGVIETPGPCGCPVGTVIEVRNLFFNTPVRRKFLKTPQTERGHIVEAFTRLALANP 194 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 KV F + + + + I G + + + + + + GY P Sbjct: 195 KVHFVLRNGDKEMFDLLPTTRWADR---IESFFGTEISEALIPIENQDETVQISGYACDP 251 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + +RGN Y+F+NGR ++D+ + + AY + +GR+PV L + + +DVNVH Sbjct: 252 SVSRGNNRMQYLFLNGRHIRDRALQHALGEAYRGMLMVGRHPVCFLRMRMPADMIDVNVH 311 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 PAK +RF + + + ++Q++++ + S+ + M + P++ + Sbjct: 312 PAKLEVRFTDSGRVYSRLLQTLRQRFLSTDMTHRVGSNPVPAPMSEEEQRQTVPESVMGM 371 Query: 358 YATSLTNTQEKL 369 + ++ + Sbjct: 372 RPNEVDQQRQSV 383 Score = 179 bits (453), Expect = 2e-42, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 M + +P T P A+ + + + + ++ D + + ++ + + Sbjct: 433 MTAPSAPLASPNTWSPGSASGIDSQRPSTAAEGIEMTPWDGDNAGESNANDSGTTISPHD 492 Query: 401 ATH------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM--RQDFNSTKI 452 A+ + Q+HQ Y+++Q G+V++DQHA HER+++E++ + + Sbjct: 493 ASQSAGVPTPSVSHLGFQVHQRYLVTQDEKGMVVIDQHALHERVLYERVCQKVLHEDASL 552 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 +Q LL PE + L E A +E + L R+G++ E FG I I+ PA+L K + Sbjct: 553 EAQQLLVPEPVSLTPAERAAALEVKDTLSRIGLEIEDFGGETILIQSYPAMLPNKPPADM 612 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 LR +++ ++ + +D + ++L+T+AC ++++G + E+ LL + + + Sbjct: 613 LRTVLESVMGAGRDPNPKDLLNHLLSTVACKAAVKAGDPLSPEEITSLLEQKDLYQETHH 672 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT + +++++FGR Sbjct: 673 CPHGRPTALFFSRDELDRMFGR 694 >gi|327542505|gb|EGF28980.1| DNA mismatch repair protein MutL [Rhodopirellula baltica WH47] Length = 705 Score = 347 bits (890), Expect = 3e-93, Method: Composition-based stats. Identities = 124/372 (33%), Positives = 203/372 (54%), Gaps = 8/372 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L ++NQIAAGE+IERP+ +KEL+ENS+DA S+R+E + GGG +I+D+G G Sbjct: 15 IRQLPAHLVNQIAAGEVIERPASVVKELLENSIDAGSTRIELSLEGGGVELIRISDDGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 MT+E++P+AV H TSK+ DD ++ T GFRGEAL SI +VS +T+ SR + G Q Sbjct: 75 MTAEQLPLAVTSHATSKLPDDESLFHVGTLGFRGEALASIASVSQMTIRSRAEGQDGGCQ 134 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I I G I + P GT++EVR+LFF P R FLK+ Q E I + R+A+A P Sbjct: 135 IDIRGGVIETPGPCGCPVGTVIEVRNLFFNTPVRRKFLKTPQTERGHIVEAFTRLALANP 194 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 KV F + + + + I G + + + + + + GY P Sbjct: 195 KVHFVLRNGDKEMFDLLPTTRWADR---IESFFGTEISEALIPIENQDETVQITGYACDP 251 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + +RGN Y+F+NGR ++D+ + + AY + +GR+PV L + + +DVNVH Sbjct: 252 SVSRGNNRMQYLFLNGRHIRDRALQHALGEAYRGMLMVGRHPVCFLRMRMPADMIDVNVH 311 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 PAK +RF + + + ++Q++++ + S+ + M + P++ + Sbjct: 312 PAKLEVRFTDSGRVYSRLLQTLRQRFLSTDMTHRVGSNPVPAPMSEEEQRQTVPESVMGM 371 Query: 358 YATSLTNTQEKL 369 + ++ + Sbjct: 372 RPNEVDQQRQSV 383 Score = 179 bits (454), Expect = 1e-42, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 M + +P T P A+ + + + + ++ D + + ++ + + Sbjct: 433 MTAPSAPLASPNTWSPGSASGIDSQRPSTAAEGIEMTPWDGDNAGESNANDSGTTISPHD 492 Query: 401 ATH------YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM--RQDFNSTKI 452 A+ + Q+HQ Y+++Q G+V++DQHA HER+++E++ + + Sbjct: 493 ASQSAGVPTPSVSHLGFQVHQRYLVTQDEKGMVVIDQHALHERVLYERICQKVLHEDASL 552 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 +Q LL PE + L E A +E + L R+G++ E FG I I+ PA+L K + Sbjct: 553 EAQQLLVPEPVSLTPAERAAALEVKDTLSRIGLEIEDFGGETILIQSYPAMLPNKPPADM 612 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 LR +++ ++ + +D + ++L+T+AC ++++G + E+ LL + + + Sbjct: 613 LRTVLESVMGAGRDPNPKDLLNHLLSTVACKAAVKAGDPLSPEEITSLLEQKDLYQETHH 672 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT + +++++FGR Sbjct: 673 CPHGRPTALFFSRDELDRMFGR 694 >gi|293556851|ref|ZP_06675412.1| DNA mismatch repair protein MutL [Enterococcus faecium E1039] gi|291600935|gb|EFF31226.1| DNA mismatch repair protein MutL [Enterococcus faecium E1039] Length = 702 Score = 347 bits (889), Expect = 4e-93, Method: Composition-based stats. Identities = 136/496 (27%), Positives = 239/496 (48%), Gaps = 19/496 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ ++ G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A +RH TSKI DD I T GFRGEALPSI +VS +TL + + G Sbjct: 63 GILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMTLETANQEEKQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G ++ RP + GT + V +LFF PARL ++K+ E I D++ R+A+++ Sbjct: 123 YLSLKGGEVIEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + KM + NG+ + I+ + G +++ K + L GY + Sbjct: 183 PSIAFRLVHDGN---KMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRFIKNFSLNKAIVAGYGSKLMVGRFPIAVLEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-----------SVLSKKMISSFHQD 348 HP K +R + I +IQKA++++ + S K Sbjct: 300 HPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQPKTEQIEIDLS 359 Query: 349 NAPKTHLPKYATSLTNTQE--KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 A + PK +SL +E F++E + + D + E+ E T+ + Sbjct: 360 YAFEEEKPKKPSSLNFDRETGTFFVEEPKNTFVDRIVDKSVENVENYSGFSEENTTYPEK 419 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 + + + ++ EK ++ + + + E + L Sbjct: 420 TAKTVDKFGENVDNFVEKTVEKSEKKEFPIVDNMEKTNEEQADKSVEEEEQIYEEELTLH 479 Query: 467 EGECALIMEHDEDLHR 482 +D+ L + Sbjct: 480 PE-FDFTQGNDKTLEQ 494 Score = 196 bits (499), Expect = 8e-48, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 1/197 (0%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + Q+H Y+ +Q++DGL I+DQHAA ER+ +E R+ Q L Sbjct: 502 EKPVQRFPQLEYFGQMHGTYLFAQSSDGLYIIDQHAAQERIKYEYFREKIGEVSDDLQEL 561 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P ++D + + E L GI E FG N+ +R P ++R++I Sbjct: 562 LVPFVLDYPNSDALKLKEQKHLLEDAGIYLEEFGQNSFIVRAHPTWYPNGEEESIIREMI 621 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D ++ + +++ E M+C SI++ + + LL+++ + N C HGR Sbjct: 622 DMLLTTGNV-SVKKFREATAIMMSCKRSIKANHYLNEAQARVLLKDLARCENPFNCPHGR 680 Query: 578 PTFIKLKLSDIEKLFGR 594 P I SD+E++F R Sbjct: 681 PVLIHFTNSDMERMFKR 697 >gi|293567846|ref|ZP_06679187.1| DNA mismatch repair protein MutL [Enterococcus faecium E1071] gi|291589431|gb|EFF21238.1| DNA mismatch repair protein MutL [Enterococcus faecium E1071] Length = 702 Score = 347 bits (889), Expect = 4e-93, Method: Composition-based stats. Identities = 136/496 (27%), Positives = 238/496 (47%), Gaps = 19/496 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ ++ G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A +RH TSKI DD I T GFRGEALPSI +VS +TL + + G Sbjct: 63 GILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMTLETANQEEKQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G ++ RP + GT + V +LFF PARL ++K+ E I D++ R+A+++ Sbjct: 123 YLSLKGGEVIEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + KM + NG+ + I+ + G +++ K + L GY + Sbjct: 183 PSIAFRLVHDGN---KMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRFIKNFSLNKAIVAGYGSKLMVGRFPIAVLEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-----------SVLSKKMISSFHQD 348 HP K +R + I +IQKA++++ + S K Sbjct: 300 HPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQPKTEQIEIDLS 359 Query: 349 NAPKTHLPKYATSLTNTQE--KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 A + PK +SL +E F++E + + D + E+ E T+ + Sbjct: 360 YAFEEEKPKKPSSLNFDRETGTFFVEEPKNTFVDRIVDKSVENVENYSGFSEENTTYPEK 419 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 + + + ++ EK ++ + + E + L Sbjct: 420 TAKTVDKFGENVDNFVEKTVEKSEKKEFPIVDNMEKTNEEQADKSVEEDEKIYEEELTLH 479 Query: 467 EGECALIMEHDEDLHR 482 +D+ L + Sbjct: 480 PE-FDFTQGNDKTLEQ 494 Score = 196 bits (499), Expect = 7e-48, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 1/197 (0%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + Q+H Y+ +Q++DGL I+DQHAA ER+ +E R+ Q L Sbjct: 502 EKPVQRFPQLEYFGQMHGTYLFAQSSDGLYIIDQHAAQERIKYEYFREKIGEVSDDLQEL 561 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P ++D + + E L GI E FG N+ +R P ++R++I Sbjct: 562 LVPFVLDYPNSDALKLKEQKHLLEDAGIYLEEFGQNSFIVRAHPTWYPNGEEESIIREMI 621 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D ++ + + +++ E M+C SI++ + + LL+++ + N C HGR Sbjct: 622 DMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEAQARVLLKDLARCENPFNCPHGR 680 Query: 578 PTFIKLKLSDIEKLFGR 594 P I SD+E++F R Sbjct: 681 PVLIHFTNSDMERMFKR 697 >gi|294619659|ref|ZP_06699077.1| DNA mismatch repair protein MutL [Enterococcus faecium E1679] gi|291594096|gb|EFF25552.1| DNA mismatch repair protein MutL [Enterococcus faecium E1679] Length = 702 Score = 347 bits (889), Expect = 4e-93, Method: Composition-based stats. Identities = 136/496 (27%), Positives = 238/496 (47%), Gaps = 19/496 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ ++ G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A +RH TSKI DD I T GFRGEALPSI +VS +TL + + G Sbjct: 63 GILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMTLETANQEEKQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G ++ RP + GT + V +LFF PARL ++K+ E I D++ R+A+++ Sbjct: 123 YLSLKGGEVIEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + KM + NG+ + I+ + G +++ K + L GY + Sbjct: 183 PSIAFRLVHDGN---KMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRFIKNFSLNKAIVAGYGSKLMVGRFPIAVLEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-----------SVLSKKMISSFHQD 348 HP K +R + I +IQKA++++ + S K Sbjct: 300 HPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQPKTEQIEIDLS 359 Query: 349 NAPKTHLPKYATSLTNTQE--KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 A + PK +SL +E F++E + + D + E+ E T+ + Sbjct: 360 YAFEEEKPKKPSSLNFDRETGTFFVEEPKNTFVDRIVDKSVENVENYSGFSEENTTYPEK 419 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 + + + ++ EK ++ + + E + L Sbjct: 420 TAKTVDKFGENVDNFVEKTVEKSEKKEFPVVDNMEKTNEEQADKSVEEDEKIYEEELTLH 479 Query: 467 EGECALIMEHDEDLHR 482 +D+ L + Sbjct: 480 PE-FDFTQGNDKTLEQ 494 Score = 197 bits (500), Expect = 6e-48, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 1/197 (0%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + Q+H Y+ +Q++DGL I+DQHAA ER+ +E R+ Q L Sbjct: 502 EKPVQRFPQLEYFGQMHGTYLFAQSSDGLYIIDQHAAQERIKYEYFREKIGEVSDDLQEL 561 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P ++D + + E L GI E FG N+ +R P ++R++I Sbjct: 562 LVPFVLDYPNSDALKLKEQKHLLEDAGIYLEEFGQNSFIVRAHPTWYPNGEEESIIREMI 621 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D ++ + + +++ E M+C SI++ + + LL+++ + N C HGR Sbjct: 622 DMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEAQARVLLKDLARCENPFNCPHGR 680 Query: 578 PTFIKLKLSDIEKLFGR 594 P I SD+E++F R Sbjct: 681 PVLIHFTNSDMERMFKR 697 >gi|293570768|ref|ZP_06681818.1| DNA mismatch repair protein MutL [Enterococcus faecium E980] gi|291609240|gb|EFF38512.1| DNA mismatch repair protein MutL [Enterococcus faecium E980] Length = 702 Score = 347 bits (889), Expect = 5e-93, Method: Composition-based stats. Identities = 123/370 (33%), Positives = 207/370 (55%), Gaps = 7/370 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ ++ G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A +RH TSKI DD I T GFRGEALPSI +VS +TL + + N G Sbjct: 63 GILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMTLETANQEENQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G ++ RP + GT + V +LFF PARL ++K+ E I D++ R+A+++ Sbjct: 123 YLSLKGGEVLEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + KM + NG+ + I+ + G +++ K + L GY + Sbjct: 183 PSIAFRLVHDGN---KMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ +L +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRFIKNFSLNKAIVAGYGSKLMVGRFPIAILEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I +IQKA++++ + S+ + + PKT + Sbjct: 300 HPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQ--PKTEQIEID 357 Query: 360 TSLTNTQEKL 369 S +EK Sbjct: 358 LSYAFEEEKP 367 Score = 196 bits (499), Expect = 6e-48, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 1/197 (0%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + Q+H Y+ +Q++DGL I+DQHAA ER+ +E R+ Q L Sbjct: 502 EKPVQRFPQLEYFGQMHGTYLFAQSSDGLYIIDQHAAQERIKYEYFREKIGEVSDDLQEL 561 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P ++D + + E L GI E FG N+ +R P ++R++I Sbjct: 562 LVPFVLDYPNSDALKLKEQKHLLEDAGIYLEEFGQNSFIVRAHPTWYPNGEEESIIREMI 621 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D ++ + + +++ E M+C SI++ + + LL+++ + N C HGR Sbjct: 622 DMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEAQARVLLKDLAQCENPFNCPHGR 680 Query: 578 PTFIKLKLSDIEKLFGR 594 P I SD+E++F R Sbjct: 681 PVLIHFTNSDMERMFKR 697 >gi|257893265|ref|ZP_05672918.1| DNA mismatch repair protein [Enterococcus faecium 1,231,408] gi|257829644|gb|EEV56251.1| DNA mismatch repair protein [Enterococcus faecium 1,231,408] Length = 702 Score = 347 bits (889), Expect = 5e-93, Method: Composition-based stats. Identities = 122/370 (32%), Positives = 206/370 (55%), Gaps = 7/370 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ ++ G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A +RH TSKI DD I T GFRGEALPSI +VS +TL + + G Sbjct: 63 GILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMTLETANQEEKQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G ++ RP + GT + V +LFF PARL ++K+ E I D++ R+A+++ Sbjct: 123 YLSLKGGEVMEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + KM + NG+ + I+ + G +++ K + L GY + Sbjct: 183 PTIAFRLVHDGN---KMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ +L +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRFIKNFSLNKAIVAGYGSKLMVGRFPIAILEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I +IQKA++++ + S+ + + PKT + Sbjct: 300 HPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQ--PKTEQIEID 357 Query: 360 TSLTNTQEKL 369 S +EK Sbjct: 358 LSYAFEEEKP 367 Score = 197 bits (500), Expect = 5e-48, Method: Composition-based stats. Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 2/248 (0%) Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQL 406 DNA +T+ + SL ++ + D +D T + +E E+ + Sbjct: 451 DNAKETNKEQIDISLEEDEQIYEEELTLHPEFDFTHGNDKTLEQAIKKLETETPVQRFPQ 510 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q+H Y+ +Q++DGL I+DQHAA ER+ +E R+ Q LL P ++D Sbjct: 511 LEYFGQMHGTYLFAQSSDGLYIIDQHAAQERIKYEYFREKIGEVSDDLQELLVPFVLDYP 570 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 + + E L GI E FG N+ +R P ++R++ID ++ + + Sbjct: 571 NSDALKLKEQKHLLEDAGIYLEEFGQNSFIVRAHPTWYPNGEEESIIREMIDMLLTTG-S 629 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 +++ E M+C SI++ + + LL+++ + N C HGRP I S Sbjct: 630 VSVKKFREATAIMMSCKRSIKANHYLNEAQARVLLKDLAQCENPFNCPHGRPVLIHFTNS 689 Query: 587 DIEKLFGR 594 D+E++F R Sbjct: 690 DMERMFKR 697 >gi|187922756|ref|YP_001894398.1| DNA mismatch repair protein [Burkholderia phytofirmans PsJN] gi|187713950|gb|ACD15174.1| DNA mismatch repair protein MutL [Burkholderia phytofirmans PsJN] Length = 687 Score = 346 bits (888), Expect = 5e-93, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 193/347 (55%), Gaps = 9/347 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELLENALDAGARSLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ +A+ RH TSKI + + T GFRGEAL SI +V+ +T+ SR + Sbjct: 90 IPENELVLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAQMTITSRTADAAHAVR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + P A GT +EVR+L+F PAR FLKSEQ E + IRR A+A P Sbjct: 150 VDADT---GVLSPAAGTQGTTIEVRELYFNTPARRKFLKSEQTELGHCLEQIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++GE F + L+E + + + G G+P Sbjct: 207 DVAISVLHNGKAIEHWNASEPP----VRVAKILGETFATAHLPLDESAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 263 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGERYPSYVLFLDLPPEAVDVNVH 322 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 P+K +RFR+ I F+ ++Q+A+ + ++ + + Sbjct: 323 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHLEP 369 Score = 212 bits (540), Expect = 1e-52, Method: Composition-based stats. Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 2/251 (0%) Query: 344 SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 Q A L + T T E L E R S + + + ++ Sbjct: 437 PVAQPLAFYDALFGRKDTNTGTAEGATLFEARDSAAESPSPYNASAPYPAPAFHAAD--D 494 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 LG A QIH Y+++Q GLVIVD HAAHER+++E+ + I Q LL P+ + Sbjct: 495 QPLGFALGQIHGIYVLAQNAHGLVIVDMHAAHERILYEQFKNALADRTIAVQPLLIPQSM 554 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 E + E + L LG P +AIR +PA+L ++ L R ++ ++ Sbjct: 555 QADPIEIGTVEEERDTLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLSDLHAY 614 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRPT+ +L Sbjct: 615 GGSRVLTERQHEMLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQL 674 Query: 584 KLSDIEKLFGR 594 LSD+++LF R Sbjct: 675 TLSDLDRLFMR 685 >gi|69248278|ref|ZP_00604702.1| DNA mismatch repair protein [Enterococcus faecium DO] gi|257878802|ref|ZP_05658455.1| DNA mismatch repair protein [Enterococcus faecium 1,230,933] gi|257881440|ref|ZP_05661093.1| DNA mismatch repair protein [Enterococcus faecium 1,231,502] gi|257890661|ref|ZP_05670314.1| DNA mismatch repair protein [Enterococcus faecium 1,231,410] gi|258615127|ref|ZP_05712897.1| DNA mismatch repair protein [Enterococcus faecium DO] gi|293563775|ref|ZP_06678214.1| DNA mismatch repair protein MutL [Enterococcus faecium E1162] gi|294621200|ref|ZP_06700385.1| DNA mismatch repair protein MutL [Enterococcus faecium U0317] gi|314938826|ref|ZP_07846097.1| DNA mismatch repair protein [Enterococcus faecium TX0133a04] gi|314943632|ref|ZP_07850386.1| DNA mismatch repair protein [Enterococcus faecium TX0133C] gi|314948711|ref|ZP_07852084.1| DNA mismatch repair protein [Enterococcus faecium TX0082] gi|314952161|ref|ZP_07855179.1| DNA mismatch repair protein [Enterococcus faecium TX0133A] gi|314991865|ref|ZP_07857322.1| DNA mismatch repair protein [Enterococcus faecium TX0133B] gi|314996578|ref|ZP_07861613.1| DNA mismatch repair protein [Enterococcus faecium TX0133a01] gi|35367173|gb|AAN85559.1| MutL [Enterococcus faecium] gi|35367178|gb|AAN85561.1| MutL [Enterococcus faecium] gi|68194463|gb|EAN08963.1| DNA mismatch repair protein [Enterococcus faecium DO] gi|257813030|gb|EEV41788.1| DNA mismatch repair protein [Enterococcus faecium 1,230,933] gi|257817098|gb|EEV44426.1| DNA mismatch repair protein [Enterococcus faecium 1,231,502] gi|257827021|gb|EEV53647.1| DNA mismatch repair protein [Enterococcus faecium 1,231,410] gi|291599196|gb|EFF30228.1| DNA mismatch repair protein MutL [Enterococcus faecium U0317] gi|291604256|gb|EFF33751.1| DNA mismatch repair protein MutL [Enterococcus faecium E1162] gi|313589267|gb|EFR68112.1| DNA mismatch repair protein [Enterococcus faecium TX0133a01] gi|313593570|gb|EFR72415.1| DNA mismatch repair protein [Enterococcus faecium TX0133B] gi|313595693|gb|EFR74538.1| DNA mismatch repair protein [Enterococcus faecium TX0133A] gi|313597669|gb|EFR76514.1| DNA mismatch repair protein [Enterococcus faecium TX0133C] gi|313641837|gb|EFS06417.1| DNA mismatch repair protein [Enterococcus faecium TX0133a04] gi|313644883|gb|EFS09463.1| DNA mismatch repair protein [Enterococcus faecium TX0082] Length = 702 Score = 346 bits (888), Expect = 6e-93, Method: Composition-based stats. Identities = 123/370 (33%), Positives = 206/370 (55%), Gaps = 7/370 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ ++ G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A +RH TSKI DD I T GFRGEALPSI +VS +TL + + G Sbjct: 63 GILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMTLETANQEEKQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G ++ RP + GT + V +LFF PARL ++K+ E I D++ R+A+++ Sbjct: 123 YLSLKGGEVIEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + KM + NG+ + I+ + G +++ K + L GY + Sbjct: 183 PSIAFRLVHDGN---KMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRFIKNFSLNKAIVAGYGSKLMVGRFPIAVLEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I +IQKA++++ + S+ + + PKT + Sbjct: 300 HPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQ--PKTEQIEID 357 Query: 360 TSLTNTQEKL 369 S +EK Sbjct: 358 LSYAFEEEKP 367 Score = 196 bits (499), Expect = 7e-48, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 1/197 (0%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + Q+H Y+ +Q++DGL I+DQHAA ER+ +E R+ Q L Sbjct: 502 EKPVQRFPQLEYFGQMHGTYLFAQSSDGLYIIDQHAAQERIKYEYFREKIGEVSDDLQEL 561 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P ++D + + E L GI E FG N+ +R P ++R++I Sbjct: 562 LVPFVLDYPNSDALKLKEQKHLLEDAGIYLEEFGQNSFIVRAHPTWYPNGEEESIIREMI 621 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D ++ + + +++ E M+C SI++ + + LL+++ + N C HGR Sbjct: 622 DMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEAQARVLLKDLARCENPFNCPHGR 680 Query: 578 PTFIKLKLSDIEKLFGR 594 P I SD+E++F R Sbjct: 681 PVLIHFTNSDMERMFKR 697 >gi|257899422|ref|ZP_05679075.1| DNA mismatch repair protein [Enterococcus faecium Com15] gi|257837334|gb|EEV62408.1| DNA mismatch repair protein [Enterococcus faecium Com15] Length = 702 Score = 346 bits (887), Expect = 7e-93, Method: Composition-based stats. Identities = 122/370 (32%), Positives = 206/370 (55%), Gaps = 7/370 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ ++ G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A +RH TSKI DD I T GFRGEALPSI +VS +TL + + G Sbjct: 63 GILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMTLETANQEEKQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G ++ RP + GT + V +LFF PARL ++K+ E I D++ R+A+++ Sbjct: 123 YLSLKGGEVLEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + KM + NG+ + I+ + G +++ K + L GY + Sbjct: 183 PSIAFRLVHDGN---KMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ +L +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRFIKNFSLNKAIVAGYGSKLMVGRFPIAILEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I +IQKA++++ + S+ + + PKT + Sbjct: 300 HPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQ--PKTEQIEID 357 Query: 360 TSLTNTQEKL 369 S +EK Sbjct: 358 LSYAFEEEKP 367 Score = 196 bits (499), Expect = 7e-48, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 1/197 (0%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + Q+H Y+ +Q++DGL I+DQHAA ER+ +E R+ Q L Sbjct: 502 EKPVQRFPQLEYFGQMHGTYLFAQSSDGLYIIDQHAAQERIKYEYFREKIGEVSDDLQEL 561 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P ++D + + E L GI E FG N+ +R P ++R++I Sbjct: 562 LVPFVLDYPNSDALKLKEQKHLLEDAGIYLEEFGQNSFIVRAHPTWYPNGEEESIIREMI 621 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D ++ + + +++ E M+C SI++ + + LL+++ + N C HGR Sbjct: 622 DMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEAQARVLLKDLAQCENPFNCPHGR 680 Query: 578 PTFIKLKLSDIEKLFGR 594 P I SD+E++F R Sbjct: 681 PVLIHFTNSDMERMFKR 697 >gi|257896448|ref|ZP_05676101.1| DNA mismatch repair protein [Enterococcus faecium Com12] gi|257833013|gb|EEV59434.1| DNA mismatch repair protein [Enterococcus faecium Com12] Length = 702 Score = 346 bits (887), Expect = 7e-93, Method: Composition-based stats. Identities = 127/394 (32%), Positives = 211/394 (53%), Gaps = 18/394 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ ++ G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A +RH TSKI DD I T GFRGEALPSI +VS +TL + + G Sbjct: 63 GILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMTLETANQEEKQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G ++ RP + GT + V +LFF PARL ++K+ E I D++ R+A+++ Sbjct: 123 YLLLKGGEVMEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + KM + NG+ + I+ + G +++ K + L GY + Sbjct: 183 PTIAFRLVHDGN---KMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ +L +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRFIKNFSLNKAIVAGYGSKLMVGRFPIAILEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-----------SVLSKKMISSFHQD 348 HP K +R + I +IQKA++++ + S K Sbjct: 300 HPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQPKTEQIEIDLS 359 Query: 349 NAPKTHLPKYATSLTNTQE--KLFLQENRLSTND 380 A + PK +SL +E F++E R + D Sbjct: 360 YAFEEEKPKKPSSLNFDRETGTFFVEEPRSTFVD 393 Score = 196 bits (498), Expect = 1e-47, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 1/197 (0%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E+ + Q+H Y+ +Q++DGL I+DQHAA ER+ +E R+ Q L Sbjct: 502 ETPVQRFPQLEYFGQMHGTYLFAQSSDGLYIIDQHAAQERIKYEYFREKIGEVSDDLQEL 561 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P ++D + + E L G+ E FG N+ +R P ++R++I Sbjct: 562 LVPFVLDYPNSDALKLKEQKHLLEDAGVYLEEFGQNSFIVRAHPTWYPNGEEESIIREMI 621 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D ++ + + +++ E M+C SI++ + + LL+++ + N C HGR Sbjct: 622 DMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEAQARVLLKDLAQCENPFNCPHGR 680 Query: 578 PTFIKLKLSDIEKLFGR 594 P I SD+E++F R Sbjct: 681 PVLIHFTNSDMERMFKR 697 >gi|227550810|ref|ZP_03980859.1| DNA mismatch repair protein MutL [Enterococcus faecium TX1330] gi|293377535|ref|ZP_06623730.1| DNA mismatch repair protein, C-terminal domain protein [Enterococcus faecium PC4.1] gi|227180047|gb|EEI61019.1| DNA mismatch repair protein MutL [Enterococcus faecium TX1330] gi|292643850|gb|EFF61965.1| DNA mismatch repair protein, C-terminal domain protein [Enterococcus faecium PC4.1] Length = 702 Score = 346 bits (887), Expect = 7e-93, Method: Composition-based stats. Identities = 127/394 (32%), Positives = 211/394 (53%), Gaps = 18/394 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ ++ G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A +RH TSKI DD I T GFRGEALPSI +VS +TL + + G Sbjct: 63 GILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMTLETANQEEKQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G ++ RP + GT + V +LFF PARL ++K+ E I D++ R+A+++ Sbjct: 123 YLLLKGGEVMEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + KM + NG+ + I+ + G +++ K + L GY + Sbjct: 183 PTIAFRLVHDGN---KMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ +L +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRFIKNFSLNKAIVAGYGSKLMVGRFPIAILEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-----------SVLSKKMISSFHQD 348 HP K +R + I +IQKA++++ + S K Sbjct: 300 HPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQPKTEQIEIDLS 359 Query: 349 NAPKTHLPKYATSLTNTQE--KLFLQENRLSTND 380 A + PK +SL +E F++E R + D Sbjct: 360 YAFEEEKPKKPSSLNFDRETGTFFVEEPRSTFVD 393 Score = 196 bits (498), Expect = 1e-47, Method: Composition-based stats. Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 1/197 (0%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E+ + Q+H Y+ +Q++DGL I+DQHAA ER+ +E R+ Q L Sbjct: 502 ETPVQRFPQLEYFGQMHGTYLFAQSSDGLYIIDQHAAQERIKYEYFREKIGEVSDDLQEL 561 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P ++D + + E L G+ E FG N+ +R P ++R++I Sbjct: 562 LVPFVLDYPNSDALKLKEQKHLLEDAGVYLEEFGQNSFIVRAHPTWYPNGEEESIIREMI 621 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D ++ + + +++ E M+C SI++ + + LL+++ + N C HGR Sbjct: 622 DMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEAQARVLLKDLAQCENPFNCPHGR 680 Query: 578 PTFIKLKLSDIEKLFGR 594 P I SD+E++F R Sbjct: 681 PVLIHFTNSDMERMFKR 697 >gi|91781911|ref|YP_557117.1| DNA mismatch repair protein [Burkholderia xenovorans LB400] gi|91685865|gb|ABE29065.1| DNA mismatch repair protein MutL [Burkholderia xenovorans LB400] Length = 688 Score = 346 bits (887), Expect = 7e-93, Method: Composition-based stats. Identities = 122/355 (34%), Positives = 195/355 (54%), Gaps = 9/355 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 32 IQPLPDQLISQIAAGEVVERPASVVKELLENALDAGAQSLRILLDEGGVKRISITDDGCG 91 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ +A+ RH TSKI + + T GFRGEAL SI +V+ +T+ SR + Sbjct: 92 IPENELALALMRHATSKIRSLAELEAVATLGFRGEALASIASVAQMTITSRTADAAHAVR 151 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + + P A GT +EVR+L+F PAR FLKSEQ E + IRR A+A P Sbjct: 152 V---DAQTGVLSPAAGTQGTTIEVRELYFNTPARRKFLKSEQTELGHCLEQIRRAALARP 208 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E + + + G G+P Sbjct: 209 DVAISVLHNGKAVEHWNASEPP----VRVAKILGDTFATAHLPLDESAGPLAVYGCAGLP 264 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 265 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGERYPSYVLFLDLPPEAVDVNVH 324 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 P+K +RFR+ I F+ ++Q+A+ + ++ + + + Sbjct: 325 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHLAPSVSGPASF 379 Score = 211 bits (537), Expect = 3e-52, Method: Composition-based stats. Identities = 80/251 (31%), Positives = 124/251 (49%), Gaps = 2/251 (0%) Query: 344 SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 Q A L + T E L E R S + + + ++ Sbjct: 438 PVAQPLAFYDALFGRKDTNAGTAEGATLFEARDSAAEAPSPYNASAPYPAPAFHAAD--E 495 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 LG A QIH Y+++Q GLVIVD HAAHER+++E+ + I Q LL P+ + Sbjct: 496 QPLGFALGQIHGIYVLAQNAHGLVIVDMHAAHERILYEQFKNALADRTIAVQPLLIPQSM 555 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 E + E + L LG P +AIR +PA+L ++ L R ++ ++ Sbjct: 556 QADPVEIGTVEEERDTLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLSDLHAF 615 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRPT+ +L Sbjct: 616 GGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQL 675 Query: 584 KLSDIEKLFGR 594 LSD+++LF R Sbjct: 676 TLSDLDRLFMR 686 >gi|134280054|ref|ZP_01766765.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei 305] gi|134248061|gb|EBA48144.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei 305] Length = 681 Score = 345 bits (886), Expect = 9e-93, Method: Composition-based stats. Identities = 124/336 (36%), Positives = 197/336 (58%), Gaps = 9/336 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + Sbjct: 90 IPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEVFITSRTEDAAHATR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + V P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 150 I---DAQTGVVGPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E++ + + G G+P Sbjct: 207 DVAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 263 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 322 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 P+K +RFR+ I F+ ++Q+A+ + ++ Sbjct: 323 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET 358 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 108/196 (55%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 LG A QIH Y+++Q GLVIVD HAAHER+++E+ ++ I QTLL Sbjct: 484 PMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQTLL 543 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P + E E E L LG P +AIR +PA+L ++ L R ++ Sbjct: 544 IPVSMTATPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLA 603 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRP Sbjct: 604 DLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRP 663 Query: 579 TFIKLKLSDIEKLFGR 594 T+ +L L D++KLF R Sbjct: 664 TWYQLTLGDLDKLFMR 679 >gi|237813666|ref|YP_002898117.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei MSHR346] gi|237503721|gb|ACQ96039.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei MSHR346] Length = 681 Score = 345 bits (886), Expect = 1e-92, Method: Composition-based stats. Identities = 124/336 (36%), Positives = 197/336 (58%), Gaps = 9/336 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + Sbjct: 90 IPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDAAHATR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + V P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 150 I---DAQTGVVGPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E++ + + G G+P Sbjct: 207 DVAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 263 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 322 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 P+K +RFR+ I F+ ++Q+A+ + ++ Sbjct: 323 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET 358 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 108/196 (55%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 LG A QIH Y+++Q GLVIVD HAAHER+++E+ ++ I QTLL Sbjct: 484 PMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQTLL 543 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P + E E E L LG P +AIR +PA+L ++ L R ++ Sbjct: 544 IPVSMTATPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLA 603 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRP Sbjct: 604 DLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRP 663 Query: 579 TFIKLKLSDIEKLFGR 594 T+ +L L D++KLF R Sbjct: 664 TWYQLTLGDLDKLFMR 679 >gi|217420447|ref|ZP_03451952.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei 576] gi|217395859|gb|EEC35876.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei 576] Length = 681 Score = 345 bits (886), Expect = 1e-92, Method: Composition-based stats. Identities = 124/336 (36%), Positives = 197/336 (58%), Gaps = 9/336 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + Sbjct: 90 IPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDAAHATR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + V P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 150 I---DAQTGVVGPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E++ + + G G+P Sbjct: 207 DVAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 263 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 322 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 P+K +RFR+ I F+ ++Q+A+ + ++ Sbjct: 323 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET 358 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 108/196 (55%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 LG A QIH Y+++Q GLVIVD HAAHER+++E+ ++ I QTLL Sbjct: 484 PMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQTLL 543 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P + E E E L LG P +AIR +PA+L ++ L R ++ Sbjct: 544 IPVSMTATPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLA 603 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRP Sbjct: 604 DLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRP 663 Query: 579 TFIKLKLSDIEKLFGR 594 T+ +L L D++KLF R Sbjct: 664 TWYQLTLGDLDKLFMR 679 >gi|167904120|ref|ZP_02491325.1| DNA mismatch repair protein [Burkholderia pseudomallei NCTC 13177] Length = 684 Score = 345 bits (886), Expect = 1e-92, Method: Composition-based stats. Identities = 124/336 (36%), Positives = 197/336 (58%), Gaps = 9/336 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + Sbjct: 90 IPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDAAHATR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + V P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 150 I---DAQTGVVGPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E++ + + G G+P Sbjct: 207 DVAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 263 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 322 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 P+K +RFR+ I F+ ++Q+A+ + ++ Sbjct: 323 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET 358 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 108/196 (55%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 LG A QIH Y+++Q GLVIVD HAAHER+++E+ ++ I QTLL Sbjct: 487 PMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQTLL 546 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P + E E E L LG P +AIR +PA+L ++ L R ++ Sbjct: 547 IPVSMTATPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLA 606 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRP Sbjct: 607 DLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRP 666 Query: 579 TFIKLKLSDIEKLFGR 594 T+ +L L D++KLF R Sbjct: 667 TWYQLTLGDLDKLFMR 682 >gi|167721057|ref|ZP_02404293.1| DNA mismatch repair protein [Burkholderia pseudomallei DM98] gi|167912379|ref|ZP_02499470.1| DNA mismatch repair protein [Burkholderia pseudomallei 112] Length = 681 Score = 345 bits (886), Expect = 1e-92, Method: Composition-based stats. Identities = 124/336 (36%), Positives = 197/336 (58%), Gaps = 9/336 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + Sbjct: 90 IPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDAAHATR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + V P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 150 I---DAQTGVVGPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E++ + + G G+P Sbjct: 207 DVAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 263 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 322 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 P+K +RFR+ I F+ ++Q+A+ + ++ Sbjct: 323 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET 358 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 108/196 (55%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 LG A QIH Y+++Q GLVIVD HAAHER+++E+ ++ I QTLL Sbjct: 484 PMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQTLL 543 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P + E E E L LG P +AIR +PA+L ++ L R ++ Sbjct: 544 IPVSMTATPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLA 603 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRP Sbjct: 604 DLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRP 663 Query: 579 TFIKLKLSDIEKLFGR 594 T+ +L L D++KLF R Sbjct: 664 TWYQLTLGDLDKLFMR 679 >gi|126441610|ref|YP_001060275.1| DNA mismatch repair protein [Burkholderia pseudomallei 668] gi|126221103|gb|ABN84609.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei 668] Length = 681 Score = 345 bits (886), Expect = 1e-92, Method: Composition-based stats. Identities = 124/336 (36%), Positives = 197/336 (58%), Gaps = 9/336 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + Sbjct: 90 IPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDAAHATR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + V P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 150 I---DAQTGVVGPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E++ + + G G+P Sbjct: 207 DVAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 263 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 322 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 P+K +RFR+ I F+ ++Q+A+ + ++ Sbjct: 323 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET 358 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 108/196 (55%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 LG A QIH Y+++Q GLVIVD HAAHER+++E+ ++ I QTLL Sbjct: 484 PMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQTLL 543 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P + E E E L LG P +AIR +PA+L ++ L R ++ Sbjct: 544 IPVSMTATPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLA 603 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRP Sbjct: 604 DLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRP 663 Query: 579 TFIKLKLSDIEKLFGR 594 T+ +L L D++KLF R Sbjct: 664 TWYQLTLGDLDKLFMR 679 >gi|76810303|ref|YP_334679.1| DNA mismatch repair protein [Burkholderia pseudomallei 1710b] gi|254191608|ref|ZP_04898111.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei Pasteur 52237] gi|254261791|ref|ZP_04952845.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei 1710a] gi|76579756|gb|ABA49231.1| DNA mismatch repair protein [Burkholderia pseudomallei 1710b] gi|157939279|gb|EDO94949.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei Pasteur 52237] gi|254220480|gb|EET09864.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei 1710a] Length = 681 Score = 345 bits (886), Expect = 1e-92, Method: Composition-based stats. Identities = 124/336 (36%), Positives = 197/336 (58%), Gaps = 9/336 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + Sbjct: 90 IPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDAAHATR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + V P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 150 I---DAQTGVVGPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E++ + + G G+P Sbjct: 207 DVAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 263 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 322 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 P+K +RFR+ I F+ ++Q+A+ + ++ Sbjct: 323 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET 358 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 108/196 (55%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 LG A QIH Y+++Q GLVIVD HAAHER+++E+ ++ I QTLL Sbjct: 484 PMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQTLL 543 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P + E E E L LG P +AIR +PA+L ++ L R ++ Sbjct: 544 IPVSMTATPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLA 603 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRP Sbjct: 604 DLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRP 663 Query: 579 TFIKLKLSDIEKLFGR 594 T+ +L L D++KLF R Sbjct: 664 TWYQLTLGDLDKLFMR 679 >gi|254180773|ref|ZP_04887371.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei 1655] gi|184211312|gb|EDU08355.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei 1655] Length = 681 Score = 345 bits (886), Expect = 1e-92, Method: Composition-based stats. Identities = 124/336 (36%), Positives = 197/336 (58%), Gaps = 9/336 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + Sbjct: 90 IPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDAAHATR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + V P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 150 I---DAQTGVVGPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E++ + + G G+P Sbjct: 207 DVAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 263 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 322 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 P+K +RFR+ I F+ ++Q+A+ + ++ Sbjct: 323 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET 358 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 108/196 (55%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 LG A QIH Y+++Q GLVIVD HAAHER+++E+ ++ I QTLL Sbjct: 484 PMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQTLL 543 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P + E E E L LG P +AIR +PA+L ++ L R ++ Sbjct: 544 IPVSMTATPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLA 603 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRP Sbjct: 604 DLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRP 663 Query: 579 TFIKLKLSDIEKLFGR 594 T+ +L L D++KLF R Sbjct: 664 TWYQLTLGDLDKLFMR 679 >gi|53720423|ref|YP_109409.1| DNA mismatch repair protein [Burkholderia pseudomallei K96243] gi|53725794|ref|YP_103873.1| DNA mismatch repair protein [Burkholderia mallei ATCC 23344] gi|67642139|ref|ZP_00440900.1| DNA mismatch repair protein MutL [Burkholderia mallei GB8 horse 4] gi|121598418|ref|YP_991863.1| DNA mismatch repair protein [Burkholderia mallei SAVP1] gi|124383705|ref|YP_001027070.1| DNA mismatch repair protein [Burkholderia mallei NCTC 10229] gi|126451135|ref|YP_001081721.1| DNA mismatch repair protein [Burkholderia mallei NCTC 10247] gi|126454824|ref|YP_001067534.1| DNA mismatch repair protein [Burkholderia pseudomallei 1106a] gi|166998837|ref|ZP_02264689.1| DNA mismatch repair protein MutL [Burkholderia mallei PRL-20] gi|167740028|ref|ZP_02412802.1| DNA mismatch repair protein [Burkholderia pseudomallei 14] gi|167817246|ref|ZP_02448926.1| DNA mismatch repair protein [Burkholderia pseudomallei 91] gi|167895727|ref|ZP_02483129.1| DNA mismatch repair protein [Burkholderia pseudomallei 7894] gi|167920334|ref|ZP_02507425.1| DNA mismatch repair protein [Burkholderia pseudomallei BCC215] gi|226194259|ref|ZP_03789858.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei Pakistan 9] gi|242316948|ref|ZP_04815964.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei 1106b] gi|254178910|ref|ZP_04885564.1| DNA mismatch repair protein MutL [Burkholderia mallei ATCC 10399] gi|254202582|ref|ZP_04908945.1| DNA mismatch repair protein MutL [Burkholderia mallei FMH] gi|254207920|ref|ZP_04914270.1| DNA mismatch repair protein MutL [Burkholderia mallei JHU] gi|254299137|ref|ZP_04966587.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei 406e] gi|254355938|ref|ZP_04972216.1| DNA mismatch repair protein MutL [Burkholderia mallei 2002721280] gi|52210837|emb|CAH36824.1| putative DNA mismatch repair protein [Burkholderia pseudomallei K96243] gi|52429217|gb|AAU49810.1| mismatch repair protein MutL [Burkholderia mallei ATCC 23344] gi|121227228|gb|ABM49746.1| DNA mismatch repair protein MutL [Burkholderia mallei SAVP1] gi|124291725|gb|ABN00994.1| DNA mismatch repair protein MutL [Burkholderia mallei NCTC 10229] gi|126228466|gb|ABN92006.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei 1106a] gi|126244005|gb|ABO07098.1| DNA mismatch repair protein MutL [Burkholderia mallei NCTC 10247] gi|147746829|gb|EDK53906.1| DNA mismatch repair protein MutL [Burkholderia mallei FMH] gi|147751814|gb|EDK58881.1| DNA mismatch repair protein MutL [Burkholderia mallei JHU] gi|148024913|gb|EDK83091.1| DNA mismatch repair protein MutL [Burkholderia mallei 2002721280] gi|157809100|gb|EDO86270.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei 406e] gi|160694824|gb|EDP84832.1| DNA mismatch repair protein MutL [Burkholderia mallei ATCC 10399] gi|225933724|gb|EEH29712.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei Pakistan 9] gi|238523230|gb|EEP86670.1| DNA mismatch repair protein MutL [Burkholderia mallei GB8 horse 4] gi|242140187|gb|EES26589.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei 1106b] gi|243064923|gb|EES47109.1| DNA mismatch repair protein MutL [Burkholderia mallei PRL-20] Length = 684 Score = 345 bits (886), Expect = 1e-92, Method: Composition-based stats. Identities = 124/336 (36%), Positives = 197/336 (58%), Gaps = 9/336 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + Sbjct: 90 IPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDAAHATR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + V P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 150 I---DAQTGVVGPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E++ + + G G+P Sbjct: 207 DVAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 263 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 322 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 P+K +RFR+ I F+ ++Q+A+ + ++ Sbjct: 323 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET 358 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 108/196 (55%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 LG A QIH Y+++Q GLVIVD HAAHER+++E+ ++ I QTLL Sbjct: 487 PMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQTLL 546 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P + E E E L LG P +AIR +PA+L ++ L R ++ Sbjct: 547 IPVSMTATPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLA 606 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRP Sbjct: 607 DLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRP 666 Query: 579 TFIKLKLSDIEKLFGR 594 T+ +L L D++KLF R Sbjct: 667 TWYQLTLGDLDKLFMR 682 >gi|320103230|ref|YP_004178821.1| DNA mismatch repair protein MutL [Isosphaera pallida ATCC 43644] gi|319750512|gb|ADV62272.1| DNA mismatch repair protein MutL [Isosphaera pallida ATCC 43644] Length = 699 Score = 345 bits (886), Expect = 1e-92, Method: Composition-based stats. Identities = 129/410 (31%), Positives = 212/410 (51%), Gaps = 10/410 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+LS +INQIAAGE++ERP+ +KEL+EN++DA + R+E + GGK ++ DNG G Sbjct: 4 IRELSPSVINQIAAGEVVERPASVVKELLENAIDAGADRIEIAVERGGKDLIRVVDNGKG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++P+A + H TSK+ DD I T GFRGEAL +I +S + SR + TG + Sbjct: 64 IAPDDLPLAFRPHATSKLREADDLQRIATLGFRGEALAAIAEISKVCCESRTAEAETGFR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I G + +V P + GTI+EVR LFF P R FLKS+ E + +++ R+A+A+P Sbjct: 124 LRIDGGRAGAVEPCSCPVGTIMEVRHLFFNTPVRRTFLKSDATEAGHVAEMVTRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V FT + + + + +RI+ + G + + + + + L+G+ P Sbjct: 184 SVHFTSRSSGKVVFDLPATTC---LTDRIAALFGRELADQLIGVEHDVPGVGLRGFVSHP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + +R ++ Y+F+NGR V+D+ + + AY + +GRYPV L LE+ QVDVNVH Sbjct: 241 SHSRSSSKFQYLFLNGRYVRDRSLQHALAEAYRGLLMVGRYPVAFLNLEVPLDQVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +RFR +I + + +I++A K + AP P A+ Sbjct: 301 PTKIEVRFREAHLIYSALYSAIKQAFLKTDLHAKLQTRVTAFQVGSTSVAPALDWPTRAS 360 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC 410 F + + + + ++ V+ T G + Sbjct: 361 -----VSDWFSVPEEAAGSSVAAPAPCSSGSTSEAVDSLRPTRQAWGWSW 405 Score = 191 bits (485), Expect = 3e-46, Method: Composition-based stats. Identities = 64/183 (34%), Positives = 108/183 (59%) Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 Q H +Y++++T +GL+++DQHA HER++FE+ ++ + SQ LL PE ++L E A Sbjct: 516 QFHDSYLVAETPEGLMVIDQHALHERILFEEFKERLERGGVESQRLLIPETVELTPAEAA 575 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 + E + L +LGI+ FG + + + +PA L +L+RD+ D ++ T + Sbjct: 576 ALTERLDLLAKLGIELSGFGGSTVLVHALPAQLKHVEADRLVRDLADHLLQRPLPPTPEG 635 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 + ++L MAC +I++G+K+ E++ LL +S C HGRPT + L SD+EK Sbjct: 636 LMMDLLNMMACKAAIKAGQKLSPDEIDALLERRHLARDSHHCPHGRPTVLLLTKSDLEKQ 695 Query: 592 FGR 594 FGR Sbjct: 696 FGR 698 >gi|294614621|ref|ZP_06694525.1| DNA mismatch repair protein MutL [Enterococcus faecium E1636] gi|291592523|gb|EFF24128.1| DNA mismatch repair protein MutL [Enterococcus faecium E1636] Length = 702 Score = 345 bits (884), Expect = 2e-92, Method: Composition-based stats. Identities = 136/496 (27%), Positives = 237/496 (47%), Gaps = 19/496 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP +KEL+EN++DA S++++ ++ G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPVSVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A +RH TSKI DD I T GFRGEALPSI +VS +TL + + G Sbjct: 63 GILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMTLETANQEEKQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G ++ RP + GT + V +LFF PARL ++K+ E I D++ R+A+++ Sbjct: 123 YLSLKGGEVIEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + KM + NG+ + I+ + G +++ K + L GY + Sbjct: 183 PSIAFRLVHDGN---KMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRFIKNFSLNKAIVAGYGSKLMVGRFPIAVLEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-----------SVLSKKMISSFHQD 348 HP K +R + I +IQKA++++ + S K Sbjct: 300 HPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQPKTEQIEIDLS 359 Query: 349 NAPKTHLPKYATSLTNTQE--KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 A + PK +SL +E F++E + + D + E+ E T+ + Sbjct: 360 YAFEEEKPKKPSSLNFDRETGTFFVEEPKNTFVDRIVDKSVENVENYSGFSEENTTYPEK 419 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 + + + ++ EK ++ + + E + L Sbjct: 420 TAKTVDKFGENVDNFVEKTVEKSEKKEFPIVDNMEKTNEEQADKSVEEDEKIYEEELTLH 479 Query: 467 EGECALIMEHDEDLHR 482 +D+ L + Sbjct: 480 PE-FDFTQGNDKTLEQ 494 Score = 196 bits (499), Expect = 6e-48, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 1/197 (0%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + Q+H Y+ +Q++DGL I+DQHAA ER+ +E R+ Q L Sbjct: 502 EKPVQRFPQLEYFGQMHGTYLFAQSSDGLYIIDQHAAQERIKYEYFREKIGEVSDDLQEL 561 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P ++D + + E L GI E FG N+ +R P ++R++I Sbjct: 562 LVPFVLDYPNSDALKLKEQKHLLEDAGIYLEEFGQNSFIVRAHPTWYPNGEEESIIREMI 621 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D ++ + + +++ E M+C SI++ + + LL+++ + N C HGR Sbjct: 622 DMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEAQARVLLKDLARCENPFNCPHGR 680 Query: 578 PTFIKLKLSDIEKLFGR 594 P I SD+E++F R Sbjct: 681 PVLIHFTNSDMERMFKR 697 >gi|203284131|ref|YP_002221871.1| DNA mismatch repair protein [Borrelia duttonii Ly] gi|238690555|sp|B5RL36|MUTL_BORDL RecName: Full=DNA mismatch repair protein mutL gi|201083574|gb|ACH93165.1| DNA mismatch repair protein [Borrelia duttonii Ly] Length = 611 Score = 345 bits (884), Expect = 2e-92, Method: Composition-based stats. Identities = 151/619 (24%), Positives = 271/619 (43%), Gaps = 45/619 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L + ++ +IAAGE I+RP ++EL++N++D+ + ++E I GG ITDNG Sbjct: 3 KIKFLDKTLVQKIAAGEAIDRPCSILRELLDNAIDSGADKIEVFIEEGGIRRILITDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKI++ D I T GFRGEAL SI S+L + S N+ Sbjct: 63 GISKEDLKICYLPHTTSKINEEKDLERIQTLGFRGEALSSIAICSNLMITSSTTGENS-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI I + + GT+V+V +LF PAR FLK + +ET + V A+ + Sbjct: 122 QIEIENGIEKYFKKQSAINGTMVDVTNLFHNFPARKRFLKKDSIETKMCLKVFEEKAVTH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV-ELNEKSNEITLQGYTG 238 P + F S K + + +R+ V GE NN ++ + + + ++ + Sbjct: 182 PGIDFKLSVNKELKKVYF----KESLADRVQSVYGEIIENNKFGKIEAEYDHVKMKIFFA 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P F+R + +F+N R +++K + +I ++ + +PV L LEID VD N Sbjct: 238 PPNFSRKDRRNIKIFVNRRPIEEKSLSESIINGHSRILTYKNFPVCYLFLEIDTTHVDFN 297 Query: 299 VHPAKSYIRFRN----PTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 +HP K +RF N P I N I + + + +V+ K+ +++ P+ Sbjct: 298 IHPQKKEVRFFNLPFLPKQISNNINEFFDREKQEILQDYHNVIIKRQLTNDAHLLHPEND 357 Query: 355 L--PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC-- 410 L + T E L L + + + + D + + + I Sbjct: 358 LTNSNFKTYEITQDEALILDKPKNNKVTNIIEDKVKFEGQIPQKYKPSFKQHIQKIFIKT 417 Query: 411 -------------------AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 Q+ ++I + + + +DQHA HE++I++ + NS K Sbjct: 418 SKMPNNFQKSTQTNEFKYMGQLFSEFLIVENANEIYFIDQHALHEKIIYQTL---INSEK 474 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + L+ E E ++ E+ ++ I ++ + IP I +K Sbjct: 475 TIQKLLVPIEFQVECEDTDKILTSELEEYKKIDIIVKKIQNQTYRLESIPNICNKYE--- 531 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 +II + + + + + AT+AC +I+ + L+ E Sbjct: 532 ---NIIIQFFKTRKSKIIDSLETELYATLACRQAIKCNDTISLEFSQFLINEFFNLKL-K 587 Query: 572 QCNHGRPTFIKLKLSDIEK 590 C HGR + K+ ++EK Sbjct: 588 HCPHGRKIYHKITKFELEK 606 >gi|110669042|ref|YP_658853.1| DNA mismatch repair protein MutL [Haloquadratum walsbyi DSM 16790] gi|109626789|emb|CAJ53257.1| DNA mismatch repair protein MutL [Haloquadratum walsbyi DSM 16790] Length = 593 Score = 345 bits (884), Expect = 2e-92, Method: Composition-based stats. Identities = 158/623 (25%), Positives = 271/623 (43%), Gaps = 78/623 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +L +++I +AA E+I RP+ + ELIEN+LDA + R++ + G G + DNG Sbjct: 13 TICRLDDEMIAAVAAAEVITRPADVVAELIENALDAGADRIDISVTGDGTDQLVVRDNGQ 72 Query: 62 GMTSEEIPMAVQRHCTSKI-------------SDD--FSNIHTFGFRGEALPSIGAVSHL 106 GM+ ++ +AVQRH TSKI + D + T GFRGEAL SI V L Sbjct: 73 GMSKQDAILAVQRHTTSKINATKQAAGEITPTTQDGIIPPVETLGFRGEALASIATVGTL 132 Query: 107 TLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETN 166 + + G I +G SV P GT + V +LF +PAR L S Q E Sbjct: 133 EIETN-NGGPCGTMIKTNGPTAESVEPTGRACGTTITVNNLFEAVPARQEALASSQAEFA 191 Query: 167 LITDVIRRMAIAYPKVSFTFSTIKSNRYKM----NFQSTNGNFPERISQVIGEDFINNAV 222 I+ ++ A+ +P + + ++ + G + I+ + Sbjct: 192 RISKLVSHYALLHPMTAISLQHDGNDVLSTSGDGYTSALLGVYNREIAAQSTTIESTQTI 251 Query: 223 ELNEKSNEITLQ------GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 +++ KS++IT G PT R N N + I+GR V ++ +++ I Y++ + Sbjct: 252 DIDTKSSQITQTATIEINGVLVHPTVTRANRNAVSIAIDGRPVNNETLMAAIMNGYSDLL 311 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 P G++P+ + + + D NVHP K +R + +I + I S+ A++ Sbjct: 312 PGGQHPIAAVTVSLPGSLTDHNVHPRKQTVRIQTADLIADMIETSVSDALSTVDQRQIDT 371 Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 LS ++ S ++ S+ + +D Sbjct: 372 LSTELDVSLE----------------------ALTDADQTSSAAVADAD----------- 398 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 Q + Y++ D L+IVDQHAAHER+ +E++ + T + + Sbjct: 399 ------------VLGQFQELYLLCSLDDTLLIVDQHAAHERITYERLCATVDET-LPTVA 445 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP-----NAIAIREIPAILSKKNIPQ 511 + P + L G+ + + + L G + + AI + +PA L + P Sbjct: 446 IDPPVTVSLTPGQYSTLDCITDQLMTYGYEYTKRDDTQNTHKAINVHSVPAPLGQPAAPV 505 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 +RD ID + + T +R + LA +AC+ S+R+G + S + LL ++ N Sbjct: 506 SIRDAIDALQNDDTPSVAHER-TDTLAELACHQSLRAGEILDSPAADELLNQLGACENPY 564 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP + + D+ + FGR Sbjct: 565 ACPHGRPVVLTIDEMDLVRAFGR 587 >gi|291522252|emb|CBK80545.1| DNA mismatch repair protein MutL [Coprococcus catus GD/7] Length = 698 Score = 345 bits (884), Expect = 2e-92, Method: Composition-based stats. Identities = 124/359 (34%), Positives = 187/359 (52%), Gaps = 6/359 (1%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 MK I L IN+IAAGE++ERPS IKEL+EN++DA++S + I GG + ++TDN Sbjct: 1 MKSIHLLDSDTINKIAAGEVVERPSSVIKELVENAIDAKASAITIEIKEGGIAMMRVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++I A RH TSKI D + + GFRGEAL SI +VS + L+++ + Sbjct: 61 GGGIDRDDIKTAFVRHATSKIETAMDLMTVGSLGFRGEALSSIASVSQIELITKVHRELL 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G + S + GT + VR+LF+ PAR FLK+ E I D+ R+A+ Sbjct: 121 GVRYCIDGGEEKSCDDIGCPDGTTIIVRNLFYNTPARRKFLKTAATEAAYINDLAGRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P VSF F NR S NGN + I Q+ G D +E++ + + G+ Sbjct: 181 SHPDVSFKFINNNQNRLH---TSGNGNLRDIIYQIYGRDVTGQLLEVDVQGKLCHVTGFI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P +RGN + FINGR ++ I I AY + + +YP +E+DP +DV Sbjct: 238 GKPILSRGNRSWENYFINGRYIKSNIITKAIEDAYKTFVMIHKYPFTAFHIEVDPALIDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 NVHP K +RF + I I+ + + + S L + ++ + P Sbjct: 298 NVHPRKMELRFNQNEAVYQEIYDIIRAVLEHRELIPSISLEDQKKANGKEKEKESGPEP 356 Score = 196 bits (499), Expect = 8e-48, Method: Composition-based stats. Identities = 65/284 (22%), Positives = 120/284 (42%), Gaps = 26/284 (9%) Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 + + S+F ++ H + ++T + KL + NR ++ T Sbjct: 416 PYIAPTGQSGSAFVRETPTAYH---HKETMTQSTSKLQDENNRAVMSETTEEQKKTEVTL 472 Query: 393 NDPVEESEATHYQ----------------------LGIACAQIHQNYIISQTTDGLVIVD 430 ++ E++ H Q+ Y + + L I+D Sbjct: 473 SEAAEKAPKPHMPIVGEQMQLFGEDERLLDEKARARHRLIGQVFDTYWMVEYDGKLFIID 532 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAAHE++++EK+ + F+ + Q L P I+ L E + ++ + LG + E F Sbjct: 533 QHAAHEKVLYEKLMKAFSQKALQKQMLSPPVILTLSMQEENIYKQYADYFAELGFEIELF 592 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 G A+R +P L N + +++D + + S ++I ATMAC +++ Sbjct: 593 GGREYAVRGVPLQLFGMNARDIFIEVLDSVTEESRRLDGSAITDHI-ATMACKAAVKGNN 651 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 K+ E + L+ ++ + N C HGRPT I L ++EK F R Sbjct: 652 KLSFKEADTLIEQLLQAKNPYTCPHGRPTIISLSKYELEKKFKR 695 >gi|167580702|ref|ZP_02373576.1| DNA mismatch repair protein [Burkholderia thailandensis TXDOH] Length = 682 Score = 345 bits (884), Expect = 2e-92, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 199/347 (57%), Gaps = 9/347 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + + E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + + Sbjct: 90 IPAAELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDDAHATR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 150 I---DAQTGVLAPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E++ + + G G+P Sbjct: 207 DVAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 263 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 322 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 P+K +RFR+ I F+ ++Q+A+ + ++ + + Sbjct: 323 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHLSP 369 Score = 208 bits (530), Expect = 2e-51, Method: Composition-based stats. Identities = 72/198 (36%), Positives = 110/198 (55%) Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 + + LG A QIH Y+++Q GLVIVD HAAHER+++E+ ++ + QT Sbjct: 483 DPAMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTVAVQT 542 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 LL P + E E E L LG P +AIR +PA+L ++ L R + Sbjct: 543 LLIPVSMTATPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAV 602 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 + ++ + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHG Sbjct: 603 LADLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHG 662 Query: 577 RPTFIKLKLSDIEKLFGR 594 RPT+ +L L D++KLF R Sbjct: 663 RPTWYQLTLGDLDKLFMR 680 >gi|167847146|ref|ZP_02472654.1| DNA mismatch repair protein [Burkholderia pseudomallei B7210] gi|254194968|ref|ZP_04901398.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei S13] gi|169651717|gb|EDS84410.1| DNA mismatch repair protein MutL [Burkholderia pseudomallei S13] Length = 681 Score = 344 bits (883), Expect = 2e-92, Method: Composition-based stats. Identities = 123/336 (36%), Positives = 196/336 (58%), Gaps = 9/336 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG I D+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISIADDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + Sbjct: 90 IPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDAAHATR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + V P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 150 I---DAQTGVVGPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E++ + + G G+P Sbjct: 207 DVAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 263 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 322 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 P+K +RFR+ I F+ ++Q+A+ + ++ Sbjct: 323 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET 358 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 108/196 (55%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 LG A QIH Y+++Q GLVIVD HAAHER+++E+ ++ I QTLL Sbjct: 484 PMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQTLL 543 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P + E E E L LG P +AIR +PA+L ++ L R ++ Sbjct: 544 IPVSMTATPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLA 603 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRP Sbjct: 604 DLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRP 663 Query: 579 TFIKLKLSDIEKLFGR 594 T+ +L L D++KLF R Sbjct: 664 TWYQLTLGDLDKLFMR 679 >gi|261207075|ref|ZP_05921764.1| DNA mismatch repair protein [Enterococcus faecium TC 6] gi|289565923|ref|ZP_06446363.1| DNA mismatch repair protein mutL [Enterococcus faecium D344SRF] gi|260078703|gb|EEW66405.1| DNA mismatch repair protein [Enterococcus faecium TC 6] gi|289162296|gb|EFD10156.1| DNA mismatch repair protein mutL [Enterococcus faecium D344SRF] Length = 702 Score = 344 bits (883), Expect = 2e-92, Method: Composition-based stats. Identities = 136/496 (27%), Positives = 237/496 (47%), Gaps = 19/496 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP +KEL+EN++DA S++++ ++ G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPVSVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A +RH TSKI DD I T GFRGEALPSI +VS +TL + + G Sbjct: 63 GILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMTLETANQEEKQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +++ G ++ RP + GT + V +LFF PARL ++K+ E I D++ R+A+++ Sbjct: 123 YLSLKGGEVIEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + KM + NG+ + I+ + G +++ K + L GY + Sbjct: 183 PSIAFRLVHDGN---KMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRFIKNFSLNKAIVVGYGSKLMVGRFPIAVLEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-----------SVLSKKMISSFHQD 348 HP K +R + I +IQKA++++ + S K Sbjct: 300 HPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQPKTEQIEIDLS 359 Query: 349 NAPKTHLPKYATSLTNTQE--KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 A + PK +SL +E F++E + + D + E+ E T+ + Sbjct: 360 YAFEEEKPKKPSSLNFDRETGTFFVEEPKNTFVDRIVDKSVENVENYSGFSEENTTYPEK 419 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 + + + ++ EK ++ + + E + L Sbjct: 420 TAKTVDKFGENVDNFVEKTVEKSEKKEFPIVDNMEKTNEEQADKSVEEDEKIYEEELTLH 479 Query: 467 EGECALIMEHDEDLHR 482 +D+ L + Sbjct: 480 PE-FDFTQGNDKTLEQ 494 Score = 197 bits (500), Expect = 6e-48, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 1/197 (0%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + Q+H Y+ +Q++DGL I+DQHAA ER+ +E R+ Q L Sbjct: 502 EKPVQRFPQLEYFGQMHGTYLFAQSSDGLYIIDQHAAQERIKYEYFREKIGEVSDDLQEL 561 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P ++D + + E L GI E FG N+ +R P ++R++I Sbjct: 562 LVPFVLDYPNSDALKLKEQKHLLEDAGIYLEEFGQNSFIVRAHPTWYPNGEEESIIREMI 621 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D ++ + + +++ E M+C SI++ + + LL+++ + N C HGR Sbjct: 622 DMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEAQARVLLKDLARCENPFNCPHGR 680 Query: 578 PTFIKLKLSDIEKLFGR 594 P I SD+E++F R Sbjct: 681 PVLIHFTNSDMERMFKR 697 >gi|291542655|emb|CBL15765.1| DNA mismatch repair protein MutL [Ruminococcus bromii L2-63] Length = 705 Score = 344 bits (882), Expect = 3e-92, Method: Composition-based stats. Identities = 117/380 (30%), Positives = 195/380 (51%), Gaps = 6/380 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + IAAGE++ERP+ IKEL+ENS+DA + + I GG +F ++ D+G G Sbjct: 4 INVLDKHVAELIAAGEVVERPASVIKELVENSIDAGAKNITVEIKNGGTTFMRVADDGCG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++I +A RH TSK+ D +I T GFRGEAL SI AVS L L++R G Sbjct: 64 IYRDDIKVAFLRHATSKVKVESDLDSISTLGFRGEALASICAVSRLQLITRNVNEEIGTS 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + S GT +RDLF+ IPAR FLK + E N ++++I + A+++P Sbjct: 124 YEIDGGEEQSFDDAGCPVGTTFVIRDLFYNIPARAKFLKKDVSEGNAVSNIIDKTALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++FT+ ++ +G I V G+DF + ++ + + I + GY P Sbjct: 184 EIAFTYIKDGK---QVLRTFGDGKLISAIYSVFGKDFAKGLIPVDYQLDAIKVYGYISKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +R N N FINGR ++ + + + A+ +I +G++P VL +E+ +DVNVH Sbjct: 241 EHSRPNRNMQNFFINGRYIKTRTAMVALEEAFKGSIMVGKFPSCVLNIELPCEMIDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-NAPKTHLPKYA 359 P+K +RF N + + I +++ ++ K + K+ + Q+ P + P Sbjct: 301 PSKLEVRFINERPVFDAIYHAVKSSLMKYDSRKKASFKKETAFNEVQNKFNPFNNAPAIL 360 Query: 360 TSLTNTQEKLFLQENRLSTN 379 K + + + Sbjct: 361 NKPVVQSSKNDFVQKQYAKP 380 Score = 150 bits (379), Expect = 5e-34, Method: Composition-based stats. Identities = 55/291 (18%), Positives = 122/291 (41%), Gaps = 9/291 (3%) Query: 310 NPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKL 369 + I + + + + + ++ T P+ + +++ Sbjct: 417 DEAAILSVTKSIDDIKVADISNPFDVFSKQAINKAKEEEKLKSTFKPEILQPTSLVEDEK 476 Query: 370 FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG-----IACAQIHQNYIISQTTD 424 E+ + ++ + + +E+S+ + YII++ + Sbjct: 477 TDTESITDKSPIVSPKEVNVIVSEESIEKSKEPVLVNDNQTSIKYIGEAFDTYIIAEKNN 536 Query: 425 -GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 ++++D+HAAHER+I+EK++ + + Q LL P + L + E + + + Sbjct: 537 KDILLIDKHAAHERIIYEKLKAEKAAD--YRQILLAPVTVPLGKTEYDAAINNLDMFSDC 594 Query: 484 GIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY 543 G + E FG + + +R P + I + ++ I T ++++ + +AC Sbjct: 595 GFEVEDFGNSTVIVRSSPQYIPAVEIEDCITEM-SGYISQGKTDIFTEKMDWFYSNVACR 653 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +I++G K E+ +++ +E++P C HGRP I L +IEK FGR Sbjct: 654 SAIKAGNKSTPEELIGIVKHLEEHPEIKYCPHGRPICIVLTKGEIEKQFGR 704 >gi|73669014|ref|YP_305029.1| DNA mismatch repair protein MutL [Methanosarcina barkeri str. Fusaro] gi|72396176|gb|AAZ70449.1| DNA mismatch repair protein MutL [Methanosarcina barkeri str. Fusaro] Length = 692 Score = 344 bits (882), Expect = 3e-92, Method: Composition-based stats. Identities = 124/335 (37%), Positives = 197/335 (58%), Gaps = 5/335 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + IN+IAAGE+IERP+ +KELI+NS+DA ++ + + GGK + DNG Sbjct: 16 KIRLLDKDTINKIAAGEVIERPASVVKELIDNSIDAGATDIRIEVEKGGKRSILVRDNGC 75 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ +A ++H TSK++ +D + I T GFRGEAL SI AV+ + +++RPP+ TG Sbjct: 76 GMDREDALLAYKKHATSKLTRIEDLNTISTMGFRGEALSSITAVAKVEILTRPPEEITGT 135 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G K+ PGT V V+DLF+ IPAR +LKS++ E ITD + ++A+A Sbjct: 136 RIVIHGGKVLETSAAGTTPGTSVNVKDLFYNIPARQKYLKSDRTELAHITDTVMQLALAN 195 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SFT + + + + + + I ++G D + + L ++ + + GY Sbjct: 196 PHISFTLLSEEKPVIR---NAGSSESFKSIVNLLGPDTARSMLPLEYRTEDFEIFGYISK 252 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R ++Q ++F+N R V + I IR Y IP RYPV VL L ++P +VDVNV Sbjct: 253 PETTRRESDQIFLFVNTRPVTSRSINKAIREGYYTKIPKERYPVAVLSLIVNPGEVDVNV 312 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 HP K+ +RF + + + +I+K +++ ++ Sbjct: 313 HPRKAEVRFSREKELGDAVTSAIEKVLSENALAPE 347 Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 3/220 (1%) Query: 375 RLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAA 434 + ++ + + +++ ++ Q+ + YI+++ + LV++DQHAA Sbjct: 474 EKAGSEEQKFEGINAEKMQKSIQKPNTDSFENLRIIGQVSKLYILAERGEDLVLIDQHAA 533 Query: 435 HERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA 494 HER+++E++ + S Q L+TP IDL E L+ E+ L G FG N Sbjct: 534 HERILYEQVLKMKKSR---VQELITPVTIDLTPKEKVLMEEYIPYLEDFGFGISEFGDNT 590 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQS 554 + +P + + P+++ DI+ +++ S E I T+AC +I+ G Sbjct: 591 YVVTFVPEVFGRLEDPEVIHDIVSDLLASGKVKKDTGISEKICKTLACRAAIKGGAACSP 650 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +M L+ +++K N C HGRPT I +++++F R Sbjct: 651 RQMEELIEQLKKAENPYSCPHGRPTVITFTKGELDRMFAR 690 >gi|160880512|ref|YP_001559480.1| DNA mismatch repair protein MutL [Clostridium phytofermentans ISDg] gi|160429178|gb|ABX42741.1| DNA mismatch repair protein MutL [Clostridium phytofermentans ISDg] Length = 695 Score = 344 bits (882), Expect = 3e-92, Method: Composition-based stats. Identities = 133/405 (32%), Positives = 198/405 (48%), Gaps = 11/405 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + INQIAAGE++ERP+ +KELIEN++DA ++ V I GG SF +ITDNG Sbjct: 3 KIALLDQSTINQIAAGEVVERPASVVKELIENAIDAGATAVTAEIKDGGISFIRITDNGA 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++IP A RH TSKI +D I + GFRGEAL SI +V+ + L+++ TG Sbjct: 63 GIEKDDIPTAFLRHSTSKIQSIEDLLTIGSLGFRGEALSSIASVAQVELVTKTRTAFTGI 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G + S+ + GT VR+LFF PAR FLKS E + I+D++ R+A+++ Sbjct: 123 RYLIEGGEEQSMTEIGCPDGTTFIVRNLFFNTPARRKFLKSAMTEASYISDLMERLAVSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF F + N + I V G V + + I++ GY G Sbjct: 183 PDISFKFINNNK---TVLHTFGNSQLKDIIYHVYGRTIAAEVVTVENGNEHISISGYIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +RGN N FINGR ++ I I AY +YP + I+P +DVNV Sbjct: 240 PIISRGNRNYENYFINGRYIKSNIINKAIEEAYRPYSMQHKYPFTAIHFSINPEFIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RF N + + +I+ A+N + L S +++ K + Sbjct: 300 HPTKMEVRFHNFEELYQLTLNTIRDALNSTNMIPKVSL------SEEKESIKKEAVSAPE 353 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 N ++ R T D S S + ++ + Sbjct: 354 PFEENRRKLEKETRERSHTTDYQVSKGRNVSCNLTQIDPKKEIDP 398 Score = 193 bits (491), Expect = 6e-47, Method: Composition-based stats. Identities = 66/305 (21%), Positives = 120/305 (39%), Gaps = 10/305 (3%) Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 + P K T I ++Q + S ++ + ++ + Sbjct: 390 IDPKKEIDPAIKETEIGRLREVTLQGNLKNIEEQKLSEGDSSYRTAAEHASYMESTYAQN 449 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH---------YQLGIA 409 T T + +E S S + + + +E+ + Sbjct: 450 ETMNTPSISYDIEKETVTSNIAEEISQISLFPQKEEIIEKENLPKELSLLSEEGIRQARI 509 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q + Y + + L I+DQHAAHE++++E + + SQ L P I+ L E Sbjct: 510 IGQAFKTYWFIELENQLYIIDQHAAHEKVLYESTMKRLKEKETMSQQLCPPVILTLNLRE 569 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 I H E L LG + E FG A+ +PA + +LL + ID++++ + Sbjct: 570 EEAIKTHREFLSMLGFEIEPFGGKEYAVSAVPADMFGLAGERLLIEFIDDLVEE-ISRGT 628 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 D I +A+++C +++ + E N LL+++ N C HGRP I + ++E Sbjct: 629 PDVILEKIASLSCKAAVKGNYNLSVEEANELLKQLLTLENPFHCPHGRPIIISMTKYELE 688 Query: 590 KLFGR 594 K F R Sbjct: 689 KKFKR 693 >gi|167563963|ref|ZP_02356879.1| DNA mismatch repair protein [Burkholderia oklahomensis EO147] Length = 350 Score = 344 bits (882), Expect = 3e-92, Method: Composition-based stats. Identities = 127/330 (38%), Positives = 195/330 (59%), Gaps = 9/330 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ IKEL+EN+LDA +S + V+ GG ITD+G G Sbjct: 26 IQPLPDQLISQIAAGEVVERPASVIKELVENALDAGASTLRIVLDEGGVKRISITDDGCG 85 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + Sbjct: 86 IPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFVTSRTEDAAHAMR 145 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 146 I---DAQTGVLAPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 202 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++GE F + L+E + + + G G+P Sbjct: 203 DVAISVLHNGRAVEHWNASEPAA----RVAKILGEGFATAHLPLDESAGPLAVYGCAGLP 258 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 259 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 318 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 P+K +RFR+ I F+ ++Q+A+ + Sbjct: 319 PSKIEVRFRDSRSIHQFVFHAVQRALARHA 348 >gi|295675604|ref|YP_003604128.1| DNA mismatch repair protein MutL [Burkholderia sp. CCGE1002] gi|295435447|gb|ADG14617.1| DNA mismatch repair protein MutL [Burkholderia sp. CCGE1002] Length = 698 Score = 344 bits (882), Expect = 3e-92, Method: Composition-based stats. Identities = 122/348 (35%), Positives = 194/348 (55%), Gaps = 9/348 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 33 IQPLPDQLISQIAAGEVVERPASVVKELLENALDAGAQTLRILLDEGGVKRISITDDGCG 92 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ +A+ RH TSKI + + T GFRGEAL SI +V+ +++ SR + Sbjct: 93 IPENELVLALTRHATSKIRSLAELEAVATLGFRGEALASIASVAQMSITSRTADVPHAVR 152 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A GT +EVR+L+F PAR FLKSEQ E + IRR A+A P Sbjct: 153 I---DAETGVLSPAAGTQGTTIEVRELYFNTPARRKFLKSEQTELGHCLEQIRRAALARP 209 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E + + + G G+P Sbjct: 210 DVAISVLHNGKAVEHWNASEPPA----RVAKILGDTFATAHLPLDESAGPLAIYGCAGLP 265 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 266 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGERYPSYVLFLDLPPEGVDVNVH 325 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 P+K +RFR+ I F+ ++Q+A+ + ++ + + Sbjct: 326 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHLEPS 373 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 73/224 (32%), Positives = 118/224 (52%) Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 L+ ++ P D +++ LG A QIH Y+++Q GLVIVD Sbjct: 473 LEARDSASETTSPYDAASFASRPASPAFDATDDQPLGFALGQIHGIYVLAQNRHGLVIVD 532 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 HAAHER+++E+ + I Q LL P+ + E + E + L LG Sbjct: 533 MHAAHERILYEQFKNALADHAIAVQPLLIPQTMQADPVEIGTVEEERDTLGALGFDLAVL 592 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 P +AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ ++R+ R Sbjct: 593 SPTTLAIRAVPALLKDADLQALARAVLSDLHAFGGSRVLTERQHELLGTLACHHAVRANR 652 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ EMN LLR+ME + QCNHGRPT+ +L L+D+++LF R Sbjct: 653 RLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLADLDRLFMR 696 >gi|160933109|ref|ZP_02080498.1| hypothetical protein CLOLEP_01952 [Clostridium leptum DSM 753] gi|156868183|gb|EDO61555.1| hypothetical protein CLOLEP_01952 [Clostridium leptum DSM 753] Length = 747 Score = 343 bits (881), Expect = 3e-92, Method: Composition-based stats. Identities = 126/407 (30%), Positives = 202/407 (49%), Gaps = 10/407 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + + IAAGE++ERPS IKEL+ENS+DA ++ + I GG ++ ++TDNG Sbjct: 3 KIHVLEKHVAELIAAGEVVERPSSVIKELVENSIDAGATTISVEIQRGGIAYMRVTDNGG 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P A R+ TSK+ ++D I T GFRGEAL SI AVS +TL++R + G Sbjct: 63 GIAREDVPKAFLRNATSKVESAEDLDGIGTLGFRGEALASICAVSRVTLLTRTEEELAGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I G + ++ G + VRDLF+ PAR+ FLK + E N + V+ R A+++ Sbjct: 123 SYQIEGGEELALEDAGCAKGCTIVVRDLFYNTPARMKFLKKDVSEANAVAGVMDRAALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF F + + I V G+DF + ++ N I ++G+ Sbjct: 183 PEISFRFVRDHK---ETLSTPGDRQLRSCIYAVYGKDFTAGLIPVDYAYNGIKVRGFISK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ R N + + FINGR V+ K + + A+ +I G++P VL L + VDVNV Sbjct: 240 PSAARPNRSMQHFFINGRFVKSKTAMVALEQAFKGSIMAGKFPSCVLHLSVPWEAVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAI-----NKKGISTSSVLSKKMISSFHQDNAPKTH 354 HP+K +RF N I + + ++ A+ K+ I L A K Sbjct: 300 HPSKIEVRFLNEKPIFDAVYHGVKSALLSGDQRKEMILPRPKLDPPASQPEQIRLAAKPA 359 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA 401 + A + +L + + N L + + S + + + Sbjct: 360 IGSAAQETAEKEARLLTSQTEQAPNSSLGAYEKVVSSSAGRLAQPQQ 406 Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 131/289 (45%), Gaps = 6/289 (2%) Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 N I + + + IS+ S + AP + A + + + Sbjct: 460 ENEPEIYLPVKRQTAIPAVRDFISSPFSFSDEASKPKAAGEAPGDTGFEAAAADRGRKAE 519 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEES--EATHYQLGIACAQIHQNYIISQTTDG- 425 QE P + P EE+ + + + + Y+I + D Sbjct: 520 PKAQELSEEAAGEKPESSRQAAAAEPPREEAGLQPFGEKRQRLVGEAFRTYLIIEYGDDE 579 Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L+++D+HAAHER+++EK+++ S K +Q LL P + L + E A ++E+ + G Sbjct: 580 LLLIDKHAAHERILYEKLKK--ESGKSCAQYLLEPIPVTLDKNEYAAVLENQKLFWEAGF 637 Query: 486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 + E FG ++ +R P L +++I L +I ++++ T + ++++ + +AC + Sbjct: 638 EVEDFGGGSVLVRSAPLSLEQEDIASSLMEIAGHLLENKTDMS-TEKLDWLYHNIACRAA 696 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++G+ E+ L + +NP C HGRP I LK +IEK FGR Sbjct: 697 VKAGQITSDQELIALAVALRENPEIRYCPHGRPVSITLKKREIEKQFGR 745 >gi|209522327|ref|ZP_03270949.1| DNA mismatch repair protein MutL [Burkholderia sp. H160] gi|209497233|gb|EDZ97466.1| DNA mismatch repair protein MutL [Burkholderia sp. H160] Length = 398 Score = 343 bits (881), Expect = 3e-92, Method: Composition-based stats. Identities = 121/348 (34%), Positives = 194/348 (55%), Gaps = 9/348 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 56 IQPLPDQLISQIAAGEVVERPASVVKELLENALDAGARTLRILLDEGGVKRISITDDGCG 115 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ +A+ RH TSKI + + T GFRGEAL SI +V+ +++ SR + Sbjct: 116 IPENELVLALTRHATSKIRSLAELEAVATLGFRGEALASIASVAQMSITSRTADVPHAVR 175 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A GT +EVR+L+F PAR FLKSEQ E + IRR A+A P Sbjct: 176 I---DAETGVLSPAAGTQGTTIEVRELYFNTPARRKFLKSEQTELGHCLEQIRRAALARP 232 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E + + + G G+P Sbjct: 233 DVAISVLHNGKAVEHWNASEPPA----RVAKILGDTFATAHLPLDESAGPLAIYGCAGLP 288 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + R+P VL L++ P VDVNVH Sbjct: 289 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGERFPSYVLFLDLPPEGVDVNVH 348 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 P+K +RFR+ I F+ ++Q+A+ + ++ + + Sbjct: 349 PSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHLEPS 396 >gi|89897870|ref|YP_514980.1| DNA mismatch repair protein [Chlamydophila felis Fe/C-56] gi|123749556|sp|Q256F3|MUTL_CHLFF RecName: Full=DNA mismatch repair protein mutL gi|89331242|dbj|BAE80835.1| methyl-directed DNA mismatch repair protein [Chlamydophila felis Fe/C-56] Length = 580 Score = 343 bits (881), Expect = 4e-92, Method: Composition-based stats. Identities = 141/521 (27%), Positives = 253/521 (48%), Gaps = 16/521 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L INQIAAGE+IE +KEL+EN+LDA + +E GGG+ + DNG G Sbjct: 7 IQLLDTTTINQIAAGEVIENSISVVKELVENALDAGADEIEVETLGGGQGLIVVKDNGCG 66 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M++E++ +A++RH TSKI + D ++ +FGFRGEALP+I ++S + ++S P G++ Sbjct: 67 MSAEDVTLALKRHATSKIGEFSDIFSLSSFGFRGEALPAIASISKMEILSCPRIGE-GSR 125 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G +I + GT + + LF+ +P R F KS Q + + ++ ++ Sbjct: 126 TIIHGGEIIASEAKPRQLGTTISIDSLFYNVPVRRGFQKSPQADRIAMRKLLENRILSIE 185 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V +++ + + + + F ER+ V+GE F+ A+ ++ + ++G+ G P Sbjct: 186 GVGWSWVSERQQEFHILKHRG---FAERVGFVMGEGFMQEALRVDSGERPVCVRGFLGSP 242 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F+R + VFIN R V FI IR AY+ +P R+PV VL L + P D NVH Sbjct: 243 GFHRPTRSGQRVFINDRPVDSVFISKQIREAYSMLLPPQRHPVFVLKLYLPPEWCDFNVH 302 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K+ +R + F+ +SI + + + S +S+K I S HL + ++ Sbjct: 303 PQKTEVRILKEEFVGEFLSESIGEVLAR---PQESSVSEKTIFSLPALRFFDEHLAERSS 359 Query: 361 --SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 L + ++ L D ++ ++ + + + +I + Sbjct: 360 VEPLESISLPELSIPPKVPLPFLDKGQDIPTTDGQMQIDWGVSQEVRFLTSLGKI----V 415 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +++ ++G+ + AA + +F + SQ+ L P +++ E + H E Sbjct: 416 LAEDSEGVHAIFTEAA-RKHLFYLALTENQQYNYKSQSFLVPLCLEVTPQEGIFLSSHVE 474 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 D +LGI+ + GP AI P + ++ + + + E Sbjct: 475 DFKQLGIELSQMGPCIFAIDSAPTFIGEEELKSWILFLAAE 515 >gi|153814909|ref|ZP_01967577.1| hypothetical protein RUMTOR_01124 [Ruminococcus torques ATCC 27756] gi|145847940|gb|EDK24858.1| hypothetical protein RUMTOR_01124 [Ruminococcus torques ATCC 27756] Length = 705 Score = 343 bits (880), Expect = 4e-92, Method: Composition-based stats. Identities = 130/496 (26%), Positives = 231/496 (46%), Gaps = 16/496 (3%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I+ L + I++IAAGE+IERP+ +KEL+EN++DA+++ V I GG SF ++TDN Sbjct: 14 MPHIQVLDQITIDKIAAGEVIERPASIVKELVENAIDAKATSVTVEIKDGGISFIRVTDN 73 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++E+ A RH TSKI ++ +IH+ GFRGEAL SI AV+ ++++ + + Sbjct: 74 GCGIEADEVRCAFLRHSTSKIRTAEELVSIHSLGFRGEALSSIAAVTRTEVITKTEEGQS 133 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G K +++ GT + LF+ IPAR FLK+ E + D++ +A+ Sbjct: 134 GIKYVIEGGKETALEETGAPNGTTFLIHQLFYNIPARRKFLKTPVTEAGHVQDLLIHLAL 193 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P+VSF F + + S NG + I V G + +N +EL+ K + +++ G+ Sbjct: 194 SHPEVSFLFINNGQEKLR---TSGNGKLKDVIYNVYGREVTSNLLELDYKKDGLSISGFL 250 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P RGN N F+NGR V+ + ++ AY + ++P VL +++ +DV Sbjct: 251 GKPVITRGNRNFENFFVNGRYVKSAMLSKSLEDAYKDFTMQHKFPFAVLHFQVEGDLIDV 310 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RF+ + N + +++ + + + + ++ + ++ + +P PK Sbjct: 311 NVHPTKMELRFQRQQEVYNTMYEAVHRRLLEPELIQTATVPDPADAAQKKKESPFLLKPK 370 Query: 358 Y-ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 + + EK+ + + T E + E A Sbjct: 371 SIENTKYDPIEKIREKMQEREPEQVREKAQETKPEQVREKVQDEEQGQARKQTSAIEADK 430 Query: 417 YIISQTTDGLVIVDQ---------HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 + Q+ + D A HER ++ + Q E Sbjct: 431 ESVLQSEPQIHDEDYFIRKMRERVKAYHERSSSAEVLDRGEIYRPQQQAERIREAAAYRA 490 Query: 468 GECALIMEHDEDLHRL 483 E + + Sbjct: 491 KEADKTPKQMDLFEEN 506 Score = 202 bits (515), Expect = 1e-49, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 129/300 (43%), Gaps = 6/300 (2%) Query: 301 PAKSYIRFRNPTIIR-----NFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 P + + ++ + + I + + + + + + ++ Sbjct: 404 PEQVREKVQDEEQGQARKQTSAIEADKESVLQSEPQIHDEDYFIRKMRERVKAYHERSSS 463 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA-CAQIH 414 + + + + R + D T + + E + Q+ Sbjct: 464 AEVLDRGEIYRPQQQAERIREAAAYRAKEADKTPKQMDLFEENFLKREVKAEYTLIGQVF 523 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Y + Q D L I+DQHAAHER+++E+ ++ S + TSQ L P I+ L E L+ Sbjct: 524 DTYWLVQFQDSLYIIDQHAAHERVMYERTLKEMKSREYTSQYLSPPIILSLSMQEAQLLE 583 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 EH + R+G + E FG A+R +P L +LL ++ID++ D T D I+ Sbjct: 584 EHIDRFTRIGFEIEHFGGEEYAVRAVPDNLFGIAKKELLMEMIDDLADGINTSMTPDLID 643 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +A+M+C +++ ++ + E++ L+ E+ N C HGRPT I + ++EK F R Sbjct: 644 EKVASMSCKAAVKGNNRLSAKEVDALIGELLTLDNPYHCPHGRPTIIAMTKRELEKKFKR 703 >gi|313901992|ref|ZP_07835407.1| DNA mismatch repair protein MutL [Thermaerobacter subterraneus DSM 13965] gi|313467716|gb|EFR63215.1| DNA mismatch repair protein MutL [Thermaerobacter subterraneus DSM 13965] Length = 712 Score = 343 bits (880), Expect = 4e-92, Method: Composition-based stats. Identities = 127/386 (32%), Positives = 189/386 (48%), Gaps = 22/386 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L ++INQIAAGE++ERP+ +KEL+ENSLDA + R+ +A GG ++D+G Sbjct: 3 RIRRLDPQVINQIAAGEVVERPASVVKELVENSLDAGARRIRVDVAEGGLRSITVSDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +AV+RH TSKIS DD + T GFRGEAL ++ +V+ L L++RPP G Sbjct: 63 GMDPDDALLAVERHATSKISRLDDLARAGTLGFRGEALAAMASVARLELVTRPPAAEGGF 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G S P A PGT V VRDLFF PAR LK E I DV+ A+A Sbjct: 123 RVVVEGGAQRSAGPWASPPGTRVTVRDLFFNTPARRKHLKGPVAEFGRIADVVTAHALAR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + S +G+ + + G D + + + ++GY G Sbjct: 183 PDVRFELWHNGREVLR---TSGSGDPAVAVLECFGPDVATGLIPVAAAGDACRIEGYVGA 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + + IN R VQ + ++ AY +P RYPV VL L + +VDVNV Sbjct: 240 PRIARASRAWQFFSINRRPVQVPSLRFSLENAYRHLLPARRYPVAVLALTVPGEEVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +R + + + ++++ A+ + P P YA Sbjct: 300 HPAKLEVRLVRERAVASLLYRAVESALAE-----------------RDPLRPAAPGPFYA 342 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSD 385 S N E+ + + Sbjct: 343 PSPGNPGERFTPPKGPWGNGEGPWRP 368 Score = 150 bits (379), Expect = 5e-34, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 10/191 (5%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-KITSQTLLTPEIIDL 465 Q+ Y+ DGL +VDQHAAHER+ FE+ + +Q L P ++DL Sbjct: 515 LEPLGQVAGTYLACAGPDGLYVVDQHAAHERIYFERFLAQGAGQAGVPAQLLAVPVVLDL 574 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS-- 523 E AL++E + R+G + E FGP ++A+R +PA L+ + P LL D++ ++ Sbjct: 575 PASEYALLLEQAAAVARMGFQIEPFGPRSVAVRAVPAALADRPAPSLLADLLARLLAEAV 634 Query: 524 -STTYTLQ----DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 DR ILA AC +I++G ++ EM +LL ++ + C HGRP Sbjct: 635 RGGGEEAPVLDTDRAARILA--ACKAAIKAGDRLHPQEMAQLLADLARCRQPYACPHGRP 692 Query: 579 TFIKLKLSDIE 589 T I++ + ++E Sbjct: 693 TVIRVGVDELE 703 >gi|257887934|ref|ZP_05667587.1| DNA mismatch repair protein [Enterococcus faecium 1,141,733] gi|257823988|gb|EEV50920.1| DNA mismatch repair protein [Enterococcus faecium 1,141,733] Length = 702 Score = 343 bits (880), Expect = 4e-92, Method: Composition-based stats. Identities = 121/370 (32%), Positives = 204/370 (55%), Gaps = 7/370 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ ++ G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ A +RH TSKI DD I T GFRGEALPSI +VS + L + + G Sbjct: 63 GILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMILETANQEEKQGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G ++ RP + GT + V +LFF PARL ++K+ E I D++ R+A+++ Sbjct: 123 YLLLKGGEVMEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F + KM + NG+ + I+ + G +++ K + L GY + Sbjct: 183 PTIAFRLVHDGN---KMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ +L +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRFIKNFSLNKAIVAGYGSKLMVGRFPIAILEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I +IQKA++++ + S+ + + PKT + Sbjct: 300 HPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQ--PKTEQIEID 357 Query: 360 TSLTNTQEKL 369 S +EK Sbjct: 358 LSYAFEEEKP 367 Score = 197 bits (500), Expect = 5e-48, Method: Composition-based stats. Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 1/197 (0%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E+ + Q+H Y+ +Q++DGL I+DQHAA ER+ +E R+ Q L Sbjct: 502 ETPVQRFPQLEYFGQMHGTYLFAQSSDGLYIIDQHAAQERIKYEYFREKIGEVSDDLQEL 561 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P ++D + + E L GI E FG N+ +R P ++R++I Sbjct: 562 LVPFVLDYPNSDALKLKEQKHLLEDAGIYLEEFGQNSFIVRAHPTWYPNGEEESIIREMI 621 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D ++ + + +++ E M+C SI++ + + LL+++ + N C HGR Sbjct: 622 DMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEAQARVLLKDLAQCENPFNCPHGR 680 Query: 578 PTFIKLKLSDIEKLFGR 594 P I SD+E++F R Sbjct: 681 PVLIHFTNSDMERMFKR 697 >gi|317500421|ref|ZP_07958645.1| DNA mismatch repair protein MutL [Lachnospiraceae bacterium 8_1_57FAA] gi|331089572|ref|ZP_08338471.1| hypothetical protein HMPREF1025_02054 [Lachnospiraceae bacterium 3_1_46FAA] gi|316898176|gb|EFV20223.1| DNA mismatch repair protein MutL [Lachnospiraceae bacterium 8_1_57FAA] gi|330404940|gb|EGG84478.1| hypothetical protein HMPREF1025_02054 [Lachnospiraceae bacterium 3_1_46FAA] Length = 692 Score = 343 bits (880), Expect = 5e-92, Method: Composition-based stats. Identities = 130/496 (26%), Positives = 231/496 (46%), Gaps = 16/496 (3%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I+ L + I++IAAGE+IERP+ +KEL+EN++DA+++ V I GG SF ++TDN Sbjct: 1 MPHIQVLDQITIDKIAAGEVIERPASIVKELVENAIDAKATSVTVEIKDGGISFIRVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++E+ A RH TSKI ++ +IH+ GFRGEAL SI AV+ ++++ + + Sbjct: 61 GCGIEADEVRCAFLRHSTSKIRTAEELVSIHSLGFRGEALSSIAAVTRTEVITKTEEGQS 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G K +++ GT + LF+ IPAR FLK+ E + D++ +A+ Sbjct: 121 GIKYVIEGGKETALEETGAPNGTTFLIHQLFYNIPARRKFLKTPVTEAGHVQDLLIHLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P+VSF F + + S NG + I V G + +N +EL+ K + +++ G+ Sbjct: 181 SHPEVSFLFINNGQEKLR---TSGNGKLKDVIYNVYGREVTSNLLELDYKKDGLSISGFL 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P RGN N F+NGR V+ + ++ AY + ++P VL +++ +DV Sbjct: 238 GKPVITRGNRNFENFFVNGRYVKSAMLSKSLEDAYKDFTMQHKFPFAVLHFQVEGDLIDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RF+ + N + +++ + + + + ++ + ++ + +P PK Sbjct: 298 NVHPTKMELRFQRQQEVYNTMYEAVHRRLLEPELIQTATVPDPADAAQKKKESPFLLKPK 357 Query: 358 Y-ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 + + EK+ + + T E + E A Sbjct: 358 SIENTKYDPIEKIREKMQEREPEQVREKAQETKPEQVREKVQDEEQGQARKQTSAIEADK 417 Query: 417 YIISQTTDGLVIVDQ---------HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 + Q+ + D A HER ++ + Q E Sbjct: 418 ESVLQSEPQIHDEDYFIRKMRERVKAYHERSSSAEVLDRGEIYRPQQQAERIREAAAYRA 477 Query: 468 GECALIMEHDEDLHRL 483 E + + Sbjct: 478 KEADKTPKQMDLFEEN 493 Score = 202 bits (515), Expect = 1e-49, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 129/300 (43%), Gaps = 6/300 (2%) Query: 301 PAKSYIRFRNPTIIR-----NFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 P + + ++ + + I + + + + + + ++ Sbjct: 391 PEQVREKVQDEEQGQARKQTSAIEADKESVLQSEPQIHDEDYFIRKMRERVKAYHERSSS 450 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA-CAQIH 414 + + + + R + D T + + E + Q+ Sbjct: 451 AEVLDRGEIYRPQQQAERIREAAAYRAKEADKTPKQMDLFEENFLKREVKAEYTLIGQVF 510 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Y + Q D L I+DQHAAHER+++E+ ++ S + TSQ L P I+ L E L+ Sbjct: 511 DTYWLVQFQDSLYIIDQHAAHERVMYERTLKEMKSREYTSQYLSPPIILSLSMQEAQLLE 570 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 EH + R+G + E FG A+R +P L +LL ++ID++ D T D I+ Sbjct: 571 EHIDRFTRIGFEIEHFGGEEYAVRAVPDNLFGIAKKELLMEMIDDLADGINTSMTPDLID 630 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +A+M+C +++ ++ + E++ L+ E+ N C HGRPT I + ++EK F R Sbjct: 631 EKVASMSCKAAVKGNNRLSAKEVDALIGELLTLDNPYHCPHGRPTIIAMTKRELEKKFKR 690 >gi|226312962|ref|YP_002772856.1| DNA mismatch repair protein MutL [Brevibacillus brevis NBRC 100599] gi|226095910|dbj|BAH44352.1| DNA mismatch repair protein MutL [Brevibacillus brevis NBRC 100599] Length = 690 Score = 343 bits (879), Expect = 6e-92, Method: Composition-based stats. Identities = 127/380 (33%), Positives = 193/380 (50%), Gaps = 7/380 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L E++ N IAAGE++ERP+ +KEL+ENS+DA ++ +E + GG +I DNG Sbjct: 3 TIQVLDEQLANMIAAGEVVERPASVVKELVENSIDARATTIEIHVEEGGLEMIRIVDNGR 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ +A +RH TSKIS+ D I T GFRGEALPSI AVS + L S + G Sbjct: 63 GMDREDCQLAFERHATSKISNARDLFRIRTLGFRGEALPSIAAVSRMELTSSTSSSEVGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G ++ ++ A GT V VR LFF PARL ++KS E I+D + R+A+ + Sbjct: 123 HLLIEGGQLGTISDKAAVKGTEVCVRSLFFNTPARLKYMKSIATEVGHISDYVNRLALTH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF + + S +G ++ + G + + ++ + G+ Sbjct: 183 PSISFLLTHNGK---TLLQTSGDGKLLHVMAAIYGVQVAKLLLPIAGETLDYKWSGFLSK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R N + +NGR V+ I + I Y +P+GRYP+V L +E+DP VDVNV Sbjct: 240 TEVTRANRSYLSTLVNGRYVRSYSINNAIMRGYHTLLPIGRYPIVALQIEMDPSLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK RF + + I QS+++ + + ++++ Q P+ L Sbjct: 300 HPAKLEARFSKEDELCSAIEQSVKETLRQGLGIVRPMVTQPKAKVVTQVVQPQFDL--QI 357 Query: 360 TSLTNTQEKLFLQENRLSTN 379 T Q L RL Sbjct: 358 TKPDTPQSPLLAASPRLQEW 377 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 59/273 (21%), Positives = 109/273 (39%), Gaps = 5/273 (1%) Query: 327 NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFL---QENRLSTNDLLP 383 K ++ ++ A + + PK L Q E + + Sbjct: 416 AKVEAIPHEIVKATLLDQTDTREAFQPNEPKIPVQLDIAQAPSPAYPIHEISSEDHSAIA 475 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + T E + + Q+H YI++Q +G+ ++DQHAA ER+ +E Sbjct: 476 GTEQTPPLVEATNENETDSPVPVMYPVGQVHGTYIVAQNDEGMYLIDQHAAQERIFYEYF 535 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 I+SQ +L P ++ E + + + L G++ E FG +R P Sbjct: 536 MDKLAEEDISSQIMLFPHTVEYTAAEASKLEKRLSLLQSFGLEIEAFGGRTFIVRAHPHW 595 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTY--TLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 + +++ ++I ++++ + E M+C SI++ R + EM LL Sbjct: 596 FPEGAELEVIEELIQFVLETGENTQANVVLMREKAAIMMSCKASIKANRFLTHAEMESLL 655 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ K + C HGRP I D+EK+F R Sbjct: 656 NQLRKTSSPYTCPHGRPIVIHFTSYDLEKMFKR 688 >gi|257870588|ref|ZP_05650241.1| DNA mismatch repair protein [Enterococcus gallinarum EG2] gi|257804752|gb|EEV33574.1| DNA mismatch repair protein [Enterococcus gallinarum EG2] Length = 710 Score = 343 bits (879), Expect = 7e-92, Method: Composition-based stats. Identities = 126/399 (31%), Positives = 211/399 (52%), Gaps = 6/399 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ I G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I T GFRGEALPSI +VS LT+ + + G+ Sbjct: 63 GIAEEDVVTAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSILTIETAVKDASQGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + P + GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 FLRLKGGTVEEHIPANLRQGTKITVENLFYNTPARLKYVKTLQTELANIGDIVNRIALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F + KM + +G+ + I+ + G + + +N + + L GY + Sbjct: 183 PEVAFRLVHEGN---KMLTTTGSGDLKQTIAGIYGVETAKKMLAINSEDLDFKLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL + +DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIRNFALNKAIVAGYGSKLMVGRFPIAVLEITMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I +SI ++ ++ + ++ + + + +T L Sbjct: 300 HPTKQEVRLSKEEELTKLISKSINDSLREENLIPNAADNLRFKKKVTTEPVEQTKL-DLG 358 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 TS T + F +E + +PVEE Sbjct: 359 TSPTTSSGLTFNRETGKFQVASSGYQQTVDNFVENPVEE 397 Score = 200 bits (509), Expect = 6e-49, Method: Composition-based stats. Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 5/251 (1%) Query: 348 DNAPKTHLPKYATSLTNTQE--KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA--TH 403 + + P + +Q+ L ++ + + L + Y++ D + E Sbjct: 449 EIVQEVDQPAASVLEDASQQDLSLIEEQAQERLHPELHAGQKNYTKYVDRLLEETPAKQR 508 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 + Q+H Y+ +Q+ +GL IVDQHAA ER+ +E R+ Q LL P ++ Sbjct: 509 FPHLEYFGQMHGTYLFAQSDEGLYIVDQHAAQERIKYEYFREKIGEVSDDLQELLVPIVL 568 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 D + + E + L +GI E FG N+ +R P ++R++ID ++++ Sbjct: 569 DYPNNDAIKLKEQTKKLQEVGIHLEEFGANSFIVRAHPTWYPAGEEESIIREMIDMLLET 628 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + +++ E M+C SI++ + + LL ++ K N C HGRP I Sbjct: 629 G-SVSVKKFREATAIMMSCKRSIKANHYLNEAQARILLADLAKCENPFNCPHGRPVLIHF 687 Query: 584 KLSDIEKLFGR 594 SD+E++F R Sbjct: 688 TNSDMERMFKR 698 >gi|7328294|emb|CAB82461.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus COL] Length = 468 Score = 342 bits (878), Expect = 7e-92, Method: Composition-based stats. Identities = 113/381 (29%), Positives = 196/381 (51%), Gaps = 7/381 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-KMISSFHQDNAPKTHLPKY 358 HP K +R + I+ IQ+A + + + L + + + Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLHSFEQQKIEFEQ 358 Query: 359 ATSLTNTQEKLFLQENRLSTN 379 + N QEK F E S Sbjct: 359 RQNTENNQEKTFSSEESNSKP 379 >gi|332298473|ref|YP_004440395.1| DNA mismatch repair protein mutL [Treponema brennaborense DSM 12168] gi|332181576|gb|AEE17264.1| DNA mismatch repair protein mutL [Treponema brennaborense DSM 12168] Length = 681 Score = 342 bits (878), Expect = 8e-92, Method: Composition-based stats. Identities = 141/681 (20%), Positives = 250/681 (36%), Gaps = 107/681 (15%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +R L ++ +IAAGE+I+RP+ ++EL++N++D+ + + T I GGG ++ DNG Sbjct: 7 PVRTLPPEVARKIAAGEVIDRPNAIVRELLDNAVDSGADSIVTEITGGGIDCIRVADNGS 66 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E++ + H TSKI+ D N+ T GFRGEAL SI AVS L + S + Sbjct: 67 GMTKEDLENCARPHATSKITSETDLMNLSTLGFRGEALSSIAAVSRLRITSACEGS--AW 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ S + + P + GT+V+ LF PAR FLK E + A+ Sbjct: 125 RLEASVVRDHLITPADLPRGTVVQSEALFENFPARRMFLKRPAAEALMCRQTFVEKALPR 184 Query: 180 PKVSFTFSTIKSNRYKMN---------------------FQSTNGNFPERISQVIGEDFI 218 +SF F + + F +G+ + Sbjct: 185 TDISFHFVQDGKRKLDLPKGQTLAERFTAALDLPESPALFYELHGSAALSAAGDAPNAAD 244 Query: 219 NNAVELNE--------------KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFI 264 N+A+ + + + G P +R + ++++NGR + + + Sbjct: 245 NSALPSDSVPNREDDAPSRTDGRRCDWKFTIIIGEPAVSRQDKKLLFIYVNGRRINEYSL 304 Query: 265 LSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQK 324 + I P G +P L LE+DP VD N+HPAK RF++ + + +++ Sbjct: 305 MQAIEYGAQGYFPNGTHPAAALFLEMDPALVDFNIHPAKREARFKDIAPVHRAVSATVRD 364 Query: 325 AINKKGI-------------------STSSVLSKKMISSFH------------QDNAPK- 352 + +V + + +F D AP+ Sbjct: 365 FFRSHTVAHLAAQTASYCRIQPELEARPETVPADGSVKNFSAASAAAENAAPAADFAPQY 424 Query: 353 -THLPKYATSLTNTQEKLFLQ------ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 H A S + + F + E R S D + + E Sbjct: 425 GAHSGDAAPSGASDNRRRFFRDSFGELEVRQSEPAYALPGDGSAATYGTASHEPSCELPH 484 Query: 406 LG------------------IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 G ++ ++ L ++DQHAAHER+++ Sbjct: 485 DGTVHGAAAGFGHDTAAAGVRYIGTALGVFLAAEKDGNLYLIDQHAAHERILYNAFIAQA 544 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + + E + E L R G +A G +P Sbjct: 545 GRKQALLVPYVVE---TADAREDEYLHSIGEQLDRAGFEAADCGGGRWEFSAVPIQWKGT 601 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 RD+ +++ + I ++ AT +C +++ G + + RL + Sbjct: 602 E-----RDLAADLLAERIAPA--ELIASLAATSSCRAAVKDGDVLDADSAQRLAEQALAL 654 Query: 568 PNSSQCNHGRPTFIKLKLSDI 588 + C HGRP + K+ ++ Sbjct: 655 SDP-HCPHGRPLWKKISREEL 674 >gi|89894335|ref|YP_517822.1| hypothetical protein DSY1589 [Desulfitobacterium hafniense Y51] gi|89333783|dbj|BAE83378.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 733 Score = 342 bits (878), Expect = 9e-92, Method: Composition-based stats. Identities = 134/394 (34%), Positives = 195/394 (49%), Gaps = 12/394 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + NQIAAGE++ERP +KELIEN+LDA+++++E +I G G ++ DNG Sbjct: 4 KIHILDSQAANQIAAGEVVERPVSVVKELIENALDAQATQIEVIIEGSGVERIRVQDNGQ 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+++ ++P+ V RH TSKI DD + + T GFRGEALPSI +VS L ++SRPP+ +G Sbjct: 64 GISAADLPLTVLRHATSKIRSIDDLNRLRTLGFRGEALPSIASVSRLEIISRPPEEISGR 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G + PGT + V DLF+ PAR FLKS+ E I+DVI R+++A Sbjct: 124 VLRIQGGEQREFSETGCPPGTTITVDDLFYNTPARRKFLKSKNTEFGQISDVIGRLSLAR 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT + + GN E I V+G+ + L+ + L+GY Sbjct: 184 PDVSFTLKH---PKVLVLQTPGKGNLLESIGAVLGQATARRLLPLSCSQGDWRLEGYISP 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + +N R ++ I I Y IP YP+ +L L I P + DVNV Sbjct: 241 PDLVRSTKQGETLIVNERIIRSNSISRAISEGYHTLIPAKLYPITILKLHIPPHEYDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K IRF + FI + +++ + + V K S PK LP Sbjct: 301 HPTKMEIRFHKEKELMEFIAEGVRRTLLQARPIAPFVKVKNTPS-------PKESLPSAD 353 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 + Q L + + Y + Sbjct: 354 KADRPVQAALNFAPKSPHSPSQGKTIPIPYKHSS 387 Score = 194 bits (492), Expect = 4e-47, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 105/223 (47%) Query: 372 QENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 E LS + + E E + Q+ YI++ + LVI DQ Sbjct: 510 AELELSVAEENHEINEITEITEITDEIKEQSPLLALRPIGQVFNTYIMATDGEQLVIFDQ 569 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 HAAHER+ +E++ + + SQ LL P ++ GE ++EH L+ +G E FG Sbjct: 570 HAAHERINYERLLAEHQNNPGNSQMLLIPLTMEFTPGEEEALLEHFLLLNEMGFILEHFG 629 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRK 551 +R IPA QLLRD +D+++ + T+ +E + +AC SI++ Sbjct: 630 TRTYLLRGIPAYSGPYQGEQLLRDFLDQVMLNHIPPTMDKLLEEWIYMLACKASIKAKEN 689 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + EM +L+ ++ K N C HGRPT I+L ++E F R Sbjct: 690 LTLFEMEQLIVQLSKTLNPYTCPHGRPTMIQLTKEELEHRFYR 732 >gi|167571111|ref|ZP_02363985.1| DNA mismatch repair protein [Burkholderia oklahomensis C6786] Length = 344 Score = 342 bits (877), Expect = 1e-91, Method: Composition-based stats. Identities = 127/326 (38%), Positives = 194/326 (59%), Gaps = 9/326 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ IKEL+EN+LDA +S + V+ GG ITD+G G Sbjct: 26 IQPLPDQLISQIAAGEVVERPASVIKELVENALDAGASTLRIVLDEGGVKRISITDDGCG 85 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + Sbjct: 86 IPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFVTSRTEDAAHAMR 145 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + + P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 146 I---DAQTGVLAPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 202 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++GE F + L+E + + + G G+P Sbjct: 203 DVAISVLHNGRAVEHWNASEPAA----RVAKILGEGFATAHLPLDESAGPLAVYGCAGLP 258 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 259 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 318 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAI 326 P+K +RFR+ I F+ ++Q+A+ Sbjct: 319 PSKIEVRFRDSRSIHQFVFHAVQRAL 344 >gi|256750829|ref|ZP_05491714.1| DNA mismatch repair protein MutL [Thermoanaerobacter ethanolicus CCSD1] gi|256750412|gb|EEU63431.1| DNA mismatch repair protein MutL [Thermoanaerobacter ethanolicus CCSD1] Length = 384 Score = 342 bits (877), Expect = 1e-91, Method: Composition-based stats. Identities = 131/370 (35%), Positives = 207/370 (55%), Gaps = 6/370 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L EK IN+I+AGE++ERP+ +KELIENS+DA S + I GG + +++D+G Sbjct: 3 KIHLLDEKTINKISAGEVVERPASIVKELIENSIDAGSKNITVEILEGGIPYIKVSDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + +A +RH TSKI D +I T GFRGEAL SI AVSH+TL ++ G Sbjct: 63 GMNEIDAILAFERHATSKIKSDNDLYSIGTLGFRGEALASIAAVSHVTLQTKEEGALFGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G K+ G +EVRD+FF PAR FLK E+ ITDV+ ++ +++ Sbjct: 123 KVVVEGGKVVEKTTCGCAKGCSIEVRDVFFNTPARRKFLKRPSTESMYITDVVTKLCLSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + ++ S NGN + I ++ G + ++ + + +S ++ L+ G Sbjct: 183 PEVSFKYVKDRKLQF---ITSGNGNIEDVILRLFGNEVYSSLMSASFESEDLKLKILAGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N N N + ++NGR V++K + + + A+ IP+ RYP V L +EIDPRQ+DVN+ Sbjct: 240 NSLNYSNRNMQFFYVNGRYVKNKTLSAAVDEAFKTYIPVNRYPAVFLYMEIDPRQIDVNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-SVLSKKMISSFHQDNAPKTHLPKY 358 HP+K I+F + I + ++I+ +++K + + KK I Y Sbjct: 300 HPSKLEIKFSDERRIFEAVYKTIKDSLHKYNLIPEVKIEEKKNIFEIETPTISAEQTKLY 359 Query: 359 ATSLTNTQEK 368 TS EK Sbjct: 360 FTSSDKEVEK 369 >gi|258545148|ref|ZP_05705382.1| DNA mismatch repair protein MutL [Cardiobacterium hominis ATCC 15826] gi|258519619|gb|EEV88478.1| DNA mismatch repair protein MutL [Cardiobacterium hominis ATCC 15826] Length = 310 Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats. Identities = 118/314 (37%), Positives = 186/314 (59%), Gaps = 8/314 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++L +INQIAAGE+IERP+ +KE+IEN++DA +++++ I GG ++ DNG Sbjct: 3 RIQQLPNSLINQIAAGEVIERPASVVKEIIENAIDAGATQIDIDIEDGGGKLIRVRDNGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A H TSKI DD +I T GFRGEALPSI +VS TL SR ++ Sbjct: 63 GIHPDDLALAFATHATSKIRNLDDLEHITTLGFRGEALPSIASVSKTTLTSRAEGESSAW 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I+ ++ P A PGT +E+RDLF+ PAR FLKSE+ E I +++ +A+++ Sbjct: 123 RISPHLGD--AISPAAHPPGTTIEIRDLFYNTPARKKFLKSERTERQHIQQLVQNLALSH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++ + RI+ V+G+D + A+ ++ ++ ++ L G+ G+ Sbjct: 181 DGITIRLNNHGKPLGVY----GGEGLAARIASVLGDDLLEQALPIDARAADMHLYGWVGL 236 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT + Y +INGR ++DK I IR AY + + GR+PV VL L+I P +DVN Sbjct: 237 PTSATNQPERQYFYINGRIIRDKIIAHAIRQAYQDMLYHGRHPVYVLYLDIAPEHIDVNA 296 Query: 300 HPAKSYIRFRNPTI 313 HPAK +RFR + Sbjct: 297 HPAKHEVRFRESRL 310 >gi|203287669|ref|YP_002222684.1| DNA mismatch repair protein [Borrelia recurrentis A1] gi|238690586|sp|B5RR29|MUTL_BORRA RecName: Full=DNA mismatch repair protein mutL gi|201084889|gb|ACH94463.1| DNA mismatch repair protein [Borrelia recurrentis A1] Length = 611 Score = 341 bits (875), Expect = 2e-91, Method: Composition-based stats. Identities = 151/619 (24%), Positives = 271/619 (43%), Gaps = 45/619 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L + ++ +IAAGE I+RP ++EL++N++D+ + ++E I GG ITDNG Sbjct: 3 KIKFLDKTLVQKIAAGEAIDRPCSILRELLDNAIDSGADKIEVFIEEGGIRRILITDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + H TSKI++ D I T GFRGEAL SI S+L + S N+ Sbjct: 63 GISKEDLKICYLPHTTSKINEEKDLERIQTLGFRGEALSSIAICSNLMITSSITGENS-Y 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI I + + GT+V+V +LF PAR FLK + +ET + V A+ + Sbjct: 122 QIEIENGIEKYFKKQSAINGTMVDVTNLFHNFPARKRFLKKDSIETKMCLKVFEEKAVTH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV-ELNEKSNEITLQGYTG 238 P + F S K + + +R+ V GE NN ++ + + + ++ + Sbjct: 182 PGIDFKLSVNKELKKVYF----KESLADRVQSVYGEIIENNKFGKIEAEYDHVKMKIFFT 237 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P F+R + +F+N R +++K + +I ++ + +PV L LEID VD N Sbjct: 238 PPNFSRKDRRNIKIFVNRRPIEEKSLSESIINGHSRILTYKNFPVCYLFLEIDTTHVDFN 297 Query: 299 VHPAKSYIRFRN----PTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 +HP K +RF N P I N I + + + +V+ K+ +++ P+ Sbjct: 298 IHPQKKEVRFFNLPFLPKQISNNINEFFDREKQEILQDYHNVIIKRQLTNDAHLLHPEND 357 Query: 355 L--PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC-- 410 L + T E L L + + + + D + + + I Sbjct: 358 LTNSNFKTYEITQDEDLILDKPKNNKVTNIIEDKVKFEGQISQKYKPSFKQHIQKIFIKT 417 Query: 411 -------------------AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 Q+ ++I + + + +DQHA HE++I++ + NS K Sbjct: 418 SKMPNNFQKSTQTNEFKYMGQLFSEFLIVENANEIYFIDQHALHEKIIYQTL---INSEK 474 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + L+ E E ++ E+ ++ I ++ + IP I +K Sbjct: 475 TIQKLLVPIEFQVECEDTDKILTSELEEYKKIDIIVKKIQNQTYRLESIPNICNKYE--- 531 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 +II + + + + + AT+AC +I+ + L+ E Sbjct: 532 ---NIIIQFFKTRKSKIIDSLETELYATLACRQAIKCNDTISLEFSQFLINEFFNLKL-K 587 Query: 572 QCNHGRPTFIKLKLSDIEK 590 C HGR + K+ ++EK Sbjct: 588 HCPHGRKIYHKITKFELEK 606 >gi|313893442|ref|ZP_07827014.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella sp. oral taxon 158 str. F0412] gi|313442083|gb|EFR60503.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella sp. oral taxon 158 str. F0412] Length = 676 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 136/484 (28%), Positives = 222/484 (45%), Gaps = 16/484 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L E IN+IAAGE++ERP+ IKELIENS+DA ++ +E I GG ++ +ITDNG Sbjct: 3 TIHVLDETTINKIAAGEVVERPASVIKELIENSIDASATNIEVEIGDGGVAYMRITDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ +A+ RH TSKI +D +I + GFRGEAL SI +VSH +L +R ++ G Sbjct: 63 GMTEEDARLAILRHATSKIQQVEDLFDIASLGFRGEALASIASVSHFSLTTRKADSDLGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G + P PGT +E+RDLF+ PAR FLKSE+ E++ I D++ ++A++ Sbjct: 123 RITVDGGTFTDCIPYGAAPGTTIEIRDLFYNTPARRKFLKSERTESSKIQDIVGKLALSN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF NGN + ++ + G ++ + +S+ I + G Sbjct: 183 PHISFKLIVDDR---VAIITPGNGNIGDTVAALYGYKTKDDIFTVAYESDSIYIDGVVSK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT + + +N R + DK I+ I AY +P +P+VVL + + VD+NV Sbjct: 240 PTLLKSTRIWQTIIVNNRVISDKTIMKAIDNAYHALLPKNGHPLVVLNITVPAGMVDINV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP KS ++F + II + I A+N + L ++ L K + Sbjct: 300 HPRKSEVKFSDDKIIFKAVYHGILNALN-------NPLHERYERESSAYMGISESLSKDS 352 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 ++ NT +S + T +D ++ +E + + Sbjct: 353 SNTHNTAINQGDDNTNISHGNSTYDSYRTPPVVHDDMQSAEHIATAVDYDKVFGGRRTKG 412 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + G + E L + + + + + E + Sbjct: 413 YEVMRG----ETTQFVENLKAKGYTPPTPKATYEQSSFTDESFNAVPKEFTSYTKEDIDR 468 Query: 480 LHRL 483 L Sbjct: 469 FKSL 472 Score = 171 bits (433), Expect = 3e-40, Method: Composition-based stats. Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 3/245 (1%) Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 P +S T+ +E T + + + + E + Sbjct: 434 PPTPKATYEQSSFTDESFNAVPKEFTSYTKEDIDRFKSLSHDIREQDVEERTIQNSGFLP 493 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q+ YI+++ D L I+DQHAAHER+ ++K+ +S I Q++L P+ + + E Sbjct: 494 MGQVASCYILAKKGDDLYIIDQHAAHERVRYDKL--CKSSESIPMQSILVPQYSEATDDE 551 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 L+ E E L LG E GP I + P L + ++L+ + + + Sbjct: 552 MNLVEEERETLLDLGFDVELGGPTKIKLVGAPVDLVESKAFEILQYVFSYLHEHQQPTKA 611 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 Q +LA +C G+I++G + +M L+ ++ C HGRPT IK ++ Sbjct: 612 Q-LRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTEKPYVCPHGRPTIIKFTPDELG 670 Query: 590 KLFGR 594 KLF R Sbjct: 671 KLFLR 675 >gi|309805306|ref|ZP_07699357.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LactinV 09V1-c] gi|308165382|gb|EFO67614.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LactinV 09V1-c] Length = 593 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 150/602 (24%), Positives = 266/602 (44%), Gaps = 52/602 (8%) Query: 32 ENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHT 89 EN+LDA S+R++ G + DNG G+ ++EI +A RH TSKI+ D NI T Sbjct: 1 ENALDAGSTRIKIDFIDAGLKQIMVQDNGSGIAADEIDLAFMRHATSKINTNHDLFNIAT 60 Query: 90 FGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFF 149 GFRGEAL SI AV+ + +++ + G +A GT + V+DLF+ Sbjct: 61 LGFRGEALASIAAVAKVDIVTNT-GDVNGIHAIFEDSNKVKQEAIASPQGTKIVVKDLFY 119 Query: 150 TIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERI 209 PARL +LKSE+ E I D++ R+A+ YP+VSF + + + ++ + + + + Sbjct: 120 NTPARLKYLKSERTEIMKIVDIVNRLALGYPQVSFELT---NRQKQLLKTTGHDDLRQTA 176 Query: 210 SQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIR 269 + + G + + +S + + G R N + +N R V++ ++ I Sbjct: 177 ANIYGIKVAEKMLAIYAQSPDFKIAGLISRADDTRSTRNFITLLLNTRYVKNYRLVQAIV 236 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + GRYP ++ +++DP VDVNVHP K +R + + I+++I + + Sbjct: 237 DGYGTRLLKGRYPFAIVKIDLDPLLVDVNVHPTKQEVRLSKESELARLIVRTIDQVLGAT 296 Query: 330 GISTSS---------VLSKKMISSFHQDNAPKTHLP-KYATSLTNTQEKLFLQEN----- 374 +S ++ + ++ + +P +++ T + ++E+ Sbjct: 297 EHEIASLDNATESKQTKLDQLEFNLNEAVVDTSRIPVEFSMPNDLTDDSSKVKEDDTTFV 356 Query: 375 ---------------------RLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 + T S SE E+ Q+ Sbjct: 357 SLKHPRQDEHYLVTTTWDENVQAQTALSPFSASQLSSEVTTSSEQILVNRLPQLQCLGQM 416 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H+ Y+++ + L IVDQ AA RL F+K+ + QTLL I+D + + Sbjct: 417 HE-YLLATADNDLYIVDQVAADNRLAFDKLLLQMQAENNYEQTLLDNIILDFSMIDFLKV 475 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 + D +LG+ E FG + ++E P L + Q ++ +ID I+ + RI Sbjct: 476 QDKLADFKKLGLNLEEFGGRSFVLQEYPLWLENCDQIQ-IKAVIDLILAHINAPLDKIRI 534 Query: 534 E---NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 E I+AT + IR + + S+EM +L + + N G+ K+ +D+ K Sbjct: 535 ELAKKIVATK--H--IRR-KSLNSLEMVEMLTSLSNSSNPYHDPFGKIIIAKISENDLRK 589 Query: 591 LF 592 LF Sbjct: 590 LF 591 >gi|264677242|ref|YP_003277148.1| DNA mismatch repair protein MutL [Comamonas testosteroni CNB-2] gi|262207754|gb|ACY31852.1| DNA mismatch repair protein MutL [Comamonas testosteroni CNB-2] Length = 745 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 121/385 (31%), Positives = 206/385 (53%), Gaps = 7/385 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ ++EL++N+LD+ ++++ + GG + D+G Sbjct: 28 PIRDLPDELISQIAAGEVVERPASVVRELVDNALDSGAAQITVRLLAGGVRLIAVEDDGC 87 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A++RH TSKISD D + T GFRGEAL +I +VS ++ SRP ++ Sbjct: 88 GIPRDELPVALRRHATSKISDLHDLETVATMGFRGEALAAIASVSETSIFSRPAGQDSAY 147 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ RP A N GT VEV++LFF+ PAR FLK++ E + +RR A+A Sbjct: 148 LLDARSGEL---RPAARNQGTTVEVKELFFSTPARRKFLKTDATELAHCIESVRRHALAR 204 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P V F + + + R++ V+ + F++N+V ++ + + + G Sbjct: 205 PDVGFAIWHEGKLVEQWRAAGSTPDEALSRRLADVLNDKFVDNSVAVDHWAGPVHVTGRA 264 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 GIP R +Q + ++NGR V+DK + R+AY + + + PV L +EIDP +VDV Sbjct: 265 GIPDAARSRPDQQFCYVNGRFVRDKVLTHAARSAYEDVLHGNKQPVYALYIEIDPARVDV 324 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RFR+ + + +I+ A+ + + + + T P Sbjct: 325 NVHPTKIEVRFRDSREVHQAVRHAIENALATPRAAAVVEAAAQEAARQPGLIDESTATPV 384 Query: 358 YATSLTNTQEKLFLQENRLSTNDLL 382 A S + R+S + Sbjct: 385 AAKSANKPAAAPAWPQTRMSFGEPA 409 Score = 212 bits (540), Expect = 1e-52, Method: Composition-based stats. Identities = 77/195 (39%), Positives = 117/195 (60%), Gaps = 4/195 (2%) Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN----STKITSQTLLT 459 + LG A AQ+H YI+++ + G+VIVD HAAHER+++E+++ N +I SQ LL Sbjct: 549 WPLGRAVAQLHGVYILAENSQGMVIVDMHAAHERIVYEQLKNAVNTENGDQQIPSQPLLI 608 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P E A H E L LG++ F P +A+R +PA L++ + +L R ++ E Sbjct: 609 PATFAATPEEVATAEAHAETLLTLGMEVSPFSPKTLAVRAVPATLAQGDAVELARSVLAE 668 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 + + +Q ILATMAC+G++R+ RK+ EMN LLR+ME S QCNHGRPT Sbjct: 669 LAQHDASTVVQRARNEILATMACHGAVRANRKLTLDEMNALLRQMEVTERSDQCNHGRPT 728 Query: 580 FIKLKLSDIEKLFGR 594 + +L + +++ LF R Sbjct: 729 WRQLSMKELDALFLR 743 >gi|27262202|gb|AAN87382.1| DNA mismatch repair protein MutL [Heliobacillus mobilis] Length = 695 Score = 340 bits (873), Expect = 3e-91, Method: Composition-based stats. Identities = 121/335 (36%), Positives = 190/335 (56%), Gaps = 6/335 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L +NQIAAGE++ERP+ +KEL+EN+LDA ++R++ + GG+ +I DNG G Sbjct: 4 IRLLDTHTVNQIAAGEVVERPASIVKELMENALDAGATRIDVHLTDGGRQLIRIVDNGCG 63 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ E+ + ++RH TSKI ++D I T GFRGEALPSI +VS + +R ++ G + Sbjct: 64 MSPEDAALCIERHATSKIGSAEDLMAIETLGFRGEALPSIASVSRMEFTTRRHCDSQGTR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G + V V PGT ++V DLF+ PAR FL+S E + +VI R+A+A+P Sbjct: 124 LRVEGGERQPVETVGAPPGTTIQVEDLFYNTPARRKFLRSSTAEGSACAEVIWRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT-LQGYTGI 239 V+ + + + ++ N E +S V G + I + + L+ KS+E L G+ G Sbjct: 184 HVAVSLTQGRQVTFR---SPGNNKTLETLSAVYGREVIPHLLALSHKSSEGWELNGFIGE 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ NR N N FIN R V+ + + + Y +P+ R+P VL L + P +VDVN Sbjct: 241 PSLNRANRNHQTWFINQRWVRSRSLSLAVEEVYQGLLPVHRFPFFVLNLLLPPHKVDVNA 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 HP K I+ I FI +++ + + +S Sbjct: 301 HPTKQEIKIDQERDICEFIQSVLKETLRSRALSRP 335 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 12/275 (4%) Query: 323 QKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLL 382 + A N T + + F + + P S + E+ + DL Sbjct: 429 EAATNTINDITKTDSKEISKGLFDKTSYPSPQYCVETESPEKYPGNTIVAESLPCSEDLP 488 Query: 383 PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 S V E I Q ++YI+++ L ++DQHAAHER+++ Sbjct: 489 KSPLYDVPLKAAMVAE--------WIPIGQFQRSYILAEGQGALYLIDQHAAHERVLYYA 540 Query: 443 MRQDFNS---TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 +++ + + Q LL P + L E ++E DL GI E FG N + IR Sbjct: 541 LKEKLEQAIDVEQSCQQLLIPVTVTLTPAEFDAVIERISDLRDAGIIMEHFGGNTLLIRA 600 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 +P L LLRDIID I +D L+++AC G++++G+ M EM Sbjct: 601 VPLGLPPGEEEGLLRDIIDRI-QGGAKLKKEDLCREALSSLACRGAVKAGQTMSHPEMVA 659 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ + C HGRP +++ S++E F R Sbjct: 660 LLQQVARLEGMDTCPHGRPYLLRIDRSELEHRFHR 694 >gi|238019354|ref|ZP_04599780.1| hypothetical protein VEIDISOL_01218 [Veillonella dispar ATCC 17748] gi|237864053|gb|EEP65343.1| hypothetical protein VEIDISOL_01218 [Veillonella dispar ATCC 17748] Length = 673 Score = 340 bits (873), Expect = 3e-91, Method: Composition-based stats. Identities = 120/328 (36%), Positives = 185/328 (56%), Gaps = 5/328 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L E IN+IAAGE++ERP+ IKELIENS+DA ++ +E I GG ++ +ITDNG Sbjct: 3 TIHVLDETTINKIAAGEVVERPASVIKELIENSIDASATNIEVEIGDGGVAYMRITDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ +A+ RH TSKI +D +I + GFRGEAL SI +VSH ++ +R + G Sbjct: 63 GMTEEDARLAILRHATSKIQHVEDLFDIASLGFRGEALASIASVSHFSMTTRKADADLGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G + P PGT +E+RDLF+ PAR FLK+E+ E++ I D++ ++A++ Sbjct: 123 RITVDGGTFTDCIPYGAAPGTTIEIRDLFYNTPARRKFLKTERTESSKIQDIVGKLALSN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF NGN + ++ + G ++ + +S+ I + G Sbjct: 183 PHISFKLIIDDR---VAIITPGNGNIGDTVAALYGYKTKDDIFTVAYESDSIYIDGVVSK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT + + +N R + DK I+ I AY +P +P+VVL + + VD+NV Sbjct: 240 PTLLKSTRIWQTIIVNNRVISDKTIMKAIDNAYHALLPKNGHPLVVLNITVPAEMVDINV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 HP KS ++F + II + I A+N Sbjct: 300 HPRKSEVKFSDDKIIFKAVYHGILNALN 327 Score = 171 bits (432), Expect = 4e-40, Method: Composition-based stats. Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 3/245 (1%) Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 P +S T+ E T + + + + E + Sbjct: 431 PPAPKATYEQSSFTDESFDAVPTEYTSYTKEDVERFKALAHDIREDNTEERTIQNSGFLP 490 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q+ YI+++ D L I+DQHAAHER+ ++K+ +S I Q++L P+ + + E Sbjct: 491 MGQVASCYILAKKGDDLYIIDQHAAHERVRYDKL--CKSSEAIPMQSILVPQYSEATDDE 548 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 L+ E E L LG E GP I + P L + ++L+ + + D Sbjct: 549 MNLVEEEREILLDLGFDIELGGPTKIKLVGAPVDLVESKAFEILQYVFSYLHDHQQPTKA 608 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 Q +LA +C G+I++G + +M L+ ++ C HGRPT IK ++ Sbjct: 609 Q-LRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTEKPYVCPHGRPTIIKFTPDELG 667 Query: 590 KLFGR 594 KLF R Sbjct: 668 KLFLR 672 >gi|29840706|ref|NP_829812.1| DNA mismatch repair protein [Chlamydophila caviae GPIC] gi|33301356|sp|Q821I9|MUTL_CHLCV RecName: Full=DNA mismatch repair protein mutL gi|29835056|gb|AAP05690.1| DNA mismatch repair protein mutL [Chlamydophila caviae GPIC] Length = 580 Score = 340 bits (873), Expect = 3e-91, Method: Composition-based stats. Identities = 141/544 (25%), Positives = 251/544 (46%), Gaps = 11/544 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L INQIAAGE+IE +KEL+EN+LDA + +E GGG+ + DNG Sbjct: 6 PIQLLDTITINQIAAGEVIENSISVVKELVENALDAGADEIEVETLGGGQGLIVVKDNGC 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+SE++ +A++RH TSKI + D ++ +FGFRGEALP+I ++S + ++S P G+ Sbjct: 66 GMSSEDVALALKRHATSKIGEFSDVFSLSSFGFRGEALPAIASISKMEILSCPRAGE-GS 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G +I + GT + + LF+ +P R F KS Q + + ++ ++ Sbjct: 125 RTIIHGGEIVTSEAKPRQVGTTISIDSLFYNVPVRRGFQKSPQTDRMAMRKLLENRILSV 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V +++ + + + + F ER++ V+GE F+ A+ +++ N + + G+ G Sbjct: 185 ENVGWSWVSERQQEFHIFKHQG---FAERVAFVMGEGFMQEALRVDKGGNLVRVVGFLGS 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P F+R VFIN R V FI I AY+ +P RYPV VL L + P D NV Sbjct: 242 PGFHRPTRLGQRVFINDRPVDSTFISKKISEAYSMLLPPQRYPVFVLKLYLPPEWCDFNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ +R + F+ ++I + + V + S+ LP+ A Sbjct: 302 HPQKTEVRILREEFVGEFLSETIGEVLA----RPQEVSVFETASTLPALRFFDEQLPESA 357 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L + + S++ LP D + + + ++ Sbjct: 358 LEGLQGSNVLPVVKLTPSSSGSLPFLDREPDPLPVDRQTQISWGASQEVRFLTSLGKIVL 417 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ ++G+ + +A + L + + ++ SQ+ L P +++ E + H E+ Sbjct: 418 AEDSEGVHAIFTESARKHLFYLSLVENHQHN-YKSQSFLVPLCLEVTPQERIFLSSHIEE 476 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 LGI+ + GP +I P + ++ + + + E E + T Sbjct: 477 FKLLGIEISQMGPCVFSIESAPTFIGEEELKLWILSLAAESAKVDKRAMTLLIKEALTQT 536 Query: 540 MACY 543 + C Sbjct: 537 IFCK 540 >gi|294791814|ref|ZP_06756962.1| DNA mismatch repair protein MutL [Veillonella sp. 6_1_27] gi|294457044|gb|EFG25406.1| DNA mismatch repair protein MutL [Veillonella sp. 6_1_27] Length = 685 Score = 340 bits (873), Expect = 3e-91, Method: Composition-based stats. Identities = 120/328 (36%), Positives = 186/328 (56%), Gaps = 5/328 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L E IN+IAAGE++ERP+ IKELIENS+DA ++ +E I GG ++ +ITDNG Sbjct: 3 TIHVLDETTINKIAAGEVVERPASVIKELIENSIDASATNIEVEIGEGGVAYMRITDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ +A+ RH TSKI +D +I + GFRGEAL SI +VSH +L +R ++ G Sbjct: 63 GMTEEDARLAILRHATSKIQQVEDLFDIASLGFRGEALASIASVSHFSLTTRKADSDLGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G + P PGT +E++DLF+ PAR FLK+E+ E + I D++ ++A++ Sbjct: 123 RITVDGGTFTDCIPYGAAPGTTIEIKDLFYNTPARRKFLKTERTEASKIQDIVGKLALSN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF NG+ + ++ + G ++ + +S+ I + G Sbjct: 183 PHISFKLIIDDR---VAIITPGNGDISDTVAALYGYKTKDDIFTVAYESDSIYIDGVVSK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT + + +N R + DK I+ I AY +P +P+VVL + + R VD+NV Sbjct: 240 PTLLKSTRIWQTIIVNNRVISDKTIMKAIDNAYHALLPKNGHPLVVLNITVPARMVDINV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 HP KS ++F + II + I A+N Sbjct: 300 HPRKSEVKFSDDKIIFKAVYHGILNALN 327 Score = 171 bits (434), Expect = 3e-40, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 118/265 (44%), Gaps = 11/265 (4%) Query: 337 LSKKMISSFHQDNAPKTHLP-------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + + S F ++ K + P + ++ + + E + ++ D+ ++ Sbjct: 424 VMRGETSQFVENLKTKGYTPPAPKATYEQSSFVDESFEAVPTAYTSYTSEDVEKFKSLSH 483 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 N+ +EE + Q+ YI+++ D L I+DQHAAHER+ ++K+ +S Sbjct: 484 DIRNEEIEERTIQNSGFLPM-GQVASCYILAKKGDDLYIIDQHAAHERVRYDKL--CKSS 540 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 I Q++L P+ + E L+ E E L LG E GP I + P L + Sbjct: 541 ESIPMQSILVPQYSEATNDEMNLVEEERETLLDLGFDVELGGPTKIKLVGAPVDLVESKA 600 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 ++L+ I + D Q +LA +C G+I++G + +M L+ ++ Sbjct: 601 FEILQYIFSYLHDHQQPTKAQ-LRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTEK 659 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT IK ++ KLF R Sbjct: 660 PYVCPHGRPTIIKFTPDELGKLFLR 684 >gi|330443960|ref|YP_004376946.1| DNA mismatch repair protein mutL [Chlamydophila pecorum E58] gi|328807070|gb|AEB41243.1| DNA mismatch repair protein mutL [Chlamydophila pecorum E58] Length = 575 Score = 340 bits (873), Expect = 3e-91, Method: Composition-based stats. Identities = 134/540 (24%), Positives = 249/540 (46%), Gaps = 17/540 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L +NQIAAGE+IE + +KELIEN+LDA + +E GGG+ + DNG Sbjct: 6 PIQLLDTITVNQIAAGEVIENAASVVKELIENALDAGADEIELETLGGGQGLIIVKDNGC 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E++ +A+QRH TSKI D D ++H+FGFRGEALPSI ++S + ++S + G Sbjct: 66 GMTQEDVSLALQRHATSKIRDFSDIFSLHSFGFRGEALPSIASISRMEILSSLQEGE-GV 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G + P A GT + V LF+ +P R F KS V+ L+ ++ +A Sbjct: 125 RCVIQGGESVLCEPAARRRGTTITVDSLFYNVPVRKGFQKSPHVDRMLMRKMLENRILAT 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V +++ + +S + + ++ V+GE+F+ A+E++ ++ ++G+ G Sbjct: 185 EAVGWSWISERSQELLVLKHQGFADR---VALVMGENFMQEALEIDTHDGDVRIKGFFGS 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 F+R + +F+N R V+ FI + ++ +P+ RYPV VL L + P + D NV Sbjct: 242 LNFHRPSRQGQRIFVNDRPVESGFISRKVGEMFSVLLPVQRYPVFVLKLYLPPARCDFNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ +R ++ + + + + + IS + Sbjct: 302 HPQKTEVRIFQEELVGEKLKICLSEVLMRSQQIPREPQPPSCISEVPFPTPTIFEPRDLS 361 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L + F E L ++ ++ EA + + + ++ ++ Sbjct: 362 EDLLEKEVGGFSLEEALPPKQEFAQGQK----NSLQIDWLEACNVRFLTSLGKV----VL 413 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ +G+ + + L + +++ SQT L P + + E +++ + E+ Sbjct: 414 AEDFEGVYAIFPDVLRKHLFYLSLQEPQQHK---SQTFLIPLTLQVTPQESQVLLLYMEE 470 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L + GI+ + GP I P + ++ + + + E + I L+ Sbjct: 471 LCQFGIELSQVGPQVFIIESAPEFIEEEELKAWMLLLASEQRERVGREAFLMFIRETLSR 530 >gi|294793675|ref|ZP_06758812.1| DNA mismatch repair protein MutL [Veillonella sp. 3_1_44] gi|294455245|gb|EFG23617.1| DNA mismatch repair protein MutL [Veillonella sp. 3_1_44] Length = 681 Score = 340 bits (873), Expect = 3e-91, Method: Composition-based stats. Identities = 126/412 (30%), Positives = 206/412 (50%), Gaps = 9/412 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L E IN+IAAGE++ERP+ IKELIENS+DA ++ +E I GG ++ +ITDNG Sbjct: 3 TIHVLDETTINKIAAGEVVERPASVIKELIENSIDASATNIEVEIGEGGVAYMRITDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ +A+ RH TSKI +D +I + GFRGEAL SI +VSH +L +R ++ G Sbjct: 63 GMTEEDARLAILRHATSKIQQVEDLFDIASLGFRGEALASIASVSHFSLTTRKADSDLGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G + P PGT +E++DLF+ PAR FLK+E+ E + I D++ ++A++ Sbjct: 123 RITVDGGTFTDCIPYGAAPGTTIEIKDLFYNTPARRKFLKTERTEASKIQDIVGKLALSN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF NG+ + ++ + G ++ + +S+ I + G Sbjct: 183 PHISFKLIIDDR---VAIITPGNGDISDTVATLYGYKTKDDIFTVAYESDSIYIDGVVSK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT + + +N R + DK I+ I AY +P +P+VVL + + R VD+NV Sbjct: 240 PTLLKSTRIWQTIIVNNRVISDKTIMKAIDNAYHALLPKNGHPLVVLNITVPARMVDINV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN----KKGISTSSVLSKKMISSFHQDNAPKTHL 355 HP KS ++F + II + I A+N ++ SS +++ Sbjct: 300 HPRKSEVKFSDDKIIFKAVYHGILNALNNPLHERYERESSSYMTGTVANISDKYGNDIAS 359 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 + + L N + +P+ + + + + G Sbjct: 360 NSNSDIKKFSSNSTSLAGNTTYDSYQVPTVVHDSMQSAEHIATAIDYDKVFG 411 Score = 170 bits (431), Expect = 5e-40, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 11/265 (4%) Query: 337 LSKKMISSFHQDNAPKTHLP-------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + + S F ++ K + P + ++ + + E + ++ D+ ++ Sbjct: 420 VMRGETSQFVENLKTKGYTPPAPKATYEQSSFVDKSFEAVPTAYTSYTSEDVEKFKSLSH 479 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 N+ +E+ + Q+ YI+++ D L I+DQHAAHER+ ++K+ +S Sbjct: 480 DIRNEEIEDRTIQNSGFLPM-GQVASCYILAKKGDDLYIIDQHAAHERVRYDKL--CKSS 536 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 I Q++L P+ + + E L+ E E L LG E GP I + P L + Sbjct: 537 ESIPMQSILVPQYSEATDDEMNLVEEERETLLDLGFDVELGGPTKIKLVGAPVDLVESKA 596 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 ++L+ I + D Q +LA +C G+I++G + +M L+ ++ Sbjct: 597 FEILQYIFSYLHDHQQPTKAQ-LRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTEK 655 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT IK ++ KLF R Sbjct: 656 PYVCPHGRPTIIKFTPDELGKLFLR 680 >gi|163814089|ref|ZP_02205481.1| hypothetical protein COPEUT_00242 [Coprococcus eutactus ATCC 27759] gi|158450538|gb|EDP27533.1| hypothetical protein COPEUT_00242 [Coprococcus eutactus ATCC 27759] Length = 702 Score = 340 bits (873), Expect = 3e-91, Method: Composition-based stats. Identities = 116/392 (29%), Positives = 210/392 (53%), Gaps = 9/392 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + IN+IAAGE+IE+PS IKEL+ENS+D+ ++ + + G G SF ++TDNG G Sbjct: 2 IKVLDQNTINKIAAGEVIEKPSSVIKELVENSIDSGATAITVEVKGSGLSFLRVTDNGSG 61 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A RH TSK+ +D +I + GFRGEAL SI +V+ + ++++ + TG + Sbjct: 62 IKKDEVKLAFLRHATSKLVTVEDLLSISSLGFRGEALASIASVAQVEMITKTADDVTGLR 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + S + GT + VR+LF+ PAR F+K++ E + I D++ R+ +++P Sbjct: 122 YQIHGGREISSEEIGAPGGTTIIVRNLFYNTPARKKFMKTDLTEISYIYDLMCRICMSHP 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 K+SF F + +++ F S NG + I + G D +N +E+N +++ + + GY P Sbjct: 182 KISFKFISNGTDKL---FTSGNGKLRDIIYHIYGRDITSNLLEINAENDYMKISGYIARP 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 +RGN + ++N R ++ + I A+ + + ++P + ++ P +DVNVH Sbjct: 239 CISRGNRSFEGYYVNHRYIKSAVLTKAIEDAFRTFVMIHKFPFTEINFQVRPDLLDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN----APKTHLP 356 P K ++F N I +F +I++ + K + K ++ AP+ Sbjct: 299 PTKMELKFANSQDIYSFTYNAIRETLLFKELIPDVAPGKDSKPETYKQRNVGDAPEAFEN 358 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 K +L + + T++ L + Sbjct: 359 KRREALVGPVAQAKAAPTHMVTDNSLVKSENA 390 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 3/284 (1%) Query: 313 IIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ 372 ++ + A + I S+ + + P+ + + + + Sbjct: 418 ALQQPLKPDNIPAPVRPIIDVIDETKDTNTSAEKKSDNNTYEQPQKSGYSYSGRHQEIPG 477 Query: 373 ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA--CAQIHQNYIISQTTDGLVIVD 430 + + D + +E T Q+ + Y + + I+D Sbjct: 478 SKVAESKASYMAVDDRKYVQQNMFQEKFLTKEARAKHRLIGQLFKTYWLIEYDGKFFIMD 537 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAAHE++ +E++ +++ + KI SQ L+ P ++ L E + E+ E LG + E F Sbjct: 538 QHAAHEKVKYEELMENYKNKKIYSQYLMPPAVVTLSATEIEFLHENMETFEALGYQIENF 597 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 G + +P L + +L D I + S+ T+ I L+TMAC +I+ Sbjct: 598 GGREFKLNAVPDNLFGLDGRELFIDFIADASSSAKKVTIDVFIHK-LSTMACKAAIKGNT 656 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ E + L+ ++ K N C HGRPT I + ++IEK F R Sbjct: 657 EISFKEADALIDQLLKLENPYTCPHGRPTVISMTEAEIEKKFKR 700 >gi|282850162|ref|ZP_06259541.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella parvula ATCC 17745] gi|282579655|gb|EFB85059.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella parvula ATCC 17745] Length = 679 Score = 340 bits (873), Expect = 3e-91, Method: Composition-based stats. Identities = 120/328 (36%), Positives = 185/328 (56%), Gaps = 5/328 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L E IN+IAAGE++ERP+ IKELIENS+DA ++ +E I GG ++ +ITDNG Sbjct: 3 TIHVLDETTINKIAAGEVVERPASVIKELIENSIDASATNIEVEIGEGGVAYMRITDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ +A+ RH TSKI +D +I + GFRGEAL SI +VSH +L +R ++ G Sbjct: 63 GMTEEDARLAILRHATSKIQQVEDLFDIASLGFRGEALASIASVSHFSLTTRKADSDLGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G + P PGT +E++DLF+ PAR FLK+E+ E + I D++ ++A++ Sbjct: 123 RITVDGGTFTDCIPYGAAPGTTIEIKDLFYNTPARRKFLKTERTEASKIQDIVGKLALSN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF NG+ + ++ + G + + +S+ I + G Sbjct: 183 PHISFKLIIDDR---VAIITPGNGDISDTVAALYGYKTKEDIFTVAYESDSIYIDGVVSK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT + + +N R + DK I+ I AY +P +P+VVL + + R VD+NV Sbjct: 240 PTLLKSTRIWQTIIVNNRVISDKTIMKAIDNAYHALLPKNGHPLVVLNITVPARMVDINV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 HP KS ++F + II + I A+N Sbjct: 300 HPRKSEVKFSDDKIIFKAVYHGILNALN 327 Score = 171 bits (433), Expect = 3e-40, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 118/265 (44%), Gaps = 11/265 (4%) Query: 337 LSKKMISSFHQDNAPKTHLP-------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + + S F ++ K + P + ++ + + E + ++ D+ ++ Sbjct: 418 VMRGETSQFVENLKTKGYTPPAPKATYEQSSFVDESFEAVPTAYTSYTSEDVEKFKSLSH 477 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 N+ +EE + Q+ YI+++ D L I+DQHAAHER+ ++K+ +S Sbjct: 478 DIRNEEIEERTIQNSGFLPM-GQVASCYILAKKGDDLYIIDQHAAHERVRYDKL--CKSS 534 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 I Q++L P+ + E L+ E E L LG E GP I + P L + Sbjct: 535 ESIPMQSILVPQYSEATNDEMNLVEEERETLLDLGFDVELGGPTKIKLVGAPVDLVESKA 594 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 ++L+ I + D Q +LA +C G+I++G + +M L+ ++ Sbjct: 595 FEILQYIFSYLHDHQQPTKAQ-LRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTEK 653 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT IK ++ KLF R Sbjct: 654 PYVCPHGRPTIIKFTPDELGKLFLR 678 >gi|262341304|ref|YP_003284159.1| DNA mismatch repair protein MutL [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272641|gb|ACY40549.1| DNA mismatch repair protein MutL [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 575 Score = 340 bits (872), Expect = 4e-91, Method: Composition-based stats. Identities = 143/600 (23%), Positives = 269/600 (44%), Gaps = 33/600 (5%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 MK I+ L +I+QIAAGE+I RPS ++EL+EN++DA + ++ I GK+ Q+ D Sbjct: 1 MKDLIQFLPINVISQIAAGEVILRPSSVLRELLENAIDANAKMIDIFIKNSGKTLIQLID 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 +G GM+ + M++QR+ TSKI +DD + T GFRGEAL SI +S L + ++ +N Sbjct: 61 DGDGMSVNDAKMSIQRYATSKIKQADDIFKMRTKGFRGEALASIALISQLEIQTKNQENV 120 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G + + KI P+ M GT + V+++F+ +PAR FLKS Q+E I ++ Sbjct: 121 LGIHLFVEEGKIKEEIPINMLKGTRISVKNIFYKLPARRQFLKSSQIEFQHIVHEFYKIV 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 +A+ + + F + F + ERI ++ + + K N I ++G+ Sbjct: 181 LAHRNILYRFYHNDK----IVFYFQEASLRERIKEIFKNE-NKILTPIFIKKNRILVKGF 235 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 +P + + +N R V F+ I AY + + + + IDP V+ Sbjct: 236 VSVPDSSI-KKGNQLILVNQRCVTHLFLHKKIIHAYDGFLKDLKTVSYFIFIHIDPNFVN 294 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 N+HP+K ++ II I Q I+ + + + L K + + Sbjct: 295 WNIHPSKKEVQLEEEDIIGCMIQQEIKNILFDQYEVKNKELKKYDVLLSCDSKNSFLNDF 354 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH-- 414 + E+L ++ + +L +D ++ N + + + + Sbjct: 355 SF--------EELSYKKKVIQLENLFRLNDSSFFNKNVDLTNQLSRYIANKKRIITLQIN 406 Query: 415 -QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 + I + + ++ VDQH AH ++FE + + SQ L P + LL+ E + Sbjct: 407 RKYIIFTLNNEYIIFVDQHRAHRNILFEFFLR---EKNLISQQFLFPIEVRLLKKEFISL 463 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 +DL G F + + +P + + +L ++ I+ + + Sbjct: 464 KNIKDDLINFGFHL-YFCNESAYLYSVPENIHQ----NILVEVFQNILKYNFIKGKKKNK 518 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + ++ +++ SI+ G ++ +M L+R++ N + + G P F L+ + F Sbjct: 519 KILIQSISKSASIKYGTELYPDKMECLIRDLFSCHNPNYTDSGDPIFFVLRKN----FFK 574 >gi|225572116|ref|ZP_03780980.1| hypothetical protein RUMHYD_00410 [Blautia hydrogenotrophica DSM 10507] gi|225040450|gb|EEG50696.1| hypothetical protein RUMHYD_00410 [Blautia hydrogenotrophica DSM 10507] Length = 677 Score = 340 bits (871), Expect = 5e-91, Method: Composition-based stats. Identities = 126/382 (32%), Positives = 207/382 (54%), Gaps = 7/382 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + I++IAAGE++ERPS +KEL EN++DA ++ V I GGK+ +ITDNG Sbjct: 3 KIAVLDKNTIDKIAAGEVVERPSSVVKELTENAIDAGATAVTVEIKDGGKTLIRITDNGA 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++PMA RH TSKI +D I + GFRGEAL SI AV+ + L+++ P + TG Sbjct: 63 GIEKEQVPMAFVRHATSKIEKVEDLEQIVSLGFRGEALSSIAAVAQVELITKTPASITGV 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G + S+ + GT V +LF+ +PAR FLK+ E + ++ +I ++A+++ Sbjct: 123 RYVIEGGEEKSLEEIGAPEGTTFLVHNLFYNVPARSKFLKTAATEGSYVSSLIEQLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF + + S N + + I Q+ G D +E++ ++ ++L+GY G Sbjct: 183 PEISFKYIVNGQVKLH---TSGNFSRRDVIYQIYGRDITKEILEVHYENEFLSLEGYIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ +RGN N +INGR V++K I I AY + +P L +E+ +DVNV Sbjct: 240 PSVSRGNRNFENYYINGRYVKNKIISKAIEDAYKGFLMQHNFPFASLQIEMTGNDLDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +RF + I ++I + + KK + + + + +P+ Sbjct: 300 HPAKMEVRFSRGDEVYKAIYEAILQTLKKKEMIPEVRADQGREAKEERPKMKSGQIPEPF 359 Query: 360 T--SLTNTQEKLFLQENRLSTN 379 +E+ +E+R N Sbjct: 360 EYKERQRLREQTIYEEDRQQKN 381 Score = 191 bits (485), Expect = 3e-46, Method: Composition-based stats. Identities = 62/290 (21%), Positives = 116/290 (40%), Gaps = 13/290 (4%) Query: 305 YIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTN 364 + I + + N + + VL + + F + KT + + Sbjct: 399 KPALKTEEKKVAEIWNTGRPKKNWEILREKPVLHSEEDALFSGTLSEKTPAKEEPKTQNR 458 Query: 365 TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 +Q L+ L + Q+ Y + + D Sbjct: 459 EDTSFEVQTEALAKQLDLFQERML-----------SQKARSRHRLIGQVFDTYWLVEYED 507 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 I+DQHAAHE++++EK+ + + ++ SQ + P ++ L + L++EH + + G Sbjct: 508 KFYIIDQHAAHEKVLYEKIVRQYQEREMISQYISPPVVVSLTMQQETLLLEHMQMFLKFG 567 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 + E FG +I +PA L QL ++ID + + +ATMAC Sbjct: 568 FEIEPFGGKEYSIHAVPADLYGYTEGQLFVEMIDALEQDGQLSM--EVFAGRMATMACKA 625 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ ++ E N L+ ++ N C HGRPT I + +++EK F R Sbjct: 626 AVKGNTQLSFAEANELIDQLLTLDNPYHCPHGRPTIIAMTRTELEKKFKR 675 >gi|317121912|ref|YP_004101915.1| DNA mismatch repair protein MutL [Thermaerobacter marianensis DSM 12885] gi|315591892|gb|ADU51188.1| DNA mismatch repair protein MutL [Thermaerobacter marianensis DSM 12885] Length = 726 Score = 340 bits (871), Expect = 5e-91, Method: Composition-based stats. Identities = 118/332 (35%), Positives = 178/332 (53%), Gaps = 5/332 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L ++INQIAAGE++ERP+ +KEL+ENSLDA + R+ + GG + D+G Sbjct: 3 RIRRLDPQVINQIAAGEVVERPASVVKELVENSLDAGARRIRVDVEEGGLRSITVADDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +AV+RH TSKI+ DD ++ T GFRGEAL +I +V+ L L++RPP + G Sbjct: 63 GMDPDDAMLAVERHATSKITRLDDLAHAGTLGFRGEALAAIASVARLELITRPPGADGGF 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G P A PGT V VRDLFF PAR LK E I DV+ A+A Sbjct: 123 RVVVEGGTARGAGPWASPPGTRVTVRDLFFNTPARRKHLKGPAAEFARIADVVTAHALAR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V F + S +G+ + + G D + + ++GY G Sbjct: 183 PEVRFELVHNGREVLR---TSGSGDRAVVVLECFGPDVAGALIPVVAGDGLRRVEGYVGA 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + + IN R VQ + ++ AY +P RYPV V+ + + +VDVNV Sbjct: 240 PRVARASRAWQFFSINRRPVQVASLRFSLENAYRHLLPARRYPVAVVDVALPGEEVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 HPAK +R + + ++Q A+ K+ + Sbjct: 300 HPAKLEVRLVRERAVAALLYGAVQDALAKRDL 331 Score = 160 bits (406), Expect = 4e-37, Method: Composition-based stats. Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 31/218 (14%) Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-KITSQTLLTPEIID 464 Q+ Y+ DGL +VDQHAAHER+ FE+ ++ S + +Q L P +ID Sbjct: 507 QLQPLGQVAGTYLACAGPDGLYLVDQHAAHERVYFERFLREGASPAGVPAQMLAVPVVID 566 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI-------------PQ 511 L E AL+ EH + RLG + E FGP ++A+R +PA L+ + Sbjct: 567 LAPAERALLEEHRAAVARLGFRIEPFGPRSVAVRAVPAALADRPAPDLLVDLLSRLLVEA 626 Query: 512 LLRDIIDEIIDSSTTYTLQ---------------DRIENILATMACYGSIRSGRKMQSIE 556 + R + + + +R ILA AC +I++G ++ E Sbjct: 627 VTRGDGERVGGTGAQDPDPADPGGEGTALAALDTERAARILA--ACKAAIKAGDRLHPRE 684 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M RLL ++ C HGRPT I++ + ++E+ FGR Sbjct: 685 MARLLADLAACRQPYTCPHGRPTVIRVGVEELERRFGR 722 >gi|257866606|ref|ZP_05646259.1| DNA mismatch repair protein [Enterococcus casseliflavus EC30] gi|257872878|ref|ZP_05652531.1| DNA mismatch repair protein [Enterococcus casseliflavus EC10] gi|257800564|gb|EEV29592.1| DNA mismatch repair protein [Enterococcus casseliflavus EC30] gi|257807042|gb|EEV35864.1| DNA mismatch repair protein [Enterococcus casseliflavus EC10] Length = 702 Score = 340 bits (871), Expect = 6e-91, Method: Composition-based stats. Identities = 117/399 (29%), Positives = 207/399 (51%), Gaps = 5/399 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ I G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I T GFRGEALPSI +VS L++ + G+ Sbjct: 63 GIAEEDVLTAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSILSIETAVKDAQQGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + P + GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 FVRLKGGAVEEHLPANLRQGTKITVENLFYNTPARLKYVKTLQTELANIGDIVNRIALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F + KM + +G + I+ + G + + ++ + + + G+ + Sbjct: 183 PEVAFRLVHEGN---KMLSTTGSGQLKQTIAGIYGVETAKKMIAIDTEDLDFKVTGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIRNFALNKAIVAGYGSKLMVGRFPLAVLEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I ++I +A+ + + ++ + + + + Sbjct: 300 HPTKQEVRLSKEEELTKLISKAINEALREINLIPNAADNLRFKKKVADQPKAQQLGLELE 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 ++ +T + +E + PVEE Sbjct: 360 SAGNSTSGLSYNRETGKFEVQGNTYQQTVDNSVEKPVEE 398 Score = 201 bits (511), Expect = 3e-49, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 5/251 (1%) Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQ--ENRLSTNDLLPSDDPTYSEDNDPV--EESEATH 403 K LP+ L + +L Q +++ + + + DD Y + + + EE Sbjct: 441 QTETKASLPEAPVFLPDETPELTAQDLQSQATLHPEMHGDDRNYLKTVERLLEEEPAKER 500 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 + Q+H Y+ +Q+ GL IVDQHAA ER+ +E R+ Q LL P ++ Sbjct: 501 FPQLDYFGQMHGTYLFAQSEAGLYIVDQHAAQERIKYEYYREKIGEVTNDLQELLVPIVL 560 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 D + + E + L +GI E FG N+ +R P ++R++ID ++ + Sbjct: 561 DYPNSDALQLQEQSDKLAEVGIHLESFGTNSFIVRAHPTWYPSGEEEAIIREMIDMLLTT 620 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + +++ E M+C SI++ + + LL+++ K N C HGRP I Sbjct: 621 G-SVSVKKFREATAIMMSCKRSIKANHYLNEAQARILLQDLAKCENPFNCPHGRPVLIHF 679 Query: 584 KLSDIEKLFGR 594 SD+E++F R Sbjct: 680 TNSDMERMFKR 690 >gi|291515608|emb|CBK64818.1| DNA mismatch repair protein MutL [Alistipes shahii WAL 8301] Length = 664 Score = 340 bits (871), Expect = 6e-91, Method: Composition-based stats. Identities = 120/374 (32%), Positives = 194/374 (51%), Gaps = 8/374 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L E + NQIAAGE++ RP+ +KE++EN++DA ++ V+ GGK QI D+G Sbjct: 4 KIRLLPEVVANQIAAGEVVNRPASVVKEMMENAIDAGATSVKVNFRDGGKDLIQIVDDGC 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ + MA RH TSKI +D +HTFGFRGEAL SI AVS + L +R + G Sbjct: 64 GMSPIDARMAFDRHATSKIGAVEDIYALHTFGFRGEALASIAAVSQVELRTRQAGDEVGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q I+G + ++ PV G+ VR+LF+ +PAR FL + I +R+A+ Sbjct: 124 QTEINGGQFAAQNPVMCPVGSQFFVRNLFYNVPARRRFLDKSTTSASQIKAEFQRIALCN 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++F + Y + G+ RI V+G N +E+ ++ ++GY G Sbjct: 184 PQIAFELYANDAPVYTLQA----GSLAGRIVDVVGRHIKQNLLEVEADTSIACIEGYIGR 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + + Y+F+NGR + ++ S I AY + IP P L L +DP ++DVNV Sbjct: 240 PAAAKKRNTEQYLFVNGRFFKSTYLTSAILKAYEKLIPESCQPSYFLYLTLDPGRIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ ++F + + + ++++ + K G + S K + Sbjct: 300 HPQKTEVKFADEEAVWQIVNAAVRETLAKTGAVPLMDFDRD--SPVEIPVLQKGAVYSEP 357 Query: 360 TSLTNTQEKLFLQE 373 +++N+ F +E Sbjct: 358 LAMSNSDYNPFREE 371 Score = 88.2 bits (217), Expect = 4e-15, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 80/220 (36%), Gaps = 5/220 (2%) Query: 339 KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD-DPTYSEDNDPVE 397 + SF Q A LP E E S S D S + Sbjct: 411 RSAAPSFPQAAAGGFALPGADAGEFEEFESGGGFEITPSGGGFDDSALDFIPSSAAPEQQ 470 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + + Y+ + V+VD A ER+++E + + SQ L Sbjct: 471 RFDMPQRPEFTDALPLPGGYVAALLGGRFVVVDVRRARERILYEDYLRMLGNGSSVSQQL 530 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L PE + L E AL+ E+ + LG + G + +R PA + + +LL D++ Sbjct: 531 LFPERLVLSGDEYALLEENAVEFAALGFDIDFCGEGTVEVRGTPADMPADAVDRLLFDLL 590 Query: 518 DEIIDSSTTYTLQD-RIENILATMACYGSIRSGRKMQSIE 556 T +L D R E I MA G+ +GR + E Sbjct: 591 QAFA---TPVSLSDVRREKIAGVMARSGAKGAGRTLSREE 627 >gi|255507173|ref|ZP_05382812.1| DNA mismatch repair protein [Chlamydia trachomatis D(s)2923] gi|289525620|emb|CBJ15098.1| DNA mismatch repair protein [Chlamydia trachomatis Sweden2] gi|296435181|gb|ADH17359.1| DNA mismatch repair protein [Chlamydia trachomatis E/150] gi|296438901|gb|ADH21054.1| DNA mismatch repair protein [Chlamydia trachomatis E/11023] Length = 576 Score = 340 bits (871), Expect = 6e-91, Method: Composition-based stats. Identities = 139/520 (26%), Positives = 246/520 (47%), Gaps = 14/520 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L +NQI+AGE+IE + +KELIENSLDA + + GGG+ + DNG Sbjct: 7 RIRLLDSVTVNQISAGEVIENAASVVKELIENSLDAGADEIHIETLGGGRGQIVVRDNGV 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM EE+P+A+QRH TSKI+ D ++ ++GFRGEALPSI ++S + + + G+ Sbjct: 67 GMDPEEVPVALQRHATSKIAHFADIFSLASYGFRGEALPSIASISKMEIHTARAG-GLGS 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I + P GT + V LF+ +P R +F KS Q++ I ++ ++ Sbjct: 126 KTLIEKGEPVCCEPAPRQQGTTIAVHSLFYNVPMRQSFQKSPQMDRLAIRRLLENSVLSS 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + +T+ + + + + F ER++ V+GE F+ A ++++ ++ + G+ G Sbjct: 186 EGIGWTWISERRQELHV---AKKQGFIERVALVLGESFVQEAFFIDKQQGDLRVLGFLGS 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R +FIN R V+ FI + AYA IP RYP+ VL L + P D NV Sbjct: 243 PNQHRSTRQGQRLFINNRAVESSFISKKVAEAYAWMIPAQRYPIFVLKLFLPPMWCDFNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ +R I N +I++I +A+ ++ S + K +N + Sbjct: 303 HPQKTEVRLLQEGQISNLLIEAISEALLRRSPSLEETVLKVPTEKIPIENEGISVSSIRP 362 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 ++ + ++ + + V E LG + Sbjct: 363 AIVSAPLSCPTFSQQPYLKTEMATIVSRDSASSSLSVVEKVRFLTSLGKVL--------L 414 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + ++G+ +V AA + L + + + +++ QT L P + + + E + E Sbjct: 415 VEDSEGVHVVFVQAARKHLFYVSLLSECLESRLACQTFLLPPSVQMTKLEADFLQMRLEA 474 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 L LGI+ R P++ AI P + ++ + + + + E Sbjct: 475 LTALGIELSRISPDSFAIESAPPFIQEEELKEWIVALAQE 514 >gi|309799336|ref|ZP_07693579.1| DNA mismatch repair protein MutL [Streptococcus infantis SK1302] gi|308117003|gb|EFO54436.1| DNA mismatch repair protein MutL [Streptococcus infantis SK1302] Length = 464 Score = 340 bits (871), Expect = 6e-91, Method: Composition-based stats. Identities = 126/399 (31%), Positives = 215/399 (53%), Gaps = 6/399 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG+G Sbjct: 4 IIELPEVLANQIAAGEVIERPASVVKELVENAIDAGSSQIIVEIEEAGLKKIQITDNGYG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ + P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEIIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G VE+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLASAKKMVEIENADLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I Y + +GR+P+ V+ ++IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGYGSKLMVGRFPLAVIHIQIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +R + + ++I K++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKERELMALVSEAIAKSLKEQTLIPDALENLAKSAVRNREKVEQTTLPLREN 360 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 +L + +L + + D + + N +E+ Sbjct: 361 TLYYEKTEL-TRPPQAEVADHQVNLTEERQDLNLFAKEA 398 >gi|219668759|ref|YP_002459194.1| DNA mismatch repair protein MutL [Desulfitobacterium hafniense DCB-2] gi|219539019|gb|ACL20758.1| DNA mismatch repair protein MutL [Desulfitobacterium hafniense DCB-2] Length = 730 Score = 339 bits (870), Expect = 6e-91, Method: Composition-based stats. Identities = 134/379 (35%), Positives = 192/379 (50%), Gaps = 12/379 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + NQIAAGE++ERP +KELIEN+LDA+++++E +I G G ++ DNG Sbjct: 4 KIHILDIQAANQIAAGEVVERPVSVVKELIENALDAQATQIEVIIEGSGVERIRVQDNGQ 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+++E++P+ V RH TSKI DD + + T GFRGEALPSI +VS L ++SRPP+ +G Sbjct: 64 GISAEDLPLTVLRHATSKIRTIDDLNRLRTLGFRGEALPSIASVSRLEIISRPPEEISGR 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G + PGT + V DLF+ PAR FLKS+ E I+DVI R+++A Sbjct: 124 VLRIQGGEQLEFSETGCPPGTTITVDDLFYNTPARRKFLKSKNTEFGQISDVIGRLSLAR 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSFT + + GN E I V+G+ + L+ + L+GY Sbjct: 184 PDVSFTLKH---PKVLVLQTPGKGNLLESIGAVLGQATARRLLPLSCSLGDWRLEGYISP 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + +N R ++ I I Y IP YP+ +L L I P + DVNV Sbjct: 241 PDLVRSTKQGETLIVNERIIRSNSISRAISEGYHTLIPAKLYPITILKLHIPPHEYDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K IRF + FI + +++ + + V K S PK LP Sbjct: 301 HPTKMEIRFHKEKELMEFIAEGVRRTLLQARPIAPFVKVKNTPS-------PKESLPGAD 353 Query: 360 TSLTNTQEKLFLQENRLST 378 Q L + Sbjct: 354 KVDRPVQGALNFAPKSPHS 372 Score = 194 bits (492), Expect = 5e-47, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 97/188 (51%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q+ YI++ + LVI DQHAAHER+ +E++ + + SQ LL P ++ Sbjct: 542 LRPIGQVFNTYIMATDGEQLVIFDQHAAHERINYERLLAEHQNNPGNSQMLLIPLTMEFT 601 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 GE ++EH L+ +G E FG +R IPA QLLRD +D+++ + Sbjct: 602 PGEEEALLEHFLLLNEMGFILEHFGTRTYLLRGIPAYSGPYQGEQLLRDFLDQVMLNHIP 661 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 T+ +E + +AC SI++ + EM +L+ ++ K N C HGRPT I+L Sbjct: 662 PTMDKLLEEWIYMLACKASIKAKENLTLFEMEQLIVQLSKTLNPYTCPHGRPTMIQLTKE 721 Query: 587 DIEKLFGR 594 ++E F R Sbjct: 722 ELEHRFYR 729 >gi|325567291|ref|ZP_08143958.1| DNA mismatch repair protein HexB [Enterococcus casseliflavus ATCC 12755] gi|325158724|gb|EGC70870.1| DNA mismatch repair protein HexB [Enterococcus casseliflavus ATCC 12755] Length = 702 Score = 339 bits (870), Expect = 7e-91, Method: Composition-based stats. Identities = 117/399 (29%), Positives = 207/399 (51%), Gaps = 5/399 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ I G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I T GFRGEALPSI +VS L++ + G+ Sbjct: 63 GIAEEDVLTAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSILSIETAVKGAQQGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + P + GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 FVRLKGGAVEEHLPANLRQGTKITVENLFYNTPARLKYVKTLQTELANIGDIVNRIALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F + KM + +G + I+ + G + + ++ + + + G+ + Sbjct: 183 PEVAFRLVHEGN---KMLSTTGSGQLKQTIAGIYGVETAKKMIAIDTEDLDFKVTGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIRNFALNKAIVAGYGSKLMVGRFPLAVLEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I ++I +A+ + + ++ + + + + Sbjct: 300 HPTKQEVRLSKEEELTKLISKAINEALREINLIPNAADNLRFKKKVADQPKAQQLGLELE 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 ++ +T + +E + PVEE Sbjct: 360 SAGNSTSGLSYNRETGKFEVQGSTYQQTVDNSVEKPVEE 398 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 2/280 (0%) Query: 316 NFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENR 375 N + ++ + + + + + K + + AP P + T LQ Sbjct: 412 NLLEETEKTFRSLEETLPNKPVRKPFVEDQMETKAPLPEAPAFLPDETPELTAQDLQSQA 471 Query: 376 LSTNDLLPSDDPTYSEDNDPVEESEATH-YQLGIACAQIHQNYIISQTTDGLVIVDQHAA 434 ++ D +EE A + Q+H Y+ +Q+ GL IVDQHAA Sbjct: 472 TLHPEMHGDDRNYLKTVERLLEEEPAKERFPQLDYFGQMHGTYLFAQSEAGLYIVDQHAA 531 Query: 435 HERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA 494 ER+ +E R+ Q LL P ++D + + E + L +GI E FG N+ Sbjct: 532 QERIKYEYYREKIGEVTNDLQELLVPIVLDYPNSDALQLQEQSDKLAEVGIHLESFGTNS 591 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQS 554 +R PA ++R++ID ++ + + +++ E M+C SI++ + Sbjct: 592 FIVRAHPAWYPSGEEEAIIREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNE 650 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL+++ K N C HGRP I SD+E++F R Sbjct: 651 AQARILLQDLAKCENPFNCPHGRPVLIHFTNSDMERMFKR 690 >gi|257876211|ref|ZP_05655864.1| DNA mismatch repair protein [Enterococcus casseliflavus EC20] gi|257810377|gb|EEV39197.1| DNA mismatch repair protein [Enterococcus casseliflavus EC20] Length = 702 Score = 339 bits (870), Expect = 7e-91, Method: Composition-based stats. Identities = 117/399 (29%), Positives = 207/399 (51%), Gaps = 5/399 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA S++++ I G Q+ DNG Sbjct: 3 KIQELSERLANQIAAGEVVERPASVVKELVENAVDAGSTQIDIFIEEAGLRKIQVIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I T GFRGEALPSI +VS L++ + G+ Sbjct: 63 GIAEEDVLTAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSILSIETAVKGAQQGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G + P + GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 FVRLKGGAVEEHLPANLRQGTKITVENLFYNTPARLKYVKTLQTELANIGDIVNRIALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F + KM + +G + I+ + G + + ++ + + + G+ + Sbjct: 183 PEVAFRLVHEGN---KMLSTTGSGQLKQTIAGIYGVETAKKMIAIDTEDLDFKVTGFVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +++DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIRNFALNKAIVAGYGSKLMVGRFPLAVLEIKMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I ++I +A+ + + ++ + + + + Sbjct: 300 HPTKQEVRLSKEEELTKLISKAINEALREINLIPNAADNLRFKKKVADQPKAQQLGLELE 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 ++ +T + +E + PVEE Sbjct: 360 SAGNSTSGLSYNRETGKFEVQGNTYQQTVDNSVEKPVEE 398 Score = 201 bits (511), Expect = 3e-49, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 5/251 (1%) Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQ--ENRLSTNDLLPSDDPTYSEDNDPV--EESEATH 403 K LP+ L + +L Q +++ + + + DD Y + + + EE Sbjct: 441 QTETKASLPEAPVFLPDETPELTAQDLQSQATLHPEMHGDDRNYLKTVERLLEEEPAKER 500 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 + Q+H Y+ +Q+ GL IVDQHAA ER+ +E R+ Q LL P ++ Sbjct: 501 FPQLDYFGQMHGTYLFAQSEAGLYIVDQHAAQERIKYEYYREKIGEVTNDLQELLVPIVL 560 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 D + + E + L +GI E FG N+ +R P ++R++ID ++ + Sbjct: 561 DYPNSDALQLQEQSDKLAEVGIHLESFGTNSFIVRAHPTWYPSGEEEAIIREMIDMLLTT 620 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + +++ E M+C SI++ + + LL+++ K N C HGRP I Sbjct: 621 G-SISVKKFREATAIMMSCKRSIKANHYLNEAQARILLQDLAKCENPFNCPHGRPVLIHF 679 Query: 584 KLSDIEKLFGR 594 SD+E++F R Sbjct: 680 TNSDMERMFKR 690 >gi|70726617|ref|YP_253531.1| DNA mismatch repair protein [Staphylococcus haemolyticus JCSC1435] gi|68447341|dbj|BAE04925.1| DNA mismatch repair protein MutL [Staphylococcus haemolyticus JCSC1435] Length = 675 Score = 339 bits (869), Expect = 8e-91, Method: Composition-based stats. Identities = 121/404 (29%), Positives = 207/404 (51%), Gaps = 11/404 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA+S+ + + G S ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAKSTEINIEVEQSGISSIRVVDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + RH TSK+ DD +I T GFRGEAL SI +V+ +TL + + G Sbjct: 63 GIEQDDLDLVFHRHATSKLDADDDLFHIRTLGFRGEALASISSVAKVTLKTCT-DSENGH 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I +I S +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYAENGEILSRKPAKAKKGTDITVSSLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + + K N +G E +S++ G + V + +++ L+G+ Sbjct: 182 PYIRISLISDGKTLLKTN---GSGKTNEVMSEIYGIKVAKDLVHIQGDTSDYHLEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GRYP+ L +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFVLNKAIIEGYHTLLTIGRYPICYLNIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK-----KMISSFHQDNAPKTH 354 HP K +R + I++ I+ A + + + L + K+++ F Q Sbjct: 299 HPTKLEVRLSKEEQLYQLIVEKIRYAFKDRILIPQNDLDRTPKKNKVLNQFEQQKLDFER 358 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 + + + E++L +L +D N+ E Sbjct: 359 RQQNSNQDKTNSHYYGMSESKLQNPNLEKNDLDNNELINESTEN 402 Score = 197 bits (500), Expect = 5e-48, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 112/238 (47%), Gaps = 4/238 (1%) Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP---VEESEATHYQLGIACAQIHQN 416 S +++E + Q N + + ++ND V + + Q+H Sbjct: 437 ESTNDSEEVVTEQSNNDEASSKTYQTLYSKQDNNDIKGKVSNTPSRRVPYMEVVGQVHGT 496 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 YII+Q +G+ ++DQHAA ER+ +E R+ Q LL P + E +I ++ Sbjct: 497 YIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQDLLIPLTFHFSKDEQMIIDQY 556 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 ++L ++G+ E FG + + P K ++++D++ E++ + ++ E+ Sbjct: 557 QDELDKVGVHLEHFGGHDYIVNSYPVWFPKAEAEEIIQDMV-ELVLNDKKVNVKKMREDA 615 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M+C SI++ +++ EM L+ ++ + + C HGRP I ++EKLF R Sbjct: 616 AIMMSCKKSIKANHYLKNNEMADLIDQLREAEDPFTCPHGRPIIINFSNYELEKLFKR 673 >gi|237668724|ref|ZP_04528708.1| DNA mismatch repair protein MutL [Clostridium butyricum E4 str. BoNT E BL5262] gi|237657072|gb|EEP54628.1| DNA mismatch repair protein MutL [Clostridium butyricum E4 str. BoNT E BL5262] Length = 610 Score = 339 bits (869), Expect = 8e-91, Method: Composition-based stats. Identities = 123/340 (36%), Positives = 189/340 (55%), Gaps = 5/340 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L+E N+IAAGE++ERPS +KEL+ENS+DA S + I GG S +I D+G Sbjct: 3 RINILNEDTANKIAAGEVVERPSSVVKELVENSIDAASKNITIEIEDGGTSLIRIIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I A H TSKI S+D NI T GFRGEALPSI +V+ + L S+ + G Sbjct: 63 GVFKDDIKKAFMPHATSKITKSEDIYNISTLGFRGEALPSIASVAKVNLKSKTANSEYGY 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G K V N GTI+EVRDLFF +PAR FLKS E +LI D+I R+A+A Sbjct: 123 EINIEGGKFGDVYECGTNKGTIIEVRDLFFNVPARKKFLKSVSKEGSLINDIITRIALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF K+ N + + + + G+ +N + + S+ +T+ GY G Sbjct: 183 PDISFKLFNNHK---KVIHTFGNNDIKDTLRTIYGKSITDNIIYFEDSSDLVTIHGYVGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 RG+ N +F+N R +++K + + A+ + ++P VL +EI P VDVN+ Sbjct: 240 EDIARGSRNNQSIFVNKRYIKNKSLAVAVEQAFKSFSTVNKFPFFVLFVEIYPEYVDVNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK 339 HP K+ I+F + ++ I ++ ++ + ++ Sbjct: 300 HPTKAEIKFNDERMVFKKIFSAVHNSLKNDIFESFAIEED 339 Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 41/139 (29%), Positives = 65/139 (46%) Query: 379 NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 + L D T + + + + + Q ++ YI+ + L ++DQHAAHE++ Sbjct: 470 DQDLQKDSDTINYNEKVKYKEKIAKFPPISIIGQYNKTYILGEYDGTLYMIDQHAAHEKI 529 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 FEK +D S I Q L+ P IIDL + + E+ E G E FG +IA++ Sbjct: 530 YFEKYLKDIESGDIIVQPLMIPSIIDLTIDDYSYFEENKEIFKDAGFILEEFGGTSIALK 589 Query: 499 EIPAILSKKNIPQLLRDII 517 E+P L K N L + Sbjct: 590 EVPYFLGKLNPKNYLLKYL 608 >gi|296448879|ref|ZP_06890706.1| DNA mismatch repair protein MutL [Methylosinus trichosporium OB3b] gi|296253614|gb|EFH00814.1| DNA mismatch repair protein MutL [Methylosinus trichosporium OB3b] Length = 384 Score = 339 bits (869), Expect = 9e-91, Method: Composition-based stats. Identities = 139/345 (40%), Positives = 216/345 (62%), Gaps = 2/345 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+IR+L ++++IAAGE+IERP+ A+KEL+EN+LDA ++RV+ I GG+ ++ D+G Sbjct: 34 MRIRRLDPILVDRIAAGEVIERPASAVKELVENALDAGATRVDVAIEAGGRRLIRVVDDG 93 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 FGM E++ +AV+RH TSKI D D + I T GFRGEALPSI AV+ L + +R GA Sbjct: 94 FGMNLEDVALAVERHATSKIPDGDLTAIATLGFRGEALPSIAAVADLAIDTRARGAEMGA 153 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + ++R GT VE RDLF PARL FLKSE+ ET + DV++R++IA+ Sbjct: 154 HIRVEAGARRALRAGDWPKGTRVEARDLFAATPARLKFLKSERAETAAVADVVKRLSIAH 213 Query: 180 PKVSFTFSTIKSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V F FS + T R++Q +GE F NA+ ++ + + L G G Sbjct: 214 PAVRFGFSADIGQSFDHPACGETKEGLARRLAQALGEAFAANAIVVDAERAGVRLTGLAG 273 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 +PTF+R NA +V++NGR V+DK +R AY + + R+P + L ++ DPR VDVN Sbjct: 274 LPTFHRANAQMQFVYVNGRPVRDKLFAGAVRAAYLDFLSHDRHPALALFIDCDPRSVDVN 333 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS 343 VHPAK+ +RF +P ++R ++ ++++A+ ++ +++ ++ Sbjct: 334 VHPAKAEVRFADPGLVRGLVVGALKEALASALHRSADTPAREALA 378 >gi|269797933|ref|YP_003311833.1| DNA mismatch repair protein MutL [Veillonella parvula DSM 2008] gi|269094562|gb|ACZ24553.1| DNA mismatch repair protein MutL [Veillonella parvula DSM 2008] Length = 681 Score = 339 bits (869), Expect = 9e-91, Method: Composition-based stats. Identities = 130/426 (30%), Positives = 213/426 (50%), Gaps = 7/426 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L E IN+IAAGE++ERP+ IKELIENS+DA ++ +E I GG ++ +ITDNG Sbjct: 3 TIHVLDETTINKIAAGEVVERPASVIKELIENSIDASATNIEVEIGEGGVAYMRITDNGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ +A+ RH TSKI +D +I + GFRGEAL SI +VSH +L++R ++ G Sbjct: 63 GMTEEDARLAILRHATSKIQQVEDLFDIASLGFRGEALASIASVSHFSLITRKADSDLGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G + P PGT +E++DLF+ PAR FLK+E+ E + I D++ ++A++ Sbjct: 123 RITVDGGIFTDCIPYGAAPGTTIEIKDLFYNTPARRKFLKTERTEASKIQDIVGKLALSN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF NG+ + ++ + G ++ + +S+ I + G Sbjct: 183 PHISFKLIIDDR---VAIITPGNGDISDTVAALYGYKTKDDIFTVAYESDSIYIDGVVSK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT + + +N R + DK I+ I AY +P +P+VVL + + R VD+NV Sbjct: 240 PTLLKSTRIWQTIIVNNRVISDKTIMKAIDNAYHALLPKNGHPLVVLNITVPARMVDINV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP KS ++F + II + I A+N S ++ + + K + Sbjct: 300 HPRKSEVKFSDDKIIFKAVYHGILNALNNPLHERYERESSSYMTGTVDNISDKYGNDIAS 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 S +N K F + + T + +D ++ +E + + Sbjct: 360 NSDSNI--KNFSSNSTSLAGNTTYDSYQTPTVVHDSMQSAEHIATAIDYDKVFGGRRTKG 417 Query: 420 SQTTDG 425 + G Sbjct: 418 YEVMRG 423 Score = 172 bits (435), Expect = 2e-40, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 11/265 (4%) Query: 337 LSKKMISSFHQDNAPKTHLP-------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + + S F ++ K + P + ++ + + E + +T D+ ++ Sbjct: 420 VMRGETSQFVENLKTKGYTPPAPKATYEQSSFVDESFEAVPTAYTSYTTEDVEKFKSLSH 479 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 N+ VEE + Q+ YI+++ D L I+DQHAAHER+ ++K+ +S Sbjct: 480 DIRNEEVEERTIHNSGFLPM-GQVASCYILAKKGDDLYIIDQHAAHERVRYDKL--CKSS 536 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 I Q++L P+ + + E L+ E E L LG E GP I + P L + Sbjct: 537 ESIPMQSILVPQYNEATDDEMNLVEEEREILLDLGFDVELGGPTKIKLVGAPVDLVESKA 596 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 ++L+ + + D Q +LA +C G+I++G + +M L+ ++ Sbjct: 597 FEILQYVFSYLHDHQQPTKAQ-LRHEMLAYASCRGAIKAGHNLNMYQMTTLIEDLFSTEK 655 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT IK ++ KLF R Sbjct: 656 PYVCPHGRPTIIKFTPDELGKLFLR 680 >gi|225419752|ref|ZP_03762055.1| hypothetical protein CLOSTASPAR_06090 [Clostridium asparagiforme DSM 15981] gi|225041589|gb|EEG51835.1| hypothetical protein CLOSTASPAR_06090 [Clostridium asparagiforme DSM 15981] Length = 326 Score = 339 bits (869), Expect = 1e-90, Method: Composition-based stats. Identities = 112/326 (34%), Positives = 183/326 (56%), Gaps = 5/326 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + IN+IAAGE+IERP+ +KEL+EN++DA+++ V I GG + ++TDNG G Sbjct: 4 ITVLDQNTINKIAAGEVIERPASVVKELLENAIDAQATAVTIEIKEGGTTLIRVTDNGCG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++I +A RH TSKI +D + + GFRGEAL SI AV+ + L+++ + TG + Sbjct: 64 IPKDQISLAFLRHATSKIKSVEDLFTVSSLGFRGEALASIAAVAQVELITKTGDSLTGFR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + V GT R+LF+ PAR FLK E + D++ ++A+++P Sbjct: 124 YQIEGGTERGLEEVGAPDGTTFIARNLFYNTPARKKFLKRPVTEGAYVADLVEKIALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++S F N+ + S N N + + V G + N + ++ ++ +I + G+ G P Sbjct: 184 EISIRFIQNNQNKL---YTSGNHNLRDLVYTVYGREVTANLLPIDVQAQDIKVSGFIGKP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 RGN N FINGR ++ I I AY + +YP +L I+P +DVNVH Sbjct: 241 LIARGNRNYENYFINGRYIKSSIISRAIEEAYKPYMMQHKYPFTLLHFSIEPEFLDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAI 326 P K +RFR+ ++ ++ ++ +A+ Sbjct: 301 PTKMELRFRDGELMFKTVLNAVGEAL 326 >gi|154483534|ref|ZP_02025982.1| hypothetical protein EUBVEN_01238 [Eubacterium ventriosum ATCC 27560] gi|149735444|gb|EDM51330.1| hypothetical protein EUBVEN_01238 [Eubacterium ventriosum ATCC 27560] Length = 687 Score = 338 bits (868), Expect = 1e-90, Method: Composition-based stats. Identities = 124/354 (35%), Positives = 193/354 (54%), Gaps = 5/354 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + INQIAAGE+I+RP+ +KEL+EN++DA ++ + I GG S +ITDNG Sbjct: 3 KIHVLDQNTINQIAAGEVIDRPASIVKELMENAIDAGATMISVEIKDGGTSLIRITDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I +A RH TSKI D ++ + GFRGEAL SI +V + L+++ TG Sbjct: 63 GIEKDDIKVAFLRHATSKIKTALDLISVSSLGFRGEALSSIASVCQVELITKTEDAITGI 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G K + + GT V+++FF PAR FLK+ Q E I++++ ++A+++ Sbjct: 123 RYKIEGGKEVTFEEIGAPEGTTFIVKNIFFNTPARRKFLKTAQTEAGYISEIVEKIALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++S +F + S NGN + I + G D NN +E+N + I + GY G Sbjct: 183 PEISISFINNNQTKIH---TSGNGNLKDVIYNIYGRDIANNLLEINCSNEFIKMTGYIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 ++GN + FINGR +++ I I Y + +YP + EID +DVNV Sbjct: 240 AIISKGNRSFENYFINGRYIKNNIISKAIEDGYKFILMQHKYPFTAINFEIDQDLLDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 HPAK +RFR I FI+ SI + +K L+++ + AP+ Sbjct: 300 HPAKMELRFRKGEAIYPFIMDSIHDTLVEKPNIIKVELNEEKPNEEKIARAPEP 353 Score = 193 bits (491), Expect = 6e-47, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 99/185 (53%), Gaps = 1/185 (0%) Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q+ + Y I + + I+DQHAAHE+++FEK+ + +++SQ + P I++L E Sbjct: 502 VGQVFETYWIVEYDGKMYIIDQHAAHEKVMFEKLMDRLSKKEVSSQMINPPIILNLSLNE 561 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 LI ++ ++ +G + E FG A+R +PA L + +L IID + + + Sbjct: 562 ANLINKYMDNFKEIGFEIEAFGGQDFAVRAVPADLYTLDSYDVLMQIIDNLSNE-NGRMV 620 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 D I +A+M+C +++ KM + E N L+ ++ N C HGRPT I + +++ Sbjct: 621 PDMITEKIASMSCKAAVKGNNKMSTQEANALIDQLLSLENPYNCPHGRPTIISMSHYELD 680 Query: 590 KLFGR 594 K F R Sbjct: 681 KKFKR 685 >gi|15605304|ref|NP_220090.1| DNA mismatch repair protein [Chlamydia trachomatis D/UW-3/CX] gi|76789312|ref|YP_328398.1| DNA mismatch repair protein [Chlamydia trachomatis A/HAR-13] gi|237803004|ref|YP_002888198.1| DNA mismatch repair protein [Chlamydia trachomatis B/Jali20/OT] gi|237804926|ref|YP_002889080.1| DNA mismatch repair protein [Chlamydia trachomatis B/TZ1A828/OT] gi|255311394|ref|ZP_05353964.1| DNA mismatch repair protein [Chlamydia trachomatis 6276] gi|255317695|ref|ZP_05358941.1| DNA mismatch repair protein [Chlamydia trachomatis 6276s] gi|255348956|ref|ZP_05380963.1| DNA mismatch repair protein [Chlamydia trachomatis 70] gi|255503495|ref|ZP_05381885.1| DNA mismatch repair protein [Chlamydia trachomatis 70s] gi|8928218|sp|O84579|MUTL_CHLTR RecName: Full=DNA mismatch repair protein mutL gi|123606769|sp|Q3KLC2|MUTL_CHLTA RecName: Full=DNA mismatch repair protein mutL gi|3329017|gb|AAC68177.1| DNA Mismatch Repair [Chlamydia trachomatis D/UW-3/CX] gi|76167842|gb|AAX50850.1| MutL [Chlamydia trachomatis A/HAR-13] gi|231273226|emb|CAX10139.1| DNA mismatch repair protein [Chlamydia trachomatis B/TZ1A828/OT] gi|231274238|emb|CAX11032.1| DNA mismatch repair protein [Chlamydia trachomatis B/Jali20/OT] gi|296436109|gb|ADH18283.1| DNA mismatch repair protein [Chlamydia trachomatis G/9768] gi|296437037|gb|ADH19207.1| DNA mismatch repair protein [Chlamydia trachomatis G/11222] gi|296437969|gb|ADH20130.1| DNA mismatch repair protein [Chlamydia trachomatis G/11074] gi|297140470|gb|ADH97228.1| DNA mismatch repair protein [Chlamydia trachomatis G/9301] gi|297748705|gb|ADI51251.1| MutL [Chlamydia trachomatis D-EC] gi|297749585|gb|ADI52263.1| MutL [Chlamydia trachomatis D-LC] Length = 576 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 139/520 (26%), Positives = 246/520 (47%), Gaps = 14/520 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L +NQI+AGE+IE + +KELIENSLDA + + GGG+ + DNG Sbjct: 7 RIRLLDSVTVNQISAGEVIENAASVVKELIENSLDAGADEIHIETLGGGRGQIVVRDNGV 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM EE+P+A+QRH TSKI+ D ++ ++GFRGEALPSI ++S + + + G+ Sbjct: 67 GMDPEEVPVALQRHATSKIAHFADIFSLASYGFRGEALPSIASISKMEIHTARAG-GLGS 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I + P GT + V LF+ +P R +F KS Q++ I ++ ++ Sbjct: 126 KTLIEKGEPVCCEPAPRQQGTTIAVHSLFYNVPMRQSFQKSPQMDRLAIRRLLENSVLSS 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + +T+ S + + + F ER++ V+GE F+ A ++++ ++ + G+ G Sbjct: 186 EGIGWTWI---SECRQELYVAKKQGFIERVALVLGESFVQEAFFIDKQQGDLRVLGFLGS 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R +FIN R V+ FI + AYA IP RYP+ VL L + P D NV Sbjct: 243 PNQHRSTRQGQRLFINNRAVESSFISKKVAEAYAWMIPAQRYPIFVLKLFLPPMWCDFNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ +R I N ++++I +A+ ++ S + K +N + Sbjct: 303 HPQKTEVRLLQEGQISNLLVEAISEALLRRSPSLEETVLKVPTEKIPIENEGISVPSIRP 362 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 ++ + ++ + + V E LG + Sbjct: 363 AIVSAPLSCPTFSQQPYLKTEMATIVSRDSASSSLSVVEKVRFLTSLGKVL--------L 414 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + ++G+ +V AA + L + + + +++ QT L P + + + E + E Sbjct: 415 VEDSEGVHVVFVQAARKHLFYVSLLSERLESRLACQTFLLPSSVQMTKLEADFLQMRLEA 474 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 L LGI+ R P++ AI P + ++ + + + + E Sbjct: 475 LTALGIELSRISPDSFAIESAPPFIQEEELKEWIVALAQE 514 >gi|166154790|ref|YP_001654908.1| DNA mismatch repair protein [Chlamydia trachomatis 434/Bu] gi|166155665|ref|YP_001653920.1| DNA mismatch repair protein [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301336065|ref|ZP_07224309.1| DNA mismatch repair protein [Chlamydia trachomatis L2tet1] gi|238687392|sp|B0B8E9|MUTL_CHLT2 RecName: Full=DNA mismatch repair protein mutL gi|238687441|sp|B0BA28|MUTL_CHLTB RecName: Full=DNA mismatch repair protein mutL gi|165930778|emb|CAP04275.1| DNA mismatch repair protein [Chlamydia trachomatis 434/Bu] gi|165931653|emb|CAP07229.1| DNA mismatch repair protein [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 576 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 138/520 (26%), Positives = 247/520 (47%), Gaps = 14/520 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L +NQI+AGE+IE + +KELIENSLDA + + GGG+ + DNG Sbjct: 7 RIRLLDSVTVNQISAGEVIENAASVVKELIENSLDAGADEIHIETLGGGRGQIVVRDNGV 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM EE+P+A+QRH TSKI+ D ++ ++GFRGEALPSI ++S + + + G+ Sbjct: 67 GMDPEEVPVALQRHATSKIAHFADIFSLASYGFRGEALPSIASISKMEIHTARAG-GLGS 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I + P GT + V LF+ +P R +F KS Q++ I ++ ++ Sbjct: 126 KTLIEKGEPVCCEPAPRQQGTTIAVHSLFYNVPMRQSFQKSPQMDRLAIRRLLENSVLSS 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + +T+ + + + + F ER++ V+GE F+ A ++++ ++ + G+ G Sbjct: 186 EGIGWTWISERRQELHV---AKKQGFIERVALVLGESFVQEAFFIDKQQGDLRVLGFLGS 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R +FIN R V+ FI + AYA IP RYP+ VL L + P D NV Sbjct: 243 PNQHRSTRQGQRLFINNRAVESSFISKKVAEAYAWMIPAQRYPIFVLKLFLPPMWCDFNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ +R I N ++++I +A+ ++ S ++ K +N + Sbjct: 303 HPQKTEVRLLQEGQISNLLVEAISEALLRRSSSLEEIVLKVPTEKIPIENEGISVPSIRP 362 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 ++ + ++ + + V E LG + Sbjct: 363 AIVSAPLSCPTFSQQPYLKTEMATIVSRDSASSSLSVVEKVRFLTSLGKVL--------L 414 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + ++G+ +V AA + L + + + +++ QT L P + + + E + E Sbjct: 415 VEDSEGVHVVFVQAARKHLFYVSLLSERLESRLACQTFLLPPSVQMTKLEADFLQMRLEA 474 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 L LGI+ R P++ AI P + ++ + + + + E Sbjct: 475 LTALGIELSRISPDSFAIESAPPFIQEEELKEWIVALAQE 514 >gi|149011044|ref|ZP_01832349.1| DNA mismatch repair protein [Streptococcus pneumoniae SP19-BS75] gi|147764680|gb|EDK71610.1| DNA mismatch repair protein [Streptococcus pneumoniae SP19-BS75] Length = 420 Score = 338 bits (867), Expect = 2e-90, Method: Composition-based stats. Identities = 119/356 (33%), Positives = 198/356 (55%), Gaps = 5/356 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF+ + + + G + I+ + G +E+ + + G+ +P Sbjct: 184 EISFSLISDGKEMTR---TAGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +FINGR +++ + I + + +GR+P+ V+ + IDP DVNVH Sbjct: 241 ELTRANRNYISLFINGRYIKNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 P K +R + + ++I ++ ++ + ++ + + +++ +T LP Sbjct: 301 PTKQEVRISKEKELMTLVSEAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILP 356 >gi|255280935|ref|ZP_05345490.1| DNA mismatch repair protein MutL [Bryantella formatexigens DSM 14469] gi|255268383|gb|EET61588.1| DNA mismatch repair protein MutL [Bryantella formatexigens DSM 14469] Length = 743 Score = 338 bits (867), Expect = 2e-90, Method: Composition-based stats. Identities = 128/405 (31%), Positives = 210/405 (51%), Gaps = 9/405 (2%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M+ I L E+ I++IAAGE+IERP+ +KEL+EN++DA ++ V I GG S +ITDN Sbjct: 1 MREIAVLDEQTIDKIAAGEVIERPASIVKELVENAIDAGANAVTVEIKDGGISLIRITDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++++P+A RH TSKI DD ++ + GFRGEAL SI AV + L+++ + T Sbjct: 61 GSGIEAKQVPVAFWRHATSKIRKADDLLDVTSLGFRGEALSSIAAVCQVELITKTADSLT 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G K S+ + GT VR++F+ PAR FLK+ Q E I+D++ R+A+ Sbjct: 121 GVRYLIEGGKEKSLEEIGAPDGTTFLVRNIFYNTPARKKFLKTAQTEAGYISDMVERIAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P+VSF F + S N + I + G D N +E++ ++ + + G+ Sbjct: 181 SHPEVSFKFIANNQTKLH---TSGNHQLKDIIYHIYGRDIAANLIEISAGTDSVRINGFI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P +RGN N F+NGR ++ I I AY + +YP VL ID + +DV Sbjct: 238 GKPVISRGNRNYENYFVNGRYIRSNIIAKAIEDAYHTFMMKHKYPFTVLNFTIDGKLLDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RF + + ++++ A+ + + + K+ + PK LP Sbjct: 298 NVHPAKLELRFAENEEMYRIVYEAVRNALTHREMIVQVGIGKEEA---QKKETPKGRLPA 354 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 + ++E + P + ++ + Sbjct: 355 PEPFEAVRRSLSQVRERPAYAKETAPGTAAAMQTASRRADDVDRM 399 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 1/249 (0%) Query: 346 HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 + + + P+ + Q + N + + H + Sbjct: 494 EEAASGNSAQPEAPATGNPVQAEKSASGNSAQPEAPAAGVTGEQMSLFEDDKLLSKEHVK 553 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 Q+ Y I Q D L ++DQHAAHE++++E+M++ + TSQ L P I+ L Sbjct: 554 EHRIIGQVFDTYWIVQFKDKLFLIDQHAAHEKVLYERMKKSMEKREFTSQLLNPPVILTL 613 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 E L+ ++ E +G + E FG A+R +P L L +++D + + Sbjct: 614 SMAEEELLKKYQERFREIGFEIEEFGGREYALRAVPDNLFGLADKDLFLEMLDGLSAQTD 673 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 +++ I++ +ATM+C +++ ++ + E++ L+ E+ N C HGRPT I + Sbjct: 674 ALSIET-IDDKIATMSCKAAVKGNSRLSTAEIHALIDELLTLENPYNCPHGRPTIISMSK 732 Query: 586 SDIEKLFGR 594 +IE+ F R Sbjct: 733 YEIERKFKR 741 >gi|332685818|ref|YP_004455592.1| DNA mismatch repair protein MutL [Melissococcus plutonius ATCC 35311] gi|332369827|dbj|BAK20783.1| DNA mismatch repair protein MutL [Melissococcus plutonius ATCC 35311] Length = 735 Score = 338 bits (866), Expect = 2e-90, Method: Composition-based stats. Identities = 123/376 (32%), Positives = 208/376 (55%), Gaps = 19/376 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN++DA ++++ +I G Q+ DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELMENAIDAGGTQIDILIEEAGLKKIQVVDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P A +RH TSKI DD I + GFRGEALPSI +VS +TL + G+ Sbjct: 63 GIAKDDVPNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSISSVSEVTLETAVSNETEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + G KI R + GT + V +LFF PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 FIYLKGGKIMEHRSSTLRKGTKIVVSNLFFNTPARLKYVKTIQTELASIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P ++F+ + + KM + G + I+ + G + + K + +L GY + Sbjct: 183 PSIAFSLTHDGN---KMMHTTGKGELKQTIAGIYGVSIAKKMITIQAKDLDFSLTGYISL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N + +NGR +++ + I Y + +GRYP+ +L + IDP +DVNV Sbjct: 240 PEVTRASRNYLSIIVNGRYIKNFILSKAILEGYGSKLMVGRYPIAILEISIDPLLIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV--------------LSKKMISSF 345 HP K +R + + Q+I +A++++ + ++V + + +SSF Sbjct: 300 HPTKQEVRLSKEKELVQLVHQAIHEALSQEQLIPNAVENLTFKKKIEKPDKVEQLNLSSF 359 Query: 346 HQDNAPKTHLPKYATS 361 ++ A + LP S Sbjct: 360 EKEQAKNSSLPSSKKS 375 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 3/230 (1%) Query: 367 EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES--EATHYQLGIACAQIHQNYIISQTTD 424 E F +++ ++ + E+ + + Q+H Y+ +Q +D Sbjct: 502 ENYFSEKHATHLGNINNKNSIKTIHTEQETTETLNQKNRFPDLEYFGQMHGTYLFAQGSD 561 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 GL I+DQHAA ER+ +E R+ Q LL P IID + I E + L +G Sbjct: 562 GLYILDQHAAQERINYEYFREKIGEVTDDLQELLVPLIIDYPNTDVLKIKEKKDKLKDVG 621 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 I E F N+ +R P ++R++ID ++ + +++ E M+C Sbjct: 622 IYLEDFDQNSFIVRSHPTWYPSGEEESIIREMIDILLTTGNI-SVKKFREETAIMMSCKQ 680 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +I++ + + LL ++ N C HGRP + SD+EK+F R Sbjct: 681 AIKANHFLNEKQARSLLEKLATCENPFNCPHGRPVLVHFTNSDMEKMFKR 730 >gi|167837738|ref|ZP_02464621.1| DNA mismatch repair protein [Burkholderia thailandensis MSMB43] Length = 345 Score = 338 bits (866), Expect = 2e-90, Method: Composition-based stats. Identities = 122/323 (37%), Positives = 191/323 (59%), Gaps = 9/323 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + Sbjct: 90 IPADELPLALTRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFVTSRTEDAAHATR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + V P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 150 I---DAQTGVVAPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++ + N R+++++G+ F + L+E++ + + G G+P Sbjct: 207 DIAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVH Sbjct: 263 TASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVH 322 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQ 323 P+K +RFR+ I F+ ++Q Sbjct: 323 PSKIEVRFRDSRSIHQFVFHAVQ 345 >gi|182419526|ref|ZP_02950776.1| DNA mismatch repair protein MutL [Clostridium butyricum 5521] gi|182376613|gb|EDT74187.1| DNA mismatch repair protein MutL [Clostridium butyricum 5521] Length = 686 Score = 338 bits (866), Expect = 2e-90, Method: Composition-based stats. Identities = 123/340 (36%), Positives = 189/340 (55%), Gaps = 5/340 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L+E N+IAAGE++ERPS +KEL+ENS+DA S + I GG S +I D+G Sbjct: 3 RINILNEDTANKIAAGEVVERPSSVVKELVENSIDAASKNITIEIEDGGTSLIRIIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I A H TSKI S+D NI T GFRGEALPSI +V+ + L S+ + G Sbjct: 63 GVFKDDIKKAFMPHATSKITKSEDIYNISTLGFRGEALPSIASVAKVNLKSKTANSEYGY 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G K V N GTI+EVRDLFF +PAR FLKS E +LI D+I R+A+A Sbjct: 123 EINIEGGKFGDVYECGTNKGTIIEVRDLFFNVPARKKFLKSVSKEGSLINDIITRIALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF K+ N + + + + G+ +N + + S+ +T+ GY G Sbjct: 183 PDISFKLFNNHK---KVIHTFGNNDIKDTLRTIYGKSITDNIIYFEDSSDLVTIHGYVGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 RG+ N +F+N R +++K + + A+ + ++P VL +EI P VDVN+ Sbjct: 240 EDIARGSRNNQSIFVNKRYIKNKSLAVAVEQAFKSFSTVNKFPFFVLFVEIYPEYVDVNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK 339 HP K+ I+F + ++ I ++ ++ + ++ Sbjct: 300 HPTKAEIKFNDERMVFKKIFSAVHNSLKNDIFESFAIEED 339 Score = 194 bits (494), Expect = 3e-47, Method: Composition-based stats. Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 1/216 (0%) Query: 379 NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 + L D T + + + + + Q ++ YI+ + L ++DQHAAHE++ Sbjct: 470 DQDLQKDSDTINYNEKVKYKEKIAKFPPISIIGQYNKTYILGEYDGTLYMIDQHAAHEKI 529 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIR 498 FEK +D S I Q L+ P IIDL + + E+ E G E FG +IA++ Sbjct: 530 YFEKYLKDIESGDIIVQPLMIPSIIDLTIDDYSYFEENKEIFKDAGFILEEFGGTSIALK 589 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 E+P L K N +L +I+D + + T + + I AT AC +I+ ++Q EM Sbjct: 590 EVPYFLGKLNPKKLFIEILDNLKNLGNGKTTEVKHNAI-ATKACKSAIKGNDELQINEMV 648 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +L+ ++ + C HGRP IK +DI+K F R Sbjct: 649 KLIEDLRYIDDPFHCPHGRPIIIKFTSTDIDKKFKR 684 >gi|312438323|gb|ADQ77394.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus TCH60] Length = 388 Score = 338 bits (866), Expect = 2e-90, Method: Composition-based stats. Identities = 115/380 (30%), Positives = 202/380 (53%), Gaps = 8/380 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS--VLSKKMISSFHQDNAPKTHLPK 357 HP K +R + I+ IQ+A + + + K I + N K++L K Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKIKCYIHSNNKKSNLNK 358 Query: 358 YATSLTNTQEKLFLQENRLS 377 T N + + L++ +S Sbjct: 359 DKTQRINKRRRFHLKKVTVS 378 >gi|313618993|gb|EFR90827.1| DNA mismatch repair protein MutL [Listeria innocua FSL S4-378] Length = 331 Score = 338 bits (866), Expect = 2e-90, Method: Composition-based stats. Identities = 124/328 (37%), Positives = 191/328 (58%), Gaps = 6/328 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHLTL + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLTLETST-GETKGTT 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF FS + + NG+ + I+ + G ++ + +S + + GY +P Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGVSIARKSIPVKAESLDFKISGYAVLP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 NR N N INGR +++ ++ I+ Y +P+GR+P++VL +E+DP VDVNVH Sbjct: 241 EVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVLQIEMDPIIVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINK 328 PAK +R + I Q I+ A ++ Sbjct: 301 PAKLEVRLSKEKELGQLISQMIKDAFHQ 328 >gi|284024289|ref|ZP_06378687.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus 132] gi|304381139|ref|ZP_07363792.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|172087939|emb|CAQ35205.1| truncated DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] gi|304340122|gb|EFM06063.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|329727828|gb|EGG64279.1| DNA mismatch repair protein, C-terminal domain protein [Staphylococcus aureus subsp. aureus 21189] Length = 388 Score = 337 bits (863), Expect = 5e-90, Method: Composition-based stats. Identities = 114/380 (30%), Positives = 201/380 (52%), Gaps = 8/380 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS--VLSKKMISSFHQDNAPKTHLPK 357 HP K +R + I+ IQ+A + + + K I + N K++L K Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKIKYYIHSNNKKSNLNK 358 Query: 358 YATSLTNTQEKLFLQENRLS 377 T + + L++ +S Sbjct: 359 DKTQRITKRRRFHLKKVTVS 378 >gi|172087937|emb|CAQ35204.1| truncated DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] gi|172087941|emb|CAQ35206.1| truncated DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] gi|312829690|emb|CBX34532.1| DNA mismatch repair protein mutL. domain protein [Staphylococcus aureus subsp. aureus ECT-R 2] Length = 388 Score = 337 bits (863), Expect = 5e-90, Method: Composition-based stats. Identities = 114/380 (30%), Positives = 201/380 (52%), Gaps = 8/380 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS--VLSKKMISSFHQDNAPKTHLPK 357 HP K +R + I+ IQ+A + + + K I + N K++L K Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKIKYYIHSNNKKSNLNK 358 Query: 358 YATSLTNTQEKLFLQENRLS 377 T + + L++ +S Sbjct: 359 DKTQRITKRRRFHLKKVTVS 378 >gi|307292184|ref|ZP_07572049.1| DNA mismatch repair protein [Enterococcus faecalis TX0411] gi|306496759|gb|EFM66311.1| DNA mismatch repair protein [Enterococcus faecalis TX0411] Length = 710 Score = 336 bits (862), Expect = 5e-90, Method: Composition-based stats. Identities = 136/435 (31%), Positives = 224/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQTIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D PV + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPVSSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 200 bits (508), Expect = 6e-49, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS-----LTNTQEKLFLQENRLSTN 379 A + S + S+ Q A +T + + + S + +++F +E +L Sbjct: 429 AYETSSATVDSANHWETASNEQQVIAEETKITEVSDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|256960506|ref|ZP_05564677.1| MutL [Enterococcus faecalis Merz96] gi|293385299|ref|ZP_06631115.1| DNA mismatch repair protein HexB [Enterococcus faecalis R712] gi|293389688|ref|ZP_06634132.1| DNA mismatch repair protein HexB [Enterococcus faecalis S613] gi|312906650|ref|ZP_07765650.1| DNA mismatch repair protein [Enterococcus faecalis DAPTO 512] gi|312910890|ref|ZP_07769725.1| DNA mismatch repair protein, C-terminal domain protein [Enterococcus faecalis DAPTO 516] gi|256951002|gb|EEU67634.1| MutL [Enterococcus faecalis Merz96] gi|291077499|gb|EFE14863.1| DNA mismatch repair protein HexB [Enterococcus faecalis R712] gi|291080935|gb|EFE17898.1| DNA mismatch repair protein HexB [Enterococcus faecalis S613] gi|310627298|gb|EFQ10581.1| DNA mismatch repair protein [Enterococcus faecalis DAPTO 512] gi|311288758|gb|EFQ67314.1| DNA mismatch repair protein, C-terminal domain protein [Enterococcus faecalis DAPTO 516] Length = 710 Score = 336 bits (862), Expect = 5e-90, Method: Composition-based stats. Identities = 137/435 (31%), Positives = 225/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D PV + T Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPVSSAPETVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 200 bits (508), Expect = 6e-49, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS-----LTNTQEKLFLQENRLSTN 379 A + S + S+ Q A +T + K + S + +++F +E +L Sbjct: 429 AYETSSAAVDSANHWETSSNEQQIIAKETKVTKVSDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|307243917|ref|ZP_07526042.1| DNA mismatch repair protein, C-terminal domain protein [Peptostreptococcus stomatis DSM 17678] gi|306492739|gb|EFM64767.1| DNA mismatch repair protein, C-terminal domain protein [Peptostreptococcus stomatis DSM 17678] Length = 686 Score = 336 bits (862), Expect = 5e-90, Method: Composition-based stats. Identities = 128/400 (32%), Positives = 214/400 (53%), Gaps = 6/400 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + IN+IAAGE+IERPS IKE++ENSLDA + + I GK ++ D+G Sbjct: 3 RINILDDSTINKIAAGEVIERPSSIIKEVVENSLDAGAKNITIQIENAGKDMIKVIDDGA 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++I A RH TSKI +D SN+H+ GFRGEAL SI A+S + ++++ G Sbjct: 63 GIEADDINKAFLRHATSKIRRAEDLSNLHSLGFRGEALASIAAISKVDMVTKTEDALMGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I+G KI S P+ N GT + V+DLF+ +PAR FLKS E ITD++ ++AI Sbjct: 123 RILINGGKIESKNPIGANRGTQLIVKDLFYNVPARRKFLKSNHAEIINITDLVNKLAIGN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VS + ++ + N I + G+D ++ ++++ +S+ + GY Sbjct: 183 PGVSIKYINNGKTIFETI---GDSNLYNAIRMIYGKDTSDHLIKIDYQSSYYKIDGYIAN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R N N +FINGR V+ I++ I +AY + IP+ +YPV + LEIDP ++DVN+ Sbjct: 240 NNVYRSNRNNQLIFINGRYVKSPNIMNAINSAYKDIIPINKYPVYFINLEIDPGKIDVNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT-HLPKY 358 HP+K ++F N I + ++ + K + + ++ + ++ Y Sbjct: 300 HPSKLEVKFDNEGPILEDLGDYVRGTLLKNSLIGRYRSKDRPAKTYESNETFRSFDSFSY 359 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 + + L + + + S P + + + ++E Sbjct: 360 SKNEQKENSDLVRENGKSAFISEDDSGKPGHIDCKNSIQE 399 Score = 194 bits (494), Expect = 3e-47, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 3/199 (1%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 S ++ + YI+ +D L ++DQHAAHER+ FE + F S I Q LL Sbjct: 486 STRPEFEGLNYIGIVFNTYILFSKSDQLYMMDQHAAHERVRFEMYMKSFKSDSIRIQYLL 545 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P I+DL + + + + + R G E FG I++R +P + + + ++ID Sbjct: 546 DPIIMDLSPTDMEVAIRNIDLFERYGFIVEAFGHKNISVRGLPNTFGRPESEKFIYELID 605 Query: 519 EIIDSSTTYTLQDRIENI---LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 + +D + ++ +A MAC +I++ K+ E+ LL ++K N C H Sbjct: 606 KFLDLDKSSKRDSIYDSKYDQIAEMACKSAIKANDKLDYNEVMALLESLKKCDNPYTCPH 665 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRP + + DIEK+F R Sbjct: 666 GRPVMVSMTKYDIEKMFKR 684 >gi|227554584|ref|ZP_03984631.1| DNA mismatch repair protein [Enterococcus faecalis HH22] gi|227176261|gb|EEI57233.1| DNA mismatch repair protein [Enterococcus faecalis HH22] Length = 710 Score = 336 bits (862), Expect = 5e-90, Method: Composition-based stats. Identities = 136/435 (31%), Positives = 223/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+KLSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQKLSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 201 bits (512), Expect = 3e-49, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQ---DNAPKTHLPKYATSLTNTQ--EKLFLQENRLSTN 379 A + S + S+ Q + T +P SL +++ +++F +E +L Sbjct: 429 AYETSSAAADSANHWETASNEQQVIAEETKITEVPDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|172087929|emb|CAQ35200.1| truncated DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] Length = 388 Score = 336 bits (862), Expect = 6e-90, Method: Composition-based stats. Identities = 114/380 (30%), Positives = 201/380 (52%), Gaps = 8/380 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + +I + +P GT + V LF+ PARL ++KS E ITD++ RMA+++ Sbjct: 122 EIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + + N +G E ++++ G + V ++ +++ ++G+ Sbjct: 182 PDIRIALISDGKTMLSTN---GSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAK 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R N + +FINGR +++ + I Y + +GR+P+ + +E+DP VDVNV Sbjct: 239 PEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS--VLSKKMISSFHQDNAPKTHLPK 357 HP K +R + I+ IQ+A + + + K I + N K++L K Sbjct: 299 HPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKIKCYIHSNNKKSNLNK 358 Query: 358 YATSLTNTQEKLFLQENRLS 377 T + + L++ +S Sbjct: 359 DKTQRITKRRRFHLKKVTVS 378 >gi|257420393|ref|ZP_05597383.1| DNA mismatch repair protein hexB [Enterococcus faecalis X98] gi|257162217|gb|EEU92177.1| DNA mismatch repair protein hexB [Enterococcus faecalis X98] gi|315154584|gb|EFT98600.1| DNA mismatch repair protein [Enterococcus faecalis TX0043] Length = 710 Score = 336 bits (862), Expect = 6e-90, Method: Composition-based stats. Identities = 137/435 (31%), Positives = 225/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D PV + T Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPVSSAPETVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 200 bits (509), Expect = 5e-49, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS-----LTNTQEKLFLQENRLSTN 379 A + S + S+ Q A +T + + + S + +++F +E +L Sbjct: 429 AYETSSAAVDSANHWETASNEQQIIAKETKITEVSDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSATSQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|325283793|ref|YP_004256334.1| DNA mismatch repair protein mutL [Deinococcus proteolyticus MRP] gi|324315602|gb|ADY26717.1| DNA mismatch repair protein mutL [Deinococcus proteolyticus MRP] Length = 557 Score = 336 bits (861), Expect = 7e-90, Method: Composition-based stats. Identities = 140/601 (23%), Positives = 248/601 (41%), Gaps = 73/601 (12%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L ++ QIAAGE++ RP ++EL+EN+LDA ++R+E + GGG + DNG G Sbjct: 7 IRLLPPEVARQIAAGEVVSRPLDVLRELLENALDAGATRLEIEVEGGGLRRVAVRDNGRG 66 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + + E+ +A RH TSK+ + T GFRGEAL + LTL++RP GA + Sbjct: 67 IPAGEVGLAPLRHATSKLPGGLDEVSTLGFRGEALWAAAQAGTLTLLTRPA-AQVGATLL 125 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + V + GT V LF +PARL E + ++ R + +P++ Sbjct: 126 TAQGDAVEVARASAPAGTTAAVEGLFAAMPARLRAQAPAAAEVREMVALLGRYVLHHPEL 185 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 S+ + ++ G+F ++ V G N + + G P Sbjct: 186 SWRLAVDG----EIRLGHAPGDFRGGVATVYGPVSANRVLAVEAAGIA----GVISRPEL 237 Query: 243 NRGNANQFYVFINGRTVQDKF-ILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 R ++ + +NGR VQ + + Y E +P G P+ VL L + P + + N+HP Sbjct: 238 TRARRDRLHFAVNGRPVQPPADLEEAVLAGYGELLPSGAAPLTVLNLSVPPAEHNPNIHP 297 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 +K + + + ++ +A+ + + P P Sbjct: 298 SKQLVALAELPALAEQVRAAVAQALAGV----------PHVRALPDLRVPAESAPGAVQD 347 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 ++ F + + Y++++ Sbjct: 348 PAELRQGTFPE----------------------------------MRLLGVYQELYLLAE 373 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 + L ++D HAAHER ++E++++ + L PE++ L + A + E L Sbjct: 374 SEGDLWVIDGHAAHERALYERLQRGVAE--LPPFELPAPELLHLTPEQAARLEERAAALA 431 Query: 482 RLGIKAERFGPNAI-----AIREIPAILSKKNIPQL---LRDIIDEIIDSSTTYTLQDRI 533 G+ E FG + +R +PA L+ + L + DI + D+ Sbjct: 432 AWGLVIEPFGAGPVGGRLARLRSLPASLAALPVADLNAHVVDIA--LGDTDDPQ------ 483 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 +LA +AC ++++GR + +L + + C HGRPT ++L D+ FG Sbjct: 484 RTLLARLACLPALKAGR-LDDQNGAEVLAMLAQCSQPWACPHGRPTTLRLSERDLAHTFG 542 Query: 594 R 594 R Sbjct: 543 R 543 >gi|315167037|gb|EFU11054.1| DNA mismatch repair protein [Enterococcus faecalis TX1341] Length = 710 Score = 336 bits (861), Expect = 7e-90, Method: Composition-based stats. Identities = 136/435 (31%), Positives = 224/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D PV + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPVSSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 200 bits (508), Expect = 7e-49, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS-----LTNTQEKLFLQENRLSTN 379 A + S + S+ Q A +T + + + S + +++F +E +L Sbjct: 429 AYETSSATVDSENHWETASNEQQVIAEETKITEVSDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|221068566|ref|ZP_03544671.1| DNA mismatch repair protein MutL [Comamonas testosteroni KF-1] gi|220713589|gb|EED68957.1| DNA mismatch repair protein MutL [Comamonas testosteroni KF-1] Length = 742 Score = 336 bits (861), Expect = 7e-90, Method: Composition-based stats. Identities = 121/385 (31%), Positives = 206/385 (53%), Gaps = 7/385 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ ++EL++N+LD+ + ++ + GG + D+G Sbjct: 28 PIRDLPDELISQIAAGEVVERPASVVRELVDNALDSGAGQITVRLLAGGVRLIAVEDDGC 87 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A++RH TSKISD D + T GFRGEAL +I +VS ++ SRP ++ Sbjct: 88 GIPRDELPVALRRHATSKISDLHDLETVATMGFRGEALAAIASVSETSIFSRPAGQDSAY 147 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ RP A N GT VEV++LFF+ PAR FLK++ E + +RR A+A Sbjct: 148 LLDARSGEL---RPAARNQGTTVEVKELFFSTPARRKFLKTDATELAHCIESVRRHALAR 204 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P V F + + + R++ V+ + F++N+V ++ + + + G Sbjct: 205 PDVGFAIWHEGKLVEQWRAAGSTPDEALSRRLADVLNDKFVDNSVAVDHWAGPVHVTGRA 264 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 GIP R +Q + ++NGR V+DK + R+AY + + + PV L +EIDP +VDV Sbjct: 265 GIPDAARSRPDQQFCYVNGRFVRDKVLTHAARSAYEDVLHGNKQPVYALYIEIDPARVDV 324 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RFR+ + + +I+ A+ + + + + T P Sbjct: 325 NVHPTKIEVRFRDSREVHQAVRHAIENALATPRAAAVVEAAAQEAARQPGLIDESTATPV 384 Query: 358 YATSLTNTQEKLFLQENRLSTNDLL 382 A + T + R+S + Sbjct: 385 PAKAATKPAAAPAWPQTRMSFGEPA 409 Score = 214 bits (544), Expect = 4e-53, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 134/262 (51%), Gaps = 6/262 (2%) Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 L SS+ Q AP + + + R + +P+ Sbjct: 481 LRPSGQSSYFQRKAPAPRMQEAPAATVIVAATPPSATARPTAEAAMPAAVAPQQPATAAA 540 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN----STKI 452 + A + LG A AQ+H YI+++ + G+VIVD HAAHER+++E+++ N +I Sbjct: 541 D--SAPVWPLGRAVAQLHGVYILAENSQGMVIVDMHAAHERIVYEQLKNAVNTENGDQQI 598 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 SQ LL P E A H E L LG++ F P +A+R +PA L++ + +L Sbjct: 599 PSQPLLIPATFAATPEEVATAEAHAETLLILGMEVSPFSPKTLAVRAVPATLAQGDAVEL 658 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 R ++ E+ + +Q ILATMAC+G++R+ RK+ EMN LLR+ME S Q Sbjct: 659 ARSVLAELAQHDASTVVQRARNEILATMACHGAVRANRKLTLDEMNALLRQMEVTERSDQ 718 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 CNHGRPT+ +L + +++ LF R Sbjct: 719 CNHGRPTWRQLSMKELDALFLR 740 >gi|56752322|ref|YP_173023.1| DNA mismatch repair protein [Synechococcus elongatus PCC 6301] gi|81300589|ref|YP_400797.1| DNA mismatch repair protein [Synechococcus elongatus PCC 7942] gi|56687281|dbj|BAD80503.1| DNA mismatch repair protein MutL [Synechococcus elongatus PCC 6301] gi|81169470|gb|ABB57810.1| DNA mismatch repair protein MutL [Synechococcus elongatus PCC 7942] Length = 541 Score = 336 bits (861), Expect = 8e-90, Method: Composition-based stats. Identities = 143/596 (23%), Positives = 255/596 (42%), Gaps = 76/596 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L + ++AAGE+I+ + ++EL ENSLDA + R+ + + ++ D+G Sbjct: 6 TIQPLPAPWVARMAAGEVIDSLAAVVRELCENSLDAGTQRLVIDLW-PEQWRVRVADDGM 64 Query: 62 GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 G++ E + +A H +SK+S D GFRGEAL S+ + LT+ SR G QI Sbjct: 65 GLSLENLQLAALAHTSSKLSPDRFTAEQLGFRGEALHSLARLGRLTIASRTADAAAGWQI 124 Query: 122 AISG-EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + P+A+ PG IVEV+ LF R S + + I+ + +A+P Sbjct: 125 SYDIGGQPQVATPIAIAPGCIVEVQQLFQDWLERRQSQPSPAQQLRAVQQQIQNLVLAHP 184 Query: 181 KVSFTFSTIKSNRYKM-NFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++ + + + D+ + +++L + LQ G+ Sbjct: 185 SITVQVTQNDRPWLAFAPVHHPQERLLQLLPNTSPADWRSQSLDLGSEG---QLQVVVGL 241 Query: 240 P-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P +R + V +NGR V+ + + A ++P R+PVV L++ P QVD + Sbjct: 242 PDRCHRRRPDWVKVAVNGRVVRVSELEQAMIGALHRSLPRDRFPVVFAHLQVPPSQVDWH 301 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 HPAK+ + ++ + I ++I + + + + + T L + Sbjct: 302 RHPAKAELFLQDLPVWCERIQEAIAQTL-------------PLDPAEEIELPASTALLRV 348 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 A + + E A AQ+ Y+ Sbjct: 349 AETTGSYSESPS-----------------------------------HLRAIAQVLNTYV 373 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +++ D L +++QH AHER++FE+++ D+ LL+ L +E Sbjct: 374 LAEQGDSLWLIEQHIAHERVLFEQLQDDWQLVACQQPILLSK-----------LSLEQRL 422 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L RLGI AE FG + AIR IPA L+++ D+++ +++ S + L A Sbjct: 423 QLDRLGITAEDFGEDLWAIRHIPAALAQRE------DLVEALLELSRGWDLS----AAQA 472 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC +IR+G + E L+ + C HGRP + L + + + F R Sbjct: 473 AIACRTAIRNGTLLYPEEQQTLIDRWQHCRQPRTCPHGRPIALVLPETSLARYFRR 528 >gi|256618084|ref|ZP_05474930.1| MutL [Enterococcus faecalis ATCC 4200] gi|256597611|gb|EEU16787.1| MutL [Enterococcus faecalis ATCC 4200] gi|315031847|gb|EFT43779.1| DNA mismatch repair protein [Enterococcus faecalis TX0017] Length = 710 Score = 336 bits (861), Expect = 9e-90, Method: Composition-based stats. Identities = 136/435 (31%), Positives = 224/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D PV + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPVSSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 199 bits (507), Expect = 8e-49, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS-----LTNTQEKLFLQENRLSTN 379 A + S + S+ Q A +T + + + S + +++F +E +L Sbjct: 429 AYETSSATVDSENHWETASNEQQVIAEETKITEVSDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPIERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|227517231|ref|ZP_03947280.1| DNA mismatch repair protein [Enterococcus faecalis TX0104] gi|227075328|gb|EEI13291.1| DNA mismatch repair protein [Enterococcus faecalis TX0104] Length = 710 Score = 335 bits (860), Expect = 9e-90, Method: Composition-based stats. Identities = 136/435 (31%), Positives = 224/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D PV + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPVSSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 200 bits (508), Expect = 7e-49, Method: Composition-based stats. Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 9/269 (3%) Query: 334 SSVLSKKMISSFHQ---DNAPKTHLPKYATSLTNTQ--EKLFLQENRLSTN---DLLPSD 385 S + S+ Q + T +P SL +++ +++F +E +L + S Sbjct: 438 DSANHWETASNEQQIIAEETKITEVPDSEPSLRSSEAADEVFQEEMKLHPEFDANSAASQ 497 Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 N EE + Q+H Y+ +Q+ DGL I+DQHAA ER+ +E R+ Sbjct: 498 RELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQERIKYEYFRE 557 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 Q LL P +ID + I E E L +GI E FG N+ +R P Sbjct: 558 KIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFIVRAHPTWYP 617 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 ++R++ID ++ + + +++ E M+C SI++ + + LL+++ Sbjct: 618 AGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQARVLLKDLA 676 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N C HGRP I SD+E++F R Sbjct: 677 LCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|15618721|ref|NP_225007.1| DNA mismatch repair protein [Chlamydophila pneumoniae CWL029] gi|15836345|ref|NP_300869.1| DNA mismatch repair protein [Chlamydophila pneumoniae J138] gi|16752228|ref|NP_445596.1| DNA mismatch repair protein [Chlamydophila pneumoniae AR39] gi|33242172|ref|NP_877113.1| DNA mismatch repair protein [Chlamydophila pneumoniae TW-183] gi|8928240|sp|Q9Z794|MUTL_CHLPN RecName: Full=DNA mismatch repair protein mutL gi|4377124|gb|AAD18950.1| DNA Mismatch Repair [Chlamydophila pneumoniae CWL029] gi|7189973|gb|AAF38832.1| DNA mismatch repair protein mutL [Chlamydophila pneumoniae AR39] gi|8979186|dbj|BAA99020.1| DNA mismatch repair [Chlamydophila pneumoniae J138] gi|33236683|gb|AAP98770.1| MutL [Chlamydophila pneumoniae TW-183] Length = 580 Score = 335 bits (860), Expect = 9e-90, Method: Composition-based stats. Identities = 156/549 (28%), Positives = 264/549 (48%), Gaps = 20/549 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L INQIAAGE+IE +KELIENSLDA + +E GGG+ I DNG Sbjct: 6 PIQLLDPLTINQIAAGEVIENSVSVVKELIENSLDAGADEIEIETLGGGQGAIIIRDNGC 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G +E+IP+A+QRH TSKI + D ++++FGFRGEALPSI ++S + + S + G Sbjct: 66 GFRAEDIPIALQRHATSKIREFSDIFSLNSFGFRGEALPSIASISKMEIQSSIEGDE-GV 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I S P A GT V V LF+ +P R F KS Q + I +I ++ Sbjct: 125 RTVIHGGDIVSCEPCARQLGTTVIVNSLFYNVPVRRGFQKSMQSDRLGIRKLIENRILST 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + +++ + + ++ + F ER++ V+G+ F+ +A+ +++++N + + G G Sbjct: 185 ANIGWSWISEGHHEIQI---AKQQGFQERVAYVMGDHFMQDALTIDKEANGVRIVGVLGS 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+F+R +FIN R ++ FI + AYA +PL RYPV VL L + D NV Sbjct: 242 PSFHRPTRQGQKIFINDRPIESLFISKKVGDAYALLLPLHRYPVFVLKLYLPSSWCDFNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K R ++ + I ++I + + +L + D+ P Sbjct: 302 HPQKIEARILKEELVGDCIKEAIVETLAC----PPGILCRTHQEIEESDSVPLPMFRMLE 357 Query: 360 TSLTNTQEKLFLQEN---RLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 TS +E + +N S + L + T ++ ++ + + ++ Sbjct: 358 TSDVQEEESVEFDQNLFAYSSEDVSLEKQEYTSRGPKSQMDWIYSSDVRFLTSLGRV--- 414 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 ++++ +G+ I+ AA + L F + Q+ NS SQ LL P + + E H Sbjct: 415 -VLAEDLEGVHIIFTAAARKHLFFLSLMQE-NSRMYQSQALLIPLRLQVTPEEAFFFSHH 472 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L LGI+ + GP +I P ++ ++ + + L + + L ++ Sbjct: 473 GRTLCDLGIEISQVGPCVFSIESTPTVIGEEELKEWLLLLAARGSTDINSEALTALMKET 532 Query: 537 L--ATMACY 543 L AT + + Sbjct: 533 LTQATFSKH 541 >gi|269302603|gb|ACZ32703.1| DNA mismatch repair protein MutL [Chlamydophila pneumoniae LPCoLN] Length = 580 Score = 335 bits (860), Expect = 1e-89, Method: Composition-based stats. Identities = 155/546 (28%), Positives = 261/546 (47%), Gaps = 14/546 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L INQIAAGE+IE +KELIENSLDA + +E GGG+ I DNG Sbjct: 6 PIQLLDPLTINQIAAGEVIENSVSVVKELIENSLDAGADEIEIETLGGGQGAIIIRDNGC 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G +E+IP+A+QRH TSKI + D ++++FGFRGEALPSI ++S + + S + G Sbjct: 66 GFRAEDIPIALQRHATSKIREFSDIFSLNSFGFRGEALPSIASISKMEIQSSIEGDE-GV 124 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I G I S P A GT V V LF+ +P R F KS Q + I +I ++ Sbjct: 125 RTVIHGGDIVSCEPCARQLGTTVIVNSLFYNVPVRRGFQKSMQSDRLGIRKLIENRILST 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + +++ + + ++ + F ER++ V+G+ F+ +A+ +++++N + + G G Sbjct: 185 ANIGWSWISEGHHEIQI---AKQQGFQERVAYVMGDHFMQDALTIDKEANGVRIVGVLGS 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+F+R +FIN R ++ FI + AYA +PL RYPV VL L + D NV Sbjct: 242 PSFHRPTRQGQKIFINDRPIESLFISKKVGDAYALLLPLHRYPVFVLKLYLPSSWCDFNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K R ++ + I ++I + + +L + D+ P Sbjct: 302 HPQKIEARILKEELVGDCIKEAIVETL----TCPPGILCRTHQEIEESDSVPLPMFRMLE 357 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 TS +E + +N + + S + P + + + + + ++ Sbjct: 358 TSDVQEEESVEFNQNLFAYSSEDVSLEKQEYTSRGPKSQMDWMYSSDVRFLTSLGRV-VL 416 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ +G+ I+ AA + L F + Q+ NS SQ LL P + + E H Sbjct: 417 AEDLEGVHIIFTAAARKHLFFLSLMQE-NSRMYQSQALLIPLRLQVTPEEAFFFSHHGRT 475 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL-- 537 L LGI+ + GP +I P ++ ++ + + L + + L ++ L Sbjct: 476 LCDLGIEISQVGPCVFSIESTPTVIGEEELKEWLLLLAARGSTDINSEALTALMKETLTQ 535 Query: 538 ATMACY 543 AT + + Sbjct: 536 ATFSKH 541 >gi|14577936|gb|AAK68861.1| HexB [Lactococcus lactis] Length = 323 Score = 335 bits (860), Expect = 1e-89, Method: Composition-based stats. Identities = 117/324 (36%), Positives = 185/324 (57%), Gaps = 5/324 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L+E + NQIAAGE++ERP+ +KEL+ENS+DA SS++ + G ++ DNG Sbjct: 3 KIIELNEALANQIAAGEVVERPATVVKELVENSIDAGSSKIIINVEEAGLRLIEVIDNGL 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A++RH TSKI D D I T GFRGEALPSI +VS +T+ + + +G Sbjct: 63 GLEKEDVALALRRHATSKIKDSADLFRIRTLGFRGEALPSIASVSQMTIETSTAEEESGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G I ++ P+A GT + V +LF+ PARL ++KS Q E + ITD+I R+++A+ Sbjct: 123 KLVAKGGNIETLEPLAKRVGTKISVANLFYNTPARLKYIKSLQAELSHITDIINRLSLAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SFT K + NG+ + I+ + G ++ + L GY + Sbjct: 183 PEISFTLVNEGKEFLK---TAGNGDLRQVIAAIYGIGTAKKMRQIKGSDLDFELTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + INGR +++ + I Y + +GR+P +L ++IDP DVNV Sbjct: 240 PELTRANRNYITILINGRFIKNFLLNRAILEGYGNRLMVGRFPFAILSIKIDPTLADVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQ 323 HP K +R + I ++I Sbjct: 300 HPTKQEVRLSKERELMALISKAID 323 >gi|225027642|ref|ZP_03716834.1| hypothetical protein EUBHAL_01901 [Eubacterium hallii DSM 3353] gi|224954956|gb|EEG36165.1| hypothetical protein EUBHAL_01901 [Eubacterium hallii DSM 3353] Length = 731 Score = 335 bits (860), Expect = 1e-89, Method: Composition-based stats. Identities = 131/391 (33%), Positives = 197/391 (50%), Gaps = 10/391 (2%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M IR L + INQIAAGE++ERPS +KEL+EN++DA S+ V I GGG F +ITDN Sbjct: 1 MPEIRVLDQSTINQIAAGEVVERPSSIVKELVENAVDANSTAVTVEIKGGGIDFIRITDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ E++ A H TSKI D + + GFRGEAL SI +V+ + L+++ + + Sbjct: 61 GCGIEKEQVRKAFLPHATSKIRSASDLETVVSLGFRGEALSSIASVAKVELVTKTDEGIS 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G + S + GT +R+LFF PAR FLKS+ E + I+R+A+ Sbjct: 121 GIRYVIEGGEEKSYDEIGCPEGTTFIIRNLFFNTPARRKFLKSKMTEAGYVESFIQRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P +SF F N+ S NGN + I + G D N + + N I + GY Sbjct: 181 SHPDISFKFICDNKNK---ISTSGNGNLKDVIYNIFGRDVAMNLLPVKGNENGILVDGYI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P +RGN N F+NGR +++ I I Y + ++P L++ +DP D Sbjct: 238 GKPVISRGNRNYENYFVNGRYLKNNIISKAIEEGYKGHAMVHKFPFTALMISMDPHCFDA 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK +RFRN + + ++ +++ + KK + + P+ K Sbjct: 298 NVHPAKMEMRFRNAEELYSSVMSAVRSSFVKKELIPKVGIGNDKKEKESVKKIPEPFERK 357 Query: 358 YATSLTN----TQEKLFLQENRLSTNDLLPS 384 +QEK+ E R D Sbjct: 358 RRAIEERFSSLSQEKIREIEKRKEQGDAAEQ 388 Score = 202 bits (515), Expect = 1e-49, Method: Composition-based stats. Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 5/240 (2%) Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP----VEESEATHYQLGIACAQIH 414 A + + ++ Q+ + S L + TY + V Q+ Sbjct: 491 AEEYSESDDRQIKQDKKPSGQKELLKEADTYGKGTQMSFADVPLLSEEARPKHRIIGQVF 550 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 + Y + + + L VDQHAAHE++++EK+++D + I Q + P I+ E Sbjct: 551 RTYWLVEFDEKLFFVDQHAAHEKVMYEKLKKDLENNTIVQQMVAPPVILTFSIKEQQKFK 610 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 +E +LG E FG N IR +PA L + +L +I D+I ++S L+ I Sbjct: 611 ICEESFKKLGFLIEEFGGNEYCIRGVPANLLGIDPQELFIEIFDQIEENSGKMNLE-MIT 669 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LATMAC +++ M EM+ L+ ++ K N QC HGRPT I + ++EK F R Sbjct: 670 DRLATMACKAAVKGNTAMSYQEMDALMDQLMKLDNPYQCPHGRPTIISMTKYELEKKFKR 729 >gi|329577814|gb|EGG59237.1| DNA mismatch repair protein [Enterococcus faecalis TX1467] Length = 710 Score = 335 bits (860), Expect = 1e-89, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 224/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I+D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANISDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 200 bits (509), Expect = 5e-49, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQ---DNAPKTHLPKYATSLTNTQ--EKLFLQENRLSTN 379 A + S + S+ Q + T +P SL +++ +++F +E +L Sbjct: 429 AYETSSAAVDSENHWETASNEQQVIAEETKITEVPDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|29377616|ref|NP_816770.1| DNA mismatch repair protein [Enterococcus faecalis V583] gi|257418005|ref|ZP_05594999.1| DNA mismatch repair protein mutL [Enterococcus faecalis T11] gi|307288399|ref|ZP_07568390.1| DNA mismatch repair protein [Enterococcus faecalis TX0109] gi|29345083|gb|AAO82840.1| DNA mismatch repair protein HexB [Enterococcus faecalis V583] gi|257159833|gb|EEU89793.1| DNA mismatch repair protein mutL [Enterococcus faecalis T11] gi|306500631|gb|EFM69957.1| DNA mismatch repair protein [Enterococcus faecalis TX0109] gi|315573187|gb|EFU85378.1| DNA mismatch repair protein [Enterococcus faecalis TX0309B] gi|315581311|gb|EFU93502.1| DNA mismatch repair protein [Enterococcus faecalis TX0309A] Length = 710 Score = 335 bits (860), Expect = 1e-89, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 223/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 201 bits (511), Expect = 3e-49, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQ---DNAPKTHLPKYATSLTNTQ--EKLFLQENRLSTN 379 A + S + S+ Q + T +P SL +++ +++F +E +L Sbjct: 429 AYETSSAAADSANHWETASNEQQVIAEETKITEVPDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|300861473|ref|ZP_07107557.1| DNA mismatch repair protein, C-terminal domain protein [Enterococcus faecalis TUSoD Ef11] gi|295114466|emb|CBL33103.1| DNA mismatch repair protein MutL [Enterococcus sp. 7L76] gi|300848934|gb|EFK76687.1| DNA mismatch repair protein, C-terminal domain protein [Enterococcus faecalis TUSoD Ef11] gi|315144209|gb|EFT88225.1| DNA mismatch repair protein [Enterococcus faecalis TX2141] Length = 710 Score = 335 bits (860), Expect = 1e-89, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 224/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPESVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 200 bits (509), Expect = 6e-49, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS-----LTNTQEKLFLQENRLSTN 379 A + S + S+ Q A +T + + + S + +++F +E +L Sbjct: 429 AYETSSAAVDSANHWETASNEQQVIAEETKITEVSDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|255970642|ref|ZP_05421228.1| DNA mismatch repair protein mutL [Enterococcus faecalis T1] gi|257088270|ref|ZP_05582631.1| MutL [Enterococcus faecalis D6] gi|307276608|ref|ZP_07557726.1| DNA mismatch repair protein [Enterococcus faecalis TX2134] gi|312953267|ref|ZP_07772112.1| DNA mismatch repair protein [Enterococcus faecalis TX0102] gi|255961660|gb|EET94136.1| DNA mismatch repair protein mutL [Enterococcus faecalis T1] gi|256996300|gb|EEU83602.1| MutL [Enterococcus faecalis D6] gi|306506718|gb|EFM75870.1| DNA mismatch repair protein [Enterococcus faecalis TX2134] gi|310628804|gb|EFQ12087.1| DNA mismatch repair protein [Enterococcus faecalis TX0102] gi|315026535|gb|EFT38467.1| DNA mismatch repair protein [Enterococcus faecalis TX2137] gi|315152837|gb|EFT96853.1| DNA mismatch repair protein [Enterococcus faecalis TX0031] gi|323479095|gb|ADX78534.1| DNA mismatch repair protein mutL [Enterococcus faecalis 62] Length = 710 Score = 335 bits (860), Expect = 1e-89, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 223/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 201 bits (510), Expect = 4e-49, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQ---DNAPKTHLPKYATSLTNTQ--EKLFLQENRLSTN 379 A + S + S+ Q + T +P SL +++ +++F +E +L Sbjct: 429 AYETSSAAVDSENHWETASNEQQVIAEETKITEVPDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSATSQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|315164364|gb|EFU08381.1| DNA mismatch repair protein [Enterococcus faecalis TX1302] Length = 710 Score = 335 bits (860), Expect = 1e-89, Method: Composition-based stats. Identities = 133/421 (31%), Positives = 220/421 (52%), Gaps = 9/421 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 S 420 Sbjct: 416 P 416 Score = 201 bits (511), Expect = 3e-49, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQ---DNAPKTHLPKYATSLTNTQ--EKLFLQENRLSTN 379 A + S + S+ Q + T +P SL +++ +++F +E +L Sbjct: 429 AYETSSAAADSANHWETASNEQQVIAEETKITEVPDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|256958441|ref|ZP_05562612.1| MutL [Enterococcus faecalis DS5] gi|257078247|ref|ZP_05572608.1| MutL [Enterococcus faecalis JH1] gi|307270518|ref|ZP_07551816.1| DNA mismatch repair protein [Enterococcus faecalis TX4248] gi|256948937|gb|EEU65569.1| MutL [Enterococcus faecalis DS5] gi|256986277|gb|EEU73579.1| MutL [Enterococcus faecalis JH1] gi|306513099|gb|EFM81733.1| DNA mismatch repair protein [Enterococcus faecalis TX4248] gi|315034869|gb|EFT46801.1| DNA mismatch repair protein [Enterococcus faecalis TX0027] gi|315146538|gb|EFT90554.1| DNA mismatch repair protein [Enterococcus faecalis TX4244] Length = 710 Score = 335 bits (860), Expect = 1e-89, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 223/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 200 bits (509), Expect = 5e-49, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQ---DNAPKTHLPKYATSLTNTQ--EKLFLQENRLSTN 379 A + S + S+ Q + T +P SL +++ +++F +E +L Sbjct: 429 AYETSSAAVDSENHWETASNEQQVIAEETKITEVPDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|315150784|gb|EFT94800.1| DNA mismatch repair protein [Enterococcus faecalis TX0012] Length = 710 Score = 335 bits (860), Expect = 1e-89, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 223/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 201 bits (510), Expect = 4e-49, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS-----LTNTQEKLFLQENRLSTN 379 A + S + S+ Q A +T + + + S + +++F +E +L Sbjct: 429 AYETSTAAADSANHWESASNEQQVIAEETKITEVSDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPPERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|229547981|ref|ZP_04436706.1| DNA mismatch repair protein [Enterococcus faecalis ATCC 29200] gi|257091401|ref|ZP_05585762.1| DNA mismatch repair protein mutL [Enterococcus faecalis CH188] gi|312905469|ref|ZP_07764583.1| DNA mismatch repair protein [Enterococcus faecalis TX0635] gi|229306857|gb|EEN72853.1| DNA mismatch repair protein [Enterococcus faecalis ATCC 29200] gi|257000213|gb|EEU86733.1| DNA mismatch repair protein mutL [Enterococcus faecalis CH188] gi|310631198|gb|EFQ14481.1| DNA mismatch repair protein [Enterococcus faecalis TX0635] gi|315161300|gb|EFU05317.1| DNA mismatch repair protein [Enterococcus faecalis TX0645] gi|315577077|gb|EFU89268.1| DNA mismatch repair protein [Enterococcus faecalis TX0630] Length = 710 Score = 335 bits (860), Expect = 1e-89, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 223/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 200 bits (508), Expect = 7e-49, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS-----LTNTQEKLFLQENRLSTN 379 A + S + S+ Q A +T + + + S + +++F +E +L Sbjct: 429 AYETSSATVDSENHWETASNEQQVIAEETKITEVSDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|294779166|ref|ZP_06744576.1| DNA mismatch repair protein, C-terminal domain protein [Enterococcus faecalis PC1.1] gi|294453799|gb|EFG22191.1| DNA mismatch repair protein, C-terminal domain protein [Enterococcus faecalis PC1.1] Length = 710 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 223/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNTATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 200 bits (509), Expect = 5e-49, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQ---DNAPKTHLPKYATSLTNTQ--EKLFLQENRLSTN 379 A + S + S+ Q + T +P SL +++ +++F +E +L Sbjct: 429 AYETSSAAVDSENHWETASNEQQVIAEETKITEVPDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|257080442|ref|ZP_05574803.1| DNA mismatch repair protein [Enterococcus faecalis E1Sol] gi|256988472|gb|EEU75774.1| DNA mismatch repair protein [Enterococcus faecalis E1Sol] Length = 710 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 223/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 200 bits (508), Expect = 6e-49, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS-----LTNTQEKLFLQENRLSTN 379 A + S + S+ Q A +T + + + S + +++F +E +L Sbjct: 429 AYETSSAAVDSENHWETASNEQQVIAEETKITEVSDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|315159532|gb|EFU03549.1| DNA mismatch repair protein [Enterococcus faecalis TX0312] Length = 710 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 134/435 (30%), Positives = 223/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I + + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGHGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 200 bits (509), Expect = 5e-49, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQ---DNAPKTHLPKYATSLTNTQ--EKLFLQENRLSTN 379 A + S + S+ Q + T +P SL +++ +++F +E +L Sbjct: 429 AYETSSAAVDSENHWETASNEQQVIAEETKITEVPDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSATSQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|327536287|gb|AEA95121.1| DNA mismatch repair protein HexB [Enterococcus faecalis OG1RF] Length = 710 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 223/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 201 bits (511), Expect = 3e-49, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQ---DNAPKTHLPKYATSLTNTQ--EKLFLQENRLSTN 379 A + S + S+ Q + T +P SL +++ +++F +E +L Sbjct: 429 AYETSSAAADSANHWETASNEQQVIAEETKITEVPDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P IID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIIIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|315172873|gb|EFU16890.1| DNA mismatch repair protein [Enterococcus faecalis TX1346] Length = 710 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 138/485 (28%), Positives = 229/485 (47%), Gaps = 8/485 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---SKKMISSFHQDNAPKTHLP 356 HP K +R + I Q+IQ+ ++++ + ++ KK + + + L Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLRFKKKLPPEPKAEQMEIPLS 359 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 ++ L D+ S + V ++E + A Sbjct: 360 TEQPAVKQRPGSLSYNPATGRFYAEHAIDETPASSAPEAVNQTERAVDPMDDPFAPPVPE 419 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 AA +E + ++ P+ L A Sbjct: 420 STSVAEETSAYETSSAAADSANHWETASNEQQVIAEETKITEVPDSEPSLPSSEAADEVF 479 Query: 477 DEDLH 481 E++ Sbjct: 480 QEEMK 484 Score = 202 bits (513), Expect = 2e-49, Method: Composition-based stats. Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQ---DNAPKTHLPKYATSLTNTQ--EKLFLQENRLSTN 379 A + S + S+ Q + T +P SL +++ +++F +E +L Sbjct: 429 AYETSSAAADSANHWETASNEQQVIAEETKITEVPDSEPSLPSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|256761016|ref|ZP_05501596.1| DNA mismatch repair protein mutL [Enterococcus faecalis T3] gi|256962999|ref|ZP_05567170.1| MutL [Enterococcus faecalis HIP11704] gi|307273664|ref|ZP_07554892.1| DNA mismatch repair protein [Enterococcus faecalis TX0855] gi|256682267|gb|EEU21962.1| DNA mismatch repair protein mutL [Enterococcus faecalis T3] gi|256953495|gb|EEU70127.1| MutL [Enterococcus faecalis HIP11704] gi|306509677|gb|EFM78719.1| DNA mismatch repair protein [Enterococcus faecalis TX0855] Length = 710 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 223/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 200 bits (508), Expect = 6e-49, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 120/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS-----LTNTQEKLFLQENRLSTN 379 A + S + S+ Q +T + + + S + +++F +E +L Sbjct: 429 AYETSSAAADSANHWETASNEQQIIDEETKITEVSDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPVGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|229547408|ref|ZP_04436133.1| DNA mismatch repair protein [Enterococcus faecalis TX1322] gi|256854834|ref|ZP_05560198.1| DNA mismatch repair protein HexB [Enterococcus faecalis T8] gi|257417287|ref|ZP_05594281.1| MutL [Enterococcus faecalis AR01/DG] gi|229307440|gb|EEN73427.1| DNA mismatch repair protein [Enterococcus faecalis TX1322] gi|256710394|gb|EEU25438.1| DNA mismatch repair protein HexB [Enterococcus faecalis T8] gi|257159115|gb|EEU89075.1| MutL [Enterococcus faecalis ARO1/DG] gi|315028310|gb|EFT40242.1| DNA mismatch repair protein [Enterococcus faecalis TX4000] Length = 710 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 223/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 201 bits (510), Expect = 4e-49, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS-----LTNTQEKLFLQENRLSTN 379 A + S + S+ Q A +T + + + S + +++F +E +L Sbjct: 429 AYETSSAAADSANHWETASNEQQIIAEETKITEVSDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|312902027|ref|ZP_07761289.1| DNA mismatch repair protein [Enterococcus faecalis TX0470] gi|311290963|gb|EFQ69519.1| DNA mismatch repair protein [Enterococcus faecalis TX0470] Length = 710 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 223/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 200 bits (509), Expect = 5e-49, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS-----LTNTQEKLFLQENRLSTN 379 A + S + S+ Q +T + + + S + +++F +E +L Sbjct: 429 AYETSSAAADSANHWETASNEQQIIDEETKITEVSDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R PA ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPAWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|313157387|gb|EFR56810.1| DNA mismatch repair protein, C-terminal domain protein [Alistipes sp. HGB5] Length = 679 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 121/402 (30%), Positives = 200/402 (49%), Gaps = 8/402 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L E + NQIAAGE++ RP+ +KE++EN++DA + V+ GGK QI D+G Sbjct: 4 KIRLLPEVVANQIAAGEVVNRPASVVKEMMENAIDAGARTVKVNFRDGGKDLIQIVDDGC 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ + MA RH TSKI+ DD ++TFGFRGEAL SI AV+ + L +R + G Sbjct: 64 GMSPIDARMAFDRHATSKITSVDDIYALNTFGFRGEALASIAAVAQVELRTRQEGDEVGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q I+G + + PV G+ VR+LF+ +PAR FL I +R+A+ Sbjct: 124 QTEINGGQFAGQTPVMCPVGSQFFVRNLFYNVPARRRFLDKSTTSAAQIKSEFQRVALCN 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++F + Y + + RI V+G N +E+ ++ ++GY G Sbjct: 184 PQIAFELYANDAPVYTL----GAASLAGRIVDVVGRHIKQNLLEVEADTSIARIEGYIGR 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + + Y+F+NGR + ++ S I AY + IP P L L IDP ++DVNV Sbjct: 240 PAAAKRRNGEQYLFVNGRYFKSSYLTSAIMKAYEKLIPESSSPSYFLYLTIDPSRIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ ++F + + + ++++ + K G ++ I + A Sbjct: 300 HPQKTEVKFADEEAVWQIVNAAVRETLAKTGAVPLMDFDREGIVEIPVLTKGAVYSEPRA 359 Query: 360 TSLT--NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 S + N + ++ + N D +S++ + ++ Sbjct: 360 MSNSEYNPFREEYIDPSAPDPNVDFAGFDVPFSDNGQTLSDN 401 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 6/147 (4%) Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 + Y+ + V+VD A ER+++E + S SQ LL PE + L + E A Sbjct: 500 PLGGGYVAALLGGRFVVVDVRRARERILYEDYLKMLGSGSSVSQQLLFPERLVLPDSEYA 559 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 L+ E+ + LG + G A+ ++ PA + ++ QLL +++ ST +L D Sbjct: 560 LLEENAVEFASLGFDLDFQGDCAVEVKGTPADMPADSVDQLLYELLQAF---STPVSLAD 616 Query: 532 -RIENILATMACYGSIRSGRKM-QSIE 556 R E I A MA G+ + ++ E Sbjct: 617 VRREKIAAVMA-RGAAKQTARLMSRDE 642 >gi|315171155|gb|EFU15172.1| DNA mismatch repair protein [Enterococcus faecalis TX1342] Length = 710 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 223/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMTLIEQAIQEVLSQEQLIPNAADNLR----FKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 201 bits (510), Expect = 4e-49, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS-----LTNTQEKLFLQENRLSTN 379 A + S + S+ Q A +T + + + S + +++F +E +L Sbjct: 429 AYETSSAAADSANHWETASNEQQIIAEETKITEVSDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|254518943|ref|ZP_05130999.1| DNA mismatch repair protein mutL [Clostridium sp. 7_2_43FAA] gi|226912692|gb|EEH97893.1| DNA mismatch repair protein mutL [Clostridium sp. 7_2_43FAA] Length = 684 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 136/423 (32%), Positives = 214/423 (50%), Gaps = 16/423 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E N+IAAGE++ERPS +KEL+ENS+DAE+ + I GG S +I D+G Sbjct: 3 RINLLDEHTSNKIAAGEVVERPSSVVKELVENSIDAEAKNITIEIEEGGISLIRIIDDGN 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++I A H TSKI +D +I T GFRGEAL SI ++S + L S+ + + G+ Sbjct: 63 GIHKDDIKKAFMPHATSKIQNVEDIYSIMTLGFRGEALASIASISKVLLRSKINEVDFGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I+I G +I S N GTI+EVRDLF+ +PAR FLKS E LI+D++ R+A++ Sbjct: 123 EISIEGGEILSESETGTNKGTIIEVRDLFYNVPARRKFLKSTSREGALISDIVSRIALSN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VS F K+ GN + I V G+ N + + I L GY G Sbjct: 183 PDVSIKFYNNGK---KVLHTYGTGNLKDVIRTVYGKTISENLIYFESAEDAIHLYGYIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 RG+ N +F+NGR +++K I++ I A+ + ++P VL LE+ P VDVN+ Sbjct: 240 EEIARGSRNNQSIFVNGRYIKNKTIVAAIENAFKSFATVNKFPFFVLFLEVYPEFVDVNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ I+F+ I + ++ KA + + H+D P + + + Sbjct: 300 HPTKAEIKFKEDRGIFKKVFDAVHKAFKSEVFN---DFYIPEEEKEHKDEVPTEVVEEIS 356 Query: 360 T--------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 S +N + ++N + + P S ++ EE + + Sbjct: 357 FNINLNDTYSNSNNLPLSYYEDNSNKNKENEINTMPGVSYEDLKREEELYNNLKNLKELG 416 Query: 412 QIH 414 ++ Sbjct: 417 KLD 419 Score = 196 bits (497), Expect = 1e-47, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 110/217 (50%), Gaps = 1/217 (0%) Query: 378 TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 ++ + +++ +++N E+ + Q ++ YI+++ + L ++DQHAAHE+ Sbjct: 467 KSNEVNNENVVSNKENLNNIENRNAKFPNLRIIGQFNKTYILAEYDEVLYMIDQHAAHEK 526 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 ++FEK + I Q LL P +IDL + E+ + G E FG N IAI Sbjct: 527 ILFEKYLKSIEEGDIVVQQLLVPTLIDLTTDDFCYYEENSKVFTMAGFSIENFGGNTIAI 586 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 +E+P L K + L +I+D I + T + + I AT+AC ++++ + +EM Sbjct: 587 KEVPYFLGKLDPRNLFINILDNIKSLGSGKTTEVKYNRI-ATLACKAAVKANDYLNQMEM 645 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +L+ ++ + C HGRP IK +++K F R Sbjct: 646 EKLINDLRYIDDPFHCPHGRPVIIKFTNYELDKKFRR 682 >gi|303241529|ref|ZP_07328030.1| DNA mismatch repair protein MutL [Acetivibrio cellulolyticus CD2] gi|302590947|gb|EFL60694.1| DNA mismatch repair protein MutL [Acetivibrio cellulolyticus CD2] Length = 732 Score = 335 bits (858), Expect = 2e-89, Method: Composition-based stats. Identities = 125/354 (35%), Positives = 186/354 (52%), Gaps = 5/354 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L E NQIAAGE++ERP+ +KEL+ENS+DA SS + I GG S ++ DNG Sbjct: 10 KIVILDENTSNQIAAGEVVERPASVVKELVENSIDAGSSNISIEINNGGVSLIKVVDNGN 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A +RH TSKI DD +I T GFRGEAL SI +VS + L SR G Sbjct: 70 GIDEDDVEIAFERHSTSKIRRADDLESISTLGFRGEALASIASVSLVELTSRIKDRQYGK 129 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I I G I VR GT VRDLF+ PAR FLK + E I+D++ R+A+ Sbjct: 130 YIKIQGGIIKEVRQTGCPVGTTFIVRDLFYNTPARFKFLKKDTTEAGYISDMVNRIALGN 189 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 ++S ++ + N + I + G++ +E+ + +I + GY G Sbjct: 190 QQISMKLINNRN---SVIHTPGNNDLLSAIFSIYGKETAKEVLEVKYQDEKIEIYGYVGK 246 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N ++INGR V++K I S I AY + ++ VVL + I+P VDVNV Sbjct: 247 PEIARANRNYQSIYINGRYVKNKTISSAIDEAYKTYLLKNKFAFVVLHIRINPLFVDVNV 306 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 HP K +RF + I + ++ A+ K + + + + + F + + Sbjct: 307 HPTKMEVRFSDEPAIFKAVYHAVNNALLSKSLIRNVEMKENPKNFFKFEENNFS 360 Score = 187 bits (476), Expect = 3e-45, Method: Composition-based stats. Identities = 67/225 (29%), Positives = 120/225 (53%), Gaps = 2/225 (0%) Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 ++E ++ + + P +D N EA Q Q YI+ Q D L+++D Sbjct: 507 IEEPKIESQEEKPDEDEKREPINADDRAKEANQLQAAKIIGQAFSTYILLQDGDNLILID 566 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAAHER++FE +++ + + +Q LL+ +I+L E +I E+ E L+RLG E F Sbjct: 567 QHAAHERIMFEALKKKYKRNESLAQYLLSSVVIELTNQEVKIIEENREKLNRLGFAFENF 626 Query: 491 GPNAIAIREIPAILSK-KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 G N+I +R IP L+ ++ + DI+D ++ + E L +AC ++++ Sbjct: 627 GNNSIILRSIPVALADNASVKETFLDILDFLMSDKRKENI-LIEEEALYRVACKSAVKAN 685 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +++ IE+ ++++++ N C HGRPT IK+ + EK+F R Sbjct: 686 KRLDDIEIKKIIKDLSNIENPYTCPHGRPTLIKITKYEFEKMFKR 730 >gi|299530786|ref|ZP_07044201.1| DNA mismatch repair protein MutL [Comamonas testosteroni S44] gi|298721302|gb|EFI62244.1| DNA mismatch repair protein MutL [Comamonas testosteroni S44] Length = 745 Score = 335 bits (858), Expect = 2e-89, Method: Composition-based stats. Identities = 121/385 (31%), Positives = 206/385 (53%), Gaps = 7/385 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ ++EL++N+LD+ ++++ + GG + D+G Sbjct: 28 PIRDLPDELISQIAAGEVVERPASVVRELVDNALDSGAAQITVRLLAGGVRLIAVEDDGC 87 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A++RH TSKISD D + T GFRGEAL +I +VS ++ SRP ++ Sbjct: 88 GIPRDELPVALRRHATSKISDLHDLETVATMGFRGEALAAIASVSETSIFSRPAGQDSAY 147 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ RP A N GT VEV++LFF+ PAR FLK++ E + +RR A+A Sbjct: 148 LLDARSGEL---RPAARNQGTTVEVKELFFSTPARRKFLKTDATELAHCIESVRRHALAR 204 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P V F + + + R++ V+ + F++N+V ++ + + + G Sbjct: 205 PDVGFAIWHEGKLVEQWRAAGSTPDEALSRRLADVLNDKFVDNSVAVDHWAGPVHVTGRA 264 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 GIP R +Q + ++NGR V+DK + R AY + + + PV L +EIDP +VDV Sbjct: 265 GIPDAARSRPDQQFCYVNGRFVRDKVLTHAARAAYEDVLHGNKQPVYALYIEIDPARVDV 324 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +RFR+ + + +I+ A+ + + + + T P Sbjct: 325 NVHPTKIEVRFRDSREVHQAVRHAIENALATPRAAAVVEAAAQEAARQPGLIDDSTATPV 384 Query: 358 YATSLTNTQEKLFLQENRLSTNDLL 382 A + T + R+S + Sbjct: 385 AAKAATKPAAAPAWPQTRMSFGEPA 409 Score = 212 bits (540), Expect = 1e-52, Method: Composition-based stats. Identities = 77/195 (39%), Positives = 117/195 (60%), Gaps = 4/195 (2%) Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN----STKITSQTLLT 459 + LG A AQ+H YI+++ + G+VIVD HAAHER+++E+++ N +I SQ LL Sbjct: 549 WPLGRAVAQLHGVYILAENSQGMVIVDMHAAHERIVYEQLKNAVNTENGDQQIPSQPLLI 608 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P E A H E L LG++ F P +A+R +PA L++ + +L R ++ E Sbjct: 609 PATFAATPEEVATAEAHAETLLTLGMEVSPFSPKTLAVRAVPATLAQGDAVELARSVLAE 668 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 + + +Q ILATMAC+G++R+ RK+ EMN LLR+ME S QCNHGRPT Sbjct: 669 LAQHDASTVVQRARNEILATMACHGAVRANRKLTLDEMNALLRQMEVTERSDQCNHGRPT 728 Query: 580 FIKLKLSDIEKLFGR 594 + +L + +++ LF R Sbjct: 729 WRQLSMKELDALFLR 743 >gi|257083164|ref|ZP_05577525.1| DNA mismatch repair protein [Enterococcus faecalis Fly1] gi|256991194|gb|EEU78496.1| DNA mismatch repair protein [Enterococcus faecalis Fly1] Length = 710 Score = 335 bits (858), Expect = 2e-89, Method: Composition-based stats. Identities = 132/416 (31%), Positives = 217/416 (52%), Gaps = 8/416 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL---SKKMISSFHQDNAPKTHLP 356 HP K +R + I Q+IQ+ ++++ + ++ KK + S + + L Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNLRFKKKLPSEPKAEQMEIPLS 359 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 ++ L +D+ S + V ++E + A Sbjct: 360 TEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Score = 199 bits (507), Expect = 8e-49, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS-----LTNTQEKLFLQENRLSTN 379 A + S + S+ Q A +T + + + S + +++F +E +L Sbjct: 429 AYESSSAAVDSANQWETASNEQQVIAEETKITEVSDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|188586123|ref|YP_001917668.1| DNA mismatch repair protein MutL [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350810|gb|ACB85080.1| DNA mismatch repair protein MutL [Natranaerobius thermophilus JW/NM-WN-LF] Length = 680 Score = 335 bits (858), Expect = 2e-89, Method: Composition-based stats. Identities = 127/469 (27%), Positives = 215/469 (45%), Gaps = 9/469 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L +I +IAAGE++ERP+ +KELIENS+DA S ++ ++ GK ++ DNG Sbjct: 3 RINILRHEISEKIAAGEVVERPASVVKELIENSIDAGSDNIQIFLSKAGKELIRVIDNGL 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A RH TSK++ D I+T GFRGEAL SI AVS + + +R + G Sbjct: 63 GIHPEDVELAFSRHATSKVNSIKDLDKINTLGFRGEALASIAAVSKIEMNTRRHDSKEGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + K+ PGT + V+DLF+ PARL FL E E LI D+I + A+A Sbjct: 123 RVFLEEGKVQQRGSAGCPPGTDIAVKDLFYNTPARLKFLSKESTEIALIHDIINKFALAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + F K+ S + E I+ + G + + + IT+ GY Sbjct: 183 PNIRFRALNGNK---KLLQTSGRNDMLEVIANIYGYQTAKKLLPIKYSQDGITITGYIAK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N + F+N R V+ F+ + Y +P RYP +L L++ +DVNV Sbjct: 240 PELTRSNRSYQTFFVNDRYVKSTFLSERLEKGYHTLLPKHRYPFSILKLQVPDEILDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK ++RF N I N + +++ + + ++ + + + + + Sbjct: 300 HPAKIHVRFINEKQIGNMLTKAVTEKLKQEQLIFQAPKVNNTKKNQTKPEGSQLRFRGVN 359 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + + EK + N++ D+ + N+ ++E + +N+I Sbjct: 360 KNNAPSFEKTSSKFKSQLNNNVY--DNISSKTSNNYLKEKQEYDIPRINNKVDHTKNHIE 417 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 +QT + + E EK + S + L + Sbjct: 418 NQTENHIET--HQKTQEIGDQEKTSDSVHYGSNPSSKPIGDSSGKLSDD 464 Score = 179 bits (454), Expect = 1e-42, Method: Composition-based stats. Identities = 66/295 (22%), Positives = 131/295 (44%), Gaps = 4/295 (1%) Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 +K+ + + I + K + K + + Q+ + Sbjct: 387 SKTSNNYLKEKQEYD-IPRINNKVDHTKNHIENQTENHIETHQKTQEIGDQEKTSDSVHY 445 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA--CAQIHQNYII 419 +N K + ++D + + D + +E + L QI Y I Sbjct: 446 GSNPSSKPIGDSSGKLSDDSSGESYSDHIDTIDLADNNENFLHDLLEYRVVGQIFTTYWI 505 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 +++D + ++DQHAAHER+ ++ + + S+++ SQ ++ ++L + ++ + Sbjct: 506 LESSDEIYLIDQHAAHERINYQLLMDRYRSSQLKSQQVIP-YTLELDSAGITALEDNLDK 564 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L + G++ E FG N + +R +P + + D+ID++I +E +L T Sbjct: 565 LRQCGLEFEFFGQNTLLVRGVPFAIKDIFDQDAIYDLIDQLIKHPDNDLDITSLEEMLIT 624 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC SI++ K+ + E+ LL+ + + P C HGRPT I L +D+EKLF R Sbjct: 625 IACKKSIKANEKIGAKELKSLLKSLVETPTPFTCPHGRPTIINLTRTDVEKLFYR 679 >gi|255974226|ref|ZP_05424812.1| DNA mismatch repair protein mutL [Enterococcus faecalis T2] gi|307284812|ref|ZP_07564968.1| DNA mismatch repair protein [Enterococcus faecalis TX0860] gi|255967098|gb|EET97720.1| DNA mismatch repair protein mutL [Enterococcus faecalis T2] gi|306503071|gb|EFM72328.1| DNA mismatch repair protein [Enterococcus faecalis TX0860] Length = 710 Score = 334 bits (857), Expect = 2e-89, Method: Composition-based stats. Identities = 135/435 (31%), Positives = 222/435 (51%), Gaps = 9/435 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++LSE++ NQIAAGE++ERP+ +KEL+EN+LDA S++++ I G QI DNG Sbjct: 3 KIQELSEQLANQIAAGEVVERPASVVKELVENALDAGSTQIDIFIEEAGLKTIQIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A +RH TSKI DD I + GFRGEALPSI +VS + + + + G+ Sbjct: 63 GIAKEDVLNAFKRHATSKIHTRDDLFRIRSLGFRGEALPSIASVSEMIVETATAEEEEGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ RP A+ GT + V +LF+ PARL ++K+ Q E I D++ R+A+++ Sbjct: 123 YVILKGGKVEENRPAALRKGTKMTVSNLFYNTPARLKYVKTIQTELANIGDIVNRLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 PKV+F KM + NG+ + I+ + G +++ K + TL GY + Sbjct: 183 PKVAFRLVHDGH---KMMSTTGNGDLKQTIAGIYGISTAKKMLKIEGKDLDFTLTGYVSL 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N INGR +++ + I Y + +GR+P+ VL +E+DP VDVNV Sbjct: 240 PEVTRASRNYLSTIINGRYIKNFALNKAIVAGYGSKLMVGRFPIAVLEIEMDPLLVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I Q+IQ+ ++++ + ++ + F + P+ + Sbjct: 300 HPTKQEVRLSKEKDLMALIEQAIQEVLSQEQLIPNAADNL----HFKKKLPPEPKAEQME 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 L+ Q + + LS N ++ D P + Q A + + Sbjct: 356 IPLSTEQPAVKQRPGSLSYNPATGRFYAEHATDETPASSAPEAVNQTERAVDPMDDPFAP 415 Query: 420 SQTTDGLVIVDQHAA 434 V + A Sbjct: 416 PVPESTSVAEETSAY 430 Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats. Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 9/278 (3%) Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS-----LTNTQEKLFLQENRLSTN 379 A + S + S+ Q A +T + + + S + +++F +E +L Sbjct: 429 AYETSSAAADSANHWETASNEQQVIAEETKITEVSDSEPSLRSSEAADEVFQEEMKLHPE 488 Query: 380 ---DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + S N EE + Q+H Y+ +Q+ DGL I+DQHAA E Sbjct: 489 FDANSAASQRELKQALNKLEEERPTERFPELEYFGQMHGTYLFAQSKDGLFIIDQHAAQE 548 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+ +E R+ Q LL P +ID + I E E L +GI E FG N+ Sbjct: 549 RIKYEYFREKIGEVSDDLQELLVPIVIDYPNSDALKIKEQKETLAEVGIHLEDFGQNSFI 608 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P ++R++ID ++ + + +++ E M+C SI++ + + Sbjct: 609 VRAHPTWYPAGEEESIVREMIDMLLTTG-SVSVKKFREATAIMMSCKRSIKANHYLNEQQ 667 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LL+++ N C HGRP I SD+E++F R Sbjct: 668 ARVLLKDLALCENPFNCPHGRPVLIHFTNSDMERMFKR 705 >gi|300811160|ref|ZP_07091672.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497864|gb|EFK32874.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 656 Score = 334 bits (857), Expect = 2e-89, Method: Composition-based stats. Identities = 145/663 (21%), Positives = 262/663 (39%), Gaps = 83/663 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+EN++DA++SR+ + G + DNG Sbjct: 3 KIHELSENLTNQIAAGEVIERPASVVKELVENAIDAQASRIRVEVQHSGLKQISVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKI D D NI T GFRGEAL SI AV+H+ +++ T Sbjct: 63 GIAPDQVDLAFMRHATSKIQDEHDLFNIATLGFRGEALASIAAVAHVEILTSTDGQ-TAT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + A +G GT + V D+F+ PARL +LKS + E I D++ R+A+ + Sbjct: 122 RAAFAGGVKKFQEDAGSAKGTKITVGDIFYNTPARLKYLKSPKTELLKIVDIVNRIALGH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++S T ++ + NGN + ++ + G + + + + TL G Sbjct: 182 PEISLTLASDGK---VLLRTPGNGNLKQDVANIYGRKVAEKMLTVENEDPDFTLYGLVSE 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + N + +NGR +++ + S + Y + G+YP+ VL +E DP VDVNV Sbjct: 239 ANLTRSSRNFISILLNGRYIKNYQLSSALLDGYGNKLG-GKYPIAVLAIEADPLLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I ++ +A+ + ++ ++ F Sbjct: 298 HPTKEEVRLSKEKELSRLITSAVTEALMDEDEASPLF----QLTPFKDKTQLDQLEFNLK 353 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 ++ +T+ Q + D T ++ + E E + + + Sbjct: 354 PNVVDTRRPDDFQLEVSQVAEPEGKTDITNKKETESKETKETAEKKENKQEEKEEKTSAP 413 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 V D + + ++ T + + L+ +H Sbjct: 414 EYVDLNQVREDDQYVLTKSWGQHVK---EQTALPPFAGGEEAASPVTSKADQLLRQHLPA 470 Query: 480 LHRL----GIKAERFGPNAIAIREI---------------------------PAIL---- 504 L L G G + + ++ P + Sbjct: 471 LRLLGQMGGYLLAEHGGDLYLLDQVAARRRLEYDQILASLEKDENYQQGLLEPLVFDFSV 530 Query: 505 ----SKKNIPQLLRDIIDEIIDSSTTYTL----------------QDRIENILATM---- 540 K+ LLR + E+ D L ++ ++ +L++ Sbjct: 531 YDYQKLKDQLPLLRQLGLEMEDFGQNTLLMHSYPTWLKGEVTVQVRELLDQLLSSRENDG 590 Query: 541 -------ACYGS---IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 A + + + E LL ++ + + G+ ++L +D+ K Sbjct: 591 KSLLKLVAAKAAESNVSRRVNLTGAEAADLLLRLQTASDPYRDASGQVAVVRLSQNDLSK 650 Query: 591 LFG 593 LF Sbjct: 651 LFK 653 >gi|325126231|gb|ADY85561.1| DNA mismatch repair protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 653 Score = 334 bits (856), Expect = 3e-89, Method: Composition-based stats. Identities = 144/663 (21%), Positives = 262/663 (39%), Gaps = 86/663 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+EN++DA++SR+ + G + DNG Sbjct: 3 KIHELSENLTNQIAAGEVIERPASVVKELVENAIDAQASRIRVEVQHSGLKQISVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKI D D NI T GFRGEAL SI AV+H+ +++ T Sbjct: 63 GIAPDQVDLAFMRHATSKIQDEHDLFNIATLGFRGEALASIAAVAHVEILTSTGGQ-TAT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + A +G GT + V D+F+ PARL +LKS + E I D++ R+A+ + Sbjct: 122 RAAFAGGVKKFQEDAGSAKGTKITVGDIFYNTPARLKYLKSPKTELLKIVDIVNRIALGH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++S T ++ + NGN + ++ + G + + + + TL G Sbjct: 182 PEISLTLASDGK---VLLRTPGNGNLKQDVANIYGRKVAEKMLTVENEDPDFTLYGLVSE 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + N + +NGR +++ + S + Y + G+YP+ VL +E DP VDVNV Sbjct: 239 ANLTRSSRNFISILLNGRYIKNYQLSSALLDGYGNKLG-GKYPIAVLAIEADPLLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I ++ +A+ + ++ D P Sbjct: 298 HPTKEEVRLSKEKELSRLITSAVTEALMDEDEASPLFQLTPFKDKTQLDQLEFNLKPNVV 357 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 T + L+ ++++ + + E + + + + Sbjct: 358 --DTRRPDDFQLEVSQVAEPEGKTDITNKKETETKETAEKKENKQEEKEEKTSAPEYVDL 415 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 +Q + V + + + + F + + + L+ +H Sbjct: 416 NQVREDDQYVLTKSWDQHVKEQTALPPFAGGEEAASP--------VTSKADQLLRQHLPA 467 Query: 480 LHRL----GIKAERFGPNAIAIREI---------------------------PAIL---- 504 L L G G + I ++ P + Sbjct: 468 LRLLGQMGGYLLAEHGGDLYLIDQVAARRRLEYDQILASLEKDENYQQGLLEPLVFDFSV 527 Query: 505 ----SKKNIPQLLRDIIDEIIDSSTTYTL----------------QDRIENILATM---- 540 K+ LLR + E+ D L ++ ++ +L++ Sbjct: 528 YDYQKLKDQLPLLRQLGLEMEDFGQNTLLMHSYPTWLKGEVTVQVRELLDQLLSSRKNDG 587 Query: 541 -------ACYGS---IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 A + + + E LL ++ + + G+ ++L +D+ K Sbjct: 588 KSLLKLVAAKAAESNVSRRVNLTGAEAADLLLRLQTASDPYRDASGQVAVVRLSQNDLSK 647 Query: 591 LFG 593 LF Sbjct: 648 LFK 650 >gi|317402324|gb|EFV82900.1| hypothetical protein HMPREF0005_00126 [Achromobacter xylosoxidans C54] Length = 410 Score = 333 bits (855), Expect = 4e-89, Method: Composition-based stats. Identities = 122/363 (33%), Positives = 204/363 (56%), Gaps = 12/363 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L + +I+QIAAGE+IERP+ +KE++EN++DA + +E + GGG +TD+G Sbjct: 49 SILALPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGG 108 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A+ RH TSKI + + ++ + GFRGEAL SI +V+ ++++SR Sbjct: 109 GIPPDELPLALARHATSKIRNLHELESVASMGFRGEALASIASVAQVSIISRTRDGEHAW 168 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 QI ++ P + PGT V+VR LF +PAR FL+SE E D + R+A+A+ Sbjct: 169 QIQAGSMQV---TPASGPPGTTVDVRQLFDAVPARRKFLRSEATEFGHCVDAMERIALAH 225 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+++F + + +RI V+G +F + + L+ ++L G Sbjct: 226 PQIAFRLFHHDRAQRQWLPAEPP----QRIRDVLGAEFAEHGLLLSHSVGTVSLAGMITR 281 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT R A++ Y+++NGR V+D+ + +R AYA+ + R P VL L+IDP VDVNV Sbjct: 282 PTAARARADRQYLYVNGRYVRDRTVSHALRAAYADVLHGDRQPAYVLFLDIDPAAVDVNV 341 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK +RFR+ + F+ ++ + + + G S++ ++ D+ +T P Sbjct: 342 HPAKHEVRFRDSGAVHRFVNHAVSQTLAQTGGSSA---VAPAAATRDDDDGFETVAPSAP 398 Query: 360 TSL 362 T+ Sbjct: 399 TAP 401 >gi|160900563|ref|YP_001566145.1| DNA mismatch repair protein MutL [Delftia acidovorans SPH-1] gi|160366147|gb|ABX37760.1| DNA mismatch repair protein MutL [Delftia acidovorans SPH-1] Length = 674 Score = 333 bits (854), Expect = 4e-89, Method: Composition-based stats. Identities = 116/327 (35%), Positives = 188/327 (57%), Gaps = 7/327 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ ++EL++N+LDA + ++ + GG + D+G Sbjct: 15 PIRDLPDELISQIAAGEVVERPASVVRELVDNALDAGARQINVRLLAGGVRLISVEDDGG 74 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+P+A++RH TSKI+D D + T GFRGEAL +I +VS +++SRP ++ Sbjct: 75 GIPRDELPVALRRHATSKITDLHDLETVATMGFRGEALAAICSVSEASILSRPAGQDSAY 134 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ RP A N GT VEV++LFF+ PAR FLKS+ E + +RR A+A Sbjct: 135 LLDARSGEL---RPAARNQGTTVEVKELFFSTPARRKFLKSDATELAHCIESVRRHALAR 191 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P V F + + + R+ V+G+ F+ N+V + S + + G Sbjct: 192 PDVGFAIWHEGKLVEQWRAAGSMSDEALARRLGDVLGDAFVQNSVTVEHWSGAVHVTGRA 251 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 GIP R + + ++NGR V+DK + R+AY + + + PV L +EIDP +VDV Sbjct: 252 GIPDAARSRPDHQFCYVNGRFVRDKVLTHASRSAYEDVLHGHKQPVYALYVEIDPARVDV 311 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQK 324 NVHP K +RFR+ + + +I+ Sbjct: 312 NVHPTKIEVRFRDSREVHQAVRHAIEN 338 Score = 218 bits (554), Expect = 3e-54, Method: Composition-based stats. Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 1/293 (0%) Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSL 362 ++ + F + + A ++ L + P Sbjct: 380 QARMSFGDEQGGHKVSNMAGLWAPMREAAPAPVALPAQTAMQTAGAAEVAVDTPGVQWPA 439 Query: 363 TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQT 422 + PS D +E T + LG A AQIH YI+++ Sbjct: 440 GDVPASYAPAAQPRPVTVSEPSPANFTPPAADTPAAAEETIWPLGRAVAQIHGVYILAEN 499 Query: 423 TDGLVIVDQHAAHERLIFEKMRQD-FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 G+V+VD HAAHER+++E+++ + +I SQ LL P E A H + L Sbjct: 500 AQGMVVVDMHAAHERIVYEQLKNAVNAAEQIPSQPLLIPATFAATPEEVATAEAHGDTLQ 559 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 LG++ F P +A+R +PA L++ + +L R ++ E+ + +Q ILATMA Sbjct: 560 ALGMEVSPFSPKTLAVRAVPATLAQGDAVELARSVLAELAQHDASTVVQRARNEILATMA 619 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C+G++R+ R++ EMN LLR+ME S QCNHGRPT+ ++ + +++ LF R Sbjct: 620 CHGAVRANRRLTLDEMNALLRQMEVTERSDQCNHGRPTWRQMSMKELDALFLR 672 >gi|219682467|ref|YP_002468851.1| DNA mismatch repair protein MutL [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254766163|sp|B8D891|MUTL_BUCAT RecName: Full=DNA mismatch repair protein mutL gi|219622200|gb|ACL30356.1| DNA mismatch repair protein MutL [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] Length = 584 Score = 333 bits (854), Expect = 5e-89, Method: Composition-based stats. Identities = 137/524 (26%), Positives = 255/524 (48%), Gaps = 12/524 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L + +QI+AGEIIERP+ +KE+IENS+DA S + ++ G + D+G Sbjct: 1 MPIRILPSDLSSQISAGEIIERPASVVKEIIENSIDAGSKNINIIVENSGFQSIILKDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ +AV H TSKI+ D + TFGFRGEAL SI AVS LTL+S N+ Sbjct: 61 CGIDKKDLLLAVCHHATSKINSLSDLDKLTTFGFRGEALASIRAVSRLTLISCTRFNDVA 120 Query: 119 AQIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 A+I + K ++P+A GT + V +LF+ IP RL FLK++++E + I +V++++A Sbjct: 121 AKIYLEGFCSKNIILQPIAHPEGTTIIVDNLFYNIPVRLKFLKNKKLEFSKICEVVKKIA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 +++ ++F+ + N + N R+ + + +E+ EK + L G+ Sbjct: 181 LSHFYINFSLKHNNKLITQYNSINNRKNKINRLKDIFDTLDTSEFLEIKEKKYRMVLFGW 240 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P + N Y ++N R + + ++ +R AY++ I + VL L I+ +D Sbjct: 241 ISHPYNFKKIKNIQYCYVNNRYLYNNIFVNAVRAAYSK-IEQKKNISFVLYLTIESFNID 299 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 +N+HP K+ I+F NP ++ FI +++ + K S K + +++ + + Sbjct: 300 INIHPTKNEIKFHNPDVVYTFIYEAVFSYLKKIKEKYYFNFSCKKQTQLNKEK--EFYFY 357 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 + +F ++ ++ N + + P+E+ E+ +G IH+ Sbjct: 358 DSDPTFLTLISSIFFKKKQIFKNIKNKIKHNNFISKSTPLEKYES---SIGRLLIIIHKY 414 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y + + +++ A + +K++ + I + L+ I+L E ++ Sbjct: 415 YGLIYHDNNFLLLSFPVAKGIVRKQKLKNNIQKENI-IEYFLSNIKINLTSQEYLILFNQ 473 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 E L + G F + + IPA L K N ++ + + Sbjct: 474 KEILSKFGFHL-IFKKKYVILSSIPAFLKKCNFHIIISNFFAFL 516 >gi|154497032|ref|ZP_02035728.1| hypothetical protein BACCAP_01325 [Bacteroides capillosus ATCC 29799] gi|150273431|gb|EDN00559.1| hypothetical protein BACCAP_01325 [Bacteroides capillosus ATCC 29799] Length = 684 Score = 333 bits (854), Expect = 6e-89, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 183/344 (53%), Gaps = 6/344 (1%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I++L + + IAAGE++ERP+ +KEL+EN++DA + V I GG S ++TDN Sbjct: 7 MPHIQQLDPHVADLIAAGEVVERPASVVKELVENAIDAGAETVTVEIQRGGMSLIRVTDN 66 Query: 60 GFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++E A RH TSKI D I T GFRGEAL +I AVS + L++R + + Sbjct: 67 GCGIAADEAETAFLRHATSKIRTEHDLEAIGTLGFRGEALAAIAAVSRVDLLTRTAEEDL 126 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 GA +++ G ++ S GT + VRDLFF PARL F+K + E + +++R+A+ Sbjct: 127 GAALSLEGGEVVSREEAGCPVGTTMVVRDLFFNTPARLKFMKKDAAEGAAVFAMVQRLAL 186 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P+VS F + +G + V+G D +E+ ++T+ G+T Sbjct: 187 AHPEVSMKFLRDGK---QELLTPGDGQMKSAVYSVLGRDLALGLIEVKGSGEDMTVTGFT 243 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P R + F+NGR V+ + +++ + AY +G++P VL L VDV Sbjct: 244 SLPACCRPTRGYQHFFVNGRYVKSRTMMAALEEAYQNQKMVGKFPACVLHLTCRLSGVDV 303 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM 341 NVHP K ++F N + + + ++ A+ + + + Sbjct: 304 NVHPTKQEVKFGNERQVFSAVYYAVLSALEGDKSHVQAQVGRPA 347 Score = 143 bits (361), Expect = 7e-32, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 7/260 (2%) Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTN-TQEKLFLQENR--LSTNDLLPSDDPTYSEDND 394 + + P + +EK+ L E + P + + E Sbjct: 428 PMPEQPVIRPEKPAEIVTPAPEKAPAPIPEEKMILPEPVELPEEKPVPPVQEVSEPEVQP 487 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 + ++ YII + D ++++D+HAAHER+ F+K++ + Sbjct: 488 EPVPQQPQEEIPWRVAGEVLNTYIIVEQGDKVLLIDKHAAHERMNFDKLKAQGYQPMVQ- 546 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 LLTP + E A+++++ L + G AE FG AI +R P + +++P L Sbjct: 547 -NLLTPAVFTPPAEEGAVLLQNLPLLSQFGFDAEDFGGGAIIVRAAPGDVDAEDVPATLE 605 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 +I +++ + + ++ TMAC +I+ G+K E+ ++ + + C Sbjct: 606 EIAAKLLTTGRANP-DAARDELMHTMACKAAIKGGQKNGPQELEKVAGAVMRGE-VKYCP 663 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRP I+L +EK F R Sbjct: 664 HGRPVAIELTRGQLEKQFKR 683 >gi|116514519|ref|YP_813425.1| DNA mismatch repair protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122274749|sp|Q048Y5|MUTL_LACDB RecName: Full=DNA mismatch repair protein mutL gi|116093834|gb|ABJ58987.1| DNA mismatch repair protein MutL [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 653 Score = 333 bits (854), Expect = 6e-89, Method: Composition-based stats. Identities = 144/663 (21%), Positives = 262/663 (39%), Gaps = 86/663 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+EN++DA++SR+ + G + DNG Sbjct: 3 KIHELSENLTNQIAAGEVIERPASVVKELVENAIDAQASRIRVEVQHSGLKQISVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKI D D NI T GFRGEAL SI AV+H+ +++ T Sbjct: 63 GIAPDQVDLAFMRHATSKIQDEHDLFNIATLGFRGEALASIAAVAHVEILTSTGGQ-TAT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + A +G GT + V D+F+ PARL +LKS + E I D++ R+A+ + Sbjct: 122 RAAFAGGVKKFQEDAGSAKGTKITVGDIFYNTPARLKYLKSPKTELLKIVDIVNRIALGH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++S T ++ + NGN + ++ + G + + + + TL G Sbjct: 182 PEISLTLASDGK---VLLRTPGNGNLKQDVANIYGRKVAEKMLTVENEDPDFTLYGLVSE 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + N + +NGR +++ + S + Y + G+YP+ VL +E DP VDVNV Sbjct: 239 ANLTRSSRNFISILLNGRYIKNYQLSSALLDGYGNKLG-GKYPIAVLAIEADPLLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I ++ +A+ + ++ D P Sbjct: 298 HPTKEEVRLSKEKELSRLITSAVTEALMDEDEASPLFQLTPFKDKTQLDQLEFNLKPNVV 357 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 T + L+ ++++ + + E + + + + Sbjct: 358 --DTRRPDDFQLEVSQVAEPEGKTDITNKKGTETKEKAEKKENKQEEKEEKTSAPEYVDL 415 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 +Q + V + + + + F + + + L+ +H Sbjct: 416 NQVREDDQYVLTKSWDQHVKEQTALPPFAGGEEAASP--------VTSKADQLLRQHLPA 467 Query: 480 LHRL----GIKAERFGPNAIAIREI---------------------------PAIL---- 504 L L G G + I ++ P + Sbjct: 468 LRLLGQMEGYLLAEHGGDLYLIDQVAARRRLEYDQILASLEKDENYQQGLLEPLVFDFSV 527 Query: 505 ----SKKNIPQLLRDIIDEIIDSSTTYTL----------------QDRIENILATM---- 540 K+ LLR + E+ D L ++ ++ +L++ Sbjct: 528 YDYQKLKDQLPLLRQLGLEMEDFGQNTLLMHSYPTWLKGEVTVQVRELLDQLLSSRENDG 587 Query: 541 -------ACYGS---IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 A + + + E LL ++ + + G+ ++L +D+ K Sbjct: 588 KSLLKLVAAKAAESNVSRRVNLTGAEAADLLLRLQTASDPYRDASGQVAVVRLSQNDLSK 647 Query: 591 LFG 593 LF Sbjct: 648 LFK 650 >gi|149183968|ref|ZP_01862344.1| DNA mismatch repair protein [Bacillus sp. SG-1] gi|148848324|gb|EDL62598.1| DNA mismatch repair protein [Bacillus sp. SG-1] Length = 529 Score = 333 bits (853), Expect = 6e-89, Method: Composition-based stats. Identities = 135/532 (25%), Positives = 239/532 (44%), Gaps = 44/532 (8%) Query: 102 AVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE 161 +VSHL + + G +I + G + + + GT + V LFF PARL ++K+ Sbjct: 1 SVSHLEMNTSTGDGP-GVKIKLQGGSVVTQEKSSSRKGTDITVSSLFFNTPARLKYMKTI 59 Query: 162 QVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA 221 E ITDV R+A+++P+VS + + NG+ + ++ + G + Sbjct: 60 HTELGNITDVANRIALSHPEVSIKLIHNGK---TLLHTNGNGDVRQVLAAIYGTNIARKM 116 Query: 222 VELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY 281 V + S + T++GY +P R + N INGR +++ + I Y +P+GRY Sbjct: 117 VRIEASSLDFTVKGYISLPEITRASRNYISTMINGRFIKNYGLAKAIGEGYHTLLPIGRY 176 Query: 282 PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM 341 P+V+L +E+DP VDVNVHP+K +R + + +I+ A K + S K Sbjct: 177 PIVLLSIEMDPLLVDVNVHPSKMEVRISKEPELFELVSGAIKDAFKTKELIPSGYKEPKP 236 Query: 342 ISS------------FHQDNAPKTHLPKYATSLTNTQEKLFLQE---------------- 373 + + AP Y T QE+ + E Sbjct: 237 MKPKSEQTTLTLDHLSENNRAPVQLEKTYQKDETRQQERAYQPEQLPAKEVMELLYKQDD 296 Query: 374 -----------NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQT 422 + + + P+ ++ P EE + Q+H YI +Q Sbjct: 297 DLLEEEDTSTISAVYEEPPEVNSAPSGNQQQQPDEEQNPSRVPPLYPVGQMHGTYIFAQN 356 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 +GL I+DQHAA ER+ +E R+ + Q +L P ++ E I+EH ++L + Sbjct: 357 ENGLYIIDQHAAQERIKYEYYREKVGKVENELQEMLVPITLEYSADEYMKIIEHKDELEK 416 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMAC 542 +G+ E FG N+ IR P L +L+ ++I+++++ ++ E M+C Sbjct: 417 VGVFLEEFGHNSFIIRSHPQWLPAGQEGELIDEMIEQLLNMKKVD-IKKLREEAAIMMSC 475 Query: 543 YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SI++ + +++ E+ LL E+ ++ + C HGRP I + ++EK+F R Sbjct: 476 KASIKANQYLKNEEIQALLDELRRSEDPFTCPHGRPIIIHYSVYEMEKMFKR 527 >gi|15617161|ref|NP_240374.1| DNA mismatch repair protein MutL [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11386926|sp|P57633|MUTL_BUCAI RecName: Full=DNA mismatch repair protein mutL gi|25403655|pir||D84996 DNA mismatch repair protein mutL [imported] - Buchnera sp. (strain APS) gi|10039226|dbj|BAB13260.1| DNA mismatch repair protein mutL [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 584 Score = 333 bits (853), Expect = 7e-89, Method: Composition-based stats. Identities = 138/524 (26%), Positives = 256/524 (48%), Gaps = 12/524 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L + +QI+AGEIIERP+ +KE+IENS+DA S + ++ G + D+G Sbjct: 1 MPIRILPSDLSSQISAGEIIERPASVVKEIIENSIDAGSKNINIIVENSGFQSIILKDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ +AV H TSKI+ D + TFGFRGEAL SI AVS LTL+S N+ Sbjct: 61 CGIDKKDLLLAVCHHATSKINSLSDLDKLTTFGFRGEALASIRAVSRLTLISCTRFNDVA 120 Query: 119 AQIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 A+I + K ++P+A GT + V +LF+ IP RL FLK++++E + I +V++++A Sbjct: 121 AKIYLEGFCSKNIILQPIAHPEGTTIIVDNLFYNIPVRLKFLKNKKLEFSKICEVVKKIA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 +++ ++F+ + N + N R+ + + +E+ EK + L G+ Sbjct: 181 LSHFYINFSLKHNNKLITQYNSINNRKNKINRLKDIFDTLDTSEFLEIKEKKYRMVLFGW 240 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P + N Y ++N R + + ++ +R AY++ I + VL L I+ +D Sbjct: 241 ISHPYNFKKIKNIQYCYVNNRYLYNNIFVNAVRAAYSK-IEQKKNISFVLYLTIESFNID 299 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 +N+HP K+ I+F NP ++ FI +++ + K S K + +++ + + Sbjct: 300 INIHPTKNEIKFHNPDVVYTFIYEAVFSYLKKIKEKYYFNFSCKKQTQLNKEK--EFYFY 357 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 + +FL++ ++ N + + P+E+ E+ +G IH+ Sbjct: 358 DSDPTFLTLISSIFLKKKQICKNIKNKIKHNNFISKSTPLEKYES---SIGRLLIIIHKY 414 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y + + +++ A + +K++ + I + L+ I+L E ++ Sbjct: 415 YGLIYHDNNFLLLSFPVAKGIVRKQKLKNNIQKENI-IEYFLSNIKINLTSQEYLILFNK 473 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 E L + G F + + IPA L K N ++ + + Sbjct: 474 KEILSKFGFHL-IFKKKYVILSSIPAFLKKCNFHIIISNFFAFL 516 >gi|219681912|ref|YP_002468298.1| DNA mismatch repair protein MutL [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471618|ref|ZP_05635617.1| DNA mismatch repair protein MutL [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254766162|sp|B8D8D4|MUTL_BUCA5 RecName: Full=DNA mismatch repair protein mutL gi|219624755|gb|ACL30910.1| DNA mismatch repair protein MutL [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086290|gb|ADP66372.1| DNA mismatch repair protein MutL [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311087454|gb|ADP67534.1| DNA mismatch repair protein MutL [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 584 Score = 333 bits (853), Expect = 7e-89, Method: Composition-based stats. Identities = 137/524 (26%), Positives = 255/524 (48%), Gaps = 12/524 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L + +QI+AGEIIERP+ +KE+IENS+DA S + ++ G + D+G Sbjct: 1 MPIRILPSDLSSQISAGEIIERPASVVKEIIENSIDAGSKNINIIVENSGFQSIILKDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ +AV H TSKI+ D + TFGFRGEAL SI AVS LTL+S N+ Sbjct: 61 CGIDKKDLLLAVCHHATSKINSLSDLDKLTTFGFRGEALASIRAVSRLTLISCTRFNDVA 120 Query: 119 AQIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 A+I + K ++P+A GT + V +LF+ IP RL FLK++++E + I +V++++A Sbjct: 121 AKIYLEGFCSKNIILQPIAHPEGTTIIVDNLFYNIPVRLKFLKNKKLEFSKICEVVKKIA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 +++ ++F+ + N + N R+ + + +E+ EK + L G+ Sbjct: 181 LSHFYINFSLKHNNKLITQYNSINNRKNKINRLKDIFDTLDTSEFLEIKEKKYRMVLFGW 240 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P + N Y ++N R + + ++ +R AY++ I + VL L I+ +D Sbjct: 241 ISHPYNFKKIKNIQYCYVNNRYLYNNIFVNAVRAAYSK-IEQKKNISFVLYLTIESFNID 299 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 +N+HP K+ I+F NP ++ FI +++ + K S K + +++ + + Sbjct: 300 INIHPTKNEIKFHNPDVVYTFIYEAVFSYLKKIKEKYYFNFSCKKQTQLNKEK--EFYFY 357 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 + +F ++ ++ N + + P+E+ E+ +G IH+ Sbjct: 358 DSDPTFLTLISSIFFKKKQIFKNIKNKIKHNNFISKSTPLEKYES---SIGRLLIIIHKY 414 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y + + +++ A + +K++ + I + L+ I+L E ++ Sbjct: 415 YGLIYHDNNFLLLSFPVAKGIVRKQKLKNNIQKENI-IEYFLSNIKINLTSQEYLILFNK 473 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 E L + G F + + IPA L K N ++ + + Sbjct: 474 KEILSKFGFHL-IFKKKYVILSSIPAFLKKCNFHIIISNFFAFL 516 >gi|313903995|ref|ZP_07837375.1| DNA mismatch repair protein MutL [Eubacterium cellulosolvens 6] gi|313471144|gb|EFR66466.1| DNA mismatch repair protein MutL [Eubacterium cellulosolvens 6] Length = 772 Score = 332 bits (850), Expect = 1e-88, Method: Composition-based stats. Identities = 124/366 (33%), Positives = 194/366 (53%), Gaps = 6/366 (1%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M+ I L ++ I+QIAAGE++ERP+ IKEL EN++DA ++ V I GG +F +ITDN Sbjct: 1 MRSIELLDKQTIDQIAAGEVVERPASVIKELTENAIDAGATAVTIEIRDGGTTFMRITDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++++ A RH TSKI +D NI + GFRGEAL SI AV+ + +++ P+ T Sbjct: 61 GAGIPADQVKKAFLRHATSKIRKAEDLVNIASLGFRGEALSSISAVAQVECITKTPEALT 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G + GT +R+LFF PAR FLK+ E N ++ + +A+ Sbjct: 121 GIRYCIEGGVEKEYEEIGAPGGTTFIIRNLFFNTPARAKFLKAPVTEGNHVSSFVEELAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P++SF F N+ + S NGN E + Q+ G D V ++ ++ + + G+ Sbjct: 181 SHPEISFKFIQNGQNKL---YTSGNGNLKEIVYQIFGRDLTRELVAVDARTELMHVHGFI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G P RGN FINGR V++K I I AY + +YP +L L+I +VDV Sbjct: 238 GNPNVARGNRTFENYFINGRYVKNKVIAKAIEDAYHGFLMQHKYPFTLLYLDIVSEKVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K +R + + + + +IQ A+ + L ++ + Q A + Sbjct: 298 NVHPQKLEVRISDQEGVYHQLCLTIQNALMNRERIPEVPLGREHADASRQKEAERIRQMN 357 Query: 358 YATSLT 363 Sbjct: 358 RNVPEP 363 Score = 207 bits (528), Expect = 3e-51, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 12/294 (4%) Query: 311 PTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLF 370 + I +S ++ +S + +D++ A+ + QE Sbjct: 479 EDSLIPEIPESPLDVLSSNENGSSETGGEAAAEIRTEDHSEIAKEVSSASVASYEQESEQ 538 Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEES----------EATHYQLGIACAQIHQNYIIS 420 E+ + D + E Q+ Q+ Y + Sbjct: 539 TVESVREADAAYTVDKIAEQKRAGTKPEQLNLFEEDKVLSEQARQMFRLIGQVFDTYWMI 598 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 + D L I+DQHAAHE++ +E+M + + I SQ L ++DL E L+ + + Sbjct: 599 EYKDSLYIIDQHAAHEKVNYERMMKAYREKTIHSQMLYPSIVLDLSRREAQLLESNLKTF 658 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 LG + E FG N+ I +PA L +L I+ E+ I LA+M Sbjct: 659 EDLGFEVESFGGNSFKINAVPANLYSVASDELFMQILAELESLGEVS--PKLIPEKLASM 716 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C +++ ++ E N L+ E+ N C HGRPT I + +++K F R Sbjct: 717 SCKAAVKGNNRLSVEEANALIDELLTLENPYNCPHGRPTIISMTRYEMDKKFKR 770 >gi|313124268|ref|YP_004034527.1| DNA mismatch repair protein mutl [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280831|gb|ADQ61550.1| DNA mismatch repair protein mutL [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 651 Score = 332 bits (850), Expect = 1e-88, Method: Composition-based stats. Identities = 144/663 (21%), Positives = 264/663 (39%), Gaps = 88/663 (13%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+EN++DA++SR+ + G + DNG Sbjct: 3 KIHELSENLTNQIAAGEVIERPASVVKELVENAIDAQASRIRVEVQHSGLKQISVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKI D D NI T GFRGEAL SI AV+H+ +++ T Sbjct: 63 GIAPDQVDLAFMRHATSKIQDEHDLFNIATLGFRGEALASIAAVAHVEILT-SIDGQTAT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + A +G GT + V D+F+ PARL +LKS + E I D++ R+A+ + Sbjct: 122 RAAFAGGVKKFQEDAGSAKGTKITVGDIFYNTPARLKYLKSPKTELLKIVDIVNRIALGH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++S T ++ + NGN + ++ + G + + + + TL G Sbjct: 182 PEISLTLASDGK---VLLRTPGNGNLKQAVANIYGRKVAEKMLTVENEDPDFTLYGLVSE 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + N + +NGR +++ + S + Y + G+YP+ VL +E DP VDVNV Sbjct: 239 ANLTRSSRNFISILLNGRYIKNYQLSSALLDGYGNKLG-GKYPIAVLAIEADPLLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R + I ++ +A+ + ++ ++ F Sbjct: 298 HPTKEEVRLSKEKELSRLITSAVTEALMDEDEASPLF----QLTPFKDKTQLDQLEFNLK 353 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 ++ +T+ Q + D T ++ E + + + + Sbjct: 354 PNVVDTRRPDDFQLEVSQVAEPEGKTDITNKKETKETAEKKENKQEEKEEKTSAPEYVDL 413 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 +Q + V + + + + F + + + L+ +H Sbjct: 414 NQVREDDQYVLTKSWDQHVKEQTALPPFAGGEEAASP--------VTSKADQLLRQHLPA 465 Query: 480 LHRL----GIKAERFGPNAIAIREI---------------------------PAIL---- 504 L L G G + + ++ P + Sbjct: 466 LRLLGQMGGYLLAEHGGDLYLLDQVAARRRLEYDQILASLEKDENYQQGLLEPLVFDFSV 525 Query: 505 ----SKKNIPQLLRDIIDEIIDSSTTYTL----------------QDRIENILATM---- 540 K+ LLR + E+ D L ++ ++ +L++ Sbjct: 526 YDYQKLKDQLPLLRQLGLEMEDFGQNTLLMHSYPTWLKGEVTVQVRELLDQLLSSRENDG 585 Query: 541 -------ACYGS---IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 A + + + E LL ++ + + G+ ++L +D+ K Sbjct: 586 KSLLKLVAAKAAESNVSRRVNLTGAEAADLLLRLQTASDPYRDASGQVAVVRLSQNDLSK 645 Query: 591 LFG 593 LF Sbjct: 646 LFK 648 >gi|257439841|ref|ZP_05615596.1| DNA mismatch repair protein MutL [Faecalibacterium prausnitzii A2-165] gi|257197750|gb|EEU96034.1| DNA mismatch repair protein MutL [Faecalibacterium prausnitzii A2-165] Length = 716 Score = 331 bits (849), Expect = 2e-88, Method: Composition-based stats. Identities = 115/330 (34%), Positives = 188/330 (56%), Gaps = 5/330 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + IAAGE++ERP+ +KEL+EN++DA +S++ I GG +I+DNG G Sbjct: 4 IHVLDKHTAELIAAGEVVERPASVVKELLENAIDAGASQITVTIESGGVKLIEISDNGSG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E IP A RH TSKI DD ++IHT GFRGEAL SI +V+ + +++R + + Sbjct: 64 IEAEYIPTAFIRHATSKIRTEDDLNHIHTLGFRGEALASIASVARVEVLTRTENDECASV 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + + P A GT + V+DLF+ PAR+ FLK + E + D++ +A+++P Sbjct: 124 YRIEGGEDYPLEPGARGVGTTIRVQDLFYNTPARMKFLKKDSSEGTFVADIVAHVALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +VSF F +Y +G V+G +F + +EL+ + + G P Sbjct: 184 EVSFKFVREGKLQYV---TPGDGKLRSAAYAVLGREFSRDLMELDNQEGVYRVWGLITQP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + Y +INGR V+++ +++ + TA+ T G++P +LLLE+ VDVNVH Sbjct: 241 RSCRASRSMQYFYINGRYVRNRTMMAAMETAFKGTTMQGKFPGGILLLEMPADLVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 PAK+ +RF I + + +++ A+ + G Sbjct: 301 PAKTEVRFARENDIFDLVYHAVKLALAQPG 330 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 59/243 (24%), Positives = 118/243 (48%), Gaps = 7/243 (2%) Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 LP++ + + + + T + V+E A Sbjct: 479 SADLPEHQDHMAAWDPAPKEEMPAAPAPQQTSAAEDTPEQLGFDVQEGPAP----LRYVG 534 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 +I + YI+++ + + I+D+HAAHER +FEK+ ++ + +Q LL P +++L E Sbjct: 535 EIFKTYILAERGEEICIIDKHAAHERQLFEKLAANY--GDVPAQLLLEPLVVELSAEEKT 592 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 ++ + E L G++ + FG N++ +R +PA + + + LL ++ D++ + L + Sbjct: 593 ALLSNLELLESAGLEIDDFGGNSVFLRSVPADVEQGSAEDLLVELADKLS-KGSRDALSE 651 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 + E +L +++C +I++G K E+ L ++ C HGRP +KL ++EK Sbjct: 652 KTEWVLHSISCRAAIKAGDKTSPQELMALAEKILSGEVPPFCPHGRPCVLKLTRKELEKQ 711 Query: 592 FGR 594 FGR Sbjct: 712 FGR 714 >gi|317131678|ref|YP_004090992.1| DNA mismatch repair protein MutL [Ethanoligenens harbinense YUAN-3] gi|315469657|gb|ADU26261.1| DNA mismatch repair protein MutL [Ethanoligenens harbinense YUAN-3] Length = 669 Score = 330 bits (847), Expect = 3e-88, Method: Composition-based stats. Identities = 115/361 (31%), Positives = 192/361 (53%), Gaps = 5/361 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L + + +IAAGE++ERP+ +KEL+EN++DA ++ + I GG F ++TD+G Sbjct: 3 RIQVLPKAVAEKIAAGEVVERPASVVKELLENAIDAGAAALTLEIQNGGVRFIRVTDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ A RH TSK+ D I T GFRGEAL S+ AVS + L++R G Sbjct: 63 GIPAEDVATAFLRHATSKVHTDGDLEAIGTLGFRGEALASVTAVSKVELITRTADELEGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +IA++G ++ P GT + VRDLF+ PAR+ FLK + E N + V R+A+++ Sbjct: 123 RIALAGGEVLEQGPAGCPQGTTILVRDLFYNTPARMKFLKKDVTEGNAVRAVAERLALSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++S F +G + V+G DF + + ++ + + G+ Sbjct: 183 PEISLKFIKDGREELH---TPGDGKLLSAVHAVLGRDFARDLLPVDYALGSVRITGFVLK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N N + F+NGR V+ + ++ + AY +I +GR+P VL + + P VDVNV Sbjct: 240 PVSARANRNMQFFFLNGRLVKSRTAMAALEQAYKGSIMVGRFPGCVLHIALPPALVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ +RF + + + +++ I +K + L + AP +A Sbjct: 300 HPAKTEVRFADEHAVFEAVYYAVKNTIAEKDTRPALRLPGTEQAKPAPFAAPGGSQLHFA 359 Query: 360 T 360 Sbjct: 360 P 360 Score = 159 bits (401), Expect = 2e-36, Method: Composition-based stats. Identities = 66/278 (23%), Positives = 113/278 (40%), Gaps = 11/278 (3%) Query: 324 KAINKKGISTSSVLSKKMIS-SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLL 382 A+ K +S +S + Q A P A LST+ + Sbjct: 395 PALPKWPDRPASAFRASPLSKAGGQTVARAVDSPVAAPGAAPEAGHTVPHTGGLSTHPDV 454 Query: 383 P------SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 P + P E Q + YI+ + D L ++D+HAAHE Sbjct: 455 PVETGSPQQTVSEQVVTAPPAVEEGVQPPALRVVGQCFETYILVEEGDALYLIDKHAAHE 514 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 R+++E++++ + Q LL P + L E A ++E+ L G E FG + Sbjct: 515 RILYEEIKKQGQAAG---QLLLAPRAVTLAREEYAAVLENFALLRETGFDMEDFGGATVL 571 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +R P L + I + ++ ++ T +RI+ + ++AC ++++G K E Sbjct: 572 VRSAPVYLRESEIVPAVEELAGKLAGFGKDLT-PERIDELYHSVACRAAVKAGDKTGPEE 630 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 RL + + + + C HGRP L +IEK FGR Sbjct: 631 AARLAKRVLELDDVRYCPHGRPVAFVLTRGEIEKQFGR 668 >gi|228928817|ref|ZP_04091850.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228830842|gb|EEM76446.1| DNA mismatch repair protein mutL [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 548 Score = 330 bits (847), Expect = 3e-88, Method: Composition-based stats. Identities = 137/551 (24%), Positives = 236/551 (42%), Gaps = 58/551 (10%) Query: 97 LPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLN 156 +PSI +VS L L++ G + I G I A GT + V++LFF PARL Sbjct: 1 MPSIASVSELELITSTGDAP-GTHLIIKGGDIIKQEKTASRKGTDITVQNLFFNTPARLK 59 Query: 157 FLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGED 216 ++K+ E ITD++ R+A+++P+VS + K+ S NG+ + ++ + Sbjct: 60 YMKTIHTELGNITDIVYRIAMSHPEVSLKLFHNEK---KLLHTSGNGDVRQVLASIYSIQ 116 Query: 217 FINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 V + +S + T++GY +P R + N +NGR V++ ++ I+ Y + Sbjct: 117 VAKKLVPIEAESLDFTIKGYVTLPEVTRASRNYMSTIVNGRYVRNFVLMKAIQQGYHTLL 176 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 P+GRYP+ L +E+DP VDVNVHPAK +RF + I +++Q A K + + Sbjct: 177 PVGRYPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAG 236 Query: 337 LSKKM------------------------------------------------ISSFHQD 348 ++ K Q+ Sbjct: 237 VTTKKKEKDESVQEQFQFEHAKPKEPSMPEIVLPTGMDEKQEEPQAVKQPTQLWQPPKQE 296 Query: 349 NAPKTHL----PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATH 403 P L + S E+ +E +N+ + E + E E Sbjct: 297 WQPPQSLVREEQSWQPSTKPIIEEPIQEEKSWDSNEEGFELEELEEEVREIKEIEMNGND 356 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 Q+H YI +Q GL ++DQHAA ER+ +E R Q LL P I Sbjct: 357 LPPLYPIGQMHGTYIFAQNDKGLYMIDQHAAQERINYEYFRDKVGRVAQEVQELLVPYRI 416 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 DL E + E E+L ++G+ E+FG + +R P K +++ +++++++ Sbjct: 417 DLSLTEFLRVEEQLEELKKVGLFLEQFGHQSFIVRSHPTWFPKGQETEIIDEMMEQVVKL 476 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ E M+C SI++ + + + ++ LL E+ N C HGRP + Sbjct: 477 KKVD-IKKLREEAAIMMSCKASIKANQYLTNDQIFALLEELRTTTNPYTCPHGRPILVHH 535 Query: 584 KLSDIEKLFGR 594 ++EK+F R Sbjct: 536 STYELEKMFKR 546 >gi|222480637|ref|YP_002566874.1| MutL dimerisation [Halorubrum lacusprofundi ATCC 49239] gi|222453539|gb|ACM57804.1| MutL dimerisation [Halorubrum lacusprofundi ATCC 49239] Length = 584 Score = 330 bits (846), Expect = 4e-88, Method: Composition-based stats. Identities = 148/619 (23%), Positives = 257/619 (41%), Gaps = 79/619 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++R+L +++IAAGE++ RP+ + ELI+N+LDA +SRVE + G G ++ D+G Sbjct: 17 RVRRLDPATVDRIAAGEVVTRPARVVGELIDNALDAGASRVEVAVEGDGTDRIRVDDDGR 76 Query: 62 GMTSEEIPMAVQRHCTSKISDDFS--NIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E+ +AV+RH TSK++ D + + GFRGEAL +I + L L++ + G Sbjct: 77 GMSREDARLAVERHATSKLAPDGDPVGVGSLGFRGEALAAIAEAARLELVT-SDGDPVGT 135 Query: 120 QIA------ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR 173 ++ +V GT V V DLF T PAR L E ++ ++ Sbjct: 136 RVVVGGAASDLDSDGPAVTDAGRARGTTVVVEDLFATRPARRESLAGSAAEFARVSSLVA 195 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--- 230 A+A P V+FT S + E + V + + + E+ Sbjct: 196 DYALANPGVAFTLDHDGSRTLS----TPGSGITEALLGVYDRETASRSTEIAASVEIERE 251 Query: 231 -------------ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP 277 + + G P+ R + + V +NGR V++ + + +R Y +P Sbjct: 252 GGGVGGDGAASTAVEVAGALAYPSVTRSSRDHVRVSVNGRPVRNDRLAAAVRAGYGRLLP 311 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL 337 GR PV + + + P +VD NVHPAK + R+ + + + + A+ + + + Sbjct: 312 DGREPVATIDVSLQPARVDPNVHPAKREVGLRDADAVADAVESVVADALTGADLRRKAEV 371 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 + + E Sbjct: 372 ETGLDGALEPVGGE---------------------------------------------E 386 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + Y++ + D L++VD HAAHER+ +E + + F+ + + L Sbjct: 387 GERLATFADADPIGTFCDLYLLVEAGDELLVVDGHAAHERVNYEWLARAFDGEAVPTADL 446 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 P + L E A H + L LG + E FG + +R +PA RD + Sbjct: 447 DPPVAVSLSADEAAAAEAHADALAALGFETEPFGGGTVRLRTVPAPFGHAVDATAFRDAL 506 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRK--MQSIEMNRLLREMEKNPNSSQCNH 575 + S + +D E +LA +AC+ S++ G + + E+ LL + + C H Sbjct: 507 ATL---SGGASPRDARETLLADLACHPSLKRGEIGDLDAEELRSLLDRLGECDRPYACPH 563 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRPT + + + FGR Sbjct: 564 GRPTVLSVDEATFAAGFGR 582 >gi|8928224|sp|P74925|MUTL_THEMA RecName: Full=DNA mismatch repair protein mutL gi|1575786|gb|AAB09596.1| DNA mismatch repair protein [Thermotoga maritima] Length = 510 Score = 330 bits (846), Expect = 4e-88, Method: Composition-based stats. Identities = 150/596 (25%), Positives = 258/596 (43%), Gaps = 88/596 (14%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+I++L E ++ +IAAGE+I PS +KEL+ENSLDA++ R+ I GGK+ +++DNG Sbjct: 1 MRIKRLPESLVRKIAAGEVIHNPSFVLKELVENSLDAQADRIVVEIENGGKNMVRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GMT EE +A++ + TSKI +D I T+GFRGEAL SI VS ++++ ++ Sbjct: 61 IGMTREEALLAIEPYTTSKIESEEDLHRIRTYGFRGEALASIVQVSRAKIVTKTEKDALA 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 Q+ I+G K+ + + GT VEVRDLFF +P R LKS +E + ++ R + Sbjct: 121 TQLMIAGGKVEEISETHRDTGTTVEVRDLFFNLPVRRKSLKSSAIELRMCREMFERFVLV 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 V F F++ ++ N ER + +I ED + E+ + + ++G Sbjct: 181 RNDVDFVFTSDGKI---VHSFPRTQNIFER-ALLILEDLRKGYITFEEELSGLRIKGIVS 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 R + Y ++NGR V + + + Y +P YPV VL +E+ Sbjct: 237 SREVTRSSRTGEYFYVNGRFVVSEELHEVLMKVYD--LPKRSYPVAVLFIEV-------- 286 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 +P + + I+ F+ +++ K+ Sbjct: 287 -NPEELDVNIHPSKIVVKFL---------------------------NEEKVKKSLEETL 318 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 +L + E S V E+ + + + Y Sbjct: 319 KRNLARKWYRSVAYEE--------------ISSRALSVAEAPSHRW------FLVKGKYA 358 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + + DGL+ VD HA HER I+E++ + K + +T L E + Sbjct: 359 VVEVEDGLLFVDLHALHERTIYEEILSKKSWGKRRVKRNIT----------VVLSREEKQ 408 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 L G + A+ + EIP L++ + + RD + ++++ +A Sbjct: 409 KLEEYGFSFQGE-EGALKVIEIPEFLTEDVVEEFFRDF-----------PVDEKLKERIA 456 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC + +SG E+ L ++ +C HGRP K+ D+++ F R Sbjct: 457 LAACKLATKSGEF--DEEIASKLLDVFFKKRFERCPHGRPISFKISYEDMDRFFER 510 >gi|292654719|ref|YP_003534616.1| DNA mismatch repair protein MutL [Haloferax volcanii DS2] gi|291370271|gb|ADE02498.1| DNA mismatch repair protein mutL [Haloferax volcanii DS2] Length = 735 Score = 330 bits (846), Expect = 4e-88, Method: Composition-based stats. Identities = 126/404 (31%), Positives = 200/404 (49%), Gaps = 15/404 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L EK + +IAAGE++ERP+ +KEL ENSLDA+++R+ + GG +I D+G G Sbjct: 4 IKQLDEKTVQRIAAGEVVERPASVVKELFENSLDADATRISVAVDAGGVEGVRIRDDGVG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 M+ E++ +AV+ H TSKI D D + T GFRGEAL +IGAVS LT+ S+P + G Sbjct: 64 MSEEDLELAVREHTTSKIGDIEDLEAGVGTLGFRGEALHTIGAVSRLTIRSKPRGGDVGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ G ++ S+RP GT+VEV DLF+ PAR FLK+ E + + V+ A+A Sbjct: 124 ELQYEGGEVESIRPAGCPKGTVVEVDDLFYNTPARRKFLKTTATEFDHVNAVVTHYALAN 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ + + G+ + V G + + V ++ + +++ G Sbjct: 184 PDVAVSLEHDDREVF---ATEGRGDLQSTVLSVYGREVAESMVPVDHDAPGVSVSGLVSH 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + F+N R V D+ + + AY + RYP VL +E+ P VDVNV Sbjct: 241 PETTRSTRDYLSTFVNDRYVTDRVLREAVLDAYGGQLDADRYPFAVLFVEVAPDAVDVNV 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +R+ + ++ + ++++ A+ G+ SS + + Sbjct: 301 HPRKMEVRWDDEAGVKREVTEAVEDALLSHGLVRSSAPRGRSKAD---------EAAIEP 351 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 S + +L E R S D DD D EA Sbjct: 352 GSSGDDATQLDPHEVRESEPDGETDDDADPPSARDVQSAREARE 395 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 69/280 (24%), Positives = 117/280 (41%), Gaps = 18/280 (6%) Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 TS S D AP + ++ T+ + + S+ D D+ S Sbjct: 445 PTSVPSSAPPTPPREYDLAPGPETTEQSSLSTDDGSESRSTPDEASSVDSGADDNAPRSP 504 Query: 392 DNDPVEES--------------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 + + E Q+ YI+++T +GLV+VDQHAA ER Sbjct: 505 PSRIAAPTTQRDLSGEEADLSPEFDSLPSMRIIGQLSDTYIVAETDEGLVLVDQHAADER 564 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 + +E++R + +Q L P ++L E AL E+ E L ++G A R G +++ Sbjct: 565 VNYERLRGEVEGDT-PTQALAEPVDLELTAREAALFEEYREALAQVGFHAGRTGERTVSV 623 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDS---STTYTLQDRIENILATMACYGSIRSGRKMQS 554 R +PA+ P+LLRD + + T+ + +L+ +ACY SI ++ Sbjct: 624 RTVPAVFDAALDPELLRDALTAFVREEVDGGRKTVDAVADELLSDLACYPSITGNTSLRE 683 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + LL ++ N C HGRP ++ +I F R Sbjct: 684 GSVLDLLAALDDCENPYACPHGRPVIVEFDRDEIASRFER 723 >gi|311086866|gb|ADP66947.1| DNA mismatch repair protein MutL [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 584 Score = 330 bits (845), Expect = 5e-88, Method: Composition-based stats. Identities = 137/524 (26%), Positives = 255/524 (48%), Gaps = 12/524 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L + +QI+AGEIIERP+ +KE+IENS+DA S + ++ G + D+G Sbjct: 1 MPIRILPSDLSSQISAGEIIERPASVVKEIIENSIDAGSKNINIIVENSGFQSIILKDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ +AV H TSKI+ D + TFGFRGEAL SI AVS LTL+S N+ Sbjct: 61 RGIDKKDLLLAVCHHATSKINSLSDLDKLTTFGFRGEALASIRAVSRLTLISCTRFNDVA 120 Query: 119 AQIAIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 A+I + K ++P+A GT + V +LF+ IP RL FLK++++E + I +V++++A Sbjct: 121 AKIYLEGFCSKNIILQPIAHPEGTTIIVDNLFYNIPVRLKFLKNKKLEFSKICEVVKKIA 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 +++ ++F+ + N + N R+ + + +E+ EK + L G+ Sbjct: 181 LSHFYINFSLKHNNKLITQYNSINNRKNKINRLKDIFDTLDTSEFLEIKEKKYSMVLFGW 240 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P + N Y ++N R + + ++ +R AY++ I + VL L I+ +D Sbjct: 241 ISHPYNFKKIKNIQYCYVNNRYLYNNIFVNAVRAAYSK-IEQKKNISFVLYLTIESFNID 299 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 +N+HP K+ I+F NP ++ FI +++ + K S K + +++ + + Sbjct: 300 INIHPTKNEIKFHNPDVVYTFIYEAVFSYLKKIKEKYYFNFSCKKQTQLNKEK--EFYFY 357 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 + +F ++ ++ N + + P+E+ E+ +G IH+ Sbjct: 358 DSDPTFLTLISSIFFKKKQIFKNIKNKIKHNNFISKSTPLEKYES---SIGRLLIIIHKY 414 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y + + +++ A + +K++ + I + L+ I+L E ++ Sbjct: 415 YGLIYHDNNFLLLSFPVAKGIVRKQKLKNNIQKENI-IEYFLSNIKINLTSQEYLILFNK 473 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 E L + G F + + IPA L K N ++ + + Sbjct: 474 KEILSKFGFHL-IFKKKYVILSSIPAFLKKCNFHIIISNFFAFL 516 >gi|168211841|ref|ZP_02637466.1| DNA mismatch repair protein MutL [Clostridium perfringens B str. ATCC 3626] gi|170710219|gb|EDT22401.1| DNA mismatch repair protein MutL [Clostridium perfringens B str. ATCC 3626] Length = 675 Score = 329 bits (844), Expect = 8e-88, Method: Composition-based stats. Identities = 135/485 (27%), Positives = 233/485 (48%), Gaps = 15/485 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L+ N+IAAGE++ERPS +KEL+ENSLDA + + I GG+S +I D+G Sbjct: 3 RINILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ A H TSKI D D +I+T GFRGEALPSI +++ + S+ + G Sbjct: 63 GVHPEDVEKAFNPHATSKIKDTYDIFSINTLGFRGEALPSIASIARVDFKSKVSDFDMGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ISG + S+ +MN GT +EVRDLFF +PAR FLK+ E+ LI D++ R+++A Sbjct: 123 ELVISGGEKESLTDCSMNIGTQIEVRDLFFNVPARKKFLKTTARESALINDLVNRISLAN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF K+ NG + I + G+ N + E + ++ G+ G Sbjct: 183 PDVSFKLFNNNK---KILNTYGNGKLIDVIRTIYGKSTAENLIYFEEHKDTASVYGFIGN 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 T R + N +F+N R V+++ + + A+ G++P VL ++ P +DVN+ Sbjct: 240 DTLARASRNNQSLFVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNI 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKK--GISTSSVLSKKMISSFHQDNAPKTHLPK 357 HP KS I+F++ I + ++ A+ + T +K + ++ ++ + Sbjct: 300 HPTKSEIKFKDERFIFKVVFDAVHSAMREYVKDTFTLPEEEEKKFEALKEEVIQESLDKE 359 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 + T EKL N + D + +Y+ D ++E ++ +++ Sbjct: 360 IS-----TLEKLKENINYKVSEDRKKEEIYSYNPSKDYEAKTEINIPVDFLSKENQEESF 414 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 I+ + + L + + E ++ D K + ++ EH Sbjct: 415 SINNSFNSL---ENNEFKEVSHKREISYDPILIKNELKDKVSETDSLETSDYKCNKNEHG 471 Query: 478 EDLHR 482 L Sbjct: 472 NSLEE 476 Score = 196 bits (498), Expect = 1e-47, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 127/274 (46%), Gaps = 6/274 (2%) Query: 324 KAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSL---TNTQEKLFLQENRLSTND 380 ++K+ S ++ S + + +H + + N + + + L T+D Sbjct: 403 DFLSKENQEESFSINNSFNSLENNEFKEVSHKREISYDPILIKNELKDKVSETDSLETSD 462 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 + + + + + + Q ++ YI+++ L ++DQHAAHE+++F Sbjct: 463 YKCNKNEHGNSLEETIYKEAKF--PKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILF 520 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI 500 +K D K+ Q L+ P ++ L + E+ E + G K FG N+I I E+ Sbjct: 521 DKYSSDIAKKKVEIQPLMIPLVVTLPTEDYLYYDENKEIFEKAGFKISDFGDNSIRIEEV 580 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 P L K N +L+ +I+ + T T++ + I A+M+C ++++ + +EM L Sbjct: 581 PYFLDKLNPTELITSMINNLKKMGTGETVEVKYNKI-ASMSCRAAVKANDVLSILEMENL 639 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++++ + C HGRPT IK +++K F R Sbjct: 640 IKDLRYINDPFHCPHGRPTIIKFTSYELDKKFKR 673 >gi|229824837|ref|ZP_04450906.1| hypothetical protein GCWU000182_00186 [Abiotrophia defectiva ATCC 49176] gi|229790840|gb|EEP26954.1| hypothetical protein GCWU000182_00186 [Abiotrophia defectiva ATCC 49176] Length = 724 Score = 329 bits (843), Expect = 9e-88, Method: Composition-based stats. Identities = 117/340 (34%), Positives = 187/340 (55%), Gaps = 11/340 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + IN+IAAGE+IE P+ +KEL+EN++DA+++ V I GG S ++TDNG G Sbjct: 4 INLLDKDTINKIAAGEVIEGPAAVVKELVENAIDADANSVTVEIKDGGTSLIRVTDNGKG 63 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + S++I A H TSKI +DD + + GFRGEAL SI AVS + ++++ +G + Sbjct: 64 IGSDDIKTAFLPHATSKIKTADDLVLVSSLGFRGEALASIAAVSEVEVLTKTADEISGIR 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I+G K + P+ GT VR++F+ PAR FLK+ E + +V+ MA+++P Sbjct: 124 YVINGGKEEANEPIGTPEGTTFVVRNIFYNTPARKKFLKTAATEGRYVGEVMEHMAVSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS------NEITLQ 234 +++F F + + NG+ + + + G++ N + +N N ++++ Sbjct: 184 EIAFKFILNGQVKLQTM---GNGSLKDVLFYIYGKETTANIIPVNNPDAEGELVNGLSVR 240 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY G P+ RGN FINGR +++K I I AY + R+P LL+ +D Sbjct: 241 GYIGKPSLTRGNKEYENYFINGRFIKNKVITRAIEDAYKSFLMQHRFPFTCLLISVDSSL 300 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 VDVNVHPAK +RF + + I + A+ KK + Sbjct: 301 VDVNVHPAKLEVRFSDTESLYRLIFHEVDNALRKKDLLPD 340 Score = 193 bits (491), Expect = 6e-47, Method: Composition-based stats. Identities = 76/297 (25%), Positives = 132/297 (44%), Gaps = 3/297 (1%) Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 +V+ ++ N I + +K+ ST KK + H ++ + Sbjct: 429 DVNSSELNKILENKNEISFDNLDEDKKSNAANVNSTFVEDDKKTAGNEHIESVEEEGTAY 488 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 S N +E + ++ + + + +A QI Y Sbjct: 489 KKISDYNEEETAINIKTTTVEPGSETDNELSSEDFKGGILAKKALPDI--KIIGQIFGTY 546 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 I + + ++DQHAAHE++++EK ++ ++ K+TSQ LL P ++ L + ++ E Sbjct: 547 WIMEFDGSVYMIDQHAAHEKVMYEKFVKEISANKVTSQNLLPPVVVTLSGSQRQIVEEIS 606 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 LH+LG + E FG N I+ +P L + ++ DIID+ T D + + L Sbjct: 607 NYLHKLGFEIEPFGGNEYVIKAVPTELFGISEKEMFFDIIDQYSLEGKKAT-PDTVLSKL 665 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ATMAC +I+ + +E+ L+ E+ N C HGRPT I + SD+EK F R Sbjct: 666 ATMACKAAIKGNMNISLLEVKALIEELMSLDNPYNCPHGRPTMIFMSKSDVEKKFKR 722 >gi|210621372|ref|ZP_03292608.1| hypothetical protein CLOHIR_00551 [Clostridium hiranonis DSM 13275] gi|210154796|gb|EEA85802.1| hypothetical protein CLOHIR_00551 [Clostridium hiranonis DSM 13275] Length = 664 Score = 329 bits (843), Expect = 1e-87, Method: Composition-based stats. Identities = 135/403 (33%), Positives = 204/403 (50%), Gaps = 12/403 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L E IN+IAAGE++ERPS +KEL+ENS+DA + R+ + GGKS +ITDNG Sbjct: 4 RINLLDEITINKIAAGEVVERPSSIVKELVENSIDAGADRIIIEVENGGKSLIKITDNGC 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ S E+ RH TSKI DD N+ T GFRGEAL SI AVS L + ++ G Sbjct: 64 GIPSSEVKKCFLRHATSKIDKIDDLFNLFTLGFRGEALASICAVSKLEMTTKFEDEAVGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G I + V N GT + ++DLFF PAR FLK++ E ITD++ ++AI Y Sbjct: 124 KITLVGGNIEAKEAVGANTGTSIVIKDLFFNTPARKKFLKTDHAELMNITDIVNKLAIGY 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + +G + + + N +E+N + + GY G Sbjct: 184 PNVKFRYLNAGKLMVN---TPGDGKLVSAVRSIYSREVSENLIEINYDCSLFKIDGYIGN 240 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R N N +++INGR V+ K I I AY IP+ ++ V + L +DP++VDVN+ Sbjct: 241 NNIYRSNRNLQHIYINGRFVKSKIIYDAIANAYKSIIPINKHAVCFINLHLDPQKVDVNI 300 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS--TSSVLSKKMISSFHQDNAPKTHLPK 357 HP K ++F I+ I++ I+ + K+ + + + QD K + Sbjct: 301 HPGKIEVKFEKENEIKLEIMEYIRAKLLKQSLIGKYETFDRVPKDRAVKQDFIEKNNF-- 358 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 T+ EK N D + + +E N +++ E Sbjct: 359 --TTKQGFIEKTDFNNNTFKNQDFGNASQYS-NEMNSKIDDKE 398 Score = 194 bits (493), Expect = 4e-47, Method: Composition-based stats. Identities = 62/224 (27%), Positives = 110/224 (49%), Gaps = 3/224 (1%) Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 L+ N + E D ++ + + YI+ Q + + ++D Sbjct: 442 LENNNKISETESQMAFTAEGEILDSEKKEAGFSLKYYKVVGVVFDTYIVLQKGESMYLMD 501 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAAHER++FE+ F+ ++ Q LL P +++L + + ++ + G + E F Sbjct: 502 QHAAHERVLFERYMNAFHKREVHMQMLLDPIVLELSSVDMLQVEKNLDIFRNFGFEVEIF 561 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 G N I IR +P + + + ++ID I S Y L+D A MAC +I++ Sbjct: 562 GMNNILIRGVPNLFGTPQSEKFILELIDNIDKISNNYDLKDDR---FAIMACKSAIKAND 618 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++Q+IE+ L +++EK N C HGRPT +++ +IEK+F R Sbjct: 619 RIQNIEIESLFKQLEKCENPYTCPHGRPTMVEISKVEIEKMFKR 662 >gi|295100784|emb|CBK98329.1| DNA mismatch repair protein MutL [Faecalibacterium prausnitzii L2-6] Length = 717 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 116/330 (35%), Positives = 188/330 (56%), Gaps = 5/330 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + IAAGE++ERP+ +KEL+ENS+DA +S++ I GG +I+DNG G Sbjct: 4 IHVLDKHTAELIAAGEVVERPASVVKELLENSIDAGASQITVSIESGGVRLIEISDNGTG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++ IP A RH TSKI DD ++IHT GFRGEAL SI +V+ + +++R + + Sbjct: 64 IEAKYIPTAFIRHATSKIRTEDDLTSIHTLGFRGEALASIASVARVEVLTRTEADECASL 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + + P A GT + V DLFF PAR+ FLK + E + DV+ +A+++P Sbjct: 124 YRIEGGEEQPIEPGARGVGTTIRVYDLFFNTPARMKFLKKDSSEGTFVADVVGHLALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +VSF F +Y +G V+G +F + VE++ + + G P Sbjct: 184 EVSFKFIREGKLQYV---TPGDGQLRSAAYAVLGREFSRDLVEVDNREGVYRVWGLITQP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + Y +INGR V+++ +++ + A+ T+ G++P +LLLE+ VDVNVH Sbjct: 241 RSCRASRSMQYFYINGRYVRNRTMMAGMEMAFKGTMMQGKFPGGILLLEMPADLVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 PAK+ +RF I + + +++ A+++ G Sbjct: 301 PAKTEVRFARENDIFDLVYHAVKLALSQPG 330 Score = 160 bits (406), Expect = 4e-37, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 108/211 (51%), Gaps = 3/211 (1%) Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 SD+P S + + + +I + YI+++ D + I+D+HAAHER +FEK+ Sbjct: 508 SDEPQQSAAPEQLGFDVQDGPEPLRYVGEIFRTYILAERGDEICIIDKHAAHERQLFEKL 567 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + + SQ LL P ++++ E ++ + + L G++ FG +++ +R +PA Sbjct: 568 AAHY--GDVPSQLLLEPLVVEISAEEKTALLTNLDLLESAGLEVSDFGGSSVCLRSVPAD 625 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 + + + LL ++ ++ + L +R E +L +++C +I++G E+ L + Sbjct: 626 VEQGSAEDLLVELAAKLA-HGSRDALNERTEWVLHSISCRAAIKAGDHTSPQELMALAEK 684 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP +KL ++EK FGR Sbjct: 685 ILSGEVPPFCPHGRPCVLKLTRKELEKQFGR 715 >gi|241767114|ref|ZP_04764883.1| DNA mismatch repair protein MutL [Acidovorax delafieldii 2AN] gi|241362303|gb|EER58309.1| DNA mismatch repair protein MutL [Acidovorax delafieldii 2AN] Length = 400 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 117/331 (35%), Positives = 189/331 (57%), Gaps = 11/331 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ ++EL++N+LD+ ++++ + GG + D+G Sbjct: 13 PIRDLPDELISQIAAGEVVERPASVVRELVDNALDSGATQITVRLLAGGVRLIAVEDDGC 72 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+P+A++RH TSKI+ D + T GFRGEAL +IG+VS + L+SRP Sbjct: 73 GIPQEELPIALRRHATSKITSLSDLETVATMGFRGEALAAIGSVSEMALLSRPAHQPGAF 132 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ RP A GT VEV++LFF+ PAR FLK++ E + +RR A+A Sbjct: 133 LLDARSGEL---RPAARGTGTTVEVKELFFSTPARRKFLKTDATELAHCIESVRRHALAR 189 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN------FPERISQVIGEDFINNAVELNEKSNEITL 233 P V F + T G+ R++ V+GEDF+ +V + + +T+ Sbjct: 190 PDVGFAIWHEGKLVEQWRATFTPGDANVQDALARRLADVLGEDFVAQSVAVQHRVGPVTV 249 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G G+P R A+ Y ++NGR V+DK + R+AY + + + P L +EIDP Sbjct: 250 TGRAGLPDAARSRADHQYCYVNGRFVRDKVLTHAARSAYEDVLHGHKQPAYALYVEIDPA 309 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQK 324 +VDVNVHP K +RFR+ + + +++ Sbjct: 310 RVDVNVHPTKIEVRFRDSREVHQAVRHAVEN 340 >gi|187779608|ref|ZP_02996081.1| hypothetical protein CLOSPO_03204 [Clostridium sporogenes ATCC 15579] gi|187773233|gb|EDU37035.1| hypothetical protein CLOSPO_03204 [Clostridium sporogenes ATCC 15579] Length = 664 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 132/466 (28%), Positives = 217/466 (46%), Gaps = 19/466 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + N+IAAGE+IERP +KEL+ENS+DA + + I GG+ +I D+G Sbjct: 3 KINLLDLETTNKIAAGEVIERPFSVVKELVENSIDANAKNITIEIEDGGQRLIKIIDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +I A H TSKI+ +D I T GFRGEAL SI +VS L SR N G Sbjct: 63 GIYPIDIKNAFLPHATSKINSIEDIYKISTMGFRGEALASISSVSKTKLKSRVASYNFGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G KI ++ N GT +EV DLF+ +PARL FLKS + ++ I+D++ R +A+ Sbjct: 123 EIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKFLKSTRSDSTAISDIVNRFILAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF K GN + I V + N + + I++ G+ G Sbjct: 183 PDISFNLINKGKQSIK---SYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R + +F+N R V+ KFI + + A+ + + YP V+ ++I P +DVNV Sbjct: 240 PEISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP KS ++F++ + I ++ +AI ++ + + K +D Sbjct: 300 HPTKSEVKFKDERAMFKAIFDAVHEAIKEELKESFTNFFNK------EDINIYDSEKSMG 353 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 ++ +E++ + + + N + + S E G +I+ N I Sbjct: 354 ETIKTEKEEVQIPIDLNNNNKIHIFGNNINSSTKTNNIEPAKDENIEGKNIFEINNNSSI 413 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 S+ + + E + + N + +S+ Sbjct: 414 SKQDEVYYN--------KNNTEYLNSNNNKEESSSKQDNKNPNTLY 451 Score = 203 bits (516), Expect = 7e-50, Method: Composition-based stats. Identities = 72/234 (30%), Positives = 119/234 (50%), Gaps = 1/234 (0%) Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 + N +E+ +++ + N L +++ T S + E + Y Q + YI+ Sbjct: 430 NSNNNKEESSSKQDNKNPNTLYINENDTTSSSINIKENNPTNFYIDMKIIGQFNNTYILI 489 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 + L I+DQHAAHE+++FEK + + + SQ LL+P +I+L E E + E+ Sbjct: 490 EKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKYIF 549 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 G E FG I I+E+P IL K N+ L DI+ + + + T + I AT+ Sbjct: 550 KNSGFSVEAFGEYTINIKEVPLILGKPNVENLFMDILYNLKNMKSKETSTIKYNAI-ATL 608 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC ++++ ++ E+ +L+ +M N C HGRPT IK L D+EK F R Sbjct: 609 ACKSAVKANDTLKEEEIKKLIEDMLILDNPYTCPHGRPTMIKFTLKDLEKKFKR 662 >gi|148270035|ref|YP_001244495.1| DNA mismatch repair protein MutL [Thermotoga petrophila RKU-1] gi|147735579|gb|ABQ46919.1| DNA mismatch repair protein MutL [Thermotoga petrophila RKU-1] Length = 516 Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats. Identities = 153/595 (25%), Positives = 262/595 (44%), Gaps = 88/595 (14%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++L E +I +IAAGE+I PS +KEL+ENSLDA+++R+ I GGK+ +++DNG Sbjct: 8 RIKRLPESLIRKIAAGEVIHNPSFVLKELVENSLDAQATRIVVEIENGGKNMVRVSDNGI 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT EE +A++ + TSKI +D I T+GFRGEAL SI VS ++++ ++ Sbjct: 68 GMTREEALLAIEPYTTSKIENEEDLQRIRTYGFRGEALASIVQVSRTRIVTKTEKDALAT 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ I+G K+ + + GT VEVRDLFF +P R LKS +E + ++ R +A Sbjct: 128 QLVIAGGKVEEISETHRDIGTTVEVRDLFFNLPVRRKSLKSSAIELRMCREMFERFVLAR 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V F F++ ++ N ER + +I ED + E+ + + + G Sbjct: 188 NDVDFVFASDGKI---VHSFPKTQNIFER-ALLILEDLRKGYITFEEELSGLRINGIVSS 243 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + Y ++NGR V + + Y +P YP+V+L +E V Sbjct: 244 REVTRSSRTGEYFYVNGRFVVSDELHEVLMKVYD--LPKRSYPIVILFIE---------V 292 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 +P + + I+ F+ +++ K+ Sbjct: 293 NPEELDVNIHPSKIVVKFL---------------------------NEEKVKKSLEEVLK 325 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 +L + E +S+ L ++ P+Y + Y + Sbjct: 326 KNLARKWYRSVTYE-EISSRALSVAEAPSYR-------------------WFLVKGKYAV 365 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + DGL+ VD HA HER I+E++ + K + +T L E + Sbjct: 366 VEVEDGLLFVDLHALHERTIYEEILSKKSWGKRPVKKNIT----------VVLSREEKQK 415 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L G + A+ + EIP L++ + + RD ++ ++++ +A Sbjct: 416 LEEYGFSFQGE-EGALKVIEIPEFLTEDVVEEFFRDF-----------SVDEKLKERIAL 463 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC + +SG ++LL K +C HGRP K+ D+++ F R Sbjct: 464 AACKLATKSGEF-DEETTSKLLDVFFK-KRFERCPHGRPISFKISYEDMDRFFER 516 >gi|291530259|emb|CBK95844.1| DNA mismatch repair protein MutL [Eubacterium siraeum 70/3] Length = 677 Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats. Identities = 114/329 (34%), Positives = 181/329 (55%), Gaps = 6/329 (1%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M IR L + + IAAGE+IERPS IKEL+ENS+DA + + I GG S+ +ITD+ Sbjct: 1 MPEIRLLDKSVAELIAAGEVIERPSSVIKELVENSIDAGARHITVEIKHGGISYMRITDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +++P A RH TSKI DD + I T GFRGEAL S+ AV+ + +MSR + Sbjct: 61 GCGIAYDQMPTAFLRHATSKIRTGDDLTGIMTMGFRGEALASVAAVAKIEMMSRQDGDEL 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G + GT + +++LF+ PARL FLK + E N I + R+A+ Sbjct: 121 GGRYIIEGGEEKEHESCGCPTGTTIVIKELFYNTPARLKFLKKDISEGNFIAATVDRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P +SF F + S +G+ V G F ++ + ++ N I + GY Sbjct: 181 SHPDISFRFIRDNK---SVRMTSGDGSLLSAAKAVFGRQFADSLIPVDFSLNGIDVSGYV 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F R + + F+N R ++ ++ + AY ++ +G++P +L + + P VDV Sbjct: 238 SSPLFCRNSRSMQTFFVNTRYIKSTTCMAALEEAYRNSMMVGKFPACILNISLSPETVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHPAK+ IRF + + + +++ A+ Sbjct: 298 NVHPAKTEIRFAYEKPVFDAVYFAVKNAL 326 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 109/250 (43%), Gaps = 8/250 (3%) Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE---SEATHY 404 + H+P Y ++ + + + + + E Sbjct: 432 PLPKEPHIPSYKAVSSSVVVTVDDDTDDIPVTAPQTDEGFRFINAKPVTVERIDEPKPEK 491 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 + + YI+ + + L+I+D+HAAHER+ FEK++++F + TSQ L+ + Sbjct: 492 TSVRVIGEFLKTYILCEAGEELIIIDKHAAHERIRFEKLKEEFVT---TSQLLIDKTELK 548 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L E + E+ E + + GI+ + + I +P+++ K + +++ D+ +++++ Sbjct: 549 LSPEEYEALHEYYEYVEQSGIELVFCDDSTVQITAMPSVV-KCSPQEIVSDVAQRLMNTA 607 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 T +++L TMAC +I++ +E+ L + + C HGRP L Sbjct: 608 TDQK-GALFDDMLHTMACKSAIKAHDDTDILELQALADRVMNDRTIRFCPHGRPVMTSLS 666 Query: 585 LSDIEKLFGR 594 IE+ F R Sbjct: 667 KYRIERFFNR 676 >gi|225165694|ref|ZP_03727494.1| DNA mismatch repair protein MutL [Opitutaceae bacterium TAV2] gi|224800058|gb|EEG18487.1| DNA mismatch repair protein MutL [Opitutaceae bacterium TAV2] Length = 349 Score = 327 bits (839), Expect = 3e-87, Method: Composition-based stats. Identities = 129/336 (38%), Positives = 206/336 (61%), Gaps = 6/336 (1%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 MK +R+L++++ NQIAAGE+IERP+ IKEL+ENSLDA ++R+E A GG+S +I DN Sbjct: 1 MKHVRRLTDRVANQIAAGEVIERPAAVIKELMENSLDAGATRIEVEFAHGGRSLMRIEDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM ++ +A++RH TSKI +DD +++ +FGFRGEALPSI +VS TL +RP +++ Sbjct: 61 GHGMLRDDAVLAIERHATSKINEADDLNSLGSFGFRGEALPSIASVSKFTLQTRPAGSDS 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G ++ I+G K+ VR GT +EV LF ++PAR FLK++ E+ I +R A+ Sbjct: 121 GTEVHINGGKLVHVRDCGRAVGTRIEVAQLFNSVPARRKFLKTDATESAHIISCVRLYAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A+P VSFT ++ +R++++ G + + ++ + + L+G Sbjct: 181 AFPSVSFTLIEDGRTIFRSPECPA---LVDRVAEIFGGQLASTLIPIDAHDDGMELRGLI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R ++ F+N R V ++ + + +Y + +P GRYP L ++IDP QVDV Sbjct: 238 ARPGPGRATRHEMITFVNQRPVDNRTLTYALIESYHDMMPKGRYPAAFLFIDIDPAQVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 NVHPAK +RFR+ +R F+I+S+ + + + G Sbjct: 298 NVHPAKREVRFRSEPQVRGFVIRSVLQTLRELGPLP 333 >gi|237795208|ref|YP_002862760.1| DNA mismatch repair protein [Clostridium botulinum Ba4 str. 657] gi|259509929|sp|C3KX34|MUTL_CLOB6 RecName: Full=DNA mismatch repair protein mutL gi|229264105|gb|ACQ55138.1| DNA mismatch repair protein [Clostridium botulinum Ba4 str. 657] Length = 666 Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats. Identities = 119/341 (34%), Positives = 183/341 (53%), Gaps = 5/341 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + N+IAAGE+IERP +KEL+ENS+DA + + I GG+ +I D+G Sbjct: 3 KINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +I A H TSKI+ +D I T GFRGEAL SI +VS L SR N G Sbjct: 63 GIYPIDIKNAFLPHATSKINSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNFGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G KI ++ N GT +EV DLF+ +PARL FLKS + +++ I+D++ R +A+ Sbjct: 123 EIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKFLKSARSDSSAISDIVNRFILAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF K GN + I V + N + + I++ G+ G Sbjct: 183 PDISFNLINKGKQSIK---SYGTGNLKDSIRCVYNKTISENLINFENHKDIISVYGFIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R + +F+N R V+ KFI + + A+ + + YP V+ ++I P +DVNV Sbjct: 240 PEISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK 340 HP KS ++F++ + I ++ +AI + + + K Sbjct: 300 HPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFTNFFNK 340 Score = 200 bits (509), Expect = 5e-49, Method: Composition-based stats. Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 1/224 (0%) Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 LQ++ + ++L ++ T S + E Y Q + YI+ + L I+D Sbjct: 442 LQKDNKNLDNLYLNEHNTNSSSINIKENKPNNFYVDMKIIGQFNNTYILIEKDKELYIID 501 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAAHE+++FEK + + + SQ LL+P +I+L E E + E+ + G E F Sbjct: 502 QHAAHEKVLFEKFKSEIEKGYVVSQILLSPVVIELSEDEFNIYEENKDIFKNSGFSVEAF 561 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 G I I+E+P IL K N+ L DI+ + + + T + I AT+AC ++++ Sbjct: 562 GECTINIKEVPLILGKPNVENLFMDILYNLKNMKSKETSTIKYNAI-ATLACKSAVKAND 620 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ E+ +L+ +M N C HGRPT IK L D+EK F R Sbjct: 621 NLKEEEIKKLIEDMLILNNPYTCPHGRPTMIKFTLKDLEKKFKR 664 >gi|332526665|ref|ZP_08402767.1| DNA mismatch repair protein MutL [Rubrivivax benzoatilyticus JA2] gi|332111068|gb|EGJ11100.1| DNA mismatch repair protein MutL [Rubrivivax benzoatilyticus JA2] Length = 361 Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats. Identities = 117/362 (32%), Positives = 188/362 (51%), Gaps = 11/362 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR+L +++++QIAAGE++ERP+ ++EL++N+LDA + + +A GG + D+G Sbjct: 9 PIRELPDELVSQIAAGEVVERPASVVRELVDNALDAGARAIVVRLAAGGVRSIVVEDDGC 68 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+P+A++RH TSKI + ++ T GFRGEAL +I +VS + + SR G Sbjct: 69 GIPMEELPLALKRHATSKIGSLGELESVRTMGFRGEALAAIASVSEMAITSRSADAAHGW 128 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ++ +P A GT VEV +LFF+ PAR FLKSE E D +RR A+A Sbjct: 129 RVDARSGEL---QPAARAQGTTVEVHELFFSTPARRKFLKSEATELAHALDAVRRHALAR 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + +R+ V+G DFI + L + + L G G Sbjct: 186 PDVGFAVWHEGRAVAQWRAAGA----EQRLGDVLGRDFITASRPLEAAAGPLQLWGRAGQ 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + Y+F+NGR V+D+ + +R AY + + + P L L+I+P VDVNV Sbjct: 242 PEAARSRTDLQYLFVNGRYVRDRLVSHAVRAAYEDQLHGSKQPAYALFLQIEPELVDVNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RFR+ + + +++ + G ++V + + T A Sbjct: 302 HPTKIEVRFRDGRAVHQAVQRALVDTLA--GTRAAAVPEPSPEPAAAGPDIADTPAAAVA 359 Query: 360 TS 361 Sbjct: 360 PP 361 >gi|289450496|ref|YP_003475197.1| DNA mismatch repair protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185043|gb|ADC91468.1| DNA mismatch repair protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 677 Score = 327 bits (837), Expect = 4e-87, Method: Composition-based stats. Identities = 131/390 (33%), Positives = 199/390 (51%), Gaps = 9/390 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L + N IAAGE++ERP+ +KEL EN+LDA + ++ I GG S+ Q+ D+G Sbjct: 3 KIKVLDVQTANSIAAGEVVERPASVVKELCENALDAGAGNIKITIKNGGNSYLQVLDDGC 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT E+ +A H TSK+S D N+ T GFRGEAL SI AV+ + L++R + Sbjct: 63 GMTGEDAKLAFLPHATSKLSVISDLDNLDTMGFRGEALASIAAVAKVNLITRTADAPSAV 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K S + PV GT + V DLFF PAR FLK + E N I D+++++A+A Sbjct: 123 TLQVDGGKWSEITPVGAPIGTCITVEDLFFNTPARFKFLKKDSTELNKIIDIVQKLALAR 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE----KSNEITLQG 235 P VSF ST + + N + P + + G+ + + L E ++ + + G Sbjct: 183 PDVSFLLSTPERI---LLHTPGNNDLPSVVFSLFGKQTASELIALPELDMADNSPVKVSG 239 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 G P R + VF+N R V D + I AY + + G+YPVV++ L + P V Sbjct: 240 LIGQPGAARSSRASQLVFVNNRPVHDIAVTKAIDEAYRDRLMKGKYPVVIIKLNLPPYLV 299 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 D+NVHP KS +RF N + N + +I+ A+ + + + S ++N T L Sbjct: 300 DINVHPQKSEVRFWNSGTVFNSVYHTIKSALAEDVLPPGDWSDRTKPESAGKENRGGTTL 359 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 P S + N+ N L Sbjct: 360 PDSIDSCVAQRPAANYPVNKSFENVALNEP 389 Score = 173 bits (438), Expect = 8e-41, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 4/188 (2%) Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q+ YII + L +VDQHAAHE+++FE+ Q N ++ L P I L + Sbjct: 489 VGQVFNTYIILADHEELWLVDQHAAHEKVLFERFMQQLNEREL-RLQTLIPVPIRLNLDD 547 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 + + DL LG + + F ++ +R +PA L N + ++D + D Sbjct: 548 KRMALNFRNDLADLGYEFDEFDGESLILRTVPACLLTNNPTEAFEAVLDYLRDEVKPNDK 607 Query: 530 QDRIENI---LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 + +AT+AC +I+ + E+ LL+E+ C HGRP I+L Sbjct: 608 TWPEHQLYGFIATVACKAAIKGNDPLTEDEIKTLLQELAALKQPYNCPHGRPVIIRLSKQ 667 Query: 587 DIEKLFGR 594 ++EK F R Sbjct: 668 ELEKRFKR 675 >gi|295105665|emb|CBL03209.1| DNA mismatch repair protein MutL [Faecalibacterium prausnitzii SL3/3] Length = 713 Score = 327 bits (837), Expect = 5e-87, Method: Composition-based stats. Identities = 120/370 (32%), Positives = 191/370 (51%), Gaps = 12/370 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + IAAGE++ERP+ +KEL+ENS+DA +++V I GG +I+DNG G Sbjct: 4 IHVLDKHTAELIAAGEVVERPASVVKELLENSIDAGATQVTVSIESGGVKLIEISDNGTG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E IP A RH TSKI DD ++IHT GFRGEAL SI +V+ + L++R + Sbjct: 64 IDAEYIPTAFIRHATSKIEKPDDLNSIHTLGFRGEALASIASVARVELLTRTEVDEFATC 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ISG + P A GT + V+DLF+ PAR+ FLK + E + D + +A+++P Sbjct: 124 YRISGGEEQGREPAARAVGTTIRVQDLFYNTPARMKFLKKDSSEGTFVADNVGHVALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +VS F +Y +G V+G +F + +E++ + + G P Sbjct: 184 EVSVKFIREGKLQYV---TPGDGQLRSAAYAVLGREFSRDLIEVHFEEGLYRVTGLITPP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + + +INGR V+++ I++ + A+ T G++P +LLLE+ VDVNVH Sbjct: 241 KSCRASRSMQHFYINGRYVRNRTIMAGMEMAFKGTTMQGKFPGGILLLEMPTDLVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK RF + + + +++ A+ + G + +F D KT Sbjct: 301 PAKIEARFARENDVFDVVYHAVKLALAQPGT-------GERRFTFEADEKEKTEKENDTQ 353 Query: 361 SLTNTQEKLF 370 S + F Sbjct: 354 SENAVKNNHF 363 Score = 167 bits (424), Expect = 4e-39, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 124/285 (43%), Gaps = 4/285 (1%) Query: 311 PTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT-SLTNTQEKL 369 I+ + + + + T+ + + D P+T + Sbjct: 430 EDILDPVVTLHSPEKADATKVQTAPQPFRAAAAETQLDVRPETDAAADPPLDHMAAWNTV 489 Query: 370 FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + ++P SE + + + ++ + YI+++ D L ++ Sbjct: 490 PAAPEIEAATVPYQPEEPVQSEQPEQLGFDVPQGEEPLRYVGEVFRTYILAERGDELCLI 549 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 D+HAAHER ++EK+ ++ + + SQ LL P IDL E ++E+ L G+ Sbjct: 550 DKHAAHERQLYEKLAANYGN--VPSQLLLQPAAIDLSAEEKQALLENQPLLENAGLDVAD 607 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 FG + + +R +PA + +N LL +I D ++ + L + E +L +++C +I++G Sbjct: 608 FGGSTVLLRAVPADVEPQNAEDLLVEIADRLL-KGSRDALNEHTEWVLHSISCRAAIKAG 666 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 K E+ L ++ C HGRP +KL ++EK FGR Sbjct: 667 DKSSPQELMALAEKILSGEVPPFCPHGRPCVLKLTRKELEKQFGR 711 >gi|227872343|ref|ZP_03990696.1| possible DNA mismatch repair protein MutL [Oribacterium sinus F0268] gi|227841807|gb|EEJ52084.1| possible DNA mismatch repair protein MutL [Oribacterium sinus F0268] Length = 712 Score = 326 bits (836), Expect = 6e-87, Method: Composition-based stats. Identities = 126/407 (30%), Positives = 212/407 (52%), Gaps = 16/407 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI LS++ INQIAAGE++ERPS +KEL+EN+LDA+++ + I GGG SF +++DNG Sbjct: 1 MKIHLLSQECINQIAAGEVVERPSSIVKELVENALDAKATAISIEIKGGGISFLRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ SE++ A H TSKI + D I +FGFRGEAL SI +V+ + +S+ ++ Sbjct: 61 EGIFSEDLERAFMPHATSKIQNPKDLEEILSFGFRGEALASIASVAKVECISKRQEDFLA 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I + G S + V GT + VRDLF+ +PAR FL SE E + + +++ ++A+A Sbjct: 121 HRILVEGGSFSPIEEVGGMDGTSILVRDLFYNVPARKKFLLSESTEASRVEEMVEKLALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE-------- 230 P +SF F +R++ G + + + G+ F +++E+ E Sbjct: 181 NPGISFHFVKDGKSRFQTL---GGGKLSDVVFGIYGKSFAKDSLEIRESYYPSSLTGLAT 237 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 + ++G G P+ R N F+NGR V+D + + AY + ++P ++ L + Sbjct: 238 LHIEGLLGKPSLTRSNRQYEIFFVNGRFVRDSLLSRALEDAYKPFLMQHKFPFAIVFLHL 297 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---KGISTSSVLSKKMISSFHQ 347 P VDVNVHP K +RF+N I + + K ++K S S+ K+ Sbjct: 298 SPSLVDVNVHPQKLEVRFQNREKIYQALFDCVSKTLSKADLIDHSPLSLFQKEKEEKSTA 357 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 +P + L + + + + R ND ++ + ++ + Sbjct: 358 FLSPSSQLWEKKEEKKENKNDIPEEAVRSDQNDKQSAEQISTIKEQE 404 Score = 183 bits (464), Expect = 9e-44, Method: Composition-based stats. Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 5/235 (2%) Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 ++ + + +E S ++ LPS + E + Q+ Q Y + Sbjct: 481 NTVPKEENTVPKEEQLFSESEDLPSAEQESLFSPSFFSEEGEREF---RLIGQVFQTYWL 537 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + L I+DQHAAHE++ FEKMR+++ SQ +L + E L + + Sbjct: 538 IEFQKELFIMDQHAAHEKVNFEKMRKNYLKKPGISQGILPK-TMVFSAKEEELYEKTKDY 596 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 LG + + A+ IPA + L +I+D + + + + I A+ Sbjct: 597 FTHLGYRIRKEEEKRYALEGIPADFPSLDAEMLFHEILDALAEEGNLSEAESVYDKI-AS 655 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MAC S++ + + E L++++ N C HGRPT + K D+EK+F R Sbjct: 656 MACKASVKGNQLLSFKEAEALVQKLFTLENPYACPHGRPTIVAFKKQDLEKMFKR 710 >gi|303326191|ref|ZP_07356634.1| DNA mismatch repair protein MutL [Desulfovibrio sp. 3_1_syn3] gi|302864107|gb|EFL87038.1| DNA mismatch repair protein MutL [Desulfovibrio sp. 3_1_syn3] Length = 675 Score = 326 bits (835), Expect = 8e-87, Method: Composition-based stats. Identities = 124/446 (27%), Positives = 216/446 (48%), Gaps = 14/446 (3%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M+ IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ + GG++ ++ D+ Sbjct: 5 MRHIRLLPPELRNQIAAGEVVERPASVLKELVENSLDAGAARIDVRLDNGGQALIRVQDD 64 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSR---PPQ 114 G G+ ++E+ ++V RH TSKI+ DD I ++GFRGEALPSI +VS ++S P Sbjct: 65 GCGIPADELELSVTRHATSKIASMDDLERIRSYGFRGEALPSIASVSRFRIVSAWQGPDN 124 Query: 115 NNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRR 174 + + + ++ + P A++ GTIVEVRDLF IPARL FLK+ E D + R Sbjct: 125 QSAAHCVEVEHGRLLASSPAALHKGTIVEVRDLFSNIPARLKFLKTPATEFKRAQDWLAR 184 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 +A+A +V F+ + +R++ + + + + I + Sbjct: 185 LALARAEVGFSLHSGDREALHFL---PGQTLRDRLALLWPRLIVEALRPFEGERHGIRVH 241 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G +PT ++ ++ +F+N R+V DK +L+ +R AY + YP V L +++DP + Sbjct: 242 GLAALPTVSQPRGDRILLFVNNRSVLDKRLLAAVREAYKGRLTSRDYPQVALFVDMDPCE 301 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS-----TSSVLSKKMISSFHQDN 349 VDVNVHPAKS +RFR+ + + + + ++Q A+ + + + + Sbjct: 302 VDVNVHPAKSEVRFRDESAVFSACLHAVQGALVTSFTAALEGEAPDAAAPDLFTEGPSSG 361 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 P P L + V ++ +++ + Sbjct: 362 QPGGLFPARENPAGTASASEAAAPRPQGFWGRLDDPPLLARPETSSVPDAPEEDWRVSVP 421 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAH 435 + I + + A H Sbjct: 422 PGRSAAPRIFAPVEEDAAPYGPPAEH 447 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 61/299 (20%), Positives = 112/299 (37%), Gaps = 17/299 (5%) Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ-DNAPKTHLPKYA 359 P + R +P ++ S+ A + + F + + P Sbjct: 387 PQGFWGRLDDPPLLARPETSSVPDAPEEDWRVSVPPGRSAAPRIFAPVEEDAAPYGPPAE 446 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES---EATHYQLGIACAQIHQN 416 S + + L+P E E Q+ Sbjct: 447 HSFPPECAGASASMPDAAWSGLVPEPAVASDASFAAAPEPREREPLRVGPLSYLGQVADT 506 Query: 417 YIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 Y+I + +G L+++DQHAAHER+++ ++R+ + L P + L E + Sbjct: 507 YLILRDAEGALLLLDQHAAHERVLYTRLRRGGFAGTGQCLAL--PLELGLHPAELERFQQ 564 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 E L LG E + +R +P +LS+ LR+ + +D + Sbjct: 565 LRERLESLGFALE-CADGTLLVRAMPPVLSRAEARDFLREALS---------GRKDDLAG 614 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +M+C G+I++G+++ E LLR+ P C HGRP ++ + +EK F R Sbjct: 615 MFISMSCKGAIKAGQRLTDDEAAGLLRQWLAVPEREYCPHGRPCVLRWDAAALEKFFKR 673 >gi|58697014|ref|ZP_00372486.1| DNA mismatch repair protein MutL-1 [Wolbachia endosymbiont of Drosophila simulans] gi|58536731|gb|EAL59997.1| DNA mismatch repair protein MutL-1 [Wolbachia endosymbiont of Drosophila simulans] Length = 406 Score = 326 bits (835), Expect = 8e-87, Method: Composition-based stats. Identities = 145/404 (35%), Positives = 222/404 (54%), Gaps = 6/404 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L K IN+IAAGE+IERP+ +KEL+EN++DA S +E I GG++ +TD+G Sbjct: 1 MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSLEIEIKIESGGRNLIIVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ +A RH TSK+SD + I GFRGEALPSI AVS + L S+ + + Sbjct: 61 NGVEKNDLELAFMRHATSKLSDSELIEIKHLGFRGEALPSIAAVSRIKLSSKAREASEAW 120 Query: 120 QIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I+ GEKI P +++ GT +EVRDLFF P RL FLK+E+ ET I D++ +A+ Sbjct: 121 SISYEGGEKIGEQTPYSLSQGTHIEVRDLFFATPNRLKFLKTERAETQSIVDIVNNLAMI 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + FT ++ K+ + + R+ +V E+F +++E+NE+ + I L G+ Sbjct: 181 NYHIGFTLTSGNK---KLLKYAKQTSLFHRLCEV-EEEFQGSSLEINEEEDGIKLTGHIC 236 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 PT NRG + Q Y F+NGR ++D ++ +R AY + IP RYP L LEI QVDVN Sbjct: 237 KPTVNRGKSTQIYTFVNGRPIKDNLLIGAVRYAYHDFIPSDRYPFAALHLEIPYDQVDVN 296 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP KS +RF+N +I + + + KA++++ + + K + + P + Sbjct: 297 VHPNKSEVRFQNKKLIYEIMTRGLIKALSRRIGTFPAHDQKMDSTLPDPFDKPDVQNERR 356 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 + N K F N + S Y+ ++EA Sbjct: 357 PSPFENQLIKEFASPNEKAKGLSEQSKSFDYTGIQKFPAQAEAM 400 >gi|289580965|ref|YP_003479431.1| DNA mismatch repair protein MutL [Natrialba magadii ATCC 43099] gi|289530518|gb|ADD04869.1| DNA mismatch repair protein MutL [Natrialba magadii ATCC 43099] Length = 765 Score = 326 bits (835), Expect = 8e-87, Method: Composition-based stats. Identities = 124/390 (31%), Positives = 194/390 (49%), Gaps = 14/390 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + +IAAGE++ERP+ A+KEL+ENSLDA +S ++ + GG ++ D+G G Sbjct: 13 IHQLDEDTVARIAAGEVVERPASAVKELVENSLDAGASSIDVTVEAGGTDLVRVADDGHG 72 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQ-NNTG 118 MT ++ AV++H TSKIS DD + + T GFRGEAL +IG+VS LT+ SRP + G Sbjct: 73 MTEADLRAAVRQHTTSKISGLDDLESGVATLGFRGEALHTIGSVSRLTIQSRPQDGDGAG 132 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ G + SV P GT VEV DLF+ PAR FLK+ E + V+ R A+A Sbjct: 133 TELVYEGGTVESVSPTGCPAGTTVEVADLFYNTPARRKFLKTTATEFAHVNRVVTRYALA 192 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT------ 232 P+V+ + + + + G+ + V G + + + ++ E+ Sbjct: 193 NPEVAVSLTHDGREVF---STTGQGDLQAAVLAVYGREVASAMIPVDADGEELPPGPLES 249 Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 + G P NR + ++N R V + I AY + RYP VVL E+ Sbjct: 250 VAGLVSHPETNRASREYLATYVNDRAVTSDALREGIMGAYGTQLGGDRYPFVVLFHEVPG 309 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK 352 VDVNVHP K +RF + +R + +++ A+ + G+ S + Q + Sbjct: 310 DAVDVNVHPRKREVRFDDDDAVRRQVDSAVESALLEHGLLRSRAPRGRSAPGEAQVTPTQ 369 Query: 353 THLPKYATSLTNTQ-EKLFLQENRLSTNDL 381 L + + + T T + E S D Sbjct: 370 EELAERSGAGTETSAAEPSAAEPSTSEGDA 399 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 100/265 (37%), Gaps = 4/265 (1%) Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 + + PK + A S T ++ + Sbjct: 495 PDPDTDTETNTDTDSAPDPKPNPESAAASSMETPGATETKDGNSKFDATTEQRTLAGDAA 554 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + E Q+ Y++ +T DGL ++DQHAA ER+ +E++R F+ Sbjct: 555 TGGDYDHEFDSLPPLRVLGQLSDTYLVCETDDGLALIDQHAADERVNYERLRTAFDEDSS 614 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 ++L E + + L +LG A+R +A+ +PA+ K P+ Sbjct: 615 AQALASP-VELELTAAEAEAFAAYRDALAQLGFYADRVDDRTVAVTTVPAVFEKTLDPEQ 673 Query: 513 LRDIIDEIIDSS---TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 LRD++ ++ T+ + + +ACY SI + + LL ++ N Sbjct: 674 LRDVLVSFVEGDREAGAETVDALADEFIGDLACYPSITGNTSLTEGSVVDLLAALDDCEN 733 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP ++ ++IE F R Sbjct: 734 PYACPHGRPVVVQFDEAEIEDRFER 758 >gi|15835478|ref|NP_297237.1| DNA mismatch repair protein [Chlamydia muridarum Nigg] gi|270285658|ref|ZP_06195052.1| DNA mismatch repair protein [Chlamydia muridarum Nigg] gi|270289667|ref|ZP_06195969.1| DNA mismatch repair protein [Chlamydia muridarum Weiss] gi|301337054|ref|ZP_07225256.1| DNA mismatch repair protein [Chlamydia muridarum MopnTet14] gi|14194944|sp|Q9PJG5|MUTL_CHLMU RecName: Full=DNA mismatch repair protein mutL gi|7190890|gb|AAF39660.1| DNA mismatch repair protein MutL [Chlamydia muridarum Nigg] Length = 576 Score = 326 bits (835), Expect = 9e-87, Method: Composition-based stats. Identities = 138/520 (26%), Positives = 250/520 (48%), Gaps = 14/520 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L +NQIAAGE+IE + +KELIEN+LDA + + GGGK + DNG Sbjct: 7 RIRLLDSATVNQIAAGEVIENAASVVKELIENALDAGADEISIETLGGGKGQIVVRDNGI 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++E+ +A+QRH TSKIS D ++ +FGFRGEALP+I ++S + + + N G+ Sbjct: 67 GMDADEVAVAIQRHATSKISHFADIFSLASFGFRGEALPAIASISKMEIHT-AKVNGLGS 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I + PGT + V LF+ +P R +F KS Q++ I ++ ++ Sbjct: 126 KTLIEKGEPVCCEACPRQPGTTISVNSLFYNVPMRQSFQKSPQMDRLAIRRLLENSILST 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + +T+ + + + + N F ER++ V+GE F+N A ++++ NE+ L G+ G Sbjct: 186 EGIKWTWISERRQELNI---AKNQGFTERVALVMGEAFVNEAFLIDKRQNELHLTGFLGS 242 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+ +R +FIN R V+ FI + AYA +P RYP VL L + P D NV Sbjct: 243 PSMHRSTRQGQRLFINNRAVESSFISRKVAEAYAWMLPAQRYPAFVLKLSVPPMWCDFNV 302 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K+ +R I ++++I + + + S L +KM+ + + + Sbjct: 303 HPQKTEVRLLQEGQIGALLVEAISEVL----LHRSPSLEEKMVEPTMESPLIENGGLEIP 358 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + N L + + + ++ + + + + ++ I+ Sbjct: 359 SIRPVAISTPLSCPNFLQQSFVETEANRALCKEQENLALPIIERVRFLASLGKV----IL 414 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + ++G+ + AA + L + + + + + Q L P + + + E + E Sbjct: 415 VEDSEGVHALFVQAARKHLFYISLLSKRSDSLLACQMFLVPPTVQMTKLEADFLQTRLES 474 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 L GI+ R P++ AI P + ++ + + + + E Sbjct: 475 LAAQGIELCRISPDSFAIESAPPFIQEEELKEWIISLAHE 514 >gi|15642797|ref|NP_227838.1| DNA mismatch repair protein [Thermotoga maritima MSB8] gi|4980506|gb|AAD35116.1|AE001690_10 DNA mismatch repair protein [Thermotoga maritima MSB8] Length = 516 Score = 325 bits (834), Expect = 1e-86, Method: Composition-based stats. Identities = 149/595 (25%), Positives = 257/595 (43%), Gaps = 88/595 (14%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++L E ++ +IAAGE+I PS +KEL+ENSLDA++ R+ I GGK+ +++DNG Sbjct: 8 RIKRLPESLVRKIAAGEVIHNPSFVLKELVENSLDAQADRIVVEIENGGKNMVRVSDNGI 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT EE +A++ + TSKI +D I T+GFRGEAL SI VS ++++ ++ Sbjct: 68 GMTREEALLAIEPYTTSKIESEEDLHRIRTYGFRGEALASIVQVSRAKIVTKTEKDALAT 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ I+G K+ + + GT VEVRDLFF +P R LKS +E + ++ R + Sbjct: 128 QLMIAGGKVEEISETHRDTGTTVEVRDLFFNLPVRRKSLKSSAIELRMCREMFERFVLVR 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V F F++ ++ N ER + +I ED + E+ + + ++G Sbjct: 188 NDVDFVFTSDGKI---VHSFPRTQNIFER-ALLILEDLRKGYITFEEELSGLRIKGIVSS 243 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + Y ++NGR V + + + Y +P YPV VL +E+ Sbjct: 244 REVTRSSRTGEYFYVNGRFVVSEELHEVLMKVYD--LPKRSYPVAVLFIEV--------- 292 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 +P + + I+ F+ +++ K+ Sbjct: 293 NPEELDVNIHPSKIVVKFL---------------------------NEEKVKKSLEETLK 325 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 +L + E S V E+ + + + Y + Sbjct: 326 RNLARKWYRSVAYEE--------------ISSRALSVAEAPSHRW------FLVKGKYAV 365 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + DGL+ VD HA HER I+E++ + K + +T L E + Sbjct: 366 VEVEDGLLFVDLHALHERTIYEEILSKKSWGKRRVKRNIT----------VVLSREEKQK 415 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L G + A+ + EIP L++ + + RD + ++++ +A Sbjct: 416 LEEYGFSFQGE-EGALKVIEIPEFLTEDVVEEFFRDF-----------PVDEKLKERIAL 463 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC + +SG E+ L ++ +C HGRP K+ D+++ F R Sbjct: 464 AACKLATKSGEF--DEEIASKLLDVFFKKRFERCPHGRPISFKISYEDMDRFFER 516 >gi|167750507|ref|ZP_02422634.1| hypothetical protein EUBSIR_01483 [Eubacterium siraeum DSM 15702] gi|167656433|gb|EDS00563.1| hypothetical protein EUBSIR_01483 [Eubacterium siraeum DSM 15702] Length = 677 Score = 325 bits (834), Expect = 1e-86, Method: Composition-based stats. Identities = 114/329 (34%), Positives = 180/329 (54%), Gaps = 6/329 (1%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M IR L + + IAAGE+IERPS IKEL+ENS+DA + + I GG S+ +ITD+ Sbjct: 1 MPEIRLLDKSVAELIAAGEVIERPSSVIKELVENSIDAGARHITVEIKHGGISYMRITDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++P A RH TSKI DD + I T GFRGEAL S+ AV+ + +MSR + Sbjct: 61 GCGIAYAQMPTAFLRHATSKIRTGDDLTGIMTMGFRGEALASVAAVAKIEMMSRQDGDEL 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G + GT + +++LF+ PARL FLK + E N I + R+A+ Sbjct: 121 GGRYIIEGGEEKEHESCGCPTGTTIVIKELFYNTPARLKFLKKDISEGNFIAATVDRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P +SF F + S +G+ V G F ++ + ++ N I + GY Sbjct: 181 SHPDISFRFIRDNK---SVRMTSGDGSLLSAAKAVSGRQFADSLIPVDFSLNGIDVSGYV 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F R + + F+N R ++ ++ + AY ++ +G++P +L + + P VDV Sbjct: 238 SSPLFCRNSRSMQTFFVNTRYIKSTTCMAALEEAYRNSMMVGKFPACILNISLSPETVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHPAK+ IRF + + + +++ A+ Sbjct: 298 NVHPAKTEIRFAYEKPVFDAVYFAVKNAL 326 Score = 130 bits (328), Expect = 4e-28, Method: Composition-based stats. Identities = 52/250 (20%), Positives = 109/250 (43%), Gaps = 8/250 (3%) Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE---SEATHY 404 + H+P Y ++ + + + + + E Sbjct: 432 PLPKEPHIPSYKAVSSSVVVTVDDDTDDIPVTAPQTDEGFRFINAKPITVERIDEPKPEK 491 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 + + YI+ + + L+I+D+HAAHER+ FEK++++F + TSQ L+ + Sbjct: 492 TSVRVIGEFLKTYILCEADEELIIIDKHAAHERIRFEKLKEEFVT---TSQLLIDKTELK 548 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L E + E+ E + + GI+ + + I +P+++ K + +++ D+ +++++ Sbjct: 549 LSPEEYEALHEYYEYVEQSGIELVFCDDSTVQITAMPSVV-KCSPQEIVSDVAQRLMNTA 607 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 T +++L TMAC +I++ +E+ L + + C HGRP L Sbjct: 608 TDQK-GALFDDMLHTMACKSAIKAHDDTDILELQALADRVMNDRTIRFCPHGRPVMTALS 666 Query: 585 LSDIEKLFGR 594 IE+ F R Sbjct: 667 KYRIERFFNR 676 >gi|160945082|ref|ZP_02092308.1| hypothetical protein FAEPRAM212_02601 [Faecalibacterium prausnitzii M21/2] gi|158442813|gb|EDP19818.1| hypothetical protein FAEPRAM212_02601 [Faecalibacterium prausnitzii M21/2] Length = 713 Score = 325 bits (834), Expect = 1e-86, Method: Composition-based stats. Identities = 113/330 (34%), Positives = 181/330 (54%), Gaps = 5/330 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + IAAGE++ERP+ +KEL+ENS+DA +++V I GG +I+DNG G Sbjct: 4 IHVLDKHTAELIAAGEVVERPASVVKELLENSIDAGATQVTVSIESGGVKLIEISDNGTG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E IP A RH TSKI DD ++IHT GFRGEAL SI +V+ + L++R + Sbjct: 64 IDAEYIPTAFIRHATSKIEKPDDLNSIHTLGFRGEALASIASVARVELLTRTEVDEFATC 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I+G + P A GT + V+DLF+ PAR+ FLK + E + D + +A+++P Sbjct: 124 YRIAGGEEQGREPAARAVGTTIRVQDLFYNTPARMKFLKKDSSEGTFVADNVGHVALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +VS F +Y +G V+G +F + +E+ + + G P Sbjct: 184 EVSVKFIREGKLQYV---TPGDGQLRSAAYAVLGREFSRDLIEVQSEEGLYRVTGLITPP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + + +INGR V+++ I++ + A+ T G++P +LLLE+ VDVNVH Sbjct: 241 KSCRASRSMQHFYINGRYVRNRTIMAGMEMAFKGTTMQGKFPGGILLLEMPTDLVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 PAK RF + + + +++ A+ + G Sbjct: 301 PAKIEARFARENDVFDVVYHAVKLALAQPG 330 Score = 165 bits (418), Expect = 2e-38, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 124/285 (43%), Gaps = 4/285 (1%) Query: 311 PTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH-LPKYATSLTNTQEKL 369 I+ + + + + T+ + + D P+T + Sbjct: 430 EDILDPVVTLHSPEKADATKVQTAPQPFRAAAAETQLDVRPETDATADPLLDHMAAWNTV 489 Query: 370 FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + ++P SE + + + ++ + YI+++ D L ++ Sbjct: 490 PAAPEIEAATVPYQPEEPVQSEQPEQLGFDVPQGEEPLRYVGEVFRTYILAERGDELCLI 549 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 D+HAAHER ++EK+ ++ + + SQ LL P IDL E ++E+ L G+ Sbjct: 550 DKHAAHERQLYEKLAANYGN--VPSQLLLQPAAIDLSAEEKQALLENQPLLENAGLDVAD 607 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSG 549 FG + + +R +PA + +N LL +I D ++ + L + E +L +++C +I++G Sbjct: 608 FGGSTVLLRAVPADVEPQNAEDLLVEIADRLL-KGSRDALNEHTEWVLHSISCRAAIKAG 666 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 K E+ L ++ C HGRP +KL ++EK FGR Sbjct: 667 DKSSPQELMALAEKILSGEVPPFCPHGRPCVLKLTRKELEKQFGR 711 >gi|291557074|emb|CBL34191.1| DNA mismatch repair protein MutL [Eubacterium siraeum V10Sc8a] Length = 677 Score = 325 bits (834), Expect = 1e-86, Method: Composition-based stats. Identities = 114/329 (34%), Positives = 180/329 (54%), Gaps = 6/329 (1%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M IR L + + IAAGE+IERPS IKEL+ENS+DA + + I GG S+ +ITD+ Sbjct: 1 MPEIRLLDKSVAELIAAGEVIERPSSVIKELVENSIDAGARHITVEIKHGGISYMRITDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++P A RH TSKI DD + I T GFRGEAL S+ AV+ + +MSR + Sbjct: 61 GCGIAYAQMPTAFLRHATSKIRTGDDLTGIMTMGFRGEALASVAAVAKIEMMSRQDGDEL 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + I G + GT + +++LF+ PARL FLK + E N I + R+A+ Sbjct: 121 GGRYIIEGGEEKEHESCGCPTGTTIVIKELFYNTPARLKFLKKDISEGNFIAATVDRLAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P +SF F + S +G+ V G F ++ + ++ N I + GY Sbjct: 181 SHPDISFRFIRDNK---SVRMTSGDGSLLSAAKAVSGRQFADSLIPVDFSLNGIDVSGYV 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P F R + + F+N R ++ ++ + AY ++ +G++P +L + + P VDV Sbjct: 238 SSPLFCRNSRSMQTFFVNTRYIKSTTCMAALEEAYRNSMMVGKFPACILNISLSPETVDV 297 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHPAK+ IRF + + + +++ A+ Sbjct: 298 NVHPAKTEIRFAYEKPVFDAVYFAVKNAL 326 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 53/250 (21%), Positives = 110/250 (44%), Gaps = 8/250 (3%) Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE---SEATHY 404 + H+P Y ++ + + + + + N E Sbjct: 432 PLPKEPHIPSYKAVSSSVVVTVDDDTDDIHVTAPQTDEGFRFINANPVTVERIDEPKPEK 491 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 + + YI+ + + L+I+D+HAAHER+ FEK++++F + TSQ L+ + Sbjct: 492 TSVRVIGEFLKTYILCEAGEELIIIDKHAAHERIRFEKLKEEFVT---TSQLLIDKTELK 548 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L E + E+ E + + GI+ + + I +P+++ K + +++ D+ +++++ Sbjct: 549 LSPEEYEALHEYYEYVEQSGIELVFCDDSTVQITAMPSVV-KCSPQEIVSDVAQRLMNTA 607 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 T +++L TMAC +I++ +E+ L + + C HGRP L Sbjct: 608 TDQK-GALFDDMLHTMACKSAIKAHDDTDILELQALADRVMNDRTIRFCPHGRPVMTALS 666 Query: 585 LSDIEKLFGR 594 IE+ F R Sbjct: 667 KYRIERFFNR 676 >gi|313114065|ref|ZP_07799617.1| DNA mismatch repair protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310623474|gb|EFQ06877.1| DNA mismatch repair protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 713 Score = 324 bits (831), Expect = 2e-86, Method: Composition-based stats. Identities = 114/330 (34%), Positives = 181/330 (54%), Gaps = 5/330 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + IAAGE++ERP+ +KEL+ENS+DA +++V I GG +I+DNG G Sbjct: 4 IHVLDKHTAELIAAGEVVERPASVVKELLENSIDAGATQVTVSIESGGVKLIEISDNGTG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E I A RH TSKI DD +NIHT GFRGEAL SI +V+ + L +R + Sbjct: 64 IEAEYISTAFIRHATSKIETPDDLTNIHTLGFRGEALASIASVARVELTTRTEVDEFATV 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + S P A GT + V+DLF+ PAR+ FLK + E ++D + +A+++P Sbjct: 124 YRIEGGEEVSREPGARAVGTTIRVKDLFYNTPARMKFLKKDSSEGTFVSDTVTHVALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +VS F +Y +G V+G +F + +EL + + G P Sbjct: 184 EVSVKFIREGKLQYV---TPGDGQLRGAAYAVLGREFSRDLIELKNQEGVYRITGLVTPP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + + +INGR V+++ +++ + A+ T+ G++P +LLLE+ VDVNVH Sbjct: 241 KSCRASRSMQHFYINGRYVRNRTMMAGMEMAFKGTMMQGKFPGGILLLEMPADLVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 PAK RF + + + +++ A+ + G Sbjct: 301 PAKIEARFARENDVFDVVYHAVKLALAQPG 330 Score = 173 bits (438), Expect = 9e-41, Method: Composition-based stats. Identities = 69/294 (23%), Positives = 132/294 (44%), Gaps = 11/294 (3%) Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP-KTHLPKYATSLTNTQE 367 +N ++ F+ K K + + + K H P+ + N + Sbjct: 421 QNEDMLDPFVTLHSPKLETTKAPEPFRAAANEAQLDVEPEFGETKLHSPQDHMAAWNPAQ 480 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL-------GIACAQIHQNYIIS 420 + +E + D P +E + E E ++ ++ + YI++ Sbjct: 481 EAPKEEPESAPCVETEPDAPEAAEQETVLAEPEQMNFDPTADQPEPLRYVGEVFRTYILA 540 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 + D L ++D+HAAHER ++EK+ ++ + + SQ LL P IDL E ++++ L Sbjct: 541 ERGDELCLIDKHAAHERQLYEKLAANYGN--VPSQMLLEPAAIDLAAEEKQALLDNIPLL 598 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 G++ FG N + +R +PA + +N LL +I ++++ L + E +L ++ Sbjct: 599 ENAGLEIADFGGNTVVLRAVPADVEPQNAESLLVEIANKLL-KGGHDALNEHTEWVLHSI 657 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C +I++G K E+ L ++ C HGRP +KL ++EK FGR Sbjct: 658 SCRAAIKAGDKSSPQELLALAEKILSGEVPPFCPHGRPCVLKLTRKELEKQFGR 711 >gi|148285056|ref|YP_001249146.1| DNA mismatch repair protein [Orientia tsutsugamushi str. Boryong] gi|146740495|emb|CAM81051.1| DNA mismatch repair protein [Orientia tsutsugamushi str. Boryong] Length = 680 Score = 324 bits (830), Expect = 3e-86, Method: Composition-based stats. Identities = 136/426 (31%), Positives = 241/426 (56%), Gaps = 9/426 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS+ IN+IAAGE++ERP+ +KEL+ENS+D+ + +V+ + GK+ ++DNG G Sbjct: 4 IKYLSDTTINRIAAGEVVERPASVVKELVENSIDSGAMKVDITLEKSGKNLIIVSDNGCG 63 Query: 63 MTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 M++E++ A++RH TSK+++ D NI+TFGFRGEALPSI +VS + ++++ ++ +I Sbjct: 64 MSAEDLETAIERHTTSKLNENDIMNINTFGFRGEALPSIASVSRMRIVTKSKLHDQAHEI 123 Query: 122 AIS--GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + + P GT +EVRDLFF PARL FL+S++ E + DV++R+AI+Y Sbjct: 124 NVHGGVKTKINSLPQLQLTGTKIEVRDLFFATPARLKFLRSDRTEYIVCYDVVKRLAISY 183 Query: 180 PKVSFTFSTIKSNRYKMNFQ---STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 P ++F+ K+ S + RIS+++ ++FI+NA+ + + +E+++ G+ Sbjct: 184 PHIAFSLVHDDKTILKLKANAQLSFDDARKSRISEILSKNFIDNAISIGIERDELSITGF 243 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 +PT+N+ +A +F+N R V+DK +++ IR AY + RYP+VV+ + + P +D Sbjct: 244 VSVPTYNKASAEDQLLFVNNRPVKDKLLMTAIRLAYQGVLARERYPIVVIFISVAPHFID 303 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHP KS +RF + +++R II +I++A+ SSV + Sbjct: 304 VNVHPTKSEVRFHDSSLVRGIIISAIKQALLNTSQLVSSVAASDANKYMKPQYDTGISEK 363 Query: 357 KYATSLTNTQEKLFLQE---NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 + ++ LQE N ++ + N+ V ++E + I + Sbjct: 364 LELSKDIKNIQQFPLQELVNNFSKDFNVNLKSKFQDVQANNFVSDNEQQKIESTIENIKF 423 Query: 414 HQNYII 419 + Sbjct: 424 FSAFNQ 429 Score = 177 bits (448), Expect = 7e-42, Method: Composition-based stats. Identities = 95/288 (32%), Positives = 155/288 (53%), Gaps = 3/288 (1%) Query: 310 NPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKL 369 N + + + N++ S++ + K S+F+Q + + + Sbjct: 392 NLKSKFQDVQANNFVSDNEQQKIESTIENIKFFSAFNQLGSNTESNQHISILDDDKTTDD 451 Query: 370 FLQENRLSTNDLLPSDDPTYSEDNDPVEES--EATHYQLGIACAQIHQNYIISQTTDGLV 427 N + + + + + ND + ++ LG+ACAQ H NYI++QT D L+ Sbjct: 452 ITAPNIATNEKVDANKQESVQKLNDSFCNNFGDSYQLPLGLACAQFHGNYILAQTIDSLI 511 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE-GECALIMEHDEDLHRLGIK 486 IVDQHAAHER+ +E +R F + +I Q LL P+++ L + + + +++ LG+ Sbjct: 512 IVDQHAAHERITYENLRSQFQAGQIIRQRLLMPQVVILPDIVRVEKLCDKMQEILALGMG 571 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 ER G + + E+PAIL +I ++ D+ D ++ + L D +E IL + +CY SI Sbjct: 572 FERCGDVQVKVLEMPAILQSVDIEAVVNDVADYLLTTDDHILLADMVEKILQSYSCYHSI 631 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 RSGR + EMN LLR++E P S QCNHGRPT+++ +L DIEKLFGR Sbjct: 632 RSGRILTIAEMNSLLRQIETTPFSGQCNHGRPTYVRFELKDIEKLFGR 679 >gi|317495809|ref|ZP_07954172.1| DNA mismatch repair protein MutL [Gemella moribillum M424] gi|316913986|gb|EFV35469.1| DNA mismatch repair protein MutL [Gemella moribillum M424] Length = 689 Score = 323 bits (828), Expect = 6e-86, Method: Composition-based stats. Identities = 112/335 (33%), Positives = 182/335 (54%), Gaps = 6/335 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI LS ++ N+IAAGE++ERP+ +KEL+ENSLDA S+ ++ +I G +I DNG Sbjct: 3 KINILSAELSNKIAAGEVVERPASVVKELVENSLDAGSTNIKIIIKEFGIEQIRIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++++++ A RH TSKI + D +I T GFRGEAL SI +VS +T+ S G Sbjct: 63 GISNDDLERAFLRHATSKIREDYDLFHIKTLGFRGEALASISSVSRVTIKSC-AGEAQGK 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + K+ S A GT + V +LF+ PARL +L++ E IT+VI + A++Y Sbjct: 122 MLVLEAGKVISEEYYAPIKGTDLSVENLFYNTPARLKYLRNAHTEQANITNVIYKFALSY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P VSF +K +G+ + +S++ N + + +++ + GY + Sbjct: 182 PNVSFELHVDDKITFKTY---GDGDVHKILSKIYNMSVARNMISFSGNNDDYKVYGYISV 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +FINGR +++ I ++I AY + RYP+ V+ +++DP +DVNV Sbjct: 239 PDETRASKNYINIFINGRYIRNYIIQNSIIDAYGTLLMKNRYPLCVINIDMDPILLDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 HP K +R + + I I + + Sbjct: 299 HPTKQEVRLSKEAELISLIKGVISERLANYTYIPQ 333 Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 71/303 (23%), Positives = 142/303 (46%), Gaps = 11/303 (3%) Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 D ++H + + N + IR Q I+ S + + K Sbjct: 392 DNDIHKLQEELNSNNESHIRR-----QQTEISGMESSLPDLSYTARPRENYTKYGDKPTK 446 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND----PVEESEATHYQLGIACA 411 + + ++ + + + ++ + D+ + E + E E A Sbjct: 447 KEIENFMNFSKREEIGEATKEEISNTIVKDNSHFDEIKNLKIVQDESMEVKTLPDLKVLA 506 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 QI + YI+S+ + L ++DQHAA ER +EK+++DF K + +L P + D E A Sbjct: 507 QIFKTYILSEADNKLYLIDQHAAAERYNYEKLQRDFIDRKNYKKQMLIPMMFDFSIEEAA 566 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 I + E LGI E FG N+ +RE P + +++ ++++ I++++++++ T + Sbjct: 567 EIRNNFEKFTELGIDFEEFGDNSYVVREFPGWI-EEDEEEMIKIIVEKVLNNNKI-TFNE 624 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 + +A +C SI++ + + +EMN+++ ++ K N C HGRP K++ D+EK+ Sbjct: 625 LRNDAIAMASCKMSIKANQILSEVEMNKVISDLYKCKNPFTCPHGRPIITKMEKKDLEKM 684 Query: 592 FGR 594 F R Sbjct: 685 FKR 687 >gi|120609987|ref|YP_969665.1| DNA mismatch repair protein MutL [Acidovorax citrulli AAC00-1] gi|120588451|gb|ABM31891.1| DNA mismatch repair protein MutL [Acidovorax citrulli AAC00-1] Length = 698 Score = 323 bits (827), Expect = 6e-86, Method: Composition-based stats. Identities = 122/388 (31%), Positives = 198/388 (51%), Gaps = 24/388 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ A++EL++N+LDA + ++ + GG + D+G Sbjct: 11 PIRDLPDELISQIAAGEVVERPASAVRELVDNALDAGARQITVRLLAGGVRLIAVEDDGC 70 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+P+A++RH TSKI++ D ++ T GFRGEAL +I +VS + L+SR + T Sbjct: 71 GIPPEELPVALRRHATSKITNLHDLESVATMGFRGEALAAIASVSEMALLSRTEEQPTAF 130 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ GT VEV++LFF+ PAR FLK++ E + +RR A+A Sbjct: 131 LLDARSGELRPAARAR---GTTVEVKELFFSTPARRKFLKTDATELAHCIEAVRRHALAR 187 Query: 180 PKVSFTFSTIKSNRYKMNFQ---------------STNGNFPERISQVIGEDFINNAVEL 224 P V F + + R+S V+GEDF+ ++ + Sbjct: 188 PDVGFAIWHEGKLVEQWRAALVPPAASADGTVDDAALEEALARRLSDVLGEDFLAESIAV 247 Query: 225 NEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 +S +T+ G G+P R A+Q + ++NGR V+DK + R+AY + + + PV Sbjct: 248 RHRSGPVTVTGRAGLPDAARSRADQQFCYVNGRFVRDKVLTHAARSAYEDVLHGQKQPVY 307 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 L + IDP +VDVNVHP K +RFR+ + + A+ + + Sbjct: 308 ALYVAIDPMRVDVNVHPTKIEVRFRDSREVHQAVR----HAVENALAAPRAQALAAAAQG 363 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQ 372 + AP T P T+ L Q Sbjct: 364 AAEAGAPATDSPAPPTARVAPPAALPRQ 391 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 75/192 (39%), Positives = 115/192 (59%), Gaps = 1/192 (0%) Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN-STKITSQTLLTPEI 462 + LG A AQIH YI+++ G+VIVD HAAHER+++E+++ + S +I SQ LL P Sbjct: 505 WPLGRAVAQIHGVYILAENAQGMVIVDMHAAHERIVYERLKAQVDASERIASQPLLIPAT 564 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 E A H + L LG++ F P +A+R +P L++ + +L R ++ E+ Sbjct: 565 FAATPEEVATAEAHADTLDMLGLEVSPFSPRTLAVRAVPTSLAQGDAVELARSVLAELAA 624 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 T +Q IL TMAC+G++R+ R++ EMN LLR+ME S QCNHGRPT+ + Sbjct: 625 HDATTVVQRARNEILGTMACHGAVRAHRRLTLDEMNALLRQMEVTERSDQCNHGRPTWRQ 684 Query: 583 LKLSDIEKLFGR 594 L + +++ LF R Sbjct: 685 LSMRELDALFLR 696 >gi|319941732|ref|ZP_08016054.1| DNA mismatch repair protein MutL [Sutterella wadsworthensis 3_1_45B] gi|319804665|gb|EFW01532.1| DNA mismatch repair protein MutL [Sutterella wadsworthensis 3_1_45B] Length = 675 Score = 323 bits (827), Expect = 7e-86, Method: Composition-based stats. Identities = 127/388 (32%), Positives = 209/388 (53%), Gaps = 12/388 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +LS ++I+QIAAGE+IERP+ +KEL+EN++DA + R+E I GGG S ++DNG Sbjct: 6 PIAELSSQLISQIAAGEVIERPASVVKELVENAVDAGADRIEVRIDGGGLSRILVSDNGC 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+P+AV+RH TSK++ D T GFRGEAL S+ +V+ L + S+ Sbjct: 66 GIPKAELPLAVKRHATSKVATLADLEAATTLGFRGEALASVDSVAELIIESKAAGAGEAW 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + + M GT VEV DLF+ PAR F+KSE ET +T + R+A+A Sbjct: 126 RIQRGAVEPAGG----MTGGTRVEVTDLFYKTPARRKFMKSESTETAHVTAQMERIALAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+ +F+ ++ +S +RI ++ +DF ++ +S+ L G G+ Sbjct: 182 PQAAFSLYANGRRAMQLEAESA----EDRIKALMPKDFKEACRPVSAESDGWKLTGLVGL 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT +R A+ Y+F+NGR ++D+ + +R AYA+ + P+ L L I P +VD NV Sbjct: 238 PTISRTRADGQYLFVNGRFIRDRVMNHAVRAAYADVLHGQAQPLYCLFLTIPPEEVDSNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY- 358 HP K+ +RFR+ + + +FI+ +++ A+ + + ++ + P Sbjct: 298 HPTKTEVRFRDSSRVHSFILHAVEAALAPPLAQAAGGAAVVPLADASLGSVPARREAALF 357 Query: 359 -ATSLTNTQEKLFLQENRLSTNDLLPSD 385 +SL QE + + N L + Sbjct: 358 GRSSLAEPQEAIATKVPADHPNALWGAP 385 Score = 193 bits (490), Expect = 8e-47, Method: Composition-based stats. Identities = 73/237 (30%), Positives = 128/237 (54%), Gaps = 5/237 (2%) Query: 363 TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQT 422 N+ + + L L + + P++ LG A AQ+ YI+++ Sbjct: 437 PNSSSEEAPEPKSLEPQKLPQMEQEEHPALFTPLQAQSDGRGFLGRALAQVAGVYILAEN 496 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD--EDL 480 GLVIVD HAA ER+++E+M++ +K+ Q LL P ++ + + A E + E Sbjct: 497 ASGLVIVDMHAAAERVLYERMKRAMAESKLAVQELLMPLVVRVTPAQYAAFEEFEKGEVF 556 Query: 481 HRLGIKAERFGPNAIAIREIPAILSK---KNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 LG+ A+A+R +PA++++ + LLR+++D++ + + + IL Sbjct: 557 PALGLICTGADEGAVALRGVPAMIAEAPLGELEALLREVLDDLAEFGASEAMDVLKNRIL 616 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +TMAC+ + R+ RK+ EM+ LLR+MEK + QCNHGRPT+ L ++D+++LF R Sbjct: 617 STMACHNAFRANRKLSLPEMDALLRDMEKTERADQCNHGRPTWTTLSMTDLDRLFMR 673 >gi|313127387|ref|YP_004037657.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM 11551] gi|312293752|gb|ADQ68212.1| DNA mismatch repair protein MutL [Halogeometricum borinquense DSM 11551] Length = 787 Score = 322 bits (826), Expect = 8e-86, Method: Composition-based stats. Identities = 117/427 (27%), Positives = 203/427 (47%), Gaps = 20/427 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L ++ IN+IAAGE++ERP+ +KEL+ENSLDA+++R+ + GG ++ D+G Sbjct: 8 TIRALDDQTINRIAAGEVVERPASVVKELVENSLDADANRISVAVDSGGTEGVRVRDDGV 67 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQNNT- 117 GM E++ MAV+ H TSKISD D + + T GFRGEAL +I AVS LT+ S+P +T Sbjct: 68 GMDREDLQMAVEEHTTSKISDINDLESGVGTLGFRGEALHTISAVSRLTVRSKPRGGDTG 127 Query: 118 ----------GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNL 167 G ++ + G +++ VRP GT+VEV DLF+ PAR FLK+ E + Sbjct: 128 RGSDAPGNDAGTELRVEGGEVTDVRPAGCPEGTVVEVEDLFYNTPARKKFLKTTATEFDH 187 Query: 168 ITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK 227 + V+ + A+A P+V+ + + G+ + V G + + + + Sbjct: 188 VNTVVTQYALANPEVAISLEHDDREVF---ATEGRGSLESTVLSVYGREVAESMTRVEHE 244 Query: 228 SNEIT---LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 ++ + G P R + F+N R V + + + AY + RYP Sbjct: 245 PDDGPVASVTGLVSHPETTRSARDYLSTFVNDRYVTARVLREAVLDAYGGQLATDRYPFA 304 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 VL +++ P VDVNVHP K +RF + + +++ + +++ A+ ++G+ SS + Sbjct: 305 VLFVDVPPNTVDVNVHPRKMEVRFDDESGVKSAVESAVESALLEQGLIRSSAPRGRSAPD 364 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 + + Q +R ++ + + + + + Sbjct: 365 EVEPAPESPTAEARGGKGHSPQPSQSDGRSRSGSSPTVSDSPRSATSGTESARSTPNAES 424 Query: 405 QLGIACA 411 Sbjct: 425 AHSDRTG 431 Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 4/199 (2%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 E Q+ YI+++T DG+V++DQHAA ER+ +E+++++ +T+Q L Sbjct: 579 PEFDTLPSMRVLGQLLDTYIVAETADGMVLIDQHAADERVNYERLQRELAGD-VTTQALA 637 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P ++L E AL E+ + L + G A R G + +R +PA+ ++ P+LLRD + Sbjct: 638 DPVEMELTAREAALFEEYQDALAQTGFHAGRTGERTVEVRSVPAVFAEALRPELLRDALT 697 Query: 519 EII---DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 + + T+ + +LA +ACY S+ + + LL ++ N C H Sbjct: 698 AFVSEGEDGGRETVDAVADELLADLACYPSVTGNTSLTEGSVLDLLSALDDCENPYACPH 757 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRP I+ +IE F R Sbjct: 758 GRPVVIEFDRDEIEDRFER 776 >gi|168334524|ref|ZP_02692685.1| DNA mismatch repair protein MutL [Epulopiscium sp. 'N.t. morphotype B'] Length = 773 Score = 322 bits (826), Expect = 9e-86, Method: Composition-based stats. Identities = 120/362 (33%), Positives = 197/362 (54%), Gaps = 7/362 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L INQIAAGE++ERP+ +KEL+ENS+DA ++ + I+ GG +I DNG G Sbjct: 2 IKLLDPLTINQIAAGEVVERPASVVKELVENSIDAGATVITVEISKGGVELIKIIDNGSG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 EI +A +H TSKIS D ++ T GFRGEAL SI +++ + L S+ TG + Sbjct: 62 FQLXEIEIAFLKHSTSKISTTSDLEHVLTMGFRGEALSSISSIAKVELTSKNKDXATGRR 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + +SG I++ VA + GT ++DLFF +PAR FLKS VE ITD+I ++A+++P Sbjct: 122 VTVSGGTITNTMDVAASQGTTFVIQDLFFNVPARKAFLKSAGVEAGRITDIIYKLALSHP 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++F + ++ N N E I + G++ + + + + + L+G G Sbjct: 182 NIAFKYIKDSKPIFQTR---GNNNLKEVIFNIFGKEISDGTIPIQYATKDFKLEGRIGKL 238 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 T ++ N + FINGR + +K + AY ++PV +L + + +DVNVH Sbjct: 239 TLSKSNRSWELFFINGRYITNKIFNEAVEEAYKTLTMAKKFPVAILRVTMPASHLDVNVH 298 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +RF++ I+ II +I++ +++ + ++ + S H+ A K T Sbjct: 299 PAKLEVRFKDSDAIKTAIINAIKQTLSEINLMP--TFAEALPKSAHKKPALNIDQAKLVT 356 Query: 361 SL 362 Sbjct: 357 PA 358 Score = 175 bits (444), Expect = 2e-41, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 4/185 (2%) Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 QI + Y + + D ++I+DQHAAHER+I+EK+ +F+S + SQ LL P I Sbjct: 591 LGQIFETYWMIKYMDKVLIMDQHAAHERVIYEKLLAEFHSNTVDSQQLLCPMIFRPTANT 650 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 LI H L + G + E + IR +P + ++ ++ +++ ++ Sbjct: 651 LPLIAAHFALLEKAGFEIEMLNEITMIIRGVPFLFNQPMAQSQVKSFLEDFGNNKGISLP 710 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 +++I MAC +I+ K+ E L+ + N C HGRPT I L+ SDIE Sbjct: 711 EEKI----IRMACKAAIKGNHKISKAECKNLVESLLVLENPFSCPHGRPTLISLEKSDIE 766 Query: 590 KLFGR 594 KLF R Sbjct: 767 KLFRR 771 >gi|164688071|ref|ZP_02212099.1| hypothetical protein CLOBAR_01716 [Clostridium bartlettii DSM 16795] gi|164602484|gb|EDQ95949.1| hypothetical protein CLOBAR_01716 [Clostridium bartlettii DSM 16795] Length = 687 Score = 322 bits (826), Expect = 9e-86, Method: Composition-based stats. Identities = 130/491 (26%), Positives = 237/491 (48%), Gaps = 18/491 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + IN+IAAGE++ERPS +KEL+EN++D+ +++V I GGK +I+DNG G Sbjct: 5 INILDDLTINKIAAGEVVERPSSVVKELLENAIDSGATQVVVDITDGGKKCIKISDNGEG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + S E+ RH TSKI DD ++++ GFRGEAL SI AVS++ ++++ + G + Sbjct: 65 ILSSEVEKCFLRHATSKIKSIDDLFDLYSLGFRGEALASISAVSNIEMVTKTKEEMIGTK 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I +SG KI PV GT + V+DLFF P R FLKS ET I+D+I ++AI P Sbjct: 125 IVLSGSKIIKKEPVGTKDGTTITVKDLFFNTPVRAKFLKSTHAETINISDLINKLAIGNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V + + I + G++ +N +E++ + +I + GY G Sbjct: 185 NVRLKYINNSKLMLN---TPGDNKLISVIRSIYGKEITDNLIEVDYEDEKIKISGYIGNN 241 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N N +++IN R V+ K IL I +Y IP+ ++ V L ++I+P ++DVN+H Sbjct: 242 NIYRSNKNLQHIYINKRFVKSKVILDAINESYKSIIPINKFGVCFLNIKINPSEIDVNIH 301 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS-------TSSVLSKKMISSFHQDNAPKT 353 P K ++F++ + I I+ + + +S + ++ ++ Sbjct: 302 PTKLEVKFQDEKEVYIKIRDVIKNKLLNISLIGKYKSYDSSENYVQNKLNQIEENKTEVQ 361 Query: 354 HLPKYATSLTNTQEKL-FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 ++ +E + +++ + D T+ + +EE + + Sbjct: 362 NINVAKNIEYKVKENNEYENKDQEAIKINERDDLSTFKSFKEALEEK----NHIDKSKED 417 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +H N ++ + D+ E+ + + S+ + ++ + + + Sbjct: 418 LHDNISYGESLNN-NNFDRIHEEEQSDYYSNMGYIENNTKESKYNDIDKKLEEISTQASF 476 Query: 473 IMEHDEDLHRL 483 + E D+ L ++ Sbjct: 477 LEEQDDILDKI 487 Score = 194 bits (492), Expect = 4e-47, Method: Composition-based stats. Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 3/221 (1%) Query: 374 NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 +ST + + ++ I YI+ + + ++DQHA Sbjct: 468 EEISTQASFLEEQDDILDKIVDNSQNTHFRASDFKVIGTILNTYIVLEKGTSMYLLDQHA 527 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 AHE++++E+ F + I Q LL P +I+L + + ++ + G + E FG N Sbjct: 528 AHEKVLYEEYMTKFKNQNIDMQMLLDPIVIELSSVDMLDVEKNLNLFMKFGFEIEIFGDN 587 Query: 494 AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQ 553 I +R +P I + + IID I D ++Y L+ + +A+M+C +I++ K+ Sbjct: 588 HIMVRGVPNIFGVAQSEKFIFQIIDNIGDLESSYDLK---MDKIASMSCRAAIKANDKIH 644 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 E+N LL +MEK N C HGRP+ +++ +IEK+F R Sbjct: 645 FDEINSLLSKMEKCENPYTCPHGRPSMVEISKKEIEKMFKR 685 >gi|332976872|gb|EGK13694.1| DNA mismatch repair protein MutL [Desmospora sp. 8437] Length = 365 Score = 322 bits (825), Expect = 1e-85, Method: Composition-based stats. Identities = 114/360 (31%), Positives = 186/360 (51%), Gaps = 6/360 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L +++ N+IAAGE++ERP+ +KEL+EN+LDA + R+ I GG +++DNG G Sbjct: 4 IRLLDDQLANRIAAGEVVERPASVVKELVENALDAGADRIHIEIIEGGIRSIRVSDNGKG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M E+ +A +RH TSKI D +I + GFRGEALPSI +VS LTL + G + Sbjct: 64 MDREDALLAFERHATSKIRRERDLFSIRSLGFRGEALPSIASVSKLTLTTARA-EGIGTR 122 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G K+ S A +PGT V V +LFF PARL +LK+ E + + D + R A+A+P Sbjct: 123 LVLEGGKLLSTEDAARSPGTEVSVEELFFNTPARLKYLKTVNTEVSHVADHVGRQALAHP 182 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +SF ++ +G + G+ + ++ + + ++G P Sbjct: 183 GISFVLMHNGK---ELFRTPGDGKLLHVAHALYGKQVARKMLPVDAEDMDFKVEGLAAKP 239 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R N + + +NGR +++ + + Y +P+GRYP+VVL L +DP+ VDVNVH Sbjct: 240 EVTRSNRSYISIVVNGRYIRNIPVSQAVLRGYDTLLPIGRYPIVVLSLSMDPKLVDVNVH 299 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +R + I ++ + + + ++ + A+ Sbjct: 300 PAKLEVRLSKEQELCRLIEGGLKALFREHVLIPQAASPRREHHPEPHPVQQRLQWNNDAS 359 >gi|170761162|ref|YP_001787120.1| DNA mismatch repair protein [Clostridium botulinum A3 str. Loch Maree] gi|238688735|sp|B1KSA2|MUTL_CLOBM RecName: Full=DNA mismatch repair protein mutL gi|169408151|gb|ACA56562.1| DNA mismatch repair protein MutL [Clostridium botulinum A3 str. Loch Maree] Length = 666 Score = 322 bits (825), Expect = 1e-85, Method: Composition-based stats. Identities = 119/341 (34%), Positives = 183/341 (53%), Gaps = 5/341 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + N+IAAGE+IERP +KEL+ENS+DA + + I GG+ +I D+G Sbjct: 3 KINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +I A H TSKI+ +D I T GFRGEAL SI +VS L SR N G Sbjct: 63 GIYPIDIKNAFLPHATSKINSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNFGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G KI ++ N GT +EV DLF+ +PARL FLKS + +++ I+D++ R +A+ Sbjct: 123 EIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKFLKSARSDSSSISDIVNRFILAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF K GN + I V + N + + I++ G+ G Sbjct: 183 PDISFNLINKGKQSIK---SYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R + +F+N R V+ KFI + + A+ + + YP V+ ++I P +DVNV Sbjct: 240 PEISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK 340 HP KS ++F++ + I ++ +AI + + + K Sbjct: 300 HPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFTNFFNK 340 Score = 201 bits (510), Expect = 4e-49, Method: Composition-based stats. Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 1/224 (0%) Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 LQ+ + + L ++ T S + E Y Q + YI+ + L I+D Sbjct: 442 LQKGNKNPDALYLNEHNTNSSSINIKENKSNNFYVDMKIIGQFNNTYILIEKDKELYIID 501 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAAHE+++FEK + + + SQ LL+P +I+L E E + E+ + G E F Sbjct: 502 QHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKNSGFAVENF 561 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 G + I I+E+P IL K N+ L DI+ + + + T + I AT+AC ++++ Sbjct: 562 GESTINIKEVPLILGKPNVENLFMDILYNLKNMKSKETSTIKYNAI-ATLACKSAVKAND 620 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ E+ +L+ +M N C HGRPT IK L D+EK F R Sbjct: 621 NLKEEEIKKLIEDMLILNNPYTCPHGRPTMIKFTLKDLEKKFKR 664 >gi|325685682|gb|EGD27761.1| DNA mismatch repair protein HexB [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 394 Score = 322 bits (825), Expect = 1e-85, Method: Composition-based stats. Identities = 110/335 (32%), Positives = 179/335 (53%), Gaps = 7/335 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+EN++DA++SR+ + G + DNG Sbjct: 3 KIHELSENLTNQIAAGEVIERPASVVKELVENAIDAQASRIRVEVQHSGLKQISVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKI D D NI T GFRGEAL SI AV+H+ +++ T Sbjct: 63 GIAPDQVDLAFMRHATSKIQDEHDLFNIATLGFRGEALASIAAVAHVEILTSTDGQ-TAT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + A +G GT + V D+F+ PARL +LKS + E I D++ R+A+ + Sbjct: 122 RAAFAGGVKKFQEDAGSAKGTKITVGDIFYNTPARLKYLKSPKTELLKIVDIVNRIALGH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++S T ++ + NGN + ++ + G + + + + TL G Sbjct: 182 PEISLTLASDGK---VLLRTPGNGNLKQDVANIYGRKVAEKMLTVENEDPDFTLYGLVSE 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + N + +NGR +++ + S + Y + G+YP+ VL +E DP VDVNV Sbjct: 239 ANLTRSSRNFISILLNGRYIKNYQLSSALLDGYGNKLG-GKYPIAVLAIEADPLLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 HP K +R + I ++ +A+ + ++ Sbjct: 298 HPTKEEVRLSKEKELSRLITSAVTEALMDEDEASP 332 >gi|255002938|ref|ZP_05277902.1| DNA mismatch repair protein (mutL) [Anaplasma marginale str. Puerto Rico] gi|255004063|ref|ZP_05278864.1| DNA mismatch repair protein (mutL) [Anaplasma marginale str. Virginia] Length = 419 Score = 322 bits (825), Expect = 1e-85, Method: Composition-based stats. Identities = 129/364 (35%), Positives = 200/364 (54%), Gaps = 9/364 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L K +N+IAAGE+I+ P+ +KEL+ENS+DA ++ + +I GG++ + D+G Sbjct: 1 MPIVVLDAKTVNKIAAGEVIDCPASVVKELVENSIDAGATTINVLIDKGGRNLISVIDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+ A H TSK+ D D +NI + GFRGE L SI AV+ ++S+ Sbjct: 61 CGIPRDEMERAFICHATSKLPDNDLNNIRSMGFRGEGLTSIAAVARTKMVSKYRGCTEAW 120 Query: 120 QIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I + GEK + P A+ GT +EVRDLFF P RL FL++E+ ET I D++ R A A Sbjct: 121 SIVLEGGEKTRDLSPEALPCGTSIEVRDLFFATPTRLKFLRTEKAETQSIVDLMYRFATA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQV--IGEDFINNAVELNEKSNEITLQGY 236 +F+ + +K + R+ ++ G+ F ++E+ S+ I + GY Sbjct: 181 RFSTAFSLTIADKQIFKYPA---REDLMSRLWEMKPFGDAFREQSLEVRFHSDAINITGY 237 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 +PTFNR + Y F+NGR V + I++AY+E IP R+PVVV+ +EI P VD Sbjct: 238 ISVPTFNRSRPDMIYTFVNGRPVHSTLFMGAIKSAYSEFIPRDRHPVVVMCMEILPGDVD 297 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS--TSSVLSKKMISSFHQDNAPKTH 354 VNVHP+K +RFRN + + +++++ A++ + F DN P Sbjct: 298 VNVHPSKLEVRFRNRKQVYSVVVEALATALSSNVYRELPPRTPVGGGLDHFAVDNTPVLD 357 Query: 355 LPKY 358 P Y Sbjct: 358 TPHY 361 >gi|322806036|emb|CBZ03603.1| DNA mismatch repair protein MutL [Clostridium botulinum H04402 065] Length = 666 Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats. Identities = 119/341 (34%), Positives = 183/341 (53%), Gaps = 5/341 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + N+IAAGE+IERP +KEL+ENS+DA + + I GG+ +I D+G Sbjct: 3 KINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +I A H TSKI+ +D I T GFRGEAL SI +VS L SR N G Sbjct: 63 GIYPIDIKNAFLPHATSKINSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNFGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G KI ++ N GT +EV DLF+ +PARL FLKS + +++ I+D++ R +A+ Sbjct: 123 EIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKFLKSARSDSSSISDIVNRFILAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF K GN + I V + N + + I++ G+ G Sbjct: 183 PDISFNLINKGKQSIK---SYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R + +F+N R V+ KFI + + A+ + + YP V+ ++I P +DVNV Sbjct: 240 PEISRKSRTNQSIFVNKRYVKSKFIAAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK 340 HP KS ++F++ + I ++ +AI + + + K Sbjct: 300 HPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFTNFFNK 340 Score = 200 bits (509), Expect = 5e-49, Method: Composition-based stats. Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 1/224 (0%) Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 LQ++ + + L ++ T S + E Y Q + YI+ + L I+D Sbjct: 442 LQKDNKNPDTLYLNEHNTNSSSINIKENKPNNFYVDMKIIGQFNNTYILIEKDKELYIID 501 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAAHE+++FEK + + + SQ LL+P +I+L E E + E+ + G E F Sbjct: 502 QHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKNSGFSVETF 561 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 G I I+E+P IL K N+ L DI+ + + + T + I AT+AC ++++ Sbjct: 562 GEYTINIKEVPLILGKPNVENLFMDILYNLKNMKSKETSTIKYNAI-ATLACKSAVKAND 620 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ E+ +L+ +M N C HGRPT IK L D+EK F R Sbjct: 621 NLKEEEIKKLIEDMLILNNPYTCPHGRPTMIKFTLKDLEKKFKR 664 >gi|153938478|ref|YP_001391054.1| DNA mismatch repair protein [Clostridium botulinum F str. Langeland] gi|166232085|sp|A7GE44|MUTL_CLOBL RecName: Full=DNA mismatch repair protein mutL gi|152934374|gb|ABS39872.1| DNA mismatch repair protein MutL [Clostridium botulinum F str. Langeland] gi|295319104|gb|ADF99481.1| DNA mismatch repair protein MutL [Clostridium botulinum F str. 230613] Length = 666 Score = 322 bits (824), Expect = 2e-85, Method: Composition-based stats. Identities = 119/341 (34%), Positives = 182/341 (53%), Gaps = 5/341 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + N+IAAGE+IERP +KEL+ENS+DA + + I GG+ +I D+G Sbjct: 3 KINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +I A H TSKI+ +D I T GFRGEAL SI +VS L SR N G Sbjct: 63 GIYPIDIKNAFLPHATSKINSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNFGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G KI ++ N GT +EV DLF+ +PARL FLKS + +++ I+D++ R +A+ Sbjct: 123 EIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKFLKSARSDSSSISDIVNRFILAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF K GN + I V + N + + I++ G+ G Sbjct: 183 PDISFNLINKGKQSIK---SYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R + +F+N R V+ KFI + + A+ + + YP V+ ++I P +DVNV Sbjct: 240 PEISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK 340 HP KS ++F++ + I ++ AI + + + K Sbjct: 300 HPTKSEVKFKDERAMFKTIFDAVHGAIKGELKESFTNFFNK 340 Score = 201 bits (510), Expect = 4e-49, Method: Composition-based stats. Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 1/224 (0%) Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 LQ++ + + L ++ T S + E Y Q + YI+ + L I+D Sbjct: 442 LQKDNKNPDTLYLNEHNTNSSSINIKENKPNNFYVDMKIIGQFNNTYILIEKDKELYIID 501 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAAHE+++FEK + + + + SQ LL+P +I+L E E + E+ + G E F Sbjct: 502 QHAAHEKVLFEKFKSEIENRYVISQILLSPVVIELSEDEFNIYEENKDIFKNSGFSVETF 561 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 G I I+E+P IL K N+ L DI+ + + + T + I AT+AC ++++ Sbjct: 562 GEYTINIKEVPLILGKPNVENLFMDILYNLKNMKSKETSTIKYNAI-ATLACKSAVKAND 620 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ E+ +L+ +M N C HGRPT IK L D+EK F R Sbjct: 621 NLKEEEIKKLIEDMLILNNPYTCPHGRPTMIKFTLKDLEKKFKR 664 >gi|104774421|ref|YP_619401.1| DNA mismatch repair protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|123251846|sp|Q1G939|MUTL_LACDA RecName: Full=DNA mismatch repair protein mutL gi|103423502|emb|CAI98404.1| DNA mismatch repair protein MutL [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 653 Score = 322 bits (824), Expect = 2e-85, Method: Composition-based stats. Identities = 110/335 (32%), Positives = 179/335 (53%), Gaps = 7/335 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LSE + NQIAAGE+IERP+ +KEL+EN++DA++SR+ + G + DNG Sbjct: 3 KIHELSENLTNQIAAGEVIERPASVVKELVENAIDAQASRIRVEVQHSGLKQISVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A RH TSKI D D NI T GFRGEAL SI AV+H+ +++ T Sbjct: 63 GIAPDQVDLAFMRHATSKIQDEHDLFNIATLGFRGEALASIAAVAHVEILTSTGGQ-TAT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + A +G GT + V D+F+ PARL +LKS + E I D++ R+A+ + Sbjct: 122 RAAFAGGVKKFQEDAGSAKGTKITVGDIFYNTPARLKYLKSPKTELLKIVDIVNRIALGH 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++S T ++ + NGN + ++ + G + + + + TL G Sbjct: 182 PEISLTLASDGK---VLLRTPGNGNLKQDVANIYGRKVAEKMLTVENEDPDFTLYGLVSE 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + N + +NGR +++ + S + Y + G+YP+ VL +E DP VDVNV Sbjct: 239 ANLTRSSRNFISILLNGRYIKNYQLSSALLDGYGNKLG-GKYPIAVLAIEADPLLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 HP K +R + I ++ +A+ + ++ Sbjct: 298 HPTKEEVRLSKEKELSRLITSAVTEALMDEDEASP 332 Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 91/229 (39%), Gaps = 9/229 (3%) Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLV 427 K + Q + T + + + + + Y++++ L Sbjct: 428 KSWDQHVKEQTALPPFAGGEEAASPVTSKADQLLRQHLPALRLLGQMGGYLLAEHEGDLY 487 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 ++DQ AA RL ++++ + Q LL P + D + + + L +LG++ Sbjct: 488 LIDQVAARRRLEYDQILASLEKDENYQQGLLEPLVFDFSVYDYQKLKDQLPLLRQLGLEM 547 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS-- 545 E FG N + + P L K + +R+++D+++ S +++L +A + Sbjct: 548 EDFGQNTLLMHSYPTWL-KGEVTVQVRELLDQLLSSRENDG-----KSLLKLVAAKAAES 601 Query: 546 -IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + + E LL ++ + + G+ ++L +D+ KLF Sbjct: 602 NVSRRVNLTGAEAADLLLRLQTASDPYRDASGQLAVVRLSQNDLSKLFK 650 >gi|153933845|ref|YP_001384056.1| DNA mismatch repair protein [Clostridium botulinum A str. ATCC 19397] gi|153936560|ref|YP_001387597.1| DNA mismatch repair protein [Clostridium botulinum A str. Hall] gi|166232084|sp|A7FUK9|MUTL_CLOB1 RecName: Full=DNA mismatch repair protein mutL gi|152929889|gb|ABS35389.1| DNA mismatch repair protein MutL [Clostridium botulinum A str. ATCC 19397] gi|152932474|gb|ABS37973.1| DNA mismatch repair protein MutL [Clostridium botulinum A str. Hall] Length = 666 Score = 321 bits (823), Expect = 2e-85, Method: Composition-based stats. Identities = 118/341 (34%), Positives = 183/341 (53%), Gaps = 5/341 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + N+IAAGE+IERP +KEL+ENS+DA + + I GG+ +I D+G Sbjct: 3 KINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +I A H TSKI+ +D I T GFRGEAL SI +VS L SR N G Sbjct: 63 GIYPIDIKNAFLPHATSKINSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNFGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G KI ++ N GT +EV DLF+ +PARL FLKS + +++ I+D++ R +++ Sbjct: 123 EIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKFLKSARSDSSSISDIVNRFILSH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF K GN + I V + N + + I++ G+ G Sbjct: 183 PDISFNLINKGKQSIK---SYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R + +F+N R V+ KFI + + A+ + + YP V+ ++I P +DVNV Sbjct: 240 PEISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK 340 HP KS ++F++ + I ++ +AI + + + K Sbjct: 300 HPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFTNFFNK 340 Score = 199 bits (507), Expect = 8e-49, Method: Composition-based stats. Identities = 70/224 (31%), Positives = 113/224 (50%), Gaps = 1/224 (0%) Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 LQ++ + + L ++ S + E Y Q + YI+ + L I+D Sbjct: 442 LQKDNKNPDILYLNEHNRNSSPINIKENKSNNFYVDMKIIGQFNNTYILIEKDKELYIID 501 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAAHE+++FEK + + + SQ LL+P +I+L E E + E+ + G E F Sbjct: 502 QHAAHEKVLFEKFKCEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKNSGFSVETF 561 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 G I I+E+P IL K N+ L DI+ + + + T + I AT+AC ++++ Sbjct: 562 GEYTINIKEVPLILGKPNVENLFMDILYNLKNMKSKETSTIKYNAI-ATLACKSAVKAND 620 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ E+ +L+ +M N C HGRPT IK L D+EK F R Sbjct: 621 NLKEEEIKKLIEDMLILNNPYTCPHGRPTMIKFTLKDLEKKFKR 664 >gi|293977959|ref|YP_003543389.1| DNA mismatch repair protein MutS [Candidatus Sulcia muelleri DMIN] gi|292667890|gb|ADE35525.1| DNA mismatch repair enzyme (predicted ATPase) [Candidatus Sulcia muelleri DMIN] Length = 536 Score = 321 bits (823), Expect = 2e-85, Method: Composition-based stats. Identities = 140/590 (23%), Positives = 268/590 (45%), Gaps = 60/590 (10%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 M I+ LS+ + N+IA+GE+I PS +KE++ENS+DA + ++ ++ GGK+ I D Sbjct: 1 MTNVIKFLSKNVSNKIASGEVIHNPSSILKEILENSIDAYAKNIKIILKNGGKNRIHIID 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 +G GM+ + + +R+ TSKI+ +D NI T GFRGEAL I +V+ + + +R +++ Sbjct: 61 DGIGMSKNDAIKSFERYSTSKINKIEDILNISTKGFRGEALSYISSVTQIEIETRYIESD 120 Query: 117 TGAQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 G ++ I K+ + P+AM+ G + ++++F+ IPA+ FLKS ++E I + ++ Sbjct: 121 IGIRLIIENGKLKYNPLPIAMDKGCSICIKNIFYNIPAKRKFLKSSKLELKNIINEFYKL 180 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A+++ ++F + + ++ ERI + GE +++ + +N + LQG Sbjct: 181 ALSHNDINFYLENDNKILFDLKS----SSYKERIIHIFGEKIKKFLIKIKKTTNLVKLQG 236 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y P + + N + Y+F+N R +++K I I T+Y I P L L ++P + Sbjct: 237 YITNPKYYKSNKLEQYLFLNKRFIKNKKIHDAIITSYEGLINKKYNPSYFLFLTMEPSKF 296 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 ++N+ P+K+ ++F + + I +I++ + K IS Sbjct: 297 NINISPSKTEVKFYDEICLCKQITSTIKECLGIKKIS----------------------- 333 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 FL + +E + QI+ Sbjct: 334 -------------NFLLKQVNVKKLSTREITYFNNEYKKLKNNKLKKSFNEKYKWIQIYN 380 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 YII L++VDQ+ AH+R++++ + +I P I + I + Sbjct: 381 KYIIGFLNYRLILVDQNRAHQRILYDYFDNNSFKKRI---KFKFPIEIKISNKNRFFIKK 437 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 L+ LG K + + ++ IP +L NI + + II+ + Sbjct: 438 ILYKLNNLGFKIYLI-KDIMLVKYIPIVLYIYNIYKFIEIIIEN----------GNLNNE 486 Query: 536 ILATMACY-GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 L C SI++G K+ +E+ L++ + + +GR + Sbjct: 487 FLYKKICKFFSIKNGEKLSKLEIKYLIKNLFDSNKPYYTPYGRKIIFNIN 536 >gi|241888857|ref|ZP_04776163.1| DNA mismatch repair protein MutL [Gemella haemolysans ATCC 10379] gi|241864533|gb|EER68909.1| DNA mismatch repair protein MutL [Gemella haemolysans ATCC 10379] Length = 707 Score = 321 bits (823), Expect = 2e-85, Method: Composition-based stats. Identities = 114/335 (34%), Positives = 185/335 (55%), Gaps = 6/335 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI LS ++ N+IAAGE++ERPS +KEL+ENS+DA S+ ++ +I G +I DNG Sbjct: 3 KINILSAELSNKIAAGEVVERPSSVVKELVENSIDAGSTNIKVIIKEFGIQQIRIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++++++ A RH TSKIS D +I T GFRGEAL SI +VS +T+ S G Sbjct: 63 GISNDDLARAFLRHATSKISADYDLFHIETLGFRGEALASISSVSKVTIKSC-AGEAQGK 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ S A GT + V +LF+ PARL +L++ E IT++I + A++Y Sbjct: 122 ILVLEGGKVVSEEYYAPIKGTDLSVENLFYNTPARLKYLRNPHTEQANITNIIHKFALSY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F +K +G+ + +S++ N +E + +++ + GY + Sbjct: 182 PNVAFELHVDGKITFKTY---GDGDVHKILSKIYNMGVARNMIEFSGNNDDYKVFGYISV 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +FINGR +++ I + I AY + + RYP+ V+ +E+DP +DVNV Sbjct: 239 PEETRASKNYINIFINGRYIKNYGIQNAIIDAYGTLLMINRYPLCVINIEMDPILLDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 HP K +R + I + I + ++ Sbjct: 299 HPTKQEVRLSKEAELIRLIKEVIAERLSNYTYIPQ 333 Score = 184 bits (467), Expect = 4e-44, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 110/198 (55%), Gaps = 2/198 (1%) Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 ++++ AQI + YI+S+ + L ++DQHAA ER +EK++++F K + Sbjct: 510 DDTKVRTLPDLKVLAQIFKTYILSEADNKLFLIDQHAAAERYNYEKLQREFIERKNYKKQ 569 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 +L P + D E A + + E LGI E FG N+ +RE P + +++ Q+++ I Sbjct: 570 MLIPLMFDFSVEEAAEVRNNLEKFEELGIVFEEFGDNSYVVREFPGWI-EEDEEQMIKII 628 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 +++++ + T + + +A +C SI++ + + +EMN+++ ++ + N C HG Sbjct: 629 VEKVLRKNNI-TFNELRNDAIAMASCKMSIKANQVLTDVEMNKVISDLYECKNPFTCPHG 687 Query: 577 RPTFIKLKLSDIEKLFGR 594 RP K++ D+EK+F R Sbjct: 688 RPIITKMEKKDLEKMFKR 705 >gi|327275079|ref|XP_003222301.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Anolis carolinensis] Length = 746 Score = 321 bits (823), Expect = 2e-85, Method: Composition-based stats. Identities = 124/423 (29%), Positives = 197/423 (46%), Gaps = 21/423 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE++EN LDA+++ ++ + GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMVENCLDAKATSIQVTVKDGGLKLIQIQDNGCG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ S+ + Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITSKTADGKCAYR 127 Query: 121 IAISGEKISS-VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 S K+ S +P A N GT + V DLF+ + R LK+ E I DV+ R AI Sbjct: 128 ANYSDGKLKSAPKPCAGNQGTQITVEDLFYNVTTRRKALKNPSEEYAKILDVVSRYAIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN--EITLQGYT 237 VSF+ + S NG + I V G +E+ + ++GY Sbjct: 188 SGVSFSVKKQGETVADVRTLS-NGTTVDNIRSVFGNAVSRELIEVGCEDTALAFKMKGYV 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + + LEI P+ VDV Sbjct: 247 TNANYSVKKCTFL-LFINHRLVESSALRKAIETVYAAYLPKNTHPFLYISLEITPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFI--------------IQSIQKAINKKGISTSSVLSKKMIS 343 NVHP K + F + I + + + +S+ + K S Sbjct: 306 NVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQTLLPGATVSSTDVVKTTNS 365 Query: 344 SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 S Q T + + FLQ ST L + + N +E++ Sbjct: 366 SVGQGGDKVYAHQMVRTDSRDQKLDAFLQPLNKSTTPGLAEEPESDVPKNTRCKETQLQD 425 Query: 404 YQL 406 +++ Sbjct: 426 FEM 428 >gi|168180372|ref|ZP_02615036.1| DNA mismatch repair protein [Clostridium botulinum NCTC 2916] gi|226949040|ref|YP_002804131.1| DNA mismatch repair protein [Clostridium botulinum A2 str. Kyoto] gi|254766164|sp|C1FNT8|MUTL_CLOBJ RecName: Full=DNA mismatch repair protein mutL gi|182668696|gb|EDT80674.1| DNA mismatch repair protein [Clostridium botulinum NCTC 2916] gi|226840747|gb|ACO83413.1| DNA mismatch repair protein MutL [Clostridium botulinum A2 str. Kyoto] Length = 666 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 119/341 (34%), Positives = 184/341 (53%), Gaps = 5/341 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + N+IAAGE+IERP +KEL+ENS+DA + + I GG++ +I D+G Sbjct: 3 KINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQNLIKIIDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +I A H TSKI+ +D I T GFRGEAL SI +VS L SR N G Sbjct: 63 GIYPIDIKNAFLPHATSKINSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNFGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G KI ++ N GT +EV DLF+ +PARL FLKS + +++ I+D++ R +A+ Sbjct: 123 EIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKFLKSARSDSSSISDIVNRFILAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF K GN + I V + N + + I++ G+ G Sbjct: 183 PDISFNLINKGKQSIK---SYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +R + +F+N R V+ KFI + + A+ + + YP V+ ++I P +DVNV Sbjct: 240 PEISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK 340 HP KS ++F++ + I ++ +AI + + + K Sbjct: 300 HPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFTNFFNK 340 Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats. Identities = 71/224 (31%), Positives = 113/224 (50%), Gaps = 1/224 (0%) Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 LQ++ + + L ++ T S + E Y Q + YI+ + L I+D Sbjct: 442 LQKDNKNLDALYLNEHNTNSSPINIKENKPNNFYVDMKIIGQFNNTYILIEKDKELYIID 501 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAAHE+++FEK + + + SQ LL+P +I+L E E + E+ + G E F Sbjct: 502 QHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKNSGFSVETF 561 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 G I I+E+P IL K N+ L DI+ + + + T + I AT+AC ++++ Sbjct: 562 GECTINIKEVPLILGKPNVEDLFMDILYNLKNMKSKETSTIKYNAI-ATLACKSAVKAND 620 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ E+ +L+ M N C HGRPT IK L D+EK F R Sbjct: 621 NLKEEEIKKLIENMLTLNNPYTCPHGRPTMIKFTLKDLEKKFKR 664 >gi|322371529|ref|ZP_08046075.1| DNA mismatch repair protein MutL [Haladaptatus paucihalophilus DX253] gi|320548820|gb|EFW90488.1| DNA mismatch repair protein MutL [Haladaptatus paucihalophilus DX253] Length = 734 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 120/382 (31%), Positives = 191/382 (50%), Gaps = 8/382 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR LSE I +IAAGE++ERP+ +KEL+ENSLDA++SR+ + GGG +TD+G G Sbjct: 8 IRALSETTIQRIAAGEVVERPASVVKELVENSLDADASRISVRVDGGGTERIAVTDDGIG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 M+ E++ +AV+ H TSKI DD + + T GFRGEAL +IGAVS + ++P +G Sbjct: 68 MSREDVQIAVEEHTTSKIRDIDDLESGVATLGFRGEALYTIGAVSRTKIRTKPRGGESGT 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G + V P GT VEV DLFF PAR +LK++ E + V+ + A+A Sbjct: 128 ELRLVGGDVEGVGPAGCPEGTTVEVEDLFFNTPARRKYLKTDSTEFAHVNRVVTQYALAN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F+ + + GN I V G + + ++ + + GY Sbjct: 188 PDVAFSLEHDGREVF---STTGRGNLQSTILSVYGREVATAMIAVDG-GDAVDASGYVSH 243 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R ++NGR V+ + I AY + RYP VL L++ VDVNV Sbjct: 244 PETTRSTREYVATYVNGRYVRSSVVREAILDAYGNQLAPDRYPFAVLFLDVPADSVDVNV 303 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RF + ++ + ++Q A+ G+ +S + D P+ + Sbjct: 304 HPRKMEVRFGDEARVKTAVRDAVQDALLDNGLVRASAPRGRSAPD-ETDVTPEPVQSELG 362 Query: 360 TSLTNTQEKLFLQENRLSTNDL 381 + ++ + + + Sbjct: 363 DGDSAGRKNASGETADSNAAES 384 Score = 168 bits (425), Expect = 3e-39, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 113/238 (47%), Gaps = 3/238 (1%) Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 + +T + E + S + T E +E+ Q+H Y+ Sbjct: 487 SAGTGSTTDAARDPERKFSAPTATTTLPETGGEGAKEADEASFERLPSMRILGQLHDTYV 546 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +++T DGLV++DQHAA ER+ +E++ + F T+Q L + ++L E AL ++ E Sbjct: 547 VAETDDGLVLIDQHAADERVNYERLCRQFAGDT-TTQVLASSVELELTAAEAALFDDYRE 605 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII--DSSTTYTLQDRIENI 536 L RLG A + + +PA+ K P LLRD++ E I +S + + + + Sbjct: 606 ALARLGFHAALVDDRTVEVTTVPAVFEKTLSPDLLRDVLSEFISVESGGANSAEAVADEL 665 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ +ACY SI ++ ++ LL +++ N C HGRP I+ +IE F R Sbjct: 666 ISDLACYPSITGNTSLREGDVVSLLAALDECENPYACPHGRPVVIEFNREEIEDRFER 723 >gi|329767739|ref|ZP_08259255.1| hypothetical protein HMPREF0428_00952 [Gemella haemolysans M341] gi|328838840|gb|EGF88434.1| hypothetical protein HMPREF0428_00952 [Gemella haemolysans M341] Length = 707 Score = 320 bits (821), Expect = 3e-85, Method: Composition-based stats. Identities = 113/335 (33%), Positives = 184/335 (54%), Gaps = 6/335 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI LS ++ N+IAAGE++ERPS +KEL+ENS+DA S+ ++ +I G +I DNG Sbjct: 3 KINILSAELSNKIAAGEVVERPSSVVKELVENSIDAGSTNIKVIIKEFGIQQIRIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++++++ A RH TSKIS D +I T GFRGEAL SI +VS + + S G Sbjct: 63 GISNDDLARAFLRHATSKISADYDLFHIETLGFRGEALASISSVSKVVIKSC-AGEAQGK 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ S A GT + V +LF+ PARL +L++ E IT++I + A++Y Sbjct: 122 MLVLEGGKVVSEEYYAPIKGTDLSVENLFYNTPARLKYLRNPHTEQANITNIIHKFALSY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F +K +G+ + +S++ N +E + +++ + GY + Sbjct: 182 PNVAFELHVDGKITFKTY---GDGDVHKILSKIYNMGVARNMIEFSGSNDDYKVFGYISV 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N +FINGR +++ I + I AY + + RYP+ V+ +E+DP +DVNV Sbjct: 239 PEETRASKNYINIFINGRYIKNYGIQNAIIDAYGTLLMINRYPLCVINIEMDPILLDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 HP K +R + I + I + ++ Sbjct: 299 HPTKQEVRLSKEAELIRLIKEVIAERLSNYTYIPQ 333 Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 111/198 (56%), Gaps = 2/198 (1%) Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 ++++ AQI + YI+S+ + L ++DQHAA ER +EK++++F K + Sbjct: 510 DDTKVRTLPDLKVLAQIFKTYILSEADNKLFLIDQHAAAERYNYEKLQREFIERKNYKKQ 569 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 +L P + D E A + + E LGI E FG N+ +RE P + +++ Q+++ I Sbjct: 570 MLIPLMFDFSVDEAAEVRNNLEKFEELGIVFEEFGDNSYVVREFPGWI-EEDEEQMIKII 628 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 +++++ ++ T + + +A +C SI++ + + +EMN+++ ++ + N C HG Sbjct: 629 VEKVLKNNNI-TFNELRNDAIAMASCKMSIKANQVLTDVEMNKVISDLYECKNPFTCPHG 687 Query: 577 RPTFIKLKLSDIEKLFGR 594 RP K++ D+EK+F R Sbjct: 688 RPIITKMEKKDLEKMFKR 705 >gi|257386447|ref|YP_003176220.1| DNA mismatch repair protein MutL [Halomicrobium mukohataei DSM 12286] gi|257168754|gb|ACV46513.1| DNA mismatch repair protein MutL [Halomicrobium mukohataei DSM 12286] Length = 709 Score = 320 bits (821), Expect = 3e-85, Method: Composition-based stats. Identities = 124/397 (31%), Positives = 201/397 (50%), Gaps = 12/397 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + +IAAGE++ERP+ +KEL+EN+LDA++ RV + GG ++TD+G G Sbjct: 9 IRRLDSATVERIAAGEVVERPASVVKELVENALDADADRVSVAVEQGGIEGIKVTDDGIG 68 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQNNT-G 118 M+ E + AV+ H TSKIS +D + T GFRGEAL +IGAVS T+ +RP G Sbjct: 69 MSREAVERAVEEHTTSKISSIEDLERGVGTLGFRGEALHAIGAVSRTTITTRPRGREHQG 128 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ + G +++V P GT +EV DLF+ +PAR +LK E + V+ A+A Sbjct: 129 TELVVEGGDVTAVEPAGCPAGTTIEVDDLFYNVPARRKYLKQTSTEFAHVNTVVTSYALA 188 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN----EKSNEITLQ 234 P V+ T S + + G+ + V G D + +E++ ++ Sbjct: 189 NPDVAVTLSHDGRETF---ATTGQGDLEATVLSVYGRDVAQSMIEVDDGDLPDGPLESVT 245 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G P NR + + ++NGR V+ + I AY + RYP VL +DP Sbjct: 246 GLVSHPETNRASRDYLSTYVNGRYVRADAVREAIVDAYDTQLAPDRYPFAVLFCAVDPAT 305 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHP K +RF + +R + ++Q A+ +G+ SS + ++ + AP++ Sbjct: 306 VDVNVHPRKMEVRFADDEGVRRQVEHAVQSALLSEGLVRSSAPRGRS-AAEQTEIAPESG 364 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 T T +E+ +++ + D S+ Sbjct: 365 RVDDETDATGAREEADGEQSDGDSAGEARRRDTPVSD 401 Score = 170 bits (430), Expect = 8e-40, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 115/240 (47%), Gaps = 3/240 (1%) Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 ++ T+ ++ + R + + D + Q+H+ Sbjct: 461 SAQSTRTDDADRGRARTGRDADPERKFRGDDRQARLGGEEPGQSLDSLPALRILGQLHET 520 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Y++++ DGLV++DQHAA ER+ +E+++ F + T+Q L P ++L GE A+ + Sbjct: 521 YVVAEADDGLVVIDQHAADERINYERLKDAF-EGETTTQALAEPVELELTAGEAAVFEDR 579 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII--DSSTTYTLQDRIE 534 E L RLG A+R G + +R +P +++ P+L++D++ + + T++ + Sbjct: 580 VEALARLGFHADRTGDRTVEVRTVPGVIADAAGPELVQDVLAAFVAGEHEAADTVEAAAD 639 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +LA +ACY SI + + LL ++ N C HGRP +++ ++E F R Sbjct: 640 ELLADLACYPSITGNTSLTEGSIRELLAALDDCENPYACPHGRPVVVEIDRGELEDRFER 699 >gi|57238946|ref|YP_180082.1| DNA mismatch repair protein [Ehrlichia ruminantium str. Welgevonden] gi|58578879|ref|YP_197091.1| DNA mismatch repair protein MutL [Ehrlichia ruminantium str. Welgevonden] gi|57161025|emb|CAH57931.1| DNA mismatch repair protein MutL [Ehrlichia ruminantium str. Welgevonden] gi|58417505|emb|CAI26709.1| DNA mismatch repair protein MutL [Ehrlichia ruminantium str. Welgevonden] Length = 689 Score = 320 bits (821), Expect = 3e-85, Method: Composition-based stats. Identities = 132/399 (33%), Positives = 216/399 (54%), Gaps = 4/399 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + IN+IAAGE+IE P+ +KEL+ENS+DA+++ V I GG++ + D+G Sbjct: 1 MSIVLLDSRTINRIAAGEVIECPASVVKELVENSIDAKATTVSITIERGGRNLILVCDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A RH TSK+ D D + + + GFRGE L SI AVS + ++SR ++T Sbjct: 61 IGIKKEDMEIAFVRHATSKLPDGDLTKVKSLGFRGEGLTSIAAVSKVKMVSRCQGSDTAW 120 Query: 120 QIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I I GEK+ + P ++ GT +EVRDLFF P RL FLK+E+ E I D++ ++A+ Sbjct: 121 SIEIEGGEKVQELIPNPLSCGTYIEVRDLFFATPNRLKFLKTEKAEVQSIIDMVNKLAMV 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + F+ +K Q + + I ++G F N++ ++ + I L GY G Sbjct: 181 NHDIKFSLCVDGKQVFKYLKQQSEIDRLAEIK-ILGTGFYENSLPVHFVESMIALTGYIG 239 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 IPT +RG ++ Y F+NGR + D ++ +R AY++ I +YP+VVL + + QVD N Sbjct: 240 IPTMSRGKSSLIYTFVNGRPIYDNMLVGAVRYAYSDFIERDKYPIVVLYINMPYDQVDTN 299 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK-THLPK 357 VHP KS +RF++ +I ++ +I+ A+ K + + F +DN K +L Sbjct: 300 VHPNKSEVRFQDKRLIYKVVVNAIKNALAVKMNNKFRSDNNFSEDPFEKDNIAKVKNLGV 359 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 + S Q ++ + D + + Sbjct: 360 NSPSFQFVAPSSHEQSSKDNKEQYSCISDFGIPNSDKQL 398 Score = 180 bits (456), Expect = 7e-43, Method: Composition-based stats. Identities = 94/218 (43%), Positives = 134/218 (61%), Gaps = 1/218 (0%) Query: 378 TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 +D S + + E + Y LG A Q+H YI++QT DG+VIVDQHAAHER Sbjct: 471 EHDTHLSLNAVPKSISHKQENTLVDCYPLGYAICQVHSRYIVAQTKDGIVIVDQHAAHER 530 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEG-ECALIMEHDEDLHRLGIKAERFGPNAIA 496 LI+E M+Q + Q LL PE++++ G + L+ME+ L +LG+ E G ++ Sbjct: 531 LIYEYMKQVMEKEGVKRQILLIPEVVEMNNGCDLELLMEYKNKLLKLGLLIESLGDLSVI 590 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +RE+PA+ ++ L+ I+D I + T L ++I++I T+ACY SIRSGRK++ E Sbjct: 591 VREVPAVFGSFDVKALIFHILDSIAEVGDTLFLNNKIKDICGTIACYSSIRSGRKLKIEE 650 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MN LLR ME S QCNHGRPT+IKL L +I+KLF R Sbjct: 651 MNALLRNMENTSYSGQCNHGRPTYIKLSLLEIDKLFLR 688 >gi|312213872|emb|CBX93874.1| similar to DNA mismatch repair protein [Leptosphaeria maculans] Length = 774 Score = 320 bits (821), Expect = 4e-85, Method: Composition-based stats. Identities = 144/571 (25%), Positives = 241/571 (42%), Gaps = 43/571 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LS+ ++N+IAAGEII P A+KELIEN++DA S+ +E ++ GG QITDNG Sbjct: 57 RIKPLSQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSIEVLVKDGGLKLLQITDNGH 116 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +R TSK+ +D ++I T+GFRGEAL SI ++HL + +R +++ Sbjct: 117 GIDKEDLPILCERFTTSKLKQFEDLTSIGTYGFRGEALASISHIAHLKVTTRTKESSCAW 176 Query: 120 QIAISGEKIS--------SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + +G K++ +P A GT + V DLF+ +P+R +S E I D+ Sbjct: 177 EAMYAGGKLTSAKPGGSVEPKPKAGRMGTQITVEDLFYNVPSRRRAFRSASEEYAKILDL 236 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--SN 229 + R A+ V+F+ N + +RI Q+ G N VEL + Sbjct: 237 VGRYAVHCQGVAFSCKKAGENTGSSVAVAATATTRDRIRQIHGTAAANELVELEVEDKQW 296 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 +G+ ++ +FIN R+V+ I ++ YA +P G +P L LE Sbjct: 297 GFKCRGWVSNANYS-AKRTHMLLFINHRSVESPAIKKSVEQTYAMFLPKGGHPFFYLSLE 355 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P++VDVNVHP K + F N I + I+ ++K S S S Sbjct: 356 IEPQRVDVNVHPTKREVHFLNEDEIIATVCDEIRSGLSKVDTSRS----FMTQSLLSNPK 411 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 P K + T LST + E+N ++ A + Sbjct: 412 VPFATPMKPTQPPSTTPTTTGDNTPDLSTAKTPRTTMMRPKENNLVRTDASARKITSMLQ 471 Query: 410 CAQIHQNYIISQ-----TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 ++ + + + + ++R ++ + T I Sbjct: 472 LQHSVEDTAEEEVEIDDEHTEKEPIPCRLTSIKRLRAEVRDAMHNELTDIISTHTFVGIV 531 Query: 465 LLEGECALIME------------HDEDLHRLGI-KAERFGPNAIAIREIPAI----LSKK 507 + A I +E ++LG+ FG IR P + L K Sbjct: 532 DEQKRIAAIQAGVKLFLVDYGLLCNEFFYQLGLSDFANFGS----IRFHPPLALRDLLKL 587 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 + Q R DE+ +++ + A Sbjct: 588 AVEQEQRRCADEVDWQDVVDSVESLLVEKAA 618 >gi|319944426|ref|ZP_08018700.1| DNA mismatch repair protein MutL [Lautropia mirabilis ATCC 51599] gi|319742387|gb|EFV94800.1| DNA mismatch repair protein MutL [Lautropia mirabilis ATCC 51599] Length = 753 Score = 320 bits (820), Expect = 4e-85, Method: Composition-based stats. Identities = 125/329 (37%), Positives = 187/329 (56%), Gaps = 9/329 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L + +I+QIAAGE+IERP+ AIKEL+EN+LDA +S++E I GG Q+ DNG Sbjct: 21 PIALLPDVLISQIAAGEVIERPASAIKELLENALDAGASQIEIRIEEGGLRRLQVIDNGR 80 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+A+ RH TSKI+ D ++ + GFRGEAL S+ AVS LTL SRP G Sbjct: 81 GIEKDQLPLALARHATSKIASLADLEHVTSLGFRGEALASMAAVSRLTLASRPLAAEHGW 140 Query: 120 Q-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + G+ P A+ PGT++EV DLF PAR FLKS E D IRR+A++ Sbjct: 141 KVDVQPGQAAPPPEPAAIAPGTVIEVIDLFSATPARRKFLKSPATEAAYCLDAIRRIALS 200 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +P V F + + + + ++ ++ + ++G G Sbjct: 201 HPAVQFVVHQDGREVRRWPATTPAQRIENLVGDG------ARLLPVSAQAGPLAVEGLLG 254 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P R +++ Y+F+NGR V+D+ + IR A+ + + RYPV L L IDP VD N Sbjct: 255 EPDAARARSDRQYLFVNGRFVRDRMLAQAIRQAFRDRLHGERYPVFALFLTIDPTLVDAN 314 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 VHPAK+ +RFR+P +R+ + +I+ A+ Sbjct: 315 VHPAKTEVRFRDPGAVRHLVFHAIENALA 343 Score = 203 bits (516), Expect = 7e-50, Method: Composition-based stats. Identities = 78/194 (40%), Positives = 123/194 (63%) Query: 401 ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 A ++G A AQ+H YI+SQT DGL+IVD HAAHER++ E++++ +I Q LL P Sbjct: 558 AHTPRMGFALAQLHGIYILSQTADGLIIVDMHAAHERIVLERLKKAHRDHRIARQPLLIP 617 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 + E + A + + + L LGI E GP+ +A+ +PA+LS+ N +L R+++ Sbjct: 618 AVFQATELDVATVTDDADSLGDLGIDLEVRGPDTLAVTSVPALLSRANPEKLAREVLAAW 677 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + L+ R++ +LATMAC+GS+R+ R + EMN LLR+ME P++ CNHGRPT+ Sbjct: 678 QAPAQHNALEKRLDRLLATMACHGSVRANRALTLPEMNALLRDMEATPDADFCNHGRPTW 737 Query: 581 IKLKLSDIEKLFGR 594 +L L ++++ F R Sbjct: 738 FRLTLEELDRWFMR 751 >gi|326316136|ref|YP_004233808.1| DNA mismatch repair protein MutL [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372972|gb|ADX45241.1| DNA mismatch repair protein MutL [Acidovorax avenae subsp. avenae ATCC 19860] Length = 698 Score = 320 bits (820), Expect = 4e-85, Method: Composition-based stats. Identities = 118/340 (34%), Positives = 192/340 (56%), Gaps = 20/340 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ A++EL++N+LDA + +V + GG + D+G Sbjct: 11 PIRDLPDELISQIAAGEVVERPASAVRELVDNALDAGARQVTVRLLAGGVRLIAVEDDGC 70 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+P+A++RH TSKI++ D ++ T GFRGEAL +I +VS + L+SR + T Sbjct: 71 GIPPEELPVALRRHATSKITNLHDLESVATMGFRGEALAAIASVSEMALLSRTEEQPTAF 130 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ RP A + GT VEV++LFF+ PAR FLK++ E + +RR A+A Sbjct: 131 LLDARSGEL---RPAARSRGTTVEVKELFFSTPARRKFLKTDATELAHCIEAVRRHALAR 187 Query: 180 PKVSFTFSTIKSNRYKMNFQ---------------STNGNFPERISQVIGEDFINNAVEL 224 P V F + + R+S V+GEDF+ ++ + Sbjct: 188 PDVGFAIWHEGKLVEQWRATLAAPAASADGAVDDAALEDALARRLSDVLGEDFLAESIAV 247 Query: 225 NEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 +S +T+ G G+P R A+Q + ++NGR V+DK + R+AY + + + PV Sbjct: 248 RHRSGPVTVTGRAGLPDAARSRADQQFCYVNGRFVRDKVLTHAARSAYEDVLHGQKQPVY 307 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQK 324 L + IDP +VDVNVHP K +RFR+ + + +++ Sbjct: 308 ALYVAIDPMRVDVNVHPTKIEVRFRDSREVHQAVRHAVEN 347 Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 92/327 (28%), Positives = 146/327 (44%), Gaps = 20/327 (6%) Query: 269 RTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 R A + V L + + + P + F P+ + Sbjct: 389 RQAAMHFDARPGHRVTDLEALWGRKDITPSARPDGTAAAFAQPSGPHAPL------PFAP 442 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 +T++V + P T +P F E+ S P+ D Sbjct: 443 VTGATATVQEAPAAYAMATGGLPATGMPAVPQEGAPDGAGTFAAESGASAQAEAPAGD-- 500 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFN 448 E + LG A AQIH Y++++ G+VIVD HAAHER+++E+++ + Sbjct: 501 -----------EPEVWPLGRAVAQIHGVYVLAENAQGMVIVDMHAAHERIVYERLKSQVD 549 Query: 449 -STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 S +I SQ LL P E A H L LG++ F P +A+R +P L++ Sbjct: 550 ASERIASQPLLIPATFAATPEEVATAEAHAGTLDMLGLEVSPFSPRTLAVRAVPTSLAQG 609 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 + +L R ++ E+ T +Q IL TMAC+G++R+ R++ EMN LLR+ME Sbjct: 610 DAVELARSVLAELAAHDATTVVQRARNEILGTMACHGAVRAHRRLTLDEMNALLRQMEVT 669 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ +L + +++ LF R Sbjct: 670 ERSDQCNHGRPTWRQLSMRELDALFLR 696 >gi|116749352|ref|YP_846039.1| DNA mismatch repair protein MutL [Syntrophobacter fumaroxidans MPOB] gi|254766182|sp|A0LJK2|MUTL_SYNFM RecName: Full=DNA mismatch repair protein mutL gi|116698416|gb|ABK17604.1| DNA mismatch repair protein MutL [Syntrophobacter fumaroxidans MPOB] Length = 670 Score = 320 bits (819), Expect = 5e-85, Method: Composition-based stats. Identities = 135/395 (34%), Positives = 205/395 (51%), Gaps = 11/395 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + + NQIAAGE++ERP+ KEL+ENS+DA + R+ IA GG+ ++ DNG Sbjct: 3 RITILPDILCNQIAAGEVVERPAAVAKELLENSIDAGARRISLSIADGGRKEIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ +A++RH TSKI +D I + GFRGEALPSI AVS L++R P G Sbjct: 63 GMHPDDALLALERHATSKIRSIEDLQAIGSLGFRGEALPSIAAVSRFELVTREPDAVAGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + G + VR GT + VRDLF+ +PAR FL++ ET I D +R+A+A+ Sbjct: 123 FIRVEGGVVREVRETGSPAGTRITVRDLFYNVPARRKFLRAADTETAYICDQFQRLAMAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V F + +Y + ER QV+G + + A+ ++ L+G G Sbjct: 183 HAVHFQLINRERTQYDF---PGAASPEERAGQVLGAETLKRAIPFCVENASARLRGMVGT 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R N++ +VF+NGR V D+ + I A+ IP G++PV VL LE+DP VDVNV Sbjct: 240 PDLQRANSHSLFVFVNGRPVWDRAVNRAILAAFESLIPRGKFPVAVLFLELDPLHVDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +RF++P + + + +I+ A+ ++ + + + Sbjct: 300 HPTKREVRFKHPGGVIDTVRGAIRDALCHLR------PLHGSAAAAPRPFSETADQRAFR 353 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 SL + F + LS PS+ D Sbjct: 354 DSLVREGQLSFDRGRPLSRPPGFPSERWRERHRPD 388 Score = 167 bits (424), Expect = 3e-39, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 122/262 (46%), Gaps = 5/262 (1%) Query: 335 SVLSKKMISSFHQDNAPKTHLPK--YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 S + S F + AP+ P + ++ + +D E Sbjct: 411 SPPAAPADSLFDEGAAPQPDNPDTDFFAEPKRAAGGPASTHAPVTVDTAAFADAFQAFEA 470 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + + Q+ YI+ + DGL+++DQHAAHER+IF+ + F + Sbjct: 471 ATHLHAGDVPALAELPVIGQLANTYILLEAPDGLILIDQHAAHERIIFDAL--SFPAGGP 528 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 Q L+ P +IDL + A++ L +G++ E FG ++ + +PA L + L Sbjct: 529 ARQRLIRPAVIDLPPRDAAMLRRWLPLLEEIGVEIESFGGDSFVVHAVPAPLGECPPEGL 588 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 +R+++ I+ + + + T AC+ ++R+G++++ E+ LL +++ +S Sbjct: 589 VRELLASAIE-GDDAPRWNVLGRLAKTAACHRAVRAGQRLRPEEIRLLLEGLDRTRFAST 647 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGRP + K+ LSD+ +LF R Sbjct: 648 CPHGRPVWYKMTLSDVARLFQR 669 >gi|261367033|ref|ZP_05979916.1| DNA mismatch repair protein MutL [Subdoligranulum variabile DSM 15176] gi|282571151|gb|EFB76686.1| DNA mismatch repair protein MutL [Subdoligranulum variabile DSM 15176] Length = 687 Score = 320 bits (819), Expect = 5e-85, Method: Composition-based stats. Identities = 111/368 (30%), Positives = 192/368 (52%), Gaps = 5/368 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + IAAGE++ERP+ KEL+EN++DA ++++ GG + QI DNG G Sbjct: 4 IRVLDKHTAELIAAGEVVERPASVAKELLENAIDAGATQITLSATRGGIAQLQIVDNGSG 63 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E I A RH TSKI ++D ++IHT GFRGEAL SI +V+ + +++R Q+ Sbjct: 64 IEAEYIDKAFIRHATSKIASAEDLNHIHTLGFRGEALASIASVAKVEVLTRTEQDEYACC 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I+G + P A GT + V +LF+ PAR+ FLK + E + + + A+++P Sbjct: 124 YRIAGGEPQGTEPGARPVGTTITVNELFYNTPARMKFLKKDASEGTYVAETVLHAALSHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF F ++ +G + V+G +F + + ++ + + G P Sbjct: 184 EISFRFIREGKQQFM---TPGDGELRSAVYAVMGREFARDLLPVDGGNGVYRITGLITPP 240 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + F+NGR V+++ +++ + AY T+ G++P VL+LE+ VDVNVH Sbjct: 241 RACRASRGTQHFFVNGRYVKNRTMMAALENAYKGTMMQGKFPGAVLMLEMPADLVDVNVH 300 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK+ IRF + + + + ++++ A+ G S+ + K + Sbjct: 301 PAKTEIRFARESDVFDAVYRAVRTALTTPGSGECRFEMSHDTSAQKAEVPAKQPSSQGTP 360 Query: 361 SLTNTQEK 368 + EK Sbjct: 361 AHPQVPEK 368 Score = 161 bits (408), Expect = 3e-37, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 107/190 (56%), Gaps = 3/190 (1%) Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 Q ++ + YII++ L ++D+HAAHER++FEK+ +D+ + + +Q LL P ++ Sbjct: 499 QPLRLVGEVFKTYIITEREGELCLIDKHAAHERILFEKLAKDYGN--VPAQMLLVPVQVN 556 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L E ++++ E L+ G++ E FG + + +R +PA + ++ ++ ++ +D Sbjct: 557 LTAAEKQALLQNSEMLNDAGLEVEDFGGSTVMVRAVPADVQVDDVEDMVVELASRFVD-G 615 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 + L+++ E +L ++AC +I++G + EM L + + C HGRP +K+ Sbjct: 616 SRDALREKTEWVLHSIACRAAIKAGDRTSDAEMLVLAQNILDGSIPPFCPHGRPCVLKIT 675 Query: 585 LSDIEKLFGR 594 ++EK FGR Sbjct: 676 RKELEKQFGR 685 >gi|329770225|ref|ZP_08261615.1| hypothetical protein HMPREF0433_01379 [Gemella sanguinis M325] gi|328837031|gb|EGF86675.1| hypothetical protein HMPREF0433_01379 [Gemella sanguinis M325] Length = 686 Score = 319 bits (818), Expect = 6e-85, Method: Composition-based stats. Identities = 126/409 (30%), Positives = 215/409 (52%), Gaps = 9/409 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI LS ++ N+IAAGE++ERPS +KEL+ENS+DA S+ ++ +I G +I DNG Sbjct: 3 KINILSAELSNKIAAGEVVERPSSVVKELVENSIDAGSTNIKIIIQEFGIKQIRIIDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++++++ A RH TSKIS D +I T GFRGEAL SI +VS +T+ S G Sbjct: 63 GISNDDLERAFLRHATSKISADYDLFHIETLGFRGEALASISSVSKVTIKSC-SGEVQGK 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + G K+ A GT + V +LF+ PARL +L++ E IT+VI + A++Y Sbjct: 122 MLILEGGKVVQSEFYAPIKGTDLSVENLFYNTPARLKYLRNPHTEQANITNVIHKFALSY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF +K +G+ + +S++ N ++ + +++ + G+ + Sbjct: 182 PNISFELHVDGKITFKTY---GDGDVHKILSKIYNMSVAKNMIDFSGSNDDYKVYGFISV 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R + N ++FINGR +++ I ++I AY + RYP+ V+ +E+DP +DVNV Sbjct: 239 PEETRASKNYIHIFINGRYIKNYVIQNSIIDAYGTLLMKNRYPLCVINIEMDPILLDVNV 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST---SSVLSKKMISSFHQDNAPKTHLP 356 HP K +R + I + I + ++ ++VL+KK S + + Sbjct: 299 HPTKQEVRLSKEAELIRLIKEIIAERLSNYTYIPQGMNNVLTKKEKSRIEKLDFLSELDT 358 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 K+ K L++ ++ +D + +D SE+N V + + Sbjct: 359 KFGIEEDADISKKQLEDKIINEDDFIFGEDNLSSENNISVNDKNENNDN 407 Score = 184 bits (468), Expect = 3e-44, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 112/198 (56%), Gaps = 2/198 (1%) Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 +E++ AQI + YI+S+ + L ++DQHAA ER +EK++++F+ K + Sbjct: 489 DETKVRTLPDLKVLAQIFKTYILSEADNKLYLIDQHAAAERYNYEKLQREFSERKNYKKQ 548 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 +L P + D E A + + E LGI E FG N+ +RE P + +++ ++++ I Sbjct: 549 MLIPLMFDFSVEEAAEVRNNLEKFEELGIVFEEFGDNSYVVREFPGWI-EEDEEEMIKII 607 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 +++++ ++ T + + +A +C SI++ + + +EMN+++ ++ + N C HG Sbjct: 608 VEKVLKNNNI-TFNELRNDAIAMASCKMSIKANQILNEVEMNKVISDLYECKNPFTCPHG 666 Query: 577 RPTFIKLKLSDIEKLFGR 594 RP K++ D+EK+F R Sbjct: 667 RPIITKMEKKDLEKMFKR 684 >gi|58616937|ref|YP_196136.1| DNA mismatch repair protein MutL [Ehrlichia ruminantium str. Gardel] gi|58416549|emb|CAI27662.1| DNA mismatch repair protein MutL [Ehrlichia ruminantium str. Gardel] Length = 689 Score = 319 bits (818), Expect = 6e-85, Method: Composition-based stats. Identities = 132/390 (33%), Positives = 218/390 (55%), Gaps = 8/390 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + IN+IAAGE+IE P+ +KEL+ENS+DA+++ + I GG++ + D+G Sbjct: 1 MSIVLLDSRTINRIAAGEVIECPASVVKELVENSIDAKATTINITIERGGRNLILVCDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A RH TSK+ D D + + + GFRGE L SI AVS + ++SR ++T Sbjct: 61 IGIKKEDMEIAFVRHATSKLPDGDLTKVKSLGFRGEGLTSIAAVSKVKMVSRCQGSDTAW 120 Query: 120 QIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I I GEK+ + P ++ GT +EVRDLFF P RL FLK+E+ E I D++ ++A+ Sbjct: 121 SIEIEGGEKVQELIPNPLSCGTYIEVRDLFFATPNRLKFLKTEKAEVQSIIDMVNKLAMV 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + F+ +K Q + + I ++G F N++ ++ + ITL GY G Sbjct: 181 NHDIKFSLCIDSKQVFKYLKQQSEIDRLAEIK-ILGTGFYENSLPVHFVESMITLTGYVG 239 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 IPT +RG ++ Y F+NGR + D ++ +R AY++ I +YP+VVL + + QVD N Sbjct: 240 IPTLSRGKSSLIYTFVNGRPIYDNMLVGAVRYAYSDFIERDKYPIVVLYINMPYDQVDTN 299 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP KS +RF++ +I ++ +I+ A+ K + + ++F D K ++ K Sbjct: 300 VHPNKSEVRFQDKRLIYKVVVNAIKNALAVKMNN-----KFRSDNNFSDDPFEKDNIAKV 354 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 S N+ FL + + + + Sbjct: 355 KNSSVNSPSFQFLVPSSHEQSSENNKEQYS 384 Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 95/218 (43%), Positives = 134/218 (61%), Gaps = 1/218 (0%) Query: 378 TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 +D+ S + E + Y LG A Q+H YII+QT DG+VIVDQHAAHER Sbjct: 471 EHDIHLSLNAVPKSIGHKQENTLVDCYPLGYAICQVHSRYIIAQTKDGIVIVDQHAAHER 530 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEG-ECALIMEHDEDLHRLGIKAERFGPNAIA 496 LI+E M+Q + Q LL PE++++ G + L+ME+ L +LG+ E G ++ Sbjct: 531 LIYEYMKQVMEKEGVKRQILLIPEVVEMNNGCDLELLMEYKNKLLKLGLLIESLGDLSVI 590 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 +RE+PA+ ++ L+ I+D I + T L ++I++I T+ACY SIRSGRK++ E Sbjct: 591 VREVPAVFGSFDVKALIFHILDSIAEVGDTLFLNNKIKDICGTIACYSSIRSGRKLKIEE 650 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MN LLR ME S QCNHGRPT+IKL L +I+KLF R Sbjct: 651 MNALLRNMENTSYSGQCNHGRPTYIKLSLLEIDKLFLR 688 >gi|170757624|ref|YP_001781347.1| DNA mismatch repair protein [Clostridium botulinum B1 str. Okra] gi|229890122|sp|B1IM67|MUTL_CLOBK RecName: Full=DNA mismatch repair protein mutL gi|169122836|gb|ACA46672.1| DNA mismatch repair protein MutL [Clostridium botulinum B1 str. Okra] Length = 666 Score = 319 bits (818), Expect = 8e-85, Method: Composition-based stats. Identities = 118/341 (34%), Positives = 182/341 (53%), Gaps = 5/341 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + N+IAAGE+IERP +KEL+ENS+DA + + I GG+ +I D+G Sbjct: 3 KINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +I A H TSKI+ +D I T GFRGEAL SI +VS L SR N G Sbjct: 63 GIYPIDIKNAFLPHATSKINSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNFGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G KI ++ N GT +EV DLF+ +PARL FLKS + +++ I+D++ R +A+ Sbjct: 123 EIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKFLKSARSDSSSISDIVNRFILAH 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P +SF K GN + I V + N + + I++ G+ G Sbjct: 183 PDISFNLINKGKQSIK---SYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGK 239 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 +R + +F+N R V+ KFI + + A+ + + YP V+ ++I P +DVNV Sbjct: 240 TEISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNV 299 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK 340 HP KS ++F++ + I ++ +AI + + + K Sbjct: 300 HPTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFTNFFNK 340 Score = 201 bits (510), Expect = 4e-49, Method: Composition-based stats. Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 1/224 (0%) Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 LQ++ + + L ++ T S + E Y Q + YI+ + L I+D Sbjct: 442 LQKDNKNPDTLYLNEHNTNSSSINIKENKPNNFYVDMKIIGQFNNTYILIEKDKELYIID 501 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAAHE+++FEK + + + SQ LL+P +I+L E E + E+ + G E F Sbjct: 502 QHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKNSGFSVETF 561 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 G I I+E+P IL K N+ L DI+ + + + T + I AT+AC ++++ Sbjct: 562 GEYTINIKEVPLILGKPNVENLFMDILYNLKNMKSKETSTIKYNAI-ATLACKSAVKAND 620 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ E+ +L+ +M N C HGRPT IK L D+EK F R Sbjct: 621 NLKEEEIKKLIEDMLILNNPYTCPHGRPTMIKFTLKDLEKKFKR 664 >gi|317060759|ref|ZP_07925244.1| DNA mismatch repair protein mutL [Fusobacterium sp. D12] gi|313686435|gb|EFS23270.1| DNA mismatch repair protein mutL [Fusobacterium sp. D12] Length = 502 Score = 319 bits (817), Expect = 1e-84, Method: Composition-based stats. Identities = 146/501 (29%), Positives = 244/501 (48%), Gaps = 32/501 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L E + N IAAGE++E P+ +KEL+ENSLDA S + I GG+ F +I D+G Sbjct: 3 KIHILEESVSNAIAAGEVVENPASLVKELLENSLDAGSKNIYLFIREGGR-FVEIRDDGV 61 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++V+RH TSKIS +D + ++GFRGEAL SI AVS L++ S ++ G+ Sbjct: 62 GMSREDVLLSVERHATSKISKKEDLFALQSYGFRGEALSSIAAVSKLSITSCELGSSMGS 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G K++ ++ GT + ++DLFF PARL FL+ E I D++ + A+A Sbjct: 122 KMTVLGGKVTGIKDFPRTQGTDIVIQDLFFNTPARLKFLRKASTEYIQIKDIVLKEALAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V + S+ I ++ G + + N + GY G Sbjct: 182 PEVKIRLEIDGKE----SIYSSGNGLENTILEIFGRNALKNLKKFAY--------GYVGN 229 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + + ++F+NGR V+ K I I +Y + G+YP + L I ++DVNV Sbjct: 230 EKLYRSSRDSLFIFVNGRPVKAKLIEEAIIDSYYTKLMKGKYPFACVFLRIPASEIDVNV 289 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS-----------SFHQD 348 HP+K I+F N + + + + SI++ ++ + + K +F + Sbjct: 290 HPSKKIIKFANASEVYSLVRNSIEEVFQEEKEFSFAQFEVKEEPRVLEIEKSTERNFREM 349 Query: 349 NAPKTHLPKYATSLTNTQ--EKLFLQENRLSTNDLLPSDDPTYSEDNDP----VEESEAT 402 + L + + Q EK + QE + L + D EE + Sbjct: 350 EREEEGLKQEFSWQEALQKEEKTYFQEEKTEKIPLFDLQNDKIPAIKDRRSFVEEERSSL 409 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + AQI+ +++ + I DQH HER+++E++++ + I Q LL P Sbjct: 410 PHYDFKILAQIYDTFLLVERKGIFEIYDQHIIHERVLYEELKEKYYGHSIQKQQLLVPLR 469 Query: 463 IDLLEGECALIMEHDEDLHRL 483 + L E AL + +LH L Sbjct: 470 LSLDPREKALFLNMRNNLHFL 490 >gi|284006624|emb|CBA71885.1| DNA mismatch repair protein [Arsenophonus nasoniae] Length = 618 Score = 319 bits (817), Expect = 1e-84, Method: Composition-based stats. Identities = 146/564 (25%), Positives = 244/564 (43%), Gaps = 59/564 (10%) Query: 28 KELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFS 85 KEL+ENSLDA +SR++ I GG +I DNG G+ E++ +A++RH TSKI+ +D + Sbjct: 2 KELVENSLDAGASRIDIEIERGGAKLIRIHDNGSGIAKEDLTLALERHATSKIATLEDLA 61 Query: 86 NIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSV-RPVAMNPGTIVEV 144 I + GFRGEAL SI +VS L L SR Q G +++ +P A GT VEV Sbjct: 62 AIKSMGFRGEALASISSVSRLILTSRVETQTEAWQAYAEGREMNVTLKPAAHPIGTTVEV 121 Query: 145 RDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN 204 DLF+ PAR FL++E+ E + I +V+RR+A+A V+ + + Sbjct: 122 LDLFYNTPARRKFLRTEKTEFSHIDEVVRRIALARFDVAINLHHNGKLVRQYRATKSEEQ 181 Query: 205 FPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFI 264 + R++ + G FI NA++L + ++ ++G+ P + Y ++NGR ++D+ I Sbjct: 182 YERRLAAICGSTFIQNALKLGWQHGDLAIKGWITNPDLGKTV-EIQYCYVNGRMMRDRLI 240 Query: 265 LSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQK 324 IR AYA+ P + VL L IDP QVDVNVHPAK +RF ++ +FI Q + Sbjct: 241 NHAIRQAYADRQPDEQQAAYVLYLTIDPSQVDVNVHPAKQEVRFHQARLVHDFIYQGVNT 300 Query: 325 AINKKGISTSSVLSK-KMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST----- 378 ++++ + V K S + + + N ++ L ++E + Sbjct: 301 LLSQQQKQFNQVTIDLKQESHPVLGLQNRLAAGENFFASDNPKQDLVVEEQKAQVITELR 360 Query: 379 --NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 N + PS+ ++S N+ + + + G Q+ QN Q L + E Sbjct: 361 ACNQISPSETTSFSCYNNGKITQKTYNKKQGELYQQLMQNEACEQEKIPLFPERKPIKTE 420 Query: 437 R----------------------------------------------LIFEKMRQDFNST 450 + ++ + Sbjct: 421 KLAVKSVFVEKNDKNYTFGKILTIYSKNFAFIESSFGIGLLSLAEAERYLKRSQLIPTDK 480 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 + SQ LL P + L E E L LG N I + L +N+ Sbjct: 481 GLKSQPLLIPIKLALTEKEIETFYRVKVLLSTLGFDI-NISHNKATISAVSCPLRSQNLA 539 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIE 534 +L ++ + +++ + + Sbjct: 540 ELFPKLLKYLAQNTSCQVKELVVW 563 >gi|110667417|ref|YP_657228.1| DNA mismatch repair protein MutL [Haloquadratum walsbyi DSM 16790] gi|109625164|emb|CAJ51584.1| DNA mismatch repair protein MutL [Haloquadratum walsbyi DSM 16790] Length = 772 Score = 318 bits (815), Expect = 2e-84, Method: Composition-based stats. Identities = 123/405 (30%), Positives = 197/405 (48%), Gaps = 10/405 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + + QIAAGE++ERP+ +KELIENSLDA+++R+ + GG +I D+G G Sbjct: 8 ITALDTETVRQIAAGEVVERPASVVKELIENSLDADATRISVAVESGGADGIRIRDDGIG 67 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 M + + A++ H TSKI D D ++ + T GFRGEAL +I AVS +T+ ++P N G Sbjct: 68 MDEDAVQRAIKEHTTSKIDDINDLASGVGTLGFRGEALYTISAVSKMTIRTKPRDGNRGT 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G + V GT+VE+RDLFF PAR FLK+ E + I V+ A+A Sbjct: 128 ELHIEGGTVVDVEAAGCPEGTVVEIRDLFFNTPARRKFLKTTATEFDHINTVVTHYALAN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE----KSNEITLQG 235 P V+ T + + GN + V G + + + + ++G Sbjct: 188 PDVAITLEHNDREVF---ATTGRGNLESAVLSVYGREVAESMISITTGDIESDRITAIEG 244 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 P R FINGR V+ + + I AY + + RYP +L L+IDP + Sbjct: 245 LISHPEKTRSTRQYLSTFINGRYVEARALREAIINAYGDQLAANRYPFALLFLDIDPGSI 304 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHP K +RF N T +R+ + +I++A+ G+ S + + + + Sbjct: 305 DVNVHPRKMEVRFDNETGVRDAVTNAIREALLSAGLIRSRAPRGQSAPAETEITQSSPDV 364 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 + + + + E + T+ D + ++E Sbjct: 365 TTKSANDDTNVDNNEITETSVHTSAEKSEPDNNIKKTTQAQSDAE 409 Score = 160 bits (404), Expect = 8e-37, Method: Composition-based stats. Identities = 64/253 (25%), Positives = 116/253 (45%), Gaps = 10/253 (3%) Query: 346 HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 H+D + + Q K + ++ + + VE + Sbjct: 515 HKDAGEECDAVVSGNNHNKNQSKKADPNDSVNEQSVQHDLGGDVATLEPTVESLPS---- 570 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 QI + YII+++ DGLV++DQHAA ER+ +E+++ T +T+Q L P I+L Sbjct: 571 -LRILGQIDETYIIAESDDGLVLIDQHAADERINYEQLQATLAET-VTTQALAEPVKIEL 628 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE----II 521 GE A + E+ + L R+G + + I + +PA + P L+RD++ E + Sbjct: 629 TAGESAQVEEYADALERVGFRVTDGDGDNIVVTAVPAAFASALDPALVRDVLAETAESLN 688 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 + T++ ++ILA +ACY S+ + LL +++ N C HGRP I Sbjct: 689 SHDRSETIKTLTDDILADLACYPSLTGNTALTEGSTVNLLEQLDTCENPYACPHGRPVLI 748 Query: 582 KLKLSDIEKLFGR 594 + ++++ F R Sbjct: 749 EFDRTELDARFER 761 >gi|120603501|ref|YP_967901.1| DNA mismatch repair protein MutL [Desulfovibrio vulgaris DP4] gi|120563730|gb|ABM29474.1| DNA mismatch repair protein MutL [Desulfovibrio vulgaris DP4] Length = 711 Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats. Identities = 119/365 (32%), Positives = 202/365 (55%), Gaps = 9/365 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++ +E + GG+S+ + D+G G Sbjct: 13 IQVLPPELRNQIAAGEVVERPASVVKELVENSLDAGATAIEVALEDGGQSYIMVRDDGHG 72 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG-- 118 + ++E+ +AV RH TSK+++ + + I +FGFRGEALPSI +VS + S G Sbjct: 73 IPADELELAVTRHATSKVTNLAELARIMSFGFRGEALPSIASVSRFAMTSAHAAAEGGTV 132 Query: 119 -AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 +I + ++ + P A++ GTIVEVR+LF IPARL F+K++ ET ++ R+A+ Sbjct: 133 ATRIEVEHGRVLASGPAALHRGTIVEVRELFANIPARLKFMKTQATETKRCQELFARIAL 192 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A P ++FT S + R ++ +R+ + + + + + + G Sbjct: 193 ARPDIAFTLS---AGRRELLRFPAGQTLRQRLGTLWPPAVVETLYAFDRTTGTVRVHGLA 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + ++ +++NGR V D+ +L +R AY + YP VVL L+IDP +VDV Sbjct: 250 ADPRGAQPRPDRLLLYVNGRAVNDRLLLKAVREAYKGRLLAREYPQVVLFLDIDPEEVDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK+ +RFR+ + +++++ A+ + ++ F P Sbjct: 310 NVHPAKNEVRFRDEREVFVAVLRAVGDAV-EASAQGIPDETEPGTDPFAAPLRPVPPAAP 368 Query: 358 YATSL 362 +A L Sbjct: 369 HARPL 373 Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 13/187 (6%) Query: 409 ACAQIHQNYIISQT-TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 QI Y++ + D LV+VDQHAAHER++ ++R+ + L P + L Sbjct: 535 YLGQIADTYLVLRHGNDQLVLVDQHAAHERVLHARLRRGGMAGGGQ--LLALPIELPLHP 592 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 E + D+DL LG + G + +R +P +L + LR+ + Sbjct: 593 AELERLRLLDDDLRALGFECSTSGQ-TLRVRAMPPVLDRAGATSFLREALA--------- 642 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 ++ ++++ A MAC +I++G+ + E LL + P C HGRP ++ + Sbjct: 643 GRRENLDDLWAMMACKAAIKAGQHLTPDEAAGLLAQWLATPEHDFCPHGRPAVLRFNPGE 702 Query: 588 IEKLFGR 594 +E++F R Sbjct: 703 LERMFKR 709 >gi|332654853|ref|ZP_08420595.1| DNA mismatch repair protein HexB [Ruminococcaceae bacterium D16] gi|332516196|gb|EGJ45804.1| DNA mismatch repair protein HexB [Ruminococcaceae bacterium D16] Length = 678 Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats. Identities = 108/340 (31%), Positives = 181/340 (53%), Gaps = 6/340 (1%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I+ L + + IAAGE++ERP+ KEL+EN++DA +S+V I+ GG +F ++TD+ Sbjct: 5 MPTIQVLDSHVADLIAAGEVVERPASVAKELMENAIDAGASKVTVEISHGGLTFLRVTDD 64 Query: 60 GFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ + E+ A RH TSK+ D I T GFRGEAL +I AVS + +M+R Sbjct: 65 GKGIPAGELKTAFLRHATSKLRTAYDLEAIGTLGFRGEALAAISAVSRVEVMTRTADAPL 124 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 GA +++ G + GT + VRDLF+ PARL F+K + E + V++R+A+ Sbjct: 125 GASLSLEGGVPGEIEEAGCPLGTTMVVRDLFYNTPARLKFMKKDSAEGAAVFAVVQRVAL 184 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++P+VS F + +G + V+G + E+ + I + G+ Sbjct: 185 SHPEVSVKFIRDGK---QELLTPGDGALQSAVYAVLGRELALGFREVKSGGDGIKVTGFV 241 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P R + N + F+NGR V+ + +++ + AY +G++P VL +E+ QVDV Sbjct: 242 SQPACCRASRNWQFFFVNGRQVKSRLLMAALEQAYQNQKMVGKFPACVLHVEVKLSQVDV 301 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL 337 NVHPAK+ ++F + + N + ++ + + Sbjct: 302 NVHPAKTEVKFGSEREVFNAVYHAVLSVLEGDRSHPQATF 341 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 65/268 (24%), Positives = 119/268 (44%), Gaps = 6/268 (2%) Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + L K+ + L K+A + + + + E + + Sbjct: 415 DNSVHPVENLVDKVDKIPQETLLNSKKLEKHAQVIPSEPQPQPIPEPVATPEPKDEPVEK 474 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 +E + ++ YII + D ++++D+HAAHER+ F++M+ Sbjct: 475 PVHMPEPEIEAEPVPEVEPWRLAGEVLNTYIIVEQGDKILLIDKHAAHERMNFDRMKA-- 532 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKK 507 + +QTLL+P I L E A+++ + L G + + FG A+A+RE P L + Sbjct: 533 QGHQAMAQTLLSPAICRLAPEEQAVLLSNLSLLEEFGFQVDDFGGGALAVREAPDYLDVE 592 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE-MEK 566 +IP L + +++ + R + +L TMAC +I+ G K E+ R+ + M+ Sbjct: 593 DIPDTLSQLAQKLLTTGHADPAAAR-DELLHTMACKAAIKGGWKTSPQELERVAQAVMDG 651 Query: 567 NPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + C HGRP I+L ++EK F R Sbjct: 652 SVK--YCPHGRPVAIELTRKELEKQFKR 677 >gi|56416596|ref|YP_153670.1| DNA mismatch repair protein [Anaplasma marginale str. St. Maries] gi|56387828|gb|AAV86415.1| DNA mismatch repair protein [Anaplasma marginale str. St. Maries] Length = 394 Score = 317 bits (813), Expect = 3e-84, Method: Composition-based stats. Identities = 128/363 (35%), Positives = 199/363 (54%), Gaps = 9/363 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L K +N+IAAGE+I+ P+ +KEL+ENS+DA ++ + +I GG++ + D+G Sbjct: 7 PIVVLDAKTVNKIAAGEVIDCPASVVKELVENSIDAGATTINVLIDKGGRNLISVIDDGC 66 Query: 62 GMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ +E+ A H TSK+ D D +NI + GFRGE L SI AV+ ++S+ Sbjct: 67 GIPRDEMERAFICHATSKLPDNDLNNIRSMGFRGEGLTSIAAVARTKMVSKYRGCTEAWS 126 Query: 121 IAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + GEK + P A+ GT +EVRDLFF P RL FL++E+ ET I D++ R A A Sbjct: 127 IVLEGGEKTRDLSPEALPCGTSIEVRDLFFATPTRLKFLRTEKAETQSIVDLMYRFATAR 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQV--IGEDFINNAVELNEKSNEITLQGYT 237 +F+ + +K + R+ ++ G+ F ++E+ S+ I + GY Sbjct: 187 FSTAFSLTIADKQIFKYPA---REDLMSRLWEMKPFGDAFREQSLEVRFHSDAINITGYI 243 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +PTFNR + Y F+NGR V + I++AY+E IP R+PVVV+ +EI P VDV Sbjct: 244 SVPTFNRSRPDMIYTFVNGRPVHSTLFMGAIKSAYSEFIPRDRHPVVVMCMEILPGDVDV 303 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS--TSSVLSKKMISSFHQDNAPKTHL 355 NVHP+K +RFRN + + +++++ A++ + F DN P Sbjct: 304 NVHPSKLEVRFRNRKQVYSVVVEALATALSSNVYRELPPRTPVGGGLDHFAVDNTPVLDT 363 Query: 356 PKY 358 P Y Sbjct: 364 PHY 366 >gi|298160978|ref|NP_001165838.1| DNA mismatch repair protein Mlh1 [Sus scrofa] gi|285818446|gb|ADC38896.1| mutL-like protein 1 [Sus scrofa] Length = 757 Score = 317 bits (813), Expect = 3e-84, Method: Composition-based stats. Identities = 126/530 (23%), Positives = 218/530 (41%), Gaps = 22/530 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+ + ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLAHISTYGFRGEALASISHVAHVAITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 AHYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + N + I + G +E+ + + GY Sbjct: 188 SGISFSVKKQGETVADVRTLP-NATTVDNIRSIFGNAVSRELIEVECEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K + F + I + Q I+ + S + + Sbjct: 306 NVHPTKHEVHFLHEDSILERVQQHIESRLLGSNASRTYFTQTLLPGLTGPSGEAVKSAAD 365 Query: 358 YATSLTNTQEKLFLQE------NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 S T + +K++ + + L + S + + T A Sbjct: 366 VTPSSTGSGDKVYAYQMVRTDCREQKLDAFLQPASKSLSSQPQAIVPEDRTDAFGSEARQ 425 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 Q+ + + + +H + E E+ S + Sbjct: 426 ---QDEEMLELPAPSEVAAKHQSLEEDTAERTSDLSEKRGPPSSPGNPRKRHRESSDVEM 482 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP--QLLRDIIDE 519 + + +++ I I + + + + N + LR+++ Sbjct: 483 VEDANRKEMTAACI----PRRRIINLTSVLTLQEEINERGHETLREMLHN 528 >gi|257457433|ref|ZP_05622603.1| DNA mismatch repair protein [Treponema vincentii ATCC 35580] gi|257445162|gb|EEV20235.1| DNA mismatch repair protein [Treponema vincentii ATCC 35580] Length = 716 Score = 317 bits (813), Expect = 3e-84, Method: Composition-based stats. Identities = 137/670 (20%), Positives = 250/670 (37%), Gaps = 86/670 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++ L + +IAAGE+++RP+ I+EL++N+LDA +S+++ IAGGG ++TDNG Sbjct: 55 PVKALDPETARKIAAGEVVDRPAAVIRELLDNALDAGASKIQVEIAGGGIERIRVTDNGC 114 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ + H TSKIS +D ++H+ GFRGEAL SI AVS L + S Sbjct: 115 GMSREDLAICTDTHTTSKISTAEDLLSLHSLGFRGEALSSIKAVSDLEITS-TRDGPAAW 173 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ ++ ++P + GT+V V +LF PAR FLK ET L + A+ + Sbjct: 174 KL-----QLGKIQPARLPAGTVVLVENLFENFPARKQFLKRAAAETALCRTIFLDKALPH 228 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F R+ + ++ ++ E+ + + G Sbjct: 229 YQTEMRFIADGELRFLLP--PAKSLRERCLAAFSFKEPEALFFEIEGSGEHFSFRIVLGS 286 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 R + VF+NGR + + + + P G +PV L L + P +VD N+ Sbjct: 287 SDVVRSDKRAILVFVNGRRITEFGLTQAVEYGSEGYFPNGGHPVAFLFLTVAPSRVDFNI 346 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST----------SSVLSKKMISSFHQDN 349 HPAK RF++ + I + + ++ + +++ + + S H D Sbjct: 347 HPAKKEARFQDYSAIHHAVSSAVGSFYRQHTVASLLKEKYDPGLTRPFDFRSGGSLHSDT 406 Query: 350 APKTHLPKYATSLTNTQEKLFL-QENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 + A ++ + Q + V++ A + Sbjct: 407 GRASGTDGQAGTIGGISFRPNAGQAGGQDAAPYSVWSEQNRLYAESLVQKHRAVNGNYPP 466 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 ++ Y I + G++ +A ++ I Sbjct: 467 PSDRVKNRYEIPEENTGVLSDGYGSAVRQIAAAAAVSYTAGGHIIPPPAAVGSSYTDEAP 526 Query: 469 ECALIMEHDE-DLHRLG--------------------------IKAERFGPNAIAIRE-- 499 + D LG I ++ N ++E Sbjct: 527 YMQPPPDIPPADFKLLGQVAGTFIAVEKHDALYLIDQHAAHERIIFDQLKHNTGGVQELL 586 Query: 500 IP--AILSKKNIPQLL---RDII----DEIIDSST------------TYTLQDRIENI-- 536 IP I + + + R+++ + D T T +D I +I Sbjct: 587 IPYRIITASEEDDSFIRKHRELLCKAGFALSDEGAGVWQVTAVPARWTGTERDLIRDITG 646 Query: 537 ------------LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 LA+ AC + + + + R+ + + P C HGRP +I L Sbjct: 647 VRKNAGDILYQILASAACRSACKDHAILDPVTQQRIAAQAFELPEP-ICPHGRPIWIILT 705 Query: 585 LSDIEKLFGR 594 ++ K R Sbjct: 706 REELFKRVKR 715 >gi|46578899|ref|YP_009707.1| DNA mismatch repair protein MutL [Desulfovibrio vulgaris str. Hildenborough] gi|46448311|gb|AAS94966.1| DNA mismatch repair protein MutL, putative [Desulfovibrio vulgaris str. Hildenborough] gi|311232757|gb|ADP85611.1| DNA mismatch repair protein MutL [Desulfovibrio vulgaris RCH1] Length = 744 Score = 317 bits (813), Expect = 3e-84, Method: Composition-based stats. Identities = 119/365 (32%), Positives = 204/365 (55%), Gaps = 9/365 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++ +E V+ GG+S+ + D+G+G Sbjct: 13 IQVLPPELRNQIAAGEVVERPASVVKELVENSLDAGATAIEVVLEDGGQSYIMVRDDGYG 72 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMS---RPPQNNT 117 + ++E+ +AV RH TSK+++ + + I +FGFRGEALPSI +VS + S + Sbjct: 73 IPADELELAVTRHATSKVTNLAELARIMSFGFRGEALPSIASVSRFAMTSAHAKAEGGTV 132 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 +I + ++ + P A++ GTIVEVR+LF IPARL F+K++ ET ++ R+A+ Sbjct: 133 ATRIEVEHGRVLASGPAALHRGTIVEVRELFANIPARLKFMKTQATETKRCQELFARIAL 192 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 A P ++FT S + R ++ +R+ + + + + + + G Sbjct: 193 ARPDIAFTLS---AGRRELLRFPAGQTLRQRLGTLWPPAVVETLYAFDRSTGTVRVHGLA 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P + ++ +++NGR V D+ +L +R AY + YP VVL L+IDP +VDV Sbjct: 250 ADPRGAQPRPDRLLLYVNGRAVNDRLLLKAVREAYKGRLLAREYPQVVLFLDIDPEEVDV 309 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHPAK+ +RFR+ + +++++ A+ + ++ F P Sbjct: 310 NVHPAKNEVRFRDEREVFVAVLRAVGDAV-EASAQGIPDETEPGTDPFAAPLRPVPPAAP 368 Query: 358 YATSL 362 +A L Sbjct: 369 HARPL 373 Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 13/187 (6%) Query: 409 ACAQIHQNYIISQT-TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 QI Y++ + D LV+VDQHAAHER++ ++R+ + L P + L Sbjct: 568 YLGQIADTYLVLRHGNDQLVLVDQHAAHERVLHARLRRGGMAGGGQ--LLALPIELPLHP 625 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 E + D+DL LG + G +++R +P +L + LR+ + Sbjct: 626 AELERLRLLDDDLRALGFECSTSGQ-TLSVRAMPPVLDRAGATSFLREALA--------- 675 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 ++ ++++ A MAC +I++G+++ E LL + P C HGRP ++ + Sbjct: 676 GRRENLDDLWAMMACKAAIKAGQRLTPDEAAGLLAQWLATPEHDFCPHGRPAVLRFNPGE 735 Query: 588 IEKLFGR 594 +E++F R Sbjct: 736 LERMFKR 742 >gi|317037205|ref|XP_001398763.2| DNA mismatch repair protein Mlh1 [Aspergillus niger CBS 513.88] Length = 723 Score = 317 bits (813), Expect = 3e-84, Method: Composition-based stats. Identities = 127/501 (25%), Positives = 221/501 (44%), Gaps = 14/501 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L ++N+IAAGEII P A+KELIEN++DA S+ +E ++ GG QITDNG Sbjct: 30 RIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKDGGLKLLQITDNGH 89 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 90 GIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAW 149 Query: 120 QIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + S K+S + + A GT + V DLF+ +P R +S E I DV+ R ++ Sbjct: 150 RAHYSDGKLSAAPKATAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDVVGRYSVH 209 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGY 236 V+F+ + ++ N +RI Q+ G N V+ N + + G+ Sbjct: 210 CSGVAFSCRKHGDSGVSVST-PAAANTIDRIRQIHGSAVANELVKFNVEDEKLGFRSSGF 268 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 ++ +FIN R+V+ I + Y+ +P G +P V + LEI+P++VD Sbjct: 269 ATNANYH-VKRTTILLFINHRSVESTAIKRAVEQTYSSFLPKGGHPFVYIDLEIEPQRVD 327 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS-----TSSVLSKKMISSFHQDNAP 351 VNVHP K + F N I I I+ + + S + + + ++D Sbjct: 328 VNVHPTKREVNFLNEDEIIECICNEIRSKLAQVDSSRTFLTQTLLPGVTTMEPANRDPEG 387 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 +PK ++ E ++ + T ++ L Sbjct: 388 TDTVPKTPSTTKKPYEHNLVRTDSKVRKITSMLTPATPHTPTASQADTTVLDEGLQYETT 447 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 + I + L ++A H + E + + + + + Sbjct: 448 SREPHRISFTSVKNLRASVRNAMH-NTLTETIASHTYVGLVDERRRIAAIQSGVKLYLID 506 Query: 472 LIMEHDEDLHRLGI-KAERFG 491 M E +++G+ FG Sbjct: 507 YGMFCTEFFYQIGLTDFANFG 527 >gi|301112887|ref|XP_002998214.1| mismatch repair endonuclease pms1, putative [Phytophthora infestans T30-4] gi|262112508|gb|EEY70560.1| mismatch repair endonuclease pms1, putative [Phytophthora infestans T30-4] Length = 686 Score = 317 bits (812), Expect = 3e-84, Method: Composition-based stats. Identities = 125/667 (18%), Positives = 248/667 (37%), Gaps = 88/667 (13%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 L + + +I +G+ + + A+KEL+EN+LDA ++++E + G+ F+++DNG G+ Sbjct: 8 HVLDRRDVQRICSGQSVVDLATAVKELVENALDAGATQIEVKLKEFGRDAFEVSDNGAGV 67 Query: 64 TSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA- 119 E ++H TSKIS +D + +FGFRGEAL SI + + T+ +R + G Sbjct: 68 APENYASLARKHYTSKISSFEDIETVASFGFRGEALSSICELAASFTVCTRTQNDAVGTL 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLK-SEQVETNLITDVIRRMAIA 178 + + + A GT V V +LF + R K + + + V++ A++ Sbjct: 128 LMYDASGALVKETKKARPTGTTVAVEELFKPLAVRYKDFKRNIKKHYAKLLKVLQAYAVS 187 Query: 179 YPKVS---FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV-------ELNEKS 228 V F + S+R+ + + E I+ V G F + E N Sbjct: 188 CANVKICVFNITGKNSSRHVVLATQAHQTMGENIANVFGTKFFRTLIRSSTTETEDNLSG 247 Query: 229 NEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 E ++GY G + ++ + FINGR + T+ + + + P +L Sbjct: 248 QERKVEGYVSKVGAGVGRSDNDRQFFFINGRPFDLPKMAKTLNEVWRQYEM-KQKPACIL 306 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII-------------QSIQKAINKKGIST 333 + DVNV P K ++ I + ++Q + Sbjct: 307 NFLLPLGDYDVNVTPDKRETFVKHEAEIIDAFKTGINKLYEPSRGTFTVQPLLTAFAQRF 366 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSL--------TNTQEKLFLQENRLS----TNDL 381 + K +I Q + ++ + ++KL+ + + Sbjct: 367 PAQKPKPVIVEILQPRNQRGAASAPSSPEQILLDLRKSAKRQKLYSPLPSQAILSTPEEH 426 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS------QTTDGLVIVDQHAAH 435 S D + EE + ++ + S +T + + Sbjct: 427 AWSFDEMIKQRQQYFEEEVEYERKRKTNRLKVPKTCSTSVDDNALETDNEVAAAALQRVL 486 Query: 436 ERLIFEKMR---------------------------------QDFNSTKITSQTLLTPEI 462 ++ F++M+ +T + Q L+ P Sbjct: 487 KKEDFKRMQVLGQFNLGFIIGKLGNDLFIIDQHASDEKFNYETLQQTTVMHQQPLVRPLR 546 Query: 463 IDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 ++L GE +I++H + G + + + +P + + +R++ Sbjct: 547 LELTAGEEMVILDHLGVFTKNGFTFLVDKDAPATKKLKLLSLPFTKHTQFGTEDIRELAS 606 Query: 519 EIID--SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 ++D +T+ ++ + A+ AC SI G + EM +++R + C HG Sbjct: 607 LLMDAPMNTSTIRLPKVMAMFASRACRSSIMIGTALHKEEMQKIVRNLSGLDQPWNCPHG 666 Query: 577 RPTFIKL 583 RPT L Sbjct: 667 RPTLRHL 673 >gi|119174382|ref|XP_001239552.1| hypothetical protein CIMG_09173 [Coccidioides immitis RS] Length = 775 Score = 316 bits (811), Expect = 5e-84, Method: Composition-based stats. Identities = 114/408 (27%), Positives = 193/408 (47%), Gaps = 15/408 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L ++N+IAAGEII P A+KELIENS+DA ++ VE ++ GG QITDNG Sbjct: 28 KIQALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGATAVEILVKDGGLKLLQITDNGH 87 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ SE++P+ +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 88 GIDSEDLPILCERFTTSKLKAFEDLSSIATYGFRGEALASISHIAHLTVTTKTAGSSCAW 147 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + K+ +P A GT + V DLF+ +P R +S E I D+ Sbjct: 148 RAHYRDGKLVPAKPGQSAEPKPTAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDI 207 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN-- 229 + R A+ VSF+ + ++ N + +RI Q+ G N + + + + Sbjct: 208 VGRYAVHCNGVSFSCKKHGDSGVSVST-PVNSSTIDRIRQIHGSAVANELIPFDVEDSAL 266 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 G+ ++ +FIN R+V+ I + Y+ +P G +P L +E Sbjct: 267 GFRASGFASNANYH-AKRTVILLFINHRSVESSGIRKAVEQTYSAFLPKGGHPFAYLNIE 325 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P +VDVNVHP K + F N I I +++ + S+ + +++ ++ H Sbjct: 326 IEPHRVDVNVHPTKREVNFLNEDEIIELICNAVRTKLANVD-SSRTFMTQTLLPGIHPSG 384 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 P ++ + ++ + L D + Sbjct: 385 TPPADTSSPRATIEGKVPLRTVAGSKRPYENNLVRTDVKMRKITSMFP 432 >gi|50732924|ref|XP_418828.1| PREDICTED: similar to DNA mismatch repair protein homolog [Gallus gallus] Length = 757 Score = 316 bits (811), Expect = 5e-84, Method: Composition-based stats. Identities = 109/329 (33%), Positives = 172/329 (52%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG Q+ DNG G Sbjct: 8 IRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQVQDNGCG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLHIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTADAKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S KI +P A N GT + V DLF+ + R LK+ E I +V+ R AI Sbjct: 128 ASYSDGKIKAPPKPCAGNQGTQIMVEDLFYNVNTRRKALKNPSEEYAKILEVVGRYAIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + S N + I + G +E+ + ++GY Sbjct: 188 SGISFSVKKQGDTVSDVRTLS-NATTVDNIRSIFGNAVSRELIEVGCEDANLAFKMKGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 TNANYSVKKCIFL-LFINHRLVESTALRKAIETVYAAYLPKSTHPFLYLSLEIAPKNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q ++ + Sbjct: 306 NVHPTKHEVHFLHEDSILERVQQHVESKL 334 >gi|323143738|ref|ZP_08078406.1| DNA mismatch repair protein, C-terminal domain [Succinatimonas hippei YIT 12066] gi|322416451|gb|EFY07117.1| DNA mismatch repair protein, C-terminal domain [Succinatimonas hippei YIT 12066] Length = 650 Score = 316 bits (811), Expect = 5e-84, Method: Composition-based stats. Identities = 118/345 (34%), Positives = 191/345 (55%), Gaps = 5/345 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+LS ++ NQIAAGE++ERPS +KEL+EN++DA+++++ + GK+ ++ DNG Sbjct: 1 MPIRRLSVQLANQIAAGEVVERPSSVVKELLENAVDAKATKIVCDLKNSGKTLIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+P+A+ H TSKI+ +D I T GFRGEAL SI AVS LTL SR + Sbjct: 61 QGIPHEELPLALAPHATSKIATLEDLEAILTLGFRGEALASIAAVSKLTLTSRTKDEDHA 120 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + + ++ + P A GT VEV +LFF PAR FL+S++ E I ++ R A+ Sbjct: 121 FSVEVEGPQQDPEINPAAHPVGTSVEVCELFFNTPARRRFLRSDRTEFMHIREIFVRTAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFP-ERISQVIGEDFINNAVELNEKSNEITLQGY 236 A P + F + N + + R+S++ G DF N + + + + + G Sbjct: 181 ANPDIDFELNLDGKNVVNVKAVMGDEKKRLVRLSKLAGSDFNRNGIFVRGEDPCLNVSGV 240 Query: 237 TGIPTFNRGNA-NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 P +A ++F+NGR + DK + ++ AY+E VL L DP +V Sbjct: 241 LLPPPDVEESAVENIFLFLNGRPIADKVLTHALKQAYSEVAGRSCPVRCVLYLNCDPHEV 300 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK 340 D+NVHP K +RF ++ + +++++ ++ K+ S L K+ Sbjct: 301 DINVHPRKDEVRFHEARLVHDVLLETVANSLRKELRSVDDGLKKE 345 >gi|262196403|ref|YP_003267612.1| DNA mismatch repair protein MutL [Haliangium ochraceum DSM 14365] gi|262079750|gb|ACY15719.1| DNA mismatch repair protein MutL [Haliangium ochraceum DSM 14365] Length = 762 Score = 316 bits (810), Expect = 7e-84, Method: Composition-based stats. Identities = 122/399 (30%), Positives = 204/399 (51%), Gaps = 10/399 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + +++QIAAGE++ERP+ +KEL+EN+LDA ++ V + GGK ++ DNG G Sbjct: 22 IRVLPDTVVDQIAAGEVVERPASVVKELVENALDAHATHVNVEVEAGGKQLIRVLDNGIG 81 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 MT ++ +A+ RH TSK+ DD + T GFRGEALPSI AVS +++ +R G + Sbjct: 82 MTESDVRLALTRHATSKLRALDDLYGLGTMGFRGEALPSIAAVSRMSITTRTRGQVAGTK 141 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + I G +I+ + V GT +E+RDL F +PARL FLK E + +TD + ++A+ +P Sbjct: 142 LDIEGGRITQISEVGAPVGTHIEIRDLLFNVPARLKFLKGNATEASHVTDSVAKLAMVHP 201 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V + + + ER ++G E++ N + + Y P Sbjct: 202 QVHVRLRHGGRVALE---APQHSSGLERARAILGSRLGRELHEVSGAENGVRVTAYLAAP 258 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + + Y+F+ R V+D+ +L + Y E +P GR+PV VL LE+ +VDVNVH Sbjct: 259 DLAQSTSRSTYLFVGKRAVKDRGLLHAVSMGYGELVPKGRFPVAVLCLEVPGGEVDVNVH 318 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K +RF + + + +++ G++ + LS++ S + A P + Sbjct: 319 PQKLEVRFSDGPAVFAAVRHVLRR-----GVAEAPWLSEQQSGSPVRMRAKAHVSPPRES 373 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 + +L ++ + LLP + Sbjct: 374 AGGGRASRLAERQAAGAARMLLPFGRDAAQPGASWQPPA 412 Score = 192 bits (487), Expect = 2e-46, Method: Composition-based stats. Identities = 54/200 (27%), Positives = 112/200 (56%) Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 V + + Q+ + Y++ ++ +V+VDQHAAHER+ F+++R + + Sbjct: 563 HVPRDPSRFFTELSYIGQLDRTYLVCESNGEMVLVDQHAAHERVAFQRLRDRWAQHAVPV 622 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL P+ DL + A+ + LH +G + E FG A++ +PA L + ++ +L Sbjct: 623 QRLLLPKTFDLSPEQAAVAEDARATLHDMGFELEHFGGTTYALKALPAGLRESDVETVLH 682 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 +++D++ + + L++R++ LAT+AC+ +R+G + + E+ L + +++ + C Sbjct: 683 ELLDDLAERGGSRALEERLDLALATIACHSVVRAGDALSAQEVRALFKSLDEVDFKAHCP 742 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRP +++ + +I + FGR Sbjct: 743 HGRPVLLRISVDEIARRFGR 762 >gi|73666847|ref|YP_302863.1| DNA mismatch repair protein MutL [Ehrlichia canis str. Jake] gi|72393988|gb|AAZ68265.1| DNA mismatch repair protein MutL [Ehrlichia canis str. Jake] Length = 682 Score = 316 bits (809), Expect = 8e-84, Method: Composition-based stats. Identities = 127/351 (36%), Positives = 207/351 (58%), Gaps = 3/351 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + IN+IAAGE+IE P+ +KEL+ENS+DA ++ ++ I GG++ ++DNG Sbjct: 1 MSIILLDPRTINRIAAGEVIECPASVVKELVENSIDANATTIDVAIERGGRNLIVVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+I +A RH TSK+ D D + + + GFRGE L SI AV+ + ++S+ ++T Sbjct: 61 IGIKKEDIEIAFARHATSKLPDGDLAKVKSLGFRGEGLTSIAAVAKVKMISKYQDSDTAW 120 Query: 120 QIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 I G+K + P +++ GT +EVRDLFF P RL FLK+E+ E I D+I ++A+ Sbjct: 121 LIVFEGGDKTQELTPDSLSCGTYMEVRDLFFATPNRLKFLKTEKAEVQSIIDMINKLAMV 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + F+ S +K Q +N + I + G +F N++ ++ K +I L GY G Sbjct: 181 NHGIMFSLSVDNKQVFKYLRQQSNIDRLSEIKAL-GIEFCKNSLPISVKEEQIELSGYIG 239 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 PT +R ++ Y F+NGR V D ++ +R AY++ I +YPVVVL L I QVD N Sbjct: 240 SPTLSRSKSSLIYTFVNGRPVYDSLLIGAVRYAYSDFIERDKYPVVVLYLNIPCDQVDSN 299 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 VHP KS +RF++ ++ ++ +I++ ++ + +++ F +DN Sbjct: 300 VHPNKSEVRFQDKKLVYRVVVNAIKEVLSINMNAKLKSINEFESDHFVRDN 350 Score = 175 bits (444), Expect = 2e-41, Method: Composition-based stats. Identities = 92/220 (41%), Positives = 135/220 (61%), Gaps = 1/220 (0%) Query: 376 LSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 +S + L +D + S ++ LG A QIH YI+SQT D ++IVDQHAAH Sbjct: 462 VSGSMGLENDKLSQVSYKKIENGSLIDNHLLGYALCQIHSRYIVSQTQDAIIIVDQHAAH 521 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC-ALIMEHDEDLHRLGIKAERFGPNA 494 ERL +E M+Q I Q LL PE+I++ L++E+ L +LG+ E G + Sbjct: 522 ERLTYEYMKQVMEKEGIKRQMLLIPEVIEMNNHLDLELLVEYKAKLLKLGLLIEPLGNLS 581 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQS 554 + +RE+PAI ++ L+ +I+D II+ T L D+I++I T+ACY SIRSGRK++ Sbjct: 582 VIVREVPAIFGSFDVKSLIINIVDSIIEVGDTLFLDDKIKDICGTIACYSSIRSGRKLKI 641 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN +LR ME +S QCNHGRPT+++L L +++KLF R Sbjct: 642 EEMNAILRSMENTAHSGQCNHGRPTYVELSLVELDKLFAR 681 >gi|296532257|ref|ZP_06895000.1| DNA mismatch repair protein MutL [Roseomonas cervicalis ATCC 49957] gi|296267415|gb|EFH13297.1| DNA mismatch repair protein MutL [Roseomonas cervicalis ATCC 49957] Length = 332 Score = 316 bits (809), Expect = 8e-84, Method: Composition-based stats. Identities = 129/328 (39%), Positives = 200/328 (60%), Gaps = 7/328 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR LS ++IAAGE++ERP+ A+KEL+EN+LDA +++V + GGG S + D+G Sbjct: 3 RIRLLSATTADRIAAGEVVERPAAAVKELVENALDAGATQVFVALEGGGVSRILVEDDGQ 62 Query: 62 GMTSEEIPMAVQRHCTSKISDD--FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ ++ + ++RH TSK+ ++ I T GFRGEALPSIGAV+ LTL SR P Sbjct: 63 GMSPADLALCIERHATSKLPEEAALFRIATLGFRGEALPSIGAVARLTLTSRVPGGE-AF 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G S +RP A PGT VEVRDLF+ PAR FLK+ E+ + ++R+A+A+ Sbjct: 122 RIDVEGGAKSEIRPAAGAPGTRVEVRDLFYATPARRKFLKTPATESGHAVEAVKRLALAW 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V F + + R+ ++G +F AV ++ E+ LQG+ G+ Sbjct: 182 PEVGFRMEVEGRTVLNLAA----SDRRTRLDALLGPEFARAAVTVSGGREELALQGFAGL 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 PT R A++ ++ +N R V+D + + +R AY + I GR+PV L LE+ P VDVNV Sbjct: 238 PTLTRATASEQHLVVNRRPVRDPLLRAALRVAYRDLIAPGRHPVAALFLELPPELVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 HP K+ +RFR+ +R +I ++++A+ Sbjct: 298 HPMKTELRFRDAAAVRGALISALRRALA 325 >gi|301757691|ref|XP_002914683.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Ailuropoda melanoleuca] Length = 757 Score = 315 bits (808), Expect = 1e-83, Method: Composition-based stats. Identities = 118/486 (24%), Positives = 205/486 (42%), Gaps = 10/486 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADAKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ANYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + + I + G +E+ + + GY Sbjct: 188 SGISFSVKKQGETVADVRTLPS-ATRVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESASLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K + F + I + Q I+ + S + Sbjct: 306 NVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGSSVEVVKSTTG 365 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT---HYQLGIACAQIH 414 S T + +K++ + + + D + +A + Sbjct: 366 VTPSSTGSGDKVYAHQMVRTDSREQKLDAFLQPMSKALSSQPQAIVPEDRTDASSGGAGQ 425 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Q+ + + + + + E + E + +S + + Sbjct: 426 QDEEMLELPEPAHVAATNQGTEVDVTEGTSEMSEKRGPSSSPGNPRKRPRESSDVEMVED 485 Query: 475 EHDEDL 480 + +++ Sbjct: 486 DSRKEM 491 >gi|320037401|gb|EFW19338.1| DNA mismatch repair protein mutL [Coccidioides posadasii str. Silveira] Length = 777 Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats. Identities = 114/408 (27%), Positives = 194/408 (47%), Gaps = 15/408 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L ++N+IAAGEII P A+KELIENS+DA ++ VE ++ GG QITDNG Sbjct: 28 KIQALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGATAVEILVKDGGLKLLQITDNGH 87 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ SE++P+ +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 88 GIDSEDLPILCERFTTSKLKAFEDLSSIATYGFRGEALASISHIAHLTVTTKTAGSSCAW 147 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + K+ +P A GT + V DLF+ +P R +S E I D+ Sbjct: 148 RAHYRDGKLVPAKPGQSAEPKPTAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDI 207 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN-- 229 + R A+ VSF+ + ++ N + +RI Q+ G N + + + + Sbjct: 208 VGRYAVHCNGVSFSCKKHGDSGVSVST-PVNSSTIDRIRQIHGSAVANELIPFDVEDSAL 266 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 G+ ++ +FIN R+V+ I + Y+ +P G +P L +E Sbjct: 267 GFRASGFASNANYH-AKRTVILLFINHRSVESSGIRKAMEQTYSAFLPKGGHPFAYLNIE 325 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P +VDVNVHP K + F N I I +++ + S+ + +++ ++ H+ Sbjct: 326 IEPHRVDVNVHPTKREVNFLNEDEIIELICNAVRTKLANVD-SSRTFMTQTLLPGIHRSG 384 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 P ++ + ++ + L D + Sbjct: 385 TPPADTSSPRATIEGKVPLRTVAGSKRPYENNLVRTDVKMRKITSMFP 432 >gi|242763863|ref|XP_002340659.1| DNA mismatch repair protein Mlh1, putative [Talaromyces stipitatus ATCC 10500] gi|218723855|gb|EED23272.1| DNA mismatch repair protein Mlh1, putative [Talaromyces stipitatus ATCC 10500] Length = 764 Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats. Identities = 114/387 (29%), Positives = 185/387 (47%), Gaps = 15/387 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L ++N+IAAGEII P A+KELIENS+DA S+ +E ++ GG QITDNG Sbjct: 31 RIRALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGSTSIEILVKDGGLKLLQITDNGH 90 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+ +D + I T+GFRGEAL SI +SHLT+ ++ ++ Sbjct: 91 GINVDDLPILCERFTTSKLREFEDLTAIGTYGFRGEALASISHISHLTVTTKTASSSCAW 150 Query: 120 QIAISGEKISSVRPVAMNP--------GTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ +P GT + V DLF+ +P R +S E I DV Sbjct: 151 RAHYSDGKLVPAKPSQSAKPKPTAGRGGTQITVEDLFYNVPTRRRAFRSSSEEYAKILDV 210 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + R A+ V+F+ + + + + +RI Q+ G N ++ N + + Sbjct: 211 VGRYAVHCSNVAFSCKKHGDSGSSI-ATTAKSSTIDRIRQIHGSSVANELIDFNIEDTKR 269 Query: 231 --ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL 288 G ++ +FIN R+V+ + I Y+ +P G +P + L L Sbjct: 270 LGFKASGLVTNANYH-VKRTTILLFINHRSVESSALKKAIEQTYSTFLPKGGHPFIYLDL 328 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 EI+P +VDVNVHP K + F N I I I + + S + + + + Sbjct: 329 EIEPNRVDVNVHPTKREVNFLNEDEIIESICSEITTRLAQVDSSRTFMTQTLLPGVPKES 388 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENR 375 + P + TS E ++ + Sbjct: 389 DIPPSDSATRRTSSQKPYENNLVRTDS 415 >gi|134084347|emb|CAK48687.1| unnamed protein product [Aspergillus niger] Length = 767 Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats. Identities = 126/508 (24%), Positives = 219/508 (43%), Gaps = 21/508 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L ++N+IAAGEII P A+KELIEN++DA S+ +E ++ GG QITDNG Sbjct: 21 RIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKDGGLKLLQITDNGH 80 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 81 GIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAW 140 Query: 120 QIAISGEKISSVRPVAMNP--------GTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ +P GT + V DLF+ +P R +S E I DV Sbjct: 141 RAHYSDGKLVPPKPGQSAAPKATAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDV 200 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + R ++ V+F+ + ++ N +RI Q+ G N V+ N + + Sbjct: 201 VGRYSVHCSGVAFSCRKHGDSGVSVST-PAAANTIDRIRQIHGSAVANELVKFNVEDEKL 259 Query: 231 -ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 G+ ++ +FIN R+V+ I + Y+ +P G +P V + LE Sbjct: 260 GFRSSGFATNANYH-VKRTTILLFINHRSVESTAIKRAVEQTYSSFLPKGGHPFVYIDLE 318 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS-----TSSVLSKKMISS 344 I+P++VDVNVHP K + F N I I I+ + + S + + + Sbjct: 319 IEPQRVDVNVHPTKREVNFLNEDEIIECICNEIRSKLAQVDSSRTFLTQTLLPGVTTMEP 378 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 ++D +PK ++ E ++ + T ++ Sbjct: 379 ANRDPEGTDTVPKTPSTTKKPYEHNLVRTDSKVRKITSMLTPATPHTPTASQADTTVLDE 438 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 L + I + L ++A H + E + + + + Sbjct: 439 GLQYETTSREPHRISFTSVKNLRASVRNAMH-NTLTETIASHTYVGLVDERRRIAAIQSG 497 Query: 465 LLEGECALIMEHDEDLHRLGI-KAERFG 491 + M E +++G+ FG Sbjct: 498 VKLYLIDYGMFCTEFFYQIGLTDFANFG 525 >gi|281485557|ref|NP_001069462.2| MutL protein homolog 1 [Bos taurus] gi|194677180|ref|XP_001790604.1| PREDICTED: MutL protein homolog 1 [Bos taurus] gi|297488412|ref|XP_002696983.1| PREDICTED: mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Bos taurus] gi|296475135|gb|DAA17250.1| mutL homolog 1, colon cancer, nonpolyposis type 2 [Bos taurus] Length = 758 Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats. Identities = 108/329 (32%), Positives = 168/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLEIVCERFTTSKLQSFEDLAHISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R A+ Sbjct: 128 AHYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYAVHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 + F+ + N + I + G +E+ + + GY Sbjct: 188 SGIGFSVKKQGETVADVRTLP-NATTVDNIRSIFGNAVSRELIEVECEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESASLRKAIETVYAAYLPKSTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEDSILERLQQHIESRL 334 >gi|76800920|ref|YP_325928.1| DNA mismatch repair protein MutL [Natronomonas pharaonis DSM 2160] gi|76556785|emb|CAI48359.1| DNA mismatch repair protein MutL [Natronomonas pharaonis DSM 2160] Length = 712 Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats. Identities = 116/402 (28%), Positives = 189/402 (47%), Gaps = 10/402 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + ++IAAGE++ERP+ +KEL+EN+LDA++SRV+ + GGK + D+G G Sbjct: 5 IRELDAETRDRIAAGEVVERPASVVKELVENALDADASRVDVTVEAGGKDRIVVADDGVG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + AV+ H TSK+ D D I T GFRGEAL +IG+V+ L L ++P G + Sbjct: 65 MSETDARAAVKEHTTSKLRDVSDLDTIGTLGFRGEALHAIGSVARLRLRTKPRDGTRGTE 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G + PV GT VEV LF +PAR +LK++ E + + V+ A+A P Sbjct: 125 LVVEGGDVVDCGPVGCPEGTTVEVTALFENVPARRKYLKTDTTEFDHVQQVVAGYALAAP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT---LQGYT 237 V+ + +G+ + +V G + + V + + ++ + G Sbjct: 185 DVAVRLDHDGRETF---ATPGDGDRQSAVLEVYGREVAASMVSVEQSWDDGPVAGVAGLV 241 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 P NR + +NGR V + I AY + RYP V+ +++ P VDV Sbjct: 242 SHPETNRAGRDYMTTLVNGRYVTASAVREAIVEAYGRQLAADRYPFAVIDIDLPPGGVDV 301 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K + F + +R + +++ A+ G+ S + S+ Q P P Sbjct: 302 NVHPRKLEVLFSDEKTVRERVENAVESALLDAGLLRSRAP--RGQSAPEQTEIPADEEPP 359 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 S + + D + +DP S Sbjct: 360 RTESGHRRRPAVGSSSTSGRAADSTEQSNAADDVRSDPPAAS 401 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 4/191 (2%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q Y++++ DGLV++DQHAA ER+ +E+++ + +T+Q L P + L Sbjct: 513 MTVFGQFDDTYLVAEADDGLVLIDQHAADERINYERLKAAVDGD-LTTQALAEPVSVSLT 571 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN---IPQLLRDIIDEIIDS 523 E AL+ E+ E L RLG + + + PA+L + +P+L RD++ E Sbjct: 572 AREAALVEEYGEALSRLGFRVRTDDDRTLTVTTAPALLVEAAGDAMPELARDLLGEFTGG 631 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 T+ ++++L +AC+ SI+ ++ + LL ++ N C HGRPT ++L Sbjct: 632 DPDGTVAAVVDDLLGDLACHPSIKGNTSLREGTVEGLLSALDDCENPYACPHGRPTVLEL 691 Query: 584 KLSDIEKLFGR 594 +IE F R Sbjct: 692 PREEIETRFER 702 >gi|317150427|ref|XP_001824017.2| DNA mismatch repair protein Mlh1 [Aspergillus oryzae RIB40] Length = 727 Score = 315 bits (807), Expect = 2e-83, Method: Composition-based stats. Identities = 115/373 (30%), Positives = 184/373 (49%), Gaps = 9/373 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L ++N+IAAGEII P A+KELIEN++DA S+ +E ++ GG QITDNG Sbjct: 30 RIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSLEILVKDGGLKLLQITDNGH 89 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 90 GIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAW 149 Query: 120 QIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + S K+ + + A GT + V DLF+ +P R +S E I DV+ R A+ Sbjct: 150 RAHYSNGKLPAAPKATAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDVVGRYAVH 209 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGY 236 V+F+ + ++ N +RI Q+ G N VE + + GY Sbjct: 210 CSGVAFSCRKHGDSGVSIST-PVTANTIDRIRQIHGSAVANELVEFKSEDRKLGFRSSGY 268 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 ++ +FIN R+V+ + I Y+ +P G +P + LEI+P +VD Sbjct: 269 VTNANYH-VKRTVILLFINHRSVESTAVKRAIEQTYSSFLPKGGHPFAYIDLEIEPHRVD 327 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHP K + F N I I Q I+ + + +S + + + P P Sbjct: 328 VNVHPTKREVNFLNEDEIIECICQEIKSNLTQVD--SSRTFLTQTLLPGVRTMEPAPRDP 385 Query: 357 KYATSLTNTQEKL 369 + T + Sbjct: 386 DSTDAEGRTPKTP 398 >gi|212529290|ref|XP_002144802.1| DNA mismatch repair protein Mlh1, putative [Penicillium marneffei ATCC 18224] gi|111380655|gb|ABH09704.1| MLH1-like protein [Penicillium marneffei] gi|210074200|gb|EEA28287.1| DNA mismatch repair protein Mlh1, putative [Penicillium marneffei ATCC 18224] Length = 759 Score = 315 bits (807), Expect = 2e-83, Method: Composition-based stats. Identities = 115/380 (30%), Positives = 192/380 (50%), Gaps = 15/380 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L ++N+IAAGEII P A+KELIENS+DA S+ +E ++ GG QITDNG Sbjct: 31 RIRALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGSTSIEVLVKDGGLKLLQITDNGH 90 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+ +D + I T+GFRGEAL SI +SHLT+ ++ ++ Sbjct: 91 GINVDDLPILCERFTTSKLKEFEDLTAIGTYGFRGEALASISHISHLTVTTKTASSSCAW 150 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ +P A GT + V DLF+ +P R +S E I DV Sbjct: 151 RAHYSDGKLVPAKPGQSAKPKPTAGRGGTQITVEDLFYNVPTRRRAFRSSSEEYAKILDV 210 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + R A+ V+F+ + ++ + + +RI Q+ G N +E N + + Sbjct: 211 VGRYAVHCANVAFSCKKHGDSGSSIST-AAKSSTIDRIRQIHGSAVANELIEFNVEDTKR 269 Query: 231 --ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL 288 G ++ +FIN R+V+ + +I Y+ +P G +P + L L Sbjct: 270 LGFKASGLVTNANYH-VKRTTILLFINHRSVESSALKKSIEQTYSTFLPKGGHPFIYLDL 328 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 EI+P +VDVNVHP K + F N I I I + + S + + + + Sbjct: 329 EIEPNRVDVNVHPTKREVNFLNEDEIIESICSEITTRLAQVDSSRTFMTQTLLPGVPNVS 388 Query: 349 NAPKTHLPKYATSLTNTQEK 368 + P + + A++++++Q+ Sbjct: 389 DTPSSDPARKASAVSSSQKP 408 >gi|189206011|ref|XP_001939340.1| DNA mismatch repair protein mutL [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187975433|gb|EDU42059.1| DNA mismatch repair protein mutL [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 734 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 119/388 (30%), Positives = 198/388 (51%), Gaps = 13/388 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L++ ++N+IAAGEII P A+KELIEN++DA S+ +E ++ GG QITDNG Sbjct: 30 RIKALAQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTALEILVKEGGLKLLQITDNGH 89 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +R TSK+ +D ++I T+GFRGEAL SI ++HL + +R +++ Sbjct: 90 GIDKEDLPILCERFTTSKLKAFEDLTSIGTYGFRGEALASISHIAHLKVTTRTKESSCAW 149 Query: 120 QIAISGEKISSVRPVA--------MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + + K+SS +P GTI+ V DLF+ +P+R +S E I ++ Sbjct: 150 EAHFADGKLSSPKPGQSAEPKPKAGRQGTIITVEDLFYNVPSRRRAFRSASEEYAKILEL 209 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--SN 229 + R A+ V+F+ I N + +RI Q+ G N VEL+ + Sbjct: 210 VGRYAVHCEGVAFSCKKIGENNSNSVTVPAAASVKDRIRQIHGSSAANELVELSVEDDRW 269 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 +G+ +N Q +FIN R+V+ I ++ YA +P G +P L LE Sbjct: 270 GFKCKGWVSSANYN-AKRTQMLLFINHRSVESPVIKKSVEQTYATFLPKGGHPFFYLSLE 328 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P++VDVNVHP K + F N I I +I++ ++K S S + + + Sbjct: 329 IEPQRVDVNVHPTKREVHFLNEDEIIAVICDAIRENLSKVDTSRSFMTQSLLPNPKAPFA 388 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLS 377 P A + ++ + + + Sbjct: 389 TPMKSNVPVAPGTGHASDRSVSRAPQTA 416 >gi|148677029|gb|EDL08976.1| mutL homolog 1 (E. coli), isoform CRA_b [Mus musculus] Length = 673 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 115/369 (31%), Positives = 184/369 (49%), Gaps = 10/369 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 28 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 87 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 88 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 147 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT++ V DLF+ I R LK+ E I +V+ R +I Sbjct: 148 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 207 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + N + I + G +E+ + + GY Sbjct: 208 SGISFSVKKQGETVSDVRTLP-NATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGYI 266 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 267 SNANYSVKKCIFL-LFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 325 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMISSFHQDNAPKTH 354 NVHP K + F + I + Q I+ + N + + L + + P T Sbjct: 326 NVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEAARPTTG 385 Query: 355 LPKYATSLT 363 + +TS + Sbjct: 386 VASSSTSGS 394 >gi|148677028|gb|EDL08975.1| mutL homolog 1 (E. coli), isoform CRA_a [Mus musculus] Length = 640 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 115/369 (31%), Positives = 184/369 (49%), Gaps = 10/369 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT++ V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + N + I + G +E+ + + GY Sbjct: 188 SGISFSVKKQGETVSDVRTLP-NATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMISSFHQDNAPKTH 354 NVHP K + F + I + Q I+ + N + + L + + P T Sbjct: 306 NVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEAARPTTG 365 Query: 355 LPKYATSLT 363 + +TS + Sbjct: 366 VASSSTSGS 374 >gi|13878583|sp|Q9JK91|MLH1_MOUSE RecName: Full=DNA mismatch repair protein Mlh1; AltName: Full=MutL protein homolog 1 gi|7595954|gb|AAF64514.1|AF250844_1 MutL homolog 1 protein [Mus musculus] Length = 760 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 115/369 (31%), Positives = 184/369 (49%), Gaps = 10/369 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT++ V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + N + I + G +E+ + + GY Sbjct: 188 SGISFSVKKQGETVSDVRTLP-NATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMISSFHQDNAPKTH 354 NVHP K + F + I + Q I+ + N + + L + + P T Sbjct: 306 NVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEAARPTTG 365 Query: 355 LPKYATSLT 363 + +TS + Sbjct: 366 VASSSTSGS 374 >gi|255958238|ref|NP_081086.2| DNA mismatch repair protein Mlh1 [Mus musculus] gi|74223060|dbj|BAE40671.1| unnamed protein product [Mus musculus] Length = 760 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 115/369 (31%), Positives = 184/369 (49%), Gaps = 10/369 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT++ V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + N + I + G +E+ + + GY Sbjct: 188 SGISFSVKKQGETVSDVRTLP-NATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMISSFHQDNAPKTH 354 NVHP K + F + I + Q I+ + N + + L + + P T Sbjct: 306 NVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEAARPTTG 365 Query: 355 LPKYATSLT 363 + +TS + Sbjct: 366 VASSSTSGS 374 >gi|26332473|dbj|BAC29954.1| unnamed protein product [Mus musculus] Length = 653 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 114/369 (30%), Positives = 184/369 (49%), Gaps = 10/369 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT++ V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + N + I + G +E+ + + GY Sbjct: 188 SGISFSVKKQGETVSDVRTLP-NATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMISSFHQDNAPKTH 354 NVHP K + F + + + Q I+ + N + + L + + P T Sbjct: 306 NVHPTKHEVHFLHEESVLQRVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEAARPTTG 365 Query: 355 LPKYATSLT 363 + +TS + Sbjct: 366 VASSSTSGS 374 >gi|73989710|ref|XP_859279.1| PREDICTED: similar to MutL protein homolog 1 isoform 5 [Canis familiaris] Length = 688 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 113/376 (30%), Positives = 180/376 (47%), Gaps = 7/376 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTAEAKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ATYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + N + I + G +E+ + + GY Sbjct: 188 SGISFSVKKQGETVADVRTLP-NATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K + F + I + Q I+ + S + Sbjct: 306 NVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEVVKSTTG 365 Query: 358 YATSLTNTQEKLFLQE 373 S T + +K++ + Sbjct: 366 ATPSSTGSGDKVYAHQ 381 >gi|73989702|ref|XP_859114.1| PREDICTED: similar to MutL protein homolog 1 isoform 2 [Canis familiaris] Length = 495 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 113/376 (30%), Positives = 180/376 (47%), Gaps = 7/376 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTAEAKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ATYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + N + I + G +E+ + + GY Sbjct: 188 SGISFSVKKQGETVADVRTLP-NATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K + F + I + Q I+ + S + Sbjct: 306 NVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEVVKSTTG 365 Query: 358 YATSLTNTQEKLFLQE 373 S T + +K++ + Sbjct: 366 ATPSSTGSGDKVYAHQ 381 >gi|73989704|ref|XP_534219.2| PREDICTED: similar to MutL protein homolog 1 isoform 1 [Canis familiaris] Length = 757 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 113/376 (30%), Positives = 180/376 (47%), Gaps = 7/376 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTAEAKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ATYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + N + I + G +E+ + + GY Sbjct: 188 SGISFSVKKQGETVADVRTLP-NATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K + F + I + Q I+ + S + Sbjct: 306 NVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEVVKSTTG 365 Query: 358 YATSLTNTQEKLFLQE 373 S T + +K++ + Sbjct: 366 ATPSSTGSGDKVYAHQ 381 >gi|148677030|gb|EDL08977.1| mutL homolog 1 (E. coli), isoform CRA_c [Mus musculus] Length = 760 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 115/369 (31%), Positives = 184/369 (49%), Gaps = 10/369 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT++ V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + N + I + G +E+ + + GY Sbjct: 188 SGISFSVKKQGETVSDVRTLP-NATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMISSFHQDNAPKTH 354 NVHP K + F + I + Q I+ + N + + L + + P T Sbjct: 306 NVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEAARPTTG 365 Query: 355 LPKYATSLT 363 + +TS + Sbjct: 366 VASSSTSGS 374 >gi|149729634|ref|XP_001489268.1| PREDICTED: mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Equus caballus] Length = 758 Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats. Identities = 110/329 (33%), Positives = 168/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ VI GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVIKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D + I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLAKISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ANYSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + N + I + G +E+ + + GY Sbjct: 188 SGISFSVKKQGETVADVRTLP-NATTVDNIRSIFGNAVSRELIEVGCEDKTLGFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEDSILERVQQHIESKL 334 >gi|58268004|ref|XP_571158.1| DNA binding protein [Cryptococcus neoformans var. neoformans JEC21] gi|57227392|gb|AAW43851.1| DNA binding protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 765 Score = 314 bits (804), Expect = 3e-83, Method: Composition-based stats. Identities = 121/435 (27%), Positives = 204/435 (46%), Gaps = 19/435 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +L++ +INQIAA EII RPS AIKEL+ENSLDA S+ ++ + GG QITDNG Sbjct: 24 PIHRLTKDVINQIAAAEIIHRPSNAIKELLENSLDAGSTSIKISVKDGGLKLLQITDNGH 83 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R+ TSK+ +D ++ T+GFRGEAL SI SH+ ++++ G Sbjct: 84 GINKDDLPLLCERYATSKLQKFEDLQSLGTYGFRGEALASISYCSHVEVVTKTKNEGCGW 143 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + + +P A N GT++ DLF+ +P R KS E N I DV Sbjct: 144 KAHYQDGSLIPAKPGGTADPKPAAANDGTVITAADLFYNMPLRKRAFKSTSDEYNRIIDV 203 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + + AI P V++ + + Q N I+ + N +E+ E + Sbjct: 204 VTKYAIHNPHVAWVCKKAGTALPDVATQVG-SNTKANIAALYTSALANELLEIPESELQP 262 Query: 231 ----ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 L+G+ + + +FIN R V + + Y +P G P L Sbjct: 263 ARLGAKLKGWVSNANSSWSKKGGWLLFINNRLVDSNKLKKAVEGHYTSYLPKGASPWAYL 322 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH 346 L+IDP ++DVNVHP KS +RF N I + ++Q++Q A+ +S S + + + Sbjct: 323 SLQIDPAKIDVNVHPTKSEVRFLNEDEIVDAVVQAVQTALEGANLSRSFTVQTLLPGAPT 382 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND---PVEESEATH 403 ++ A++ +T++ + R+ ++ T + + VE+ E Sbjct: 383 PLGKRESSNSTIASASFSTRKAAPNYKVRMDPSNRTLDSMFTVIDPSQLSGFVEDGELQE 442 Query: 404 YQLGIACAQIHQNYI 418 + + + Sbjct: 443 QERPSKRRNVDPEFQ 457 >gi|134112429|ref|XP_775190.1| hypothetical protein CNBE4630 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257842|gb|EAL20543.1| hypothetical protein CNBE4630 [Cryptococcus neoformans var. neoformans B-3501A] Length = 765 Score = 314 bits (804), Expect = 3e-83, Method: Composition-based stats. Identities = 121/435 (27%), Positives = 204/435 (46%), Gaps = 19/435 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +L++ +INQIAA EII RPS AIKEL+ENSLDA S+ ++ + GG QITDNG Sbjct: 24 PIHRLTKDVINQIAAAEIIHRPSNAIKELLENSLDAGSTSIKISVKDGGLKLLQITDNGH 83 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R+ TSK+ +D ++ T+GFRGEAL SI SH+ ++++ G Sbjct: 84 GINKDDLPLLCERYATSKLQKFEDLQSLGTYGFRGEALASISYCSHVEVVTKTKNEGCGW 143 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + + +P A N GT++ DLF+ +P R KS E N I DV Sbjct: 144 KAHYQDGSLIPAKPGGTADPKPAAANDGTVITAADLFYNMPLRKRAFKSTSDEYNRIIDV 203 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + + AI P V++ + + Q N I+ + N +E+ E + Sbjct: 204 VTKYAIHNPHVAWVCKKAGTALPDVATQVG-SNTKANIAALYTSALANELLEIPESELQP 262 Query: 231 ----ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 L+G+ + + +FIN R V + + Y +P G P L Sbjct: 263 ARLGAKLKGWVSNANSSWSKKGGWLLFINNRLVDSNKLKKAVEGHYTSYLPKGASPWAYL 322 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH 346 L+IDP ++DVNVHP KS +RF N I + ++Q++Q A+ +S S + + + Sbjct: 323 SLQIDPAKIDVNVHPTKSEVRFLNEDEIVDAVVQAVQTALEGANLSRSFTVQTLLPGAPT 382 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND---PVEESEATH 403 ++ A++ +T++ + R+ ++ T + + VE+ E Sbjct: 383 PLGKRESSNSTIASASFSTRKAAPNYKVRMDPSNRTLDSMFTVIDPSQLSGFVEDGELQE 442 Query: 404 YQLGIACAQIHQNYI 418 + + + Sbjct: 443 QERPSKRRNVDPEFQ 457 >gi|302148833|pdb|3NA3|A Chain A, Mutl Protein Homolog 1 Isoform 1 From Homo Sapiens Length = 348 Score = 314 bits (804), Expect = 3e-83, Method: Composition-based stats. Identities = 106/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 9 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 68 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 69 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 128 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R ++ Sbjct: 129 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 188 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + I + G +E+ + + GY Sbjct: 189 AGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYI 247 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 248 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 306 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 307 NVHPTKHEVHFLHEESILERVQQHIESKL 335 >gi|291399797|ref|XP_002716213.1| PREDICTED: MutL protein homolog 1 [Oryctolagus cuniculus] Length = 758 Score = 314 bits (804), Expect = 3e-83, Method: Composition-based stats. Identities = 108/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTSDGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + I + G +E+ + + GY Sbjct: 188 SGISFSVKKQGETVADVRTLPG-ATTVDNIRSIFGNAVSRELIEVGCEDPTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLKKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEESILARVQQHIESKL 334 >gi|283851832|ref|ZP_06369109.1| DNA mismatch repair protein MutL [Desulfovibrio sp. FW1012B] gi|283572748|gb|EFC20731.1| DNA mismatch repair protein MutL [Desulfovibrio sp. FW1012B] Length = 655 Score = 314 bits (804), Expect = 3e-83, Method: Composition-based stats. Identities = 137/364 (37%), Positives = 204/364 (56%), Gaps = 12/364 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GGG++ + D+G+ Sbjct: 9 TIRVLPPELQNQIAAGEVVERPASVLKELVENSLDAGAARIDVAIEGGGRTLLSVADDGW 68 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT EE+P+AV RH TSKI+ + ++I +FGFRGEALPSI +VS TL SR + GA Sbjct: 69 GMTPEELPLAVTRHATSKIASMAELASIASFGFRGEALPSIASVSTFTLTSRHEAFDEGA 128 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + +I P A+ GT +EVRDLF +PARL FLKSE ET TDV R A+A Sbjct: 129 IIKVESGRIVERGPAALAKGTRIEVRDLFAAVPARLKFLKSEPTETKRATDVFCRTALAR 188 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V+ S + R+S + ++ E++ I + G G Sbjct: 189 LDVAMKLSVGGKTSLRFPA---GQTLLARLSGIWPPAVTDDLFEVDYALGPIRVHGILGK 245 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + A++ ++NGR V D+ +L+ +R AY + YP VL LEI P +DVNV Sbjct: 246 PLKAQAKADRMLFYVNGRAVLDRVLLAAVREAYKGRLLSREYPQAVLFLEIPPEDLDVNV 305 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ +RFR+ + + +++ +A++K L + + + PK+A Sbjct: 306 HPAKTEVRFRDEQAVFVNLRRAVGQALDKN-------LVLRTVPAPEPWVRQDAEGPKFA 358 Query: 360 TSLT 363 + L Sbjct: 359 SRLD 362 Score = 136 bits (343), Expect = 9e-30, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 96/247 (38%), Gaps = 15/247 (6%) Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 + + P L + ++ R + VEE E Sbjct: 422 PHVAEGAPPVRQAPLRHPDPPAVVRHERGEEAAGPAPEILRAR----TVEELEPALPPGV 477 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 Q Y+I LV+VDQHAAHER++F M + + + S+ + P + L Sbjct: 478 RYLGQFADTYLIVDLGRELVLVDQHAAHERILFAAM--EASGHRGHSRPVGIPVEVPLHA 535 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 E A + E +L +G E P +A+ P LS + L + + Sbjct: 536 SEAARLRELFPELRAMGFVLETPRPGLVAMTGAPPALSVGQAREYLSAALA-----GQSK 590 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 TL ++ M+C ++++G + E LL + K P+ C HGRP ++ + Sbjct: 591 TL----RDLWILMSCKTAVKAGTPLADDEAVALLAQWAKAPDRDYCPHGRPVTVRFGPRE 646 Query: 588 IEKLFGR 594 +EK+F R Sbjct: 647 MEKMFKR 653 >gi|22300008|ref|NP_683255.1| DNA mismatch repair protein [Thermosynechococcus elongatus BP-1] gi|22296193|dbj|BAC10017.1| DNA mismatch repair protein [Thermosynechococcus elongatus BP-1] Length = 541 Score = 314 bits (804), Expect = 3e-83, Method: Composition-based stats. Identities = 124/598 (20%), Positives = 241/598 (40%), Gaps = 83/598 (13%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 L ++ IAA E ++ + +EL+EN+LDA +SR+ ++TDNG G+ Sbjct: 9 PLPLEMQRAIAAAETLDSLATVAQELVENALDAGASRIHLH-WHPSAWHLEVTDNGEGIR 67 Query: 65 SEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 ++ + +SK+ S ++I T GFRG+AL S+ ++ LT+ SR + +G Q++ Sbjct: 68 GADLTQVALPYTSSKLPASGQLADITTLGFRGQALHSLAQMAQLTICSRHREAESGWQVS 127 Query: 123 ISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 ++ S RP+ M GT V +F P R +Q + ++++A+ +P+ Sbjct: 128 YDAHGQVRSQRPLGMAVGTRVIAEHIFQDWPQRQQGANPKQ-----LQQRLQQIALCFPQ 182 Query: 182 VSFTFSTIKSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V++ ++ + + I Q+ +D + + ++ P Sbjct: 183 VAWYLLKEGKRWCHWPAVASLSDRLLQLIPQLHPQDL--------RQMRDAQIELVLAPP 234 Query: 241 TFNRGNA-NQFYVFINGRTVQ---DKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 + + V +NGR V+ D I A+ +P R+P+ + L + P +D Sbjct: 235 DRHHRPRPDGLGVAVNGRWVELHSDPSWQQVILEAFGRGLPRQRFPLCIAHLHLPPGAID 294 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 + P K I R P + +++ I + + S +++ + +T L Sbjct: 295 WSAEPQKRRIYLREPEQWQALLVERIGQLLACPATPLRDASSYQVLKAAEPAARYRTLLS 354 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 L+ Q+H Sbjct: 355 TNGAQLSLPP----------------------------------------LKVVGQLHNT 374 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 YII + +G+ +++QH AHER+++E++ D+ + ++ LL +L Sbjct: 375 YIIVEHAEGIWLIEQHIAHERVLYEQIETDWQAVELEQPVLL-----------KSLTETQ 423 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 + G+ FG A+R +P +L + D++ +I+ S L + Sbjct: 424 VQRFQDWGLGIAPFGVQLWAVRRVPGLLRDR------PDLVAALIELSQVTDLSAAKVAV 477 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC +IR+G + EM L+ + + C HGRP ++L+ S + + F R Sbjct: 478 ----ACRSAIRNGTPLTLAEMQTLVDQWYRCRQPHTCPHGRPICLQLQESSLARFFRR 531 >gi|218886821|ref|YP_002436142.1| DNA mismatch repair protein MutL [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757775|gb|ACL08674.1| DNA mismatch repair protein MutL [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 763 Score = 314 bits (804), Expect = 3e-83, Method: Composition-based stats. Identities = 120/400 (30%), Positives = 202/400 (50%), Gaps = 12/400 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L + NQIAAGE++ERP+ +KEL+ENSLDA ++ VE + GG+S + D+G Sbjct: 36 RIQVLPTDLRNQIAAGEVVERPASVVKELVENSLDAGATTVEVTLDNGGQSLIMVRDDGT 95 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN--- 116 G+ +EE+ +AV RH TSK+++ + + I +FGFRGEALPSI +VS + S P + Sbjct: 96 GIPAEELELAVTRHATSKVANLAELARIGSFGFRGEALPSIASVSRFRMTSAPVAPDGTP 155 Query: 117 -TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 I ++ + S P A++ GTIVEVRDLF +PARL FLK++ E ++ R+ Sbjct: 156 GEATCIEVAHGHVVSAGPAALHRGTIVEVRDLFANVPARLKFLKTQATELKRAQELFARL 215 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A+ P V+FT S + R++ + ++ + ++ I + G Sbjct: 216 ALTRPDVAFTLSAGGREVLRFPA---GQTLARRLAVLWPPAVVDTLHPFDRMTDGIRVHG 272 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 T P + ++ +++NGR V D+ +L +R AY + YP + L L+IDP +V Sbjct: 273 LTADPRGAQPRPDRMLLYVNGRAVNDRLLLKAVREAYKGRLLAREYPQLALFLDIDPEEV 332 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS---SFHQDNAPK 352 DVNVHPAK+ +RFR+ + +++++ +++++ + + + F Sbjct: 333 DVNVHPAKNEVRFRDERAVFVAVLRALGESLDRMPAMGAGDEAAGALPGQNPFAVGGQQP 392 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 + N S D + Sbjct: 393 GGWRTGEHGQFGQASQPHAAGNNPSAPDAPRREARPLGFW 432 Score = 145 bits (365), Expect = 3e-32, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 92/247 (37%), Gaps = 12/247 (4%) Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 + A P + + S D P D + + E Sbjct: 527 EEAGLAASPGLLADGSRPFTDADAPTAQTSPPDFPPPDFTPPNSITEDTREGGVRIGDYT 586 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 ++ + D L++VDQHAAHE ++ E++R+ + L L Sbjct: 587 YLGQIADTYLVLRRGRDTLLLVDQHAAHECVLHERIRRRGTAGGGQFLALPVELP--LHP 644 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 E + E DL LG E G + R +PA+L + LR+ + Sbjct: 645 AEAERLHELRPDLEALGFALETTGA-TVRARAVPALLDRSEAAAFLREAVA--------- 694 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 ++ + A MAC G+I++G+++ E L+ + P C HGRP + + Sbjct: 695 GRTSSLDALWAMMACKGAIKAGQRLTPDEAAGLVAQWLATPGRDFCPHGRPAVLTFTPGE 754 Query: 588 IEKLFGR 594 +E++F R Sbjct: 755 MERMFKR 761 >gi|296414329|ref|XP_002836854.1| hypothetical protein [Tuber melanosporum Mel28] gi|295632695|emb|CAZ81045.1| unnamed protein product [Tuber melanosporum] Length = 693 Score = 313 bits (803), Expect = 4e-83, Method: Composition-based stats. Identities = 132/547 (24%), Positives = 232/547 (42%), Gaps = 41/547 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L + ++N+IAAGEII P A+KELIENS+DA S+ ++ ++ GG QI+DNG Sbjct: 31 RIKPLDQVVVNKIAAGEIIVAPVHALKELIENSVDAGSTSIDILVKDGGLKLLQISDNGH 90 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+ +D +I T+GFRGEAL SI ++HLT+ +R + G Sbjct: 91 GIDENDLPILCERFTTSKLQSFEDLQSIGTYGFRGEALASISHIAHLTITTRTANSPIGL 150 Query: 120 QIAISGEKIS--------SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ + +PV N GT + V DLF+ +P+R +S E I D+ Sbjct: 151 RATYSDSKLITPKPGQPANPKPVHRNKGTQITVEDLFYNVPSRRRAFRSPSEEYAKILDL 210 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + R A+ V+F+ ++ + +RI ++ G N + + Sbjct: 211 VGRYAVHCGGVAFSCKKYGDPDVGVSTTAG-ATTTDRIRRIHGNAVANELLPFEVSDDYL 269 Query: 231 -ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 +G ++ +FIN R+V I I + YA +P G +P + L+ Sbjct: 270 GFKAKGMLSNANYH-VKKTTLLLFINNRSVDSSSIRKGIESTYAPFLPKGGHPFAYMSLD 328 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH--Q 347 I+P +VDVNVHP K + F + I + +S+Q+ + S S L++ ++ S Sbjct: 329 IEPHRVDVNVHPTKREVNFLHEEEIVQKLCESLQEKLAAVDTSRSYALTQALLPSAKAVP 388 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE--------S 399 DN+ S ++ + + + + + + D + ++ + Sbjct: 389 DNSSGQKAAARTASRAEESKQPLVAKPKKTYDYNMVRADTRDRKITTMLQPKSQKEDRTA 448 Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 E Y+ Y + V +H + + E + Q L Sbjct: 449 EGDEYEYDDNRQWTSVKYQTIKKLRKAVWDTKH----KDLCELFHNHTFVGIVDEQRRLA 504 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGP-NAIAIREIPAILSKKNIPQLLRDIID 518 L E +++G F I + N P L+DI++ Sbjct: 505 SVQHGLKLYLIDYAAAAFELFYQIG--LSDFSNYGTIRL----------NPPLALKDILE 552 Query: 519 EIIDSST 525 I+ Sbjct: 553 IAIEDEK 559 >gi|301167944|emb|CBW27530.1| putative DNA mismatch repair protein [Bacteriovorax marinus SJ] Length = 574 Score = 313 bits (803), Expect = 4e-83, Method: Composition-based stats. Identities = 156/605 (25%), Positives = 264/605 (43%), Gaps = 52/605 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L E +I+QI AGE+IERP+ +KEL+ENSLDA S+ ++ I G I DNG Sbjct: 9 KINLLPEHLIDQIKAGEVIERPASLVKELLENSLDANSTNIKISIIENGLELISIEDNGD 68 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT-- 117 G+ E++P A RH TSKI +D N+++FGFRGEAL S+ A+S +T S P N Sbjct: 69 GILFEDLPYAFCRHATSKIERFEDIYNLYSFGFRGEALASMAAISRITCSSTPIDNPEQG 128 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + +++S + GT + ++DLFF PARL F+KS+ E N I VI + Sbjct: 129 GKIVIHGAKEMSHTPLASRKQGTSIFIKDLFFNTPARLKFIKSKTSEKNAIKRVINAFIL 188 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 PKV F+ ++ +RI ++I N E + +++G Sbjct: 189 TNPKVQFSVKWDDKDKNIFKPVEDT-RLADRIREIILPKNSPNKELYEFEGEYEGHSVRG 247 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 + T Y+F+NGR D+ I +I + P G ++L + P QV Sbjct: 248 FASAHTSKGNAGKSQYLFVNGRLFTDRQIHQSILRTMEKVWPFGETGHYCVMLNVPPTQV 307 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHP K+ ++F I+ + + SI+K I + +F ++ AP+ L Sbjct: 308 DVNVHPNKTQVKFFKANIVFSLVSASIKKFIEE---------------NFKEEVAPQNEL 352 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 +E+ ++ + + S ++ + +++++ Sbjct: 353 FNR----DQAKEQSVQMFSQSPFSTYSEQSNHPVSYGPSSRVLPTLSNTESATFLSRLNE 408 Query: 416 NYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Y++ + ++D A + + ++++ + + LL E L I Sbjct: 409 RYLLLTDENSKKFMIDSFALFIQYWIDNWKENYPYDEAKTTPLLISEPFQL----HQGID 464 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 + L LG++ ++ + A+R IP NI ++L DI+ SS D E Sbjct: 465 KLANFLKTLGLELDKLDESTYALRTIPNCFDSFNIREVLSDILTIFQQSSLN---PDNFE 521 Query: 535 NILATMACYGSIR-SGRK---MQSIEMNRLLRE--MEKNPNSSQCNHGRPTFIKLKLSDI 588 +L I+ + +N +L+ + + NS + L + Sbjct: 522 KVLNET-----IKDFNPSQFFLSDYAINYILQRYTLAQALNSKA-------IVNLDNEAL 569 Query: 589 EKLFG 593 EKLF Sbjct: 570 EKLFK 574 >gi|78358503|ref|YP_389952.1| DNA mismatch repair protein MutL [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220908|gb|ABB40257.1| DNA mismatch repair protein MutL [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 692 Score = 313 bits (803), Expect = 4e-83, Method: Composition-based stats. Identities = 132/451 (29%), Positives = 216/451 (47%), Gaps = 23/451 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L + + NQIAAGE++ERPS +KEL+ENSLDA + VE I GG+S + D+G Sbjct: 11 RIQLLPDALRNQIAAGEVVERPSSVVKELVENSLDAGARTVEVAIEDGGRSLITVRDDGD 70 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMS----RPPQN 115 G+ + E+ +AV RH TSK++ D+ I ++GFRGEALPSI +VS + S R + Sbjct: 71 GIDAAELELAVTRHATSKVTTFDELMRIASYGFRGEALPSIASVSDFRMTSAPAQRTAAD 130 Query: 116 --NTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR 173 + I + I S P A++ GT+VEVRDLF +PARL FLK+ E+ ++ Sbjct: 131 TAPEASCIHVRHGSIISHGPAALSRGTLVEVRDLFMNVPARLKFLKTTATESKRCQELFC 190 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS----- 228 R+A+A P F+ S+ ++ T ER++ + + VE+ Sbjct: 191 RLALARPDAGFSLSSGGREVFRFPAGQTW---RERLAVLWPPSITESMVEVPPLCSRAHD 247 Query: 229 ---NEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVV 285 ++ ++G G P ++ A++ ++NGR V DK ++ +R AY+ + YP V+ Sbjct: 248 GTVPDVQVRGLCGDPRQSQPRADKMLFYVNGRAVTDKLLMRAVRDAYSGRMLGREYPQVL 307 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF 345 L +E+DP VDVNVHPAKS +RFR + + + ++++ A+ + S+ + + Sbjct: 308 LFIELDPEMVDVNVHPAKSEVRFREERHVFSAVRRAVEAALQQL----SATGTPDSPDTA 363 Query: 346 HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 + P A + +D E + + Sbjct: 364 GVADIPGHAASGAAGLRLTPDSPATPRAAARPLGFWGEADAAPIVPRAPRDHEDDEVTLR 423 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + ++ TD D H H Sbjct: 424 HMPQPSSADGRTDRTEHTDSAEAPDAHLPHR 454 Score = 150 bits (380), Expect = 5e-34, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 115/284 (40%), Gaps = 24/284 (8%) Query: 323 QKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA-------TSLTNTQEKLFLQENR 375 + + +S+ AP HLP + ++ Sbjct: 419 EVTLRHMPQPSSADGRTDRTEHTDSAEAPDAHLPHRDDGVRIDFMAGGPSRAAGHTDAAV 478 Query: 376 LSTNDLLPSDDPTYSEDNDPVEESEATH----YQLGIACAQIHQNYIISQTTDG-LVIVD 430 D +S ++ H QI Y++ + L+++D Sbjct: 479 AEQPDAEYGHAAPHSTPQPAGAPADPAHGGVTVGEYTYLGQIADTYLVVRRKGSTLLLLD 538 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHA HER+++E++R+D +Q L P + L E + E L +G E Sbjct: 539 QHAVHERVLYERIRRDATQG--QTQLLAFPAEMPLHNAEAERLASVWEKLAAMGFALETH 596 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 GP ++ IR IP+ L ++ + LR+++ + + R+ ++ M+C +I++G+ Sbjct: 597 GP-SLRIRGIPSTLDQRGATEFLREVLAD---------RKGRLPDMWVMMSCRSAIKAGQ 646 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ E L+ + + P+ C HGRP ++ +D+EK+F R Sbjct: 647 RLTPDEAAGLIAQWLEVPDREFCPHGRPAVLRFTPADLEKMFKR 690 >gi|296228349|ref|XP_002759776.1| PREDICTED: DNA mismatch repair protein Mlh1 [Callithrix jacchus] Length = 758 Score = 313 bits (803), Expect = 4e-83, Method: Composition-based stats. Identities = 108/329 (32%), Positives = 170/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + + I + G +E+ + + GY Sbjct: 188 SGISFSVKKQGETVADVRTLPSASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFRMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKL 334 >gi|220905580|ref|YP_002480892.1| DNA mismatch repair protein MutL [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869879|gb|ACL50214.1| DNA mismatch repair protein MutL [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 739 Score = 313 bits (803), Expect = 4e-83, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 195/347 (56%), Gaps = 8/347 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA++ +++ + GG+S + D+G G Sbjct: 18 IRLLPPELRNQIAAGEVVERPASVLKELVENSLDAQAGQIDVCLENGGQSRISVQDDGRG 77 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSR---PPQNNT 117 + +E++ MAV RH TSKI +D I ++GFRGEALPSI +VS T+ S Sbjct: 78 IPAEDLEMAVTRHATSKIRCLEDLERILSYGFRGEALPSIASVSRFTITSASQDAAGQAA 137 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 ++ + + S P A++ GT+VEVRDLF IPARL FLK+ E D + R+A+ Sbjct: 138 AHRVEVEHGLLKSSGPAALHKGTLVEVRDLFSNIPARLKFLKTPSTEFRRAQDWLARLAL 197 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P+V F + + + ER++ + ++ + + + I G Sbjct: 198 TRPQVGFCLYSGEREALRFL---PGQTLAERLAVLWPRLIVDALRPFDGRRHGIRAHGLA 254 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 +P ++ ++ +++NGR+V DK +L+ +R AY + YP + L +E+DP +VDV Sbjct: 255 ALPNVSQPRGDRILLYVNGRSVTDKRLLAAVRQAYKGRMTSRDYPQIALFVEMDPAEVDV 314 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 NVHPAKS +RFR+ + + + ++ ++Q A+ + + + Sbjct: 315 NVHPAKSEVRFRDESAVFSAVLHAVQGALVTSFDVAEAAWHEGATPA 361 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 13/190 (6%) Query: 406 LGIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 Q+ Y++ + DG L+++DQHAAHER+++ +MR+ + L + Sbjct: 559 NMEYLGQVANTYLVLRDRDGALILLDQHAAHERVLYTRMRRGGFAGSGQLLALPLELSLH 618 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 E + E E+L LG E G + +R +P +LS+ LR+ + Sbjct: 619 --PAERERLFELRENLESLGFVFESSGAG-LEVRGMPPVLSRAEARDFLREALA------ 669 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 +D + + +M+C +I++G+++ E LLR+ P+ C HGRP ++ Sbjct: 670 ---GRKDDLAGMFISMSCKAAIKAGQRLTDDEAAGLLRQWLAAPDREYCPHGRPCVLRWD 726 Query: 585 LSDIEKLFGR 594 ++EK+F R Sbjct: 727 GPELEKMFKR 736 >gi|241558624|ref|XP_002400269.1| DNA mismatch repair protein mlh1, putative [Ixodes scapularis] gi|215499751|gb|EEC09245.1| DNA mismatch repair protein mlh1, putative [Ixodes scapularis] Length = 668 Score = 313 bits (803), Expect = 5e-83, Method: Composition-based stats. Identities = 121/493 (24%), Positives = 227/493 (46%), Gaps = 48/493 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR+L E + N+IAAGE+I+RP+ A+KE++ENS+DA ++ ++ V GG QI DNG Sbjct: 9 KIRRLDETVTNRIAAGEVIQRPANALKEMLENSIDARATNIQVVAKAGGLKLLQIQDNGC 68 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +R TSK+ +D + I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 69 GIRKEDLDIVCERFTTSKLVKFEDLATISTYGFRGEALASISYVAHVTITTKTADSQCAF 128 Query: 120 QIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ K + +P A N GT + V DLF+ +P R N KS E + DV+ R A+ Sbjct: 129 KVSYRSGKPTGPPKPCAGNQGTQIVVEDLFYNVPTRKNAFKSPAEEYGRLVDVVSRYAVH 188 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGY 236 V F+ + + + + + + + I+ + G+ + + + + + L+G+ Sbjct: 189 NAGVGFSIKKAEESATDVRT-TVDDDTLQSIATIYGKTVSRDLLPVECDNPDLKFRLKGF 247 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 + +FIN R V+ + I + YA +P +P + L LEI P VD Sbjct: 248 VSNANCSYKKCT-LLLFINHRLVESSSLRKAIESIYASYLPKNAHPWLYLSLEIHPANVD 306 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---------------------- 334 VNVHP K + F + +I + +++ A+ S + Sbjct: 307 VNVHPTKKEVHFLHEDLILEAVQKAVDGALLACNSSRTYLTQSRLPQINVTSKASVAAKK 366 Query: 335 ---------------SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTN 379 + + + +F P T + T++Q K+ ++ R+ Sbjct: 367 ADGSAPVVDERHLVRTDSHLQKLDTFLTTARPSTSALGTPENATSSQSKVAEEQPRIKLQ 426 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 + + ++ + + + H +G ++Q + + Q L +V+ E L Sbjct: 427 SVQALWNQVMAKSHQGLHDLFRNHTFVGC----VNQRFSLVQHQTELYLVNTRKVTEELF 482 Query: 440 FEKMRQDFNSTKI 452 ++ M ++F + + Sbjct: 483 YQIMLKNFGNFSV 495 >gi|303314257|ref|XP_003067137.1| DNA mismatch repair protein MutL family protein [Coccidioides posadasii C735 delta SOWgp] gi|240106805|gb|EER24992.1| DNA mismatch repair protein MutL family protein [Coccidioides posadasii C735 delta SOWgp] Length = 777 Score = 313 bits (802), Expect = 5e-83, Method: Composition-based stats. Identities = 114/408 (27%), Positives = 193/408 (47%), Gaps = 15/408 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L ++N+IAAGEII P A+KELIENS+DA + VE ++ GG QITDNG Sbjct: 28 KIQALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGARAVEILVKDGGLKLLQITDNGH 87 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ SE++P+ +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 88 GIDSEDLPILCERFTTSKLKAFEDLSSIATYGFRGEALASISHIAHLTVTTKTAGSSCAW 147 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + K+ +P A GT + V DLF+ +P R +S E I D+ Sbjct: 148 RAHYRDGKLVPAKPGQSAEPKPTAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDI 207 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN-- 229 + R A+ VSF+ + ++ N + +RI Q+ G N + + + + Sbjct: 208 VGRYAVHCNGVSFSCKKHGDSGVSVST-PVNSSTIDRIRQIHGSAVANELIPFDVEDSAL 266 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 G+ ++ +FIN R+V+ I + Y+ +P G +P L +E Sbjct: 267 GFRASGFASNANYH-AKRTVILLFINHRSVESSGIRKAMEQTYSAFLPKGGHPFAYLNIE 325 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P +VDVNVHP K + F N I I +++ + S+ + +++ ++ H+ Sbjct: 326 IEPHRVDVNVHPTKREVNFLNEDEIIELICNAVRTKLANVD-SSRTFMTQTLLPGIHRSG 384 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 P ++ + ++ + L D + Sbjct: 385 TPPADTSSPRATIEGKVPLRTVAGSKRPYENNLVRTDVKMRKITSMFP 432 >gi|332215524|ref|XP_003256894.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 1 [Nomascus leucogenys] Length = 756 Score = 313 bits (802), Expect = 5e-83, Method: Composition-based stats. Identities = 107/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + I + G +E+ + + GY Sbjct: 188 AGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKL 334 >gi|239906400|ref|YP_002953141.1| DNA mismatch repair protein MutL [Desulfovibrio magneticus RS-1] gi|239796266|dbj|BAH75255.1| DNA mismatch repair protein MutL [Desulfovibrio magneticus RS-1] Length = 734 Score = 313 bits (802), Expect = 5e-83, Method: Composition-based stats. Identities = 135/368 (36%), Positives = 206/368 (55%), Gaps = 12/368 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L ++ NQIAAGE++ERP+ +KEL+ENSLDA +SR+E I GGG++ ++D+G Sbjct: 9 TIRVLPPELQNQIAAGEVVERPASVLKELVENSLDAGASRIEAAIDGGGRTAVIVSDDGG 68 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GMT EE+P+A+ RH TSKI+ D+ I +FGFRGEALPSI +VS + SR GA Sbjct: 69 GMTPEELPLALTRHATSKIASIDELERIGSFGFRGEALPSIASVSRFRISSRHEAFEEGA 128 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A+ +++ P A+ GT +EVRDLF +PARL FLKSE VET T++ R A+A Sbjct: 129 FVAVENGRLTERGPAAVAQGTRIEVRDLFAAVPARLKFLKSEAVETKRATELFCRAALAR 188 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 V+F + + P R++ + E + + + G G Sbjct: 189 LDVAFKLTVGGRTALRFPA---GQTLPARLAAFWPPAVTEDLFEFSSDAAGAKVHGVLGK 245 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P +G A++ Y ++NGR V D+ +L+ +R AY + YP V+ LE+DP +DVNV Sbjct: 246 PLRAQGKADRMYFYVNGRPVLDRVLLAAVREAYKGRLLAREYPQAVIFLELDPADLDVNV 305 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HPAK+ +RFR+ + + +++ A++K L + + + PK+A Sbjct: 306 HPAKTEVRFRDEQAVFLTLRRAVGAALDK-------ALVHRTVPAPEPWVKAGAEPPKFA 358 Query: 360 TSLTNTQE 367 + +E Sbjct: 359 SRRDFFEE 366 Score = 140 bits (353), Expect = 6e-31, Method: Composition-based stats. Identities = 54/262 (20%), Positives = 98/262 (37%), Gaps = 11/262 (4%) Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 ++ ++ + + + + + Sbjct: 482 SAQPADQEAYPARPSGYGVAEAPAQRQGPARHFDPPAVARRAAAEAALENDGAEAGAPLY 541 Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 V+E E Q Y+I T + LV+VDQHAAHER+I+ ++ + Sbjct: 542 ARTVDELEPALPPDMRYLGQFDDTYLIVDTGEELVLVDQHAAHERVIYAA--REAAGRRG 599 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 S+ L P + L E A + +L +G + P AI P L+ + Sbjct: 600 HSRPLGMPVELTLHPSEQARLQTLFTELRSMGFVVDTPRPGMAAITGAPPELTVGQAKEY 659 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 LR + + +LQD + M+C +I++G ++ + E LL + P+ Sbjct: 660 LRAALA-----GQSKSLQD----LWILMSCKTAIKAGTRLTADEAVALLSQWATVPDRDY 710 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGRP ++ ++EK+F R Sbjct: 711 CPHGRPVTVRFGRREMEKMFKR 732 >gi|114585970|ref|XP_001170338.1| PREDICTED: MutL protein homolog 1 isoform 4 [Pan troglodytes] Length = 633 Score = 313 bits (801), Expect = 6e-83, Method: Composition-based stats. Identities = 107/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + I + G +E+ + + GY Sbjct: 188 AGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKL 334 >gi|466462|gb|AAA17374.1| human homolog of E. coli mutL gene product, Swiss-Prot Accession Number P23367 [Homo sapiens] gi|261858940|dbj|BAI45992.1| mutL homolog 1, colon cancer, nonpolyposis type 2 [synthetic construct] Length = 756 Score = 313 bits (801), Expect = 6e-83, Method: Composition-based stats. Identities = 107/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R ++ Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + I V G +E+ + + GY Sbjct: 188 AGISFSVKKQGETVADVRTLPNASTV-DNIRSVFGNAVSRELIEIGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKL 334 >gi|189069159|dbj|BAG35497.1| unnamed protein product [Homo sapiens] Length = 756 Score = 313 bits (801), Expect = 6e-83, Method: Composition-based stats. Identities = 106/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R ++ Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + I + G +E+ + + GY Sbjct: 188 AGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKL 334 >gi|48476966|gb|AAT44531.1| hypothetical rhabdomyosarcoma antigen MU-RMS-40.5 [Homo sapiens] Length = 755 Score = 313 bits (801), Expect = 7e-83, Method: Composition-based stats. Identities = 106/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 7 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 66 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 67 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 126 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R ++ Sbjct: 127 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + I + G +E+ + + GY Sbjct: 187 AGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYI 245 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 246 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 304 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 305 NVHPTKHEVHFLHEESILERVQQHIESKL 333 >gi|604369|gb|AAA85687.1| hMLH1 [Homo sapiens] Length = 752 Score = 313 bits (801), Expect = 7e-83, Method: Composition-based stats. Identities = 106/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R ++ Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + I + G +E+ + + GY Sbjct: 188 AGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKL 334 >gi|33303773|gb|AAQ02400.1| mutL-like 1, colon cancer, nonpolyposis type 2 [synthetic construct] Length = 757 Score = 313 bits (801), Expect = 7e-83, Method: Composition-based stats. Identities = 106/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R ++ Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + I + G +E+ + + GY Sbjct: 188 AGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKL 334 >gi|4557757|ref|NP_000240.1| DNA mismatch repair protein Mlh1 isoform 1 [Homo sapiens] gi|730028|sp|P40692|MLH1_HUMAN RecName: Full=DNA mismatch repair protein Mlh1; AltName: Full=MutL protein homolog 1 gi|463989|gb|AAC50285.1| DNA mismatch repair protein homolog [Homo sapiens] gi|1079787|gb|AAA82079.1| DNA mismatch repair protein homolog [Homo sapiens] gi|13905126|gb|AAH06850.1| MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Homo sapiens] gi|27805155|gb|AAO22994.1| mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Homo sapiens] gi|119584889|gb|EAW64485.1| mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli), isoform CRA_b [Homo sapiens] gi|157928134|gb|ABW03363.1| mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [synthetic construct] gi|157928839|gb|ABW03705.1| mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [synthetic construct] gi|741682|prf||2007430A DNA mismatch repair protein Length = 756 Score = 313 bits (801), Expect = 7e-83, Method: Composition-based stats. Identities = 106/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R ++ Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + I + G +E+ + + GY Sbjct: 188 AGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKL 334 >gi|330933250|ref|XP_003304105.1| hypothetical protein PTT_16542 [Pyrenophora teres f. teres 0-1] gi|311319518|gb|EFQ87802.1| hypothetical protein PTT_16542 [Pyrenophora teres f. teres 0-1] Length = 734 Score = 312 bits (800), Expect = 8e-83, Method: Composition-based stats. Identities = 118/387 (30%), Positives = 196/387 (50%), Gaps = 13/387 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L++ ++N+IAAGEII P A+KELIEN++DA S+ +E ++ GG QITDNG Sbjct: 30 RIKALAQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTALEILVKDGGLKLLQITDNGH 89 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +R TSK+ +D ++I T+GFRGEAL SI ++HL + +R +++ Sbjct: 90 GIDKEDLPILCERFTTSKLKAFEDLTSIGTYGFRGEALASISHIAHLKVTTRTKESSCAW 149 Query: 120 QIAISGEKISSVRPVA--------MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + + K+SS +P GTI+ V DLF+ +P+R +S E I ++ Sbjct: 150 EAHFADGKLSSPKPGQTAEPKPKAGRQGTIITVEDLFYNVPSRRRAFRSASEEYAKILEL 209 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--SN 229 + R A+ V+F+ + N + +RI Q+ G N VELN + Sbjct: 210 VGRYAVHCEGVAFSCKKMGENSSNSVTVPAAASAKDRIRQIHGSSAANELVELNVEDDRW 269 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 +G+ ++ Q +FIN R+V+ I ++ YA +P G +P L LE Sbjct: 270 GFKCKGWVSSANYS-AKRTQMLLFINHRSVESPIIKKSVEQTYATFLPKGGHPFFYLSLE 328 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P++VDVNVHP K + F N I + SI+ ++K S S + + + Sbjct: 329 IEPQRVDVNVHPTKREVHFLNEDEIIAVVCDSIRDNLSKVDTSRSFMTQSLLSNPKVPFA 388 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRL 376 P +T + + ++ Sbjct: 389 TPMKPTVPATPGTGDTSNRSVSRAPQI 415 >gi|114585968|ref|XP_001170371.1| PREDICTED: MutL protein homolog 1 isoform 5 [Pan troglodytes] Length = 687 Score = 312 bits (800), Expect = 9e-83, Method: Composition-based stats. Identities = 107/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + I + G +E+ + + GY Sbjct: 188 AGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKL 334 >gi|18255308|gb|AAH21815.1| MutL homolog 1 (E. coli) [Mus musculus] Length = 760 Score = 312 bits (800), Expect = 9e-83, Method: Composition-based stats. Identities = 114/369 (30%), Positives = 183/369 (49%), Gaps = 10/369 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT++ V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +S + + N + I + G +E+ + + GY Sbjct: 188 SGISISVKKQGETVSDVRTLP-NATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMISSFHQDNAPKTH 354 NVHP K + F + I + Q I+ + N + + L + + P T Sbjct: 306 NVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEAARPTTG 365 Query: 355 LPKYATSLT 363 + +TS + Sbjct: 366 VASSSTSGS 374 >gi|119478992|ref|XP_001259525.1| DNA mismatch repair protein Mlh1, putative [Neosartorya fischeri NRRL 181] gi|119407679|gb|EAW17628.1| DNA mismatch repair protein Mlh1, putative [Neosartorya fischeri NRRL 181] Length = 759 Score = 312 bits (800), Expect = 9e-83, Method: Composition-based stats. Identities = 113/410 (27%), Positives = 190/410 (46%), Gaps = 14/410 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L ++N+IAAGEII P A+KELIEN++DA S+ +E ++ GG QITDNG Sbjct: 30 RIRPLDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEVLVKDGGLKLLQITDNGH 89 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 90 GIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAW 149 Query: 120 QIAISGEKISSVRPVAMNP--------GTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ +P GT + V DLF+ +P R +S E I DV Sbjct: 150 RAHYSDGKLVPPKPGQSAAPKATAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDV 209 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + R A+ ++F+ + ++ N +RI Q+ G N VE + ++ Sbjct: 210 VGRYAVHCSGIAFSCRKHGESGAGIST-PAAANTVDRIRQIHGSAVANELVEFQIEDSKL 268 Query: 231 -ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 G ++ +FIN R+V+ I + Y+ +P G +P V + LE Sbjct: 269 GFRSSGLVTNANYH-VKRTTILLFINHRSVESTAIKRAVEQTYSSFLPKGGHPFVYIDLE 327 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P++VDVNVHP K + F N I I I+ + + S + + + + Sbjct: 328 IEPQRVDVNVHPTKREVNFLNEDEIIECICDEIRSKLARVDSSRTFLTQTLLPGVTTIEP 387 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 + + + + Q + L D + + + Sbjct: 388 LNRNNPAAGPSIEGDGQVPRTPAPTKKPYEHSLVRTDSRVRKITSMLPPA 437 >gi|114585958|ref|XP_001170274.1| PREDICTED: MutL protein homolog 1 isoform 3 [Pan troglodytes] gi|114585960|ref|XP_001170433.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 8 [Pan troglodytes] Length = 756 Score = 312 bits (800), Expect = 9e-83, Method: Composition-based stats. Identities = 107/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + I + G +E+ + + GY Sbjct: 188 AGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKL 334 >gi|83772756|dbj|BAE62884.1| unnamed protein product [Aspergillus oryzae] Length = 734 Score = 312 bits (800), Expect = 9e-83, Method: Composition-based stats. Identities = 116/380 (30%), Positives = 185/380 (48%), Gaps = 16/380 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L ++N+IAAGEII P A+KELIEN++DA S+ +E ++ GG QITDNG Sbjct: 30 RIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSLEILVKDGGLKLLQITDNGH 89 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 90 GIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAW 149 Query: 120 QIAISGEKISSVRP--------VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ + +P A GT + V DLF+ +P R +S E I DV Sbjct: 150 RAHYSNGKLVAPKPGQPAAPKATAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDV 209 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + R A+ V+F+ + ++ N +RI Q+ G N VE + + Sbjct: 210 VGRYAVHCSGVAFSCRKHGDSGVSIST-PVTANTIDRIRQIHGSAVANELVEFKSEDRKL 268 Query: 231 -ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 GY ++ +FIN R+V+ + I Y+ +P G +P + LE Sbjct: 269 GFRSSGYVTNANYH-VKRTVILLFINHRSVESTAVKRAIEQTYSSFLPKGGHPFAYIDLE 327 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P +VDVNVHP K + F N I I Q I+ + + +S + + + Sbjct: 328 IEPHRVDVNVHPTKREVNFLNEDEIIECICQEIKSNLTQVD--SSRTFLTQTLLPGVRTM 385 Query: 350 APKTHLPKYATSLTNTQEKL 369 P P + T + Sbjct: 386 EPAPRDPDSTDAEGRTPKTP 405 >gi|126336756|ref|XP_001362984.1| PREDICTED: similar to DNA mismatch repair protein homolog isoform 2 [Monodelphis domestica] Length = 745 Score = 312 bits (800), Expect = 1e-82, Method: Composition-based stats. Identities = 113/403 (28%), Positives = 185/403 (45%), Gaps = 7/403 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L EK++N+IAAGE+I+RP+ AIKE+IEN LDA +S ++ + GG Q+ DNG G Sbjct: 8 IRRLDEKVVNRIAAGEVIQRPANAIKEMIENCLDARASAIQVTVREGGLKLIQVQDNGSG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ S+ + + Sbjct: 68 IRREDLDIVCERFTTSKLRAFEDLASIATYGFRGEALASISHVAHVTVTSKTAEAKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ + R LK+ E I DV+ R ++ Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNVATRRKALKNPSEEYGKILDVVGRYSVHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN--EITLQGYT 237 VSF+ + TN + I + G +E+ ++G+ Sbjct: 188 SGVSFSVKKQGETVPDIRTL-TNATVVDNIRSIFGNAVSRELIEVGCDDPLLAFRMKGFI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + + + YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESSALRKAVESVYAAYLPKNSHPFLYLSLEIAPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K + F + I + Q I+ + S + + Sbjct: 306 NVHPTKHEVHFLHEDSILERVQQHIEGRLLGANSSRTYFTQTLLPGMAGPVPEGAKSAVG 365 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 + +++ Q + + D VE E Sbjct: 366 ASAPPPGPSDRVSAQHMVRTDSREQKLDAFLQPVSRSSVERPE 408 >gi|126336754|ref|XP_001362893.1| PREDICTED: similar to DNA mismatch repair protein homolog isoform 1 [Monodelphis domestica] Length = 735 Score = 312 bits (800), Expect = 1e-82, Method: Composition-based stats. Identities = 113/403 (28%), Positives = 185/403 (45%), Gaps = 7/403 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L EK++N+IAAGE+I+RP+ AIKE+IEN LDA +S ++ + GG Q+ DNG G Sbjct: 8 IRRLDEKVVNRIAAGEVIQRPANAIKEMIENCLDARASAIQVTVREGGLKLIQVQDNGSG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ S+ + + Sbjct: 68 IRREDLDIVCERFTTSKLRAFEDLASIATYGFRGEALASISHVAHVTVTSKTAEAKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ + R LK+ E I DV+ R ++ Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNVATRRKALKNPSEEYGKILDVVGRYSVHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN--EITLQGYT 237 VSF+ + TN + I + G +E+ ++G+ Sbjct: 188 SGVSFSVKKQGETVPDIRTL-TNATVVDNIRSIFGNAVSRELIEVGCDDPLLAFRMKGFI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + + + YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESSALRKAVESVYAAYLPKNSHPFLYLSLEIAPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K + F + I + Q I+ + S + + Sbjct: 306 NVHPTKHEVHFLHEDSILERVQQHIEGRLLGANSSRTYFTQTLLPGMAGPVPEGAKSAVG 365 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 + +++ Q + + D VE E Sbjct: 366 ASAPPPGPSDRVSAQHMVRTDSREQKLDAFLQPVSRSSVERPE 408 >gi|261198298|ref|XP_002625551.1| DNA mismatch repair protein [Ajellomyces dermatitidis SLH14081] gi|239595514|gb|EEQ78095.1| DNA mismatch repair protein [Ajellomyces dermatitidis SLH14081] Length = 842 Score = 312 bits (799), Expect = 1e-82, Method: Composition-based stats. Identities = 138/571 (24%), Positives = 240/571 (42%), Gaps = 53/571 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L ++N+IAAGEII P A+KELIENS+DA ++ VE ++ GG QITDNG Sbjct: 32 KIQALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGATSVEILVKDGGLKLLQITDNGH 91 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 92 GIDCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAW 151 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ +P A GT + V DLF+ +P R +S E I DV Sbjct: 152 KAHYSDGKLVPAKPGQTAEPKPTAGRGGTQITVEDLFYNVPTRRRAFRSSSEEYAKILDV 211 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + R A+ V+F+ + ++ S N +RI Q+ G + V + + Sbjct: 212 VGRYAVHCSGVAFSCKKHGDSGVSIST-SMNSTTVDRIRQIHGSAVASELVNFSVEDPRL 270 Query: 231 -ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 G+ ++ +FIN R+V+ + I AY+ +P G +P L LE Sbjct: 271 GFRASGWASNANYH-AKRTTILLFINHRSVESTAVRRAIEQAYSNFLPKGGHPFAYLDLE 329 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P++VDVNVHP K + F N I I +IQ+ + S+ + + + ++ + + Sbjct: 330 IEPQRVDVNVHPTKREVNFLNEDEIIASICTAIQQKLATVD-SSRTFMVQTLLPAGRTRS 388 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 + + + R N+L+ +D + + + + Sbjct: 389 DAMNPNAESPYNDKQPTPRTLSGTKRPYENNLVRTDASMRKITSMLPPATSSQTRPILNG 448 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 +Q DGL R+ ++ + + LT L Sbjct: 449 NSQPQPL-----EEDGLRYESTGREPTRIRLTSVKNLRAAVRSAMHNNLTELFASLTYVG 503 Query: 470 -------------------CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 M +E +++G FG K N+ Sbjct: 504 LVDERRRIAAIQSGVKLFLVDYGMMSNEFFYQIG--LTDFGN-----------FGKINLE 550 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 R ++D + ++ T + R +++ A+ A Sbjct: 551 SSPR-LVDLLSLAAATERDEYRRQHVAASTA 580 >gi|253577911|ref|ZP_04855183.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850229|gb|EES78187.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 663 Score = 312 bits (799), Expect = 1e-82, Method: Composition-based stats. Identities = 125/471 (26%), Positives = 230/471 (48%), Gaps = 17/471 (3%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 ERPS +KEL+EN++DA ++ V I GGK +ITDNG GM +++P+A RH TSKI Sbjct: 2 ERPSSIVKELVENAIDAGATAVTVEITDGGKKMIRITDNGGGMERDQVPLAFLRHATSKI 61 Query: 81 S--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNP 138 +D +I + GFRGEAL SI AV+ + L+++ P +G + I+G S+ + Sbjct: 62 EKVEDLEHIASLGFRGEALSSIAAVAQVELITKTPSALSGVRYVINGGVQESLEDMGAPE 121 Query: 139 GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNF 198 GT VR+LF+ PAR FLKS+ E N ++ ++ ++A+++P++SF + K + Sbjct: 122 GTTFLVRNLFYNTPARSKFLKSDTTEGNYVSTLMEQLALSHPEISFKYIQNKQVKLH--- 178 Query: 199 QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRT 258 S N N + I + G D +E++ +++ + ++G+ G P +RGN +INGR Sbjct: 179 TSGNYNVKDVIYNIYGRDITKALLEVSYENDFMKIEGFVGKPEISRGNRTFENYYINGRF 238 Query: 259 VQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI 318 V+++ I I AY + ++P V L ++++ +DVNVHP+K +RF T + + + Sbjct: 239 VKNRIIAKGIEDAYKGFLMQHKFPFVSLHIQMEGNDLDVNVHPSKMEVRFARGTEVYDAV 298 Query: 319 IQSIQKAINKKGISTSSVL-----SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE 373 +++ KA+ + + + KK + P+ + + + + Sbjct: 299 YETVHKALTTREMIQTVPFGKEEPIKKQQPVVKPGDVPEPFETRRRAEIPEYRPQTVNTA 358 Query: 374 NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD--Q 431 +R+S + LP T +E ++ T L A Q+ + + + + + + Sbjct: 359 SRVSEHTALPRGTVTMAEQAVREQQIYQTRDPLTKAEEQLFEGTLSDKKNEEQPVFSETK 418 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 E+ E ++ +S + + + E + + E Sbjct: 419 QEIAEQKTAEYLKTAVDSEGN--RKQIEQNKNVISE---EIRPQQLELFEE 464 Score = 200 bits (508), Expect = 6e-49, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 5/269 (1%) Query: 326 INKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 + + +S + + S Q+ A + T++ + + +++N+ ++ + Sbjct: 398 LFEGTLSDKKNEEQPVFSETKQEIAEQKTAEYLKTAVDSEGNRKQIEQNKNVISEEIRPQ 457 Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 E+ ES + H QI Y + Q D I+DQHAAHE++ +E+ + Sbjct: 458 QLELFEEKLLAPESRSRH----QLIGQIFDTYWLVQFEDKFFIIDQHAAHEKVYYERFVK 513 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 F + SQ L P I+ L E AL+ + + G + E FG I +P+ L Sbjct: 514 RFREQTVESQYLSPPLIVSLNLQEEALLKANRKYFEDFGFEIEPFGGKEYCINAVPSNLY 573 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 +L +++D + L + LATMAC +++ +M E N L+ E+ Sbjct: 574 GLTEEELFLEMLDNLASEKDKDPL-GIFASRLATMACKAAVKGNNQMSDREANALIDELL 632 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 N C HGRPT I + +++EK F R Sbjct: 633 TLENPYHCPHGRPTIISMTKTELEKKFKR 661 >gi|327355802|gb|EGE84659.1| DNA mismatch repair protein [Ajellomyces dermatitidis ATCC 18188] Length = 842 Score = 312 bits (799), Expect = 1e-82, Method: Composition-based stats. Identities = 116/410 (28%), Positives = 192/410 (46%), Gaps = 16/410 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L ++N+IAAGEII P A+KELIENS+DA ++ VE ++ GG QITDNG Sbjct: 32 KIQALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGATSVEILVKDGGLKLLQITDNGH 91 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 92 GIDCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAW 151 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ +P A GT + V DLF+ +P R +S E I DV Sbjct: 152 KAHYSDGKLVPAKPGQTAEPKPTAGRGGTQITVEDLFYNVPTRRRAFRSSSEEYAKILDV 211 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + R A+ V+F+ + ++ S N +RI Q+ G + V + + Sbjct: 212 VGRYAVHCSGVAFSCKKHGDSGVSIST-SMNSTTVDRIRQIHGSAVASELVNFSVEDPRL 270 Query: 231 -ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 G+ ++ +FIN R+V+ + I AY+ +P G +P L LE Sbjct: 271 GFRASGWASNANYH-AKRTTILLFINHRSVESTAVRRAIEQAYSNFLPKGGHPFAYLDLE 329 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P++VDVNVHP K + F N I I +IQ+ + +S + + + Sbjct: 330 IEPQRVDVNVHPTKREVNFLNEDEIIASICTAIQQKLATVD--SSRTFMVQTLLPAGRTR 387 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 + + + L + + L D + + + + Sbjct: 388 SDAMNPNAESPYNDKQPTPRTLSGTKRPYENNLVRTDASMRKITSMLPPA 437 >gi|239607860|gb|EEQ84847.1| DNA mismatch repair protein [Ajellomyces dermatitidis ER-3] Length = 842 Score = 312 bits (799), Expect = 1e-82, Method: Composition-based stats. Identities = 116/410 (28%), Positives = 192/410 (46%), Gaps = 16/410 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L ++N+IAAGEII P A+KELIENS+DA ++ VE ++ GG QITDNG Sbjct: 32 KIQALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGATSVEILVKDGGLKLLQITDNGH 91 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 92 GIDCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAW 151 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ +P A GT + V DLF+ +P R +S E I DV Sbjct: 152 KAHYSDGKLVPAKPGQTAEPKPTAGRGGTQITVEDLFYNVPTRRRAFRSSSEEYAKILDV 211 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + R A+ V+F+ + ++ S N +RI Q+ G + V + + Sbjct: 212 VGRYAVHCSGVAFSCKKHGDSGVSIST-SMNSTTVDRIRQIHGSAVASELVNFSVEDPRL 270 Query: 231 -ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 G+ ++ +FIN R+V+ + I AY+ +P G +P L LE Sbjct: 271 GFRASGWASNANYH-AKRTTILLFINHRSVESTAVRRAIEQAYSNFLPKGGHPFAYLDLE 329 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P++VDVNVHP K + F N I I +IQ+ + +S + + + Sbjct: 330 IEPQRVDVNVHPTKREVNFLNEDEIIASICTAIQQKLATVD--SSRTFMVQTLLPAGRTR 387 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 + + + L + + L D + + + + Sbjct: 388 SDAMNPNAESPYNDKQPTPRTLSGTKRPYENNLVRTDASMRKITSMLPPA 437 >gi|149018395|gb|EDL77036.1| rCG26088 [Rattus norvegicus] Length = 765 Score = 311 bits (798), Expect = 1e-82, Method: Composition-based stats. Identities = 107/329 (32%), Positives = 170/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 15 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVIVKEGGLKLIQIQDNGTG 74 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 75 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 134 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT++ V DLF+ I R LK+ E I +V+ R +I Sbjct: 135 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRRKALKNPSEEYGKILEVVGRYSIHN 194 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + N + I + G +E+ + + GY Sbjct: 195 SGISFSVKKQGETVSDVRTLP-NATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGYI 253 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I YA +P +P + L LEI P+ VDV Sbjct: 254 SNANYSVKKCIFL-LFINHRLVESAALKKAIEAVYAAYLPKNTHPFLYLSLEISPQNVDV 312 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 313 NVHPTKHEVHFLHEESILERVQQHIESKL 341 >gi|162457337|ref|YP_001619704.1| DNA mismatch repair protein MutL [Sorangium cellulosum 'So ce 56'] gi|161167919|emb|CAN99224.1| DNA mismatch repair protein MutL [Sorangium cellulosum 'So ce 56'] Length = 687 Score = 311 bits (798), Expect = 1e-82, Method: Composition-based stats. Identities = 111/320 (34%), Positives = 181/320 (56%), Gaps = 8/320 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++ L + + NQIAAGE++ERP+ +KEL+EN+LDA + R+ I GGG ++ D+G Sbjct: 25 RVAILPDDLANQIAAGEVVERPASVVKELVENALDAGARRIRIDIEGGGVGLVRVADDGR 84 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E+ +AV RH TSKI+ DD +I +FGFRGEALPSI +VS +L +R + G Sbjct: 85 GMSREDASLAVLRHATSKIARLDDLRSIQSFGFRGEALPSIASVSRFSLRTRRDGESEGT 144 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I I G + V P GT+VEVRDLFF +PAR FL++ E+ ++++ + +A+ Sbjct: 145 EIRIEGGGAAQVIPCGCAAGTVVEVRDLFFNVPARRKFLRAVGTESAHVSEIAQAVALGE 204 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+ S + S+ + + GE+ + +T++ + Sbjct: 205 PGVTLVLSRDGRVAREWLRTSSRAERAR--AMLAGEELAT----CAGQRGPLTVEAFVSR 258 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P R A+ ++F+NGR V+D+ + +I AY + GRYP+ + +++ VDVNV Sbjct: 259 PERARSGASWLWMFVNGRHVRDRSLARSIALAYGSVLEPGRYPIGAVFIDLPAELVDVNV 318 Query: 300 HPAKSYIRFRNPTIIRNFII 319 HP K+ +RF + + + + Sbjct: 319 HPQKAEVRFADGRAVADALY 338 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 57/191 (29%), Positives = 101/191 (52%), Gaps = 1/191 (0%) Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 ++ AQ+ + + + DG+ +DQHAA ER+ F ++R F+ + +Q LL P I+ Sbjct: 497 WRSLRFLAQVRNTFFVCEGPDGIYFLDQHAAAERVTFHRLRASFDGRDVATQKLLFPVIV 556 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 E +L+ E E + RLG+ G +A+ +P +L + +L+RD++DE+ S Sbjct: 557 QAAPAEVSLVEEAQEAITRLGLDVRPAGAAQLAVHAVPTLLRRAAPERLVRDLVDELSHS 616 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ LATMAC+GS+R+G + E LL +++ + C HGRP +++ Sbjct: 617 GE-RAFSGAVDLALATMACHGSLRAGDPVAPEEARALLTALDEVDFAGHCPHGRPIVMRV 675 Query: 584 KLSDIEKLFGR 594 ++E GR Sbjct: 676 GWPELEHRVGR 686 >gi|109042257|ref|XP_001087274.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Macaca mulatta] Length = 583 Score = 311 bits (798), Expect = 2e-82, Method: Composition-based stats. Identities = 106/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +++ R +I Sbjct: 128 ASYSDGKLKGPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEIVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + I + G +E+ + + GY Sbjct: 188 AGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKL 334 >gi|256370807|ref|YP_003108632.1| putative DNA mismatch repair protein MutL [Candidatus Sulcia muelleri SMDSEM] gi|256009599|gb|ACU52959.1| putative DNA mismatch repair protein MutL [Candidatus Sulcia muelleri SMDSEM] Length = 544 Score = 311 bits (798), Expect = 2e-82, Method: Composition-based stats. Identities = 136/600 (22%), Positives = 277/600 (46%), Gaps = 66/600 (11%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 M I+ LS+ + NQIA+G++I+ P+ +KE++ENS+DA++ ++ ++ GGK+ I D Sbjct: 1 MTDVIKLLSKNVSNQIASGDVIQNPASILKEILENSIDADAKNIKIILTNGGKNRIHIID 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 +G GM+ + + +R+ TSK++ +D I T GFRGEAL I +V+ + L +R ++ Sbjct: 61 DGIGMSKNDAIQSFERYSTSKLTKIEDLFKISTKGFRGEALSYISSVTQIELETREKTSD 120 Query: 117 TGAQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 G ++ I ++ P+AMN G + ++++F+ IPA+ LKS +E I + ++ Sbjct: 121 LGIRLIIENGELKYKPFPIAMNKGCSICIKNIFYNIPAKRKNLKSSNLELKNIINEFYKI 180 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 +++ +++F K + +N ++ ERI Q+ GE N +++ + + + ++G Sbjct: 181 VLSHKEINFYLENNKKLLFNLN----KSSYKERIIQIYGEKLKNKLIKIKKTTKLVKIKG 236 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y P ++ Y+F+N R + +K I + I +Y + P + L +D + Sbjct: 237 YITHPHYSNSKKLGQYLFLNKRYITNKNIHNAIIASYEGILNKKENPSYFIFLSMDYNKF 296 Query: 296 DVNVHPAKSYIRF--RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 ++N++P+K+ + F + + N I +I++++ I + K Sbjct: 297 NINLNPSKTKVNFFYDSEIELCNNISSTIKESLGINNIY-------------NYYYNNKY 343 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 P S K + Q L N ++ QI Sbjct: 344 FFPLTEKSDLKVFNKKYKQIKNLFKNQSFYKNETKI----------------HLYKWIQI 387 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 + +Y++ GL++VDQ+ AH+R++++ + +L + + + Sbjct: 388 YNSYLLGVIKSGLLLVDQNRAHQRILYDFF--------------YKKKSKNLKIDKKSFL 433 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 + L+ LG K I ++ + K NI ++L I + + Sbjct: 434 KKILSKLNYLGFKIFVL-KKKILVQSFSLGIKKTNISKILEKIFEN----------EKMK 482 Query: 534 ENILATMACYG-SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 +NIL C S++ G+K+ ++E+ L++++ + N G + + I+KLF Sbjct: 483 KNILYKYICKYFSLKKGKKISNLEIKGLIKKLFVSNNPYYSPFGEKILLNVSKEKIKKLF 542 >gi|317487374|ref|ZP_07946164.1| DNA mismatch repair protein MutL [Bilophila wadsworthia 3_1_6] gi|316921370|gb|EFV42666.1| DNA mismatch repair protein MutL [Bilophila wadsworthia 3_1_6] Length = 689 Score = 311 bits (798), Expect = 2e-82, Method: Composition-based stats. Identities = 125/407 (30%), Positives = 213/407 (52%), Gaps = 14/407 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I LS ++ NQIAAGE++ERP+ +KEL+ENSLDA ++ +E + GG+S ++ DNG G Sbjct: 17 IHLLSPELRNQIAAGEVVERPASVVKELVENSLDAGATLIEVTLENGGQSLIRVRDNGAG 76 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMS--RPPQN--N 116 + + E+ +AV RH TSKI+ DD +I +FGFRGEALPSI +VS + S R ++ Sbjct: 77 IPAAELELAVTRHATSKITSMDDLWHISSFGFRGEALPSIASVSSFRMESAFRASEDAEP 136 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 A I + ++ P ++ GT+VE+RDLF TIPARL FLK+ E +++ R+A Sbjct: 137 DAAFIQMEHGVLAQQGPSGLHKGTVVEIRDLFATIPARLKFLKAPATEQKRAQELLTRLA 196 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + + F F + + ER+S + + + + +N+I + G Sbjct: 197 LTHTDAGFIFLAGTREVLRFPA---GQSLQERLSVIWPDSVTETLLPFDRTTNDIRVHGL 253 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P + ++ +++NGR V DK IL +R AY + YP +VL +++ P +VD Sbjct: 254 VSPPGQAQPRGDRMLLYVNGRAVNDKVILRAVREAYKGRLLSKEYPQIVLFMDLPPEEVD 313 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI-----STSSVLSKKMISSFHQDNAP 351 VNVHPAK +RFR+ + +++++++A+ + + S + ++ Sbjct: 314 VNVHPAKIEVRFRDERSVFGAVLRAVEEAVVRNLPTGDLDAAPSGEEARHAPAYEPKPLG 373 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 + Q+ L ++ + + + P+ + SE + E Sbjct: 374 FWGEADRERIMRPRQQPLIPPDHEETPSAVPPASERPASEPDSVPEP 420 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 112/298 (37%), Gaps = 18/298 (6%) Query: 301 PAKSYIRFRNPTIIRN-FIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 P S P + + +K + ++ + +F P Sbjct: 404 PPASERPASEPDSVPEPLLYGEEGLPWDKVPDNHAAPSFHEAPQAFAAPQPPTAGAAPLP 463 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + + + NR ++ + E V G + ++ Sbjct: 464 ETAPHAAVQP-PAANRARPSEPEQPEIEQLGEGQVRVGPYVYMGQIGGTYL--LLRDIRN 520 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + L+I+DQHAAHER++ ++ S SQ L+ P L E I E E Sbjct: 521 GRDNASLLILDQHAAHERVLVSRIEAGGFSG--MSQPLVLPLEYTLHPAERERIQEFHES 578 Query: 480 LHRLGIKA---ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L LG + E+ + +R +P +L + + +R+++ ++ + ++ Sbjct: 579 LSALGFELALREQGAGTVLEVRAVPPLLERAAAGEFIREVLA---------GRKEDLHSL 629 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ATMAC +I++G + E L+ + N C HGRP ++ SD++K+F R Sbjct: 630 WATMACKAAIKAGDALAPDEAVNLIAQWLMTENRQFCPHGRPCVLQWGTSDLDKMFKR 687 >gi|114585962|ref|XP_001170390.1| PREDICTED: MutL protein homolog 1 isoform 6 [Pan troglodytes] Length = 725 Score = 311 bits (798), Expect = 2e-82, Method: Composition-based stats. Identities = 107/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + I + G +E+ + + GY Sbjct: 188 AGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKL 334 >gi|67515689|ref|XP_657730.1| hypothetical protein AN0126.2 [Aspergillus nidulans FGSC A4] gi|40746148|gb|EAA65304.1| hypothetical protein AN0126.2 [Aspergillus nidulans FGSC A4] gi|259489678|tpe|CBF90147.1| TPA: DNA mismatch repair protein Mlh1, putative (AFU_orthologue; AFUA_5G11700) [Aspergillus nidulans FGSC A4] Length = 744 Score = 311 bits (797), Expect = 2e-82, Method: Composition-based stats. Identities = 139/558 (24%), Positives = 239/558 (42%), Gaps = 39/558 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L ++N+IAAGEII P A+KELIEN++DA S+ +E ++ GG QITDNG Sbjct: 30 KIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKEGGLKLLQITDNGH 89 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 90 GIDRDDLPILCERFTTSKLKEFEDLSSIATYGFRGEALASISHIAHLTVTTKTADSSCAW 149 Query: 120 QIAISGEKISSVRPVAMNP--------GTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + + K+ +P GT + V DLF+ +P R +S E I DV Sbjct: 150 RAHYADGKLVPPKPGQSAAPKATAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDV 209 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL--NEKSN 229 + R A+ V+F+ ++ + N +RI Q+ G N VE ++ Sbjct: 210 VGRYAVHCSGVAFSCRKHGDAGVSIST-AVALNTIDRIRQIHGSAVANELVEFSVKDEKL 268 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 T G ++ +FIN R+V+ I + YA +P G +P V + LE Sbjct: 269 GFTSSGLVTNANYH-VKRTTILLFINHRSVESTAIKRAVEQTYASFLPKGGHPFVYIDLE 327 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P ++DVNVHP K + F N I + I I+ +++ S+ + L++ ++ S Sbjct: 328 IEPHRLDVNVHPTKREVNFLNEDEIIDNICAEIRSKLSQVD-SSRTFLTQTLLPSIQTPK 386 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 A T K + + + T+ + S + Sbjct: 387 RSSQVQDADAAPKTPAPTKKPYENSLVRTDSRVRKITSMLSPATSQPPSATLNLEGQLEN 446 Query: 410 CAQIHQNYIISQTTDG-------LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + + +I TTD + + AA + + + + S + I Sbjct: 447 TQTVLDDGLIYTTTDREPLKIALTSVKNLRAAVRSSMHQSLTETIASHTYVGLVDVNRRI 506 Query: 463 IDLLEGECALIMEH----DEDLHRLGIKAERFGP-NAIAIREIPAILSKKNIPQLLRDII 517 + G ++++ E ++LG FG I + P ++ D++ Sbjct: 507 AAVQAGVKLYLIDYGMFCAEFFYQLG--LTDFGNFGTIQLEPPPKLI----------DLL 554 Query: 518 DEIIDSSTTYTLQDRIEN 535 +S +D E Sbjct: 555 HIAAESELQQASEDYEEK 572 >gi|313900881|ref|ZP_07834371.1| DNA mismatch repair protein, C-terminal domain protein [Clostridium sp. HGF2] gi|312954301|gb|EFR35979.1| DNA mismatch repair protein, C-terminal domain protein [Clostridium sp. HGF2] Length = 695 Score = 311 bits (797), Expect = 2e-82, Method: Composition-based stats. Identities = 126/343 (36%), Positives = 201/343 (58%), Gaps = 7/343 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L E + N IAAGE++ERP +KEL+EN +DA +S +E I+ GG + I D+G Sbjct: 3 RINRLDEHLSNMIAAGEVVERPQGIVKELVENCIDAHASNIEIQISQGGIATITIIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ +A +RH TSK+ + D NIHT GFRGEALPSI +VSH+ L R + Sbjct: 63 GMDPEDATLAFERHATSKLKEVNDLWNIHTMGFRGEALPSIASVSHVLL--RTNDGTSST 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I+ K+ S RP GT++E+++LF PAR LKS Q E +LI+DV+++ A+++ Sbjct: 121 EVEINYGKLISARPCGTPKGTMIEIQNLFQKTPARFKHLKSPQYEFSLISDVVQKFALSH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ F S +K +GN E + Q+ G D +A+ L+ + ++GY Sbjct: 181 PEIGFCLSHDGRTVFKTK---GSGNLLEVLMQIYGRDSAKSAISLDGSDQDYKIKGYIMQ 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P FNR ++INGR +++ + I AY+ +P RYP+VV+ L +D + VDVNV Sbjct: 238 PQFNRATKYYMLLYINGRMIRNYHLQKAILDAYSPYMPKDRYPIVVIDLLMDAQLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI 342 HP+K IR + + ++I+KA+ ++ ++K+ + Sbjct: 298 HPSKWEIRLSKEKQLEKLLYETIRKALQEQLEVPRVNITKETV 340 Score = 184 bits (468), Expect = 3e-44, Method: Composition-based stats. Identities = 71/330 (21%), Positives = 125/330 (37%), Gaps = 34/330 (10%) Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 D +HP K+ + +R I K K+ + +K+++ ++ A Sbjct: 368 DSFIHPEKNEKPSLDMEELRRKIE--ADKNRRKESAAPIQPKTKELLPEIREETASYEPE 425 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE------------------ 397 + + + +Q ++LP+ + +E Sbjct: 426 DSTSVKAVTEEADVKVQHEDTDKTEVLPAAHTGSEAHTEAIETDISSDAAVAYKEISQSE 485 Query: 398 -------------ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 + Q H YI+++ GL I+DQHAA ER +E +R Sbjct: 486 ELVYEKKAEVEQPQPLNPSLPQLRVIGQFHSCYILAEGEKGLYIIDQHAAQERYHYEIIR 545 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL 504 + +Q LL P I+ + + + L +LGI E FG + R++P + Sbjct: 546 KQILDGNNDTQPLLLPITIESTISAVSQADDLNALLEQLGIHLEVFGDHTFVCRQLPLWM 605 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 L D+ID I + +L ++ +ATMAC+ SIR R + EM R++ ++ Sbjct: 606 KDVEEEAFLCDMID-IWEKDKEISLDKLRKHAIATMACHSSIRFNRSLTLDEMKRVIEDL 664 Query: 565 EKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT I ++ + F R Sbjct: 665 AHCEQPFHCPHGRPTMICMEDKALIHEFER 694 >gi|41054934|ref|NP_956953.1| DNA mismatch repair protein Mlh1 [Danio rerio] gi|34785440|gb|AAH57507.1| MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Danio rerio] Length = 724 Score = 311 bits (797), Expect = 2e-82, Method: Composition-based stats. Identities = 108/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGEII+RP+ AIKE++EN LDA+S+ ++ + GG I DNG G Sbjct: 5 IRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKSTNIQITVKEGGLKLILIQDNGTG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ + +R TSK+ DD S+I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 65 IRKDDMEIVCERFTTSKLKSFDDLSSIATYGFRGEALASISHVAHVTITTKTADAKCAYR 124 Query: 121 -IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G+ S +P A N GT++ V DLF+ + R LKS E + I +V+ R AI Sbjct: 125 ANYCDGKLKSPPKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIVEVVSRYAIHN 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL--QGYT 237 SF+ + N + + I V G +E+ + + +GY Sbjct: 185 SGKSFSVKKQGEMVADVKTLP-NASVLDNIRVVFGVAVSRELIEVECEDQKFAFKVKGYI 243 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T Y +P +P + L LEI P+ +DV Sbjct: 244 SNANYS-VKKCILILFINHRLVESSALKKAIETVYTAYLPKNTHPFLYLSLEIAPQNIDV 302 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I I + I+ + Sbjct: 303 NVHPTKHEVHFLHEDSIIESIQKHIENKL 331 >gi|257051097|ref|YP_003128930.1| DNA mismatch repair protein MutL [Halorhabdus utahensis DSM 12940] gi|256689860|gb|ACV10197.1| DNA mismatch repair protein MutL [Halorhabdus utahensis DSM 12940] Length = 709 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 112/363 (30%), Positives = 185/363 (50%), Gaps = 11/363 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L + I +IAAGE++ERP+ +KEL+ENSLDA++SRV + GG +++D+G G Sbjct: 4 IRELDQTTIERIAAGEVVERPASVVKELLENSLDADASRVRVAVEAGGTESIRVSDDGVG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 MT + AV+ H TSKI D D + + T GFRGEAL +I AVS +T+ +RP + G Sbjct: 64 MTEGDARAAVREHTTSKIRDISDLESGVGTLGFRGEALHAISAVSRMTITTRPRGGDRGT 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + G ++++V GT VE+ DLF+ +PAR +L + E + + V+R A+A Sbjct: 124 RLRVEGGEVTTVEAAGCPEGTTVEIADLFYNVPARRKYLSRDATEFDHVNTVVRNYALAN 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI----TLQG 235 P V+ + + + E + V G + + ++++ + + G Sbjct: 184 PAVAVALEHDGRETF---ATTGGDSLRETVMAVYGREVAESMIDVDARELPAGPLDAIDG 240 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 P NR + F+NGR V+ + I AY + RYP VL L + V Sbjct: 241 LVSHPETNRADREYVATFVNGRYVRSSAARNAIVEAYGNQLSPDRYPFAVLDLSLPAGTV 300 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNVHP K +RF + +R + ++++ + + G+ S + + + P Sbjct: 301 DVNVHPRKMEVRFADEAGLREQVRAAVEETLLENGLIRSGAPRGQS-APEQTEIDPTATT 359 Query: 356 PKY 358 P Sbjct: 360 PDS 362 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 3/257 (1%) Query: 340 KMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 + S+ + + + + + ++ + T E + E Sbjct: 443 EPDSAAPPAETGSPASAGHGEGTSQGSGEPERRGAGDAETAVVDAGSQTRLESGEEPLEQ 502 Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 Q + Y++++T GLV++DQHAA ER+ +E++R F T+Q L Sbjct: 503 TFDSLPSMRVLGQFQETYVVAETDTGLVLIDQHAADERINYERLRDAFAGET-TTQALAQ 561 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P IDL E +L + L RLG AER +A+ +P+++++ P+LLRD++ Sbjct: 562 PVEIDLTARESSLFEDFQAALARLGFSAERVDDRTVAVTTVPSLVAETADPELLRDVLSS 621 Query: 520 IIDSST--TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 +DS + T++ E +LA +ACY SI + + LL +E N C HGR Sbjct: 622 FVDSDSDPGATVEAAAEAVLADLACYPSITGNTSLTEGSIVDLLERLEACENPYACPHGR 681 Query: 578 PTFIKLKLSDIEKLFGR 594 P +++ ++ + F R Sbjct: 682 PVVVEIDADELAERFER 698 >gi|310795119|gb|EFQ30580.1| DNA mismatch repair protein MutL [Glomerella graminicola M1.001] Length = 743 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 117/396 (29%), Positives = 190/396 (47%), Gaps = 16/396 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L ++N+IAAGEII P A+KELIENS+DA ++ +E ++ GG QITDNG Sbjct: 31 RIRALDPNVVNKIAAGEIIVAPVNALKELIENSVDAGATALEVLVKEGGLKLLQITDNGC 90 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +RH TSKI+ +D ++I T+GFRGEAL SI ++HL++ ++ ++ Sbjct: 91 GIQKEDLEILCERHTTSKITAFEDLASIATYGFRGEALASISHIAHLSVTTKTRESECAW 150 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + K++ +P A GT + V D+F+ IP R +S E N I D+ Sbjct: 151 RATYLDGKLAPAKPGQSAEPKPTAGRQGTQISVEDMFYNIPTRRRAFRSPGEEFNKIIDI 210 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--SN 229 + R AI V+F+ + ++ Q++ +RI Q+ G N + + Sbjct: 211 VGRYAIHCKGVAFSCKKHGESGASVSVQASATEV-DRIRQIYGSGVANELMHFSTSEDRW 269 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 G+ ++ +FIN R V I + Y+ +P G P + L LE Sbjct: 270 GFKATGWATNANYSIKKTTFL-LFINHRCVDSTSIKKALEQLYSSFLPKGGRPFIYLSLE 328 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 IDP +VDVNVHP K + F N I I + I+ + + S + + Sbjct: 329 IDPARVDVNVHPTKQEVHFLNEDEIIQSICEHIRSKLAEVD--ASRTFMTQSLLPGSHMM 386 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 + T +E + R ++N L+ +D Sbjct: 387 DVTSQDEGDGVPATPARETPGSKRPRRNSNSLVRTD 422 >gi|293400025|ref|ZP_06644171.1| DNA mismatch repair protein HexB [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306425|gb|EFE47668.1| DNA mismatch repair protein HexB [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 692 Score = 311 bits (796), Expect = 3e-82, Method: Composition-based stats. Identities = 122/341 (35%), Positives = 192/341 (56%), Gaps = 7/341 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + N IAAGE++ERP +KEL+EN +DA +S VE I GG I D+G Sbjct: 3 KINRLDEHLSNMIAAGEVVERPMGIVKELVENCIDASASHVEIQILQGGIDTITIIDDGI 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +E+ +A +RH TSK+ + D NIHT GFRGEALPSI +VSH+ L R Sbjct: 63 GMDAEDATLAFERHATSKLKEVNDLWNIHTMGFRGEALPSIASVSHVIL--RTNNGTDAT 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I+ + S +P GT++EV++LF PAR LKS Q E +LI+DV+++ A+++ Sbjct: 121 EVEINYGTLVSAKPCGTPKGTMIEVKNLFQKTPARFKHLKSPQYEFSLISDVVQKFALSH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++ F S +K NG+ E + Q+ G D A+ L+ + + G+ Sbjct: 181 PEIGFVLSHDGRTVFKTR---GNGSLLEVLMQIYGRDSAKTAIALDGNDMDYHIGGFIMQ 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P FNR ++INGR +++ + + AYA +P RYP+ ++ +E+D + VDVNV Sbjct: 238 PNFNRATKYYMLLYINGRMIRNYHLQKAVMDAYAPYLPKERYPIAIINMEMDAQLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK 340 HP+K IR + + ++I A+ + ++++ Sbjct: 298 HPSKWEIRLSKEKQLEKLVYETISNALKEHLQVPKVNVNRE 338 Score = 197 bits (500), Expect = 6e-48, Method: Composition-based stats. Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 11/315 (3%) Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 ++ Q+ V++ +K + P I+ I ++ I + +K + Sbjct: 378 LNMEQLKVDIEKSKEEAHIKYPQPIKRECITETKETETIYKIRDAVDTKQKQTHNVGIKQ 437 Query: 350 APKTHLPKYA----------TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 P K T T E+ F S ++ T + + ++ Sbjct: 438 QPGNEEKKEEKEQVKEQEMLTPSTANVEQAFHPHMETSKLEVPKKQVQTMEQSDLIHKKP 497 Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 Q H YII++ GL I+DQHAA ER +E +R+ + K +Q LL Sbjct: 498 RNPSLPQLRVIGQFHNCYIIAEGEKGLYIIDQHAAQERYHYEVIRESILAGKNDAQPLLL 557 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P I+ + + ++ + +LGI E FG + RE+P + L+D+ID Sbjct: 558 PITIEASVSAIMQLEDLNKVMEQLGIHLESFGEKTLVCRELPVWMKDVEEAAFLQDMID- 616 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 I + +L+ ++ +ATMAC+ SIR R + EMNR++ ++ K C HGRPT Sbjct: 617 IWERDKALSLEKLRKHAIATMACHSSIRFNRSLTMEEMNRVIEDLGKCEQPFHCPHGRPT 676 Query: 580 FIKLKLSDIEKLFGR 594 I ++ D+ F R Sbjct: 677 LICMEEKDLIHDFER 691 >gi|46136425|ref|XP_389904.1| hypothetical protein FG09728.1 [Gibberella zeae PH-1] Length = 737 Score = 311 bits (796), Expect = 3e-82, Method: Composition-based stats. Identities = 140/543 (25%), Positives = 224/543 (41%), Gaps = 50/543 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KELIEN++DA ++ ++ + GG QITDNG Sbjct: 42 RIKALDPNVVNKIAAGEIIVAPVHALKELIENAVDAGATSLDVLAKEGGLKLLQITDNGC 101 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +RH TSKI+ +D S I T+GFRGEAL SI ++HL++ ++ ++ Sbjct: 102 GIQKDDLAILCERHTTSKITTFEDLSAIETYGFRGEALASISHIAHLSVTTKTKDSDLAW 161 Query: 120 QIAISGEKISSVRP--------VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + K++ +P VA GT + V DLFF I R +S E N I D+ Sbjct: 162 RAHYYEGKLAPAKPGQSAEPKGVAGRQGTQITVEDLFFNIATRRRAFRSPSDEFNKIIDM 221 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--SN 229 + R A+ V FT ++ Q+ + +RI Q+ G N +E + Sbjct: 222 VGRYAVHCKGVGFTCKKAGEASTNLSIQA-HATVIDRIRQIHGSAVANELLEFSVSEARW 280 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 +GYT ++ +FIN R V+ I + YA +P +P + L LE Sbjct: 281 GFRAEGYTTNANYS-VKKTTILLFINHRCVESTHIKKAVEQTYANFLPKNGHPFIYLSLE 339 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 IDP +VDVNVHP K + F N I I +I+ + + TS + + Sbjct: 340 IDPARVDVNVHPTKREVHFLNEDEIIQSICAAIESKLA--AVDTSRTFMTQTLLP----G 393 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 A A S + + R +NDL+ +D + + Sbjct: 394 AKAIESTSQAESDGTPSRRTPATKKRRYSNDLVRTDTAERKITSMFARAGPSESTSSMDR 453 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR-----------------QDFNSTKI 452 + + VD+ RL K + Sbjct: 454 AGDTIPIHEPLEYET----VDRELVQCRLNSVKYLREEVREDMHLELTEIFANHTFVGVV 509 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI-KAERFGPNAIAIREIPAILSKKNIPQ 511 Q L + E ++LG+ FG I+ PA+ ++ + Sbjct: 510 DEQRRLAAIQGGVKLYLIDYGRTCYEYFYQLGLTDFGNFG----TIKFAPAL----DLRE 561 Query: 512 LLR 514 LLR Sbjct: 562 LLR 564 >gi|320120485|gb|EFE28653.2| DNA mismatch repair protein MutL [Filifactor alocis ATCC 35896] Length = 677 Score = 310 bits (795), Expect = 3e-82, Method: Composition-based stats. Identities = 120/405 (29%), Positives = 195/405 (48%), Gaps = 12/405 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L E I +IAAGE++ERPS IKEL+ENS+DA + + I GGK + +++D+G G Sbjct: 5 IFILDEFTIGKIAAGEVVERPSSVIKELVENSIDANAKNIVIEIKDGGKQYIRVSDDGVG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ RH TSKI +D N+ T GFRGEAL SI AVS TLM++ G++ Sbjct: 65 IPHAELSKVFLRHSTSKIQKIEDLENLQTCGFRGEALSSICAVSKTTLMTKTSDEEWGSR 124 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G K S + ++ GT + + DLFF +PAR F+KS E I ++ R+A+ P Sbjct: 125 VFVEGGKYISTEKIGLSQGTTLVIEDLFFNVPARKKFMKSSPAEAMAINQIVCRLAMGNP 184 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS-NEITLQGYTGI 239 + F + + +G I + G++ I E+TL GY Sbjct: 185 SIRFKLISNNK---VIVSTVGDGTLENAIRSIYGKNAIEQMFYAKRNFEQEVTLYGYLSK 241 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + + N F N R V+D + + AY TIP+G++P VL ++++P Q+D NV Sbjct: 242 TSMYQTNRRMQNFFFNRRYVEDISVARAMEDAYKGTIPIGKFPSCVLFIDLNPAQIDFNV 301 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K +++ + + + + ++ A+ +K SF ++ K Sbjct: 302 HPNKLNVKYDSELRLEDKVYAFVRDALFQKSN------HLIPKGSFVREEKTVEPPVKVQ 355 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 ++ T+EK + ++ D E ES+ + Sbjct: 356 VPISVTEEKESGESQEVAVFSFEKKDATIPFEKILFPNESDTKEF 400 Score = 193 bits (491), Expect = 5e-47, Method: Composition-based stats. Identities = 58/229 (25%), Positives = 120/229 (52%), Gaps = 1/229 (0%) Query: 366 QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG 425 +EK +E+ ++ S+ + +E + +Y+ ++ Y+I + Sbjct: 447 REKNRAKESTVAERGKEISEPVVQNFLQTQEKEEDILNYEQLHYVGRVFSTYLIMTKEER 506 Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 + ++DQHAAHER++FE+ + +++SQ LL P +++L + L+ + +++ +LG Sbjct: 507 MYLIDQHAAHERVLFERYMVLLHKDELSSQQLLNPILLELSYEDATLVEMYRDEIQKLGF 566 Query: 486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 + G I IR +P + Q + +II+ + ++ ++ I+ + AT AC + Sbjct: 567 DFDFLGEKVIVIRGVPVFFQETQGEQFMYEIIELLQENKNLENYEEFIDKV-ATKACRAA 625 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 I++ ++ E+ LL+++ + N C HGRP FI++K D+EK+F R Sbjct: 626 IKANDRIMDTEVEALLKDLNQCDNKYTCPHGRPVFIEVKKYDLEKMFKR 674 >gi|291231519|ref|XP_002735708.1| PREDICTED: MutL protein homolog 1-like [Saccoglossus kowalevskii] Length = 790 Score = 310 bits (795), Expect = 3e-82, Method: Composition-based stats. Identities = 115/329 (34%), Positives = 179/329 (54%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+SS ++ + GG QI DNG G Sbjct: 7 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSSNIQVTVKSGGLKLIQIQDNGTG 66 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D NI T+GFRGEAL SI V+H+T+ +R + + Sbjct: 67 IRKEDMNIVCERFTTSKLRKFEDLQNIETYGFRGEALASISHVAHVTITTRTADSKCAFK 126 Query: 121 -IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I G+ +V+P A N GT + V DLF+ + R LKS E N I++VI R AI Sbjct: 127 GNYIDGQLKGAVKPCAGNKGTQITVEDLFYNVSTRRKALKSPGEEHNKISEVISRYAIHN 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 V+FT + + S+ + I + G +E++ ++++ + GY Sbjct: 187 AGVAFTLKKQGESVADVRTPSSASKI-DNIRTIYGASVARELLEVSFQNSKLSFKVSGYV 245 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + TI Y +P +P + L LEI P+ VDV Sbjct: 246 SNANYSVKKCIFL-LFINHRLVESSALRKTIEAVYTSYLPKNSHPFLYLSLEISPQNVDV 304 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + +I I Q +++ + Sbjct: 305 NVHPTKHEVHFLHEDMILEEIQQCVEQKL 333 >gi|302768865|ref|XP_002967852.1| hypothetical protein SELMODRAFT_408722 [Selaginella moellendorffii] gi|300164590|gb|EFJ31199.1| hypothetical protein SELMODRAFT_408722 [Selaginella moellendorffii] Length = 696 Score = 310 bits (795), Expect = 3e-82, Method: Composition-based stats. Identities = 112/370 (30%), Positives = 176/370 (47%), Gaps = 9/370 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IRKL E ++N+IAAGE+I+RP+ A+KEL+ENSLDA ++ V ++ GG QITDNG Sbjct: 8 RIRKLEESVVNRIAAGEVIQRPASALKELLENSLDAGATVVSVIVKDGGLKLIQITDNGH 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +RH TSKI+ +D + T GFRGEAL S+ V+HLT+ + G Sbjct: 68 GIRYEDLPILCERHTTSKITAFEDLQKVSTLGFRGEALASMTFVAHLTVTTMTEGQTHGY 127 Query: 120 Q-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + G RP A GT + V +LF+ + AR K+ E + DVI + +I Sbjct: 128 RASYKDGVMEGDPRPCAAVKGTQIMVENLFYNVTARRKSFKNPSDEYARVVDVISKYSIQ 187 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN----EITLQ 234 PKV F+ R + + E I V G +E+ N + Sbjct: 188 NPKVGFSCKKFGDARADVQTPGNTSSL-EAIRAVYGPGTSRELIEIKTSKNDSSDFFEMN 246 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY ++ +FIN R V + I YA +P P + + + + P Sbjct: 247 GYISSANYS-AKRTTMILFINDRLVDCAPLKRAIEVVYAAVLPKASKPYIYMSIRLPPEH 305 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHP K + F N + I ++++ + + S + + ++F P + Sbjct: 306 VDVNVHPTKKEVSFLNQESLIEAIQTAVEQELLQSNKSRTFYAQTSLEAAFLPQGQPASQ 365 Query: 355 LPKYATSLTN 364 ++ Sbjct: 366 AENKSSQKAP 375 >gi|220678860|emb|CAX13351.1| mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Danio rerio] Length = 725 Score = 310 bits (795), Expect = 4e-82, Method: Composition-based stats. Identities = 107/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGEII+RP+ AIKE++EN LDA+S+ ++ + GG I DNG G Sbjct: 6 IRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKSTNIQITVKEGGLKLILIQDNGTG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ + +R TSK+ +D S+I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 66 IRKDDMEIVCERFTTSKLQSFEDLSSIATYGFRGEALASISHVAHVTITTKTADAKCAYR 125 Query: 121 -IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G+ S +P A N GT++ V DLF+ + R LKS E + I +V+ R AI Sbjct: 126 ANYCDGKLKSPPKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIVEVVSRYAIHN 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL--QGYT 237 SF+ + N + + I V G +E+ + + +GY Sbjct: 186 SGKSFSVKKQGEMVADVKTLP-NASVLDNIRVVFGVAVSRELIEVECEDQKFAFKVKGYI 244 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T Y +P +P + L LEI P+ +DV Sbjct: 245 SNANYS-VKKCILILFINHRLVESSALKKAIETVYTAYLPKNTHPFLYLSLEIAPQNIDV 303 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I I + I+ + Sbjct: 304 NVHPTKHEVHFLHEDSIIESIQKHIESKL 332 >gi|121713708|ref|XP_001274465.1| DNA mismatch repair protein Mlh1, putative [Aspergillus clavatus NRRL 1] gi|119402618|gb|EAW13039.1| DNA mismatch repair protein Mlh1, putative [Aspergillus clavatus NRRL 1] Length = 751 Score = 310 bits (794), Expect = 5e-82, Method: Composition-based stats. Identities = 112/343 (32%), Positives = 175/343 (51%), Gaps = 14/343 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L ++N+IAAGEII P A+KELIEN++DA S+ +E ++ GG QITDNG Sbjct: 30 RIRPLDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEVLVKDGGLKLLQITDNGH 89 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 90 GIDRDDLPILCERFTTSKLKQFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAW 149 Query: 120 QIAISGEKISSVRP--------VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ +P A GT + V DLF+ +P R +S E I DV Sbjct: 150 RAHYSDGKLVPPKPGQSAEPKATAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDV 209 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + R A+ V+F+ + ++ N +RI Q+ G N VE + ++ Sbjct: 210 VGRYAVHCSGVAFSCRKHGESGAGIST-PAAANTTDRIRQIHGSAVANELVEFQVEDSKL 268 Query: 231 -ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 G ++ +FIN R+V+ I + Y+ +P G +P V + LE Sbjct: 269 GFRSSGLVTNANYH-VKRTVILLFINHRSVESTAIKRAVEQTYSSFLPKGGHPFVYIDLE 327 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 I+P +VDVNVHP K + F N I I I+ + + S Sbjct: 328 IEPHRVDVNVHPTKREVNFLNEDDIIESICSEIRSKLAQVDSS 370 >gi|255720707|ref|XP_002545288.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240135777|gb|EER35330.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 731 Score = 309 bits (792), Expect = 7e-82, Method: Composition-based stats. Identities = 122/418 (29%), Positives = 199/418 (47%), Gaps = 20/418 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+KL E +IN+IAAGEII +P+ A+KE++ENS+DA ++ ++ ++ GG QITDNG Sbjct: 8 TIKKLDESVINKIAAGEIIIQPANALKEMLENSIDANATMIDILVKDGGLKLLQITDNGH 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+S +D +I T+GFRGEAL SI +S L+++++ +N Sbjct: 68 GINKVDLPLLCERFATSKLSKFEDLESIATYGFRGEALASISHISRLSVITKQQDSNLAY 127 Query: 120 QIAISGEKIS-----------SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLI 168 + K+ RP A GT + V DLF+ IP+RL LKS+ E + I Sbjct: 128 KAFYMNGKLCGANFKPGAKSTEPRPTAGKVGTQIIVEDLFYNIPSRLRGLKSKSDEFSKI 187 Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE-- 226 D++ R AI V F+ ++N + ERI V G N +++ Sbjct: 188 LDIVGRYAIHCGDVGFSCKKFGDPLQQLNTRPKLP-IKERIRLVYGSAIANELLDVENIK 246 Query: 227 --KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 + + + G +N Q FIN R V + I + + +P G +P Sbjct: 247 EEELGLMKVSGVLTNANYNNKKKIQPIFFINHRLVTCDPLKKAINSIFQFFLPKGSHPFY 306 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 L LEI P +DVNVHP K +RF N I + I+ + ++ TS + + + Sbjct: 307 YLSLEIRPDNLDVNVHPTKREVRFLNEDEIIDVIVSKVHGILSSVD--TSRKFKTQTVVT 364 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 + + + +T K + QEN++ D ++ + + E Sbjct: 365 KRPNEEIDEGMELPRSQVTQPSLKKYRQENKMVRVDSSQPKISSFMQSQEAGSYHEHM 422 >gi|309775010|ref|ZP_07670025.1| DNA mismatch repair protein HexB [Erysipelotrichaceae bacterium 3_1_53] gi|308917228|gb|EFP62953.1| DNA mismatch repair protein HexB [Erysipelotrichaceae bacterium 3_1_53] Length = 708 Score = 309 bits (792), Expect = 7e-82, Method: Composition-based stats. Identities = 149/486 (30%), Positives = 232/486 (47%), Gaps = 11/486 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L E + N IAAGE++ERP +KELIEN +DA + VE I+ GG + I D+G Sbjct: 3 RINRLDEHLSNMIAAGEVVERPQGIVKELIENCIDAHAETVEIQISQGGIASITIIDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM +E+ +A +RH TSK+ + D NIHT GFRGEALPSI +VSH+ L R NT Sbjct: 63 GMDAEDATLAFERHATSKLKEVNDLWNIHTLGFRGEALPSIASVSHVLL--RTNDGNTST 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ IS K+ S RP GT++E+++LF PAR LKS Q E +LI+DV+++ A+++ Sbjct: 121 EVEISYGKLVSARPCGTPKGTMIEIQNLFQKTPARFKHLKSPQYEFSLISDVVQKFALSH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P + F S +K +GN E + Q+ G D +A+ L+ + ++GY Sbjct: 181 PDIGFCLSHDGRTVFKTK---GSGNLLEVLMQIYGRDSAKSAIALDGSDQDYKIKGYIMQ 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P FNR ++INGR +++ + I AY+ +P RYP+VV+ L +D + VDVNV Sbjct: 238 PQFNRATKYYMLLYINGRMIRNYHLQKAILDAYSPYMPKERYPIVVIDLIMDAQLVDVNV 297 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--FHQDNAPKTHLPK 357 HP+K IR + + ++I+KA+ ++ S ++K+ + Q+ Sbjct: 298 HPSKWEIRLSKEKQLEKLLYETIRKALQEQLEVPSVNITKETVKEKVEEQELQFTYERDD 357 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSD-DPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 L F ++ L + + D +E + Q Sbjct: 358 NIKKLHEEVNNSFTHPEKIEKPALDMEELRKQIAIDRTQKKEVNIPVQPMTREIVSEVQE 417 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 I + + A E I EK + + S T E Sbjct: 418 ETIPYPEEEKSLSQIVADKEVSIEEKAVDSPTN-SLDSGLEKTTEAPISHSDAGQDEEPL 476 Query: 477 DEDLHR 482 E L + Sbjct: 477 REKLEK 482 Score = 194 bits (492), Expect = 5e-47, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 121/291 (41%), Gaps = 2/291 (0%) Query: 304 SYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLT 363 + + I+ + +I +K + + + + + + + L Sbjct: 419 TIPYPEEEKSLSQ-IVADKEVSIEEKAVDSPTNSLDSGLEKTTEAPISHSDAGQDEEPLR 477 Query: 364 NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTT 423 EK + ++ ++ + + Y + + Q H YI+++ Sbjct: 478 EKLEKDPAENTEIAFKEIKQTQELQYEKTAQKPHQPLNPSLPQLRVIGQFHNCYILAEGE 537 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 GL I+DQHAA ER +E +R S +Q LL P I+ + + E + L ++ Sbjct: 538 KGLYIIDQHAAQERYHYEIIRNQILSGNTDTQPLLLPITIESTISAVSQVEELNGLLEQI 597 Query: 484 GIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY 543 GI E FG + R++P + L D+ID I + +L ++ +ATMAC+ Sbjct: 598 GIHLEVFGDHTFVCRQLPLWMKDVEEEAFLCDMID-IWEKDKEISLDKLRKHAIATMACH 656 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 SIR R + EM R++ ++ + C HGRPT I ++ + K F R Sbjct: 657 SSIRFNRSLTLEEMKRVVDDLGRCEQPFHCPHGRPTMICMEDKALIKEFER 707 >gi|115387545|ref|XP_001211278.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114195362|gb|EAU37062.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 745 Score = 309 bits (792), Expect = 8e-82, Method: Composition-based stats. Identities = 112/343 (32%), Positives = 174/343 (50%), Gaps = 14/343 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L ++N+IAAGEII P A+KELIEN++DA S+ +E ++ GG QITDNG Sbjct: 30 RIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSLEILVKDGGLKLLQITDNGH 89 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 90 GIDRDDLPILCERFTTSKLKHFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAW 149 Query: 120 QIAISGEKISSVRPVAMNP--------GTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ +P GT + V DLF+ +P R +S E I DV Sbjct: 150 RAHYSDGKLVPAKPGQSAAPKATAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDV 209 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + R A+ V+F+ + ++ N +RI Q+ G N VE + + Sbjct: 210 VGRYAVHCSGVAFSCRKHGDSGVSIST-PAAANTTDRIRQIHGSAVANELVEFKIEDEKL 268 Query: 231 -ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 G ++ +FIN R+V+ + I YA +P G +P V + LE Sbjct: 269 GFRSSGLVTNANYH-VKKTVILLFINHRSVESTAVKRAIEQTYASFLPKGGHPFVYIDLE 327 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 I+P++VDVNVHP K + F N I I I+ + + S Sbjct: 328 IEPQRVDVNVHPTKREVNFLNEDEIIECICNEIRSKLAQVDSS 370 >gi|321259603|ref|XP_003194522.1| MUTL-like protein 1 [Cryptococcus gattii WM276] gi|317460993|gb|ADV22735.1| MUTL-like protein 1, putative [Cryptococcus gattii WM276] Length = 765 Score = 309 bits (791), Expect = 9e-82, Method: Composition-based stats. Identities = 121/421 (28%), Positives = 200/421 (47%), Gaps = 19/421 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IRKL++ +INQIAA EII RPS AIKEL+ENSLDA S+ ++ + GG QITDNG Sbjct: 24 PIRKLTKDVINQIAAAEIIHRPSNAIKELLENSLDAGSTSIKISVKDGGLKLLQITDNGH 83 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R+ TSK+ +D ++ T+GFRGEAL SI SH+ ++++ G Sbjct: 84 GINKDDLPLLCERYATSKLQKFEDLQSLGTYGFRGEALASISYCSHVEVVTKTKHEGCGW 143 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + + +P A N GT++ DLF+ +P R KS E N I DV Sbjct: 144 KAHYQDGSLIPAKPGGTADPKPAAANDGTVITAADLFYNMPLRKRAFKSTSDEYNRIIDV 203 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + + A+ P V++ + + Q + I+ + N +E+ + Sbjct: 204 VTKYAVHNPHVAWVCKKAGTALPDVATQVG-SSTKANIAALYTSALANELLEIPNTELQP 262 Query: 231 ----ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 L G+ + + +FIN R V + I Y +P G P V L Sbjct: 263 ARLGAKLTGWVSNANSSWSKKGGWLLFINNRLVDSNKLKKAIEGHYTSYLPKGASPWVYL 322 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH 346 L+IDP ++DVNVHP KS +RF N I + +IQ++Q A+ +S S + + + Sbjct: 323 SLQIDPAKIDVNVHPTKSEVRFLNEDEIVDAVIQAVQTALEGANLSRSFTVQTLLPGAPT 382 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND---PVEESEATH 403 ++ ++ + ++ + R+ ++ T + + VE+ E+ Sbjct: 383 PLGKRESSNSVITSASFSARKAAPNYKVRMDPSNRTLDSMFTVIDPSQLSGFVEDEESQE 442 Query: 404 Y 404 Sbjct: 443 Q 443 >gi|284166477|ref|YP_003404756.1| DNA mismatch repair protein MutL [Haloterrigena turkmenica DSM 5511] gi|284016132|gb|ADB62083.1| DNA mismatch repair protein MutL [Haloterrigena turkmenica DSM 5511] Length = 738 Score = 309 bits (791), Expect = 1e-81, Method: Composition-based stats. Identities = 118/383 (30%), Positives = 192/383 (50%), Gaps = 18/383 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E + +IAAGE++ERP+ A+KEL+ENSLDA + V+ + GG ++ D+G G Sbjct: 11 IRQLDEDTVARIAAGEVVERPASAVKELVENSLDANADSVDVTVEAGGTELIRVADDGRG 70 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQNNT-- 117 M ++ AV+ H TSKI +D + + T GFRGEAL +IG+VS +T+ SRP + Sbjct: 71 MGEADVRAAVREHTTSKIEGLEDLESGVATLGFRGEALHTIGSVSRVTIESRPRDGDESG 130 Query: 118 --GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 G ++ G +++ V P GTIVE+ DLF+ PAR FLK+ E + V+ R Sbjct: 131 GAGTKLTYEGGEVTGVEPTGCPEGTIVEIEDLFYNTPARRKFLKTTATEFAHVNRVVTRY 190 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT--- 232 A+A P V+ + + + + G+ + V G + + + + +++ Sbjct: 191 ALANPDVAVSLTHDGREVF---ATTGQGDLQAAVMAVYGREVASAMIAVEADGDDLPPGP 247 Query: 233 ---LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 + G P NR + ++NGR+V + I AY + RYP V L LE Sbjct: 248 LESVSGLVSHPETNRSSPEYLATYVNGRSVTADAVREGIMGAYGAQLGGDRYPFVTLFLE 307 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 + VDVNVHP K +RF + +R + +++ A+ + G+ S + S+ + + Sbjct: 308 VPGEAVDVNVHPRKREVRFDDDDSVRRQVDAAVESALLEHGLLRSRAPRGR--SAPGEAS 365 Query: 350 APKTHLPKYATSLTNTQEKLFLQ 372 P+ + T E L Sbjct: 366 VAPGDAPRGTSDGEPTTEDLPAA 388 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 4/214 (1%) Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 ++ T S + +E++ Q+ Y++ +T DGLV++DQHAA ER+ +E++ Sbjct: 519 TEQRTLSGEPATGDETDFDSLPALRVLGQLDDTYLVCETDDGLVLIDQHAADERVNYERL 578 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 +Q F +Q L P ++L E + E L RLG A+R +A+ +PA+ Sbjct: 579 QQAFADDP-AAQALAEPVELELTAAEAEAFEGYREALSRLGFYADRTDDRTVAVTTVPAV 637 Query: 504 LSKKNIPQLLRDIIDEIIDSS---TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 L + P+ LRD++ ++ T+ + L +ACY SI + + L Sbjct: 638 LEETIAPERLRDVLASFVEGDREAGAETVDALADEFLGDLACYPSITGNTSLTEGSVVDL 697 Query: 561 LREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L ++ N C HGRP ++ +IE F R Sbjct: 698 LEALDDCENPYACPHGRPVIVRFDEREIEDRFER 731 >gi|225684413|gb|EEH22697.1| DNA mismatch repair protein mutL [Paracoccidioides brasiliensis Pb03] Length = 819 Score = 309 bits (791), Expect = 1e-81, Method: Composition-based stats. Identities = 116/394 (29%), Positives = 189/394 (47%), Gaps = 14/394 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L ++N+IAAGEII P A+KELIENS+DA ++ +E ++ GG QITDNG Sbjct: 32 KIQALDPDVVNKIAAGEIIVAPMHALKELIENSIDAGATSIEILVKDGGLKLLQITDNGH 91 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 92 GIECDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAW 151 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ +P A GT + V DLF+ IP R +S E I DV Sbjct: 152 KAHYSDGKLVPAKPGQSAEPKPTAGRGGTQITVEDLFYNIPTRRRAFRSSSEEYAKILDV 211 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN-- 229 + R A+ V+ + + ++ + + +RI Q+ G + V N + Sbjct: 212 VCRYAVHCSGVAVSCKKHGDSGVSISTSTNSTTV-DRIRQIHGSAVASELVTFNVEDPGL 270 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 G+ ++ +FIN R+V+ + I Y+ +P G +P L LE Sbjct: 271 GFRASGWVSNANYH-AKRTTILLFINHRSVESSAVRRAIEQTYSNFLPKGGHPFTYLDLE 329 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P++VDVNVHP K + F N I + I +IQ+ + S + ++ + Q Sbjct: 330 IEPQRVDVNVHPTKREVNFLNEDEIFSSICTAIQQQLATVDSSRTFMVQTLLPVGRSQST 389 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 + + + N EN L D+ Sbjct: 390 VEGSSMNDKPPTSRNLSGTKRPYENNLVRTDVTM 423 >gi|221121882|ref|XP_002156705.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 697 Score = 308 bits (790), Expect = 1e-81, Method: Composition-based stats. Identities = 112/336 (33%), Positives = 173/336 (51%), Gaps = 13/336 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KL E ++N+IAAGE+I+RPS AIKE+IEN LDA+S ++ + GG F QI D+G Sbjct: 5 KIIKLDEVVVNRIAAGEVIQRPSNAIKEMIENCLDAKSKSIQVTLKNGGLKFIQILDDGC 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +R TSK+S DD +I+T+GFRGEAL SI V+HLT+ SR + Sbjct: 65 GIRKEDMGIVCERFTTSKLSSFDDLKSINTYGFRGEALASISHVAHLTITSRTADSPCAY 124 Query: 120 QIAISGEKISSVR-------PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 + KI + + P A N GT + V DLF+ + R LK+ E N I D+I Sbjct: 125 KAVYEDGKIVAQQGGDAVARPCAGNKGTQIVVEDLFYNVDVRRKALKNPSEEYNKIADII 184 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--SNE 230 + AI P VSFT N + Q+ + I + G + + + Sbjct: 185 SKYAIHNPSVSFTLKKFGENTAGIRTQADM-QVIDNIKNIYGPTIARELLPVTLESVYYG 243 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 + G+ ++ +FIN R V+ + I Y +P ++P + + LE+ Sbjct: 244 FKMNGFISNANYSMKKCIFL-LFINHRLVECNSLKKAIEAVYQNYLPKEKHPFLYMSLEL 302 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 +P +DVNVHP K ++F + I + + I+ + Sbjct: 303 NPANIDVNVHPTKHEVKFLHEEAIIEEVQKCIETEL 338 >gi|321475167|gb|EFX86130.1| putative MLH1, MutL protein 1 [Daphnia pulex] Length = 714 Score = 308 bits (790), Expect = 1e-81, Method: Composition-based stats. Identities = 140/583 (24%), Positives = 241/583 (41%), Gaps = 46/583 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I KL E ++N+IAAGEII+RP+ A+KE++ENSLDA S+ ++ + GG +I DNG G Sbjct: 11 ILKLDETVVNRIAAGEIIQRPANALKEMLENSLDAGSTSIQVTVKDGGLKLLKIQDNGSG 70 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ + +R TSK+ +D + I TFGFRGEAL SI V+HLT++++ + + Sbjct: 71 INKEDFAIVCERFTTSKLQKFEDLNAIGTFGFRGEALASISHVAHLTIITKTVEMQCAYK 130 Query: 121 IAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + K + + +P A GT + V DLF+ +P R N LKS E N I +VI R A+ Sbjct: 131 SSYHNGKLVGASKPCAGTQGTQIVVEDLFYNVPTRRNALKSPSDEHNRIIEVITRFAVHN 190 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ--GYT 237 V F+ + N + S N + I + G + ++LN + + ++ G Sbjct: 191 ASVGFSLKKLNDNGSDVRT-SPNSTQEDNIRILYGHAVAKDLIKLNVEDPVLKVKVNGLI 249 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 + +FIN R V + + + YA + G++P V L +EI P VDV Sbjct: 250 SNVDYAGAKFTML-LFINHRLVDSTPLKRALDSVYATYLAKGKHPFVYLSIEIAPNCVDV 308 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAIN----------KKGISTSSVLSKKMISSFHQ 347 NVHP K + F N I + I + + + I S+ L+K + Sbjct: 309 NVHPTKHEVHFLNEDAIIHKIQSTADILLKNASTSRSFAIQTVIPPSNFLNKPESRVTNS 368 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 + T + + FL ++ ++ ++ S D + + VE S + Sbjct: 369 NATKVYDKQLVRTDSKDQKIDKFLDKSTTASESMMSSLDQSSFINQTSVEASYEPSISVN 428 Query: 408 IACAQIHQ---------NYIISQTTDGLVIVDQHAAHERLIFE-----KMRQDFNSTKIT 453 + + ER FE ++R+ + Sbjct: 429 QRIEAERSEVPDKVRTIPREPEKNNSTISHGVTENITERRNFELTSLSQLREAVKNNTDQ 488 Query: 454 SQTLLTPEIIDL-LEGECALIMEHDEDLHRLGIK-----------AERFGPNAIAIREIP 501 + I + E +++H L+ ++ E FG + P Sbjct: 489 VLRDTFKDSIFVGCVSEKHCLIQHGTRLYIFCLERVAEEFFYQRFLEEFGNCGVICLSDP 548 Query: 502 AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 L + + ++ + + L ++ +L C Sbjct: 549 PPLYNLALMAMDQEDNEWRPEDGPKDYLGKQVAELLG---CKS 588 >gi|183582329|dbj|BAG28292.1| mismatch repair protein [Mesocricetus auratus] Length = 758 Score = 308 bits (789), Expect = 2e-81, Method: Composition-based stats. Identities = 108/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVIVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D + I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLARISTYGFRGEALASISHVAHVTITTKTDDGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTQITVEDLFYNIMTRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + N + I + G +E+ + + GY Sbjct: 188 SGISFSVKKQGETVADIRTLP-NATTVDNIRSIFGSAVSRELIEVGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHDESILERVQQHIEGKL 334 >gi|55379204|ref|YP_137054.1| DNA mismatch repair protein mutL [Haloarcula marismortui ATCC 43049] gi|55231929|gb|AAV47348.1| DNA mismatch repair protein mutL [Haloarcula marismortui ATCC 43049] Length = 746 Score = 308 bits (789), Expect = 2e-81, Method: Composition-based stats. Identities = 114/362 (31%), Positives = 185/362 (51%), Gaps = 22/362 (6%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I++L ++ + +IAAGE++ERP+ +KEL+EN++DA++SRV+ V+ GG ++TD+ Sbjct: 30 MTDIQRLDDQTVERIAAGEVVERPASVVKELVENAIDADASRVDVVVEAGGTDGIRVTDD 89 Query: 60 GFGMTSEEIPMAVQRHCTSKISD--DFS-NIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G GM E + AV+ H TSKI D D + T GFRGEAL +IGAVS LT+ +RP + Sbjct: 90 GIGMDREAVKTAVEEHTTSKIRDIADLEGGVGTLGFRGEALHAIGAVSRLTIRTRPRGGD 149 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G ++ + G ++SV P GT + V DLF+ +PAR +LK E E + V+ A Sbjct: 150 VGTELVLEGGDVTSVSPAGCPEGTTMAVEDLFYNVPARRKYLKQESTEFAHVNTVVASYA 209 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV-------------- 222 +A P V+ + + + + G+ E + V G + + + Sbjct: 210 LANPDVAVSLTHGDRETF---STTGQGDLRETVMSVYGREVAESMISVGAGSEATGSGDE 266 Query: 223 -ELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY 281 + + G P NR ++NGR V+ + + AY I RY Sbjct: 267 MDSFPDGPLDGVHGLVSHPETNRAGREYLSTYVNGRYVRAGTVRDAVIDAYGTQIAPDRY 326 Query: 282 PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM 341 P VL L++ VDVNVHP K +RF + +R + +++ A+ ++G+ S+ + Sbjct: 327 PFAVLFLDVPAGDVDVNVHPRKMEVRFADDEGVREQVRTAVEDALLREGLLRSTAPRGRS 386 Query: 342 IS 343 Sbjct: 387 AP 388 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 110/273 (40%), Gaps = 4/273 (1%) Query: 324 KAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 +I SS + +S S + + + Sbjct: 466 PSIQSADTKPSSETGRTDGTSGESGTGQTGGSVSGGDSDSERPGASATGQTAAERGERKF 525 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + + D E+ Q+ Y++++T DGLV+VDQHAA ER+ +E++ Sbjct: 526 TGGQEQARLGDD-PEATHESLPSMRILGQLADTYVVAETDDGLVLVDQHAADERVNYERL 584 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + F + T+Q L P + L E + + L LG R G ++ +R +P + Sbjct: 585 KAKF-EGETTTQALANPVELGLTAREAEVFDRRSDALASLGFHTARTGERSVEVRTLPGV 643 Query: 504 LSKKNIPQLLRDIIDEII--DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 ++ P ++RD++ + D T++ + +L +ACY S+ + + LL Sbjct: 644 IADAAGPDIVRDVLGAFVAGDDEAAATVEAAADELLGDLACYPSVTGNTSLTEGSVRELL 703 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ N C HGRPT I + ++E F R Sbjct: 704 AALDDCENPYACPHGRPTVIHIDRQELEDRFER 736 >gi|62897179|dbj|BAD96530.1| MutL protein homolog 1 variant [Homo sapiens] Length = 756 Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats. Identities = 106/329 (32%), Positives = 168/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ + ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSTQVIVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R ++ Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + + I + G +E+ + + GY Sbjct: 188 AGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKL 334 >gi|168021022|ref|XP_001763041.1| predicted protein [Physcomitrella patens subsp. patens] gi|162685853|gb|EDQ72246.1| predicted protein [Physcomitrella patens subsp. patens] Length = 721 Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats. Identities = 103/339 (30%), Positives = 170/339 (50%), Gaps = 10/339 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I++L E ++N+IAAGE+I+RP+ A+KEL+ENSLDA ++ + I GG QI DNG Sbjct: 12 PIKRLEEAVVNRIAAGEVIQRPASALKELLENSLDAGATSIGITIKDGGLKLIQIVDNGH 71 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +RH TSK+ +D I T GFRGEAL SI V+HL++++ G Sbjct: 72 GIRYEDLPLLCERHATSKLQVFEDLEVISTLGFRGEALASITFVAHLSVITMTEGQAHGY 131 Query: 120 QIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + ++ RP A GT + V +LF+ + AR K+ E I DV+ R AI Sbjct: 132 KATYKDGQMQAEARPCAAVKGTQITVENLFYNVAARRKAFKNPNEEYGRILDVVSRYAIH 191 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV-----ELNEKSNEITL 233 +SF+ +R ++ + + + I V G + + + + + + Sbjct: 192 KIGISFSCKKHGDSRADVHTV-GSSSRTDTIRAVYGPGVARELIAISASDDSPQGSTFQM 250 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G ++ + +FIN R V+ + I YA +P P + + + + P Sbjct: 251 DGLISSANYS-SKRSSMVLFINDRLVECTALRKAIELVYATILPKASKPFIYMSIHLPPE 309 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 VDVNVHP K + F N + + I Q+++ + + S Sbjct: 310 HVDVNVHPTKREVSFLNQESLVDTIQQAVEAKLLESNNS 348 >gi|302799816|ref|XP_002981666.1| hypothetical protein SELMODRAFT_421150 [Selaginella moellendorffii] gi|300150498|gb|EFJ17148.1| hypothetical protein SELMODRAFT_421150 [Selaginella moellendorffii] Length = 735 Score = 307 bits (787), Expect = 3e-81, Method: Composition-based stats. Identities = 112/370 (30%), Positives = 178/370 (48%), Gaps = 9/370 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IRKL E ++N+IAAGE+I+RP+ A+KEL+ENSLDA ++ V ++ GG QITDNG Sbjct: 8 RIRKLEESVVNRIAAGEVIQRPASALKELLENSLDAGATVVSVIVKDGGLKLIQITDNGH 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +RH TSKI+ +D + T GFRGEAL S+ V+HLT+ + G Sbjct: 68 GIRYEDLPILCERHTTSKITAFEDLQRVSTLGFRGEALASMTFVAHLTVTTMTEGQTHGY 127 Query: 120 Q-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + G RP A GT + V +LF+ + AR K+ E + DVI + +I Sbjct: 128 RASYKDGAMEGDPRPCAAVKGTQIMVENLFYNVTARRKSFKNPSDEYARVVDVISKYSIQ 187 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE----ITLQ 234 PKV F+ R + N + E I V G +E+ N+ + Sbjct: 188 NPKVGFSCKKFGDARADVQT-PGNTSALEAIRAVYGPGTSRELIEIKTSKNDSSDSFEMN 246 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY ++ +FIN R V + I YA +P P + + + + Sbjct: 247 GYISSANYS-AKRTTMILFINDRLVDCAPLKRAIEVVYAAVLPKASKPYIYMSIRLPSEH 305 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHP K + F N + I ++++ + + S + + ++F P++ Sbjct: 306 VDVNVHPTKKEVSFLNQESLIEAIQTAVEQELLQSNKSRTFYAQTSLEAAFLPQGQPRSQ 365 Query: 355 LPKYATSLTN 364 ++ Sbjct: 366 AENKSSQKAP 375 >gi|170097253|ref|XP_001879846.1| predicted protein [Laccaria bicolor S238N-H82] gi|164645249|gb|EDR09497.1| predicted protein [Laccaria bicolor S238N-H82] Length = 690 Score = 307 bits (787), Expect = 3e-81, Method: Composition-based stats. Identities = 146/565 (25%), Positives = 249/565 (44%), Gaps = 42/565 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR+L E +IN+IAAGEII RP+ A+KEL+ENSLDA ++ + ++ GG QI DNG Sbjct: 10 PIRRLQESLINRIAAGEIIHRPASALKELLENSLDAGATSIRVIVKDGGMKLLQIQDNGC 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+S D S I T+GFRGEAL SI V+HL+++++ + Sbjct: 70 GIRKSDLPILAERFTTSKLSTFSDLSRIATYGFRGEALASISHVAHLSVITKTKSDTCAW 129 Query: 120 QIAI--------SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + + +P A N GTI+ V+DLF+ RL+ ++S E I DV Sbjct: 130 KAYYLDGSLVEPKPGQTPDPKPCAGNDGTIINVQDLFYNTLTRLSSIRSTSEEYARILDV 189 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV---ELNEKS 228 + + ++ PK++F S ++ ++ I + G + E N++S Sbjct: 190 LTKYSVHNPKIAFLCKKAGSAAPDLST-PSDSEISHAIRLLYGHSIAKELINVKEDNDES 248 Query: 229 NEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL 288 + + Y + +FIN R V+ + ++ Y +P G P V L L Sbjct: 249 ESWSAESYFTNTNYQAKKMVFL-LFINHRLVESPRMKRSLEAVYHTILPKGASPFVYLSL 307 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 IDPR VDVNVHP K + F N I + +IQ+A+ +G S + +S Sbjct: 308 NIDPRAVDVNVHPTKREVHFLNEDAIIERVSDAIQQALAAQGKSRAFEYQVTSLSFSCVP 367 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 K + +++ + Q ++ D + +E+S A Sbjct: 368 KNSKRMSADLFVAGIVIKKRTYSQHKVRTSLQDRTLDSMFPVVNPAQLEKSSA---NPSD 424 Query: 409 ACAQIHQNYIISQTTDGLVIV-DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 + ++ I ++ L V D A + ++ + L + + Sbjct: 425 TQSPTPKSRDIKESECFLTSVQDLRKALVKGKHRQLTEILEKHTFVGIADLQRCLSLIQY 484 Query: 468 GECALIMEHD----EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 ++ H E ++LG++ +FG + K P +LRD+I+ +++ Sbjct: 485 STKLYLINHAALADELFYQLGVR--QFGDFSRL---------KLEPPPILRDMIEIAVNA 533 Query: 524 STTYT--------LQDRIENILATM 540 + + DRIE+IL T Sbjct: 534 ENSTEDSPLSKTQIIDRIEDILMTR 558 >gi|301607766|ref|XP_002933455.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Mlh1 [Xenopus (Silurana) tropicalis] Length = 746 Score = 307 bits (787), Expect = 3e-81, Method: Composition-based stats. Identities = 113/329 (34%), Positives = 172/329 (52%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ + GG QI DNG G Sbjct: 5 IRRLEETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVTVKDGGMKLIQIQDNGTG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D SNI T+GFRGEAL SI V+H+T+ ++ + Sbjct: 65 IRKEDLDIVCERFTTSKLQSFEDLSNISTYGFRGEALASISHVAHVTITTKTADGKCAYR 124 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + K+ +P A N GT + V DLF+ I R LKS E I +V+ R AI Sbjct: 125 ASYADGKLKTPPKPCAGNQGTQISVEDLFYNISTRRKALKSPSEEHARIVEVVSRYAIHN 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + S N + I V G +E+ + + ++GY Sbjct: 185 SGISFSVKKQGETMADVRTLS-NATTVDNIRTVFGNAVSRELIEVGCEEEKLAFKMKGYV 243 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDV Sbjct: 244 TNANYSMKKCIFL-LFINARLVESTALKKAIETVYAAYLPKNTHPFLYLSLEIAPQNVDV 302 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 303 NVHPTKHEVHFLHEDSIIERVQQHIESKL 331 >gi|171690550|ref|XP_001910200.1| hypothetical protein [Podospora anserina S mat+] gi|170945223|emb|CAP71334.1| unnamed protein product [Podospora anserina S mat+] Length = 747 Score = 307 bits (787), Expect = 3e-81, Method: Composition-based stats. Identities = 122/396 (30%), Positives = 183/396 (46%), Gaps = 16/396 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L E +IN+IAAGEII P A+KEL+ENS+DA S+ V+ + GG QITDNG Sbjct: 32 RIKPLDEDVINKIAAGEIIVAPVNALKELMENSVDAGSTTVDVSVKEGGLKLLQITDNGS 91 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ QR TSK+ +D I T+GFRGEAL SI ++HLT+ ++ + Sbjct: 92 GIEKEDLPILCQRFTTSKLQKFEDLQTIATYGFRGEALASISHIAHLTVTTKTRDSECAW 151 Query: 120 QIAI--------SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + + +PV+ GT + V DLFF +P R +S E N I D+ Sbjct: 152 RGHYGSGVLVPAKPGQSPDPKPVSGRQGTQITVEDLFFNVPTRRRAFRSPANEYNKILDM 211 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVELNEKSN 229 + R AI V FT + ++ T +RI Q+ G N E + Sbjct: 212 VGRYAIHCTGVGFTCKKHGESSKGISVSPTAPCL-DRIRQIYGASVANELTEFETKDDQW 270 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 +G + R +FIN R V+ I + YA +P +P V L LE Sbjct: 271 GFKAKGLATNANY-RTKKTTLLLFINNRCVESTNIRKALEQTYASFLPKNGHPFVYLSLE 329 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 IDPR+VDVNVHP K + F N + + ++ + + S + + Sbjct: 330 IDPRRVDVNVHPTKQEVNFLNEDETIQAVCEHLRSKLAEVD--ASRTFLTQTLLPASSRA 387 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 A T LP ++ + + S L+ +D Sbjct: 388 ASSTQLPPAPSAPSMATPASSRRAPPRSDTSLVRTD 423 >gi|241954070|ref|XP_002419756.1| DNA mismatch repair protein, putative [Candida dubliniensis CD36] gi|223643097|emb|CAX41971.1| DNA mismatch repair protein, putative [Candida dubliniensis CD36] Length = 713 Score = 307 bits (786), Expect = 4e-81, Method: Composition-based stats. Identities = 123/422 (29%), Positives = 204/422 (48%), Gaps = 22/422 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I++L E +IN+IAAGEII +P+ A+KE++ENS+DA+++ +E ++ GG QITDNG Sbjct: 7 TIKRLDESVINKIAAGEIIIQPANALKEMLENSIDAKATMIEILVKDGGLKLLQITDNGH 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ ++P+ +R TSK+S +D +I T+GFRGEAL SI +S L+++++ P + Sbjct: 67 GISKVDLPLLCERFATSKLSKFEDLESIATYGFRGEALASISHISRLSVITKQPDSKVAY 126 Query: 120 QIAISGEKIS-----------SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLI 168 + ++ +P+A GT + V DLF+ IP+RL LKS+ E I Sbjct: 127 KAYYMNGQLCSSNFKPSNTNVEPKPIAGKDGTQIIVEDLFYNIPSRLRGLKSKSDEFAKI 186 Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE----L 224 D++ R AI V F+ ++N + + ERI V G N +E Sbjct: 187 LDIVGRYAIHCETVGFSCKKYGDPLQQVNTRPSMP-IKERIRVVYGSGIANELLEIDGIS 245 Query: 225 NEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 N + + + G +N Q FIN R V + + I ++ +P G + Sbjct: 246 NGELGLVKVSGVMTNANYNNKKKIQPIFFINHRLVTCEPLKRAINAVFSYFLPKGSHSFY 305 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS----TSSVLSKK 340 L LEI P +DVNVHP K +RF N I + I+ I ++ S T S+++K+ Sbjct: 306 YLSLEIKPENLDVNVHPTKREVRFLNEDEIIDIIVSEIHTKLSSVDTSRKFKTQSIITKR 365 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 S+ + + + + K+ + S P+ + + +E E Sbjct: 366 RNSNEELEEHSLPKASQPSLKKYRQENKMVRVDASQSKLSSFMQSQPSSNYHDVMKKEFE 425 Query: 401 AT 402 Sbjct: 426 YY 427 >gi|148229904|ref|NP_001090545.1| mutL homolog 1, colon cancer, nonpolyposis type 2 [Xenopus laevis] gi|117167959|gb|AAI24967.1| LOC100036779 protein [Xenopus laevis] Length = 750 Score = 306 bits (785), Expect = 4e-81, Method: Composition-based stats. Identities = 115/376 (30%), Positives = 186/376 (49%), Gaps = 8/376 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ + GG QI DNG G Sbjct: 5 IRRLEETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVTVKDGGMKLIQIQDNGTG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D SNI T+GFRGEAL S+ V+H+T+ ++ + Sbjct: 65 IRKEDLDIVCERFTTSKLQSFEDLSNISTYGFRGEALASVSHVAHVTITTKTADGKCAYR 124 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + K+ +P A N GT + V DLF+ + R LKS E I +V+ R AI Sbjct: 125 ASYADGKLKAPPKPCAGNQGTQISVEDLFYNVSTRRKALKSPSEEHARIVEVVSRYAIHN 184 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 + F+ + S N + I V G + + + ++ ++GY Sbjct: 185 SGIGFSVKKQGETMADVRTLS-NATTVDNIRTVFGNAVSRELIGVGCEEDKLAFKMKGYV 243 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I T YA +P +P + L L+I P+ VDV Sbjct: 244 TNANYSMKKCIFL-LFINARLVESTALKKAIETVYAAYLPKNTHPFLYLSLDIAPQNVDV 302 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K + F + I + Q I+ + S + + LP Sbjct: 303 NVHPTKHEVHFLHEDSIIERVQQHIESKLLGSNSSRMYFTQTLLPGHSVCASGFTKPLPA 362 Query: 358 YATSLTNTQEKLFLQE 373 +TS ++ EK++ + Sbjct: 363 SSTSQKSS-EKVYAHQ 377 >gi|260828245|ref|XP_002609074.1| hypothetical protein BRAFLDRAFT_91042 [Branchiostoma floridae] gi|229294428|gb|EEN65084.1| hypothetical protein BRAFLDRAFT_91042 [Branchiostoma floridae] Length = 717 Score = 306 bits (785), Expect = 4e-81, Method: Composition-based stats. Identities = 104/336 (30%), Positives = 179/336 (53%), Gaps = 7/336 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR+L E ++N+IAAGE+I RP+ A+KE++EN LDA+SS ++ V+ GG QI DNG Sbjct: 4 TIRRLEETVVNRIAAGEVIVRPANAVKEMLENCLDAKSSSIQVVVKSGGLKLLQIQDNGT 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+++R + Sbjct: 64 GIRRDDMGIVCERFTTSKLQKFEDLTSIATYGFRGEALASISHVAHVTIVTRTADSKCAY 123 Query: 120 QIAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + S K +++ +P A N GT + V DLF+ +P+R ++S E + +V+ R AI Sbjct: 124 KASYSDGKPLATPKPCAGNQGTQITVEDLFYNVPSRRKAMRSPGEEHAKVAEVMSRYAIH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGY 236 V FT + ++ T+ + I V G +E+ + +++G+ Sbjct: 184 NAGVGFTLKKQGESMAELRTSPTSSTI-DNIRTVYGPAVARELIEVKCDDSRLAFSMKGH 242 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 ++ +FIN R V + + Y+ +P +P V + +EI P VD Sbjct: 243 ISNANYSTKKFIFL-LFINHRLVDSTALRKALEAVYSAYLPKNMHPFVYMSVEIMPSHVD 301 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 VNVHP K + F + +I I + ++ ++ S Sbjct: 302 VNVHPTKHEVHFLHEDVIIEAIQKQVETSLLGCNSS 337 >gi|156380669|ref|XP_001631890.1| predicted protein [Nematostella vectensis] gi|156218938|gb|EDO39827.1| predicted protein [Nematostella vectensis] Length = 742 Score = 306 bits (784), Expect = 6e-81, Method: Composition-based stats. Identities = 108/343 (31%), Positives = 176/343 (51%), Gaps = 14/343 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IRKL E ++N+IAAGE+I+RP+ A+KE+IEN LDA+S+ + + GG QI DNG Sbjct: 6 SIRKLDETVVNRIAAGEVIQRPANALKEMIENCLDAKSTSITVTVKSGGLKLLQIQDNGC 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +R TSK+S +D S+I T+GFRGEAL SI V+H+T+ ++ ++ Sbjct: 66 GIRKEDMHIVCERFTTSKLSKFEDLSSISTYGFRGEALASISHVAHVTITTKTAHSSCAY 125 Query: 120 QIAISGEKISSVR--------PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + + S K+ R P A N GT + V DLF+ + R LKS E + + DV Sbjct: 126 KASYSDGKLVPPRPGLPAEPKPCAGNKGTQITVEDLFYNVATRRKALKSPGEEYSKVVDV 185 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + + +I V+FT + ST + + I + G V+++ ++ Sbjct: 186 VSKYSIHNTGVAFTLKKQGEATADVRTTST-ASLHDNIRAIYGTAVARELVDIDCDNSRL 244 Query: 231 -ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 ++G ++ +FIN R V + ++ T Y +P G +P V + L+ Sbjct: 245 GFYMKGCITNANYSVKKLIFL-LFINHRLVDSTALRRSLETVYEAYLPKGTHPFVYMSLQ 303 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 I P VDVNVHP K + F + I + + ++ + S Sbjct: 304 ITPSNVDVNVHPTKHEVHFLHEDAIVEAVQKCVEMKLLGCNTS 346 >gi|315052862|ref|XP_003175805.1| DNA mismatch repair protein mutL [Arthroderma gypseum CBS 118893] gi|311341120|gb|EFR00323.1| DNA mismatch repair protein mutL [Arthroderma gypseum CBS 118893] Length = 801 Score = 306 bits (784), Expect = 7e-81, Method: Composition-based stats. Identities = 115/370 (31%), Positives = 187/370 (50%), Gaps = 16/370 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L +IN+IAAGEII P A+KELIENS+DA S+ VE ++ GG QITDNG Sbjct: 42 KIQALDPDVINKIAAGEIIVAPMHALKELIENSVDAGSTSVEILVREGGLKLLQITDNGH 101 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++P+ +R TSK+ +D S+I T+GFRGEAL SI V+HLT+ ++ ++ Sbjct: 102 GIDNDDLPILCERFTTSKLQAFEDLSSIATYGFRGEALASISHVAHLTVTTKTAGSSCAW 161 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ +P+A GT + V DLF+ +P R +S E I D+ Sbjct: 162 RAHYSDGKLVPAKPGQSASPKPIAGRKGTQITVEDLFYNVPTRRRAFRSASEEYAKILDI 221 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVELNEKSN 229 + R A+ +F+ ++ S N + +RI Q+ G N ++E+++K Sbjct: 222 VGRYAVHCSGTAFSCKKHGEAGVSLST-SINSSIVDRIRQLHGGAVANELVSLEVDDKRW 280 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 + ++ +FIN R+V+ I + Y+ +P G +P V L LE Sbjct: 281 GCRTSAWVTNANYH-AKKTTLLIFINHRSVESTAIKRAVEQTYSTFLPKGGHPFVYLDLE 339 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P+++DVNVHP K + F N I I +I+ + + +S + + + Sbjct: 340 IEPQRLDVNVHPTKREVNFLNEDEIIESICSAIRTKLA--AVDSSRTFMTQTLLPGIRPP 397 Query: 350 APKTHLPKYA 359 P + Sbjct: 398 EPSPSARDAS 407 >gi|322706768|gb|EFY98348.1| MutL-like protein [Metarhizium anisopliae ARSEF 23] Length = 722 Score = 306 bits (784), Expect = 7e-81, Method: Composition-based stats. Identities = 136/583 (23%), Positives = 238/583 (40%), Gaps = 52/583 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KEL+EN++DA S+ +E ++ GG QITDNG Sbjct: 28 RIKALDPDVVNKIAAGEIIVAPVHALKELVENAVDAGSTALEILVKDGGLKLLQITDNGC 87 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +RH TSKI+ +D S+I T+GFRGEAL SI ++HL++ ++ + Sbjct: 88 GIEKEDLAILCERHTTSKITAFEDLSSIGTYGFRGEALASISHIAHLSVTTKTKDSPLAW 147 Query: 120 QIAISGEKISSVRP--------VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + K+ + +P VA PGT + V DLFF+IP R +S E N I D+ Sbjct: 148 RAHYLDGKMVAPKPGQPAEPKGVAGRPGTQITVEDLFFSIPTRRRAFRSYSDEFNKIIDM 207 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--SN 229 + R +I V FT + ++ QS +R+ Q+ G N V+ + Sbjct: 208 VGRYSIHCQGVGFTCKKAGESSNTLSIQSQATTL-DRVRQIYGSSVANELVDFSASDARW 266 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 Q ++ +FIN R+V+ + I Y +P G +P V L LE Sbjct: 267 GFKAQVLATNANYHIKKTTFL-LFINNRSVESANVKKAIEQTYLNFLPKGGHPFVYLSLE 325 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 IDP +VDVNVHP K + F N I + + ++ + S + + + Sbjct: 326 IDPARVDVNVHPTKREVHFLNEDEILHAVCTELESRLANVDTSRTFKTQTLLPGAKPVPE 385 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 + P +T + + R T + ++++ + + + + Sbjct: 386 SIDEDQPSPRIMVTGKRRRNSNDLVRTDTYARKITTMFSHADGGEGSKAKTSKEEEPLAV 445 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHE------RLIFEKMRQDFNSTKITSQTLLTPEII 463 I + T + + E + E + L Sbjct: 446 PENIEYETNDREMTACRLKSIKELRSEVRDNIHHDLTEIFASHTFVGIVDDSRRLAAIQS 505 Query: 464 DLLEGECALIMEHDEDLHRLGI-KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 + E ++LG+ FG IR P + LRD++ + Sbjct: 506 GVRLYLVDYGHTCFEYFYQLGLTDFGNFG----VIRFSPPL--------GLRDLLQMAAE 553 Query: 523 S--------STTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 + + ++ ++ + + + ++ EM Sbjct: 554 TEKKVLGAADHDFPVEKIVDKV-----------ANQLIERREM 585 >gi|307191602|gb|EFN75099.1| DNA mismatch repair protein Mlh1 [Harpegnathos saltator] Length = 833 Score = 306 bits (783), Expect = 8e-81, Method: Composition-based stats. Identities = 114/409 (27%), Positives = 194/409 (47%), Gaps = 7/409 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+KL E ++N+IAAGE+I+RP+ A+KELIENSLDA+++ ++ + GG QI DNG Sbjct: 6 KIKKLDEVVVNRIAAGEVIQRPANALKELIENSLDAKATNIQITVKEGGLKLLQIQDNGT 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +R TSK+ +D + + TFGFRGEAL SI V+ L++ ++ Sbjct: 66 GIRKEDMEIVCERFTTSKLQKFEDLNALTTFGFRGEALASISHVALLSITTKTADEKCAY 125 Query: 120 QIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + K+ P A N GTI+ + +LF+ +P R L S E IT+V+ R A+ Sbjct: 126 KASYLNSKLKAPPVPCAGNQGTIITIENLFYNVPTRRKALSSSSEEFTKITEVVMRYAVH 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVELNEKSNEITLQGY 236 V FT ++ N I + G VELN+KS + + Sbjct: 186 NQAVGFTLKKHGEPSPQVRT-PHNSTKQNNIRILYGNPVARELLEVELNDKSYKFQMHAL 244 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P + +FIN R V I + Y +P +P + L+I+P+ +D Sbjct: 245 VTNPNYT-NKRMLMLLFINNRLVDSSSIRKMLEDLYTVYLPKKAHPWCYISLDINPQNID 303 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHP K +RF + I I ++ + + S + L ++ + + + LP Sbjct: 304 VNVHPTKHEVRFLHEDAIIEKIKFALDERLTGSSASRTFYLQARLPKADITKDILEEVLP 363 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 ++ + +K+ +E + + D ++ + ++ Sbjct: 364 EHKKGNPDKSKKIHAREMIRTDSSDQKLDKFNFTIHSAFKHGKSNHNFP 412 >gi|85108177|ref|XP_962522.1| hypothetical protein NCU08309 [Neurospora crassa OR74A] gi|28924130|gb|EAA33286.1| hypothetical protein NCU08309 [Neurospora crassa OR74A] Length = 751 Score = 306 bits (783), Expect = 8e-81, Method: Composition-based stats. Identities = 114/343 (33%), Positives = 173/343 (50%), Gaps = 14/343 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L ++N+IAAGEII P A+KEL+EN++DA S+ +E V+ GG QITDNG Sbjct: 30 RIRPLDPDVVNKIAAGEIIVAPVHALKELMENAVDAGSTSLEIVVKDGGLKLLQITDNGC 89 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+ +D +I T+GFRGEAL SI ++HLT+ ++ ++N Sbjct: 90 GIDKQDLPILCERFTTSKLQKFEDLQSISTYGFRGEALASISHIAHLTVTTKTQESNCAW 149 Query: 120 QIAISGEKI--------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + K+ +PVA GT + V DLF+ IP R +S E N I D+ Sbjct: 150 RAHYGSGKLVPAKPGQSPDPKPVAGRQGTQITVEDLFYNIPTRRRAFRSTSDEYNKIIDM 209 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--SN 229 + R A+ V+F+ + + Q+ + +RI Q+ G N +E + Sbjct: 210 VGRYAVHCSHVAFSCKKYGESSTSIAIQANASST-DRIRQIYGGSVANELIEYSTSDDRW 268 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 QG ++ +FIN R V+ I + YA +P +P V L LE Sbjct: 269 GFKAQGLATNANYS-LKKTTLLLFINHRCVESSNIRKAVEQTYASFLPKNGHPFVYLSLE 327 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 I P +VDVNVHP K + F N I I + I+ + S Sbjct: 328 IAPERVDVNVHPTKREVNFLNEHEIIQAICEHIRSKLAAVDTS 370 >gi|238859665|ref|NP_001154957.1| mutL homolog 1 [Nasonia vitripennis] Length = 752 Score = 306 bits (783), Expect = 9e-81, Method: Composition-based stats. Identities = 119/405 (29%), Positives = 194/405 (47%), Gaps = 8/405 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL E ++N+IAAGEII+RP+ A+KELIENSLDA+++ ++ + GG QI DNG Sbjct: 6 KIRKLDETVVNRIAAGEIIQRPANALKELIENSLDAKATNIQVSVKEGGMKLLQIQDNGT 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+ DD +I TFGFRGEAL SI V+HLT+ ++ Sbjct: 66 GIRKDDLDIVCERFTTSKLQTFDDLKSISTFGFRGEALASISHVAHLTITTKTANEKCAY 125 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + K+ A N GTI+ V +LF+ + R L S E + I +V+ R A+ Sbjct: 126 KASYLDGKLKEPPTRCAGNQGTIITVENLFYNVATRRKALNSPSEELSKINEVVTRYAVH 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL--NEKSNEITLQGY 236 P V FT + + I + G + +E+ ++ + L Sbjct: 186 NPSVGFTLKKYGEA-ANLVRTPHSSTNINNIRLLFGNNIAKELLEVKLDDARYKFKLHAL 244 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 ++ G +FIN R V I T+ Y+ +P +P + LEI+P+ VD Sbjct: 245 VTNANYS-GKRMMLLLFINHRLVDSSAIKKTLEDIYSVYLPKKAHPWCYISLEIEPQNVD 303 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHP K +RF + I I S+ + + S + + K+ + + +LP Sbjct: 304 VNVHPTKYEVRFLHEEAIIEKIKISLDEKLASNDASRTFYIQAKLPQVNITEEVLEENLP 363 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPS-DDPTYSEDNDPVEESE 400 + K ++ + T+ D ++ + + +E E Sbjct: 364 GTQEQADKDKTKKVHPKDMIRTSSSDQKLDKFNFTINKNDLENPE 408 >gi|302894255|ref|XP_003046008.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256726935|gb|EEU40295.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 702 Score = 306 bits (783), Expect = 9e-81, Method: Composition-based stats. Identities = 135/534 (25%), Positives = 221/534 (41%), Gaps = 30/534 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M + L ++N+IAAGEII P A+KELIEN++DA ++ ++ + GG QITDNG Sbjct: 6 MGAQALDPNVVNKIAAGEIIVAPVHALKELIENAVDAGATSLDVMAKDGGLKLLQITDNG 65 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ + +RH TSKIS +D S I T+GFRGEAL SI ++HL++ ++ ++ Sbjct: 66 CGIQKDDLAILCERHTTSKISTFEDLSAIETYGFRGEALASISHIAHLSVTTKTKDSDLA 125 Query: 119 AQIAISGEKISSVRP--------VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITD 170 + ++++ +P VA PGT + V DLF+ +P R +S E N I D Sbjct: 126 WRAHYLDGRLTAPKPGQSAEPRGVAGRPGTQITVEDLFYNVPTRRRAFRSTADEFNKIID 185 Query: 171 VIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--S 228 ++ R A+ V FT ++ Q+ + +RI Q+ G N + Sbjct: 186 MVGRYAVHCKGVGFTCKKAGEASTSLSVQA-HATVIDRIRQIHGSSVANELLAFATSEDR 244 Query: 229 NEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL 288 +GYT ++ +FIN R V+ I + Y+ +P +P + L L Sbjct: 245 WGFKAEGYTTNANYS-VKKTTLLLFINHRCVESTHIKKAVEQTYSNFLPKNGHPFIYLSL 303 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS--SVLSKKMISSFH 346 EIDP +VDVNVHP K + F N I I + I+ + S + + Sbjct: 304 EIDPARVDVNVHPTKKEVHFLNEDEIIQAICEHIESKLAAVDTSRTFMTQTLLPGAKPVE 363 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 P T T + R T + + + ++ ++ Sbjct: 364 STQTESDGTPSRRTPATKRVRRNSNDLVRTDTAERKITSMFVRAGPSESTASNDHAGDAS 423 Query: 407 GIACAQIHQNYIISQTTDGLVIV-----DQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 A ++ L + D + E + Q L Sbjct: 424 AAPEALEYETVDRETVQCRLNSIKQLRHDVREDMHNELTEIFSSHTFVGIVDDQRRLAAI 483 Query: 462 IIDLLEGECALIMEHDEDLHRLGI-KAERFGPNAIAIREIPAILSKKNIPQLLR 514 D+ E ++LG+ FG IR PA+ ++ +LLR Sbjct: 484 QGDVKLYLIDYGRTCFEYFYQLGLTDFGNFG----TIRFGPAL----DLRELLR 529 >gi|212703793|ref|ZP_03311921.1| hypothetical protein DESPIG_01841 [Desulfovibrio piger ATCC 29098] gi|212672761|gb|EEB33244.1| hypothetical protein DESPIG_01841 [Desulfovibrio piger ATCC 29098] Length = 711 Score = 305 bits (782), Expect = 1e-80, Method: Composition-based stats. Identities = 124/395 (31%), Positives = 212/395 (53%), Gaps = 12/395 (3%) Query: 12 NQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ + GG+S ++ D+G G+ E+ +A Sbjct: 3 NQIAAGEVVERPASVVKELVENSLDAGATRVDVFLENGGQSCIRVQDDGAGIAPGELELA 62 Query: 72 VQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA---QIAISGE 126 V RH TSKI+ DD +I ++GFRGEALPSI +V+ ++ S + G +I + Sbjct: 63 VTRHATSKIASMDDLEHIASYGFRGEALPSIASVARFSMESAVTGADGGTEASRIVVEFG 122 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 ++ +V P A++ GTIVEVRDLF IPARL FLK+ E D + R+A+A V FT Sbjct: 123 RLLAVEPSALHRGTIVEVRDLFTNIPARLKFLKTPATELKRAQDWLVRLALARCDVGFTL 182 Query: 187 STIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGN 246 + + + +R++Q+ + + + + I +G +P+ ++ Sbjct: 183 RAGEREALRFL---PGQSLRDRLAQLWPRLVVEALRPFDAERHGIRARGLAALPSVSQQR 239 Query: 247 ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYI 306 ++ +++NGR+V DK +L+ +R AY I YP VVL +++ P VDVNVHPAKS + Sbjct: 240 GDRILLYVNGRSVSDKRLLAAVREAYKGRITSRDYPQVVLFVDMPPDMVDVNVHPAKSEV 299 Query: 307 RFRNPTIIRNFIIQSIQKAINKKGIS----TSSVLSKKMISSFHQDNAPKTHLPKYATSL 362 RFR+ + + + ++ ++Q A+ S + +++ + P+ Sbjct: 300 RFRDESSVFSAVLHAVQGALVSDVESVLDAAREADDARPVAAQSRLWDDLPPRPQGFWGS 359 Query: 363 TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 + + +E+ ++ ++D E Sbjct: 360 ADAAPLMRHEEDETREDEGQWQVRRPDADDGTCPE 394 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 111/263 (42%), Gaps = 17/263 (6%) Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 + + P+ P + T L + D D Sbjct: 459 FFESARQTARTAMPPEHVAPMAGQDDAGHAAEQAHTPETDGTEVLPGAGDAACGPDTAVT 518 Query: 397 EESEATHYQ----LGIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTK 451 +ES A ++ Q+ + Y++ + G L+++DQHAAHER+++E++R+ + Sbjct: 519 DESAAGRHELVVGGLTYLGQVAETYLVLRDASGALMLLDQHAAHERVLYERLRKGAFAGT 578 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 L P + L E +E ++L R+G G +A R IP LS+ + Sbjct: 579 AQCLAL--PLELALQPVEEERFLEVRDNLERMGFDVSCSGGRLLA-RGIPPSLSRSEAGE 635 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 LR+++ +D I + +++C G+I++G+++ E LLR+ P Sbjct: 636 FLREVLA---------GRKDDIRAMFISLSCKGAIKAGQRLADDEAAALLRQWLHTPERE 686 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP+ ++ +EKLF R Sbjct: 687 YCPHGRPSILRWDAVALEKLFKR 709 >gi|13591989|ref|NP_112315.1| DNA mismatch repair protein Mlh1 [Rattus norvegicus] gi|13878571|sp|P97679|MLH1_RAT RecName: Full=DNA mismatch repair protein Mlh1; AltName: Full=MutL protein homolog 1 gi|1724118|gb|AAB38506.1| mismatch repair protein [Rattus norvegicus] Length = 757 Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats. Identities = 106/329 (32%), Positives = 169/329 (51%), Gaps = 7/329 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+ EN LDA+S+ ++ ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMTENCLDAKSTNIQVIVREGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D + I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLAMISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT++ V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLITVEDLFYNIITRKKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 +SF+ + N + I + G +E+ + + GY Sbjct: 188 SGISFSVKKQGETVSDVRTLP-NATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGYI 246 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V+ + I YA +P +P + L+LEI P+ VDV Sbjct: 247 SNANYSVKKCIFL-LFINHRLVESAALKKAIEAVYAAYLPKNTHPFLYLILEISPQNVDV 305 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 NVHP K + F + I + Q I+ + Sbjct: 306 NVHPTKHEVHFLHEESILERVQQHIESKL 334 >gi|242008773|ref|XP_002425174.1| DNA mismatch repair protein MlH1, putative [Pediculus humanus corporis] gi|212508876|gb|EEB12436.1| DNA mismatch repair protein MlH1, putative [Pediculus humanus corporis] Length = 657 Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats. Identities = 116/330 (35%), Positives = 180/330 (54%), Gaps = 7/330 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+KL E +IN+IAAGE+I+RP A+KELIENS+DA+SS+++ + GG QI+DNG Sbjct: 6 SIKKLDEAVINRIAAGEVIQRPYNALKELIENSIDAKSSKIQITVKDGGLKLLQISDNGT 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +R TSK+S +D + I T+GFRGEAL SI V+HLT++++ N G Sbjct: 66 GIRKEDLDIVCERFTTSKLSKFEDLTKISTYGFRGEALASISHVAHLTIVTKTADNQCGY 125 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + K+ + +P A+ GT + V +LF+ +P R N LKS E + + DV+R+ AI Sbjct: 126 KASYVDSKLKNPPKPCAVEKGTQIIVEELFYNVPTRKNALKSPAEEYSKVLDVVRKYAIH 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN--EITLQGY 236 K++F+ K +N N + I + G +E+ + + + +QG Sbjct: 186 NSKIAFSLKKHKETLSDVNT-PQNSTSVDNIRLIYGASIAKELLEVKDSDDTLKFQVQGQ 244 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 ++ +FIN R V + S I Y+ +P YP V L L I P +D Sbjct: 245 ITNVNYSNKKFTFL-LFINDRLVNSSSLKSIIEQVYSIYLPKNNYPFVYLSLTICPENID 303 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 VNVHP K + F + I N I +K + Sbjct: 304 VNVHPTKHEVHFLHEENIVNKIKAIFEKTL 333 >gi|156049801|ref|XP_001590867.1| hypothetical protein SS1G_08608 [Sclerotinia sclerotiorum 1980] gi|154693006|gb|EDN92744.1| hypothetical protein SS1G_08608 [Sclerotinia sclerotiorum 1980 UF-70] Length = 745 Score = 305 bits (781), Expect = 2e-80, Method: Composition-based stats. Identities = 114/343 (33%), Positives = 176/343 (51%), Gaps = 14/343 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KELIEN++DA S+ +E ++ GG QITDNG Sbjct: 33 RIKALDPDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSIEVLVKDGGLKLLQITDNGH 92 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +R TSK+ +D ++I T+GFRGEAL SI ++HLT+ +R +N Sbjct: 93 GINKEDMAILCERFTTSKLKQFEDLTSIGTYGFRGEALASISHIAHLTVTTRTKDSNCAF 152 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + ++ +P+A GT + V DLF+ IP R +S E N I DV Sbjct: 153 RAHYDSGRLIPAKPGQGSDPKPIAGRAGTQITVEDLFYNIPTRRRAFRSASEEYNKILDV 212 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN--EKSN 229 + R AI ++F+ ++ Q + +RI Q+ G N +E + Sbjct: 213 VGRYAIHCDGIAFSCKKHGEASTTISTQIASSTV-DRIRQIHGSGVANELIEFKSADPRW 271 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 T QG+T ++ +FIN R+V+ I I Y+ +P G +P L LE Sbjct: 272 GFTAQGWTTNANYH-VKKTTLLLFINHRSVESTAIRKAIEQTYSAFLPKGGHPFTYLNLE 330 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 I+P+++DVNVHP K + F N I I I+ + S Sbjct: 331 IEPQRLDVNVHPTKREVNFLNEEEIIEKICADIRIKLADVDKS 373 >gi|327299736|ref|XP_003234561.1| DNA mismatch repair protein Mlh1 [Trichophyton rubrum CBS 118892] gi|326463455|gb|EGD88908.1| DNA mismatch repair protein Mlh1 [Trichophyton rubrum CBS 118892] Length = 816 Score = 305 bits (781), Expect = 2e-80, Method: Composition-based stats. Identities = 115/362 (31%), Positives = 182/362 (50%), Gaps = 14/362 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L +IN+IAAGEII P A+KELIENS+DA S+ VE ++ GG QITDNG Sbjct: 58 KIQALDPDVINKIAAGEIIVAPMHALKELIENSVDAGSTSVEILVREGGLKLLQITDNGH 117 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+ +D S+I T+GFRGEAL SI V+HLT+ ++ ++ Sbjct: 118 GIDHDDLSILCERFTTSKLQAFEDLSSIATYGFRGEALASISHVAHLTVTTKTAGSSCAW 177 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ +P+A GT + V DLF+ +P R +S E I D+ Sbjct: 178 RAHYSDGKLVPAKPGQNASPKPIAGRKGTQITVEDLFYNVPTRRRAFRSASEEYAKILDI 237 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVELNEKSN 229 + R A+ +F+ ++ S N + +RI Q+ G N ++E++ K Sbjct: 238 VGRYAVHCSGTAFSCKKHGEAGVSLST-SINSSIVDRIRQLHGGAVANELVSLEVDGKRW 296 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 + ++ +FIN R V+ I + Y+ +P G +P V L LE Sbjct: 297 GCHTSAWVTNANYH-AKKTALLIFINHRAVESTAIKRAVEQTYSTFLPKGGHPFVYLDLE 355 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P+++DVNVHP K + F N I I +I+ + S + + + + Sbjct: 356 IEPQRLDVNVHPTKREVNFLNEDEIIESICTAIRTKLAAVDSSRTFMTQTLLPGIRPPEP 415 Query: 350 AP 351 AP Sbjct: 416 AP 417 >gi|198427900|ref|XP_002122535.1| PREDICTED: similar to mutL homolog 1, colon cancer, nonpolyposis type 2 [Ciona intestinalis] Length = 697 Score = 305 bits (780), Expect = 2e-80, Method: Composition-based stats. Identities = 118/412 (28%), Positives = 189/412 (45%), Gaps = 15/412 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L E ++N+IAAGE+I+RP+ A+KE+IEN LDA S+ + + GG QI+DNG G Sbjct: 9 IKRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAGSTTITVSLKSGGLKMLQISDNGHG 68 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ DD I TFGFRGEAL SI V+HL++ SR + G + Sbjct: 69 IRREDMEIVCERFTTSKLKEFDDLKTIATFGFRGEALASISHVAHLSITSRTKDSKCGYK 128 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + +I S RP A N GT + V DLF+ +P R KS E I DV+ R A+ Sbjct: 129 ASYLDGRIKGSPRPTAGNTGTQITVEDLFYNVPTRRKAFKSPSEEHQKIADVMTRYALHN 188 Query: 180 PKVSFTFSTIKSN----RYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ- 234 SFT + +F I + G +E+ ++ L+ Sbjct: 189 SGKSFTLRKTDGDSGPSGGVSVRTQLGSSFVTNIGTLFGSKVAKEVIEVKHYDTQLQLKT 248 Query: 235 -GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 GY + +FIN R V + ++ + Y +P G +P V L LE+ Sbjct: 249 FGYISNANCSMKKFVFL-LFINNRLVDCSVLKKSLDSVYQSYLPKGSHPFVYLSLEMPTN 307 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-----SVLSKKMISSFHQD 348 +DVNVHP K + F + + + + ++ ++ S + +L ++ Sbjct: 308 NLDVNVHPTKHEVHFLHEDEVVTSVQKQVEASLLSCDSSRTFYMQVKLLPTNTSKPTGEN 367 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 T + T +++ + + + L D N VEE + Sbjct: 368 TKESTKDTTHPTKDKQLPTRVYDHQLVRTDSKLQKLDSFLLKSKNKVVEEPK 419 >gi|326503044|dbj|BAJ99147.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 724 Score = 304 bits (779), Expect = 3e-80, Method: Composition-based stats. Identities = 106/380 (27%), Positives = 183/380 (48%), Gaps = 10/380 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L E ++N+IAAGE+I+RPS A+KEL+ENS+DA SS + + GG Q++D+G Sbjct: 15 RIRRLEESVVNRIAAGEVIQRPSSAVKELVENSIDAGSSTISVTVKDGGLKLIQVSDDGH 74 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +RH TSK+S +D I + GFRGEAL S+ V H+T+ + G Sbjct: 75 GIRCEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEGQLHGY 134 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + + +P A GT + V +LF+ + AR L++ + I D I R A+ Sbjct: 135 RVSYRDGVMENDPKPCAAVKGTQIMVENLFYNMVARRKTLQNSNDDYPKIVDFISRFAVH 194 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE-----ITL 233 + V+F+ +NR ++ ST+ + I V G + + +E+ + Sbjct: 195 HINVNFSCRKHGANRADVHSGSTSSRL-DAIRNVYGASVVRDLMEIQVSDENAVDEIFKM 253 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G+ + +FIN R V + Y+ +P P + + + + P Sbjct: 254 DGFISNANYVAKKTTMI-LFINDRLVDCTSLKRATEFVYSAILPQASKPFIYMSINLPPE 312 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 VDVN+HP K + N I I +I+K + + S+ Q N K Sbjct: 313 HVDVNIHPTKKEVSLLNQERIIEKIKDAIEKKLVNCNNTRIFQTQALNPSALTQANTRKD 372 Query: 354 HLPKYATSLTNTQEKLFLQE 373 + +T +K+ + + Sbjct: 373 MGTEVSTPTGEKSQKIPVSQ 392 >gi|190346345|gb|EDK38404.2| hypothetical protein PGUG_02502 [Meyerozyma guilliermondii ATCC 6260] Length = 678 Score = 304 bits (778), Expect = 3e-80, Method: Composition-based stats. Identities = 118/416 (28%), Positives = 200/416 (48%), Gaps = 24/416 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I KL +IN+IAAGEII +P+ A+KELIENS+DA S+ V+ ++ GG QITDNG Sbjct: 8 TITKLDSSVINRIAAGEIIIQPANALKELIENSIDAGSTSVDILVKDGGIKLLQITDNGH 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +R TSK++ +D +I T+GFRGEAL SI ++ L+++++ ++ Sbjct: 68 GIHKEDLQLLCERFATSKLAKFEDLESISTYGFRGEALASISHIARLSVVTKTKTSDLAY 127 Query: 120 QIAI----------SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLIT 169 + + ++ +P A GT + V DLF+ +P+RL LKS+ E + I Sbjct: 128 KAFYLGGKLVGQNFNTNAVAEPKPTAGTDGTQLTVEDLFYNMPSRLKSLKSKNDEYSKIL 187 Query: 170 DVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV------- 222 DV+ R AI V F+ + ++ + ERI V G N+ + Sbjct: 188 DVVGRYAIHCQNVGFSCKKYGESHQALSTRPHVS-LKERIRIVQGSAIANDLIDLESIKN 246 Query: 223 -ELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY 281 + + ++++G + + +FIN R V + +I AY +P G + Sbjct: 247 KDHAKSVGLLSVEGAITSSDYMNKKKVEPVLFINHRLVSCGPLKRSILAAYYFFLPKGNH 306 Query: 282 PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG---ISTSSVLS 338 P + L LEI+PR VDVN+HP K +RF N I + +Q ++ + + Sbjct: 307 PFIYLSLEIEPRNVDVNIHPTKREVRFLNEDEIIEIVTDLVQSTLSSHDSARKIPTQTVL 366 Query: 339 KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 K + + K + +Q KL + ++ +DD + ++ Sbjct: 367 SKPRTQPTEPPTKKYRQENKLVRVDASQAKLSFLVPTSADSNPSKTDDSIITSSSE 422 >gi|50287749|ref|XP_446304.1| hypothetical protein [Candida glabrata CBS 138] gi|49525611|emb|CAG59228.1| unnamed protein product [Candida glabrata] Length = 723 Score = 304 bits (778), Expect = 3e-80, Method: Composition-based stats. Identities = 117/385 (30%), Positives = 189/385 (49%), Gaps = 11/385 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L ++N+IAAGEII P A+KE++ENS+DA ++ +E ++ GG Q++DNG Sbjct: 3 KIRALDPSVVNKIAAGEIIISPVNALKEILENSIDAGATMLEILVRDGGIKLLQVSDNGC 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+++ D NI T+GFRGEAL SI ++ L++ ++ Sbjct: 63 GIQLDDLPLLCERFATSKLTNFQDLENIATYGFRGEALASISHIARLSVTTKTNDEQCAY 122 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + K+ +PVA GT + V DLF+ IP+RL LK+ E I DV+ R I Sbjct: 123 KVSYNEGKMVDKPKPVAGKNGTSIHVEDLFYNIPSRLRALKTPNEEFTRILDVVGRYGIH 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI----TLQ 234 + F+ + Y + + +RI + G + + + SNE + Sbjct: 183 SKGIGFSCKKFGDSSYSITLKPDFTTI-DRIRSIYGNNVATSIIGFEMDSNENLGLTKVS 241 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GY N + Q FIN R V + I Y +P G P + L + I P Sbjct: 242 GYISTSNLNNKKSVQPIFFINDRLVTCDPLRRAIYNTYTNYLPKGTRPFIYLSINISPPS 301 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAP 351 VDVNVHP K +RF + I + I SI ++K + + V+ K ++ Sbjct: 302 VDVNVHPTKREVRFLHQDEIIDEITTSINDQLSKLDTTRTFNRGVMMSKPLTDNSSTKYS 361 Query: 352 KTHLPKYATSLTNTQEKLFLQENRL 376 + P + ++Q EN+L Sbjct: 362 QAATPTTTHPMNSSQTSQRRYENKL 386 >gi|289619584|emb|CBI53867.1| putative MLH1 protein [Sordaria macrospora] Length = 752 Score = 304 bits (778), Expect = 4e-80, Method: Composition-based stats. Identities = 116/343 (33%), Positives = 174/343 (50%), Gaps = 14/343 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L ++N+IAAGEII P A+KEL+EN++DA S+ +E V+ GG QITDNG+ Sbjct: 34 RIRALDPDVVNKIAAGEIIIAPVHALKELMENAVDAGSTSLEIVVKDGGLKLLQITDNGY 93 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+ +D +I T+GFRGEAL SI V+HLT+ ++ ++N Sbjct: 94 GIDKQDLPILCERFTTSKLQKFEDLQSISTYGFRGEALASISHVAHLTVTTKTQESNCAW 153 Query: 120 QIAISGEKI--------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + K+ +PVA GT + V DLF+ IP R +S E N I D+ Sbjct: 154 RAHYGSGKLVPAKPGQSPDPKPVAGRQGTQITVEDLFYNIPTRRRAFRSTSDEYNKIIDM 213 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--SN 229 + R A+ V+F+ + + Q+T + +RI Q+ G N +E + Sbjct: 214 VGRYAVHCSHVAFSCKKHGESSTSITIQATASST-DRIRQIYGGSVANELIEYSTSDDRW 272 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 G +N +FIN R V+ I + YA +P +P V L LE Sbjct: 273 GFKAMGLATNANYN-LKKTTLLLFINHRCVESSNIRKAVEQTYASFLPKNGHPFVYLSLE 331 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 I P +VDVNVHP K + F N I I + I+ + S Sbjct: 332 IAPERVDVNVHPTKREVNFLNEHEIIQAICEHIRSKLAAVDTS 374 >gi|219963259|gb|ACL68184.1| MutL-like protein [Sordaria macrospora] Length = 748 Score = 304 bits (778), Expect = 4e-80, Method: Composition-based stats. Identities = 116/343 (33%), Positives = 174/343 (50%), Gaps = 14/343 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L ++N+IAAGEII P A+KEL+EN++DA S+ +E V+ GG QITDNG+ Sbjct: 30 RIRALDPDVVNKIAAGEIIIAPVHALKELMENAVDAGSTSLEIVVKDGGLKLLQITDNGY 89 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+ +D +I T+GFRGEAL SI V+HLT+ ++ ++N Sbjct: 90 GIDKQDLPILCERFTTSKLQKFEDLQSISTYGFRGEALASISHVAHLTVTTKTQESNCAW 149 Query: 120 QIAISGEKI--------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + K+ +PVA GT + V DLF+ IP R +S E N I D+ Sbjct: 150 RAHYGSGKLVPAKPGQSPDPKPVAGRQGTQITVEDLFYNIPTRRRAFRSTSDEYNKIIDM 209 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--SN 229 + R A+ V+F+ + + Q+T + +RI Q+ G N +E + Sbjct: 210 VGRYAVHCSHVAFSCKKHGESSTSITIQATASST-DRIRQIYGGSVANELIEYSTSDDRW 268 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 G +N +FIN R V+ I + YA +P +P V L LE Sbjct: 269 GFKAMGLATNANYN-LKKTTLLLFINHRCVESSNIRKAVEQTYASFLPKNGHPFVYLSLE 327 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 I P +VDVNVHP K + F N I I + I+ + S Sbjct: 328 IAPERVDVNVHPTKREVNFLNEHEIIQAICEHIRSKLAAVDTS 370 >gi|3192877|gb|AAC19117.1| mutL homolog [Drosophila melanogaster] Length = 663 Score = 303 bits (777), Expect = 4e-80, Method: Composition-based stats. Identities = 138/565 (24%), Positives = 243/565 (43%), Gaps = 66/565 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL E ++N+IAAGEII+RP+ A+KEL+ENSLDA+S+ ++ + GG QI DNG G Sbjct: 10 IRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQDNGTG 69 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK++ +D S I TFGFRGEAL SI V+HL++ ++ + G + Sbjct: 70 IRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYK 129 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + K+ +P A N GTI+ + DLF+ +P R L+S E +++V+ R A+ Sbjct: 130 ATYADGKLQGQPKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEEFQRLSEVLARYAVHN 189 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V FT + + + E I + G +E + + + I Sbjct: 190 PRVGFTLRKQGDAQPALRT-PVASSRSENIRIIYGAAISKELLEFSHRDEVYKFEAECLI 248 Query: 240 PTFNRGNANQFY-VFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 N +FIN R V+ + +++ + YA +P G +P V + L + P+ +DVN Sbjct: 249 TQVNYSAKKCQMLLFINQRLVESTALRTSVDSIYATYLPRGHHPFVYMSLTLPPQNLDVN 308 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI----------NKKGISTSSVLSKKMISSFHQD 348 VHP K + F I + I Q ++ + + + + L + ++ Q Sbjct: 309 VHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTFYKQLRLPGAPDLDETQLADKTQR 368 Query: 349 NAPKTHLPKYATSLT------------------NTQEKLFLQENRLSTNDLLPSDDPTYS 390 PK + +T ++QE L E S + S Sbjct: 369 IYPKEMVRTDSTEQKLDKFLAPLVKSDSGVSSSSSQEASRLPEESFRVTAAKKSREVRLS 428 Query: 391 EDNDPVEESEATHYQLGI-------ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 D + E + + + Q L + + + E L +++M Sbjct: 429 SVLDMRKRVERQCSVQLRSTLKNLVYVGCVDERRALFQHETRLYMCNTRSFSEELFYQRM 488 Query: 444 RQDFNS-TKITSQTLLTPEIIDL-------------LEGECALIMEHDEDLHR------- 482 +F + ++IT L + + + E + L + L + Sbjct: 489 IYEFQNCSEITICPPLPLKELLILSLESRAAGWTPEDEDKAELADGAADILLKKAPIMRE 548 Query: 483 -LGIKAERFGPNAIAIREIPAILSK 506 G++ G + +P++L + Sbjct: 549 YFGLRISEDG----MLESLPSLLHQ 569 >gi|255953937|ref|XP_002567721.1| Pc21g06790 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589432|emb|CAP95576.1| Pc21g06790 [Penicillium chrysogenum Wisconsin 54-1255] Length = 764 Score = 303 bits (777), Expect = 4e-80, Method: Composition-based stats. Identities = 140/621 (22%), Positives = 235/621 (37%), Gaps = 67/621 (10%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTS 65 L ++N+IAAGEII P A+KELIEN++DA S+ VE +I GG QITDNG G+ Sbjct: 36 LDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSVEVLIKEGGLKLLQITDNGHGIDR 95 Query: 66 EEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAI 123 +++P+ +R TSK+ +D ++I T+GFRGEAL SI ++HLT+ ++ ++ + Sbjct: 96 DDLPILCERFTTSKLKEFEDLTSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAWRAHY 155 Query: 124 SGEKISSVRP--------VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 K+ +P A GT + V DLF+ +P R +S E I DV+ R Sbjct: 156 GDGKLIPAKPGQNAAPKATAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDVVGRY 215 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL-- 233 A+ V+F+ + ++ + N +RI Q+ G N VE + + Sbjct: 216 AVHCSGVAFSCRKHGDSGVSIST-PVSANTIDRIRQIHGSAVANELVEFKTEDMKFGFRA 274 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G ++ +FIN R V+ + + Y+ +P G +P V L LEI+P Sbjct: 275 SGLATNANYH-VKKTVILLFINHRAVESTAVKRAVEQTYSAFLPKGGHPFVYLDLEIEPN 333 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS-----TSSVLSKKMISSFHQD 348 +VDVNVHP K + F N I + I+ + + S S + + I S +D Sbjct: 334 RVDVNVHPTKREVNFLNEDEIIELVCTEIRSKLAEVDSSRTFLTQSLLPGVQAIESIQRD 393 Query: 349 NAPKTH-----------LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 H PK + E ++ + S + Sbjct: 394 QGAPVHEGTAEAIKAGATPKTPATTKKPYENNLIRTDSKVRKITAMLGPAAASPRDPSNP 453 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIV--------DQHAAHERLIFEKMRQDFNS 449 E+ + Y + + + + + E Sbjct: 454 EAPTETDTPTTSILDNGLQYETTDRQPLKIALTSVKSLRASVRSEMHNTLTEMFASHTYV 513 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 + + L + + E +++G FG + + + Sbjct: 514 GLVDERRRLAAIQSGVKLYLIDYGLACHEFFYQVG--LTDFGNFGVI---------RLDP 562 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM--NRLLREMEKN 567 L D++ +S + E SI + + EM L+ E Sbjct: 563 APKLVDLLKIAAESERQEHAESNGEEA-------DSIFAN----APEMIARTLIDRREML 611 Query: 568 PNSS---QCNHGRPTFIKLKL 585 HG T + + L Sbjct: 612 NEYFSMQISPHG--TLLTIPL 630 >gi|115615225|ref|XP_793318.2| PREDICTED: similar to DNA mismatch repair protein homolog [Strongylocentrotus purpuratus] gi|115932300|ref|XP_001176052.1| PREDICTED: similar to DNA mismatch repair protein homolog [Strongylocentrotus purpuratus] Length = 745 Score = 303 bits (777), Expect = 4e-80, Method: Composition-based stats. Identities = 112/336 (33%), Positives = 178/336 (52%), Gaps = 7/336 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IRKL E ++N+IAAGE+I+RP+ A+KE+IEN LDA+S+ ++ + GG QI DNG Sbjct: 4 TIRKLDETVVNRIAAGEVIQRPANALKEMIENCLDAKSTSIQVTVKSGGMKLLQIQDNGT 63 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+ + D ++I T+GFRGEAL SI V+H+T+++R + Sbjct: 64 GIRKDDMDIVCERFTTSKLREFNDLTSISTYGFRGEALASISHVAHVTIVTRTEDSKCAY 123 Query: 120 QIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + S K+ +++P A N GT + V DLF+ + R LKS E N I++V+ R AI Sbjct: 124 KGNFSDGKLKAAIKPCAGNRGTQITVEDLFYNVATRRKALKSASEEHNKISEVVSRYAIH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN--EITLQGY 236 V+FT + + S N + + I V G +E+N +++ L G Sbjct: 184 NAGVAFTLKKSGESTADVRT-SQNASTVDNIRSVFGPTVARELLEINHENSGLGFKLSGQ 242 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 ++ F +FIN R V + I Y+ +P +P + LEI P VD Sbjct: 243 ISNANYS-VKRLIFLLFINHRLVDSSSLRKAIEAVYSTYLPKNAHPFIYFSLEIAPHNVD 301 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 VNVHP K + F + I I + +++ + S Sbjct: 302 VNVHPTKHEVHFLHEEAIIEDIQKCLEQKLLGCNSS 337 >gi|320583166|gb|EFW97382.1| hypothetical protein HPODL_1160 [Pichia angusta DL-1] Length = 652 Score = 303 bits (777), Expect = 5e-80, Method: Composition-based stats. Identities = 136/534 (25%), Positives = 238/534 (44%), Gaps = 26/534 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E ++N+IAAGEI+ P A+KEL+ENS+DA+++ ++ GG QITDNG Sbjct: 5 RIRPLEEAVVNRIAAGEIVLAPYSALKELLENSIDAQATSIDVACKEGGLKLLQITDNGV 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+ +D +I T+GFRGEAL SI ++H++L+++ + Sbjct: 65 GIAKDDLAIVCERFTTSKLRKFEDLQHIATYGFRGEALASISHIAHVSLVTKTRDSPCAW 124 Query: 120 QIAISGEKI----SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 + ++ +PVA GT + V DLF+ P+RL+ L+S E I D++ + Sbjct: 125 KCRYDAGRLDARTPEPQPVAGTDGTTLVVEDLFYNFPSRLHSLRSPAEEYAKIVDIVSKY 184 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE----I 231 AI V FT + + +S ER+ + G + +EL + + + Sbjct: 185 AIHATHVGFTCKKYGTAANDIALRSGMSQ-KERVRAIYGSAVASQLLELEVEPHTDYGLL 243 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 G ++ + FINGR V + I Y+ +P G P V L LE+D Sbjct: 244 KCTGLITNVNYDNKKSTPPIFFINGRLVSCDPLRRAIAQTYSTFLPKGHKPFVYLSLELD 303 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 VDVNVHP K +RF I + + Q I + + +S + L+++++ S + Sbjct: 304 SVNVDVNVHPTKREVRFLFEDEIVDHVAQKIAEVLANTDVSR-TFLTQQLLPSPKRSATT 362 Query: 352 --KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 PK L + + E++L D TY V+ + A Sbjct: 363 DIAISTPKKLRPLPSFSQYKRPSEHKLVRTDFSQPTLTTYLSQKTSVDNVDNAASPTQRA 422 Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 ++ + + + + AA +RL E + + S L D+ Sbjct: 423 KVKLKSIFELKEEVE-------QAADDRLT-EVFSKLTFIGVVDSLKRLMCFQHDVKLYI 474 Query: 470 CALIMEHDEDLHRLGI-KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 E +++G+ FG + + + P ++ + L D +DE++ Sbjct: 475 ADYGALCYELFYQIGLADFSNFG--CLRLSQ-PVSIADLLLENGLTDQMDEVLQ 525 >gi|150865217|ref|XP_001384344.2| hypothetical protein PICST_89086 [Scheffersomyces stipitis CBS 6054] gi|149386473|gb|ABN66315.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 736 Score = 303 bits (776), Expect = 5e-80, Method: Composition-based stats. Identities = 124/401 (30%), Positives = 198/401 (49%), Gaps = 31/401 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++LSE +IN+IAAGEII +P A+KE++ENS+DA +S ++ V+ GG QI DNG Sbjct: 1 MPIQRLSESVINRIAAGEIIIQPVNALKEMLENSIDAGASSIDIVVKDGGTKLLQIADNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++P+ +R TSK+S +D +I T+GFRGEAL SI ++ L+++++ + Sbjct: 61 HGIAKEDLPLLCERFATSKLSRFEDLESIQTYGFRGEALASISHIARLSVVTKTATSAVA 120 Query: 119 AQIAISGEKI----------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLI 168 + + K+ + +PVA GT + V DLF+ +P RL LKS+ E + I Sbjct: 121 YKAFYANGKLSGQNFKSSANTEPKPVAGKVGTQITVEDLFYNLPQRLKGLKSKSDEFSRI 180 Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE----- 223 DVI R AI V F+ ++ ++ ERI + G + +E Sbjct: 181 LDVIGRYAIHCKDVGFSCKKHGEPYQILSTRAQLP-IKERIRTIFGNSIATDILEVDLDT 239 Query: 224 --------LNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 N K I++ G +N FIN R V + + + Y Sbjct: 240 NIEKEYGTDNSKYGLISVTGAITNSNYNNKKRIPPVFFINNRLVACEPLKRAVSGVYQFF 299 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS 335 +P G YP + L L+ID + VDVN+HP K +RF + I I+ + ++ S Sbjct: 300 LPKGSYPFIYLSLQIDAQNVDVNIHPTKREVRFLHEEEIIELIVDKVHLILSSVDTSR-- 357 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL 376 K + K + +++ T +Q+K + QEN+L Sbjct: 358 --KFKTQTILSNTGTAKRPIDEFSALSTQSQKK-YRQENKL 395 >gi|254577397|ref|XP_002494685.1| ZYRO0A07282p [Zygosaccharomyces rouxii] gi|238937574|emb|CAR25752.1| ZYRO0A07282p [Zygosaccharomyces rouxii] Length = 739 Score = 303 bits (776), Expect = 6e-80, Method: Composition-based stats. Identities = 116/413 (28%), Positives = 202/413 (48%), Gaps = 13/413 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L E ++N+IAAGEII P A+KE++ENS+DA +S ++ ++ GG QITDNG Sbjct: 4 KIKPLDESVVNKIAAGEIIISPVNALKEMMENSIDAGASSLDILVREGGIKLLQITDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++P+ R TSK++ +D I T+GFRGEAL SI ++ LT+ ++ + Sbjct: 64 GISKEDLPILCHRFTTSKLAKFEDLEKIATYGFRGEALASISHIARLTITTKTGDDRCAW 123 Query: 120 QIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ S K+ +PVA GT++ V +LF+ +P+RL L+S E + I DV+ R A Sbjct: 124 RVSYSDGKMIGEPKPVAGKDGTVILVENLFYNMPSRLRALRSSSEEYSKILDVVGRYACH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN----EKSNEITLQ 234 ++F+ +++ + ++ ERI V G + ++L E+ + Sbjct: 184 SEGIAFSCKKFGDSQFALTVRANLSTV-ERIRCVFGSTVSSKLLDLELGPLEEFGVQKVV 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G + + FIN R V + +R Y+ +P G P + L + I+P Sbjct: 243 GKVSNLDLSFKKSISPVFFINNRLVTCNPLARALRQIYSTYLPKGDKPFMYLSILINPEI 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS-----TSSVLSKKMISSFHQDN 349 +DVN+HP K +RF + I I + + ++K S +S V + + +F Sbjct: 303 LDVNIHPTKREVRFLHEEEIIEAISSKLNEELSKIDTSRTFKTSSIVTPQPLKETFESTK 362 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 PK + K + ++ + N L+ +D + +S Sbjct: 363 GPKGSVSKAPHTPVQNKQSPLGNSIKRYENKLVRTDASQSKITSFMANQSTPP 415 >gi|196002717|ref|XP_002111226.1| hypothetical protein TRIADDRAFT_50100 [Trichoplax adhaerens] gi|190587177|gb|EDV27230.1| hypothetical protein TRIADDRAFT_50100 [Trichoplax adhaerens] Length = 733 Score = 303 bits (775), Expect = 7e-80, Method: Composition-based stats. Identities = 116/387 (29%), Positives = 194/387 (50%), Gaps = 18/387 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+KL EK++N+IAAGE+I+RP+ AIKE+IENSLDA+++ ++ + GG QI DNG Sbjct: 4 KIQKLDEKVVNRIAAGEVIQRPANAIKEMIENSLDAKATLIQVTVKSGGLKLIQIQDNGH 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +R TSK+S +D S++ T+GFRGEAL SI V+H+ +++R + Sbjct: 64 GIKKEDLDIVCERFTTSKLSRFEDLSSMVTYGFRGEALASISHVAHVAIVTRTEDSKCAY 123 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + + K+ +P A N GT + V DLFF P RL LK+ E N IT+V Sbjct: 124 RATYADGKMVPGQPNASADPKPCAGNVGTQINVEDLFFNTPLRLKALKNPNEEFNKITEV 183 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 I R A+ V F + + ++ + + I + G +E++ ++ + Sbjct: 184 ISRYAVHQEGVGFILKKYGDSNATVR--TSGSSRLDNIRTIYGASTARELLEVSLENKKL 241 Query: 231 -ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 I + G ++ +FIN R V+ + I YA +P +P + L L+ Sbjct: 242 GIGMNGLISNANYSAKKCIFL-LFINHRLVECSNLRKAIENVYAAYLPKHTHPFLYLSLQ 300 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST---SSVLSKKMISSFH 346 I PR VDVN+HP K ++F + I + I I+ + S + Sbjct: 301 ISPRNVDVNMHPTKHEVQFLHEDKIIDAIQNVIENKLLGANSSRTFLAQTFLPTTSGPTT 360 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQE 373 + + + +S + +Q+K + + Sbjct: 361 KTKVIQDNAEVPISSGSISQKKAYAHQ 387 >gi|17136968|ref|NP_477022.1| Mlh1 [Drosophila melanogaster] gi|7304079|gb|AAF59117.1| Mlh1 [Drosophila melanogaster] Length = 664 Score = 303 bits (775), Expect = 7e-80, Method: Composition-based stats. Identities = 138/565 (24%), Positives = 240/565 (42%), Gaps = 66/565 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL E ++N+IAAGEII+RP+ A+KEL+ENSLDA+S+ ++ + GG QI DNG G Sbjct: 10 IRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQDNGTG 69 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK++ +D S I TFGFRGEAL SI V+HL++ ++ + G + Sbjct: 70 IRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYK 129 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + K+ +P A N GTI+ + DLF+ +P R L+S E +++V+ R A+ Sbjct: 130 ATYADGKLQGQPKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEEFQRLSEVLARYAVHN 189 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V FT + + + E I + G +E + + + I Sbjct: 190 PRVGFTLRKQGDAQPALRT-PVASSRSENIRIIYGAAISKELLEFSHRDEVYKFEAECLI 248 Query: 240 PTFNRGNANQFY-VFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 N +FIN R V+ + +++ + YA +P G +P V + L + P+ +DVN Sbjct: 249 TQVNYSAKKCQMLLFINQRLVESTALRTSVDSIYATYLPRGHHPFVYMSLTLPPQNLDVN 308 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI----------NKKGISTSSVLSKKMISSFHQD 348 VHP K + F I + I Q ++ + + + + L + ++ Q Sbjct: 309 VHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTFYKQLRLPGAPDLDETQLADKTQR 368 Query: 349 NAPKTHLPKYATSLT------------------NTQEKLFLQENRLSTNDLLPSDDPTYS 390 PK + +T ++QE L E S + S Sbjct: 369 IYPKEMVRTDSTEQKLDKFLAPLVKSDSGVSSSSSQEASRLPEESFRVTAAKKSREVRLS 428 Query: 391 EDNDPVEESEATHYQLGI-------ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 D + E + + + Q L + + + E L +++M Sbjct: 429 SVLDMRKRVERQCSVQLRSTLKNLVYVGCVDERRALFQHETRLYMCNTRSFSEELFYQRM 488 Query: 444 RQDFNSTK--ITSQTLLTPEIIDLLEGECALIMEHDE-------------DLHR------ 482 +F + S L E++ L A ++ L + Sbjct: 489 IYEFQNCSEITISPPLPLKELLILSLESEAAGWTPEDGDKAELADGAADILLKKAPIMRE 548 Query: 483 -LGIKAERFGPNAIAIREIPAILSK 506 G++ G + +P++L + Sbjct: 549 YFGLRISEDG----MLESLPSLLHQ 569 >gi|195474635|ref|XP_002089596.1| GE19183 [Drosophila yakuba] gi|194175697|gb|EDW89308.1| GE19183 [Drosophila yakuba] Length = 664 Score = 303 bits (775), Expect = 7e-80, Method: Composition-based stats. Identities = 140/566 (24%), Positives = 242/566 (42%), Gaps = 68/566 (12%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL E ++N+IAAGEII+RP+ A+KEL+ENSLDA+SS ++ + GG QI DNG G Sbjct: 10 IRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSSHIQVHVKAGGLKLLQIQDNGTG 69 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK++ +D S I TFGFRGEAL SI V+HL++ ++ + G + Sbjct: 70 IRREDLAIVCERFTTSKLTCFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGFK 129 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + K+ +P A N GTI+ + DLF+ +P R L+S E +++V+ R A+ Sbjct: 130 ATYADGKLQGPPKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEELQRLSEVLARYAVHN 189 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV--ELNEKSNEITLQGYT 237 P V FT + + N + E I + G + ++ + + Sbjct: 190 PTVGFTLRKQGDAQPALRT-PVNSSRSENIRIIYGAAISKELLGFSHRDEVFKFDAECLI 248 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +Q +FIN R V+ + + + + YA +P G +P V + L + P+ +DV Sbjct: 249 TQVNYS-AKKSQMLLFINQRLVESPALKTAVDSVYATYLPRGHHPFVYMSLTLPPQNLDV 307 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI----------NKKGISTSSVLSKKMISSFHQ 347 NVHP K + F I + I Q ++ + + + + L + + Q Sbjct: 308 NVHPTKHEVHFLYQEEIVDRIKQQVEAQLLGSNSTRTFYKQLRLPGAPDLDETQSADKTQ 367 Query: 348 DNAPKTHLPKYATSLT------------------NTQEKLFLQENRLSTNDLLPSDDPTY 389 PK + AT ++QE L E S + Sbjct: 368 RIYPKELVRTDATEQKLDKFLAPLVKSDSGASSSSSQEAPRLPEESFRVTAARKSREVRL 427 Query: 390 SEDNDPVEESEATHYQLGI-------ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 S D + E + + + Q L + + A E L +++ Sbjct: 428 SSVLDMRQRVERQCSVQLRSTLKNLVYVGCVDEKRALFQHETHLYLCNTRAFSEELFYQR 487 Query: 443 MRQDFNS-TKITSQTLLTPEIIDL-------------LEGECALIMEHDEDLHR------ 482 M +F + ++IT L + + + + L E L + Sbjct: 488 MIYEFQNCSEITIAPPLPLKDLLMLSLESEAAGWTPEDGNKGELADSAAEILLKKAPIMR 547 Query: 483 --LGIKAERFGPNAIAIREIPAILSK 506 G++ G + +P++L + Sbjct: 548 EYFGLRISEEG----MLESLPSLLHQ 569 >gi|238881740|gb|EEQ45378.1| conserved hypothetical protein [Candida albicans WO-1] Length = 717 Score = 303 bits (775), Expect = 7e-80, Method: Composition-based stats. Identities = 124/422 (29%), Positives = 203/422 (48%), Gaps = 22/422 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I++L E +IN+IAAGEII +P+ A+KE++ENS+DA ++ +E ++ GG QITDNG Sbjct: 7 TIKRLDESVINKIAAGEIIIQPANALKEMLENSIDARATMIEILVKDGGLKLLQITDNGH 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ ++P+ +R TSK+S +D +I T+GFRGEAL SI +S L+++++ P + Sbjct: 67 GISKIDLPLLCERFATSKLSKFEDLESIATYGFRGEALASISHISRLSVITKQPNSKLAY 126 Query: 120 QIAISGEKIS-----------SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLI 168 + ++ +P+A GT + V DLF+ IP+RL LKS+ E I Sbjct: 127 KAYYMNGQLCSSNFKPSNTNVEPKPIAGKDGTQIIVEDLFYNIPSRLRGLKSKSDEFAKI 186 Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE----L 224 D++ R AI V F+ ++N + ERI V G N +E Sbjct: 187 LDIVGRYAIHCDNVGFSCKKYGDPLQQVNTRPQMP-IKERIRVVYGSAIANELLEIDGIS 245 Query: 225 NEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 N++ + + G +N Q +FIN R V + + I ++ +P G + Sbjct: 246 NDELGLVKVSGVMTNANYNNKKKIQPIIFINHRLVTCEPLKRAINAVFSYFLPKGSHSFY 305 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS----TSSVLSKK 340 L LEI P +DVNVHP K +RF N I + I+ I ++ S T SV++K+ Sbjct: 306 YLSLEIKPENLDVNVHPTKREVRFLNEDEIIDTIVSEIHTKLSSVDTSRKFKTQSVITKR 365 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 S + + + + K+ + S P+ + + +E E Sbjct: 366 RNSDEELEEHQLPKTLQPSLKKYRQENKMVRVDASQSKLSSFMQQQPSQNYHDVMRKEFE 425 Query: 401 AT 402 Sbjct: 426 YY 427 >gi|225024309|ref|ZP_03713501.1| hypothetical protein EIKCOROL_01184 [Eikenella corrodens ATCC 23834] gi|224942894|gb|EEG24103.1| hypothetical protein EIKCOROL_01184 [Eikenella corrodens ATCC 23834] Length = 453 Score = 302 bits (774), Expect = 8e-80, Method: Composition-based stats. Identities = 147/455 (32%), Positives = 239/455 (52%), Gaps = 35/455 (7%) Query: 171 VIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE 230 + R+A+A P ++F K QS N ERI+ V+G DF ++ ++ + Sbjct: 1 MFDRLALANPHIAFELVHNGKTTAKYPAQSQN----ERITAVLGADFQAASLPIDSGNGI 56 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 + L G PTF +G ++Q Y F+N R V+DK +L + AY + + P VL LE+ Sbjct: 57 LRLHGLIAKPTFAQGRSSQQYCFVNNRFVRDKVMLHAAKQAYRDVLHQQITPAFVLFLEL 116 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK--MISSFHQD 348 P VDVNVHP K+ IRFR+ + + ++ K + + +S ++ H Sbjct: 117 PPEMVDVNVHPTKTEIRFRDSQAVHRLVFHTLNKTLADTRADQTDSVSNAGSLLQHIHSQ 176 Query: 349 NAPKTHLPKYATSLT------------NTQEKLFLQENRLSTNDLLPSDDPTYSEDND-- 394 P++ +++ S + Q++L LQE+R + + SED + Sbjct: 177 RLPESGQGEFSGSPSARPPVAYSPARAPQQQRLTLQESRAAWQTYAELYKHSGSEDPELA 236 Query: 395 --------------PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 + E+ A + LG A AQ+ YI++Q + L+++D HAA ER+ + Sbjct: 237 ALEQSRFAPGAEAARLPETHAEEHPLGFAIAQLLGIYILAQAENSLLLIDMHAAAERVNY 296 Query: 441 EKMRQDFNSTK-ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIRE 499 EKM+ S + SQ LL P + E A + E+ + L + G+ G + IA+R Sbjct: 297 EKMKAQRQSHGSLHSQQLLIPVSFEAGHEEMAALAEYADLLRQYGLDCSAVGSHTIAVRA 356 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 +P +LSK +IP+L R ++ E + + T+++R IL+TMAC+GS+R+GR++ EMN Sbjct: 357 VPQMLSKADIPELARSMLQEAAHTGSIRTVEERENRILSTMACHGSVRAGRRLTLPEMNA 416 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 LLR+ME P S+QCNHGRPT++KL L+D++ LF R Sbjct: 417 LLRDMENTPRSNQCNHGRPTWVKLTLADLDSLFLR 451 >gi|326473631|gb|EGD97640.1| DNA mismatch repair protein Mlh1 [Trichophyton tonsurans CBS 112818] Length = 813 Score = 302 bits (774), Expect = 9e-80, Method: Composition-based stats. Identities = 114/362 (31%), Positives = 182/362 (50%), Gaps = 14/362 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L +IN+IAAGEII P A+KELIENS+DA S+ VE ++ GG QITDNG Sbjct: 54 KIQALDPDVINKIAAGEIIVAPMHALKELIENSVDAGSTSVEILVREGGLKLLQITDNGH 113 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+ +D S+I T+GFRGEAL SI V+HLT+ ++ ++ Sbjct: 114 GIDHDDLSILCERFTTSKLQAFEDLSSIATYGFRGEALASISHVAHLTVTTKTAGSSCAW 173 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ +P+A GT + V DLF+ +P R +S E + D+ Sbjct: 174 RAHYSDGKLVPAKPGQNASPKPIAGRKGTQITVEDLFYNVPTRRRAFRSASEEYAKVLDI 233 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVELNEKSN 229 + R A+ +F+ ++ S N + +RI Q+ G N ++E++ K Sbjct: 234 VGRYAVHCSGTAFSCKKHGEAGVSLST-SINSSIVDRIRQLHGGAVANELVSLEVDGKRW 292 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 + ++ +FIN R V+ I + Y+ +P G +P V L LE Sbjct: 293 GCHTSAWVTTANYH-AKKTTLLIFINHRAVESTAIKRAVEQTYSTFLPKGGHPFVYLDLE 351 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P+++DVNVHP K + F N I I +I+ + S + + + + Sbjct: 352 IEPQRLDVNVHPTKREVNFLNEDEIIESICSAIRTKLAAVDSSRTFMTQTLLPGIRPPEP 411 Query: 350 AP 351 AP Sbjct: 412 AP 413 >gi|13446680|gb|AAK26449.1|AF285636_1 putative mismatch repair protein MutL [Burkholderia mallei] Length = 526 Score = 302 bits (774), Expect = 9e-80, Method: Composition-based stats. Identities = 112/337 (33%), Positives = 182/337 (54%), Gaps = 11/337 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + Sbjct: 90 IPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDAAHATR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + V P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 150 I---DAQTGVVGPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+ + N R+++++G+ F + L+E++ + + G G+P Sbjct: 207 DVAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLPLDERAGPLAVYGCAGLP 262 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL-LLEIDPRQVDVNV 299 T +RG A+ + I R V+ + R V L++ P VDVNV Sbjct: 263 TASRGRADP-AIIIRQRPVRARQTAHARGARRIRGRDARRPISVERAFLDLPPEAVDVNV 321 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 HP+K +RFR+ I F+ ++Q+A+ + ++ Sbjct: 322 HPSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET 358 >gi|68486675|ref|XP_712766.1| hypothetical protein CaO19.11638 [Candida albicans SC5314] gi|68486982|ref|XP_712616.1| hypothetical protein CaO19.4162 [Candida albicans SC5314] gi|46434019|gb|EAK93441.1| hypothetical protein CaO19.4162 [Candida albicans SC5314] gi|46434178|gb|EAK93595.1| hypothetical protein CaO19.11638 [Candida albicans SC5314] Length = 717 Score = 302 bits (774), Expect = 9e-80, Method: Composition-based stats. Identities = 124/422 (29%), Positives = 203/422 (48%), Gaps = 22/422 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I++L E +IN+IAAGEII +P+ A+KE++ENS+DA ++ +E ++ GG QITDNG Sbjct: 7 TIKRLDESVINKIAAGEIIIQPANALKEMLENSIDARATMIEILVKDGGLKLLQITDNGH 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ ++P+ +R TSK+S +D +I T+GFRGEAL SI +S L+++++ P + Sbjct: 67 GISKIDLPLLCERFATSKLSKFEDLESIATYGFRGEALASISHISRLSVITKQPNSKLAY 126 Query: 120 QIAISGEKIS-----------SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLI 168 + ++ +P+A GT + V DLF+ IP+RL LKS+ E I Sbjct: 127 KAYYMNGQLCSSNFKSSNTNVEPKPIAGKDGTQIIVEDLFYNIPSRLRGLKSKSDEFAKI 186 Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE----L 224 D++ R AI V F+ ++N + ERI V G N +E Sbjct: 187 LDIVGRYAIHCDNVGFSCKKYGDPLQQVNTRPQMP-IKERIRVVYGSAIANELLEIDGIS 245 Query: 225 NEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 N++ + + G +N Q +FIN R V + + I ++ +P G + Sbjct: 246 NDELGLVKVSGVMTNANYNNKKKIQPIIFINHRLVTCEPLKRAINAVFSYFLPKGSHSFY 305 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS----TSSVLSKK 340 L LEI P +DVNVHP K +RF N I + I+ I ++ S T SV++K+ Sbjct: 306 YLSLEIKPENLDVNVHPTKREVRFLNEDEIIDTIVSEIHTKLSSVDTSRKFKTQSVITKR 365 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 S + + + + K+ + S P+ + + +E E Sbjct: 366 RNSDEELEEHQLPKTLQPSLKKYRQENKMVRVDASQSKLSSFMQQQPSQNYHDVMRKEFE 425 Query: 401 AT 402 Sbjct: 426 YY 427 >gi|258567578|ref|XP_002584533.1| hypothetical protein UREG_05222 [Uncinocarpus reesii 1704] gi|237905979|gb|EEP80380.1| hypothetical protein UREG_05222 [Uncinocarpus reesii 1704] Length = 719 Score = 302 bits (774), Expect = 9e-80, Method: Composition-based stats. Identities = 117/444 (26%), Positives = 201/444 (45%), Gaps = 21/444 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L ++N+IAAGEII P A+KELIENS+DA ++ VE ++ GG QITDNG Sbjct: 28 KIQALDPDVVNKIAAGEIIVAPMHALKELIENSVDAGATSVEILVKDGGLKLLQITDNGH 87 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 88 GIDHEDLPILCERFTTSKLKAFEDLSSIATYGFRGEALASISHIAHLTVTTKTSGSSCAW 147 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + K+ +P A GT + V DLF+ +P R +S E I D+ Sbjct: 148 RAHYRDGKLVPAKPGQTPGPKPTAGRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDI 207 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 + R A+ VSF+ + ++ +T + +R+ Q+ G N + + + + Sbjct: 208 VGRYAVHCDGVSFSCKKHGDSGVSVSTLAT-SSANDRVRQIYGSAVANELISFDVEDSTL 266 Query: 231 -ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 G + +FIN R+V+ + + Y+ +P G +P L LE Sbjct: 267 GFRATGLASNAN-HHAKRTTVLLFINHRSVESSAVRKAVEQTYSAFLPKGGHPFAYLDLE 325 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I+P++VDVN+HP K + F N I + + + I+ + +S + Sbjct: 326 IEPQRVDVNIHPTKREVNFLNEDEIIELDPRGLTRIISCGQMQNEKDYVH--VSGQYPQT 383 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG-- 407 +T + + E + + + S ++ + E A+ +G Sbjct: 384 KVRTKKADAQSPAAHHSEPSGREAVNIRLTSVKNLRAEVRSTMHNTLTEISASLTYVGLV 443 Query: 408 ---IACAQIHQNYIISQTTDGLVI 428 A IH + G++ Sbjct: 444 DERRRIAAIHSAVNLYLLDYGMIC 467 >gi|194863555|ref|XP_001970498.1| GG23342 [Drosophila erecta] gi|190662365|gb|EDV59557.1| GG23342 [Drosophila erecta] Length = 664 Score = 302 bits (774), Expect = 1e-79, Method: Composition-based stats. Identities = 140/566 (24%), Positives = 244/566 (43%), Gaps = 68/566 (12%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL E ++N+IAAGEII+RP+ A+KEL+ENSLDA+SS ++ + GG QI DNG G Sbjct: 10 IRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSSHIQVQVKAGGLKLLQIQDNGTG 69 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK++ +D S I TFGFRGEAL SI V+HL++ ++ + G + Sbjct: 70 IRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYK 129 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + K+ +P A N GTI+ + DLF+ +P R L+S E +++V+ R A+ Sbjct: 130 ATYADGKLQGQPKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEEFQRLSEVLARYAVHN 189 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE--KSNEITLQGYT 237 P+V FT + + + E I + G +E + + + + Sbjct: 190 PRVGFTLRKQGDAQPALRT-PVASSRSENIRIIYGAAISKELLEFSHRDEVFKFEAECLI 248 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +Q +FIN R V+ + + + + YA +P G++P V + L + P+ +DV Sbjct: 249 TQVNYS-AKRSQMLLFINQRLVESSALKTAVDSVYATYLPRGQHPFVYMSLTLPPQNLDV 307 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI----------NKKGISTSSVLSKKMISSFHQ 347 NVHP K + F I + I Q ++ + + + +S L + + Q Sbjct: 308 NVHPTKHEVHFLYQEEIVDRIKQQVEAQLLGSNSTRTFYKQLRLPGASDLDETQSADKTQ 367 Query: 348 DNAPKTHLPKYATSLT------------------NTQEKLFLQENRLSTNDLLPSDDPTY 389 PK + AT ++QE L E S + Sbjct: 368 RIYPKELVRTDATEQKLDKFLAPLVKSDSGASSSSSQEARRLPEESFRVTAAKKSREVRL 427 Query: 390 SEDNDPVEESEATHYQLGI-------ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 S D + E + + + Q L + + E L +++ Sbjct: 428 SSVLDMRQRVERQCSVQMRSTLKNMVYVGCVDERRTLFQHETHLYLCNTRTFSEELFYQR 487 Query: 443 MRQDFNS-TKITSQTLLTPEIIDL-------------LEGECALIMEHDEDLHR------ 482 M +F + ++IT L + + + + L E L + Sbjct: 488 MIYEFQNCSEITITPPLPLKELLMLSLESEAAGWTPEDGDKAELADSAAEILLKKAPIMR 547 Query: 483 --LGIKAERFGPNAIAIREIPAILSK 506 G++ G + +P++L + Sbjct: 548 EYFGLRISEEG----MLETLPSLLHQ 569 >gi|299740046|ref|XP_001840436.2| DNA binding protein [Coprinopsis cinerea okayama7#130] gi|298404060|gb|EAU81492.2| DNA binding protein [Coprinopsis cinerea okayama7#130] Length = 778 Score = 302 bits (773), Expect = 1e-79, Method: Composition-based stats. Identities = 119/365 (32%), Positives = 179/365 (49%), Gaps = 34/365 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+KL + +IN+IAAGEII RP+ A+KELIENSLDA S+ ++ + GG QI DNG Sbjct: 10 PIKKLDKTLINRIAAGEIIHRPASALKELIENSLDAGSTSIKVTVKDGGLKLLQIQDNGC 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+S D I T+GFRGEAL SI V+ L+++++ + + Sbjct: 70 GIRKSDLPILAERFTTSKLSSFSDLQKIATYGFRGEALASISHVARLSVVTKTKKESCAW 129 Query: 120 QIAI--------SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + + + P A N GT + V +LF+ P RL+ L++ E I DV Sbjct: 130 KAHYLDGALVSSKPGRPAEPEPCAGNDGTTIIVENLFYNTPTRLSALRNNSEEYARILDV 189 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV--------- 222 + + AI PKVSF S +++ N + P+ I + G + Sbjct: 190 MTKYAIHNPKVSFMCKKSGSGSPELST-PPNSDTPQSIRLLYGHSIAKELLHTEVGSSGG 248 Query: 223 -------------ELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIR 269 +E + + + Y P + N +FIN R V+ + + Sbjct: 249 DDDMDVDEADVRKPKDEIEGDWSAEVYFTNPNYQAKKFNFL-LFINHRMVESPRMKRALE 307 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 AY +P G P V L LEIDP+ VDVNVHP K + F I + I ++QK ++ K Sbjct: 308 AAYHSILPKGASPFVYLSLEIDPKNVDVNVHPTKREVHFLYEEEITDRICSAVQKTLSAK 367 Query: 330 GISTS 334 S S Sbjct: 368 ASSRS 372 >gi|195024672|ref|XP_001985918.1| GH21079 [Drosophila grimshawi] gi|193901918|gb|EDW00785.1| GH21079 [Drosophila grimshawi] Length = 662 Score = 302 bits (773), Expect = 1e-79, Method: Composition-based stats. Identities = 126/489 (25%), Positives = 214/489 (43%), Gaps = 42/489 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+KL + ++N+IAAGEII+RP+ A+KEL+ENSLDA+SS ++ + GG QI DNG G Sbjct: 8 IKKLDQVVVNRIAAGEIIQRPANALKELLENSLDAKSSHIQVNVKSGGLKLLQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+S +D + I TFGFRGEAL SI V+HL++ ++ G + Sbjct: 68 IRKEDLAIVCERFTTSKLSKFEDLTEIATFGFRGEALASISHVAHLSIQTKTASEKCGYK 127 Query: 121 IAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K + + +P A N GTI+ + DLF+T+P R LKS E I+DV+ + A+ Sbjct: 128 ASYSDGKLLDAAKPCAGNQGTIITIEDLFYTMPQRRQALKSPAEEFQKISDVLAKYAVHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V+F + E I + G +E + K + + Sbjct: 188 PQVAFVLRKQGEQPT--LKTQACSSRTENIRAIYGGAVAKELMEFSHKDEMFRFELQCQL 245 Query: 240 PTFNRGNAN-QFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 N +FIN R V+ + + I Y +P G++P V + L + P+ +DVN Sbjct: 246 TQVNYAAKKSTLLLFINHRLVESPALKAAIDGVYTTYLPRGQHPFVYMSLVMPPQNLDVN 305 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI-------------------------------- 326 VHP K + F I I ++ + Sbjct: 306 VHPTKHEVHFLYQDEIIERIKLQVEAKLLGSNATRSFYKQLKLPGSTEVETSTQTLDKTQ 365 Query: 327 --NKKGISTSSVLSK--KMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLL 382 +K+ + T + K K + ++ + T + +E + R S L Sbjct: 366 RCDKEMVRTDATEQKLDKFFRPLEKSDSGLSASSGNETPPASQEESFRVTAARKSKEVRL 425 Query: 383 PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 S + + + + + + + Q L + + A E L +++ Sbjct: 426 TSVLDMQQRVERQCHIELRSILKQLVYVGCVDERHALFQHQTHLYMCNTCALSEELYYQR 485 Query: 443 MRQDFNSTK 451 + +F + Sbjct: 486 LVYEFQNCG 494 >gi|297813357|ref|XP_002874562.1| hypothetical protein ARALYDRAFT_911184 [Arabidopsis lyrata subsp. lyrata] gi|297320399|gb|EFH50821.1| hypothetical protein ARALYDRAFT_911184 [Arabidopsis lyrata subsp. lyrata] Length = 727 Score = 302 bits (773), Expect = 1e-79, Method: Composition-based stats. Identities = 122/556 (21%), Positives = 230/556 (41%), Gaps = 41/556 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L E ++N+IAAGE+I+RP A+KEL+ENSLDA+SS + V+ GG Q++D+G Sbjct: 18 KIQRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADSSSISVVVKDGGLKLIQVSDDGH 77 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +RH TSK++ +D ++ + GFRGEAL S+ V+H+T+ + G Sbjct: 78 GIRREDLPILCERHTTSKLTKYEDLFSLSSMGFRGEALASMTYVAHVTVTTITKGQIHGY 137 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + + A GT + V +LF+ + AR L++ + I D++ RMAI Sbjct: 138 RVSYRDGVMEHEPKACAAVKGTQIMVENLFYNMTARRKTLQNSADDYGKIVDLLSRMAIH 197 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV-----ELNEKSNEITL 233 + VSF+ + + ++ + + I V G N + + + Sbjct: 198 HNNVSFSCRKHGAVKADVHSVMSPSRL-DSIRSVYGVSVAKNLMKVEVSSCDPSGCTFDM 256 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 +G+ + +FIN R V+ + I YA T+P P V + + + Sbjct: 257 EGFISNSNY-VSKKTILVLFINDRLVECSALKRAIEIVYAATLPKASKPFVYMSINLPRE 315 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 VD+N+HP K + N II I ++ + + + ++ + Sbjct: 316 HVDINIHPTKKEVSLLNQEIIIEMIQSEVEVKLR--NANDTRTFQEQKVEYIQSTLTS-- 371 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 S + K Q+ + + + D + H + Sbjct: 372 -----PRSDSTVSPKPSGQKAQKVPVNKMVRTDSSDPAGRLHAFLQPKPHNLPDKVSSLS 426 Query: 414 HQNYIISQTTDGLVIVDQHAAHERL----------IFEKMRQDFN---STKITSQTLLTP 460 + Q + D + E + + E +R + + + Sbjct: 427 VVRSSVRQRRNPKETADLSSVQELIAGVDSCCHPGLLETVRNCTYVGMADDVFALVQYNT 486 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 + + + + + L R F NAI + PA LS+ + L + +D Sbjct: 487 HLYLANVVNLSKELMYQQTLRR----FAHF--NAIQL-SDPAPLSELILLALKEEDLD-- 537 Query: 521 IDSSTTYTLQDRIENI 536 ++ L++RI + Sbjct: 538 PETDKNDDLKERIAEM 553 >gi|195123472|ref|XP_002006230.1| GI18680 [Drosophila mojavensis] gi|193911298|gb|EDW10165.1| GI18680 [Drosophila mojavensis] Length = 659 Score = 302 bits (773), Expect = 1e-79, Method: Composition-based stats. Identities = 147/604 (24%), Positives = 249/604 (41%), Gaps = 71/604 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+KL E +IN+IAAGEII+RP+ A+KEL+ENSLDA+SS ++ + GG QI DNG G Sbjct: 7 IKKLDEVVINRIAAGEIIQRPANALKELLENSLDAKSSHIQVNVKSGGLKLLQIQDNGTG 66 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+S +D + I TFGFRGEAL SI V+HLT+ ++ G + Sbjct: 67 IRKEDLSIVCERFTTSKLSKFEDLTEIATFGFRGEALASISHVAHLTIQTKTASERCGYK 126 Query: 121 IAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + K ++ +P A N GTI+ + DLF+T+P R LKS E I+DV+ + A+ Sbjct: 127 ATYADGKLLAPPKPCAGNQGTIITIEDLFYTMPQRRQALKSPAEEFQKISDVLAKYAVHN 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V F + E I + G +E + K + + Sbjct: 187 PQVGFVLRKQGEQPS--LKTQACSSRTENIRAIYGAAVAKELMEFSHKDEMFKFELECQL 244 Query: 240 PTFNRGNAN-QFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 N +FIN R V+ + + + T YA +P G++P V + L + P+ +DVN Sbjct: 245 TQVNYSAKKSTLLLFINHRLVESSALKTALDTVYATYLPRGQHPFVYMSLMLPPQNLDVN 304 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI-------------------------------- 326 VHP K + F I I Q ++ + Sbjct: 305 VHPTKHEVHFLYQDEIIERIKQQVEAKLLGSNATRSFYKQLKLPGTVDLEANQTLDKTQR 364 Query: 327 -NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLF-LQENRLSTNDLLPS 384 +K + + +K+ F + L + + T +QE+ F + R S L S Sbjct: 365 IYEKDMVRTDATEQKLEKFFKALEKTDSGLSSSSGNETLSQEESFRVTAARKSKEVRLTS 424 Query: 385 DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 + S + ++ + + + + + Q L + D A E L ++++ Sbjct: 425 VLNMQQSVERQCQVSLRSIFKQLVYVGCVDERHALFQHETRLYMCDTFALSEELYYQRLI 484 Query: 445 QDFNSTKITSQTLLT---------------------PEIIDLLEGECALIMEHDEDLHR- 482 +F + + +L + A++ E + Sbjct: 485 YEFQNCPEVRVVPPLSLQQLLLIALDSRAAGWVPEDGDKTELADNAVAILQEMAPLMREY 544 Query: 483 LGIKAERFGPNAIAIREIPAILSK-----KNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 ++ G + +PA+L + +P L + E+ S T + Sbjct: 545 FSLRISEQG----CLESLPALLPQHVPSRAQLPVYLLRLATEVEWSEETQCFETFCRETA 600 Query: 538 ATMA 541 A Sbjct: 601 RYYA 604 >gi|254421106|ref|ZP_05034830.1| MutL C terminal dimerisation domain family [Brevundimonas sp. BAL3] gi|196187283|gb|EDX82259.1| MutL C terminal dimerisation domain family [Brevundimonas sp. BAL3] Length = 389 Score = 301 bits (772), Expect = 1e-79, Method: Composition-based stats. Identities = 152/389 (39%), Positives = 227/389 (58%), Gaps = 26/389 (6%) Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 + L GY G+PT++RGNA Y+F+NGR V+D+ + +R AYA+ + R+P VL L+I Sbjct: 1 MRLSGYAGLPTYSRGNAAHQYLFVNGRPVKDRLLQGALRGAYADFLARDRHPAAVLFLDI 60 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 DP VDVNVHPAK+ +RFR+P ++R I+ +++ A++ G S+ ++ ++ F Sbjct: 61 DPLYVDVNVHPAKAEVRFRDPALVRGLIVGALRHALHAAGHRASTTVAADAMAGFQPHTG 120 Query: 351 PKTHLPKYATSLTNTQ----------------------EKLFLQENR---LSTNDLLPSD 385 T P Y+ S + Q E+ E R S Sbjct: 121 VSTG-PAYSPSSPSAQGFSGWTSWSQPAAAAQVLPGLNERSARVEPRWDGPSWPSHPAQA 179 Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 + + + + Y LG A Q+H NYI++QT DGLVIVDQHAAHERL++E+M+ Sbjct: 180 NDLATGHSPLATPLDPLDYPLGAARGQLHANYIVAQTRDGLVIVDQHAAHERLVYERMKA 239 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS 505 +T Q LLTPE++DL E + E+L +G+ E FG A+ +RE PA+L Sbjct: 240 QMAEGSVTRQALLTPEVVDLDPAEAERVASRAEELAEMGLIVEAFGAGAVLVRETPAMLG 299 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 ++ L+RDI D++ + +L++R+ + TMAC+GS+RSGR + + EMN LLR+ME Sbjct: 300 DTDVQGLIRDIADDLAEHGAALSLKERMAEVCGTMACHGSVRSGRILSAPEMNALLRQME 359 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 P+S QCNHGRPT+++LKL D+EKLFGR Sbjct: 360 ATPHSGQCNHGRPTYVELKLHDLEKLFGR 388 >gi|108803144|ref|YP_643081.1| DNA mismatch repair protein MutL [Rubrobacter xylanophilus DSM 9941] gi|108764387|gb|ABG03269.1| DNA mismatch repair protein MutL [Rubrobacter xylanophilus DSM 9941] Length = 532 Score = 301 bits (772), Expect = 2e-79, Method: Composition-based stats. Identities = 114/328 (34%), Positives = 178/328 (54%), Gaps = 9/328 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++R L + +IAAGE+IERP+ A+KEL+EN+LDA ++RVE + GGG S ++ D+G Sbjct: 20 RVRILPPDVARRIAAGEVIERPASAVKELVENALDAGATRVEVEVEGGGTSLIRVRDDGA 79 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + A+ RH TSK+ DD + + T GFRGEAL +IGAVS L+L +R G Sbjct: 80 GMLPGDAERALGRHATSKLRCVDDLARVSTLGFRGEALHAIGAVSSLSLTTRAAGEALGR 139 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + + + P A PGT VEVRDLF +P R FL + + E N + + +A++ Sbjct: 140 RVRVLAGEPAGSEPAAHPPGTTVEVRDLFLNLPVRRGFLGTARAEGNAVARAVEALALSR 199 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V F + + ER++QV G + L++ ++G Sbjct: 200 PEVGFFLRAEGRPALSLPPAAG---LRERVAQVHGLALAETLLPLSDP----AVRGLVSP 252 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + + +V +NGR V + AYA+ +P GR+P L LE+DP +VDVNV Sbjct: 253 LSASFPTRRYLHVTVNGRVVDPDSFAPAVAKAYADLLPKGRHPAAFLRLELDPEEVDVNV 312 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 HPAK +R R + ++ +++ A+ Sbjct: 313 HPAKRAVRLRGGRSVYPLVVGAVRSALE 340 Score = 127 bits (318), Expect = 6e-27, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 77/185 (41%), Gaps = 14/185 (7%) Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q I++Q + L+++DQH AHER+++E++ + + E Sbjct: 361 IGQFAGRCIVAQRGEELLLIDQHGAHERVLYERLLYGPPERPVALDP--PRVVRLPGELG 418 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 ++ +E+L G + E FG +A+ + P ++ L + Sbjct: 419 REVLWSFEEELASAGFRVEPFGEDAVRVLAAPR--GVGDVAAGLVGAAQALAGG------ 470 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 E+ L +AC G+ R G ++ M RLL + C HGRP ++ L ++ Sbjct: 471 ----EDYLKALACRGADRFGEELDRARMARLLEDWASTRFPEVCPHGRPIVRRISLGELL 526 Query: 590 KLFGR 594 + FGR Sbjct: 527 RGFGR 531 >gi|169611282|ref|XP_001799059.1| hypothetical protein SNOG_08751 [Phaeosphaeria nodorum SN15] gi|111062799|gb|EAT83919.1| hypothetical protein SNOG_08751 [Phaeosphaeria nodorum SN15] Length = 751 Score = 301 bits (771), Expect = 2e-79, Method: Composition-based stats. Identities = 120/413 (29%), Positives = 197/413 (47%), Gaps = 30/413 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L++ ++N+IAAGEII P A+KELIEN++DA S+ +E V+ GG QITDNG Sbjct: 31 RIKALAQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTALEVVVKDGGLKLLQITDNGH 90 Query: 62 GMT----------------SEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAV 103 G+ E++P+ +R TSK+ +D ++I T+GFRGEAL SI + Sbjct: 91 GIDVSITIKCSSQPADKAQKEDLPILCERFTTSKLKAFEDLTSIGTYGFRGEALASISHI 150 Query: 104 SHLTLMSRPPQNNTGAQIAISGEKISSVRPVA--------MNPGTIVEVRDLFFTIPARL 155 +HL + +R +++ + +G K++S +P GT + V DLF+ +P+R Sbjct: 151 AHLRVTTRTKESSCAWEAHYAGGKLASPKPGQTAEPKPKAGRQGTQITVEDLFYNVPSRR 210 Query: 156 NFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGE 215 +S E I +++ + A+ VSF+ N + +RI Q+ G Sbjct: 211 RAFRSASEEYAKILELVGKYAVHCLGVSFSCKKAGDNSGSSVSVPASATVKDRIRQIHGG 270 Query: 216 DFINNAVELNEK--SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 N VEL + +G+ ++ +FIN R V I ++ YA Sbjct: 271 AVANELVELKSEDDRWGFKCEGWISSANYS-AKRTSMLLFINHRAVDSAIIKKSVEQTYA 329 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 +P G +P L LEI+P +VDVNVHP K + F N I I I+ +++K S Sbjct: 330 AFLPKGNHPFFYLSLEIEPARVDVNVHPTKREVHFLNEDEIVAMICDEIRSSLSKVDTSR 389 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDD 386 S +++ ++S+ A AT+ T + +R ++ Sbjct: 390 S-FMTQSLLSNPKVPFATPMKQIPLATTTPATDDVSDRSASRAPKTATRRENN 441 >gi|195581491|ref|XP_002080567.1| GD10548 [Drosophila simulans] gi|194192576|gb|EDX06152.1| GD10548 [Drosophila simulans] Length = 664 Score = 301 bits (770), Expect = 3e-79, Method: Composition-based stats. Identities = 136/566 (24%), Positives = 239/566 (42%), Gaps = 68/566 (12%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL E ++N+IAAGEII+RP+ A+KEL+ENSLDA+SS ++ + GG QI DNG G Sbjct: 10 IRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSSHIQVQVKAGGLKLLQIQDNGTG 69 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK++ +D S+I TFGFRGEAL SI V+HL++ ++ + G + Sbjct: 70 IRREDLAIVCERFTTSKLTRFEDLSHIATFGFRGEALASISHVAHLSIQTKTAKEKCGYK 129 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + K+ +P A N GTI+ + DLF+ +P R L+S E +++V+ R A+ Sbjct: 130 ATYADGKLQGQPKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEEFQRLSEVLARYAVHN 189 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE--KSNEITLQGYT 237 P+V FT + + + E I + G +E + + + + Sbjct: 190 PRVGFTLRKQGEAQPALRT-PVASSRSENIRIIYGAAISKELLEFSHRDEVFKFEAECLI 248 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ Q +FIN R V+ + +++ + YA +P G +P V + L + P+ +DV Sbjct: 249 SQVNYS-AKKCQMLLFINQRLVESTALRTSVDSVYATYLPRGHHPFVYMSLTLPPQNLDV 307 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAI----------NKKGISTSSVLSKKMISSFHQ 347 NVHP K + F I + I Q ++ + + + + L + + Q Sbjct: 308 NVHPTKHEVHFLYQEEIADSIKQQVEARLLGSNATRTFYKQLRLPGAPDLDETQSADKTQ 367 Query: 348 DNAPKTHLPKYATSLT------------------NTQEKLFLQENRLSTNDLLPSDDPTY 389 PK + + ++QE L E S + Sbjct: 368 RIYPKELVRTDSNEQKLDKFLAPLVKSDSGMSSSSSQEATRLPEESFRITAAKKSREVRL 427 Query: 390 SEDNDPVEESEATHYQLGI-------ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 S D + E + + + Q L + + + E L +++ Sbjct: 428 SSVLDMRKRVERQCSVQLRSTLKNLVYVGCVDERRALFQHETRLYMCNTRSFSEELFYQR 487 Query: 443 MRQDFNSTKITSQTLLTPEIIDL--------------LEGECALIMEHDEDLHR------ 482 M +F + + T P L + L + L + Sbjct: 488 MIYEFQNCSEITITPPLPLKALLVLSLESEAAGWTSEDGDKAELADSAADILLKKAPIMK 547 Query: 483 --LGIKAERFGPNAIAIREIPAILSK 506 G++ G + +P++L + Sbjct: 548 EYFGLRISEDG----MLESLPSLLHQ 569 >gi|302496819|ref|XP_003010410.1| DNA mismatch repair protein, putative [Arthroderma benhamiae CBS 112371] gi|291173953|gb|EFE29770.1| DNA mismatch repair protein, putative [Arthroderma benhamiae CBS 112371] Length = 840 Score = 300 bits (769), Expect = 3e-79, Method: Composition-based stats. Identities = 113/369 (30%), Positives = 183/369 (49%), Gaps = 16/369 (4%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L +IN+IAAGEII P A+KELIENS+DA S+ VE ++ GG QITDNG G+ Sbjct: 84 KALDPDVINKIAAGEIIVAPMHALKELIENSVDAGSTSVEILVREGGLKLLQITDNGHGI 143 Query: 64 TSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 +++ + +R TSK+ +D S+I T+GFRGEAL SI V+HLT+ ++ ++ + Sbjct: 144 DHDDLSILCERFTTSKLQAFEDLSSIATYGFRGEALASISHVAHLTVTTKTAGSSCAWRA 203 Query: 122 AISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR 173 S K+ +P+A GT + V DLF+ +P R +S E I D++ Sbjct: 204 HYSDGKLVPAKPGQNASPKPIAGRKGTQITVEDLFYNVPTRRRAFRSASEEYAKILDIVG 263 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVELNEKSNEI 231 R A+ +F+ ++ S N + +RI Q+ G N ++E++ K Sbjct: 264 RYAVHCSGTAFSCKKHGEAGVSLST-SINSSILDRIRQLHGGAVANELVSLEVDGKRWGC 322 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 + ++ +FIN R V+ I + Y+ +P G +P V L LEI+ Sbjct: 323 RASAWVTNANYH-AKKTTLLIFINHRAVESTAIKRAVEQTYSTFLPKGGHPFVYLDLEIE 381 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 P+++DVNVHP K + F N I I +I+ + + +S + + + P Sbjct: 382 PQRLDVNVHPTKREVNFLNEDEIIESICSAIRTKLA--AVDSSRTFMTQTLLPGIRPPEP 439 Query: 352 KTHLPKYAT 360 T ++ Sbjct: 440 ATLAGDASS 448 >gi|332021655|gb|EGI62014.1| DNA mismatch repair protein Mlh1 [Acromyrmex echinatior] Length = 862 Score = 300 bits (769), Expect = 3e-79, Method: Composition-based stats. Identities = 112/399 (28%), Positives = 190/399 (47%), Gaps = 7/399 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIRKL E ++N+IAAGEII+RP+ A+KELIENSLDA+++ ++ GG QI DNG Sbjct: 6 KIRKLDEVVVNRIAAGEIIQRPANALKELIENSLDAKATNIQITAKEGGLKLLQIQDNGT 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +R TSK+ +D + TFGFRGEAL SI ++ LT+ ++ Sbjct: 66 GIRKEDMEIVCERFTTSKLQKFEDLGALTTFGFRGEALASISHIALLTITTKTADEKCAY 125 Query: 120 QIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + K+ P A N GT++ + +LF+ + R L + E IT+V+ R A+ Sbjct: 126 KASYINSKLKAPPVPCAGNQGTVITIENLFYNVATRRKALSNPSEEFTKITEVVMRYAVH 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVELNEKSNEITLQGY 236 + FT ++ N I + G VEL++K + + G Sbjct: 186 NSAIGFTLKKHGEPSSQVRT-PYNSTKQNNIRILYGNPVARELLEVELDDKDYKFKMHGL 244 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P + +FIN R V I + Y+ +P +P + L+I+P+ +D Sbjct: 245 VTNPNYT-NKRMVMLLFINNRLVDSASIRKMLEDVYSVYLPKKAHPWCYISLDINPQNID 303 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHP K +RF + I I ++ + + S + L ++ + + LP Sbjct: 304 VNVHPTKHEVRFLHEDAIIERIKFALDERLTGNSASRTFYLQARLPKADITKEVLEEVLP 363 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 +Y ++ +K+ +E + + D ++ + Sbjct: 364 EYNKGNSDKLKKIHAREMIRTDSSDQKLDKFNFTIHFEQ 402 >gi|195332392|ref|XP_002032882.1| GM21014 [Drosophila sechellia] gi|194124852|gb|EDW46895.1| GM21014 [Drosophila sechellia] Length = 664 Score = 300 bits (769), Expect = 4e-79, Method: Composition-based stats. Identities = 138/565 (24%), Positives = 241/565 (42%), Gaps = 66/565 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL E ++N+IAAGEII+RP+ A+KEL+ENSLDA+SS ++ + GG QI DNG G Sbjct: 10 IRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSSHIQVQVKAGGLKLLQIQDNGTG 69 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK++ +D S I TFGFRGEAL SI V+HL++ ++ + G + Sbjct: 70 IRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYK 129 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + K+ +P A N GTI+ + DLF+ +P R L+S E +++V+ R A+ Sbjct: 130 ATYADGKLQGQPKPCAGNQGTIICIEDLFYNMPQRRQALRSPGEEFQRLSEVLARYAVHN 189 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V FT + + + E I + G +E + + + I Sbjct: 190 PRVGFTLRKQGDAQPALRT-PVASSRSENIRIIYGAAISKELLEFSHRDEVFKFEAECLI 248 Query: 240 PTFNRGNANQFY-VFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 N +FIN R V+ + +++ + YA +P G +P V + L + P+ +DVN Sbjct: 249 TQVNYSAKKCQMLLFINQRLVESTALRTSVDSVYATYLPRGHHPFVYMSLTLPPQNLDVN 308 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI----------NKKGISTSSVLSKKMISSFHQD 348 VHP K + F I + I Q ++ + + + + L + + Q Sbjct: 309 VHPTKHEVHFLYQEEIADSIKQQVEARLLGSNATRTFYKQLRLPGAPDLDETQSADKTQR 368 Query: 349 NAPKTHLPKYATSLT------------------NTQEKLFLQENRLSTNDLLPSDDPTYS 390 PK + +T ++QE L E S + S Sbjct: 369 IYPKELVRTDSTEQKLDKFLAPLVKSDSGMSSSSSQEATRLPEESFRVTAAKKSREVRLS 428 Query: 391 EDNDPVEESEATHYQLGI-------ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 D + E + + + Q L + + + E L +++M Sbjct: 429 SVLDMRKRVERQCSVQLRSTLKNLVYVGCVDERRALFQHETRLYMCNTRSFSEELFYQRM 488 Query: 444 RQDFNS-TKITSQTLLTPEIIDL-------------LEGECALIMEHDEDLHR------- 482 +F + ++IT L + + + + L + L + Sbjct: 489 IYEFQNCSEITITPPLPLKELLVLSLESEAAGWTPEDGDKAELADSAADILLKKAPIMKE 548 Query: 483 -LGIKAERFGPNAIAIREIPAILSK 506 G++ G + +P++L + Sbjct: 549 YFGLRISEDG----MLESLPSLLHQ 569 >gi|71022249|ref|XP_761355.1| hypothetical protein UM05208.1 [Ustilago maydis 521] gi|46097663|gb|EAK82896.1| hypothetical protein UM05208.1 [Ustilago maydis 521] Length = 831 Score = 300 bits (769), Expect = 4e-79, Method: Composition-based stats. Identities = 121/390 (31%), Positives = 187/390 (47%), Gaps = 18/390 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I++L E ++N+IAAGEII RP+ A+KELIENSLDA ++ + + GG QI DNG Sbjct: 21 PIKRLDESVVNRIAAGEIIHRPANALKELIENSLDAGATLIRITLKEGGIKMLQIQDNGS 80 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTG 118 G+ ++P+ +R TSK+ D D N+ TFGFRGEAL SI V + + ++S+ + Sbjct: 81 GIQPGDLPLLCERFATSKLRDFGDLDNMATFGFRGEALASISYVTASMNVVSKTKHQHCA 140 Query: 119 AQIAISGEKISSVRP--------VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITD 170 + + +++ +P A GT++ DLF+ +P R L+S E N D Sbjct: 141 YRAYYANGRLAPPKPGQSADPKQCAGTDGTLITAEDLFYNVPQRRRALRSAADEYNRALD 200 Query: 171 VIRRMAIAY--PKVSFTFSTIKSNRYKMN-FQSTNGNFPERISQVIGEDFINNAVELN-- 225 V+ + A+ Y V F +N +N S + + I + G VELN Sbjct: 201 VVSKYAVHYGGRGVGFVCRKASTNSTDLNTPSSPTNSTLDTIRILHGNAVARELVELNDV 260 Query: 226 -EKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 + G+ ++ FIN R V+ + +I YA +P G +P V Sbjct: 261 SDDQLGFQCHGWISGANWS-SKRTTLLCFINNRLVECPLLKRSIEALYATLLPKGGHPWV 319 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 L + I+P VDVNVHP K + F + I I Q+ QK + S + S+ ++ Sbjct: 320 YLSITINPANVDVNVHPTKKEVHFLHQDEIVELICQAAQKRLAGANSSRTFAFSQAVLPV 379 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQEN 374 D T A+ +T+ EK LQ+ Sbjct: 380 LAPDVGIMTSSAALASRVTDQAEKPPLQQA 409 >gi|218189774|gb|EEC72201.1| hypothetical protein OsI_05282 [Oryza sativa Indica Group] Length = 1224 Score = 300 bits (768), Expect = 4e-79, Method: Composition-based stats. Identities = 108/380 (28%), Positives = 184/380 (48%), Gaps = 10/380 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L E ++N+IAAGE+I+RPS A+KELIENSLDA +S V + GG Q++D+G Sbjct: 17 RIRRLEESVVNRIAAGEVIQRPSSAVKELIENSLDAGASSVSVAVKDGGLKLIQVSDDGH 76 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +RH TSK+S +D I + GFRGEAL S+ V H+T+ + G Sbjct: 77 GIRFEDLAILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEGQLHGY 136 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + + +P A GT V V +LF+ + AR L++ + I D I R A+ Sbjct: 137 RVSYRDGVMENEPKPCAAVKGTQVMVENLFYNMVARKKTLQNSNDDYPKIVDFISRFAVH 196 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE-----ITL 233 + V+F+ +NR ++ ST+ + I V G + + +E+ + + Sbjct: 197 HINVTFSCRKHGANRADVHSASTSSRL-DAIRSVYGASVVRDLIEIKVSYEDAADSIFKM 255 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 GY + +FIN R V + I Y+ T+P P + + + + Sbjct: 256 DGYISNANYVAKKITMI-LFINDRLVDCTALKRAIEFVYSATLPQASKPFIYMSIHLPSE 314 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 VDVN+HP K + N I I +I++ + + +S Q N K Sbjct: 315 HVDVNIHPTKKEVSLLNQERIIETIRNAIEEKLMNSNTTRIFQTQALNLSGIAQANPQKD 374 Query: 354 HLPKYATSLTNTQEKLFLQE 373 + + + +K+ + + Sbjct: 375 KVSEASMGSGTKSQKIPVSQ 394 >gi|328697305|ref|XP_001945011.2| PREDICTED: DNA mismatch repair protein Mlh1-like [Acyrthosiphon pisum] Length = 677 Score = 300 bits (767), Expect = 6e-79, Method: Composition-based stats. Identities = 110/337 (32%), Positives = 176/337 (52%), Gaps = 8/337 (2%) Query: 2 KI-RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 I RKL+E ++N+IAAGE+I+RP+ A+KEL+ENSLDA+S+ ++ + GG QI DNG Sbjct: 6 PIVRKLAEDVVNRIAAGEVIQRPANALKELLENSLDAKSTNIQVTLKNGGLKLLQIQDNG 65 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E++ + +R TSK+ +D + I T+GFRGEAL SI V+HLT+ ++ Sbjct: 66 TGIRTEDLGIVCERFTTSKLQQFEDLTKISTYGFRGEALASISHVAHLTITTKTNGALCA 125 Query: 119 AQI-AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + G+ + + A N GTI+ V DLF I R +KS E + +V+ R AI Sbjct: 126 YKGLYKDGKLKAPPKSCAGNVGTIITVEDLFHNIATRKKSMKSFNEEHLKVVEVVSRYAI 185 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI--TLQG 235 P V FT ++ + I + G +E+N+ N + ++G Sbjct: 186 HNPLVGFTVKKQGELLTEVKTNQG-STHIDNIQAIYGSAISRALLEVNDNCNILKVKIKG 244 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y P F+ +FIN R V + + + Y+ + G +P + L L +DP V Sbjct: 245 YVSNPNFSAKKQIFI-LFINDRLVDSQGLRKAVDQVYSIYLAKGSHPFIYLSLNLDPMNV 303 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 DVNVHP K + F + + + ++ +IQ ++ S Sbjct: 304 DVNVHPTKHEVHFLHEDKVIDKVVDAIQDKLSGTNTS 340 >gi|242055637|ref|XP_002456964.1| hypothetical protein SORBIDRAFT_03g046470 [Sorghum bicolor] gi|241928939|gb|EES02084.1| hypothetical protein SORBIDRAFT_03g046470 [Sorghum bicolor] Length = 721 Score = 300 bits (767), Expect = 6e-79, Method: Composition-based stats. Identities = 103/337 (30%), Positives = 169/337 (50%), Gaps = 10/337 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L E ++N+IAAGE+I+RPS A+KEL+ENSLDA +S V + GG Q++D+G Sbjct: 16 RIRRLEESVVNRIAAGEVIQRPSSAVKELVENSLDAGASTVSVTVKDGGLKLIQVSDDGH 75 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +RH TSK+S +D I + GFRGEAL S+ V H+T+ + G Sbjct: 76 GIRFEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEGQLHGY 135 Query: 120 Q-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + G + +P A GT V V +LF+ + AR L++ + + D I R A+ Sbjct: 136 RVCYKDGVMENEPKPCAAVKGTQVMVENLFYNMVARRKTLQNSNDDYPKVVDFISRFAVH 195 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE-----ITL 233 + V+F+ +NR ++ ST+ + I V G + + +E+ + + Sbjct: 196 HINVNFSCRKHGANRADVHSSSTSSRL-DAIRNVYGASVVRDLIEIEVSDEDAGDAVFKM 254 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 GY + +FIN R V + I Y+ T+P P + + + + Sbjct: 255 DGYISNANYVAKKITMI-LFINDRLVDCTSLKRAIEFVYSATLPQASKPFIYMSINLPSE 313 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 VDVN+HP K + N I I +I++ + Sbjct: 314 HVDVNIHPTKKEVSLLNQERIIETIKNTIEEKLRNSN 350 >gi|224146324|ref|XP_002325965.1| predicted protein [Populus trichocarpa] gi|222862840|gb|EEF00347.1| predicted protein [Populus trichocarpa] Length = 747 Score = 299 bits (766), Expect = 7e-79, Method: Composition-based stats. Identities = 109/382 (28%), Positives = 186/382 (48%), Gaps = 17/382 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E ++N+IAAGE+I+RP AIKEL+ENSLDA S+ + V+ GG Q++D+G Sbjct: 33 KIHRLDESVVNRIAAGEVIQRPVSAIKELVENSLDAHSTSINVVVKDGGLKLIQVSDDGH 92 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +RH TSK++ +D +I + GFRGEAL S+ V H+T+ + P G+ Sbjct: 93 GIRREDLPILCERHTTSKLTNYEDLQSIKSMGFRGEALASMTYVGHVTVTTITPGKLHGS 152 Query: 120 -QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 G +P A GT + V +LF+ + AR ++ + + I D++ R AI Sbjct: 153 GVSYRDGVMEDEPKPCAAVKGTQIMVENLFYNMIARRKTFQNSSDDYSKIVDLLSRFAIH 212 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV-----ELNEKSNEITL 233 + VSF+ ++R ++ +T+ + I V G N + + + S+ + Sbjct: 213 HINVSFSCRKHGASRADVHSVTTSSRL-DSIRSVYGVSVALNLMKIEVPDSDPSSSVFNM 271 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G + +FIN R V+ + I YA T+P P + + + + P Sbjct: 272 DGLISNSNY-VAKKTTMVLFINDRLVECTALKRAIEIVYAATLPKASKPFIYMSIVLPPE 330 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 VDVNVHP K + N I N I +++ + + ++ + D++P Sbjct: 331 HVDVNVHPTKREVSLLNQEFIINTIQSAVESKLRNSNE--ARTFQEQTL-----DSSPSV 383 Query: 354 HLPKYATSLTNTQEKLFLQENR 375 L S N + +++ Sbjct: 384 TLSAKKDSNVNPSPSPYGSKSQ 405 >gi|301120306|ref|XP_002907880.1| DNA mismatch repair protein, putative [Phytophthora infestans T30-4] gi|262102911|gb|EEY60963.1| DNA mismatch repair protein, putative [Phytophthora infestans T30-4] Length = 776 Score = 299 bits (765), Expect = 9e-79, Method: Composition-based stats. Identities = 102/354 (28%), Positives = 175/354 (49%), Gaps = 23/354 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++LS ++N+IAAGE++ RP+ A+KEL+ENSLDA ++ V ++ GG QI DNG Sbjct: 6 RIQRLSPDVVNRIAAGEVVHRPANAVKELLENSLDAGATNVAVAVSQGGLKLLQIQDNGR 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+ +D +I +FGFRGEAL SI V+H+++ SR Sbjct: 66 GIQRQDLEIVCERFTTSKLKSFEDLKDIKSFGFRGEALASISHVAHVSITSRTADQPCAY 125 Query: 120 QIAISGEKI--------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + + K+ + +P A GT + V DLF+ + R LK+ + I DV Sbjct: 126 KASYRDGKLVSKRPGESNDPKPCAGKNGTQIVVEDLFYNLSTRKQALKNTSEQYTRILDV 185 Query: 172 IRRMAIAY--PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE--- 226 +++ AI + V F + + +N ++ + I + G + Sbjct: 186 VQKYAIHFGAKGVGFVCKKHRESSCGVNTTQSSSQL-DAIRTIYGSKLASELNPFEHVRD 244 Query: 227 ------KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 + ++GY ++ +N +FIN R V+ + Y+ +P Sbjct: 245 ATAAGSMDLQRQVRGYISNANYHLKKSNFI-LFINDRLVECPSLKRACEYVYSLYLPKNT 303 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 +P + L +E+ PR +DVNVHP K + F + I + I Q+I+K + S S Sbjct: 304 HPFIYLSMELPPRNIDVNVHPTKREVHFLHEEDIVDSISQAIEKQLKGSNESRS 357 >gi|302678109|ref|XP_003028737.1| hypothetical protein SCHCODRAFT_59880 [Schizophyllum commune H4-8] gi|300102426|gb|EFI93834.1| hypothetical protein SCHCODRAFT_59880 [Schizophyllum commune H4-8] Length = 731 Score = 299 bits (765), Expect = 1e-78, Method: Composition-based stats. Identities = 138/586 (23%), Positives = 233/586 (39%), Gaps = 51/586 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR+L E +IN+IAAGEII RP+ A+KEL+ENSLDA ++ + + GG QI DNG Sbjct: 9 PIRRLDESLINRIAAGEIIHRPASALKELLENSLDAGATSIRVTVKDGGMKLLQIQDNGC 68 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+S D S I T+GFRGEAL S+ VSHL+++S+ +N Sbjct: 69 GIRITDLPILAERFTTSKLSSYSDLSRIQTYGFRGEALASMSHVSHLSVVSKTKTDNCAW 128 Query: 120 QIAIS--------GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + + + + +P A N GT + + DLF+ P RL+ L+S E I DV Sbjct: 129 KAHYADGNLIPAKPGQTAEPKPCAGNNGTTITIEDLFYNTPTRLSALRSASEEYARILDV 188 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN---FPERISQVIGEDFINNAVELNE-- 226 + + A+ P VSF S ++ ++ + I G + + Sbjct: 189 MTKYAVHNPSVSFVCKKAGSPSPDLSTPASAASPAGTQAIIRMTYGSSIVKELIHYYYSS 248 Query: 227 -------------------------KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQD 261 + + + P ++ +FIN R V+ Sbjct: 249 GGDSSDAQGEQKENEDDDMDTEDDVSPKDWSFDAHFTNPNYHAKKMVFL-LFINHRLVES 307 Query: 262 KFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 + I YA +P G P V L +++ P VDVNVHP K ++F N I I S Sbjct: 308 SRLKRAIEGVYATILPKGASPFVYLSIQLHPSTVDVNVHPTKREVQFLNEEEIFATIADS 367 Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 +Q+ + ++G S+ + + + D T+ + R S D Sbjct: 368 VQEKLGQQGGSSRTFQVQVSPVAASDDEDEGGSGEATPIPPRTTKPIPSHFKVRTSAADR 427 Query: 382 LPSDDPTY---SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 S +++ G + + SQ V E Sbjct: 428 TLDSMFPVVNPSLRTQLPADTQPLATAAGTQLTEYKRTIRESQCRLKSVQT-MRKEIEAA 486 Query: 439 IFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH----DEDLHRLGIKAERFGPNA 494 +++ + LT + L ++ H +E ++LG++ +FG + Sbjct: 487 RHQQLTEIIEKHIFVGIVDLTKTLSLLQHSTRLYLVNHCSLAEELFYQLGVR--QFGDLS 544 Query: 495 IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 P L + + I+ ++ +E ++A Sbjct: 545 RMKLSPPPSLRTLVKLGISAEDIEGQTTLKREDIVEKIVEILVARR 590 >gi|302844875|ref|XP_002953977.1| hypothetical protein VOLCADRAFT_94705 [Volvox carteri f. nagariensis] gi|300260789|gb|EFJ45006.1| hypothetical protein VOLCADRAFT_94705 [Volvox carteri f. nagariensis] Length = 1001 Score = 299 bits (765), Expect = 1e-78, Method: Composition-based stats. Identities = 117/380 (30%), Positives = 189/380 (49%), Gaps = 21/380 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL E ++N+IAAGE+I+RP+ A+KE++ENSLDA ++++ ++ GG QITDNG G Sbjct: 17 IRKLDENVVNKIAAGEVIQRPASALKEMLENSLDAGATQISVLVKEGGNKLLQITDNGCG 76 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++P+ RH TSK+ +D I T GFRGEAL SI VSH+T+ + G + Sbjct: 77 VRKEDLPILCHRHTTSKLREYEDLETISTLGFRGEALCSISFVSHMTVTTMARGAQYGYR 136 Query: 121 IAI--SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + S + RPVA PGT + V DLF+ +P R LKS E LI DV+ R A+ Sbjct: 137 VTYKDSEMEPPGPRPVASVPGTTITVEDLFYNVPTRRKALKSANEEYGLILDVVGRYAVY 196 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK----------- 227 V+F+ +R ++ +T G+ + + V G + + L Sbjct: 197 STGVAFSCRRQGDSRPDISTTAT-GSRVDAVRSVYGVEVARELLSLKVAVGSGTGPDVPV 255 Query: 228 --SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVV 285 ++++G ++ G +FINGR V+ + + Y +P P + Sbjct: 256 DGPMGLSVEGLISGANYSTGKKTVLVLFINGRCVECSPLRRALEGLYGALLPKASRPWIF 315 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMI 342 L + + PRQV+VN+HP K + F + + I Q+++ + N+ +S + + Sbjct: 316 LDVRLPPRQVEVNMHPTKREVGFMHQAEVIEAIRQAVEAKLLASNESRTFATSATLQTQL 375 Query: 343 SSFHQDNAPKTHLPKYATSL 362 + LP S+ Sbjct: 376 PFASLPLTQRQSLPAPGRSI 395 >gi|255561542|ref|XP_002521781.1| DNA mismatch repair protein mlh1, putative [Ricinus communis] gi|223538994|gb|EEF40591.1| DNA mismatch repair protein mlh1, putative [Ricinus communis] Length = 735 Score = 298 bits (764), Expect = 2e-78, Method: Composition-based stats. Identities = 102/370 (27%), Positives = 182/370 (49%), Gaps = 7/370 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E ++N+IAAGE+I+RP A+KEL+ENSLDA S+ + V+ GG Q++D+G Sbjct: 22 KIHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDAHSTSINVVVKDGGLKLIQVSDDGH 81 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +RH TSK+S +D +I + GFRGEAL S+ V+H+T+ + G Sbjct: 82 GIRYEDLPILCERHTTSKLSTYEDLQSIKSMGFRGEALASMTYVAHVTVTTITEGQLHGY 141 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + + A GT + V +LF+ + AR L++ + + + D++ R +I Sbjct: 142 RVSYRDGVMEHEPKACAAVKGTQIMVENLFYNMIARRKTLQNSADDYSKVVDLLSRFSIH 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVELNEKSNEITLQGY 236 + VSF+ + R ++ +T+ + I V G N +E +++++ + G+ Sbjct: 202 HTNVSFSCRKHGAARADIHSVATSSRL-DSIRTVYGASAARNLMKIEASDEASNFDMNGF 260 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 + +FIN R V+ + + Y T+P P V + + + P VD Sbjct: 261 ISNSNY-VAKKTTMVLFINDRLVECTTLKRALEIVYTATLPKASKPFVYMSVVLPPEHVD 319 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHP K + N I I +++ + + S S K Sbjct: 320 VNVHPTKREVSLLNQETIVEKIQLAVESKLRSSNEAKSFQEQTIDPSPSCPLGTGKDLKV 379 Query: 357 KYATSLTNTQ 366 +++ + Q Sbjct: 380 DPSSNGSKAQ 389 >gi|115442355|ref|NP_001045457.1| Os01g0958900 [Oryza sativa Japonica Group] gi|57900283|dbj|BAD87116.1| putative MutL homolog 1 protein [Oryza sativa Japonica Group] gi|113534988|dbj|BAF07371.1| Os01g0958900 [Oryza sativa Japonica Group] gi|215737085|dbj|BAG96014.1| unnamed protein product [Oryza sativa Japonica Group] Length = 724 Score = 298 bits (763), Expect = 2e-78, Method: Composition-based stats. Identities = 108/380 (28%), Positives = 184/380 (48%), Gaps = 10/380 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L E ++N+IAAGE+I+RPS A+KELIENSLDA +S V + GG Q++D+G Sbjct: 17 RIRRLEESVVNRIAAGEVIQRPSSAVKELIENSLDAGASSVSVAVKDGGLKLIQVSDDGH 76 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +RH TSK+S +D I + GFRGEAL S+ V H+T+ + G Sbjct: 77 GIRFEDLAILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEGQLHGY 136 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + + +P A GT V V +LF+ + AR L++ + I D I R A+ Sbjct: 137 RVSYRDGVMENEPKPCAAVKGTQVMVENLFYNMVARKKTLQNSNDDYPKIVDFISRFAVH 196 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE-----ITL 233 + V+F+ +NR ++ ST+ + I V G + + +E+ + + Sbjct: 197 HINVTFSCRKHGANRADVHSASTSSRL-DAIRSVYGASVVRDLIEIKVSYEDAADSIFKM 255 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 GY + +FIN R V + I Y+ T+P P + + + + Sbjct: 256 DGYISNANYVAKKITMI-LFINDRLVDCTALKRAIEFVYSATLPQASKPFIYMSIHLPSE 314 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 VDVN+HP K + N I I +I++ + + +S Q N K Sbjct: 315 HVDVNIHPTKKEVSLLNQERIIETIRNAIEEKLMNSNTTRIFQTQALNLSGIAQANPQKD 374 Query: 354 HLPKYATSLTNTQEKLFLQE 373 + + + +K+ + + Sbjct: 375 KVSEASMGSGTKSQKIPVSQ 394 >gi|13430732|gb|AAK25988.1|AF360278_1 putative MLH1 protein [Arabidopsis thaliana] Length = 727 Score = 298 bits (763), Expect = 2e-78, Method: Composition-based stats. Identities = 98/375 (26%), Positives = 179/375 (47%), Gaps = 12/375 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L E ++N+IAAGE+I+RP A+KEL+ENSLDA+SS + V+ GG Q++D+G Sbjct: 18 KIQRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADSSSISVVVKDGGLKLIQVSDDGH 77 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +RH TSK++ +D ++ + GFRGEAL S+ V+H+T+ + G Sbjct: 78 GIRREDLPILCERHTTSKLTKFEDLFSLSSMGFRGEALASMTYVAHVTVTTITKGQIHGY 137 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + + A GT + V +LF+ + AR L++ + I D++ RMAI Sbjct: 138 RVSYRDGVMEHEPKACAAVKGTQIMVENLFYNMIARRKTLQNSADDYGKIVDLLSRMAIH 197 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV-----ELNEKSNEITL 233 Y VSF+ + + ++ + + I V G N + + + Sbjct: 198 YNNVSFSCRKHGAVKADVHSVVSPSRL-DSIRSVYGVSVAKNLMKVEVSSCDSSGCTFDM 256 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 +G+ + +FIN R V+ + I YA T+P P V + + + Sbjct: 257 EGFISNSNY-VAKKTILVLFINDRLVECSALKRAIEIVYAATLPKASKPFVYMSINLPRE 315 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 VD+N+HP K + N II I ++ + + + ++ + + Sbjct: 316 HVDINIHPTKKEVSLLNQEIIIEMIQSEVEVKLR--NANDTRTFQEQKVEYIQSTLTSQK 373 Query: 354 HLPKYATSLTNTQEK 368 + + + + Sbjct: 374 SDSPVSQKPSGQKTQ 388 >gi|30680985|ref|NP_567345.2| MLH1 (MUTL-HOMOLOGUE 1); protein binding, bridging [Arabidopsis thaliana] gi|3893081|emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] gi|7267557|emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gi|332657326|gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] Length = 737 Score = 298 bits (762), Expect = 2e-78, Method: Composition-based stats. Identities = 98/375 (26%), Positives = 179/375 (47%), Gaps = 12/375 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L E ++N+IAAGE+I+RP A+KEL+ENSLDA+SS + V+ GG Q++D+G Sbjct: 28 KIQRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADSSSISVVVKDGGLKLIQVSDDGH 87 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +RH TSK++ +D ++ + GFRGEAL S+ V+H+T+ + G Sbjct: 88 GIRREDLPILCERHTTSKLTKFEDLFSLSSMGFRGEALASMTYVAHVTVTTITKGQIHGY 147 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + + A GT + V +LF+ + AR L++ + I D++ RMAI Sbjct: 148 RVSYRDGVMEHEPKACAAVKGTQIMVENLFYNMIARRKTLQNSADDYGKIVDLLSRMAIH 207 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV-----ELNEKSNEITL 233 Y VSF+ + + ++ + + I V G N + + + Sbjct: 208 YNNVSFSCRKHGAVKADVHSVVSPSRL-DSIRSVYGVSVAKNLMKVEVSSCDSSGCTFDM 266 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 +G+ + +FIN R V+ + I YA T+P P V + + + Sbjct: 267 EGFISNSNY-VAKKTILVLFINDRLVECSALKRAIEIVYAATLPKASKPFVYMSINLPRE 325 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 VD+N+HP K + N II I ++ + + + ++ + + Sbjct: 326 HVDINIHPTKKEVSLLNQEIIIEMIQSEVEVKLR--NANDTRTFQEQKVEYIQSTLTSQK 383 Query: 354 HLPKYATSLTNTQEK 368 + + + + Sbjct: 384 SDSPVSQKPSGQKTQ 398 >gi|195431337|ref|XP_002063699.1| GK15817 [Drosophila willistoni] gi|194159784|gb|EDW74685.1| GK15817 [Drosophila willistoni] Length = 601 Score = 297 bits (761), Expect = 3e-78, Method: Composition-based stats. Identities = 133/571 (23%), Positives = 246/571 (43%), Gaps = 68/571 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+KL E ++N+IAAGEII+RP+ A+KEL+ENSLDA+SS+++ + GG QI DNG G Sbjct: 10 IKKLDEVVVNRIAAGEIIQRPANALKELLENSLDAKSSQIQVQVKAGGLKLLQIQDNGTG 69 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ + +R TSK+ +D + I TFGFRGEAL SI V+H+ + ++ Q G + Sbjct: 70 IRKDDLGIVCERFTTSKLCKFEDLTQIATFGFRGEALASISHVAHMQIQTKTKQEPCGYK 129 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + K+ + +P A N GTI+ + DLF+++P R LKS E ++DV+ + A+ Sbjct: 130 ASYADGKLQGAPKPCAGNQGTIITIEDLFYSMPQRRQALKSPAEEFQKLSDVVSKYAVHN 189 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V FT + + N + E I + G +EL K + Q + Sbjct: 190 PHVGFTLKKQGEAQPALKT-PVNSSRKENIRIIYGSAISKELLELTYKDDTFKFQMDALL 248 Query: 240 PTFNRGNANQ-FYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 N +FIN R V+ + S++ Y+ +P G++P + + L++ P+ +DVN Sbjct: 249 TQVNYSAKKGVMLLFINQRLVESPALKSSLDGIYSTYLPRGQHPFIYMSLQLPPQNLDVN 308 Query: 299 VHPAKSYIRFRNPTIIRNFII----------QSIQKAINKKGISTSSVLSKKMISS---- 344 VHP K + F I I + + + + +S + + +S Sbjct: 309 VHPTKHEVHFLYQDEIIERIKEQVEAQLLGSNATRTFYKQLKLPGASDVLDETQASDKTR 368 Query: 345 -----FHQDNAPKTHLPKYATSLTNTQEKLF---------------LQENRLSTNDLLPS 384 F + ++ + L K+ L + L Q+ S Sbjct: 369 LYPKDFIRTDSQEQKLDKFLAPLKQSDSGLSSASANSTSSGSEVNASQDESFRAVAARKS 428 Query: 385 DDPTYSEDNDPVEESEATHYQLGI-------ACAQIHQNYIISQTTDGLVIVDQHAAHER 437 + S D ++ E + + ++ + Q L + + E Sbjct: 429 KEVRLSSVLDMQQKVERSCNVRLRSILKQLVYVGCVDESRALFQHETQLYMCNTRLFSEE 488 Query: 438 LIFEKMRQDFNSTKITSQTLLTP---------------------EIIDLLEGECALIMEH 476 L ++++ +F + P + ++L A++ + Sbjct: 489 LFYQRLVYEFQNCPEICLQPALPLQDLLVIAMDSEAAGWTPEDGDKLELASSAAAILEQK 548 Query: 477 DEDLHR-LGIKAERFGPNAIAIREIPAILSK 506 + ++ + ++ + +PA+L+K Sbjct: 549 APIMREYFSLRISQNDNGSVVLESLPALLAK 579 >gi|225849567|ref|YP_002729801.1| DNA mismatch repair protein MutL [Persephonella marina EX-H1] gi|259511147|sp|C0QSY6|MUTL_PERMH RecName: Full=DNA mismatch repair protein mutL gi|225645029|gb|ACO03215.1| DNA mismatch repair protein MutL [Persephonella marina EX-H1] Length = 520 Score = 297 bits (760), Expect = 4e-78, Method: Composition-based stats. Identities = 105/324 (32%), Positives = 170/324 (52%), Gaps = 17/324 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ LSE +I +IAAGE++ERP+ +KELIEN++DA S R++ I GGK Q+ DNG Sbjct: 3 RIKPLSEDLIRKIAAGEVVERPANVLKELIENAIDAGSDRIDIFIEKGGKRLIQVVDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ V+R+ TSKIS DD +I ++GFRGEAL SI +VS +++SRP + G Sbjct: 63 GIHPDDMLDCVKRYTTSKISSEDDLYSISSYGFRGEALYSISSVSKFSIVSRPEDLSVGK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I G S GT V V+D+FF P R FLKSE+ E A+ Sbjct: 123 ELYIEGGVFRSFTETGAPVGTKVRVKDIFFNTPVRKKFLKSERTEFVHCLKTFINYAVVN 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 + F + + +RI+ + + +EL+ + GY Sbjct: 183 TDIHFRLYHNGRELMNLPP----SDLKKRITYIYP-ELSGRLLELDYTDETGRIYGYIST 237 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + + V++N R V+++ + I++ +E VL +E+ P VD NV Sbjct: 238 ---DERFKKEGIVYVNKRPVKNRELRKIIKSLISEK-------FYVLFIELPPYFVDHNV 287 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQ 323 HPAK ++F+N T ++N + + ++ Sbjct: 288 HPAKIEVKFKNDTAVKNLVREGLK 311 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 12/187 (6%) Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID-LLEG 468 Q+ +I+ + ++DQH HER+ +E + +D + +L I + E Sbjct: 343 LGQVENTFIVVYYDGDIYLIDQHVVHERINYEILMEDLREDGFIKRKILNRNITHSISEL 402 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ-LLRDIIDEIIDSSTTY 527 E ALI + L R G + G N + I+EIP +S+ R ++DE ++ Sbjct: 403 EKALIEDKKGTLERSGFSFDIDGYN-LVIKEIPVFVSEDQALDIFFRILMDEDAET---- 457 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 ++ ++ +AC S++SG + + +L+ + + + C HGRP + K+ + D Sbjct: 458 -----VDYVIGEIACKLSVKSGDILSDEKAKLILKRWFETDSPNLCPHGRPVYYKVSIDD 512 Query: 588 IEKLFGR 594 ++K GR Sbjct: 513 VKKAIGR 519 >gi|328771889|gb|EGF81928.1| hypothetical protein BATDEDRAFT_33018 [Batrachochytrium dendrobatidis JAM81] Length = 664 Score = 297 bits (760), Expect = 4e-78, Method: Composition-based stats. Identities = 108/343 (31%), Positives = 172/343 (50%), Gaps = 14/343 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++L E +N+IAAGEII RP+ A+KEL+ENSLDA S+ ++ ++ GG QI DNG Sbjct: 9 RIKRLDEVTVNRIAAGEIIHRPANALKELLENSLDAGSTAIQIILKEGGLKLLQIQDNGH 68 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+S +D + I T+GFRGEAL SI ++HL++ +R + Sbjct: 69 GINKDDLSIVCERFTTSKLSKYEDLNKIATYGFRGEALASISHIAHLSITTRTVDSFCSW 128 Query: 120 QIAISGEKI--------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ +P A N GT++ DLF +P R L + E N + +V Sbjct: 129 RACYSDGKLVSAKPGGSVDPKPCAGNVGTLISAEDLFHNVPIRRKSLNNTNEEYNRVLEV 188 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--SN 229 ++R AI VSFT + + S+ + I V G +E Sbjct: 189 VQRYAIHNNNVSFTCKKQNAQISDLQTPSSASKL-DNIRTVFGNTVARELLEFTVDSARW 247 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 E GY FN +FIN R V++ I ++ Y++ +P +P + LE Sbjct: 248 EFKASGYISNANFNM-KKFHLLLFINHRLVENHNIKKSLEALYSKYLPKRTHPFAYISLE 306 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 I P+ +DVNVHP K ++F + I + + + + S Sbjct: 307 IKPQNLDVNVHPTKRIVQFLHEDSIIEVLCDAADSLLAEANNS 349 >gi|194757576|ref|XP_001961040.1| GF13669 [Drosophila ananassae] gi|190622338|gb|EDV37862.1| GF13669 [Drosophila ananassae] Length = 663 Score = 297 bits (760), Expect = 4e-78, Method: Composition-based stats. Identities = 127/495 (25%), Positives = 220/495 (44%), Gaps = 42/495 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL E ++N+IAAGEII+RP+ A+KEL+ENSLDA+SS ++ + GG QI DNG G Sbjct: 9 IRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSSHIQVQVKQGGLKLLQIQDNGTG 68 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ + +R TSK+S +D ++I TFGFRGEAL SI V+HL++ ++ + G + Sbjct: 69 IRKDDLGIVCERFTTSKLSKFEDLTHIATFGFRGEALASISHVAHLSIQTKTAKERCGYK 128 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + K+ +P A N GTI+ + DLF+ +P R L+S E +++V+ R A+ Sbjct: 129 ATYADGKLQGQPKPCAGNQGTIISIEDLFYNMPQRRQALRSPADEFQKLSEVLARYAVHN 188 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE--KSNEITLQGYT 237 P+V FT + + + + E I + G +E + + + + Sbjct: 189 PRVGFTLRKQGEAQPSIRT-PIDSSRSENIRIIYGAAISKELLEFSHRDEVFKFEAECLV 247 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +Q +FIN R V+ + + + + Y+ +P G++P + + L + + VDV Sbjct: 248 TQVNYS-AKKSQMLLFINNRLVESTSLKAALESVYSTYLPRGQHPFIYMSLTLPAQNVDV 306 Query: 298 NVHPAKSYIRFRNPTIIRNFII----------QSIQKAINKKGISTSSVLSKKMISSFHQ 347 NVHP K + F I + S + + + + L + Q Sbjct: 307 NVHPTKHEVHFLYQDEIVERLKEQLEARLLGSNSTRTFYKQLRLPGAPDLDETQPGDKTQ 366 Query: 348 DNAPK---------THLPKYATSLTN---------TQEKLFLQENRLSTNDLLPSDDPTY 389 PK L K+ TSL ++ L E S + Sbjct: 367 RVYPKELVRTDASEQKLEKFFTSLVKSDSGVSSTSSEGAPPLPEESFRQTAARKSREVRL 426 Query: 390 SEDNDPVEESEATHYQLGIACAQ-------IHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 S D + E + + + + Q L + + A E L +++ Sbjct: 427 SSVLDMRQRVERNCSVQLRGIIKNLVYVGCVDERRALFQYETHLYLCNTRAFSEELFYQR 486 Query: 443 MRQDFNSTKITSQTL 457 + +F + S Sbjct: 487 LLYEFQNCPEISLNP 501 >gi|158300415|ref|XP_320342.4| AGAP012192-PA [Anopheles gambiae str. PEST] gi|157013148|gb|EAA00135.4| AGAP012192-PA [Anopheles gambiae str. PEST] Length = 674 Score = 296 bits (759), Expect = 5e-78, Method: Composition-based stats. Identities = 112/337 (33%), Positives = 174/337 (51%), Gaps = 4/337 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL E ++N+IAAGEII+RP+ A+KE+IENSLDA+++ + + GG QI DNG G Sbjct: 6 IRKLDEVVVNRIAAGEIIQRPANALKEMIENSLDAKATSITITVKAGGLRSLQIQDNGTG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ DD S+I T+GFRGEAL SI V+HLT++++ + Sbjct: 66 IRREDLGIVCERFTTSKLQSFDDLSSISTYGFRGEALASISHVAHLTIVTKTKHEKCAYK 125 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 K+ ++P+A N GT + V +LF+ +P R LK+ E I+DV+ + A+ Sbjct: 126 ACYEDGKLKGDIKPIAGNQGTQITVDELFYNVPMRKQALKTPNEEFQRISDVVSKYAVHN 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P F T G +EL ++ ++T++GY Sbjct: 186 PHACFILKKFGETATIRTQAKTTVAHNIGAIYGAGIGKALVPIELRDEVMQLTVEGYVTN 245 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 F+ +FIN R V+ + I YA +P G P V L LE++P+ VDVNV Sbjct: 246 VNFS-LKKGISLMFINHRAVECSALKKAIDAIYAVYLPKGSAPFVYLSLELNPQNVDVNV 304 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 HP K + F + I + +++A+ + S Sbjct: 305 HPTKHEVHFLHEEEIVEKVKLLVERALLGGNAARSYT 341 >gi|156540257|ref|XP_001602327.1| PREDICTED: similar to LOC100036779 protein [Nasonia vitripennis] Length = 708 Score = 296 bits (758), Expect = 7e-78, Method: Composition-based stats. Identities = 122/427 (28%), Positives = 194/427 (45%), Gaps = 21/427 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+KL E ++N IAAGEII+RP+ A+KELIENSLDA+++ ++ + GG Q+ DNG Sbjct: 6 SIKKLDETVVNLIAAGEIIQRPANALKELIENSLDAKATNIQVFVREGGMKLLQVVDNGT 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + + + +R TSK+ DD +I TFGFRGEAL SI VS+ T+ ++ Sbjct: 66 GIRKDNLDIVCERFTTSKLQTFDDLKSISTFGFRGEALASISHVSYFTITTKTKAEKCAY 125 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + S K+ P A N GTI+ V +LF+ + R L S E + I +V+ R A+ Sbjct: 126 KASYSRGKLKEPPTPCAGNQGTIITVENLFYNVSIRKKALNSSSEELSKILEVVTRYAVH 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL--NEKSNEITLQGY 236 P V FT + + I + G +E+ ++ ++ L Sbjct: 186 NPSVGFTLKKYGEAV-NLIRTPCSSTNISNIRLLFGTAIAKELLEVKLDDAKHKFKLHAL 244 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 + G +FIN R V + T++ Y+ +P YP + LEI+P+ VD Sbjct: 245 VTNANYISGKRMTLLLFINHRLVHSSAMKRTLQDMYSVYLPKKAYPWCYISLEIEPQNVD 304 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAI---------------NKKGISTSSVLSKKM 341 VNVHP K+ +RF + I I + + + S KK Sbjct: 305 VNVHPTKNEVRFLHEEAIIKKIKILLNEKLQYEFPQDGFTEKALDKSFPCSQEQADKKKT 364 Query: 342 ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA 401 F +D ++ + T K L+ N+ L D +D DP++E+ + Sbjct: 365 KKIFAKDMIRTSNSDQKLEKFNFTVNKNDLKSTEPEKNEKLDIDTMVLLKDKDPLDEASS 424 Query: 402 THYQLGI 408 + Sbjct: 425 SSKNPDY 431 >gi|303278460|ref|XP_003058523.1| DNA mismatch repair enzyme [Micromonas pusilla CCMP1545] gi|226459683|gb|EEH56978.1| DNA mismatch repair enzyme [Micromonas pusilla CCMP1545] Length = 736 Score = 296 bits (758), Expect = 7e-78, Method: Composition-based stats. Identities = 137/655 (20%), Positives = 247/655 (37%), Gaps = 79/655 (12%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R+LS ++ +++ + +I ++E + NS+DA +++V V+ G ++DNG GM Sbjct: 25 RQLSPELQSKLRSCTVISSIGQLVEECVCNSIDAGATKVSVVVDTGSTLAITVSDNGRGM 84 Query: 64 TSEEIPMAVQRHCTSKISD--DF-SNIHTFGFRGEALPSIGAVSHLTLMSRPPQN----- 115 + ++ +R+ TSK D D NI T GFRGEAL S+ +S L + SR + Sbjct: 85 SVRDVRDVGRRYHTSKCHDLQDLSDNIKTLGFRGEALASMSDLSVLEVTSRAAGSFETYT 144 Query: 116 NTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRR 174 + + R GT++ RDLF P R N ++ Q + + R Sbjct: 145 RISTKAGTATLACGPARYQLPKAGTVITARDLFHNHPVRRNMIRRNLQKQLEDARARVYR 204 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 +A+ +P V + + R ++ + +S G ++ V + + Sbjct: 205 LALIHPAVGVSLTEFNGRRKELMRLPPGRSLLSALSDAFGSALASSLVPVGLTVGPFRAR 264 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAE------------TIPLGRYP 282 GY + ++++N R V+ + ++ A+ T P G +P Sbjct: 265 GYVTPSNRALNSPEVQFLYVNRRFVKKTPLHKAVKDAFNAARDPYESRRGPVTAPPGGHP 324 Query: 283 VVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI--------NKKGISTS 334 VL L+ P + DV K+ I FR+ + + +++++A + Sbjct: 325 GYVLCLDCSPSEYDVTYDVEKTLIEFRDWEMPLRVLNEALREAWPPIKEKEKEPDPLEPP 384 Query: 335 SVLSKKMISSFHQDNAPKTHLPK-------------------YATSLTNTQEKLFLQENR 375 + ++ T P + TN + F+ + Sbjct: 385 PQTREPPVTPPPAVAVGGTETPSKDANGNCICCPPLARRRLGVPSMGTNDDDDAFICQTI 444 Query: 376 LSTNDLLPSDDPTY-----------SEDNDPVEESEATHYQLG---------------IA 409 D P + +PV Sbjct: 445 EPFEDAPPPQQQQQPQPPNDVRSLLATWKNPVPAEMYQPSMPSSTANAVVTRESLENATV 504 Query: 410 CAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTK--ITSQTLLTPEIIDLL 466 Q + +++ ++ G L +DQHA+ ER+ E +R+D + +TS+ L P +L Sbjct: 505 LTQWGKKFVLIRSASGDLFALDQHASDERVRLENLRRDLTARGDAVTSKVLPHPVPCELS 564 Query: 467 EGECALIMEHDEDLHRLGIKAE--RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 E A + + HR G + E G +++ PAI L + + EI Sbjct: 565 AAELATLRANASSAHRWGWRWEDDDAGGGGVSLTGTPAIEGTTLGGDALGEYLREIAAVG 624 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 T + +LA+ AC G+I G ++ E LL E+ K QC HGRPT Sbjct: 625 LTSAPPPALHRLLASKACRGAIMFGDMLRRRECVALLEELRKTQLPLQCAHGRPT 679 >gi|115376219|ref|ZP_01463461.1| DNA mismatch repair protein MutL [Stigmatella aurantiaca DW4/3-1] gi|115366792|gb|EAU65785.1| DNA mismatch repair protein MutL [Stigmatella aurantiaca DW4/3-1] Length = 539 Score = 296 bits (758), Expect = 7e-78, Method: Composition-based stats. Identities = 134/541 (24%), Positives = 237/541 (43%), Gaps = 16/541 (2%) Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M E+ + ++RH TSK+ DD N+ + GFRGEALP+I AVS TL + P+ G + Sbjct: 1 MGREDAVLCLERHATSKLRELDDLENLVSKGFRGEALPAIAAVSRFTLHTAEPEAEVGTR 60 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G V GT++ V DLF+ PARL F++ + E + + + R+A+A+P Sbjct: 61 VTVEGGAGLHVEEAPPRVGTVMTVEDLFYNTPARLKFMRRGETELKHVEEAVIRIALAHP 120 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +VSF + + ERI+ +G D + + E+ +++ G+ P Sbjct: 121 EVSFLVEHGGLPLFTSPACP--EDPTERIAAALGTDVHPHLFSVEERRLGLSITGHIASP 178 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + A Y F+N R V+D+ ++ I+ Y E +P GR P+VVL ++++P VDVNVH Sbjct: 179 EYTLPTARGIYTFVNHRYVRDRGLIGAIQRGYQEYLPSGRQPLVVLFIDVEPHAVDVNVH 238 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAI--NKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 P K +RF + + + ++ +I + + T + H A + L + Sbjct: 239 PQKMEVRFADSRGVYDAVLAAIVRTLRAAPWLGPTPPEGGDPRRQAAHYAQAVERFLTRA 298 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP-------VEESEATHYQLGIACA 411 + L + ++ L+P+ E ++ Sbjct: 299 QEATWGAPLPLPSAADAPASLSLVPAAPVPMGRAPAFGQALPQLNEAPPPGYFAALRPMG 358 Query: 412 QIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 + + + + G LV++D HAA ER+ + K T L ++L Sbjct: 359 VLGGRFQVCEGPGGTLVVLDPHAALERVRLMDFHRLLEEGK-TPPPSLFGTTVELPVPAA 417 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 +M E L LGI E FG + A++ +P L + LL + + + T Sbjct: 418 RALMGGRESLALLGIDVEPFGGTSFALKAVPPGLEGADPRALLEALSHALPPAGTPPDAV 477 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 E L MAC+ + + K+ ++ LL E++ C HG +++ L ++E+ Sbjct: 478 GLAEA-LRVMACHAAQTASDKLTDAQLRALLGELDAADFHPTCRHGTVVVLEMPLLELER 536 Query: 591 L 591 Sbjct: 537 R 537 >gi|260948032|ref|XP_002618313.1| hypothetical protein CLUG_01772 [Clavispora lusitaniae ATCC 42720] gi|238848185|gb|EEQ37649.1| hypothetical protein CLUG_01772 [Clavispora lusitaniae ATCC 42720] Length = 711 Score = 296 bits (758), Expect = 7e-78, Method: Composition-based stats. Identities = 141/593 (23%), Positives = 240/593 (40%), Gaps = 65/593 (10%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I+KL E +IN+IAAGEII +P+ A+KEL+ENS+DA S+ ++ ++ GG QITDN Sbjct: 1 MPTIKKLDENVINRIAAGEIIVQPANALKELLENSVDAGSTMIDVLVKDGGLKLLQITDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +++ + +R TSKIS DD ++I T+GFRGEAL SI +S L+++S+ + Sbjct: 61 GSGIARDDMNLLCERFATSKISTFDDLTSISTYGFRGEALASISHISRLSVVSKTKDSQL 120 Query: 118 GAQIAISGEKISS-------------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVE 164 + K+++ +P+A GT V DLF+ +P+RL +KS+ E Sbjct: 121 AYKAYYVNGKLATAKFKADPTGENSAPKPIAGKDGTQFTVEDLFYNVPSRLRTMKSKSEE 180 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL 224 I DVI R AI V F + ++ + ERI V G ++ +E Sbjct: 181 WARILDVIGRYAIHTENVGFACKKYGESFPSISTRP-QAPLKERIRTVFGTSVASDLIEF 239 Query: 225 NEKSNEI---TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY 281 + K E L+G ++ FIN R V + I + + +P G Sbjct: 240 DIKLEEYGLKRLKGAVTGFSYINKRRMNPVFFINNRLVSCDPLKRGISSIFQVFLPKGNS 299 Query: 282 PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS------- 334 P V L ++I + +DVNVHP K +RF I + Q + ++ + S S Sbjct: 300 PFVYLSMDIATQNLDVNVHPTKREVRFLYEDEIIELVCQHLHDVLSTRDTSRSFKQSTLK 359 Query: 335 ---SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + +SS + + L + S + + N L D + S+ Sbjct: 360 RNTDTGNMDDVSSAVKKYRQENKLVRVDASQPKISAFVRHDFGEIIKNSAL-DDTQSESQ 418 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTT----DGLVIVDQHAAHERLIFEKMRQDF 447 E E + G + Q Q + + + ++ + + + Sbjct: 419 HIKSGEPEEEDTFIEGESIINGTQIEKSMQNQTLPVSHIQFSSTNRQRQNIVLDSLSELK 478 Query: 448 NSTKITSQTLLTPEIIDL--------LEGECALIMEHDEDLHRLG---------IKAERF 490 + + LT +L + C + L G + F Sbjct: 479 QEIEDSVSRPLTNVFNNLVYVGIVDSEKRLCCFQYDVKLFLCDYGAMLCEYYYQVALSEF 538 Query: 491 GPNAIAIREIPAILSKK--NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 G + + P L +I+ + + + ++ + MA Sbjct: 539 GN-----------FGEIVFDEPVTLEEILAPLYEQRDDLEEKTQVIEKIMAMA 580 >gi|328780324|ref|XP_001120100.2| PREDICTED: DNA mismatch repair protein Mlh1 [Apis mellifera] Length = 891 Score = 296 bits (758), Expect = 7e-78, Method: Composition-based stats. Identities = 115/398 (28%), Positives = 189/398 (47%), Gaps = 5/398 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+KL E ++N+IAAGE+I+RP A+KELIENSLDA+++ ++ + GG QI DNG Sbjct: 6 KIKKLDEVVVNRIAAGEVIQRPENALKELIENSLDAKANNIQIIAKEGGLKLLQIQDNGT 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +R TSK+ +D I TFGFRGEAL SI +S LT+ ++ Sbjct: 66 GIRKEDMEIVCERFTTSKLQTFEDLQTISTFGFRGEALASISHISLLTITTKTADEKCAY 125 Query: 120 QIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + K+ + + A N GT + + +LF+ + R L + E N ITDV+ + AI Sbjct: 126 KASYVDGKLKAPLKSCAGNQGTTIVIENLFYNVATRRKALSNPNEEFNRITDVVTKYAIH 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 F ++ N I + G +E+ K + + + Sbjct: 186 NADTGFVLKKHGEIAPQIRT-PHNSTKMNNIRILYGNPVFRELLEVEFKDDTYKFKMHAL 244 Query: 239 IPTFNRGNANQFY-VFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 I N N + +FIN R V+ I + Y+ +P +P + LEIDPR +DV Sbjct: 245 ITNANYTNKKMIFLLFINNRLVKSSSIQKMLEELYSFYLPKKTHPWCYISLEIDPRNIDV 304 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K ++F + I + ++ + ++ S + L ++ + K LP+ Sbjct: 305 NVHPTKHEVKFLHENSIIERMKLALDEKLSANSASRTFYLKTRLPKADITKEVLKEILPE 364 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 Y +N +K+ QE + D + + Sbjct: 365 YEEDNSNKIKKIRPQEMIRTDASDQKLDKFNFMIHKEM 402 >gi|222479064|ref|YP_002565301.1| DNA mismatch repair protein MutL [Halorubrum lacusprofundi ATCC 49239] gi|222451966|gb|ACM56231.1| DNA mismatch repair protein MutL [Halorubrum lacusprofundi ATCC 49239] Length = 767 Score = 296 bits (757), Expect = 8e-78, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 180/351 (51%), Gaps = 13/351 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E+ + +IAAGE++ERP+ +KELIENSLDA ++RV + GG +I D+G G Sbjct: 6 IERLDERTVQRIAAGEVVERPASVVKELIENSLDAGATRVAVSVEAGGTEGIRIRDDGVG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 + ++++ AV H TSKI +D + + T GFRGEAL ++GAVS LT+ SRPP + G+ Sbjct: 66 IPADQLEAAVAEHATSKIGKIEDLDHGVGTLGFRGEALYTVGAVSRLTVRSRPPGADAGS 125 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +I + G + VRP GT VEV LF+ PAR FLK E + + V+ A+A Sbjct: 126 EITVEGGDVGDVRPAGCPEGTTVEVDGLFYNTPARKKFLKRTATEFDRVNAVVTGYALAN 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS-------NEIT 232 P V+ + + NG+ + V G + + V++ + + Sbjct: 186 PGVAVSLEHDGRETF---ATEGNGDLRSAVLAVYGREVADAMVDMEWEPGNSDTDSPVHS 242 Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 + G P R + ++NGR V + + AY + RYP VL +E+ P Sbjct: 243 VTGLVSHPETTRSSREYLATYVNGRYVTAGALRDAVLDAYGGQLAPDRYPFAVLFVEVPP 302 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS 343 VDVNVHP K +RF +R + ++++ A+ G+ S+ + Sbjct: 303 GDVDVNVHPRKLEVRFDEEPAVRAAVEEAVEAALLDHGLIRSTAPRGQSAP 353 Score = 164 bits (414), Expect = 5e-38, Method: Composition-based stats. Identities = 66/251 (26%), Positives = 115/251 (45%), Gaps = 10/251 (3%) Query: 346 HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 ++D+ P + + + Q +T +PT + E Sbjct: 514 NEDSGATDTSPDPTADASGGRREPTAQPRSTATAQRTLDGEPTSA-------ERTYDSLP 566 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 Q+H+ Y+I++ DGLV++DQHAA ER+ +E+++ F +Q L P I+L Sbjct: 567 PLRVLGQLHETYVIAEAPDGLVLIDQHAADERVNYERLQTAFADGA-DAQALAEPVRIEL 625 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII--DS 523 E AL E +DL +G +AER + + +PA+ P+LLRD++ ++ + Sbjct: 626 TAREAALFEEFVDDLAGVGFRAERADEREVVVESVPAVFDAALDPELLRDVLSALVGDAT 685 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + + D ++ +LA +ACY S+ + + LL ++ N C HGRP I+L Sbjct: 686 AGDEPVTDVVDELLADLACYPSVTGNTSLTEGSVVDLLDRLDDCENPYACPHGRPVVIRL 745 Query: 584 KLSDIEKLFGR 594 +I F R Sbjct: 746 NREEIGSRFER 756 >gi|307176631|gb|EFN66099.1| DNA mismatch repair protein Mlh1 [Camponotus floridanus] Length = 868 Score = 296 bits (757), Expect = 8e-78, Method: Composition-based stats. Identities = 112/406 (27%), Positives = 191/406 (47%), Gaps = 7/406 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+KL E ++N+IAAGEII+RP+ A+KELIENSLDA+++ ++ GG QI DNG Sbjct: 6 KIKKLDEIVVNKIAAGEIIQRPANALKELIENSLDAKATNIQITTKEGGLKLLQIQDNGT 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +R TSK+ +D S + TFGFRGEAL SI ++ LT+ ++ Sbjct: 66 GIRKEDMDIVCERFTTSKLQKFEDLSALTTFGFRGEALASISHIALLTITTKTADEKCAY 125 Query: 120 QIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + K+ P A N GTI+ + +LF+ + R L + E N IT+++ + A+ Sbjct: 126 KASYINSKLKAPPAPCAGNQGTIITIENLFYNVATRRKALSNPSEEFNKITEIVMKYAVH 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVELNEKSNEITLQGY 236 P V FT + ++ N I + VELN+ + + +Q Sbjct: 186 NPTVGFTLKKHGESSAQVRT-PHNSTKQSNIRILYTNSVARELLEVELNDDTYKFKMQAL 244 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 + +FIN R V I + Y+ +P +P + L+I+P+ +D Sbjct: 245 VTNANYT-NKRMMMLLFINNRLVDSSSIRKMLEEIYSVYLPKKTHPWCYISLDINPQNID 303 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 VNVHP K +RF + I + ++ + + S + L ++ + LP Sbjct: 304 VNVHPTKHEVRFLHEDTIIERMKFALDERLAGNSASRTFYLQARLPKVDISKEVLEEVLP 363 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 +Y + +K+ +E + + D ++ +S Sbjct: 364 EYNKENPDKLKKVHAKEMIRTDSSDQKLDKFNFTIHTPCKHDSNTF 409 >gi|149236814|ref|XP_001524284.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146451819|gb|EDK46075.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 787 Score = 296 bits (757), Expect = 9e-78, Method: Composition-based stats. Identities = 111/423 (26%), Positives = 197/423 (46%), Gaps = 35/423 (8%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTS 65 L E +IN+IAAGEII +P+ A+KE++ENS+DA+++ +E V+ GG QITDNG G+ Sbjct: 18 LDESVINKIAAGEIIIQPANALKEMLENSIDAKATNIEIVVKEGGLKLLQITDNGQGIDK 77 Query: 66 EEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAI 123 ++ + +R TSK++ +D I T+GFRGEAL SI +S L+++S+ +N + Sbjct: 78 SDLHLLCERFATSKLTKFEDLELIATYGFRGEALSSISHISRLSVVSKTRDSNLAYKAYY 137 Query: 124 SGEKIS-------------SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITD 170 K+ +P+A GT + V DLF+ +P+R LKS+ E I D Sbjct: 138 INGKMCASNFKPATGNTKIEPKPIAGRDGTQITVEDLFYNLPSRFKGLKSKSDEFAKILD 197 Query: 171 VIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN- 229 ++ R AI V F+ +++N ++ ER+ V G + N +E + + Sbjct: 198 IVGRYAIHTGHVGFSCKKHGDPLHQLNTRANLS-IKERVRIVYGSNIANELLEFDFEPTE 256 Query: 230 ---------------EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAE 274 + ++G FN Q +FIN R V + + + + Sbjct: 257 EEDGGNMAYKVPDLGILRVKGTLTNANFNNKKKIQPVIFINHRLVSCDPLRRAMNSVFQF 316 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST- 333 +P G +P + LEI P +DVNVHP K +RF N I + I+ + K ++ S Sbjct: 317 FLPKGSHPFFYISLEIKPENLDVNVHPTKREVRFLNEDEIIDLIVARVHKILSSVDTSRK 376 Query: 334 --SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + + + + ++ + ++ + ++ ++ + + S+ Sbjct: 377 FKTQTIVTRRNNELEEEKLSFGDGSQSESNSQGASQGASQGASQGASQNRTWNASQNASQ 436 Query: 392 DND 394 + Sbjct: 437 YTN 439 >gi|195381773|ref|XP_002049619.1| GJ21695 [Drosophila virilis] gi|194144416|gb|EDW60812.1| GJ21695 [Drosophila virilis] Length = 660 Score = 296 bits (757), Expect = 1e-77, Method: Composition-based stats. Identities = 137/566 (24%), Positives = 230/566 (40%), Gaps = 68/566 (12%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+KL E ++N+IAAGEII+RP+ A+KEL+ENSLDA+SS ++ I GG +I DNG G Sbjct: 6 IKKLDEVVVNRIAAGEIIQRPANALKELLENSLDAKSSHIQVTIKSGGLKLLEIQDNGTG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ + +R TSK+S +D + I TFGFRGEAL SI V+HL++ ++ G + Sbjct: 66 IRKDDLSIVCERFTTSKLSKFEDLTEIATFGFRGEALASISHVAHLSIQTKTASERCGYK 125 Query: 121 IAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 S K ++ +P A N GTI+ + DLF+T+P R LKS E I+DV+ + A+ Sbjct: 126 ATYSDGKLLAPPKPCAGNQGTIITIEDLFYTMPQRRQALKSPAEEFQKISDVLAKYAVHN 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V F + E I + G + + K + + + Sbjct: 186 PQVGFVLRKQGEQPT--LKTQARSSRAENIRAIYGAAVAKELMNFSHKDDMFKFELECQL 243 Query: 240 PTFNRGNAN-QFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 N +FIN R V+ + + + YA +P G++P V + L + P+ +DVN Sbjct: 244 TQVNYAVKKSTLLLFINHRLVESPALKAAVDAVYATYLPRGQHPFVYMSLMLPPQNLDVN 303 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI-------------------------------- 326 VHP K + F I I Q ++ + Sbjct: 304 VHPTKHEVHFLYQEEIIERIKQQMEAKLLGSNATRSFYKQLKLPGSSQLEVTQTQDKTQR 363 Query: 327 --NKKGISTSSVLSK--KMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLL 382 KK + T S K K + + ++ + T E L R S L Sbjct: 364 IYEKKLVRTDSTEQKLDKFFKTLEKSDSGLSSSSGNETPAATQDESFRLTAARKSKEVRL 423 Query: 383 PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 S T + + + + + Q L + + +A E L +++ Sbjct: 424 TSVLNMQQRVERQCHVPLRTILKQLVYVGCVDERRALFQHETRLYMCNTYALSEELFYQR 483 Query: 443 MRQDFNSTKITSQTLLT---------------------PEIIDLLEGECALIMEHDEDLH 481 + +F + S + +L ++ E + Sbjct: 484 LVYEFQNCAEISVVPPLPLQQLLLIALDSRAAGWVPEDGDKTELAANAVCILQEKAPIMR 543 Query: 482 R-LGIKAERFGPNAIAIREIPAILSK 506 ++ G + +PA+L + Sbjct: 544 EYFALRISEQG----CLESLPALLGQ 565 >gi|146417610|ref|XP_001484773.1| hypothetical protein PGUG_02502 [Meyerozyma guilliermondii ATCC 6260] Length = 678 Score = 295 bits (756), Expect = 1e-77, Method: Composition-based stats. Identities = 122/395 (30%), Positives = 196/395 (49%), Gaps = 35/395 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I KL +IN+IAAGEII +P+ A+KELIEN +DA S+ V+ ++ GG QITDNG Sbjct: 8 TITKLDSSVINRIAAGEIIIQPANALKELIENLIDAGSTSVDILVKDGGIKLLQITDNGH 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +R TSK++ +D +I T+GFRGEAL SI ++ L+++++ ++ Sbjct: 68 GIHKEDLQLLCERFATSKLAKFEDLESISTYGFRGEALASISHIARLSVVTKTKTSDLAY 127 Query: 120 QIAI----------SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLIT 169 + + ++ +P A GT + V DLF+ +P+RL LKS+ E + I Sbjct: 128 KAFYLGGKLVGQNFNTNAVAEPKPTAGTDGTQLTVEDLFYNMPSRLKSLKSKNDEYSKIL 187 Query: 170 DVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN 229 DV+ R AI V F+ + ++ + ERI V G N+ ++L N Sbjct: 188 DVVGRYAIHCQNVGFSCKKYGESHQALSTRPHVL-LKERIRIVQGSAIANDLIDLESIKN 246 Query: 230 E--------ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY 281 + ++++G + + +FIN R V + +I AY +P G + Sbjct: 247 KDHAKLVGLLSVEGAITSSDYMNKKKVEPVLFINHRLVSCGPLKRSILAAYYFFLPKGNH 306 Query: 282 PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM 341 P + L LEI+PR VDVN+HP K +RF N I + +Q ++ + Sbjct: 307 PFIYLSLEIEPRNVDVNIHPTKREVRFLNEDEIIEIVTDLVQLTLSSHDSA--------- 357 Query: 342 ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL 376 + +T L K T T K + QEN+L Sbjct: 358 -----RKIPTQTVLSKPRTQPTEPPTKKYRQENKL 387 >gi|46199261|ref|YP_004928.1| DNA mismatch repair ATPase [Thermus thermophilus HB27] gi|81405787|sp|Q72J22|MUTL_THET2 RecName: Full=DNA mismatch repair protein mutL gi|46196886|gb|AAS81301.1| DNA mismatch repair enzyme (predicted ATPase) [Thermus thermophilus HB27] Length = 545 Score = 295 bits (756), Expect = 1e-77, Method: Composition-based stats. Identities = 135/587 (22%), Positives = 235/587 (40%), Gaps = 78/587 (13%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L ++ +A GE++ A++EL+EN+LDA + RV + GGG + D+G G Sbjct: 2 IRPLPPELRGLLARGEVLLTVKDAVRELLENALDAGARRVRVELWGGGLKRLVVEDDGEG 61 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + E++P+AV+ + TSK+ D I T GFRG+AL ++ + L + SRP G + Sbjct: 62 IPLEDLPLAVEPYATSKLQ-DLEGIRTLGFRGQALYALRQAARLRIRSRPRGQLGGGLLL 120 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 GE++ RPV PGT VEV LF L + + E + ++++R + +P++ Sbjct: 121 AEGERVEV-RPVPAPPGTRVEVEGLF------LGEGRDPKGEVRGVLELLKRYLLHHPRL 173 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 + R E G + L + + +QG P Sbjct: 174 ALALFAEGEARLLFP----GAGLEEAARLAFGRLLAKRLLPLAYGAGGLEVQGLVSRPEV 229 Query: 243 NRGNANQFYVFINGRTVQDKF-ILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 +R ++ ++ +NGR V +L +R AY E +P G YPV VL L + + + Sbjct: 230 SRTRPDRLFLAVNGRPVAFPEGLLRRVRRAYRELLPEGHYPVGVLNLFLPQEAFRLRLDA 289 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 K ++ S + + + + + + + + P A+ Sbjct: 290 RKEE------------VVLSEEAEALVEEALLALFRRENLARALPEPKPLQPLSPPTASG 337 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 L AQ ++Y++++ Sbjct: 338 LPR------------------------------------------LRFLAQFRESYLLAE 355 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 D L +VDQHAAHER+++E + + L + E E L Sbjct: 356 AGDTLYVVDQHAAHERILYEDLLKRVAEGPKPLPRPLLVLLAPEEEALLEAGQEALAAL- 414 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 + E FGP + + PA L + LL ++ E + +L+ +LA +A Sbjct: 415 ---FRWEPFGPGRVRLLMAPAFLHPYPL--LLPEVFKEAL-RGEGRSLK----ALLARLA 464 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 C ++++G + + LL + C HGRP + LK D+ Sbjct: 465 CLPAVKAGHPLGEAQGQALLDALLTCETPWACPHGRPVLLALKEEDL 511 >gi|34763430|ref|ZP_00144378.1| DNA mismatch repair protein mutL [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886899|gb|EAA24023.1| DNA mismatch repair protein mutL [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 675 Score = 295 bits (756), Expect = 1e-77, Method: Composition-based stats. Identities = 118/336 (35%), Positives = 186/336 (55%), Gaps = 15/336 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E + N IAAGE++E P+ IKELIENSLDA S ++ + GG I+D+G Sbjct: 3 RIRILDESVSNAIAAGEVVENPTSMIKELIENSLDAGSKEIKLEVWNGGLD-ISISDSGC 61 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E++ ++++RH TSKI DD NI T+GFRGEAL SI +VS + L SR G Sbjct: 62 GMSKEDLLLSIERHATSKIFTKDDLFNIRTYGFRGEALSSIASVSKMILSSRTEDMQNGT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 Q+ + G K+++++ + N GT +E++DLF+ PAR FL+ E E I D+ + A+A Sbjct: 122 QMNVLGGKVTNLKDIQRNIGTQIEIKDLFYNTPARKKFLRKENTEYLNIKDIFLKEALAN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F + K ++ I ++ G++++ N + + GY G Sbjct: 182 PNVKFILNIEGKESIK----TSGNGIENAILEIFGKNYLKNFSKFSL--------GYLGN 229 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 + N + +VFINGR+V+ K + + AY + G+YP ++ LE++P ++DVNV Sbjct: 230 ANLFKANRDSIFVFINGRSVKSKIVEEAVIAAYHTKLMKGKYPTALIFLEVEPSEIDVNV 289 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS 335 HP+K ++F N I + + I+ S Sbjct: 290 HPSKKVVKFANQNAIFDLVKGEIENFFTDDEDFISP 325 Score = 176 bits (447), Expect = 7e-42, Method: Composition-based stats. Identities = 57/199 (28%), Positives = 102/199 (51%), Gaps = 5/199 (2%) Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 ++ + Q+ +I+ + L I DQH HER+++EK++Q++ + ++ Q Sbjct: 481 FDDFSSLKNIDFKVIGQVFDTFILVERNGLLEIYDQHIIHERILYEKLKQEYYNHSMSKQ 540 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 +LL P +L E L +E+ E G + F N I +R IP + + + + R+ Sbjct: 541 SLLVPIRFELDPREKQLALENIEIFSSFGFDIDDFDKNEILLRSIPTMNLRDSYENIFRE 600 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 I+D I + D ENI+ +M+C G+I++ K+ EM ++ ++ + C H Sbjct: 601 ILDNISKNKDI----DIRENIIVSMSCKGAIKANHKLTIEEMYSMVAKLHEVGE-YTCPH 655 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRP +K+ L D+EKLF R Sbjct: 656 GRPIIVKMSLLDLEKLFKR 674 >gi|254567882|ref|XP_002491051.1| Protein required for mismatch repair in mitosis and meiosis as well as crossing over during meiosis [Pichia pastoris GS115] gi|238030848|emb|CAY68771.1| Protein required for mismatch repair in mitosis and meiosis as well as crossing over during meiosis [Pichia pastoris GS115] gi|328352423|emb|CCA38822.1| DNA mismatch repair protein mutL [Pichia pastoris CBS 7435] Length = 633 Score = 295 bits (755), Expect = 1e-77, Method: Composition-based stats. Identities = 131/533 (24%), Positives = 226/533 (42%), Gaps = 28/533 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KEL+EN++DA+S+ ++ +I GG Q+TDNG Sbjct: 4 RIKALDIDVVNKIAAGEIIVAPENALKELLENAIDAKSTSIDIIIQDGGLKLLQMTDNGV 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +R TSK+S +D ++I T+GFRGEAL SI +S LT+ ++ + Sbjct: 64 GIYKEDLPILCERFTTSKLSTFEDLNSIGTYGFRGEALASISHISRLTVTTKTKDSACAY 123 Query: 120 QIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + ++ +PVA GT + + DLF+ +P+RL LK + + I DV+ R AI Sbjct: 124 RAIYQEGRMVGEPKPVAGKDGTQILIEDLFYNVPSRLRSLKGGNEQLSKILDVVARYAIN 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN----AVELNEKSNEITLQ 234 V+F+ + N + +++ V G + AVE +E+ ++ + Sbjct: 184 TDGVAFSVKKAGD-TLNLLAVRANNSTKDKVRTVFGSAVASELLPIAVEKSEEIGLLSCE 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G ++ + FINGR V + I Y+ +P G P V L ++I Sbjct: 243 GQITNTSYYSKKSVSPIFFINGRLVSCDPLKRMITQLYSSFLPKGHKPFVYLRIDIKREN 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 +DVNVHP K +RF I I QSIQ + S V ++ ++ + T Sbjct: 303 LDVNVHPTKREVRFLFEDEIFQVIFQSIQAKLGSLDHSRKFVTTQSVLKHQYAPQEEITK 362 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY----SEDNDPVEESEATHYQLGIAC 410 P+ + Q K+ N +T S + ++ E + Sbjct: 363 KPQTLLRTDDLQSKITAFINTTNTESFGTIVKDRVTVKLSSILELRQQLENKVSEDLTNM 422 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 H + L + + + + + S + E Sbjct: 423 FAKHTYVGLVDPNRRLCCIQYDVKLFLVDYASISYELIYQIGLSDFNNFGTLYLESEKPI 482 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 E L I E +P I ++ + L ++ D +++ Sbjct: 483 ----TIRELLE---IVYESID------TSVPPI---DDVLEALFEMKDMLLEY 519 >gi|45198322|ref|NP_985351.1| AFL199Cp [Ashbya gossypii ATCC 10895] gi|44984209|gb|AAS53175.1| AFL199Cp [Ashbya gossypii ATCC 10895] Length = 771 Score = 295 bits (755), Expect = 1e-77, Method: Composition-based stats. Identities = 111/380 (29%), Positives = 189/380 (49%), Gaps = 11/380 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KE++ENS+DA ++ V+ ++ GG QI+DNG Sbjct: 48 RIKALEASVVNKIAAGEIIISPVNALKEMMENSIDAGATNVDILVKDGGIKMLQISDNGC 107 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+ +D S I T+GFRGEAL SI ++ L ++++ +N Sbjct: 108 GIMKDDLPILCERFTTSKLKSFEDLSRIQTYGFRGEALASISHIARLHVVTKTKENQCAW 167 Query: 120 QIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + +P A GT + V+DLF+ +P+RL L+S E I DV+ + AI Sbjct: 168 KAVYENGVMVGEPKPTAGKDGTTILVQDLFYNVPSRLRALRSPSEEFAKIVDVVGKYAIH 227 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL----NEKSNEITLQ 234 V F+ +Y +N + + ++I V G + N VE+ + + + Sbjct: 228 SDGVGFSCKKFGETQYALNVR-GTSSKSDKIRAVFGAPVVANLVEVDISADPEHGLTSSS 286 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G P FN + FIN R V + + Y+ +P G P + + L I P Sbjct: 287 GQITTPDFNNKKSIPAVFFINNRLVSCDPLRRALSQVYSNFLPKGNKPFIYMSLHITPEN 346 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHP K +RF + I + + +++ S + K + + ++ + Sbjct: 347 VDVNVHPTKREVRFLYEEELIERIGNLLHERLSQLDTSRT---FKPGSLTPGKHSSTVSS 403 Query: 355 LPKYATSLTNTQEKLFLQEN 374 + + + +TQ K EN Sbjct: 404 AFRQSATPASTQPKAKRAEN 423 >gi|326426663|gb|EGD72233.1| hypothetical protein PTSG_00253 [Salpingoeca sp. ATCC 50818] Length = 891 Score = 295 bits (755), Expect = 2e-77, Method: Composition-based stats. Identities = 105/343 (30%), Positives = 168/343 (48%), Gaps = 14/343 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L E ++N+IAAGE+I+RP+ AIKE+ EN+LDA +S + V+ GG QI D+G Sbjct: 6 RIVRLEEDVVNRIAAGEVIQRPANAIKEMFENALDAGASSISVVVKSGGLKMLQIQDDGH 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK++ +D + I T GFRGEAL SI V+HL+++SR + Sbjct: 66 GINRKDMDIVCERFTTSKLTKFEDLTTIATHGFRGEALASISHVAHLSIISRTKDSPCAY 125 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + K++ +P A N GT + V DLFF +P R LKS E N I D+ Sbjct: 126 KAHYRDGKLTPPKPGKPSDPKPCAGNQGTQITVEDLFFNVPTRRRALKSPSDELNRIMDI 185 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVELNEKSN 229 + R A+ V + + + I+ + G N +E ++ Sbjct: 186 MSRYAVHNSGVGVSLKKHGETSPLLRTTPG-ATTRDNIAAIYGSKVANELLEIEDADEEL 244 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 ++G+ ++ +FIN R V I + + YA +P + + LE Sbjct: 245 AFKVRGFITNANYSVKKPT-LLLFINHRAVHSTNIRKALDSVYAAYLPRHTHCFAYISLE 303 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 I P VDVNVHP K + F + I + Q + K + +S Sbjct: 304 IKPEHVDVNVHPTKKEVHFLHEEDIVERLQQLVSKRLVGGNMS 346 >gi|320449601|ref|YP_004201697.1| DNA mismatch repair protein MutL [Thermus scotoductus SA-01] gi|320149770|gb|ADW21148.1| DNA mismatch repair protein MutL [Thermus scotoductus SA-01] Length = 567 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 144/622 (23%), Positives = 248/622 (39%), Gaps = 114/622 (18%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGK----------- 51 IR L E++ +A GE++ ++EL+EN+LDA + RV + GGG+ Sbjct: 2 IRPLPEELRGLLARGEVVFSLRDVVRELLENALDAGAKRVRVELYGGGRERAFPEGNTWR 61 Query: 52 ----------------SFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGE 95 + D+G G+ E+P+AV+ TSK+ D I T GFRG+ Sbjct: 62 AFPEGNTWRAFPEGNTWRIVVEDDGQGIPLAELPLAVEPFATSKLL-DPGRITTLGFRGQ 120 Query: 96 ALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARL 155 AL ++ + L + SRP G + GE++ VR V PGT VEV + + Sbjct: 121 ALYALRQAALLRIRSRPRFQVGGGLLLARGERV-EVREVPAPPGTRVEVVG-WEGEGSER 178 Query: 156 NFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGE 215 + +++RR + YP +S F R E G Sbjct: 179 E-----------VAELLRRYLLHYPWLSLAFFAEGEARLLFP----GAGLKEAARLAFGR 223 Query: 216 DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTV-QDKFILSTIRTAYAE 274 + + ++ + LQG P +R + ++ INGR V + +L T+R AY E Sbjct: 224 VLTERLLPVEREAGGMRLQGLLSGPQASRTRPDLLFLAINGRPVAWPEGLLKTVRRAYRE 283 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 +P G +PV VL L + + + K + F+ + +++A + ++ S Sbjct: 284 LLPEGHFPVGVLNLTLPLEAFRLRLDARKEEVAVLEEVE--AFVEEGLREAFQRHNLARS 341 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 P+ +P + + Sbjct: 342 LPE-------------PRPLMPLSPPTPSGLPP--------------------------- 361 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 Q +Y++++ D L +VDQHAAHER+++E+ ++ + Sbjct: 362 ------------LRYLGQFRGSYLLAEAGDTLYLVDQHAAHERVLYEEFQRRLKEEGL-- 407 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS--KKNIPQL 512 + L P +++L E L+ E E L L E FGP + + P+ L +P++ Sbjct: 408 RELPYPVLVELSPAEEVLLPERQEALASL-FALEAFGPGRVRLLAAPSFLHPYPLLLPEI 466 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 R+ + +L +LA +AC ++++G + E LL + + Sbjct: 467 FREALR-----GEGKSLT----ELLARLACLPAVKAGHPLSRAEGQALLDALLQCQTPWV 517 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGRPT + LK D+ + FGR Sbjct: 518 CPHGRPTLLALKEEDLIRRFGR 539 >gi|156845600|ref|XP_001645690.1| hypothetical protein Kpol_1043p22 [Vanderwaltozyma polyspora DSM 70294] gi|156116357|gb|EDO17832.1| hypothetical protein Kpol_1043p22 [Vanderwaltozyma polyspora DSM 70294] Length = 743 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 117/406 (28%), Positives = 197/406 (48%), Gaps = 8/406 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L ++N+IAAGEII P A+KE++ENS+DA S ++ ++ GG QITDNG Sbjct: 4 KIKALDPSVVNKIAAGEIIISPVNALKEMMENSIDAGCSSIDILVKDGGIKVLQITDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+S +D NI T+GFRGEAL SI +S +T+ ++ + Sbjct: 64 GIEKDDLPILCERFTTSKLSKFEDLGNIETYGFRGEALASISHISRVTVTTKTKNDQCAW 123 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ S K+ +PVA GT++ V DLF+ IP+RL L+S E + I DV+ R A+ Sbjct: 124 KVSYSEGKMLGQPKPVAGRDGTVILVEDLFYNIPSRLRSLRSPSDEYSKILDVVGRYAVH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN----AVELNEKSNEITLQ 234 + F+ + + + + ++ ERI V G + ++ + E + Sbjct: 184 SKDIGFSCKKMGDSNFTLTVRANL-TIQERIRTVFGNNVSSHLIDYELPEIEDIGVKRID 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G F + Q FIN R V + ++ + + G + L + IDP+ Sbjct: 243 GQVTDLNFQMKKSIQPIFFINNRLVTCDPLRRSLNQVFGTYLSKGFKAFIYLNILIDPQS 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHP K +RF N I I + ++K S + S + + Sbjct: 303 VDVNVHPTKREVRFLNQDEIIEKINFHLNDELSKLNTSRTFKTSTLLTGQPVEVTVVSNS 362 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 A+ +Q +L +N++ + L+ +D + +E Sbjct: 363 QNSNASRPVRSQSQLQQIKNKIYEHKLVRTDSSQSKITSFMKPPTE 408 >gi|195149506|ref|XP_002015698.1| GL11208 [Drosophila persimilis] gi|194109545|gb|EDW31588.1| GL11208 [Drosophila persimilis] Length = 675 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 109/328 (33%), Positives = 175/328 (53%), Gaps = 5/328 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL E ++N+IAAGEII+RP+ A+KEL+ENSLDA+SS ++ + GG + QI DNG G Sbjct: 10 IRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAKSSHIQVHVKSGGLTLLQIQDNGTG 69 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK++ +D S I TFGFRGEAL SI V+HLT+ ++ Q G + Sbjct: 70 IRREDLEIVCERFTTSKLAKFEDLSQIATFGFRGEALASISHVAHLTIQTKTAQERCGYK 129 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ +P A N GTI+ + DLF+ + R LKS E ++DV+ + A+ Sbjct: 130 AIYADGRLQGQPKPCAGNQGTIITIEDLFYNMSQRRQALKSPGDEFQKLSDVLAKYAVHN 189 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V FT + + + E I + G + + K+ + + Sbjct: 190 PQVGFTLRKQGEPQPSLKT-PVASSRSENIRIIYGAGISKELLHFSHKNEVFKFEVECLL 248 Query: 240 PTFNRG-NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 N +Q +FIN R V+ + + YA +P G +P V + L++ P+ +DVN Sbjct: 249 TQVNYSAKRSQMLLFINQRLVESPALKCAVDAVYATYLPRGHHPFVYMSLKLPPQNLDVN 308 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 VHP K + F I + + ++ + Sbjct: 309 VHPTKHEVHFLYQDEIVERLKEQVEIQL 336 >gi|91088905|ref|XP_972898.1| PREDICTED: similar to Mlh1 CG11482-PA [Tribolium castaneum] gi|270011580|gb|EFA08028.1| hypothetical protein TcasGA2_TC005617 [Tribolium castaneum] Length = 648 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 134/488 (27%), Positives = 211/488 (43%), Gaps = 20/488 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+KL E +IN+IAAGEII+RP+ A+KE+IENSLDA S+ ++ + GG QI DNG G Sbjct: 7 IKKLDEAVINRIAAGEIIQRPANALKEMIENSLDAHSTNIQITVKNGGLKLLQIQDNGTG 66 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++ + +R TSK+ DD NI T+GFRGEAL SI ++HLT++S+ + Sbjct: 67 IRKDDFAIVCERFTTSKLREFDDLQNIATYGFRGEALASISHIAHLTIVSKTCNELCAYK 126 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 K+ + P A N GTIV V DLFF + R L+S E I++V+ + AI Sbjct: 127 AHFVDGKLQGAPLPTAGNQGTIVTVEDLFFNMSVRKKALRSPAEEYQKISEVVGKYAIHN 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ--GYT 237 KV F KSN + E I V V+ +++ + + GY Sbjct: 187 SKVGFGLR--KSNENNDIRTPPDSTCVENIRIVYSNTIARELVDFELENDILKFKARGYM 244 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 ++ +FIN R V + I YA +P +P V L LE+DP VDV Sbjct: 245 TNVNYSSKKFTFL-LFINNRLVDCNNLKKCIDQVYATYLPKNSHPFVYLSLELDPVSVDV 303 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K + F N I + +++ + K S K+ + +LP Sbjct: 304 NVHPTKHEVHFLNEDQIVEAVCGALETRLLKSNNSRVYYTQAKLPGA------QADNLPL 357 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 T + K F++ + S + SE + ++ + + Sbjct: 358 KDTDKSKIYPKEFVRTD-ASEQKIEKFFGAPMSEKEGLSAPFISKVNRVDTELTSVLELR 416 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 + V+ D A H + + + +++ L + E ++ + Sbjct: 417 KAVEKNCHRVLRDLFAQH--VFVGAINPSQALIQYSTKLFLCNTRKIMTELLYQFVLYN- 473 Query: 478 EDLHRLGI 485 G Sbjct: 474 --FQNFGF 479 >gi|198456278|ref|XP_001360282.2| GA11026 [Drosophila pseudoobscura pseudoobscura] gi|198135556|gb|EAL24857.2| GA11026 [Drosophila pseudoobscura pseudoobscura] Length = 675 Score = 294 bits (753), Expect = 3e-77, Method: Composition-based stats. Identities = 109/328 (33%), Positives = 175/328 (53%), Gaps = 5/328 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL E ++N+IAAGEII+RP+ A+KEL+ENSLDA+SS ++ + GG + QI DNG G Sbjct: 10 IRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAKSSHIQVHVKSGGLTLLQIQDNGTG 69 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK++ +D S I TFGFRGEAL SI V+HLT+ ++ Q G + Sbjct: 70 IRREDLEIVCERFTTSKLAKFEDLSQIATFGFRGEALASISHVAHLTIQTKTAQERCGYK 129 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ +P A N GTI+ + DLF+ + R LKS E ++DV+ + A+ Sbjct: 130 AIYADGRLQGQPKPCAGNQGTIITIEDLFYNMSQRRQALKSPGDEFQKLSDVLAKYAVHN 189 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+V FT + + + E I + G + + K+ + + Sbjct: 190 PQVGFTLRKQGEPQPSLKT-PVASSRSENIRIIYGAGISKELLHFSHKNEVFKFEVECLL 248 Query: 240 PTFNRG-NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 N +Q +FIN R V+ + + YA +P G +P V + L++ P+ +DVN Sbjct: 249 TQVNYSAKRSQMLLFINQRLVESPALKCAVDAVYATYLPRGHHPFVYMSLKLPPQNLDVN 308 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 VHP K + F I + + ++ + Sbjct: 309 VHPTKHEVHFLYQDEIVERLKEQVEIQL 336 >gi|51245818|ref|YP_065702.1| DNA mismatch repair protein MutL [Desulfotalea psychrophila LSv54] gi|50876855|emb|CAG36695.1| probable DNA mismatch repair protein MutL [Desulfotalea psychrophila LSv54] Length = 342 Score = 293 bits (749), Expect = 7e-77, Method: Composition-based stats. Identities = 104/337 (30%), Positives = 171/337 (50%), Gaps = 6/337 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L E++ NQIAAGE++ERP+ +KELIENSLDA + R+E I GGG +I DNG Sbjct: 3 KIRILPEQLANQIAAGEVVERPASVVKELIENSLDAGADRIEVEIVGGGTKLIRIIDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++I + ++RH TSKI +D I T GFRGEALPSIG+VS L++ SR + G Sbjct: 63 GMDGDDIFLCLERHGTSKIRNQEDLGAISTLGFRGEALPSIGSVSQLSISSRTYNSELGY 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + + GTI+E+R+LF +PAR FL++ + E I +VI+ ++ Sbjct: 123 RVELRYGTLVKSHETGCAVGTIIEIRNLFGNVPARRKFLRTTRTELGHIDEVIKNYSLVA 182 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 VSF + S + N +R+++++ + ++ + + G Sbjct: 183 SDVSFVLRVDGRETINL---SGSFNLIQRLAKIMHQPEEFFPIDFSTDGEH-RVTGLLLA 238 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + + VF+NGR V+D+ I+ + + G+ P ++LLE+ P ++ + Sbjct: 239 PEKVSPGSARLRVFVNGRAVKDRMIVHAVAEGMRGFLMKGKNPAGLILLEVPPEEMTLTF 298 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 F ++ + + S + Sbjct: 299 IRQNMKFVFAGLRRCTDWCKPGFLLPLGQSRAIYSKI 335 >gi|297744800|emb|CBI38068.3| unnamed protein product [Vitis vinifera] Length = 366 Score = 292 bits (748), Expect = 9e-77, Method: Composition-based stats. Identities = 95/337 (28%), Positives = 168/337 (49%), Gaps = 10/337 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L + ++N+IAAGE+I+RP A+KEL+ENSLDA S+ + V+ GG Q++D+G Sbjct: 17 RIHRLDQSVVNRIAAGEVIQRPVSAVKELVENSLDAHSTSINVVVKDGGLKLIQVSDDGH 76 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +RH TSK+S +D +I + GFRGEAL S+ V H+T+ + G Sbjct: 77 GIRYEDLPILCERHTTSKLSEFEDLQSIKSMGFRGEALASMTYVGHVTVTTITAGQLHGY 136 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + + A GT + + +LF+ + AR L++ + I D++ R AI Sbjct: 137 RVSYRDGVMEHEPKACAAVKGTQIMIENLFYNMTARRKTLQNSADDYPKIVDLLSRFAIH 196 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV-----ELNEKSNEITL 233 + V+F+ + R ++ +T+ + I V G N + + + S+ + Sbjct: 197 HINVNFSCRKHGAARADVHTVATSSRL-DAIRSVFGVSVARNLMKIEAADDDVSSSVFEM 255 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G+ + +FIN R V+ + I YA T+P P + + + + Sbjct: 256 DGFISNSNY-IAKKTTMVLFINDRLVECTALKRAIEIVYAATLPKASKPFIYMSIVLPSE 314 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 VDVN+HP K + N I I + + + Sbjct: 315 HVDVNIHPTKREVSLLNQEAIIEKIQSAFESKLRNSN 351 >gi|149920377|ref|ZP_01908847.1| DNA mismatch repair protein [Plesiocystis pacifica SIR-1] gi|149818819|gb|EDM78261.1| DNA mismatch repair protein [Plesiocystis pacifica SIR-1] Length = 721 Score = 291 bits (746), Expect = 2e-76, Method: Composition-based stats. Identities = 107/374 (28%), Positives = 180/374 (48%), Gaps = 5/374 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS + +QIAAGE++ERP+ +KEL++N++DA + RVE + GGG+ ++ D+G Sbjct: 15 RIAVLSAALADQIAAGEVVERPASIVKELVDNAVDAGARRVEVELTGGGRDGIRVVDDGR 74 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++P+A+ RH TSK+ D I T GFRGEAL SI AV+ + L SR G Sbjct: 75 GIHAEDLPLALTRHATSKLDDPAQLIEIRTLGFRGEALASIAAVARVDLRSRRRGEGVGH 134 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + SV P+ M GT V + LF +PAR FL+SE E D + R+A+ + Sbjct: 135 RARSVPGEALSVEPIGMPEGTQVSIEALFANVPARRKFLRSEATEVGHCVDAVIRIALVH 194 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V F ++ +++ G + + + + ++ + Sbjct: 195 PGVQFKLRHNGRKLLELAAGDLGARVSSLLTRRGGT---GPYLHVAGERRGVEVEAWLAP 251 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P N +V + R V+++ + +R YAE +P R+PV L +E P VDVNV Sbjct: 252 PEGASRQRNASFVVVRRRVVRERTLAKMLRELYAERLPAQRHPVACLFVEPPPGTVDVNV 311 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP KS +RF + + + + + + T+ + ++ + Sbjct: 312 HPQKSEVRFSSAQDVFAAVREVLDEGSAGAPWRTAEGAAIPDDGAWPEPGPGAGASVARD 371 Query: 360 TSLTNTQEKLFLQE 373 ++ + L E Sbjct: 372 EGSSSEGARAALAE 385 >gi|55981292|ref|YP_144589.1| DNA mismatch repair protein MutL [Thermus thermophilus HB8] gi|62298031|sp|Q9RA54|MUTL_THET8 RecName: Full=DNA mismatch repair protein mutL gi|55772705|dbj|BAD71146.1| DNA mismatch repair protein MutL [Thermus thermophilus HB8] Length = 545 Score = 291 bits (746), Expect = 2e-76, Method: Composition-based stats. Identities = 136/587 (23%), Positives = 234/587 (39%), Gaps = 78/587 (13%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L ++ +A GE++ A++EL+EN+LDA + RV + GGG + D+G G Sbjct: 2 IRPLPPELRGLLARGEVLLTVKDAVRELLENALDAGARRVRVELWGGGLKRLVVEDDGEG 61 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + E++P+AV+ + TSK+ D I T GFRG+AL ++ + L + SRP G + Sbjct: 62 IPLEDLPLAVEPYATSKLQ-DLEGIRTLGFRGQALYALRQAARLRIRSRPRGQLGGGLLL 120 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 GE++ RPV PGT VEV LF L + + E + ++++R + +P++ Sbjct: 121 AEGERVEV-RPVPAPPGTRVEVEGLF------LGEGRDPKGEVRGVLELLKRYLLHHPRL 173 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 + R E G + L + + +QG P Sbjct: 174 ALALFAEGEARLLFP----GAGLEEAARLAFGRLLAKRLLPLAYGAGGLEVQGLVSRPEV 229 Query: 243 NRGNANQFYVFINGRTVQDKF-ILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 +R ++ ++ +NGR V +L +R AY E +P G YPV VL L + Sbjct: 230 SRTRPDRLFLAVNGRPVAFPEGLLRRVRRAYRELLPEGHYPVGVLNLFL----------- 278 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 P + + ++ + + V + ++ A PK Sbjct: 279 ---------PQEAFRLRLDARKEEVVLSEEVEALVEEALLALFRRENLARALPEPKPLQP 329 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 L+ + AQ ++Y++++ Sbjct: 330 LSPPTASGLPR----------------------------------LRFLAQFRESYLLAE 355 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 D L +VDQHAAHER+++E + + L + E E L Sbjct: 356 AGDTLYVVDQHAAHERILYEDLLKRVAEGPKPLPRPLLVPLAPEEEALLEAGQEALAAL- 414 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 + E FGP + + PA L + LL ++ E + +L+ +LA +A Sbjct: 415 ---FRWEPFGPGRVRLLMAPAFLHPYPL--LLPEVFKEAL-RGEGRSLK----ALLARLA 464 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 C ++++G + + LL + C HGRP + LK D+ Sbjct: 465 CLPAVKAGHPLGEAQGQALLDALLACETPWACPHGRPVLLALKEEDL 511 >gi|6518488|dbj|BAA87903.1| Mismatch repair enzyme (MutL) [Thermus thermophilus] Length = 545 Score = 291 bits (746), Expect = 2e-76, Method: Composition-based stats. Identities = 137/587 (23%), Positives = 234/587 (39%), Gaps = 78/587 (13%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L ++ +A GE++ A++EL+EN+LDA + RV + GGG + D+G G Sbjct: 2 IRPLPPELRGLLARGEVLLTVKDAVRELLENALDAGARRVRVELWGGGLKRLVVEDDGEG 61 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + E++P+AV+ + TSK+ D I T GFRG+AL ++ + L + SRP G + Sbjct: 62 IPLEDLPLAVEPYATSKLQ-DLEGIRTLGFRGQALYALRQAARLRIRSRPRGQLGGGLLL 120 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 GE++ RPV PGT VEV LF L + + E + ++++R + +P++ Sbjct: 121 AEGERVEV-RPVPAPPGTRVEVEGLF------LGEGRDPKGEVRGVLELLKRYLLHHPRL 173 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 + R E G + L + + +QG P Sbjct: 174 ALALFAEGEARLLFP----GAGLEEAARLAFGRLLAKRLLPLAYGAGGLEVQGLVSRPEV 229 Query: 243 NRGNANQFYVFINGRTVQDKF-ILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 +R ++ ++ +NGR V +L +R AY E +P G YPV VL L + Sbjct: 230 SRTRPDRLFLAVNGRPVAFPEGLLRRVRRAYRELLPEGHYPVGVLNLFL----------- 278 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 P + + ++ + + V + ++ A PK Sbjct: 279 ---------PQEAFRLRLDARKEEVVLSEEVEALVEEALLALFRRENLARALPEPKPLQP 329 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 L+ + AQ ++Y++++ Sbjct: 330 LSPPTASGLPR----------------------------------LRFLAQFRESYLLAE 355 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 D L +VDQHAAHER+++E + + L + E E L Sbjct: 356 AGDTLYVVDQHAAHERILYEDLLKRVAEGPKPLPRPLLVPLAPEEEALLEAGQEALAAL- 414 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 + E FGP + + PA L + LL ++ E + TL+ +LA +A Sbjct: 415 ---FRWEPFGPGRVRLLMAPAFLHPYPL--LLPEVFKEAL-RGEGRTLK----ALLARLA 464 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 C ++++G + + LL + C HGRP + LK D+ Sbjct: 465 CLPAVKAGHPLGEAQGQALLDALLACETPWACPHGRPVLLALKEEDL 511 >gi|316968447|gb|EFV52725.1| DNA mismatch repair protein Mlh1 [Trichinella spiralis] Length = 714 Score = 291 bits (745), Expect = 2e-76, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 176/338 (52%), Gaps = 7/338 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ L + +I++IAAGE+I P +KEL+ENS+DA ++++ I+GGG +I DNG Sbjct: 6 PIKPLKKCVIDRIAAGEVILSPMNVVKELMENSVDAGANQINISISGGGLKLIRIQDNGC 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ P+ QRH TSK+ D D NI T GFRGEAL SI V+H+T+ S+ + G Sbjct: 66 GIRRDDFPVVCQRHATSKLEDFTDLLNISTLGFRGEALSSICCVAHVTVTSKTLDSVVGY 125 Query: 120 QIAISGEKISSVRPVAM-NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + +GEK++ N GT++ V +LF+ P R +K+ E N I D++ + AI Sbjct: 126 ECRFNGEKMTEPPKALASNQGTVISVENLFYNNPVRQRLMKNSVEEWNRIVDLVAKFAIH 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGY 236 + + F+ N ++ +T G+ E+++ G + + + +G Sbjct: 186 FTSIGFSLKREDRNISELKT-TTQGSTNEKLATCFGSSVAKELIAFDCTEPKLGFKAKGL 244 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 +++ +FIN R V+ + + Y+ +P YP + + +EI P VD Sbjct: 245 ISSTSYS-SKKFTLCLFINNRLVECLALKRGFQALYSNYLPKQCYPFIYISMEISPHLVD 303 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 VN+HP K+ I F N + I I+Q+ K + S S Sbjct: 304 VNLHPTKAEISFMNESDIVENILQAADKTLLAGDKSRS 341 >gi|46203827|ref|ZP_00050925.2| COG0323: DNA mismatch repair enzyme (predicted ATPase) [Magnetospirillum magnetotacticum MS-1] Length = 352 Score = 291 bits (745), Expect = 2e-76, Method: Composition-based stats. Identities = 120/286 (41%), Positives = 181/286 (63%), Gaps = 4/286 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +R+L ++++IAAGE++ERP+ A+KEL+EN++DA + VE I GGG+ ++ D+G Sbjct: 13 PVRRLDPILVDRIAAGEVVERPASAVKELVENAIDAGARSVEVAIEGGGRRLIRVIDDGI 72 Query: 62 GMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM E++ +AV+RH TSKI D D + I + GFRGEALPSIGAVS L + SR Q G Sbjct: 73 GMGPEDLELAVERHATSKIPDNDLTRIGSLGFRGEALPSIGAVSRLVITSRTAQGE-GVS 131 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + VRP + GT +EV +LF PARL FLKS++ E+ ++++IRR+A+A P Sbjct: 132 LTVDSGVKGPVRPAPASRGTRIEVTELFAATPARLKFLKSDRAESAAVSEIIRRLAVAQP 191 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 +V FT + + +S G F R+ V+G DF NAV ++ LQG+ G Sbjct: 192 QVRFTLRSESGSPTVFPAESEPGQAAFLRRLGAVLGPDFPANAVPVDMAREGFALQGHVG 251 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 +PTF+RG A+ + +NGR V+D+ +L +R A+A+T+ R+PV Sbjct: 252 LPTFHRGAASHIHFVVNGRPVRDRLLLGAVRGAFADTMSSDRHPVW 297 >gi|50307053|ref|XP_453504.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642638|emb|CAH00600.1| KLLA0D09955p [Kluyveromyces lactis] Length = 724 Score = 291 bits (744), Expect = 3e-76, Method: Composition-based stats. Identities = 120/385 (31%), Positives = 192/385 (49%), Gaps = 14/385 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEI+ P A+KE++ENS+DA+++ V+ ++ GG QITDNG Sbjct: 4 RIKPLDVSVVNKIAAGEIVIAPVNALKEMMENSIDAKATMVDILVKDGGIKLLQITDNGC 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P+ +R TSK+ +D S I TFGFRGEAL SI ++ +T+ ++ ++ Sbjct: 64 GIDKDDLPILCERFTTSKLEVFEDLSKIETFGFRGEALASISHIARVTVTTKTEKDQCAW 123 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + S KI +PVA GTI+ V DLF+ IP+RL L+S E N I DVI R +I Sbjct: 124 KASFSEGKILGQPKPVAGKTGTIITVEDLFYNIPSRLKALRSPGEEFNKILDVIGRYSIN 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE-------I 231 V F+ ++ + ++ +R+ V G + N +ELN + + Sbjct: 184 NNNVGFSCKKFGDSKVALMIKADLST-KDRVRIVFGANVSTNLMELNIDITDDVQRNGLL 242 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 + G+ F FINGR V + + Y+ +P G P + L I Sbjct: 243 SASGFVTNLDFTNKKPIPPAFFINGRLVSCDPMRRSFYQIYSNFLPKGNKPFIYFSLTIK 302 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 P+ VDVN+HP K +RF N I + + +Q + S + K S + Sbjct: 303 PQNVDVNIHPTKREVRFLNEEEIIDRLAILLQDKLASIDTSRT---FKTASSVSNPYQVQ 359 Query: 352 KTHLPKYATSLTNTQEKLFLQENRL 376 + +T K+ QEN+L Sbjct: 360 LIGSSNESQDSPSTNLKMKRQENKL 384 >gi|126238204|gb|ABO07413.1| MLH1 [Solanum lycopersicum] Length = 730 Score = 291 bits (744), Expect = 3e-76, Method: Composition-based stats. Identities = 103/401 (25%), Positives = 180/401 (44%), Gaps = 10/401 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L E ++N+IAAGE+I+RP A+KELIENSLDA+S+ + V+ GG Q++D+G Sbjct: 16 KIQRLEECVVNRIAAGEVIQRPVSAVKELIENSLDADSTSISVVVKDGGLKLIQVSDDGH 75 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +R+ TSK+S +D +I + GFRGEAL S+ V H+T+ + G Sbjct: 76 GIRYEDLPILCERYTTSKLSKFEDLQSIRSMGFRGEALASMTYVGHVTVTTITMGQLHGY 135 Query: 120 Q-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + G + + A GT + + +LF+ + AR L++ + I D+I R I Sbjct: 136 RATYRDGLMVDEPKACAAVKGTQIMIENLFYNMAARRKTLQNSADDYPKIVDIISRFGIH 195 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN-----EITL 233 + VSF+ + R ++ +T+ + I V G + + + + Sbjct: 196 HTHVSFSCRKHGAGRADVHTIATSSRL-DAIRSVYGASVARDLMNIEVSDTGPLISVFKM 254 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G+ + +FIN R + + I Y T+P P + + + + P Sbjct: 255 DGFISNSNY-IAKKTTMVLFINDRLIDCGALKRAIEIVYTATLPKASKPFIYMSIILPPE 313 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 VDVN+HP K + F N + I + + S + +SS T Sbjct: 314 HVDVNIHPTKREVSFLNQEFVIEKIQSVVGSKLRSSNESRTFQEQTMDLSSSGPMGQDST 373 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 + + ++ + L + L + N Sbjct: 374 KESSPSGIKSQKVPHKMVRTDTLDPSGRLHAYMQMKPPGNS 414 >gi|294660048|ref|XP_462501.2| DEHA2G22022p [Debaryomyces hansenii CBS767] gi|199434432|emb|CAG91011.2| DEHA2G22022p [Debaryomyces hansenii] Length = 797 Score = 290 bits (742), Expect = 5e-76, Method: Composition-based stats. Identities = 123/417 (29%), Positives = 198/417 (47%), Gaps = 30/417 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L ++N+IAAGEII +P+ A+KEL+ENS+DA+S+ ++ +I GG QI+DNG Sbjct: 44 KIKHLDTSVVNRIAAGEIIIQPANALKELLENSIDAKSTMIDILIKDGGLKLLQISDNGH 103 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+S +D +I T+GFRGEAL SI ++ L+++++ Sbjct: 104 GINKDDMCLLCERFTTSKLSKFEDLESIATYGFRGEALASISHIARLSVITKTKSTQLAH 163 Query: 120 QIAISGEKISS-----------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLI 168 + K+++ +P+A GT + V DLF+ +P+RL LKS+ E + I Sbjct: 164 KAYYLNGKLTNANFKADVPNVEPKPIAGKDGTQIIVEDLFYNVPSRLKTLKSKNDEFSKI 223 Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV------ 222 DVI R A+ V F+ + + + T ERI V G N + Sbjct: 224 LDVIGRYAVHTEGVGFSCKKFGESYQVLVTRPTM-TLTERIRTVFGPAVANELIDVEIKG 282 Query: 223 ------ELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 + K + + G +N Q FIN R V + + I + Y + Sbjct: 283 NETVEEDYQGKYGLVRVSGAITNSNYNNKKKIQPVFFINHRLVTCEPLKRAISSIYQFFL 342 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS---- 332 P G P + L LEI+P+ +DVNVHP K +RF I I + + ++ S Sbjct: 343 PKGTQPFMYLSLEIEPQNLDVNVHPTKREVRFLYEDEIIEIISSKVHQLLSSIDSSRKFK 402 Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 T ++LS + D ++ K + QEN+L D S T+ Sbjct: 403 TQNILSNRQDLKRSNDEFSGLPREHTLNQSSSQPAKKYRQENKLVRVDAQQSKLNTF 459 >gi|320586224|gb|EFW98903.1| DNA mismatch repair protein [Grosmannia clavigera kw1407] Length = 695 Score = 290 bits (741), Expect = 6e-76, Method: Composition-based stats. Identities = 136/555 (24%), Positives = 224/555 (40%), Gaps = 36/555 (6%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTS 65 L ++N+IAAGEII P A+KEL+EN++DA S+ +E ++ GG QITDNG G+ Sbjct: 5 LDPDVVNKIAAGEIIIAPVHALKELVENAVDAGSTMLEVLVKDGGLKLLQITDNGCGIDK 64 Query: 66 EEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAI 123 ++P+ +R TSK+ DD +I T+GFRGEAL SI ++HLT+ +R + + + Sbjct: 65 GDLPILCERFTTSKLQTFDDLGSIATYGFRGEALASISHIAHLTVTTRTRDDVSAWRACY 124 Query: 124 SGEKISSVRP--------VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 +++ +P VA GT + V DLF+ +P R +S E N I D++ R Sbjct: 125 EAGRLAPPKPGQDAEPKRVAGRQGTQIAVEDLFYNVPTRRRAFRSAADEHNKIVDMLGRY 184 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVELNEKSNEITL 233 A+ V+F+ + + +RI V G A++ + Sbjct: 185 AVHCAGVAFSCKKHGESSASI-AVPAVATTVDRIRHVYGGAMAAELLALDTADVRWGFRA 243 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 +G + +FIN R V+ I + YA +P +P V L L+IDP+ Sbjct: 244 RGQASSANHS-LKRTTLLLFINNRCVESANIRKALDDLYATFLPRHGHPFVYLSLDIDPQ 302 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS----TSSVLSKKMISSFHQDN 349 +VDVNVHP K + F N I + I + S T ++L ++ + Sbjct: 303 RVDVNVHPTKREVHFLNEDEITRAVCDHIASKLADVDTSRTFATQTLLPTRLPAPSPALA 362 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 KT Y +L T L + + + P +E Sbjct: 363 VKKTPARPYENNLVRTDSNLRKITSMFTPTSPMTVSCPAAAETAPSDASVHPGRQPAYDV 422 Query: 410 CAQIHQNYIISQTTD--GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 + + + V+ D H + + R + + L + Sbjct: 423 VEREPSVNWLRSVRELKEAVVADAH----GGLTDLFRHYSFVGIVDDRRRLAAIQSGVKL 478 Query: 468 GECALIMEHDEDLHRLGI-KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 E ++LG+ FG IR P + ++ QLLR + + Sbjct: 479 YLLDYGRACFELFYQLGLNDFGNFG----LIRFSPPL----DLAQLLRMALRLAPGNDGH 530 Query: 527 YTLQD---RIENILA 538 D ++ +LA Sbjct: 531 TPSPDDTSAVDAVLA 545 >gi|255716692|ref|XP_002554627.1| KLTH0F09724p [Lachancea thermotolerans] gi|238936010|emb|CAR24190.1| KLTH0F09724p [Lachancea thermotolerans] Length = 729 Score = 290 bits (741), Expect = 7e-76, Method: Composition-based stats. Identities = 122/441 (27%), Positives = 202/441 (45%), Gaps = 13/441 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L+E ++N+IAAGEII P A+KE++ENS+DA ++ ++ +I GG QITDNG Sbjct: 6 KIKPLAESVVNKIAAGEIIVAPVNALKEMMENSIDAGATAIDILIKEGGLKILQITDNGS 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ QR TSK+ +D S+I T+GFRGEAL SI ++ +T+ ++ Sbjct: 66 GIDKSDLPILCQRFTTSKLKTFEDLSSIQTYGFRGEALASISHIARVTVTTKTKNEACAW 125 Query: 120 QIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ S K+ +P+A GTI+ V DLF+ + +RL L+S E I D + R AI Sbjct: 126 RVSYSAGKMIGEPKPIAGRDGTIILVEDLFYNVQSRLRSLRSPGDEFAKILDCVGRYAIN 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL---NEKSNEITLQG 235 V F+ +++ + + + + ER+ V G +N +EL + + G Sbjct: 186 SKNVGFSCKKFGESQFALTVRY-DADVRERVQAVFGRGTASNLIELKVPEIEGLGASASG 244 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 F + FIN R V + + Y+ + G P + L + I P V Sbjct: 245 QVSTLNFINKKSISPIFFINNRLVTCDPLRRALYQTYSSHLAKGNRPFIYLNVTIRPELV 304 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPK 352 DVNVHP K +RF + I I + ++ S S + + + S ++ Sbjct: 305 DVNVHPTKREVRFLHDEEIIEQIASQLGDVLSNCDTSRSFKTTSIFTQKPVSIRENLGKP 364 Query: 353 THLPKYATSLTNTQEKLFLQEN---RLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIA 409 +T K+ QEN R+ + ++ +E + E+S Sbjct: 365 HSQLINNIPVTPLGNKVKRQENKLVRIDASQTKITNYLRSAEYTENTEQSTPYKQSYEDD 424 Query: 410 CAQIHQNYIISQTTDGLVIVD 430 Q + G I D Sbjct: 425 SIQSSCRASEGRQHQGSWIAD 445 >gi|257124945|ref|YP_003163059.1| DNA mismatch repair protein MutL [Leptotrichia buccalis C-1013-b] gi|257048884|gb|ACV38068.1| DNA mismatch repair protein MutL [Leptotrichia buccalis C-1013-b] Length = 691 Score = 289 bits (740), Expect = 7e-76, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 184/346 (53%), Gaps = 18/346 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L EK+ N IAAGE++E P+ IKE+IENSLDA+++ ++ + G +++DNG G Sbjct: 4 IKILDEKVSNIIAAGEVVENPASMIKEMIENSLDAKATMIKIEVFKAGTD-VKVSDNGIG 62 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M ++ ++V+RH TSKI + D N++T+GFRGEAL SI AVS LT+ +R + G + Sbjct: 63 MDKDDTLLSVERHATSKIKEKEDVFNLNTYGFRGEALSSIAAVSKLTITTRSENSPVGYK 122 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + V+ N GT +EVRDLF+ PAR FL+ E I D++ + A++ Sbjct: 123 IGCYGGVVRKFEEVSRNVGTEMEVRDLFYNTPARRKFLRKMSTEYGKIRDIVLKEALSNS 182 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+F+ + K ++ I ++ G+ + N + GY G Sbjct: 183 NVAFSLELDGKSTIK----TSGKGIDNTILELFGKSVLRNLKKFEY--------GYLGNV 230 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + + F+N R V+ I + Y + G+YP ++ DP+++DVNVH Sbjct: 231 EILRSSKDFMFTFVNNRYVKSATIERAVIDGYYTKLMKGKYPFAIIFYNTDPKEIDVNVH 290 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMIS 343 P+K I+F N I+ N I +I +++ + L KK I+ Sbjct: 291 PSKKIIKFSNDKIVYNEIKSAIDDFFYYNDRENWQPNIDLIKKNIN 336 Score = 176 bits (445), Expect = 1e-41, Method: Composition-based stats. Identities = 72/314 (22%), Positives = 136/314 (43%), Gaps = 21/314 (6%) Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST------------SSVLSKK 340 ++ N + S + I N NK S+ S+ + + Sbjct: 385 SAINFNKNDRNSEFSDNSENITYNTFSSDKNFVNNKNENSSKLDEIWNKMNKNSNKIVEN 444 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 + +F ++ +T K+ ++ N + D++ + S E Sbjct: 445 NVENFEIEDKFQTKKWKHNSNFKN-----YKNSGEHRNFDIINENTENKSYYKVGTFEKH 499 Query: 401 ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 QI YI+ + + L I DQH HER+++E+++ F + K+ SQ LL P Sbjct: 500 VGKQFHYDILGQIFDTYILVRRDEELEIYDQHIIHERILYEELKDKFYNKKLESQHLLLP 559 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 + + E +I E+ E G + F + I IR +PA + +I + + + Sbjct: 560 LKMGITGIEKNIIFENIEIFRDFGFDVDEFSEDEIVIRAVPAFDFRDSIENVF---LQLL 616 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 +D ++D ENI+ +M+C G++++G+K+ EM ++R + + C HGRP Sbjct: 617 MDLKNEVEIKDLRENIIISMSCKGAVKAGQKLDMFEMQNMVRRIHEVGK-YTCPHGRPII 675 Query: 581 IKLKLSDIEKLFGR 594 +KL +D++K+FGR Sbjct: 676 VKLSKNDLDKMFGR 689 >gi|159463744|ref|XP_001690102.1| mismatch repair protein [Chlamydomonas reinhardtii] gi|158284090|gb|EDP09840.1| mismatch repair protein [Chlamydomonas reinhardtii] Length = 1007 Score = 289 bits (740), Expect = 8e-76, Method: Composition-based stats. Identities = 122/375 (32%), Positives = 181/375 (48%), Gaps = 22/375 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL E ++N+IAAGE+I+RP+ A+KE++ENSLDA S+++ + GG QITDNG G Sbjct: 39 IRKLDENVVNKIAAGEVIQRPASALKEMLENSLDAGSTQISVTVKDGGNKLLQITDNGSG 98 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + RH TSK+S +D I T GFRGEAL SI VSH+ + + G + Sbjct: 99 IRKEDLAILCHRHTTSKLSQFEDLETISTLGFRGEALCSISFVSHMAVTTMARDAQYGFR 158 Query: 121 IAI--SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + S + +PVA PGT + V DLF+ +P R LKS E LI D + R A+ Sbjct: 159 VTYKDSAMEAPGPKPVAAVPGTTITVEDLFYNVPTRRKALKSASEEYGLILDTLGRYAVY 218 Query: 179 Y-PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN------------ 225 P V F+ R ++ + G+ + + V G D + L Sbjct: 219 SAPGVGFSCRRHGDGRPDISTTAA-GSRLDAVRAVYGADVARELLPLALAAGGGTGPEVP 277 Query: 226 -EKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 E I L+G + G +FINGR V+ + + YA +P P + Sbjct: 278 VEGPLGIKLEGLISGANYGSGKKTVLVLFINGRCVECAPLRRALEGVYAALLPKASKPWL 337 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 L L + PRQV+VN+HP K + F + + I +++ + S S ++ Sbjct: 338 FLDLRLPPRQVEVNMHPTKREVGFMHQAEVIEVIRGAVEAKL---LASNDSRTFATGATA 394 Query: 345 FHQDNAPKTHLPKYA 359 Q P LP A Sbjct: 395 TLQTVLPFASLPPPA 409 >gi|241950505|ref|XP_002417975.1| DNA mismatch repair protein (mutL homologue), putative [Candida dubliniensis CD36] gi|223641313|emb|CAX45694.1| DNA mismatch repair protein (mutL homologue), putative [Candida dubliniensis CD36] Length = 595 Score = 289 bits (740), Expect = 8e-76, Method: Composition-based stats. Identities = 122/608 (20%), Positives = 234/608 (38%), Gaps = 45/608 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR+L + ++ QI + I+ ++EL++NS+DA + ++ I S I DNG Sbjct: 3 SIRQLDDSVVTQIRSHTILHSLDSVVRELLQNSVDAGADKITIKIDPVSLS-VYIHDNGP 61 Query: 62 GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 G+T E++ +H TSK TFG++GEAL ++ A+S+LT++S+ ++ ++ Sbjct: 62 GITPEDLEKVTLQHYTSK-----WQAKTFGYKGEALFALKAISNLTIISKADGYSSPFKL 116 Query: 122 AISGEKISSVRPVAMNP-------GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRR 174 K+ GT+V ++F +P R + I + + Sbjct: 117 TNQVAKLYDGYSFGYFQVGDINPHGTVVIAANIFKNMPVRRQTPPKLEAVKVAILQSLIK 176 Query: 175 MAIAYPKVSFTFSTIKSNRYKM--NFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 P V T + +++ ++P + Q+ G + V K+ I Sbjct: 177 K----PSVGLTVLLVNHTTFQLDRLVSIDGSDYPTLLFQLFGIKTKFDPVSARFKN--IR 230 Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 + G G + + Y F+N R V S T +YP + P Sbjct: 231 ISGIIGR---SPISPKHQYFFVNDRPVTLTPQESKRLNELFTTGNY-KYPTFIFRAH-YP 285 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK 352 +Q + + +R + II F+ ++ K K M+S+ + K Sbjct: 286 KQHSHDCYTWNIVLRIVH-KIISKFLEVPQKEPPVKCSTGPMKRSDKYMLSTKAKLGFLK 344 Query: 353 THLPK--YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC 410 + + + + + ++ +L +S + E Sbjct: 345 ENEINGLVDNRMYHVKSTPLPRMPKIVHPELPRCSCTDHSPFTNLSFSREDLAPGRFKVI 404 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 QI + +I+ D +V++DQHA+ ER+ E+ Q+F + L P L E Sbjct: 405 NQIDRKFILLTIADQIVVLDQHASDERIRVEQYLQEFVEQRHPGLRLQNPVTFILHPSET 464 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID-------- 522 L ++ + + GI + I +P +L+K L ++ D Sbjct: 465 VLFDQYAPNFNTFGIHFATQSDR-VVITHLPFLLTKIENDLLKDSLLQHCYDLADHVKRV 523 Query: 523 -------SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 T+Y L I ++ + AC +I G + EM +++ ++ + QC H Sbjct: 524 HIDCNNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMYQIVTKLSQCKLPFQCAH 583 Query: 576 GRPTFIKL 583 GRP+ + + Sbjct: 584 GRPSIVPI 591 >gi|260890992|ref|ZP_05902255.1| DNA mismatch repair protein MutL [Leptotrichia hofstadii F0254] gi|260859019|gb|EEX73519.1| DNA mismatch repair protein MutL [Leptotrichia hofstadii F0254] Length = 691 Score = 289 bits (739), Expect = 1e-75, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 183/346 (52%), Gaps = 18/346 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L EK+ N IAAGE++E P+ IKE+IENSLDA+++ ++ + G +++DNG G Sbjct: 4 IKILDEKVSNIIAAGEVVENPASMIKEMIENSLDAKATMIKIEVFKSGTD-VKVSDNGIG 62 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M ++ ++V+RH TSKI + D N++T+GFRGEAL SI AVS LT+ +R + G + Sbjct: 63 MDKDDTLLSVERHATSKIKEKEDVFNLNTYGFRGEALSSIAAVSKLTITTRSENSPVGYK 122 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + V+ N GT +EVRDLF+ PAR FL+ E I D++ + A++ Sbjct: 123 IGCYGGVVRKFEEVSRNVGTEMEVRDLFYNTPARRKFLRKISTEYGKIRDIVLKEALSNS 182 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+F+ K ++ I ++ G+ + N + GY G Sbjct: 183 NVAFSLELDGKTTIK----TSGKGIDNTILELFGKSVLRNLKKFEY--------GYLGNV 230 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R + + + F+N R V+ I + Y + G+YP ++ DP+++DVNVH Sbjct: 231 EILRSSKDFMFTFVNNRYVKSATIERAVIDGYYTKLMKGKYPFAIIFYNTDPKEIDVNVH 290 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAI---NKKGISTSSVLSKKMIS 343 P+K I+F N I+ N I +I +++ + L KK I+ Sbjct: 291 PSKKIIKFSNDKIVYNEIKSAIDDFFYYNDRENWQPNIDLIKKNIN 336 Score = 177 bits (449), Expect = 5e-42, Method: Composition-based stats. Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 4/249 (1%) Query: 346 HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 + +N K T N+ + + D + + S E Sbjct: 445 NVENFKKKDEYYTKTGDKNSNSENYKNTTEYRNFDTINENTENESHYKVGTFEKHVGKQF 504 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 QI YI+ + + + I DQH HER+++E+++ F + KI SQ LL P + + Sbjct: 505 HYDILGQIFDTYILVRRDNEMEIYDQHIIHERILYEELKDKFYNKKIESQHLLLPLKMGI 564 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 E +I E+ G + F + I IR +PA + NI + + ++D Sbjct: 565 TGIEKNIIFENIAIFRDFGFDIDEFSEDEIVIRAVPAFDFRDNIENVF---LQLLMDLKN 621 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 ++D ENI+ +M+C G++++G+++ EM ++R + + C HGRP +KL Sbjct: 622 EVEIKDLRENIIISMSCKGAVKAGQRLDMFEMQNMVRRIHEVGK-YTCPHGRPIIVKLSR 680 Query: 586 SDIEKLFGR 594 +D++K+FGR Sbjct: 681 NDLDKMFGR 689 >gi|299471543|emb|CBN80029.1| MutL protein homolog 1 [Ectocarpus siliculosus] Length = 1123 Score = 288 bits (738), Expect = 2e-75, Method: Composition-based stats. Identities = 101/361 (27%), Positives = 164/361 (45%), Gaps = 32/361 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KL E ++N+IAAGE+++RP+ A+KEL+ENSLDA S+ + GG QI DNG Sbjct: 10 KILKLDEDVVNRIAAGEVVQRPANAVKELMENSLDAGSTSITVTAKQGGLKLLQIQDNGH 69 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +R TSK+ + D + TFGFRGEAL SI + +T+ S+ P + Sbjct: 70 GIRREDLPIVCERFTTSKLREFGDLRTMSTFGFRGEALASITHTAKVTITSKTPSSQVAY 129 Query: 120 QIAISGEKI--------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S ++ + +P A GT + DLF+ + R KS + I DV Sbjct: 130 KAKYSDGRLVAGGPGQSADPKPCAGVTGTTILAEDLFYNMDTRRRAFKSPGEQYKGILDV 189 Query: 172 IRRMAIAYPKV--SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS- 228 + R A+ + SFT ++ + I G VEL Sbjct: 190 VTRYAVHFGDRGVSFTCKKHGQPSPDLHT-PPRSSCLANIRVAFGPALSRELVELECSQA 248 Query: 229 -----------------NEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTA 271 +G ++ ++ +FIN R V+ I T+ +A Sbjct: 249 EELLDQGADGGEVAPSKFAFKAKGLVSGADYSAKRSDFI-LFINDRLVESPSIKKTVESA 307 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 Y + +P +P V L + + +DVNVHP K + F + + + Q++++ + Sbjct: 308 YKDVLPKNTHPFVYLGITMPSHHLDVNVHPTKREVHFLHQEELLECLRQAVEQKLAGANQ 367 Query: 332 S 332 S Sbjct: 368 S 368 >gi|86161626|gb|ABC86946.1| MLH1 [Saccharomyces cerevisiae] Length = 769 Score = 288 bits (737), Expect = 2e-75, Method: Composition-based stats. Identities = 116/397 (29%), Positives = 197/397 (49%), Gaps = 11/397 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KE++ENS+DA ++ ++ ++ GG QITDNG Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+ +D S I T+GFRGEAL SI V+ +T+ ++ ++ Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + K+ S +PVA GT + V DLFF IP+RL L+S E + I DV+ R AI Sbjct: 124 RVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRALRSHNDEYSKILDVVGRYAIH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN----AVELNEKSNEITLQ 234 + F+ + Y ++ + + +RI V + +N + E N +++ Sbjct: 184 SKDIGFSCKKFGDSNYSLSVKPSY-TVQDRIRTVFNKSVASNLITFHISKVEDLNLESVE 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G F + FIN R V + + + Y+ +P G P + L + IDP Sbjct: 243 GKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNYLPKGNRPFIYLGIVIDPAA 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKT 353 VDVNVHP K +RF + I I + ++ I TS IS+ ++ P Sbjct: 303 VDVNVHPTKREVRFLSQDEIIEKIANQLHAELS--AIDTSRTFKASSISTNKPESLIPFN 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + + + ++ ++ + + N L + Sbjct: 361 DTIESDRNRKSLRQAQVVENSYTTANSQLRKAKRQEN 397 >gi|86161634|gb|ABC86950.1| MLH1 [Saccharomyces cerevisiae] Length = 769 Score = 288 bits (736), Expect = 2e-75, Method: Composition-based stats. Identities = 116/397 (29%), Positives = 195/397 (49%), Gaps = 11/397 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KE++ENS+DA ++ ++ ++ GG QITDNG Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+ +D S I T+GFRGEAL SI V+ +T+ ++ ++ Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + K+ S +PVA GT + V DLFF IP+RL L+S E + I DV+ R AI Sbjct: 124 RVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRALRSHNDEYSKILDVVGRYAIH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN----AVELNEKSNEITLQ 234 + F+ + Y ++ + + +RI V + +N + E N + Sbjct: 184 SKDIGFSCKKFGDSNYSLSVKPSY-TVQDRIRTVFNKSVASNLITFHISKVEDLNLERVD 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G F + FIN R V + + + Y+ +P G P + L + IDP Sbjct: 243 GKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNYLPKGNRPFIYLGIVIDPAA 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKT 353 VDVNVHP K +RF + I I + ++ I TS IS+ ++ P Sbjct: 303 VDVNVHPTKREVRFLSQDEIIEKIANQLHAKLS--AIDTSRTFKASSISTNKPESLIPFN 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + + + ++ ++ + + N L + Sbjct: 361 DTIESDRNRKSLRQAQVVENSYTTANSQLRKAKRQEN 397 >gi|86161622|gb|ABC86944.1| MLH1 [Saccharomyces cerevisiae] Length = 769 Score = 288 bits (736), Expect = 3e-75, Method: Composition-based stats. Identities = 116/397 (29%), Positives = 196/397 (49%), Gaps = 11/397 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KE++ENS+DA ++ ++ ++ GG QITDNG Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+ +D S I T+GFRGEAL SI V+ +T+ ++ ++ Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + K+ S +PVA GT + V DLFF IP+RL L+S E + I DV+ R AI Sbjct: 124 RVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRALRSHNDEYSKILDVVGRYAIH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN----AVELNEKSNEITLQ 234 + F+ + Y ++ + + +RI V + +N + E N ++ Sbjct: 184 SKDIGFSCKKFGDSNYSLSVKPSY-TVQDRIRTVFNKSVASNLITFHISKVEDLNLESVD 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G F + FIN R V + + + Y+ +P G P + L + IDP Sbjct: 243 GKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNYLPKGNRPFIYLGIVIDPAA 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKT 353 VDVNVHP K +RF + I I + ++ I TS IS+ ++ P Sbjct: 303 VDVNVHPTKREVRFLSQDEIIEKIANQLHAELS--AIDTSRTFKASSISTNKPESLIPFN 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + + + ++ ++ + + N L + Sbjct: 361 DTIESDRNRKSLRQAQVVENSYTTANSQLRKAKRQEN 397 >gi|313235516|emb|CBY10971.1| unnamed protein product [Oikopleura dioica] Length = 670 Score = 287 bits (735), Expect = 3e-75, Method: Composition-based stats. Identities = 115/399 (28%), Positives = 195/399 (48%), Gaps = 11/399 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IRKLS+ +IN+IAAGE+++RP+ AIKELIENS+DA + ++ GG F I D+G Sbjct: 1 MPIRKLSQDVINKIAAGEVVQRPANAIKELIENSIDAGAKSIKIKTKKGGLEMFSIEDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++P+A R TSK+ + D +I +FGFRGEAL SI V HLT+ S+P Sbjct: 61 CGIAMEDLPLAGVRFATSKLQEYTDLKDIGSFGFRGEALASISHVGHLTITSKPASQQVA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 +++ G K + P A GT+++V+DLF + R + I DVIR +I Sbjct: 121 YKLSFDGGKANGEAIPSAGKNGTLIQVKDLFHNMNMRQKSY-NPNETFAKIADVIRAYSI 179 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 Y K++F+ I ++ ++ + + I + ++ +N + EI + G Sbjct: 180 HYEKLNFSLFRIDKSQTQVRSWNLP-DRKTIIEKTFSKEVSSNILTSKLTDEEIGVDGEI 238 Query: 238 GIPTFNRGNANQF-YVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 + +FIN R ++ K I I + Y + +P G P V + + + R +D Sbjct: 239 FFTSSVYCGKKFILLIFINNRLIESKQIKQIIESIYEDFLPRGSRPWVYINITMPGRNID 298 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK-THL 355 VNVHP K ++F + I + I + + + I T + + ++ +F ++ L Sbjct: 299 VNVHPTKMEVQFLHDERIYDLIKKKMDMFL----IPTKTDRTMSVVPTFLSNHETSVIDL 354 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 + S + L Q + ++ D + + Sbjct: 355 NESRDSRRSDPPSLDYQHQMVRNDNTSQKIDSFLANIEE 393 >gi|86161610|gb|ABC86938.1| MLH1 [Saccharomyces cerevisiae] gi|86161614|gb|ABC86940.1| MLH1 [Saccharomyces cerevisiae] gi|86161616|gb|ABC86941.1| MLH1 [Saccharomyces cerevisiae] gi|86161630|gb|ABC86948.1| MLH1 [Saccharomyces cerevisiae] gi|207342236|gb|EDZ70057.1| YMR167Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|259148748|emb|CAY81993.1| Mlh1p [Saccharomyces cerevisiae EC1118] Length = 769 Score = 287 bits (735), Expect = 3e-75, Method: Composition-based stats. Identities = 116/397 (29%), Positives = 196/397 (49%), Gaps = 11/397 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KE++ENS+DA ++ ++ ++ GG QITDNG Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+ +D S I T+GFRGEAL SI V+ +T+ ++ ++ Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + K+ S +PVA GT + V DLFF IP+RL L+S E + I DV+ R AI Sbjct: 124 RVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRALRSHNDEYSKILDVVGRYAIH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN----AVELNEKSNEITLQ 234 + F+ + Y ++ + + +RI V + +N + E N ++ Sbjct: 184 SKDIGFSCKKFGDSNYSLSVKPSY-TVQDRIRTVFNKSVASNLITFHISKVEDLNLESVD 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G F + FIN R V + + + Y+ +P G P + L + IDP Sbjct: 243 GKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNYLPKGNRPFIYLGIVIDPAA 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKT 353 VDVNVHP K +RF + I I + ++ I TS IS+ ++ P Sbjct: 303 VDVNVHPTKREVRFLSQDEIIEKIANQLHAELS--AIDTSRTFKASSISTNKPESLIPFN 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + + + ++ ++ + + N L + Sbjct: 361 DTIESDRNRKSLRQAQVVENSYTTANSQLRKAKRQEN 397 >gi|86161628|gb|ABC86947.1| MLH1 [Saccharomyces cerevisiae] Length = 769 Score = 287 bits (735), Expect = 3e-75, Method: Composition-based stats. Identities = 116/386 (30%), Positives = 193/386 (50%), Gaps = 12/386 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KE++ENS+DA ++ ++ ++ GG QITDNG Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+ +D S I T+GFRGEAL SI V+ +T+ ++ ++ Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + K+ S +PVA GT + V DLFF IP+RL L+S E + I DV+ R AI Sbjct: 124 RVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRALRSHNDEYSKILDVVGRYAIH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN----AVELNEKSNEITLQ 234 + F+ + Y ++ + + +RI V + +N + E N +++ Sbjct: 184 SKDIGFSCKKFGDSNYSLSVKPSY-TVQDRIRTVFNKSVASNLITFHISKVEDLNLESVE 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G F + FIN R V + + + Y+ +P G P + L + IDP Sbjct: 243 GKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNYLPKGNRPFIYLGIVIDPAA 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS----TSSVLSKKMISSFHQDNA 350 VDVNVHP K +RF + I I + ++ S SS+ + K S ++ Sbjct: 303 VDVNVHPTKREVRFLSQDEIIEKIANQLHAELSAIDTSRTFKASSISTNKPESLIPFNDT 362 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRL 376 ++ + + T E + N Sbjct: 363 IESDRNRKSLRQTQVVENSYTTANSQ 388 >gi|86161618|gb|ABC86942.1| MLH1 [Saccharomyces cerevisiae] Length = 769 Score = 287 bits (735), Expect = 3e-75, Method: Composition-based stats. Identities = 116/397 (29%), Positives = 196/397 (49%), Gaps = 11/397 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KE++ENS+DA ++ ++ ++ GG QITDNG Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+ +D S I T+GFRGEAL SI V+ +T+ ++ ++ Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + K+ S +PVA GT + V DLFF IP+RL L+S E + I DV+ R AI Sbjct: 124 RVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRALRSHNDEYSKILDVVGRYAIH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN----AVELNEKSNEITLQ 234 + F+ + Y ++ + + +RI V + +N + E N ++ Sbjct: 184 SKDIGFSCKKFGDSNYSLSVKPSY-TVQDRIRTVFNKSVASNLITFHISKVEDLNLESVD 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G F + FIN R V + + + Y+ +P G P + L + IDP Sbjct: 243 GKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNYLPKGNRPFIYLGIVIDPAA 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKT 353 VDVNVHP K +RF + I I + ++ I TS IS+ ++ P Sbjct: 303 VDVNVHPTKREVRFLSQDEIIEKIANQLHAELS--AIDTSRTFKASSISTNKPESLIPFN 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + + + ++ ++ + + N L + Sbjct: 361 DTIESDRNRKSLRQAQVVENSYTTANSQLRKAKRQEN 397 >gi|21672810|ref|NP_660877.1| DNA mismatch repair protein MutL [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25008819|sp|Q8K913|MUTL_BUCAP RecName: Full=DNA mismatch repair protein mutL gi|21623461|gb|AAM68088.1| DNA mismatch repair protein MutL [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 582 Score = 287 bits (735), Expect = 3e-75, Method: Composition-based stats. Identities = 137/506 (27%), Positives = 242/506 (47%), Gaps = 17/506 (3%) Query: 13 QIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAV 72 QI+AGE+IERPS IKEL+ENS+DA++ ++ + G + + D+GFG+ +++ +A+ Sbjct: 14 QISAGEVIERPSSVIKELLENSIDAQAKNIDISVERSGLNSITVKDDGFGIEKDQLLLAI 73 Query: 73 QRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGE-KIS 129 RH TSKI+ D NI+TFGFRGEAL SI AVS + L+S +N I G + Sbjct: 74 SRHATSKINRLSDLDNINTFGFRGEALASIRAVSRMKLISCSQNSNIAWSIYSEGFSNHT 133 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 ++P+A GT + V +LF+ IP RL F+K+E+ E I + I+++A++ ++ F Sbjct: 134 LLQPIAHPIGTSIIVDNLFYNIPVRLKFIKNERSEFLKIDETIKKIALSNFGINIFFKKD 193 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP-TFNRGNAN 248 K + N N R+ V + +N +E+ EK + ITL G+ P + + Sbjct: 194 KKLFVSYKAITKNNNKIHRLKTVFNQIDLNYVLEIKEKMHNITLFGWLIFPSSLSSTFKK 253 Query: 249 QFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRF 308 Y ++N R V + I S + ++ E I R +L L + ++D+N+HP K+ I+F Sbjct: 254 IQYCYVNNRFVYNNLIKSAVFNSFYEIIGNKRSTSFILYLTLPSNEIDINIHPTKNEIKF 313 Query: 309 RNPTIIRNFIIQSIQKAINKKGIS-TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQE 367 II F+ QSI ++ K I S+ K S+ ++N + K + + + E Sbjct: 314 HKSNIIYFFVYQSILSSLKKCKIKYISNNFFLKTHSNKCKNNNSDSLNTKLVSQIHSKYE 373 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLV 427 K L ++ +ST+ + E + G + Y + ++ Sbjct: 374 KKDLYKDVISTDLFKINSQRFLKE----------YFFSFGKLLIVFQKYYGLMYYSNTFS 423 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 ++ A + + K+R + I + + + + ++ + + L + G Sbjct: 424 LISFPLAKKIVEQYKLRSAIKNNMIP-EIFSYNFLYFITFKQNKILSNNLKLLLKFGFNL 482 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLL 513 ++ IP L +N+ LL Sbjct: 483 -ILKEKYFFLKTIPIFLKNQNLDVLL 507 >gi|86161624|gb|ABC86945.1| MLH1 [Saccharomyces cerevisiae] Length = 769 Score = 287 bits (735), Expect = 3e-75, Method: Composition-based stats. Identities = 116/397 (29%), Positives = 196/397 (49%), Gaps = 11/397 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KE++ENS+DA ++ ++ ++ GG QITDNG Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+ +D S I T+GFRGEAL SI V+ +T+ ++ ++ Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + K+ S +PVA GT + V DLFF IP+RL L+S E + I DV+ R AI Sbjct: 124 RVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRALRSHNDEYSKILDVVGRYAIH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN----AVELNEKSNEITLQ 234 + F+ + Y ++ + + +RI V + +N + E N ++ Sbjct: 184 SKDIGFSCKKFGDSNYSLSVKPSY-TVQDRIRTVFNKSVASNLITFHISKVEDLNLESVD 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G F + FIN R V + + + Y+ +P G P + L + IDP Sbjct: 243 GKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNYLPKGNRPFIYLGIVIDPAA 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKT 353 VDVNVHP K +RF + I I + ++ I TS IS+ ++ P Sbjct: 303 VDVNVHPTKREVRFLSQDEIIEKIANQLHAELS--AIDTSRTFKASSISTNKPESLIPFN 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + + + ++ ++ + + N L + Sbjct: 361 DTIESDRNRKSLRQAQVVENSYTTANSQLRKAKRQEN 397 >gi|86161620|gb|ABC86943.1| MLH1 [Saccharomyces cerevisiae] gi|151945868|gb|EDN64100.1| MutL-like protein [Saccharomyces cerevisiae YJM789] Length = 769 Score = 287 bits (734), Expect = 4e-75, Method: Composition-based stats. Identities = 116/397 (29%), Positives = 196/397 (49%), Gaps = 11/397 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KE++ENS+DA ++ ++ ++ GG QITDNG Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+ +D S I T+GFRGEAL SI V+ +T+ ++ ++ Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + K+ S +PVA GT + V DLFF IP+RL L+S E + I DV+ R AI Sbjct: 124 RVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRALRSHNDEYSKILDVVGRYAIH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN----AVELNEKSNEITLQ 234 + F+ + Y ++ + + +RI V + +N + E N ++ Sbjct: 184 SKDIGFSCKKFGDSNYSLSVKPSY-TVQDRIRTVFNKSVASNLITFHISKVEDLNLESVD 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G F + FIN R V + + + Y+ +P G P + L + IDP Sbjct: 243 GKVCNLNFISKKSISPIFFINNRLVTCDLLRRALNSVYSNYLPKGNRPFIYLGIVIDPAA 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKT 353 VDVNVHP K +RF + I I + ++ I TS IS+ ++ P Sbjct: 303 VDVNVHPTKREVRFLSQDEIIEKIANQLHAELS--AIDTSRTFKASSISTNKPESLIPFN 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + + + ++ ++ + + N L + Sbjct: 361 DTIESDRNRKSLRQAQVVENSYTTANSQLRKAKRQEN 397 >gi|323303530|gb|EGA57323.1| Mlh1p [Saccharomyces cerevisiae FostersB] Length = 769 Score = 287 bits (734), Expect = 4e-75, Method: Composition-based stats. Identities = 116/397 (29%), Positives = 196/397 (49%), Gaps = 11/397 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KE++ENS+DA ++ ++ ++ GG QITDNG Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+ +D S I T+GFRGEAL SI V+ +T+ ++ ++ Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + K+ S +PVA GT + V DLFF IP+RL L+S E + I DV+ R AI Sbjct: 124 RVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRALRSHNDEYSKILDVVGRYAIH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN----AVELNEKSNEITLQ 234 + F+ + Y ++ + + +RI V + +N + E N ++ Sbjct: 184 SKDIGFSCKKFGDSNYSLSVKPSY-TVQDRIRTVFNKSVASNLITFHISKVEDLNLESVD 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G F + FIN R V + + + Y+ +P G P + L + IDP Sbjct: 243 GKVCNLNFISKKSISPIFFINNRLVTCDXLRRALNSVYSNYLPKGNRPFIYLGIVIDPAA 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKT 353 VDVNVHP K +RF + I I + ++ I TS IS+ ++ P Sbjct: 303 VDVNVHPTKREVRFLSQDEIIEKIANQLHAELS--AIDTSRTFKASSISTNKPESLIPFN 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + + + ++ ++ + + N L + Sbjct: 361 DTIESDRNRKSLRQAQVVENSYTTANSQLRKAKRQEN 397 >gi|6323819|ref|NP_013890.1| Mlh1p [Saccharomyces cerevisiae S288c] gi|1709056|sp|P38920|MLH1_YEAST RecName: Full=DNA mismatch repair protein MLH1; AltName: Full=MutL protein homolog 1; AltName: Full=Post meiotic segregation protein 2 gi|825572|emb|CAA89803.1| Mlh1p [Saccharomyces cerevisiae] gi|86161632|gb|ABC86949.1| MLH1 [Saccharomyces cerevisiae] gi|256270468|gb|EEU05661.1| Mlh1p [Saccharomyces cerevisiae JAY291] gi|285814168|tpg|DAA10063.1| TPA: Mlh1p [Saccharomyces cerevisiae S288c] Length = 769 Score = 286 bits (733), Expect = 5e-75, Method: Composition-based stats. Identities = 116/397 (29%), Positives = 196/397 (49%), Gaps = 11/397 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KE++ENS+DA ++ ++ ++ GG QITDNG Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+ +D S I T+GFRGEAL SI V+ +T+ ++ ++ Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + K+ S +PVA GT + V DLFF IP+RL L+S E + I DV+ R AI Sbjct: 124 RVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRALRSHNDEYSKILDVVGRYAIH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN----AVELNEKSNEITLQ 234 + F+ + Y ++ + + +RI V + +N + E N ++ Sbjct: 184 SKDIGFSCKKFGDSNYSLSVKPSY-TVQDRIRTVFNKSVASNLITFHISKVEDLNLESVD 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G F + FIN R V + + + Y+ +P G P + L + IDP Sbjct: 243 GKVCNLNFISKKSISPIFFINNRLVTCDLLRRALNSVYSNYLPKGNRPFIYLGIVIDPAA 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKT 353 VDVNVHP K +RF + I I + ++ I TS IS+ ++ P Sbjct: 303 VDVNVHPTKREVRFLSQDEIIEKIANQLHAELS--AIDTSRTFKASSISTNKPESLIPFN 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + + + ++ ++ + + N L + Sbjct: 361 DTIESDRNRKSLRQAQVVENSYTTANSQLRKAKRQEN 397 >gi|460627|gb|AAA16835.1| Mlh1p [Saccharomyces cerevisiae] Length = 769 Score = 286 bits (733), Expect = 5e-75, Method: Composition-based stats. Identities = 116/397 (29%), Positives = 196/397 (49%), Gaps = 11/397 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KE++ENS+DA ++ ++ ++ GG QITDNG Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+ +D S I T+GFRGEAL SI V+ +T+ ++ ++ Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + K+ S +PVA GT + V DLFF IP+RL L+S E + I DV+ R AI Sbjct: 124 RVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRALRSHNDEYSKILDVVGRYAIH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN----AVELNEKSNEITLQ 234 + F+ + Y ++ + + +RI V + +N + E N ++ Sbjct: 184 SKDIGFSCKKFGDSNYSLSVKPSY-TVQDRIRTVFNKSVASNLITFHISKVEDLNLESVD 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G F + FIN R V + + + Y+ +P G P + L + IDP Sbjct: 243 GKVCNLNFISKKSISLIFFINNRLVTCDLLRRALNSVYSNYLPKGFRPFIYLGIVIDPAA 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKT 353 VDVNVHP K +RF + I I + ++ I TS IS+ ++ P Sbjct: 303 VDVNVHPTKREVRFLSQDEIIEKIANQLHAELS--AIDTSRTFKASSISTNKPESLIPFN 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + + + ++ ++ + + N L + Sbjct: 361 DTIESDRNRKSLRQAQVVENSYTTANSQLRKAKRQEN 397 >gi|86161608|gb|ABC86937.1| MLH1 [Saccharomyces cerevisiae] Length = 769 Score = 286 bits (733), Expect = 5e-75, Method: Composition-based stats. Identities = 116/397 (29%), Positives = 196/397 (49%), Gaps = 11/397 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KE++ENS+DA ++ ++ ++ GG QITDNG Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+ +D S I T+GFRGEAL SI V+ +T+ ++ ++ Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + K+ S +PVA GT + V DLFF IP+RL L+S E + I DV+ R AI Sbjct: 124 RVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRALRSHNDEYSKILDVVGRYAIH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN----AVELNEKSNEITLQ 234 + F+ + Y ++ + + +RI V + +N + E N ++ Sbjct: 184 SKDIGFSCKKFGDSNYSLSVKPSY-TVQDRIRTVFNKSVASNLITFHISKVEDLNLESVD 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G F + FIN R V + + + Y+ +P G P + L + IDP Sbjct: 243 GKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNYLPKGNRPFIYLGIVIDPAA 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKT 353 VDVNVHP K +RF + I I + ++ I TS IS+ ++ P Sbjct: 303 VDVNVHPTKREVRFLSQDDIIEKIANQLHAELS--AIDTSRTFKASSISTNKPESLIPFN 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + + + ++ ++ + + N L + Sbjct: 361 DTIESDRNRKSLRQAQVVENSYTTANSQLRKAKRQEN 397 >gi|261330774|emb|CBH13759.1| mismatch repair protein MLH1, putative [Trypanosoma brucei gambiense DAL972] Length = 887 Score = 286 bits (733), Expect = 6e-75, Method: Composition-based stats. Identities = 107/400 (26%), Positives = 179/400 (44%), Gaps = 36/400 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M+ I +L E +IN+IAAGE+++RPS A+KEL+ENSLDA S+ ++ V+ GG Q+TD+ Sbjct: 1 MRGIERLPEDVINRIAAGEVVQRPSAALKELLENSLDAGSTCIQVVVQDGGLELLQVTDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++P+ +R+ TSK+ D+ +NI +FGFRGEAL SI V+ +T+ + + Sbjct: 61 GHGIRFGDLPLLCERYATSKLRAFDELNNIRSFGFRGEALCSISYVARVTVTTMRHNDTV 120 Query: 118 GAQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 + ++ +P A NPGT + +F+ R E + + DV+ R A Sbjct: 121 AWRCHYVDGRMQEEPKPCAGNPGTCIRAEKMFYNAAVRRRAFSRPSEECSRVEDVVSRYA 180 Query: 177 IAYPKVSFTFSTIKSNR----YKMNFQSTNGNFPERISQVIGEDFINNAVELNEK----- 227 +A+P V+F+ + + N I Q G + + E+ Sbjct: 181 LAFPGVAFSCRRSDGSVAGVTKNCVCFPKDSNTLANIRQHWGGEVASRLCEVRCTGESPS 240 Query: 228 -----------------SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRT 270 + GYT T + VF+N R V I + Sbjct: 241 EDNCTPESVLATSGPSGEGRFLITGYTSDITLA-SRKSYLCVFVNNRLVDSTAIRRALDA 299 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 Y+ + G P VL + + P +VDVN+HP K + + II + + + +Q A+ Sbjct: 300 VYSGVLVRGNRPFTVLFVTVPPDRVDVNIHPTKHEVCLLDEEIIVSQLSECVQGALQASA 359 Query: 331 ISTSSVLSKK-----MISSFHQDNAPKTHLPKYATSLTNT 365 + + M+ + + P +TS N Sbjct: 360 ARRQMDIRQIHSKAVMLGDRESQRSNQPMQPHSSTSPFNP 399 >gi|157169422|ref|XP_001651509.1| DNA mismatch repair protein mlh1 [Aedes aegypti] gi|108878401|gb|EAT42626.1| DNA mismatch repair protein mlh1 [Aedes aegypti] Length = 661 Score = 286 bits (732), Expect = 7e-75, Method: Composition-based stats. Identities = 141/551 (25%), Positives = 235/551 (42%), Gaps = 28/551 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I KL E ++N+IAAGEII+RP+ A+KE+IENSLDA+S+ ++ VI GG QI DNG G Sbjct: 6 ICKLDEVVVNRIAAGEIIQRPANALKEMIENSLDAKSTSIQIVIKYGGLKSLQIQDNGTG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ + +R TSK+ +D S+I T+GFRGEAL SI V+HL + ++ + Sbjct: 66 IRRDDLAIVCERFTTSKLQKFEDLSSIETYGFRGEALASISHVAHLIITTKTKDEKCAFK 125 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 K+ ++P A N GT + V DLF+ +P R LK+ E I+DV+ + A+ Sbjct: 126 ATYEDGKLKGDIKPCAGNQGTQITVEDLFYNVPMRKQALKAPNEEFQKISDVVSKYAVHN 185 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ--GYT 237 P+ F N I+ + G + +++ + + LQ G+ Sbjct: 186 PQTGFMLKKFGENAT--IRTQAKSTVETNIAMIYGSSISKSLLKIAIDDDILQLQVNGFV 243 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 FN F +FIN R V I I Y+ +P G P V L +E++P VDV Sbjct: 244 TNVNFN-LKKGMFLLFINHRAVDSTNIKKAIDQIYSLYLPKGSAPFVYLSIELNPNNVDV 302 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 NVHP K + F + I I +++++ + G + S + + + A + L Sbjct: 303 NVHPTKHEVHFLHEEEIIEKIKEAVERVL--LGGNASRTFYTQALLPGAPEPAEVSKL-- 358 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 T + KL + R S ND + + + + + Sbjct: 359 --NDSTGDKPKLDYKFVRTSHNDQKLDKFFGINLSRNASMNESTNNNEDLGGPLLTPKRE 416 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 ++ T +++ E +R + +I + Sbjct: 417 KPTKETKLTSVLNLRKTVEDTCDRNLRTIISELAFVGVIDRHRVLIQYDTKMFLVATRVL 476 Query: 478 -EDL--HRLGIKAERFG----PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 E+L L E N + +RE+ ++L+ ++ + D L Sbjct: 477 FEELCYQMLLFNFENLDSMAFTNPLPLREL-SMLALQDAESGWTE------DDGPEEELA 529 Query: 531 DRIENILATMA 541 +RI IL + A Sbjct: 530 ERIVEILISKA 540 >gi|325182796|emb|CCA17251.1| mismatch repair endonuclease pms1 putative [Albugo laibachii Nc14] Length = 667 Score = 286 bits (732), Expect = 7e-75, Method: Composition-based stats. Identities = 130/665 (19%), Positives = 255/665 (38%), Gaps = 95/665 (14%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L + +I +G+ I IA+KELIEN+LDA ++++E GK+ ++ DNG G+ Sbjct: 6 QALDVGDVQRICSGQSIPDAPIALKELIENALDACATQIEIRFVEHGKNAIEVVDNGSGI 65 Query: 64 TSEEIPMAVQRHCTSKIS--DDFSNIHTFGFR----------------GEALPSIGAVS- 104 E V+++ TSKI+ +D + +FGFR GEAL S+ + Sbjct: 66 PIENHSTLVKKNHTSKIAAFEDIETVSSFGFRYVLSPFLKLAITRENSGEALSSLCHSAL 125 Query: 105 HLTLMSRPPQNNTGAQIAISGEKISSVRPVAMN-PGTIVEVRDLFFTIPAR-LNFLKSEQ 162 LT+ ++ Q++ G + + GT V +P R +F ++ + Sbjct: 126 ELTICTKTTQDSIGTLLKYDASGNLIEKSAKARGIGTSVT------PLPVRCRDFHRNIK 179 Query: 163 VETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPER-------ISQVIGE 215 + VI A+ V F S R ++ + + +R I+ V G Sbjct: 180 KYYSKSLKVIHTYALISLNVKFIVSNRTGTRQQIVLSTESSARRDRLEAMKISIASVFGL 239 Query: 216 DFINNAVELNEKSNEITL---QGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRT 270 F + G+ G + ++ +++INGR V + I Sbjct: 240 KFFKTLIPFQMDETSTHGRSAYGFISQIGIGAGKSDNDRQFIYINGRPVDAPKLNKAIHQ 299 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI---- 326 + + + +Y V+ ++ + +D+NV P K + FR + + + + Sbjct: 300 VWRQF-EVRQYANYVIDFQVPSQDLDLNVTPDKRTVFFRKENEMMESLQTQLLQIFEPAK 358 Query: 327 -----------NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQ--------- 366 + +T++ + K I ++ P + P + + Sbjct: 359 RIFTVQPLTEEKRSTPNTTTPIPLKAILRSPEEVRPTSVTPNDFETEIRPRKRAKIGTIE 418 Query: 367 --EKLFLQE----------NRLSTNDLLPSDDPTYSEDNDPVEES----------EATHY 404 EK++ E S P+EE+ + + Sbjct: 419 ALEKVYTSEIVTGWTLSALRETRKRYFKEVALGKVSGREKPLEEASIDALLHRVFQKQDF 478 Query: 405 QLGIACAQIHQNYIISQTTD-GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 Q Q + +II++ L I+DQHA+ E+ +E +++ Q L+ P+ + Sbjct: 479 QSMEIIGQFNLGFIIAKYNTKDLFIIDQHASDEKFRYESLQRTTI---FHHQPLVHPQSL 535 Query: 464 DLLEGECALIMEHDEDLHRLGIKAE---RFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 L E +I++H + + G E + N + + +P + + L +++ + Sbjct: 536 SLSSTEEMIILDHLQVFRKNGFTFEVDAQAQSNKLRLLSLPLSKETQFGVKDLFELVSLL 595 Query: 521 IDSST--TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + ++ +ILA+ AC S+ G + EM R++ ++ C HGRP Sbjct: 596 QEYPSNVESLRLSKVASILASRACRSSVMIGTALSKAEMTRIVHQLTGLDQPWNCPHGRP 655 Query: 579 TFIKL 583 T L Sbjct: 656 TMRHL 660 >gi|72393427|ref|XP_847514.1| mismatch repair protein MLH1 [Trypanosoma brucei TREU927] gi|62359612|gb|AAX80045.1| mismatch repair protein MLH1 [Trypanosoma brucei] gi|70803544|gb|AAZ13448.1| mismatch repair protein MLH1 [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 887 Score = 286 bits (731), Expect = 1e-74, Method: Composition-based stats. Identities = 107/400 (26%), Positives = 179/400 (44%), Gaps = 36/400 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M+ I +L E +IN+IAAGE+++RPS A+KEL+ENSLDA S+ ++ V+ GG Q+TD+ Sbjct: 1 MRGIERLPEDVINRIAAGEVVQRPSAALKELLENSLDAGSTCIQVVVQDGGLELLQVTDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++P+ +R+ TSK+ D+ +NI +FGFRGEAL SI V+ +T+ + + Sbjct: 61 GHGIRFGDLPLLCERYATSKLRAFDELNNIRSFGFRGEALCSISYVARVTVTTMRHNDTV 120 Query: 118 GAQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 + ++ +P A NPGT + +F+ R E + + DV+ R A Sbjct: 121 AWRCHYVDGRMQEEPKPCAGNPGTCIRAEKMFYNAAVRRRAFSRPSEECSRVEDVVSRYA 180 Query: 177 IAYPKVSFTFSTIKSNR----YKMNFQSTNGNFPERISQVIGEDFINNAVELNEK----- 227 +A+P V+F+ + + N I Q G + + E+ Sbjct: 181 LAFPSVAFSCRRSDGSVAGVTKNCVCFPKDSNTLANIRQHWGGEVASRLCEVRCTGESPS 240 Query: 228 -----------------SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRT 270 + GYT T + VF+N R V I + Sbjct: 241 EDNCTPESVLATSGPSGEGRFLITGYTSDITLA-SRKSYLCVFVNNRLVDSTAIRRALDA 299 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 Y+ + G P VL + + P +VDVN+HP K + + II + + + +Q A+ Sbjct: 300 VYSGVLVRGNRPFTVLFVTVPPDRVDVNIHPTKHEVCLLDEEIIVSQLSECVQGALQASA 359 Query: 331 ISTSSVLSKK-----MISSFHQDNAPKTHLPKYATSLTNT 365 + + M+ + + P +TS N Sbjct: 360 ARRQMDIRQIHSKAVMLGDRESQRSNQPMQPHSSTSPFNP 399 >gi|13517948|gb|AAK29067.1|AF346620_1 MLH1 [Trypanosoma brucei] Length = 887 Score = 286 bits (731), Expect = 1e-74, Method: Composition-based stats. Identities = 107/400 (26%), Positives = 179/400 (44%), Gaps = 36/400 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M+ I +L E +IN+IAAGE+++RPS A+KEL+ENSLDA S+ ++ V+ GG Q+TD+ Sbjct: 1 MRGIERLPEDVINRIAAGEVVQRPSAALKELLENSLDAGSTCIQVVVQDGGLELLQVTDD 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ ++P+ +R+ TSK+ D+ +NI +FGFRGEAL SI V+ +T+ + + Sbjct: 61 GHGIRFGDLPLLCERYATSKLRAFDELNNIRSFGFRGEALCSISYVARVTVTTMRHNDTV 120 Query: 118 GAQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 + ++ +P A NPGT + +F+ R E + + DV+ R A Sbjct: 121 AWRCHYVDGRMQEEPKPCAGNPGTCIRAEKMFYNAAVRRRAFSRPSEECSRVEDVVSRYA 180 Query: 177 IAYPKVSFTFSTIKSNR----YKMNFQSTNGNFPERISQVIGEDFINNAVELNEK----- 227 +A+P V+F+ + + N I Q G + + E+ Sbjct: 181 LAFPSVAFSCRRSDGSVAGVTKNCVCFPKDSNTLANIRQHWGGEVASRLCEVRCTGESPS 240 Query: 228 -----------------SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRT 270 + GYT T + VF+N R V I + Sbjct: 241 EDNCTPESVLATSGPSGEGRFLITGYTSDITLA-SRKSYLCVFVNNRLVDSTAIRRALDA 299 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 Y+ + G P VL + + P +VDVN+HP K + + II + + + +Q A+ Sbjct: 300 VYSGVLVRGNRPFTVLFVTVPPDRVDVNIHPTKHEVCLLDEEIIVSQLSECVQGALQASA 359 Query: 331 ISTSSVLSKK-----MISSFHQDNAPKTHLPKYATSLTNT 365 + + M+ + + P +TS N Sbjct: 360 ARRQMDIRQIHSKAVMLGDRESQRSNQPMQPHSSTSPFNP 399 >gi|255079254|ref|XP_002503207.1| DNA mismatch repair and recombination [Micromonas sp. RCC299] gi|226518473|gb|ACO64465.1| DNA mismatch repair and recombination [Micromonas sp. RCC299] Length = 640 Score = 285 bits (729), Expect = 2e-74, Method: Composition-based stats. Identities = 97/344 (28%), Positives = 171/344 (49%), Gaps = 15/344 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +L+++++N++AAGE+I RP+ A+KE++ENSLDA ++ + + GG Q+TDNG Sbjct: 5 PIHRLADEVVNRVAAGEVIHRPASALKEILENSLDAGATSIVVTVKDGGNKLLQVTDNGC 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +RH TSK+S +D S + TFGFRGEAL SI V++LT+ + Sbjct: 65 GIREADLPILCERHTTSKLSKFEDLSAMSTFGFRGEALASISFVANLTVTTMTRGATHAL 124 Query: 120 QIAISGEKIS--SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + + + RP A NPGT + V +LF+ +P R LKS E + DV++R A Sbjct: 125 KASYCDGALDGGGARPCAGNPGTTITVENLFYNVPTRRKALKSPHEEFAKVLDVVQRYAS 184 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN---------EKS 228 + V+FT R ++ + + +R+ + G + +++ Sbjct: 185 SRTDVAFTCRKHGEARPSLH-CAVTPHRIDRLRAIYGSQVARELTPMTLTGDADGDGDRA 243 Query: 229 NEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL 288 E ++ ++ +FIN R V+ + Y+ +P P L L Sbjct: 244 AEYSVDALVSTAGYHSRRTTFI-LFINDRLVECAPLRRACEAVYSAILPKAEKPFAYLSL 302 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 + P +DVNVHP K + F + + +++++ + + S Sbjct: 303 RLPPHTLDVNVHPTKREVAFLRQDEVVERVQRALERRLVEANGS 346 >gi|325183545|emb|CCA18006.1| DNA mismatch repair protein putative [Albugo laibachii Nc14] Length = 778 Score = 284 bits (726), Expect = 3e-74, Method: Composition-based stats. Identities = 124/567 (21%), Positives = 225/567 (39%), Gaps = 58/567 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++LS +++N+IAAGE+I RP A+KEL+ENS+DA ++ + I+ GG QI DNG Sbjct: 8 RIKRLSAQVVNRIAAGEVIHRPENAVKELLENSIDAGATNISITISQGGLKLIQIQDNGK 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+ +D I +FGFRGEAL SI V+H+T+ S+P Sbjct: 68 GILRDDLEIVCERFTTSKLQKFEDLCWIQSFGFRGEALASISHVAHVTITSKPAAQECAY 127 Query: 120 QIAISGEKISSVR--------PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + K + P A GT++ + DLF+ + R LK+ + I D+ Sbjct: 128 RAKYRDGKPIATCPGSNPDPAPCAGKDGTLIVIEDLFYNLSTRRQALKNAAEQYQRILDI 187 Query: 172 IRRMAIAY--PKVSFTFSTIKSNRYKMNFQ--STNGNFPERISQVIGEDFINNAVELNEK 227 +++ AI + K+ F + +N ++ G + + + G + Sbjct: 188 VQKYAIHFASKKIGFVCRKHQGMNCSLNTVQAASLGKTRQVVQSIFGTKVACELLSFQHT 247 Query: 228 SNE----------ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP 277 ++G F+ + FIN R V + Y+ IP Sbjct: 248 VVMDGITTATLEPCRVEGLISHANFS-LKRGHIFFFINHRLVSCGALKRACEYMYSIHIP 306 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL 337 +P + L L + + +DVNVHP K + F I I+++++K I K S + +L Sbjct: 307 KQCHPFLYLSLIMPSQNIDVNVHPTKQEVHFLYEEEIVESIVKALEKEIKKNDQSRTFLL 366 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 ++ + K + S + PT + D Sbjct: 367 Q------------------PIRNLMSQDETKASEDLSTKSEKTKGSTCTPTPDTNGDESS 408 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + L + Y +T + LV D EK R + ++S Sbjct: 409 QKSWISIDLSAKQVPHSRKYDALKTPNRLVRTDPRTIS----IEKYRVTSSQKTLSSSIP 464 Query: 458 LTPEIIDL-----LEGECALIMEHDEDLHRLGIKAERFGPNAIAIR--EIPAILSKKNIP 510 + + L + ++ ++ AE I + I A + +P Sbjct: 465 SSCKKQRLETPLKTPDAISARLDF-DEFED---DAEPESETKIESQGSSIGAPTQNRTMP 520 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENIL 537 ++++I +I ++ E+ Sbjct: 521 TSVQNLIQQIQAKRNAQLVKLFREHTF 547 >gi|330802334|ref|XP_003289173.1| hypothetical protein DICPUDRAFT_55923 [Dictyostelium purpureum] gi|325080749|gb|EGC34291.1| hypothetical protein DICPUDRAFT_55923 [Dictyostelium purpureum] Length = 805 Score = 283 bits (725), Expect = 4e-74, Method: Composition-based stats. Identities = 120/381 (31%), Positives = 196/381 (51%), Gaps = 18/381 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +LS +++N+I+AGE+I+RPS A+KEL+ENSLDA+S+ + + GG QI DNG Sbjct: 37 KIHRLSPEVVNKISAGEVIQRPSNALKELLENSLDAKSTNIIITVKDGGMKLLQIQDNGT 96 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK++ +D I +FGFRGEAL SI VSHL + ++ +N Sbjct: 97 GIRLDDMEIVCERFTTSKLTKFEDLRKIASFGFRGEALSSISHVSHLKIQTKTADSNCAY 156 Query: 120 QIAISGEKI----------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLIT 169 + K+ +P A GT + V DLFF P+R + LK+ E + I+ Sbjct: 157 RACYFNGKLSPSNPNDPSSCDPKPCAGVNGTQITVEDLFFNTPSRKSVLKNFSEEHSRIS 216 Query: 170 DVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVELNEK 227 +I++ AI PKV FT + ++ S N + IS + G D + + L Sbjct: 217 QLIKKYAINNPKVGFTLKKLGEPTPEV-ITSGNLTEQDVISSLFGNDLAKDLKEITLKSD 275 Query: 228 SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLL 287 E ++ +N N +F+NGR V K + + Y++ +P G +P + L Sbjct: 276 KFEFDVKALITNTNYNSKKTNFI-LFVNGRLVDSKNLKVGLEQIYSKYLPKGTHPFMFLR 334 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 L + P+ +DVN+HP KS ++ + I I Q I + ++ S S S +++ Sbjct: 335 LLVAPKNIDVNIHPTKSEVKILHEDQIIEIIQQKIDEELS--VSSNSKTFSTQVLLPGFD 392 Query: 348 DNAPKTHLPKYATSLTNTQEK 368 ++ + K TS T +Q K Sbjct: 393 NDQQTSSQKKQKTSATASQTK 413 >gi|86161612|gb|ABC86939.1| MLH1 [Saccharomyces cerevisiae] Length = 769 Score = 283 bits (723), Expect = 7e-74, Method: Composition-based stats. Identities = 115/397 (28%), Positives = 195/397 (49%), Gaps = 11/397 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KE++ENS+DA ++ ++ ++ GG QITDNG Sbjct: 4 RIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+ +D S I T+GFRGEAL SI V+ +T+ ++ ++ Sbjct: 64 GINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAW 123 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +++ + K+ S +PVA GT + V DLFF IP+RL L+S E + I DV+ R AI Sbjct: 124 RVSYAEGKMLESPKPVAGKDGTTILVEDLFFNIPSRLRALRSHNDEYSKILDVVGRYAIH 183 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN----AVELNEKSNEITLQ 234 + F+ + Y ++ + + +RI V + +N + E N ++ Sbjct: 184 SKDIGFSCKKFGDSNYSLSVKPSY-TVQDRIRTVFNKSVASNLITFHISKVEDLNLESVD 242 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G F + FIN R V + + + Y+ +P G P + L + IDP Sbjct: 243 GKVCNLNFISKKSISPIFFINNRLVTCDPLRRALNSVYSNYLPKGNRPFIYLGIVIDPAA 302 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN-APKT 353 VDVNVH K +RF + I I + ++ I TS IS+ ++ P Sbjct: 303 VDVNVHLTKREVRFLSQDEIIEKIANQLHAELS--AIDTSRTFKASSISTNKPESLIPFN 360 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + + + ++ ++ + + N L + Sbjct: 361 DTIESDRNRKSLRQAQVVENSYTTANSQLRKAKRQEN 397 >gi|328851685|gb|EGG00837.1| hypothetical protein MELLADRAFT_111529 [Melampsora larici-populina 98AG31] Length = 724 Score = 282 bits (722), Expect = 1e-73, Method: Composition-based stats. Identities = 114/396 (28%), Positives = 186/396 (46%), Gaps = 16/396 (4%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 L E ++N+IAAGEII RPS A+KEL+EN +DA + V+ + GG QI DNG G+ Sbjct: 2 PLEESVVNRIAAGEIIVRPSNAVKELLENCIDAGAKSVKITVKEGGVKMLQIQDNGSGIR 61 Query: 65 SEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 E++ + +R TSKI DD +++ T+GFRGEAL SI V+HLT+ ++ N G + Sbjct: 62 KEDLAILCERFTTSKIRNFDDLTSLTTYGFRGEALASISHVAHLTVATKTRDANVGWKAQ 121 Query: 123 ISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRR 174 S +++ + A N GT++ V D+F+ +P R L+S E I DV+ + Sbjct: 122 YSDSRLAPLKVGGPVEPQACAGNDGTVITVEDMFYNVPQRRKALQSGAEEYRKIVDVVSK 181 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 AI V+ + S +N +T E I ++ E + L + +E + Sbjct: 182 YAIHNEGVAISCKKAGSQTPDVNTSATATTL-ETIGRLYSEQLKKELIRLQFEDDEFECK 240 Query: 235 --GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 GY + +FIN R V + + Y +P G + + + LEI+P Sbjct: 241 VDGYCSGADYTLKKPVTL-IFINHRLVDCSPLRKALEITYTPILPKGAFGFIYISLEIEP 299 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK 352 +VD NVHP K +RF N I I + + + + S S + + + Sbjct: 300 SKVDPNVHPNKKEVRFLNEDEIIEKICEKLNSLLAGRNSSRSFQVQSMGFRNRDVSQRDR 359 Query: 353 THLPKYATSLTN--TQEKLFLQENRLSTNDLLPSDD 386 ++S + +KL ++++ T D + Sbjct: 360 ADEMVSSSSKSTKLPPQKLVRSDHQIQTLDSFVRPN 395 >gi|84784053|gb|ABC61990.1| MLH1-like protein 2 [Trichomonas vaginalis] Length = 793 Score = 282 bits (722), Expect = 1e-73, Method: Composition-based stats. Identities = 119/385 (30%), Positives = 191/385 (49%), Gaps = 9/385 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I KL + +I++IAAGEII P +KEL+ENS+DA + ++ I GG QI D+G G Sbjct: 25 IMKLDDSVIHKIAAGEIITEPVNVVKELLENSIDAVADHIQINIENGGYGLIQIKDDGTG 84 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++P+A RH TSK+ +D I TFGFRGEAL S+ +H+T+ ++ Q G Sbjct: 85 IRKSDMPLACARHTTSKLHKYNDLRTIGTFGFRGEALFSMSCCAHVTITTKTFQEEYGYS 144 Query: 121 IAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 S K+SS + +A GT VEVRDLF+ RLN + I +V+ + A+ Y Sbjct: 145 AEYSDGKMSSDLKNIAATEGTTVEVRDLFYNNRLRLNARPKATTDAKKIYEVVAKYAVTY 204 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF S+ + S + + + + ED + +T + Sbjct: 205 PELSFVLSSNGKEMLQTYGGSKTEDVLKLLFDI--EDTKSIFTLSFSPYPNVTATMFLSA 262 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+F+ +FINGR VQ + +I TAY+ET+ G P ++L + V+VNV Sbjct: 263 PSFS-SKKKMXAIFINGRLVQCQSFKHSIDTAYSETVGSGVSPFYFIILVMPQENVEVNV 321 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP+K ++F I I + I++++ ++ S +L K+ H+ + T P+ Sbjct: 322 HPSKKTVKFIGEVEIGEEIHKKIKESLEQRRGSRPVMLMKERT---HKTSQKPTDSPQID 378 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPS 384 ++ +K LS D Sbjct: 379 KFISQISQKPAEDAPPLSQRDKARQ 403 >gi|167522809|ref|XP_001745742.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776091|gb|EDQ89713.1| predicted protein [Monosiga brevicollis MX1] Length = 982 Score = 282 bits (721), Expect = 1e-73, Method: Composition-based stats. Identities = 114/372 (30%), Positives = 176/372 (47%), Gaps = 16/372 (4%) Query: 15 AAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 A +II+RP+ AIKE++ENSLDA S+ V + GG F QI DNG G+ E++ + +R Sbjct: 89 RASQIIQRPANAIKEMLENSLDAGSTSVTITVKQGGIKFLQIQDNGHGINKEDMDIVCER 148 Query: 75 HCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISS-- 130 TSK+S +D I T+GFRGEAL SI V+HL+++++ P + + K+ + Sbjct: 149 FTTSKLSAYEDLQTIATYGFRGEALASISHVAHLSIITKTPTSPCAYSASYRDGKMVAER 208 Query: 131 ------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF 184 +P A N GT + V +LF+ + AR LK+ E N I DV+ R AI Sbjct: 209 PDKPAAPKPCAGNTGTQITVEELFYNVQARRRALKNYNDELNRIVDVVSRYAIHNSGAGL 268 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL--QGYTGIPTF 242 T + ++ G+ + I V G +E+ + N++ +GY P + Sbjct: 269 TLKKFGEATALVRTTAS-GSTIDNIRAVYGNAIAQELIEIKREDNDLNFKLEGYMTNPNY 327 Query: 243 NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPA 302 N +FIN R+V+ I I Y+ +P G + L L I P VDVNVHP Sbjct: 328 N-TKKQTLILFINHRSVRSSTIKKAIDEVYSAYLPRGMHSFAYLSLLIKPELVDVNVHPT 386 Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSL 362 K + F N I I ++ +A+ G +TS + + + K A+ Sbjct: 387 KHEVHFLNEEEIVQSIAVAVSEAL--LGSNTSRTFQTQTLLPGAASLSSKPESAPVASQR 444 Query: 363 TNTQEKLFLQEN 374 T ++ E Sbjct: 445 TRRSQRAVAAEE 456 >gi|123464038|ref|XP_001317043.1| DNA mismatch repair protein [Trichomonas vaginalis G3] gi|121899767|gb|EAY04820.1| DNA mismatch repair protein, putative [Trichomonas vaginalis G3] Length = 775 Score = 282 bits (721), Expect = 1e-73, Method: Composition-based stats. Identities = 119/385 (30%), Positives = 191/385 (49%), Gaps = 9/385 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I KL + +I++IAAGEII P +KEL+ENS+DA + ++ I GG QI D+G G Sbjct: 7 IMKLDDSVIHKIAAGEIITEPVNVVKELLENSIDAVADHIQINIENGGYGLIQIKDDGTG 66 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++P+A RH TSK+ +D I TFGFRGEAL S+ +H+T+ ++ Q G Sbjct: 67 IRKSDMPLACARHTTSKLHKYNDLRTIGTFGFRGEALFSMSCCAHVTITTKTFQEEYGYS 126 Query: 121 IAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 S K+SS + +A GT VEVRDLF+ RLN + I +V+ + A+ Y Sbjct: 127 AEYSDGKMSSDLKNIAATEGTTVEVRDLFYNNRLRLNARPKATTDAKKIYEVVAKYAVTY 186 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P++SF S+ + S + + + + ED + +T + Sbjct: 187 PELSFVLSSNGKEMLQTYGGSKTEDVLKLLFDI--EDTKSIFTLSFSPYPNVTATMFLSA 244 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P+F+ +FINGR VQ + +I TAY+ET+ G P ++L + V+VNV Sbjct: 245 PSFS-SKKKMNAIFINGRLVQCQSFKHSIDTAYSETVGSGVSPFYFIILVMPQENVEVNV 303 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP+K ++F I I + I++++ ++ S +L K+ H+ + T P+ Sbjct: 304 HPSKKTVKFIGEVEIGEEIHKKIKESLEQRRGSRPVMLMKERT---HKTSQKPTDSPQID 360 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPS 384 ++ +K LS D Sbjct: 361 KFISQISQKPAEDAPPLSQRDKARQ 385 >gi|50548393|ref|XP_501666.1| YALI0C10032p [Yarrowia lipolytica] gi|49647533|emb|CAG81973.1| YALI0C10032p [Yarrowia lipolytica] Length = 656 Score = 281 bits (719), Expect = 2e-73, Method: Composition-based stats. Identities = 123/419 (29%), Positives = 197/419 (47%), Gaps = 29/419 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +LS INQIAAGEI+ P A+KELIEN++DA ++R++ + GG Q+TDNG G Sbjct: 2 IHQLSSTTINQIAAGEIVVGPQNALKELIENAIDAAATRIDVITKDGGVKLLQVTDNGSG 61 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ + +R CTSKI DD + +FGFRGEAL SI VSH+T++++ ++ Sbjct: 62 IAPDDLKLLCRRWCTSKIDTHDDLRTLTSFGFRGEALASISHVSHVTVITKLRSEPAASR 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 +IS A N GT + V+DLFF P RL L ++ DV+ R I Sbjct: 122 AKYELGEISEQALQAGNTGTQITVQDLFFNTPQRLRAL-NKADCHTKCVDVVSRYGIHND 180 Query: 181 --KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL----- 233 + SF S + + G+ +RI V G + VE+ + ++ Sbjct: 181 SVEFSFRRQNDSSMLFTLK-----GSKRDRIRVVYGSRVSGSLVEVEDDTDNADESVIST 235 Query: 234 ----------QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPV 283 + P ++ + +FIN R V + I + Y+ +P +P Sbjct: 236 LSNIGLSRAPELLISNPNYSNTKSTFI-IFINNRLVSCEPIRKALVAVYSRYLPTKAFPF 294 Query: 284 VVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST-SSVLSKKMI 342 V L L IDP +DVNVHP K +RF + I +F+ + ++K S V+ K + Sbjct: 295 VYLSLFIDPENLDVNVHPTKQEVRFLHQAEIVDFLSNLVDDTLSKIDESRVFDVVDAKKL 354 Query: 343 SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA 401 S+ H+ + P+ P +Q L ++ RL+ + + ++P E Sbjct: 355 STAHKPSNPQ--YPHSQNRTDYSQMHLPFKKVRLNETGTVDLSQFKSRDRDEPRVREEP 411 >gi|71651658|ref|XP_814502.1| mismatch repair protein MLH1 [Trypanosoma cruzi strain CL Brener] gi|70879480|gb|EAN92651.1| mismatch repair protein MLH1, putative [Trypanosoma cruzi] Length = 858 Score = 281 bits (718), Expect = 3e-73, Method: Composition-based stats. Identities = 109/394 (27%), Positives = 178/394 (45%), Gaps = 34/394 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++LS+ ++N+IAAGE+++RPS A+KEL+EN+LDA S+ ++ ++ GG Q+TD+G Sbjct: 3 RIKRLSDNVVNRIAAGEVVQRPSAALKELLENALDAGSTFIQVLVRDGGLGLLQVTDDGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPP----QN 115 G+ +++P+ +R+ TSK+ +D S I +FGFRGEAL SI VS +T+ + + Sbjct: 63 GIHRDDLPLLCERYATSKLRSFEDLSRITSFGFRGEALSSISYVSRVTVTTMRRVDKDEA 122 Query: 116 NTGA----QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 ++G + G P A NPGT + V +F+ R L E + I + Sbjct: 123 SSGTLAWRCQYLDGAMQGEPTPCAGNPGTSIRVEKMFYNSAVRRRALNRPSEEYSRIVAL 182 Query: 172 IRRMAIAYPKVSFTFSTI-KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE---- 226 I R A+A+P V F+ S F + + I G ++ EL Sbjct: 183 ISRYALAFPHVGFSCRREEGSGGKAEVFFPKDSSSLANIRLFHGPAIASHLHELKCVEAG 242 Query: 227 ----------------KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRT 270 + + GYT N +F+N R V+ I I T Sbjct: 243 AGGGSPETVLAKGGEAGEDCFLITGYTSGMALLNRNP-YLCIFVNNRLVESAVIKRAIDT 301 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 Y+ + G P VL + I P +VDVN+HP K + + II + +S++ A+ + Sbjct: 302 VYSGILTGGNRPFTVLFITIPPDRVDVNIHPTKHEVCLLDEEIIVAQLSESVRLAVMESA 361 Query: 331 ISTSSVLSK--KMISSFHQDNAPKTHLPKYATSL 362 ++ D P S Sbjct: 362 ARRQLDTRHILSKAAALAGDRGAHVSQPSPLPSS 395 >gi|301153985|gb|ADK66306.1| mismatch repair protein MLH1 [Hordeum vulgare subsp. vulgare] Length = 728 Score = 280 bits (717), Expect = 4e-73, Method: Composition-based stats. Identities = 102/379 (26%), Positives = 182/379 (48%), Gaps = 10/379 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+R S A+++L+ENS+DA+SS + + GG Q++D+G G Sbjct: 20 IRRLEESVVNRIAAGEMIQRTSSAVQDLVENSIDADSSTISVTVKDGGPKLIQVSDDGHG 79 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++P+ +RH TSK+S +D I + GFRGEAL S+ V H+T+ + G + Sbjct: 80 IRCEDLPILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYVGHVTVTTITEGQLHGYR 139 Query: 121 IAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ + + +P A GT + V +LF+ + AR L++ + I D I R A+ + Sbjct: 140 VSYRDGVMENDPKPCAAVKGTQIMVENLFYNMVARRKTLQNSNDDYPKIVDFISRFAVHH 199 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE-----ITLQ 234 V+F+ +NR ++ ST+ + I V G + + +E+ + Sbjct: 200 INVNFSCRKHGANRADVHSGSTSSRL-DAIRNVYGASVVRDLMEIQVSDENAVDEIFKMD 258 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G+ + +FIN R V + Y+ +P P + + + + P Sbjct: 259 GFISNANYVAKKTTMI-LFINDRLVDCTSLKRATEFVYSAILPQASKPFIYMSINLPPEH 317 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVN+HP K + N I I +I++ + + S+ Q N K Sbjct: 318 VDVNIHPTKKEVSLLNQERIIEKIKDAIEEKLVNCNNTRIFQTQALNPSALTQANTRKDM 377 Query: 355 LPKYATSLTNTQEKLFLQE 373 + +T +K+ + + Sbjct: 378 GTEVSTPTGEKSQKIPVSQ 396 >gi|328877002|gb|EGG25365.1| MutL DNA mismatch repair protein [Dictyostelium fasciculatum] Length = 1199 Score = 280 bits (716), Expect = 5e-73, Method: Composition-based stats. Identities = 113/375 (30%), Positives = 180/375 (48%), Gaps = 16/375 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+KLS +IN+I+AGE+I+RPS A+KELIENSLDA+S+ ++ + GG QI DNG Sbjct: 65 KIQKLSIDVINRISAGEVIQRPSNALKELIENSLDAQSTVIKVTVKDGGLKLLQIQDNGS 124 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+ +D I TFGFRGEAL SI VSHL ++++ +N Sbjct: 125 GIKKDDLDIVCERFTTSKLQKFEDLRKIETFGFRGEALSSISHVSHLKILTKTADSNCAY 184 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + + K++ +P A GT + DLFF +PAR L++ E + D+ Sbjct: 185 RAYYADGKLAPSTAGDTIDPKPCAGVNGTQITSEDLFFNVPARKKVLRNILEEHARVVDL 244 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNF-PERISQVIGEDFINN--AVELNEKS 228 +R+ AI KVSF + + Q G E IS + G + + + Sbjct: 245 VRKYAIFNSKVSFILKKADISTPDVFTQGGEGTTEKEVISLIYGSEIAKELKELSSSNDK 304 Query: 229 NEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL 288 E + G + +FIN R V + + + Y + + G YP + + L Sbjct: 305 LEYKMTGLFSTTNLSSKKPIFI-LFINNRLVDCRNLKLGLEQLYTKYLSKGAYPFIFVRL 363 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 ++PR VDVN+HP KS +RF I I + + +N + S + + Sbjct: 364 SLNPRNVDVNIHPTKSEVRFLYEDQIIELIQKVVDTELNLSIL--SKTFPQASDGAIPDS 421 Query: 349 NAPKTHLPKYATSLT 363 +++ Sbjct: 422 MPDGPSFSNTNNNIS 436 >gi|322826071|gb|EFZ30844.1| mismatch repair protein MLH1, putative [Trypanosoma cruzi] Length = 864 Score = 280 bits (715), Expect = 6e-73, Method: Composition-based stats. Identities = 109/394 (27%), Positives = 177/394 (44%), Gaps = 34/394 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++LS+ ++N+IAAGE+++RPS A+KEL+EN+LDA S+ ++ ++ GG Q+TD+G Sbjct: 3 RIKRLSDNVVNRIAAGEVVQRPSAALKELLENALDAGSTFIQVLVRDGGLGLLQVTDDGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPP----QN 115 G+ +++P+ +R+ TSK+ +D S I +FGFRGEAL SI VS +T+ + + Sbjct: 63 GIHRDDLPLLCERYATSKLRSFEDLSRITSFGFRGEALSSISYVSRVTVTTMRRVDKDEA 122 Query: 116 NTGA----QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 ++G + G P A NPGT + V +F+ R L E + I + Sbjct: 123 SSGTLAWRCQYLDGAMQGEPTPCAGNPGTSIRVEKMFYNSAVRRRALNRSSEEYSRIVAL 182 Query: 172 IRRMAIAYPKVSFTFST-IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE---- 226 I R A+A+P V F+ S F + + I G ++ EL Sbjct: 183 ISRYALAFPHVGFSCRREEGSGGKAEVFFPKDSSSLANIRLFHGPAIASHLHELKCVEAG 242 Query: 227 ----------------KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRT 270 + GYT N +F+N R V+ I I T Sbjct: 243 AGSGSPETVLAKRGEAGEECFLITGYTSGMALLNRNP-YLCIFVNNRLVESAVIKRAIDT 301 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 Y+ + G P VL + I P +VDVN+HP K + + II + +S++ A+ + Sbjct: 302 VYSGILTGGNRPFTVLFITIPPDRVDVNIHPTKHEVCLLDEEIIVAQLSESVRLAVMESA 361 Query: 331 ISTSSVLSK--KMISSFHQDNAPKTHLPKYATSL 362 ++ D P S Sbjct: 362 ARRQLDKRHILSKAAALAGDRGAHVSQPSPLPSS 395 >gi|324506169|gb|ADY42642.1| MutL protein 1 [Ascaris suum] Length = 707 Score = 280 bits (715), Expect = 6e-73, Method: Composition-based stats. Identities = 114/366 (31%), Positives = 177/366 (48%), Gaps = 18/366 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L + ++N+IAAGE+I RP+ AIKELIEN+LDA ++ + GG ++ DNG Sbjct: 3 RIARLPDDVVNRIAAGEVIVRPANAIKELIENALDANATEIIVTARNGGLDLIRVQDNGN 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + R TSK+ +D N+ TFGFRGEAL S+ V+HL+++SR + Sbjct: 63 GISKEDMRIVCDRFTTSKLRKFEDLENMSTFGFRGEALASLSHVAHLSIISRTADSLCAH 122 Query: 120 QIAISGEKISSVRP-VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + KI S A GT V LF+ P+R LK E N I DVI R AI Sbjct: 123 CAEYTDGKIVSDVRLSAGLVGTTVTAEQLFYNAPSRRRALKYPADEMNRIADVIVRYAIH 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVELNEKSNEITLQGY 236 P VSFTF S +GN I+ ++GE N ++ ++ +L GY Sbjct: 183 NPNVSFTFRRCGSGSD--FRTIGDGNVYNVIASLLGEKASKNLVMLDHKDEKLFFSLSGY 240 Query: 237 TGIPTFNRGNANQF---------YVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLL 287 +P+ ++FIN R+V+ + + + L V+L Sbjct: 241 MSLPSAFCTARTIQARQDRQKIFFLFINNRSVECPALKQGLDVVFGAQNTL--STFVLLS 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 L+I ++DVNVHP KS + F I + I I++ I+ S + +++S Sbjct: 299 LQIATNRIDVNVHPTKSTVFFLEQDAIISSIQDYIERVIHDSSGSCNMATCSSLLTSSAV 358 Query: 348 DNAPKT 353 + Sbjct: 359 TTCSQP 364 >gi|66807125|ref|XP_637285.1| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4] gi|74853037|sp|Q54KD8|MLH1_DICDI RecName: Full=DNA mismatch repair protein Mlh1; AltName: Full=MutL protein homolog 1 gi|60465685|gb|EAL63764.1| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4] Length = 884 Score = 279 bits (714), Expect = 7e-73, Method: Composition-based stats. Identities = 115/465 (24%), Positives = 214/465 (46%), Gaps = 53/465 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L+++++N+I+AGE+I+RPS A+KEL+EN LDA+S+ + + GG F QI DNG Sbjct: 62 KIHRLTQEVVNKISAGEVIQRPSNALKELLENCLDAKSTTITVTVKDGGMKFLQIQDNGS 121 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +R TSK++ +D +I +FGFRGEAL SI VSHL ++++ + Sbjct: 122 GIRLEDMGIVCERFTTSKLTKFEDLRSIQSFGFRGEALSSISHVSHLKILTKTADSPCAY 181 Query: 120 QIAISGEKISSV---------RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITD 170 + K++ +P A GT + V DLFF P+R N LK+ E + I Sbjct: 182 RACYLNGKLTPPSPNEQSSDPKPCAGVNGTQITVEDLFFNTPSRKNVLKNTVDEHSRIVL 241 Query: 171 VIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNF-PERISQVIGEDFIN---------- 219 ++++ AI P VSF +++ + + I + G D Sbjct: 242 LMKKYAINNPTVSFILKKQGDPTPEVHTSGGQNSLEKDVIGSLYGTDLSKELKIITIDPN 301 Query: 220 ---------------NAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFI 264 N + T++G+ +N N +FINGR V K + Sbjct: 302 NPNPNNDDDDNISGSQIKNSNLNRLDFTMKGFFSSTNYNSKKINFI-LFINGRLVDSKNL 360 Query: 265 LSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQK 324 + + Y++ +P G +P + + L + P+ +DVN+HP KS ++ + I FI Q + + Sbjct: 361 KTGLEQVYSKYLPKGTHPFMFIRLLVPPKNIDVNIHPTKSEVKILHEEQIIEFIQQKVDQ 420 Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA--------------TSLTNTQEKLF 370 ++ ++ + ++ ++ F QDN + + + T+ +E + Sbjct: 421 ELS-ISSNSKTFSTQILLPGFDQDNVSSSQKKQKNSQSSSTQTKSTNNNNNPTSRKEPIE 479 Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 ++++ ++ + D + + + G + Sbjct: 480 YAKDKIRSDSKSQTLDAFLNPMDYNNNNDSSIDDNDGSGIGRYDD 524 >gi|71650793|ref|XP_814087.1| mismatch repair protein MLH1 [Trypanosoma cruzi strain CL Brener] gi|70879030|gb|EAN92236.1| mismatch repair protein MLH1, putative [Trypanosoma cruzi] Length = 864 Score = 279 bits (714), Expect = 8e-73, Method: Composition-based stats. Identities = 109/394 (27%), Positives = 179/394 (45%), Gaps = 34/394 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++LS+ ++N+IAAGE+++RPS A+KEL+EN+LDA S+ ++ ++ GG Q+TD+G Sbjct: 3 RIKRLSDNVVNRIAAGEVVQRPSAALKELLENALDAGSTFIQVLVRDGGLGLLQVTDDGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPP----QN 115 G+ +++P+ +R+ TSK+ +D S I +FGFRGEAL SI VS +T+ + + Sbjct: 63 GIHRDDLPLLCERYATSKLRSFEDLSRITSFGFRGEALSSISYVSRVTVTTMRRVDKDEA 122 Query: 116 NTGA----QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 ++G + G P A NPGT + V +F+ R L E + I + Sbjct: 123 SSGTLAWRCQYLDGAMQGEPTPCAGNPGTSIRVEKMFYNSAVRRRALNRPSEEYSRIVAL 182 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYK-MNFQSTNGNFPERISQVIGEDFINNAVELNE---- 226 I R A+A+P V F+ + K F + + I G ++ EL Sbjct: 183 ISRYALAFPHVGFSCRREEGTGGKAEIFFPKDSSSLANIRLFHGPAIASHLNELKCVEAG 242 Query: 227 ----------------KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRT 270 + + GYT N +F+N R V+ I I T Sbjct: 243 AGSGSPETVLAKRGEAGEDCFLITGYTSGMALLNRNP-YLCIFVNNRLVESAVIKRAIDT 301 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 Y+ + G P VL + I P +VDVN+HP K + + II + +S++ A+ + Sbjct: 302 VYSGILTGGNRPFTVLFITIPPDRVDVNIHPTKHEVCLLDEEIIVAQLSESVRLAVMESA 361 Query: 331 ISTSSVLSK--KMISSFHQDNAPKTHLPKYATSL 362 ++ D P S Sbjct: 362 ARRQLDTRHVLSKAAALAGDRGAHVSQPSPLPSS 395 >gi|302664970|ref|XP_003024108.1| DNA mismatch repair protein, putative [Trichophyton verrucosum HKI 0517] gi|291188140|gb|EFE43490.1| DNA mismatch repair protein, putative [Trichophyton verrucosum HKI 0517] Length = 878 Score = 279 bits (714), Expect = 8e-73, Method: Composition-based stats. Identities = 108/376 (28%), Positives = 176/376 (46%), Gaps = 23/376 (6%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L +IN+IAAGEII P A+KELIENS+DA S+ VE ++ GG QITDNG G+ Sbjct: 86 KALDPDVINKIAAGEIIVAPMHALKELIENSVDAGSTSVEILVREGGLKLLQITDNGHGI 145 Query: 64 TSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 +++ + +R TSK+ +D S+I T+GFRGEAL SI V+HLT+ ++ ++ + Sbjct: 146 DHDDLSILCERFTTSKLQAFEDLSSIATYGFRGEALASISHVAHLTVTTKTAGSSCAWRA 205 Query: 122 AISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPA-------RLNFLKSEQVETN 166 S K+ +P+A GT + V +S E Sbjct: 206 HYSDGKLVPAKPGQNASPKPIAGRKGTQITVSTALENPSIIFSLSIYMHMLTRSASEEYA 265 Query: 167 LITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVEL 224 I D++ R A+ +F+ ++ S N + +RI Q+ G N ++E+ Sbjct: 266 KILDIVGRYAVHCSGTAFSCKKHGEAGVSLST-SINSSILDRIRQLHGGAVANELVSLEV 324 Query: 225 NEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 + K + ++ +FIN R V+ I + Y+ +P G +P V Sbjct: 325 DGKRWGCRASAWVTNANYH-AKKTTLLIFINHRAVESTAIKRAVEQTYSTFLPKGGHPFV 383 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 L LEI+P+++DVNVHP K + F N I I +I+ + + +S + + Sbjct: 384 YLDLEIEPQRLDVNVHPTKREVNFLNEDEIIESICSAIRTKLA--AVDSSRTFMTQTLLP 441 Query: 345 FHQDNAPKTHLPKYAT 360 + P T ++ Sbjct: 442 GIRPPEPATLAGDASS 457 >gi|323447423|gb|EGB03344.1| hypothetical protein AURANDRAFT_55567 [Aureococcus anophagefferens] Length = 690 Score = 279 bits (713), Expect = 1e-72, Method: Composition-based stats. Identities = 123/676 (18%), Positives = 242/676 (35%), Gaps = 99/676 (14%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGF 61 I K+ ++++G+++ + A+KEL+EN+LDA ++ +E I GG + + DNG Sbjct: 5 IAKIDTASARKLSSGQVVVDLAGAVKELLENALDAGATSIELRINDDGGGAEIECADNGH 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTG 118 G+ + + R TSK+ ++ + +FGFRGEAL S+ ++ + +++R + G Sbjct: 65 GIAPRDFALVAARSATSKLVNFEELRTVQSFGFRGEALASLRELAGEVLVVTRTSADAVG 124 Query: 119 AQIAISGEKISSVRPVAMNP-GTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 A+++ + I GT V VR LF P R + + + ++ A Sbjct: 125 ARLSFQRDGILKSSTPHARSVGTTVTVRGLFDCAPVRRADLARRWKWHVSRALRTVQAHA 184 Query: 177 IAYPKVSFTFSTI---KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE-----KS 228 + + + + R + E S + G F + E++ + Sbjct: 185 LVAVGCRLRLTLVSGGGATRRTAIAVQAPRSLRESASALFGHAFARSLEEVSFDLRGGED 244 Query: 229 NEITLQGYTGI------PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR-Y 281 + + G P G ++ ++F+NGR + + I + R Sbjct: 245 CSLAVIGLMSRAGGFDAPGPRGGGGDRQFLFVNGRPIDAPRVSRCIGDVWRSVEGDRRGR 304 Query: 282 PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK------------K 329 P VL + + P VDVNV P K + + T + + ++ Sbjct: 305 PAFVLDIRVPPSAVDVNVSPDKRDVVLDDETGLVAALRIALHDLWEPSRGSFAGGRSLAP 364 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 ++ S+ + S A + + AT+ + L SD Sbjct: 365 HVAPSTTPDTEAPCSLVLPIAVPSCVTSTATATNAPAREAMLVVPPTLRPTQRNSDTIAV 424 Query: 390 SED---NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH-------------- 432 ++ + + +A A++H + + H Sbjct: 425 AQVIALSPWQAARAHIDWNCAVAPARLHASSVFGTLAVQSRCGHGHRTVQIDRRPGGNVP 484 Query: 433 -------------------------------------AAHERLIFEKMRQDFNSTKITSQ 455 AA E+ +E + + T++ +Q Sbjct: 485 TAALAKTDFSAMEALGQFNLGFLVCRLGDHLFLVDQHAADEKFRYEAL---WRDTRVDTQ 541 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG----PNAIAIREIP----AILSKK 507 LL P +DL E ++E + R+G + +A+ +P A Sbjct: 542 PLLAPLSLDLGATEELALLERRCTVERVGFRLAVNDLAPPGRRVAVISVPSARGATFGVS 601 Query: 508 NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 +I +L+ ++D+ TT ++ + A+ AC ++ G + +M +LL + Sbjct: 602 DIRELIT-LLDDDAAHDTTLPKLPKLHTLFASKACRAAVMIGTPLIKTKMTQLLDHLATL 660 Query: 568 PNSSQCNHGRPTFIKL 583 C HGRPT L Sbjct: 661 LQPWNCPHGRPTTRHL 676 >gi|303283872|ref|XP_003061227.1| DNA mismatch repair and recombination [Micromonas pusilla CCMP1545] gi|226457578|gb|EEH54877.1| DNA mismatch repair and recombination [Micromonas pusilla CCMP1545] Length = 743 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 98/344 (28%), Positives = 166/344 (48%), Gaps = 15/344 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR+L+E ++N++AAGE+I RPS A+KEL+EN+LDA ++ + + GG Q+TD+G Sbjct: 9 PIRRLAEDVVNRVAAGEVIHRPSSALKELLENALDAGATAITVTVKDGGCKLLQVTDDGV 68 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ + +RH TSK++ +D + + TFGFRGEAL S+ V++LT+ + Sbjct: 69 GIRENDLAILCERHTTSKLATFEDLNEVATFGFRGEALASMSFVANLTVTTMTKDAPHAL 128 Query: 120 QIAISGE--KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + + + + P A GT + V +LF+ +P R L+S E N I DV++R A Sbjct: 129 KASYRDGVLENGAAMPCAGVKGTTIAVENLFYNVPTRRKALRSPTEEYNRIVDVVQRYAS 188 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE------- 230 + SF + R ++ +R+ V G L + Sbjct: 189 SRTATSFVIRKLGEARPALH-CPVATERVDRLRAVYGAAVAKELTPLRLNVSMPGAGAGG 247 Query: 231 --ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL 288 L +++ + +FIN R V+ + I YA +P P V L Sbjct: 248 LRFALDALISSSSYHSKKSTFV-LFINDRLVECAGLKRAIEAVYAAVLPKAEKPFVYAAL 306 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 + PR VDVNVHP K + F + + + + ++++ + S Sbjct: 307 TLPPRAVDVNVHPTKREVHFLHQDELIDEVQRAVEGVLRGANAS 350 >gi|170580896|ref|XP_001895452.1| DNA mismatch repair protein MutL containing protein [Brugia malayi] gi|158597590|gb|EDP35698.1| DNA mismatch repair protein MutL containing protein [Brugia malayi] Length = 684 Score = 277 bits (708), Expect = 4e-72, Method: Composition-based stats. Identities = 111/336 (33%), Positives = 170/336 (50%), Gaps = 18/336 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I R + IKELIEN+LDA ++ + GG ++ DNG G Sbjct: 2 IRRLPENVVNRIAAGEVIVRAANVIKELIENALDAGATEIIITAKNGGLDLLKVQDNGKG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++ + +R TSK+ +D + TFGFRGEAL SI V+ +T++S+ + Sbjct: 62 IAKNDLAIVCERFTTSKLEKYEDLECMSTFGFRGEALASISHVAKVTIISKTSDSPCAYV 121 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + K+ ++P A GT V DLF+ P+R LK E N I D++ R AI Sbjct: 122 GRYTDSKLQGDIKPSAGLDGTSVTAEDLFYNCPSRRRSLKYPADEMNRIADIVVRYAIHN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN--EITLQGYT 237 P VSFT S + N E IS ++G F + + LN + TL+G Sbjct: 182 PSVSFTLRRCGSGSD--FRTAGTNNLCETISSLLGGKFSKDLILLNHSDSALYFTLKGCF 239 Query: 238 GIPTFNRGNANQF---------YVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL 288 PT + Y+FINGR+V+ + + + + + P V++ L Sbjct: 240 VRPTASCTAETLQNRQNCQKVFYLFINGRSVECQALKQALDVVFGAQNTM--SPFVMISL 297 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQK 324 +I+PR+VDVNVHP KS + F I + I ++ Sbjct: 298 QIEPRRVDVNVHPTKSVVYFLEQDSIISSIQDYVEN 333 >gi|213404194|ref|XP_002172869.1| MutL family protein Mlh1 [Schizosaccharomyces japonicus yFS275] gi|212000916|gb|EEB06576.1| MutL family protein Mlh1 [Schizosaccharomyces japonicus yFS275] Length = 700 Score = 276 bits (707), Expect = 5e-72, Method: Composition-based stats. Identities = 139/571 (24%), Positives = 241/571 (42%), Gaps = 46/571 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L E ++N+IAAGEIIERP A+KELIENSLD+ES+ ++ ++ GG QI+DNG Sbjct: 9 RIRPLGEAVVNKIAAGEIIERPENAVKELIENSLDSESTIIDVLLKEGGLKLLQISDNGT 68 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++P+ QR TSKI+ +D S++ TFGFRGEAL SI +S LT+ ++ G Sbjct: 69 GIYNDDLPLLCQRFSTSKITKFEDLSSVKTFGFRGEALASISHISRLTVTTKRKDAVHGW 128 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + K++ +P A GT+V V DLF+ +P+R LK+ E I + Sbjct: 129 RAFYIDGKLAPATGHGSSAPQPCAGKQGTVVSVEDLFYNVPSRKVALKNGAEEFRRILLL 188 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS--- 228 I++ AI VSF+ + ++ S +RI QV G + N + Sbjct: 189 IQKYAIHNESVSFSCKKFGDSAATLSLSSRF-RRIDRIRQVYGSNLAKNLLPFEVYGGSL 247 Query: 229 -NEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLL 287 + QG + +FIN R V+ + + Y+E +P G P + L Sbjct: 248 LEGFSAQGLVSNANYASKKTVFL-LFINNRLVESTDLRKNLEEVYSEFLPKGASPFLYLS 306 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS---------TSSVLS 338 L I QVDVNVHP+K + F + I + + + K + + S+ Sbjct: 307 LNIPESQVDVNVHPSKRVVHFLHDQEIADLLRSHLSKVLENEDARRSYHVQTVLPSTTTM 366 Query: 339 KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 K S Q T + ++ + NR + + + + E Sbjct: 367 LKTPESNRQGRPSHTVYEHHMVRTDPREQSIKTLMNRHTPTSSQKTPACGPASEATDYEA 426 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF--NSTKITSQT 456 S ++ + + Q+ T+ E L + K Sbjct: 427 SPTPVASKSLSRSNLLQSEDKVYRTEVNYKSILELREEVLQSMHVLTTNILTEHKYVGLV 486 Query: 457 LLTPEIIDLLEGECALIMEHD----EDLHRLGI-KAERFG----PNAIAIREIPAI-LSK 506 + + ++++ E +++G+ + FG +I++R + + L + Sbjct: 487 CPERGLCVIQYNIGLFLVDYLSLSFELFYQIGLSEFCNFGCIKLEPSISVRTLLELGLPE 546 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 ++ ++ L ++ E +L Sbjct: 547 QDEVD---------GETKNKSELLEKTERLL 568 >gi|190346896|gb|EDK39083.2| hypothetical protein PGUG_03182 [Meyerozyma guilliermondii ATCC 6260] Length = 693 Score = 276 bits (707), Expect = 5e-72, Method: Composition-based stats. Identities = 116/617 (18%), Positives = 236/617 (38%), Gaps = 57/617 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K+ +L + +I Q+ A + + A++EL+ NS+DA+++ + I S +TDNGF Sbjct: 88 KLHQLDKDVIQQLVAPLSVSGYASAVRELLHNSIDAQATFISVKIHLDSMS-VMVTDNGF 146 Query: 62 GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 G+ ++ + ++ TSK D S++ T GFRGEAL +I VS T++S+ + Sbjct: 147 GINEADLGLVGTQNYTSKAEKDLSSVKTMGFRGEALFAISQVSSTTIVSKVDGFGANTRH 206 Query: 122 AISGEK-------------ISSVRPVAMNPGTIVEVRDLFFTIPARLNF--LKSEQVETN 166 + T+V VR LF R ++ Q + Sbjct: 207 LGDPNVDLFEPDAQVCNDIFAIDPTCLGTSWTVVIVRGLFANFKVRRAQLLSQNIQSILS 266 Query: 167 LITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE 226 + + + ++ +P+V + + + + + S I V G + +N Sbjct: 267 ELKNEVAECSLLFPRVKIEVNVVPAEQSIVVSPSMENPLVSTIRSVYGFRALPAYELVNV 326 Query: 227 KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 + + + G G ++ + ++FIN R E L VL Sbjct: 327 RYQQYRISGIIGK--WSWVSP-LKFIFINERKYIASS------QDLKEFNKLVHNSAYVL 377 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH 346 ++ ++ PAK R + +++ I++ ++K K +S Sbjct: 378 MVTCPTDEIT--QDPAKVLYRVHHWKVVKRMILELLEKFGVLDSPMKERSPRKSHLSPRK 435 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 ++P+ K + + + + LF +L N + S + + D + + Sbjct: 436 SLSSPRKSPSKPRSPVKSPTKGLFSS-RQLHPNHSISSFKTISAINVDSFRVLKQLDRKY 494 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE-KMRQDFNSTKITSQTL----LTPE 461 + A + ++ L IVDQHA ER+ E ++ TK+ Sbjct: 495 ILFVAIV-------ESHSRLFIVDQHACDERIRVESYLKDYIQRTKVNQHQNKAQLSQQL 547 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL---LRDIID 518 ++L + + H L G E F N + ++P +L K++ + + ++ Sbjct: 548 QLELSPTQILHLQSHHAQLQSFGFDIE-FRENHAFLLQVPEVLYDKSVSAVSLGIAQYLE 606 Query: 519 EIIDSSTTYTL-------------QDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 + + + + I + + AC +I G + EMN +L+ + Sbjct: 607 HLAANQKSSRIGEPHHWTHAVKDVPQIILDSINMRACRSAIMFGIPLTLAEMNYMLQCLF 666 Query: 566 KNPNSSQCNHGRPTFIK 582 + + C HGRP+ ++ Sbjct: 667 RCQHPFHCAHGRPSVVE 683 >gi|123474386|ref|XP_001320376.1| DNA mismatch repair protein [Trichomonas vaginalis G3] gi|84784018|gb|ABC61974.1| MLH1-like protein 1 [Trichomonas vaginalis] gi|121903180|gb|EAY08153.1| DNA mismatch repair protein, putative [Trichomonas vaginalis G3] Length = 898 Score = 276 bits (705), Expect = 1e-71, Method: Composition-based stats. Identities = 111/329 (33%), Positives = 170/329 (51%), Gaps = 6/329 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +L E +I +IAAGE+I PS KEL+ENS+DA S R+ T + GG S +I+DNG Sbjct: 5 RILQLDESVIKRIAAGEVINFPSNVAKELLENSIDAGSKRISTELQNGGYSLIKISDNGC 64 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++P+A QRH TSKI D N+ TFGFRGEAL S+ VSHL+++S+ +++ G Sbjct: 65 GINAADMPLACQRHATSKIQSFNDLRNVTTFGFRGEALFSMSCVSHLSILSKTEESSFGY 124 Query: 120 Q-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 G I + V + GT V + DLF+ P +L + I +++R AIA Sbjct: 125 SGNFQDGNLIGELSTVPITIGTTVTISDLFYNKPTKLRTSPDSATQNRKILQIVQRYAIA 184 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 YP++SF+ + + S++ + + + V + + T++ Y G Sbjct: 185 YPEISFSVICDGKEKMMTHGSSSHYDVISLLYGIDAR--SATFVLTGDIAKNTTVEMYLG 242 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P+ + VF+NGR VQ I I Y + G P +LL + P +VDVN Sbjct: 243 SPSAKKQLKES-AVFVNGRLVQCDHIKRAINAVYGSFLMRGEKPFAFVLLRMPPDKVDVN 301 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 VHP K + F N + + I I + Sbjct: 302 VHPTKKDVIFTNEQSLIDNICDIILAELK 330 >gi|238878189|gb|EEQ41827.1| conserved hypothetical protein [Candida albicans WO-1] Length = 611 Score = 275 bits (704), Expect = 1e-71, Method: Composition-based stats. Identities = 125/625 (20%), Positives = 234/625 (37%), Gaps = 63/625 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E +I QI + I ++EL++NSLDA ++ + I S I DNG G Sbjct: 2 ILRLDESVITQIRSHTIFHSLDSVVRELLQNSLDAGANEITIKIDLSSLS-VYIHDNGTG 60 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ-------N 115 +T +++ +H TSK H+ ++GEAL ++ A+S+LT++S+ P N Sbjct: 61 ITPDDLEKVTLQHYTSK-------WHSHNYKGEALFALKAISNLTIISKAPDYTIPFKLN 113 Query: 116 NTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS--EQVETNLITDVIR 173 N+ A++ GT+V ++F IP R +++ I + Sbjct: 114 NSVAELYNEYSGGYFQIGDINPQGTVVIAANMFRNIPVRREQIRTTPHAKLVEAIKVAVL 173 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 P+V+ + +++ + Q+ G V K+ ++ Sbjct: 174 ESLTPNPRVNLKIFLVNHTTLQLDQIVAICGHSPLLFQLFGVKTKFEPVRAKFKNIKVV- 232 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTV-----QDKFILSTIRTAYAETI---------PLG 279 G G A YVF+N R V + K + ++ I P Sbjct: 233 -GVIGREPIT---AKHQYVFVNDRRVTLSLGESKRLNDLFSSSGFNDIDFRTKTTDKPFY 288 Query: 280 RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK 339 ++P + + R+V + + + II I + + + K + ++ + + Sbjct: 289 KHPTFMFRVYPGKREVVQDSYTWNIVL-----RIIYKIIAKFLDRRQPPKPLLSTPPIHR 343 Query: 340 KMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE---NRLSTNDLLPSDDPTYSEDNDPV 396 L + +E R+ T LP + Sbjct: 344 TSDKYILTTKTKLGFLKENEIDGLVDNRPYHGKEAPLPRIPTIAHLPHQCTSTHTTPHLT 403 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 + Q+ + +I+ D LV++DQHA+ ER+ E+ Q+F S Sbjct: 404 SSQTDLAPEKFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQPNPGLR 463 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL--SKKNIPQLLR 514 L +P D+ E L ++ + + GI + I +P IL ++ + L+ Sbjct: 464 LHSPIAFDVHASELMLFDQYAANFNSFGICYTT-DTAQVVITHLPLILLTKVEDDAEFLK 522 Query: 515 D-IIDEIID---------------SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 D ++ D T+Y L I ++ + AC +I G + EM Sbjct: 523 DSLLQHCYDLHDHVKRISPNFDNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMQ 582 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKL 583 L+ ++ + QC HGRP+ + + Sbjct: 583 DLVNKLSRCKLPFQCAHGRPSIVPI 607 >gi|312082271|ref|XP_003143375.1| hypothetical protein LOAG_07794 [Loa loa] gi|307761459|gb|EFO20693.1| hypothetical protein LOAG_07794 [Loa loa] Length = 647 Score = 275 bits (703), Expect = 2e-71, Method: Composition-based stats. Identities = 113/336 (33%), Positives = 175/336 (52%), Gaps = 18/336 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I R + AIKELIEN+LDA ++ + GG ++ DNG G Sbjct: 2 IRRLPEDVVNRIAAGEVIVRAANAIKELIENALDAGATEIVITAKNGGLDLLKVQDNGKG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++P+ +R TSK+ +D + TFGFRGEAL SI V+ +T++S+ P + Sbjct: 62 IAKDDLPIVCERFTTSKLERYEDLECMSTFGFRGEALASITHVAKVTIISKIPDSPCAYV 121 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + K+ +++P A GT V DLF+ P+R LK E N I DV+ R AI Sbjct: 122 GRYTDSKLQGNIKPSAGLDGTTVTAEDLFYNCPSRRRALKYPADEMNRIADVVVRYAIHN 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV--ELNEKSNEITLQGYT 237 P VSFT S + N E IS ++G F + + + + TL+G Sbjct: 182 PSVSFTLRRCGSGSD--FRTAGTNNLCETISSLLGGKFSKDLILLNHGDSALYFTLKGCL 239 Query: 238 GIPTFNRGNANQF---------YVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL 288 PT + + Y+FINGR+V+ + + +A + P V++ L Sbjct: 240 VRPTASCTAESLQDRQNRQKVFYLFINGRSVECLALKQALDVVFAAQNTM--SPFVMISL 297 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQK 324 +I+P++VDVNVHP KS + F I + I ++ Sbjct: 298 QIEPKRVDVNVHPTKSIVYFLEQDSIISSIQDYVEN 333 >gi|70997465|ref|XP_753480.1| DNA mismatch repair protein Mlh1 [Aspergillus fumigatus Af293] gi|66851116|gb|EAL91442.1| DNA mismatch repair protein Mlh1, putative [Aspergillus fumigatus Af293] gi|159126791|gb|EDP51907.1| DNA mismatch repair protein Mlh1, putative [Aspergillus fumigatus A1163] Length = 709 Score = 275 bits (703), Expect = 2e-71, Method: Composition-based stats. Identities = 99/319 (31%), Positives = 161/319 (50%), Gaps = 14/319 (4%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DD 83 A+KELIEN++DA S+ +E ++ GG QITDNG G+ +++P+ +R TSK+ +D Sbjct: 3 ALKELIENAVDAGSTSIEILVKDGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKQFED 62 Query: 84 FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNP----- 138 S+I T+GFRGEAL SI ++HLT+ ++ ++ + S K+ +P Sbjct: 63 LSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAWRAHYSDGKLVPPKPGQSAAPKATA 122 Query: 139 ---GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 GT + V DLF+ +P R +S E I DV+ R A+ ++F+ + Sbjct: 123 GRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGIAFSCRKHGESGAG 182 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYTGIPTFNRGNANQFYVF 253 ++ T + ERI Q+ G N VE + ++ G ++ +F Sbjct: 183 IST-PTAASTVERIRQIHGSAVANELVEFQVEDSKLGFRSSGLVTNANYH-VKRTTILLF 240 Query: 254 INGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTI 313 IN R+V+ I + Y+ +P G +P V + LEI+P++VDVNVHP K + F N Sbjct: 241 INHRSVESTAIKRAVEQTYSSFLPKGGHPFVYIDLEIEPQRVDVNVHPTKREVNFLNEDE 300 Query: 314 IRNFIIQSIQKAINKKGIS 332 I I +I+ + + S Sbjct: 301 IIECICDAIKSKLAQVDSS 319 >gi|291563254|emb|CBL42070.1| DNA mismatch repair enzyme (predicted ATPase) [butyrate-producing bacterium SS3/4] Length = 248 Score = 275 bits (703), Expect = 2e-71, Method: Composition-based stats. Identities = 86/218 (39%), Positives = 129/218 (59%), Gaps = 5/218 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + INQIAAGE++ERP+ +KEL+EN++DA S+ + I GG F +ITDNG Sbjct: 1 MPIQVLDQSTINQIAAGEVVERPASVVKELMENAIDAGSTAITVEIRQGGIGFIRITDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+P+A RH TSKI +D + + GFRGEAL SI AVS + L+++ + TG Sbjct: 61 CGIKKEELPLAFLRHSTSKIRTAEDLLTVSSLGFRGEALSSIAAVSQVELITKTSGSLTG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ I G + + + GT R+LFF PAR FLK+E E +TD++ ++A++ Sbjct: 121 SRYRIEGGEEKGLEEIGAPDGTTFISRNLFFNTPARRKFLKTETTEGAHVTDLVEKIALS 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGED 216 +P++S +R S N N + I V G + Sbjct: 181 HPEISIRLIVNNQSRLH---TSGNHNLKDIIYTVYGRE 215 >gi|146418974|ref|XP_001485452.1| hypothetical protein PGUG_03182 [Meyerozyma guilliermondii ATCC 6260] Length = 693 Score = 274 bits (700), Expect = 4e-71, Method: Composition-based stats. Identities = 116/617 (18%), Positives = 235/617 (38%), Gaps = 57/617 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K+ +L + +I Q+ A + + A++EL+ NS+DA+++ + I S +TDNGF Sbjct: 88 KLHQLDKDVIQQLVAPLSVSGYASAVRELLHNSIDAQATFISVKIHLDSMS-VMVTDNGF 146 Query: 62 GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 G+ ++ + ++ TSK D S++ T GFRGEAL +I VS T++S+ + Sbjct: 147 GINEADLGLVGTQNYTSKAEKDLSSVKTMGFRGEALFAISQVSSTTIVSKVDGFGANTRH 206 Query: 122 AISGEK-------------ISSVRPVAMNPGTIVEVRDLFFTIPARLNF--LKSEQVETN 166 + T+V VR LF R ++ Q + Sbjct: 207 LGDPNVDLFEPDAQVCNDIFAIDPTCLGTSWTVVIVRGLFANFKVRRAQLLSQNIQSILS 266 Query: 167 LITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE 226 + + + + +P+V + + + + + S I V G + +N Sbjct: 267 ELKNEVAECLLLFPRVKIEVNVVPAEQSIVVSPSMENPLVSTIRSVYGFRALPAYELVNV 326 Query: 227 KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 + + + G G ++ + ++FIN R E L VL Sbjct: 327 RYQQYRISGIIGK--WSWVSP-LKFIFINERKYIASS------QDLKEFNKLVHNLAYVL 377 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH 346 ++ ++ PAK R + +++ I++ ++K K +S Sbjct: 378 MVTCPTDEIT--QDPAKVLYRVHHWKVVKRMILELLEKFGVLDSPMKERSPRKSHLSPRK 435 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 ++P+ K + + + + LF +L N + S + + D + + Sbjct: 436 SLSSPRKSPSKPRSPVKSPTKGLFSS-RQLHPNHSISSFKTISAINVDSFRVLKQLDRKY 494 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE-KMRQDFNSTKITSQTL----LTPE 461 + A + ++ L IVDQHA ER+ E ++ TK+ Sbjct: 495 ILFVAIV-------ESHLRLFIVDQHACDERIRVESYLKDYIQRTKVNQHQNKAQLSQQL 547 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL---LRDIID 518 ++L + + H L G E F N + ++P +L K++ + + ++ Sbjct: 548 QLELSPTQILHLQLHHAQLQSFGFDIE-FRENHAFLLQVPEVLYDKSVSAVSLGIAQYLE 606 Query: 519 EIIDSSTTYTL-------------QDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 + + + + I + + AC +I G + EMN +L+ + Sbjct: 607 HLAANQKSSRIGEPHHWTHAVKDVPQIILDSINMRACRSAIMFGIPLTLAEMNYMLQCLF 666 Query: 566 KNPNSSQCNHGRPTFIK 582 + + C HGRP+ ++ Sbjct: 667 RCQHPFHCAHGRPSVVE 683 >gi|145353672|ref|XP_001421130.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581366|gb|ABO99423.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 722 Score = 273 bits (698), Expect = 6e-71, Method: Composition-based stats. Identities = 96/388 (24%), Positives = 176/388 (45%), Gaps = 14/388 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L ++N++AAGE+I RPS A+KEL+ENSLDA + + GG ++ D+G G Sbjct: 17 IGRLPSDVVNRVAAGEVIHRPSNALKELVENSLDAGAKSIAVTTREGGNKLLRVQDDGHG 76 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++P+ +RH TSKI +D + +FGFRGEAL S+ V+H++ + + Sbjct: 77 VRIEDLPLLCERHATSKIEKFEDLARCESFGFRGEALASMSYVAHVSATTMAAGATHATR 136 Query: 121 IAISGEKISSV--RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + K+ + +P+A GT + V +LF+ + R LKS E + + +V++R A Sbjct: 137 ATYTDGKMDAEGAKPIAGVLGTTISVENLFYNVVTRRKALKSASEEYSKVLEVLQRYAAL 196 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFIN--------NAVELNEKSNE 230 V+FT +R ++ + ER+ + G + + + + Sbjct: 197 RTDVAFTCRKHGESRATLHT-PVAQSRVERLQAIYGPTVARDLKKLDFDSELSKKKFDFK 255 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 + + G ++ +FIN R V+ + + YA +P P V + L + Sbjct: 256 LQVDGLVSGGNYHSKKTTFI-LFINSRLVECAPLKRACESVYAAILPKAEKPFVFMHLRL 314 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 VDVNVHP K + F + I I ++K + S + + + + Sbjct: 315 PFEDVDVNVHPTKQEVHFLHQEAIVELIQSKLEKILLATNSSRTFTVQTLLPGAEKLAKK 374 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLST 378 + + + N+++ ++ T Sbjct: 375 DDENDAERSGDKENSEKADEPPASQAKT 402 >gi|281210065|gb|EFA84233.1| MutL DNA mismatch repair protein [Polysphondylium pallidum PN500] Length = 825 Score = 272 bits (696), Expect = 1e-70, Method: Composition-based stats. Identities = 110/347 (31%), Positives = 175/347 (50%), Gaps = 22/347 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KLS +IN+I AGE++ RPS A+KELIEN LDA S+ + + GG QI DNG Sbjct: 15 KIHKLSVDVINRINAGEVVLRPSNALKELIENCLDAHSTIITITLKEGGLKLLQIQDNGC 74 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +R TSK+S DD I TFGFRGEAL SI SHL +++R ++ Sbjct: 75 GIKLEDMSIVCERFTTSKLSKFDDLRKITTFGFRGEALSSISHCSHLKILTRTHESPYAY 134 Query: 120 QIAISGEKIS--------SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + + K+ +P A GT + V DLF+ P+R +K+ Q E N I D+ Sbjct: 135 RASYHDGKLHAPTPGQSAEPKPCAGLVGTQITVEDLFYNNPSRKLVIKNPQDEHNRIVDL 194 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDF--INNAVELNEKSN 229 I++ +I V+F ++ + E IS + G + + L+ Sbjct: 195 IKKYSINNSTVAFIVKKFGDPTPDVHT-PGSLTEKEVISILYGNEIGRELKELSLSNNQL 253 Query: 230 EITLQGYTGIPTFNRGNANQFYVFIN--------GRTVQDKFILSTIRTAYAETIPLGRY 281 + ++G+ ++ A +FIN R V+ K + S ++ Y + +P G + Sbjct: 254 DFEMKGWFTSTNYSGKKAVFI-LFINICVLFESLDRLVESKNLKSGLQRLYEKYLPKGTH 312 Query: 282 PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 P + + L ++P+ VDVN P KS ++F N I I + + +N+ Sbjct: 313 PFMYIRLHLNPKNVDVNCSPTKSEVQFLNEEAIIEMIQKLVDVQLNQ 359 >gi|145510949|ref|XP_001441402.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408652|emb|CAK74005.1| unnamed protein product [Paramecium tetraurelia] Length = 623 Score = 272 bits (695), Expect = 1e-70, Method: Composition-based stats. Identities = 101/487 (20%), Positives = 205/487 (42%), Gaps = 22/487 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+KL +++IN+IAAGE+++RP +KE++ENS+DA + + + G +I DNG G Sbjct: 2 IKKLPQEVINKIAAGEVVQRPYSVVKEMVENSIDAHAQNITIYLNNAGLDLIRIIDNGDG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ + +R+ TSKI +D + +FGFRGEAL SI VS +T++S+ G + Sbjct: 62 IMKEDYELLCERYATSKIRAAEDLFQLFSFGFRGEALASISFVSEMTVISKRKDQVLGYK 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + +K+ S+ P+ + GT +++ LF+ + R L ++ E I +I+ +++ + Sbjct: 122 GTYNSQKLLSMSPIGCSDGTEIQIAQLFYNLEKRRQAL-NKSEEKKSILQLIQSLSLHHS 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +V F + + + +I+Q ++ ++ +S+ I + Sbjct: 181 QVQFKLFYENKCEFSSFSRLDTISSIMKINQTCIQEKSFSSDIYKYESHLIFTK------ 234 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPL-----GRYPVVVLLLEIDPRQV 295 + + +FIN R V + I AY + G Y V L +++ P+ + Sbjct: 235 LSSVKYKRELCLFINDRFVDCDTLKKKITQAYQDCYLCLRVEDGGYYVY-LSIKLQPKDI 293 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 D NVHP K +RF N I I + +++ ++ + L + ++ K + Sbjct: 294 DPNVHPNKKIVRFLNEDEISTEISEKLKQELSPQQTVK---LVQTVLFQPKSQEEQKKNS 350 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 + SL N Q Q+ ++ + + +++ + +I + Sbjct: 351 FSFKQSLQNQQ---LYQKEKVRIDPKTQTLLQQFAKKSQAQLSQSLHSMIPNTQSQKIEE 407 Query: 416 NYIISQTTD-GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 + + E E ++ + Q + + + Sbjct: 408 ESNSIIDESINIKHENPKLDDELSKNESVKIIQTNQGSKIQEEKQQIQVSRTQRFKLSVE 467 Query: 475 EHDEDLH 481 E + Sbjct: 468 SQLELFN 474 >gi|145551871|ref|XP_001461612.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124429447|emb|CAK94239.1| unnamed protein product [Paramecium tetraurelia] Length = 685 Score = 272 bits (695), Expect = 1e-70, Method: Composition-based stats. Identities = 129/670 (19%), Positives = 254/670 (37%), Gaps = 95/670 (14%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L+++ I I+ ++ + +KELIENS+DA+++++ GK F++ DNG G Sbjct: 2 IKQLNQESILHISTSSTLQSLASFVKELIENSIDAQATQIIVNFFNNGKEGFEVIDNGIG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 +++ R TSKI +D + T GFRGEAL SI +S++T++S+ G + Sbjct: 62 ISTINQKQLATRGGTSKIENFEDLEFVVTHGFRGEALNSIATLSNVTIISKHKDEELGWK 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAY 179 I +A GT + V ++F+T+P R F K+ ++E N +++ AI Sbjct: 122 WEI----PQEPTKIARQTGTSIRVENIFYTLPVRAQEFKKNYKIEYNKAINILTEYAIIN 177 Query: 180 PKVSFTFSTI---KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + F + ++ N N +RI+ V+G+ N+ + + S + TL G+ Sbjct: 178 TNIEFKIYNEEEKNKKKLILDSGLANQNMKQRITNVLGDSIANDLIPFEKISQDFTLIGF 237 Query: 237 TGIPTFN-----RGNANQFYVFINGRTVQDKFILSTI-RTAYAETIPLGRYPVVVLLLEI 290 + + +Y +IN + + + I R Y + P G + +L + + Sbjct: 238 LSKSIESGSYKGQNRKTFWYCYINKKPINPPKQVLQIMRDIYRQHNPNGNF-FFILEINL 296 Query: 291 DP-RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 D NV K + +N +I I Q + + + K + + F Sbjct: 297 RQINDADFNVSVDKRDVYLKNEKLILENIEQIVTETLEKNKEKLKYIGRDGNLDQFIMAT 356 Query: 350 APKTHLPKYATSLTNTQEKLFLQENR-----------LSTNDLLPSDDPTYSEDNDPVEE 398 A ++ P + + T+++ + LS L +E N + Sbjct: 357 AKQSEKPAPSQIIAQTEKRKDPPPQQTKEIQKRNSTFLSQLKNLNPQKNIPNEFNQNESQ 416 Query: 399 SEATHYQLGIACAQI------------------HQNYIISQTTDGLVIVDQHAAHERLIF 440 + L Q + I + + + ++ E F Sbjct: 417 FTQSQQDLQQQQQQQQQQQQQQQQQQQQPTSQPNNEKIQLKINEVIQQKEEKQLFEADEF 476 Query: 441 EK--------------MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL--- 483 E+ ++ K +I L + C ++ +++L Sbjct: 477 EQLSKQNHFLKEHFNNLQIIGQFNKGFIICEHEEKIYVLDQHACDEKYNYERLINQLKFN 536 Query: 484 -------------GIKAE-----------------RFGPNAIAIREIPAILSKKNIPQLL 513 G E N + ++ P+ + + L Sbjct: 537 RAQLIVPITLKLSGFLLELLIDNQQQINDKYKYQVEITENCVKVKTCPSYSNIQLGADTL 596 Query: 514 RDIIDEIIDSSTTYTLQ-DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 I+D++ ++ +I+ LA+ AC SI G +Q+ +M +++ + + Sbjct: 597 LQILDQLSQGKKLDQIEIPQIKQKLASQACRTSIMVGSDLQAKQMENVVKNLTTLISPWN 656 Query: 573 CNHGRPTFIK 582 C HGRPT I+ Sbjct: 657 CPHGRPTLIQ 666 >gi|257454881|ref|ZP_05620132.1| DNA mismatch repair protein MutL [Enhydrobacter aerosaccus SK60] gi|257447814|gb|EEV22806.1| DNA mismatch repair protein MutL [Enhydrobacter aerosaccus SK60] Length = 530 Score = 271 bits (694), Expect = 2e-70, Method: Composition-based stats. Identities = 114/353 (32%), Positives = 180/353 (50%), Gaps = 27/353 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I KLS +INQIAAGE++ RP+ +KELIEN++DA ++ + I GG QI+DNG Sbjct: 5 RIHKLSPLLINQIAAGEVVTRPASVVKELIENAIDANATHIRIDIEQGGLGLIQISDNGM 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +AV RH TSK++ + IH+ GFRGEAL SI A+SHLTL S + G Sbjct: 65 GIHPDDMTLAVTRHATSKLANVSELVGIHSLGFRGEALASIAAISHLTLTSSHNDSGIGQ 124 Query: 120 QIAISGEKISS--VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+++SG ++S +RP+ + GT V VRDL+F +P R + LKS E I V++R+AI Sbjct: 125 QLSVSGSEVSQATIRPIVKHRGTCVSVRDLYFNVPGRRSHLKSIATEFAHIEQVVQRLAI 184 Query: 178 AYPKVSFTFSTIKSNRYKM--NFQSTNGNFP-------ERISQVIGEDFINNAVELNEKS 228 ++ V R+ + + Q+ + N S V E +N + + Sbjct: 185 SFADVQIELYHQDKLRFSLTQSAQAPHQNLEGAALPFLPAFSLVRLEQALNLPLANIAQP 244 Query: 229 NEITLQGY-----------TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET-- 275 ++LQG TG N ++IN R V D I I+ + Sbjct: 245 FYLSLQGLQAQTEELSAQVTGWFFIAHKNNLPKLIYINHRLVSDMAISQAIQKVGRKLGI 304 Query: 276 -IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 I L E+ ++VN+HP+K ++ + T I ++ Q + + + Sbjct: 305 GIDNSLQMGYALSFELPAEWINVNIHPSKQQVKIQPLTNILAWLSQHMLEQLQ 357 >gi|161833848|ref|YP_001598044.1| putative DNA mismatch repair protein MutL [Candidatus Sulcia muelleri GWSS] gi|152206338|gb|ABS30648.1| putative DNA mismatch repair protein MutL [Candidatus Sulcia muelleri GWSS] Length = 367 Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats. Identities = 99/337 (29%), Positives = 191/337 (56%), Gaps = 9/337 (2%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 M I+ LS+ + N+IA+GE+I PS +KE++ENS+DA + ++ ++ GGK+ I D Sbjct: 1 MTNVIKFLSKNVSNKIASGEVIHNPSSILKEILENSIDAYAKNIKIILKNGGKNRIHIID 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 +G GM+ + + +R+ TSKI+ +D NI T GFRGEAL I +V+ + + +R +++ Sbjct: 61 DGIGMSKNDAIKSFERYSTSKINKIEDLLNISTKGFRGEALSYISSVTQIEIETRYIESD 120 Query: 117 TGAQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 G ++ I K+ + P+AM+ G + ++++F+ IPA+ FLKS ++E I + ++ Sbjct: 121 IGIRLIIENGKLKYNPLPIAMDKGCSICIKNIFYNIPAKRKFLKSSKLELKNIINEFYKL 180 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A+++ ++F + + ++ ERI + GE +++ + +N + LQG Sbjct: 181 ALSHNDINFYLENDNKILFDLKS----SSYKERIIHIFGEKIKKFLIKIKKTTNLVKLQG 236 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y P + + N + Y+F+N R +++K I I T+Y I P + L ++P + Sbjct: 237 YITNPKYYKSNKLEQYLFLNKRFIKNKNIHDAIITSYEGLINKKYNPSYFIFLTMEPSKF 296 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 ++N+ P+K+ ++F + + I +I++ + K IS Sbjct: 297 NINISPSKTEVKFYDEICLCKQITSTIKECLGIKKIS 333 >gi|68482075|ref|XP_715055.1| hypothetical protein CaO19.7257 [Candida albicans SC5314] gi|46436660|gb|EAK96019.1| hypothetical protein CaO19.7257 [Candida albicans SC5314] Length = 636 Score = 270 bits (690), Expect = 5e-70, Method: Composition-based stats. Identities = 122/625 (19%), Positives = 231/625 (36%), Gaps = 63/625 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E +I QI + I ++EL++NSLDA ++ + I S I DNG G Sbjct: 27 ILRLDESVITQIRSHTIFHSLDSVVRELLQNSLDAGANEITIKIDLSSLS-VYIHDNGTG 85 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ-------N 115 +T +++ +H TSK H+ ++GEAL ++ +S+LT++S+ P N Sbjct: 86 ITPDDLEKVTLQHYTSK-------WHSHNYKGEALFALKVISNLTIISKAPDYTTPFKLN 138 Query: 116 NTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS--EQVETNLITDVIR 173 N+ A++ GT+V ++F IP R +++ I + Sbjct: 139 NSVAELYNEYSGGYFQIGDINPQGTVVIAANMFRNIPVRREQIRTTPHAKLVEAIKVAVL 198 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 +V+ + +++ + Q+ G V K+ ++ Sbjct: 199 ESLTPNARVNLKIFLVNHTTLQLDQIVAICGHSPLLFQLFGVKTKFEPVRAKFKNIKVV- 257 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTV-----QDKFILSTIRTAYAETI---------PLG 279 G G A YVF+N R V + K + ++ I P Sbjct: 258 -GVIGREPIT---AKHQYVFVNDRRVTLSLGESKRLNDLFSSSGFNDIDFRTKTTGKPFY 313 Query: 280 RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK 339 ++P + + R+V + + + II I + + + K + ++ + + Sbjct: 314 KHPTFMFRVYPGKREVVQDSYTWNIVL-----RIIYKIIAKFLDRRQPPKPLLSTPPIHR 368 Query: 340 KMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE---NRLSTNDLLPSDDPTYSEDNDPV 396 L + +E R+ T LP + Sbjct: 369 TSDKYILTTKTKLGFLKENEIDGLVDNRPYHGKEAPLPRIPTIAHLPHQCTSTHTTPHLT 428 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 + Q+ + +I+ D LV++DQHA+ ER+ E+ Q+F S Sbjct: 429 SSQTNLAPEKFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQPNPGLR 488 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL--SKKNIPQLLR 514 L +P + E L ++ + + GI + I +P IL ++ + L+ Sbjct: 489 LHSPIAFGVHASELMLFDQYAANFNSFGICYTT-DTAQVVITHLPLILLTKVEDDAEFLK 547 Query: 515 D-IIDEIID---------------SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 D ++ D T+Y L I ++ + AC +I G + EM Sbjct: 548 DSLLQHCYDLHDHVKRISPNFDNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMQ 607 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKL 583 L+ ++ + QC HGRP+ + + Sbjct: 608 DLVNKLSRCKLPFQCAHGRPSIVPI 632 >gi|150951659|ref|XP_001388013.2| DNA mismatch repair [Scheffersomyces stipitis CBS 6054] gi|149388780|gb|EAZ63990.2| DNA mismatch repair [Pichia stipitis CBS 6054] Length = 634 Score = 269 bits (688), Expect = 8e-70, Method: Composition-based stats. Identities = 128/641 (19%), Positives = 248/641 (38%), Gaps = 75/641 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IRKL+ ++ +++ + I + ++EL+ NSLDA++ VE + + Q+ DNG Sbjct: 6 RIRKLNPQVSSELRSQTIFNSLASVVQELLRNSLDAQAKVVEIRLDLDSLA-VQVADNGV 64 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ M +R+ TSK+ D I T+G+RGEAL ++G VS L+++S+ + Sbjct: 65 GIPADDMSMVGERYHTSKLKQIKDLPFISTYGYRGEALYALGLVSRLSIVSKSDSGDVTF 124 Query: 120 QIAISGEKISSVRPVAMNP-------------GTIVEVRDLFFTIPARLNFLK--SEQVE 164 IS + V GTIV L+ +P R ++ S+ Sbjct: 125 VRMISYNSNTEVYDYQNYTNDGFFRVEPIKKNGTIVTATGLYCNLPVRRQQIRAVSQFKI 184 Query: 165 TNLITDVIRRMAIAYPKVSFT------FSTIKSNRYKMNFQSTN--GNFPERISQVIGED 216 + I ++ + + +P VS S + +T NF + G+ Sbjct: 185 IDEIRHIVFQSLVKFPDVSIKVLRLDHDSLNPDILINYSPSNTRKTDNFACIFRNIYGKS 244 Query: 217 FINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 + L + + L G+ G + + Y+F NG + + + E+ Sbjct: 245 VLPKFHTLEAEQRGLQLTGFVGTDPVS--SKRFQYIFFNGSLQGYETTRIAVNQTFKESR 302 Query: 277 PLGRYPVVVLLLEIDPRQVDVNV--HPAKSYIRFRNPTIIR-NFIIQSIQKAINKKGIST 333 P V P+K R + I + A + T Sbjct: 303 FGD-----------IPESVSYRTGESPSKKRSRLSWVWPVFLVCIESVKKGATIEADEIT 351 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 V+ Q + + + + + + + Sbjct: 352 KFVVKVFKQFLVSQGFQVDSGPSVFGSPRISLSPSKRRKTSPSGDEEPRVKKSDQLDSTF 411 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDGL-----VIVDQHAAHERLIFEKMRQDF- 447 V ES T Q+ +I+ +++ L +++DQHA ER+ E + +DF Sbjct: 412 LNVAESGLTSGNY-RIVRQLDSKFILVSSSNNLGGKVLLVIDQHACDERIKVEALFKDFI 470 Query: 448 ----NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 ++ S ++ P + E L E+ E+L++ GI+ G I + +P I Sbjct: 471 FLVLDAHTNLSLRVVEPVTFAVSSVEVQLFEEYAENLNKFGIRFIIEGL-TIVVTHMPQI 529 Query: 504 -LSKKNI-PQLLRDII----DEIIDSSTT---------------YTLQDRIENILATMAC 542 L K +I +LR + +++ + S + L + +I+ + AC Sbjct: 530 ILEKSDIDADILRRWLLSHVNDLKEESKSAIVDTYSINDWFPFVRHLPTFLIDIINSKAC 589 Query: 543 YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + S+ G ++ EM +++R++ QC HGRP+ + L Sbjct: 590 HSSVVFGEVLEYSEMEKMVRQLLHCRLPFQCAHGRPSIVPL 630 >gi|332978303|gb|EGK15031.1| ATPase domain protein [Psychrobacter sp. 1501(2011)] Length = 645 Score = 269 bits (688), Expect = 8e-70, Method: Composition-based stats. Identities = 108/423 (25%), Positives = 178/423 (42%), Gaps = 52/423 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+KL ++NQ+AAGE++ RP+ +KELIEN++DA + ++ I GG +++D+G Sbjct: 26 RIKKLPPLLVNQLAAGEVVTRPASVVKELIENAIDAGAKNIDIRITQGGMGVIEVSDDGC 85 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ MAV R TSKI+D I T GFRGEAL + AVS LTL S + G Sbjct: 86 GIHPNDMIMAVTRFATSKIADVAHLQGIATLGFRGEALAATAAVSRLTLTSCSDDSGIGR 145 Query: 120 QIAISG--EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 ++ ++G + + PV GT+V VRDL+F +PAR LKS E I V++++A+ Sbjct: 146 ELNVAGILDDTPKLTPVVHARGTMVTVRDLYFNVPARRGNLKSISTEYAHIEMVVKQLAL 205 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGN----------------------FPERISQVIGE 215 VSF R+ + N R+ +I Sbjct: 206 VASDVSFNLWHNDKRRFNFESIGSADNSNYSFLGELTASESMPSVLRQSILARLLALIPT 265 Query: 216 DFINNAVELNEKSNEITLQGYTGIPTFNRGNAN---------------------QFYVFI 254 + + I + P + ++ ++I Sbjct: 266 SHNQDELFSENNLQPININLEGLRPQHSWSDSGVEPLSINGFLIPSVKALANSSYKLIYI 325 Query: 255 NGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 NGR V+D+ I +IR A +P VL + +++NVHP+K I+ +N + Sbjct: 326 NGRLVKDRRIAQSIRDCAAH-LPGIDSVGYVLFFNLPKAWLNLNVHPSKQCIKIQNLANV 384 Query: 315 RNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQEN 374 + ++ A+ K + S + Y S + L + N Sbjct: 385 TAHLEVGVRDALELWRHRQP----KPVKSDYRTQTTMTRRTSSYEASNYKGKSSLVAESN 440 Query: 375 RLS 377 Sbjct: 441 NPP 443 >gi|27904987|ref|NP_778113.1| DNA mismatch repair protein MutL [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46396394|sp|Q89A38|MUTL_BUCBP RecName: Full=DNA mismatch repair protein mutL gi|27904385|gb|AAO27218.1| DNA mismatch repair protein MutL [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 597 Score = 269 bits (687), Expect = 1e-69, Method: Composition-based stats. Identities = 124/526 (23%), Positives = 224/526 (42%), Gaps = 14/526 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + I+AGE+I P+ +KEL+ENS+D+ ++ + I GG + DNG Sbjct: 1 MFIKILPLSTSSYISAGEVICNPASVVKELMENSIDSSATCIHIEIKKGGLQSIVVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NT 117 G+ ++ ++ H TSKI D +NI T GFRGEAL SI AVS + L S + Sbjct: 61 CGIDKSDLKASLLHHATSKIYSVCDLNNITTLGFRGEALASISAVSRIILSSCNISSKKV 120 Query: 118 GAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G I G IS + V N GTI V DLFF P R +KSE E I +++R ++ Sbjct: 121 GWSIYSDGFGVISVPKLVVHNKGTICTVLDLFFNRPVRQKTIKSEYSEFLRIDEIVRSLS 180 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 ++ K+S + + + + ++ + G + V ++ N + + G+ Sbjct: 181 LSNNKLSVSLRHNDKLIRYYDNCNIDFCNINMLNAIYGLSSVIKVVPVDYFLNTMKITGW 240 Query: 237 TG-IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 + +++ Y +INGR + ++ + + A +E +L L+++ ++ Sbjct: 241 LYLLGSYHTSKKKFQYFYINGRIILNRSVHHAVYQAVSEINHYQYSVSYILYLKLNCNEL 300 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVN+HPAK I+ N +I FI Q+I ++ K+ I S ++ + Sbjct: 301 DVNIHPAKKIIKIINIRLIHVFICQAILYSLKKECILKKDCTKIIKNISNNKKKNNLNYN 360 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ----LGIACA 411 + +T+ +QEN S L + D + + + G Sbjct: 361 FQSNLDITS----CIVQENSYSIPQKLFNLDNVSIIETELKFKRFKCKDYLNTIFGNVLM 416 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 I Y++ + D L + A + K++ + + + E Sbjct: 417 VIKNFYLLIEKNDELFLFFLPRAKSLICELKLKFGVKNGLLIKKLRKKYFYFFKNNTEYH 476 Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 + E L +G+ A + IP ++ N+ ++ +I+ Sbjct: 477 FFLRFYEILSHVGLNFNITLKYA-ELNSIPFMIDDTNLGIIISEIL 521 >gi|50305373|ref|XP_452646.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641779|emb|CAH01497.1| KLLA0C10032p [Kluyveromyces lactis] Length = 704 Score = 269 bits (687), Expect = 1e-69, Method: Composition-based stats. Identities = 111/688 (16%), Positives = 240/688 (34%), Gaps = 108/688 (15%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++L + + +++ + E + + ++EL++NS+DA++++++ I + ++ DNG Sbjct: 1 MSIKRLDDTVSSRLKSHESVVSTTAVVRELVQNSVDADATKIKVDI-NTERFIIEVQDNG 59 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 FG+T ++ + + TSK+ I ++GFRGEAL + S + ++S+ + Sbjct: 60 FGITPSDLNLLGGHNITSKLESLQQLPAISSYGFRGEALHLMLQCSKVLIISKSKDYSGI 119 Query: 119 A-----QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL--KSEQVETNLITDV 171 A ++ GT++++ D+F+ P R + +S + I Sbjct: 120 WARELPAPAFISDEGKFPLMKGALSGTVIKISDVFYNYPVRRKMMEKQSISDLVSAIRTE 179 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQST----NGNFPERISQVIGEDFINNAV-ELNE 226 I + I +P + + + R ST + GE + ++ Sbjct: 180 ILTVLIKFPTLDVSVFINQQLRISSIAVSTLEPYPKQLDTCFHNIFGEILPRKQLKFVSA 239 Query: 227 KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET----------- 275 T++G I + + Y+FINGR D S + + T Sbjct: 240 SFKSHTVKGIVSINPI--QSKDYQYIFINGRKYSDSRFFSAVNKLFQSTKYVEKNWDSYS 297 Query: 276 -----IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 P YP+ ++ E+ D+ P K+ + + I+ + + G Sbjct: 298 VKSVGSPYSAYPLFIIGCEVPLEISDLIQDPGKTIFQSGTLKTLCPLILNVMSSFLKHLG 357 Query: 331 ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQE----KLFLQENRLSTNDLLPSDD 386 +S SS+ + T+ + ++ T + + ++L S Sbjct: 358 YEPGVDVSTFDNSSYFETAHYFTNTKRVELAVKPTNKHANGNRVHKPQNNKVLEILKSPP 417 Query: 387 PTYSEDNDPVEESEATHYQLGIA------------------------------------- 409 T + +E + Sbjct: 418 RTRGIFSRLLENTTGGRQCRDHHYDSEFDIQKLNLAGTESSYLKNHAVSDFKLSKSQIRN 477 Query: 410 ---CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL- 465 Q+ +I+ ++ L+++DQHA HER++ E M ++ + + + Sbjct: 478 FEVIQQVDLKFILVKSGGTLLMLDQHACHERILVENMLKETIIKCMNKCFNYVKLNMKMN 537 Query: 466 -LEGECALIMEHDEDLHRLGIKAERFGPNA----IAIREIPAILSKK---NIPQLLRDII 517 E E + GI E + I + + P +K + L ++ Sbjct: 538 ISAEEAGWFRESIPEFDTWGIVLEIKDIDTRSSVIELIKAPEFFHEKIKHDSAFLKHVLL 597 Query: 518 DEIIDSSTTYT----------------------LQDRIENILATMACYGSIRSGRKMQSI 555 I D ++ + I+ + +C +I G + Sbjct: 598 QHIYDLRSSKRRRITQLMKEQHSSNKWWIMVPHMPRVYTEIINSKSCRSAIMFGTSLSRT 657 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKL 583 E + ++ ++ K C HGRP+ + + Sbjct: 658 ECDVMISDLSKCQQPFHCAHGRPSVVPI 685 >gi|325526038|gb|EGD03708.1| DNA mismatch repair protein [Burkholderia sp. TJI49] Length = 243 Score = 268 bits (686), Expect = 1e-69, Method: Composition-based stats. Identities = 82/227 (36%), Positives = 134/227 (59%), Gaps = 9/227 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA ++ + V+ GG ITD+G G Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGATTLRIVLEEGGVKRISITDDGCG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+P+A+ RH TSKI ++ + T GFRGEAL SI +V+ +++ SR + Sbjct: 83 IPPDELPLALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMSITSRTADVAHATK 142 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + ++ P A GT +EVR+L+F PAR FLKSEQ E ++IRR A+A P Sbjct: 143 I---DAQTGALSPAAGAVGTTIEVRELYFNTPARRKFLKSEQTEFGHCLEMIRRAALARP 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK 227 V+ + N +R+++++G+ F + L+E+ Sbjct: 200 DVAISVLHNGKAVEHWNATEP----AQRVAKILGDGFATAHLPLDEQ 242 >gi|193075082|gb|ACF08543.1| MutL [Pseudomonas aeruginosa] gi|193075084|gb|ACF08544.1| MutL [Pseudomonas aeruginosa] gi|193075086|gb|ACF08545.1| MutL [Pseudomonas aeruginosa] gi|193075090|gb|ACF08547.1| MutL [Pseudomonas aeruginosa] gi|193075094|gb|ACF08549.1| MutL [Pseudomonas aeruginosa] gi|193075096|gb|ACF08550.1| MutL [Pseudomonas aeruginosa] gi|193075100|gb|ACF08552.1| MutL [Pseudomonas aeruginosa] gi|193075102|gb|ACF08553.1| MutL [Pseudomonas aeruginosa] gi|193075104|gb|ACF08554.1| MutL [Pseudomonas aeruginosa] gi|193075106|gb|ACF08555.1| MutL [Pseudomonas aeruginosa] gi|193075108|gb|ACF08556.1| MutL [Pseudomonas aeruginosa] gi|193075110|gb|ACF08557.1| MutL [Pseudomonas aeruginosa] gi|193075116|gb|ACF08560.1| MutL [Pseudomonas aeruginosa] gi|193075122|gb|ACF08563.1| MutL [Pseudomonas aeruginosa] gi|193075128|gb|ACF08566.1| MutL [Pseudomonas aeruginosa] gi|193075130|gb|ACF08567.1| MutL [Pseudomonas aeruginosa] gi|193075132|gb|ACF08568.1| MutL [Pseudomonas aeruginosa] gi|193075134|gb|ACF08569.1| MutL [Pseudomonas aeruginosa] gi|193075136|gb|ACF08570.1| MutL [Pseudomonas aeruginosa] gi|193075138|gb|ACF08571.1| MutL [Pseudomonas aeruginosa] gi|193075140|gb|ACF08572.1| MutL [Pseudomonas aeruginosa] gi|193075142|gb|ACF08573.1| MutL [Pseudomonas aeruginosa] gi|193075146|gb|ACF08575.1| MutL [Pseudomonas aeruginosa] Length = 274 Score = 268 bits (686), Expect = 2e-69, Method: Composition-based stats. Identities = 98/274 (35%), Positives = 155/274 (56%), Gaps = 3/274 (1%) Query: 44 TVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIG 101 + GG ++ D+G G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI Sbjct: 1 VEVEQGGIKLLRVRDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASIS 60 Query: 102 AVSHLTLMSRPPQNNTGAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 +V+ LT+ SR Q+ G + +P A GT VEVRDLFF PAR FL++ Sbjct: 61 SVARLTMTSRTADAGEAWQVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRA 120 Query: 161 EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 E+ E + + +VI+R+A+A V+F + ++ R+ V G+ F+ Sbjct: 121 EKTEFDHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQ 180 Query: 221 AVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 A+ + + N + L G+ G+PTF+R + Y ++NGR V+DK + +R AY + + GR Sbjct: 181 ALPIEVERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGR 240 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 +P VL E+DP VDVNVHP K +RFR+ ++ Sbjct: 241 HPTFVLFFEVDPAVVDVNVHPTKHEVRFRDSRMV 274 >gi|193075112|gb|ACF08558.1| MutL [Pseudomonas aeruginosa] Length = 274 Score = 268 bits (686), Expect = 2e-69, Method: Composition-based stats. Identities = 98/274 (35%), Positives = 155/274 (56%), Gaps = 3/274 (1%) Query: 44 TVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIG 101 + GG ++ D+G G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI Sbjct: 1 VEVEQGGIKLLRVRDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASIS 60 Query: 102 AVSHLTLMSRPPQNNTGAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 +V+ LT+ SR Q+ G + +P A GT VEVRDLFF PAR FL++ Sbjct: 61 SVARLTMTSRTADAGEAWQVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRA 120 Query: 161 EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 E+ E + + +VI+R+A+A V+F + ++ R+ V G+ F+ Sbjct: 121 EKTEFDHLQEVIKRLALARFDVAFHLRHNGKTIFALHEAQDELARARRVGAVCGQAFLEQ 180 Query: 221 AVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 A+ + + N + L G+ G+PTF+R + Y ++NGR V+DK + +R AY + + GR Sbjct: 181 ALPIEVERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGR 240 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 +P VL E+DP VDVNVHP K +RFR+ ++ Sbjct: 241 HPTFVLFFEVDPAVVDVNVHPTKHEVRFRDSRVV 274 >gi|227529692|ref|ZP_03959741.1| DNA mismatch repair protein MutL [Lactobacillus vaginalis ATCC 49540] gi|227350358|gb|EEJ40649.1| DNA mismatch repair protein MutL [Lactobacillus vaginalis ATCC 49540] Length = 505 Score = 268 bits (685), Expect = 2e-69, Method: Composition-based stats. Identities = 108/492 (21%), Positives = 201/492 (40%), Gaps = 61/492 (12%) Query: 160 SEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFIN 219 S Q E ITD++ R+A+A P+V+F+ + ++ + N N + ++ + G Sbjct: 1 SPQTELARITDIVNRLALANPQVAFSLTHNNK---ELFRTAGNDNLQQVVAAIYGIQVGK 57 Query: 220 NAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG 279 + + N+ + G +P R + + IN R +++ + I Y + +G Sbjct: 58 KMLPFAGEDNDFKISGLVSLPELTRASRQYITITINHRYIRNFELTKAIINGYESKLMVG 117 Query: 280 RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV--- 336 RYP+ VL +++DP VDVNVHPAK +R + I + I++ I+ + + Sbjct: 118 RYPIAVLNIQLDPVLVDVNVHPAKREVRLSKEPQLAGLIAKVIRQRISTENLIPDVDAKQ 177 Query: 337 ----------LSKKMISSFHQDNAPKTHL------------------------------- 355 L +++ + Q P T+ Sbjct: 178 FIPDEPDVDELERQLNEAAKQYETPATNFVHPSASSSSTSGIKNGGPADVDAADSIVHEP 237 Query: 356 ------PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE-------ESEAT 402 + A+S ++ +L E P + +E + Sbjct: 238 VVIHKKDELASSQMQKFDQRYLDEGIAYPFGSPDEQAPQKPTRAESIELDVRDKSDQSQK 297 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + Q+ ++++Q DGL IVDQHAA ER+ +EK R++ QT L P + Sbjct: 298 RFPDLQYIGQLQGTFLLAQAGDGLYIVDQHAAQERINYEKFRKEIGQVSDDQQTFLVPLV 357 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 ++ + I +H + L +G+ E FGPN+ +R P ++ +++I+ +I+ Sbjct: 358 LNYSTVDTMTITQHLDTLEAVGLHLESFGPNSFILRSHPTWFAEGQEEATAKEMIEWLIN 417 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 ++ D + M+C +I++ + E LL + K N C HGRP + Sbjct: 418 DGKI-SVHDFRQRTAIMMSCKRAIKANHHLDDREAKALLHRLPKCENPFNCPHGRPVTVH 476 Query: 583 LKLSDIEKLFGR 594 D+EK+F R Sbjct: 477 FNDRDLEKMFKR 488 >gi|193075144|gb|ACF08574.1| MutL [Pseudomonas aeruginosa] Length = 274 Score = 268 bits (685), Expect = 2e-69, Method: Composition-based stats. Identities = 98/274 (35%), Positives = 155/274 (56%), Gaps = 3/274 (1%) Query: 44 TVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIG 101 + GG ++ D+G G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI Sbjct: 1 VEVEQGGIKLLRVRDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASIS 60 Query: 102 AVSHLTLMSRPPQNNTGAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 +V+ LT+ SR Q+ G + +P A GT VEVRDLFF PAR FL++ Sbjct: 61 SVARLTMTSRTADAGEAWQVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRA 120 Query: 161 EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 E+ E + + +VI+R+A+A V+F + ++ R+ V G+ F+ Sbjct: 121 EKTEFDHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQ 180 Query: 221 AVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 A+ + + N + L G+ G+PTF+R + Y ++NGR V+DK + +R AY + + GR Sbjct: 181 ALPIEVERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGR 240 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 +P VL E+DP VDVNVHP K +RFR+ ++ Sbjct: 241 HPTFVLFFEVDPAVVDVNVHPTKHEVRFRDSRVV 274 >gi|193075098|gb|ACF08551.1| MutL [Pseudomonas aeruginosa] Length = 274 Score = 268 bits (685), Expect = 2e-69, Method: Composition-based stats. Identities = 97/274 (35%), Positives = 154/274 (56%), Gaps = 3/274 (1%) Query: 44 TVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIG 101 + GG ++ D+G G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI Sbjct: 1 VEVEQGGIKLLRVRDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASIS 60 Query: 102 AVSHLTLMSRPPQNNTGAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 +V+ LT+ SR Q+ G + +P A GT VEVRDLFF PAR FL++ Sbjct: 61 SVARLTMTSRTADAGEAWQVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRA 120 Query: 161 EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 E+ E + + +VI+R+A+A V+F + ++ R+ V G+ F+ Sbjct: 121 EKTEFDHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQ 180 Query: 221 AVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 A+ + + N + L G+ G+PTF+R + Y ++NGR V+DK + +R AY + + GR Sbjct: 181 ALPIEVERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGR 240 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 +P VL E+DP VDVNVHP K + FR+ ++ Sbjct: 241 HPTFVLFFEVDPAVVDVNVHPTKHEVSFRDSRMV 274 >gi|123400320|ref|XP_001301639.1| ATPase [Trichomonas vaginalis G3] gi|121882844|gb|EAX88709.1| ATPase, putative [Trichomonas vaginalis G3] Length = 585 Score = 268 bits (685), Expect = 2e-69, Method: Composition-based stats. Identities = 132/590 (22%), Positives = 245/590 (41%), Gaps = 28/590 (4%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L + + A E I P+ A++E+IEN DA + + + GG ++DNG G+ Sbjct: 2 KTLGKHDSTMVRATETISSPAHALREMIENVFDAGCTLLTIRVGNGGLDHISVSDNGPGI 61 Query: 64 TSEEIPMAVQRHCTSK-ISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 T E + M TSK D S G RG AL +I +S+LT+ + +N G ++ Sbjct: 62 TEEGLSMICDEGVTSKEFGKDVS-----GGRGRALEAISYLSYLTIDTCTDNSNNGWRLQ 116 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAIAYPK 181 + + GT V + LF+ P R ++ + + + + I ++ + AIA Sbjct: 117 FDENHTRKMEKITRPKGTTVTAQTLFYGQPVRRHYFLEHKSQQVSDIIEITQSFAIAS-S 175 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 + T + +++ + I + F + V L++ +E +L+ YT PT Sbjct: 176 ANMTVTLDNKLLIQVSTPKRDSRISTVFGSDIMKGFEHGEVSLDKWHSEASLEYYTATPT 235 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 N +N R + I+ + + P V + D + Sbjct: 236 ANSNKK--ILFIVNNRPCVCSGLYRAIKNEFR-LCAGPKLPSGVFFITAPRNTFDFIPNS 292 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 I F + + ++ + ++ +S L+ + S P LP+ T Sbjct: 293 PLISISFEHEN----ILQKTFCEILSSVWKKSSEKLTFNNVISEE----PIRSLPQM-TR 343 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP---VEESEATHYQLGIACAQIHQNYI 418 L NT+ + +T+D+L + D + E ++ Q +Q++I Sbjct: 344 LKNTESLGIECHCQATTDDILERFKNCQNYVPDYGLSYDAIETKAFKDMEIIGQWNQSFI 403 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 I++ + +DQHAA E FEK+R+ I SQ L++P +I E + E + Sbjct: 404 ITKYGCDIYAIDQHAAMEAQNFEKLRKKC---SIQSQRLISPIVISATPQEISAAEECKQ 460 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 G + N+I +++IP+I + L ++I + +S + + + +A Sbjct: 461 KCKEFGYDYD-ISDNSIHVKKIPSITTVATGSDDLLELITMLHESPASQPMTRKARIWMA 519 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL-KLSD 587 AC+ S+R G M +M LL M ++ C HGRPT+ ++ L + Sbjct: 520 YRACHSSVRVGDTMNHSQMKDLLNRMAQSDFPWNCPHGRPTWCEIWSLQE 569 >gi|289549216|ref|YP_003474204.1| DNA mismatch repair protein MutL [Thermocrinis albus DSM 14484] gi|289182833|gb|ADC90077.1| DNA mismatch repair protein MutL [Thermocrinis albus DSM 14484] Length = 426 Score = 268 bits (685), Expect = 2e-69, Method: Composition-based stats. Identities = 108/323 (33%), Positives = 166/323 (51%), Gaps = 19/323 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI L + IAAGE+I+ P+ +KEL+ENSLDA + R+E I GGK + ++ D+G Sbjct: 1 MKIEILPPDVRACIAAGEVIDSPADCVKELVENSLDASAKRIEVEIVKGGKRYIRVKDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++P+ V TSKI +D + T+GFRGEAL +I VS + + SR + G Sbjct: 61 TGIPPEDLPLVVLEGATSKIRRLEDLMHTTTYGFRGEALHAISKVSRMVISSRYFSEDVG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ I G ++ + M GT VEV DLF+ +P R FLK E E N IT +I+ A+A Sbjct: 121 REMRIEGGQVKEITQRGMGIGTQVEVFDLFYNLPVRQKFLKKEDTERNRITKLIKLYAMA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V+F + + + + I + E F E ++ L G Sbjct: 181 RPDVAFRLISEGKELLALPPAHHIAHRLQEIYNMPFETF-----ERESNGVKVRLSVSVG 235 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + ++ +NGR V +K +L IR +G V + +EI P +DVN Sbjct: 236 N------KTGEVFLVVNGRPVYNKNLLEYIRR------HVGYRKVCLCEVEIPPFLLDVN 283 Query: 299 VHPAKSYIRFRNPTIIRNFIIQS 321 VHP K +RF +++++ I +S Sbjct: 284 VHPKKREVRFLKESLVKDLIKES 306 Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 31/57 (54%) Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ AC +I++G +++ ++ LL+ N C HGRP + KL + +I + R Sbjct: 367 SSKACREAIKAGDRVEIPQLVELLKRWTSFQNREVCPHGRPIYFKLSIGEIYRQLDR 423 >gi|193075114|gb|ACF08559.1| MutL [Pseudomonas aeruginosa] Length = 274 Score = 268 bits (685), Expect = 2e-69, Method: Composition-based stats. Identities = 97/274 (35%), Positives = 155/274 (56%), Gaps = 3/274 (1%) Query: 44 TVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIG 101 + GG ++ D+G G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI Sbjct: 1 VEVEQGGIKLLRVRDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASIS 60 Query: 102 AVSHLTLMSRPPQNNTGAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 +V+ LT+ SR Q+ G + +P A GT VEVRDLFF PAR FL++ Sbjct: 61 SVARLTMTSRTADAGEAWQVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRA 120 Query: 161 EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 E+ E + + +VI+R+A+A V+F + ++ R+ V G+ F+ Sbjct: 121 EKTEFDHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQ 180 Query: 221 AVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 A+ + + N + L G+ G+PTF+R + Y ++NGR V+DK + +R AY + + GR Sbjct: 181 ALPIEVERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGR 240 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 +P+ VL E+DP VDVNVHP K +RF + ++ Sbjct: 241 HPIFVLFFEVDPAVVDVNVHPTKHEVRFPDSRVV 274 >gi|193075118|gb|ACF08561.1| MutL [Pseudomonas aeruginosa] Length = 274 Score = 268 bits (685), Expect = 2e-69, Method: Composition-based stats. Identities = 97/274 (35%), Positives = 154/274 (56%), Gaps = 3/274 (1%) Query: 44 TVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIG 101 + GG ++ D+G G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI Sbjct: 1 VEVEQGGIKLLRVRDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASIS 60 Query: 102 AVSHLTLMSRPPQNNTGAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 +V+ LT+ SR Q+ G + +P A GT VEVRDLFF PAR FL++ Sbjct: 61 SVARLTMTSRTADAGEAWQVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRA 120 Query: 161 EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 E+ E + + +VI+R+A+A V+F + ++ R+ V G+ F+ Sbjct: 121 EKTEFDHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQ 180 Query: 221 AVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 A+ + + N + L G+ G+PTF+R + Y ++NGR V+DK + +R AY + + GR Sbjct: 181 ALPIEVERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGR 240 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 +P VL E+DP VDVNVHP K + FR+ ++ Sbjct: 241 HPTFVLFFEVDPAVVDVNVHPTKHEVGFRDSRMV 274 >gi|213027073|ref|ZP_03341520.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 172 Score = 267 bits (683), Expect = 3e-69, Method: Composition-based stats. Identities = 80/171 (46%), Positives = 109/171 (63%), Gaps = 3/171 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLI 168 Q G + +V+P A GT +EV DLF+ PAR F+++E+ E N I Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFMRTEKTEFNHI 171 >gi|84784024|gb|ABC61977.1| PMS1-like protein [Trichomonas vaginalis] Length = 585 Score = 267 bits (683), Expect = 3e-69, Method: Composition-based stats. Identities = 133/590 (22%), Positives = 245/590 (41%), Gaps = 28/590 (4%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + LS+ + A E I P+ A++E+IEN DA + + T + GG ++DNG G+ Sbjct: 2 KTLSKHDSTMVRATETISSPAHALREMIENVFDAGCTLLTTRVGNGGLDHISVSDNGPGI 61 Query: 64 TSEEIPMAVQRHCTSK-ISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + E + M TSK D S G RG AL +I +S+LT+ + +N G ++ Sbjct: 62 SEEGLSMICDEGVTSKEFGKDVS-----GGRGRALEAISYLSYLTIDTCTDNSNNGWRLQ 116 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAIAYPK 181 + + GT V + LF+ P R + + + + + I ++ + AIA Sbjct: 117 FDENHTRKMEKITRPKGTTVTAQTLFYGQPVRRRYFLEHKSQQVSDIIEITQSFAIAS-S 175 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 + T + +++ + I + F + V L++ E +L+ YT PT Sbjct: 176 ANMTVTLDNKLLIQVSTPKRDSRISTVFGSDIMKGFEHGEVSLDKWHPEASLEYYTATPT 235 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 N +N R + I+ + + P V + D + Sbjct: 236 ANSNKK--ILFIVNNRPCVCSGLYRAIKNEFR-LCAGPKLPSGVFFITAPRNTFDFIPNS 292 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 I F + + ++ + ++ +S L+ + S P LP+ T Sbjct: 293 PLISISFEHEN----ILQKTFCEILSSVWKKSSEKLTFNNVISEE----PIRSLPQM-TR 343 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP---VEESEATHYQLGIACAQIHQNYI 418 L NT+ + +T+D+L + D + E ++ Q +Q++I Sbjct: 344 LKNTEPLGIECHCQATTDDILERFKNCQNYVPDYGLSYDAIETKAFKDMEIIGQWNQSFI 403 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 I++ + +DQHAA E FEK+R+ I SQ L++P +I E + E + Sbjct: 404 ITKYGCDIYAIDQHAAMEAQNFEKLRKKC---SIQSQRLISPIVISATPQEISAAEECKQ 460 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 G + N+I +++IP+I + L ++I + +S + + + +A Sbjct: 461 KCKEFGYDYD-ISDNSIHVKKIPSITTVATGSDDLLELITMLHESPASQPMTRKARIWMA 519 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL-KLSD 587 AC+ S+R G M +M LL M ++ C HGRPT+ ++ L + Sbjct: 520 YRACHSSVRVGDTMNHSQMKDLLNRMAQSDFPWNCPHGRPTWCEIWSLQE 569 >gi|193075092|gb|ACF08548.1| MutL [Pseudomonas aeruginosa] Length = 274 Score = 267 bits (683), Expect = 3e-69, Method: Composition-based stats. Identities = 97/274 (35%), Positives = 154/274 (56%), Gaps = 3/274 (1%) Query: 44 TVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIG 101 + GG ++ D+G G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI Sbjct: 1 VEVEQGGIKLLRVRDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASIS 60 Query: 102 AVSHLTLMSRPPQNNTGAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 +V+ LT+ SR Q+ G + +P A GT VEVRDLFF PAR FL++ Sbjct: 61 SVARLTMTSRTADAGEAWQVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRA 120 Query: 161 EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 E+ E + + +VI+R+A+A V+F + ++ R+ V G+ F+ Sbjct: 121 EKTEFDHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQ 180 Query: 221 AVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 A+ + + N + L G+ G+PTF+R + Y ++NGR V+DK + +R AY + + GR Sbjct: 181 ALPIEVERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLDNGR 240 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 +P VL E+DP VDVNVHP K + FR+ ++ Sbjct: 241 HPTFVLFFEVDPAVVDVNVHPTKHEVLFRDSRMV 274 >gi|193075148|gb|ACF08576.1| MutL [Pseudomonas aeruginosa] Length = 274 Score = 267 bits (683), Expect = 4e-69, Method: Composition-based stats. Identities = 97/274 (35%), Positives = 154/274 (56%), Gaps = 3/274 (1%) Query: 44 TVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIG 101 + GG ++ D+G G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI Sbjct: 1 VEVEQGGIKLLRVRDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASIS 60 Query: 102 AVSHLTLMSRPPQNNTGAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 +V+ LT+ SR Q+ G + +P A GT VEVRDLFF PAR FL++ Sbjct: 61 SVARLTMTSRTADAGEAWQVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRA 120 Query: 161 EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 E+ E + + +VI+R+A+A V+F + ++ R+ V G+ F+ Sbjct: 121 EKTEFDHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQ 180 Query: 221 AVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 A+ + + N + L G+ G+PTF+R + Y ++NGR V+DK + +R AY + + GR Sbjct: 181 ALPIEVERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGR 240 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 +P VL E+DP VDVNVHP K +R R+ ++ Sbjct: 241 HPTFVLFFEVDPAVVDVNVHPTKHEVRLRDSRMV 274 >gi|259149992|emb|CAY86795.1| Mlh3p [Saccharomyces cerevisiae EC1118] gi|323346146|gb|EGA80436.1| Mlh3p [Saccharomyces cerevisiae Lalvin QA23] Length = 715 Score = 267 bits (682), Expect = 5e-69, Method: Composition-based stats. Identities = 118/711 (16%), Positives = 239/711 (33%), Gaps = 134/711 (18%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL + ++ + + A++E+++NS+DA ++ ++ +I SF + D+G G Sbjct: 5 IRKLDSDVSERLKSQACTVSLASAVREIVQNSVDAHATTIDVMIDLPNLSF-AVYDDGIG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 +T ++ + ++ TSKI +D + T+G+RG+AL SI VS L + S+ N+ Sbjct: 64 LTRSDLNILATQNYTSKIRKMNDLVTMKTYGYRGDALYSISNVSKLFVCSKKKDYNSAWM 123 Query: 121 IAISGEKISSVRPVAMN--------------PGTIVEVRDLFFTIPARLNFLK--SEQVE 164 + + + GT+V V D+ + +P R LK Sbjct: 124 RKFPSKSVMLSENTILPIDPFWKICPWSRTKSGTVVIVEDMLYNLPVRRRILKEEPPFKT 183 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNF----------QSTNGNFPERISQVIG 214 N I + ++ + +P +S R + + + + V G Sbjct: 184 FNTIKADMLQILVMHPMISLNVQYTDKLRINTEVLFRSKNITEGLTKHQQMSQVLRNVFG 243 Query: 215 EDFINNAVELNE-KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIR---- 269 + ++ K NE ++G + +++INGR D+ + Sbjct: 244 AIIPPDMLKKVSLKFNEYQIEGIISKMPV--RLKDLQFIYINGRRYADRAFQGYVDSLFQ 301 Query: 270 -----TAYAETI-------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 + P +PV +L + D+ PAK ++ + I Sbjct: 302 AQDFGEKGMSLLKTKSVGKPYRSHPVFILDVRCPQTIDDLLQDPAKKIVKPSHIRTIEPL 361 Query: 318 IIQSIQKAI--------------------------------------------------N 327 I+++I+ + N Sbjct: 362 IVKTIRSFLTFQGYLTPDKSDSSFEIVNCSQKTATLPNSRSQLSKRNQVLNSKMKIARIN 421 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + S+ + + + +SL N D + Sbjct: 422 SYIGKPVVNGCRINNSTINYEKIKNIRIDGQKSSLRNKLSSRPYDSGFTEDYDSIGKTIT 481 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 +S + + E + I LV+VDQHA ER+ E++ Sbjct: 482 DFSISRSVLAKYEVINQVDKKFI-LIRCLDQSIHNCPLLVLVDQHACDERIRLEELFYSL 540 Query: 448 NSTKIT---SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN----AIAIREI 500 + +T L I++ E L + + + GI E + I+ + Sbjct: 541 LTEVVTGTFVARDLKDCCIEVDRTEADLFKHYQSEFKKWGIGYETIEGTMETSLLEIKTL 600 Query: 501 PAILSK--------------------KNIPQLLRDI--------IDEIIDSSTTYTLQDR 532 P +L+ K+ +L D+ +D++ + + Sbjct: 601 PEMLTSKYNGDKDYLKMVLLQHAHDLKDFKKLPMDLSHFENYTSVDKLYWWKYSSCVPTV 660 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 IL + AC ++ G ++ E L+ ++ + N +C HGRP+ + + Sbjct: 661 FHEILNSKACRSAVMFGDELTRQECIILISKLSRCHNPFECAHGRPSMVPI 711 >gi|151942635|gb|EDN60981.1| conserved protein [Saccharomyces cerevisiae YJM789] Length = 715 Score = 266 bits (681), Expect = 5e-69, Method: Composition-based stats. Identities = 118/711 (16%), Positives = 239/711 (33%), Gaps = 134/711 (18%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL + ++ + + A++E+++NS+DA ++ ++ +I SF + D+G G Sbjct: 5 IRKLDSDVSERLKSQACTVSLASAVREIVQNSVDAHATTIDVMIDLPNLSF-AVYDDGIG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 +T ++ + ++ TSKI +D + T+G+RG+AL SI VS L + S+ N+ Sbjct: 64 LTRSDLNILATQNYTSKIRKMNDLVTMKTYGYRGDALYSISNVSKLFVCSKKKDYNSAWM 123 Query: 121 IAISGEKISSVRPVAMN--------------PGTIVEVRDLFFTIPARLNFLK--SEQVE 164 + + + GT+V V D+ + +P R LK Sbjct: 124 RKFPSKSVMLSENTILPIDPFWKICAWSRTKSGTVVIVEDMLYNLPVRRRILKEEPPFKT 183 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNF----------QSTNGNFPERISQVIG 214 N I + ++ + +P +S R + + + + V G Sbjct: 184 FNTIKADMLQILVMHPMISLNVQYTDKLRINTEVLFRSKNITEGLTKHQQMSQVLRNVFG 243 Query: 215 EDFINNAVELNE-KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIR---- 269 + ++ K NE ++G + +++INGR D + Sbjct: 244 AIIPPDMLKKVSLKFNEYQIEGIISKMPV--RLKDLQFIYINGRRYADSAFQGYVDSLFQ 301 Query: 270 -----TAYAETI-------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 + P +PV +L + D+ PAK ++ + I Sbjct: 302 AQDFGEKGMSLLKTKSVGKPYRSHPVFILDVRCPQTIDDLLQDPAKKIVKPSHIRTIEPL 361 Query: 318 IIQSIQKAI--------------------------------------------------N 327 I+++I+ + N Sbjct: 362 IVKTIRSFLTFQGYLTPDKSDSSFEIVNCSQKTATLPDSRIQISKRNQVLNSKMKIARIN 421 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + S+ + + + +SL N D + Sbjct: 422 SYIGKPVVNGCRINNSTINYEKIKNIRIDGQKSSLRNKLSSRPYDSGFTEDYDSIGKTIT 481 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 +S + + E + I LV+VDQHA ER+ E++ Sbjct: 482 DFSISRSVLAKYEVINQVDKKFI-LIRCLDQSIHNCPLLVLVDQHACDERIRLEELFYSL 540 Query: 448 NSTKIT---SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN----AIAIREI 500 + +T L I++ E L + + + GI E + I+ + Sbjct: 541 LTEVVTGTFVARDLKDCCIEVDRTEADLFKHYQSEFKKWGIGYETIEGTMETSLLEIKTL 600 Query: 501 PAILSK--------------------KNIPQLLRDI--------IDEIIDSSTTYTLQDR 532 P +L+ K++ +L D+ +D++ + + Sbjct: 601 PEMLTSKYNGDKDYLKMVLLQHAHDLKDLKKLPMDLSHFENYTSVDKLYWWKYSSCVPTV 660 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 IL + AC ++ G ++ E L+ ++ + N +C HGRP+ + + Sbjct: 661 FHEILNSKACRSAVMFGDELTRQECIILISKLSRCHNPFECAHGRPSMVPI 711 >gi|193075126|gb|ACF08565.1| MutL [Pseudomonas aeruginosa] Length = 274 Score = 266 bits (681), Expect = 5e-69, Method: Composition-based stats. Identities = 98/274 (35%), Positives = 155/274 (56%), Gaps = 3/274 (1%) Query: 44 TVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIG 101 + GG ++ D+G G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI Sbjct: 1 VEVEQGGIKLLRVRDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASIS 60 Query: 102 AVSHLTLMSRPPQNNTGAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 +V+ LT+ SR Q+ G + +P A GT VEVRDLFF PAR FL++ Sbjct: 61 SVARLTMTSRAADAGEAWQVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRA 120 Query: 161 EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 E+ E + + +VI+R+A+A V+F + ++ R+ V G+ F+ Sbjct: 121 EKTEFDHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQ 180 Query: 221 AVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 A+ + + N + L G+ G+PTF+R + Y ++NGR V+DK + +R AY + + GR Sbjct: 181 ALPIEVERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGR 240 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 +P VL E+DP VDVNVHP K +RFR+ ++ Sbjct: 241 HPTFVLFFEVDPAVVDVNVHPTKHEVRFRDSRMV 274 >gi|254436265|ref|ZP_05049772.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Nitrosococcus oceani AFC27] gi|207089376|gb|EDZ66648.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Nitrosococcus oceani AFC27] Length = 244 Score = 266 bits (681), Expect = 6e-69, Method: Composition-based stats. Identities = 83/238 (34%), Positives = 134/238 (56%), Gaps = 6/238 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L + NQIAAGE++ERP+ +KEL+EN+LDA + R+E GG ++ D+G Sbjct: 8 RIQILPPALANQIAAGEVVERPASVLKELVENALDAGAQRIEIETEAGGIGLIRVRDDGC 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+A+ H TSK+ ++ NI T GFRGEAL SI AVS L+L SR N G Sbjct: 68 GIHHNDLPLALSSHATSKVRHGEELLNITTLGFRGEALASIDAVSRLSLSSRMADNEHGW 127 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I + + V+P+A GT VEVRDLF+ PAR FL+ E+ E + + ++A+++ Sbjct: 128 CIR----ENTPVQPIAHPLGTTVEVRDLFYNTPARRRFLRGEKTEFIRLRTIQTQLALSH 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 ++SF S + + + +RI+++ G +F +++ + G Sbjct: 184 FEISFRISYNRRPFLTLPACTCPPEQLKRITELCGRNFAEHSMYFKREIERAMPMGLV 241 >gi|193075088|gb|ACF08546.1| MutL [Pseudomonas aeruginosa] Length = 274 Score = 266 bits (680), Expect = 8e-69, Method: Composition-based stats. Identities = 96/274 (35%), Positives = 154/274 (56%), Gaps = 3/274 (1%) Query: 44 TVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIG 101 + GG ++ D+G G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI Sbjct: 1 VEVEQGGIKLLRVRDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASIS 60 Query: 102 AVSHLTLMSRPPQNNTGAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 +V+ LT+ SR Q+ G + +P A GT VEVRDLFF PAR FL++ Sbjct: 61 SVARLTMTSRTADAGEAWQVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRA 120 Query: 161 EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 E+ E + + +VI+R+A+A V+F + ++ R+ V G+ F+ Sbjct: 121 EKTEFDHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQ 180 Query: 221 AVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 A+ + + N + L G+ G+PTF+R + Y ++NGR V+DK + +R AY + + GR Sbjct: 181 ALPIEVERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGR 240 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 +P VL E+DP +DVNVHP K + FR+ ++ Sbjct: 241 HPTFVLFFEVDPAVLDVNVHPTKHEVGFRDSRMV 274 >gi|148652628|ref|YP_001279721.1| ATPase domain-containing protein [Psychrobacter sp. PRwf-1] gi|148571712|gb|ABQ93771.1| ATP-binding region, ATPase domain protein domain protein [Psychrobacter sp. PRwf-1] Length = 650 Score = 266 bits (680), Expect = 8e-69, Method: Composition-based stats. Identities = 104/473 (21%), Positives = 193/473 (40%), Gaps = 61/473 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+KL ++NQ+AAGE++ RP+ +KELIEN+LDA + +++ I GG ++ D+G Sbjct: 27 RIKKLPPLLVNQLAAGEVVTRPASVVKELIENALDAGARQIDVRITQGGMGIIEVADDGC 86 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ MAV R TSKI+D I T GFRGEAL + AVS LTL S + G Sbjct: 87 GIHPEDMVMAVTRFATSKIADVAHLQGIATLGFRGEALAATAAVSRLTLTSCCDDSGIGR 146 Query: 120 QIAISGE--KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++G + PV GT V V+DL+F +PAR LK+ E I V++++A+ Sbjct: 147 QLNVAGILEDTPQLVPVVHRRGTTVSVKDLYFNVPARRGNLKAISTEFMHIETVVKQLAL 206 Query: 178 AYPKVSFTFSTIKSNRYKMNFQST----------------------NGNFPERISQVIGE 215 VSF+ R+ + R+ V+ Sbjct: 207 VASDVSFSLWHNDKRRFNFAAINAEPSSPLTVSSSNLASEALSTQVMQALLTRLKSVLPP 266 Query: 216 DFINNAVELNE------------------------KSNEITLQGYTGIPTFNRGNANQFY 251 ++ + + ++G T N Sbjct: 267 SHEQASLLHDNNLQVLSLDLEALRVQYEGMRGINRSQEPLGIEGLIIPSTKALANHPYKL 326 Query: 252 VFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNP 311 ++INGR V+DK I ++R + + VL + +++NVHP+K I+ +N Sbjct: 327 IYINGRLVKDKRIAQSLRESINGFDHIA-SLGYVLFFNLPKAWLNLNVHPSKLCIKIQNL 385 Query: 312 TIIRNFIIQSIQKAINKKGIS----------TSSVLSKKMISSFHQDNAPKTHLPKYATS 361 + +++A+ + ++ + Q ++ + + + + Sbjct: 386 ANVMAHFEVGVREALQRWQKRQPIIQPIVQPPQYQINAQASVQVAQSHSHQISVSQGSKR 445 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 + + + + + ++ + N+ + + + + H Sbjct: 446 IAPSNHIDYPHNSSATASETTVPQLKQPVQTNESIAYYQTQGHHGQYTQSHPH 498 >gi|193075124|gb|ACF08564.1| MutL [Pseudomonas aeruginosa] Length = 274 Score = 266 bits (679), Expect = 1e-68, Method: Composition-based stats. Identities = 97/274 (35%), Positives = 153/274 (55%), Gaps = 3/274 (1%) Query: 44 TVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIG 101 + GG ++ D+G G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI Sbjct: 1 VEVEQGGIKLLRVRDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASIS 60 Query: 102 AVSHLTLMSRPPQNNTGAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 +V+ LT+ SR Q+ G + +P A G VEVRDLFF PAR FL++ Sbjct: 61 SVARLTMTSRTADAGEAWQVETEGRDMQPRVQPAAHPVGPSVEVRDLFFNTPARRKFLRA 120 Query: 161 EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 E+ E + + +VI+R+A+A V+F + + R+ V G+ F+ Sbjct: 121 EKTEFDHLQEVIKRLALARFDVAFHLRHNGKTIFALQEAKDELARARRVGAVCGQAFLEQ 180 Query: 221 AVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 A+ + + N + L G+ G+PTF+R + Y ++NGR V+DK + +R AY + + GR Sbjct: 181 ALPIEVERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGR 240 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 +P VL E+DP VDVNVHP K +RFR+ ++ Sbjct: 241 HPTFVLFFEVDPAVVDVNVHPTKHEVRFRDSRMV 274 >gi|213019733|ref|ZP_03335538.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994774|gb|EEB55417.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 429 Score = 265 bits (677), Expect = 2e-68, Method: Composition-based stats. Identities = 144/438 (32%), Positives = 239/438 (54%), Gaps = 25/438 (5%) Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI 231 + +A+ + FT ++ K Q++ N I ++F +N++E+ E+ I Sbjct: 1 MNNLAMINYSIGFTLTSGNKKLLKYVKQTSLFNRLCEIE----KEFQSNSLEVKEEEEGI 56 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 L+G+ P NRGN+ Q Y F+NGR ++D ++ IR AY + IP RYP VL LE+ Sbjct: 57 KLKGHICKPNVNRGNSTQIYTFVNGRPMKDNLLVGAIRYAYHDFIPNNRYPFAVLHLEVP 116 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI-----SSFH 346 QVDVNVHP KS +RF+N +I + + I K ++ + + + +++I S Sbjct: 117 YDQVDVNVHPNKSEVRFQNKRLIYEIVRRGIIKTLSTRFAAGDQGIEEELIFNDSKSQEQ 176 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQE------NRLSTNDLLPSDDPTYSEDNDPVEESE 400 D+ K ++ + E ++E R S + + + +E + Sbjct: 177 IDSQEKKDQKEFYEKRPSLLENRLMKEFNAPDERRQSLPETFKYGESPPQKGTMVLERKQ 236 Query: 401 AT---HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + LG A Q++ YII++ L+IVDQHAAHERLI+E + T I Q Sbjct: 237 IDLIADHPLGYARCQVYNTYIIAEAKGKLIIVDQHAAHERLIYECL------TSIKRQKF 290 Query: 458 LTPEIIDL-LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 L PE +++ + ++ + + L +G E + + ++EIPAIL N+ +++ +I Sbjct: 291 LLPETVEIKNQAGMEMVGMYKDRLFEMGFGIEIESEDKVRVKEIPAILGTINVKEMVMNI 350 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 +D +++ T +++++ ILAT+AC+GSIR+GR M+ EMN L+R+ME+ P + QCNHG Sbjct: 351 VDRLMEIGDTLPIEEKVNKILATIACHGSIRAGRAMKLEEMNELMRQMEETPYAGQCNHG 410 Query: 577 RPTFIKLKLSDIEKLFGR 594 RPT+I++KLSDIEKLF R Sbjct: 411 RPTYIEMKLSDIEKLFER 428 >gi|193075120|gb|ACF08562.1| MutL [Pseudomonas aeruginosa] Length = 274 Score = 265 bits (677), Expect = 2e-68, Method: Composition-based stats. Identities = 96/274 (35%), Positives = 153/274 (55%), Gaps = 3/274 (1%) Query: 44 TVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIG 101 + GG ++ D+G G+ ++++P+A+ RH TSKI + D + + GFRGEAL SI Sbjct: 1 VEVEQGGIKLLRVRDDGRGIPADDLPLALARHATSKIRELEDLERVMSLGFRGEALASIS 60 Query: 102 AVSHLTLMSRPPQNNTGAQIAISGEKISSV-RPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 +V+ LT+ SR Q+ G + +P A GT VEVRDLFF PAR FL++ Sbjct: 61 SVARLTMTSRTADAGEAWQVETEGRDMQPRVQPAAHPVGTSVEVRDLFFNTPARRKFLRA 120 Query: 161 EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 E+ E + + +VI+R+A+A V+F + ++ R+ V G+ F+ Sbjct: 121 EKTEFDHLQEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQ 180 Query: 221 AVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 A+ + + N + L G+ G+PTF+R + Y ++NGR V+DK + + AY + + GR Sbjct: 181 ALPIEVERNGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVPQAYRDVLYNGR 240 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 +P VL E+DP VDVNVHP K + FR+ ++ Sbjct: 241 HPTFVLFFEVDPAVVDVNVHPTKHEVGFRDSRMV 274 >gi|15606703|ref|NP_214083.1| DNA mismatch repair protein MutL [Aquifex aeolicus VF5] gi|3914081|sp|O67518|MUTL_AQUAE RecName: Full=DNA mismatch repair protein mutL gi|2983934|gb|AAC07483.1| DNA mismatch repair protein MutL [Aquifex aeolicus VF5] Length = 425 Score = 265 bits (677), Expect = 2e-68, Method: Composition-based stats. Identities = 115/321 (35%), Positives = 160/321 (49%), Gaps = 20/321 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M ++ L ++ IAAGE+IE P +KEL+ENSLDA++++VE I GGK ++ DNG Sbjct: 1 MFVKLLPPEVRKVIAAGEVIESPVDVVKELVENSLDAKATKVEVEIVKGGKRLIRVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++ V + TSKI D NI T+GFRGEAL SI +VS L SR Q G Sbjct: 61 TGIHPEDVEKVVLQGATSKIETEKDLMNISTYGFRGEALYSISSVSKFKLRSRFFQEKEG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I + I R V M GT VEVRDLFF +P R FLK E E + ++I+ A+ Sbjct: 121 KEIEVEAGNILGTRRVGMPVGTEVEVRDLFFNLPVRRKFLKKEDTERRKVLELIKEYALT 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P+V FT + K+ + ER+ +V F EL + ITL+ + Sbjct: 181 NPEVEFTLFSEGRETLKLK----KSSLKERVEEV----FQTKTEELYAEREGITLRAFVS 232 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 YVFIN R +Q+K + +R + G +VVL E+ P VD N Sbjct: 233 RNQRQGKY----YVFINKRPIQNKNLKEFLRKVF------GYKTLVVLYAELPPFMVDFN 282 Query: 299 VHPAKSYIRFRNPTIIRNFII 319 VHP K + + Sbjct: 283 VHPKKKEVNILKERKFLELVR 303 Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 6/96 (6%) Query: 503 ILSKKNIPQ-LLRDIIDEIIDSSTTYTLQDRIE-NILA--TMACYGSIRSGRKMQSIEMN 558 IL + + L++D E + + L++RI L +AC S+++G+K+ ++ Sbjct: 330 ILGQMDETFILVKD--SEYLYFVDQHLLEERINYEKLKDENLACRISVKAGQKLSEEKIR 387 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 L++ N C HGRP + K+ L +I + GR Sbjct: 388 ELIKTWRNLENPHVCPHGRPIYYKIPLREIYEKVGR 423 >gi|6325093|ref|NP_015161.1| Mlh3p [Saccharomyces cerevisiae S288c] gi|74627261|sp|Q12083|MLH3_YEAST RecName: Full=DNA mismatch repair protein MLH3; AltName: Full=MutL protein homolog 3 gi|1370348|emb|CAA97869.1| unnamed protein product [Saccharomyces cerevisiae] gi|1403545|emb|CAA65557.1| P2550 protein [Saccharomyces cerevisiae] gi|285815378|tpg|DAA11270.1| TPA: Mlh3p [Saccharomyces cerevisiae S288c] Length = 715 Score = 264 bits (676), Expect = 2e-68, Method: Composition-based stats. Identities = 117/711 (16%), Positives = 239/711 (33%), Gaps = 134/711 (18%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL + ++ + + A++E+++NS+DA ++ ++ +I SF + D+G G Sbjct: 5 IRKLDSDVSERLKSQACTVSLASAVREIVQNSVDAHATTIDVMIDLPNLSF-AVYDDGIG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 +T ++ + ++ TSKI +D + T+G+RG+AL SI VS+L + S+ N+ Sbjct: 64 LTRSDLNILATQNYTSKIRKMNDLVTMKTYGYRGDALYSISNVSNLFVCSKKKDYNSAWM 123 Query: 121 IAISGEKISSVRPVAMN--------------PGTIVEVRDLFFTIPARLNFLK--SEQVE 164 + + + GT+V V D+ + +P R LK Sbjct: 124 RKFPSKSVMLSENTILPIDPFWKICPWSRTKSGTVVIVEDMLYNLPVRRRILKEEPPFKT 183 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNF----------QSTNGNFPERISQVIG 214 N I + ++ + +P +S R + + + + V G Sbjct: 184 FNTIKADMLQILVMHPMISLNVQYTDKLRINTEVLFRSKNITEGLTKHQQMSQVLRNVFG 243 Query: 215 EDFINNAVELNE-KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIR---- 269 + ++ K NE ++G + +++INGR D + Sbjct: 244 AIIPPDMLKKVSLKFNEYQIEGIISKMPVG--LKDLQFIYINGRRYADSAFQGYVDSLFQ 301 Query: 270 -----TAYAETI-------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 + P +PV +L + D+ PAK ++ + I Sbjct: 302 AQDFGEKGMSLLKTKSVGKPYRSHPVFILDVRCPQTIDDLLQDPAKKIVKPSHIRTIEPL 361 Query: 318 IIQSIQKAI--------------------------------------------------N 327 I+++I+ + N Sbjct: 362 IVKTIRSFLTFQGYLTPDKSDSSFEIVNCSQKTATLPDSRIQISKRNQVLNSKMKIARIN 421 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + + S+ + + + + L N D + Sbjct: 422 SYIGKPAVNGCRINNSTINYEKIKNIRIDGQKSRLRNKLSSRPYDSGFTEDYDSIGKTIT 481 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 +S + + E + I LV+VDQHA ER+ E++ Sbjct: 482 DFSISRSVLAKYEVINQVDKKFI-LIRCLDQSIHNCPLLVLVDQHACDERIRLEELFYSL 540 Query: 448 NSTKIT---SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN----AIAIREI 500 + +T L I++ E L + + + GI E + I+ + Sbjct: 541 LTEVVTGTFVARDLKDCCIEVDRTEADLFKHYQSEFKKWGIGYETIEGTMETSLLEIKTL 600 Query: 501 PAILSK--------------------KNIPQLLRDI--------IDEIIDSSTTYTLQDR 532 P +L+ K+ +L D+ +D++ + + Sbjct: 601 PEMLTSKYNGDKDYLKMVLLQHAHDLKDFKKLPMDLSHFENYTSVDKLYWWKYSSCVPTV 660 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 IL + AC ++ G ++ E L+ ++ + N +C HGRP+ + + Sbjct: 661 FHEILNSKACRSAVMFGDELTRQECIILISKLSRCHNPFECAHGRPSMVPI 711 >gi|313637913|gb|EFS03231.1| DNA mismatch repair protein MutL [Listeria seeligeri FSL S4-171] Length = 215 Score = 264 bits (675), Expect = 3e-68, Method: Composition-based stats. Identities = 88/218 (40%), Positives = 131/218 (60%), Gaps = 8/218 (3%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 M I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I D Sbjct: 1 MTKNIVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIID 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG G+ E++ A RH TSKI + D +HT GFRGEALPSI +VSHLTL + + Sbjct: 61 NGSGIEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLTLETST-GES 119 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 G I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A Sbjct: 120 KGTTISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLA 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIG 214 +A+P +SF FS + + NG+ + I+ + G Sbjct: 180 LAHPNISFRFSHNGKP---LLQTNGNGDLRQVIAAIYG 214 >gi|309807406|ref|ZP_07701369.1| putative DNA mismatch repair protein [Lactobacillus iners LactinV 01V1-a] gi|308169328|gb|EFO71383.1| putative DNA mismatch repair protein [Lactobacillus iners LactinV 01V1-a] Length = 246 Score = 263 bits (673), Expect = 4e-68, Method: Composition-based stats. Identities = 87/248 (35%), Positives = 131/248 (52%), Gaps = 6/248 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KLS ++ NQIAAGE+IERP+ IKEL EN+LDA S+R++ G + DNG Sbjct: 3 KIHKLSSELTNQIAAGEVIERPASVIKELCENALDAGSTRIKIDFIDAGLKQIMVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++EI +A RH TSKI+ D NI T GFRGEAL SI AV+ + +++ G Sbjct: 63 GIAADEIDLAFMRHATSKINTNHDLFNIATLGFRGEALASIAAVAKVDIVTNT-GGVNGI 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A GT + VRDLF PARL +LKSE+ E I D++ R+A+ Y Sbjct: 122 HAIFEDGNKVKQEAIASPQGTKIVVRDLFHNTPARLKYLKSERTEIMKIVDIVNRLALGY 181 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P+VSF + + + ++ + + + + + + G + + +S + + G Sbjct: 182 PQVSFELT---NRQKQLLKTTGHDDLRQTAANIYGIKVAEKMLAIYAQSPDFKIAGLISR 238 Query: 240 PTFNRGNA 247 R Sbjct: 239 ADDTRSTR 246 >gi|163781651|ref|ZP_02176651.1| DNA mismatch repair protein MutL [Hydrogenivirga sp. 128-5-R1-1] gi|159882871|gb|EDP76375.1| DNA mismatch repair protein MutL [Hydrogenivirga sp. 128-5-R1-1] Length = 428 Score = 263 bits (673), Expect = 5e-68, Method: Composition-based stats. Identities = 119/445 (26%), Positives = 192/445 (43%), Gaps = 23/445 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M ++ L ++ ++IAAGE+IE P+ +KEL+ENSLDA ++RVE I+ GGK + DNG Sbjct: 1 MFVKILPHQVRSKIAAGEVIESPADVVKELVENSLDANATRVEVDISKGGKRLILVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+I V TSKI D NI ++GFRGEAL SI +VS LT+ SR Q G Sbjct: 61 TGIHPEDIDKVVLEGATSKIGSEKDLMNISSYGFRGEALYSIASVSRLTIRSRYFQEKEG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ + G ++ S V M GT VEVRDLFF +PAR FLK E E + ++IR A+A Sbjct: 121 YEVEVEGGEVVSKSKVGMPVGTEVEVRDLFFNLPARRKFLKREDTERRRVINLIREYALA 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P V F + + S + + + + + + L+ Y Sbjct: 181 NPDVGFILFSNAREVLNLRPASERERAEDVLGE--------RLEPIRGEREFLRLRAYVK 232 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 + +F++F+N R V K + +R G + V+ LE+ P VD N Sbjct: 233 RN----VSRGEFHLFVNSRPVSSKGMKDFLRKTL------GYKTLGVVFLELPPFMVDFN 282 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 VHP K ++F + + + + + + L + Sbjct: 283 VHPKKREVKFLKERKVLALMRSMLGGRETEFFTLEQEIAPYETEFRILGQLNDTVILAQR 342 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 L + L + R + L + ++ E + ++ + Sbjct: 343 GDYLYFFDQHLISE--RANYEKLKGKPEADQIACRSAIKSGEKLSEKEMKELVELWKGLE 400 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKM 443 + + H + I+EK+ Sbjct: 401 NPHVCPHGRPI-YYRLHIKDIYEKL 424 Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 30/55 (54%) Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC +I+SG K+ EM L+ + N C HGRP + +L + DI + GR Sbjct: 372 IACRSAIKSGEKLSEKEMKELVELWKGLENPHVCPHGRPIYYRLHIKDIYEKLGR 426 Score = 38.1 bits (87), Expect = 4.4, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 1/86 (1%) Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 +E+ A + Q++ I++Q D L DQH ER +EK++ + +I + Sbjct: 316 LEQEIAPYETEFRILGQLNDTVILAQRGDYLYFFDQHLISERANYEKLKGKPEADQIACR 375 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLH 481 + + L E E ++E + L Sbjct: 376 SAIKSGE-KLSEKEMKELVELWKGLE 400 >gi|3914082|sp|P70754|MUTL_AQUPY RecName: Full=DNA mismatch repair protein mutL gi|1575784|gb|AAB09595.1| DNA mismatch repair protein [Aquifex pyrophilus] Length = 426 Score = 263 bits (671), Expect = 7e-68, Method: Composition-based stats. Identities = 111/321 (34%), Positives = 165/321 (51%), Gaps = 20/321 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M ++ L ++ +IAAGE+I+ P +KELIENSLDA+++R+E + GGK ++ DNG Sbjct: 1 MFVKILPPEVRRKIAAGEVIDAPVDVVKELIENSLDAKATRIEIEVVKGGKRLIRVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+I V TSKI D N+ T+GFRGEAL SI +VS L SR Q G Sbjct: 61 IGIHPEDIEKVVLSGATSKIEKETDLLNVETYGFRGEALYSISSVSKFRLRSRFYQEKEG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +I + G + SVR V M GT VEV DLFF +PAR FL+ E E IT++++ AI Sbjct: 121 REIEVEGGTLKSVRRVGMEVGTEVEVYDLFFNLPARKKFLRKEDTERRKITELVKEYAIT 180 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 P+V F + + + + I E F + E + + I ++ + Sbjct: 181 NPQVDFHLFSEGKETLNLK--------KKDLKGRIEEIFESIFEEESSEREGIKVRAFIS 232 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 ++Y+F+N R V +K + ++ + G +VVL ++I P VD N Sbjct: 233 RN----QKRGKYYLFVNSRPVYNKNLKEYLKKTF------GYKTIVVLFIDIPPFLVDFN 282 Query: 299 VHPAKSYIRFRNPTIIRNFII 319 VHP K ++F I I Sbjct: 283 VHPKKKEVKFLKERKIYELIR 303 Score = 81.6 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 34/55 (61%) Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +AC S+++G K+ + ++ L++E +K N C HGRP + KL L ++ + GR Sbjct: 370 LACRISVKAGEKLTNEKIKELIKEWKKLENPHVCPHGRPIYYKLPLKEVYEKLGR 424 >gi|288817735|ref|YP_003432082.1| DNA mismatch repair protein [Hydrogenobacter thermophilus TK-6] gi|288787134|dbj|BAI68881.1| DNA mismatch repair protein [Hydrogenobacter thermophilus TK-6] gi|308751334|gb|ADO44817.1| DNA mismatch repair protein MutL [Hydrogenobacter thermophilus TK-6] Length = 425 Score = 263 bits (671), Expect = 9e-68, Method: Composition-based stats. Identities = 111/321 (34%), Positives = 172/321 (53%), Gaps = 19/321 (5%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTS 65 L E++I++I+AGE+IE P+ +KEL+EN+LDA SSR++ + GGK + + DNG G+ Sbjct: 6 LPEEVISKISAGEVIESPADCVKELVENALDASSSRIDVEMLKGGKRYICVRDNGTGIHR 65 Query: 66 EEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAI 123 E++ VQR TSKI D D +I ++GFRGEAL +I VS + + SR Q+ G ++ + Sbjct: 66 EDVHKVVQRWTTSKIKDMSDLMSISSYGFRGEALYAISTVSKMIIKSRFFQDEIGIKMEV 125 Query: 124 SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 G K+ + + + M GT VEV DLF+ +P RL FLK E E N I +I+ A++ V Sbjct: 126 EGGKVINKQEIGMPVGTCVEVYDLFYNLPVRLKFLKKEDTERNKIIKLIKEYALSNWNVH 185 Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFN 243 FT + + + ERI + G F ++E N + + T Sbjct: 186 FTLHSNGRKVLDLY---PCEDKKERIEALFGCKFEEKSIEKNSIN--------ISLYTSL 234 Query: 244 RGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAK 303 + + Y+F+N R V +K +L IR G + V +++ P VDVNVHP K Sbjct: 235 ESSRGEIYLFVNSRPVHNKNLLEYIRKVV------GYKKICVCYIDLPPYMVDVNVHPKK 288 Query: 304 SYIRFRNPTIIRNFIIQSIQK 324 +R II+ I + ++ Sbjct: 289 REVRIYKENIIKEMIKELFRR 309 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 26/51 (50%) Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 +C +I++G+ + E L++ N C HGRP + +L L DI K Sbjct: 369 RSCAFAIKAGKAISKEEAKELVKAWMSLENREVCPHGRPMYYRLYLGDIYK 419 >gi|255017940|ref|ZP_05290066.1| DNA mismatch repair protein [Listeria monocytogenes FSL F2-515] Length = 222 Score = 263 bits (671), Expect = 9e-68, Method: Composition-based stats. Identities = 85/222 (38%), Positives = 130/222 (58%), Gaps = 6/222 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ A RH TSKI + D +HT GFRGEALPSI +VSHL + + G Sbjct: 65 IEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALPSIASVSHLAMETST-GETKGTS 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I++ G KI + GT +EV LFF PARL +LKS E ITD++ R+A+A+P Sbjct: 124 ISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKYLKSLPTELGNITDILNRLALAHP 183 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV 222 +SF FS + + NG+ + I+ + G ++ Sbjct: 184 DISFRFSHNGKP---LLQTNGNGDLRQVIAAIYGISIAKKSI 222 >gi|190407796|gb|EDV11061.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi|256274239|gb|EEU09147.1| Mlh3p [Saccharomyces cerevisiae JAY291] gi|323331172|gb|EGA72590.1| Mlh3p [Saccharomyces cerevisiae AWRI796] Length = 715 Score = 262 bits (670), Expect = 1e-67, Method: Composition-based stats. Identities = 117/711 (16%), Positives = 238/711 (33%), Gaps = 134/711 (18%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL + ++ + + A++E+++NS+DA ++ ++ +I SF + D+G G Sbjct: 5 IRKLDSNVSERLKSQACTVSLASAVREIVQNSVDAHATTIDVMIDLPNLSF-AVYDDGIG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 +T ++ + ++ TSKI +D + T+G+RG+AL SI VS+L + S+ N+ Sbjct: 64 LTRSDLNILATQNYTSKIRKMNDLVTMKTYGYRGDALYSISNVSNLFVCSKKKDYNSAWM 123 Query: 121 IAISGEKISSVRPVAMN--------------PGTIVEVRDLFFTIPARLNFLK--SEQVE 164 + + + GT+V V D+ + +P R LK Sbjct: 124 RKFPSKSVMLSENTILPIDPFWKICAWSRTKSGTVVIVEDMLYNLPVRRRILKEEPPFKT 183 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNF----------QSTNGNFPERISQVIG 214 N I + ++ + +P +S R + + + + V G Sbjct: 184 FNTIKADMLQILVMHPMISLNVQYTDKLRINTEVLFRSKNITEGLTKHQQMSQVLRNVFG 243 Query: 215 EDFINNAVELNE-KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIR---- 269 + ++ K NE ++G + +++INGR D + Sbjct: 244 AIIPPDMLKKVSLKFNEYQIEGIISKMPV--RLKDLQFIYINGRRYADSAFQGYVDSLFQ 301 Query: 270 -----TAYAETI-------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 + P +PV +L + D+ PAK ++ + I Sbjct: 302 AQDFGEKGMSLLKTKSVGKPYRSHPVFILDVRCPQTIDDLLQDPAKKIVKPSHIRTIEPL 361 Query: 318 IIQSIQKAI--------------------------------------------------N 327 I+++I+ + N Sbjct: 362 IVKTIRSFLTFQGYLTPDKSDSSFEIVNCSQKTATLPDSRIQISKRNQVLNSKMKIARIN 421 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + S+ + + + + L N D + Sbjct: 422 SYIGKPVVNGCRINNSTINYEKIKNIRIDGQKSRLRNKLSSRPYDSGFTEDYDSIGKTIT 481 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 +S + + E + I LV+VDQHA ER+ E++ Sbjct: 482 DFSISRSVLAKYEVINQVDKKFI-LIRCLDQSIHNCPLLVLVDQHACDERIRLEELFYSL 540 Query: 448 NSTKIT---SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN----AIAIREI 500 + +T L I++ E L + + + GI E + I+ + Sbjct: 541 LTEVVTGTFVARDLKDCCIEVDRTEADLFKHYQSEFKKWGIGYETIEGTMETSLLEIKTL 600 Query: 501 PAILSK--------------------KNIPQLLRDI--------IDEIIDSSTTYTLQDR 532 P +L+ K+ +L D+ +D++ + + Sbjct: 601 PEMLTSKYNGDKDYLKMVLLQHAHDLKDFKKLPMDLSHFENYTSVDKLYWWKYSSCVPTV 660 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 IL + AC ++ G ++ E L+ ++ + N +C HGRP+ + + Sbjct: 661 FHEILNSKACRSAVMFGDELTRQECIILISKLSRCHNPFECAHGRPSMVPI 711 >gi|71991825|ref|NP_499796.2| MLH (MutL Homolog) family member (mlh-1) [Caenorhabditis elegans] gi|33668505|emb|CAB07283.2| C. elegans protein T28A8.7, confirmed by transcript evidence [Caenorhabditis elegans] Length = 758 Score = 262 bits (670), Expect = 1e-67, Method: Composition-based stats. Identities = 108/427 (25%), Positives = 189/427 (44%), Gaps = 20/427 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L + ++N++AAGE++ RP AIKEL+ENSLDA ++ + + GG Q++DNG G Sbjct: 4 IQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDNGKG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ + +R TSK+ +D ++ T+GFRGEAL S+ V+ + ++S+ Q Sbjct: 64 IEREDFALVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRADAKCAYQ 123 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 K++ +P A GT + DLF+ +P R N + + E ++ D + R AI Sbjct: 124 ANFLDGKMTADTKPAAGKNGTCITATDLFYNLPTRRNKMTTHGEEAKMVNDTLLRFAIHR 183 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE--LNEKSNEITLQGYT 237 P VSF ++ ++ +GNF + + ++G D + + LN + T G+ Sbjct: 184 PDVSFALRQNQAGDFRTK---GDGNFRDVVCNLLGRDVADTILPLSLNSTRLKFTFTGHI 240 Query: 238 GIPTFN---------RGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL 288 P + + + + F VFINGR+V+ + I + L L Sbjct: 241 SKPIASATAAIAQNRKTSRSFFSVFINGRSVRCDILKHPIDEVLGARQLHAQ--FCALHL 298 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 +ID ++DVNVHP K+ + F I I +K I + + + K + Sbjct: 299 QIDETRIDVNVHPTKNSVIFLEKEEIIEEIRAYFEKVIGEIFGFEALDVEKPEEEQPDIE 358 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 N + + S+ K + S+ SD + E + Sbjct: 359 NLVMIPMSQSLKSI-EAIRKPDTKPEFKSSPSAWKSDKKRVDYMEVRTDAKERKIDEFVT 417 Query: 409 ACAQIHQ 415 + Sbjct: 418 RGGAVGP 424 >gi|323302694|gb|EGA56500.1| Mlh3p [Saccharomyces cerevisiae FostersB] Length = 715 Score = 262 bits (670), Expect = 1e-67, Method: Composition-based stats. Identities = 118/711 (16%), Positives = 239/711 (33%), Gaps = 134/711 (18%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL + ++ + + A++E+++NS+DA ++ ++ +I SF + D+G G Sbjct: 5 IRKLDSNVSERLKSQACTVSLASAVREIVQNSVDAHATTIDVMIDLPNLSF-AVYDDGIG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 +T ++ + ++ TSKI +D + T+G+RG+AL SI VS+L + S+ N+ Sbjct: 64 LTRSDLNILATQNYTSKIRKMNDLVTMKTYGYRGDALYSISNVSNLFVCSKKKDYNSAWM 123 Query: 121 IAISGEKISSVRPVAMN--------------PGTIVEVRDLFFTIPARLNFLKSEQVE-- 164 + + + GT+V V D+ + +P R LK E Sbjct: 124 RKFPSKSVMLSENTILPIDPFWKICAWSRTKSGTVVIVEDMLYNLPVRRRILKEEPPFKA 183 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNF----------QSTNGNFPERISQVIG 214 N I + ++ + +P +S R + + + + V G Sbjct: 184 FNTIKXDMLQILVMHPMISLNVQYTDKLRINTEVLFRSKNITEGLTKHQQMSQVLRNVFG 243 Query: 215 EDFINNAVELNE-KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIR---- 269 + ++ K NE ++G + +++INGR D + Sbjct: 244 AIIPPDMLKKVSLKFNEYQIEGIISKMPV--RLKDLQFIYINGRRYADSAFQGYVDSLFQ 301 Query: 270 -----TAYAETI-------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 + P +PV +L + D+ PAK ++ + I Sbjct: 302 AQDFGEKGMSLLKTKSVGKPYRSHPVFILDVRCPQTIDDLLQDPAKKIVKPSHIRTIEPL 361 Query: 318 IIQSIQKAI--------------------------------------------------N 327 I+++I+ + N Sbjct: 362 IVKTIRSFLTFQGYLTPDKSDSSFEIVNCSQKTATLPDSRIQISKRNQVLNSKMKIARIN 421 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + S+ + + + + L N D + Sbjct: 422 SYIGKPVVNGCRINNSTINYEKIKNIRIDGQKSRLRNKLSSRPYDSGFTEDYDSIGKTIT 481 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 +S + + E + I LV+VDQHA ER+ E++ Sbjct: 482 DFSISRSVLXKYEVINQVDKKFI-LIRCLDQSIHNCPLLVLVDQHACDERIRLEELFCSL 540 Query: 448 NSTKIT---SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN----AIAIREI 500 + +T L I++ E L + + + GI E + I+ + Sbjct: 541 LTEVVTGTFVARDLKDCCIEVDRTEADLFKHYQSEFKKWGIGYETIEGTMETSLLEIKTL 600 Query: 501 PAILSK--------------------KNIPQLLRDI--------IDEIIDSSTTYTLQDR 532 P +L+ K+ +L D+ +D++ + + Sbjct: 601 PEMLTSKYNGDKDYLKMVLLQHAHDLKDFKKLPMDLSHFENYTSVDKLYWWKYSSCVPTV 660 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 IL + AC ++ G ++ E L+ ++ + N +C HGRP+ + + Sbjct: 661 FHEILNSKACRSAVMFGDELTRQECIILISKLSRCHNPFECAHGRPSMVPI 711 >gi|207340650|gb|EDZ68936.1| YPL164Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 715 Score = 262 bits (669), Expect = 1e-67, Method: Composition-based stats. Identities = 117/711 (16%), Positives = 238/711 (33%), Gaps = 134/711 (18%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL + ++ + + A++E+++NS+DA ++ ++ +I SF + D+G G Sbjct: 5 IRKLDSNVSERLKSQACTVSLASAVREIVQNSVDAHATTIDVMIDLPNLSF-AVYDDGIG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 +T ++ + ++ TSKI +D + T+G+RG+AL SI VS+L + S+ N+ Sbjct: 64 LTRSDLNILATQNYTSKIRKMNDLVTMKTYGYRGDALYSISNVSNLFVCSKKKDYNSAWM 123 Query: 121 IAISGEKISSVRPVAMN--------------PGTIVEVRDLFFTIPARLNFLK--SEQVE 164 + + + GT+V V D+ + +P R LK Sbjct: 124 RKFPSKSVMLSENTILPIDPFWKICAWSRTKSGTVVIVEDMLYNLPVRRRILKEEPPFKT 183 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNF----------QSTNGNFPERISQVIG 214 N I + ++ + +P +S R + + + + V G Sbjct: 184 FNTIKADMLQILVMHPMISLNVQYTDKLRINTEVLFRSKNITEGLTKHQQMSQVLRNVFG 243 Query: 215 EDFINNAVELNE-KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIR---- 269 + ++ K NE ++G + +++INGR D + Sbjct: 244 AIIPPDMLKKVSLKFNEYQIEGIISKMPV--RLKDLQFIYINGRRYADSAFQGYVDSLFQ 301 Query: 270 -----TAYAETI-------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 + P +PV +L + D+ PAK ++ + I Sbjct: 302 AQDFGEKGMSLLKTKSMGKPYRSHPVFILDVRCPQTIDDLLQDPAKKIVKPSHIRTIEPL 361 Query: 318 IIQSIQKAI--------------------------------------------------N 327 I+++I+ + N Sbjct: 362 IVKTIRSFLTFQGYLTPDKSDSSFEIVNCSQKTATLPDSRIQISKRNQVLNSKMKIARIN 421 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + S+ + + + + L N D + Sbjct: 422 SYIGKPVVNGCRINNSTINYEKIKNIRIDGQKSRLRNKLSSRPYDSGFTEDYDSIGKTIT 481 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 +S + + E + I LV+VDQHA ER+ E++ Sbjct: 482 DFSISRSVLAKYEVINQVDKKFI-LIRCLDQSIHNCPLLVLVDQHACDERIRLEELFYSL 540 Query: 448 NSTKIT---SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN----AIAIREI 500 + +T L I++ E L + + + GI E + I+ + Sbjct: 541 LTEVVTGTFVARDLKDCCIEVDRTEADLFKHYQSEFKKWGIGYETIEGTMETSLLEIKTL 600 Query: 501 PAILSK--------------------KNIPQLLRDI--------IDEIIDSSTTYTLQDR 532 P +L+ K+ +L D+ +D++ + + Sbjct: 601 PEMLTSKYNGDKDYLKMVLLQHAHDLKDFKKLPMDLSHFENYTSVDKLYWWKYSSCVPTV 660 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 IL + AC ++ G ++ E L+ ++ + N +C HGRP+ + + Sbjct: 661 FHEILNSKACRSAVMFGDELTRQECIILISKLSRCHNPFECAHGRPSMVPI 711 >gi|297809903|ref|XP_002872835.1| hypothetical protein ARALYDRAFT_490319 [Arabidopsis lyrata subsp. lyrata] gi|297318672|gb|EFH49094.1| hypothetical protein ARALYDRAFT_490319 [Arabidopsis lyrata subsp. lyrata] Length = 923 Score = 261 bits (668), Expect = 2e-67, Method: Composition-based stats. Identities = 94/367 (25%), Positives = 176/367 (47%), Gaps = 12/367 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR ++ +I++I +G++I S A+KEL+ENSLDA ++ +E + G+ +FQ+ DNG G Sbjct: 17 IRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGEDYFQVIDNGCG 76 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ + +H TSK+ D D N+ T+GFRGEAL S+ A+ +LT+ +R Sbjct: 77 ISPTNFKVLALKHHTSKLEDFTDLLNLTTYGFRGEALSSLCALGNLTVETRTKNEPVATL 136 Query: 121 IAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + +++ + +A GT V VR LF +P R F ++ + E + ++ A+ Sbjct: 137 LTFDHSGLLTAEKKIARQIGTTVTVRKLFSNLPVRSKEFKRNIRKEYGKLVSLLNAYALI 196 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN-EKSNEITLQG 235 V F S K+ + + G+ + I V G + + ++ S + ++G Sbjct: 197 AKGVRFVCSNTSGKNPKSIVLNTQGRGSLKDNIITVFGMNTFTSLQPVSICISEDCRVEG 256 Query: 236 YTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 + P R A++ Y FINGR V+ + + Y +T +YPV +L + Sbjct: 257 FLSKPGQGTGRNLADRQYFFINGRPVEMPKVSKLVNELYKDT-SSRKYPVAILDFVVPGG 315 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 D+NV P K + F + + + + + + + S ++++ +S D A + Sbjct: 316 ACDLNVTPDKRKVFFSDENSVIGSLREGLNEIYSSSN--ASYIVNRFEENSEQPDKAGVS 373 Query: 354 HLPKYAT 360 + + Sbjct: 374 SFQEKSN 380 Score = 146 bits (369), Expect = 9e-33, Method: Composition-based stats. Identities = 48/198 (24%), Positives = 82/198 (41%), Gaps = 20/198 (10%) Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 ++ Q + +II++ L IVDQHAA E+ FE + ST + Q LL P Sbjct: 705 DFRRMQVLGQFNLGFIIAKLERDLFIVDQHAADEKFNFEHL---ARSTVLNQQPLLQPLN 761 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERF----GPNAIAIREIPAILSKKNIPQLLRDIID 518 ++L E ++ H + + G E +R +P + + L+D+I Sbjct: 762 LELSPEEEVTVLMHMDIIRENGFLLEENPSAPAGKHFRLRAVPYSKNITFGVEDLKDLIS 821 Query: 519 EIIDS-------------STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 + D+ T R+ +LA+ AC S+ G ++ EM +++ + Sbjct: 822 TLGDNHGECSGVSSYKTSKTDSICPSRVRAMLASRACRSSVMIGDPLRKNEMQKIVEHLA 881 Query: 566 KNPNSSQCNHGRPTFIKL 583 + C HGRPT L Sbjct: 882 DLESPWNCPHGRPTMRHL 899 >gi|19112991|ref|NP_596199.1| MutL family protein Mlh1 (predicted) [Schizosaccharomyces pombe 972h-] gi|48474996|sp|Q9P7W6|MLH1_SCHPO RecName: Full=Putative MutL protein homolog 1; AltName: Full=DNA mismatch repair protein MLH1 gi|6723918|emb|CAB66448.1| MutL family protein Mlh1 (predicted) [Schizosaccharomyces pombe] Length = 684 Score = 261 bits (668), Expect = 2e-67, Method: Composition-based stats. Identities = 116/413 (28%), Positives = 191/413 (46%), Gaps = 18/413 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L + +IN+IAAGEIIERP AIKELIENSLDA S+ ++ ++ GG QITDNG Sbjct: 8 KIRPLDQLVINKIAAGEIIERPENAIKELIENSLDAGSTSIDVLLKDGGLKLLQITDNGS 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++P QR TSKI +D ++ TFGFRGEAL SI V+ +T++++ + Sbjct: 68 GIQYDDLPYLCQRFSTSKIDNFNDLQHLQTFGFRGEALASISHVAKVTVVTKLSSDIHAW 127 Query: 120 QIAI--------SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S + +P A GT++ DLF+ + +R + LK+ E I + Sbjct: 128 KAFYVDGALAPISPGMSPAPQPCAGKQGTVITAEDLFYNVRSRKSALKNGSEEFRRIMIL 187 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV-----ELNE 226 +++ AI +VSF + ++ S ++I + G ++ E Sbjct: 188 VQKYAIHNDQVSFNCKKVGDTVASLSLSSRLSK-ADKIRHIYGPRVASHLRDFSLGEGQS 246 Query: 227 KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 + G+ F +N +FIN R V+ + + YA+ + G V L Sbjct: 247 SIVGFSANGFISNADFQDKKSNLI-LFINNRLVESVELRHALEETYAKYLHKGASYFVYL 305 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH 346 L + P Q+DVNVHP+K + F I I + + + + S L + MI S Sbjct: 306 SLNMSPEQLDVNVHPSKRIVHFLYDQEIATSICDKLGEILERTDTERSYPL-QAMIPSIS 364 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 ++ K + N + +E + + + + ++ + E Sbjct: 365 NTKNAESSSQKAVRTYENYLVRTDPRERSIKSMLSDNFLQRSSNNYDNEIIEK 417 >gi|93006321|ref|YP_580758.1| ATP-binding region, ATPase-like [Psychrobacter cryohalolentis K5] gi|92393999|gb|ABE75274.1| DNA mismatch repair protein MutL [Psychrobacter cryohalolentis K5] Length = 580 Score = 261 bits (668), Expect = 2e-67, Method: Composition-based stats. Identities = 117/520 (22%), Positives = 219/520 (42%), Gaps = 42/520 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+KLS +INQ+AAGE++ RP+ +KEL+EN++DA ++ +E I GG ++ DNG Sbjct: 9 RIKKLSPLLINQLAAGEVVTRPAAVVKELLENAIDAHATDIEVRITQGGMGMIEVIDNGV 68 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ MAV RH TSK++D I T GFRGEAL + AVS LTL S + G Sbjct: 69 GIHPDDMVMAVTRHATSKVADVAHLHGITTLGFRGEALAATAAVSRLTLTSSHNDSGIGR 128 Query: 120 QIAISGE--KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++G + PV + GT + V+DL+F +PAR LKS E + I ++R +A+ Sbjct: 129 QLQVAGILGDTPKLIPVVHHRGTTITVKDLYFNVPARRGNLKSIATEFSHIETIVREVAL 188 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPER-----ISQVIGEDFINNAVELNEKSNEIT 232 A V+ T R ++ + N + + Q G A+E+ + +T Sbjct: 189 ARADVALTLFHDNKKRLSLSVNTINKVTEKYLPLSRLEQATGLALAEQAIEIAVDLSSLT 248 Query: 233 LQGYTG-----IPTFNRGNANQFY--------------------VFINGRTVQDKFILST 267 Q + + +++NGR V++ I + Sbjct: 249 QQFGSSSATNANGEYADNVRTMQAASIGGWLWASYDANHSLPKLIYVNGRLVKEALISNQ 308 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 +R G L E+ + ++VNVHP+K I+ I + +I+ + Sbjct: 309 LRQMVQSVQLAG--MGYALYFELPTQWLNVNVHPSKQRIKISPLNNIMAHLSHAIRAKLR 366 Query: 328 KKGISTSSVLSKKMIS---SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 + ++ + S + + Y + T +Q+ ++ + + Sbjct: 367 GLNTAKIVRSKERAPNDNISTRKSFNALDAIASYTNNATASQQVQAPKQPYQLSENESLF 426 Query: 385 DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD-QHAAHERLIFEKM 443 + ++PVE+S + + + + GLV ++ ++ + + Sbjct: 427 ESIKDLHIDEPVEDSRHAVNSYPVNTPPLPVCLQVIDSVTGLVASSVIYSNDDKALPWLL 486 Query: 444 RQDFNSTKITSQTLLTPEIIDL--LEGECALIMEHDEDLH 481 + S + L + + + ++L+ Sbjct: 487 FYYQGQCALISAERWQSRLKVLFESSVFSSTMYDKAKELN 526 >gi|18411951|ref|NP_567236.1| PMS1 (POSTMEIOTIC SEGREGATION 1); ATP binding / mismatched DNA binding [Arabidopsis thaliana] gi|15617225|gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gi|332656775|gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] Length = 923 Score = 261 bits (666), Expect = 3e-67, Method: Composition-based stats. Identities = 96/367 (26%), Positives = 174/367 (47%), Gaps = 12/367 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR ++ +I++I +G++I S A+KEL+ENSLDA ++ +E + G+ +FQ+ DNG G Sbjct: 17 IRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGEDYFQVIDNGCG 76 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ + +H TSK+ D D N+ T+GFRGEAL S+ A+ +LT+ +R Sbjct: 77 ISPTNFKVLALKHHTSKLEDFTDLLNLTTYGFRGEALSSLCALGNLTVETRTKNEPVATL 136 Query: 121 IAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + +++ + A GT V VR LF +P R F ++ + E + ++ A+ Sbjct: 137 LTFDHSGLLTAEKKTARQIGTTVTVRKLFSNLPVRSKEFKRNIRKEYGKLVSLLNAYALI 196 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN-EKSNEITLQG 235 V F S K+ + + G+ + I V G + ++ S + ++G Sbjct: 197 AKGVRFVCSNTTGKNPKSVVLNTQGRGSLKDNIITVFGISTFTSLQPVSICVSEDCRVEG 256 Query: 236 YTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 + P R A++ Y FINGR V + + Y +T +YPV +L + Sbjct: 257 FLSKPGQGTGRNLADRQYFFINGRPVDMPKVSKLVNELYKDT-SSRKYPVTILDFIVPGG 315 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 D+NV P K + F + T + + + + + + S ++++ +S D A + Sbjct: 316 ACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSSN--ASYIVNRFEENSEQPDKAGVS 373 Query: 354 HLPKYAT 360 K + Sbjct: 374 SFQKKSN 380 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 20/198 (10%) Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 ++ Q + +II++ L IVDQHAA E+ FE + ST + Q LL P Sbjct: 701 DFRRMQVLGQFNLGFIIAKLERDLFIVDQHAADEKFNFEHL---ARSTVLNQQPLLQPLN 757 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFG----PNAIAIREIPAILSKKNIPQLLRDIID 518 ++L E ++ H + + G E +R IP + + L+D+I Sbjct: 758 LELSPEEEVTVLMHMDIIRENGFLLEENPSAPPGKHFRLRAIPYSKNITFGVEDLKDLIS 817 Query: 519 EIIDS-------------STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 + D+ T R+ +LA+ AC S+ G ++ EM +++ + Sbjct: 818 TLGDNHGECSVASSYKTSKTDSICPSRVRAMLASRACRSSVMIGDPLRKNEMQKIVEHLA 877 Query: 566 KNPNSSQCNHGRPTFIKL 583 + C HGRPT L Sbjct: 878 DLESPWNCPHGRPTMRHL 895 >gi|167825658|ref|ZP_02457129.1| DNA mismatch repair protein [Burkholderia pseudomallei 9] Length = 245 Score = 261 bits (666), Expect = 3e-67, Method: Composition-based stats. Identities = 81/223 (36%), Positives = 127/223 (56%), Gaps = 9/223 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN+LDA + + ++ GG ITD+G G Sbjct: 30 IQPLPDQLISQIAAGEVVERPASVVKELVENALDAGAGTLRILLDEGGVKRISITDDGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++E+P+A+ RH TSKI + + T GFRGEAL SI +V+ + + SR + Sbjct: 90 IPADELPLALMRHATSKIRSLAELEAVATLGFRGEALASIASVAEMFITSRTEDAAHATR 149 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I + V P A GT +EVR+L+F+ PAR FLKSEQ E ++IRR A+A P Sbjct: 150 I---DAQTGVVGPAAGTRGTTIEVRELYFSTPARRKFLKSEQTEFGHCLEMIRRAALARP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE 223 V+ + N R+++++G+ F + Sbjct: 207 DVAISVLHNGRAVEHWNASEPAA----RVAKILGDGFATAHLP 245 >gi|260812020|ref|XP_002600719.1| hypothetical protein BRAFLDRAFT_83461 [Branchiostoma floridae] gi|229286008|gb|EEN56731.1| hypothetical protein BRAFLDRAFT_83461 [Branchiostoma floridae] Length = 1072 Score = 261 bits (666), Expect = 3e-67, Method: Composition-based stats. Identities = 93/380 (24%), Positives = 173/380 (45%), Gaps = 23/380 (6%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L +++ +I +KEL+ENSLDA+++ V+ + G ++DNG G+ Sbjct: 12 QALPAATARLLSSTLVITSVFSVVKELVENSLDAQATSVDVKLESFGFDRIVVSDNGSGI 71 Query: 64 TSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + QRH TSK+S D ++ T+GFRGEAL S+ AV+ +T+ ++ ++ Sbjct: 72 SRADAEFMAQRHYTSKLSHQADLDSLETYGFRGEALGSLCAVADVTVTTKTAADDFSMIY 131 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + + KI++ +P + GT + V +LF +P R + K + E + D++ + + Sbjct: 132 TLDRQGKITNSKPAHLGQGTTITVTNLFKNVPVRRQYYSAPKRRKEELKRVEDIMMALGV 191 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFIN--NAVELNEKSNEITLQG 235 P V F+ K ++ N + + V+G + VE ++ +QG Sbjct: 192 IKPDVRFSLIHNKCTVWQKNKYP---DHRTALRTVLGTGTMALLQGVEHRNVEPQVDVQG 248 Query: 236 YTGIP-----TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG---RYPVVVLL 287 + P R ++ +VF N R VQ K + +R Y + G R+P++ L Sbjct: 249 FLPKPGADPQAVTRATTDRSFVFFNERPVQMKGVEKLVRQYYHGSTSDGASSRHPIIFLS 308 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 +++ P ++D NV P K+ + N I + I ++ + S+ K S + Sbjct: 309 IKVPPAEIDPNVEPNKTKVLLHNNDSILSVI----EEMLQTVYSSSDDANHSKATSEEAR 364 Query: 348 DNAPKTHLPKYATSLTNTQE 367 D K+ + NT E Sbjct: 365 DTTHKSTSSSDSNKQQNTLE 384 >gi|256072195|ref|XP_002572422.1| DNA mismatch repair protein MLH1 [Schistosoma mansoni] gi|238657580|emb|CAZ28653.1| DNA mismatch repair protein MLH1, putative [Schistosoma mansoni] Length = 918 Score = 260 bits (665), Expect = 4e-67, Method: Composition-based stats. Identities = 123/534 (23%), Positives = 211/534 (39%), Gaps = 56/534 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I++L +++IN+IAAGE+I+RP AIKEL+ENS+DA S+ ++ + GG Q+ DNG Sbjct: 28 TIKRLPKEVINRIAAGEVIQRPVNAIKELLENSIDAGSTMIKITVKDGGLKLIQVQDNGC 87 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++P+ +R TSK+ + D S I TFGFRGEAL S+ V+ +T+ +R N Sbjct: 88 GIHQSDLPILCERFTTSKLKEFSDLSKISTFGFRGEALSSLSHVALVTVTTRTANQNCAF 147 Query: 120 Q-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + +G S P A NPGT + +LF+ P R + LK+ + E + +T+V+ + AI Sbjct: 148 KVKYRAGVAESKPVPCAGNPGTTIVAENLFYNAPIRKSALKNGREELSKVTEVVAQYAIH 207 Query: 179 Y-PKVSFTFSTI----KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE------- 226 Y + F + KS+ + S + + I VIG N + Sbjct: 208 YAQQCGFHLHSESATGKSSIEQDLRTSAGWSRMDAIRAVIGSSIEQNLISFTSSQCSSSE 267 Query: 227 ------KSNEITLQGYTGIPT---FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP 277 + + +G P + + +FIN R V I + AY+ I Sbjct: 268 STRLAIERYGLRYEGLLTAPNQVSSGCSPSLKLNLFINNRLVSCTPIKRIVECAYSSVIS 327 Query: 278 LG--------------------------------RYPVVVLLLEIDPRQVDVNVHPAKSY 305 G V L +++ +DVNVHP K+ Sbjct: 328 RGLSSNSTDHQAVLTNKKFKISTNSNIMYKSSTFNSLYVYLNIQLPVHTLDVNVHPTKAE 387 Query: 306 IRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNT 365 + F + I N + ++++A+ + V + ++ +T N Sbjct: 388 VNFLHEDEIVNGLQDAVEQALLSSAQIQTFVRNCLPTPITFKNPKELNTHNDRSTDRPNE 447 Query: 366 QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG 425 + ++ L+E +L S+ + +E + I + + Sbjct: 448 KVRIDLREQQLERFLSPQSNYMNNNMACSKLERLHNNSLKKSIGEMSPDIEVDSDEADEI 507 Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 L E R +T S + D E E ++ Sbjct: 508 LKSNLLQENSSWNNSELDRSKIKATTEQSHLFYDQQEKDFDENELTTTAQNHSQ 561 >gi|255564118|ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis] gi|223537618|gb|EEF39241.1| DNA mismatch repair protein pms2, putative [Ricinus communis] Length = 924 Score = 260 bits (665), Expect = 4e-67, Method: Composition-based stats. Identities = 100/405 (24%), Positives = 188/405 (46%), Gaps = 15/405 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ +++ ++++I AG++I S A+KEL+ENSLDA ++ +E + G+ FQ+ DNG G Sbjct: 9 IKPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEDSFQVIDNGCG 68 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ + +H TSK++D D ++ TFGFRGEAL S+ A+ LT+ +R + Sbjct: 69 VSPNNFKVLALKHHTSKLADFPDLQSLTTFGFRGEALSSLCALGELTVETRTKNESVATH 128 Query: 121 IAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 ++ +++ + A GT V V+ LF +P R F ++ + E + ++ A+ Sbjct: 129 LSYDRSGLLTAEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYALI 188 Query: 179 YPKVS--FTFSTIKSNRYKMNFQSTNGNFPERISQVIGED-FINNAVELNEKSNEITLQG 235 V T +T ++ + + + + I V G F S+ + G Sbjct: 189 AKGVRLLCTNTTGRNAKIVVLKTQGTDSLKDNIITVFGMSTFSCLEPVSICISDCCKVDG 248 Query: 236 YTGIP--TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 + P R ++ Y F+NGR V + + Y +YP+ ++ + R Sbjct: 249 FLSKPGQGSGRNLGDRQYYFVNGRPVDMPKVTKLVNELYRGANSR-QYPIAIMNFIVPTR 307 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 DVNV P K I F + T I + + + +Q + S S ++ I + + Sbjct: 308 ACDVNVTPDKRKIFFSDETSILHALREGLQNIYSPSNASYSVNKFEERIKAASNSQSCSP 367 Query: 354 H-----LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 H L K ++++N E++ ++E+ ++LL + N Sbjct: 368 HEKSLVLSKQLSAVSNDAEEILVEEHTSDGSNLLQTVKMKSHPSN 412 Score = 139 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 84/209 (40%), Gaps = 21/209 (10%) Query: 401 ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 + Q + +II + L IVDQHAA E+ FE + ST + Q LL Sbjct: 711 KQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHL---CQSTILNQQPLLRS 767 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFG----PNAIAIREIPAILSKKNIPQLLRDI 516 ++L E + + E + + G E + ++ +P + + ++D+ Sbjct: 768 LRLELSPEEEVVASMNMELIRKNGFALEEDPHAPPGHRFKLKAVPFSKNITFGVEDVKDL 827 Query: 517 IDEIIDSSTTYTL-------------QDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 I + DS ++ R+ +LA+ AC S+ G + EM ++L Sbjct: 828 ISTLADSQGDCSIIGSYKMDKSDSVCPSRVRTMLASRACRSSVMIGDPLGRNEMQKILEH 887 Query: 564 MEKNPNSSQCNHGRPTFIKL-KLSDIEKL 591 + + C HGRPT L ++ I K Sbjct: 888 LADLNSPWNCPHGRPTMRHLVDMTSIYKR 916 >gi|71065479|ref|YP_264206.1| DNA mismatch repair protein MutL [Psychrobacter arcticus 273-4] gi|71038464|gb|AAZ18772.1| DNA mismatch repair protein MutL [Psychrobacter arcticus 273-4] Length = 583 Score = 259 bits (663), Expect = 6e-67, Method: Composition-based stats. Identities = 117/496 (23%), Positives = 210/496 (42%), Gaps = 42/496 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+KLS +INQ+AAGE++ RPS +KEL+EN++DA ++ +E I GG ++ DNG Sbjct: 9 RIKKLSPLLINQLAAGEVVTRPSAVVKELLENAIDAYATNIEVHITQGGMGMIEVIDNGV 68 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ MAV RH TSK++D I T GFRGEAL + AVS LTL+S + G Sbjct: 69 GIHPDDMVMAVTRHATSKVADVAHLHGITTLGFRGEALAATAAVSRLTLISSHDDSGIGR 128 Query: 120 QIAISG--EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 Q+ ++G + + + PV + GT + V+DL+F +PAR LKS E I + R +A+ Sbjct: 129 QLQVAGILDDMPKLIPVVHHRGTTITVKDLYFNVPARRGNLKSIATEFGHIETMFREVAL 188 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPER-----ISQVIGEDFINNAVELNEKSNEIT 232 A V+ T R ++ + + + + Q G A+E+ + +T Sbjct: 189 ARADVALTLFHDNKKRLSLSVNTISNDNENYLPLSRLEQATGLALTEQAIEVAVDLSSLT 248 Query: 233 LQGYTGI--------------------------PTFNRGNANQFYVFINGRTVQDKFILS 266 P+ + + +++NGR V++ I + Sbjct: 249 QHPSISSHSTHVTNGYTDNAGAMQSARISGWLWPSCDTNHHLPKLIYVNGRLVKEALISN 308 Query: 267 TIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 +R G L E+ + ++VNVHP+K I+ I + +++ + Sbjct: 309 QLRQMAQSAQLAG--MGYALYFELPTQWLNVNVHPSKQRIKISPLNNIMAHLSHAVRAKL 366 Query: 327 NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTN---DLLP 383 + +S A+S TN +Q + + + L Sbjct: 367 RTLNPAKIFSNKNATPNSNVSTKQSFNTSDPIASSTTNAIRTQQIQAPKQTYQLSANELL 426 Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI--VDQHAAHERLIFE 441 + N+ +E+S + + + I + GL+ H++ ++ + Sbjct: 427 FQNIKDCHINESIEDSSHAANSDPVETSPLPVCLEIINSVAGLIAESSAVHSSDDKALPW 486 Query: 442 KMRQDFNSTKITSQTL 457 + + S Sbjct: 487 LLFYHQGQCVLISAER 502 >gi|297679831|ref|XP_002817725.1| PREDICTED: LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2-like, partial [Pongo abelii] Length = 943 Score = 259 bits (663), Expect = 7e-67, Method: Composition-based stats. Identities = 96/416 (23%), Positives = 171/416 (41%), Gaps = 21/416 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 213 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 272 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 273 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 332 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF T+P R F ++ + E + V+ I Sbjct: 333 LMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCII 392 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEI----- 231 + + + + T G + E I V G+ + + Sbjct: 393 SAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQVMFFWKCRYPWGAFGLCLK 452 Query: 232 TLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 + G+ T G + ++ + FIN R + + Y +YP V L + Sbjct: 453 CISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHVY-NRQQYPFVALNIS 511 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK--KGISTSSVLSKKMISSFHQ 347 +D VD+NV P K I + ++ + S+ + ++ S + + + Sbjct: 512 VDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDVNKLNVSQQPLLDIEGNLIK 571 Query: 348 DNAPKTHLP-----KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 +A P ++ SL+ +EK + +RL L E Sbjct: 572 MHAADLEKPVVEKQDHSPSLSTQEEKRDVSISRLREAFSLRHATENKPHSPKTPEP 627 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 86/210 (40%), Gaps = 18/210 (8%) Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV----LSKKMISSFHQD 348 VD + +P + +FR N + ++ ++ +S S + ++ + +S+ D Sbjct: 732 SDVDCHSNPEDTRCKFRVLPQPTNLASPNTKRFKKEEILSNSDIRQKLVNTQNVSASQVD 791 Query: 349 NAPKTHLPKYA-----TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE--- 400 A K + + +SL ++L + + ++ + E E Sbjct: 792 VAVKINKKVVSLDFSMSSLAKRIKQLHHEAQQSESDQNYRKFRAKICPGENQAAEDELRK 851 Query: 401 ---ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 T + Q + +II++ + + IVDQHA E+ FE ++Q T + Q L Sbjct: 852 EISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQH---TVLQGQRL 908 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 + P+ ++L A+++E+ E + G Sbjct: 909 IAPQTLNLTAVNEAVLIENLEIFRKNGFDF 938 >gi|156406466|ref|XP_001641066.1| predicted protein [Nematostella vectensis] gi|156228203|gb|EDO49003.1| predicted protein [Nematostella vectensis] Length = 346 Score = 259 bits (663), Expect = 7e-67, Method: Composition-based stats. Identities = 92/341 (26%), Positives = 175/341 (51%), Gaps = 18/341 (5%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 L + +++IA+ ++I S A+KEL+EN+LDA ++ +E + G ++ DNG G+ Sbjct: 6 LLPQDTVHRIASSQVITSVSSAVKELLENALDAGANSIEVKLEEYGLEKIEVRDNGTGIP 65 Query: 65 SEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 ++ QRH TSKI+ + ++ ++GFRGEAL S+ AVS++++M++ G Sbjct: 66 QDDAQFMAQRHYTSKITTFHNLDSLASYGFRGEALCSLCAVSNVSVMTKTNNEEVGMCYT 125 Query: 123 ISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF---LKSEQVETNLITDVIRRMAIA 178 + +IS+ +P+ + GT+V +LF +P R F K + E + ++I + Sbjct: 126 LDQHGRISATKPLPLTTGTVVTACNLFKNLPVRKQFSRGNKKCKDELKKVEELIMAFGLI 185 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGY 236 +P V T KS ++ N + + ++ +IG + +++ E+ K ++ + ++G+ Sbjct: 186 HPSVRLTLRHNKSIIWQKN---KCEDLKKALTGIIGANAMSSMEEIIVKDDQTGLRIEGF 242 Query: 237 TGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPL--GRYPVVVLLLE 289 P +R ++ +V++N R V K I +R Y + P R+PV L +E Sbjct: 243 VPKPGSDPNVTSRSMGDRSFVYVNKRPVVLKEIAQVVREFYLKIHPTISNRHPVAFLSIE 302 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 + P VDVN+ P KS + II + + S+++ Sbjct: 303 VPPCAVDVNLEPNKSRVLLTEKDIIIDLLRNSLEELYVDHN 343 >gi|254583920|ref|XP_002497528.1| ZYRO0F07634p [Zygosaccharomyces rouxii] gi|238940421|emb|CAR28595.1| ZYRO0F07634p [Zygosaccharomyces rouxii] Length = 744 Score = 259 bits (661), Expect = 1e-66, Method: Composition-based stats. Identities = 123/716 (17%), Positives = 257/716 (35%), Gaps = 139/716 (19%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I KL + + + + + A++E+++NS+DA ++ ++ ++ SF + DNG+G Sbjct: 5 ISKLDPNVSRVLRSQIVAVSLTSAVREVVQNSVDAGATALQIMVDPFQMSFM-VKDNGYG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M +++ +H TSKI D ++TFGFRGEAL I ++ +TL+S+ N+ Sbjct: 64 MDPQDLDRVGCQHFTSKIRSLHDLQTLNTFGFRGEALFCIANIAQVTLVSKRSDCNSSWI 123 Query: 121 ----IAISGEKISSVRPVAMN---------PGTIVEVRDLFFTIPARLNFLKSEQVETNL 167 K GT V VR++ + +P R L ++ + L Sbjct: 124 RDIPYESRLFKDPKGDASYHFSLQPISKEESGTTVLVRNILYNVPVRRRILANDPLFKTL 183 Query: 168 IT--DVIRRMAIAYPKVSFTFSTIK---------SNRYKMNFQSTNGNFPERISQVIGED 216 T + + ++ I P +S S + S+ + + S + G Sbjct: 184 HTLREDLFQVLILRPDISLKVSYLDQLGKLKELISSTNITKDMNHFMKLSQSFSNIFGSV 243 Query: 217 FINNAV-ELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYA-- 273 + +++ K ++ G ++++NGR ++ I + Sbjct: 244 TPIDMFTKVSVKFKGCSVTGLISKCPV--RPKEFQFIYLNGRKYTNQAFQKVINGIFQTA 301 Query: 274 --------ETI------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 +T+ P YP+++L + D+ PAK + + ++ I+ Sbjct: 302 GFGAGGLSDTLIKTVGKPFNNYPLIILDVRCPQVAEDLMQDPAKDVVSSSHAHLLHPLIL 361 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTN 379 + I+ ++ +G +S + ++ ++ P T P +T N+ + RL T+ Sbjct: 362 RVIKSFLSHQGYMANSSAAVNDLTENNKTI-PNTSSPLPSTKFANSVLNSNARMARLKTD 420 Query: 380 DLLPSDDPTYSEDN--------DPVEESEATHYQLGIACAQIHQNYIISQTTDGL----- 426 + P + + D ++ + + + + + ++GL Sbjct: 421 KKVDKTSPVTKQIDSGKIKPILDKLKRALPQDKLDIEQIYEKNDCCVPTPYSNGLGHIER 480 Query: 427 ------------------------------------------VIVDQHAAHERLIFEKMR 444 +IVDQHA ER+ E Sbjct: 481 LEGMDFKLDRSQLIKAEVIRQVDKKFILLKIPPNENVAHSMLIIVDQHACDERINLENYL 540 Query: 445 QDFNSTKIT---SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER----FGPNAIAI 497 +DF + ++ ID+ E L ++++ + I E + + Sbjct: 541 KDFLYQVLEGTLMTHPVSDCAIDIDITEGYLFRHYEKEFKKWAISCEIKILNLETCFLMV 600 Query: 498 REIPAILS---KKNIPQLLRDIIDEIIDSSTT---------------------------Y 527 +P +L+ + + L ++ + D + + Sbjct: 601 SSLPDVLTIKVQGDKQFLKNALLQMVHDFKNSEKIPITNMCDRHVFKMSINKFEWWKYLH 660 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 L I + AC SI G + + E + L++++ + QC HGRP+ I L Sbjct: 661 CLPTMFREIFNSRACRSSIMFGDLLSTPECSLLIKQLAQCHTPFQCAHGRPSVIPL 716 >gi|67616266|ref|XP_667471.1| hypothetical protein [Cryptosporidium hominis TU502] gi|54658612|gb|EAL37242.1| hypothetical protein Chro.50122 [Cryptosporidium hominis] Length = 444 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 106/364 (29%), Positives = 175/364 (48%), Gaps = 28/364 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IRKLS+++I++IAAGE++ PS A+KEL+ENSLDA S + + GG QI+D+G Sbjct: 3 RIRKLSDEVISRIAAGEVVVSPSHALKELLENSLDAGSRNIVLQLRKGGIQSLQISDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + PM +R TSK++ D ++ TFGFRGEAL SI VS L++ S+ ++ Sbjct: 63 GIDKNDFPMLCERFATSKLTSMKDIQSLKTFGFRGEALSSISFVSQLSITSKTEMSDCAY 122 Query: 120 QIAISGEKISS--VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + + S K+ S GTIV++ DLF+ +P+R + S E D++++ I Sbjct: 123 RASFSDGKMISELEEVALAKRGTIVQINDLFYNMPSRQRAMGSASDEYARCLDLVQKYCI 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV--------------- 222 +P+VSF N + I + G + + + Sbjct: 183 EFPEVSFNVRKFGQNTNDLRTNGGVKTRKNVIGLLYGSNVVKELIQFTVSRDSERPRDSN 242 Query: 223 -----ELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP 277 EL+ K + + + Y +N N +FINGR V++ I I TAY T Sbjct: 243 KEKSNELSLKIPDFSAELYISGLGYNPKQ-NTLIIFINGRLVKNNAIKQAIETAYQYTKS 301 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL 337 + + I +D N+HP K+ + + +I + I + + ++ S + VL Sbjct: 302 N---YWAFVSVRIPSETIDPNIHPTKNLVYISHEALISDAIQRKVMCSLQASNYSRNMVL 358 Query: 338 SKKM 341 +K Sbjct: 359 ERKP 362 >gi|291413733|ref|XP_002723121.1| PREDICTED: PMS2 postmeiotic segregation increased 2 [Oryctolagus cuniculus] Length = 867 Score = 258 bits (659), Expect = 2e-66, Method: Composition-based stats. Identities = 85/352 (24%), Positives = 153/352 (43%), Gaps = 27/352 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR + K ++QI +G+++ S A+KEL+ENS+DA ++ ++ + G +++DNG G Sbjct: 39 IRPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLRLKDYGVDLIEVSDNGCG 98 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +H TSKI D D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 99 VEEGNFEGLTLKHHTSKIQDFADLTQVATFGFRGEALSSLCALSDVTISTCHSSAKVGTR 158 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF+ +P R F ++ + E + V+ I Sbjct: 159 LVFDHSGKILQKTPCPRPRGTTVSVQQLFYPLPVRHKEFQRNIKKEYAKMVQVLHAYCII 218 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE---------- 226 + + + + R + S + + E I V G+ + + + + Sbjct: 219 STGIRVSCTNQLGQGKRQPVVCTSGSSSIKENIGCVFGQKQLQSLIPFVQLPPSDSVCEE 278 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 279 YGLSCSEALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHMY- 337 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 ++P VVL + +D VD+NV P K I + ++ + S+ + Sbjct: 338 NRHQHPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIGMFDS 389 Score = 154 bits (388), Expect = 5e-35, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 107/259 (41%), Gaps = 10/259 (3%) Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 G ++ ++ K+ + + L + L + +E ++N + D Sbjct: 605 GPASQLDVAVKVPKRVVPLDFSMSSLAERVRRLLHREEPGGGEQNYRRFRAKICPGDNQA 664 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 +E + +E + Q + +II++ + L IVDQHA E+ FE +++ Sbjct: 665 AE-EELRKEISKAMFAEMEIIGQFNLGFIITKLHEDLFIVDQHATDEKYNFEMLQRH--- 720 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAIL 504 T + Q L+ P+ ++L A+++E+ E + G A + +P Sbjct: 721 TVLQGQRLIAPQALNLTAVNEAILLENLEIFRKNGFDFVIDEAAPVTQRAKLV-SLPTSK 779 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 + PQ + ++I + DS R+ + A+ AC S+ G + EM +L+ M Sbjct: 780 NWTFGPQDIDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNPSEMKQLVTHM 839 Query: 565 EKNPNSSQCNHGRPTFIKL 583 + + C HGRPT + Sbjct: 840 GEMDHPWNCPHGRPTLRHI 858 >gi|301784411|ref|XP_002927619.1| PREDICTED: mismatch repair endonuclease PMS2-like [Ailuropoda melanoleuca] Length = 870 Score = 258 bits (659), Expect = 2e-66, Method: Composition-based stats. Identities = 94/423 (22%), Positives = 176/423 (41%), Gaps = 29/423 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENS+DA ++ ++ + G +++DNG G Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI D D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 75 VEEENFEGLTLKHHTSKIQDFADLTQVETFGFRGEALSSLCALSDVTISTCHTSAKVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + +I P GT V V+ LF+T+P R F ++ + E + V+ I Sbjct: 135 LVFDHNGRIVQRSPHPRPRGTTVSVQQLFYTLPVRHKEFQRNIKKEYAKMVQVLHAYCII 194 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE---------- 226 + + S + R + S + + E I+ V G+ + + + + Sbjct: 195 SAGIRVSCSNQVGQGKRQPVVCTSGSSSIKENIASVFGQKQLQSLIPFAQLPPSDSVCEE 254 Query: 227 --------KSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 + G+ R +A++ + FINGR + + Y Sbjct: 255 YGLSPADAVQTLFHISGFISHCAHGVGRSSADRQFFFINGRPCDPAKVSRLVNEVYHMY- 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK--KGISTS 334 +YP VVL + +D VD+NV P K I + ++ + S+ + ++ S Sbjct: 314 NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLVGMFDSDVNKLNVS 373 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 M + ++ ++ P+ + + +E R T L + Sbjct: 374 QQPLLGMEGHLIKTHSAESDKPQPERRDSPASLRTGGEEKRAVTISRLRETFSLRHTMEN 433 Query: 395 PVE 397 + Sbjct: 434 RPQ 436 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 9/191 (4%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E T + Q + +II++ + IVDQHA E+ FE ++Q Q L Sbjct: 675 EISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTALQG---QRL 731 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQL 512 + P+ ++L A+++E+ E + G A I +P + PQ Sbjct: 732 IAPQTLNLTAVNEAVLIENLEIFRKNGFDFIIDEGAPVTERAKLI-SLPTSKNWTFGPQD 790 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + ++I + DS R+ + A+ AC S+ G + + EM +L+ M + + Sbjct: 791 IDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLVTHMGEMDHPWN 850 Query: 573 CNHGRPTFIKL 583 C HGRPT + Sbjct: 851 CPHGRPTMRHM 861 >gi|309358798|emb|CAP33641.2| CBR-MLH-1 protein [Caenorhabditis briggsae AF16] Length = 761 Score = 258 bits (659), Expect = 2e-66, Method: Composition-based stats. Identities = 97/315 (30%), Positives = 162/315 (51%), Gaps = 21/315 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L E ++N++AAGE++ RP AIKEL+ENSLDA ++ ++ ++ GG Q++DNG G Sbjct: 4 IQRLPEDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIKVMMQNGGLKTLQVSDNGKG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ + +R TSK+ +D ++ T+GFRGEAL S+ V+ + ++S+ Q Sbjct: 64 IEREDFELVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRADAKCAYQ 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 G+ ++ +P A GT + DLF+ +P R N + + E ++ D + R AI P Sbjct: 124 ---DGKLLAPTKPAAGKNGTCITATDLFYNLPTRRNKMTTHGEEAKMVYDTLLRFAIHRP 180 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYTG 238 VSF +S+ ++ +GNF + + ++G D + + ++ SN G Sbjct: 181 DVSFALHQNQSSDFRTK---GDGNFRDVVCNLLGRDVADTVIPISLDSNRLKFKFTGKIS 237 Query: 239 IPTFNRGNANQFYV---------FINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 P + + N FINGR+V+ + I + L LE Sbjct: 238 KPIASATSKNAQNRKTSRSFFSVFINGRSVRCDILKHPIDDVLQNRSLCVQ--FCALHLE 295 Query: 290 IDPRQVDVNVHPAKS 304 ID ++DVNVHP KS Sbjct: 296 IDETRIDVNVHPTKS 310 >gi|224045611|ref|XP_002197386.1| PREDICTED: mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Taeniopygia guttata] Length = 717 Score = 258 bits (659), Expect = 2e-66, Method: Composition-based stats. Identities = 102/385 (26%), Positives = 170/385 (44%), Gaps = 15/385 (3%) Query: 34 SLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFG 91 SLDA+S+ ++ V+ GG F Q+ DNG G+ E++ + +R TSK+ +D ++I T+G Sbjct: 29 SLDAKSTSIQVVVKEGGLKFIQVQDNGCGIRKEDLDIVCERFTTSKLQKFEDLASISTYG 88 Query: 92 FRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFT 150 FRGEAL SI V+H+T+ ++ + S KI +P A N GT + V DLF+ Sbjct: 89 FRGEALASISHVAHVTVTTKTADAKCAFRATYSDGKIKAPPKPCAGNQGTQITVEDLFYN 148 Query: 151 IPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERIS 210 + R LK+ E I +V+ R AI +SF+ + S + I Sbjct: 149 VNTRRKALKNPNEEYAKILEVVSRYAIHNSGISFSVKKQGDTVSDVRTLSNASTV-DNIR 207 Query: 211 QVIGEDFINNAVELNEKSNE--ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTI 268 + G +E+ + ++GY ++ +FIN R V+ + I Sbjct: 208 AIFGNAVSRELIEVGCEDANLAFKMKGYITNANYSVKKCIFL-LFINHRLVESAALRKAI 266 Query: 269 RTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 T YA +P +P + L LEI P+ VDVNVHP K + F + I + Q ++ + Sbjct: 267 ETVYAAYLPKSTHPFLYLSLEIAPQNVDVNVHPTKHEVHFLHEDSILERVQQHVESKLLG 326 Query: 329 KGIS--------TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTND 380 S + V + +M+ + ++ L SL++ ++ N Sbjct: 327 SNSSRMYFTQGNSDKVYAHQMVRTDSREQKMDAFLQPVNNSLSSGPTEVTTGVNARPPEG 386 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQ 405 D E +D VE ++ Sbjct: 387 ADRPQDAEMEEVSDLVEMADVQENP 411 >gi|169642755|gb|AAI60858.1| Pms2 protein [Rattus norvegicus] Length = 853 Score = 258 bits (659), Expect = 2e-66, Method: Composition-based stats. Identities = 98/424 (23%), Positives = 180/424 (42%), Gaps = 30/424 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KELIENS+DA ++ ++ + G +++DNG G Sbjct: 15 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATSIDLRLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + + G + Sbjct: 75 VEEENFEGLALKHHTSKIREFADLTQVETFGFRGEALSSLCALSDVTISTCHVSASIGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + + KI P GT V V++LF+T+P R F ++ + E + V++ I Sbjct: 135 LVLDHNGKIIQKTPCPRPKGTTVSVQNLFYTLPVRHKEFQRNIKKEYAKMVQVLQAYCII 194 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE------------- 223 + + + + R + S + E I V G+ + + V Sbjct: 195 SAGIRVSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLVPFVQLPPSDSVCEE 254 Query: 224 -----LNEKSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 + + G+ T G + ++ + FIN R + + Y Sbjct: 255 YCLSACGTPQSPFRISGFISQCTHGAGRSSTDRQFFFINQRPCDPAKVSRLVNEVYHMY- 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--ISTS 334 +YP VVL + +D VD+NV P K I + ++ + S+ + +S + Sbjct: 314 NRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLMGMFDSDANKLSVN 373 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLT-NTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 + + + + + + + SL +EK +RL L T S Sbjct: 374 QQPLLNVEGNLVKLHTAEVGEQENSPSLRITAEEKRVASVSRLREAYSLHRTTETKSWGP 433 Query: 394 DPVE 397 + E Sbjct: 434 ETPE 437 Score = 150 bits (380), Expect = 4e-34, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 9/191 (4%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + + Q + +I+++ + L +VDQHAA E+ FE ++Q T + +Q L Sbjct: 658 EIRKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQH---TVLQAQRL 714 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQL 512 +TP+ ++L A+++E+ E + G A I +P + PQ Sbjct: 715 ITPQTLNLTAVNEAVLIENLEIFRKNGFDFIIDEDAPVTERAKLI-SLPTSKNWTFGPQD 773 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + ++I + DS R+ + A+ AC S+ G + + EM +L+ M + + Sbjct: 774 IDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALSASEMKKLISHMGEMDHPWN 833 Query: 573 CNHGRPTFIKL 583 C HGRPT + Sbjct: 834 CPHGRPTMRHI 844 >gi|148687083|gb|EDL19030.1| postmeiotic segregation increased 2 (S. cerevisiae), isoform CRA_b [Mus musculus] Length = 794 Score = 258 bits (659), Expect = 2e-66, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 173/404 (42%), Gaps = 29/404 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KELIENS+DA ++ ++ + G +++DNG G Sbjct: 6 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 65 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + + G + Sbjct: 66 VEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHGSASVGTR 125 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI+ P GT V V+ LF+T+P R F ++ + E + V++ I Sbjct: 126 LVFDHNGKITQKTPYPRPKGTTVSVQHLFYTLPVRYKEFQRNIKKEYAKMVQVLQAYCII 185 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE---------- 226 V + + + R + S + E I V G+ + + + + Sbjct: 186 SAGVRVSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLIPFVQLPPSDAVCEE 245 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 246 YGLSTSRTPQNLFYVSGFISQCTHGAGRSATDRQFFFINQRPCDPAKVSKLVNEVYHMY- 304 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--ISTS 334 +YP VVL + +D VD+NV P K I + ++ + S+ + ++ + Sbjct: 305 NRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDANKLNVN 364 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 + + + + + P + K E R+++ Sbjct: 365 QQPLLDVEGNLVKLHTAELEKPVPGKQDNSPSLKSTADEKRVAS 408 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 7/227 (3%) Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 L+ T K F E R S ++ S V+ + + ++ + + + Sbjct: 559 LSPTNAKRFKTEERPSNVNISQRLPGPQSTSAAEVDVAIKMNKRIVLLEFSLSSLAKRMK 618 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQ-DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 L ++H R K+ + + + + + P+ ++L A+++E+ E Sbjct: 619 QLQHLKAQNKHELSYRKFRAKICPGENQAAEDELRKEIRPQTLNLTAVNEAVLIENLEIF 678 Query: 481 HRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 + G A I +P + PQ + ++I + DS R+ Sbjct: 679 RKNGFDFVIDEDAPVTERAKLI-SLPTSKNWTFGPQDIDELIFMLSDSPGVMCRPSRVRQ 737 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 + A+ AC S+ G + + EM +L+ M + + C HGRPT Sbjct: 738 MFASRACRKSVMIGTALNASEMKKLITHMGEMDHPWNCPHGRPTMRH 784 >gi|148687084|gb|EDL19031.1| postmeiotic segregation increased 2 (S. cerevisiae), isoform CRA_c [Mus musculus] Length = 850 Score = 258 bits (659), Expect = 2e-66, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 173/404 (42%), Gaps = 29/404 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KELIENS+DA ++ ++ + G +++DNG G Sbjct: 6 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 65 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + + G + Sbjct: 66 VEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHGSASVGTR 125 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI+ P GT V V+ LF+T+P R F ++ + E + V++ I Sbjct: 126 LVFDHNGKITQKTPYPRPKGTTVSVQHLFYTLPVRYKEFQRNIKKEYAKMVQVLQAYCII 185 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE---------- 226 V + + + R + S + E I V G+ + + + + Sbjct: 186 SAGVRVSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLIPFVQLPPSDAVCEE 245 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 246 YGLSTSRTPQNLFYVSGFISQCTHGAGRSATDRQFFFINQRPCDPAKVSKLVNEVYHMY- 304 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--ISTS 334 +YP VVL + +D VD+NV P K I + ++ + S+ + ++ + Sbjct: 305 NRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDANKLNVN 364 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 + + + + + P + K E R+++ Sbjct: 365 QQPLLDVEGNLVKLHTAELEKPVPGKQDNSPSLKSTADEKRVAS 408 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 9/190 (4%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + + Q + +I+++ + L +VDQHAA E+ FE ++Q T + +Q L Sbjct: 655 EISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQH---TVLQAQRL 711 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQL 512 +TP+ ++L A+++E+ E + G A I +P + PQ Sbjct: 712 ITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLI-SLPTSKNWTFGPQD 770 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + ++I + DS R+ + A+ AC S+ G + + EM +L+ M + + Sbjct: 771 IDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNASEMKKLITHMGEMDHPWN 830 Query: 573 CNHGRPTFIK 582 C HGRPT Sbjct: 831 CPHGRPTMRH 840 >gi|121583910|ref|NP_032912.2| mismatch repair endonuclease PMS2 [Mus musculus] gi|148687085|gb|EDL19032.1| postmeiotic segregation increased 2 (S. cerevisiae), isoform CRA_d [Mus musculus] gi|223461565|gb|AAI41288.1| Postmeiotic segregation increased 2 (S. cerevisiae) [Mus musculus] Length = 859 Score = 258 bits (659), Expect = 2e-66, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 173/404 (42%), Gaps = 29/404 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KELIENS+DA ++ ++ + G +++DNG G Sbjct: 15 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + + G + Sbjct: 75 VEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHGSASVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI+ P GT V V+ LF+T+P R F ++ + E + V++ I Sbjct: 135 LVFDHNGKITQKTPYPRPKGTTVSVQHLFYTLPVRYKEFQRNIKKEYAKMVQVLQAYCII 194 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE---------- 226 V + + + R + S + E I V G+ + + + + Sbjct: 195 SAGVRVSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLIPFVQLPPSDAVCEE 254 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 255 YGLSTSRTPQNLFYVSGFISQCTHGAGRSATDRQFFFINQRPCDPAKVSKLVNEVYHMY- 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--ISTS 334 +YP VVL + +D VD+NV P K I + ++ + S+ + ++ + Sbjct: 314 NRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDANKLNVN 373 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 + + + + + P + K E R+++ Sbjct: 374 QQPLLDVEGNLVKLHTAELEKPVPGKQDNSPSLKSTADEKRVAS 417 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 9/190 (4%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + + Q + +I+++ + L +VDQHAA E+ FE ++Q T + +Q L Sbjct: 664 EISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQH---TVLQAQRL 720 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQL 512 +TP+ ++L A+++E+ E + G A I +P + PQ Sbjct: 721 ITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLI-SLPTSKNWTFGPQD 779 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + ++I + DS R+ + A+ AC S+ G + + EM +L+ M + + Sbjct: 780 IDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNASEMKKLITHMGEMDHPWN 839 Query: 573 CNHGRPTFIK 582 C HGRPT Sbjct: 840 CPHGRPTMRH 849 >gi|311250873|ref|XP_003124331.1| PREDICTED: mismatch repair endonuclease PMS2-like [Sus scrofa] Length = 852 Score = 258 bits (659), Expect = 2e-66, Method: Composition-based stats. Identities = 96/404 (23%), Positives = 167/404 (41%), Gaps = 29/404 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENS+DA ++ ++ + G +++DNG G Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLRLKDYGMDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF+T+P R F ++ + E + V+ I Sbjct: 135 LVFDHNGKILQKSPYPRPRGTTVSVQQLFYTLPVRHKEFQRNIKKEFAKMVQVLHAYCII 194 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE---------- 226 V T + + R + S + E I V G+ + + + + Sbjct: 195 SSGVRVTCTNQVGQGKRQPVVSTSGGASIKENIGSVFGQKQLQSLISFVQLPPSDSVCEE 254 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 255 FGLSCSDALHNLFCISGFISRCTHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYH-LY 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 +YP VVL + +D VD+NV P K I + ++ + S+ + S Sbjct: 314 NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIDMFDNDVNKISVR 373 Query: 337 LSK--KMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 + + + + +T P K QE R T Sbjct: 374 QQSLLDVEGNLIKRHPAETERPGPEQQEHPAPLKAAGQEKRAVT 417 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 9/224 (4%) Query: 365 TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 QE+ E + +++ +E + Q + +II++ Sbjct: 624 RQEQQREGEQNYRKFRAKICPGENQAAEDELRKEISKEMFAEMEIIGQFNLGFIITKLNA 683 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 + IVDQHA E+ FE ++Q T + Q L+ P+ ++L A+++E+ + + G Sbjct: 684 DIFIVDQHATDEKYNFEMLQQH---TVLQGQRLIVPQTLNLTAVNEAVLIENLDIFRKNG 740 Query: 485 IKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 A I +P + PQ + ++I + DS R+ + A+ Sbjct: 741 FDFVIDEDAPVTERAKLI-SLPTSKNWTFGPQDIDELIFMLSDSPGVMCRPSRVRQMFAS 799 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 AC S+ G + + EM RL+ M + + C HGRPT + Sbjct: 800 RACRKSVMIGTALNTSEMRRLVSHMGEMDHPWNCPHGRPTMRHI 843 >gi|327285948|ref|XP_003227693.1| PREDICTED: mismatch repair endonuclease PMS2-like [Anolis carolinensis] Length = 842 Score = 257 bits (657), Expect = 4e-66, Method: Composition-based stats. Identities = 94/393 (23%), Positives = 163/393 (41%), Gaps = 28/393 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + + ++QI +G+++ A+KEL+ENS+DA ++ VE + G +++DNG G Sbjct: 10 IKPIDRRSVHQICSGQVVLNLCTAVKELVENSIDAGATTVEVKLKDYGADLIEVSDNGCG 69 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI D D N+ TFGFRGEAL S+ A+S +++ + G + Sbjct: 70 VEEENFAGLTLKHHTSKIQDFSDLINVETFGFRGEALSSLCALSDVSIFTCHTSAKVGTR 129 Query: 121 IAISG-EKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI+ P GT V V+ LF T+P R F ++ + E + V++ I Sbjct: 130 LVFDHGGKITLKVPCPRQQGTTVSVQQLFHTLPVRHKEFQRNIKKEYAKMVQVLQAYCIV 189 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNE---------- 226 V T + K TNGN E I + G+ + + + + Sbjct: 190 STGVRITCTNQVGQGKKQPVVCTNGNSTVKENIGAIFGQKQVQSLIPFVQLPPSDAICEE 249 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 + T+ G+ G + ++ + FIN R + + Y Sbjct: 250 YGLNPADIPTRLYTITGFVSRCDHGIGRSTTDRQFFFINQRPCDPTKVSKLVNEVYHMY- 308 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-NKKGISTSS 335 +YP VVL + D VD+NV P K I + ++ + S+ N + Sbjct: 309 NRHQYPFVVLNICADSESVDINVTPDKRQIFLQEEKLLLAIVKTSMMGMFGNDVNKIVLN 368 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 + +F P T +++ + Sbjct: 369 QKLIDVEGNFKTTVRNGAESPPLETRDSSSPNR 401 Score = 154 bits (389), Expect = 4e-35, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 7/195 (3%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + Q + +I+++ L IVDQHA+ E+ FE++++ T + Q L Sbjct: 647 EISKEMFAKMDIIGQFNLGFIVAKLNSDLFIVDQHASDEKYNFEQLQEH---TVLQGQRL 703 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP----NAIAIREIPAILSKKNIPQLL 513 ++P+ ++L ++++E+ E + G + + +P + PQ + Sbjct: 704 ISPQNLNLTAINESVLIENLEIFRKNGFDFVINEDAPVTQRVQLISLPMSKNWTFGPQDI 763 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 ++I + DS R+ + A+ AC S+ G + + EM +L+ M + + C Sbjct: 764 DELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMVGTALNAKEMKKLITHMGEIEHPWNC 823 Query: 574 NHGRPTFIKLKLSDI 588 HGRPT L D+ Sbjct: 824 PHGRPTIRHLANLDL 838 >gi|331218508|ref|XP_003321931.1| hypothetical protein PGTG_03468 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309300921|gb|EFP77512.1| hypothetical protein PGTG_03468 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 748 Score = 256 bits (655), Expect = 6e-66, Method: Composition-based stats. Identities = 111/407 (27%), Positives = 174/407 (42%), Gaps = 60/407 (14%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I L E ++N+IAAGEII RP+ AIKEL+EN +DA ++ V+ + GG QI DNG Sbjct: 50 PIVALEESVVNRIAAGEIIIRPANAIKELLENCIDAGATSVKITVKDGGAKMLQIQDNGS 109 Query: 62 GM-----------------------TSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEA 96 G+ ++ + +R TSKI DD S++ T+GFRGEA Sbjct: 110 GIRASPSFLNRSIQISGWTLLIHIQQKADLGILCERFTTSKIRKFDDLSSLCTYGFRGEA 169 Query: 97 LPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISS--------VRPVAMNPGTIVEVRDLF 148 L SI ++HLT+ ++ G + S K++ +P A N GT++ V D+F Sbjct: 170 LASISHIAHLTIATKTRSEGVGWKAQYSDGKLAPLKAGGPSDPQPCAGNDGTMITVEDMF 229 Query: 149 FTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPER 208 + +P R L+S E I DV+ R AI V+ + S +N ++ E Sbjct: 230 YNVPQRRKALQSPSDEYRKILDVVTRYAIHNQGVAISCKKTGSASPDVNTTAS-ATILET 288 Query: 209 ISQVIGE--DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 I ++ E +E +K ++GY +N A +FIN Sbjct: 289 IGRLFSETLKKELMHLEFTDKKLGFKVEGYFSTANYNAKKAITM-IFINS---------- 337 Query: 267 TIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 +P + + LEI P +VD NVHP K + F + I I + + Sbjct: 338 -------------NFPFIYISLEIAPDRVDPNVHPNKKEVHFLDQDEIVERICDKLNVFL 384 Query: 327 NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE 373 S S + + + D + + S T+ K+ Q+ Sbjct: 385 AGSNSSRSYNVQTLLPMATPDDKGINSSQTNTSQSKTSKSAKVLPQK 431 >gi|74226946|dbj|BAE27115.1| unnamed protein product [Mus musculus] Length = 859 Score = 256 bits (655), Expect = 6e-66, Method: Composition-based stats. Identities = 90/404 (22%), Positives = 173/404 (42%), Gaps = 29/404 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KELIENS+DA ++ ++ + G +++DNG G Sbjct: 15 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + + G + Sbjct: 75 VEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHGSASVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI+ P GT V V+ LF+T+P R F ++ + E + V++ I Sbjct: 135 LVFDHNGKITQKTPYPRPKGTTVSVQHLFYTLPVRYKEFQRNIKKEYAKMVQVLQAYCII 194 Query: 179 YPKVSFTFSTI-KSNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNE---------- 226 V + + + + ++ + E I V G+ + + + + Sbjct: 195 SAGVRVSCTNQLGQGKRQPXVCTSASSGMKENIGSVFGQKQLQSLIPFVQLPPSDAVCEE 254 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 255 YGLSTSRTPQNLFYVSGFISQCTHGAGRSATDRQFFFINQRPCDPAKVSKLVNEVYHMY- 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--ISTS 334 +YP VVL + +D VD+NV P K I + ++ + S+ + ++ + Sbjct: 314 NRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDANKLNVN 373 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 + + + + + P + K E R+++ Sbjct: 374 QQPLLDVEGNLVKLHTAELEKPVPGKQDNSPSLKSTADEKRVAS 417 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 9/190 (4%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + + Q + +I+++ + L +VDQHAA E+ FE ++Q T + +Q L Sbjct: 664 EISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQH---TVLQAQRL 720 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQL 512 +TP+ ++L A+++E+ E + G A I +P + PQ Sbjct: 721 ITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLI-SLPTSKNWTFGPQD 779 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + ++I + DS R+ + A+ AC S+ G + + EM +L+ M + + Sbjct: 780 IDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNASEMKKLITHMGEMDHPWN 839 Query: 573 CNHGRPTFIK 582 C HGRPT Sbjct: 840 CPHGRPTMRH 849 >gi|117556979|gb|ABK35675.1| putative mismatch repair protein [Tetrahymena thermophila] Length = 756 Score = 256 bits (654), Expect = 7e-66, Method: Composition-based stats. Identities = 108/438 (24%), Positives = 190/438 (43%), Gaps = 21/438 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+KL +++I++IAAGE+++RPS A+KELIEN LDA SS + + GG + DNG Sbjct: 13 QIKKLPQELIDKIAAGEVVQRPSAAVKELIENCLDAGSSEISVGLVQGGLKQLIVEDNGS 72 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ P+ +R TSKI++ D ++ +FGFRGEAL SI VS+L + SR P ++ G Sbjct: 73 GIHKDDFPLLCERFATSKINEFNDLQSLVSFGFRGEALASISFVSNLKITSRKPNSDLGY 132 Query: 120 QIAISGEKI--SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + + + V GT V+V+DLFF AR L + E + +I + A+ Sbjct: 133 KASFKNGVMLGEEPEAVNCTEGTTVDVQDLFFNYDARRKSL-NVNEEKKRVLKLIGQFAM 191 Query: 178 AYPKVSFTFSTIKSNRYKMNFQST------NGNFPERISQVIGEDFINNAVELNEKSNEI 231 + K+ F F + ++ + ++I+++ + F + E ++ Sbjct: 192 HHAKLRFKFKSDNQIQFSSHSVLGSTELQRREQIMQQITKIADKSFTS--CESESTEYQV 249 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP-----LGRYPVVVL 286 +G + +FIN R V+ + I + +Y G Y L Sbjct: 250 KFKGTFSNIGATKKYKE-ITLFINNRLVECESIKKAVERSYQSCYQSIHEEEGGY-FCYL 307 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS-SVLSKKMISSF 345 LE++P+ +D NVHP K ++F I I I + + G+ S + SSF Sbjct: 308 SLEMNPKNLDPNVHPTKKEVKFLFEYEIAKEIESWIFENLKNCGVIKQLSANISQRTSSF 367 Query: 346 HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 N ++ + + K + + + D + + + Sbjct: 368 ETSNVKRSSSSQLYFGSQSNLSKQNSDYYQPTKQIRVDPRDQKITRFFSVESSEDGNNNS 427 Query: 406 LGIACAQIHQNYIISQTT 423 I+ + Sbjct: 428 NQKNYQSINYIEEQKEEH 445 >gi|296192534|ref|XP_002806632.1| PREDICTED: LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2-like [Callithrix jacchus] Length = 1052 Score = 256 bits (654), Expect = 7e-66, Method: Composition-based stats. Identities = 99/440 (22%), Positives = 177/440 (40%), Gaps = 31/440 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 205 IRPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 264 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI D D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 265 VEEENFEGLTLKHYTSKIQDFADLTQVETFGFRGEALSSLCALSDVTISTCHASVKVGTR 324 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF+T+P R F ++ + E + V+ I Sbjct: 325 LVFDHSGKIIQKTPYPRPKGTTVSVQQLFYTLPVRHKEFQRNIKKEYAKMVQVLHAYCII 384 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNE---------- 226 + + + + T G + E I V G+ + + + + Sbjct: 385 SSGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEE 444 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ G + ++ + FIN R + + Y Sbjct: 445 YGLSCSDALHNLFYISGFISQCAHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHMY- 503 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI----NKKGIS 332 +YP VVL + +D VD+NV P K I + ++ + S+ NK +S Sbjct: 504 NRNQYPFVVLNISVDAECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDVNKLNVS 563 Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 +L + LP+ + +++ + ++ +S S T Sbjct: 564 QQPLLDIGGNLMKVHAADLEKPLPEQQDNSPSSRTREEKRDVSISRLREAFSLHHTAESK 623 Query: 393 NDPVEESEATHYQLGIACAQ 412 + ++ E G Sbjct: 624 SHSLKTPEPRRSSPGQKRGM 643 Score = 149 bits (377), Expect = 9e-34, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 116/293 (39%), Gaps = 17/293 (5%) Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 N K N IR ++ + + ++ ++ K+ + + L Sbjct: 763 SPNTKRFKKEEILSNSD-IRQKLVNT------QNVSASQVDVAVKIDKKVVPLDFSMSSL 815 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 K + ++ ++N + + +E ++ +E + + Q + Sbjct: 816 TKRMKQFHHKAKQSEGEQNYRKFRAKICPGENQAAE-DELRKEISKSMFAEMEIIGQFNL 874 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 +II++ + + IVDQHA E+ FE ++Q T + Q L+ P+ ++L +++E Sbjct: 875 GFIITKLNEDIFIVDQHATDEKYNFEMLQQH---TVLQGQRLIVPQTLNLTAVNEIILIE 931 Query: 476 HDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 + E + G A I +P + PQ + ++I + DS Sbjct: 932 NLEIFRKNGFDFVIDESAPVTQKAKLI-SLPTSKNWTFGPQDIDELIFMLSDSPGVMCRP 990 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R++ + A+ AC S+ G + EM +L+ M + + C HGRPT + Sbjct: 991 SRVKQMFASRACRKSVMIGTALNPSEMKKLITHMGEMDHPWNCPHGRPTMRHI 1043 >gi|209875525|ref|XP_002139205.1| DNA mismatch repair protein MutL [Cryptosporidium muris RN66] gi|209554811|gb|EEA04856.1| DNA mismatch repair protein MutL, putative [Cryptosporidium muris RN66] Length = 811 Score = 256 bits (653), Expect = 9e-66, Method: Composition-based stats. Identities = 119/418 (28%), Positives = 193/418 (46%), Gaps = 33/418 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I++L +++I +IAAGE++ RPS A+KELIENSLDA SS + + GG QI DNG+ Sbjct: 3 RIKRLPDEVIARIAAGEVVVRPSHAVKELIENSLDAGSSSISLQLKHGGLKGLQIIDNGY 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + P+ +R TSK+ D ++ TFGFRGEAL SI VS L++ S ++ Sbjct: 63 GIDKADFPLLCERFTTSKLRLLSDIDSLKTFGFRGEALASISYVSRLSITSMTDSSSCAF 122 Query: 120 QIAISGEKISSVRPVAM--NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + KI S GTI++ DLF+ +PARL L S E ++ +++++ I Sbjct: 123 TASFIDGKIISDITPVAANQRGTIIKFSDLFYNMPARLRSLGSSSEEYSMCLELVQKYCI 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNG-NFPERISQVIGEDFINNAVE-----------LN 225 + KV F+ + + + + I + G + + + + Sbjct: 183 EFYKVGFSVRKFGNTCLDLRTPGGDNIQREDVIQLLYGRELSKDLIYLNISSNINSHSSD 242 Query: 226 EKSNEITLQGYTGIPTFNRGNANQ--------FYVFINGRTVQDKFILSTIRTAYAETIP 277 KS E++L N +N +FIN R V I I AY T Sbjct: 243 VKSEELSLHSLIPKYNINLYMSNLNYRPKKSTVIIFINQRLVSSSSIKQAIDMAYQYT-- 300 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL 337 G V + +++ P +D NVHP KS ++ + +I I + KA+ S+S L Sbjct: 301 -GTQYWVFISIKVPPETIDPNVHPTKSKVQLTHDVLIAEIIQNRMIKALQ--DTSSSRSL 357 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQE----KLFLQENRLSTNDLLPSDDPTYSE 391 + ++SF P K T++Q+ + E+ + T + S D T+ Sbjct: 358 NVNDLNSFSDVKKPDKSSNKPTKVRTDSQQCSIREFTNSESNVKTAYKIYSIDGTFEN 415 >gi|17942778|pdb|1H7U|A Chain A, Hpms2-Atpgs gi|17942779|pdb|1H7U|B Chain B, Hpms2-Atpgs Length = 365 Score = 256 bits (653), Expect = 9e-66, Method: Composition-based stats. Identities = 87/352 (24%), Positives = 152/352 (43%), Gaps = 27/352 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF T+P R F ++ + E + V+ I Sbjct: 135 LMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCII 194 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNE---------- 226 + + + + T G + E I V G+ + + + + Sbjct: 195 SAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEE 254 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 255 YGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMY- 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 +YP VVL + +D VD+NV P K I + ++ + S+ + Sbjct: 314 NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDS 365 >gi|17942770|pdb|1EA6|A Chain A, N-Terminal 40kda Fragment Of Nhpms2 Complexed With Adp gi|17942771|pdb|1EA6|B Chain B, N-Terminal 40kda Fragment Of Nhpms2 Complexed With Adp Length = 364 Score = 256 bits (653), Expect = 9e-66, Method: Composition-based stats. Identities = 87/345 (25%), Positives = 150/345 (43%), Gaps = 27/345 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF T+P R F ++ + E + V+ I Sbjct: 135 LMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCII 194 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNE---------- 226 + + + + T G + E I V G+ + + + + Sbjct: 195 SAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEE 254 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 255 YGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMY- 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 +YP VVL + +D VD+NV P K I + ++ + S Sbjct: 314 NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTS 358 >gi|26450625|dbj|BAC42424.1| putative DNA mismatch repair protein PMS1 [Arabidopsis thaliana] Length = 733 Score = 256 bits (653), Expect = 1e-65, Method: Composition-based stats. Identities = 96/367 (26%), Positives = 174/367 (47%), Gaps = 13/367 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR ++ +I++I +G++I S A+KEL+ENSLDA ++ +E + G+ +FQ+ DNG G Sbjct: 17 IRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGEDYFQVIDNGCG 76 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ + +H TSK+ D D N+ T+GFRGEAL S+ A+ +LT+ +R Sbjct: 77 ISPTNFKVLALKHHTSKLEDFTDLLNLTTYGFRGEALSSLCALGNLTVETRTKNEPVATL 136 Query: 121 IAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + +++ + A GT V VR LF +P R F ++ + E + ++ A+ Sbjct: 137 LTFDHSGLLTAEKKTARQIGTTVTVRKLFSNLPVRSKEFKRNIRKEYGKLVSLLNAYALI 196 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN-EKSNEITLQG 235 V F S K+ + + G+ + I V G + ++ S + ++G Sbjct: 197 AKGVRFVCSNTTGKNPKSVVLNTQGRGSLKDNIITVFGISTFTSLQPVSICVSEDCRVEG 256 Query: 236 YTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 + P R A++ Y FINGR V + + Y +T +YPV +L + Sbjct: 257 FLSKPGQGTGRNLADRQYFFINGRPVDMPKV-KLVNELYKDT-SSRKYPVTILDFIVPGG 314 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 D+NV P K + F + T + + + + + + S ++++ +S D A + Sbjct: 315 ACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSSN--ASYIVNRFEENSEQPDKAGVS 372 Query: 354 HLPKYAT 360 K + Sbjct: 373 SFQKKSN 379 >gi|308490925|ref|XP_003107654.1| CRE-MLH-1 protein [Caenorhabditis remanei] gi|308250523|gb|EFO94475.1| CRE-MLH-1 protein [Caenorhabditis remanei] Length = 1082 Score = 256 bits (653), Expect = 1e-65, Method: Composition-based stats. Identities = 130/614 (21%), Positives = 244/614 (39%), Gaps = 68/614 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L + ++N++AAGE++ RP AIKEL+ENSLDA ++ + + GG Q++DNG G Sbjct: 4 IQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDNGKG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++ + +R TSK+ +D ++ T+GFRGEAL S+ VS + ++S+ Q Sbjct: 64 IERDDFDLVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVSKVNIVSKREDGKCAYQ 123 Query: 121 ----------IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITD 170 A G+ ++ +P A GT + DLF+ +P R N + + E+ ++ D Sbjct: 124 ANYLGEKQRKSAQDGKMLAPTKPAAGKNGTCITATDLFYNLPTRRNKMTTHGEESKMVHD 183 Query: 171 VIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE 230 I R AI P VSF +S+ ++ +GNF + ++G D + + L+ +S Sbjct: 184 TILRFAIHRPDVSFALHQNQSSDFRTK---GDGNFRNVVCTLLGRDLADTVLPLSLESTR 240 Query: 231 --ITLQGYTGIPTFNRGNANQFYV---------FINGRTVQDKFILSTIRTAYAETIPLG 279 G P + + N FINGR+V+ + I Sbjct: 241 LKFKFTGNVSKPITSATSKNSQNRKTSRSFFSVFINGRSVRCDILKHPIDEVLQNRSLFC 300 Query: 280 RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK-KGISTSSVLS 338 + V L LEID ++DVNVHP KS + F I I + +K ++ G + Sbjct: 301 Q--FVALHLEIDETRIDVNVHPTKSSVIFLEKEEIIEEIREYFEKFVSDIFGFEPRGNVK 358 Query: 339 KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 + + F P ++ + + + ++ + ++ + Sbjct: 359 DEEEAEFSFSQVPIINIQSIKSIEAIKKPSVSNEKEFKPSPTSWKTEKKRVDHMEVRTDS 418 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK----------MRQDFN 448 E ++ + + ++ + D ER+ + + + Sbjct: 419 KE---RKIDEFVVRCPGQKRPRRDSEDVFRDDVEDVDERIQRNQEFNDEVSMVSVASTVD 475 Query: 449 STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI---PAILS 505 SQ L E ++ E E L + + ++++RE+ + Sbjct: 476 RRLNESQDLGEDEELECATTHREFQFESLETLRK-----QIVSNASLSLRELIRTSTFVG 530 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI-RSGR----KMQSI----- 555 + +L + + + L++ I SI G ++ Sbjct: 531 SIDPETVLIQFGTSLFQMNFSAVLREFFYQI--------SIFSFGNYGSYRLDDEPPAVI 582 Query: 556 EMNRLLREMEKNPN 569 EM L+ E+ K Sbjct: 583 EMLELIGELSKTDE 596 >gi|58737033|dbj|BAD89425.1| postmeiotic segregation increased 2 nirs variant 1 [Homo sapiens] Length = 572 Score = 255 bits (652), Expect = 1e-65, Method: Composition-based stats. Identities = 87/352 (24%), Positives = 152/352 (43%), Gaps = 27/352 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF T+P R F ++ + E + V+ I Sbjct: 135 LMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCII 194 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNE---------- 226 + + + + T G + E I V G+ + + + + Sbjct: 195 SAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEE 254 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 255 YGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMY- 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 +YP VVL + +D VD+NV P K I + ++ + S+ + Sbjct: 314 NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDS 365 >gi|66358030|ref|XP_626193.1| MutL family ATpase [Cryptosporidium parvum Iowa II] gi|46227026|gb|EAK87976.1| MutL family ATpase [Cryptosporidium parvum Iowa II] Length = 817 Score = 255 bits (651), Expect = 2e-65, Method: Composition-based stats. Identities = 107/364 (29%), Positives = 177/364 (48%), Gaps = 28/364 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IRKLS+++I++IAAGE++ PS A+KEL+ENSLDA S + + GG QI+D+G Sbjct: 3 RIRKLSDEVISRIAAGEVVVSPSHALKELLENSLDAGSRNIILQLRKGGIQSLQISDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + PM +R TSK++ D ++ TFGFRGEAL SI VS L++ S+ ++ Sbjct: 63 GIDKNDFPMLCERFATSKLTTMKDIQSLKTFGFRGEALSSISFVSQLSITSKTEMSDCAY 122 Query: 120 QIAISGEKISS--VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + + S K+ S + GTIV++ DLF+ +P+R + S E D++++ I Sbjct: 123 RASFSDGKMISELEEVASAKRGTIVQINDLFYNMPSRQRAMGSASDEYARCLDLVQKYCI 182 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV--------------- 222 +P+VSF N + I + G + + + Sbjct: 183 EFPEVSFNVRKFGQNTNDLRTNGGVKTRKNVIGLLYGSNVVKELIQFTVSRDSERPRDLN 242 Query: 223 -----ELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP 277 EL+ K + + + Y +N N +FINGR V++ I I TAY T Sbjct: 243 KEKSNELSLKIPDFSAELYISGLGYNPKQ-NTLIIFINGRLVKNNAIKQAIETAYQYTKS 301 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL 337 + + I +D N+HP K+ + + T+I + I + + ++ S + VL Sbjct: 302 N---YWAFVSVRIPSETIDPNIHPTKNLVYISHETLISDAIQRKVMCSLQASNYSRNMVL 358 Query: 338 SKKM 341 +K Sbjct: 359 ERKP 362 >gi|149755407|ref|XP_001494013.1| PREDICTED: similar to PMS1 protein homolog 2 (DNA mismatch repair protein PMS2) [Equus caballus] Length = 916 Score = 255 bits (651), Expect = 2e-65, Method: Composition-based stats. Identities = 89/404 (22%), Positives = 168/404 (41%), Gaps = 29/404 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENS+DA ++ ++ + G +++DNG G Sbjct: 63 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLRLKDYGVDLIEVSDNGCG 122 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 123 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 182 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + +I GT V V+ LF+T+P R F ++ + E + V+ I Sbjct: 183 LVFDHNGRIVQKTLYPRPRGTTVSVQQLFYTLPVRHKEFQRNIKKEYAKMIQVLHAYCII 242 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE---------- 226 V + + + R + S + + E I V G+ + + + + Sbjct: 243 SAGVRVSCTNQVGQGKRQPVVCTSGSTSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEE 302 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 303 YGLSCSDALHNLFCISGFISRCTHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHMY- 361 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK--KGISTS 334 +YP VVL + +D VD+NV P K I + ++ + S+ + ++ + Sbjct: 362 NRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSEVNKLNVN 421 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 + + ++ + P + +E R T Sbjct: 422 QQPLLDTEGNLIKIHSAEVEQPLPEKQDRPASSRTRGEEKRAVT 465 Score = 150 bits (379), Expect = 7e-34, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 96/235 (40%), Gaps = 15/235 (6%) Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE------ATHYQLGIACAQI 413 +SL ++L QE + + + E E T + Q Sbjct: 677 SSLAKQIKRLHHQEQKRAGEQNYRRFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQF 736 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 + +II++ + IVDQHA E+ FE ++Q T + Q L+ P+ ++L A++ Sbjct: 737 NLGFIITKLDADIFIVDQHATDEKYNFEMLQQH---TVLQGQRLIAPQTLNLTAVNEAVL 793 Query: 474 MEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 +E+ E + G A I +P + PQ + ++I + DS Sbjct: 794 IENLEIFRKNGFDFVIDEGAPVTERAKLI-SLPTSKNWTFGPQDVDELIFMLSDSPGVMC 852 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R+ + A+ AC S+ G + + EM +L+ M + + C HGRPT + Sbjct: 853 RPSRVRQMFASRACRKSVMIGTALNASEMRKLITHMGEMDHPWNCPHGRPTMRHI 907 >gi|219116098|ref|XP_002178844.1| mutl-like protein 1 [Phaeodactylum tricornutum CCAP 1055/1] gi|217409611|gb|EEC49542.1| mutl-like protein 1 [Phaeodactylum tricornutum CCAP 1055/1] Length = 695 Score = 255 bits (651), Expect = 2e-65, Method: Composition-based stats. Identities = 102/337 (30%), Positives = 165/337 (48%), Gaps = 13/337 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L ++++++IAAGE+++RP +KEL+EN+LDA ++ V + GG + I DNG G Sbjct: 12 IQILPQEVVDKIAAGEVVQRPVSVVKELVENALDAGATEVIVTVEKGGLAKITIADNGGG 71 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++P+A RH TSK+ +DF+++ +FGFRGEAL S+ VSHL + SR P+ G + Sbjct: 72 IRPQDLPLAATRHATSKLRTTEDFAHLCSFGFRGEALASVSMVSHLCITSRVPEVKVGYK 131 Query: 121 IAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +A G K + S +P A PGT V V DLFF +P R E N I V++ +I Y Sbjct: 132 LAYRGGKPLQSPKPTARKPGTTVLVEDLFFNLPHRKVLRP--ADEYNKILTVLQHYSILY 189 Query: 180 PKVSF---TFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG- 235 + + K + +N + + D ++L I Sbjct: 190 AEQGIGLVCQKSGKKSTTDLNTSNAVAVLRSALDAGQANDDALRKLQLRATQQVIAQVFG 249 Query: 236 --YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 Q +FIN R V+ + + Y+E + P + L L++ P Sbjct: 250 SQLISHLQGFDSRGTQLVLFINSRLVECNGLKRVMEDIYSEYTKIK--PFLYLRLDVPPD 307 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 VDVNVHP K + I I +++ +++ G Sbjct: 308 TVDVNVHPTKKEVALLYLDEICKHISSQLRQTLSRAG 344 >gi|313637902|gb|EFS03221.1| DNA mismatch repair protein MutL [Listeria seeligeri FSL S4-171] Length = 380 Score = 255 bits (651), Expect = 2e-65, Method: Composition-based stats. Identities = 109/376 (28%), Positives = 178/376 (47%), Gaps = 9/376 (2%) Query: 227 KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 +S + + GY +P NR N N INGR +++ ++ I+ Y +P+GR+P++VL Sbjct: 4 ESLDFKISGYAILPEINRSNRNYISTIINGRFIKNFALVKAIQEGYHTLLPIGRFPIIVL 63 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH 346 +E+DP VDVNVHPAK +R + I Q I++A ++ + +SKK Sbjct: 64 QIEMDPIIVDVNVHPAKLEVRLSKEKELGQLISQMIKQAFHELQLIPDGEISKKQKEIQK 123 Query: 347 QDNAPKTHLPKYATSLTNT-QEKLFLQENRLSTNDLLPSDDPTY-------SEDNDPVEE 398 + T T K + E S ND+ +D + SE++ +E Sbjct: 124 XXXIQMSFEENKPKEETPTLFSKPSIPEYVPSDNDVPIENDFVFETAPVYTSEEHIEQKE 183 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 + Q+H YI +Q +GL I+DQHAA ER+ +E R+ Q LL Sbjct: 184 TTQERIPKMYPIGQMHATYIFAQNENGLYIIDQHAAQERIKYEFYREKIGEVSRELQELL 243 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P +++ E + E L +G+ E FG N+ IR P K ++LR+IID Sbjct: 244 VPIVLEFPTDEYVRLEEQKVKLEEVGVFLENFGQNSYIIRAHPTWFPKDEEEEMLREIID 303 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 E + +S + ++ E+ M+C SI++ + +M LL + + + C HGRP Sbjct: 304 EAL-TSPSISIHKLREDTAIMMSCKKSIKANHYLTMKDMETLLDTLREASDPFTCPHGRP 362 Query: 579 TFIKLKLSDIEKLFGR 594 I+ ++EK+F R Sbjct: 363 VIIQYSTYELEKMFKR 378 >gi|254571717|ref|XP_002492968.1| Protein involved in DNA mismatch repair and crossing-over during meiotic recombination [Pichia pastoris GS115] gi|238032766|emb|CAY70789.1| Protein involved in DNA mismatch repair and crossing-over during meiotic recombination [Pichia pastoris GS115] gi|328353019|emb|CCA39417.1| DNA mismatch repair protein mutL [Pichia pastoris CBS 7435] Length = 601 Score = 254 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 117/626 (18%), Positives = 237/626 (37%), Gaps = 67/626 (10%) Query: 1 MKI-RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I R+L + + + + + IK L+ENSLDA S+ + + + DN Sbjct: 1 MSIVRRLDKAVSLALKSNLQLNLIGDVIKGLVENSLDAGSTEIRISVQLDNIICIECEDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSK--IS-DDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQN 115 G G+ E+ + +SK + +D ++ T+GFRGE L S+ +S L + S+ + Sbjct: 61 GHGIPPSELEKIGSEYWSSKGVLKLEDLEDLKTYGFRGETLHSLSQISKALRISSKVLSS 120 Query: 116 NTGAQIAISGEKI------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLK--SEQVETNL 167 + + + GT+V++ LF+ +P R ++ S++ + Sbjct: 121 DRSFTTVYNNGTHVVSLTECDDYGIGSPQGTVVKITGLFYNLPVRRTYISNTSQKSISQQ 180 Query: 168 ITDVIRRMAIAYPKVSFTFSTIK------SNRYKMNFQSTNGNFPERISQVIGEDFINNA 221 I + + P +S + I+ + ++ + + +I + ++ Sbjct: 181 IKLALFPLCATNPDLSIKINLIEPDVSCEKSILSVSKAVSPDDRLSTSFDLIFGNMGSSM 240 Query: 222 VELNEKSNEITLQGYTG-IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---P 277 V L + G PTFN + ++F+N R V D+ + + I A+ Sbjct: 241 VPLQSSHMDYKADSIFGLNPTFNISHR---FIFLNKRLVMDERLYNLITRELAQLYKSQN 297 Query: 278 LGRYPVVVLLLEIDPRQ-VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 + R ++ P+ ++ P K+ + I K S Sbjct: 298 VHRPSFAFVVSFTGPQHPSELTQGPQKTINTVHEIQTLTYLTKCLIDKV--AVNYIGSLQ 355 Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 +K+MI SF + AP+ + + L + F +LS +DL Sbjct: 356 HNKRMIDSFKE--APEKNKTRKIQPLKDNISPFFCSNLKLSKDDL--------------- 398 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 + + I + L+ +DQHA ER+ EK+ Q++ + Sbjct: 399 ---SSVKLVGLMDQKFIVVTLVTKHQGTVLLALDQHACDERVKAEKLFQNYINNLSNCSV 455 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI--PQLLR 514 + DL E L + L GI+ + I + +P++L++ + L Sbjct: 456 AIENITWDLPEMVMNLFSTFEFSLSTWGIRFISL-NSRIILTHLPSVLTEGKLSHESLKS 514 Query: 515 DIIDEIIDSSTTYT---------------LQDRIENILATMACYGSIRSGRKMQSIEMNR 559 I+ + D + D I N++ ++AC +++ G + + + Sbjct: 515 GILQYLSDLEAGKKCPKPPGEKWFETLPFIPDMIINVVNSLACRSAVKFGTSLDTAQCRT 574 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKL 585 +++ ++ QC HGRP+ + L + Sbjct: 575 IIQNLKSCELPFQCAHGRPSMVPLTM 600 >gi|303389209|ref|XP_003072837.1| DNA mismatch repair protein MutL [Encephalitozoon intestinalis ATCC 50506] gi|303301980|gb|ADM11477.1| DNA mismatch repair protein MutL [Encephalitozoon intestinalis ATCC 50506] Length = 564 Score = 254 bits (649), Expect = 3e-65, Method: Composition-based stats. Identities = 117/559 (20%), Positives = 244/559 (43%), Gaps = 41/559 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+I++L +I++I+AGE+I RP +KE+IENSLDA S+ + I G S I DNG Sbjct: 1 MEIKRLPNDVISRISAGEVITRPYNILKEVIENSLDANSTHIAIKIGIDGLSL-TIEDNG 59 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E+ + +++CTSK++ +D ++ ++GFRGEAL SI S + + S+ +N G Sbjct: 60 DGIHEEDFELLCKQYCTSKLTKEEDLFSLSSYGFRGEALSSISRCSRIRVRSKRRENEIG 119 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + +I +++ + M G++VE++D+F+ AR ++ E + ++ ++ Sbjct: 120 HEAVYRDTEIVAIKGIGMKDGSVVEIKDIFYNNKAREKHFSKKRDEIREMMWLVGIYSVF 179 Query: 179 YPKVSFTFSTIKS--NRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 VSF K S + ++ +++ + + +G+ Sbjct: 180 NEDVSFDLFYGGKLQEIPKSKMYSGKDGSSNEDRVKMKIKMLDELYKVDGELLFLFDEGH 239 Query: 237 ---TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 P F+ +F+NGR V + + + Y I R P + L L I+ Sbjct: 240 LAIFSTPQFSLKKGVFI-LFVNGRLVVSQEMKEALFKVYRGLISDERQPFIYLELNIEKS 298 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 VDVN+HP+K + F N + + + I+ +NK +K + ++++ ++ Sbjct: 299 MVDVNIHPSKREVLFTNEESVIQRLYECIENKLNKMNYE------QKTLRPLPRESSFQS 352 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 + Y+ + + + +E L S +E + E +++ ++ Sbjct: 353 PIKVYSDPASQSIGECLEKEKTERREFSLFSLKKLRTE----IVELDSSFFKALNYVGAK 408 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 ++ I+ Q L+ + +++ + DF + + L P D+ + AL+ Sbjct: 409 DRDTILVQHGSSLLNCRTALLLKEYLYQTLISDFGN--FEKKKTLIPIESDIEDNMRALL 466 Query: 474 MEHDEDLHRLGIKAERFGPNAI---AIREI----PAILSKKNIP-----QLLRDIIDEII 521 ++ E N + I I P + + ++ + L++II+ I Sbjct: 467 NDY--------FSIEIVERNIVSVPIISTICIDLPTLWAGLDVKKDSEYETLKNIINTIS 518 Query: 522 DSSTTYTLQDRIENILATM 540 ++ + ++ N++ Sbjct: 519 TLYSSAEMSPKLFNVIKRK 537 >gi|149001723|ref|ZP_01826696.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP14-BS69] gi|147760181|gb|EDK67170.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP14-BS69] Length = 187 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 85/184 (46%), Positives = 121/184 (65%), Gaps = 2/184 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E + NQIAAGE+IERP+ +KEL+EN++DA SS++ I G QITDNG G Sbjct: 4 IIELPEMLANQIAAGEVIERPASVVKELVENAIDAGSSQIIIEIEEAGLKKVQITDNGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G + Sbjct: 64 IAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGTK 123 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + G ++ V P GT V V DLFF PARL ++KS+Q E + I D++ R+ +A+P Sbjct: 124 LVARGGEVEEVIPATSPVGTKVCVEDLFFNTPARLKYMKSQQAELSHIIDIVNRLGLAHP 183 Query: 181 KVSF 184 ++SF Sbjct: 184 EISF 187 >gi|17942780|pdb|1H7S|A Chain A, N-Terminal 40kda Fragment Of Human Pms2 gi|17942781|pdb|1H7S|B Chain B, N-Terminal 40kda Fragment Of Human Pms2 Length = 365 Score = 254 bits (648), Expect = 4e-65, Method: Composition-based stats. Identities = 87/345 (25%), Positives = 149/345 (43%), Gaps = 27/345 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF T+P R F ++ + E V+ I Sbjct: 135 LXFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKXVQVLHAYCII 194 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNE---------- 226 + + + + T G + E I V G+ + + + + Sbjct: 195 SAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEE 254 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 255 YGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHXY- 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 +YP VVL + +D VD+NV P K I + ++ + S Sbjct: 314 NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTS 358 >gi|73958129|ref|XP_536879.2| PREDICTED: similar to PMS1 protein homolog 2 (DNA mismatch repair protein PMS2) [Canis familiaris] Length = 876 Score = 254 bits (648), Expect = 4e-65, Method: Composition-based stats. Identities = 93/458 (20%), Positives = 180/458 (39%), Gaps = 37/458 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENS+DA ++ ++ + G F +++DNG G Sbjct: 25 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLKLKDYGVDFIEVSDNGCG 84 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI D D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 85 VKEENFEGLTLKHHTSKIQDFADLTQVETFGFRGEALSSLCALSDVTISTCHTSAKVGTR 144 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 +A KI P GT V V+ LF+T+P R F ++ + E + V+ I Sbjct: 145 LAFDHNGKIVQKTPHPRPRGTTVSVQQLFYTLPVRHKEFQRNIKKEYAKMVQVLHAYCII 204 Query: 179 YPKVSFTFSTI-KSNRYKMNFQ-STNGNFPERISQVIGEDFINNAVELNE---------- 226 + + S R ++ S + + E I V G+ + + + + Sbjct: 205 SVGIRISCSNQVGQGRRQLVVCTSGSSSVKENIGSVFGQKQLQSLIPFVQLPPSDSVCEE 264 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 + + G+ G + ++ + FIN R + + Y Sbjct: 265 YGLNRADVLHSRFHISGFISHCAHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHMY- 323 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI---------- 326 +YP +VL + +D +D+NV P K I + ++ + S+ Sbjct: 324 NRHQYPFIVLNISVDSECIDINVTPDKRQILLQEEKLLLAVLKTSLIAMFDSNVNKLTVS 383 Query: 327 NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDD 386 + + + K + + A K P + + + + R + + +++ Sbjct: 384 QQPLLDIEGHVIKTHQAEMDKPLAEKQDSPALFRTEGEEKRAVTISRLRENFSLRHTTEN 443 Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 + + + +H D Sbjct: 444 RSRGPQTPESRQISPRQKRHIQLPGALHSPCTPRPVPD 481 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 9/191 (4%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E T + Q + +II++ + IVDQHA E+ FE ++Q T + Q L Sbjct: 681 EISKTMFAEMEIIGQFNLGFIITKLKADIFIVDQHATDEKYNFEMLQQH---TVLQGQRL 737 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQL 512 + P+ ++L A+++E+ E + G A I +P + PQ Sbjct: 738 IAPQTLNLTAVNEAILIENLEIFRKNGFDFVIDEGAPVTERAKLI-SLPTSKNWTFGPQD 796 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + ++I + DS R+ + A+ AC S+ G + + EM +L+ M + + Sbjct: 797 IDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWN 856 Query: 573 CNHGRPTFIKL 583 C HGRPT + Sbjct: 857 CPHGRPTMRHI 867 >gi|328723290|ref|XP_001947410.2| PREDICTED: mismatch repair endonuclease PMS2-like [Acyrthosiphon pisum] Length = 364 Score = 254 bits (648), Expect = 4e-65, Method: Composition-based stats. Identities = 93/334 (27%), Positives = 159/334 (47%), Gaps = 17/334 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ +++ +++I +G+++ + A+KELIENSLDA ++ V + GK ++TDNG Sbjct: 4 QIKPINKLDVHKICSGQVVLNLATAVKELIENSLDAGATSVGIKLKEFGKDLVEVTDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + +H TSKI D D +++ TFGFRGEAL S+ A+S +T+ +R G Sbjct: 64 GVHPDNFEGLALKHHTSKIKDFADLTSVETFGFRGEALSSLCALSDVTVTTRHSSQECGT 123 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 ++ I PVA GT V + +LF ++P R F ++ + + + V+ + Sbjct: 124 KLVFDHTGNIKLKVPVAKQVGTAVTLSNLFSSLPVRHKEFHRNLKKDFGKMIQVVTGYCL 183 Query: 178 AYPKVSFTFSTI-KSNRYKMNFQSTNGNFPERISQVIGEDFINNAV---------ELNEK 227 +V + KS + + E IS + G N+ + E N+ Sbjct: 184 VATQVKLSCINQTKSMNNVLLSTHGSNTVLENISCIYGSKQANSLLVLKKVIPVDEENDI 243 Query: 228 SNEITLQGYTGIPTFN--RGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVV 285 N L GY N R + ++ + FIN R + ++ T+ Y + +YP V Sbjct: 244 PNIFELDGYISSCDHNGGRSSKDRQFYFINSRPCEPLKVIKTVNEVYHQY-NQNQYPFVY 302 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 L + I +VD+NV P K I N + + I Sbjct: 303 LNITIARAEVDINVTPDKRQIFLSNENYLVSIIK 336 >gi|225437328|ref|XP_002267393.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 937 Score = 253 bits (647), Expect = 5e-65, Method: Composition-based stats. Identities = 110/492 (22%), Positives = 201/492 (40%), Gaps = 15/492 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR +++ +++I +G++I S A+KEL+ENSLDA ++ +E + G+ +FQ+ DNG Sbjct: 11 TIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQEWFQVIDNGC 70 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ + +H TSK+ D D ++ TFGFRGEAL S+ A+ +LT+ +R + Sbjct: 71 GISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTVETRTKNESVAT 130 Query: 120 QIAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 + + + A GT V V+ LF +P R F ++ + E + ++ A+ Sbjct: 131 HLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKLISLLSAYAL 190 Query: 178 AYPKVS--FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK-SNEITLQ 234 V T +T K+ + + +G+ + I V G + N LN S+ + Sbjct: 191 IAGGVRLVCTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLEPLNICLSDSSKVD 250 Query: 235 GYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 G+ + R ++ + F+NGR V + + Y +YP+ ++ + Sbjct: 251 GFVSKSGYGSGRTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSR-QYPIAIMNFTVPT 309 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK 352 R DVNV P K I F + I + + + ++K + S S ++ Sbjct: 310 RAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETDNSELNP 369 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 ++S + LQE S + P+ + Sbjct: 370 PQTQILSSSKQLFPDGSDLQEEAHSEEQITEDQIPSKMVKSSTENMHAVKEMDHSYDKDS 429 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 I +++ + G+ D + + EK NS I Q L E++ Sbjct: 430 IEKDFSLR--VHGIKKAD---SFPKWDSEKTTMTINSDTIDHQVLSLSEMVVKGAVGNKG 484 Query: 473 IMEHDEDLHRLG 484 H + G Sbjct: 485 SSSHSSYIQSFG 496 Score = 139 bits (351), Expect = 9e-31, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 20/201 (9%) Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 + + Q + +II + L IVDQHAA E+ FE + ST + Q LL Sbjct: 711 KKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHL---AQSTVLNQQPLLR 767 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERF----GPNAIAIREIPAILSKKNIPQLLRD 515 P +DL E + H + + + G E ++ +P + + +++ Sbjct: 768 PLRLDLSPEEEVIASIHMDIIRKNGFALEEDLHAPPGQRFKLKAVPFSKNITFGVEDVKE 827 Query: 516 IIDEIIDSSTTYTL-------------QDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 +I + D ++ R+ +LA+ AC S+ G + EM R+L Sbjct: 828 LISTLADGQGECSILGTYKMDTCDSICPSRVRAMLASRACRSSVMIGDPLGRKEMQRILE 887 Query: 563 EMEKNPNSSQCNHGRPTFIKL 583 + + C HGRPT L Sbjct: 888 HLSDLKSPWNCPHGRPTMRHL 908 >gi|310128478|ref|XP_003120596.1| PREDICTED: mismatch repair endonuclease PMS2-like isoform 1 [Homo sapiens] gi|119575457|gb|EAW55055.1| PMS2 postmeiotic segregation increased 2 (S. cerevisiae) [Homo sapiens] Length = 725 Score = 253 bits (647), Expect = 5e-65, Method: Composition-based stats. Identities = 87/352 (24%), Positives = 152/352 (43%), Gaps = 27/352 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF T+P R F ++ + E + V+ I Sbjct: 135 LMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCII 194 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNE---------- 226 + + + + T G + E I V G+ + + + + Sbjct: 195 SAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEE 254 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 255 YGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMY- 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 +YP VVL + +D VD+NV P K I + ++ + S+ + Sbjct: 314 NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDS 365 >gi|269861251|ref|XP_002650338.1| DNA mismatch repair protein PMS1 [Enterocytozoon bieneusi H348] gi|220066221|gb|EED43713.1| DNA mismatch repair protein PMS1 [Enterocytozoon bieneusi H348] Length = 578 Score = 253 bits (646), Expect = 6e-65, Method: Composition-based stats. Identities = 125/599 (20%), Positives = 237/599 (39%), Gaps = 45/599 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I KLS I I A + I + +KEL+ENS+DA S+ ++ + + DNG G Sbjct: 2 ITKLSTSRIESIKAEQYIHNTFMIVKELVENSIDANSTVIKIFVN---VDLIIVEDNGNG 58 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIH------TFGFRGEALPSIGAVSHLTLMSRPPQNN 116 + + + TSKI + + T+GFRG+AL SI + + + + Sbjct: 59 ICINSLDNIGKFGYTSKIKTTYDVLEYKPEQFTYGFRGQALHSIKKMGVTEITTSILEEP 118 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE-QVETNLITDVIRRM 175 +A G +++ +LF P R + + + LI++ + M Sbjct: 119 G--IGIKKNLTTGKSEKLAKEKGMTIKITNLFENYPIRKKYNNTYYKKHILLISEYLESM 176 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 I + T K+ ++ F + + + G+ + +L Sbjct: 177 CIVFNGTFVFNYTEKTKTKELIFNGEKTTLRDFLVRRYGKQIFEHKCDLFNIYF------ 230 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 F N+ +F R ++ + I + P VL ++ + Sbjct: 231 ------FPVSLKNERLIFSGIRLIK-TSLSRLIEKTCLKF--KDILPSYVLFIKTNTD-- 279 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 +NV P K I + N ++ + ++Q I+ ++ S S K +SS Q+ + Sbjct: 280 -INVSPDKMEIIYHNKQLLESLLLQKIEIFMSNNYFSDSVDYKKIRLSSISQNENNNSIS 338 Query: 356 PKYATSLTNT-QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES------EATHYQLGI 408 S+ +K Q+ + + D D V+E E + Sbjct: 339 QSQNHSIETFLTQKNTEQDTKPAIIDEDILDIKPVKNTIQFVKEENIDFTIEKADFNKME 398 Query: 409 ACAQIHQNYIIS----QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 Q ++ +I+ Q L++VDQHAA E FE ++ F I+ Q+L+TP + Sbjct: 399 VIGQFNKGFILCKLIKQDKSYLILVDQHAADEIKNFEYLKNTFT---ISKQSLVTPIKLT 455 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 L + ++ EH+ L++ G + ++ ++ +P L D+I ++ DSS Sbjct: 456 LNSIQKLILKEHNTILNKNGFIVDV-HNDSFWLKTVPQYKGHCFSKDDLYDLISKLKDSS 514 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + + E+I+A+ AC S G + ++ +++ + +C HGRPTFI + Sbjct: 515 DPNIMCSKFEDIMASKACRQSEMIGTHLPLSKLKNIVQNLSLLNIPWKCPHGRPTFIII 573 >gi|297743867|emb|CBI36837.3| unnamed protein product [Vitis vinifera] Length = 854 Score = 253 bits (646), Expect = 6e-65, Method: Composition-based stats. Identities = 104/466 (22%), Positives = 195/466 (41%), Gaps = 12/466 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR +++ +++I +G++I S A+KEL+ENSLDA ++ +E + G+ +FQ+ DNG Sbjct: 11 TIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQEWFQVIDNGC 70 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ + +H TSK+ D D ++ TFGFRGEAL S+ A+ +LT+ +R + Sbjct: 71 GISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTVETRTKNESVAT 130 Query: 120 QIAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 + + + A GT V V+ LF +P R F ++ + E + ++ A+ Sbjct: 131 HLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKLISLLSAYAL 190 Query: 178 AYPKVS--FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK-SNEITLQ 234 V T +T K+ + + +G+ + I V G + N LN S+ + Sbjct: 191 IAGGVRLVCTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLEPLNICLSDSSKVD 250 Query: 235 GYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 G+ + R ++ + F+NGR V + + Y +YP+ ++ + Sbjct: 251 GFVSKSGYGSGRTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSR-QYPIAIMNFTVPT 309 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK 352 R DVNV P K I F + I + + + ++K + S S ++ Sbjct: 310 RAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETDNSELNP 369 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 ++S + LQE S + P+ + Sbjct: 370 PQTQILSSSKQLFPDGSDLQEEAHSEEQITEDQIPSKMVKSSTENMHAVKEMDHSYDKDS 429 Query: 413 IHQNYIISQTTDGLV--IVDQHAAHERLIFEKMRQDFNSTKITSQT 456 I +++ + L + HA R + + ++ I S+ Sbjct: 430 IEKDFSLRVHEMVLKKNNSEMHALVSRSFVNHQKTNDSAGIIESEP 475 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 20/201 (9%) Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 + + Q + +II + L IVDQHAA E+ FE + ST + Q LL Sbjct: 628 KKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHL---AQSTVLNQQPLLR 684 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERF----GPNAIAIREIPAILSKKNIPQLLRD 515 P +DL E + H + + + G E ++ +P + + +++ Sbjct: 685 PLRLDLSPEEEVIASIHMDIIRKNGFALEEDLHAPPGQRFKLKAVPFSKNITFGVEDVKE 744 Query: 516 IIDEIIDSSTTYTL-------------QDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 +I + D ++ R+ +LA+ AC S+ G + EM R+L Sbjct: 745 LISTLADGQGECSILGTYKMDTCDSICPSRVRAMLASRACRSSVMIGDPLGRKEMQRILE 804 Query: 563 EMEKNPNSSQCNHGRPTFIKL 583 + + C HGRPT L Sbjct: 805 HLSDLKSPWNCPHGRPTMRHL 825 >gi|302881957|ref|XP_003039889.1| hypothetical protein NECHADRAFT_50420 [Nectria haematococca mpVI 77-13-4] gi|256720756|gb|EEU34176.1| hypothetical protein NECHADRAFT_50420 [Nectria haematococca mpVI 77-13-4] Length = 1021 Score = 253 bits (646), Expect = 7e-65, Method: Composition-based stats. Identities = 89/394 (22%), Positives = 166/394 (42%), Gaps = 31/394 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+++ + ++QI +G++I +KEL+ENS+DA ++ ++ G ++ DNG Sbjct: 3 TIKQIDGRTVHQIQSGQVIVDLCSVVKELVENSVDAGATSIDVRFKNQGLDLIEVADNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G+ P +H TSK+S D S + TFGFRGEAL S+ A+S LT+ + G Sbjct: 63 GIAPANYPSVALKHHTSKLSSYSDISTLQTFGFRGEALASLCALSVLTVTTCQAGEAPKG 122 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++++ K+S VA + GT V V LF +P R ++ + E N + ++ + A Sbjct: 123 SKLSFEPSGKLSGTAVVAASKGTTVSVERLFHNLPVRRRELERNIKREWNKVIALLNQYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFI---------------- 218 + F+ S + +M ST GN + I + G + Sbjct: 183 CIQTNLKFSVSQQPTKGKRMQLFSTKGNPTTRDNIINIFGAKTMTVLVPLDLKLEMQPSK 242 Query: 219 -----NNAVELNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTA 271 + V+ + S E+ + G+ P+ R ++ F+NGR Sbjct: 243 VSPALQSDVKDSGSSKEVRIVGHVSRPSHGDGRQTPDRQMFFVNGRPCGLPQFAKAFNEV 302 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 Y + P ++ +++D DVNV P K I + + + + S+ + + Sbjct: 303 YRSY-NASQSPFILADIQLDTHMYDVNVSPDKRSILLHDQNELLDNLRTSLTDLFDSQNY 361 Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNT 365 S + + + T + + +N+ Sbjct: 362 SVPTAQLMTPKPNLEKQINRATPAGSLSEARSNS 395 Score = 137 bits (344), Expect = 7e-30, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 14/171 (8%) Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 D L IVDQHA E+ FE+++ + + SQ L+ P+ ++L E ++M++ + Sbjct: 829 HDELFIVDQHATDEKYNFERLQ---QAQTVQSQRLVHPKRLELTALEEEIVMQNISAIEA 885 Query: 483 LGIKA-------ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY---TLQDR 532 G K E G + +P ++I + + S+ + Sbjct: 886 NGFKVHVDMSGDEPVGSRC-EVLALPMSREVTFTLTDFEELIALLGEESSESKHVPRPSK 944 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + + A+ AC S+ G+ + +M L+R M C HGRPT L Sbjct: 945 VRKMFASRACRSSVMIGKPLTQGQMETLVRHMADLDKPWNCPHGRPTMRHL 995 >gi|56912184|ref|NP_958476.2| PMS1 protein homolog 1 [Danio rerio] gi|22204384|emb|CAD43440.1| SI:dZ72B14.2 (novel protein similar to human postmeiotic segregation increased 1-like protein (PMSL1)) [Danio rerio] Length = 896 Score = 253 bits (646), Expect = 7e-65, Method: Composition-based stats. Identities = 94/415 (22%), Positives = 184/415 (44%), Gaps = 30/415 (7%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L + + + + ++I +KELIENSLDA SS +E + G ++ DNG G+ Sbjct: 2 KALPPETVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + ++ + +H TSKI +D + T+GFRGEAL SI A+S + + ++ ++ Q Sbjct: 62 KATDVSVMAVKHYTSKISCHEDLEQLETYGFRGEALASICAISEVIITTKTADDDFSIQY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 ++ +I S +P + GT V +LF +P R + K + E + +++ A+ Sbjct: 122 SVDHNGQIVSQKPSHLGQGTTVCAANLFKNLPVRRQYYSNTKKCKDELKRVQNLLMAYAV 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE--LNEKSNEITLQG 235 P++ T S K+ ++ +S + + V+G + N + +++ EIT+ G Sbjct: 182 IKPELRVTLSHNKAVVWQ---KSRVSDHRTALMAVLGAASVANMLPVQHHQEQPEITIDG 238 Query: 236 YTGIP-----TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG-----RYPVVV 285 + P + + ++ ++F+N R V K IL I+ Y RYP + Sbjct: 239 FFPKPGSDLNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQSNSESVSRRYPTFM 298 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI---------IQSIQKAINKKGISTSSV 336 + + I VDVN+ P K+ + +N + + + ++ + G Sbjct: 299 MNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLYGYSNGEENLKTAGNPPDVT 358 Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + + + LP+ ++S Q+ N +T+ S+D + Sbjct: 359 SLDEPKRTSPDISLKHPELPEDSSSNAEKQDGELSLSNTANTSSSSISEDWVINR 413 >gi|330800737|ref|XP_003288390.1| hypothetical protein DICPUDRAFT_152626 [Dictyostelium purpureum] gi|325081572|gb|EGC35083.1| hypothetical protein DICPUDRAFT_152626 [Dictyostelium purpureum] Length = 956 Score = 253 bits (645), Expect = 8e-65, Method: Composition-based stats. Identities = 94/400 (23%), Positives = 164/400 (41%), Gaps = 32/400 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + ++ +N I +G++I SIA+KELIENS+DA ++ +E + G+ ++ DNG G Sbjct: 2 IKAIDKESVNNICSGQVIFDLSIAVKELIENSIDAGATSIEIRLKEYGEEIIEVIDNGSG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +H TSK+ D + TFGFRGEAL S+ A+S++T+++R + Sbjct: 62 VEPSNFEALTMKHYTSKLEQFSDLLTVETFGFRGEALSSLCALSNVTVITRTANYPMAQK 121 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLK-SEQVETNLITDVIRRMAIA 178 + + + KI S P+A GT V++ +LF +P R K + + E + +I+ A+ Sbjct: 122 LVFATDGKIMSQSPIAREVGTTVQLINLFKKLPVRYQEFKRNIKKEYTKLQTIIQAYALI 181 Query: 179 YPKVSFTFSTI---KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 T ++ N + I+ + G + E N + G Sbjct: 182 STGKRITCYNQAGKAQRNCVISTSGGNSTLRDNIASIFGSKMSQSLDEFTASDNLFKVNG 241 Query: 236 YTGI-------------------------PTFNRGNANQFYVFINGRTVQDKFILSTIRT 270 + +R A++ + FINGR + + I T Sbjct: 242 LISKIGLGNGHGQSIGSQPSQSNGAIQSLSSLSRSCADRQFFFINGRPFEHSKLAKEINT 301 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 Y + G YPVVV +E DVNV P K I + + + I ++ K Sbjct: 302 LYHQFHKRGAYPVVVFNIETPTDNYDVNVTPDKRTIFIQKESQLLLLISDGLKTMWEKVQ 361 Query: 331 ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLF 370 + +D K S ++ ++ Sbjct: 362 SIFDPSAPNSLTFDEDEDETIKKKNFSIQQSKISSFPNIY 401 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 10/188 (5%) Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL-TPE 461 +++ I Q + +II++ + L I+DQHAA E+ FE + S +I+SQ L+ Sbjct: 748 YFKQMIVIGQFNLGFIIAKLGNDLFIIDQHAADEKYNFEML---SKSLEISSQPLIKPDP 804 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKNIPQLLRDII 517 + DL E +I+E+ + + G K E N I + P I + + + ++I Sbjct: 805 LSDLTCEEEMIIIENIDLFKKNGFKFIIDPEAPPRNKIQLSAFPMIHGQTFGIKDVYELI 864 Query: 518 DEIIDSSTTYTLQD--RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 + +S ++ R+ +LA+ AC SI G + EM +L + N C H Sbjct: 865 YLLKESPIPGSVTKIPRLNTLLASKACRKSIMVGNSLCHKEMKDVLNNLSTLDNPWCCPH 924 Query: 576 GRPTFIKL 583 GRPT L Sbjct: 925 GRPTMRHL 932 >gi|169145696|emb|CAQ15724.1| PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Danio rerio] gi|169154365|emb|CAQ13467.1| PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Danio rerio] Length = 896 Score = 253 bits (645), Expect = 8e-65, Method: Composition-based stats. Identities = 93/415 (22%), Positives = 184/415 (44%), Gaps = 30/415 (7%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L + + + + ++I +KELIENSLDA SS +E + G ++ DNG G+ Sbjct: 2 KALPPETVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + ++ + +H TSKI +D + T+GFRGEAL SI A+S + + ++ ++ Q Sbjct: 62 KATDVSVMAVKHYTSKISCHEDLEQLETYGFRGEALASICAISEVIITTKTADDDFSIQY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 ++ +I S +P + GT V +LF +P R + K + E + +++ A+ Sbjct: 122 SVDHNGQIVSQKPSHLGQGTTVCAANLFKNLPVRRQYYSNTKKCKDELKRVQNLLMAYAV 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE--LNEKSNEITLQG 235 P++ T S K+ ++ +S + + V+G + N + +++ EI + G Sbjct: 182 IKPELRVTLSHNKAVVWQ---KSRVSDHRTALMAVLGAASVANMLPVQHHQEQPEIHIDG 238 Query: 236 YTGIP-----TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG-----RYPVVV 285 + P + + ++ ++F+N R V K IL I+ Y RYP + Sbjct: 239 FFPKPGSDLNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQSNSESVSRRYPTFM 298 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI---------IQSIQKAINKKGISTSSV 336 + + I VDVN+ P K+ + +N + + + ++ + G + Sbjct: 299 MNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLYGYSNGEENLKTAGNPSDVT 358 Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + + + LP+ ++S Q+ N +T+ S+D + Sbjct: 359 SLDEPKRTSPDISLKHPELPEDSSSNAEKQDGELSLSNTANTSSSSISEDWVINR 413 >gi|317373266|sp|P54278|PMS2_HUMAN RecName: Full=Mismatch repair endonuclease PMS2; AltName: Full=DNA mismatch repair protein PMS2; AltName: Full=PMS1 protein homolog 2 gi|41350089|gb|AAS00390.1| unknown [Homo sapiens] Length = 862 Score = 253 bits (645), Expect = 9e-65, Method: Composition-based stats. Identities = 87/352 (24%), Positives = 152/352 (43%), Gaps = 27/352 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF T+P R F ++ + E + V+ I Sbjct: 135 LMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCII 194 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNE---------- 226 + + + + T G + E I V G+ + + + + Sbjct: 195 SAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEE 254 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 255 YGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMY- 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 +YP VVL + +D VD+NV P K I + ++ + S+ + Sbjct: 314 NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDS 365 Score = 150 bits (378), Expect = 7e-34, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 133/354 (37%), Gaps = 20/354 (5%) Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD- 296 G + A+ + V + ++++ + P+ + Sbjct: 512 GSHCSSEYAASSPGDRGSQEHVDSQEKAPKTDDSFSDVDCHSNQEDTGCKFRVLPQPTNL 571 Query: 297 --VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 N K + I ++ + + ++ ++ K+ + + Sbjct: 572 ATPNTKRFKKEEILSSSD-ICQKLVNTQDMSASQVDVAV------KINKKVVPLDFSMSS 624 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 L K L + ++ ++N + + +E ++ +E T + Q + Sbjct: 625 LAKRIKQLHHEAQQSEGEQNYRKFRAKICPGENQAAE-DELRKEISKTMFAEMEIIGQFN 683 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +II++ + + IVDQHA E+ FE ++Q T + Q L+ P+ ++L A+++ Sbjct: 684 LGFIITKLNEDIFIVDQHATDEKYNFEMLQQH---TVLQGQRLIAPQTLNLTAVNEAVLI 740 Query: 475 EHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 E+ E + G A I +P + PQ + ++I + DS Sbjct: 741 ENLEIFRKNGFDFVIDENAPVTERAKLI-SLPTSKNWTFGPQDVDELIFMLSDSPGVMCR 799 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R++ + A+ AC S+ G + + EM +L+ M + + C HGRPT + Sbjct: 800 PSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHI 853 >gi|62739886|gb|AAH93921.1| PMS2 postmeiotic segregation increased 2 (S. cerevisiae) [Homo sapiens] Length = 862 Score = 252 bits (644), Expect = 1e-64, Method: Composition-based stats. Identities = 87/352 (24%), Positives = 152/352 (43%), Gaps = 27/352 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF T+P R F ++ + E + V+ I Sbjct: 135 LMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCII 194 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNE---------- 226 + + + + T G + E I V G+ + + + + Sbjct: 195 SAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEE 254 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 255 YGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMY- 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 +YP VVL + +D VD+NV P K I + ++ + S+ + Sbjct: 314 NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDS 365 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 133/354 (37%), Gaps = 20/354 (5%) Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD- 296 G + A+ + V + ++++ + P+ + Sbjct: 512 GSHCSSEYAASSPGDRGSQEHVDSQEKAPETDDSFSDVDCHSNQEDTGCKFRVLPQPTNL 571 Query: 297 --VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 N K + I ++ + + ++ ++ K+ + + Sbjct: 572 ATPNTKRFKKEEILSSSD-ICQKLVNTQDMSASQVDVAV------KINKKVVPLDFSISS 624 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 L K L + ++ ++N + + +E ++ +E T + Q + Sbjct: 625 LAKRIKQLHHEAQQSEGEQNYRKFRAKICPGENQAAE-DELRKEISKTMFAEMEIIGQFN 683 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +II++ + + IVDQHA E+ FE ++Q T + Q L+ P+ ++L A+++ Sbjct: 684 LGFIITKLNEDIFIVDQHATDEKYNFEMLQQH---TVLQGQRLIAPQTLNLTAVNEAVLI 740 Query: 475 EHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 E+ E + G A I +P + PQ + ++I + DS Sbjct: 741 ENLEIFRKNGFDFVIDENAPVTERAKLI-SLPTSKNWTFGPQDVDELIFMLSDSPGVMCR 799 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R++ + A+ AC S+ G + + EM +L+ M + + C HGRPT + Sbjct: 800 PSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHI 853 >gi|4505913|ref|NP_000526.1| mismatch repair endonuclease PMS2 isoform a [Homo sapiens] gi|535515|gb|AAA63923.1| homolog of yeast mutL gene [Homo sapiens] gi|746341|prf||2017356B PMS2 gene Length = 862 Score = 252 bits (644), Expect = 1e-64, Method: Composition-based stats. Identities = 87/352 (24%), Positives = 152/352 (43%), Gaps = 27/352 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF T+P R F ++ + E + V+ I Sbjct: 135 LMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCII 194 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNE---------- 226 + + + + T G + E I V G+ + + + + Sbjct: 195 SAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEE 254 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 255 YGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMY- 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 +YP VVL + +D VD+NV P K I + ++ + S+ + Sbjct: 314 NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDS 365 Score = 150 bits (378), Expect = 8e-34, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 133/354 (37%), Gaps = 20/354 (5%) Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD- 296 G + A+ + V + ++++ + P+ + Sbjct: 512 GSHCSSEYAASSPGDRGSQEHVDSQEKAPETDDSFSDVDCHSNQEDTGCKFRVLPQPTNL 571 Query: 297 --VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 N K + I ++ + + ++ ++ K+ + + Sbjct: 572 ATPNTKRFKKEEILSSSD-ICQKLVNTQDMSASQVDVAV------KINKKVVPLDFSMSS 624 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 L K L + ++ ++N + + +E ++ +E T + Q + Sbjct: 625 LAKRIKQLHHEAQQSEGEQNYRKFRAKICPGENQAAE-DELRKEISKTMFAEMEIIGQFN 683 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +II++ + + IVDQHA E+ FE ++Q T + Q L+ P+ ++L A+++ Sbjct: 684 LGFIITKLNEDIFIVDQHATDEKYNFEMLQQH---TVLQGQRLIAPQTLNLTAVNEAVLI 740 Query: 475 EHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 E+ E + G A I +P + PQ + ++I + DS Sbjct: 741 ENLEIFRKNGFDFVIDENAPVTERAKLI-SLPTSKNWTFGPQDVDELIFMLSDSPGVMCR 799 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R++ + A+ AC S+ G + + EM +L+ M + + C HGRPT + Sbjct: 800 PSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHI 853 >gi|260801098|ref|XP_002595433.1| hypothetical protein BRAFLDRAFT_69265 [Branchiostoma floridae] gi|229280679|gb|EEN51445.1| hypothetical protein BRAFLDRAFT_69265 [Branchiostoma floridae] Length = 429 Score = 252 bits (644), Expect = 1e-64, Method: Composition-based stats. Identities = 90/359 (25%), Positives = 156/359 (43%), Gaps = 29/359 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + ++QI +G+++ + A+KEL+ENSLDA ++ ++ + G ++ DNG Sbjct: 4 PIQPIDRHSVHQICSGQVVLNLATAMKELVENSLDAGATNIDIRLKEYGSELLEVVDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +H TSK+ D D +++ TFGFRGEAL S+ A+S L + + G Sbjct: 64 GVEESNFEGLTLKHHTSKLQDFSDLTSVETFGFRGEALSSLCALSDLCITTCHKNAYVGT 123 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 ++ + K+ P A GT V ++ +F T+P R FL++ + E + + V+ I Sbjct: 124 KLVYNHNGKLIQKTPCARQQGTTVTIQQIFCTLPVRHKEFLRNLKKEYSRMLTVLYAYCI 183 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGED----------------FIN 219 V T + + STNG N E ++ V G Sbjct: 184 ISTNVRITCTNQAGKGKRTTVVSTNGNVNMKENVTNVFGPKQLSGLLQFVQNRPSQEVAE 243 Query: 220 NAVELNEKSNEITLQGYTGIPTFNRGN--ANQFYVFINGRTVQDKFILSTIRTAYAETIP 277 + ++ GY + +G A++ Y FIN R + + Y Sbjct: 244 EMGVKGGNTELFSITGYLSTCSHGQGRGSADRQYFFINKRPCDLPKVSKVVNEVYHMY-N 302 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 +YP VVL + + VDVNV P K + + + I + ++ + T+SV Sbjct: 303 RHQYPFVVLDISLARDSVDVNVTPDKRQVWLQEERTLLAII----KTSLMQMYEPTASV 357 >gi|557470|gb|AAA50390.1| similar to S. cerevisiae PMS1 Swiss-Prot Accession Number P14242, S. cerevisiae MLH1 GenBank Accession Number U07187, E. coli MUTL Swiss-Prot Accession Number P23367, Salmonella typhimurium MUTL Swiss-Prot Accession Number P14161, Streptococcus pneumoniae Swiss-Prot Accession Number P14160 [Homo sapiens] gi|189065468|dbj|BAG35307.1| unnamed protein product [Homo sapiens] gi|306921511|dbj|BAJ17835.1| PMS2 postmeiotic segregation increased 2 [synthetic construct] Length = 862 Score = 252 bits (644), Expect = 1e-64, Method: Composition-based stats. Identities = 87/352 (24%), Positives = 152/352 (43%), Gaps = 27/352 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF T+P R F ++ + E + V+ I Sbjct: 135 LMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCII 194 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNE---------- 226 + + + + T G + E I V G+ + + + + Sbjct: 195 SAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEE 254 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ T G + ++ + FIN R + + Y Sbjct: 255 YGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMY- 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 +YP VVL + +D VD+NV P K I + ++ + S+ + Sbjct: 314 NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDS 365 Score = 150 bits (378), Expect = 8e-34, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 133/354 (37%), Gaps = 20/354 (5%) Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD- 296 G + A+ + V + ++++ + P+ + Sbjct: 512 GSHCSSEYAASSPGDRGSQEHVDSQEKAPETDDSFSDVDCHSNQEDTGCKFRVLPQPTNL 571 Query: 297 --VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 N K + I ++ + + ++ ++ K+ + + Sbjct: 572 ATPNTKRFKKEEILSSSD-ICQKLVNTQDMSASQVDVAV------KINKKVVPLDFSMSS 624 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 L K L + ++ ++N + + +E ++ +E T + Q + Sbjct: 625 LAKRIKQLHHEAQQSEGEQNYRKFRAKICPGENQAAE-DELRKEISKTMFAEMEIIGQFN 683 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +II++ + + IVDQHA E+ FE ++Q T + Q L+ P+ ++L A+++ Sbjct: 684 LGFIITKLNEDIFIVDQHATDEKYNFEMLQQH---TVLQGQRLIAPQTLNLTAVNEAVLI 740 Query: 475 EHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 E+ E + G A I +P + PQ + ++I + DS Sbjct: 741 ENLEIFRKNGFDFVIDENAPVTERAKLI-SLPTSKNWTFGPQDVDELIFMLSDSPGVMCR 799 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R++ + A+ AC S+ G + + EM +L+ M + + C HGRPT + Sbjct: 800 PSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHI 853 >gi|226286592|gb|EEH42105.1| DNA mismatch repair protein pms1 [Paracoccidioides brasiliensis Pb18] Length = 1067 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 102/516 (19%), Positives = 194/516 (37%), Gaps = 34/516 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I +KEL+ENSLDA ++ ++ G ++ DNG Sbjct: 3 TIKAIEARSVHQIQSGQVIIDLCSVVKELVENSLDAGATSIDIRFKNNGLDLIEVQDNGK 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPP-QNNTG 118 G++ ++ +H TSK+S DD S++ +FGFRGEAL S+ A+S+ +++ Q Sbjct: 63 GISPDDYETVALKHYTSKLSKLDDLSSLQSFGFRGEALSSLCALSNFHIVTAQAHQAPKA 122 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 +++ K+ + VA GT V +LF +P R K+ + E + ++ A Sbjct: 123 SKLEFEISGKLKDTQVVAGQRGTTASVENLFNRLPVRRRELEKNIKREYGKVLGLLHAYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELN--------- 225 V F S + +T N E IS + G + L+ Sbjct: 183 CVSTGVRFNVKNQMSKGKNVLVFATKSNATTKENISNIYGAKSLLALTPLDLELEFQPSA 242 Query: 226 ----------EKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 +++N+I +QG+ P F R ++ F+N R I Y Sbjct: 243 TNGKSIRGGIQEANKIFIQGHISKPIFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYK 302 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 + + P + ++D DVNV P K I + + + S+ + ++ + Sbjct: 303 SF-NISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGTLIESLKTSLTELFERQDQTV 361 Query: 334 SSVLSKKMISSFHQDNAPKTH--LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 L S+ H+ + T L + +N ++ + Q+ + Sbjct: 362 PQSLIPGKQSTLHRPSGKDTASVLASTKPAESNRAKQSYKQDGGEDEERDEEGEQRAMRT 421 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 E T ++ Q T+ ++ A +R+ + + Sbjct: 422 FVQRFTERSKTLPEIPETQQNEDGM-ESRQLTEDHSATNEDA--QRVDLATLEATEIAPS 478 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 + L A E ++ LG Sbjct: 479 QYPTREIKGSRPSLSTPPTAPSDEQADEQTNLGFTL 514 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 31/195 (15%) Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I+++ L Sbjct: 836 HKDDELFIIDQHASDEKYNFERLQ---AETVVQNQRLVKPKTLDLTAVEEEIIIDNLPAL 892 Query: 481 HRLGI--KAERFGPNAI----AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT------ 528 + G + +R G I + +P + L ++I + +S + Sbjct: 893 EKNGFIVEVDRSGDEPIGRRCKLTSLPLSKEVVFNIRDLEELIVLLGESPQAQSAPSPSS 952 Query: 529 ---------------LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 ++ + A AC SI G+ + + +M +++R M C Sbjct: 953 FSTLSSSPLTSKYVPRPSKVRKMFAMRACRSSIMIGKSLTAKQMGKVVRHMGMIDKPWNC 1012 Query: 574 NHGRPTFIKL-KLSD 587 HGRPT L L + Sbjct: 1013 PHGRPTMRHLMSLGE 1027 >gi|218674922|ref|ZP_03524591.1| DNA mismatch repair protein [Rhizobium etli GR56] Length = 175 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 102/175 (58%), Positives = 135/175 (77%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+LSE +INQIAAGE+IERP+ A KELIEN+LDA ++R+E AGGGK+ +++DNG Sbjct: 1 MAIRQLSETLINQIAAGEVIERPASAAKELIENALDAGATRIEIATAGGGKALLRVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 GM + ++ +AV+RHCTSKIS+ +I T GFRGEALPSIG+V+ L++ SR + G + Sbjct: 61 SGMEAADLELAVRRHCTSKISETLEDIRTLGFRGEALPSIGSVARLSIASRRRDSAGGHE 120 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 I ++G KI +RP A NPGTIVEVRDLFF PARL FLKSE+ E IT++++RM Sbjct: 121 ITVAGGKIVHLRPAAANPGTIVEVRDLFFATPARLKFLKSEKAEAGAITEIVKRM 175 >gi|89269106|emb|CAJ81837.1| PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Xenopus (Silurana) tropicalis] Length = 674 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 83/336 (24%), Positives = 160/336 (47%), Gaps = 19/336 (5%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 L I +++ ++I +KEL+EN+LDA ++ +E + G ++ DNG G+ Sbjct: 2 HCLPSATIRLLSSSQVITSVVSVVKELVENALDANATSIEIKLENFGFDKIEVRDNGKGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 S++ P+ +H TSKI DD + T+GFRGEAL SI +V+ + + ++ +++ Sbjct: 62 KSDDTPVMGVKHYTSKINSHDDLETLETYGFRGEALASICSVAEVHIATKTLEDDFSKLY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + + S +P + GT V V LF +P R + K + E I +++ I Sbjct: 122 ILDSSGHVVSQKPSHLGQGTTVSVHKLFKNLPVRKQYYSTIKKCKEEIRNIQELLMAYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE--KSNEITLQG 235 P + F+ K+ ++ +S + V+G +N V + + +I + G Sbjct: 182 VTPNLRILFTNNKALVWQ---KSKTSDHKMAFMSVVGSAIMNCMVPIQYQSEDPKIFING 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR---YPVVVLL 287 Y P + ++ + ++FIN R + K IL +R + +++ G YPV + Sbjct: 239 YLPKPYADNTTTSLSSSEKSFLFINRRPIYHKEILKMVRWYHNQSLNKGTPRCYPVFFMN 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ 323 +E+ +DVN+ P K+ I +N + + + ++ Sbjct: 299 IELPASCLDVNLTPDKTQIMLQNKEFVLHAVENVLR 334 >gi|294947342|ref|XP_002785340.1| dna mismatch repair protein mlh1, putative [Perkinsus marinus ATCC 50983] gi|239899113|gb|EER17136.1| dna mismatch repair protein mlh1, putative [Perkinsus marinus ATCC 50983] Length = 793 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 94/345 (27%), Positives = 157/345 (45%), Gaps = 25/345 (7%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQ---------- 55 L E ++N+IAAGE++ RP A+KEL+ENS+DA S+R+ G ++ Sbjct: 436 LPEAVVNRIAAGEVVARPVNAVKELLENSIDAGSTRI-----QAGCWRYRQQADDISINL 490 Query: 56 ---ITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMS 110 ++DNG G+ E++P+ +R TSK+ DD +I T GFRGEAL SI V+ LT+ + Sbjct: 491 ATAVSDNGCGIQREDLPILCKRFTTSKLRSFDDLQSIMTHGFRGEALASISHVARLTVTT 550 Query: 111 RPPQNNTGAQI-AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLI 168 + G + + GE + +P A PGT + DLF+ +P R + ++ E I Sbjct: 551 MTEDSQVGYRCEYMDGEAVDEAQPTAATPGTTIHFTDLFYNLPTRRRSLMNTQSEEYARI 610 Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS 228 D++ R A Y ++FT + ++ G S + V + Sbjct: 611 VDLVSRFAAEYYTIAFTCRNARHGSADISS-PVRGFLTHGNSAAYYRGSQRHTVYSGGEL 669 Query: 229 NEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYP-VVVLL 287 +++ + + + +FINGR V+ + I Y+ +P G+ P V L Sbjct: 670 IIHSVRPTSSVTSLG-STGGWCTIFINGRLVECAPLRKAIGDIYSRYLPKGQKPGAVHLS 728 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 + VDVNVHP K + + + + + + S Sbjct: 729 FNLPGECVDVNVHPTKKDVTISHMESLIEGLQTLLDATLKGHHYS 773 >gi|156229812|gb|AAI52496.1| Zp3a.2 protein [Danio rerio] Length = 817 Score = 252 bits (643), Expect = 2e-64, Method: Composition-based stats. Identities = 94/415 (22%), Positives = 185/415 (44%), Gaps = 30/415 (7%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L + + + + ++I +KELIENSLDA SS +E + G ++ DNG G+ Sbjct: 2 KALPPETVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + ++ + +H TSKI +D + T+GFRGEAL SI A+S + + ++ ++ Q Sbjct: 62 KATDVSVMAVKHYTSKISCHEDLEQLETYGFRGEALASICAISEVIITTKTADDDFSIQY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 ++ +I S +P + GT V +LF +P R + K + E + +++ A+ Sbjct: 122 SVDHNGQIVSQKPSHLGQGTTVCAANLFKNLPVRRQYYSNTKKCKDELKRVQNLLMAYAV 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE--LNEKSNEITLQG 235 P++ T S K+ ++ +S + + V+G + N + +++ EIT+ G Sbjct: 182 IKPELRVTLSHNKAVVWQ---KSRVSDHRTALMAVLGAASVANMLPIQHHQEQPEITIDG 238 Query: 236 YTGIP-----TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG-----RYPVVV 285 + P + + ++ ++F+N R V K IL I+ Y RYP + Sbjct: 239 FFPKPGSDLNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQSNSESVSRRYPTFM 298 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI---------IQSIQKAINKKGISTSSV 336 + + I VDVN+ P K+ + +N + + + ++ + G + Sbjct: 299 MNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLYGYSNGEENLKTAGNPSDVT 358 Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + + + LP+ ++S Q+ N +T+ S+D + Sbjct: 359 SLDEPKRTSPDISLKHPELPEDSSSNAEKQDGELSLSNTANTSSSSISEDWVINR 413 >gi|58476376|gb|AAH89718.1| pms1-prov protein [Xenopus (Silurana) tropicalis] Length = 928 Score = 252 bits (643), Expect = 2e-64, Method: Composition-based stats. Identities = 88/370 (23%), Positives = 171/370 (46%), Gaps = 19/370 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K+ L I +++ ++I +KEL+EN+LDA ++ +E + G ++ DNG Sbjct: 7 KMHCLPSATIRLLSSSQVITSVVSVVKELVENALDANATSIEIKLENFGFDKIEVRDNGK 66 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ S++ P+ +H TSKI DD + T+GFRGEAL SI +V+ + + ++ +++ Sbjct: 67 GIKSDDTPVMGVKHYTSKINSHDDLETLETYGFRGEALASICSVAEVHIATKTLEDDFSK 126 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRM 175 + + S +P + GT V V LF +P R + K + E I +++ Sbjct: 127 LYILDSSGHVVSQKPSHLGQGTTVSVHKLFKNLPVRKQYYSTIKKCKEEIRNIQELLMAY 186 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE--KSNEITL 233 I P + F+ K+ ++ +S + V+G +N V + + +I + Sbjct: 187 GIVTPNLRILFTNNKALVWQ---KSKTSDHKMAFMSVVGSAIMNCMVPIQYQSEDPKIFI 243 Query: 234 QGYTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR---YPVVV 285 GY P + ++ + ++FIN R + K IL +R + +++ G YPV Sbjct: 244 NGYLPKPYADNTTTSLSSSEKSFLFINRRPIYHKEILKMVRWYHNQSLNKGTPRCYPVFF 303 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF 345 + +E+ +DVN+ P K+ I +N + + + ++ I + + + Sbjct: 304 MNIELPASCLDVNLTPDKTQIMLQNKEFVLHAVENVLRSVYPDSQILETHKDAMPEDTVT 363 Query: 346 HQDNAPKTHL 355 + + THL Sbjct: 364 NNTDNSNTHL 373 >gi|268576302|ref|XP_002643131.1| C. briggsae CBR-MLH-1 protein [Caenorhabditis briggsae] Length = 765 Score = 251 bits (642), Expect = 2e-64, Method: Composition-based stats. Identities = 95/316 (30%), Positives = 157/316 (49%), Gaps = 20/316 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L E ++N++AAGE++ RP AIKEL+ENSLDA ++ ++ ++ GG Q++DNG G Sbjct: 8 IQRLPEDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIKVMMQNGGLKTLQVSDNGKG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+ + +R TSK+ +D ++ T+GFRGEAL S+ V+ + ++S+ Q Sbjct: 68 IEREDFELVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRADAKCAYQ 127 Query: 121 IAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 K ++ +P A GT + DLF+ +P R N + + E ++ D + R AI Sbjct: 128 GNFLDGKLLAPTKPAAGKNGTCITATDLFYNLPTRRNKMTTHGEEAKMVYDTLLRFAIHR 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYT 237 P VSF +S+ ++ +GNF + + + + ++ SN G Sbjct: 188 PDVSFALHQNQSSDFRTK---GDGNFRDVVCN-FPSKILQTVIPISLDSNRLKFKFTGKI 243 Query: 238 GIPTFNRGNANQFYV---------FINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL 288 P + + N FINGR+V+ + I + L L Sbjct: 244 SKPIASATSKNAQNRKTSRSFFSVFINGRSVRCDILKHPIDDVLQNRSLCVQ--FCALHL 301 Query: 289 EIDPRQVDVNVHPAKS 304 EID ++DVNVHP KS Sbjct: 302 EIDETRIDVNVHPTKS 317 >gi|108742137|gb|AAI17598.1| Unknown (protein for IMAGE:7223102) [Danio rerio] Length = 651 Score = 251 bits (642), Expect = 2e-64, Method: Composition-based stats. Identities = 94/414 (22%), Positives = 184/414 (44%), Gaps = 30/414 (7%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L + + + + ++I +KELIENSLDA SS +E + G ++ DNG G+ Sbjct: 2 KALPPETVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 ++ + +H TSKI +D + T+GFRGEAL SI A+S + + ++ ++ Q Sbjct: 62 KDTDVSVMAVKHYTSKISCHEDLEQLETYGFRGEALASICAISEVIITTKTVDDDFSIQY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 ++ +I S +P + GT V +LF +P R + K + E + +++ A+ Sbjct: 122 SVDHNGQIVSQKPSHLGQGTTVCAANLFKNLPVRRQYYSNTKKCKDELKRVQNLLMAYAV 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE--LNEKSNEITLQG 235 P++ T S K+ ++ +S + + V+G + N + +++ EIT++G Sbjct: 182 IKPELRVTLSHNKAVVWQ---KSRVSDHRTALMAVLGAASVANMLPVQHHQEQPEITIEG 238 Query: 236 YTGIP-----TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG-----RYPVVV 285 + P + + ++ ++F+N R V K IL I+ Y RYP + Sbjct: 239 FFPKPGSDLNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQSNSESVSRRYPTFM 298 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI---------IQSIQKAINKKGISTSSV 336 + + I VDVN+ P K+ + +N + + + ++ + G Sbjct: 299 MNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLYGYSNGEENLKTAGNHPDVT 358 Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + + + LP+ ++S Q+ N +T+ S+D + Sbjct: 359 SLNEPERTSPDISLKNPELPEDSSSNAEKQDGELSLSNTANTSSSSISEDWVIN 412 >gi|46110094|ref|XP_382105.1| hypothetical protein FG01929.1 [Gibberella zeae PH-1] Length = 1003 Score = 251 bits (642), Expect = 2e-64, Method: Composition-based stats. Identities = 89/419 (21%), Positives = 169/419 (40%), Gaps = 33/419 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+++ + ++QI +G++I +KEL+ENS+D+ ++ ++ G ++ DNG Sbjct: 3 TIKQIDGRTVHQIQSGQVIVDLCSVVKELVENSVDSGATSIDVRFKNQGLDLIEVADNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G+ + P +H TSK+S D + + TFGFRGEAL S+ A+S +++ + G Sbjct: 63 GIAPDNYPSVALKHHTSKLSSYSDIATLETFGFRGEALASLCALSTVSITTCQQGEVPKG 122 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++++ K+S VA + GT V V LF +P R ++ + E N + ++ + A Sbjct: 123 SKLSFEPSGKLSGTAVVAASKGTTVSVERLFHNLPVRRRELERNIKREWNKVIALLGQYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKSNE---- 230 + F+ S S ++ ST GN E I + G + V L Sbjct: 183 CIQTNMKFSVSQQPSKGKRIQMFSTKGNPTTRENIINIFGAKTMTVLVPLELCLEMQPST 242 Query: 231 -----------------ITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTA 271 + + G+ P+ R ++ F+NGR Sbjct: 243 VSPALRVGSDNDSTSKEVRVVGHVSRPSHGDGRQTPDRQMFFVNGRPCGLPQFAKAFNEV 302 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 Y + P ++ +++D DVNV P K I + + + + ++ + + Sbjct: 303 YKSYNNT-QTPFILADIQLDTHMYDVNVSPDKRSILLHDQNQLLDNLRAALTDLFDSQDY 361 Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 + S + P + P +T + +R S ++ D P Sbjct: 362 QVPTSQLMPFKS--RTETTPSANTPFKPPHVTPKKAPDNSHSHRGSDDEASNEDTPPSR 418 Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 14/172 (8%) Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 D L I+DQHA E+ FE++++ + SQ L+ P+ ++L E +I+++ + Sbjct: 806 DNDELFIIDQHATDEKYNFERLQEV---QTVQSQRLVHPKRLELTALEEEIILQNIPAIE 862 Query: 482 RLGIKA-------ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY---TLQD 531 G K E G + +P ++I + + S+ Sbjct: 863 ANGFKVHVDMSGDEPVGSRC-EVLALPMSREVTFSLADFEELIALLGEESSESKHIPRPS 921 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ + A+ AC S+ G+ + +M L+R M + C HGRPT L Sbjct: 922 KVRKMFASRACRSSVMIGKALTHGQMETLVRHMAELDKPWNCPHGRPTMRHL 973 >gi|302655606|ref|XP_003019589.1| hypothetical protein TRV_06385 [Trichophyton verrucosum HKI 0517] gi|291183322|gb|EFE38944.1| hypothetical protein TRV_06385 [Trichophyton verrucosum HKI 0517] Length = 1103 Score = 251 bits (642), Expect = 2e-64, Method: Composition-based stats. Identities = 98/425 (23%), Positives = 170/425 (40%), Gaps = 30/425 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I +KEL+ENSLDA ++ ++ G ++ DNG Sbjct: 49 TIKPIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSIDVRFKNNGLDLIEVQDNGH 108 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ +H TSK+S D +++ TFGFRGEAL S+ AVS+LT+++ Q A Sbjct: 109 GISPNNYESLALKHYTSKLSTFADLTSLQTFGFRGEALSSLCAVSNLTVVTAEAQQAPRA 168 Query: 120 Q--IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 K+ S + VA GT V + +LF +P R K+ + E + ++ A Sbjct: 169 SKLDFEFSGKLKSTQVVAGQKGTTVSIENLFKPLPVRRRELEKNVKREYGKVIALLHAYA 228 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVE----------- 223 V F + +T N E IS V G + + Sbjct: 229 CISTGVRFNVKNQMPKGKSVVVFTTKSNPTTRENISNVYGTKTLLALMPLDLDLEYEPST 288 Query: 224 -----LNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 ++ SN+I + G+ P F R ++ F+N R I Y Sbjct: 289 AAKRFSSQASNKIFVHGHISKPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYKSF- 347 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 L + P + E+D DVNV P K I + + + + ++ + + Sbjct: 348 NLSQSPFIFANFEMDTSAYDVNVSPDKQTILLHDAGALIESL----KASLTELFENEDQT 403 Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 + ++ Q S+ TQ+K + L DD + +P Sbjct: 404 VPVSQLTFSKQSQLTPNRGQTPPASVGATQDKPEEPPGNAMYSQELGQDDTVEENNPEPT 463 Query: 397 EESEA 401 + S++ Sbjct: 464 QTSQS 468 Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 79/206 (38%), Gaps = 45/206 (21%) Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 Q D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I+++ Sbjct: 860 AEQEQDELFIIDQHASDEKYNFERLQ---AETTVQNQRLVKPKTLDLTAVEEEVIIDNLA 916 Query: 479 DLHRLGIKAE-------RFGPNAIAIREIP----AILSKKNIPQLL-------------- 513 L + G E G I +P + +++ +L+ Sbjct: 917 ALEKNGFIVEIDTSGDEPIGRRCKLI-SLPLSKEVVFDTRDLEELIVLLSEAPQQSQNNL 975 Query: 514 ----RDIIDEIIDSSTTY------------TLQDRIENILATMACYGSIRSGRKMQSIEM 557 RD +D + + ++ + A AC SI G+ + +M Sbjct: 976 GKRARDELDSDAEHTEPPGVASSPFSDYLVPRPSKVRKMFAMRACRSSIMIGKNLTHRQM 1035 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKL 583 +++ M C HGRPT L Sbjct: 1036 ETVVKHMGTIDKPWNCPHGRPTMRHL 1061 >gi|45184731|ref|NP_982449.1| AAL093Cp [Ashbya gossypii ATCC 10895] gi|44980077|gb|AAS50273.1| AAL093Cp [Ashbya gossypii ATCC 10895] Length = 734 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 131/711 (18%), Positives = 251/711 (35%), Gaps = 134/711 (18%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + ++ + I A++EL++NS+DA R+E + + + D+G Sbjct: 8 KIHRLEESVFLRLRSQLSIVSVGAAVRELMQNSVDACCGRLEVSVDLD-RWRVHVRDDGE 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+ Q H TSK+ +D + T+GFRGE L + +S + L+S+ A Sbjct: 67 GLNREELAKVGQWHYTSKLRRLEDLTATDTYGFRGEGLYMLSNISRVILLSKRAGMKHAA 126 Query: 120 QIAISGEKISSVRPV------AMNPGTIVEVRDLFFTIPARLNFLKS--EQVETNLITDV 171 + + R GT V + DLF+ +P R L + I Sbjct: 127 LHRLPATDNALPRDSDDIRLLDGAHGTTVILEDLFYNLPIRRRMLARTPPHRLYDEIRAD 186 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYK-------MNFQSTNGNFPERISQVIGEDFINNAV-E 223 + ++ + + + IK+N+ K + + + +G + Sbjct: 187 VLQLLLFCQTLQVSVLVIKNNQEKQIVRSGNLTQLTFPDTLMAVLMCCLGPVVAAKDLQY 246 Query: 224 LNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKF----ILSTIRTAYA------ 273 ++ K +I +QG T + + +++IN R +DK R+A Sbjct: 247 VSAKYQDIEVQGVIS--TVGVPSKDYQFIYINKRRYEDKRFIFGFNKLFRSARYKEDNML 304 Query: 274 ------ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 YPV +L+ + P D+ +P+K +++ + Q + + Sbjct: 305 AASTRGGQQAYSGYPVYLLVCKGPPSISDLLQNPSKVIENLEYGRVLQPLLCQVAKSFLR 364 Query: 328 KKGISTSSVLSKKM---------------------------------------ISSFHQD 348 G +T S L +KM I+ +Q Sbjct: 365 HYGHATVSFLDRKMTRNRLRAELPLPIQGKTDQDAPESSLHSGTDARHLLNGGINPVNQH 424 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQ--------------ENRLSTNDLLPSDDPTYSEDND 394 K + P A+ ++ L+ + S +S+++ Sbjct: 425 PKRKKYNPPVASMNSSADATKILEHVAKIRTRNINVGLPVQKPVGSGSISSSLAFSDEHL 484 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDG----LVIVDQHAAHERLIFEKMRQDFNST 450 V+ + + + + L+I+DQHAA ER+ E +D+ T Sbjct: 485 SVDSIQLKDCIVINQIGNKFILLKLEPSRSRTTPLLLILDQHAADERVKLEAYTRDYLFT 544 Query: 451 KITSQTLL----TPEIIDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPA 502 +T+Q +DL E +++ + ++ G + E GP + ++ IP Sbjct: 545 LLTAQPSFYTTPCSIAMDLTHTEADILLHYKREIEFWGFEICYKDEYTGP--LYLKAIPT 602 Query: 503 IL---SKKNIPQLLRDIID---------------------------EIIDSSTTYTLQDR 532 + K ++ L R ++ E + Sbjct: 603 LFDAKKKNDVHYLKRALLQYAYDLKSLKKTKITSIEADGYVTKHLNEFAWWKYMNAIPTV 662 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 IL + AC +I G K+ E L+R++ +C HGRP+ I + Sbjct: 663 FLEILNSKACRSAIMFGDKLNHDECLFLVRQLSTCNMPLRCAHGRPSVIPI 713 >gi|114612035|ref|XP_001141671.1| PREDICTED: mismatch repair endonuclease PMS2 isoform 2 [Pan troglodytes] Length = 862 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 86/352 (24%), Positives = 151/352 (42%), Gaps = 27/352 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF T+P R F ++ + E + V+ I Sbjct: 135 LMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCII 194 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNE---------- 226 + + + + T G + E I V G+ + + + + Sbjct: 195 SAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEE 254 Query: 227 --------KSNEITLQGYTGIP--TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ R + ++ + FIN R + + Y Sbjct: 255 YGLSCSDALHNLFYISGFISQCARGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMY- 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 +YP VVL + +D VD+NV P K I + ++ + S+ + Sbjct: 314 NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDS 365 Score = 150 bits (379), Expect = 5e-34, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 133/354 (37%), Gaps = 20/354 (5%) Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD- 296 G ++ A+ + V + +++ + P+ + Sbjct: 512 GSHCSSKCVASTPGDRGSQEHVDSQEKAPETDDCFSDVDCHSNQEDTGCKFRVLPQPTNL 571 Query: 297 --VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 N K + I ++ + + ++ ++ K+ + + Sbjct: 572 ATPNTKRFKKEEILSSSD-ICQKLVNTQDVSASQVDVAV------KINKKVVPLDFSMSS 624 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 L K L + ++ ++N + + +E ++ +E T + Q + Sbjct: 625 LAKRIKQLHHEAQQSEGEQNYRKFRAKICPGENQAAE-DELRKEISKTMFAEMEIIGQFN 683 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +II++ + + IVDQHA E+ FE ++Q T + Q L+ P+ ++L A+++ Sbjct: 684 LGFIITKLNEDIFIVDQHATDEKYNFEMLQQH---TVLQGQRLIAPQTLNLTAVNEAVLI 740 Query: 475 EHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 E+ E + G A I +P + PQ + ++I + DS Sbjct: 741 ENLEIFRKNGFDFVIDENAPVTERAKLI-SLPTSKNWTFGPQDVDELIFMLSDSPGVMCR 799 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R++ + A+ AC S+ G + + EM +L+ M + + C HGRPT + Sbjct: 800 PSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHI 853 >gi|259155136|ref|NP_001158811.1| mismatch repair endonuclease PMS2 [Salmo salar] gi|223647526|gb|ACN10521.1| PMS1 protein homolog 2 [Salmo salar] Length = 726 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 86/413 (20%), Positives = 166/413 (40%), Gaps = 34/413 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G+++ + A+KEL+ENS+DA ++ V+ + G +++DNG Sbjct: 40 TIKAIDRQSVHQICSGQVVLTLATAVKELVENSIDAGATNVDIKLKDSGTELVEVSDNGK 99 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +H TSK+ D D ++ TFGFRGEAL S+ A+S L++++ G Sbjct: 100 GVEEANFEGLTLKHHTSKLKDFSDLIHVETFGFRGEALSSLCALSDLSVVTCHEAAQVGT 159 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 ++ ++ P GT V + LF+T+P R F ++ + E + V++ I Sbjct: 160 KLVFDHNGHLTQRLPHPRQQGTTVSLSQLFYTLPVRHKEFQRNIKKEYTKMIHVLQSYCI 219 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE----- 230 V T + + R + S + + I + G + + + + S Sbjct: 220 VSTGVRITCTNQTGQGKRTPVLCTSGRQSMRDNIGAIFGPKQLQSLLLFQQLSPTDNIKE 279 Query: 231 -------------ITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAET 275 T+ G+ G + ++ + +IN R + + Y Sbjct: 280 DYGLSNADLPKDLFTISGFVSRGDHGVGRSATDRQFFYINNRPCDPSKVSKVVNEVYHTF 339 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI-------IQSIQKAINK 328 +YP V L + + VDVNV P K I + ++ + ++ I+ Sbjct: 340 -NRHQYPFVALNITVASECVDVNVTPDKRQIFLQEEKLLLAILKSSLIAMYETGVNKISL 398 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 +S S+ + S+ P S E E+ + + Sbjct: 399 NHMSFSTTSKHTLQGSYRPAEPPSDMEGCQVPSSETAPEAGDDSESVIPSPQS 451 >gi|119481545|ref|XP_001260801.1| DNA mismatch repair protein (Pms1), putative [Neosartorya fischeri NRRL 181] gi|119408955|gb|EAW18904.1| DNA mismatch repair protein (Pms1), putative [Neosartorya fischeri NRRL 181] Length = 1046 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 92/418 (22%), Positives = 171/418 (40%), Gaps = 33/418 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I +KEL+ENSLDA ++ +E G ++ DNG Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSIEVRFKNNGLDSIEVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G++ E +H TSK+S +D S +HTFGFRGEAL S+ A++ +++ Sbjct: 63 GISPENYENVALKHYTSKLSSYEDLSRLHTFGFRGEALSSLCALADFRIVTAQANQAPKA 122 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ K+S + VA GT V LF +P R K+ + E + +++ A Sbjct: 123 TRLEFETSGKLSKTQIVAGQKGTTASVEGLFKKLPVRRRELEKNIKREYGKVLNLLHAYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNF--PERISQVIGEDFINNAVE----------- 223 V F+ + STNGN E I+ V G + + Sbjct: 183 CISTGVRFSVRNTVGKNRNVVVFSTNGNQTTKENIANVYGAKTLLALIPLDLALEFKPSA 242 Query: 224 -----LNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 + + I ++G+ P F R ++ F+N R I Y Sbjct: 243 AGRRTAEGELHTIQVKGHISRPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYKSF- 301 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 + + P V +D DVNV P K I + + + + ++++ + +T Sbjct: 302 NVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIDSL----KQSLTEMFEATDQT 357 Query: 337 LSKKMISSFHQDNAPK---THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + + I + Q + T +++ +E + +++ + +D S+ Sbjct: 358 VPQSQIPGYKQPGTKQQLGTLQAVTPRRVSSEKEAITGEQDHPADDDEDTESSHLSSQ 415 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 101/257 (39%), Gaps = 32/257 (12%) Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 L + + Q L + + + + T + + + Q Sbjct: 735 SLSRIEGQMKKVQHSLRSYRSNVDYSQEDTAAAMTVTAEERLSLTVTKDDFARMRIIGQF 794 Query: 414 HQNYIISQT---------TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 + +I++ D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +D Sbjct: 795 NLGFILATRSSEDGSADSKDELFIIDQHASDEKFNFERLQ---AETVVQNQRLVQPKRLD 851 Query: 465 LLEGECALIMEHDEDLHRLGIKAE-------RFGPNAIAIREIP----AILSKKNIPQLL 513 L E +++E+ L + G E G I +P + +++ +L+ Sbjct: 852 LTAVEEEIVIENRTALEKNGFVVEVDDSGNEPIGQRCKLI-SLPLSKEVVFGVRDLEELI 910 Query: 514 RDIIDEIIDSSTTYT-------LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 ++ E+ +S++ + ++ + A AC SI G+ + +M R++R M Sbjct: 911 V-LLSEMPATSSSGSAMQTHIPRPSKVRKMFAMRACRSSIMIGKSLTQTQMVRVVRNMGT 969 Query: 567 NPNSSQCNHGRPTFIKL 583 C HGRPT L Sbjct: 970 IDKPWNCPHGRPTMRHL 986 >gi|284520128|ref|NP_001136373.2| PMS1 postmeiotic segregation increased 1 [Xenopus (Silurana) tropicalis] Length = 921 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 87/368 (23%), Positives = 169/368 (45%), Gaps = 19/368 (5%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 L I +++ ++I +KEL+EN+LDA ++ +E + G ++ DNG G+ Sbjct: 2 HCLPSATIRLLSSSQVITSVVSVVKELVENALDANATSIEIKLENFGFDKIEVRDNGKGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 S++ P+ +H TSKI DD + T+GFRGEAL SI +V+ + + ++ +++ Sbjct: 62 KSDDTPVMGVKHYTSKINSHDDLETLETYGFRGEALASICSVAEVHIATKTLEDDFSKLY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + + S +P + GT V V LF +P R + K + E I +++ I Sbjct: 122 ILDSSGHVVSQKPSHLGQGTTVSVHKLFKNLPVRKQYYSTIKKCKEEIRNIQELLMAYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE--KSNEITLQG 235 P + F+ K+ ++ +S + V+G +N V + + +I + G Sbjct: 182 VTPNLRILFTNNKALVWQ---KSKTSDHKMAFMSVVGSAIMNCMVPIQYQSEDPKIFING 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR---YPVVVLL 287 Y P + ++ + ++FIN R + K IL +R + +++ G YPV + Sbjct: 239 YLPKPYADNTTTSLSSSEKSFLFINRRPIYHKEILKMVRWYHNQSLNKGTPRCYPVFFMN 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 +E+ +DVN+ P K+ I +N + + + ++ I + + + + Sbjct: 299 IELPASCLDVNLTPDKTQIMLQNKEFVLHAVENVLRSVYPDSQILETHKDAMPEDTVTNN 358 Query: 348 DNAPKTHL 355 + THL Sbjct: 359 TDNSNTHL 366 >gi|291534087|emb|CBL07200.1| DNA mismatch repair enzyme (predicted ATPase) [Megamonas hypermegale ART12/1] Length = 495 Score = 251 bits (640), Expect = 3e-64, Method: Composition-based stats. Identities = 116/494 (23%), Positives = 205/494 (41%), Gaps = 60/494 (12%) Query: 155 LNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIG 214 FLK+ E N I D I ++A++ P ++F NG+ + I + G Sbjct: 6 KKFLKTTTTEANKINDFIIKLALSKPNIAFKLINNNKIAIT---TPGNGSLYDAIECIYG 62 Query: 215 EDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAE 274 + + +++I + G+ P R + + INGR V + I I AY Sbjct: 63 TKVSEELLPIEAITDDIKVTGFISKPAIIRSSRSWQTFVINGRVVNSRIISKAIDNAYHS 122 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 +P YP V+L +E++ R +D+NVHP K+ I+F + +++ I ++ +A+ Sbjct: 123 LLPKSGYPFVILNIEVNKRTIDINVHPQKAEIKFEDESLLFKTIYHAVLEAVKPNDNQAL 182 Query: 335 SVLSKKMISSFH--QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 S + + + P+ + ++ +T F Q + + L + P+ ++ Sbjct: 183 SDFAIPVTDKALHIEKTVPEQINMDLSENMPSTSANSFKQNSINHISSLKNNTTPSTTDL 242 Query: 393 NDPVEESEATHYQ----------------------------------------------- 405 N + E H Sbjct: 243 NKFRQARETLHPNLSNYHNNTVKETAVQNYQADTTTNPQTDINISSKENLTDCQNSTQLL 302 Query: 406 ----LGIACAQIHQNYIISQ-TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 QI +I++Q G+ I+DQHAAHER++++K + +I Q LL Sbjct: 303 KEAVNLTPIGQIDDCFIVAQGPNGGMYIIDQHAAHERILYDKF--AKQTERIPVQPLLMH 360 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 +D+ E LI E+ + L+ LG E G N I ++E+PA + + + R+I+ + Sbjct: 361 LFLDVNNSELTLIEENQQILYDLGFNVELAGQNQIRLKEVPADIKPQESEDIFREILISL 420 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 T T Q+ + LA AC +I++G + +M +L E+ + C HGRPT Sbjct: 421 SQL-HTPTPQEIRHSCLAMTACKAAIKAGDVLNITQMKIILNELAQTTLPYTCPHGRPTI 479 Query: 581 IKLKLSDIEKLFGR 594 IK D+EK+F R Sbjct: 480 IKFSTYDLEKMFKR 493 >gi|301604746|ref|XP_002932025.1| PREDICTED: mismatch repair endonuclease PMS2-like [Xenopus (Silurana) tropicalis] Length = 848 Score = 250 bits (639), Expect = 4e-64, Method: Composition-based stats. Identities = 81/331 (24%), Positives = 145/331 (43%), Gaps = 28/331 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ + A+KEL+ENS+DA ++ ++ + G +++DNG G Sbjct: 13 IKPIDRKSVHQICSGQVVLSLATAVKELLENSIDAGATSIDIKLKEYGAESIEVSDNGCG 72 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +H TSK+ D D ++ TFGFRGEAL S+ A+S L++++ G + Sbjct: 73 VEENNFEGLTLKHHTSKLQDFSDLISVETFGFRGEALSSLCALSDLSIVTCHKTAKVGTR 132 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI PV+ GT V ++ LF+T+P R F ++ + E + V++ I Sbjct: 133 LVYDHNGKIIQKSPVSRQQGTTVSIQQLFYTLPVRHKEFQRNLKKEFTKMVQVLQAYCII 192 Query: 179 YPKVSFTFST---IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE--------- 226 V T + + + + E I V G+ + + + + Sbjct: 193 STGVRITCTNQVGQGKRNPVVCSSGSTSDVKENIGAVFGQKQLQSLIPFVQLPPSETVCE 252 Query: 227 ---------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAET 275 + GY G + ++ + FIN R + + Y Sbjct: 253 EYGLIHEDTPHGFYNISGYISRCDHGVGRSSTDRQFFFINQRPCDPAKVSKIVNEVYH-L 311 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYI 306 +YP VVL + + VD+NV P K I Sbjct: 312 YNRHQYPFVVLNICVSSECVDINVTPDKRQI 342 Score = 155 bits (393), Expect = 2e-35, Method: Composition-based stats. Identities = 50/284 (17%), Positives = 107/284 (37%), Gaps = 15/284 (5%) Query: 316 NFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENR 375 + I + + + ++ + + + LP +LT E++ Q+ Sbjct: 565 DTIPTCKRAKVEDDALPSACTVQPDTVDAPMNIQRRTKPLPFSMANLTKGMERIKQQQRI 624 Query: 376 LSTNDLLPSDDPTYSEDNDPVEESE------ATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + ++ E E + Q + +II++ L ++ Sbjct: 625 KEETERYRRFRAKINPGDNQAAEDELRKEISKEMFAKMEIIGQFNLGFIITKLDSDLFMI 684 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 DQHA E+ FE ++ T + Q L+ P+ + L +++++ + + G Sbjct: 685 DQHATDEKYNFEMLQ---QETVLQGQRLIAPQKLHLTAVNETVLIDNLDIFKKNGFDF-I 740 Query: 490 FGPNA-----IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 F A + + +P + Q + ++I + DS R+ + A+ AC Sbjct: 741 FDEEAPITERVKLISLPTSKNWTFGQQDIEELIFMLSDSPGVMCRPSRVRQMFASRACRK 800 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 S+ G + EM +L+ M + + C HGRPT + D+ Sbjct: 801 SVMIGTALNVHEMKKLVTHMGEIEHPWNCPHGRPTMRHIANLDM 844 >gi|320032950|gb|EFW14900.1| DNA mismatch repair protein [Coccidioides posadasii str. Silveira] Length = 939 Score = 250 bits (639), Expect = 4e-64, Method: Composition-based stats. Identities = 93/430 (21%), Positives = 164/430 (38%), Gaps = 32/430 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + I+QI +G++I +KEL+ENSLDA ++ ++ G ++ DNG Sbjct: 3 TIKAIEARSIHQIQSGQVIVDLCSVVKELVENSLDAGATSIDIRFKNNGLDLIEVQDNGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G+ +H TSK+S +D S++ TFGFRGEAL S+ A+S +++ Sbjct: 63 GIPPNNYEGVALKHHTSKLSTFEDLSSLQTFGFRGEALSSLCALSDFHIVTAQANQAPKA 122 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ K+ + + VA GT+ V LF +P R K+ + E + ++ A Sbjct: 123 TRLDFEVSGKLKNTQVVAGQRGTVASVEGLFQRLPVRRRELEKNIKREYGKVLGLLHAYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVE----------- 223 V F + +T N E IS V G + + Sbjct: 183 CISTGVRFNVKNQMPKGKSVVVFATKSNPTTKENISNVYGAKTLLALIPLDLELEFEPSA 242 Query: 224 --------LNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 + + N+I + GY P F R ++ F+N R I Y Sbjct: 243 ESKTSRRQQDGQVNKIFVHGYISKPVFGEGRQTPDRQMFFVNSRPCGLPQIARAFNEVYR 302 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS-IQKAINKKGIS 332 + + P + E++ DVNV P K I + + + S + + Sbjct: 303 SF-NISQSPFIFANFEMNTNAYDVNVSPDKRTILLHDAGALIESLKASLTKLFEGQDQTV 361 Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 S L+ S+ Q + P A + +N+ E + + + D + + Sbjct: 362 PQSQLAVPRQSTMKQ--LVNKNAPSIAAAPSNSSPTTQRSEEAIGVDKEVQESDHEFDKQ 419 Query: 393 NDPVEESEAT 402 + S Sbjct: 420 RTSLSASPEP 429 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 71/182 (39%), Gaps = 13/182 (7%) Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 L Y S E+ Q++ T L +++ V + L I Sbjct: 718 SLKHYKASEEPISEEASEQQDSAETRLSLTVSKEDFAKM--RVVGQFNLGFILAIRPGTD 775 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 ++ + T D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I Sbjct: 776 STDFQDNPTKDELFIIDQHASDEKYNFERLQ---AETVVQNQRLVRPKTLDLTAVEEEVI 832 Query: 474 MEHDEDLHRLGIKA-------ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 +++ L + G E G I +P + L ++I + +S Sbjct: 833 IDNIPTLEKNGFIVDIDTSGDEPIGRRCKLI-SLPLSKEVVFNTRDLEELIVLLSESPQH 891 Query: 527 YT 528 + Sbjct: 892 HR 893 >gi|311302926|gb|ADP89037.1| MLH1-like protein 1 [Trichomonas vaginalis] Length = 779 Score = 250 bits (639), Expect = 4e-64, Method: Composition-based stats. Identities = 100/308 (32%), Positives = 154/308 (50%), Gaps = 6/308 (1%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 PS KEL+ENS+DA S R+ + GG S +I+DNG G+ + ++P+A QRH TSKI Sbjct: 4 PSNVAKELLENSIDAGSKRISIELQNGGYSLIKISDNGCGINAADMPLACQRHATSKIQS 63 Query: 83 --DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ-IAISGEKISSVRPVAMNPG 139 D N+ TFGFRGEAL S+ VSHL+++S+ +++ G G I + V + G Sbjct: 64 FNDLRNVTTFGFRGEALFSMSCVSHLSILSKTEESSFGYSGNFQDGNLIGELSTVPITIG 123 Query: 140 TIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQ 199 T V + DLF+ P +L + I +++R AIAYP++SF+ + + Sbjct: 124 TTVTISDLFYNKPTKLRTSPDSATQNRKILQIVQRYAIAYPEISFSVICDGKEKMMTHGS 183 Query: 200 STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTV 259 S++ + + + V + + T++ Y G P+ + VF+NGR V Sbjct: 184 SSHYDVISLLYGIDAR--SATFVLTGDIAKNTTVEMYLGSPSAKKQLKES-AVFVNGRLV 240 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 Q I I Y + G P +LL + P +VDVNVHP K + F N + + I Sbjct: 241 QCDHIKRAINAVYGSFLMRGEKPFAFVLLRMPPDKVDVNVHPTKKDVIFTNEQSLIDNIC 300 Query: 320 QSIQKAIN 327 I + Sbjct: 301 DIILAELK 308 >gi|14279172|gb|AAK58517.1|AF252300_2 putative DNA mismatch repair protein HexB [Streptococcus thermophilus] Length = 179 Score = 250 bits (639), Expect = 4e-64, Method: Composition-based stats. Identities = 78/177 (44%), Positives = 115/177 (64%), Gaps = 2/177 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE++ERP+ +KEL+EN++DA S+++ + G S QITDNG Sbjct: 3 KIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEESGLSKIQITDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM ++ M+++RH TSKI + D I T GFRGEALPSI ++SHLT+++ G Sbjct: 63 GMAQADVAMSLRRHATSKIKNQGDLFRIRTLGFRGEALPSIASISHLTIVTAADGEVYGT 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 ++ G +I S P++ GT + V +LF+ PARL ++KS Q E I DV+ R++ Sbjct: 123 KLVAKGGEIESQDPISTPVGTKITVENLFYNTPARLKYMKSLQAELAHIVDVVNRLS 179 >gi|311302930|gb|ADP89039.1| MLH1-like protein 1 [Trichomonas vaginalis] Length = 779 Score = 250 bits (639), Expect = 5e-64, Method: Composition-based stats. Identities = 100/308 (32%), Positives = 154/308 (50%), Gaps = 6/308 (1%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 PS KEL+ENS+DA S R+ + GG S +I+DNG G+ + ++P+A QRH TSKI Sbjct: 4 PSNVAKELLENSIDAGSKRISIELQNGGYSLIKISDNGCGINAADMPLACQRHATSKIQS 63 Query: 83 --DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ-IAISGEKISSVRPVAMNPG 139 D N+ TFGFRGEAL S+ VSHL+++S+ +++ G G I + V + G Sbjct: 64 FNDLRNVTTFGFRGEALFSMSCVSHLSILSKTEESSFGYSGNFQDGNLIGELSTVPITIG 123 Query: 140 TIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQ 199 T V + DLF+ P +L + I +++R AIAYP++SF+ + + Sbjct: 124 TTVTISDLFYNKPTKLRTSPDSATQNRKILQIVQRYAIAYPEISFSVICDGKEKMMTHGS 183 Query: 200 STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTV 259 S++ + + + V + + T++ Y G P+ + VF+NGR V Sbjct: 184 SSHYDVISLLYGIDAR--SATFVLTGDIAKNTTVEMYLGSPSAKKQLKES-AVFVNGRLV 240 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 Q I I Y + G P +LL + P +VDVNVHP K + F N + + I Sbjct: 241 QCDHIKRAINAVYGSFLMRGEKPFAFVLLRMPPDKVDVNVHPTKKDVIFTNEQSLIDNIC 300 Query: 320 QSIQKAIN 327 I + Sbjct: 301 DIILAELK 308 >gi|149408994|ref|XP_001512507.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus] Length = 879 Score = 250 bits (638), Expect = 5e-64, Method: Composition-based stats. Identities = 87/352 (24%), Positives = 153/352 (43%), Gaps = 27/352 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ A+KEL+ENS+DA ++ ++ + G +++DNG G Sbjct: 17 IKPIDRKSVHQICSGQVVLNLGTAVKELVENSVDAGATNIDLKLKEYGADLIEVSDNGCG 76 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI D D +++ TFGFRGEAL S+ A+S +T+ + G + Sbjct: 77 VEEENFAGLTLKHYTSKIQDFSDLTHVETFGFRGEALSSLCALSDVTINTCHKSAKVGTR 136 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + I+ P GT V V+ LF+T+P R F ++ + E + V++ I Sbjct: 137 LVFDHNGTITQKVPFPRQQGTTVIVQQLFYTLPVRHKEFQRNIKKEFAKMVQVLQAYCII 196 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNE---------- 226 + + + TNGN E I V G+ + + + + Sbjct: 197 SAGIRINCTNQVGQGKRQPVVCTNGNSTVKENIGAVFGQKQLQSLISFVQLPPSESVCEE 256 Query: 227 --------KSNEITLQGYTGIPTFNRGNAN--QFYVFINGRTVQDKFILSTIRTAYAETI 276 N T+ G+ G + + + FIN R + + Y Sbjct: 257 YGLKFSDAPHNFYTITGFISRCDHGVGRSTTERQFYFINQRPCDPAKVSRLVNEVYHTY- 315 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 +YP VVL + +D VD+NV P K I + ++ + S+ + Sbjct: 316 NRHQYPFVVLNISVDSECVDINVTPDKRQILLQKEKLLLAVLKTSLLGMFDS 367 Score = 154 bits (388), Expect = 6e-35, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 113/297 (38%), Gaps = 13/297 (4%) Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 NV AKS + + + + ++ + V K + F + K Sbjct: 588 TPNVKRAKSEKKVALSSEVPSKFTSDQNNTLSSQVDVAIKVNKKMVPVEFSMNALAK--- 644 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 + +EK + S + +++ +E + Q + Sbjct: 645 ---RIKQLHREEKNRARAQNYRRFRAKISPGENQAAEDELRKEISKEMFTQMEIIGQFNL 701 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 +II++ L I+DQHA E+ FE ++ Q L+ P+ ++L A+++E Sbjct: 702 GFIITKLNADLFIIDQHATDEKYNFEMLQLHSVPQG---QRLIVPQNLNLTAVNEAILIE 758 Query: 476 HDEDLHRLGIK--AERFGP--NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 + E + G + P + + +P + PQ + ++I + D Sbjct: 759 NLEIFKKNGFDFIIDEKAPVTERVKLISLPTSKNWTFGPQDIDEMIFMLSDCPGVMCRPS 818 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 R+ + A+ AC S+ G + +IEM +L+ M + + C HGRPT + D+ Sbjct: 819 RVRQMFASRACRKSVMIGTALNTIEMKKLITHMSEIEHPWNCPHGRPTMRHIASLDM 875 >gi|294657454|ref|XP_459762.2| DEHA2E10472p [Debaryomyces hansenii CBS767] gi|199432704|emb|CAG88001.2| DEHA2E10472p [Debaryomyces hansenii] Length = 726 Score = 250 bits (638), Expect = 5e-64, Method: Composition-based stats. Identities = 138/716 (19%), Positives = 248/716 (34%), Gaps = 137/716 (19%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I KL E +++ + + I AI+EL++NSLDA ++ V + S + D+G Sbjct: 10 SIHKLPESVLSCLQSQITISSFQAAIRELLQNSLDANANEVIIKLDFRSLSVC-VEDDGR 68 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ----- 114 GM EE+ +R+ TSKI + +I TFGFRGEAL SIG +S L+++S+ Sbjct: 69 GMRPEELEKVGKRYFTSKIDSLESLKDIETFGFRGEALHSIGCISRLSIISKHTSNSQVF 128 Query: 115 ------NNTGAQIAISGEKISSVRPVA------MNPGTIVEVRDLFFTIPARLNFLKSE- 161 A I E+IS+ GTIV LF +P R + + Sbjct: 129 KLKEIKQEQSACIYKFEEEISNYLENHFKFDPISQSGTIVTATSLFANVPVRRSQILKIP 188 Query: 162 -QVETNLITDVIRRMAIAYPKVSFT----FSTIKSNRYKMNFQSTNGN-----FPERISQ 211 + VI + I P V T ST + + + ++ + + Sbjct: 189 EHKLMEDVRQVILQSLIGRPNVKLTLIKLDSTSGDFQKTIYVERSHESELQARYATIFKS 248 Query: 212 VIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRT-----VQDKFILS 266 + G ++ + + L G G+ F + Y+F+N R K++ Sbjct: 249 IYGHSLLSEYETVRANFQDYKLDGIIGL--FPSQSKAFQYIFVNQRPLLISNEDSKYLNK 306 Query: 267 TIRTAYAETI------------------------PLGRYPVVVLLLEIDPRQVDVNVHPA 302 TA + R+PV ++ ++ D+ P+ Sbjct: 307 IFVTANFGGMLTSTASNISLSPSKVSPNKQYTSKSFSRFPVFIINIQCPIIIEDLFQDPS 366 Query: 303 KSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSL 362 KS + +I N + ++ +G + S K+ P ++ Sbjct: 367 KSIYYSNHMKLILNMLRNVFSSFLSAQGYECVTRDPSVSPSPSPSPKRQKSERPPLKQNI 426 Query: 363 T------------------------NTQEKLFLQENRLSTNDLLPSDDPTYSED------ 392 + +T + F Q T ++ S Sbjct: 427 SFIPVLKPSLKRETLKSTIDFIDGNHTPKFPFNQLASTDTQRFSANEFNLQSICYTGNNK 486 Query: 393 -----------NDPVEESEATHYQLGIACAQIHQNYII----------SQTTDGLVIVDQ 431 + + + +Q+ + +I+ S + +++VDQ Sbjct: 487 SMNANARDLDLQETIIDKNDLIDGNYRIISQVDRKFILLVMPASNSVSSTKSPTILVVDQ 546 Query: 432 HAAHERLIFEKMRQDFNSTKITSQ---TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 HA ER+ E + +DF + L P + E L + + LGI Sbjct: 547 HACDERIRVEALFKDFILMLLDKTLGIELNKPLTFTASDREKNLFNSYGSNFESLGINYA 606 Query: 489 RFGPNAIAIREIPAILSKK---NIPQLLRDIIDEIIDSS------------------TTY 527 + + + +P IL +K +I L ++ + D Sbjct: 607 TNAEHKLIVTHLPHILIEKVGTDIDFLKSCLLQHLFDLEYHKKKVNISNLATEGWFQNVV 666 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 L I + + + AC +I G K+ EM L++ + + QC HGRP+ + L Sbjct: 667 QLPQVIIDCINSKACRSAIMFGDKLTVEEMMYLIKSLSECNQPFQCAHGRPSIVPL 722 >gi|114585966|ref|XP_001170412.1| PREDICTED: MutL protein homolog 1 isoform 7 [Pan troglodytes] Length = 687 Score = 250 bits (638), Expect = 5e-64, Method: Composition-based stats. Identities = 76/220 (34%), Positives = 120/220 (54%), Gaps = 4/220 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 128 ASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHN 187 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFIN 219 +SF+ + + I + G Sbjct: 188 AGISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSR 226 Score = 38.1 bits (87), Expect = 4.7, Method: Composition-based stats. Identities = 16/39 (41%), Positives = 22/39 (56%) Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 LEI P+ VDVNVHP K + F + I + Q I+ + Sbjct: 227 LEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKL 265 >gi|19115329|ref|NP_594417.1| MutL family mismatch-repair protein Pms1 [Schizosaccharomyces pombe 972h-] gi|1709684|sp|P54280|PMS1_SCHPO RecName: Full=DNA mismatch repair protein pms1 gi|1246854|emb|CAA65400.1| pms1 [Schizosaccharomyces pombe] gi|2239195|emb|CAB10113.1| MutL family mismatch-repair protein Pms1 [Schizosaccharomyces pombe] Length = 794 Score = 250 bits (638), Expect = 5e-64, Method: Composition-based stats. Identities = 95/408 (23%), Positives = 165/408 (40%), Gaps = 15/408 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++ + +++I +G++I + A+KEL+ENSLD+ ++ +E G + ++ DNG Sbjct: 3 TVKPIDANTVHKICSGQVITDVASAVKELVENSLDSGATTIEIRFKNYGINSIEVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G+ + + ++H TSKI+D D + TFGFRGEAL S+ AV + + + G Sbjct: 63 GIDAGDYESIGKKHFTSKITDFEDLEALQTFGFRGEALSSLCAVGQVIISTATQNEAPKG 122 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLN-FLKSEQVETNLITDVIRRMA 176 Q+ + E + + GT V V DLF T+P R K+ + E + +++ A Sbjct: 123 VQLNLDHEGSLKDKLTIPFQRGTSVMVNDLFCTLPVRRKLLEKNYKREFSKAISLLQAYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQ 234 F N K+ STN + I V G ++ + N+ ++ Sbjct: 183 TISTNKRFMVYHQTKNSGKLLQLSTNSNKDMKLNIMNVFGTKVSSSLIP----WNDGIIE 238 Query: 235 GYTGIPT--FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 GY P R + + +FIN R V I I+ + + P + L I Sbjct: 239 GYISRPHVGSTRASNERQMLFINRRLVNLPKIARVIQEVFKPYSMA-QSPFFAINLRITN 297 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ-DNAP 351 +D+NV P K + I FI S+Q G + S S+ + S Q ++ Sbjct: 298 GTIDINVSPDKKSVFLSEEDSIIEFIKNSLQNLCESCGHAISCSRSQSIFSYSSQIPDSS 357 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 + E ++ S + + S Sbjct: 358 GDSTDQELPQSIPATESETSDDSSFSYKRSPCKRKLVEATAQPAISTS 405 Score = 145 bits (365), Expect = 3e-32, Method: Composition-based stats. Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 8/191 (4%) Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + Q ++ +I+ + L I+DQHA+ E+ +E ++ + I SQ L+ P+ Sbjct: 607 DFLRMRVVGQFNRGFIVVVHGNNLFIIDQHASDEKFNYEHLKSNL---VINSQDLVLPKR 663 Query: 463 IDLLEGECALIMEHDEDLHRLGI----KAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 +DL E ++++H + + R G + N + +P + L +II Sbjct: 664 LDLAATEETVLIDHIDLIRRKGFGVAIDLNQRVGNRCTLLSVPTSKNVIFDTSDLLEIIS 723 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + R+E +LA+ AC S+ GR + EMN ++R + + C HGRP Sbjct: 724 VLSEHPQIDPFSSRLERMLASKACRSSVMIGRALTISEMNTIVRHLAELSKPWNCPHGRP 783 Query: 579 TFIK-LKLSDI 588 T L+L DI Sbjct: 784 TMRHLLRLKDI 794 >gi|119189999|ref|XP_001245606.1| hypothetical protein CIMG_05047 [Coccidioides immitis RS] Length = 939 Score = 249 bits (637), Expect = 6e-64, Method: Composition-based stats. Identities = 95/430 (22%), Positives = 166/430 (38%), Gaps = 32/430 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + I+QI +G++I +KEL+ENSLDA ++ ++ G ++ DNG Sbjct: 3 TIKAIEARSIHQIQSGQVIVDLCSVVKELVENSLDAGATSIDIRFKNNGLDLIEVQDNGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G+ +H TSK+S +D S++ TFGFRGEAL S+ A+S +++ Sbjct: 63 GIPPNNYEGVALKHHTSKLSTFEDLSSLQTFGFRGEALSSLCALSDFHIVTAQANQAPKA 122 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ K+ + + VA GT+ V LF +P R K+ + E + ++ A Sbjct: 123 TRLDFEVSGKLKNTQVVAGQRGTVASVEGLFQRLPVRRRELEKNIKREYGKVLGLLHAYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEK------- 227 V F + +T N E IS V G + + L+ + Sbjct: 183 CISTGVRFNVKNQMPKGKSVVVFATKSNPTTKENISNVYGAKTLLALIPLDLELEFEPSA 242 Query: 228 ------------SNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 N+I + GY P F R ++ F+N R I Y Sbjct: 243 ESKTSRRQQDGLVNKIFVHGYISKPVFGEGRQTPDRQMFFVNSRPCGLPQIARAFNEVYR 302 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN-KKGIS 332 + + P + E++ DVNV P K I + + + S+ + + Sbjct: 303 SF-NISQSPFIFANFEMNTNAYDVNVSPDKRTILLHDAGALIESLKTSLTELFEGQDQTV 361 Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 S L+ S+ Q + P A + +N+ E + + + D + E Sbjct: 362 PQSQLAVPRQSTMKQ--LVNKNAPSIAAAPSNSLPTTQRSEEAIGVDKEVQESDHEFDEQ 419 Query: 393 NDPVEESEAT 402 + S Sbjct: 420 RTSLSASPEP 429 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 71/184 (38%), Gaps = 13/184 (7%) Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 L Y S E+ Q++ T L +++ V + L I Sbjct: 718 SLKNYKASEEPISEEASEQQDSAETRLSLTVSKDDFAKM--RVVGQFNLGFILAIRPGTD 775 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 ++ + T D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I Sbjct: 776 STDFQDNPTKDELFIIDQHASDEKYNFERLQ---AETVVQNQRLVRPKTLDLTAVEEEVI 832 Query: 474 MEHDEDLHRLGIKA-------ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 +++ L + G E G I +P + L ++I + +S Sbjct: 833 IDNIPTLEKNGFIVDIDTSGDEPIGRRCKLI-SLPLSKEVVFNTRDLEELIVLLSESPQH 891 Query: 527 YTLQ 530 + Sbjct: 892 HRAP 895 >gi|33416431|gb|AAH55651.1| Pms1 protein [Danio rerio] Length = 372 Score = 249 bits (637), Expect = 6e-64, Method: Composition-based stats. Identities = 85/329 (25%), Positives = 159/329 (48%), Gaps = 21/329 (6%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L + + + + ++I +KELIENSLDA SS +E + G ++ DNG G+ Sbjct: 2 KALPPETVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + ++ + +H TSKI +D + T+GFRGEAL SI A+S + + ++ ++ Q Sbjct: 62 KATDVSVMAVKHYTSKISCHEDLEQLETYGFRGEALASICAISEVIITTKTADDDFSIQY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 ++ +I S +P + GT V +LF +P R + K + E + +++ A+ Sbjct: 122 SVDHNGQIVSQKPSHLGQGTTVCAANLFKNLPVRRQYYSNTKKCKDELKRVQNLLMAYAV 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE--LNEKSNEITLQG 235 P++ T S K+ ++ +S + + V+G + N + +++ EIT+ G Sbjct: 182 IKPELRVTLSHNKAVVWQ---KSRVSDHRTALMAVLGAASVANMLPIQHHQEQPEITIDG 238 Query: 236 YTGIP-----TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG-----RYPVVV 285 + P + + ++ ++F+N R V K IL I+ Y RYP + Sbjct: 239 FFPKPGSDLNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQSNSESVSRRYPTFM 298 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 + + I VDVN+ P K+ + +N + Sbjct: 299 MNITIPASTVDVNLTPDKTEVMLQNKDEV 327 >gi|212530184|ref|XP_002145249.1| DNA mismatch repair protein (Pms1), putative [Penicillium marneffei ATCC 18224] gi|210074647|gb|EEA28734.1| DNA mismatch repair protein (Pms1), putative [Penicillium marneffei ATCC 18224] Length = 1011 Score = 249 bits (637), Expect = 7e-64, Method: Composition-based stats. Identities = 91/449 (20%), Positives = 173/449 (38%), Gaps = 27/449 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I +KEL+ENSLDA ++ +E G ++ DNG Sbjct: 3 TIKPIEGRSVHQIQSGQVIVDLCSVVKELVENSLDAGATSIEVRFKNDGLDSIEVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPP-QNNTG 118 G+ + +H TSK++ DD +++ TFGFRGEAL S+ AVS+ +++ Q Sbjct: 63 GIDPQNYESIALKHYTSKLASYDDLTSLTTFGFRGEALSSLCAVSNFHIITAQAHQAPKA 122 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ K+ + VA GT V + +LF +P R K+ + E + +++ A Sbjct: 123 NKLEFEHSGKLKGSQIVAGQKGTTVSISNLFSRLPVRRKELEKNIKRELGKVINLLNEYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKSNE---- 230 V F+ S + ++ +T N + I+ V G + + L + Sbjct: 183 CISTGVRFSVKNTDSKKRQLVLLTTKANASIRDNIANVYGAKTLLTLIPLELELEFEPSA 242 Query: 231 -----------ITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP 277 I ++GY P RG ++ ++N R I Y Sbjct: 243 TGKRLNRDLNKIHVRGYVSRPVVGEGRGTRDRQMYYVNSRPCGIPQIAKAFNEVYKTY-N 301 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSS 335 + + P V+ ++D DVNV P K I + + + +++ + ++ + S Sbjct: 302 ISQAPFVLADFQMDTNAYDVNVSPDKRTILLHDSAALIESLKEALDQMFQDAEQTVPQSQ 361 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 K + Q P S T + S + + + Sbjct: 362 FTINKQQTDIQQRLKPSPMRAPLDRSRTEQATPTEESQTDRSEPVQVTHQHAQEDKTAEV 421 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTD 424 + T I ++ ++ Sbjct: 422 ADNENITQETTDSQVTAISEDAAADESDH 450 Score = 130 bits (326), Expect = 9e-28, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 22/178 (12%) Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I E+ L + Sbjct: 783 DELFIIDQHASDEKYNFERLQ---AETVVQNQRLVHPKTLDLTAVEEEIIRENKLALEKN 839 Query: 484 GIKAE-------RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL------- 529 G E G + +P + L ++I + ++ T+ T Sbjct: 840 GFVIEVDDSGNEPIGRRCKLV-SLPLSKEVVFDIRDLEELIVLLSEAPTSATRNATTSDT 898 Query: 530 ----QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ + A AC SI G+ + +M + +R M C HGRPT L Sbjct: 899 YIPRPSKVRKMFAMRACRSSIMIGKTLTVKQMEKAVRNMGTIDKPWNCPHGRPTMRHL 956 >gi|329664144|ref|NP_001192867.1| mismatch repair endonuclease PMS2 [Bos taurus] gi|297490603|ref|XP_002698266.1| PREDICTED: PMS2 postmeiotic segregation increased 2 (S. cerevisiae) [Bos taurus] gi|296473094|gb|DAA15209.1| PMS2 postmeiotic segregation increased 2 [Bos taurus] Length = 864 Score = 249 bits (637), Expect = 7e-64, Method: Composition-based stats. Identities = 86/345 (24%), Positives = 153/345 (44%), Gaps = 27/345 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENS+DA ++ ++ + G +++DNG G Sbjct: 15 IKPIDRKSVHQICSGQVVLGLSTAVKELVENSVDAGATSIDLRLKDYGVELIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHTSVKVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF+T+P R F ++ + E + V++ I Sbjct: 135 LVFDHNGKILQKTPYPRPRGTTVSVQQLFYTLPVRHKEFQRNIKKEFAKMVQVLQAYCII 194 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE---------- 226 V + + + R + S + + E I V G+ + + + + Sbjct: 195 SAGVRISCTNQVGQGKRQPVVCTSGSSSMKENIGLVFGQKQLQSLIPFVQLPPSDSICEE 254 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 N + G+ G + ++ + FIN R + + Y Sbjct: 255 YGLSCSQALHNLFCISGFVSHCAHGVGRSSTDRQFFFINRRPCDPSKVSRLVNEVYHMY- 313 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 +YP VVL + +D VD+NV P K I + ++ + S Sbjct: 314 NRHQYPFVVLNVSVDSACVDINVTPDKRQILLQEEKLLLAVLKTS 358 Score = 149 bits (377), Expect = 9e-34, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 9/191 (4%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E T + Q + +II++ + IVDQHA E+ FE ++Q T + Q L Sbjct: 669 EISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQH---TVLQGQRL 725 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQL 512 + P+ + L A+++E+ E + G A I +P + PQ Sbjct: 726 IAPQTLSLTAVNEAILIENLEIFRKNGFDFVIDEHAPVTERAKLI-SLPTSKNWTFGPQD 784 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + +++ + DS R+ + A+ AC S+ G + + EM +L+ M + + Sbjct: 785 IDELLFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTPLNTSEMKKLITHMGEMDHPWN 844 Query: 573 CNHGRPTFIKL 583 C HGRPT + Sbjct: 845 CPHGRPTMRHI 855 >gi|289665669|ref|ZP_06487250.1| DNA mismatch repair protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 428 Score = 249 bits (637), Expect = 8e-64, Method: Composition-based stats. Identities = 130/426 (30%), Positives = 200/426 (46%), Gaps = 38/426 (8%) Query: 70 MAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEK 127 +AV RH TSKI+ DD + T GFRGEALPSI +VS TL SR G + I G + Sbjct: 1 LAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLTSRRHDAEHGFALEIDGGR 60 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFS 187 + V P A PGT VEVR+LFF +PAR FL++E+ E I + +R +A+A P V S Sbjct: 61 LGEVVPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLALARPDVELRVS 120 Query: 188 TIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNA 247 + + + + +GEDF A+ ++ + + L G+ P ++R + Sbjct: 121 HNGKPSRRYKPGDLYSDAR--LGETLGEDFARQALRVDHSGSGLRLHGWVAQPHYSRAST 178 Query: 248 NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIR 307 +Q Y+++NGR+V+D+ + ++ AY + + GR P VL LE+DP +VDVNVHPAK +R Sbjct: 179 DQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDVNVHPAKHEVR 238 Query: 308 FRNPTIIRNFIIQSIQKAINKKGISTSS--------------------------VLSKKM 341 FR +I +F+ ++Q A+ + Sbjct: 239 FREARLIHDFVYLTLQDALAHTRAGATPNSIGSDGAGYTGATAGGTGNIASGGLPSHGTA 298 Query: 342 ISSFHQDNAPKTHLPKYAT------SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 S P L+ S + Sbjct: 299 PGSSGSGYNYTNWTPSQTPLGLRVDEARAAYSALYAPPPPSSAQQSAGMPSMAGTGLPAT 358 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 E+S LG A AQ+H YI+++ +GL++VD HAAHER+ +E+++ +S + +Q Sbjct: 359 AEDS--GVPPLGYAIAQLHGIYILAENAEGLIVVDMHAAHERIGYERLKNAHDSIGLHAQ 416 Query: 456 TLLTPE 461 LL P Sbjct: 417 PLLVPM 422 >gi|224131150|ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1| predicted protein [Populus trichocarpa] Length = 915 Score = 249 bits (636), Expect = 9e-64, Method: Composition-based stats. Identities = 95/440 (21%), Positives = 175/440 (39%), Gaps = 10/440 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR +++ +++I AG++I S A+KEL+ENSLDA ++ +E + G FQ+ DNG Sbjct: 7 TIRPINKAAVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGLESFQVIDNGC 66 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ + +H TSK+ D D ++ TFGFRGEAL S+ + LT+ +R Sbjct: 67 GVSPNNFKVLALKHHTSKLGDFHDLQSLTTFGFRGEALSSLCVLGDLTVETRTKNEPVAT 126 Query: 120 QIAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 + + +++ R A GT V V+ LF ++P R F ++ + E + ++ A+ Sbjct: 127 HLTFNHSGLLTAERKTARQVGTTVTVKKLFSSLPVRSKEFSRNIRKEYGKLISLLNAYAL 186 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN-EITLQ 234 V S K+ + + + + + I V G + + ++ + ++ Sbjct: 187 ISKGVRIVCSNTTGKNAKSVVLKTQGSDSLKDNIITVFGVNTFSCLEPVDIDISGSCKVE 246 Query: 235 GYTGI--PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 G+ R ++ Y F+NGR V + + Y +YP+ ++ I Sbjct: 247 GFLSKSGQGSGRNLGDRQYYFVNGRPVDMPKVSKLVNELYKGANSR-QYPIAIMNFTIPT 305 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK 352 DVNV P K I F + + I + + ++K + S + + Sbjct: 306 TACDVNVTPDKRKIFFSDESSILLALREGLEKNYSSSNSCYSVNKFENHAKAADSSQLCS 365 Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 S ++ +E + D P V E + Sbjct: 366 PREKSNMLSKQSSANGNDSEETQTDAEDSSPLMTVEVKSKPFQVGERSIHDIEEKFMMKD 425 Query: 413 IHQNYIISQTTDGLVIVDQH 432 + TD L + Sbjct: 426 FALRLHGIKKTDSLTNSNSC 445 Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats. Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 20/198 (10%) Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + Q + +II + L IVDQHAA E+ FE++ ST + Q LL P Sbjct: 704 DFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---CQSTILNQQPLLRPLR 760 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAER----FGPNAIAIREIPAILSKKNIPQLLRDIID 518 ++L E + + + + + G E + ++ +P + + ++D+I Sbjct: 761 LELSPEEEVVASMNLDIIRKNGFALEEDPHALPGHHFKLKAVPFSKNITFGVEDVKDLIS 820 Query: 519 EIIDSSTTYTL-------------QDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 + DS ++ R+ + A+ AC S+ G + EM ++L + Sbjct: 821 TLADSQGECSIISRYKMDTADSVCPSRVHAMFASRACRSSVMIGDALGRNEMQKILEHLV 880 Query: 566 KNPNSSQCNHGRPTFIKL 583 + C HGRPT L Sbjct: 881 DLKSPWNCPHGRPTMRHL 898 >gi|303322639|ref|XP_003071311.1| DNA mismatch repair protein MutL family protein [Coccidioides posadasii C735 delta SOWgp] gi|240111013|gb|EER29166.1| DNA mismatch repair protein MutL family protein [Coccidioides posadasii C735 delta SOWgp] Length = 1026 Score = 249 bits (636), Expect = 1e-63, Method: Composition-based stats. Identities = 93/430 (21%), Positives = 164/430 (38%), Gaps = 32/430 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + I+QI +G++I +KEL+ENSLDA ++ ++ G ++ DNG Sbjct: 5 TIKAIEARSIHQIQSGQVIVDLCSVVKELVENSLDAGATSIDIRFKNNGLDLIEVQDNGH 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G+ +H TSK+S +D S++ TFGFRGEAL S+ A+S +++ Sbjct: 65 GIPPNNYEGVALKHHTSKLSTFEDLSSLQTFGFRGEALSSLCALSDFHIVTAQANQAPKA 124 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ K+ + + VA GT+ V LF +P R K+ + E + ++ A Sbjct: 125 TRLDFEVSGKLKNTQVVAGQRGTVASVEGLFQRLPVRRRELEKNIKREYGKVLGLLHAYA 184 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVE----------- 223 V F + +T N E IS V G + + Sbjct: 185 CISTGVRFNVKNQMPKGKSVVVFATKSNPTTKENISNVYGAKTLLALIPLDLELEFEPSA 244 Query: 224 --------LNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 + + N+I + GY P F R ++ F+N R I Y Sbjct: 245 ESKTSRRQQDGQVNKIFVHGYISKPVFGEGRQTPDRQMFFVNSRPCGLPQIARAFNEVYR 304 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS-IQKAINKKGIS 332 + + P + E++ DVNV P K I + + + S + + Sbjct: 305 SF-NISQSPFIFANFEMNTNAYDVNVSPDKRTILLHDAGALIESLKASLTKLFEGQDQTV 363 Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 S L+ S+ Q + P A + +N+ E + + + D + + Sbjct: 364 PQSQLAVPRQSTMKQ--LVNKNAPSIAAAPSNSSPTTQRSEEAIGVDKEVQESDHEFDKQ 421 Query: 393 NDPVEESEAT 402 + S Sbjct: 422 RTSLSASPEP 431 Score = 127 bits (318), Expect = 7e-27, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 96/260 (36%), Gaps = 36/260 (13%) Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 L Y S E+ Q++ T L +++ V + L I Sbjct: 720 SLKHYKASEEPISEEASEQQDSAETRLSLTVSKEDFAKM--RVVGQFNLGFILAIRPGTD 777 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 ++ + T D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I Sbjct: 778 STDFQDNPTKDELFIIDQHASDEKYNFERLQ---AETVVQNQRLVRPKTLDLTAVEEEVI 834 Query: 474 MEHDEDLHRLGIKA-------ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 +++ L + G E G I +P + L ++I + +S Sbjct: 835 IDNIPTLEKNGFIVDIDTSGDEPIGRRCKLI-SLPLSKEVVFNTRDLEELIVLLSESPQH 893 Query: 527 Y-----------------------TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 + ++ + A AC SI G+ + +M R++R Sbjct: 894 HRASQDDGDVDPASSSSQFTNLYVPRPGKVRKMFAMRACRSSIMIGKSLTVKQMERVVRH 953 Query: 564 MEKNPNSSQCNHGRPTFIKL 583 M C HGRPT L Sbjct: 954 MGMIDKPWNCPHGRPTMRHL 973 >gi|242065626|ref|XP_002454102.1| hypothetical protein SORBIDRAFT_04g024570 [Sorghum bicolor] gi|241933933|gb|EES07078.1| hypothetical protein SORBIDRAFT_04g024570 [Sorghum bicolor] Length = 780 Score = 248 bits (634), Expect = 2e-63, Method: Composition-based stats. Identities = 91/341 (26%), Positives = 165/341 (48%), Gaps = 10/341 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ +S+ ++++I +G++I S A+KEL+ENSLDA ++ VE + G+ +F++ DNG G Sbjct: 19 IKPISKAVVHRICSGQVIFDLSSAVKELVENSLDAGATSVEVSLKAYGEEWFKVVDNGCG 78 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ +H TSKISD D ++ TFGFRGEAL S+ A+ LT+ +R Sbjct: 79 ISPSNFQALALKHHTSKISDFSDLGSVVTFGFRGEALSSLCALGKLTVETRSKDEPVATH 138 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + + S R A GT V V LF T+P R F ++ + E + ++ A+ Sbjct: 139 LEFEHSGVVVSERKTARQVGTTVTVEKLFSTLPVRSKEFSRNIRKEYGKVISLLNAYALI 198 Query: 179 YPKVS--FTFSTIKSNRYKMNFQSTNGNFPERISQVIGED-FINNAVELNEKSNEITLQG 235 V T + K+++ + + + + I V G + F S+ ++G Sbjct: 199 AKGVRLLCTNTVGKNSKMVVLRTQGSSSMKDNIITVFGPNTFKCLEPFSVTTSDGCQIEG 258 Query: 236 YTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 + P G + ++ + ++NGR + + + ++ +YPVV+L I Sbjct: 259 FLSKPGPGTGRSSGDRQFFYVNGRPIDMPKVTKLVNE-LYKSSNAKQYPVVILDFRIPTT 317 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 DVNV P K + F + ++I + ++++ + S S Sbjct: 318 SYDVNVAPDKRKVFFSSESLILQSLREAVENLYSPLQCSFS 358 Score = 40.8 bits (94), Expect = 0.68, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 5/151 (3%) Query: 331 ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 +T S + + F AP + + + + ++ Y Sbjct: 634 HTTESDVDEHRGRCFSASGAPNKYSESRHQNAS--ADSPLPDAQDYDDGAVVCYAPVQYP 691 Query: 391 EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 V E + Q + +II + L IVDQHAA E+ FE + ST Sbjct: 692 IIQFTVAELRRRRKNGYMVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFECL---SQST 748 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 + Q LL P +DL E ++ + + Sbjct: 749 TLNIQPLLQPLRLDLSPEEEVIVSMNMSTIR 779 >gi|73989708|ref|XP_859237.1| PREDICTED: similar to MutL protein homolog 1 isoform 4 [Canis familiaris] Length = 724 Score = 248 bits (633), Expect = 2e-63, Method: Composition-based stats. Identities = 100/374 (26%), Positives = 158/374 (42%), Gaps = 36/374 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + AL SI V+H+T+ ++ + + Sbjct: 68 IR-------------------------------ALASISHVAHVTITTKTAEAKCAYRAT 96 Query: 123 ISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 97 YSDGKLKAPPKPCAGNQGTQITVEDLFYNISTRRKALKNPSEEYGKILEVVGRYSIHNSG 156 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYTGI 239 +SF+ + N + I + G +E+ + + GY Sbjct: 157 ISFSVKKQGETVADVRTLP-NATTVDNIRSIFGNAVSRELIEVGCEDKTLAFKMNGYISN 215 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDVNV Sbjct: 216 ANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNV 274 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP K + F + I + Q I+ + S + Sbjct: 275 HPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEVVKSTTGAT 334 Query: 360 TSLTNTQEKLFLQE 373 S T + +K++ + Sbjct: 335 PSSTGSGDKVYAHQ 348 >gi|225684832|gb|EEH23116.1| DNA mismatch repair protein PMS1 [Paracoccidioides brasiliensis Pb03] Length = 1105 Score = 248 bits (633), Expect = 2e-63, Method: Composition-based stats. Identities = 105/523 (20%), Positives = 193/523 (36%), Gaps = 48/523 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I +KEL+ENSLDA ++ ++ G ++ DNG Sbjct: 41 TIKAIEARSVHQIQSGQVIIDLCSVVKELVENSLDAGATSIDIRFKNNGLDLIEVQDNGK 100 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTL-MSRPPQNNTG 118 G++ ++ +H TSK+S DD S++ +FGFRGEAL S+ A+S+ + S+ Q Sbjct: 101 GISPDDYETVALKHYTSKLSKLDDLSSLQSFGFRGEALSSLCALSNFHIVTSQAHQAPKA 160 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 +++ K+ + VA GT V +LF +P R K+ + E + ++ A Sbjct: 161 SKLEFEISGKLKDTQVVAGQRGTTASVENLFNRLPVRRRELEKNIKREYGKVLGLLHAYA 220 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELN--------- 225 V F S + +T N E IS + G + L+ Sbjct: 221 CVSTGVRFNVKNQMSKGKNVLVFATKSNATTKENISNIYGAKTLLALTPLDLELEFQPSA 280 Query: 226 ----------EKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 +++N+I +QG+ P F R ++ F+N R I Y Sbjct: 281 TNGKSIRGGIQEANKIFIQGHISKPIFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYK 340 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 + + P + ++D DVNV P K I + + + S+ + ++ + Sbjct: 341 SF-NILQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGTLIESLKTSLTELFERQDQTV 399 Query: 334 SSVLSKKMISSFHQDNAPKTH--LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 L S+ H+ + T L + +N ++ + Q+ + Sbjct: 400 PQSLIPGKQSTLHRPSGKDTASVLASTKPAESNRAKQSYKQDGGEDEERDEEGEQRAMRT 459 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 E + + Q DG+ H + R D + + Sbjct: 460 FVQRFTERSK----------TLPEIPETQQNEDGMESRQLTEDHSATNEDARRVDLATQE 509 Query: 452 IT-------SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 T + L A E ++ LG Sbjct: 510 ATEIAPSQYPTREIKGSRPSLSTPPTAPSDEQADEQINLGFTL 552 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 31/195 (15%) Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I+++ L Sbjct: 874 HKDDELFIIDQHASDEKYNFERLQ---AETVVQNQRLVKPKTLDLTAVEEEIIIDNLPAL 930 Query: 481 HRLGI--KAERFGPNAI----AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT------ 528 + G + +R G I + +P + L ++I + +S + Sbjct: 931 EKNGFIVEVDRSGDEPIGRRCKLTSLPLSKEVVFNIRDLEELIVLLGESPQAQSAPSPSS 990 Query: 529 ---------------LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 ++ + A AC SI G+ + + +M +++R M C Sbjct: 991 FSTLSSSPLTSKYVPRPSKVRKMFAMRACRSSIMIGKSLTAKQMGKVVRHMGMIDKPWNC 1050 Query: 574 NHGRPTFIKL-KLSD 587 HGRPT L L + Sbjct: 1051 PHGRPTMRHLMSLGE 1065 >gi|224006522|ref|XP_002292221.1| mlh1-like protein [Thalassiosira pseudonana CCMP1335] gi|220971863|gb|EED90196.1| mlh1-like protein [Thalassiosira pseudonana CCMP1335] Length = 749 Score = 247 bits (631), Expect = 3e-63, Method: Composition-based stats. Identities = 104/425 (24%), Positives = 183/425 (43%), Gaps = 26/425 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L ++++++IAAGE+++RP +KEL+ENSLDA+ ++++ GG ITDNG Sbjct: 3 KIRPLPKEVVDRIAAGEVVQRPVSVVKELLENSLDADGTQIDIQCQKGGLESITITDNGT 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ +P+A R TSK+ DD +I TFGFRGEAL S V + + NN Sbjct: 63 GISPTSLPLACTRFATSKLVTVDDLKSIRTFGFRGEALASASMVGRVCISKTLQNNNCAF 122 Query: 120 QIAISGEKIS---------------SVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSE 161 ++ + +P A GT + V+DLF+ IP+R + +SE Sbjct: 123 KMHYRDGNPTSDPKLPTNKNSTATIKPKPSAGKEGTTITVQDLFYNIPSRRRAMEGRRSE 182 Query: 162 QVETNLITDVIRRMAIAYPKV-SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 + E + I + ++R A+ K + + I + G Sbjct: 183 RDEYDRILNCVQRYAVHEAKRGVGFVCRGGGGGGGGKGAAGRATTKDVIGHIFGTAVSRE 242 Query: 221 AVELNEKSNEITL--QGYTGIPTFNRGNAN-QFYVFINGRTVQDKFILSTIRTAYAETIP 277 + LN ++ G +++ ++ F +FIN R V+ + + + Y++ +P Sbjct: 243 LLPLNAGEGDVEAVTTGLITNGSYSAPKSSAAFLLFINDRLVESASLRRAVESIYSDALP 302 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL 337 G P V L LE+ VDVNVHP K + F + + + ++++ I ++S Sbjct: 303 KGGKPFVYLSLELPGPHVDVNVHPTKREVAFLHEDRLCVALAAAVKEVIGS--ATSSRTF 360 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 + + + + +E L + T ++ SD + E Sbjct: 361 AVAASGALLAPEEKRVRVQPKKAIAMGEREGLVVSTASNVTTEIGESDSGAVDDAMAVDE 420 Query: 398 ESEAT 402 Sbjct: 421 PEPQQ 425 >gi|328793875|ref|XP_003251937.1| PREDICTED: mismatch repair endonuclease PMS2-like, partial [Apis mellifera] Length = 599 Score = 247 bits (631), Expect = 4e-63, Method: Composition-based stats. Identities = 118/596 (19%), Positives = 232/596 (38%), Gaps = 82/596 (13%) Query: 65 SEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 ++ +H TSK+ + D + ++TFGFRGEAL S+ +++ L++++R + G ++ Sbjct: 2 EQDFEGLGLKHHTSKLQEFSDLTEVNTFGFRGEALSSLCSLAELSIITRHCTSEYGFKLQ 61 Query: 123 ISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAYP 180 + P A GT V V+++F +P R F ++ + E ++ + Sbjct: 62 FDHNGLLQKKEPCAREIGTTVHVKNIFKCLPVRVKEFQRNLKKEYIRAIQILYSYCLIST 121 Query: 181 KVSFTFST-----------------IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE 223 + T + N + F + N +I + ++ Sbjct: 122 ETKITCTNSVSGKASNLVVNTVNSSNILNNINIIFGKKSSNGLIKIELLPPDELTLQEYN 181 Query: 224 LNEKSN-EITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 L + Y R +++ + +INGR I I Y + + Sbjct: 182 LPNNIIVDFEWDCYISSCEHDVGRFTSDRQFFYINGRPCDLIKINKLINQIYHKY-NNKQ 240 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSI-------QKAINKKGIST 333 YP + L L+++ D+NV P K I +I + S+ Q + +S Sbjct: 241 YPFIFLNLKLNKYSTDINVTPNKRTIFCTQQNLILATLKYSLISKWDKLQGNLTINPLSK 300 Query: 334 SSVLSKKMISSFHQDNAPK--------THLPKYATSLTNT-------------------- 365 + K+ IS ++D + K + + +Y S N Sbjct: 301 LNFGIKRTISPTNEDRSIKRLHKLNEISDINQYDNSQNNISYDMKILNSIEMPISILTIK 360 Query: 366 ---QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-----EATHYQLGIACAQIHQNY 417 QEK + +++N + + +N E + Q + + Sbjct: 361 QKLQEKQNILPKYVTSNTTIKFKAKMEANENSKAENELKTQLTKDSFFKMEIIGQFNLGF 420 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 II++ + L I+DQHA+ E+ FEK+ N T++ +Q L+ P+ +++ +++EH Sbjct: 421 IITRLKEDLFIIDQHASDEKYRFEKL---NNETQLKTQKLIIPKFLNISAVNETILIEHQ 477 Query: 478 EDLHRLGIKAE-----RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT---- 528 + G + FG I + IP + + + ++I I + Sbjct: 478 KTFEDNGFFFKINSKAEFGHR-IQLTGIPVSGYWQFGQEDIEELIFLIREGGVENKEKNI 536 Query: 529 -LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R+ +LA+ AC G++ G+ + + +M +L+ +M + N C HGRPT L Sbjct: 537 FRPSRVRQMLASRACRGAVMIGKALNNSDMQKLIAQMAQMKNPWSCPHGRPTIRHL 592 >gi|328866647|gb|EGG15030.1| MutL DNA mismatch repair protein [Dictyostelium fasciculatum] Length = 996 Score = 247 bits (631), Expect = 4e-63, Method: Composition-based stats. Identities = 83/355 (23%), Positives = 159/355 (44%), Gaps = 30/355 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + + ++QI +G++I S A+KEL+ENSLDA++++VE + G+ ++ DNG G Sbjct: 37 IKAIDKDSVHQICSGQVILDLSTAVKELVENSLDAKATKVEIRLKEYGEDAIEVIDNGSG 96 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + + ++ TSK+S D ++ +FGFRGEAL S+ A++++++ +R + Sbjct: 97 VEAANYVALTLKYYTSKLSKFSDLESVTSFGFRGEALSSLCALANVSITTRHSSAKVAHK 156 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLK-SEQVETNLITDVIRRMAIA 178 I I+S A GT V + LF +P R K + + E + +++ A+ Sbjct: 157 IVYDQSGVITSQTECAREVGTTVTLTSLFKRLPVRYQEFKRNLKKEYAKLQTILQSYAVI 216 Query: 179 YPKVSFTFSTIKSNRYKMNF-QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 V + N ++ F S + + + + G+ ++ ++ ++G Sbjct: 217 STGVRISCYNTVKNSRQLVFSTSGCNDIKDNVVSLFGKQ-AQMLDRIDVENELFHVKGLV 275 Query: 238 GI------------------------PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 R ++ ++FINGR V + T+ + Y Sbjct: 276 SKVGQLNGVGSVVGSQTAAGGNGGLNAQMARSCGDRQFIFINGRPVDFPALTKTVNSMYH 335 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 G YPV+ L ++++P DVNV P K + + I+ I ++ K Sbjct: 336 SFQKKGSYPVLFLDIKMNPNTYDVNVTPDKRKVFIQKEEILLTLIGDHLKSHWEK 390 Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 15/248 (6%) Query: 346 HQDNAPKTHLPKYATSLTN----TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA 401 Q AP +S N + F ++ +T D E + +++ Sbjct: 727 EQQPAPTQSQGSDPSSSQNKTFLSSVGAFTAKSNRNTQQTTMDKDVAEKELSLHIKKE-- 784 Query: 402 THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 + Q + ++II++ L IVDQHAA E+ +E ++ S ++ SQ L+ P Sbjct: 785 -DFLRMQVIGQFNNSFIIARLDTDLFIVDQHAADEKYNYETLQ---KSHELISQPLIRPT 840 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGP----NAIAIREIPAILSKKNIPQLLRDII 517 I L + + ++++H + + G + + I +P P + ++I Sbjct: 841 HIQLTDEDEEILIDHLDLFKKNGFIFDVNRNAPPTKRVKIVSLPFSRKWTFGPNDIYELI 900 Query: 518 DEIIDS-STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 I +S RI + A+ AC SI G + +M ++L + + N C HG Sbjct: 901 FMIKESLPGQVCRLPRISAMFASRACKKSIVVGMPLTHEQMRKVLSNLSQLENPWCCPHG 960 Query: 577 RPTFIKLK 584 RPT L Sbjct: 961 RPTMRHLN 968 >gi|327265366|ref|XP_003217479.1| PREDICTED: PMS1 protein homolog 1-like [Anolis carolinensis] Length = 943 Score = 247 bits (631), Expect = 4e-63, Method: Composition-based stats. Identities = 87/331 (26%), Positives = 155/331 (46%), Gaps = 19/331 (5%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + + +++ ++I +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAETVRILSSSQVITSVVSVVKELIENSLDANATNVDVKLENYGFDKIEVRDNGDGI 61 Query: 64 TSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + ++P+ +H TSKIS D ++ ++GFRGEAL SI + S + + ++ + Q Sbjct: 62 RAADVPVMAVKHYTSKISSSQDLESLTSYGFRGEALASICSTSEVLITTKTANEDFSTQY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 A+ I S +P + GT V V LF +P R F K + E I ++ I Sbjct: 122 ALDRSGHIISQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTDKKCKEEMKKIQKLLMAYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT--LQG 235 P++ F+ K+ ++ ++ + V+G ++N V +I G Sbjct: 182 IKPELRIMFTHNKTVMWQ---KTRALDHKTAFMAVVGAAIMDNMVSFQRHCKDIEVLFSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAY---AETIPLGRYPVVVLL 287 + P + ++ + ++F+N R V K IL ++ Y + YPV ++ Sbjct: 239 FLPKPDSGGGLTSHPSSERSFIFVNNRPVYLKEILKLVQQYYKLKFQMDSNRSYPVFLIN 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI 318 + I P VDVN+ P KS + N I I Sbjct: 299 IIIPPSAVDVNLTPDKSQVLLHNQESICLAI 329 >gi|71001986|ref|XP_755674.1| DNA mismatch repair protein (Pms1) [Aspergillus fumigatus Af293] gi|66853312|gb|EAL93636.1| DNA mismatch repair protein (Pms1), putative [Aspergillus fumigatus Af293] gi|159129732|gb|EDP54846.1| DNA mismatch repair protein (Pms1), putative [Aspergillus fumigatus A1163] Length = 1044 Score = 247 bits (630), Expect = 4e-63, Method: Composition-based stats. Identities = 89/377 (23%), Positives = 157/377 (41%), Gaps = 30/377 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I +KEL+ENSLDA ++ +E G ++ DNG Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSIEVRFKNNGLDSIEVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G++ E +H TSK+S +D S +HTFGFRGEAL S+ A++ +++ Sbjct: 63 GISPENYENVALKHYTSKLSSYEDLSRLHTFGFRGEALSSLCALADFRIVTAQANQAPKA 122 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ K+S + VA GT V LF +P R K+ + E + +++ A Sbjct: 123 TKLEFETSGKLSKTQIVAGQKGTTASVEGLFKKLPVRRRELEKNIKREYGKVLNLLHAYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNF--PERISQVIGEDFINNAVE----------- 223 V F+ + STNGN E I+ V G + + Sbjct: 183 CISTGVRFSVRNTVGKNRNVMVFSTNGNQTTKENIANVYGAKTLLALIPLDLTLEFEPSA 242 Query: 224 -----LNEKSNEITLQGYTGIPTFN--RGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 + + I ++G+ P F R ++ F+N R I Y Sbjct: 243 AGRRTAEGELHTIQVKGHISRPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYKSF- 301 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 + + P V L +D DVNV P K I + + + + ++++ + +T Sbjct: 302 NVSQSPFVFADLHMDTNAYDVNVSPDKRTILLHDAGALIDSL----KQSLTEMFEATDQT 357 Query: 337 LSKKMISSFHQDNAPKT 353 + I+ + Q + Sbjct: 358 VPLSQIADYKQSGPKQQ 374 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 52/256 (20%), Positives = 95/256 (37%), Gaps = 30/256 (11%) Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 LPK + + Q L + + + T + + + Q Sbjct: 733 SLPKIESQMKKVQHSLRSYRKDVDNSQEDTAAAATVTAEERLSLTVTKDDFARMRIIGQF 792 Query: 414 HQNYIISQTT---------DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 + +I++ D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +D Sbjct: 793 NLGFILATRPSEDGSADSKDELFIIDQHASDEKFNFERLQ---AETVVQNQRLVQPKRLD 849 Query: 465 LLEGECALIMEHDEDLHRLGIKAE-------RFGPNAIAIREIPAILSKKNIPQLLRDII 517 L E +++E+ L + G E G I +P + L ++I Sbjct: 850 LTAVEEEIVIENRAALEKNGFVVEVDDSGNEPIGQRCKLI-SLPLSKEVVFGVRDLEELI 908 Query: 518 DEIIDSSTTYTL----------QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 + + T + ++ + A AC SI G+ + +M R++R M Sbjct: 909 VLLSEMPATDSRGSAMQTHIPRPSKVRKMFAMRACRSSIMIGKSLTQTQMVRVVRNMGTI 968 Query: 568 PNSSQCNHGRPTFIKL 583 C HGRPT L Sbjct: 969 DKPWNCPHGRPTMRHL 984 >gi|295675041|ref|XP_002798066.1| DNA mismatch repair protein pms1 [Paracoccidioides brasiliensis Pb01] gi|226280716|gb|EEH36282.1| DNA mismatch repair protein pms1 [Paracoccidioides brasiliensis Pb01] Length = 1067 Score = 247 bits (630), Expect = 4e-63, Method: Composition-based stats. Identities = 103/521 (19%), Positives = 190/521 (36%), Gaps = 44/521 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I +KEL+ENSLDA ++ ++ G ++ DNG Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSIDIRFKNNGLDLIEVQDNGK 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPP-QNNTG 118 G++ ++ +H TSK+S DD S++ +FGFRGEAL S+ A+S+ +++ Q Sbjct: 63 GISPDDYETVALKHYTSKLSKLDDLSSLQSFGFRGEALSSLCALSNFHIVTAQAHQAPKA 122 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 +++ K+ + VA GT V +LF +P R K+ + E + ++ A Sbjct: 123 SKLEFEISGKLKDTQVVAGQRGTTASVENLFNRLPVRRRELEKNIKREYGKVLGLLHAYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELN--------- 225 V F + +T N E IS + G + L+ Sbjct: 183 CVSTGVRFNVKNQMLKGKNVLVFATKSNATTKENISNIYGAKTLLALTPLDLELEFQPSA 242 Query: 226 ----------EKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 +++N+I +QG+ P F R ++ F+N R I Y Sbjct: 243 TNGKSIRGGIQEANKIFIQGHISKPIFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYK 302 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 + + P + ++D DVNV P K I + + + ++ + ++ + Sbjct: 303 SF-NISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGTLIESLKTTLTELFERQDQTV 361 Query: 334 SSVLSKKMISSFHQDNAPKTH--LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 L S+ H+ + T L + +N ++ + Q + Sbjct: 362 PQSLIPGKQSTLHRPSGKDTASVLASTKPAESNRAKQSYEQAEGEDEERDEEGEQTAMRT 421 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYI-ISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 E T ++ + + D +T Sbjct: 422 FVQRFTERSKTLPEIPETQQNEDRMESRQLTEGHSVTNEDTRRVD--------LATQEAT 473 Query: 451 KITSQTLLTPEI----IDLLEGECALIMEHDEDLHRLGIKA 487 +IT T E L A E E+ LG Sbjct: 474 EITLSQYPTRENKGSRPTLSTPATAPSDEQAEEQINLGFTL 514 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 31/195 (15%) Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I+++ L Sbjct: 836 HKDDELFIIDQHASDEKYNFERLQ---AETVVQNQRLVKPKTLDLTAVEEEIIIDNLPAL 892 Query: 481 HRLGI--KAERFGPNAI----AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT------ 528 + G + +R G I + +P + L ++I + +S + Sbjct: 893 EKNGFIVEVDRSGDEPIGRRCKLTSLPLSKEVVFNIRDLEELIVLLGESPQAQSARSPSS 952 Query: 529 ---------------LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 ++ + A AC SI G+ + + +M +++R M C Sbjct: 953 FSTLSSSPLTSKYVPRPSKVRKMFAMRACRSSIMIGKSLTAKQMGKVVRHMGMIDKPWNC 1012 Query: 574 NHGRPTFIKL-KLSD 587 HGRPT L L + Sbjct: 1013 PHGRPTMRHLMSLGE 1027 >gi|89269512|emb|CAJ83360.1| mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Xenopus (Silurana) tropicalis] Length = 205 Score = 247 bits (630), Expect = 5e-63, Method: Composition-based stats. Identities = 77/198 (38%), Positives = 115/198 (58%), Gaps = 3/198 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ + GG QI DNG G Sbjct: 5 IRRLEETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVTVKDGGMKLIQIQDNGTG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D SNI T+GFRGEAL SI V+H+T+ ++ + Sbjct: 65 IRKEDLDIVCERFTTSKLQSFEDLSNISTYGFRGEALASISHVAHVTITTKTADGKCAYR 124 Query: 121 IAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + K+ +P A N GT + V DLF+ I R LKS E I +V+ R AI Sbjct: 125 ASYADGKLKTPPKPCAGNQGTQISVEDLFYNISTRRKALKSPSEEHARIVEVVSRYAIHN 184 Query: 180 PKVSFTFSTIKSNRYKMN 197 +SF+ + Sbjct: 185 SGISFSVKKQGETMADVR 202 >gi|310792029|gb|EFQ27556.1| DNA mismatch repair protein MutL [Glomerella graminicola M1.001] Length = 1060 Score = 246 bits (629), Expect = 6e-63, Method: Composition-based stats. Identities = 92/420 (21%), Positives = 165/420 (39%), Gaps = 31/420 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I +KEL+ENS+DA +S ++ G ++ DNG Sbjct: 3 TIKPIEGRTVHQIQSGQVIVDLCSVVKELVENSIDAGASSIDVRFKNQGLDSIEVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSR-PPQNNTG 118 G++ + +H TSK+S D + TFGFRGEAL S+ A+S ++++ G Sbjct: 63 GISPDNYETVALKHYTSKLSTYSDLGTLQTFGFRGEALSSLSALSQFSIVTCMDKDVPKG 122 Query: 119 AQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 + S K+ VA GT V V +LF +P R ++ + E N + ++ + A Sbjct: 123 TKLDFESSGKLKETHVVAAQKGTNVIVENLFHNLPVRRRELQRNIKREWNKVIALLNQYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEK------- 227 V F+ S + ++ ST GN E + + G + V L+ + Sbjct: 183 CIQTGVKFSVSQQPTKGKRIVLFSTKGNPTTRENLVNIFGAKTMTVLVPLDLELGFEPTS 242 Query: 228 -------------SNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAY 272 S E+ +QGY P R ++ F+NGR Y Sbjct: 243 GPALKSAVKDNQVSTEVRVQGYVSRPAHGEGRQTPDRQMFFVNGRPCGLPQFAKVFNEVY 302 Query: 273 AETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 + P + +++D DVNV P K I + + + + +++ Sbjct: 303 KAY-NASQSPFIFADIQLDTHLYDVNVSPDKRTIMLHDQSRMLESLKEALASLFQSHDYP 361 Query: 333 -TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 ++ S + + ++P L + S D D P + Sbjct: 362 VPAAQQSTQKAQPSRIVAVAQNNIPDNEKGGRKPAASSTLHDGFSSEYDSEDDDQPFPRD 421 Score = 134 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 80/172 (46%), Gaps = 14/172 (8%) Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 D L I+DQHA+ E+ FE+++ T + SQ L+ P+ ++L E ++ME+ L Sbjct: 867 DELFIIDQHASDEKYNFERLQST---TVVQSQRLVHPKQLELTALEEEIVMENISALDVN 923 Query: 484 GIKAERFGPNA------IAIREIP----AILSKKNIPQLLRDIIDE-IIDSSTTYTLQDR 532 G K + + +P + ++ +L+ + D + ++ ++ + Sbjct: 924 GFKVSVDSSGSQPVGSRCKLLALPLSRETTFTLSDLEELISLLGDHHLTEARSSAPRPSK 983 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 + ++ A AC S+ G+ + +M +L+R M + C HGRPT L Sbjct: 984 VRSMFAMRACRSSVMIGKALAQKQMEKLIRHMGELDKPWNCPHGRPTMRHLS 1035 >gi|311302932|gb|ADP89040.1| MLH1-like protein 1 [Trichomonas vaginalis] Length = 779 Score = 246 bits (629), Expect = 6e-63, Method: Composition-based stats. Identities = 101/308 (32%), Positives = 155/308 (50%), Gaps = 6/308 (1%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 PS KEL+ENS+DA S R+ T + GG S +I+DNG G+ + ++P+A QRH TSKI Sbjct: 4 PSNVAKELLENSIDAGSKRISTELQNGGYSLIKISDNGCGINAADMPLACQRHATSKIQS 63 Query: 83 --DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ-IAISGEKISSVRPVAMNPG 139 D N+ TFGFRGEAL S+ VSHL+++S+ +++ G G I + V + G Sbjct: 64 FNDLRNVTTFGFRGEALFSMSCVSHLSILSKTEESSFGYSGNFQDGNLIGELSTVPITIG 123 Query: 140 TIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQ 199 T V + DLF+ P +L + I +++R AIAYP++SF+ + + Sbjct: 124 TTVTISDLFYNKPTKLRTSPDSATQNRKILQIVQRYAIAYPEISFSVICDGKEKMMTHGS 183 Query: 200 STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTV 259 S++ + + + V + + T++ Y G P+ + VF+NGR V Sbjct: 184 SSHYDVISLLYGIDAR--SATFVLTGDIAKNTTVEMYLGSPSAKKQLKES-AVFVNGRLV 240 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 Q I I Y + G P +LL + P +VDVNVHP K + F N + + I Sbjct: 241 QCDHIKRAINAVYGSFLMRGEKPFAFVLLRMPPDKVDVNVHPTKKDVIFTNEQSLIDNIC 300 Query: 320 QSIQKAIN 327 I + Sbjct: 301 DIILAELK 308 >gi|53133740|emb|CAG32199.1| hypothetical protein RCJMB04_19o6 [Gallus gallus] Length = 871 Score = 246 bits (629), Expect = 6e-63, Method: Composition-based stats. Identities = 90/467 (19%), Positives = 175/467 (37%), Gaps = 37/467 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+++ + +++I +G+++ A+KEL+ENSLDA ++ ++ + G +++DNG Sbjct: 13 TIKRIDRESVHRICSGQVVLSLGTAVKELVENSLDAGATNIDVRLKDHGAELIEVSDNGG 72 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E +H TSKI D D ++ TFGFRGEAL S+ A+S +T+ + G Sbjct: 73 GVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDVTISTCHKSAKVGT 132 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR---------LNFLKSEQVETNLIT 169 ++ KI+ P GT V ++ LF T+P R K+ T Sbjct: 133 RLVFDHNGKITQKAPYPRQQGTTVSIQQLFHTLPVRHKEFQRNIKKGICKNGSRYLAKHT 192 Query: 170 DVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN 229 + ++ T + + + + N E I V G+ + + + + Sbjct: 193 VLFQQGVRIN----CTNQVGQGKKSPVVSTTGGPNLKENIGAVFGKKQLQSLIPFVQLPP 248 Query: 230 E------------------ITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIR 269 ++ G+ G + ++ + FIN R ++ + Sbjct: 249 NEAVCEEYGLKSTDLPEKLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVN 308 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y +YP +VL + +D VD+NV P K I + ++ + S+ + Sbjct: 309 EVYH-LYNKHQYPFIVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIEMFGSD 367 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + + I + P S + E + R+ T L + Sbjct: 368 VNKLNVNQNLLDIVGNVKAPPGDAEKPWVEMSHHSETENPSSEGKRVMTLSRLRESFSLH 427 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 ++ + + +T ++ D + HE Sbjct: 428 QTESYFQSPKKVKQRHSSSKQLSLDTILSTVRTQKAVLSEDSESCHE 474 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 92/239 (38%), Gaps = 15/239 (6%) Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE------ATHYQLGIACAQIH 414 +L K+ Q+ + + S + V E E + + Sbjct: 633 ALAERLRKIVQQQQKCTETQNYRRFRAKISPGENKVAEDELRKEISKEMFAKMEIHWPVQ 692 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 SQ L I+DQHA E+ FE ++Q T + Q L+ P+ ++L +++ Sbjct: 693 LRVYNSQVESDLFIIDQHATDEKYNFEMLQQH---TVLQGQKLIAPQNLNLTAVNETVLI 749 Query: 475 EHDEDLHRLGIKAERFGPNA-----IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 E+ E + G NA + + +P + PQ + ++I + D Sbjct: 750 ENLEIFRKNGFDF-VINENAPVTQRVKLISLPTSKNWTFGPQDIDELIFMLSDCPGVMCR 808 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 R+ + A+ AC S+ G + EM +L+ M + + C HGRPT + D+ Sbjct: 809 PSRVRQMFASRACRKSVMIGTALNVQEMKKLVTHMGEIEHPWNCPHGRPTMRHIASLDL 867 >gi|311302924|gb|ADP89036.1| MLH1-like protein 1 [Trichomonas vaginalis] gi|311302928|gb|ADP89038.1| MLH1-like protein 1 [Trichomonas vaginalis] Length = 779 Score = 246 bits (629), Expect = 6e-63, Method: Composition-based stats. Identities = 101/308 (32%), Positives = 155/308 (50%), Gaps = 6/308 (1%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 PS KEL+ENS+DA S R+ T + GG S +I+DNG G+ + ++P+A QRH TSKI Sbjct: 4 PSNVAKELLENSIDAGSKRISTELQNGGYSLIKISDNGCGINAADMPLACQRHATSKIQS 63 Query: 83 --DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ-IAISGEKISSVRPVAMNPG 139 D N+ TFGFRGEAL S+ VSHL+++S+ +++ G G I + V + G Sbjct: 64 FNDLRNVTTFGFRGEALFSMSCVSHLSILSKTEESSFGYSGNFQDGNLIGELSTVPITIG 123 Query: 140 TIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQ 199 T V + DLF+ P +L + I +++R AIAYP++SF+ + + Sbjct: 124 TTVTISDLFYNKPTKLRTSPDSATQNRKILQIVQRYAIAYPEISFSVICDGKEKMMTHGS 183 Query: 200 STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTV 259 S++ + + + V + + T++ Y G P+ + VF+NGR V Sbjct: 184 SSHYDVISLLYGIDAR--SATFVLTGDIAKNTTVEMYLGSPSAKKQLKES-AVFVNGRLV 240 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 Q I I Y + G P +LL + P +VDVNVHP K + F N + + I Sbjct: 241 QCDHIKRAINAVYGSFLMRGEKPFAFVLLRMPPDKVDVNVHPTKKDVIFTNEQSLIDNIC 300 Query: 320 QSIQKAIN 327 I + Sbjct: 301 DIILAELK 308 >gi|156095127|ref|XP_001613599.1| DNA mismatch repair protein PMS2 [Plasmodium vivax SaI-1] gi|148802473|gb|EDL43872.1| DNA mismatch repair protein PMS2, putative [Plasmodium vivax] Length = 1264 Score = 246 bits (628), Expect = 8e-63, Method: Composition-based stats. Identities = 92/382 (24%), Positives = 173/382 (45%), Gaps = 16/382 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKIR + E+ I+ I + ++I S +KEL+ENS+DA+++ ++ + G Q+ DNG Sbjct: 1 MKIRNIGEESIHNICSSQVIFTLSSVVKELVENSIDADATEIKIKLVENGIKLIQVNDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFS-NIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+ RH TSKI+ +D +++T GFRGEAL S+ +S L ++++ +++ Sbjct: 61 AGIKKSNFENVCARHATSKITEFEDIHSSLNTLGFRGEALNSLCMLSDLHIVTKHEESSH 120 Query: 118 GAQIAISG-EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRM 175 G + ++S P+A GT V ++F IP R K+ + + + + ++++ Sbjct: 121 GYMLTFDNLGRLSHEEPIARLRGTTVSCENIFKNIPIRKKDFIKNIKSQLSDLLLLMQQY 180 Query: 176 AIAYPKVSFTFST------IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN 229 AI Y KV F+ N + N + + + G+ I N ++ N + Sbjct: 181 AIIYCKVKFSIQNVITVKGNVKNINLLLTNGGNETVKKSVHTIYGKKNIGNLIDFNIDAE 240 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 E L+ Y R + + + +IN R + ++ I + YP+++ + Sbjct: 241 EWKLRAYISDSNSGRRDRDIQFYYINSRPIHVLKNVNKIINSIYREFNSRLYPIIICNIL 300 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 + + D+NV P K + F + I + A+ K +S L I + Sbjct: 301 SETKNFDINVTPDKREVFFIYENELCERI----KTALVKLLTPQTSQLVDTHIGDYF-LK 355 Query: 350 APKTHLPKYATSLTNTQEKLFL 371 A LP + ++ +E F Sbjct: 356 ANNIRLPAFGRAICTREEATFA 377 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 73/223 (32%), Gaps = 71/223 (31%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L I+DQHAA E+ FEK + F + SQ L++ ++L + +I ++ E G Sbjct: 983 LFIIDQHAADEKSNFEKYNKVFT---MKSQRLISKIDLELSPAQIYVIEKNLEVFLHNGF 1039 Query: 486 KAERF------------------------------------GPNAIA-----IREIPAIL 504 E G A+ + +P Sbjct: 1040 DVEIVEEPLRKRRRGGAADGSGEADGSGQANVEDALTAAAAGEGALVQVKVYLLSLPVFN 1099 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYT---------------------------LQDRIENIL 537 K + ++ + + TY R+ IL Sbjct: 1100 GKILEVEDFMSLLHHLTEHPITYDKASFQMFIRNKGQPNKQTDTWFNYNFPRPQRVWRIL 1159 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 A+ AC ++ G+ + EM ++ +++ N C HGRPT Sbjct: 1160 ASKACRNAVMVGKALNVAEMIKIKKKLSVLKNPWNCPHGRPTI 1202 >gi|114585964|ref|XP_001170194.1| PREDICTED: MutL protein homolog 1 isoform 1 [Pan troglodytes] Length = 723 Score = 246 bits (628), Expect = 8e-63, Method: Composition-based stats. Identities = 94/327 (28%), Positives = 147/327 (44%), Gaps = 36/327 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + AL SI V+H+T+ ++ + + Sbjct: 68 IR-------------------------------ALASISHVAHVTITTKTADGKCAYRAS 96 Query: 123 ISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 S K+ +P A N GT + V DLF+ I R LK+ E I +V+ R +I Sbjct: 97 YSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSIHNAG 156 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYTGI 239 +SF+ + + I + G +E+ + + GY Sbjct: 157 ISFSVKKQGETVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYISN 215 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 ++ +FIN R V+ + I T YA +P +P + L LEI P+ VDVNV Sbjct: 216 ANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNV 274 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAI 326 HP K + F + I + Q I+ + Sbjct: 275 HPTKHEVHFLHEESILERVQQHIESKL 301 >gi|255081839|ref|XP_002508138.1| DNA mismatch repair protein-MLH2/PMS1/Pms2 family [Micromonas sp. RCC299] gi|226523414|gb|ACO69396.1| DNA mismatch repair protein-MLH2/PMS1/Pms2 family [Micromonas sp. RCC299] Length = 771 Score = 246 bits (628), Expect = 9e-63, Method: Composition-based stats. Identities = 86/401 (21%), Positives = 168/401 (41%), Gaps = 34/401 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR + +++I +G+++ + A+KEL+EN+LDA ++ +E + G+ ++ DNG Sbjct: 17 SIRPIGASSVHRICSGQVVLDLAGAVKELVENALDAGATNIEVRLRDHGQDSVEVVDNGC 76 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ S+++ M +++ TSKI +D + +FGFRGEAL S+ A+S L++ +R ++ G Sbjct: 77 GVKSDDLAMMTKKYATSKIRRFEDLDALASFGFRGEALSSLCALSDLSVTTRTADSDAGT 136 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAI 177 ++ E + + VA GT V V+++F +P R ++ + E + ++++ A+ Sbjct: 137 RVEYDAEGNVRTRGVVARAVGTTVTVQNVFARLPVRRKELARNVKREYGKLLNILQAYAL 196 Query: 178 AYPKVSFTFSTIKS----NRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 P+ S R + G+ ++ V G I+ V Sbjct: 197 INPETRIVCSHQGKGKNAPRQTVLNTQGGGSLRAAVATVFGHKTIDGMVSKAA------- 249 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR---YPVVVLLLEI 290 P RG ++ + F+NGR V Y + +P VVL + Sbjct: 250 ------PGCGRGAGDRQFFFVNGRPVDLPKAARVCNETYRQYNQTTSGTPFPCVVLDFRL 303 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST----------SSVLSKK 340 DVNV P K + + + + +++K + + S + Sbjct: 304 PTDAYDVNVTPDKRKVLLHGESKVLAGLRGALEKIWSPTAYTYAVAAAGAADGSETTRVR 363 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 + + P AT + ++ R +D Sbjct: 364 VHDAIGAARDVIAGGPSAATPALPPASAVGVKREREEDDDA 404 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 78/221 (35%), Gaps = 37/221 (16%) Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 ++ Q + +I+ D L IVDQHA+ E FE++++ + Q LL P+ Sbjct: 556 DFRDMRVVGQFNLGFILCTLGDDLFIVDQHASDEIYNFERLQRTTT---LNRQPLLVPKK 612 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGP-----NAIAIREIPAILSKKNIPQLLRDII 517 ++L E + + G ++A+ +P + ++I Sbjct: 613 LELTAAETQTVHRNMPTFLANGFGFCEVDQPPPTVRSLALNSVPFSKGITFGADDVHELI 672 Query: 518 DEIIDSS---------------------------TTYTLQDRIENILATMACYGSIRSGR 550 + + R+ +LA AC SI G+ Sbjct: 673 GMLDQGEYALPARSQLTVGLSRQSTGTPGSGLSVSEIVRPSRVRAMLAMRACRSSIMIGK 732 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 + + M R+L + C HGRPT L +D+ KL Sbjct: 733 ALDAKTMRRVLDNLSDLQAPWNCPHGRPTMRHL--ADLRKL 771 >gi|323448482|gb|EGB04380.1| hypothetical protein AURANDRAFT_55239 [Aureococcus anophagefferens] Length = 784 Score = 246 bits (627), Expect = 1e-62, Method: Composition-based stats. Identities = 87/411 (21%), Positives = 158/411 (38%), Gaps = 24/411 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L I++IAAGE++ RP A+KE+ EN++DA + + +A GG +++D+G G Sbjct: 47 IVPLDRATIDRIAAGEVVARPGNALKEMFENAIDAGARTIAVSVAEGGVKLLRVSDDGSG 106 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++ + RH TSK+ +D +I +FGFRGEAL SI V+ L+++++ + Sbjct: 107 VRKADLKLLCVRHATSKLRTFEDLQSIQSFGFRGEALASISHVAKLSILTKTRDGACAYR 166 Query: 121 IAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 A + + P A GT + V DLF+ +P R + + + + + Sbjct: 167 CAYRDGEPVDGPTPCAGADGTTITVEDLFYNMPTRRRAMAASAADQYHFVSRVCGAYAVH 226 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIG------EDFINNAVELNEKSNEITL 233 + + + G+ I V G +F ++ Sbjct: 227 YAGRGVSVSCRKAHGACDVNVAGGDTLAAIRAVHGAVADDVREFSCARKPGDDPDVCTQD 286 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTI-------RTAYAETIPLGR-YPVVV 285 G A +F+N R V+ + A G+ P Sbjct: 287 DGG----EHACEFARF-TLFVNDRLVESAAFKRMVDEAYAASADAADGLGSRGKAKPFAY 341 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK--KGISTSSVLSKKMIS 343 L +++ VDVNVHP K + F I + I ++K + + + + + +K+ + Sbjct: 342 LAIDVPGHHVDVNVHPTKKEVAFLYEAPILDTIRCHLEKLVAETAHEMRIADLSDRKLTA 401 Query: 344 SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 S + + EK+ + R D S Sbjct: 402 SPKRRKTSGGSQSSPSRGSLQRPEKMIRTDPRDQRMDAFFSPSQRKRAPPP 452 >gi|317027466|ref|XP_001399369.2| DNA mismatch repair protein (Pms1) [Aspergillus niger CBS 513.88] Length = 1055 Score = 246 bits (627), Expect = 1e-62, Method: Composition-based stats. Identities = 89/406 (21%), Positives = 161/406 (39%), Gaps = 32/406 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + I+QI +G++I KEL+ENSLDA ++ +E G ++ DNG Sbjct: 5 TIKAIEARSIHQIQSGQVIVDLCSVAKELVENSLDAGATSIEIRFKNNGLDLIEVQDNGS 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G++ + +H TSK+S +D + +HTFGFRGEAL S+ A+S + + Sbjct: 65 GISPDNYANVALKHYTSKLSSYEDLTTLHTFGFRGEALSSLCALSDFRITTAQANQAPKA 124 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ K+ + VA GT V +F +P R K+ + E + +++ A Sbjct: 125 TRLDFEPSGKLKKTQIVAGQKGTTASVESIFKGLPVRRRELEKNIKREYGKVLNLLHAYA 184 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNF--PERISQVIGEDF----------------- 217 V F+ + STNGN E I+ V G Sbjct: 185 CVSTGVRFSVRNSVGKTKNVVVFSTNGNQTTKENIANVYGAKTLLALIPLDLALEFEPSA 244 Query: 218 -INNAVELNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAE 274 + + + N++T++G+ P F R ++ F+N R I Y Sbjct: 245 AAGRRITGSGELNKLTVRGHVSKPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYKS 304 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 + + P V +D DVNV P K I + + + + ++++ + S+ Sbjct: 305 F-NVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIDSL----KESLVQLFESSD 359 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTND 380 + + ++ K L T + + + +D Sbjct: 360 QTVPQSLVVGSKPAPTLKQRLGSLQTQTQSPNRPAVEDADSSAADD 405 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 50/313 (15%), Positives = 109/313 (34%), Gaps = 38/313 (12%) Query: 305 YIRFRNPTIIRNFIIQSI-QKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLT 363 + ++ I ++ + A+ + + K + + + + + Sbjct: 701 EKKRHEEAEVQRLIQEAEDRAALPQGNNIHRANKMNKGAAHRDSTVQLMSTIDGSLSKIR 760 Query: 364 NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-----EATHYQLGIACAQIHQNYI 418 + +L R + + + + EE + Q + +I Sbjct: 761 SQLGQLQESLRRWEEHHGPSQSEDETAAPQETAEERLSLTVSKDDFANMRIVGQFNLGFI 820 Query: 419 ISQT------------TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 ++ D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL Sbjct: 821 LATRSSTDDSGPGSSAKDELFIIDQHASDEKFNFERLQ---AETVVQNQRLVQPKRLDLT 877 Query: 467 EGECALIMEHDEDLHRLGIKAE-------RFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 E +++E+ L + G E G + +P + L ++I Sbjct: 878 AVEEEIVIENQAALEKNGFIVEVDESGDEPIGRRCKLV-SLPLSKEVVFGVRDLEELIVL 936 Query: 520 IIDSSTTY---------TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 + ++ T ++ + A AC SI G+ + +M ++++ M Sbjct: 937 LSETPTNAARSATGMYIPRPSKVRKMFAMRACRSSIMIGKTLTVKQMQKVVQNMGTIDKP 996 Query: 571 SQCNHGRPTFIKL 583 C HGRPT L Sbjct: 997 WNCPHGRPTMRHL 1009 >gi|149001722|ref|ZP_01826695.1| DNA mismatch repair protein [Streptococcus pneumoniae SP14-BS69] gi|147760180|gb|EDK67169.1| DNA mismatch repair protein [Streptococcus pneumoniae SP14-BS69] Length = 454 Score = 246 bits (627), Expect = 1e-62, Method: Composition-based stats. Identities = 96/437 (21%), Positives = 188/437 (43%), Gaps = 43/437 (9%) Query: 200 STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTV 259 + G + I+ + G +E+ + + G+ +P R N N +FINGR + Sbjct: 5 AGTGQLRQAIAGIYGLVSAKKMIEIENSDLDFEISGFVSLPELTRANRNYISLFINGRYI 64 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 ++ + I + + +GR+P+ V+ + IDP DVNVHP K +R + + Sbjct: 65 KNFLLNRAILDGFGSKLMVGRFPLAVIHIHIDPYLADVNVHPTKQEVRISKEKELMTLVS 124 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP---------KYATSLTNTQE--- 367 ++I ++ ++ + ++ + + +++ +T LP K S + E Sbjct: 125 EAIANSLKEQTLIPDALENLAKSTVRNREKVEQTILPLKENTLYYEKTEPSRPSQTEVAD 184 Query: 368 ---------------------------KLFLQENRLSTNDLLPSDDPTYSEDN---DPVE 397 KL E + + D L + + + D +E Sbjct: 185 YQVELTDEGQDLTLFAKETLDRLTKPAKLHFAERKPANYDQLDHPELDLASIDKAYDKLE 244 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 EA+ + Q+H Y+ +Q DGL I+DQHAA ER+ +E+ R+ + + Q L Sbjct: 245 REEASSFPELEFFGQMHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIGNVDQSQQQL 304 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P I + + + E L +G+ +G N +RE P ++++ I + ++ Sbjct: 305 LVPYIFEFPADDVLRLKERMPLLEEVGVFLAEYGENQFILREHPIWMAEEEIESGIYEMC 364 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 D ++ + +++ + M+C SI++ ++ +LL ++ + N C HGR Sbjct: 365 DMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCDNPYNCPHGR 423 Query: 578 PTFIKLKLSDIEKLFGR 594 P + SD+EK+F R Sbjct: 424 PVLVHFTKSDMEKMFRR 440 >gi|39979139|emb|CAE85513.1| related to DNA mismatch repair protein PMS1 [Neurospora crassa] Length = 1157 Score = 246 bits (627), Expect = 1e-62, Method: Composition-based stats. Identities = 96/430 (22%), Positives = 170/430 (39%), Gaps = 34/430 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + I+QI +G++I KEL+EN+LDA ++ ++ G ++ DNG G Sbjct: 7 IKAIDPSTIHQIQSGQVIVDLCSVAKELVENALDAGATTIDVRFKNQGLDSIEVQDNGSG 66 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRP-PQNNTGA 119 ++S +H TSK+S DD S + TFGFRGEAL S+ A+SH T+++ + Sbjct: 67 ISSSNYESIALKHYTSKLSNYDDLSTLQTFGFRGEALSSLCALSHFTIVTCTQKEAPKAT 126 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAI 177 ++ K+ S V+ GT V V +LF ++P R ++ + E + +++ + A Sbjct: 127 KLEFETSGKLKSTSVVSGQRGTTVSVENLFKSLPVRRRELERNIKREWGKVVNLLNQYAC 186 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAV------------- 222 V FT S + +M ST GN E I V G + + Sbjct: 187 IQTSVKFTVSQQPTKGKRMVLFSTKGNPTTRENIINVFGIKTMTALIAMDLRLQLKPTNT 246 Query: 223 --------ELNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAY 272 + ++ E+ + G+ P R ++ ++NGR Y Sbjct: 247 GLLAKMTAQDDDAMTEVRICGHISRPAHGEGRQTPDRQMFYVNGRPCGLPQFAKVFNEVY 306 Query: 273 AETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSI--QKAINKKG 330 + P + +++D DVNV P K I + + + + +S+ + Sbjct: 307 RSYNST-QSPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQMLDNLRESLIELFELQDVT 365 Query: 331 ISTSSVLSKKMISSFHQDNAPKTHL-PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 I S K + P L P + E+ + + T Sbjct: 366 IPVSHTQLLKGSTFRGPSTVPLGSLTPAREKDSRDASEEPGSSLPSNRPENGPQGNRATR 425 Query: 390 SEDNDPVEES 399 N+ +E+ Sbjct: 426 HAVNEDSDEA 435 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 28/258 (10%) Query: 351 PKTHLPKYATSLTNTQEKLFLQEN--------------RLSTNDLLPSDDPTYSEDNDPV 396 HLP+ T+ ++TQE + ++S +D + Sbjct: 839 WAKHLPRAGTASSSTQESSDGKPTIGLDAADAEEKLSLKISKSDFAKMKIVGQFNLGFII 898 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 EA+ +Q D L I+DQHA+ E+ FE+++ + SQ Sbjct: 899 AVREASSSHSLEHSPSQQSPAATTQEDDELFIIDQHASDEKYNFERLQSTTT---VQSQR 955 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGI--KAERFGPNAI----AIREIPAILSKKNIP 510 L+ P+ + L E +I+EH L G + + G +A+ + +P Sbjct: 956 LVQPKPLTLTAVEEEIILEHLPALAANGFQVRVDTSGESAVGSRCQLLSLPLSRETTFGV 1015 Query: 511 QLLRDIIDEIIDSSTTY-----TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 L ++I + D+ T+ ++ + A AC SI GR + +M +++R M Sbjct: 1016 ADLEELIFLLGDNPTSSATTAIPRPSKVRKMFAMRACRSSIMIGRALSRPQMEKVVRHMG 1075 Query: 566 KNPNSSQCNHGRPTFIKL 583 + C HGRPT L Sbjct: 1076 EMEKPWNCPHGRPTMRHL 1093 >gi|220678859|emb|CAX13350.1| mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Danio rerio] Length = 215 Score = 245 bits (626), Expect = 1e-62, Method: Composition-based stats. Identities = 74/201 (36%), Positives = 114/201 (56%), Gaps = 3/201 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGEII+RP+ AIKE++EN LDA+S+ ++ + GG I DNG G Sbjct: 6 IRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKSTNIQITVKEGGLKLILIQDNGTG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ + +R TSK+ +D S+I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 66 IRKDDMEIVCERFTTSKLQSFEDLSSIATYGFRGEALASISHVAHVTITTKTADAKCAYR 125 Query: 121 -IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 G+ S +P A N GT++ V DLF+ + R LKS E + I +V+ R AI Sbjct: 126 ANYCDGKLKSPPKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIVEVVSRYAIHN 185 Query: 180 PKVSFTFSTIKSNRYKMNFQS 200 SF+ + Sbjct: 186 SGKSFSVKKQGEMVADVKTLP 206 >gi|3193291|gb|AAC19275.1| T14P8.6 [Arabidopsis thaliana] gi|7269006|emb|CAB80739.1| AT4g02460 [Arabidopsis thaliana] Length = 779 Score = 245 bits (625), Expect = 2e-62, Method: Composition-based stats. Identities = 96/375 (25%), Positives = 168/375 (44%), Gaps = 37/375 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR ++ +I++I +G++I S A+KEL+ENSLDA ++ +E + G+ +FQ+ DNG G Sbjct: 17 IRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGEDYFQVIDNGCG 76 Query: 63 MTSEEIPMAVQ-----------RHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLM 109 ++ + VQ +H TSK+ D D N+ T+GFRGEAL S+ A+ +LT+ Sbjct: 77 ISPTNFKVCVQILRRTFDVLALKHHTSKLEDFTDLLNLTTYGFRGEALSSLCALGNLTVE 136 Query: 110 SRPPQNNTGAQIAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNL 167 +R + +++ + A GT V VR LF +P R F ++ + E Sbjct: 137 TRTKNEPVATLLTFDHSGLLTAEKKTARQIGTTVTVRKLFSNLPVRSKEFKRNIRKEYGK 196 Query: 168 ITDVIRRMAIAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN 225 + ++ A+ V F S K+ + + G+ + I V G + Sbjct: 197 LVSLLNAYALIAKGVRFVCSNTTGKNPKSVVLNTQGRGSLKDNIITVFGISTFTSL---- 252 Query: 226 EKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVV 285 P R A++ Y FINGR V + + Y +T +YPV + Sbjct: 253 -------------QPGTGRNLADRQYFFINGRPVDMPKVSKLVNELYKDT-SSRKYPVTI 298 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF 345 L + D+NV P K + F + T + + + + + + S ++++ +S Sbjct: 299 LDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSSN--ASYIVNRFEENSE 356 Query: 346 HQDNAPKTHLPKYAT 360 D A + K + Sbjct: 357 QPDKAGVSSFQKKSN 371 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 113/290 (38%), Gaps = 23/290 (7%) Query: 311 PTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLF 370 + + F+ +K N I + + + + SS+ + K+ A + E Sbjct: 468 QSTLNTFVTMGKRKHENISTILSETPVLRNQTSSYRVE---KSKFEVRALASRCLVEGDQ 524 Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 L + +S D+ PS+ + + + Q + +II++ L IVD Sbjct: 525 LDDMVISKEDMTPSERDSELGNRISPGTQADNVERHERVLGQFNLGFIIAKLERDLFIVD 584 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAA E+ FE + ST + Q LL P ++L E ++ H + + G E Sbjct: 585 QHAADEKFNFEHL---ARSTVLNQQPLLQPLNLELSPEEEVTVLMHMDIIRENGFLLEEN 641 Query: 491 G----PNAIAIREIPAILSKKNIPQLLRDIIDEIIDS-------------STTYTLQDRI 533 +R IP + + L+D+I + D+ T R+ Sbjct: 642 PSAPPGKHFRLRAIPYSKNITFGVEDLKDLISTLGDNHGECSVASSYKTSKTDSICPSRV 701 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 +LA+ AC S+ G ++ EM +++ + + C HGRPT L Sbjct: 702 RAMLASRACRSSVMIGDPLRKNEMQKIVEHLADLESPWNCPHGRPTMRHL 751 >gi|111380661|gb|ABH09707.1| PMS1-like protein [Penicillium marneffei] Length = 1403 Score = 245 bits (625), Expect = 2e-62, Method: Composition-based stats. Identities = 90/440 (20%), Positives = 169/440 (38%), Gaps = 27/440 (6%) Query: 11 INQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 ++QI +G++I +KEL+ENSLDA ++ +E G ++ DNG G+ + Sbjct: 404 VHQIQSGQVIVDLCSVVKELVENSLDAGATSIEVRFKNDGLDSIEVQDNGSGIDPQNYES 463 Query: 71 AVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPP-QNNTGAQIAISGE- 126 +H TSK++ DD +++ TFGFRGEAL S+ AVS+ +++ Q ++ Sbjct: 464 IALKHYTSKLASYDDLTSLTTFGFRGEALSSLCAVSNFHIITAQAHQAPKANKLEFEHSG 523 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIAYPKVSFT 185 K+ + VA GT V + +LF +P R K+ + E + +++ A V F+ Sbjct: 524 KLKGSQIVAGQKGTTVSISNLFSRLPVRRKELEKNIKRELGKVINLLNEYACISTGVRFS 583 Query: 186 FSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKSNE------------- 230 S + ++ +T N + I+ V G + + L + Sbjct: 584 VKNTDSKKRQLVLLTTKANASIRDNIANVYGAKTLLTLIPLELELEFEPSATGKRLNRDL 643 Query: 231 --ITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 I ++GY P RG ++ ++N R I Y + + P V+ Sbjct: 644 NKIHVRGYVSRPVVGEGRGTRDRQMYYVNSRPCGIPQIAKAFNEVYKTY-NISQAPFVLA 702 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISS 344 ++D DVNV P K I + + + +++ + ++ + S K + Sbjct: 703 DFQMDTNAYDVNVSPDKRTILLHDSAALIESLKEALDQMFQDAEQTVPQSQFTINKQQTD 762 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 Q P S T + S + + + + T Sbjct: 763 IQQRLKPSPMRAPLDRSRTEQATPTEESQTDRSEPVQVTHQHAQEDKTAEVADNENITQE 822 Query: 405 QLGIACAQIHQNYIISQTTD 424 I ++ ++ Sbjct: 823 TTDSQVTAISEDAAADESDH 842 Score = 130 bits (327), Expect = 6e-28, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 22/178 (12%) Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I E+ L + Sbjct: 1175 DELFIIDQHASDEKYNFERLQ---AETVVQNQRLVHPKTLDLTAVEEEIIRENKLALEKN 1231 Query: 484 GIKAE-------RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL------- 529 G E G + +P + L ++I + ++ T+ T Sbjct: 1232 GFVIEVDDSGNEPIGRRCKLV-SLPLSKEVVFDIRDLEELIVLLSEAPTSATRNATTSDT 1290 Query: 530 ----QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ + A AC SI G+ + +M + +R M C HGRPT L Sbjct: 1291 YIPRPSKVRKMFAMRACRSSIMIGKTLTVKQMEKAVRNMGTIDKPWNCPHGRPTMRHL 1348 >gi|326508973|dbj|BAJ86879.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 780 Score = 244 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 105/406 (25%), Positives = 187/406 (46%), Gaps = 12/406 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + + +++I +G++I S A+KEL+ENSLDA ++ VE + G+ +F++ DNG G Sbjct: 8 IKPIGKSAVHRICSGQVIFDLSSAVKELVENSLDAGATTVEVGLKAYGEEWFKVADNGSG 67 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ +H TSKISD D +++ TFGFRGEAL S+ A+ LT+ +R G Sbjct: 68 ISPSNFQALALKHHTSKISDFSDLNSVVTFGFRGEALSSLCALGKLTVETRTKDELVGTH 127 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + +SS R +A GT V + LF T+P R F ++ + E + ++ A+ Sbjct: 128 LEFEHSGVVSSERKIARQVGTTVTIEKLFSTLPVRGKEFSRNIKKEYGKVISLLHAYALI 187 Query: 179 YPKVS--FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK-SNEITLQG 235 V T + K+++ + + + + I V G + + N S ++G Sbjct: 188 AKGVRLLCTNTVGKNSKMVVVKTQGSSSLKDNIVTVFGLNTLKCLEPFNLALSEGCQVEG 247 Query: 236 YTGI--PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 + P R + ++ + ++NGR V + + Y + +YP+ VL I Sbjct: 248 FLSKPGPGTGRNSGDRQFFYVNGRPVDMPKVTKLVNELYRSSNSR-QYPLAVLNFCIPTT 306 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 DVNV P K I F + I + ++I+ N + S S + H ++ K Sbjct: 307 SYDVNVAPDKRKIFFSSEDTILLSLREAIESLYNPQQCSFSINHIEDPEKVNHTEDPVKE 366 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 P + +T L +EN S + +D + + P ++ Sbjct: 367 DDPTIDEPIKSTY--LMDKENVSSPENDNCKEDTDSDDQDPPKDQK 410 >gi|121716012|ref|XP_001275615.1| DNA mismatch repair protein (Pms1), putative [Aspergillus clavatus NRRL 1] gi|119403772|gb|EAW14189.1| DNA mismatch repair protein (Pms1), putative [Aspergillus clavatus NRRL 1] Length = 1062 Score = 244 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 90/373 (24%), Positives = 153/373 (41%), Gaps = 27/373 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I +KEL+ENSLDA ++ +E G ++ DNG Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSIEVRFKNNGLDLIEVQDNGA 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G++ E +H TSK+S +D S +HTFGFRGEAL S+ A+S +++ Sbjct: 63 GISPENYENVALKHHTSKLSSFEDLSRLHTFGFRGEALSSLCALSEFRIVTAQANQAPKA 122 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ K+S + VA GT V LF +P R K+ + E + +++ A Sbjct: 123 TKLEFEMSGKLSKTQVVAGQKGTTASVEGLFKRLPVRRRELEKNIKREYTKVLNLLHAYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNF--PERISQVIGEDFINNAVELN--------- 225 V F+ STN N + I+ V G + + L+ Sbjct: 183 CVSTGVRFSVRNTMGKNRNAVVFSTNDNQTTKDNIANVYGAKTLLALIPLDLVLEFEPSA 242 Query: 226 -------EKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 N+I ++G+ P F R ++ F+N R I Y Sbjct: 243 AARRTAGGVPNKILVKGHISRPVFGEGRQTPDRQMFFVNARPCGLPQIAKAFNEVYKSF- 301 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN-KKGISTSS 335 + + P V +D DVNV P K I + + + + QS+ + S Sbjct: 302 NVSQSPFVFADFNMDTNAYDVNVSPDKRTILLHDAGALIDALKQSLTELFETSDQTVPQS 361 Query: 336 VLSKKMISSFHQD 348 ++ + + Q Sbjct: 362 QVAGQRQPAPKQQ 374 Score = 134 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 50/257 (19%), Positives = 101/257 (39%), Gaps = 32/257 (12%) Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 L + + +T Q+ L + P + + + Q Sbjct: 752 SLSRIVSQMTRVQDGLRAYARGADYTEDEREATPAGTAEERLSLTVTKDDFARMRIIGQF 811 Query: 414 HQNYII---------SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 + +I+ S+T D L I+DQHA+ E+ FE+++ T + +Q L+ + +D Sbjct: 812 NLGFILATRSPEGSSSETKDELFIIDQHASDEKFNFERLQ---AETVVQNQRLVQSKRLD 868 Query: 465 LLEGECALIMEHDEDLHRLGIKAE-------RFGPNAIAIREIP----AILSKKNIPQLL 513 L E +++E+ L + G E G + +P + +++ +L+ Sbjct: 869 LTAVEEEIVIENQFALEKNGFVVEVDDSGDEPIGQRCKLV-SLPLSKEVVFGMRDLEELI 927 Query: 514 RDIIDEIIDSSTTYT-------LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 ++ E+ +++ + ++ + A AC SI G+ + +M R++R M Sbjct: 928 V-LLSEMPATTSARSAAPSNIPRPSKVRKMFAMRACRSSIMIGKNLTQKQMVRVVRNMGT 986 Query: 567 NPNSSQCNHGRPTFIKL 583 C HGRPT L Sbjct: 987 IDKPWNCPHGRPTMRHL 1003 >gi|297264532|ref|XP_001103074.2| PREDICTED: PMS1 protein homolog 1 [Macaca mulatta] Length = 770 Score = 244 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 102/460 (22%), Positives = 192/460 (41%), Gaps = 37/460 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P + F K+ ++ ++ + + V+G +NN + + + ++I L G Sbjct: 182 LKPDLRIVFVHNKAVIWQ---KTRVSDHKMALMSVLGTAVMNNMESFQYHCEESQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YP+ L Sbjct: 239 FLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPIFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSV 336 +++ VDVN+ P KS + +N + + + N+ +S + + Sbjct: 299 IDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNETDVSAADI 358 Query: 337 LSKKMISS---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTY 389 + K + F++ + + TS+ Q + E+ +T+D L D Y Sbjct: 359 VLSKTAETDVLFNKMESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISAGDFGY 418 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + ++ + + ++ +QT Sbjct: 419 GHCSSEISNTDKNTKNAFQDISMSNLSWENTQTEYSKTCF 458 >gi|326480755|gb|EGE04765.1| DNA mismatch repair protein mutL [Trichophyton equinum CBS 127.97] Length = 725 Score = 244 bits (624), Expect = 2e-62, Method: Composition-based stats. Identities = 82/231 (35%), Positives = 125/231 (54%), Gaps = 11/231 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L +IN+IAAGEII P A+KELIENS+DA S+ VE ++ GG QITDNG Sbjct: 49 KIQALDPDVINKIAAGEIIVAPMHALKELIENSVDAGSTSVEILVREGGLKLLQITDNGH 108 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSK+ +D S+I T+GFRGEAL SI V+HLT+ ++ ++ Sbjct: 109 GIDHDDLSILCERFTTSKLQAFEDLSSIATYGFRGEALASISHVAHLTVTTKTAGSSCAW 168 Query: 120 QIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + S K+ +P+A GT + V DLF+ +P R +S E + D+ Sbjct: 169 RAHYSDGKLVPAKPGQNASPKPIAGRKGTQITVEDLFYNVPTRRRAFRSASEEYAKVLDI 228 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV 222 + R A+ +F+ ++ S N + +RI Q+ G N V Sbjct: 229 VGRYAVHCSGTAFSCKKHGEAGVSLST-SINSSIVDRIRQLHGGAVANELV 278 >gi|289618387|emb|CBI55111.1| unnamed protein product [Sordaria macrospora] Length = 1251 Score = 244 bits (624), Expect = 3e-62, Method: Composition-based stats. Identities = 91/429 (21%), Positives = 177/429 (41%), Gaps = 33/429 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + I+QI +G++I KEL+EN+LDA ++ V+ G ++ DNG G Sbjct: 7 IKAIDPSTIHQIQSGQVIVDLCSVAKELVENALDAGATTVDVRFKNQGLDSIEVQDNGSG 66 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRP-PQNNTGA 119 ++S +H TSK++ DD SN+ TFGFRGEAL S+ A+SH T+++ + Sbjct: 67 ISSSNYESIALKHYTSKLATYDDLSNLQTFGFRGEALSSLCALSHFTIVTCTQKEAPKAT 126 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAI 177 ++ K+ S V+ GT V V +LF ++P R ++ + E + +++ + A Sbjct: 127 KLEFETSGKLKSTTVVSGQRGTTVSVENLFKSLPVRRRELERNIKREWGKVVNLLNQYAC 186 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAV------------- 222 V FT S + +M ST GN E I V G + + Sbjct: 187 IQTGVKFTVSQQPTKGKRMVLFSTKGNPTTRENIINVFGVKTMTALIAMDLRLQLKPTTT 246 Query: 223 ----------ELNEKSNEITLQGYTGIPTFN--RGNANQFYVFINGRTVQDKFILSTIRT 270 + + + E+ + G+ P R ++ ++NGR Sbjct: 247 TGLLNKAPAAQDEDTTTEVRICGHISRPAHGEGRQTPDRQMFYVNGRPCGLPQFAKVFNE 306 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 Y + P + +++D DVNV P K + + + + + +S+ + + Sbjct: 307 VYRSYNST-QSPFIFADIQLDTHLYDVNVSPDKRTVLLHDQGQMLDNLRESLIELFELQD 365 Query: 331 ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYS 390 ++ + + SS + + ++++ ++ L ++ + + Sbjct: 366 VTIPVSHIQPLKSSTFRGPSTAPSGSLTQARRRDSRDASEEPDSPLPSDTPGNGPEGGRT 425 Query: 391 EDNDPVEES 399 + E+S Sbjct: 426 TRSTINEDS 434 >gi|70950630|ref|XP_744622.1| mismatch repair protein [Plasmodium chabaudi chabaudi] gi|56524651|emb|CAH78788.1| mismatch repair protein pms1 homologue, putative [Plasmodium chabaudi chabaudi] Length = 1094 Score = 244 bits (623), Expect = 3e-62, Method: Composition-based stats. Identities = 81/329 (24%), Positives = 154/329 (46%), Gaps = 10/329 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI+ + ++ I+ I + ++I S +KEL+ENS+DA ++ ++ + G +++DNG Sbjct: 1 MKIKSIGDESIHNICSSQVIFTLSNVVKELVENSIDAGATEIKVKLVENGIKLIEVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI-HTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+ RH TSKIS DD N+ T GFRGEAL S+ +S L + ++ + Sbjct: 61 NGIKKINFENVCARHATSKISEFDDIHNVLDTLGFRGEALNSLCMLSDLYISTKHDEFEH 120 Query: 118 GAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRM 175 G + K+ P+A GT V ++F IP R +K+ + + + + ++++ Sbjct: 121 GYLLKFDKFGKLLHEEPIARLRGTTVSCENIFKNIPIRKKDLIKNIKNQLSDLLSLMQQY 180 Query: 176 AIAYPKVSFTFSTI-----KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE 230 AI Y ++ F I + M + + + + + G+ I N ++LN K+ Sbjct: 181 AIIYHEIKFMIFNIVTQKGSTKNMNMLITNGSDDIKKNFYSIFGKKTIGNLIDLNIKNEN 240 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 ++GY R + + + ++N R + ++ I YP+++ + Sbjct: 241 WLVKGYISDSNSGRRDKDLQFYYMNSRPIHVIKNVNKIINTIYREFNSRLYPIIICNIIS 300 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 D + +D+NV P K + F + I Sbjct: 301 DAKNIDINVTPDKREVFFTFENELCEQIK 329 Score = 97.0 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 71/225 (31%), Gaps = 62/225 (27%) Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 YI + L I+DQHAA E+ FEK + F + SQ L+ ++L + +I Sbjct: 811 NEYIERKNNYALFIIDQHAADEKSNFEKYNKIFT---MKSQKLINKIELELSPAQIHIIE 867 Query: 475 EHDEDLHRLGIKAERFGPN--------------------------------AIAIREIPA 502 ++ R G + E + + +P Sbjct: 868 KNLVIFLRNGFEIEIVEEPINKKRKINKDVHVGNFENAENDIPDEETLVQIKVYLLSLPV 927 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYT---------------------------LQDRIEN 535 K ++ + + + ++ Sbjct: 928 FNGKILEVVDFMSLLYHLNNHPIIFDKGIDDSFLKDKSKLTENTGTWFNYNFPRPQKVWR 987 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 ILA+ AC ++ G+ + EM + +++ N C HGRPT Sbjct: 988 ILASKACRNAVMVGKPLNISEMITIKKKLSVLQNPWNCPHGRPTI 1032 >gi|321476952|gb|EFX87911.1| putative PMS1, postmeiotic segregation increased 2 protein [Daphnia pulex] Length = 814 Score = 244 bits (623), Expect = 3e-62, Method: Composition-based stats. Identities = 91/459 (19%), Positives = 183/459 (39%), Gaps = 39/459 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + +++I +G+++ ++A+KEL+ENSLD+ ++ VE + G ++ D+G G Sbjct: 10 IKPIDHSTVHRICSGQVVLTLAVAVKELVENSLDSGATAVEVRLKEFGSDSVEVIDDGSG 69 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ +H TSKI +D N+ TFGFRGEAL S+ A+S L++ + + G + Sbjct: 70 ISPSNFENLCLKHYTSKIEEFEDLLNVQTFGFRGEALSSLCALSALSVTTCEKGSKIGWK 129 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + K+ + PGT V + +LF T+P R F+K+ + E +T+++ + Sbjct: 130 LEYDSHGKLVKQTQCSRQPGTSVSLLNLFSTLPVRHKEFIKNLRREFAKMTNMLTGYCLI 189 Query: 179 YPKVSFTFST-IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS--------- 228 K T + + + + + V G+ N +E+ Sbjct: 190 SKKTRITCTNSTGGRTSTVLSTRGGAHLKDNFTLVFGQKSWQNMLEIKATQPSEDILAEF 249 Query: 229 -------------NEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 +G+ R A++ Y FINGR + + Y Sbjct: 250 NLNANILPDKLNEWPFQFEGFVSSCAHGTGRSCADRQYYFINGRPCDPAKVSKLVNEVYH 309 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 +YP +VL + ++D+NV P K + N ++ +++ ++N+ Sbjct: 310 SY-NRNQYPSIVLNITTHSSEIDINVTPDKRQLMVANEK----ILLATVKASLNEIYREI 364 Query: 334 SSVLSKKMISSFHQDNA-----PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 S + S ++ A P T + +SL + + S + D + Sbjct: 365 PCTFSLQNNSLLNKSPAVLTESPGTPSQRLRSSLAAFAAAGWKPSSPCSPGEKRKLDSCS 424 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLV 427 + +++ ++ + +Q D Sbjct: 425 PALKQKRLDDFVTIPISPSEKKTKLDVSIQDTQHADTKW 463 Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 21/204 (10%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + + ++ Q + +II++ L I+DQHAA E+ FE +++ T+I Q L Sbjct: 607 QISQSDFEKMEVVGQFNLGFIIARLNSDLFIIDQHAADEKYNFETLQRT---TRIQPQKL 663 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPA----ILSKKNI 509 + P+ ++L +L++++ E G + + + +P +L +I Sbjct: 664 VCPKPLNLTAANESLLIDNMELFRSNGFDFVVNKDEDPTKRVLLSAVPLSGNWLLGPSDI 723 Query: 510 PQLLRDIIDEIIDSSTTYT----------LQDRIENILATMACYGSIRSGRKMQSIEMNR 559 +LL + D ++ + R+ + A+ AC ++ G + S++M Sbjct: 724 DELLFMLQDSPMNEEEDRSNVSQASLARYRPSRVRAMFASRACRKAVMVGDPLTSVQMTN 783 Query: 560 LLREMEKNPNSSQCNHGRPTFIKL 583 LLR+M C HGRPT L Sbjct: 784 LLRQMSNLKQPWNCPHGRPTMRHL 807 >gi|270003668|gb|EFA00116.1| hypothetical protein TcasGA2_TC002932 [Tribolium castaneum] Length = 807 Score = 244 bits (623), Expect = 3e-62, Method: Composition-based stats. Identities = 105/564 (18%), Positives = 212/564 (37%), Gaps = 33/564 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ ++ +++I +G+++ +IA+KEL+EN++DA ++ ++ + G +++DNG G Sbjct: 8 IQPINRDTVHRICSGQVVLSLAIAVKELVENAIDAGATIIDIQLKEYGSEIIEVSDNGSG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI DD N+ T GFRGEAL S+ A+S L+++++ + Sbjct: 68 VLKENFQALTLKHYTSKIKQFDDLENLSTLGFRGEALSSLCALSDLSIVTKHTSAENATK 127 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAIA 178 I KI S A GT V + +LF T+P R K+ + E N + ++ + Sbjct: 128 ITYDRSGKIISETVSARESGTTVTLENLFSTLPVRRREFTKNLKREFNKMCQLLYAYCLV 187 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE---------- 226 + F+ + K ++ + + I+ V G + + +E+ Sbjct: 188 SKGIKFSCTNTTSKGSKNTVVATEGLNMVKDNITNVFGPKQLPSLIEVEMVRPDETILAE 247 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 T + + G + ++ + +IN R + + Y + Sbjct: 248 YGIKLTEGDPLPFTFEFFISSVMHGSGRSTNDRQFFYINSRPCDPSKVARLVNEIYKQY- 306 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 +YP V L + VDVNV P K + ++ + I S+ +A + Sbjct: 307 NNNQYPFVYLNITSKSSLVDVNVTPDKRQVFLEKEKVLLSTIKASLIEAFKMFPSTYKMQ 366 Query: 337 LSKKMISSFHQDNAPKTHLPKY--ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 ++ +D + S+T ++ K R +D + N Sbjct: 367 NLDLTQNTTIKDFFKDSDCSPRGLKRSVTESELKKGSTLERFKKRSKTENDKDLLASPNH 426 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 E + D +A E E+ + +T I + Sbjct: 427 SSSLKEKRKVDNNSQLDTFIKIASEIIARDKREEKSFNALCEEEDIEETKTVCTNTFIKT 486 Query: 455 QTLLT---PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + + + E + + ++ + + A I IP +++ + Sbjct: 487 TSQIIAKDDCGTNKSEEKSLNTLCEEDIIEEIKTVCSSTTKEAENIVTIPKTINECEDKE 546 Query: 512 LLRDIIDEIIDSSTTYTLQDRIEN 535 + +EI + + L +RIE Sbjct: 547 EIEKT-NEIKITKSPSQLDNRIEE 569 Score = 160 bits (405), Expect = 6e-37, Method: Composition-based stats. Identities = 65/315 (20%), Positives = 120/315 (38%), Gaps = 19/315 (6%) Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 I N KS II + I T + + Sbjct: 491 IAKDDCGTNKSEEKSLNTLCEEDIIEEIKTVCSSTTKEAENIVTIPKTINECEDKEEIEK 550 Query: 350 APKTHLPKYATSLTNTQEKLFLQENR------------LSTNDLLPSDDPTYSEDNDPVE 397 + + K + L N E+ +++ S + D + + Sbjct: 551 TNEIKITKSPSQLDNRIEEKKEKKDSGEEPTKNESKFEKSVAEDKLLQDAPLKSQEELRK 610 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + Q + +II++ + L I+DQHA E+ FE+++ ST + +Q L Sbjct: 611 HISKEDFANMDVIGQFNLGFIITKLKNDLFIIDQHATDEKYNFEQLQ---ASTVMENQVL 667 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGI--KAERFGPNA--IAIREIPAILSKKNIPQLL 513 + P+ + L G +L++E+++ ++ G K + P +++ IP S Q + Sbjct: 668 VNPKPLQLTAGNESLLIENEDIFNKNGFTFKIDESAPCTQKVSLTSIPLSKSMVFGKQDI 727 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 +++ + DS+ T RI + AT AC S+ G+ + +M RL+ M + C Sbjct: 728 EEMLFMLQDSNHTMCRPSRIRAMFATRACRKSVMIGKPLSKSDMRRLVNHMGEIEQPWNC 787 Query: 574 NHGRPTFIKLKLSDI 588 HGRPT L D+ Sbjct: 788 PHGRPTMRHLINLDL 802 >gi|47216556|emb|CAG04734.1| unnamed protein product [Tetraodon nigroviridis] Length = 816 Score = 244 bits (622), Expect = 4e-62, Method: Composition-based stats. Identities = 94/370 (25%), Positives = 154/370 (41%), Gaps = 77/370 (20%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ A+KELIEN LDA+S+ ++ + GG QI DNG G Sbjct: 5 IRRLDETVVNRIAAGEVIQRPANAVKELIENCLDAKSTNIQVTVKDGGLKLLQIQDNGTG 64 Query: 63 M-TSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGE------------------------ 95 + E++ + +R TSK+ +D S I T+GFRGE Sbjct: 65 IRQKEDMEIVCERFTTSKLQTFEDLSAIATYGFRGEVSFSLCTIKKQILTILVRLFFNPS 124 Query: 96 -----ALPSIGAVSHLTLMSRPPQNNTGAQIAISGEK-ISSVRPVAMNPGTIVEVRDLFF 149 AL SI V+H+T+ ++ + + + K S +P A N GT + Sbjct: 125 HSYLQALASISHVAHVTITTKTADAKCAYRASYTDGKPKSPPKPCAGNQGTQI------- 177 Query: 150 TIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERI 209 + AI F+ + N + + I Sbjct: 178 ----------------------LDEYAIHNSGKGFSVKKQGETLADVRTLP-NASVVDNI 214 Query: 210 SQVIGEDFINNAVELNEKSNE--ITLQGYTGIPTFNRGNANQFYVFING----------- 256 V G +E+ + + ++GY ++ +FIN Sbjct: 215 RGVFGNTVSRELIEIGCEDQKLAFKMKGYISNANYS-VKKCILILFINRTCSWTDSGLLD 273 Query: 257 RTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRN 316 R V+ + I + YA +P +P + L LEI P+ +DVNVHP K + F + + Sbjct: 274 RLVESSALKKAIESVYAAYLPKNTHPFLYLSLEIAPQNIDVNVHPTKHEVHFLHEDSVIE 333 Query: 317 FIIQSIQKAI 326 + + I+ + Sbjct: 334 NVQKHIESKL 343 >gi|289804550|ref|ZP_06535179.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 149 Score = 244 bits (622), Expect = 4e-62, Method: Composition-based stats. Identities = 70/149 (46%), Positives = 94/149 (63%), Gaps = 3/149 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++RV+ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ EE+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQAEA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRD 146 Q G + +V+P A GT +EV D Sbjct: 121 WQAYAEGRDMDVTVKPAAHPVGTTLEVLD 149 >gi|320169208|gb|EFW46107.1| Pms2-PA [Capsaspora owczarzaki ATCC 30864] Length = 975 Score = 244 bits (622), Expect = 4e-62, Method: Composition-based stats. Identities = 88/442 (19%), Positives = 173/442 (39%), Gaps = 33/442 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + + +++I +G++I + A+KEL+ENS+DA ++ +E + G ++ DNG G Sbjct: 126 IKPIDARSVHRICSGQVILSLATAVKELVENSIDAGATAIEIRLREHGAELIEVIDNGSG 185 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++ TSK++D D + + TFGFRGEAL S+ A++ +++ + + G + Sbjct: 186 IEPHNFQALTLKYHTSKLADFSDLTRLETFGFRGEALSSLCALAEVSVTTCSAAHAVGTR 245 Query: 121 IAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + E I++ P GT + VR++F ++P R +K+ + E + +++ I Sbjct: 246 LEFDTEGLITTKSPCPREQGTTISVRNIFASLPVRYRELMKNLKREYGKLIAMLQAYCIV 305 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE---------- 226 V + S K+ R + + ++ + G + + Sbjct: 306 ATGVRISCSNQIGKTPRSMVFASPGAETMKDNVTAIFGIKQTQQLMPFVQLSSSELTAAL 365 Query: 227 ----------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAE 274 + G P G + ++ ++NGR + Y Sbjct: 366 ATTDAGSSQVIFPTFKITGLISKPMAGCGRSSTDRQCFYVNGRPCDMPKLSKVANEIYHS 425 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 I G +P + L L + +DVNV P K I + ++ + + ++ + Sbjct: 426 FIA-GSFPALFLNLALPSAAIDVNVTPDKRTILLHDEKE----LVLAFKTCLSAISFARV 480 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 V + S T P T + + RLST +L T+S + Sbjct: 481 DVAHPTISRSSSLAPPAVTKTPTLINHRTVSGLSMSQLSARLSTEPVLLGRRSTFSNSSA 540 Query: 395 PVEESEATHYQLGIACAQIHQN 416 + A I Q Sbjct: 541 SLVPPTRPLSSFSARHASIGQP 562 Score = 98.2 bits (243), Expect = 4e-18, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 78/205 (38%), Gaps = 7/205 (3%) Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 +++ + +N S + + T + Q ++ Sbjct: 761 DSESAVDAKVSEEGAGDNSPRKFRTKISPQSEQAAVAELARSIFKTDFAKMKVLGQFNRG 820 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 +II++ L +VDQHA E+ +EK++ S ++ SQ L+ P + L ++M++ Sbjct: 821 FIIAKLDKDLFLVDQHATDEKYNYEKLQ---ESVRLQSQPLIRPMPLQLTAANEVVLMDN 877 Query: 477 DEDLHRLGIKA----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + G + + +P P + +++ + DS R Sbjct: 878 IDIFRMNGFDFVVDESAPATERVRLSAMPFSKKTTFGPSDVDELLYRLSDSPGVMCRPSR 937 Query: 533 IENILATMACYGSIRSGRKMQSIEM 557 + ++LA+ AC S+ G + + ++ Sbjct: 938 VASMLASRACRKSVMIGDPLSTSQI 962 >gi|302806844|ref|XP_002985153.1| hypothetical protein SELMODRAFT_121896 [Selaginella moellendorffii] gi|300146981|gb|EFJ13647.1| hypothetical protein SELMODRAFT_121896 [Selaginella moellendorffii] Length = 722 Score = 244 bits (622), Expect = 4e-62, Method: Composition-based stats. Identities = 81/337 (24%), Positives = 163/337 (48%), Gaps = 18/337 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I + + I++I +G++I + A+KEL+ENSLDA ++ +E + G +++DNG Sbjct: 10 PIHPIDKASIHRICSGQVILDLATAVKELVENSLDAGATSIEVKLKEHGGDAIEVSDNGS 69 Query: 62 GMTSE---------EIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMS 110 G++S+ ++ ++ TSK+SD D ++ +FGFRGEAL S+ +++ +++++ Sbjct: 70 GVSSDNYQVFFLSLDLFGLTLKYHTSKLSDFSDLQSLTSFGFRGEALSSLCSLADVSILT 129 Query: 111 RPPQNNTGAQI-AISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLI 168 R ++ TG +I I S A GT V V LF +P R FL++ + E + + Sbjct: 130 RTKEDETGTRISYNRAGLIVSKETAARQVGTTVTVSKLFSPLPVRHKEFLRNVRREYSRM 189 Query: 169 TDVIRRMAIAYPKVSFTFSTI-KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK 227 +++ A+ V + + + ++ G+ E I + G + ++ Sbjct: 190 IAILQAYALISKNVRLVCTNLVGKSSRSTILRTQGGSVRENIVTIFGPKTMACLDPMDIS 249 Query: 228 -SNEITLQGYTGIP--TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 +++++G+ P RG++++ + F+NGR V + Y +YP+ Sbjct: 250 LPEDLSIEGFVSKPGSGSGRGSSDRQFFFVNGRPVDLPKFSKLLNELYKSFNSQ-QYPMA 308 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 VL + DVNV P K + + + + + + Sbjct: 309 VLNFRLPTTAYDVNVTPDKRKLFLHSESSFMDGLRNA 345 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 53/242 (21%), Positives = 94/242 (38%), Gaps = 13/242 (5%) Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 P A E ++ + + +D E+ + + Q + Sbjct: 476 TPPNAFPKEKNFETARQADHSSNPQNGSATDGEALGEECGGLLSEAPLLKKCAKIIGQFN 535 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +II++ L I+DQHA+ E+ FE++ ST + Q LL P + L E +I Sbjct: 536 LGFIIARLDSDLFIIDQHASDEKYNFERL---SKSTVLNRQPLLRPMPLHLSSAEEIIIS 592 Query: 475 EHDEDLHRLGIKAERFGP----NAIAIREIP----AILSKKNIPQLLRDIIDEIIDSSTT 526 H E + G I + +P ++ +L+ + ++ SS+ Sbjct: 593 THMEVFRQNGFDFTEQEDAPPGQRILLSAVPFSKNVTFGVSDVQELVSLLSEDYGSSSSH 652 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 R+ ++LA+ AC SI G + EM +++R + C HGRPT L Sbjct: 653 LVQPSRVRSMLASRACRSSIMIGDALSKKEMEKVVRHLADLDAPWNCPHGRPTMRHL--Y 710 Query: 587 DI 588 D+ Sbjct: 711 DL 712 >gi|281205683|gb|EFA79872.1| MutL DNA mismatch repair protein [Polysphondylium pallidum PN500] Length = 945 Score = 244 bits (622), Expect = 4e-62, Method: Composition-based stats. Identities = 90/372 (24%), Positives = 166/372 (44%), Gaps = 26/372 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI + ++ ++ I +G++I S+A KEL+ENSLDA ++++E + G+ ++ DNG Sbjct: 55 KIAAIDKESVHLICSGQVIFDLSVATKELVENSLDAGATKIEVRLKEYGEESIEVIDNGS 114 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +H TSKI + D ++ +FGFRGEAL S+ A++ +T+++R T Sbjct: 115 GVEPHNFAALTLKHHTSKIQEFNDLQSVTSFGFRGEALSSLCALADVTIVTRAASAPTAT 174 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLK-SEQVETNLITDVIRRMAI 177 ++ I S VA GT V + F +P R LK + + E + I V++ A+ Sbjct: 175 KLIYDQNGAIVSQTSVAREVGTTVTLTSPFRKMPVRHQELKRNLKREYSKIQLVLQTYAV 234 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQG 235 V S + ST G + + +S V G T++G Sbjct: 235 ISVGVRLVVYHQPSKGPRTPVLSTEGKPSLRDNVSAVFGGKTSAVLDSFAASDETFTVEG 294 Query: 236 YTGI----------------PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG 279 + +R + ++ +V++N R ++ + I Y G Sbjct: 295 LISKVGANGGAGSSVNSASGNSASRNSGDRQFVYLNKRPIEMNTLTKVINGLYQTFCKKG 354 Query: 280 RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNP----TIIRNFIIQSIQKAINKKGISTSS 335 YP++ L + DP DVNV P K + + ++++ + + + A + IS+S+ Sbjct: 355 SYPMIFLNVIADPTTYDVNVTPDKRKVFLQKELQLVNLVKDKLKSTWESAQSSFDISSSN 414 Query: 336 VLSKKMISSFHQ 347 + + S + Sbjct: 415 MNELQTFSVIQK 426 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 12/218 (5%) Query: 373 ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 R +D +D + + E +++ Q ++ +II++ L I+DQH Sbjct: 662 PPRKKKDDTTGYNDSNAQSELTRFFKKE--YFKDMSIIGQFNKGFIITRLGMDLFIIDQH 719 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA---ER 489 AA E+ +E ++ S I+SQ + P +L + ++I++H + G + E Sbjct: 720 AADEKYNYESLQ---KSHVISSQPYIKPISFNLTVDDESIIIDHISIFKKNGFEFQIDEA 776 Query: 490 FGPN-AIAIREIPAILSKKNIPQLLRDIIDEIIDS---STTYTLQDRIENILATMACYGS 545 P + + P + P + ++I I D R+ + A+ AC S Sbjct: 777 APPKYKVKLTAFPHSNKTEFGPDDVYELITLIKDQAMIGLENIRLSRVSAMFASRACRKS 836 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 I G + EM ++L + N C HGRPT L Sbjct: 837 IMVGTSLTVPEMKKILDNLSTLDNPWCCPHGRPTMRHL 874 >gi|91079030|ref|XP_974934.1| PREDICTED: similar to DNA mismatch repair protein pms2 [Tribolium castaneum] Length = 840 Score = 244 bits (622), Expect = 4e-62, Method: Composition-based stats. Identities = 105/564 (18%), Positives = 212/564 (37%), Gaps = 33/564 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ ++ +++I +G+++ +IA+KEL+EN++DA ++ ++ + G +++DNG G Sbjct: 8 IQPINRDTVHRICSGQVVLSLAIAVKELVENAIDAGATIIDIQLKEYGSEIIEVSDNGSG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI DD N+ T GFRGEAL S+ A+S L+++++ + Sbjct: 68 VLKENFQALTLKHYTSKIKQFDDLENLSTLGFRGEALSSLCALSDLSIVTKHTSAENATK 127 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAIA 178 I KI S A GT V + +LF T+P R K+ + E N + ++ + Sbjct: 128 ITYDRSGKIISETVSARESGTTVTLENLFSTLPVRRREFTKNLKREFNKMCQLLYAYCLV 187 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE---------- 226 + F+ + K ++ + + I+ V G + + +E+ Sbjct: 188 SKGIKFSCTNTTSKGSKNTVVATEGLNMVKDNITNVFGPKQLPSLIEVEMVRPDETILAE 247 Query: 227 --------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 T + + G + ++ + +IN R + + Y + Sbjct: 248 YGIKLTEGDPLPFTFEFFISSVMHGSGRSTNDRQFFYINSRPCDPSKVARLVNEIYKQY- 306 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 +YP V L + VDVNV P K + ++ + I S+ +A + Sbjct: 307 NNNQYPFVYLNITSKSSLVDVNVTPDKRQVFLEKEKVLLSTIKASLIEAFKMFPSTYKMQ 366 Query: 337 LSKKMISSFHQDNAPKTHLPKY--ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 ++ +D + S+T ++ K R +D + N Sbjct: 367 NLDLTQNTTIKDFFKDSDCSPRGLKRSVTESELKKGSTLERFKKRSKTENDKDLLASPNH 426 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 E + D +A E E+ + +T I + Sbjct: 427 SSSLKEKRKVDNNSQLDTFIKIASEIIARDKREEKSFNALCEEEDIEETKTVCTNTFIKT 486 Query: 455 QTLLT---PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + + + E + + ++ + + A I IP +++ + Sbjct: 487 TSQIIAKDDCGTNKSEEKSLNTLCEEDIIEEIKTVCSSTTKEAENIVTIPKTINECEDKE 546 Query: 512 LLRDIIDEIIDSSTTYTLQDRIEN 535 + +EI + + L +RIE Sbjct: 547 EIEKT-NEIKITKSPSQLDNRIEE 569 Score = 154 bits (388), Expect = 5e-35, Method: Composition-based stats. Identities = 56/241 (23%), Positives = 109/241 (45%), Gaps = 8/241 (3%) Query: 353 THLPKYATSLTNTQEKLFLQENRLSTN-DLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 P + + + E+ ++N + + D S + + + + Sbjct: 598 QDAPLKSQDIRKSIEQKVTKDNDIKVRFRSKINPDSNKSAEEELRKHISKEDFANMDVIG 657 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 Q + +II++ + L I+DQHA E+ FE+++ ST + +Q L+ P+ + L G + Sbjct: 658 QFNLGFIITKLKNDLFIIDQHATDEKYNFEQLQ---ASTVMENQVLVNPKPLQLTAGNES 714 Query: 472 LIMEHDEDLHRLGI--KAERFGPNA--IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 L++E+++ ++ G K + P +++ IP S Q + +++ + DS+ T Sbjct: 715 LLIENEDIFNKNGFTFKIDESAPCTQKVSLTSIPLSKSMVFGKQDIEEMLFMLQDSNHTM 774 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 RI + AT AC S+ G+ + +M RL+ M + C HGRPT L D Sbjct: 775 CRPSRIRAMFATRACRKSVMIGKPLSKSDMRRLVNHMGEIEQPWNCPHGRPTMRHLINLD 834 Query: 588 I 588 + Sbjct: 835 L 835 >gi|292619425|ref|XP_693648.4| PREDICTED: mismatch repair endonuclease PMS2 [Danio rerio] Length = 849 Score = 243 bits (621), Expect = 5e-62, Method: Composition-based stats. Identities = 83/368 (22%), Positives = 159/368 (43%), Gaps = 27/368 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + ++ ++QI +G+++ + A+KEL+ENS+DA ++ V+ + G +++DNG G Sbjct: 12 IKAIDKQSVHQICSGQVVLSLATAVKELVENSIDAGATNVDVKLKDNGIELVEVSDNGKG 71 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + + +H TSK+ + D ++ TFGFRGEAL S+ A+S L++++ GA+ Sbjct: 72 VEEQNYEGLTLKHHTSKLKEFSDLIHVETFGFRGEALSSLCALSDLSVVTCHESAQIGAR 131 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + + +++ P GT V ++ LF T+P R F ++ + E + + V++ I Sbjct: 132 LVYDHDGRLTQCVPHPRQHGTTVTLQKLFSTLPVRHKEFQRNIKKEYSKMIFVLQSYCII 191 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE------ 230 V T S + R + S + + + I V G + + + + S Sbjct: 192 STGVRITCSNQMGQGKRSTVLCTSGSNSMRDNIGAVFGPKQLQSLIPFRQISPNDSVKED 251 Query: 231 ------------ITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETI 276 + G+ G + ++ + FIN R + + Y Sbjct: 252 YGLGGVDVPKDLFNIDGFVSQGDHGVGRSATDRQFFFINKRPCDPVKVSKLVNEVYHMY- 310 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 +YP V L + + VDVNV P K I + ++ + S+ S Sbjct: 311 NRHQYPFVALNIAVASDCVDVNVTPDKRQILLQEEKLLLAILKSSLIAMFETGVNKISLN 370 Query: 337 LSKKMISS 344 +S Sbjct: 371 HISPAFTS 378 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 61/336 (18%), Positives = 125/336 (37%), Gaps = 13/336 (3%) Query: 258 TVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV-HPAKSYIRFRNPTIIRN 316 + + ++ + L E Q + P R + +N Sbjct: 518 FLHHGINKTDVKAEIVDKPMDENLWSYETLPETKSEQHQNRIFSPEAKRARREDEPPAQN 577 Query: 317 FIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL 376 ++ + + K + ++ K ++ F Q L K L + K QE + Sbjct: 578 CLVDFKSRNASLKFDAPVNIKKKTVLLPFSQQ-----ELSKRMQRLQAQRTKSNEQEPKY 632 Query: 377 STNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + + +++ +E ++ Q + +II++ L I+DQHA E Sbjct: 633 RRFRAKINPGENQTAEDELKKEISKDMFKEMEIIGQFNLGFIITKIKSDLFIIDQHATDE 692 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA----ERFGP 492 + FE ++ +T + Q L+ P+ + L ++ME+ E + G + Sbjct: 693 KYNFEMLQ---QNTVLKGQRLIVPQSLHLPAISETVLMENLEIFRKNGFDFLIDEDAQVM 749 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 + + + +P + P + ++I + DS R+ + A+ AC S+ G + Sbjct: 750 DRVKLVSLPTSKNWTFGPNDIEELIFMLSDSPGIMCRPSRVRQMFASRACRKSVMVGTAL 809 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 + EM +L+ M + C HGRPT L D+ Sbjct: 810 NTSEMKKLVLHMGEIEQPWNCPHGRPTMRHLANLDM 845 >gi|242207940|ref|XP_002469822.1| predicted protein [Postia placenta Mad-698-R] gi|220731053|gb|EED84901.1| predicted protein [Postia placenta Mad-698-R] Length = 709 Score = 243 bits (620), Expect = 6e-62, Method: Composition-based stats. Identities = 99/336 (29%), Positives = 160/336 (47%), Gaps = 12/336 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E +IN+IAAGEII RP+ A+KELIENSLDA+S+ + + GG QI DNG G Sbjct: 16 IRRLQESVINRIAAGEIIHRPASALKELIENSLDAQSTSIRVTVKDGGMRLLQIQDNGCG 75 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++P+ +R TSK+S D ++I T+GFRGEAL SI V+HL ++++ + + Sbjct: 76 IRKTDLPILAERFTTSKLSSFSDLAHIATYGFRGEALASISYVAHLMVVTKTKADACAWK 135 Query: 121 IAI-----SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLK--SEQVETNLITDVIR 173 + K ++ GT ++ AR++ + + + R Sbjct: 136 AIYTDGALAPTKGATSAEPKATAGTDGTTITVWHNALARMSGKPVLQYSDASVSASQLFR 195 Query: 174 RMAIAYPKVSF-TFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 R + P+VS + ST + + Q+ + D ++ E + + + Sbjct: 196 RAGSSGPEVSTPSGSTTEQAIRLLYGQTIAKDLLHTTVSSQSADTTSDDEEDADGVPQSS 255 Query: 233 LQGYTGIPTFNRGNANQFY--VFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 T A + +FIN R V I + Y +P + +L L+I Sbjct: 256 SWSAEAHFTNAHYQAKKMVLLLFINHRLVDSPRIKKALENVYTGILPKVKSTKDMLSLQI 315 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 DPR VDVNVHP K + F + +I I ++Q+ + Sbjct: 316 DPRAVDVNVHPTKREVHFLDEDVIIERIADALQQKL 351 >gi|221052410|ref|XP_002257781.1| mismatch repair protein pms1 homologue [Plasmodium knowlesi strain H] gi|193807612|emb|CAQ38117.1| mismatch repair protein pms1 homologue,putative [Plasmodium knowlesi strain H] Length = 1193 Score = 243 bits (620), Expect = 6e-62, Method: Composition-based stats. Identities = 81/337 (24%), Positives = 155/337 (45%), Gaps = 11/337 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI+ + E+ I+ I + ++I S +KEL+ENS+DA+++ ++ + G Q+ DNG Sbjct: 1 MKIQNIGEESIHNICSSQVIFTLSSVVKELVENSIDADATEIKIKLVENGIKLIQVNDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFS-NIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+ RH TSKI+ +D +++T GFRGEAL S+ +S L ++++ +++ Sbjct: 61 AGIKKSNFENVCARHATSKITEFEDIHTSLNTLGFRGEALNSLCMLSDLHIVTKHDESSH 120 Query: 118 GAQIAISG-EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRM 175 G + G ++S P+A GT V ++F IP R K+ + + + + ++++ Sbjct: 121 GYLLKFDGLGRLSHEEPIARLRGTTVSCENIFKNIPIRKKDFIKNIKSQLSDLLLLMQQY 180 Query: 176 AIAYPKVSFTFST------IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN 229 AI Y + F N + + + + G+ I N ++ N Sbjct: 181 AIIYSHIKFCIQNIVTVKGNVKNMNMLLTNGGKESIKNSVHTIYGKRNIGNLIDFNIDEE 240 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 E L+ Y R + + + +IN R + ++ I + YP+++ + Sbjct: 241 EWKLRAYISDNNSGRRDRDIQFYYINNRPIHVLKNVNKIINSIYREFNSRLYPIIICNIL 300 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 D + D+NV P K + F + I S+ + Sbjct: 301 SDTKNFDINVTPDKREVFFIYENELCEKIKTSLVSLL 337 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 78/226 (34%), Gaps = 66/226 (29%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L I+DQHAA E+ FEK + F + SQ L++ ++L + +I ++ E G Sbjct: 918 LFIIDQHAADEKSNFEKYNKIFT---MKSQKLISKIDLELSPAQIYIIEKNLEIFLHNGF 974 Query: 486 KAE------------------------------RFGPN-----AIAIREIPAILSKKNIP 510 E G + + +P K Sbjct: 975 DVEIVEEPAQKRRRLKADDSADAIDPTNVTDATDTGEGVLMQVKVYLLSLPVFNGKILEV 1034 Query: 511 QLLRDIIDEIIDSSTTYT---------------------------LQDRIENILATMACY 543 + ++ + + TY ++ ILA+ AC Sbjct: 1035 EDFMSLLHHLTEHPITYDKAKFQMFIRNKGQPNKKTDTWFNHNFPRPQKVWRILASKACR 1094 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIE 589 +I G+ + EM ++ +++ N C HGRPT + ++D++ Sbjct: 1095 NAIMVGKPLNVTEMIKIKKKLSVLKNPWNCPHGRPTIKYI-INDMD 1139 >gi|50291023|ref|XP_447944.1| hypothetical protein [Candida glabrata CBS 138] gi|49527255|emb|CAG60895.1| unnamed protein product [Candida glabrata] Length = 907 Score = 243 bits (620), Expect = 7e-62, Method: Composition-based stats. Identities = 89/450 (19%), Positives = 188/450 (41%), Gaps = 36/450 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I ++SE+ +++I +G++I + A+KEL+ENSLDA++++++ G +++DNG Sbjct: 1 MPISQISEQDVHRITSGQVIIDLASAVKELVENSLDAQATQIDITFRKYGIDGLEVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G++ ++ +H TSKI DD +NI+T GFRGEAL S+ ++ + +++ Sbjct: 61 TGISKDDYESLALKHHTSKIKNFDDVLTNINTLGFRGEALSSLCGIARMAVITTTQPPRA 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMA 176 +SS N GT V + DLF +P R +F ++ + +++ A Sbjct: 121 DRLEYDMAGHLSSKSTTTRNKGTTVIISDLFHNLPVRQKDFERTAKRHFTKCITLLQSYA 180 Query: 177 IAYPKVSFTFSTIKSNRYK--MNFQSTNGNFPERISQVIGEDFIN--------------- 219 I V T + I S K + + N N +RI + G + Sbjct: 181 IINESVRITVTNITSTGKKNNILSTAANQNLNKRIISIFGSTSLRGLSPISLTLDMNPFK 240 Query: 220 --------NAVELNEKSNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIR 269 + + + ++ + G +F + ++ ++F+N R + ++ Sbjct: 241 KNIKSRYVDDPDFDNMDYKVKVTGLFSQNSFGCGRTSKDRQFIFMNKRPIDYPAVVKCCN 300 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + +YP+ +L E+ P +DVN+ P K + N + + + +++ + + Sbjct: 301 EVYRTYNNV-QYPMFILNFELTPDLIDVNITPDKRTVVLHNEQSVIDVLYENLSDYFDTQ 359 Query: 330 GISTSSVLSKKMISSFHQ----DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 ++ + IS + + +++T E F+ + +L+ ++ Sbjct: 360 DMALPKEEPQDHISKRRRLLDHPSDSADDGSSSQLEISSTNESSFVTPIEMDITELVETN 419 Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 Y + Q + Sbjct: 420 SFEYDGKESLPASEPDFRNDIEDDNMQCNS 449 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 14/192 (7%) Query: 403 HYQLGIACAQIHQNYIISQTTDG----LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 ++ Q + +I+ G L IVDQHA+ E+ FE ++ +T+ SQ L+ Sbjct: 704 DFKDMKVVGQFNLGFILVTRNMGSNYDLFIVDQHASDEKFNFENLQ---QTTRFKSQKLI 760 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAER----FGPNAIAIREIPAILSKKNIPQLLR 514 +PE I+L + ++M++ R G K E + + + IP + Sbjct: 761 SPETIELSVIDELIVMDNLSVFERNGFKIEIDEDAMAGHKVKLISIPVSKRTIFGVADFQ 820 Query: 515 DIIDEIIDSS---TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 +++ I + + +I + A AC SI G+ + M R+++ + Sbjct: 821 ELVYLIKEDGGTNKSNIKCSKIRAMFAMRACRSSIMVGKPLNMRTMTRVVQNLSTLDKPW 880 Query: 572 QCNHGRPTFIKL 583 C HGRPT L Sbjct: 881 NCPHGRPTMRHL 892 >gi|242819382|ref|XP_002487307.1| DNA mismatch repair protein (Pms1), putative [Talaromyces stipitatus ATCC 10500] gi|218713772|gb|EED13196.1| DNA mismatch repair protein (Pms1), putative [Talaromyces stipitatus ATCC 10500] Length = 1012 Score = 243 bits (619), Expect = 8e-62, Method: Composition-based stats. Identities = 96/471 (20%), Positives = 182/471 (38%), Gaps = 26/471 (5%) Query: 11 INQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 ++QI +G++I +KEL+ENSLDAE++ +E G ++ DNG G+ Sbjct: 22 VHQIQSGQVIVDLCSVVKELVENSLDAEATSIEIRFKNDGLDSIEVQDNGSGIDPRNYES 81 Query: 71 AVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPP-QNNTGAQIAISGE- 126 +H TSK++ DD +++ TFGFRGEAL S+ AVS+ +++ Q ++ Sbjct: 82 IALKHYTSKLTSYDDLTSLTTFGFRGEALSSLCAVSNFRIITAQAHQAPKANKLEFEHSG 141 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIAYPKVSFT 185 K+ + VA GT V + +LF +P R K+ + E + +++ A V F+ Sbjct: 142 KLKGTQVVAGQKGTTVSISNLFSRLPVRRKELEKNIKRELAKVVNLLNEYACISIGVRFS 201 Query: 186 FSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKSNE------------- 230 S + ++ +T N + I+ V G + + L + Sbjct: 202 VKNTDSKKRQLVLLTTKANSSIRDNIANVYGAKTLLTLIPLELELEFEPSATGKRLNRDL 261 Query: 231 --ITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 I ++GY P RG ++ ++N R I Y + + P V+ Sbjct: 262 NKIHVRGYVSRPVVGEGRGTRDRQMYYVNSRPCGIPQIAKAFNEVYKTY-NISQAPFVLA 320 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK-KGISTSSVLSKKMISSF 345 ++D DVNV P K I + + +++ + + + S + + Sbjct: 321 DFQMDTNAYDVNVSPDKRTILLHESAALIESLKEALDQLFQEAEQTVPQSRFTSNKQQTD 380 Query: 346 HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 Q + + TQ + + + + T + + E E + Sbjct: 381 IQQRFQSSPMGGITDRSRITQATPVEESQIDMSEQVQVTPQHTQEDQAEEEPEIETVTQE 440 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 + + + ++ DG D+ R +M N +I + Sbjct: 441 VTDRQIMVVDTHAGTEELDGPEDADEAVKRIRARAAEMSPQRNERRIPTLQ 491 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 112/313 (35%), Gaps = 38/313 (12%) Query: 305 YIRFRNPTIIRNFIIQSIQKAI--NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSL 362 + R +++ I ++ ++A ++ + K ++ H L T + Sbjct: 650 EKKAREDAKVQDLIRKAEERAATHSENHSKRGKCIEKGQQTNKHSTAQLVGTLESSLTKI 709 Query: 363 TNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-----EATHYQLGIACAQIHQNY 417 E L Q D ++ + + EE + Q + + Sbjct: 710 QTQMEALQKQLQSYEGFDATKEEEELFGKQQKTGEERLSLTVSKDDFAKMRIVGQFNLGF 769 Query: 418 IISQTTDG-----------LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 I++ + G L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL Sbjct: 770 ILATRSHGVDEPTAPTQDELFIIDQHASDEKYNFERLQ---AETVVQNQRLVHPKTLDLT 826 Query: 467 EGECALIMEHDEDLHRLGIKAE-------RFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 E +I E+ L + G E G I +P + L ++I Sbjct: 827 AVEEEIIRENKAALEKNGFVIEVDDTGDEPIGRRCKLI-SLPLSKEVVFDVRDLEELIVL 885 Query: 520 IIDSSTTY---------TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 + ++ T ++ + A AC SI G+ + +M + +R M Sbjct: 886 LSEAPTARNSLTSDTYVPRPSKVRKMFAMRACRSSIMIGKTLTVKQMEKAVRNMGTIDKP 945 Query: 571 SQCNHGRPTFIKL 583 C HGRPT L Sbjct: 946 WNCPHGRPTMRHL 958 >gi|126334368|ref|XP_001377577.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 989 Score = 243 bits (619), Expect = 8e-62, Method: Composition-based stats. Identities = 85/352 (24%), Positives = 151/352 (42%), Gaps = 27/352 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ + A+KEL+ENS+DA ++ ++ + G +++DNG G Sbjct: 138 IKPIDRKSVHQICSGQVVLNLATAVKELLENSVDAGATNIDLKLKEYGADLIEVSDNGLG 197 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI D D +++ TFGFRGEAL S+ A+S + + + G + Sbjct: 198 VEKENFEGLTLKHHTSKIQDFSDLTHVETFGFRGEALSSLCALSDVMISTCHKSATIGTR 257 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF T+P R F ++ + E + V++ I Sbjct: 258 LVFDHNGKIVQKIPYPRPQGTTVSVQQLFSTLPVRYKEFQRNIKKEFTKMVQVLQAYCII 317 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE---------- 226 + + + R + + N E I V G+ + + + + Sbjct: 318 STGIRINCTNQIGQGKRQTIVGTNGNSTIKENIGAVFGQKQLQSLIPFVQLPPSESICEE 377 Query: 227 --------KSNEITLQGYTGIPTFNRGNAN--QFYVFINGRTVQDKFILSTIRTAYAETI 276 N ++ G+ G + + + FIN R I + Y Sbjct: 378 FGINCNDALHNLFSISGFVSRSDHGVGRSTTERQFFFINQRPCDPAKISRIVNEVYH-LY 436 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 +YP VVL + +D VD+NV P K I + + + S+ + Sbjct: 437 NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKFLLAVLKTSLIGMFDS 488 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 7/204 (3%) Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S + +++ +E + Q + +II++ + L I+DQHA E+ FE + Sbjct: 780 SPGENQAAEDELRKEISKDMFAEMEIIGQFNLGFIITKLNEDLFIIDQHATDEKYNFEML 839 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK--AERFGP--NAIAIRE 499 + T + Q L+ P+ ++L A+++E+ E + G + P + + Sbjct: 840 QLH---TVLQGQRLIMPQTLNLTAVNEAILIENLEIFRKNGFDFIIDEHAPVTERVKLIS 896 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 +P + PQ + ++I + D R+ + A+ AC S+ G + EM + Sbjct: 897 LPTSKNWTFGPQDIDEMIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNKNEMKK 956 Query: 560 LLREMEKNPNSSQCNHGRPTFIKL 583 L+ M + + C HGRPT + Sbjct: 957 LITHMGEIEHPWNCPHGRPTMRHI 980 >gi|328769413|gb|EGF79457.1| hypothetical protein BATDEDRAFT_89533 [Batrachochytrium dendrobatidis JAM81] Length = 613 Score = 243 bits (619), Expect = 9e-62, Method: Composition-based stats. Identities = 119/609 (19%), Positives = 238/609 (39%), Gaps = 87/609 (14%) Query: 58 DNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ- 114 DNG G++ ++ + +R+ TSKIS+ D S I++FGFRGEAL S+ +S ++L + + Sbjct: 4 DNGCGISEVDLAVIGKRYYTSKISEFEDISTINSFGFRGEALNSLCTISKVSLTTCTKET 63 Query: 115 NNTGAQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE-QVETNLITDVI 172 G ++ + ++ +A PGT +++ ++F +P RL K + + E + + Sbjct: 64 MPLGFKLEYNLSGEVIQKSRIARAPGTTIQITNIFSQLPVRLCEFKRQIKKEYIKCIECV 123 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKSNE 230 + A++ V F + S K N T G+ E + V G F + +++ + Sbjct: 124 QAYALSSTGVRINFLNVSSKGSKSNILQTKGSNVLRENVISVFGAAFCKSLLDIRFEFTH 183 Query: 231 ----------------------------ITLQGYTGIPTFNRGN--ANQFYVFINGRTVQ 260 + + G P G ++ ++F+N R V Sbjct: 184 KSNTNDSSVKLDKITAETFNLEEAHASPVVVSGLLSKPQLGCGRTGRDRQFIFVNRRPVD 243 Query: 261 DKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQ 320 + +I Y + + + P+ +L + +DP +DVN+ P K + N + I + Sbjct: 244 IAKVSKSINDTYHDFVTT-QNPIFILNISVDPGWIDVNISPDKRLLAILNEAALIQGIQE 302 Query: 321 SIQKAIN-----------------------KKGISTSSVLSKKMISSF---HQDNAPKTH 354 IQ+++ + S + + IS F H +N P + Sbjct: 303 GIQRSLRPLREMFDHPISSSQGRSSQGSSIESFPIGISTIKTRPISRFVTDHSENMPDCN 362 Query: 355 LPKYATSLT--------------NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES- 399 + + ++L + + T L ++ E + Sbjct: 363 FQSKSAMDSIGSLMHQDYNGLVQVNTDQLRRRFKSMKTLTKLYPRSHRILLNSKLAEPTF 422 Query: 400 -EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 + + ++ Q + +I++ + + I+DQHA+ E+ +E ++Q + T Q L+ Sbjct: 423 IQKSDFKSMTVLGQFNLGFILALHGNMIFIIDQHASDEKYRYETLQQIAMT---TFQPLV 479 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERF---GPNAIAIREIPAILSKKNIPQLLRD 515 + L + LI++ + L G E+ G + + +P I L + Sbjct: 480 QKLELTLTYQQERLILQWKQSLRERGFVLEQIEKDGRDYFQLIAVPHIRDLHLGIADLEE 539 Query: 516 IIDEI-IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 I+ ++ S R A+ AC + G + +M ++ M + C Sbjct: 540 ILAKLGPASGQRVPHCTRTLKYFASKACRQATMIGDPLSYAKMCAIIENMGRIEQPWNCP 599 Query: 575 HGRPTFIKL 583 HGRPT L Sbjct: 600 HGRPTMRLL 608 >gi|123479589|ref|XP_001322952.1| DNA mismatch repair protein [Trichomonas vaginalis G3] gi|121905807|gb|EAY10729.1| DNA mismatch repair protein, putative [Trichomonas vaginalis G3] Length = 687 Score = 243 bits (619), Expect = 9e-62, Method: Composition-based stats. Identities = 101/384 (26%), Positives = 179/384 (46%), Gaps = 20/384 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E +I +IAAGE+I P KEL+EN+LD+ + R+ + GGG + +++DNG G Sbjct: 19 IHQLDETVIKRIAAGEVIHGPINVFKELLENALDSGADRISIIFKGGGTTLIEVSDNGCG 78 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ E++ + +RH TSKI+ D + + TFGFRGEAL SI +S+L++ + G Sbjct: 79 ISDEDMELVCKRHTTSKITSYKDIAELQTFGFRGEALFSISCISNLSIKTNQKDTTLGTL 138 Query: 121 -IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +G+ I ++ GT + +++F RLN L + ++ + ++ + +A Sbjct: 139 GNYYNGDLIGELQSCTCTKGTTITAQNIFLGNQQRLNSLPNFRLRNRKVIFLMLKYCVAM 198 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F+ ++ + + +T+ + + ++ + + + G Sbjct: 199 PNVAFSLFVDDKDKIRSSGMATHEDVLRSLFSYQDTTRLDFEITKTASAAI-----FLGS 253 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P N VF+NGR V + I I Y + G P ++LL+I + +DVNV Sbjct: 254 PKKKMMKING--VFVNGRLVHNDTIKRGITKLYDQYTKPGVIPFFIVLLKISSQNLDVNV 311 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN----------KKGISTSSVLSKKMISSFHQDN 349 HPAK + I N I+ +++ + K T+S I +++ Sbjct: 312 HPAKKTVLIAREKFIANVILSKVEQHLKVLYSKREEKTKIVNFTNSEEVHDEIPPLRKNS 371 Query: 350 APKTHLPKYATSLTNTQEKLFLQE 373 KT L + E FL E Sbjct: 372 YVKTKLEIESEEKQKDVEAHFLDE 395 >gi|326922471|ref|XP_003207472.1| PREDICTED: PMS1 protein homolog 1-like [Meleagris gallopavo] Length = 920 Score = 242 bits (618), Expect = 1e-61, Method: Composition-based stats. Identities = 91/357 (25%), Positives = 165/357 (46%), Gaps = 19/357 (5%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++LS + + +++ ++I +KELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLSAETVRLLSSSQVITSVVSVVKELIENSLDACATTIDIRLENYGFDKIEVRDNGNGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 ++P+ +H TSKI S+D + T+GFRGEAL SI VS + + ++ ++ Q Sbjct: 62 KVADVPVMAVKHYTSKINSSEDLERLTTYGFRGEALGSICCVSEVLVTTKTADDDISTQY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + ++S +P + GT V V LF +P R F K + E + D++ I Sbjct: 122 VLDSNGHVTSQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTNKKCKEELKKVQDLLIAYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE--LNEKSNEITLQG 235 P++ TF K+ ++ N S + V+G + + V + EI L G Sbjct: 182 IKPELRITFVHNKAAIWQKNRVS---DHKMACMSVLGTAVMGSMVPFQHRCEDPEINLSG 238 Query: 236 YTGI-----PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR---YPVVVLL 287 + + ++ + ++FIN R V K IL IR Y+ + YPV L Sbjct: 239 FLPKAESDSSLTSLSSSERSFIFINDRPVHQKEILKLIRQYYSVLMQKDSARLYPVFFLN 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 + + VDVN+ P K+ + + + + ++ + S +K ++S Sbjct: 299 ITVPASAVDVNLTPDKTEVLLQYKDCVLLAVEHVLKSLYGPLPATVSGEANKTDVTS 355 >gi|70940514|ref|XP_740663.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56518530|emb|CAH84055.1| hypothetical protein PC300836.00.0 [Plasmodium chabaudi chabaudi] Length = 357 Score = 242 bits (618), Expect = 1e-61, Method: Composition-based stats. Identities = 81/329 (24%), Positives = 154/329 (46%), Gaps = 10/329 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI+ + ++ I+ I + ++I S +KEL+ENS+DA ++ ++ + G +++DNG Sbjct: 1 MKIKSIGDESIHNICSSQVIFTLSNVVKELVENSIDAGATEIKVKLVENGIKLIEVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI-HTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+ RH TSKIS DD N+ T GFRGEAL S+ +S L + ++ + Sbjct: 61 NGIKKINFENVCARHATSKISEFDDIHNVLDTLGFRGEALNSLCMLSDLYISTKHDEFEH 120 Query: 118 GAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRM 175 G + K+ P+A GT V ++F IP R +K+ + + + + ++++ Sbjct: 121 GYLLKFDKFGKLLHEEPIARLRGTTVSCENIFKNIPIRKKDLIKNIKNQLSDLLSLMQQY 180 Query: 176 AIAYPKVSFTFSTI-----KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE 230 AI Y ++ F I + M + + + + + G+ I N ++LN K+ Sbjct: 181 AIIYHEIKFMIFNIVTQKGSTKNMNMLITNGSDDIKKNFYSIFGKKTIGNLIDLNIKNEN 240 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 ++GY R + + + ++N R + ++ I YP+++ + Sbjct: 241 WLVKGYISDSNSGRRDKDLQFYYMNSRPIHVIKNVNKIINTIYREFNSRLYPIIICNIIS 300 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 D + +D+NV P K + F + I Sbjct: 301 DAKNIDINVTPDKREVFFTFENELCEQIK 329 >gi|296205072|ref|XP_002749606.1| PREDICTED: PMS1 protein homolog 1 [Callithrix jacchus] Length = 931 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 106/460 (23%), Positives = 189/460 (41%), Gaps = 37/460 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R +N Q Sbjct: 62 KAADAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P + F K+ ++ S + + V+G +NN E + + ++I L G Sbjct: 182 LKPDLRIVFVHNKAVIWQKTRVSGH---KMALMSVLGTAVMNNMKSFEYHSEDSQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YP+ L Sbjct: 239 FLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPIFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQ-----------SIQKAINKKGISTSSV 336 +++ VDVN+ P KS + +N + + + NK +S + + Sbjct: 299 IDVPTADVDVNITPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSCENNKTDVSAADI 358 Query: 337 LSKKMISS---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTY 389 + K + F + + + P TS+ Q + E+ +T+D L D Y Sbjct: 359 VLSKTAETDMLFTKMESSGKNYPNVDTSVIVFQNDVHNDESVKNTDDCLNHQISVGDFGY 418 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + A + ++ +Q Sbjct: 419 GHCSSENSDIDKNTENAFQDIAMSNLSWENTQMEYSKTCF 458 >gi|84784055|gb|ABC61991.1| MLH1-like protein 3 [Trichomonas vaginalis] Length = 687 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 101/384 (26%), Positives = 179/384 (46%), Gaps = 20/384 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L E +I +IAAGE+I P KEL+EN+LD+ + R+ + GGG + +++DNG G Sbjct: 19 IHQLDETVIKRIAAGEVIHGPINVFKELLENALDSGADRISIIFKGGGTTLIEVSDNGCG 78 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ E++ + +RH TSKI+ D + + TFGFRGEAL SI +S+L++ + G Sbjct: 79 ISDEDMELVCKRHTTSKITSYKDIAELQTFGFRGEALFSISCISNLSIKTNQKDTTLGTL 138 Query: 121 -IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 +G+ I ++ GT + +++F RLN L + ++ + ++ + +A Sbjct: 139 GNYYNGDLIGELQSCTCTKGTTITAQNIFLGNQQRLNSLPNFRLRNRKVIFLMLKYCVAM 198 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI 239 P V+F+ ++ + + +T+ + + ++ + + + G Sbjct: 199 PNVAFSLFVDDKDKIRSSGNATHEDVLRSLFSYQDTTRLDFEITKTASAAI-----FLGS 253 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P N VF+NGR V + I I Y + G P ++LL+I + +DVNV Sbjct: 254 PKKKMMKING--VFVNGRLVHNDTIKRGITKLYDQYTKPGVIPFFIVLLKISSQNLDVNV 311 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAIN----------KKGISTSSVLSKKMISSFHQDN 349 HPAK + I N I+ +++ + K T+S I +++ Sbjct: 312 HPAKKTVLIAREKFIANVILSKVEQHLKVLYSKREEKTKIVNFTNSEEVHDEIPPLRKNS 371 Query: 350 APKTHLPKYATSLTNTQEKLFLQE 373 KT L + E FL E Sbjct: 372 YVKTKLEIESEEKQKDVEAHFLDE 395 >gi|150865337|ref|XP_001384508.2| hypothetical protein PICST_58454 [Scheffersomyces stipitis CBS 6054] gi|149386593|gb|ABN66479.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 809 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 122/610 (20%), Positives = 246/610 (40%), Gaps = 64/610 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ + +K +++I +G++I +KEL+ENS+DA S+++E G +TDNG Sbjct: 1 MAIKSIDQKDVSKITSGQVIIDLKSIVKELVENSIDANSTKIEINFQNYGIDSISVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAV-SHLTLMSRPP---- 113 G+ E+ R TSKIS +D + T GFRGEAL SI +V S + +++ Sbjct: 61 KGIKKEDFEFVCLRSHTSKISEFEDLDKLSTLGFRGEALNSICSVSSKVKIVTCTDYPKN 120 Query: 114 ---QNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLIT 169 + +++ S KI GT V + +FF +P R NF+K+ + E + Sbjct: 121 HELDYDKAGKLSKSVSKIGGGFS--KQTGTSVSIEKIFFDLPVRLKNFVKNSKREFHKAI 178 Query: 170 DVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN---FPERISQVIGEDFINNAVELN- 225 + + + + YP++ F+ + +++ + S G+ + + V G + VEL Sbjct: 179 NFLTQYLLIYPEIKFSVFNVVNSKKSLALSSRGGSKSTILDNMITVFGANGAKGLVELKL 238 Query: 226 EKSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPV 283 S +I ++GY +F G + ++ ++FIN R V K + + Y + +YP+ Sbjct: 239 LISEDIQIEGYISSYSFGLGRSVTDRQFMFINKRPVMLKKLSKIVNDVYKSFNHM-QYPI 297 Query: 284 VVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-NKKGISTSSVLSKKMI 342 +L + IDP +DVN+ P K I + + I + ++ + ++ ++ Sbjct: 298 FILNIAIDPSALDVNLTPDKGMIMIHSEQDLFEKIRLDLIGFFESQDNVIPRNLERHELN 357 Query: 343 SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 S K + KL L + ++ SD ++ Sbjct: 358 KSTFTKREKKPSVQNIEPDSDIEDIKLPLAKEMGESSIATESDTIVQESCASGLDN--IK 415 Query: 403 HYQLGIACAQIHQNYIISQTTDGL----VIVDQ---HAAHERLIFEKMRQDFNSTKITSQ 455 + + Q +++ + + L V+ D + E+ ++ I S Sbjct: 416 EHYQESNVVEDGQEHLLPEHEESLQVVTVVTDPETSNIDQEQRNTFELINKEREQDIGSP 475 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLH------------------------RLGIKAERFG 491 + I+ E +D+ + R + + Sbjct: 476 DDDEDQPIEGREDVDTKEEGNDQIIEDDSKNLASSKYSPINTLAPEYDDHRKNYQITQQK 535 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI-ENILATMACYGSIRS-- 548 I I E + + +L D++ ++S+ ++ + I E + C+ S+ + Sbjct: 536 KCLIRINE--QEFEESHNKRLKIDMLHNRVESANSHAIVSSIKEEM-----CHTSLNNNG 588 Query: 549 GRKMQSIEMN 558 R ++ +E+ Sbjct: 589 NRSLKLLEIQ 598 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 9/190 (4%) Query: 400 EATHYQLGIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 + Q + +I+ D L I+DQHA+ E+ FE++ I Q L+ Sbjct: 608 SRKDFLKMKLIGQFNLGFILVTLDDNNLFIIDQHASDEKYNFERL---NQELSIKIQRLI 664 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKNIPQLLR 514 P+ I+L + L++EH++ G + E + I + +P+ + Sbjct: 665 VPQTIELSIIDELLVIEHEQIFMSNGYQFTVVLEAKPGSRIRLNTMPSSRGVVFDLNDFQ 724 Query: 515 DIIDEIIDSSTTYTLQ-DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 ++I+ + + L+ +I N+LA AC SI G+ + M ++++ + + C Sbjct: 725 ELINLVNTNPRNKNLKCSKIRNLLAMRACRSSIMIGQPLTRGRMTKVVQNLSQLDKPWNC 784 Query: 574 NHGRPTFIKL 583 HGRPT L Sbjct: 785 PHGRPTMRHL 794 >gi|83032814|ref|XP_729204.1| DNA mismatch repair protein [Plasmodium yoelii yoelii str. 17XNL] gi|23486315|gb|EAA20769.1| DNA mismatch repair protein, C-terminal domain, putative [Plasmodium yoelii yoelii] Length = 1157 Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats. Identities = 98/501 (19%), Positives = 196/501 (39%), Gaps = 18/501 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI+ + ++ I+ I + ++I S +KEL+ENS+DA ++ ++ + G +++DNG Sbjct: 1 MKIKSIGDESIHNICSSQVIFTLSNVVKELVENSIDAGATEIKVKLVENGIKIIEVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI-HTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+ RH TSKIS DD NI T GFRGEAL S+ +S L + ++ + Sbjct: 61 NGIKKINFENVCARHATSKISEFDDIHNILDTLGFRGEALNSLCMLSDLCISTKHDEFEH 120 Query: 118 GAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRM 175 G + K+ P+A GT V ++F IP R +K+ + + N + ++++ Sbjct: 121 GYLLKFDKFGKLIHEEPIARLRGTTVSCENIFKNIPIRKKDLIKNIKSQLNDLLTLMQQY 180 Query: 176 AIAYPKVSFTFSTIKSNR-----YKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE 230 AI Y ++ F + + + M + + + + + G+ I N ++ N + Sbjct: 181 AIIYHEIKFMIFNVVTQKGCTKNMNMLITNGSDDIKKNFYSIFGKKNIGNLIDFNITNEN 240 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 ++GY R + + + ++N R + ++ I YP+++ + Sbjct: 241 WLVKGYISDSNSGRRDKDLQFYYMNNRPIHVIKNVNKIINTIYREFNSRLYPIIIFNILS 300 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV-----LSKKMISSF 345 D + +D+NV P K + F + I + K + K + K Sbjct: 301 DSKNIDINVTPDKREVFFTFENELCEEIKTELIKLLTPKTSNFVDTQIGDYFFVKSSRLI 360 Query: 346 HQDNAPKTHLPKYAT-SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 + A + A T E+ E + Y+ PV E+E HY Sbjct: 361 KSEEAQNERQSERAEIERTEHGERTEYGERAEHGERQSERAEGEYTNVGRPVFENEELHY 420 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 + Y ++ + + + + E + K ++ + Sbjct: 421 TSIDYKKMVKNEYTENEENEENDKIFREEVSKNEDTENLYFSEGQNKYDNKMANQKDNNF 480 Query: 465 LLE--GECALIMEHDEDLHRL 483 + ++ + + Sbjct: 481 EDAEKSYISNGIKIKTEFEKF 501 Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 74/240 (30%), Gaps = 77/240 (32%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L I+DQHAA E+ FEK + F + SQ L+ ++L + +I ++ R G Sbjct: 871 LFIIDQHAADEKSNFEKYNKIFT---MKSQKLINKIELELSPAQIHIIEKNFVIFLRNGF 927 Query: 486 KA--------------------------ERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 + E + + +P K ++ Sbjct: 928 EIEIIEEPINKKRKINNDENNDENIISEETLMEMKVYLLSLPVFNGKILEVVDFMSLLHH 987 Query: 520 IIDSSTTYT---------------------------LQDRIENILATM------------ 540 + + + ++ ILA+ Sbjct: 988 LTNHPIIFDKQIDNSFFRNNQKLIDNTETWFNYNFPRPQKVWKILASKYVSFCTVTVPLY 1047 Query: 541 --------ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF-IKLKLSDIEKL 591 AC ++ G+ + EM R+ +++ N C HGRPT + +I+K Sbjct: 1048 LFSPLFVSACRNAVMVGKTLNISEMIRIKKKLSVLQNPWNCPHGRPTIKYIINNIEIQKF 1107 >gi|312219347|emb|CBX99291.1| similar to DNA mismatch repair protein pms1 [Leptosphaeria maculans] Length = 1099 Score = 242 bits (617), Expect = 2e-61, Method: Composition-based stats. Identities = 105/460 (22%), Positives = 179/460 (38%), Gaps = 43/460 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I KEL+ENS+DA ++ +E G ++ DNG Sbjct: 3 TIKAIEGRSVHQIQSGQVIVDLQSVCKELVENSIDAGATAIEVRFKNNGLDSIEVQDNGA 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMS-RPPQNNTG 118 G+ + +H TSK++ DD S++ TFGFRGEAL S+ A+SH +++ R G Sbjct: 63 GIAPADYETIALKHYTSKLATYDDLSSLQTFGFRGEALSSLCALSHFHIVTARASDGPKG 122 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ K+ VA GT V V LF+ +P R K+ + E N + ++ A Sbjct: 123 TKLEFEQSGKLKDTSVVAAKQGTTVVVDTLFYNLPVRRKELEKNIKREYNKVLQLLNAYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKSN----- 229 + F+ S + K STN N E IS V G I + LN Sbjct: 183 CISVGIKFSVSNMMPKGKKTIAFSTNANPSTKENISNVYGAKTIAALIPLNLSFELDPSA 242 Query: 230 --------------------EITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILST 267 + ++G+ P R ++ F+N R + Sbjct: 243 QPGATQSAKNWSTQEDPGSSTVRIEGHVSRPVVGEGRQTPDRQMFFVNSRPCNLPQVAKA 302 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 Y + + P V + +D DVNV P K I N T++ + ++ + Sbjct: 303 FNEVYKSF-NITQSPFVFADIRLDTNAYDVNVSPDKRTIMLHNQTMLLENLKNALLELFE 361 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + S + T P + T+T+ QE+ D +P Sbjct: 362 GQNQSV------PQAQLLGKKPITSTFKPPTIQNRTSTRSIDEDQESETENMDSVPEAIT 415 Query: 388 TYSEDNDPVE--ESEATHYQLGIACAQIHQNYIISQTTDG 425 + P+E ++ + G A + + + DG Sbjct: 416 RSANVASPLESPDTPGANTHPGFVKASLIERFASQDAQDG 455 Score = 127 bits (319), Expect = 5e-27, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 113/316 (35%), Gaps = 39/316 (12%) Query: 304 SYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 + + R + I ++ + A + + +S L K + + + T Sbjct: 750 TEKKAREEAKVAQMIAEAEEAAAQPTQVNLKRASKLFKATQKKYWTVHLERVVETDIETI 809 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-----EATHYQLGIACAQIHQN 416 + + ++ S + L S P + EE + + Q + Sbjct: 810 RRQLRNIEPIGQSVPSNLNELNSLSPEAGPTQEDPEERLSLTVTKSDFSEMRIIGQFNLG 869 Query: 417 YII-------SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 +II + T L I+DQHA+ E+ FE++ +T + SQ L+ P ++L E Sbjct: 870 FIIAVRPPTTTSPTSDLFIIDQHASDEKYNFERL---SATTTLVSQRLVHPHPLELTAVE 926 Query: 470 CALIMEHDEDLHRLGIKAE--------------RFGPNAIAIREIPAILSKKNIPQLLRD 515 +I+ + L G E + + +P P L + Sbjct: 927 EEIILANQHALTANGFVVEMNTNPNNANDNNSQDEAGHRAKLTALPMSKEVTFSPTDLEE 986 Query: 516 IIDEIIDSSTTY--------TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 ++ I+D+ + ++ +LA+ AC S+ G+ +Q M ++R M Sbjct: 987 LLALILDNPPSSSTSTSPHIPRPSKVRKLLASRACRSSVMIGKTLQPPRMREIVRHMGSM 1046 Query: 568 PNSSQCNHGRPTFIKL 583 C HGRPT L Sbjct: 1047 DKPWSCPHGRPTMRHL 1062 >gi|239615471|gb|EEQ92458.1| DNA mismatch repair protein [Ajellomyces dermatitidis ER-3] Length = 1065 Score = 242 bits (617), Expect = 2e-61, Method: Composition-based stats. Identities = 86/399 (21%), Positives = 161/399 (40%), Gaps = 29/399 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I +KEL+ENSLDA ++ ++ G ++ DNG Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSLDIRFKNNGLDLIEVQDNGK 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G++ ++ +H TSK+S DD S++ TFGFRGEAL S+ A+S+ +++ Sbjct: 63 GISPDDYETVALKHYTSKLSKFDDLSSLQTFGFRGEALSSLCALSNFHIITAQAHQTPKA 122 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARL-NFLKSEQVETNLITDVIRRMA 176 +++ ++ S + VA GTI V +LF +P R K+ + E + ++ A Sbjct: 123 SRLEFETSGRLKSKQVVAGQKGTITSVENLFTKLPVRRLELQKNIKREYGKVLGLLHAYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELN--------- 225 V F + +T N E IS + G + + L+ Sbjct: 183 CVSTGVRFNVKNQMPKGKSVLVFATQSNATTKENISNIYGAKTLLSLTPLDLELEFQPSG 242 Query: 226 ----------EKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 + N+I +QG+ P F R ++ F+N R I Y Sbjct: 243 TGRCLIGGGSNEGNKILVQGHISKPVFGEGRQTPDRQMFFVNSRPCALPQIAKAFNEVYK 302 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 + + P + ++D DVNV P K I + + + S+ + ++ + Sbjct: 303 SF-NISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKTSLTELFERQDQTV 361 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ 372 + + S + + + E + Sbjct: 362 PHCQASRKQSMLQYPQSTNIPSSLGSEKPAKSSEPRQSE 400 Score = 129 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 30/196 (15%) Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 + + + D + I+DQHA+ E+ FE+++ T + +Q L+ P+ ++L E +I Sbjct: 829 NPSTLPGHKHDEVFIIDQHASDEKYNFERLQ---AETVVQNQRLVKPKTLELTAVEEEII 885 Query: 474 MEHDEDLHRLGIKAE-------RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 +++ L + G E G + +P L ++I + ++ Sbjct: 886 IDNLPALEKNGFVVEVDRSGNEPIGRRC-KLTSLPLSKEVVFNTGDLEELIVLLGETPQI 944 Query: 527 YT-------------------LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 T ++ + A AC SI G+ + + +M+R++R M Sbjct: 945 QTQSAPSPTSGSDVFAGKYIPRPSKVRKMFAMRACRSSIMIGKTLTTKQMDRVVRHMGMI 1004 Query: 568 PNSSQCNHGRPTFIKL 583 C HGRPT L Sbjct: 1005 DRPWNCPHGRPTMRHL 1020 >gi|261199400|ref|XP_002626101.1| DNA mismatch repair protein Pms1 [Ajellomyces dermatitidis SLH14081] gi|239594309|gb|EEQ76890.1| DNA mismatch repair protein Pms1 [Ajellomyces dermatitidis SLH14081] Length = 1065 Score = 241 bits (616), Expect = 2e-61, Method: Composition-based stats. Identities = 86/399 (21%), Positives = 161/399 (40%), Gaps = 29/399 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I +KEL+ENSLDA ++ ++ G ++ DNG Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSLDIRFKNNGLDLIEVQDNGK 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G++ ++ +H TSK+S DD S++ TFGFRGEAL S+ A+S+ +++ Sbjct: 63 GISPDDYETVALKHYTSKLSKFDDLSSLQTFGFRGEALSSLCALSNFHIITAQAHQTPKA 122 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARL-NFLKSEQVETNLITDVIRRMA 176 +++ ++ S + VA GTI V +LF +P R K+ + E + ++ A Sbjct: 123 SRLEFETSGRLKSKQVVAGQKGTITSVENLFTKLPVRRLELQKNIKREYGKVLGLLHAYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELN--------- 225 V F + +T N E IS + G + + L+ Sbjct: 183 CVSTGVRFNVKNQMPKGKSVLVFATQSNATTKENISNIYGAKTLLSLTPLDLELEFQPSG 242 Query: 226 ----------EKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 + N+I +QG+ P F R ++ F+N R I Y Sbjct: 243 TGRCLIGGGSNEGNKILVQGHISKPVFGEGRQTPDRQMFFVNSRPCALPQIAKAFNEVYK 302 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 + + P + ++D DVNV P K I + + + S+ + ++ + Sbjct: 303 SF-NISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKTSLTELFERQDQTV 361 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ 372 + + S + + + E + Sbjct: 362 PHCQASRKQSMLQYPQSTNIPSSLGSEKPAKSSEPRQSE 400 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 30/196 (15%) Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 + + + D + I+DQHA+ E+ FE+++ T + +Q L+ P+ ++L E +I Sbjct: 829 NPSTLPGHKHDEVFIIDQHASDEKYNFERLQ---AETVVQNQRLVKPKTLELTAVEEEII 885 Query: 474 MEHDEDLHRLGIKAE-------RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 +++ L + G E G + +P L ++I + ++ Sbjct: 886 IDNLPALEKNGFVVEVDRSGNEPIGRRC-KLTSLPLSKEVVFNTGDLEELIVLLGEAPQI 944 Query: 527 YT-------------------LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 T ++ + A AC SI G+ + + +M+R++R M Sbjct: 945 QTQSAPSPTSGSDVFAGKYIPRPSKVRKMFAMRACRSSIMIGKTLTTKQMDRVVRHMGMI 1004 Query: 568 PNSSQCNHGRPTFIKL 583 C HGRPT L Sbjct: 1005 DRPWNCPHGRPTMRHL 1020 >gi|327355152|gb|EGE84009.1| DNA mismatch repair protein [Ajellomyces dermatitidis ATCC 18188] Length = 1067 Score = 241 bits (616), Expect = 2e-61, Method: Composition-based stats. Identities = 86/399 (21%), Positives = 161/399 (40%), Gaps = 29/399 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I +KEL+ENSLDA ++ ++ G ++ DNG Sbjct: 5 TIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSLDIRFKNNGLDLIEVQDNGK 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G++ ++ +H TSK+S DD S++ TFGFRGEAL S+ A+S+ +++ Sbjct: 65 GISPDDYETVALKHYTSKLSKFDDLSSLQTFGFRGEALSSLCALSNFHIITAQAHQTPKA 124 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARL-NFLKSEQVETNLITDVIRRMA 176 +++ ++ S + VA GTI V +LF +P R K+ + E + ++ A Sbjct: 125 SRLEFETSGRLKSKQVVAGQKGTITSVENLFTKLPVRRLELQKNIKREYGKVLGLLHAYA 184 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELN--------- 225 V F + +T N E IS + G + + L+ Sbjct: 185 CVSTGVRFNVKNQMPKGKSVLVFATQSNATTKENISNIYGAKTLLSLTPLDLELEFQPSG 244 Query: 226 ----------EKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 + N+I +QG+ P F R ++ F+N R I Y Sbjct: 245 TGRCLIGGGSNEGNKILVQGHISKPVFGEGRQTPDRQMFFVNSRPCALPQIAKAFNEVYK 304 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 + + P + ++D DVNV P K I + + + S+ + ++ + Sbjct: 305 SF-NISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKTSLTELFERQDQTV 363 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ 372 + + S + + + E + Sbjct: 364 PHCQASRKQSMLQYPQSTNIPSSLGSEKPAKSSEPRQSE 402 Score = 129 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 30/196 (15%) Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 + + + D + I+DQHA+ E+ FE+++ T + +Q L+ P+ ++L E +I Sbjct: 831 NPSTLPGHKHDEVFIIDQHASDEKYNFERLQ---AETVVQNQRLVKPKTLELTAVEEEII 887 Query: 474 MEHDEDLHRLGIKAE-------RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 +++ L + G E G + +P L ++I + ++ Sbjct: 888 IDNLPALEKNGFVVEVDRSGNEPIGRRC-KLTSLPLSKEVVFNTGDLEELIVLLGETPQI 946 Query: 527 YT-------------------LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 T ++ + A AC SI G+ + + +M+R++R M Sbjct: 947 QTQSAPSPTSGSDVFAGKYIPRPSKVRKMFAMRACRSSIMIGKTLTTKQMDRVVRHMGMI 1006 Query: 568 PNSSQCNHGRPTFIKL 583 C HGRPT L Sbjct: 1007 DRPWNCPHGRPTMRHL 1022 >gi|154275042|ref|XP_001538372.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150414812|gb|EDN10174.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 1068 Score = 241 bits (616), Expect = 2e-61, Method: Composition-based stats. Identities = 96/451 (21%), Positives = 177/451 (39%), Gaps = 43/451 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I +KEL+ENSLDA ++ ++ G ++ DNG Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSLDIRFKNNGLDLIEVQDNGK 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G++ ++ +H TSK+S DD S++ TFGFRGEAL S+ A+S+ +++ Sbjct: 63 GISPDDYETVALKHYTSKLSKFDDLSSLQTFGFRGEALSSLCALSNFHIITAQAHEVPKA 122 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 +++ K+ S VA GT V +LF +P R K+ + E + ++ A Sbjct: 123 SRLEFEISGKLKSTHTVAGQKGTTASVENLFNRLPVRRRELEKNIKREYGKVLGLLHAYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEK------- 227 V F + +T N E IS + G + L+ + Sbjct: 183 CVSTGVRFNVKNQMPKGKSVVVFATKSNTSTSENISNIYGAKILLALTPLDLELEFKPSG 242 Query: 228 ------------SNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 N+I +QG+ P F R ++ F+N R I Y Sbjct: 243 MGKRLIGAGTNDPNKIFVQGHISRPIFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYK 302 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 + + P + ++D DVNV P K I + + + S+ Sbjct: 303 SF-NISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKVSL----------- 350 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 + L ++ + Q +S TN + F+ + + ++ S + ++ N Sbjct: 351 -TELFERQDQTVPQSQVSGKQSMLQHSSGTNIPK--FISKKSVESSAPQHSKEIGEADGN 407 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTD 424 + +E A + Y I + + Sbjct: 408 NEEDEQRAMRAFVQRFTGNSTTAYDIPEIPE 438 Score = 128 bits (322), Expect = 3e-27, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 32/203 (15%) Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 S D + I+DQHA+ E+ FE+++ T + +Q L+ P+I+ L E +I Sbjct: 829 DPRAFPSHKNDEVFIIDQHASDEKYNFERLQ---AETVVQNQRLVKPKILTLTAVEEEII 885 Query: 474 MEHDEDLHRLGIKAE--RFGPNAI----AIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 +++ L + G E R G I + +P Q L ++I + +S T Sbjct: 886 IDNLPALEKNGFVVEVDRSGDEPIGRRCKLTSLPLSKEMVFDTQDLEELIVLLGESPQTQ 945 Query: 528 ----------------------TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 ++ + A AC SI G+ + + +M+R++R M Sbjct: 946 SASSPSSSDSVLTPTTLGSKYIPRPSKVRKMFAMRACRSSIMIGKTLTNKQMDRVVRHMG 1005 Query: 566 KNPNSSQCNHGRPTFIKL-KLSD 587 C HGRPT L L + Sbjct: 1006 MIDKPWNCPHGRPTMRHLMSLGE 1028 >gi|150404121|gb|ABR68374.1| DNA mismatch protein [Lactobacillus casei] gi|150404143|gb|ABR68385.1| DNA mismatch protein [Lactobacillus casei] gi|150404191|gb|ABR68409.1| DNA mismatch protein [Lactobacillus casei] Length = 249 Score = 241 bits (616), Expect = 2e-61, Method: Composition-based stats. Identities = 79/253 (31%), Positives = 139/253 (54%), Gaps = 6/253 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI--SDDFSN 86 EL+ENS+DA++++++ I+ G +++DNG G+ +++ A RH TSKI + D N Sbjct: 1 ELVENSIDAQATQIDVFISAAGLQEIRVSDNGIGIAPDDVATAFLRHATSKILTTRDLFN 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRD 146 +H+ GFRGEAL SI AV+ + L + + G QI + G ++ + A GT VEV D Sbjct: 61 VHSLGFRGEALASIAAVADVKLTTAT-DSGIGTQIHVKGGEVEAQSTAAHRRGTDVEVND 119 Query: 147 LFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP 206 LFF PARL ++KS+Q E I D++ R+A+A P ++FT S + + + G+ Sbjct: 120 LFFNTPARLKYMKSQQTELGKIVDIVSRLAMANPDIAFTVSHDGNMVVR---TAGQGDLR 176 Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 + ++ + G + V+ + + + G T +P R + N + +NGR +++ + Sbjct: 177 QTLAGIYGFSVARSMVDFKAQDLDFRVSGLTSLPETTRASRNYLSLVVNGRYIKNFQLTK 236 Query: 267 TIRTAYAETIPLG 279 + Y + +G Sbjct: 237 AVIAGYGSKLMVG 249 >gi|190345899|gb|EDK37866.2| hypothetical protein PGUG_01964 [Meyerozyma guilliermondii ATCC 6260] Length = 859 Score = 241 bits (616), Expect = 2e-61, Method: Composition-based stats. Identities = 89/467 (19%), Positives = 187/467 (40%), Gaps = 32/467 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ + + +I +G++I +KEL+EN++D+ S++++ + G + +I D+G Sbjct: 1 MPIKNIDSTEVQRITSGQVIVDLVSVVKELVENAIDSGSTKIDVTFSDSGLDYIKIEDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NT 117 G+ E+ RH TSK+ + + + T GFRGEA+ SI +V++LT+ + QN Sbjct: 61 SGIEEEDFEYVCLRHHTSKLVSFEGLAQVSTLGFRGEAMSSICSVANLTISTCTKQNYPR 120 Query: 118 GAQIAISGEK--ISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRR 174 +Q+ + + V GT+V V LF +P R K+ + E + + Sbjct: 121 ISQLTFDNMGRLTGTEKSVGGLRGTVVTVTSLFNALPVRRKTLEKNIKREFQKAVNNLIC 180 Query: 175 MAIAYPKVSFTFSTI----KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN- 229 + +P++ FT I K + + + V G + ++ ++ Sbjct: 181 YILIHPEIRFTVYNITAAKKKQMMLGTQGGSKADIKSCLLNVYGSNGTYGLESVSLEAKE 240 Query: 230 ------------------EITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIR 269 +I +G +F G + ++ Y+++N R V+ + + T+ Sbjct: 241 LEVKFKLNAGDLPVLKRLDIKFEGMISNCSFGMGRSAGDRQYIYLNKRPVESRRFIKTVN 300 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y ++PVVVL + +D +D+NV P K + N ++ + + + K + Sbjct: 301 EVYRSF-NTVQFPVVVLNIVLDGDFLDINVTPDKRTVMIHNEDVLNDVLRHELTKFYESE 359 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 S D A + + +SL + + T + + Sbjct: 360 DTQIPVNSDSWESPSQSIDRAKRKEDYEQPSSLKRYHLAEDEELDADDTRNTENELNDIG 419 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + + E + + + T+ + ++ + +HE Sbjct: 420 ENVEEHKSQEEDQMEHDESYEEDSVNDREMIENTNNVDEMENNESHE 466 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 79/195 (40%), Gaps = 11/195 (5%) Query: 400 EATHYQLGIACAQIHQNYIISQTTDG--LVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + Q + +I+ G L IVDQHA+ E+ FE++ ++T SQ+L Sbjct: 653 SKKDFTKMQVVGQFNLGFILVTLNGGNNLFIVDQHASDEKYNFERL--ANSTTMFHSQSL 710 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKNIPQLL 513 + P ++L + ++ + E G + + + + +P + Sbjct: 711 VVPRNMELNALDEMTVLANLEVFKTNGFGLKVDEDEAPGHRVKLTSLPVSRTTVFDESDF 770 Query: 514 RDII---DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 ++I ++ + + +I ILA+ +C SI G+ + + M +++ + Sbjct: 771 HELIHLTNQAGSINNKHVKCSKIRTILASRSCRSSIMIGQPLSTSTMKKVVHNLSHLDKP 830 Query: 571 SQCNHGRPTFIKLKL 585 C HGRPT L Sbjct: 831 WNCPHGRPTMRHLTE 845 >gi|66810241|ref|XP_638844.1| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4] gi|74854421|sp|Q54QA0|PMS1_DICDI RecName: Full=Mismatch repair endonuclease pms1 gi|60467455|gb|EAL65478.1| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4] Length = 1022 Score = 241 bits (616), Expect = 2e-61, Method: Composition-based stats. Identities = 93/391 (23%), Positives = 158/391 (40%), Gaps = 52/391 (13%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + ++ IN I +G++I SIA+KELIENS+DA ++ VE + G+ F ++ DNG G Sbjct: 2 IKAIDKESINNICSGQVIFDLSIAVKELIENSIDAGATTVEIRLKEYGEEFIEVIDNGSG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +HCTSK+ D +I T+GFRGEAL S+ ++S+ + +R T + Sbjct: 62 VEPSNFVALTMKHCTSKLESFSDLLSIETYGFRGEALSSLCSLSNCIITTRTKNQVTAQR 121 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLK-SEQVETNLITDVIRRMAIA 178 + E KI + PVA GT V++ +LF +P R K + + E + +++ A+ Sbjct: 122 LVFDKEGKIQTQTPVAREVGTTVQLSNLFKGLPVRYQEFKRNIKKEYAKLLTILQAYALI 181 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 T KS R + ++ + + V G + E + + G Sbjct: 182 STNTRITCYNQAGKSPRSCVLSTTSGSTIRDNLINVFGTKMSQSLDEFTASDSLFKVNGL 241 Query: 237 TGI------------------------------------------PTFNRGNANQFYVFI 254 + +R A++ + F+ Sbjct: 242 ISKIGIGSGTGQSISNSSSSSSQSSSQLSSSSSSSSSSQSSQLSIGSLSRSCADRQFFFV 301 Query: 255 NGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 N R + + I + Y G YPVV+ +E+ DVNV P K I + + Sbjct: 302 NSRPFEHSKLAKEINSLYQSFHKRGSYPVVIFNIEMPTNNYDVNVTPDKRTIFIQKEQQL 361 Query: 315 RNFIIQSIQKAINKKGISTSSVLSKKMISSF 345 I + + SV + F Sbjct: 362 LLLITDG----LKTMWETAQSVFDTNQLGQF 388 Score = 143 bits (361), Expect = 8e-32, Method: Composition-based stats. Identities = 55/242 (22%), Positives = 102/242 (42%), Gaps = 12/242 (4%) Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE------ATHYQLG 407 +P+ + + + ++ + + + S+ N E E +++ Sbjct: 755 SIPQLDGKFSTSLGGIGAKQQQKAATQVTSQLQQQPSQTNQKTAEEELTKFFKKEYFKQM 814 Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 I Q + +II++ + L I+DQHAA E+ FE + + S+ + L + DL Sbjct: 815 IVIGQFNLGFIIAKLGNDLFIIDQHAADEKYNFEILSKSVESSINSQPLLKPDTLSDLTS 874 Query: 468 GECALIMEHDEDLHRLGIK--AERFGPNAIAIR--EIPAILSKKNIPQLLRDIIDEIIDS 523 E +I+E+ + + G K + P I+ P I + + + + I I +S Sbjct: 875 EEELIIIENVDLFKKNGFKFIIDHDAPTRFKIKLSAFPIIHGQSFGIKDIYEWIFMIKES 934 Query: 524 STTYTLQD--RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 S ++ R+ ++LA+ AC SI G + EM +L + N C HGRPT Sbjct: 935 SIPGSVNKIPRLNSLLASKACRKSIMVGTTLTHKEMKDVLNNLSTLDNPWCCPHGRPTMR 994 Query: 582 KL 583 L Sbjct: 995 HL 996 >gi|68071917|ref|XP_677872.1| mismatch repair protein [Plasmodium berghei strain ANKA] gi|56498149|emb|CAI04678.1| mismatch repair protein pms1 homologue, putative [Plasmodium berghei] Length = 1075 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 92/485 (18%), Positives = 198/485 (40%), Gaps = 23/485 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI+ + ++ I+ I + ++I S +KEL+ENS+DA ++ ++ + G ++ DNG Sbjct: 1 MKIKSIGDESIHNICSSQVIFTLSNVVKELVENSIDAGATEIKVKLVENGIKLIEVNDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI-HTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+ RH TSKIS DD NI +T GFRGEAL S+ +S L + ++ + Sbjct: 61 NGIKKINFENVCARHATSKISEFDDIHNILNTLGFRGEALNSLCMLSDLYISTKHDEFEH 120 Query: 118 GAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRM 175 G + K+ P+A GT V ++F IP R +K+ + + + + ++++ Sbjct: 121 GYLLKFDKFGKLLHEEPIARLRGTTVSCENIFKNIPIRKKDLIKNIKSQLSDLLSLMQQY 180 Query: 176 AIAYPKVSFTFSTIKSNR-----YKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE 230 AI Y ++ F + + + M + + + + + G+ I N ++LN K+ Sbjct: 181 AIIYHEIKFMIFNVVTQKGCTKNMNMLITNGSDDIKKNFYSIFGKKNIGNLIDLNIKNEN 240 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 +++GY R + + + ++N R + ++ I YP+++ + Sbjct: 241 WSVKGYISDSNSGRRDKDLQFYYMNSRPIHVIKNVNKIINTIYREFNSRLYPIIICNILS 300 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI------------NKKGISTSSVLS 338 D + +D+NV P K + F + I + K + + ++ + Sbjct: 301 DSKNIDINVTPDKREVFFTFENELCEEIKTELIKLLTPKTSNFVDTQIDDYFFVKNNRII 360 Query: 339 KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 K + + +T + T +E ++ ++DL + + +E Sbjct: 361 KNEETKNEETKNEETKNEETKNEETKNEESTNIERPLFESDDLSYTSINYKKIVKNEYKE 420 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER-LIFEKMRQDFNSTKITSQTL 457 + + + + + +++ FE +++ + I + Sbjct: 421 KKENYNIFRKEVNGNEDIENLYFNGEKQKKYNNKMDNQKDKNFEDTEKNYINNDIKIKKE 480 Query: 458 LTPEI 462 Sbjct: 481 FEKXY 485 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 76/228 (33%), Gaps = 58/228 (25%) Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 YI + L I+DQHAA E+ FEK + F + SQ L+ ++L + +I ++ Sbjct: 801 YIERKNNYALFIIDQHAADEKSNFEKYNKIFT---MKSQKLINKIELELSPAQIHIIEKN 857 Query: 477 DEDLHRLGIKAERFGPN--------------------------AIAIREIPAILSKKNIP 510 R G + E + + +P K Sbjct: 858 FVIFLRNGFEIEIIDEPINKKRKINNDENMDNNIINEEALMEMKVYLLSLPVFNGKILEV 917 Query: 511 QLLRDIIDEIIDSSTTYT---------------------------LQDRIENILATMACY 543 ++ + ++ + ++ ILA+ AC Sbjct: 918 VDFMSLLYHLSNNPIIFDKQIDGSFLKNNKKLTDNTEMWFNYNFPRPQKVWKILASKACR 977 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF-IKLKLSDIEK 590 ++ G+ + EM + +++ N HGRPT + +I+K Sbjct: 978 NAVMVGKTLNISEMITIKKKLSVLKNPWN-PHGRPTIKYIINNIEIQK 1024 >gi|218197517|gb|EEC79944.1| hypothetical protein OsI_21533 [Oryza sativa Indica Group] Length = 258 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 75/184 (40%), Positives = 118/184 (64%), Gaps = 5/184 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++I+QIAAGE++ERP+ A++EL++N+LDA + +V + GG + D+G Sbjct: 11 PIRDLPDELISQIAAGEVVERPASAVRELVDNALDAGARQVTVRLLAGGVRLIAVEDDGC 70 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ EE+P+A++RH TSKI++ D ++ T GFRGEAL +I +VS + L+SR + T Sbjct: 71 GIPPEELPVALRRHATSKITNLHDLESVATMGFRGEALAAIASVSEMALLSRTEEQPTAF 130 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + ++ RP A + GT VEV++LFF+ PAR FLK++ E + +RR A+ Sbjct: 131 LLDARSGEL---RPAARSRGTTVEVKELFFSTPARRKFLKTDATELAHCIEAVRRHALDR 187 Query: 180 PKVS 183 P V Sbjct: 188 PDVG 191 >gi|332814964|ref|XP_003309411.1| PREDICTED: PMS1 protein homolog 1 isoform 2 [Pan troglodytes] Length = 770 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 107/460 (23%), Positives = 192/460 (41%), Gaps = 37/460 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + +I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGRILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P + F K+ ++ +S + + V+G +NN + + + ++I L G Sbjct: 182 LKPDLRIVFVHNKAVIWQ---KSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YPV L Sbjct: 239 FLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSV 336 +++ VDVN+ P KS + +N + + + NK +S + + Sbjct: 299 IDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADI 358 Query: 337 LSKKMISS---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTY 389 + K + F++ + + TS+ Q + E+ +T+D L D Y Sbjct: 359 VLSKTAETDVLFNKVESSGKNYSNVDTSIIPFQNDMHNDESGKNTDDCLNHQISIGDFGY 418 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + + ++ SQT Sbjct: 419 GHCSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCF 458 >gi|255713860|ref|XP_002553212.1| KLTH0D11550p [Lachancea thermotolerans] gi|238934592|emb|CAR22774.1| KLTH0D11550p [Lachancea thermotolerans] Length = 697 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 127/674 (18%), Positives = 248/674 (36%), Gaps = 97/674 (14%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL++ + + + I+ + A++ L++NS+DA +S + + + F + DNG G Sbjct: 5 IRKLTDDVAKSLKSSASIDCITTALRLLLQNSIDAGASHITVFLDLPNR-VFTVADNGLG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 MT ++ Q++ TSK++D D ++ T+GF+G ++ I V+ + ++S+ ++G Sbjct: 64 MTRRDLTCFGQQNYTSKLTDVQDVDHLKTYGFKGCSIFEISNVAKIRVISKHESASSGWM 123 Query: 121 I----AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLN--FLKSEQVETNLITDVIRR 174 + GT+V V D F +P RL + + + I Sbjct: 124 KELGGRSEDINNPITEIEKLEKGTVVTVDDFFHNLPVRLESLERPTSGELLDRVRFDIFE 183 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNG---------NFPERISQVIGEDFINNAV-EL 224 + + +P+V +T + F T G + V G + N+ + + Sbjct: 184 ILVVHPEVEICINTEGACAGHSKFLETRGIKRSLPETEKLLLCLQDVFGLEGENSTLKPV 243 Query: 225 NEKSNEITLQGYTG-IPTFNRGNANQFYVFINGRTVQDKFILSTI-------RTAYAETI 276 + + + + G +PTF+ +++NG +D +L I R + +T Sbjct: 244 HAQFTDYVVDGLISEVPTFHIKI---QLLYVNGLKCEDSALLRPISRAFRNARNCWNQTH 300 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN--------- 327 Y + VL + + + + + + II I + I+ N Sbjct: 301 GRSGYEMHVLKISMPRCKAKILGGERSLGLGTKQYQIIHALIFKIIESVFNVKLNQYTAI 360 Query: 328 ---------KKGISTSSVLSKKMISSFHQDN-----APKTHLPKYATSLTNTQEKLFLQE 373 SS S + S F + PK P+++ +L +T + ++ Sbjct: 361 AHRPSKFNTSCTAWKSSNYSLRSASGFEEGKIPALKKPKPEPPEHSRNLKSTSTDIDFKK 420 Query: 374 NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN----------YIISQTT 423 + S+ + E + ++ Y + Sbjct: 421 LIQNAGCRGSSEASQEPIMSPFSTLQEHFVDRSLFKRFRVVNQVDKKFVLLKSYGSNPDI 480 Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT---PEIIDLLEGECALIMEHDEDL 480 LV++DQHAA ER+ +E + F +TS L +DL E + + +L Sbjct: 481 LSLVLLDQHAADERIKYESLLNGFIWGMLTSPHLHIRKAHIEVDLSPKEYHIFQQCKNEL 540 Query: 481 HRLGIKAE----RFGPNAIAIREIPAILSKKNIPQLLRDIIDE----------------- 519 H+ GI E + + + +P L ++I L II Sbjct: 541 HQWGILFEGKPVAKPRHLVKLTALPDPLQHRSIEALKNGIIQHACDLRHLRKNHFRSQST 600 Query: 520 ----------IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 + ++ I + L + AC +I G + E L+ + K N Sbjct: 601 QKLESGAAQNFAWWNYLNSIPTMITDSLKSKACRSAIMFGDYLSPQETTLLVEMLGKCRN 660 Query: 570 SSQCNHGRPTFIKL 583 C HGRP+ + + Sbjct: 661 PFYCAHGRPSLVPI 674 >gi|150404187|gb|ABR68407.1| DNA mismatch protein [Lactobacillus casei] Length = 249 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 79/253 (31%), Positives = 141/253 (55%), Gaps = 6/253 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI--SDDFSN 86 EL+ENS+DA++++++ +I+ G +++DNG G+ +++ A RH TSKI + D N Sbjct: 1 ELVENSIDAQATQIDVLISAAGLQEIRVSDNGIGIAPDDVATAFLRHATSKILTTRDLFN 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRD 146 +H+ GFRGEAL SI AV+ + L + + +G QI + G ++ + A GT VEV D Sbjct: 61 VHSLGFRGEALASIAAVADVKLTTAT-DSGSGTQIHVKGGEVEAQSTAAHRRGTDVEVND 119 Query: 147 LFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP 206 LFF PARL ++KS+Q E I D++ R+A+A P ++FT S + + + G+ Sbjct: 120 LFFNTPARLKYMKSQQTELGKIVDIVSRLAMANPDIAFTVSHDGNMVVR---TAGQGDLR 176 Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 + ++ + G + V+ + + + G T +P R + N + +NGR +++ + Sbjct: 177 QTLAGIYGLSVARSMVDFKAQDLDFRVSGLTSLPETTRASRNYLSLVVNGRYIKNFQLTK 236 Query: 267 TIRTAYAETIPLG 279 + Y + +G Sbjct: 237 AVIAGYGSKLMVG 249 >gi|196000426|ref|XP_002110081.1| hypothetical protein TRIADDRAFT_21244 [Trichoplax adhaerens] gi|190588205|gb|EDV28247.1| hypothetical protein TRIADDRAFT_21244 [Trichoplax adhaerens] Length = 832 Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats. Identities = 95/420 (22%), Positives = 177/420 (42%), Gaps = 32/420 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+++S+K ++QI +G++I + A+KEL+ENS+DA +++V+ + G +++DNG Sbjct: 7 TIKQISQKHVHQICSGQVILNLAAAVKELVENSVDAGANQVDVRLKDYGADTVEVSDNGS 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ + H TSK+ DD + TFGFRGEAL S+ + ++ + +R G Sbjct: 67 GIHPDDFEVLALMHHTSKLKEYDDLIGVETFGFRGEALSSLCGLCNVAITTRHKSQPNGT 126 Query: 120 QIAISGEKISSVRPVAM-NPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 +I I + GT V ++ LF T+P R F+++ + E N + V++ AI Sbjct: 127 KIEYDHRGIVKSKSACARQQGTTVTLQGLFSTLPVRHKEFVRNIKREFNKMIHVLQSYAI 186 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK-------- 227 + T + K+ R + +N E I + G +++ + Sbjct: 187 ISIGLRLTCNNQPVKNKRITVLSCQSNKGLKENIVDIFGPKQVSSLIPFVTHAPSESDCE 246 Query: 228 ----------SNEITLQGYTGIPTFN--RGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + ++ G + R ++ + FIN R I Y Sbjct: 247 SMGINPKLIDMSLFSISGLISKCDHSSGRTGNDRQFFFINKRPCDLIKASRVINETYHMY 306 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS 335 +YP L + + VDVNV P K I +N + I S+ + SS Sbjct: 307 -NRHQYPFFALDISLRKGTVDVNVTPDKRQILMQNEKALLTVIKASL---VRMYDPIASS 362 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 + I++ + ++ N E + E ++ L +D+ SE ++ Sbjct: 363 YEISRGITTGATTSTQSAAADQHDNE--NNDEIQIISEKDINNKKHLTNDECELSEVSNN 420 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 7/211 (3%) Query: 377 STNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 S+ + D + +N+ E +Q Q + +II++ L I+DQHA+ E Sbjct: 608 SSFHATIAPDNNTAAENELRREISKDMFQEMEIIGQFNLGFIIARHNQDLFIIDQHASDE 667 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP---- 492 + +E ++ + N Q L+ P+ + L E ++M++ + G Sbjct: 668 KYNYEYLQLNTNLKG---QQLIQPKHLFLTPTEEEVLMDNVNIFEKNGFSFSIDPDAPPT 724 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 I + +P + ++++I + D + + AT +C SI G + Sbjct: 725 KRIKMTSVPYGRGCIFNEEDVQEMIMMLTDMPGVMCRPTTVSRMFATRSCRRSIMIGTAL 784 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + +M ++L+ M + + C HGRPT L Sbjct: 785 NTSQMKKILKHMGEIEHPWNCPHGRPTMRHL 815 >gi|222619908|gb|EEE56040.1| hypothetical protein OsJ_04833 [Oryza sativa Japonica Group] Length = 1120 Score = 241 bits (615), Expect = 3e-61, Method: Composition-based stats. Identities = 112/541 (20%), Positives = 215/541 (39%), Gaps = 45/541 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L E ++N+IAAGE+I+RPS A+KELIENSLDA +S V + GG Q++D+G Sbjct: 17 RIRRLEESVVNRIAAGEVIQRPSSAVKELIENSLDAGASSVSVAVKDGGLKLIQVSDDGH 76 Query: 62 GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 G+ T K + +G G+AL S+ V H+T+ + G ++ Sbjct: 77 GIR------------THK--------NRWGSEGKALASMTYVGHVTVTTITEGQLHGYRV 116 Query: 122 AISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + + +P A GT V V +LF+ + AR L++ + I D I R A+ + Sbjct: 117 SYRDGVMENEPKPCAAVKGTQVMVENLFYNMVARKKTLQNSNDDYPKIVDFISRFAVHHI 176 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE-----ITLQG 235 V+F+ +NR ++ ST+ + I V G + + +E+ + + G Sbjct: 177 NVTFSCRKHGANRADVHSASTSSRL-DAIRSVYGASVVRDLIEIKVSYEDAADSIFKMDG 235 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y + +FIN R V + I Y+ T+P P + + + + V Sbjct: 236 YISNANYVAKKITMI-LFINDRLVDCTALKRAIEFVYSATLPQASKPFIYMSIHLPSEHV 294 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVN+HP K + N I I +I++ + + +S Q N K + Sbjct: 295 DVNIHPTKKEVSLLNQERIIETIRNAIEEKLMNSNTTRIFQTQALNLSGIAQANPQKDKV 354 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 + + +K+ + + + TY E + + + Sbjct: 355 SEASMGSGTKSQKIPVSQMVRTDPRNPSGRLHTYWHGQSSNLEKK-------FDLVSVSK 407 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 + Q + E +++ E +++ E ++ E Sbjct: 408 ELMYQQALCRFGNFNAIQLSEPAPLQELLVMALKDDELMSDEKDDEKLEIAEVNTEILKE 467 Query: 476 HDEDLHR-LGIKAERFGPNAIAIREIPAILSK-----KNIPQLLRDIIDEIIDSSTTYTL 529 + E ++ I ++ G + +P +L + +P+ + + +++ Sbjct: 468 NAEMINEYFSIHIDQDGK----LTRLPVVLDQYTPDMDRLPEFVLALGNDVTWDDEKECF 523 Query: 530 Q 530 + Sbjct: 524 R 524 >gi|115447025|ref|NP_001047292.1| Os02g0592300 [Oryza sativa Japonica Group] gi|50726475|dbj|BAD34084.1| putative PMS2 postmeiotic segregation increased 2 [Oryza sativa Japonica Group] gi|113536823|dbj|BAF09206.1| Os02g0592300 [Oryza sativa Japonica Group] gi|218191082|gb|EEC73509.1| hypothetical protein OsI_07875 [Oryza sativa Indica Group] gi|222623151|gb|EEE57283.1| hypothetical protein OsJ_07338 [Oryza sativa Japonica Group] Length = 923 Score = 241 bits (615), Expect = 3e-61, Method: Composition-based stats. Identities = 94/364 (25%), Positives = 158/364 (43%), Gaps = 17/364 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR + + +++I +G++I S A+KEL+ENSLDA ++ VE + G+ F + DNG G Sbjct: 9 IRPIGKSAVHRICSGQVIFDLSSAVKELVENSLDAGATTVEVTLRSYGEDSFTVADNGTG 68 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ +H TSKISD D +++ TFGFRGEAL S+ A+ LT+ +R G + Sbjct: 69 ISPTNFQALALKHHTSKISDFGDLASVATFGFRGEALSSLCALGKLTVETRTKDEPVGTR 128 Query: 121 IAISGEKISSVRPVAMNP-GTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + + + + P GT V V LF T+P R F ++ + E + ++ A+ Sbjct: 129 LEFAHSGVVTGERKMARPVGTAVTVEKLFSTLPVRSKEFSRNIRKEYGKVISLLNAYALI 188 Query: 179 YPKVS--FTFSTIKSNRYKMNFQSTNGNFPERISQVIG-EDFINNAVELNEKSNEITLQG 235 V T + K+++ + + + + I V G F S + G Sbjct: 189 AKGVRLVCTNTVGKNSKSAVLRTQGSSSLKDNIITVFGLNTFKCLQPFNVTISEGCQVDG 248 Query: 236 YTGI--PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 + P R + ++ + ++NGR V + + Y + +YPV VL I Sbjct: 249 FLSKPGPGSGRNSGDRQFFYVNGRPVDMPKVSKLVNELYRSS-NAKQYPVAVLNFCIPTT 307 Query: 294 QVDVNVHPAKSYIRFRNPTIIR-------NFIIQSIQKAINKKGISTSSVLSKKMISSFH 346 DVNV P K I F + I + Q + + + I Sbjct: 308 SYDVNVAPDKRKIFFSSEHAILLSLREGIENLYCPQQCSFSINSVEDPGKEMDPAIDGSD 367 Query: 347 QDNA 350 +D Sbjct: 368 EDMC 371 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 20/201 (9%) Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 + Q + +II + L IVDQHAA E+ FE + ST + Q LL Sbjct: 710 SKDDFGEMEVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFENL---SQSTTLNIQPLLQ 766 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKA-ERFGP---NAIAIREIPAILSKKNIPQLLRD 515 P +DL E ++ + + + G E N I+ +P + Q +++ Sbjct: 767 PLRLDLSPEEEVIVSMNMSTIRKNGFVLAEDLHASPCNRYFIKAVPFSKNITFGAQDVKE 826 Query: 516 IIDEIIDSSTTYTL-------------QDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 +I + DS ++ R+ +LA+ AC S G + EM ++L+ Sbjct: 827 LISMLADSQGDCSIISSYKLDRTDSICPSRVRAMLASRACRMSTMIGDPLTKTEMKKILK 886 Query: 563 EMEKNPNSSQCNHGRPTFIKL 583 + + C HGRPT L Sbjct: 887 NLTGLRSPWNCPHGRPTMRHL 907 >gi|146420678|ref|XP_001486293.1| hypothetical protein PGUG_01964 [Meyerozyma guilliermondii ATCC 6260] Length = 859 Score = 241 bits (615), Expect = 3e-61, Method: Composition-based stats. Identities = 89/467 (19%), Positives = 188/467 (40%), Gaps = 32/467 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ + + +I +G++I +KEL+EN++D+ S++++ + G + +I D+G Sbjct: 1 MPIKNIDSTEVQRITSGQVIVDLVSVVKELVENAIDSGSTKIDVTFSDSGLDYIKIEDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NT 117 G+ E+ RH TSK+ + + + T GFRGEA+ SI +V++LT+ + QN Sbjct: 61 SGIEEEDFEYVCLRHHTSKLVLFEGLAQVSTLGFRGEAMSSICSVANLTISTCTKQNYPR 120 Query: 118 GAQIAISGEK--ISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRR 174 +Q+ + + V GT+V V LF +P R K+ + E + + Sbjct: 121 ISQLTFDNMGRLTGTEKSVGGLRGTVVTVTSLFNALPVRRKTLEKNIKREFQKAVNNLIC 180 Query: 175 MAIAYPKVSFTFSTI----KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN- 229 + +P++ FT I K + + + V G + ++ ++ Sbjct: 181 YILIHPEIRFTVYNITAAKKKQMMLGTQGGSKADIKLCLLNVYGSNGTYGLELVSLEAKE 240 Query: 230 ------------------EITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIR 269 +I +G +F G + ++ Y+++N R V+ + + T+ Sbjct: 241 LEVKFKLNAGDLPVLKRLDIKFEGMISNCSFGMGRSAGDRQYIYLNKRPVESRRFIKTVN 300 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y ++PVVVL + +D +D+NV P K + N ++ + + + K + Sbjct: 301 EVYRSF-NTVQFPVVVLNIVLDGDFLDINVTPDKRTVMIHNEDVLNDVLRHELTKFYESE 359 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + S D A + + +SL + + T + + Sbjct: 360 DTQIPVNSDSWELPSQSIDRAKRKEDYEQPSSLKRYHLAEDEELDADDTRNTENELNDIG 419 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 + + E + + + T+ + ++ + +HE Sbjct: 420 ENVEEHKSQEEDQMEHDESYEEDSVNDREMIENTNNVDEMENNESHE 466 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 11/195 (5%) Query: 400 EATHYQLGIACAQIHQNYIISQTTDG--LVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + Q + +I+ G L IVDQHA+ E+ FE++ ++T SQ L Sbjct: 653 SKKDFTKMQVVGQFNLGFILVTLNGGNNLFIVDQHASDEKYNFERL--ANSTTMFHSQLL 710 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKNIPQLL 513 + P ++L + ++ + E G + + + + +P + + Sbjct: 711 VVPRNMELNALDEMTVLANLEVFKTNGFGLKVDEDEAPGHRVKLTSLPVLRTTVFDESDF 770 Query: 514 RDII---DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 ++I ++ + + +I ILA +C SI G+ + + M +++ + Sbjct: 771 HELIHLTNQAGSINNKHVKCSKIRTILALRSCRSSIMIGQPLSTSTMKKVVHNLSHLDKP 830 Query: 571 SQCNHGRPTFIKLKL 585 C HGRPT L Sbjct: 831 WNCPHGRPTMRHLTE 845 >gi|134056274|emb|CAK96402.1| unnamed protein product [Aspergillus niger] Length = 869 Score = 241 bits (615), Expect = 3e-61, Method: Composition-based stats. Identities = 90/405 (22%), Positives = 159/405 (39%), Gaps = 35/405 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L I+QI +G++I KEL+ENSLDA ++ +E G ++ DNG G Sbjct: 9 IHTLQ---IHQIQSGQVIVDLCSVAKELVENSLDAGATSIEIRFKNNGLDLIEVQDNGSG 65 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTGA 119 ++ + +H TSK+S +D + +HTFGFRGEAL S+ A+S + + Sbjct: 66 ISPDNYANVALKHYTSKLSSYEDLTTLHTFGFRGEALSSLCALSDFRITTAQANQAPKAT 125 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAI 177 ++ K+ + VA GT V +F +P R K+ + E + +++ A Sbjct: 126 RLDFEPSGKLKKTQIVAGQKGTTASVESIFKGLPVRRRELEKNIKREYGKVLNLLHAYAC 185 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNF--PERISQVIGEDF------------------ 217 V F+ + STNGN E I+ V G Sbjct: 186 VSTGVRFSVRNSVGKTKNVVVFSTNGNQTTKENIANVYGAKTLLALIPLDLALEFEPSAA 245 Query: 218 INNAVELNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + + + N++T++G+ P F R ++ F+N R I Y Sbjct: 246 AGRRITGSGELNKLTVRGHVSKPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYKSF 305 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS 335 + + P V +D DVNV P K I + + + + ++++ + S+ Sbjct: 306 -NVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIDSL----KESLVQLFESSDQ 360 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTND 380 + + ++ K L T + + + +D Sbjct: 361 TVPQSLVVGSKPAPTLKQRLGSLQTQTQSPNRPAVEDADSSAADD 405 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 94/259 (36%), Gaps = 33/259 (12%) Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-EATHYQLGIACAQ 412 L K + L QE L E + + + + + Q Sbjct: 569 SLSKIRSQLGQLQESLRRWEEHHGPSQSEDETAAPQETAEERLSLTVSKDDFANMRIVGQ 628 Query: 413 IHQNYIISQT------------TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 + +I++ D L I+DQHA+ E+ FE+++ T + +Q L+ P Sbjct: 629 FNLGFILATRSSTDDSGPGSSAKDELFIIDQHASDEKFNFERLQ---AETVVQNQRLVQP 685 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAE-------RFGPNAIAIREIPAILSKKNIPQLL 513 + +DL E +++E+ L + G E G + +P + L Sbjct: 686 KRLDLTAVEEEIVIENQAALEKNGFIVEVDESGDEPIGRRCKLV-SLPLSKEVVFGVRDL 744 Query: 514 RDIIDEIIDSSTTY---------TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 ++I + ++ T ++ + A AC SI G+ + +M ++++ M Sbjct: 745 EELIVLLSETPTNAARSATGMYIPRPSKVRKMFAMRACRSSIMIGKTLTVKQMQKVVQNM 804 Query: 565 EKNPNSSQCNHGRPTFIKL 583 C HGRPT L Sbjct: 805 GTIDKPWNCPHGRPTMRHL 823 >gi|332209584|ref|XP_003253894.1| PREDICTED: PMS1 protein homolog 1 isoform 3 [Nomascus leucogenys] Length = 770 Score = 241 bits (615), Expect = 3e-61, Method: Composition-based stats. Identities = 99/412 (24%), Positives = 178/412 (43%), Gaps = 33/412 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R +N Q Sbjct: 62 KAIDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P + F K+ ++ +S + + V+G +NN + + + ++I L G Sbjct: 182 LKPDLRIVFVHNKAVIWQ---KSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YP+ L Sbjct: 239 FLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPIFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSV 336 +++ VDVN+ P KS + +N + + + NK +S + + Sbjct: 299 IDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADI 358 Query: 337 LSKKMISS---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 + K + F++ + + TS+ Q + E+ + +D L Sbjct: 359 VLSKTAETDVLFNKMESSGKNYSNVDTSIIPFQNDMHNDESGKNADDCLKHQ 410 >gi|307128734|ref|YP_003880764.1| putative DNA mismatch repair protein MutL [Candidatus Sulcia muelleri CARI] gi|306483196|gb|ADM90066.1| putative DNA mismatch repair protein MutL [Candidatus Sulcia muelleri CARI] Length = 363 Score = 241 bits (614), Expect = 3e-61, Method: Composition-based stats. Identities = 88/336 (26%), Positives = 178/336 (52%), Gaps = 11/336 (3%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 M I+ LS+ + N+IA+G++I PS +KE++ENS+DA + ++ ++ GGK I D Sbjct: 1 MTDVIKFLSKNVSNKIASGDVIHNPSSILKEILENSIDAYAKNIKIILLNGGKDRIHIID 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 +G GM+ + + +R+ TSKI+ +D N+ T GFRGEAL I +V+ + + +R +++ Sbjct: 61 DGIGMSKNDAIKSFERYSTSKINKVEDLLNLSTKGFRGEALSYITSVTQIEMDTRYIESD 120 Query: 117 TGAQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 G ++ I K+ P+AM+ G + ++++F+ IP + FLKS +E I + ++ Sbjct: 121 IGIRLIIENGKLKYKPLPIAMDKGCSICIKNIFYNIPVKRKFLKSSNLELKNIINEFYKI 180 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 +++ ++F K + + + +RI ++ G+ +++ + +N + +QG Sbjct: 181 VLSHNDLNFILKNNKKIFFFLK----KSSHKKRIIKIFGKKIKKYLIKIKKTTNLVKIQG 236 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 Y + Y+F+N R +++K + + I +Y P + L +DP Sbjct: 237 YITNTKYFNLKK--QYIFLNKRFIKNKNLHNAIINSYEGLTKKKYNPSYFIFLTMDPSLF 294 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 ++N+ P K+ ++F + + N I I++ + I Sbjct: 295 NINISPYKTKVKFYDEIYLCNKISTLIKEYLGINNI 330 >gi|167525904|ref|XP_001747286.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774121|gb|EDQ87753.1| predicted protein [Monosiga brevicollis MX1] Length = 871 Score = 241 bits (614), Expect = 3e-61, Method: Composition-based stats. Identities = 83/381 (21%), Positives = 165/381 (43%), Gaps = 32/381 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R L +++I +G+++ +IA+KEL+EN+ DA +++++ I GK+ ++TDNG G+ Sbjct: 6 RALDAGSVHRICSGQVVLSLAIAVKELLENAADAHATKIDIKIREYGKTLIEVTDNGSGV 65 Query: 64 TSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 E +H TSK+ DD ++ TFGFRGEAL S+ A+S L++++ G + Sbjct: 66 HQENFEKIALKHYTSKLQDFDDLESVMTFGFRGEALSSLCAISELSVVTSDNDEGWGHAL 125 Query: 122 AISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLN-FLKSEQVETNLITDVIRRMAIAY 179 + + + S VA GT V +++LF T+P R F K+ + E + +++ + Sbjct: 126 VYNSDGVLVSQERVARERGTTVSIKNLFQTLPVRQQEFHKNCKREFAKLVQMLQAYCMVR 185 Query: 180 PKVSFTFSTI----KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--SNEITL 233 P ++F + I + + + + + + + G+ ++ V E ++ Sbjct: 186 PDIAFRLTHIPNAGSNRQSDLVRTNGDSTLEAVLRHIFGKKQLDALVPFTADVAETEWSI 245 Query: 234 QGYTGI--PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 +G+ P + +++ ++ IN R + + A+ + +YP +VL + + Sbjct: 246 KGFVSKPLPGCGKSASDRQFISINKRPCNLTKVARAVNDAFHT-LNKAQYPFLVLDITLH 304 Query: 292 -------------------PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 + VDVNV P K I + + + I + Sbjct: 305 AAAKVFGIFDELFSPPQMPTQSVDVNVTPDKRTILVQRENQLSDAIRAHMLTVFEPFAGH 364 Query: 333 TSSVLSKKMISSFHQDNAPKT 353 + KT Sbjct: 365 YGLNEQLAFLPDVPPSATAKT 385 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 135/386 (34%), Gaps = 20/386 (5%) Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 I E + G + A N R + Sbjct: 477 HAIVHASPEHNGGCCHGSGHELGRSPSTGPVSANELS--PAVFCCEVENCRKFAKPLGSA 534 Query: 267 TIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 + A+ + R+ V L + Q P + P ++ + + Sbjct: 535 ALLRAHY----MSRHRGVSLPAALTVEQAAPLPDPLLAR--LEEPAPVQETGYGDLPLVL 588 Query: 327 NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDD 386 +S+ + +++ + A + L + +S + + ++ S Sbjct: 589 TDASQEVTSLDAVAALATCPRPPARRVCLAQPLSSQSASSASSKEAPSQASQEASRAFHA 648 Query: 387 PTYSEDNDPVE-----ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 N+ E + + Q + +II++ L I+DQHA E+ FE Sbjct: 649 RIDRNANNAAEAELARQISKEDFLRMRIIGQFNLGFIIARLGRDLFIIDQHATDEKYNFE 708 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA---ERFGP-NAIAI 497 ++ STKI Q L+ + + L + +++H+E + G + E P + + Sbjct: 709 RL---SKSTKIQQQRLIQGKALRLPAVQEMTLIDHEEIFKQNGFEFVVDEGAPPTKKVKL 765 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 IP + + + +++ +++ + R+ +LA+ AC SI G+ ++ EM Sbjct: 766 TAIPHSKHVEFGQEDIEEMLALLLERPGVFVQPSRLRAMLASRACRSSIMVGKALKVAEM 825 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKL 583 +++ M + + C HGRPT L Sbjct: 826 AEVVQHMSQLEHPWNCPHGRPTMRHL 851 >gi|150404123|gb|ABR68375.1| DNA mismatch protein [Lactobacillus casei] gi|150404125|gb|ABR68376.1| DNA mismatch protein [Lactobacillus casei] gi|150404131|gb|ABR68379.1| DNA mismatch protein [Lactobacillus casei] gi|150404133|gb|ABR68380.1| DNA mismatch protein [Lactobacillus casei] gi|150404135|gb|ABR68381.1| DNA mismatch protein [Lactobacillus casei] gi|150404139|gb|ABR68383.1| DNA mismatch protein [Lactobacillus casei] gi|150404141|gb|ABR68384.1| DNA mismatch protein [Lactobacillus casei] gi|150404145|gb|ABR68386.1| DNA mismatch protein [Lactobacillus casei] gi|150404147|gb|ABR68387.1| DNA mismatch protein [Lactobacillus casei] gi|150404149|gb|ABR68388.1| DNA mismatch protein [Lactobacillus casei] gi|150404151|gb|ABR68389.1| DNA mismatch protein [Lactobacillus casei ATCC 334] gi|150404153|gb|ABR68390.1| DNA mismatch protein [Lactobacillus casei] gi|150404155|gb|ABR68391.1| DNA mismatch protein [Lactobacillus casei] gi|150404157|gb|ABR68392.1| DNA mismatch protein [Lactobacillus casei] gi|150404159|gb|ABR68393.1| DNA mismatch protein [Lactobacillus casei] gi|150404161|gb|ABR68394.1| DNA mismatch protein [Lactobacillus casei] gi|150404163|gb|ABR68395.1| DNA mismatch protein [Lactobacillus casei] gi|150404167|gb|ABR68397.1| DNA mismatch protein [Lactobacillus casei] gi|150404171|gb|ABR68399.1| DNA mismatch protein [Lactobacillus casei] gi|150404173|gb|ABR68400.1| DNA mismatch protein [Lactobacillus casei] gi|150404175|gb|ABR68401.1| DNA mismatch protein [Lactobacillus casei] gi|150404177|gb|ABR68402.1| DNA mismatch protein [Lactobacillus casei] gi|150404179|gb|ABR68403.1| DNA mismatch protein [Lactobacillus casei] gi|150404181|gb|ABR68404.1| DNA mismatch protein [Lactobacillus casei] gi|150404189|gb|ABR68408.1| DNA mismatch protein [Lactobacillus casei] gi|150404193|gb|ABR68410.1| DNA mismatch protein [Lactobacillus casei] gi|150404195|gb|ABR68411.1| DNA mismatch protein [Lactobacillus casei] gi|150404197|gb|ABR68412.1| DNA mismatch protein [Lactobacillus casei] gi|150404199|gb|ABR68413.1| DNA mismatch protein [Lactobacillus casei] Length = 249 Score = 241 bits (614), Expect = 3e-61, Method: Composition-based stats. Identities = 79/253 (31%), Positives = 140/253 (55%), Gaps = 6/253 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI--SDDFSN 86 EL+ENS+DA++++++ +I+ G +++DNG G+ +++ A RH TSKI + D N Sbjct: 1 ELVENSIDAQATQIDVLISAAGLQEIRVSDNGIGIAPDDVATAFLRHATSKILTTRDLFN 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRD 146 +H+ GFRGEAL SI AV+ + L + + G QI + G ++ + A GT VEV D Sbjct: 61 VHSLGFRGEALASIAAVADVKLTTAT-DSGIGTQIHVKGGEVEAQSTAAHRRGTDVEVND 119 Query: 147 LFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP 206 LFF PARL ++KS+Q E I D++ R+A+A P ++FT S + + + G+ Sbjct: 120 LFFNTPARLKYMKSQQTELGKIVDIVSRLAMANPDIAFTVSHDGNMVVR---TAGQGDLR 176 Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 + ++ + G + V+ + + + G T +P R + N + +NGR +++ + Sbjct: 177 QTLAGIYGLSVARSMVDFKAQDLDFRVSGLTSLPETTRASRNYLSLVVNGRYIKNFQLTK 236 Query: 267 TIRTAYAETIPLG 279 + Y + +G Sbjct: 237 AVIAGYGSKLMVG 249 >gi|328709516|ref|XP_001948119.2| PREDICTED: PMS1 protein homolog 1-like [Acyrthosiphon pisum] Length = 1023 Score = 241 bits (614), Expect = 3e-61, Method: Composition-based stats. Identities = 95/532 (17%), Positives = 200/532 (37%), Gaps = 29/532 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M +++L + I I++ ++I S +KEL+ENS+DA ++ ++ + G +I DNG Sbjct: 73 MSMKQLPSETIKLISSTQVITSASSVVKELMENSIDANATIIDIRLDNYGLDKIEIRDNG 132 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ ++ + R+ TSKIS+ D + +GFRGEAL SI AV+ +T++++ + Sbjct: 133 VGISHNDVYVMCLRNYTSKISEISDLGKLTYYGFRGEALSSICAVADVTVITKSDFDEYA 192 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVE---TNLITDVIRR 174 + ++ GT++++ +LF +P R S++ + ++++ Sbjct: 193 KSFTMDSNGRVKDSTICHHQKGTVIKIVNLFKKLPVRKQIYSSKKHCVNDLRRVENIVKS 252 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 +A V + KS ++M +I ++ + +E+ N T+ Sbjct: 253 LAAIQQNVRVSLVHNKSVLWQMTSAIDLTVTFGQIWSSSMTKYVKHLTFTSEEVNIDTVL 312 Query: 235 GY----TGIPTFNRGNANQFYVFINGRTVQDKFILSTI----RTAYAETIPLGRYPVVVL 286 F A+ Y+++N R V+D I I + +P G+Y ++ Sbjct: 313 PVQNINVQNCFFTTNVADAIYLYVNKRPVRDNKIEKLIVGEFNNYFGHYLPPGKYLPCLI 372 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH 346 + I P +D+N+ P KS I F N +I + I K + + S+ + Sbjct: 373 SITIPPETIDINLEPDKSRILFHNQDMILLNLKNCITKYYYNDKV-------ENDQSNIN 425 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 + + K Q K + + +P+ + T +N+ Sbjct: 426 EALVHPNNKRKIPCDSEEFQIKKSPILMSPANDSFIPNAESTKIINNESFNSVSNNDEHT 485 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 I ++ + + E E + + Sbjct: 486 QIVKELSLEDIDFEEPFISKKNKSDNKCLENDNVE--------STDDISEYRKKLLNIGS 537 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 + ++ + I ++ + + P LL + +D Sbjct: 538 TSSIQSDDTNVKNFNTEDISISQWSKGDVVLNGKPLESGVVLKSDLLLETLD 589 >gi|149612031|ref|XP_001507554.1| PREDICTED: similar to homolog of yeast mutL gene [Ornithorhynchus anatinus] Length = 871 Score = 241 bits (614), Expect = 4e-61, Method: Composition-based stats. Identities = 85/397 (21%), Positives = 171/397 (43%), Gaps = 26/397 (6%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ ++I + +KEL+ENSLDA ++ +E + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQVITSVASVVKELVENSLDAGATSIEVKLENYGLEKIEVRDNGQGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ RH TSKI +D + T+GFRGEAL S+ ++ + + ++ +N Q Sbjct: 62 RAVDAPVMAVRHYTSKISSHEDLDQLTTYGFRGEALGSVCCIAEVLITTKTAADNFSTQY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS---EQVETNLITDVIRRMAI 177 + +++ +P + GT V V LF +P R F + + E + ++ + Sbjct: 122 VLDSSGHVTAQKPSHLGQGTTVTVLRLFKNLPVRKQFFSTAQKRKEELKRVQSILMAYGL 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--SNEITLQG 235 P++ F+ K+ ++ +S + + ++G+ ++N + +E++L G Sbjct: 182 LKPQLRVVFTHNKAVVWQ---KSRVSDHKMALMSILGKAVMDNLAPFQYQSADSEMSLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAY---AETIPLGRYPVVVLL 287 + P + A + ++FIN R V+ + IL IR + YPV + Sbjct: 239 FLPKPDADHSVTSLSTAERSFLFINSRPVRQRDILKVIRQYCGRRGQKETTHLYPVFFVN 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK-------KGISTSSVLSKK 340 + + VDVN+ P KS + +N + + + S + Sbjct: 299 IVVPTASVDVNLTPDKSRVFLQNKESVLLAVETVLAGWYGPLPGACGADEASPDPLPDGA 358 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLS 377 + + D + P + L LQ R + Sbjct: 359 GLPAGPCDREGEPAGPPTPSELPRAGPGANLQTTRPA 395 >gi|317146967|ref|XP_001821792.2| DNA mismatch repair protein (Pms1) [Aspergillus oryzae RIB40] Length = 1071 Score = 241 bits (614), Expect = 4e-61, Method: Composition-based stats. Identities = 88/375 (23%), Positives = 153/375 (40%), Gaps = 33/375 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I KEL+ENSLDA ++ +E G ++ DNG Sbjct: 5 TIKAIEARSVHQIQSGQVIVDLCSVAKELVENSLDAGATSIEVRFKNNGLDLIEVQDNGS 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G++ E +H TSK+S +D S + TFGFRGEAL S+ A+S +++ Sbjct: 65 GISPENYENVALKHYTSKLSSYEDLSRLQTFGFRGEALSSLCALSEFHVVTAQANQAPKA 124 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ K+ + VA GT V V LF +P R K+ + E + +++ A Sbjct: 125 NRLDFEHSGKLKKTQIVAGQKGTTVSVEGLFKRLPVRRRELEKNIKREYGKVLNLLHAYA 184 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNF--PERISQVIGEDFINNAVE----------- 223 V F + + STNGN E I+ V G + + Sbjct: 185 CVSKGVRFNVKNTVAKTRNVVVFSTNGNQTTKENIANVYGAKTLLALIPLDLTLEFEPSA 244 Query: 224 --------LNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 +SN+I ++G+ P R ++ F+N R I Y Sbjct: 245 AGKRAAVDEERESNKIFVRGHISRPVSGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYK 304 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 + + P V +D DVNV P K I + + + + ++ + S+ Sbjct: 305 SF-NVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESL----KTSLTQLFESS 359 Query: 334 SSVLSKKMISSFHQD 348 + + +++ Q Sbjct: 360 DQTVPQSQVNNARQS 374 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 20/180 (11%) Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +++E+ Sbjct: 841 PPSSKDELFIIDQHASDEKFNFERLQ---AETVVQNQRLVQPKQLDLTAVEEEIVIENQS 897 Query: 479 DLHRLGIKAE-------RFGPNAIAIREIP----AILSKKNIPQLLRDIIDEIIDSSTTY 527 L + G E G + +P + +++ +L+ ++ E+ SST Sbjct: 898 ALEKNGFVVEVDDSGNEPIGRRCKLV-SLPLSKEVVFGVRDLEELIV-LLSEMPASSTAG 955 Query: 528 TL----QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + ++ + A AC SI G+ + +M R++R M C HGRPT L Sbjct: 956 PMYVPRPSKVRKMFAMRACRSSIMIGKNLSQKQMTRVVRNMGTIDKPWNCPHGRPTMRHL 1015 >gi|83769655|dbj|BAE59790.1| unnamed protein product [Aspergillus oryzae] Length = 866 Score = 241 bits (614), Expect = 4e-61, Method: Composition-based stats. Identities = 88/375 (23%), Positives = 153/375 (40%), Gaps = 33/375 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I KEL+ENSLDA ++ +E G ++ DNG Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVAKELVENSLDAGATSIEVRFKNNGLDLIEVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTG 118 G++ E +H TSK+S +D S + TFGFRGEAL S+ A+S +++ Sbjct: 63 GISPENYENVALKHYTSKLSSYEDLSRLQTFGFRGEALSSLCALSEFHVVTAQANQAPKA 122 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ K+ + VA GT V V LF +P R K+ + E + +++ A Sbjct: 123 NRLDFEHSGKLKKTQIVAGQKGTTVSVEGLFKRLPVRRRELEKNIKREYGKVLNLLHAYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNF--PERISQVIGEDFINNAVE----------- 223 V F + + STNGN E I+ V G + + Sbjct: 183 CVSKGVRFNVKNTVAKTRNVVVFSTNGNQTTKENIANVYGAKTLLALIPLDLTLEFEPSA 242 Query: 224 --------LNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 +SN+I ++G+ P R ++ F+N R I Y Sbjct: 243 AGKRAAVDEERESNKIFVRGHISRPVSGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYK 302 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 + + P V +D DVNV P K I + + + + ++ + S+ Sbjct: 303 SF-NVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESL----KTSLTQLFESS 357 Query: 334 SSVLSKKMISSFHQD 348 + + +++ Q Sbjct: 358 DQTVPQSQVNNARQS 372 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 20/180 (11%) Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +++E+ Sbjct: 682 PPSSKDELFIIDQHASDEKFNFERLQ---AETVVQNQRLVQPKQLDLTAVEEEIVIENQS 738 Query: 479 DLHRLGIKAE-------RFGPNAIAIREIP----AILSKKNIPQLLRDIIDEIIDSSTTY 527 L + G E G + +P + +++ +L+ ++ E+ SST Sbjct: 739 ALEKNGFVVEVDDSGNEPIGRRCKLV-SLPLSKEVVFGVRDLEELIV-LLSEMPASSTAG 796 Query: 528 TL----QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + ++ + A AC SI G+ + +M R++R M C HGRPT L Sbjct: 797 PMYVPRPSKVRKMFAMRACRSSIMIGKNLSQKQMTRVVRNMGTIDKPWNCPHGRPTMRHL 856 >gi|19173567|ref|NP_597370.1| DNA MISMATCH REPAIR PROTEIN (MUTL/HEXB FAMILY) [Encephalitozoon cuniculi GB-M1] gi|19170773|emb|CAD26547.1| DNA MISMATCH REPAIR PROTEIN (MUTL/HEXB FAMILY) [Encephalitozoon cuniculi GB-M1] Length = 563 Score = 240 bits (613), Expect = 4e-61, Method: Composition-based stats. Identities = 103/561 (18%), Positives = 234/561 (41%), Gaps = 46/561 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M+I++L +I++I+AGE+I RP +KE IENSLDA S+ + + G + + D+G Sbjct: 1 MEIKRLPSDVISRISAGEVITRPYNILKETIENSLDANSTHITIKMEQDGLTL-TVEDDG 59 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ + + +++CTSK++ ++ ++ ++GFRGEAL SI + + + S+ + G Sbjct: 60 DGIHESDFELLCKQYCTSKLTKEEELFSLSSYGFRGEALSSISRCARIKVRSKRREGEIG 119 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + ++ +++ V M GTIVE++++F+ R ++ E + ++ ++ Sbjct: 120 YEAVYRDTEMITIKGVGMKDGTIVEIKNIFYNNKVREKHFSKKREEIREMMWLVGMYSVF 179 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 ++SF + + + G + + + Sbjct: 180 NSRISFELFYGEKLQELPKSRVCVGEDGYSNEDRVKRKVGMLNELYKADGKLLFVSDKEY 239 Query: 239 IPTFN----RGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 + F+ +F+NGR V + + ++ Y + +P + P++ L L ++ Sbjct: 240 LVIFSTQQFCLRKGMLVLFVNGRLVVSQEMKESLFKVYKDILPPQKQPLIYLELYVEKSM 299 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVNVHP+K + F N + + + I + ++K +K + +D + ++ Sbjct: 300 VDVNVHPSKREVLFSNEESMTQRLCKCIAERLSKL------DYEQKPLKPLPKD-SFQSP 352 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 + Y+ + + + +E T + + S+ + + + T ++ Sbjct: 353 IKVYSDPTSQSIAECLEKE----TTERREFRLFSLSKLRLEIVDVDTTFFRSLSYVGVKD 408 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 ++ I+ Q L+ + +++ + DF + + L + + AL+ Sbjct: 409 RDTILVQHGSSLLNCKTVPLLKEYLYQSLINDFGN--FEKKRTLVRLRCKMDDKTRALLN 466 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIPAI---------------LSKKNIPQLLRDIIDE 519 ++ E + I IP I + + + + L++IID Sbjct: 467 DY--------FSIEVIEEH---IVGIPIISTICIDAPELWSGFEIRRSSEYETLKNIIDV 515 Query: 520 IIDSSTTYTLQDRIENILATM 540 + + + ++ NIL Sbjct: 516 VSTLYSGVEMSTKLFNILKRR 536 >gi|168067130|ref|XP_001785478.1| predicted protein [Physcomitrella patens subsp. patens] gi|162662920|gb|EDQ49719.1| predicted protein [Physcomitrella patens subsp. patens] Length = 742 Score = 240 bits (613), Expect = 4e-61, Method: Composition-based stats. Identities = 81/330 (24%), Positives = 151/330 (45%), Gaps = 14/330 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ + +++I +G+++ + A+KEL+ENSLDA ++ +E + G ++ DNG Sbjct: 8 KIQPIDRAAVHRICSGQVVLDLATAVKELVENSLDAGATSIEIRLKEYGSVLIEVADNGS 67 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E ++ TSKISD D + +FGFRGEAL S+ A+S +++ +R + GA Sbjct: 68 GVSPENYQGLTLKYHTSKISDFSDLQTLTSFGFRGEALSSLCALSDVSVTTRAKEEAIGA 127 Query: 120 QIAISGEKISSVRPVAMNP-GTIVEVRDLFFTIPARLNFLK-SEQVETNLITDVIRRMAI 177 ++ + S + GT V V +LF +P R K + + E + V++ A+ Sbjct: 128 RLTYDHSGVLSSQESVARAVGTTVAVANLFSPLPVRFKEFKRNIRREYGRLLSVLQAYAL 187 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 V + KS R + +G+ + I V G LN + + + Sbjct: 188 IAKGVRIFCTNQVGKSGRTTIVRTQGSGSVKDNIISVFGSKTAACLEPLNMEQSVGPGE- 246 Query: 236 YTGIPTFNRGNA-NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 + ++ ++++NGR V I + Y L + P+ L + P Sbjct: 247 -----WMTHRASGDRQFIYVNGRPVDLPKINKLLNELYGSFNSLQK-PMAFLNFILTPTA 300 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQK 324 DVNV P K + + + + ++++ Sbjct: 301 YDVNVTPDKRKVFLHTESALLTALKEALEC 330 Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 34/208 (16%) Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q + +++++ L IVDQHA+ E+ FE++ + K Q LL P ++L E Sbjct: 536 VGQFNLGFVLAKLDQDLFIVDQHASDEKYNFERLTKSTILNK---QPLLRPLSLELSAAE 592 Query: 470 CALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIP----AILSKKNIPQLLRDIIDEI 520 ++ H E + G G +++ +P ++ +L+ + + Sbjct: 593 EVIVTTHIETFRQNGFDFVENEDAPLGSR-LSLSAVPFSQNITFGIGDVQELVGILANGT 651 Query: 521 I-------------DSST------TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 + + + R+ +LA+ AC SI G + EM ++L Sbjct: 652 APVAKPSTTNGTGSQNGSQKGGLLSAIRPSRVRGMLASRACRSSIMIGDALCKKEMEKIL 711 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIE 589 + C HGRPT L +D+E Sbjct: 712 CHLADLDAPWNCPHGRPTMRHL--ADLE 737 >gi|150404169|gb|ABR68398.1| DNA mismatch protein [Lactobacillus casei] Length = 249 Score = 240 bits (613), Expect = 4e-61, Method: Composition-based stats. Identities = 80/253 (31%), Positives = 140/253 (55%), Gaps = 6/253 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI--SDDFSN 86 EL+ENS+DA++++++ +I+ G +++DNG G+ +++ A RH TSKI + D N Sbjct: 1 ELVENSIDAQATQIDVLISAAGLQEIRVSDNGIGIAPDDVATAFLRHATSKILTTRDLFN 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRD 146 +H+ GFRGEAL SI AV+ + L + + G QI + G ++ + A GT VEV D Sbjct: 61 VHSLGFRGEALASIAAVADVKLTTAT-DSGIGTQIHVKGGEVEAQSTAAHRRGTDVEVND 119 Query: 147 LFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP 206 LFF PARL ++KS+Q E I D++ R+AIA P ++FT S + + + G+ Sbjct: 120 LFFNTPARLKYMKSQQTELGKIVDIVSRLAIANPDIAFTVSHDGNMVVR---TAGQGDLR 176 Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 + ++ + G + V+ + + + G T +P R + N + +NGR +++ + Sbjct: 177 QTLAGIYGLSVARSMVDFKAQDLDFRVSGLTSLPETTRASRNYLSLVVNGRYIKNFQLTK 236 Query: 267 TIRTAYAETIPLG 279 + Y + +G Sbjct: 237 AVIAGYGSKLMVG 249 >gi|1709686|sp|P54279|PMS2_MOUSE RecName: Full=Mismatch repair endonuclease PMS2; AltName: Full=DNA mismatch repair protein PMS2; AltName: Full=PMS1 protein homolog 2 gi|896063|gb|AAA87031.1| PMS2 [Mus musculus] Length = 859 Score = 240 bits (613), Expect = 5e-61, Method: Composition-based stats. Identities = 92/403 (22%), Positives = 174/403 (43%), Gaps = 27/403 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G++I S A+KELIENS+DA ++ ++ + G +++DNG G Sbjct: 15 IKPIDGKSVHQICSGQVILSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + + G + Sbjct: 75 VEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHGSASVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI+ P GT V V+ LF+T+P R F ++ + E + + V++ I Sbjct: 135 LVFDHNGKITQKTPYPRPKGTTVSVQHLFYTLPVRYKEFQRNIKKEYSKMVQVLQAYCII 194 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE--KSNEITLQ 234 V + + + R+ + S E I V G+ + + + + S+ + + Sbjct: 195 SAGVRVSCTNQLGQGKRHAVVCTSGTSGMKENIGSVFGQKQLQSLIPFVQLPPSDAVCEE 254 Query: 235 GYTGIPTFNRGNANQFYVFINGRT-----VQDKFILSTIR------------TAYAETIP 277 ++ + F + RT Q S+IR + Sbjct: 255 YGLSTSGRHKTFSTFRASFHSARTAPGGVQQTGSFSSSIRGPVTQQRSLSLSMRFYHMYN 314 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--ISTSS 335 +YP VVL + +D VD+NV P K I + ++ + S+ + ++ + Sbjct: 315 RHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDANKLNVNQ 374 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 + + + + + P + K E R+++ Sbjct: 375 QPLLDVEGNLVKLHTAELEKPVPGKQDNSPSLKSTADEKRVAS 417 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 9/190 (4%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + + Q + +I+++ + L +VDQHAA E+ FE ++Q T + +Q L Sbjct: 664 EISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQH---TVLQAQRL 720 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQL 512 +TP+ ++L A+++E+ E + G A I +P + PQ Sbjct: 721 ITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLI-SLPTSKNWTFGPQD 779 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + ++I + DS R+ + A+ AC S+ G + + EM +L+ M + + Sbjct: 780 IDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNASEMKKLITHMGEMDHPWN 839 Query: 573 CNHGRPTFIK 582 C HGRPT Sbjct: 840 CPHGRPTMRH 849 >gi|150404127|gb|ABR68377.1| DNA mismatch protein [Lactobacillus casei] Length = 249 Score = 240 bits (613), Expect = 5e-61, Method: Composition-based stats. Identities = 78/253 (30%), Positives = 140/253 (55%), Gaps = 6/253 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI--SDDFSN 86 EL+ENS+DA++++++ +I+ G +++DNG G+ +++ A RH TSKI + D N Sbjct: 1 ELVENSIDAQATQIDVLISAAGLQEIRVSDNGIGIAPDDVATAFLRHATSKILTTRDLFN 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRD 146 +H+ GFRGEAL SI AV+ + + + + G QI + G ++ + A GT VEV D Sbjct: 61 VHSLGFRGEALASIAAVADVKVTTAT-DSGIGTQIHVKGGEVEAQSTAAHRRGTDVEVND 119 Query: 147 LFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP 206 LFF PARL ++KS+Q E I D++ R+A+A P ++FT S + + + G+ Sbjct: 120 LFFNTPARLKYMKSQQTELGKIVDIVSRLAMANPDIAFTVSHDGNMVVR---TAGQGDLR 176 Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 + ++ + G + V+ + + + G T +P R + N + +NGR +++ + Sbjct: 177 QTLAGIYGLSVARSMVDFKAQDLDFRVSGLTSLPETTRASRNYLSLVVNGRYIKNFQLTK 236 Query: 267 TIRTAYAETIPLG 279 + Y + +G Sbjct: 237 AVIAGYGSKLMVG 249 >gi|332209580|ref|XP_003253892.1| PREDICTED: PMS1 protein homolog 1 isoform 1 [Nomascus leucogenys] Length = 930 Score = 240 bits (613), Expect = 5e-61, Method: Composition-based stats. Identities = 99/412 (24%), Positives = 178/412 (43%), Gaps = 33/412 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R +N Q Sbjct: 62 KAIDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P + F K+ ++ +S + + V+G +NN + + + ++I L G Sbjct: 182 LKPDLRIVFVHNKAVIWQ---KSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YP+ L Sbjct: 239 FLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPIFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSV 336 +++ VDVN+ P KS + +N + + + NK +S + + Sbjct: 299 IDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADI 358 Query: 337 LSKKMISS---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 + K + F++ + + TS+ Q + E+ + +D L Sbjct: 359 VLSKTAETDVLFNKMESSGKNYSNVDTSIIPFQNDMHNDESGKNADDCLKHQ 410 >gi|332814960|ref|XP_515987.3| PREDICTED: PMS1 protein homolog 1 isoform 3 [Pan troglodytes] Length = 932 Score = 240 bits (612), Expect = 5e-61, Method: Composition-based stats. Identities = 107/460 (23%), Positives = 192/460 (41%), Gaps = 37/460 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + +I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGRILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P + F K+ ++ +S + + V+G +NN + + + ++I L G Sbjct: 182 LKPDLRIVFVHNKAVIWQ---KSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YPV L Sbjct: 239 FLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSV 336 +++ VDVN+ P KS + +N + + + NK +S + + Sbjct: 299 IDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADI 358 Query: 337 LSKKMISS---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTY 389 + K + F++ + + TS+ Q + E+ +T+D L D Y Sbjct: 359 VLSKTAETDVLFNKVESSGKNYSNVDTSIIPFQNDMHNDESGKNTDDCLNHQISIGDFGY 418 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + + ++ SQT Sbjct: 419 GHCSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCF 458 Score = 38.5 bits (88), Expect = 3.1, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 103/301 (34%), Gaps = 29/301 (9%) Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 R + ++ I Q Q ++ + + H+ ++ PK L + EK Sbjct: 630 RYNSQMKRAIEQESQMSLKDGRKKIKPTSAWNLAQK-HKLKTSLSNQPKLDELLQSQIEK 688 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 Q ++ + + + V+ E L + + + +++ Sbjct: 689 RRSQNIKMVQIPFSMKNLKINFKKQNKVDLEEKDEPCLIHNLR--FPDAWLMTSKTEVML 746 Query: 429 VDQHAAHERLIFEKMRQDFN--STKITSQTLLTPEIIDLLEGECALIMEHDED------- 479 ++ + E L+F+++ ++ + + +LT + + L +D Sbjct: 747 LNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTESLFNGSHYLDVLYKMTADDQRYSGST 806 Query: 480 ------LHRLGIKAE-----RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 L G K + N + I + L + L ++I++ I++ + Sbjct: 807 YLSDPRLTANGFKIKLIPGVSITENYLEIEGMANCLPFYGVADL-KEILNAILNRNAKEV 865 Query: 529 LQDRIENILATM---ACYGSIRSGRKMQSIEMNRLLREMEK--NPNSSQCNHGRPTFIKL 583 + R +++ + A S + + ++ ++ M+ +C HGRP F L Sbjct: 866 YECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDIIYRMKHQFGNEIKECVHGRPFFHHL 925 Query: 584 K 584 Sbjct: 926 T 926 >gi|149730794|ref|XP_001502013.1| PREDICTED: similar to postmeiotic segregation 1 isoform 1 [Equus caballus] Length = 931 Score = 240 bits (612), Expect = 5e-61, Method: Composition-based stats. Identities = 99/439 (22%), Positives = 185/439 (42%), Gaps = 33/439 (7%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENFGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI V+ +++++R +N Q Sbjct: 62 KAIDAPVMAIKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVSIITRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E + D++ I Sbjct: 122 VLDGSGHIISQKPSHLGQGTTVTALKLFKNLPVRKQFYSTAKKCKDEIKKVQDLLISYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P + F K+ ++ ++ + + V+G + N V+ + + ++I L G Sbjct: 182 LKPDLRIVFVHNKAVIWQ---KTRVSDHKMALMSVLGTAVMGNMESVQYHSEESQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YP+ L Sbjct: 239 FLPKHDADHSFTSLSTPERSFIFINNRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTII-----------RNFIIQSIQKAINKKGISTSSV 336 +++ VDVN+ P KS + +N I + + N+ +S++ Sbjct: 299 IDVPTADVDVNLTPDKSQVLLQNKESILIALENLLTTCYGSLPSTNSYENNETDVSSADT 358 Query: 337 LSKKMISS---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 + K + F++ + + P T Q + E+ +TN + Sbjct: 359 VVSKTAETDVLFNKMESSGNNYPNVDTLAIPFQNDVHNDESVKNTNYCSDPQLHVDDHYD 418 Query: 394 DPVEESEATHYQLGIACAQ 412 D +++ + Q Sbjct: 419 DHFSSEDSSIVKNTRNLFQ 437 >gi|198437487|ref|XP_002125934.1| PREDICTED: similar to DNA mismatch repair protein Mlh3 (MutL protein homolog 3) [Ciona intestinalis] Length = 692 Score = 240 bits (612), Expect = 5e-61, Method: Composition-based stats. Identities = 123/656 (18%), Positives = 241/656 (36%), Gaps = 81/656 (12%) Query: 7 SEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSE 66 + +Q+ +G I S ++ELI NS+DA + + + K + Q+TDNG G + Sbjct: 14 PATVQSQLRSGVAITSVSQCVEELIANSIDANAKTIGIFVDL-KKYYVQVTDNGCGFSKY 72 Query: 67 EIPMAVQRHCTSKISDD---FSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIA 122 + + +R+ TSK D N+ +G+RGEAL S+ +S ++++++ + + Sbjct: 73 NLFKSARRYATSKCPDSENFKFNLAHYGYRGEALASMAELSSNVSIITCMKGDGSPYSKT 132 Query: 123 IS-----GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 IS I + G+ V V LF +P R ++ + +E I + +A+ Sbjct: 133 ISSFGTKHSDIQTHVATKQQQGSTVTVSGLFSNMPVRRKYMDDD-IEAEQIRKTVCNLAL 191 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVI-GEDFINNAVELNEKSNEITLQGY 236 + +V+FT + ++S ++T+ + + G + + N V + ++ Sbjct: 192 SNLEVTFTLNVLESAHTLRLSRTTDPLIRSSLKCLCNGRNHLANNVSFRLNTIHDSVASQ 251 Query: 237 TGIPTFNRGNANQFYVF---INGRTVQDKFILSTIRTAYAET---IPLGRYPVVVLLLEI 290 + R +++ R Y + G+ V Sbjct: 252 NFQTISTTNGKLHIDAYLSETGHRNKSIQYVYVNRRCPYKWYDISLAPGKTMVEFRNWNF 311 Query: 291 DPRQVDVNVHPAKSYIRFRNPTI------------------IRNFIIQSIQKAINKKGIS 332 V AK+ T + + + + S Sbjct: 312 ILSAVRKLFCKAKNIPWISVETPANFKSESMDINTATDLVCVMGRAVGTTRPCDFTNAKS 371 Query: 333 TSSVLSKKMISSF-HQDNAPKTHLPK--------YATSLTNTQEKLFLQENRLSTNDLLP 383 TS + F QD T LPK S T LQ + + +P Sbjct: 372 TSPNGNTTQNCPFTEQDQNKHTELPKGIGLNKVLVPISKTPRLSANLLQSTQKTVKKPMP 431 Query: 384 SDDPTYSEDNDPVEESEATHYQL-----------------GIACAQIHQNYIISQ----- 421 S P +++ H Q +I Sbjct: 432 SVRVDNVTVFRPQQQNTTAHPTFFQGIYTEVKLTKEVLTKLKVIGQFGNKFIACSVGCTT 491 Query: 422 -TTDGLVIVDQHAAHERLIFEKMRQDFNSTK----ITSQTLLTPEIIDLLEGECALIMEH 476 + L++VDQHAAHER+ E D + + + L + I+L + + A + H Sbjct: 492 DSRGMLLLVDQHAAHERVRLESFISDAYESSKRINLKTSKLESKVEINLTKTQTAAVRNH 551 Query: 477 DEDLHRLGIKAER---FGPNAIAIREIPAILS-KKNIPQLLRDIIDE-----IIDSSTTY 527 E + G++ + + + + IP++L+ + + + ++I+E ++ + Sbjct: 552 PEVFYTCGLRFDSDLNTEDDLVTVNSIPSLLTTSGTLKETIENLIEERTQALYVNRGVSD 611 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ + +L + AC+G+IR G + + LL + K QC HGRP+ + L Sbjct: 612 SMSPVLFQLLCSKACHGAIRFGDPLALEQCTELLTALSKCDFPFQCAHGRPSVMPL 667 >gi|57110873|ref|XP_536002.1| PREDICTED: similar to PMS1 protein homolog 1 (DNA mismatch repair protein PMS1) isoform 1 [Canis familiaris] Length = 930 Score = 240 bits (612), Expect = 5e-61, Method: Composition-based stats. Identities = 104/523 (19%), Positives = 208/523 (39%), Gaps = 47/523 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KEL+ENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELLENSLDAGATSIDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R +N Q Sbjct: 62 KAIDAPVMAVKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTASDNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V V LF +P R F K + E + D++ I Sbjct: 122 VLDGSGHIISQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTAKKCKDEIKKVQDLLISYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE--LNEKSNEITLQG 235 P++ F K+ ++ ++ + + V+G + N + + ++I L G Sbjct: 182 LKPELRIVFIHNKAVIWQ---KTRVSDRQVALRAVLGTAVMGNMEPFQYHPEDSQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YP+ L Sbjct: 239 FLPKHDVDHSSTSLSTPERSFIFINNRPVHQKDILKLIRHYYNLKCLKEASRLYPIFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS--- 344 +++ VDVN+ P KS + +N + + + + S +K +SS Sbjct: 299 IDVPTADVDVNITPDKSQVLIQNKEAVLIALENLMTTCYGSLPSTNSYENNKTDVSSADM 358 Query: 345 -----------FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 F++ + + P TS Q + ++ +TN L + + Sbjct: 359 VVSNTTETDVLFNKMESSGNNYPNVDTSAIPFQNDVCNDKSGKNTNYCLNNQINVDDHCD 418 Query: 394 DPVEESEATHYQLGIACAQ------IHQNYIISQTTDGLVIVD-QHAAHERLIFEKMRQD 446 D + + + Q + + ++ +V +H E + + Sbjct: 419 DHFNSENSNIDKNTRSIFQEIPMNNLSCEDAQKECSETCFVVSVKHTQSENGN----KSN 474 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 + + + + + +++ + + + +G E Sbjct: 475 RDENRKNEEGAVPEKPLEISADDWSKGNTLK---NSMGENIEP 514 >gi|221128371|ref|XP_002165510.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 790 Score = 240 bits (612), Expect = 6e-61, Method: Composition-based stats. Identities = 86/353 (24%), Positives = 156/353 (44%), Gaps = 29/353 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + + I+ I +G+++ + A+KEL+ENSLDA +E + GK + +++DNG G Sbjct: 11 IQPIDQSSIHHICSGQVVLDLATAVKELVENSLDANGKIIEIRLKEYGKEYIEVSDNGDG 70 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + + +H TSK+ + D + + TFGFRGEAL S+ A++ + + + +N G + Sbjct: 71 IEENDFESLCLKHYTSKLKEFSDLTFVSTFGFRGEALSSLSALADVVVSTHSKTSNVGYK 130 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + K+ +A GT V V +LF+T+P R F + + E + + V+ ++ Sbjct: 131 LEFDHSGKLVKNTSIARATGTTVTVTNLFYTLPVRYKEFHFNIKKEFSKLIQVLYAYSLI 190 Query: 179 YPKVSFTFSTI-KSNRYKMNFQSTNGNFPERISQVIGE-------------DFINNAVEL 224 V F+ + + + N N P IS + GE F N+ +E Sbjct: 191 NNGVRFSCINQVGNKKKVLLSTDGNKNVPSIISGIFGETQTKQLLKIEQISKFDNSVLEE 250 Query: 225 NEKSNEITLQ--------GYTG--IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAE 274 +Q G+ R ++ ++FIN R +L I Y Sbjct: 251 YNLPTSFVIQFDGHFTLNGFISATDHGSGRNLPDRQFIFINNRPCDFTKLLRVINEVYHT 310 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 +YP + L + VDVN+ P K I + ++ F+ +++ Sbjct: 311 Y-NRHQYPFIYLNVLARKDCVDVNITPNKRQIMVQEEKVLLAFVKSTLKCMFE 362 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 53/280 (18%), Positives = 108/280 (38%), Gaps = 13/280 (4%) Query: 314 IRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE 373 + + I +N + + IS + K K + + K + Q Sbjct: 505 LSDNIKHKFTDTLNTLANKSVNADDILDISVVENNYKKKVDQDKIVATFDFSMLKEYYQR 564 Query: 374 NRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ------LGIACAQIHQNYIISQTTDGLV 427 + + + + ++ E E T + Q + +II++ + L Sbjct: 565 HTVCEQNTSTLFHAKINPSHNSAAEEELTKHVSKDMFAKMEIVGQFNLGFIITKYEENLF 624 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 I+DQHA E+ FE +++ Q L+ P ++L ++++++ + G + Sbjct: 625 IIDQHATDEKYNFETLQKKHVLKG---QRLIEPISMELTLVNESILIDNINIFKKNGFEF 681 Query: 488 ----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY 543 E+ G + I + +P L+ + ++I + DS R+ + A+ AC Sbjct: 682 KIDYEQTGNSKIKLLTVPTSLNSSFSVSDVEELIFMLNDSPGVMCRPSRVRQMFASKACR 741 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 S+ G + M RL++ M + + C HGRPT L Sbjct: 742 SSVMVGTALDHFMMKRLVQHMGEIEHPWNCPHGRPTMRHL 781 >gi|295099688|emb|CBK88777.1| DNA mismatch repair enzyme (predicted ATPase) [Eubacterium cylindroides T2-87] Length = 251 Score = 240 bits (612), Expect = 6e-61, Method: Composition-based stats. Identities = 85/235 (36%), Positives = 127/235 (54%), Gaps = 7/235 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI LSE + N IAAGE++ERP+ +KE +ENS+DA++ +E GG ITD+G Sbjct: 3 KIHVLSEHLTNMIAAGEVVERPAGIVKECVENSIDAKAKTIEIEAFQGGIERLIITDDGI 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM E+ +A RH TSK+ +D NIHT GFRGEALPSI +V+ + L + +N Sbjct: 63 GMDKEDAHLAFMRHATSKMHSEEDLFNIHTMGFRGEALPSIASVAKVELNT--NDSNEST 120 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I S ++ + GT +++ LF PAR LKS E ++I D++ +MA+++ Sbjct: 121 LIRYSYGELICEESSSCPRGTKIDISGLFVKTPARFKHLKSPSYEFSVIADIVNKMALSH 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 P++ F S ++ S NG E + Q+ G + NAV K + Sbjct: 181 PEIRFKLSHDGRVVFQ---TSGNGKIQEILYQMYGREVAENAVYFEGKMMILRFM 232 >gi|64653335|gb|AAH96331.1| PMS1 protein [Homo sapiens] Length = 669 Score = 240 bits (612), Expect = 6e-61, Method: Composition-based stats. Identities = 106/460 (23%), Positives = 191/460 (41%), Gaps = 37/460 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P + F K+ ++ +S + + V+G +NN + + + ++I L G Sbjct: 182 LKPDLRIVFVHNKAVIWQ---KSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YPV L Sbjct: 239 FLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSV 336 +++ VDVN+ P KS + +N + + + NK +S + + Sbjct: 299 IDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADI 358 Query: 337 LSKKMISS---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTY 389 + K + F++ + + TS+ Q + E+ +T+D L D Y Sbjct: 359 VLSKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGY 418 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + + ++ SQT Sbjct: 419 GHCSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCF 458 >gi|205375648|ref|ZP_03228435.1| DNA mismatch repair protein [Bacillus coahuilensis m4-4] Length = 123 Score = 239 bits (611), Expect = 8e-61, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 81/122 (66%), Gaps = 2/122 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 1 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A+ RH TSKI+ DD I + GFRGEAL SI +VS LTL SR + Sbjct: 61 CGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEA 120 Query: 119 AQ 120 Q Sbjct: 121 WQ 122 >gi|150404183|gb|ABR68405.1| DNA mismatch protein [Lactobacillus casei] Length = 249 Score = 239 bits (611), Expect = 8e-61, Method: Composition-based stats. Identities = 79/253 (31%), Positives = 140/253 (55%), Gaps = 6/253 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI--SDDFSN 86 EL+ENS+DA++++++ +I+ G +++DNG G+ +++ A RH TSKI + D N Sbjct: 1 ELVENSIDAQATQIDVLISAAGLQEIRVSDNGIGIAPDDVATAFLRHATSKILTTRDLFN 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRD 146 +H+ GFRGEAL SI AV+ + L + + G QI + G ++ + A GT VEV D Sbjct: 61 VHSLGFRGEALASIAAVADVKLTTAT-DSGIGTQIHVKGGEVEAQSTAAHRRGTDVEVND 119 Query: 147 LFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP 206 LFF PARL ++KS+Q E I D++ R+A+A P ++FT S + + + G+ Sbjct: 120 LFFNTPARLKYMKSQQTELGKIVDIVSRLAMANPDIAFTVSHDSNMVVR---TAGQGDLR 176 Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 + ++ + G + V+ + + + G T +P R + N + +NGR +++ + Sbjct: 177 QTLAGIYGLSVARSMVDFKAQDLDFRVSGLTSLPETTRASRNYLSLVVNGRYIKNFQLTK 236 Query: 267 TIRTAYAETIPLG 279 + Y + +G Sbjct: 237 AVIAGYGSKLMVG 249 >gi|150404185|gb|ABR68406.1| DNA mismatch protein [Lactobacillus casei] Length = 249 Score = 239 bits (611), Expect = 8e-61, Method: Composition-based stats. Identities = 79/253 (31%), Positives = 140/253 (55%), Gaps = 6/253 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI--SDDFSN 86 EL+ENS+DA++++++ +I+ G +++DNG G+ +++ A RH TSKI + D N Sbjct: 1 ELVENSIDAQATQIDVLISAAGLQEIRVSDNGIGIAPDDVATAFLRHATSKILTTRDLFN 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRD 146 +H+ GFRGEAL SI AV+ + L + + G QI + G ++ + A GT VEV D Sbjct: 61 VHSLGFRGEALASIAAVADVKLTTAT-DSGIGTQIHVKGGEVEAQSTAAHRRGTDVEVND 119 Query: 147 LFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP 206 LFF PARL ++KS+Q E I D++ R+A+A P ++FT S + + + G+ Sbjct: 120 LFFNTPARLKYMKSQQTELGKIVDIVSRLAMANPDIAFTVSHDGNMVVR---TAGQGDLR 176 Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 + ++ + G + V+ + + + G T +P R + N + +NGR +++ + Sbjct: 177 QTLAGIYGLSVARSMVDFKAQDLDFRVSGLTSLPETTRASHNYLSLVVNGRYIKNFQLTK 236 Query: 267 TIRTAYAETIPLG 279 + Y + +G Sbjct: 237 AVIAGYGSKLMVG 249 >gi|282889889|ref|ZP_06298427.1| hypothetical protein pah_c005o023 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500212|gb|EFB42493.1| hypothetical protein pah_c005o023 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 469 Score = 239 bits (610), Expect = 9e-61, Method: Composition-based stats. Identities = 113/468 (24%), Positives = 204/468 (43%), Gaps = 19/468 (4%) Query: 142 VEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMN---- 197 +E++ LFF +P R F KS + N I ++ A+A+P + F + K Sbjct: 1 MEIKSLFFNVPVRRKFQKSPTYDANEILKILTMQALAHPDIQFELISNHETLLKTPTSKQ 60 Query: 198 FQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGR 257 S +RI V+G D + + + GY G P+ +R N ++FIN R Sbjct: 61 PASFAEKLSDRIGSVLGHDLAQEICFIEGEKEGCKITGYIGFPSASRPNRACQFLFINQR 120 Query: 258 TVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 TV I +R Y + R+P+ +L L + VDVNVHP K +R R +I+ Sbjct: 121 TVTSPAISFAVREGYGTALATNRHPLFILHLSLPGTLVDVNVHPQKKEVRLRQEAMIKEL 180 Query: 318 IIQSIQKAINKKGISTSSV--LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENR 375 II ++QKA+ + ++ + + + + + + + + + L+E Sbjct: 181 IISAVQKALYPHEVESTPIHFAEPPIFTPAFDEKSDFQPSTSFGSFGGHFFDHSLLEELA 240 Query: 376 LSTNDLLPSDDPTYSEDNDPVEESEATHYQL----------GIACAQIHQNY-IISQTTD 424 T S DP +++ + E Q G + + Q Sbjct: 241 NPTPYPQRSFDPPKTQEEFQLPEQLPLPPQKNVPLVLTTIKGFILTHYTNAFPMTKQEEI 300 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 G+ ++DQ AAH R++FE+++ S + QTLL P I+ E AL+ EH + + +G Sbjct: 301 GIGLIDQRAAHFRILFEQLQS--ASPTFSIQTLLIPYTIETTPLEAALLKEHLMEFNAMG 358 Query: 485 IKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYG 544 I+ + FG I IP++ +I + ++I + + + + L+ + LA +A Sbjct: 359 IQIKEFGSTTFTIDGIPSLFGNSDITYFVDELIKTLAEMNQSSALKKEKDKCLAQIASKA 418 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 +IR + +E L+R++ + + C G+P I L +I + F Sbjct: 419 AIRKEHILSLLEAQNLVRQLWECQSPLYCPFGKPIAIHLSREEIARQF 466 >gi|39952147|ref|XP_363790.1| hypothetical protein MGG_01716 [Magnaporthe oryzae 70-15] gi|145020440|gb|EDK04569.1| hypothetical protein MGG_01716 [Magnaporthe oryzae 70-15] Length = 1111 Score = 239 bits (610), Expect = 1e-60, Method: Composition-based stats. Identities = 88/379 (23%), Positives = 157/379 (41%), Gaps = 35/379 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + +++QI +G++I KELIENSLDA ++ ++ G ++ DNG Sbjct: 6 TIKAIEAGVVHQIQSGQVIVDLCSVAKELIENSLDAGATAIDVRFKNQGLDSIEVQDNGC 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSR-PPQNNTG 118 G+ + +H TSK+S D +HTFGFRGEAL S+ A+SH T+ + G Sbjct: 66 GIAPQNYASVALKHYTSKLSSFADLDTLHTFGFRGEALSSLCALSHFTVTTCLQSDVPRG 125 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ K+ S VA GT+V V LF +P R ++ + E + +++ + A Sbjct: 126 TKLEFEVSGKLKSTSLVAAQKGTVVTVETLFHNLPVRRRELERNIKREWGKVINLLNQYA 185 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNF--PERISQVIGEDF----------------- 217 + FT S + + ST GN E I V G Sbjct: 186 CIQTGIKFTVSQQPTKGKRTVLFSTKGNKSTRENIVNVFGAKTLSALIAMELELELEPTT 245 Query: 218 ------INNAVELNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIR 269 + ++ + ++G+ P R ++ ++NGR Sbjct: 246 SKVTAAATGSTRHQGETTTVFVRGHVSRPARGEGRQTPDRQMFYVNGRPCILPQFAKVFN 305 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + P + +++D DVNV P K I + + + + +++ + K+ Sbjct: 306 EVYKTYNST-QSPFIFADIQLDTHLYDVNVSPDKRSILLHDQGRMLDNMREALIELFEKQ 364 Query: 330 G--ISTSSVLSKKMISSFH 346 I S ++++K + F Sbjct: 365 DITIPVSQLITQKPTTPFK 383 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%) Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 D L I+DQHA+ E+ FE+++ ST + SQ L+ P+ ++L E +I+E+ + L Sbjct: 906 DELFIIDQHASDEKYNFERLQ---ASTVVESQRLVRPKPLELTALEEEIIIENQKALETN 962 Query: 484 GI--KAERFGPNAI----AIREIP----AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 G + G + + + +P S ++ +L+ + D ++TT R+ Sbjct: 963 GFIVDVDESGESPVGSRCRLLSLPLSRETTFSLTDLEELVSLLADNPTTTATTVPRPSRV 1022 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + A AC S+ GR + +M +++R M C HGRPT L Sbjct: 1023 RKMFAMRACRSSVMVGRALSQPQMEKVVRHMGGMEKPWNCPHGRPTMRHL 1072 >gi|197103034|ref|NP_001126019.1| PMS1 protein homolog 1 [Pongo abelii] gi|55730063|emb|CAH91756.1| hypothetical protein [Pongo abelii] Length = 931 Score = 239 bits (610), Expect = 1e-60, Method: Composition-based stats. Identities = 103/460 (22%), Positives = 191/460 (41%), Gaps = 37/460 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R +N Q Sbjct: 62 KAVDTPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLAQGTTVTALRLFRNLPVRKQFYSTAKKCKDEIKKIQDLLMSYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P + F K+ ++ +S + + V+G ++N + + + ++I L G Sbjct: 182 LKPDLRIVFVHNKAVIWQ---KSRVSDHKMALMSVLGTAVMSNMESFQYHSEESQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YPV L Sbjct: 239 FLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTII-----------RNFIIQSIQKAINKKGISTSSV 336 +++ VDVN+ P KS + +N + ++ + NK +S + + Sbjct: 299 IDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLLSTNSYENNKTDVSAADI 358 Query: 337 LSKKMISS---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTY 389 + K + F++ + + TS+ Q + E+ + +D L D Y Sbjct: 359 VLSKTAETDVLFNKMESSGKNYSNVDTSIIPFQNDMHNDESGKNNDDCLNHQISIGDFGY 418 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + + ++ +QT Sbjct: 419 GHCSSEISNVDKNTKNAFQDISMSNVSWENTQTEYSKTCF 458 Score = 38.9 bits (89), Expect = 2.8, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 103/292 (35%), Gaps = 30/292 (10%) Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 +++AI ++ + KK+ + + A K L ++ E L Q + S N Sbjct: 635 MKRAIEQESQISLKDGRKKIKPTSAWNLAQKHKLKTSLSNQPKLDELLQSQIEKRSQNIK 694 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIH----QNYIISQTTDGLVIVDQHAAHER 437 + + ++ + + IH + + + +++++ + E Sbjct: 695 MVQIPFSMKNLKINFKKQDKVDLEEKNEPCLIHNLRFPDAWLMTSKTEVMLLNPYRVEEA 754 Query: 438 LIFEKMRQDFN--STKITSQTLLTPEIIDLLEGECALIMEHDED-------------LHR 482 L+F+++ ++ + + +LT + + L +D L Sbjct: 755 LLFKRLLENHKLPAEPLEKPIMLTESLFNGSHYLDVLYKMTADDQRYSGSTYLSDPRLTA 814 Query: 483 LGIKAE-----RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 G K + N + I + L + L ++I++ I++ + + R ++ Sbjct: 815 NGFKIKLIPGVSITENYLEIEGMANCLPFYGVADL-KEILNAILNKNAKEVYECRPRKVI 873 Query: 538 ATM---ACYGSIRSGRKMQSIEMNRLLREMEK--NPNSSQCNHGRPTFIKLK 584 + + A S + + ++ ++ M+ C HGRP F L Sbjct: 874 SYLEGEAVRLSRQLPMYLSKEDIQDIIYRMKHQFGNEIKGCVHGRPFFHHLT 925 >gi|57164027|ref|NP_001009535.1| PMS1 protein homolog 1 [Rattus norvegicus] gi|38197450|gb|AAH61722.1| PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Rattus norvegicus] Length = 919 Score = 239 bits (609), Expect = 1e-60, Method: Composition-based stats. Identities = 106/514 (20%), Positives = 204/514 (39%), Gaps = 39/514 (7%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ + I +KELIENSLDA ++ ++ + G +I DNG G+ Sbjct: 2 KQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGANSIDVKLENYGFDKIEIRDNGAGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + ++P+ ++ TSKI +D + T+GFRGEAL +I V+ + + +R ++ Q Sbjct: 62 KAVDVPVMAVKYYTSKISSHEDLQTLTTYGFRGEALGAICNVAEVVVTTRTAADDFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V V LF +P R F K + E + D++ A+ Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTVLKLFKNLPVRRQFYSTPKKCKDELKNVQDLLISYAV 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P + TF K+ ++ +S + + V+G + N VE + ++I L+G Sbjct: 182 LKPDLRITFVHNKAVIWQ---KSRVPDHRMALMSVLGTAVMGNMESVERYCEDSQIHLRG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + ++FIN R V K IL IR Y YP+ L Sbjct: 239 LFPKHDADHNSTSLSTPERSFIFINSRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 +++ +VD+N+ P KS + +N + + + + S ++ +SS + Sbjct: 299 IDVPSAEVDINLTPDKSQVLLQNKESVLIALENLLMTCYGPLPTTESYENNRVDVSSANV 358 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 + T L N E + T + +D + + + E + G Sbjct: 359 VISETTETDV----LFNKMESSGNKYPNADTLAIPFQNDESRKNTDHHLNEQINIGHCDG 414 Query: 408 IACA---QIHQNYIISQTTDGLVIVDQHAAH---------ERLIFEKMRQDFNSTKITSQ 455 I+++ + + L + H E + E R + Sbjct: 415 HFSGEYSHINKDTFQNIPRNNLSSEANQSKHSETHSADSIEHIQGENGRSGTGENGEDGK 474 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 L + +++ + + + +G E Sbjct: 475 KTLPEKALEICADDWSKGN----VFNSMGENIEP 504 >gi|150404129|gb|ABR68378.1| DNA mismatch protein [Lactobacillus casei] gi|150404137|gb|ABR68382.1| DNA mismatch protein [Lactobacillus casei] gi|150404165|gb|ABR68396.1| DNA mismatch protein [Lactobacillus casei] Length = 249 Score = 239 bits (609), Expect = 1e-60, Method: Composition-based stats. Identities = 79/253 (31%), Positives = 140/253 (55%), Gaps = 6/253 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI--SDDFSN 86 EL+ENS+DA++++++ +I+ G +++DNG G+ +++ A RH TSKI + D N Sbjct: 1 ELVENSIDAQATQIDVLISAAGLQEIRVSDNGIGIAPDDVATAFLRHATSKILTTRDLFN 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRD 146 +H+ GFRGEAL SI AV+ + L + + G QI + G ++ + A GT VEV D Sbjct: 61 VHSLGFRGEALASIAAVADVKLTT-AMDSGIGTQIHVKGGEVEAQSTAAHRRGTDVEVND 119 Query: 147 LFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP 206 LFF PARL ++KS+Q E I D++ R+A+A P ++FT S + + + G+ Sbjct: 120 LFFNTPARLKYMKSQQTELGKIVDIVSRLAMANPDIAFTVSHDGNMVVR---TAGQGDLR 176 Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 + ++ + G + V+ + + + G T +P R + N + +NGR +++ + Sbjct: 177 QTLAGIYGLSVARSMVDFKAQDLDFRVSGLTSLPETTRASRNYLSLVVNGRYIKNFQLTK 236 Query: 267 TIRTAYAETIPLG 279 + Y + +G Sbjct: 237 AVIAGYGSKLMVG 249 >gi|74180273|dbj|BAE24444.1| unnamed protein product [Mus musculus] Length = 669 Score = 239 bits (609), Expect = 1e-60, Method: Composition-based stats. Identities = 104/440 (23%), Positives = 187/440 (42%), Gaps = 24/440 (5%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ + I +KELIENSLDA ++ +E + G +I DNG G+ Sbjct: 2 KQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGATSIEVKLENYGFDKIEIRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + ++P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R ++ Q Sbjct: 62 KAVDVPVMAVKYYTSKISSHEDLGNLTTYGFRGEALGSICNVAEVVVTTRTSADDFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E + D++ + Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALKLFKNLPVRKQFYSTAKKCKDELKNVQDLLISYGV 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P V TF K+ ++ +S + + V+G + N VE + + ++I L G Sbjct: 182 LKPDVRITFVHNKAVIWQ---KSRVPDHRMALMSVLGTAVMGNMESVEQHCEQSQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YP+ L Sbjct: 239 FFPKHDADHNSTSLSTPERSFIFINSRPVHQKDILKLIRRYYNLKCLKESTRLYPIFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 +++ +VD+N+ P KS + +N + + + + SS ++ ISS + Sbjct: 299 IDVPSAEVDINLTPDKSQVLLQNKESVLIALENLMMTCYGPLPTTESSENNRVDISSANM 358 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-EATHYQL 406 + T L N E T+ + D + + + E +Y Sbjct: 359 VVSQTTETDV----LFNKMESFGNNYPNADTSAIHFQKDESRKNIDHHLNEQINIGNYFD 414 Query: 407 GIACAQIHQNYIISQTTDGL 426 G I+++ + + L Sbjct: 415 GHFSGDINKDTFQNIPMNNL 434 >gi|156363567|ref|XP_001626114.1| predicted protein [Nematostella vectensis] gi|156212978|gb|EDO34014.1| predicted protein [Nematostella vectensis] Length = 775 Score = 239 bits (609), Expect = 1e-60, Method: Composition-based stats. Identities = 100/504 (19%), Positives = 196/504 (38%), Gaps = 37/504 (7%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 + K ++QI +G+++ + A+KEL+ENSLDA ++ V+ + G +++DNG G+ Sbjct: 18 PIDRKSVHQICSGQVVLNLATAMKELLENSLDAGATSVDVRLKEHGSHSIEVSDNGAGVE 77 Query: 65 SEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ-I 121 + +H TSK+ D D S + TFGFRGEAL S+ A+S L++ +R G + Sbjct: 78 PQNFEALTLKHYTSKLKDFSDLSAVETFGFRGEALSSLCALSDLSITTRHISQTAGTKLD 137 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAYP 180 K+ S P A GT+V V +LF T+P R FL++ + E + V++ + Sbjct: 138 YDHNGKLKSKLPCAREQGTMVTVLNLFSTLPVRHKEFLRNIKKEFVKLVHVLQGYCLISA 197 Query: 181 KVSFTFS-TIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE------------- 226 T + + R + + + I+ V G + + + + Sbjct: 198 GTRITCTNHVSGRRSTVVSTHGSSQIKDNITAVFGPKQVQSLLPFKQLQPSEEDCTELNL 257 Query: 227 ------KSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPL 278 ++N T+ G+ R ++++ + FIN R + + Y Sbjct: 258 SVVSNSETNPFTITGFISKADHGSGRSSSDRQFFFINKRPCDLPKVSRVVSEVYHMY-NR 316 Query: 279 GRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS 338 ++P V+L + + VDVNV P K + + T++ + S+ K + + Sbjct: 317 HQFPFVMLDISLKRDAVDVNVTPDKRQVFLQQETLLLATLRTSLIKMFDPGTSTYEVNQK 376 Query: 339 KKMISSFHQDNAPKTHLP-----KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 +H + + N L++ + + + + Sbjct: 377 MFTQIKLLPSPTQASHFSLASGDSPSGNNAGASTSGGFHSNSLNSLHGNNNVSGLWRKFS 436 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI-----VDQHAAHERLIFEKMRQDFN 448 + E Q ++H+ ++ + L++ D A IF M+ D Sbjct: 437 ELSPSGEKKQSQHEEQKERVHRGNKPTKVKEILLLKKDNKNDSLALDSSSIFPVMQSDLK 496 Query: 449 STKITSQTLLTPEIIDLLEGECAL 472 ++ + + L Sbjct: 497 EESFHTRQNIQETRGTFSNDQEDL 520 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 90/215 (41%), Gaps = 7/215 (3%) Query: 372 QENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 Q ++ S + + + + + + Q + +I+++ + L I+DQ Sbjct: 552 QNGKVRIFRAKISPENNSAAEEELTRNIQRGSFARMEIVGQFNLGFILAKLDNDLFIIDQ 611 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 HA+ E+ FE +T + +Q L+ P ++L ++++++ E + G + + Sbjct: 612 HASDEKYNFE---MQQRNTVLRNQRLIIPRKLELTAVNESILLDNLEIFRKNGFEFQIDD 668 Query: 492 P----NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIR 547 + + +P + + + ++I + D+ R+ + A+ AC SI Sbjct: 669 DAPATQKVKLVSVPTSKNWTFGVEDVEELIFMLSDAPGILCRPTRVRKMFASRACRMSIM 728 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 G + +M ++R M + + C HGRPT Sbjct: 729 VGTALSHAQMQGIVRHMGEMKHPWNCPHGRPTMRH 763 >gi|189458898|ref|NP_001121616.1| PMS1 protein homolog 1 isoform c [Homo sapiens] gi|58736981|dbj|BAD89399.1| PMS1 nirs variant 2 [Homo sapiens] Length = 770 Score = 239 bits (609), Expect = 1e-60, Method: Composition-based stats. Identities = 106/460 (23%), Positives = 191/460 (41%), Gaps = 37/460 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P + F K+ ++ +S + + V+G +NN + + + ++I L G Sbjct: 182 LKPDLRIVFVHNKAVIWQ---KSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YPV L Sbjct: 239 FLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSV 336 +++ VDVN+ P KS + +N + + + NK +S + + Sbjct: 299 IDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADI 358 Query: 337 LSKKMISS---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTY 389 + K + F++ + + TS+ Q + E+ +T+D L D Y Sbjct: 359 VLSKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGY 418 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + + ++ SQT Sbjct: 419 GHCSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCF 458 >gi|320580322|gb|EFW94545.1| MutL family mismatch-repair protein Pms1 [Pichia angusta DL-1] Length = 830 Score = 239 bits (609), Expect = 1e-60, Method: Composition-based stats. Identities = 87/355 (24%), Positives = 162/355 (45%), Gaps = 22/355 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M + ++ ++ I +G++I S A KEL+ENSLDA +++V G +++DNG Sbjct: 1 MTLTRIGTADVHNITSGQVIIDLSTASKELLENSLDAGATQVTITFKNHGIDSIEVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ-NNT 117 G+ E+ +H TSK+ +D +N+ T GFRGEAL S+ AV+ + + + Sbjct: 61 TGIDEEDFDGICMKHYTSKLRTFEDVANVRTLGFRGEALSSLCAVARVDITTSTKSIQPR 120 Query: 118 GAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRM 175 ++ ++ S + + N GT V + D+F +P R +K+ + E +++ Sbjct: 121 AYKLEYDHHGRLKSKQTASRNCGTTVLISDIFRNLPVRKTDLVKNGRREFQKAVTLLQSY 180 Query: 176 AIAYPKVSFTFSTIKSNRYK--MNFQSTNGNFPERISQVIGEDFINNAVELNE------- 226 A+ + + S K M S + + V G + + ++ Sbjct: 181 ALIKVGLRLVVQHVDSRGRKGIMLATSGSKQLRSNVLSVFGANGMAGLEPIDFRLNISAR 240 Query: 227 -----KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIPLG 279 +++ GY +F +G + ++ + F+NGR V+ + I Y L Sbjct: 241 FKLKACDMLLSVHGYLSNCSFGKGRSATDRQFWFVNGRPVKLQQFSKAITDVYKTFNHL- 299 Query: 280 RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 + PV++L LE+DP+ +DVNV P K I N I + + + + + + IS Sbjct: 300 QCPVILLDLELDPQFIDVNVTPDKRTIFLHNEAAIIEALKERVTEIFSSQDISIP 354 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 102/265 (38%), Gaps = 18/265 (6%) Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 K T+S + SS H T LP A+ + +K L+++ + + D Sbjct: 560 KSEKRTASATLTRTQSSLHD-----TELPIKASPGSFKMQKPKLEKSAGTRAAVDDITDE 614 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD----GLVIVDQHAAHERLIFEKM 443 + +E + S+ + Q + +I+ D L I+DQHA+ E+ FE+ Sbjct: 615 SDAERKLTLSVSKK-DFLEMQVIGQFNLGFILVTKQDKSGTHLFIIDQHASDEKYNFERY 673 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIRE 499 + T +Q L+ P+ + L + IM + E + G + +++ Sbjct: 674 Q---TETVFNNQPLVIPQQLHLNIIDELAIMNNLEVFGKNGFGLRVDEDAQPGERLSLTS 730 Query: 500 IPAILSKKNIPQLLRDIIDEIIDS-STTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 +P L +++ + + ++ +LA AC SI G+ + M Sbjct: 731 LPYSKDTTFGLSDLDELVHLVKEHHGRGVLRPSKVRAMLAMRACRTSIMIGKPLSHKTMT 790 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKL 583 ++R + C HGRPT L Sbjct: 791 SVVRNLAALDKPWNCPHGRPTMRHL 815 >gi|296815758|ref|XP_002848216.1| DNA mismatch repair protein [Arthroderma otae CBS 113480] gi|238841241|gb|EEQ30903.1| DNA mismatch repair protein [Arthroderma otae CBS 113480] Length = 763 Score = 238 bits (608), Expect = 2e-60, Method: Composition-based stats. Identities = 107/381 (28%), Positives = 171/381 (44%), Gaps = 50/381 (13%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ L +IN+IAAGEII P A+KELIENS+DA S+ VE Sbjct: 36 KIQALDPDVINKIAAGEIIVAPMHALKELIENSVDAGSTSVEI----------------- 78 Query: 62 GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 +A +D S+I T+GFRGEAL SI V+HLT+ ++ ++ + Sbjct: 79 --------LAF---------EDLSSIATYGFRGEALASISHVAHLTVTTKTAGSSCAWRA 121 Query: 122 AISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR 173 S K+ +P+A GT + V DLF+ +P R +S E I D++ Sbjct: 122 HYSDGKLVPAKPGQNAAPKPIAGRRGTQITVEDLFYNVPTRRRAFRSASEEYAKILDIVG 181 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVELNEKSNEI 231 R A+ +F+ ++ S N + +RI Q+ G N ++E++ K Sbjct: 182 RYAVHCSGTAFSCKKHGEAGVSLST-SINSSIVDRIRQLHGGAVANELVSLEVDGKKWGC 240 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 + ++ +FIN R+V+ I + Y+ +P G +P V L L I+ Sbjct: 241 HTSAWVTNANYH-AKRTTLLIFINHRSVESTAIKRAVEQTYSTFLPKGGHPFVYLDLNIE 299 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 P+++DVNVHP K + F N I I +I+ + + +S + + P Sbjct: 300 PQRLDVNVHPTKREVNFLNEDEIIESICGAIRTKLA--AVDSSRTFMTQTL--LPGIRPP 355 Query: 352 KTHLPKYATSLTNTQEKLFLQ 372 + T+LT E+L L+ Sbjct: 356 EPSPSTRDTALTGEGERLALR 376 >gi|171690870|ref|XP_001910360.1| hypothetical protein [Podospora anserina S mat+] gi|170945383|emb|CAP71495.1| unnamed protein product [Podospora anserina S mat+] Length = 1002 Score = 238 bits (608), Expect = 2e-60, Method: Composition-based stats. Identities = 92/395 (23%), Positives = 163/395 (41%), Gaps = 31/395 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + ++QI AG++I KEL+ENS+DA ++ +E G ++ DNG Sbjct: 6 TIKAIDSSAVHQIQAGQVIVDLCSVAKELVENSVDAGATTIEVRFKNQGLDSIEVQDNGA 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN--NT 117 G+ +H TSK+S DD S + TFGFRGEAL S+ A+S ++++ + Sbjct: 66 GIAPHNYQSVALKHYTSKLSTYDDLSTLQTFGFRGEALSSLCALSKFSVITCTKEQVPRA 125 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 K+ S V+ GT V V DLF +P R ++ + E + ++ + A Sbjct: 126 AKLEFEMSGKLKSTSVVSGQRGTSVIVEDLFRNLPVRRRELERNIKREWGKVISLLNQYA 185 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVEL---------- 224 V FT S + +M ST GN E I V G +N + + Sbjct: 186 CIQTGVKFTVSQQPTKGKRMVLFSTKGNPTTRENIINVFGVKTMNALITMDLKLQLTPTA 245 Query: 225 ----------NEKSNEITLQGYTGIPT--FNRGNANQFYVFINGRTVQDKFILSTIRTAY 272 + + E+ + G+ PT R ++ ++NGR + Y Sbjct: 246 GPLVKGKARADGSNTEVRVLGHVSRPTPGEGRQTPDRQMFYVNGRPCGLPQFVKVFNEVY 305 Query: 273 AETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI- 331 + P + +++D DVNV P K I + + + + +S+ + + + Sbjct: 306 RSY-NASQLPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQMLDNLRESLIELFETQDVT 364 Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQ 366 +S + F + ++ P S++N + Sbjct: 365 IPTSQARGLRQTPFKKPTLVRSQTPVSVASVSNRR 399 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 15/169 (8%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L I+DQHA+ E+ FE+++ + SQ L+ P+ + L E +I+E+ L R G Sbjct: 804 LFIIDQHASDEKYNFERLQSTTT---VQSQRLVQPKPLTLTALEEEIILENLVSLERNGF 860 Query: 486 KAE-------RFGPNAIAIREIP----AILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE 534 G + +P ++ +L+ + D S+TT ++ Sbjct: 861 VVSVDTSGDSPVGSRCQLVT-LPLSRETTFDLTDLEELIFLLGDNPSSSATTIPRPSKVR 919 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + A AC SI GR + +M R++R M C HGRPT L Sbjct: 920 KMFAMRACRSSIMIGRALSGRQMERVVRNMGGMEKPWNCPHGRPTMRHL 968 >gi|90192345|gb|ABD91835.1| mlh1 [Hartmannella vermiformis] Length = 210 Score = 238 bits (608), Expect = 2e-60, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 9/207 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+KL ++N+IAAGE+I RP+ AIKE++EN LDA ++ + V+ GGG QI DNG Sbjct: 1 RIKKLDPTVVNRIAAGEVIHRPANAIKEMMENCLDAGATNIRIVVKGGGIKMLQIQDNGC 60 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ +R TSK+ +D I TFGFRGEAL SI ++H+ +++ + Sbjct: 61 GIKKEDLPIVCERWTTSKLEKFEDLKKITTFGFRGEALASISHIAHVQIVTMTADSTCAY 120 Query: 120 QIAISGEKI-------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 + K+ + +P A GT + V D+F+ + +R LK E I DV+ Sbjct: 121 RAYYQDGKMVGKNGESADPKPCAGVKGTQITVEDMFYNVTSRQKALKQPNDEYLKIVDVV 180 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQ 199 + A+ SF + N ++ Q Sbjct: 181 TKYALHNYTASFNLKKMGENTSDVHTQ 207 >gi|308805450|ref|XP_003080037.1| putative PMS2 postmeiotic segregation incre (ISS) [Ostreococcus tauri] gi|116058496|emb|CAL53685.1| putative PMS2 postmeiotic segregation incre (ISS) [Ostreococcus tauri] Length = 1013 Score = 238 bits (608), Expect = 2e-60, Method: Composition-based stats. Identities = 107/576 (18%), Positives = 210/576 (36%), Gaps = 50/576 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + ++++I +G+++ KELIEN+LDA + +E G +++D+G G Sbjct: 12 IKPIDRAVVHRITSGQVVVDLRSVCKELIENALDATARSIEVRFKDHGVDVVEVSDDGRG 71 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGA 119 + ++ M ++ TSK+ +D + TFGFRGEAL S+ VS + +R ++ G Sbjct: 72 VRRGDVGMLTTKYATSKLERFEDLEALRTFGFRGEALSSLCGVSGEFEVTTRTEEDVAGL 131 Query: 120 QIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAI 177 +IA ++ S A + GT V V LF +P R +++ + E +++ A+ Sbjct: 132 KIAYDGEGRVMSESTTARSVGTTVRVGRLFEPLPVRRKELIRNAKREYGKALAIVQAYAL 191 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNG---NFPERISQVIGEDFINNAVELNEK---SNEI 231 V + + N T G + E I V G I + E+ + + Sbjct: 192 VSKSVRILCTHQSGKYGRTNVLHTRGEDASVRENIVTVFGSKMIASMREIELELEVGTGV 251 Query: 232 TLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 + G+ P G A ++ + ++NGR V + Y P + P+VVL + Sbjct: 252 RVSGFISEPRSGCGRAGTDRQFYYVNGRPVDLPRAARVVNETYRSFNP-NQAPMVVLDFQ 310 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN----KKGISTSSVLSKKMISSF 345 + DVNV P K I + I + + +A + ++ + S + S Sbjct: 311 LATNAYDVNVTPDKRKIMLHDEEAILAQMRDKLLEAFSPTRYTYAVTQEAPASAEKASPL 370 Query: 346 HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 + A T T K +E + + Sbjct: 371 ELSEQNGAEDDEDAEDETWTPAKGDDEETFAAVLRTASGQAEGSRGSKRDSSARSIDAQR 430 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 ++ + + E + E T S ++ E D Sbjct: 431 NLQTFGFTRDVTSVAIGGGWKIATTTQVSDEAMETEA--PAKAETTTVSPSMDEIEEDDE 488 Query: 466 LEGECALIMEHDED-----LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 L ++ + ++ E G + E L + + + +I+D+ Sbjct: 489 DAKRPRLEDTQKDEDERPSFAHVDVEFEDVGAT---VEE----LRRPDATE---EILDD- 537 Query: 521 IDSSTTYTLQDRIENILATM--------ACYGSIRS 548 ++ +E++LA A ++++ Sbjct: 538 ------GSIPFSMEDMLARRRNSHKRATAKQSAVKA 567 Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 40/301 (13%), Positives = 91/301 (30%), Gaps = 61/301 (20%) Query: 326 INKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 + + + + + S A + + K AT+ + + + +D S Sbjct: 525 LRRPDATEEILDDGSIPFSMEDMLARRRNSHKRATAKQSAVKAFDSAHVSAADDDTAEST 584 Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 + + + + + Q + +I++ D L I+DQHA+ E FE++++ Sbjct: 585 ERATAAARELERVFDKADFAKMRIVGQFNLGFILATLGDDLFIIDQHASDEIYNFERLQR 644 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP------------- 492 ++ Q L+ P +DL E ++++ + G Sbjct: 645 TTT---LSKQPLIHPVPLDLTASEEQTVLQNMPVFLKNGFGFCDVAESVPGADMNNSSVD 701 Query: 493 -----NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT------------------- 528 ++ + +P + + + +++ + + Sbjct: 702 PSARCGSLRLSAVPVLKNVVFDKTDVHELVSMLDRGQHSLPANSQLSIGLTRHDQRGDSS 761 Query: 529 ------LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 + LA AC G +L + C HGRPT Sbjct: 762 SDVRVLRPAKTRAALAMKACRG---------------VLNNLTTLDAPWNCPHGRPTMRH 806 Query: 583 L 583 L Sbjct: 807 L 807 >gi|148232222|ref|NP_001079545.1| postmeiotic segregation increased 1 [Xenopus laevis] gi|28277270|gb|AAH44098.1| Pms1 protein [Xenopus laevis] Length = 925 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 98/481 (20%), Positives = 194/481 (40%), Gaps = 45/481 (9%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 L I+ +++ ++I +KEL+EN+LDA ++ +E + G ++ DNG G+ Sbjct: 2 HHLPSATIHLLSSSQVITSVVSVVKELVENALDASATSIEIKLENFGFDKIEVRDNGKGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 +E + +H TSKI +D + T+GFRGEAL SI V+ + + ++ + Sbjct: 62 KHDETSVMGIKHYTSKINSHEDLETLETYGFRGEALASICCVAEVHITTKTLADEFSKLY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE---QVETNLITDVIRRMAI 177 + + S +P + GT V V LF +P R + + + E I +++ I Sbjct: 122 VLDSSGHVVSQKPSHLGQGTTVSVHKLFKNLPVRKQYYSTNKKCKEEIKKIQELLMAYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE--KSNEITLQG 235 P + F+ K+ ++ +S + V+G +N V ++ EI++ G Sbjct: 182 IIPDLRILFTHNKALVWQ---KSKVSDHKMAFMSVVGSATMNGMVPFQYQSEAPEISING 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR---YPVVVLL 287 Y P + ++ + ++FIN R V K I+ +R + +++ G YPV + Sbjct: 239 YLPKPDADITVTSLSSSEKSFLFINRRPVYHKEIMKMVRLYHTQSLNKGSPRCYPVFFMN 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 + + +DVN+ P K+ I +N + + ++ I + + H Sbjct: 299 IVLPASCLDVNLTPDKTKIMLQNKESVLLAVENVLRSVYPDSQILETDKDKMPEDTVTHN 358 Query: 348 DNAPKTHL----------------PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + TH+ P + S+ ++ + + + D + D Sbjct: 359 TDNSNTHVVENKITGCGGKSLSVCPSFLNSVQEQKQSVNSLQPQTFNKDTIFYSDNAEVA 418 Query: 392 DNDP---------VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ-HAAHERLIFE 441 ++ E S + ++ S T+ L +D H E+ F+ Sbjct: 419 YSENETFDGFLVPTESSNTQDEAIADTGLHFAVSHSNSMDTESLNPIDSVHQVSEKDTFK 478 Query: 442 K 442 K Sbjct: 479 K 479 >gi|196013037|ref|XP_002116380.1| hypothetical protein TRIADDRAFT_30981 [Trichoplax adhaerens] gi|190580971|gb|EDV21050.1| hypothetical protein TRIADDRAFT_30981 [Trichoplax adhaerens] Length = 357 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 92/320 (28%), Positives = 156/320 (48%), Gaps = 18/320 (5%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 KL ++ I++G++I IKELIENSLDA ++ ++ + G +I DNG G+ Sbjct: 3 KLVPSVVRLISSGQVIHSIQSVIKELIENSLDAGATSIDIKLENFGLDKIEIRDNGCGIP 62 Query: 65 SEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + E Q+H TSK+ D D S+I T+GFRGEAL S+ AVS ++++++ +N Sbjct: 63 ATETAYMGQKHYTSKLRDMQDLSSIMTYGFRGEALSSLCAVSDVSIVTKTQTDNVSTFYE 122 Query: 123 ISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS---EQVETNLITDVIRRMAIA 178 + + I +P GT + +LF ++P R K+ + E I D+I AI Sbjct: 123 LHYDGTIKKSKPSHYGQGTSIIACNLFKSLPVRRQVYKTNKKCKEELKRIEDLIISYAII 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE--KSNEITLQGY 236 P V F KS ++ + + IS G + + +N + +L+GY Sbjct: 183 KPTVRFCLKHNKSVIWQ---KCQVADIGSAISVAFGRAVFSEMITINYKGEDPAFSLRGY 239 Query: 237 TGIPTFNRG-----NANQFYVFINGRTVQDKFILSTIRTAY--AETIPLGRYPVVVLLLE 289 N N+++ +++IN R V K +L I+ Y + + ++P+ +L Sbjct: 240 IPKNYSNDELTGRSNSDRCFIYINQRPVMFKGVLQAIKHHYLACQKGQINKWPIAILDFT 299 Query: 290 IDPRQVDVNVHPAKSYIRFR 309 ID + VDVNV +K+ + Sbjct: 300 IDSKLVDVNVESSKTQVYLS 319 >gi|148667571|gb|EDK99987.1| postmeiotic segregation increased 1 (S. cerevisiae) [Mus musculus] Length = 923 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 103/442 (23%), Positives = 188/442 (42%), Gaps = 24/442 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++++L + +++ + I +KELIENSLDA ++ +E + G +I DNG Sbjct: 6 RMKQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGATSIEVKLENYGFDKIEIRDNGE 65 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R ++ Sbjct: 66 GIKAVDVPVMAVKYYTSKISSHEDLGNLTTYGFRGEALGSICNVAEVVVTTRTSADDFST 125 Query: 120 QIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRM 175 Q + I S +P + GT V LF +P R F K + E + D++ Sbjct: 126 QYVLDGSGHILSQKPSHLGQGTTVTALKLFKNLPVRKQFYSTAKKCKDELKNVQDLLISY 185 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITL 233 + P V TF K+ ++ +S + + V+G + N VE + + ++I L Sbjct: 186 GVLKPDVRITFVHNKAVIWQ---KSRVPDHRMALMSVLGTAVMGNMESVEQHCEQSQIYL 242 Query: 234 QGYTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVV 285 G+ + + ++FIN R V K IL IR Y YP+ Sbjct: 243 SGFFPKHDADHNSTSLSTPERSFIFINSRPVHQKDILKLIRRYYNLKCLKESTRLYPIFF 302 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF 345 L +++ +VD+N+ P KS + +N + + + + SS ++ ISS Sbjct: 303 LKIDVPSAEVDINLTPDKSQVLLQNKESVLIALENLMMTCYGPLPTTESSENNRVDISSA 362 Query: 346 HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-EATHY 404 + + L N E T+ + D + + + E +Y Sbjct: 363 NMVVSQTAETDV----LFNKMESFGNNYPNADTSAIHFQKDESRKNIDHHLNEQINIGNY 418 Query: 405 QLGIACAQIHQNYIISQTTDGL 426 G I+++ + + L Sbjct: 419 FDGHFSGDINKDTFQNIPMNNL 440 >gi|330946024|ref|XP_003306681.1| hypothetical protein PTT_19873 [Pyrenophora teres f. teres 0-1] gi|311315731|gb|EFQ85232.1| hypothetical protein PTT_19873 [Pyrenophora teres f. teres 0-1] Length = 1003 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 96/425 (22%), Positives = 168/425 (39%), Gaps = 39/425 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I KEL+ENS+DA ++ VE G ++ DNG Sbjct: 3 TIKAIEGRSVHQIQSGQVIVDLQSVCKELVENSIDAGATSVEVRFKNYGLDAIEVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMS-RPPQNNTG 118 G+ ++ +H TSK++ DD + + TFGFRGEAL S+ A+S+ +++ R G Sbjct: 63 GIAPDDYETIALKHYTSKLATYDDLALLQTFGFRGEALSSLCALSNFHIITARASDGPKG 122 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ K+ + VA GT V V LF +P R K+ + E N + ++ A Sbjct: 123 TRLDFEQSGKLKATSVVAAKQGTTVVVETLFHNLPVRRKELEKNIKREYNKVLQLLNAYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKSNE---- 230 V F+ S K STN N + IS V G I V L Sbjct: 183 CISVGVKFSVSNQIPKGKKTIAFSTNANTSTRDNISNVYGAKTIAALVPLTLDFAMDPSN 242 Query: 231 ---------------------ITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILST 267 + + G+ P R ++ F+N R+ + Sbjct: 243 RPGATQTARNCSTQEDPGSRTVKIIGHISRPVVGEGRQTPDRQMFFVNSRSCTLPQVAKA 302 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI- 326 Y + + P + +++D DVNV P K I + T + + S+ + Sbjct: 303 FNEVYKSY-NVTQSPFIFADIQLDTNAYDVNVSPDKRTIMLHDQTALLEKLKNSLIELFE 361 Query: 327 --NKKGISTSSVLSKKMISSFHQD-NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 ++ + + +K S+F P+ + + E+ + N +P Sbjct: 362 GQDQSMPQSRLLGNKTPTSAFKPPTMQPRESAASMSDEDDSEPERSDQAHQAMPKNAEVP 421 Query: 384 SDDPT 388 S + Sbjct: 422 SPQDS 426 Score = 43.1 bits (100), Expect = 0.13, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 18/177 (10%) Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 SL NT +K + + + ++ P + + + E + + Sbjct: 814 SLANTADKSMV-PSSIQLDNSDPEERLSLTVTKSDFHEMRIVGQFNLGFIIAVRPPTSTA 872 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 T L I+DQHA+ E+ FE++ +T + Q L+ P ++L E +I+ ++ L Sbjct: 873 -PTSDLFIIDQHASDEKYNFERL---AATTVLVPQRLVHPHPLELTAVEKEIILANEHAL 928 Query: 481 HRLGIKA------------ERFGPNAIA-IREIPAILSKKNIPQLLRDIIDEIIDSS 524 G E N A + +P P L +++ I+D+ Sbjct: 929 TANGFVIDMTTDPDPSADEESNPHNTAAHLTSLPMSKEITFSPTDLEELLALILDNP 985 >gi|225557600|gb|EEH05886.1| DNA mismatch repair protein pms1 [Ajellomyces capsulatus G186AR] Length = 1515 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 95/444 (21%), Positives = 176/444 (39%), Gaps = 43/444 (9%) Query: 9 KIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEI 68 +++QI +G++I +KEL+ENSLDA ++ ++ G ++ DNG G++ ++ Sbjct: 457 ALVHQIQSGQVIVDLCSVVKELVENSLDAGATSLDIRFKNNGLDLIEVQDNGKGISPDDY 516 Query: 69 PMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTGAQIAISG 125 +H TSK+S DD S++ TFGFRGEAL S+ A+S+ +++ +++ Sbjct: 517 ETVALKHYTSKLSKFDDLSSLQTFGFRGEALSSLCALSNFHIITAQAHEVPKASRLEFEI 576 Query: 126 E-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIAYPKVS 183 K+ S VA GT V +LF +P R K+ + E + ++ A V Sbjct: 577 SGKLKSTHTVAGQKGTTASVENLFNRLPVRRRELEKNIKREYGKVLGLLHAYACISTGVR 636 Query: 184 FTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEK-------------- 227 F + +T N E IS + G + L+ + Sbjct: 637 FNVKNQMPKGKSVVVFATKSNTSTNENISNIYGAKTLLALTPLDLELEFKPSGMGKRLIG 696 Query: 228 -----SNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 N+I +QG+ P F R ++ F+N R I Y + + Sbjct: 697 AGTNDPNKIFVQGHISRPIFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYKSF-NISQ 755 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK 340 P + ++D DVNV P K I + + + S+ + L ++ Sbjct: 756 SPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKVSL------------TELFER 803 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 + Q +S TN + F+ + + ++ S++ ++ N+ +E Sbjct: 804 QDQTVPQSQISGKQSMLQHSSGTNIPK--FISKKSVESSAPQRSEEIVEADGNNEEDEQR 861 Query: 401 ATHYQLGIACAQIHQNYIISQTTD 424 A + + Y I + + Sbjct: 862 AMRAFVQRFTGRSTTAYDIPEIPE 885 Score = 127 bits (319), Expect = 6e-27, Method: Composition-based stats. Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 32/203 (15%) Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 S D + I+DQHA+ E+ FE+++ T + +Q L+ P+I+ L E +I Sbjct: 1276 DPRAFPSHKNDEVFIIDQHASDEKYNFERLQ---AETVVQNQRLVKPKILTLTAVEEEII 1332 Query: 474 MEHDEDLHRLGIKAE--RFGPNAI----AIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 +++ L + G E R G I + +P Q L ++I + +S T Sbjct: 1333 IDNLPTLEKNGFVVEVDRSGDEPIGRRCKLTSLPLSKEMVFDTQDLEELIVLLGESPQTQ 1392 Query: 528 ----------------------TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 ++ + A AC SI G+ + + +M+ ++R M Sbjct: 1393 SASSPSSSDSVLTPTTFGSKYIPRPSKVRKMFAMRACRSSIMIGKTLTNKQMDCVVRHMG 1452 Query: 566 KNPNSSQCNHGRPTFIKL-KLSD 587 C HGRPT L L + Sbjct: 1453 MIDKPWNCPHGRPTMRHLMSLGE 1475 >gi|115744121|ref|XP_786592.2| PREDICTED: similar to PMS2 protein [Strongylocentrotus purpuratus] gi|115963172|ref|XP_001185952.1| PREDICTED: similar to PMS2 protein [Strongylocentrotus purpuratus] Length = 816 Score = 238 bits (606), Expect = 3e-60, Method: Composition-based stats. Identities = 91/352 (25%), Positives = 159/352 (45%), Gaps = 27/352 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K++ + + ++QI +G+++ + AIKEL+ENSLDA ++ +E + G +++DN Sbjct: 6 KVKAIDRRSVHQICSGQVVLNLATAIKELVENSLDAGATIIEIKLKDYGGESLEVSDNAS 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +H TSK+ D D S + TFGFRGEAL S+ A+S LT+++ + G Sbjct: 66 GVQECNFSGLTLKHHTSKLHDFSDLSTVDTFGFRGEALSSLCALSDLTIVTCHRSASVGT 125 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 ++ + KI P GT V +++LF T+P R F ++ + E + V++ I Sbjct: 126 KLVYDHDGKILKQVPCPRQQGTTVTLQNLFSTLPVRHKEFQRNLKKEFTKMVQVLQAYCI 185 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNE--------- 226 V T + K STNG E ++ V G I + +E ++ Sbjct: 186 IASGVKLTCTNQTDKGKKSLVVSTNGTSTMRENVANVFGSKQIQSLLEFDQCKPTPEMCE 245 Query: 227 ---------KSNEITLQGYTGIPTFNRGN--ANQFYVFINGRTVQDKFILSTIRTAYAET 275 + ++ G+ +G A++ Y FIN R + S I + Sbjct: 246 EYGIKPERLEKIPFSISGFVSKCDHGQGRSAADRQYYFINRRPCDFPKVCSLINEVFHMY 305 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 +YP VV+ + + VDVNV P K + + + + S++ Sbjct: 306 -NRHQYPFVVMDISLAKDAVDVNVTPDKRKVLVQEEKTLLAILKASLKTMFE 356 Score = 144 bits (362), Expect = 5e-32, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 82/204 (40%), Gaps = 7/204 (3%) Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + S + + E + Q + +II++ L I+DQHA E+ FE + Sbjct: 608 APSDNASAEEELSREISKDMFSKMEILGQFNLGFIIAKLGQDLFIIDQHATDEKYNFETL 667 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIRE 499 ++ T + Q L+ P ++L +++M+ E + G + + + Sbjct: 668 QKH---TVLQGQRLIQPLPLELTAVNESILMDDVEIFKKNGFDFIINEDGRPTERVKLVS 724 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P + + ++I + D+ + ++ + A+ +C SI G + EM + Sbjct: 725 QPFSKNWTFGKDDIDELIFMLSDAPGVHCRPTKVRQMFASRSCRKSIMIGTALNKAEMKK 784 Query: 560 LLREMEKNPNSSQCNHGRPTFIKL 583 L+ M + C HGRPT L Sbjct: 785 LVCHMGELEQPWNCPHGRPTMRHL 808 >gi|47222034|emb|CAG08289.1| unnamed protein product [Tetraodon nigroviridis] Length = 854 Score = 238 bits (606), Expect = 3e-60, Method: Composition-based stats. Identities = 87/377 (23%), Positives = 169/377 (44%), Gaps = 29/377 (7%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ ++I +KEL+ENSLDA +S ++ + G ++ DNG G+ Sbjct: 2 KQLPPDTVRLLSSSQVITSVVNVVKELLENSLDAGASNIDVKLENYGLERIEVRDNGHGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSH---LTLMSRPPQNNTG 118 + + + RH TSKI +D ++ T+GFRGEAL SI AV+ +T+ ++ + + Sbjct: 62 KAADTAVMAVRHFTSKICTHEDLGHLETYGFRGEALGSICAVAEVTFVTVTTKTEEEDIS 121 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRR 174 Q ++ I S +P + GT V V +F T+P R + K + E + D++ Sbjct: 122 TQYTLNLTGGIVSQKPSHLGQGTTVSVLRIFKTLPVRRQYYSSTKKRKEELKKVQDLLLA 181 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE--KSNEIT 232 A+ P++ T + + ++ + ++ +G + N V + + EI+ Sbjct: 182 YAMIKPELRLTLVHD---KVVVWQKAKVPDHRSALAATLGPSVVMNLVPCHHRQEQPEIS 238 Query: 233 LQGYTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG----RYPV 283 L+G+ P + ++ + F+N R V K I+ +R Y P RYP+ Sbjct: 239 LEGFFPKPGADYSSTSTSGPDRTFTFVNNRPVHHKDIMKLLRQHYTAQYPADGARSRYPI 298 Query: 284 VVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII------QSIQKAINKKGISTSSVL 337 ++L + + P VDVN+ P K+ + + + + + + S Sbjct: 299 LMLSVTVPPSAVDVNLTPDKTQVLLHDKEAVLTALEALLVSLYGFRPTEDPPAQRPPSSE 358 Query: 338 SKKMISSFHQDNAPKTH 354 + +DN P + Sbjct: 359 TWSAPPEPQRDNRPASS 375 >gi|66365814|gb|AAH96332.1| PMS1 protein [Homo sapiens] gi|66365840|gb|AAH96330.1| PMS1 protein [Homo sapiens] Length = 920 Score = 238 bits (606), Expect = 3e-60, Method: Composition-based stats. Identities = 106/460 (23%), Positives = 191/460 (41%), Gaps = 37/460 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P + F K+ ++ +S + + V+G +NN + + + ++I L G Sbjct: 182 LKPDLRIVFVHNKAVIWQ---KSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YPV L Sbjct: 239 FLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSV 336 +++ VDVN+ P KS + +N + + + NK +S + + Sbjct: 299 IDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADI 358 Query: 337 LSKKMISS---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTY 389 + K + F++ + + TS+ Q + E+ +T+D L D Y Sbjct: 359 VLSKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGY 418 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + + ++ SQT Sbjct: 419 GHCSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCF 458 >gi|4505911|ref|NP_000525.1| PMS1 protein homolog 1 isoform a [Homo sapiens] gi|1709683|sp|P54277|PMS1_HUMAN RecName: Full=PMS1 protein homolog 1; AltName: Full=DNA mismatch repair protein PMS1 gi|535513|gb|AAA63922.1| homolog of yeast mutL gene [Homo sapiens] gi|29725938|gb|AAO89079.1| PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Homo sapiens] gi|119631288|gb|EAX10883.1| PMS1 postmeiotic segregation increased 1 (S. cerevisiae), isoform CRA_a [Homo sapiens] gi|119631290|gb|EAX10885.1| PMS1 postmeiotic segregation increased 1 (S. cerevisiae), isoform CRA_a [Homo sapiens] gi|307685747|dbj|BAJ20804.1| PMS1 postmeiotic segregation increased 1 [synthetic construct] gi|746340|prf||2017356A PMS1 gene Length = 932 Score = 238 bits (606), Expect = 3e-60, Method: Composition-based stats. Identities = 106/460 (23%), Positives = 191/460 (41%), Gaps = 37/460 (8%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P + F K+ ++ +S + + V+G +NN + + + ++I L G Sbjct: 182 LKPDLRIVFVHNKAVIWQ---KSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YPV L Sbjct: 239 FLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSV 336 +++ VDVN+ P KS + +N + + + NK +S + + Sbjct: 299 IDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADI 358 Query: 337 LSKKMISS---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTY 389 + K + F++ + + TS+ Q + E+ +T+D L D Y Sbjct: 359 VLSKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGY 418 Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + + ++ SQT Sbjct: 419 GHCSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCF 458 Score = 38.5 bits (88), Expect = 3.3, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 103/301 (34%), Gaps = 29/301 (9%) Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 R + ++ I Q Q ++ + + H+ ++ PK L + EK Sbjct: 630 RYNSQMKRAIEQESQMSLKDGRKKIKPTSAWNLAQK-HKLKTSLSNQPKLDELLQSQIEK 688 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 Q ++ + + + V+ E L + + + +++ Sbjct: 689 RRSQNIKMVQIPFSMKNLKINFKKQNKVDLEEKDEPCLIHNLR--FPDAWLMTSKTEVML 746 Query: 429 VDQHAAHERLIFEKMRQDFN--STKITSQTLLTPEIIDLLEGECALIMEHDED------- 479 ++ + E L+F+++ ++ + + +LT + + L +D Sbjct: 747 LNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTESLFNGSHYLDVLYKMTADDQRYSGST 806 Query: 480 ------LHRLGIKAE-----RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 L G K + N + I + L + L ++I++ I++ + Sbjct: 807 YLSDPRLTANGFKIKLIPGVSITENYLEIEGMANCLPFYGVADL-KEILNAILNRNAKEV 865 Query: 529 LQDRIENILATM---ACYGSIRSGRKMQSIEMNRLLREMEK--NPNSSQCNHGRPTFIKL 583 + R +++ + A S + + ++ ++ M+ +C HGRP F L Sbjct: 866 YECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDIIYRMKHQFGNEIKECVHGRPFFHHL 925 Query: 584 K 584 Sbjct: 926 T 926 >gi|325096304|gb|EGC49614.1| DNA mismatch repair protein [Ajellomyces capsulatus H88] Length = 1515 Score = 238 bits (606), Expect = 3e-60, Method: Composition-based stats. Identities = 96/444 (21%), Positives = 175/444 (39%), Gaps = 43/444 (9%) Query: 9 KIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEI 68 +++QI +G++I +KEL+ENSLDA ++ ++ G ++ DNG G++ ++ Sbjct: 457 ALVHQIQSGQVIVDLCSVVKELVENSLDAGATSLDIRFKNNGLDLIEVQDNGKGISPDDY 516 Query: 69 PMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTGAQIAISG 125 +H TSK+S DD S++ TFGFRGEAL S+ A+S +++ +++ Sbjct: 517 ETVALKHYTSKLSKFDDLSSLQTFGFRGEALSSLCALSSFHIITAQAHEVPKASRLEFEI 576 Query: 126 E-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIAYPKVS 183 K+ S VA GT V +LF +P R K+ + E + ++ A V Sbjct: 577 SGKLKSTHTVAGQKGTTASVENLFNRLPVRRRELEKNIKREYGKVLGLLHAYACISTGVR 636 Query: 184 FTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEK-------------- 227 F + +T N E IS + G + LN + Sbjct: 637 FNVKNQMPKGKSVVVFATKSNTSTNENISNIYGAKTLLALTPLNLELEFKPSGMGKRLIG 696 Query: 228 -----SNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 N+I +QG+ P F R ++ F+N R I Y + + Sbjct: 697 AGTNDPNKIFVQGHISRPIFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYKSF-NISQ 755 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK 340 P + ++D DVNV P K I + + + S+ + L ++ Sbjct: 756 SPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKVSL------------TELFER 803 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 + Q +S TN + F+ + + ++ S++ ++ N+ +E Sbjct: 804 QDQTVPQSQVSGKQSMLQHSSGTNIPK--FISKKSVESSAPQRSEEIVEADGNNEEDEQT 861 Query: 401 ATHYQLGIACAQIHQNYIISQTTD 424 A + + Y I + + Sbjct: 862 AMRAFVQRFTGRSTTAYDIPEIPE 885 Score = 127 bits (318), Expect = 7e-27, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 79/198 (39%), Gaps = 31/198 (15%) Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 S D + I+DQHA+ E+ FE+++ T + +Q L+ P+I+ L E +I Sbjct: 1276 DSRAFPSHKNDEVFIIDQHASDEKYNFERLQ---AETVVQNQRLVKPKILTLTAVEEEII 1332 Query: 474 MEHDEDLHRLGIKAE--RFGPNAI----AIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 +++ L + G E R G I + +P Q L ++I + +S T Sbjct: 1333 IDNLPTLEKNGFVVEVDRSGDEPIGRRCKLTSLPLSKEMVFDTQDLEELIVLLGESPQTQ 1392 Query: 528 ----------------------TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 ++ + A AC SI G+ + + +M+ ++R M Sbjct: 1393 SASSPSSSDSVLTPTTFGSKYIPRPSKVRKMFAMRACRSSIMIGKTLTNKQMDCVVRHMG 1452 Query: 566 KNPNSSQCNHGRPTFIKL 583 C HGRPT L Sbjct: 1453 MIDKPWNCPHGRPTMRHL 1470 >gi|23956336|ref|NP_705784.1| PMS1 protein homolog 1 [Mus musculus] gi|20810039|gb|AAH28939.1| Postmeiotic segregation increased 1 (S. cerevisiae) [Mus musculus] Length = 917 Score = 238 bits (606), Expect = 3e-60, Method: Composition-based stats. Identities = 103/440 (23%), Positives = 186/440 (42%), Gaps = 24/440 (5%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ + I +KELIENSLDA ++ +E + G +I DNG G+ Sbjct: 2 KQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGATSIEVKLENYGFDKIEIRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + ++P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R ++ Q Sbjct: 62 KAVDVPVMAVKYYTSKISSHEDLGNLTTYGFRGEALGSICNVAEVVVTTRTSADDFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E + D++ + Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALKLFKNLPVRKQFYSTAKKCKDELKNVQDLLISYGV 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P V TF K+ ++ +S + + V+G + N VE + + ++I L G Sbjct: 182 LKPDVRITFVHNKAVIWQ---KSRVPDHRMALMSVLGTAVMGNMESVEQHCEQSQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YP+ L Sbjct: 239 FFPKHDADHNSTSLSTPERSFIFINSRPVHQKDILKLIRRYYNLKCLKESTRLYPIFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 +++ +VD+N+ P KS + +N + + + + SS ++ ISS + Sbjct: 299 IDVPSAEVDINLTPDKSQVLLQNKESVLIALENLMMTCYGPLPTTESSENNRVDISSANM 358 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-EATHYQL 406 + L N E T+ + D + + + E +Y Sbjct: 359 VVSQTAETDV----LFNKMESFGNNYPNADTSAIHFQKDESRKNIDHHLNEQINIGNYFD 414 Query: 407 GIACAQIHQNYIISQTTDGL 426 G I+++ + + L Sbjct: 415 GHFSGDINKDTFQNIPMNNL 434 >gi|213405255|ref|XP_002173399.1| DNA mismatch repair protein pms1 [Schizosaccharomyces japonicus yFS275] gi|212001446|gb|EEB07106.1| DNA mismatch repair protein pms1 [Schizosaccharomyces japonicus yFS275] Length = 800 Score = 238 bits (606), Expect = 3e-60, Method: Composition-based stats. Identities = 87/404 (21%), Positives = 167/404 (41%), Gaps = 20/404 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR + +K I++I +G++I + A+KEL+ENSLDA ++ +E G ++ DNG Sbjct: 1 MSIRPIDKKSIHRICSGQVITDIASAVKELVENSLDAGATNIEIRFKHYGLDTIEVVDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NT 117 G++S++ +++ TSK++ +D S + TFGFRGEAL S+ A+S L + + Q Sbjct: 61 NGISSDDHACIAKKYYTSKLNEFEDLSKLGTFGFRGEALSSLCALSDLQVSTATAQETPK 120 Query: 118 GAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRM 175 G + + E + V GT++ V+++F T+P R ++ + E + +++ Sbjct: 121 GHSLTFNHEGDLVKHAVVPFQKGTMITVQNIFSTLPVRRKHLERNYKKEYSKALVLLQMY 180 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKSNEITL 233 A+ + S+N N + I V G ++ N+ + Sbjct: 181 AVVSVNKRILVYHQPKGGGRQLQLSSNKNPSMLKNIMNVFGTKVSSS----LTAWNDDFI 236 Query: 234 QGYTGIPTFN--RGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 GY P + ++ +F+NGR + + I Y + + P + L + Sbjct: 237 NGYISRPQIAGIKSSSEGQMLFLNGRPITHPKVHRLIMEVYRSF-SVNQSPFFAVNLVLP 295 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRN------FIIQSIQKAINKKGISTSSVLSKKMISSF 345 D+ H F I + + ++++ T VL K Sbjct: 296 EDCYDIMFHLTSGVFSFLTRKTIAKSSRFVTSLCDQTEYSLSQAKPYTPKVLQKPEFLRS 355 Query: 346 HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + L + N+ + + RL + L + + Sbjct: 356 SPPLQSDSSLNSPLLAFGNSDTSVSSDKKRLLDSQSLDAFESAI 399 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 9/186 (4%) Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + Q + +II + L I+DQHA+ E+ +EK++++ +++Q L+ P+ Sbjct: 604 DFLCMRIIGQFNCGFIIVRHAQNLFIIDQHASDEKYNYEKLKRNC---VLSAQDLVAPKQ 660 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAE-----RFGPNAIAIREIPAILSKKNIPQLLRDII 517 ++L E +++H + + G + G + +P+ L +++ Sbjct: 661 LNLAVNEELALLDHLPIIEKKGFRVTVDETAPIGKRCKLV-SVPSSSHTIFDVSDLLEML 719 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 ++D +IE +LA AC SI GR + EM ++R + C HGR Sbjct: 720 GLLVDHPEMEPSSSKIEKMLAMKACRRSIMVGRSLTISEMTSVVRHLATLSKPWNCPHGR 779 Query: 578 PTFIKL 583 PT L Sbjct: 780 PTMRHL 785 >gi|254572842|ref|XP_002493530.1| ATP-binding protein required for mismatch repair in mitosis and meiosis [Pichia pastoris GS115] gi|238033329|emb|CAY71351.1| ATP-binding protein required for mismatch repair in mitosis and meiosis [Pichia pastoris GS115] gi|328354646|emb|CCA41043.1| Mismatch repair endonuclease PMS2 [Pichia pastoris CBS 7435] Length = 903 Score = 238 bits (606), Expect = 3e-60, Method: Composition-based stats. Identities = 95/376 (25%), Positives = 179/376 (47%), Gaps = 18/376 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I ++SEK +++++G++I + A+KEL+EN++DA SS+++ I G Q++D+G G Sbjct: 2 ITQISEKDAHKLSSGQLIIDLTAAVKELVENAIDANSSQIQITIKDYGLDSIQVSDDGVG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ E+ P + TSK+S +D + T GFRGEA+ S+ +S++T+++ P + ++ Sbjct: 62 ISVEDHPFVCSPYYTSKLSSFEDLQAVSTLGFRGEAMSSLCNISNVTIVTCPDPDVAASK 121 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIA 178 + K+ ++ GT V + ++F +P R +K + + + V++ A+ Sbjct: 122 LEYDHSGKLIKSSSISAKKGTEVTISNIFENLPVRRKELVKHAKRDFYKLMTVLQSYAVI 181 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNG-NFPERISQVIGE---------DFINNAVELNEKS 228 + + I + K +T G + + V G + + + Sbjct: 182 NTQRRIMVNHITAKGKKNQMLATQGASLKGNLVNVFGAGALNGLIPINIQLSISAKYSEE 241 Query: 229 NEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 E++++GY +F +G A ++ FINGR V + I AY L +YP+VVL Sbjct: 242 FELSVEGYISNCSFGQGRASSDRQLFFINGRPVDLAQLSKKINEAYKTFNHL-QYPMVVL 300 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRN-FIIQSIQKAINKKGISTSSVLSKKMISSF 345 L++DP +D+NV P K I + + I I + ++ I S + SS Sbjct: 301 NLKLDPNYLDINVTPDKRTIMIHHEDQVLESLIDALINEFNSQSHIIPKQETSTLVDSSM 360 Query: 346 HQDNAPKTHLPKYATS 361 Q T + S Sbjct: 361 LQRPTGDTSFRQRKRS 376 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 20/206 (9%) Query: 400 EATHYQLGIACAQIHQNYII-----SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 T + Q + +II ++ L IVDQHA+ E+ FE + +T+ S Sbjct: 692 SKTDFLKMKVVGQFNLGFIIVTKKSTEGKQDLFIVDQHASDEKYNFENFQ---KNTQFLS 748 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKNIP 510 Q L+ P+ I+L + L+ ++ E + G E I + IP Sbjct: 749 QPLVVPQFIELNLLDEVLVQDNIEIFSKNGFSIKFQEENEAGKRIQLLSIPMSKGTVFDI 808 Query: 511 QLLRDIIDEIIDSST-------TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 +++ + ++ + +I ++ A AC SI G+ + M R++ Sbjct: 809 ADFHELVHLLKENQGISKENLLAHVRPSKIRSMFAMRACRASIMIGKSLSMKTMTRVVHH 868 Query: 564 MEKNPNSSQCNHGRPTFIKL-KLSDI 588 + C HGRPT L +LSD+ Sbjct: 869 LSGLDKPWNCPHGRPTMRHLIELSDL 894 >gi|240278280|gb|EER41787.1| DNA mismatch repair protein [Ajellomyces capsulatus H143] Length = 1515 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 96/444 (21%), Positives = 175/444 (39%), Gaps = 43/444 (9%) Query: 9 KIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEI 68 +++QI +G++I +KEL+ENSLDA ++ ++ G ++ DNG G++ ++ Sbjct: 457 ALVHQIQSGQVIVDLCSVVKELVENSLDAGATSLDIRFKNNGLDLIEVQDNGKGISPDDY 516 Query: 69 PMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTGAQIAISG 125 +H TSK+S DD S++ TFGFRGEAL S+ A+S +++ +++ Sbjct: 517 ETVALKHYTSKLSKFDDLSSLQTFGFRGEALSSLCALSSFHIITAQAHEVPKASRLEFEI 576 Query: 126 E-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIAYPKVS 183 K+ S VA GT V +LF +P R K+ + E + ++ A V Sbjct: 577 SGKLKSTHTVAGQKGTTASVENLFNRLPVRRRELEKNIKREYGKVLGLLHAYACISTGVR 636 Query: 184 FTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEK-------------- 227 F + +T N E IS + G + LN + Sbjct: 637 FNVKNQMPKGKSVVVFATKSNTSTNENISNIYGAKTLLALTPLNLELEFKPSGMGKRLIG 696 Query: 228 -----SNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 N+I +QG+ P F R ++ F+N R I Y + + Sbjct: 697 AGTNDPNKIFVQGHISRPIFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYKSF-NISQ 755 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK 340 P + ++D DVNV P K I + + + S+ + L ++ Sbjct: 756 SPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKVSL------------TELFER 803 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 + Q +S TN + F+ + + ++ S++ ++ N+ +E Sbjct: 804 QDQTVPQSQVSGKQSMLQHSSGTNIPK--FISKKSVESSAPQRSEEIVEADGNNEEDEQT 861 Query: 401 ATHYQLGIACAQIHQNYIISQTTD 424 A + + Y I + + Sbjct: 862 AMRAFVQRFTGRSTTAYDIPEIPE 885 Score = 127 bits (318), Expect = 6e-27, Method: Composition-based stats. Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 32/203 (15%) Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 S D + I+DQHA+ E+ FE+++ T + +Q L+ P+I+ L E +I Sbjct: 1276 DSRAFPSHKNDEVFIIDQHASDEKYNFERLQ---AETVVQNQRLVKPKILTLTAVEEEII 1332 Query: 474 MEHDEDLHRLGIKAE--RFGPNAI----AIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 +++ L + G E R G I + +P Q L ++I + +S T Sbjct: 1333 IDNLPTLEKNGFVVEVDRSGDEPIGRRCKLTSLPLSKEMVFDTQDLEELIVLLGESPQTQ 1392 Query: 528 ----------------------TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 ++ + A AC SI G+ + + +M+ ++R M Sbjct: 1393 SASSPSSSDSVLTPTTFGSKYIPRPSKVRKMFAMRACRSSIMIGKTLTNKQMDCVVRHMG 1452 Query: 566 KNPNSSQCNHGRPTFIKL-KLSD 587 C HGRPT L L + Sbjct: 1453 MIDKPWNCPHGRPTMRHLMSLGE 1475 >gi|224055913|ref|XP_002195180.1| PREDICTED: PMS1 postmeiotic segregation increased 1 [Taeniopygia guttata] Length = 929 Score = 237 bits (605), Expect = 4e-60, Method: Composition-based stats. Identities = 80/333 (24%), Positives = 156/333 (46%), Gaps = 17/333 (5%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + I +++ ++I +KELIENSLDA ++ ++ + G S ++ DNG G+ Sbjct: 2 KQLPGETIRLLSSSQVITSVVSVVKELIENSLDASATGIDIKLENYGFSKIEVRDNGSGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 +++P+ +H TSKI S+D + T+GFRGEAL SI ++S + + ++ ++ Q Sbjct: 62 KVDDVPVMAIKHYTSKISSSEDLERLTTYGFRGEALGSICSISEVLVTTKTAADDFSIQY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 A+ ++S +P + GT V V +LF +P R F + + E + D++ I Sbjct: 122 ALDSNGHVTSKKPSHLGQGTTVTVLNLFKNLPVRKQFYSTNRKCKEELKKVQDLLTAYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE--LNEKSNEITLQG 235 P + T + K+ ++ ++ + ++G +++ V + EI L G Sbjct: 182 IKPDLRITLTHNKAVIWQ---KTRVSDHKMACMSILGTAVMSSMVPFQHCCEYPEINLSG 238 Query: 236 YTGI-----PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 + + ++ + ++FIN R V K I + YPV L + + Sbjct: 239 FLPKAESDTSLTSLSSSERSFIFINNRPVLQKEIRQYYSQVTQKECTRS-YPVFFLSITV 297 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ 323 VDVN+ P K+ + + + ++ Sbjct: 298 PASAVDVNITPDKTQVLLHYKESVLLAVENVLK 330 >gi|198419514|ref|XP_002120346.1| PREDICTED: similar to predicted protein [Ciona intestinalis] Length = 803 Score = 237 bits (605), Expect = 4e-60, Method: Composition-based stats. Identities = 83/347 (23%), Positives = 156/347 (44%), Gaps = 26/347 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I + +K ++QI +G++I A+KEL+ENSLDA ++ VE + G ++ D+G G Sbjct: 4 IEAIDKKSVHQICSGQVIVDLPTAVKELVENSLDAGATNVEIRLKSFGLLSIEVIDDGHG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +H TSK+++ D + TFGFRGEAL S+ AV + + ++ ++G + Sbjct: 64 VEERNFHGLTMKHHTSKLTNFTDLRLVETFGFRGEALSSLCAVCDVIICTKHNNASSGHR 123 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARL-NFLKSEQVETNLITDVIRRMAIA 178 ++ + E ++S P A GT V +R++F TIP R F+K+ + E + + +++ + Sbjct: 124 MSFNHEGHMTSKTPCARRIGTSVILRNIFSTIPVRRKEFMKNIKKEYSKLLNLVSAYCVV 183 Query: 179 YPKVSFTFST--IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE---------- 226 +V T S + E I + G N E + Sbjct: 184 STRVKITCSNETDGGKKTTSLSTGGATTMEENIISIFGSKQFRNLQEFRQDIPTQESCDT 243 Query: 227 -------KSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP 277 + L G+ +P R + ++ + F+N R + + + Y Sbjct: 244 YNVSVASDWSIFKLHGFVSVPRHGAGRSSPDRQFFFVNSRPITLPRLSKIVNEVYHRF-N 302 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQK 324 ++P + + + VDVNV P K + F+N ++ + S+ + Sbjct: 303 RHQFPFIAINITTRHDLVDVNVTPDKRKVFFQNENLLFAIMTSSMTQ 349 Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 50/251 (19%), Positives = 96/251 (38%), Gaps = 11/251 (4%) Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 Q P + + + + + + T + + + + + + +Q Sbjct: 556 QPVLPDQNNGQPVLPDAKHPSNIEPSQPPTEYSLFRANLADTTTAEAELTKNLDKSSFQQ 615 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q + ++I + + L I+DQHA+ E +E ++ + + +Q L+ P + L Sbjct: 616 MAPVGQFNLGFVIGRHGNDLFIIDQHASDEIYNYETLQ---ATQTLQTQNLVVPLKLQLT 672 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIA------IREIPAILSKKNIPQLLRDIIDEI 520 +++E+ E + G + + IP P + ++I + Sbjct: 673 PAGKIVLIENLEIFRKNGFGFKISSDEGKMLFDRRQVSYIPTHNPHPLGPPDIDEMIFML 732 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 D+ R+ I AT AC S G + +M RL+R M + + C HGRPT Sbjct: 733 SDAPGVMCRPTRVRRIFATRACRMSTMIGTSLTKRQMLRLIRHMSEIVHPWNCPHGRPTM 792 Query: 581 IKLKLSDIEKL 591 L DI KL Sbjct: 793 RHL--IDIGKL 801 >gi|57529802|ref|NP_001006508.1| PMS1 protein homolog 1 [Gallus gallus] gi|53130658|emb|CAG31658.1| hypothetical protein RCJMB04_9d22 [Gallus gallus] Length = 916 Score = 237 bits (604), Expect = 4e-60, Method: Composition-based stats. Identities = 108/491 (21%), Positives = 202/491 (41%), Gaps = 32/491 (6%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++LS + + ++ ++I +KELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLSAETVRLFSSSQVITSVVSVVKELIENSLDASATTIDIRLENYGFDKIEVRDNGNGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 ++P+ +H TSKI S+D + T+GFRGEAL SI +S + + +R ++ Q Sbjct: 62 KVADVPVMAIKHYTSKISSSEDLERLTTYGFRGEALGSICCISEVLVTTRTADDDISTQY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + ++S +P + GT V V LF +P R F + + E + D++ I Sbjct: 122 VLDSSGHVTSQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTNRKCKEELKKVHDLLIAYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE--LNEKSNEITLQG 235 P++ TF K+ ++ N S + V+G + + V + EI L G Sbjct: 182 IKPELRITFVHNKAVIWQKNRVS---DHKMACMSVLGTAVMGSMVPFQHCCEDPEINLSG 238 Query: 236 YTGI-----PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 + + ++ + ++F+N R V K IL + + YPV L + + Sbjct: 239 FLPKAESDSSLTSLSSSERSFIFVNSRPVHQKEILKY-YSVLMQKDSTRLYPVFFLNITV 297 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 VDVNV P K+ + + + + ++ + S +K ++S Sbjct: 298 PASAVDVNVTPDKTEVLLQYKESVLLAVENVLKSLYGPLPATVSGEANKTDVTSEDMFVH 357 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV--EESEATHYQLGI 408 Q + + E S N+ L + S ++D + + T L Sbjct: 358 KAG------------QTDVVVNEKEPSGNNDLHAHTSFLSFNSDVQSYQAGKNTEICLNH 405 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEG 468 + + + RL+ E+ ++ N+T I S + EG Sbjct: 406 QIFSGDTVHSCLEEKEASKNDAFQEGSLRLLCEEEQKGQNTTGIPSNSAPVDPGSK-EEG 464 Query: 469 ECALIMEHDED 479 C L ++ E+ Sbjct: 465 GCLLSSDNAEE 475 >gi|169606051|ref|XP_001796446.1| hypothetical protein SNOG_06058 [Phaeosphaeria nodorum SN15] gi|160706903|gb|EAT87122.2| hypothetical protein SNOG_06058 [Phaeosphaeria nodorum SN15] Length = 1051 Score = 237 bits (604), Expect = 5e-60, Method: Composition-based stats. Identities = 95/419 (22%), Positives = 168/419 (40%), Gaps = 46/419 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRV------------ETVIAGG 49 I+ + + ++QI +G++I KEL+ENS+DA ++ V E Sbjct: 3 SIKPIEGRSVHQIQSGQVIVDLQSVCKELVENSIDAGATTVGVVGGRRLTCDAEVRFKNN 62 Query: 50 GKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLT 107 G ++ DNG G++ ++ +H TSK+S DD S++ TFGFRGEAL S+ A+S+ Sbjct: 63 GLDAIEVQDNGGGISPDDYETIALKHYTSKLSSYDDLSSLQTFGFRGEALSSLCALSNFH 122 Query: 108 LMS-RPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVE 164 +++ RP + G ++ K+ VA GT V V LF+ +P R K+ + E Sbjct: 123 IITARPTDGSKGTKLEFEQSGKLKGTSVVAAKQGTTVVVETLFYNLPVRRKELEKNIKRE 182 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL 224 N + ++ A V FT T + ++N + + IS V G I+ + L Sbjct: 183 YNKVLQLLNAYACISVGVKFTRLTDSRKKTIAFSTNSNASTRDNISNVYGAKTISALIPL 242 Query: 225 NEKSNE-------------------------ITLQGYTGIPTF--NRGNANQFYVFINGR 257 N + + L G+ P R ++ F+N R Sbjct: 243 NLEFEMDASNRPGSTQTARNWSTQEDPGSRTVKLVGHISRPVVGEGRLTPDRQMFFVNSR 302 Query: 258 TVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 + I Y + + P + +++D DVNV P K I + ++ Sbjct: 303 PCNLPQVAKAINEVYKSY-NITQSPFIFADIQLDTNAYDVNVSPDKRTIMLHDQVVLLES 361 Query: 318 IIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL 376 + +++ S + P T +P+ +T+ E+ +E Sbjct: 362 LKEALLDLFEGHDQSVPQAQLSVKKTPASAFKTP-TLVPRESTATLMVDERSDSEEPAA 419 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 26/205 (12%) Query: 401 ATHYQLGIACAQIHQNYII-------SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 + Q + +II + T L I+DQHA+ E+ FE++ +T + Sbjct: 805 KPDFNEMRIIGQFNLGFIIAVRPPTTTSPTSDLFIIDQHASDEKYNFERL---SATTTLV 861 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE-------RFGPNAIAIREIPAILSK 506 SQ L+ P ++L E +I+ ++ L G E G A I +P Sbjct: 862 SQRLVHPHPLELTAVEEEIILANEHALTANGFVVEMDTADDLDSGHRAKLI-SLPMSKEV 920 Query: 507 KNIPQLLRDIIDEIIDSSTTYTL--------QDRIENILATMACYGSIRSGRKMQSIEMN 558 P L +++ I+D+ + T+ ++ +LA+ AC S+ G+ +++ M Sbjct: 921 TFTPTDLEELLALILDNPPSSTMATSTHIPRPSKVRKLLASRACRSSVMIGKTLKTARMR 980 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKL 583 ++R M C HGRPT L Sbjct: 981 EIVRHMGSMDKPWSCPHGRPTMRHL 1005 >gi|149240297|ref|XP_001526024.1| hypothetical protein LELG_02582 [Lodderomyces elongisporus NRRL YB-4239] gi|146450147|gb|EDK44403.1| hypothetical protein LELG_02582 [Lodderomyces elongisporus NRRL YB-4239] Length = 948 Score = 237 bits (604), Expect = 5e-60, Method: Composition-based stats. Identities = 93/400 (23%), Positives = 180/400 (45%), Gaps = 28/400 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ ++ I++I +G++I +KEL+EN++DA + ++ A G + DNG Sbjct: 1 MSIQGINATDISKITSGQVIIDLRSIVKELVENAIDASAKKILVNFANYGIDSITVQDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNT 117 G++ + R TSKI +D S + T GFRGEAL SI A++ +++ +R +N Sbjct: 61 KGISENDFDTVCLRSHTSKIKEFEDLSKLGTLGFRGEALNSICALANKVSIKTRTLDSNP 120 Query: 118 GAQIAISGE------KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITD 170 I + ++ GT+V + +F P R NF+K+ + E + Sbjct: 121 ICHILDFDQFGALVKNTKKRGDMSTPSGTVVTIESIFKKFPVRWKNFIKNSKKEFHKTVS 180 Query: 171 VIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP---ERISQVIGEDFINNAVELNEK 227 I + YP + F + + + + + S G E + + G + N +E+N + Sbjct: 181 FITNYLLIYPTIKFEVTNVNNGKRSLILSSRGGENNTSTENLISIFGTNGNTNLLEINLQ 240 Query: 228 SN-EITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 N +I++ G+ +F G + ++ ++F+N R + K + I Y + ++PV Sbjct: 241 INKDISIAGHISSYSFGLGRSTQDRQFLFVNKRPIVYKKLAKIINEIYKSFNHV-QFPVY 299 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 +L L+I+P +DVN+ P K+ + N + I +S+ K Sbjct: 300 ILNLDINPEAIDVNLLPDKTSVLVHNEDKVLELIRESLITFYETKDEVV----------- 348 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 ++ + +P S+ KL + + + N+ L + Sbjct: 349 IPRNTQSQYTIPSRTHSMDEASTKLDQSKRQSNINETLKA 388 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 8/199 (4%) Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 S D + + + T + Q + +I+ L I+DQHA+ E+ FE++ + F Sbjct: 738 SLDEQEIYQIKKTDFLDMKLIGQFNLGFILVCHGSNLFIIDQHASDEKFNFERLLETFA- 796 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILS 505 + Q L+TP +DL + L+++H++ G K ++ I++ +P + Sbjct: 797 --VNYQPLITPLFVDLNVIDEMLVLDHEQIFQNNGFKISVDYDKPAGAKISLTSLPVYKN 854 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQ-DRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 ++I+ I + + ++ +I I+A AC SI G + M +++ + Sbjct: 855 IMFSVDDFYELINLINEQPSNRNIKCSKIRKIVAMKACRSSIMIGSFLSKQRMQKVVANL 914 Query: 565 EKNPNSSQCNHGRPTFIKL 583 K C HGRPT L Sbjct: 915 SKLDKPWNCPHGRPTMRHL 933 >gi|115384270|ref|XP_001208682.1| hypothetical protein ATEG_01317 [Aspergillus terreus NIH2624] gi|114196374|gb|EAU38074.1| hypothetical protein ATEG_01317 [Aspergillus terreus NIH2624] Length = 1049 Score = 236 bits (603), Expect = 7e-60, Method: Composition-based stats. Identities = 92/452 (20%), Positives = 173/452 (38%), Gaps = 33/452 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I KEL+ENSLDA ++ +E G ++ DNG Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVAKELVENSLDAGATSIEVRFKNSGLDAIEVQDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPP-QNNTG 118 G++ + +H TSK+S DD S ++TFGFRGEAL S+ A++ +++ + Sbjct: 63 GISRDNYENIALKHYTSKLSSFDDLSRLNTFGFRGEALSSLCALADFHIVTAQAHEAPKA 122 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ K+ + VA GT V +F +P R K+ + E + +++ A Sbjct: 123 NRLEFEPSGKLKRTQIVAGQKGTTASVEGIFKRLPVRRRELEKNIKREYGKVLNLLHAYA 182 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELN--------- 225 V F+ + ST GN E I+ V G + + L+ Sbjct: 183 CVSTGVRFSVKNTVGKTRNVVVFSTKGNPTTKENIANVYGAKTLLALIPLDLTLEFEPSV 242 Query: 226 --------EKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 E N+I ++G+ P F R ++ F+N R I Y Sbjct: 243 AGRRASAGEALNQIRVRGHVSRPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYKSF 302 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS 335 + + P V +D DVNV P K I + + + + ++ + S Sbjct: 303 -NVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESL----KTSLTEVFESADQ 357 Query: 336 VLSKKMISSFHQDNAPKTH--LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 + + +S Q + + S +E + +++ S ++ Sbjct: 358 TVPQSQVSGAKQPGSKPNSTLFQSFLASKHAPEETPADGDGSGVADEIGSSQASSHGRMK 417 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDG 425 + + + Q H + ++ Sbjct: 418 SFLSDLGSRPGQADTKSTPAHVDTSTQESQPM 449 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 60/326 (18%), Positives = 121/326 (37%), Gaps = 41/326 (12%) Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 P V+ N+ + + ++ I Q+ ++A +G + + + Sbjct: 679 PPPVETNMGEE--EKKKHDEAEVQRLIQQAEEQASLPQGNNVNRANKMNKGAYHRDSTVQ 736 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES---EATHYQLGI 408 + S + + RL +D T S++ S + Sbjct: 737 LVSTMDGSVSRVQSLMGKLQESARLPGRIGGDEEDATGSQETAEERLSLTVSKDDFAQMR 796 Query: 409 ACAQIHQNYIISQT-------------TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 Q + +I++ D L I+DQHA+ E+ FE+++ T + +Q Sbjct: 797 IIGQFNLGFILATRSSRDSSNSAISASKDELFIIDQHASDEKFNFERLQ---AETVVQNQ 853 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE-------RFGPNAIAIREIP----AIL 504 L+ P+ +DL E +++E+ L + G E G + +P + Sbjct: 854 RLVQPKRLDLTAVEEEIVIENQAALEKNGFIVEVDDSGDEPIGRRCKLV-SLPLSKEVVF 912 Query: 505 SKKNIPQLLRDIIDEIIDSSTTY-------TLQDRIENILATMACYGSIRSGRKMQSIEM 557 +++ +L+ ++ E+ + TT ++ + A AC SI G+ + + +M Sbjct: 913 GVRDLEELIV-LLSEMPATGTTGGASDRYVPRPSKVRKMFAMRACRSSIMIGKTLTTKQM 971 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKL 583 R++R M C HGRPT L Sbjct: 972 ERVVRNMGTIDKPWNCPHGRPTMRHL 997 >gi|189197831|ref|XP_001935253.1| DNA mismatch repair protein PMS1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981201|gb|EDU47827.1| DNA mismatch repair protein PMS1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 848 Score = 236 bits (603), Expect = 7e-60, Method: Composition-based stats. Identities = 94/422 (22%), Positives = 166/422 (39%), Gaps = 38/422 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I KEL+ENS+DA ++ VE G ++ DNG Sbjct: 6 TIKAIEGRSVHQIQSGQVIVDLQSVCKELVENSIDAGATSVEVRFKNYGLDAIEVQDNGS 65 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMS-RPPQNNTG 118 G+ ++ +H TSK++ DD + + TFGFRGEAL S+ A+S+ +++ R + G Sbjct: 66 GIAPDDYETIALKHYTSKLATYDDLALLQTFGFRGEALSSLCALSNFHIVTARASDGSKG 125 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ K+ + VA GT V V LF +P R K+ + E N + ++ A Sbjct: 126 TRLDFEQSGKLKATSVVAAKQGTTVVVETLFHNLPVRRKELEKNIKREYNKVLQLLNAYA 185 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNF--PERISQVIGEDFINNAVELNEKSNE---- 230 V F+ S K STN N + IS V G I V L + Sbjct: 186 CISVGVKFSVSNQIPKGKKTIAFSTNANTSTRDNISNVYGAKTIAALVPLALEFAMDPSN 245 Query: 231 ---------------------ITLQGYTGIPTFN--RGNANQFYVFINGRTVQDKFILST 267 + + G+ P R ++ F+N R + Sbjct: 246 RPGATQTARNWSTQEDPGSRTVKIVGHISRPVVGEGRQTPDRQMFFVNSRPCTLPQVAKA 305 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI- 326 Y + + P + +++D DVNV P K I + T + + S+ + Sbjct: 306 FNEVYKSY-NVTQSPFIFADIQLDTNAYDVNVSPDKRTIMLHDQTALLENLKNSLIELFE 364 Query: 327 --NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 ++ + + K S+F + + + +EN +T + + Sbjct: 365 GQDQSMPQSQLLGKKTPTSAFKPPTMQRRDSEERVVRPLPRSKVESNRENDQTTEERMCH 424 Query: 385 DD 386 Sbjct: 425 PK 426 Score = 77.0 bits (188), Expect = 8e-12, Method: Composition-based stats. Identities = 55/342 (16%), Positives = 119/342 (34%), Gaps = 42/342 (12%) Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 P + + F R ++ +TI ++I L + + + Sbjct: 515 PQKSLSQSTIQNAFDRMRPMRTAVQQATITELDTKSISDAEE---ELQADPESSDDEYMD 571 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKA-----INKKGISTSSVLSKKMISSFHQDNAPKTH 354 + + R I I ++ + A +N K + + +K + + + +T Sbjct: 572 D---TEKKAREEAKIVQLITEAEEAAAQPTEMNVKRMKNMFKIMQKKYWTINLERVIETD 628 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP--VEESEATHYQLGIACAQ 412 + + Q+ + + +LPS + D + + + Q Sbjct: 629 AESISRDIHELQKAIDTSPANTTDKSMLPSSAQLHDADPEERLSLTVTKSDFHDMRIVGQ 688 Query: 413 IHQNYII-------SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 +Q +II + T L I+DQHA+ E+ FE++ +T + SQ L+ P ++L Sbjct: 689 FNQGFIIAVRPPTSTAPTSDLFIIDQHASDEKYNFERL---AATTVLVSQRLVHPHPLEL 745 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNA-----------IAIREIPAILSKKNIPQLLR 514 E +I+ ++ L G E + + +P P L Sbjct: 746 SAVEKEIILANEHALLANGFVIETTDADEETPNPNNTTTTAHLTSLPMSKEITFSPTDLE 805 Query: 515 DIIDEIIDSSTTY--------TLQDRIENILATMACYGSIRS 548 +++ I+D+ + ++ +LA+ AC S+ Sbjct: 806 ELLALILDNPPSSSTSTSPYIPRPTKVRKLLASRACRSSVMI 847 >gi|221101995|ref|XP_002170168.1| PREDICTED: similar to PMS1 protein homolog 1 [Hydra magnipapillata] Length = 425 Score = 236 bits (602), Expect = 8e-60, Method: Composition-based stats. Identities = 94/323 (29%), Positives = 159/323 (49%), Gaps = 14/323 (4%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 KL + I + ++I +KEL+ENSLD+ ++ + G S ++ DNG G+ Sbjct: 3 KLPLSTVELITSTQVIISLVSVVKELVENSLDSGCDSIDVRLDENGLSKIEVQDNGTGIA 62 Query: 65 SEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 E+I ++H TSKI + D N+ +GFRGEAL SI +V + + ++ + + + Sbjct: 63 LEDIQYVCKQHYTSKIRNELDLLNLTQYGFRGEALFSICSVGDVFITTKTKADQVSKKYS 122 Query: 123 ISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETN---LITDVIRRMAIA 178 S +I S N GTIV V +LF +P R ++ + I +++ IA Sbjct: 123 FSKYGEIISSEITHHNVGTIVTVLNLFKALPVRRKLYENNRKVREEVKCIEELLISYGIA 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 PK+ T K+ ++ + N +S + G + +NN E+ K E+ ++ Y Sbjct: 183 MPKLRITLKYDKNIIWR---KDRAANCSLVLSALFGSNVLNNLKEIEYKDEELQVKAYIP 239 Query: 239 I-----PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 R A++ ++ +N R V+ K I S ++T+Y G+YP VL++E+ P Sbjct: 240 KVGSASNVVGRTLADRMFIIVNKRPVRSKEIKSLLKTSYNNNCCQGKYPFSVLMIEVKPD 299 Query: 294 QVDVNVHPAKSYIRFRNPTIIRN 316 Q+DVN+HP K I +N I N Sbjct: 300 QIDVNLHPNKMDILLQNTVSILN 322 >gi|145348213|ref|XP_001418550.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578779|gb|ABO96843.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 829 Score = 236 bits (602), Expect = 8e-60, Method: Composition-based stats. Identities = 77/346 (22%), Positives = 148/346 (42%), Gaps = 22/346 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+++ + ++++I +G+++ + +KEL+EN+LDA ++ VE + G +++DNG G Sbjct: 1 IKRIDDVVVHRICSGQVVLSLASCVKELVENALDAGATNVEIRLKDHGADVVEVSDNGSG 60 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGA 119 + ++ TSK+ +D + TFGFRGEAL S+ +S ++ +R + +G Sbjct: 61 VPKASFEALTTKYATSKLKAFEDLETLRTFGFRGEALSSLCGISGEFSVTTRTADDASGT 120 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 +I + I S V + GT V LF + R ++ + E V++ A+ Sbjct: 121 KIVYDAKGAIVSESVVPRSVGTTATVCRLFEPLAVRRKEFLRNVKREYGRALHVVQAYAL 180 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNG----NFPERISQVIGEDFINNAVELNE------- 226 V + + N T G + E + V G + E++ Sbjct: 181 MSKSVRILCTHQSGKYGRTNVLHTRGGEEASVRENVVTVFGAKMVAAMQEIDFDLSDADG 240 Query: 227 ---KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY 281 S + GY G A ++ + ++NGR V + + Y P + Sbjct: 241 DGSSSLTCRIVGYVSKAQNGCGRAGTDRQFYYVNGRPVDLPRVAKVLNETYRSFNP-NQA 299 Query: 282 PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 P+ VL +++ DVNV P K + + + + + +A Sbjct: 300 PMAVLDVQLPTDSYDVNVTPDKRKVMLHQEQELLTKMKEKLTEAFA 345 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 75/226 (33%), Gaps = 49/226 (21%) Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + Q + +I++ D L IVDQHA+ E FE++++ +T Q L+ P Sbjct: 606 DFAKMRIVGQFNLGFILAVLGDDLFIVDQHASDEIYNFERLQRTST---LTRQPLIHPVP 662 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGP------------------NAIAIREIPAIL 504 +DL E ++++ + G A+ + +P + Sbjct: 663 LDLTASEEQTVLQNMPVFLQNGFGFCDVAETVPGADMNNSSIDPTARCGALRLNAVPFLK 722 Query: 505 SKKNIPQLLRDIIDEIIDSSTTYT----------------------------LQDRIENI 536 + +++++ + + + Sbjct: 723 NVAFDKSDVQELVSMLDQGQHSLPSKSQLSIGLAREDAAAARSRRDASPRVLRPSKTRAA 782 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 LA AC SI G + + M R+LR + C HGRPT Sbjct: 783 LAMKACRSSIMIGDALDARSMRRVLRNLGALDAPWNCPHGRPTMRH 828 >gi|240952144|ref|XP_002399323.1| DNA mismatch repair protein, putative [Ixodes scapularis] gi|215490529|gb|EEC00172.1| DNA mismatch repair protein, putative [Ixodes scapularis] Length = 837 Score = 236 bits (602), Expect = 9e-60, Method: Composition-based stats. Identities = 80/392 (20%), Positives = 168/392 (42%), Gaps = 27/392 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + +++I +G+++ ++A+KEL+ENS+DA + + + G ++ D+G G Sbjct: 5 IKAIDRASVHRICSGQVVLNLAMAVKELVENSIDAGARSISVRLKEYGSKLVEVVDDGDG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + ++ TSK+ D D ++ TFGFRGEAL S+ A+ +L++ + G Sbjct: 65 VEEANFEGLTLKYHTSKLRDFSDLQDVATFGFRGEALSSVCALCNLSISTCHKDAAQGTL 124 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + I+S +P A T V + +LF T+P R FL + + E N + ++ + Sbjct: 125 LKFDHHGAITSRKPCAREASTTVSLENLFVTLPVRHKEFLSNLKREFNKMAALLTGYCLV 184 Query: 179 YPKVSFTFST--IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN------- 229 V+ T + + + + + ERIS V G + +E+ Sbjct: 185 ATGVNITCTNHLDGGRKQMVLSSQGSTSVRERISAVFGAKETSRLLEIEHCPPSDEVLEE 244 Query: 230 ------------EITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + ++G+ R ++++ ++FIN R + + + A T Sbjct: 245 FSLTDAVLDDSARLRIEGFVSTCAHGGGRSSSDRQFIFINSRPCELPKVKRLLVNAVYHT 304 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS 335 +YP + + + + R VDVNV P K + + + + +++ S Sbjct: 305 FNRDQYPFLFINIHLQRRDVDVNVTPDKRSVFLHHEKHLLALVKVGTSSVESEEASSFDV 364 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQE 367 + + ++++A + ++ T +Q Sbjct: 365 TSTSAFEPNSNEEDALDVDRSQMSSQATTSQA 396 Score = 130 bits (326), Expect = 9e-28, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 88/208 (42%), Gaps = 8/208 (3%) Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 S + +N+ +E + Q + +I+++ D L IVDQHAA E+ F Sbjct: 625 AAISPSDNAAAENELAKEISKDMFGQMEIIGQFNLGFIVAKLGDDLFIVDQHAADEKYNF 684 Query: 441 EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE----RFGPNAIA 496 E++ +D Q LL P+ ++L ++++E+ E + G E + + Sbjct: 685 ERLERDTVMKG---QKLLAPQPLELTAVNESVLIENREVFEKNGFAFEVDESQPSGRKVK 741 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 + +PA S + + + ++ T ++ + A+ AC S+ G + E Sbjct: 742 LVSVPASGSWQFGKEGKCRLFRRLVYCQHTVCRPSKVRQMFASRACRKSVMVGMPLTISE 801 Query: 557 -MNRLLREMEKNPNSSQCNHGRPTFIKL 583 +++ + + + C HGRPT L Sbjct: 802 SFFQVVSHLGELHHPWNCPHGRPTMRHL 829 >gi|126326745|ref|XP_001378642.1| PREDICTED: similar to homolog of yeast mutL gene [Monodelphis domestica] Length = 936 Score = 236 bits (602), Expect = 9e-60, Method: Composition-based stats. Identities = 92/358 (25%), Positives = 162/358 (45%), Gaps = 19/358 (5%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ ++I IKELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQVITSVISVIKELIENSLDAGATNIDVKLENYGFDKIEVRDNGDGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ +H TSKI +D N+ T+GFRGEAL SI ++ + + ++ +N Q Sbjct: 62 KAIDAPVMAIKHYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTKTAADNFSTQY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F + + E I D++ I Sbjct: 122 VLDSSGHIVSQKPSHLGQGTTVTALKLFKNLPVRKQFYSTARRCKDELKKIQDLLIAYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P++ F+ K ++ +S + + V+G ++N E + + ++I L G Sbjct: 182 LKPELRIIFTHNKVIIWQ---KSRVSDHKTALMAVLGTSIMSNMAAFEHHYEESQIYLSG 238 Query: 236 YTGIPTFNRGNAN-----QFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + N + ++FIN R V K IL IR Y E YPV + Sbjct: 239 FLPKLDSDHSLTNLSTPERSFIFINNRPVHQKDILKLIRHYYTEKCLKESTRSYPVFFMK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF 345 + + VDVN+ P KS + +N + + + + S +K +SS Sbjct: 299 IVVPAADVDVNLTPDKSQVLLQNKESLLIAVENVLTSWYGPLISTDSHENNKADVSSV 356 >gi|301766588|ref|XP_002918705.1| PREDICTED: PMS1 protein homolog 1-like isoform 1 [Ailuropoda melanoleuca] gi|281351918|gb|EFB27502.1| hypothetical protein PANDA_007219 [Ailuropoda melanoleuca] Length = 930 Score = 236 bits (602), Expect = 9e-60, Method: Composition-based stats. Identities = 94/421 (22%), Positives = 171/421 (40%), Gaps = 19/421 (4%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R +N Q Sbjct: 62 KAVDTPVMAIKYYTSKIGSHEDLENLTTYGFRGEALGSICCVAEVLITTRTASDNFSTQY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + G I S +P + GT V LF +P R F K + E + D++ I Sbjct: 122 VLDGNGHIISQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKVQDLLISYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P + F K+ ++ ++ + + V+G + N + + + ++I L G Sbjct: 182 LKPDLRIVFIHNKAVIWQ---KTRVSDHKMALMSVLGTAVMGNMESFQYHSEESQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YP+ L Sbjct: 239 FLPKRDADHSLTSLSTPERSFIFINSRPVHQKDILKLIRQYYTLKCLKESTRLYPIFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 +++ VDVN+ P KS + +N + + + + S +K +SS Sbjct: 299 IDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGSLPSTNSYENNKTDVSSADM 358 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 T + ++ + + DD + N + Sbjct: 359 VVNNTTETDVLFNKMESSGNNYANVDTSVIPFQNDVHDDRSGKNTNYCLNPQIHVDDHYD 418 Query: 408 I 408 Sbjct: 419 E 419 >gi|323142174|ref|ZP_08077010.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Phascolarctobacterium sp. YIT 12067] gi|322413346|gb|EFY04229.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Phascolarctobacterium sp. YIT 12067] Length = 167 Score = 236 bits (602), Expect = 9e-60, Method: Composition-based stats. Identities = 71/159 (44%), Positives = 103/159 (64%), Gaps = 2/159 (1%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R L NQIAAGE++E+P+ +KEL+EN+LDA + ++E I GG + ++TDNG GM Sbjct: 8 RLLDTNTANQIAAGEVVEKPASVVKELVENALDAGADKIEVTIFAGGTEYIRVTDNGCGM 67 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + MAV RH TSK+ ++D +++T GFRGEALPSI +VS+ TL++RP + Sbjct: 68 SEADAKMAVLRHATSKLTKAEDLLSLNTLGFRGEALPSIASVSNFTLLTRPESEEFATSV 127 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 I G + + V + GT V V +LFF +PAR FLK+ Sbjct: 128 HIDGGENTEVTASGGSTGTTVIVENLFFNVPARRKFLKT 166 >gi|124512056|ref|XP_001349161.1| mismatch repair protein pms1 homologue, putative [Plasmodium falciparum 3D7] gi|23498929|emb|CAD51007.1| mismatch repair protein pms1 homologue, putative [Plasmodium falciparum 3D7] Length = 1330 Score = 235 bits (600), Expect = 2e-59, Method: Composition-based stats. Identities = 94/489 (19%), Positives = 201/489 (41%), Gaps = 41/489 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI+ + E+ I+ I + ++I S +KEL+ENS+DA++S ++ + G ++ DNG Sbjct: 1 MKIKNIGEESIHNICSSQVIFTLSSVVKELVENSIDADASEIKIKLVESGIKLIEVNDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFS-NIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+ RH TSKI D D +++T GFRGEAL S+ +S++ + ++ +N+ Sbjct: 61 VGIKKINFENICARHATSKIKDFNDIHSSLNTLGFRGEALNSLCMLSNVNITTKNEENDH 120 Query: 118 GAQIAISG-EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRM 175 + ++ P+A GT V ++F IP R K+ + + + + ++++ Sbjct: 121 AYLLKFDKLGRLYHEEPIARLRGTTVSCENIFHNIPIRKKDFIKNIKTQVSDLLLLMQQY 180 Query: 176 AIAYPKVSFTFSTI-----KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE 230 AI Y + F I + + + + + + G+ I N +E N NE Sbjct: 181 AIIYHNIKFVIYNIVTSKGCTKNMNLLITNGTDSIKKNFYSIYGKRNIGNLIEFNIDGNE 240 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 ++GY R + + + +IN R + ++ + YP+++ + Sbjct: 241 WNIRGYISDSNSGRRDKDLQFYYINSRPIHILKNVNKLINTIYREFNSRLYPIIICNILS 300 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS------------IQKAINKKGISTSSVLS 338 D + +D+NV P K + F + + + I I+ + +++L Sbjct: 301 DTKNIDINVTPDKREVFFTFEQEMCEHMKTALVKLFTPKTSNLIDTQIDDYFLKANNILP 360 Query: 339 KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLS------------------TND 380 ++ S+ + + S + +Q+ ++ + + Sbjct: 361 NQIKSNIKLETHEHDDNHHHHKSTSPSQKHKGNEKPNDNIIKMEPNYNNEVTHHAYVKKE 420 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN-YIISQTTDGLVIVDQHAAHERLI 439 L+ DD Y + + +++ + H + H N + + + + ++ Sbjct: 421 LIHKDDQIYVKQEEMKDQNNSYHIEKDNDIDAEHCNRHEFGEEKENIFTYHDDRQLFKIK 480 Query: 440 FEKMRQDFN 448 EK+ N Sbjct: 481 EEKIYNYPN 489 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 73/221 (33%), Gaps = 56/221 (25%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L I+DQHAA E+ FEK + F + SQ L++ + + + +I ++ + G Sbjct: 1065 LFIIDQHAADEKSNFEKYNKIFT---MKSQKLISKIHVQVSPAQVHIIQKYMSIFLQNGF 1121 Query: 486 KA-------------------ERFGPNA-------IAIREIPAILSKKNIPQLLRDIIDE 519 + E + + +P K ++ Sbjct: 1122 EVQILEEPIHKRRKTNNNNINEPIDDEEEMLMELNVYLLSLPVFNGKILEVVDFMSLLHH 1181 Query: 520 IIDSSTTY--------------------------TLQDRIENILATMACYGSIRSGRKMQ 553 + + ++ ILA+ AC +I G+ + Sbjct: 1182 LTEHPVASYNESEVSVKTTIDLNNKTDTWFNYNFPRPQKVWRILASKACRNAIMVGKALN 1241 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTF-IKLKLSDIEKLFG 593 EM ++ +++ N C HGRPT + DI+ F Sbjct: 1242 IYEMIKIKKKLSFLKNPWNCPHGRPTIKYLINNVDIKNCFK 1282 >gi|167387678|ref|XP_001738256.1| DNA mismatch repair protein mlh1 [Entamoeba dispar SAW760] gi|165898545|gb|EDR25378.1| DNA mismatch repair protein mlh1, putative [Entamoeba dispar SAW760] Length = 684 Score = 235 bits (599), Expect = 2e-59, Method: Composition-based stats. Identities = 101/355 (28%), Positives = 176/355 (49%), Gaps = 17/355 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI++L + IN+I AGE+I+RP +KELIENS+DA S V I GG +TD+G Sbjct: 1 MKIKRLDQTTINKIGAGEVIQRPFNVVKELIENSIDAHCSSVIISIGKGGLESIVVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSK-ISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + R+ TSK I D T+G+RGEAL + VS +T++SR + G Sbjct: 61 CGISLEDLKVLGGRYTTSKSIEGD-----TYGYRGEALSCMTYVSKVTIISRTATSEIGY 115 Query: 120 QIAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ + I + P+A + GT V V +LF + + + ++ E I +IR AI Sbjct: 116 KVVFQNGQIIENPIPLACSVGTTVIVDNLFDKMLRKKSMKET--EEYKKIISIIRDYAIH 173 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS--NEITLQGY 236 ++FT ++ ++ + N + I+++ + NN + + + + Y Sbjct: 174 KATIAFTLRKAGTSVCEIKTE-KNSTVLKNITKIFTTNISNNLQQYSYQCLEPPFQMICY 232 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 TF +G N+ F+N R V+ + I Y E +P Y V L + ++ ++D Sbjct: 233 LSNSTF-QGKKNKMIFFVNDRYVEHIGLKKVIERIYDEYLPKVNY-FVYLSINVNKERID 290 Query: 297 VNVHPAKSYIRFRNPTIIRNFI---IQSIQKAINKKGISTSSVLSKKMISSFHQD 348 NV+P+K+ +R + N I + SI ++ S + + I + Q+ Sbjct: 291 CNVNPSKTAVRLLEEEKLINQIDKFLNSIIIEFSQTRSFPPSQIKTQPIPNIQQE 345 >gi|67540292|ref|XP_663920.1| hypothetical protein AN6316.2 [Aspergillus nidulans FGSC A4] gi|40739510|gb|EAA58700.1| hypothetical protein AN6316.2 [Aspergillus nidulans FGSC A4] gi|259479468|tpe|CBF69717.1| TPA: ATP-binding protein (Eurofung) [Aspergillus nidulans FGSC A4] Length = 1228 Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 93/408 (22%), Positives = 156/408 (38%), Gaps = 25/408 (6%) Query: 16 AGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +G++I + IKEL+ENSLDA ++ +E G ++ DNG G+ E +H Sbjct: 12 SGQVIVDLTSVIKELVENSLDAGATSIEVRFRNSGLDLIEVQDNGSGIAPENYENVALKH 71 Query: 76 CTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTGAQIAISGE-KISSV 131 TSK+S DD ++ TFGFRGEAL S+ A+S + + ++ K+ Sbjct: 72 YTSKLSSYDDLLHLQTFGFRGEALSSLCALSDFRITTAQANQAPRATRLEFEQSGKLRKT 131 Query: 132 RPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 VA GT+ V LF +P R K+ + E + +++ A V FT + Sbjct: 132 EVVAGQKGTVASVESLFRKLPVRRRELEKNIKREYGKVLNLLHAYACISTGVRFTIKNTQ 191 Query: 191 -SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE----------------ITL 233 + + N E I+ V G + + L+ + I + Sbjct: 192 AKKTVVVFATNGNPTTKENIANVYGAKTLLALIPLDLELQFEPSVAETMMAGDKKSNIQV 251 Query: 234 QGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 +G+ P F R ++ +F+N R I I Y L + P V +D Sbjct: 252 RGHISRPVFGEGRQTPDRQMLFVNSRPCALPQITKAINEVYKSF-NLAQSPFVFADFHMD 310 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 DVNV P K I + + + QS+QK + + Q + P Sbjct: 311 TNAYDVNVSPDKRTILLHDAGALIESLKQSLQKLFESADQTVPQSQILGKLPLARQRSLP 370 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 +T A + ++ + D + + P +E+ Sbjct: 371 ETTRSDRAMEQEASDRDEREGGSQPNPQDRMKGLLGNIRTRDTPPDET 418 Score = 133 bits (335), Expect = 7e-29, Method: Composition-based stats. Identities = 60/332 (18%), Positives = 117/332 (35%), Gaps = 39/332 (11%) Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 E P + D+N K +I + +I++ V + S+ Sbjct: 636 HTQTEPQPAKEDMNAEEKKRREDAEVQRLIEEAGKANQANSISRANKLHKGVSYRD--ST 693 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 H A L + + + + S ++L S + + + Sbjct: 694 VHLATAINASLSRIESQAKYIHDSHSRRNLSSSEDELDESRLSQVAPEERLTLTVNKDDF 753 Query: 405 QLGIACAQIHQNYIISQ------------------TTDGLVIVDQHAAHERLIFEKMRQD 446 Q + +I++ D L I+DQHA+ E++ FE+++ Sbjct: 754 ARMRIHGQFNLGFILASRTTSTSHRAESDPASGLGFKDELFIIDQHASDEKINFERLQST 813 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE-------RFGPNAIAIRE 499 + +Q L+ P+ +DL E +++E+ L + G + G + Sbjct: 814 TT---VQNQRLVHPKRLDLTAVEEEIVIENQVILEKNGFVVDVDDSGDKPIGQRCSLL-S 869 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYT--------LQDRIENILATMACYGSIRSGRK 551 +P + L ++I + ++ST T ++ + A AC SI G+ Sbjct: 870 LPLSKEVVFDVRDLEELIAILTETSTPNTTGPEIDIPRPSKVRKMFAMRACRSSIMIGKT 929 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + +M R++R+M C HGRPT L Sbjct: 930 LTQRQMERVVRDMGTIDKPWNCPHGRPTMRHL 961 >gi|225848263|ref|YP_002728426.1| DNA mismatch repair protein MutL [Sulfurihydrogenibium azorense Az-Fu1] gi|225643743|gb|ACN98793.1| DNA mismatch repair protein MutL [Sulfurihydrogenibium azorense Az-Fu1] Length = 157 Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 75/154 (48%), Positives = 103/154 (66%), Gaps = 2/154 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKIR L ++++N+IAAGE++ERPS +KELIENSLD +S +E I GK + DNG Sbjct: 1 MKIRPLPDEVVNKIAAGEVVERPSSVLKELIENSLDTSASLIEVSIEKAGKRLISVFDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ AV+RH TSKI +D +I T+GFRGEAL SI +VS LT+ SR + G Sbjct: 61 EGIEKQDLINAVKRHYTSKIKALEDLYSIITYGFRGEALSSISSVSRLTITSRTKNDLHG 120 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIP 152 +Q+++ G KI S V GT VEV+DLFF + Sbjct: 121 SQLSLEGGKILSFSEVGCPVGTKVEVKDLFFNVE 154 >gi|213019734|ref|ZP_03335539.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994775|gb|EEB55418.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 173 Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 80/168 (47%), Positives = 106/168 (63%), Gaps = 2/168 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L K IN+IAAGE+IERP+ +KEL+EN++DA SS +E I GG++ +TDNG Sbjct: 1 MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSSEIEIKIESGGRNLITVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ +A RH TSK+SD + I GFRGEALPSI AVS + L S+ Sbjct: 61 NGIEKEDLELAFMRHATSKLSDGELIEIRHLGFRGEALPSIAAVSRMKLSSKASGAKEAW 120 Query: 120 QIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETN 166 I GEK+ + P ++ GT +EVRDLFF P RL FLK+E+ E Sbjct: 121 SIRYEGGEKVREITPCSLLQGTYIEVRDLFFATPNRLKFLKTERAEHK 168 >gi|118151052|ref|NP_001071449.1| PMS1 protein homolog 1 [Bos taurus] gi|117306701|gb|AAI26840.1| PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Bos taurus] Length = 932 Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 104/452 (23%), Positives = 187/452 (41%), Gaps = 34/452 (7%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++LS + +++ ++I +KELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLSAATVRLLSSSQVITSVVSVVKELIENSLDARATSIDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ +++ ++ +N Q Sbjct: 62 KAIDAPVMAVKYYTSKISSHEDLENLTTYGFRGEALGSICCIAEVSITTKTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + G I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGGGHIISQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLISYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P V F K+ ++ ++ + + V+G + N + + + ++I L G Sbjct: 182 LKPDVRIVFIHNKAIIWQ---KTRVSDHKMALMSVLGTAVMGNMESFQYHCEESQIFLSG 238 Query: 236 YTGIP-----TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YP+ L Sbjct: 239 FLPKHDADHSCTSLSTPERSFIFINSRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH- 346 +++ VDVN+ P KS + +N + + + + S +K +SS Sbjct: 299 IDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTRYGSLPSTNSYESNKTDVSSADM 358 Query: 347 -------------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 + + P TS Q + + +TN L + Sbjct: 359 VVSKTTETDVLLTKMETSGNNYPNVDTSAIPFQNDVRNDTSGENTNYCLNHQVHIGDHYD 418 Query: 394 DPV-EESEATHYQLGIACAQIHQNYIISQTTD 424 D E+ + G A +I +N + T Sbjct: 419 DYFNSENSSIDKNDGNAFKEIPENKSSCEDTQ 450 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 101/302 (33%), Gaps = 31/302 (10%) Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 R I+ I Q Q ++ + H+ ++ PK EK Sbjct: 630 RYNKQIKRAIEQESQVSLKDGKKRMKPTSVWNLAQK-HKLKTSPSNQPKLDELFQAQIEK 688 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 Q ++ + + + E + L + + + +++ Sbjct: 689 KKNQNIKIVQIPFSMENLKKNFDTQKKFDLEEKDEFCLIHNLK--FPDAWLITSKTEIML 746 Query: 429 VDQHAAHERLIFEKMRQDFN--STKITSQTLLTPEIIDLLEGECALIMEHDED------- 479 ++ + E L+F+++ ++ + + +LT + + L +D Sbjct: 747 LNSYRVEEALLFKRLLENHKLPAEPLEKPIILTESLFNGSHYLEILHKMTADDQRYSGSI 806 Query: 480 ------LHRLGIKAE-----RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 L G K + N++ I + L + L ++I++ I++ + Sbjct: 807 YLSDPRLTANGFKIKLIPGVSISENSLEIEGMANCLPFYGVMDL-KEILNAILNKNAKEV 865 Query: 529 LQDRIENILATM---ACYGSIRSGRKMQSIEMNRLLREM---EKNPNSSQCNHGRPTFIK 582 + R +++ + A S + + +M ++ M +N +QC HGRP F Sbjct: 866 YECRPRKVISYLEGEAVRLSRQLPMYLSKEDMQDIIYRMKHQFRNE-ITQCVHGRPFFHH 924 Query: 583 LK 584 L Sbjct: 925 LT 926 >gi|225349704|gb|ACN87777.1| MutL [Lactobacillus casei] gi|225349706|gb|ACN87778.1| MutL [Lactobacillus casei] gi|225349708|gb|ACN87779.1| MutL [Lactobacillus casei] gi|225349714|gb|ACN87782.1| MutL [Lactobacillus casei] gi|225349716|gb|ACN87783.1| MutL [Lactobacillus casei] gi|225349718|gb|ACN87784.1| MutL [Lactobacillus casei] gi|225349720|gb|ACN87785.1| MutL [Lactobacillus casei] Length = 237 Score = 234 bits (598), Expect = 3e-59, Method: Composition-based stats. Identities = 77/240 (32%), Positives = 135/240 (56%), Gaps = 6/240 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI--SDDFSN 86 EL+ENS+DA++++++ +I+ G +++DNG G+ +++ A RH TSKI + D N Sbjct: 1 ELVENSIDAQATQIDVLISAAGLQEIRVSDNGIGIAPDDVATAFLRHATSKILTTRDLFN 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRD 146 +H+ GFRGEAL SI AV+ + L + + G QI + G ++ + A GT VEV D Sbjct: 61 VHSLGFRGEALASIAAVADVKLTTAT-DSGIGTQIHVKGGEVEAQSTAAHRRGTDVEVND 119 Query: 147 LFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP 206 LFF PARL ++KS+Q E I D++ R+A+A P ++FT S + + + G+ Sbjct: 120 LFFNTPARLKYMKSQQTELGKIVDIVSRLAMANPDIAFTVSHDGNMVVR---TAGQGDLR 176 Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 + ++ + G + V+ + + + G T +P R + N + +NGR +++ + Sbjct: 177 QTLAGIYGLSVARSMVDFKAQDLDFRVSGLTSLPETTRASRNYLSLVVNGRYIKNFQLTK 236 >gi|311272789|ref|XP_003133587.1| PREDICTED: LOW QUALITY PROTEIN: PMS1 protein homolog 1-like [Sus scrofa] Length = 923 Score = 234 bits (598), Expect = 3e-59, Method: Composition-based stats. Identities = 89/357 (24%), Positives = 159/357 (44%), Gaps = 19/357 (5%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R +N Q Sbjct: 62 KAVDAPVMAVKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTASDNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E + D++ + Sbjct: 122 VLDGSGHIISQKPSHLGQGTTVTALKLFKNLPVRKQFYSTAKKCKDEIKKVQDLLISYGV 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P+V F K+ ++ ++ + + V+G + N + + + ++I L G Sbjct: 182 LKPEVRLVFIHNKAIIWQ---KTRVSDHKMALMSVLGTAVMGNMEAFQYHSEESQIYLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YP+ L Sbjct: 239 FLPKHNADHSVTSLSTPERSFIFINSRPVHQKDILKLIRHYYNLKCLKETTRLYPIFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 +++ VDVN+ P KS + +N + + + + S K +SS Sbjct: 299 IDVPTVDVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGSLPSTNSYESDKTDVSS 355 >gi|296490755|gb|DAA32868.1| postmeiotic segregation 1 [Bos taurus] Length = 932 Score = 234 bits (597), Expect = 3e-59, Method: Composition-based stats. Identities = 104/452 (23%), Positives = 187/452 (41%), Gaps = 34/452 (7%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++LS + +++ ++I +KELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLSAATVRLLSSSQVITSVVSVVKELIENSLDARATSIDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ +++ ++ +N Q Sbjct: 62 KAIDAPVMAVKYYTSKISSHEDLENLTTYGFRGEALGSICCIAEVSITTKTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + G I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGGGHIISQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLISYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P V F K+ ++ ++ + + V+G + N + + + ++I L G Sbjct: 182 LKPDVRIVFIHNKAIIWQ---KTRVSDHKMALMSVLGTTVMGNMESFQYHCEESQIFLSG 238 Query: 236 YTGIP-----TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R V K IL IR Y YP+ L Sbjct: 239 FLPKHDADHSCTSLSTPERSFIFINSRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH- 346 +++ VDVN+ P KS + +N + + + + S +K +SS Sbjct: 299 IDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTRYGSLPSTNSYESNKTDVSSADM 358 Query: 347 -------------QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 + + P TS Q + + +TN L + Sbjct: 359 VVSKTTETDVLLTKMETSGNNYPNVDTSAIPFQNDVRNDTSGENTNYCLNHQVHIGDHYD 418 Query: 394 DPV-EESEATHYQLGIACAQIHQNYIISQTTD 424 D E+ + G A +I +N + T Sbjct: 419 DYFNSENSSIDKNDGNAFKEIPENKSSCEDTQ 450 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 101/302 (33%), Gaps = 31/302 (10%) Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 R I+ I Q Q ++ + H+ ++ PK EK Sbjct: 630 RYNKQIKRAIEQESQVSLKDGKKRMKPTSVWNLAQK-HKLKTSPSNQPKLDELFQAQIEK 688 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 Q ++ + + + E + L + + + +++ Sbjct: 689 KKNQNIKIVQIPFSMENLKKNFDTQKKFDLEEKDEFCLIHNLK--FPDAWLITSKTEIML 746 Query: 429 VDQHAAHERLIFEKMRQDFN--STKITSQTLLTPEIIDLLEGECALIMEHDED------- 479 ++ + E L+F+++ ++ + + +LT + + L +D Sbjct: 747 LNSYRVEEALLFKRLLENHKLPAEPLEKPIILTESLFNGSHYLEILHKMTADDQRYSGSI 806 Query: 480 ------LHRLGIKAE-----RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 L G K + N++ I + L + L ++I++ I++ + Sbjct: 807 YLSDPRLTANGFKIKLIPGVSISENSLEIEGMANCLPFYGVMDL-KEILNAILNKNAKEV 865 Query: 529 LQDRIENILATM---ACYGSIRSGRKMQSIEMNRLLREM---EKNPNSSQCNHGRPTFIK 582 + R +++ + A S + + +M ++ M +N +QC HGRP F Sbjct: 866 YECRPRKVISYLEGEAVRLSRQLPMYLSKEDMQDIIYRMKHQFRNE-ITQCVHGRPFFHH 924 Query: 583 LK 584 L Sbjct: 925 LT 926 >gi|225349724|gb|ACN87787.1| MutL [Lactobacillus casei] Length = 237 Score = 234 bits (597), Expect = 3e-59, Method: Composition-based stats. Identities = 77/240 (32%), Positives = 136/240 (56%), Gaps = 6/240 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI--SDDFSN 86 EL+ENS+DA++++++ +I+ G +++DNG G+ +++ A RH TSKI + D N Sbjct: 1 ELVENSIDAQATQIDVLISAAGLQEIRVSDNGIGIAPDDVATAFLRHATSKILTTRDLFN 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRD 146 +H+ GFRGEAL SI AV+ + L + + G QI + G ++ + A GT VEV D Sbjct: 61 VHSLGFRGEALASIAAVADVKLTTAT-DSGIGTQIHVKGGEVEAQSTAAHRRGTDVEVND 119 Query: 147 LFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP 206 LFF PARL ++KS+Q E I D++ R+A+A P ++FT S + + + G+ Sbjct: 120 LFFNTPARLKYMKSQQTELGKIVDIVSRLAMANPDIAFTVSHDGNMVVR---TAGQGDLR 176 Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 + ++ + G + V++ + + + G T +P R + N + +NGR +++ + Sbjct: 177 QTLAGIYGLSVARSMVDVKAQDLDFRVSGLTSLPETTRASRNYLSLVVNGRYIKNFQLTK 236 >gi|156538821|ref|XP_001607972.1| PREDICTED: similar to SI:dZ72B14.2 (novel protein similar to human postmeiotic segregation increased 1-like protein (PMSL1)) [Nasonia vitripennis] Length = 1054 Score = 234 bits (597), Expect = 3e-59, Method: Composition-based stats. Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 17/332 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS++ + I +G++I AIKEL+ENSLDA++ +E + G S ++ DNG Sbjct: 203 MSIKPLSKETVKLINSGQVISSIYSAIKELVENSLDAQAQNIEVNLVDDGLSLIEVKDNG 262 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ ++ TSKISD D + T+GFRGE L S+ V+ +T+ ++ ++ T Sbjct: 263 CGISRDDAQYMALHAHTSKISDFNDLDLLSTYGFRGEGLTSVCQVADVTISTKTEEDVTM 322 Query: 119 AQIA-ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLN---FLKSEQVETNLITDVIRR 174 + ++ GT V++R+LF +P R N K E I +++ Sbjct: 323 LRYTLNHDGQVVDSELSHGLTGTTVQMRNLFKNMPVRRNILTNKKRMNQELKAIELLLKM 382 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 +I P V F + + + E + V G + + + +Q Sbjct: 383 FSICKPSVRFMLRVNGKTVFT---KISCKTVMEAVRSVYGSQIFPKLTHITKSFGQTEMQ 439 Query: 235 GYTG----IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG----RYPVVVL 286 + +V +NGR ++ K I I +E R V L Sbjct: 440 LFIPDKNVKDASEVSQVGLQFVCVNGRPIKSKEIEKKINKRISEYFNQNTSSSRKFVFCL 499 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI 318 +L++DP +DVN+ P K I +N T + + I Sbjct: 500 ILKVDPSMLDVNLEPNKDKIYLQNETAVLSEI 531 >gi|67471818|ref|XP_651821.1| DNA mismatch repair protein MLH1 [Entamoeba histolytica HM-1:IMSS] gi|56468601|gb|EAL46434.1| DNA mismatch repair protein MLH1, putative [Entamoeba histolytica HM-1:IMSS] Length = 702 Score = 234 bits (596), Expect = 4e-59, Method: Composition-based stats. Identities = 96/355 (27%), Positives = 173/355 (48%), Gaps = 17/355 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 MKI++L + IN+I AGE+I+RP +KELIENS+DA S + I GG +TD+G Sbjct: 1 MKIKRLDQTTINKIGAGEVIQRPFNVVKELIENSIDAHCSSIIISIGKGGLESIVVTDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSK-ISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ E++ + R+ TSK I D T+G+RGEAL + V +T++SR + G Sbjct: 61 CGISLEDLKVLGGRYTTSKSIEGD-----TYGYRGEALSCMTYVGKVTIISRTATSEIGY 115 Query: 120 QIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ +I + P+A + GT V V +LF + + + ++ E I +I AI Sbjct: 116 KVVFQNGQITENPIPLACSIGTTVIVNNLFDKMLRKKSMKET--EEYKKIISIIGDYAIH 173 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS--NEITLQGY 236 ++FT ++ ++ + + + IS++ + NN + + + + Y Sbjct: 174 KATIAFTLRKAGTSVCEIKTE-KHSTILKNISKIFTTNISNNLQQYSYQCLEPPFQMICY 232 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 F +G N+ F+N R ++ + I Y E +P Y V L + ++ ++D Sbjct: 233 LSNSIF-QGKKNKMIFFVNDRFIEHIGLKKVIERIYDEYLPKVNY-FVYLSINVNKERID 290 Query: 297 VNVHPAKSYIRFRNPTIIRNFI---IQSIQKAINKKGISTSSVLSKKMISSFHQD 348 NV+P+K+ IR + N I + SI ++ S + + + + Q+ Sbjct: 291 CNVNPSKTAIRLLEEEKLINQIDKFLNSIIIEFSQTRSFPPSQIKTQPMPNIQQE 345 >gi|260948620|ref|XP_002618607.1| hypothetical protein CLUG_02066 [Clavispora lusitaniae ATCC 42720] gi|238848479|gb|EEQ37943.1| hypothetical protein CLUG_02066 [Clavispora lusitaniae ATCC 42720] Length = 610 Score = 234 bits (596), Expect = 4e-59, Method: Composition-based stats. Identities = 112/613 (18%), Positives = 218/613 (35%), Gaps = 71/613 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IRKL K + + +++ +++L++NSLDA++S V I S + DNG Sbjct: 27 MPIRKLRGKTRQTLRSQVVVDSVETVLRQLVQNSLDAQASFVRVKIDLASLSVC-VEDNG 85 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGA 119 G+ + ++ + +R+ TS G RGE+L SI S + + S+ Sbjct: 86 HGIEASDLSLVGKRYHTSS-----------GGRGESLSSIAVCSGSVIVRSKTQAQQENC 134 Query: 120 QIAISGE--------KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 GT V V +F ++P RL + + + Sbjct: 135 VCLGGSCPPELLRVLTSFFQLDSLEAAGTQVMVSRVFASMPVRLENARRKADKLRQKMKS 194 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI 231 + + P V ++ + F + + N V L KS Sbjct: 195 VFFELLCAPHVKAEVYLLEQGEFVRMFSVEACDSVVEKFSSLFRLSAKNMVSLLAKSTSC 254 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 +++G + + +VF+NG V + ++ I ++ + GR V L + Sbjct: 255 SVEG--SFCLQSSHRSGLQFVFLNGEHVPLQSQVNRIFASHGYGL--GRQSVFGRSLRLH 310 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 P ++ ++ F+ + + K + K + + Q +P Sbjct: 311 PVYCFH--------VQAQDEANALRFLKEELAKVLAKV-----LAQGGQKRYNEGQRGSP 357 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 K + +TQE + PS D + + P+ Sbjct: 358 KRIRKSTREEIDSTQE------------ETQPSVDFSQPSVDFPLVHVSQQDIGTLKVVK 405 Query: 412 QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT-----SQTLLTPEIIDLL 466 Q+ + +I++++ L I+DQHA ER+ E+ +++ + L Sbjct: 406 QVSKQFILAKSGSSLFILDQHACDERVQVEQFFREYITAMSDPSCDLRIRCDETMAFSLA 465 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILS-KKNIPQLLRDIIDEIIDSST 525 + E + +++ GI G + +P LS + +L ++ I++ Sbjct: 466 KEEQTSFLRYEDVFRNFGISY-VLGNRKCTVTHLPRALSHETQPERLKLLLLQHIMEMEE 524 Query: 526 TYT--------------LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 + I L + AC S++ G + EM L+ +++K Sbjct: 525 GEKQATMTGNWVQDVSNIPSAISESLISSACRQSVKFGDLLSKAEMEYLISQLDKCTLPF 584 Query: 572 QCNHGRPTFIKLK 584 QC HGRPT + L+ Sbjct: 585 QCAHGRPTIVPLE 597 >gi|242008846|ref|XP_002425208.1| DNA mismatch repair protein pms2, putative [Pediculus humanus corporis] gi|212508929|gb|EEB12470.1| DNA mismatch repair protein pms2, putative [Pediculus humanus corporis] Length = 712 Score = 234 bits (596), Expect = 4e-59, Method: Composition-based stats. Identities = 106/530 (20%), Positives = 209/530 (39%), Gaps = 55/530 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR + + INQI +G+++ + A+KEL+ENSLDA ++ ++ + G ++ DNG G Sbjct: 5 IRPIDKTTINQICSGQVVLTLATAVKELLENSLDAGATSIQIKLEEYGSKVIEVIDNGCG 64 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + + +H TSKIS+ D N+ TFGFRGEAL S+ +S +T+ ++ GA Sbjct: 65 VNEDNFQALTLKHHTSKISEFSDIYNVKTFGFRGEALSSLCTLSSVTITTQHINAQIGAV 124 Query: 121 IAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAIA 178 + I S + GT V + +LF T+P R K+ + E + + V+ + Sbjct: 125 LKFDHNGIIKSNTKIHRKVGTTVRLENLFCTLPIRRTEFLKNLKKEFSKMCTVLYAYGLI 184 Query: 179 YPKVSFTFST-----------IKSNRYKMNFQSTNGN-----FPERISQVIGEDFINNAV 222 V T + + K NF +T + I+ + G N + Sbjct: 185 STGVRITCTNHVVTKSKFQNKNDQDNLKKNFTTTIMDIEGKSIEFNINSIFGIKEKQNLL 244 Query: 223 ELNEKSNE------------------ITLQGYTGIPTFNRGN--ANQFYVFINGRTVQDK 262 + +K+ ++GY + G +N+ + +IN R + Sbjct: 245 KFVQKNPSLETLKEFNIESKKFNSELYKIEGYISSCSHGCGKSGSNRQFYYINQRPIDHP 304 Query: 263 FILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSI 322 I + Y + P V+L ++++ D+N+ P K + +N F++ ++ Sbjct: 305 KIFKLVNETYHQFNS-HEDPFVILHIKVEDGLFDINLVPDKRQVLVQNEN----FLLATL 359 Query: 323 QKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA-TSLTNTQEKLFLQENRLSTNDL 381 ++++ S L I + K T L N +EK L+++ +L Sbjct: 360 KESLLDMFKLIPSTLKVNNIGLLNIKFENDKSSDKVNCTQLENEKEKFNLKKSEDLKMNL 419 Query: 382 LPSD-------DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAA 434 + S ++ + ++ ++ + ++ + D LV Sbjct: 420 KRFQYSSQNLNNTNNSNMSESIPSNKISNNFISNTSCSSKDMFVQKKLKDFLVSDSADND 479 Query: 435 HE-RLIFEKMRQDFNSTKITSQTLLTPEIIDLL-EGECALIMEHDEDLHR 482 + + E ++ + + S+ LL P + ++ L Sbjct: 480 QQLNDVTENLKTEMTKSPPKSKQLLFPTQNFSNYKITIENSNDNKRKLEE 529 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 63/154 (40%), Gaps = 13/154 (8%) Query: 365 TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 +++ EN + S+ + ++ +EE E + L I + + Sbjct: 545 EPKRIKYDENITGHVAEIKSETLEFENISNNLEEQEEKNGGLDINTEKYDEGLDNKFRRS 604 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 + I+DQHA+ E+ FE ++ T + Q ++ PE ++L + L++EH+E + G Sbjct: 605 DIFIIDQHASDEKYNFEMLKL---KTVMQCQKMVNPETLNLTVDKEELMLEHEEIFKKNG 661 Query: 485 IKAERFGPNA-----IAIREIPA----ILSKKNI 509 F I + +P + K ++ Sbjct: 662 FHF-IFDETQVPTKRIKLTSVPMSKSIVFGKNDV 694 >gi|207341702|gb|EDZ69686.1| YNL082Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 417 Score = 233 bits (595), Expect = 5e-59, Method: Composition-based stats. Identities = 92/422 (21%), Positives = 173/422 (40%), Gaps = 39/422 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I ++++ +++I +G++I + A+KEL++NS+DA ++++E + G + +DN Sbjct: 1 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +H TSKI+ D + + T GFRGEAL S+ ++ L++++ Sbjct: 61 GDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKA 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMA 176 I+S + N GT V V LF +P R F K+ + + VI+ A Sbjct: 121 DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYA 180 Query: 177 IAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIG----------------EDFI 218 I + F+ I K + + N + + IS V G F Sbjct: 181 IINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFK 240 Query: 219 NNAVELNEK-------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIR 269 N + +I ++GY +F + ++ ++++N R V+ +L Sbjct: 241 NRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCN 300 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + ++P V L LE+ +DVNV P K I N + + + ++ Sbjct: 301 EVYKTFNNV-QFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDI----FKTTLSDY 355 Query: 330 GISTSSVLSKKMISSFHQDNAPK---THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDD 386 L K+M S Q + +T+ + E + + ++ + Sbjct: 356 YNRQELALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHTARSESNQSNHAHFNS 415 Query: 387 PT 388 T Sbjct: 416 TT 417 >gi|296412633|ref|XP_002836027.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629827|emb|CAZ80184.1| unnamed protein product [Tuber melanosporum] Length = 1023 Score = 233 bits (595), Expect = 6e-59, Method: Composition-based stats. Identities = 93/408 (22%), Positives = 170/408 (41%), Gaps = 29/408 (7%) Query: 2 KIRKLSEKIINQIAAGEII-ERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 IR + + ++QI +G++I E + +KEL+EN LDA ++ +E G ++ DNG Sbjct: 3 TIRPIEGRSVHQIQSGQVISEGLTSVVKELVENGLDAHATSIEVRFKSNGLDAIEVIDNG 62 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPP-QNNT 117 G++ E +H TSK++ D ++ TFGFRGEAL S+ A+S L +++ + Sbjct: 63 DGISPENYESIALKHWTSKLTSYADLDSVTTFGFRGEALSSLCALSDLQIVTATASEAPK 122 Query: 118 GAQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRM 175 G ++ K+ S A GT V V ++F T+P R ++ + E + +++ Sbjct: 123 GTKLEFEMSGKLKSRSVTAAQKGTAVLVENIFKTLPVRRKELERNIKREYTKVLGILQAY 182 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKS----- 228 A V F+ + + +T GN E +S V G ++ V +N + Sbjct: 183 AGVCVGVKFSVFNQPAKGRRTPVFATKGNPTVRENVSNVFGAKALSALVPMNLEFEMKPT 242 Query: 229 ------------NEITLQGYTGIPTFNRGN--ANQFYVFINGRTVQDKFILSTIRTAYAE 274 I + G+ P G ++ F+NGR + I Y Sbjct: 243 RKGFQKAAKPSEKMIKIVGFISRPVVGEGRLAPDRQMFFVNGRPCMLPQVARAINEVYKH 302 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 + + P + +++D DVNV P K I + + + S+ + + Sbjct: 303 F-NVTQSPFIFADIQLDTNAYDVNVSPDKRTILLHDQAEMMESLKVSLTDLFDNHEQTVP 361 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLL 382 + +++ + Q KT K A ++ E +E+ S Sbjct: 362 NSVTQSKTQNLKQMTLDKTPA-KPAQAMQQVMEDDSAEEDDASYYAPP 408 Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 10/190 (5%) Query: 401 ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 + Q ++ +I++ D L I+DQHA+ E+ FEK++Q + +Q L P Sbjct: 800 KQDFFEMQIKGQFNKGFILATRADDLFIIDQHASDEKYNFEKLQQVTI---VQNQRLAVP 856 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAE-----RFGPNAIAIREIPAILSKKNIPQLLRD 515 + +DL+ + ++++H + + G E G I +P L + Sbjct: 857 KKLDLMAVDEIVVIDHIDTFKKNGFVIEVDTGAPVGEKCKLI-SLPISKETVFGLDDLEE 915 Query: 516 IIDEIIDS-STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 +I I + + ++ + A AC S+ G+ + M +L++ M + C Sbjct: 916 LIHLISEDPGNSAVRCSKVRKMFAMRACRKSVMVGKALTEKGMEKLVKHMGELDKPWNCP 975 Query: 575 HGRPTFIKLK 584 HGRPT L Sbjct: 976 HGRPTMRHLS 985 >gi|225349710|gb|ACN87780.1| MutL [Lactobacillus casei] gi|225349712|gb|ACN87781.1| MutL [Lactobacillus casei] Length = 237 Score = 233 bits (594), Expect = 6e-59, Method: Composition-based stats. Identities = 77/240 (32%), Positives = 135/240 (56%), Gaps = 6/240 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI--SDDFSN 86 EL+ENS+DA++++++ +I+ G +++DNG G+ +++ A RH TSKI + D N Sbjct: 1 ELVENSIDAQATQIDVLISAAGLQEIRVSDNGIGIAPDDVATAFLRHATSKILTTRDLFN 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRD 146 +H+ GFRGEAL SI AV+ + L + + G QI + G ++ + A GT VEV D Sbjct: 61 VHSLGFRGEALASIAAVADVKLTTAT-DSGIGTQIHVKGGEVEAQSTAAHRRGTDVEVND 119 Query: 147 LFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP 206 LFF PARL ++KS+Q E I D++ R+A+A P ++FT S + + + G+ Sbjct: 120 LFFNTPARLKYMKSQQTELGKIVDIVSRLAMANPDIAFTVSHDGNMVVR---TAGQGDLR 176 Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 + ++ + G + V+ + + + G T +P R + N + +NGR +++ + Sbjct: 177 QTLAGIYGLSVARSMVDFKAQDLDFRVSGLTSLPETTRASHNYLSLVVNGRYIKNFQLTK 236 >gi|225349722|gb|ACN87786.1| MutL [Lactobacillus casei] Length = 237 Score = 233 bits (594), Expect = 6e-59, Method: Composition-based stats. Identities = 77/240 (32%), Positives = 135/240 (56%), Gaps = 6/240 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI--SDDFSN 86 EL+ENS+DA++++++ +I+ G +++DNG G+ +++ A RH TSKI + D N Sbjct: 1 ELVENSIDAQATQIDVLISAAGLQEIRVSDNGIGIAPDDVATAFLRHATSKILTTRDLFN 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRD 146 +H+ GFRGEAL SI AV+ + L + + G QI + G ++ + A GT VEV D Sbjct: 61 VHSLGFRGEALASIAAVADVKLTTAT-DSGIGTQIHVKGGEVEAQSTAAHRRGTDVEVND 119 Query: 147 LFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP 206 LFF PARL ++KS+Q E I D++ R+A+A P ++FT S + + + G+ Sbjct: 120 LFFNTPARLKYMKSQQTELGKIVDIVSRLAMANPDIAFTVSHDGNMVVR---TAGQGDLR 176 Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 + ++ + G + V+ + + + G T +P R + N + +NGR +++ + Sbjct: 177 QTLAGIYGLSVARSMVDFKAQDLDFRVSGLTSLPDTTRASRNYSSLVVNGRYIKNFQLTK 236 >gi|158286232|ref|XP_308635.4| AGAP007126-PA [Anopheles gambiae str. PEST] gi|157020370|gb|EAA04111.4| AGAP007126-PA [Anopheles gambiae str. PEST] Length = 882 Score = 233 bits (594), Expect = 7e-59, Method: Composition-based stats. Identities = 89/364 (24%), Positives = 161/364 (44%), Gaps = 39/364 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI + ++ +++I +G+++ +IA+KEL+ENSLDA ++ +E + G G +++DNG Sbjct: 19 KINAIDKETVHRICSGQVVLNLAIAVKELVENSLDAGATLIEVKLRGCGAELVEVSDNGS 78 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSK+ + D +I TFGFRGEAL S+ A+S + + +R Sbjct: 79 GVEEKNFAGLTAKYHTSKLKEFTDLESIETFGFRGEALSSLCALSDMIITTRHSTAPHAT 138 Query: 120 QIA-ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARL-NFLKSEQVETNLITDVIRRMAI 177 ++ +I + P A GT V + +LF T+P R F ++ + E + +++ + Sbjct: 139 KLTLNHEGRIQTRAPCAHPVGTTVSLTNLFATLPVRKKEFQRNIKREFQRMCQILQAYCL 198 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFP--ERISQVIGEDFINNAVELNEKS------- 228 V + + K ST G+ + ++ + G ++L Sbjct: 199 VSVGVRIICTNHTAKGGKSVIMSTQGSSRVLDNVTALFGTKQTAELMQLVPCIGGNGKIQ 258 Query: 229 -----------------------NEITLQGYTGIPTFN--RGNANQFYVFINGRTVQDKF 263 + ++GY R ++ + FIN R + K Sbjct: 259 DLEASDFDDSMALTQEEVDNFNLSRYKIEGYISSCAHGSGRSTKDRQFYFINSRPCEPKQ 318 Query: 264 ILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ 323 I I AY + + P V L L +D +VDVN+ P K + N I+ I +SI+ Sbjct: 319 ISKLINDAYHRY-NVHQQPFVFLNLMLDRSEVDVNLTPDKRQVLVNNEKILMLAIRKSIK 377 Query: 324 KAIN 327 K Sbjct: 378 KTFQ 381 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 62/304 (20%), Positives = 118/304 (38%), Gaps = 21/304 (6%) Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 + K+ + + + K S S+L +S H + Sbjct: 555 DEDSMKANAGTSSQESVTELVSFLSCKTETSDSSSPQSILLDDELSDEEGQADDMRHRNQ 614 Query: 358 YATSLT-NTQEKLFLQENRLSTNDLLPSDDPTY-------------SEDNDPVEESEATH 403 S++ + E+L +E L + + T + +N+ E Sbjct: 615 QQLSVSWDLLEQLIKREQTLQSARTADQNSLTRLRFKSKINPTSNKAAENELQTEITKDD 674 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 + Q + +II + D L IVDQHA E+ FE +++ T + +Q L+ P+ + Sbjct: 675 FAKMEIVGQFNLGFIIVRLGDDLFIVDQHATDEKYNFEDLQRT---TVLQNQRLVVPQPL 731 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFG----PNAIAIREIPAILSKKNIPQLLRDIIDE 519 +L +++++ + G K E G + + P + + + + ++I Sbjct: 732 ELTAVNEMVLIDNLDVFEMNGFKFEVDGAAPTTKKVRLMAKPYSRNWEFGKEDIDELIFM 791 Query: 520 IIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 + D+ +T R+ + A+ AC S+ GR + EM RL+R M + C HGRPT Sbjct: 792 MQDAPSTVCRPSRVRAMFASRACRKSVMIGRALSVREMERLIRHMGEIDQPWNCPHGRPT 851 Query: 580 FIKL 583 L Sbjct: 852 MRHL 855 >gi|156355115|ref|XP_001623519.1| predicted protein [Nematostella vectensis] gi|156210229|gb|EDO31419.1| predicted protein [Nematostella vectensis] Length = 786 Score = 233 bits (593), Expect = 8e-59, Method: Composition-based stats. Identities = 97/445 (21%), Positives = 180/445 (40%), Gaps = 39/445 (8%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 + K ++QI +G+++ + A+KEL+ENSLDA ++ V+ + G +++DNG G+ Sbjct: 18 PIDRKSVHQICSGQVVLSLATAMKELLENSLDAGATSVDVRLKEHGSHSIEVSDNGAGVE 77 Query: 65 SEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ-I 121 + +H TSK+ D D S + TFG+RGEAL S+ A+S L++ +R G + Sbjct: 78 PQNFEALTLKHYTSKLKDFSDLSAVETFGYRGEALSSLCALSDLSITTRHISQTAGTKLD 137 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAYP 180 K+ S P A GT+V V +LF T+P R FL++ + E + V++ + Sbjct: 138 YDHNGKLKSKLPCAREQGTMVTVLNLFSTLPVRHKEFLRNIKKEFVKLVHVLQGYCLISA 197 Query: 181 KVSFTFS-TIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE------------- 226 T S + R + + + I+ V G + + + + Sbjct: 198 GTRITCSNHVAGKRSTVVSTHGSLQIKDNITAVFGPKQVQSLLPFKQLQPSEEDCTELNL 257 Query: 227 ------KSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPL 278 +SN T+ G+ R ++++ + FIN R + + Y Sbjct: 258 SVVSNSESNPFTITGFISKADHGSGRSSSDRQFFFINKRPCDLPKVSRVVSEVYHMY-NR 316 Query: 279 GRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK---------- 328 ++P V+L + + VDVNV P K + + ++ + S+ K + Sbjct: 317 HQFPFVMLDISLKRDAVDVNVTPDKRQVFLQQEKLLLATLRTSLIKMFDPGTSTYEVNQK 376 Query: 329 --KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDD 386 I S ++ S + P + ATS+ ++ Q+N L++ Sbjct: 377 VFTQIKLSPSPTQASHFSLAPGDNPSGNNAYAATSVGKYEKSCVRQKNFLNSLSNFKRKF 436 Query: 387 PTYSEDNDPVEESEATHYQLGIACA 411 S + + Sbjct: 437 SELSPCGEKKQNEPVAKQARLTEIF 461 Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 92/226 (40%), Gaps = 7/226 (3%) Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 S +++ Q + S + + + + + E + Q + +I++ Sbjct: 552 SRSHSLNTSITQNAEVRIFRAKISPENNSAAEEELTKNIEKGSFARMEIVGQFNLGFILA 611 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 + + L I+DQHA+ E+ FE +T + +Q L+ P ++L ++++++ E Sbjct: 612 KLDNDLFIIDQHASDEKYNFE---MQQRNTVLRNQRLIIPRKLELTAVNESILLDNLEIF 668 Query: 481 HRLGIKAERFGP----NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 + G + + + + +P + + + ++I + D+ R+ + Sbjct: 669 RKNGFEFQIDDDAPATQKVKLVSVPTSKNWTFGVEDVEELIFMLSDAPGILCRPTRVRKM 728 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 A+ AC SI G + M ++ M + + C HGRPT Sbjct: 729 FASRACRMSIMVGTALSHAHMQGIVGHMGQMEHPWNCPHGRPTMRH 774 >gi|71064118|gb|AAZ22526.1| Pms1p [Saccharomyces cerevisiae] Length = 877 Score = 233 bits (593), Expect = 9e-59, Method: Composition-based stats. Identities = 96/445 (21%), Positives = 174/445 (39%), Gaps = 37/445 (8%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I ++++ +++I +G++I + A+KEL++NS+DA +S++E + G + +DN Sbjct: 1 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANASQIEIIFKDYGLESIECSDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +H TSKI+ D + + T GFRGEAL S+ ++ L++ + Sbjct: 61 GDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVTTTTSPPKA 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMA 176 I+S + N GT V V LF +P R F K+ + + VI+ A Sbjct: 121 DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYA 180 Query: 177 IAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIG----------------EDFI 218 I + F+ I K + + N + + IS V G F Sbjct: 181 IINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFK 240 Query: 219 NNAVELNEK-------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIR 269 N + +I ++GY +F + ++ ++++N R V+ +L Sbjct: 241 NRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCN 300 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + ++P V L LE+ +DVNV P K I N + + + ++ Sbjct: 301 EVYKTFNNV-QFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDI----FKTTLSDY 355 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYAT-SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 L K+M S Q + S T+ + R +N + + Sbjct: 356 YNRQELALPKRMCSQSEQQAQKRLKTEVVDDRSTTHESDNENYHSARSESNQSNHAHFNS 415 Query: 389 YSEDNDPVEESEATHYQLGIACAQI 413 E V + + Sbjct: 416 TCEGTTGVIDKSNGTELTSVMDGNY 440 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 68/388 (17%), Positives = 133/388 (34%), Gaps = 32/388 (8%) Query: 208 RISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILST 267 + D + ++ E+ + G A+ N Sbjct: 495 EFQNITSPDKARSLEKVVEEPVFFDIDGEKFQEKAVLSQADGLVFVDNECHEHTNDCCHQ 554 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 R +T + EI+P +++V P K+ R I + ++++ Sbjct: 555 ERRGSTDTEQDDE--ADSIYAEIEPVEINVRT-PLKNS---------RKSISKDNYRSLS 602 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 G++ + + + N + S ++ K QEN + D L + Sbjct: 603 D-GLTHRKFEDEILEYNLSTKNFKEISKNGKQMSSIISKRKSEAQENIIKNKDELEDFEQ 661 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ----TTDGLVIVDQHAAHERLIFEKM 443 V ++ ++ Q + +II L IVDQHA+ E+ FE + Sbjct: 662 GEKYLTLTVSKN---DFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETL 718 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIR 498 + T SQ L+ P+ ++L + +++++ + G K E FG + + Sbjct: 719 QAV---TVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSR-VKLL 774 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSST---TYTLQDRIENILATMACYGSIRSGRKMQSI 555 +P ++I I + +I ++ A AC SI G+ + Sbjct: 775 SLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACKSSIMIGKPLNKK 834 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKL 583 M R++ + + C HGRPT L Sbjct: 835 TMTRVVHNLSELDKPWNCPHGRPTMRHL 862 >gi|225349726|gb|ACN87788.1| MutL [Lactobacillus casei] Length = 237 Score = 233 bits (593), Expect = 9e-59, Method: Composition-based stats. Identities = 77/240 (32%), Positives = 135/240 (56%), Gaps = 6/240 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI--SDDFSN 86 EL+ENS+DA++++++ +I+ G +++DNG G+ +++ A RH TSKI + D N Sbjct: 1 ELVENSIDAQATQIDVLISAAGLQEIRVSDNGIGIAPDDVATAFLRHATSKILTTRDLFN 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRD 146 +H+ GFRGEAL SI AV+ + L + + G QI + G ++ + A GT VEV D Sbjct: 61 VHSLGFRGEALASIAAVADVKLTT-AMDSGIGTQIHVKGGEVEAQSTAAHRRGTDVEVND 119 Query: 147 LFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP 206 LFF PARL ++KS+Q E I D++ R+A+A P ++FT S + + + G+ Sbjct: 120 LFFNTPARLKYMKSQQTELGKIVDIVSRLAMANPDIAFTVSHDGNMVVR---TAGQGDLR 176 Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 + ++ + G + V+ + + + G T +P R + N + +NGR +++ + Sbjct: 177 QTLAGIYGLSVARSMVDFKAQDLDFRVSGLTSLPETTRASRNYLSLVVNGRYIKNFQLTK 236 >gi|255728985|ref|XP_002549418.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240133734|gb|EER33290.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 665 Score = 233 bits (593), Expect = 9e-59, Method: Composition-based stats. Identities = 124/677 (18%), Positives = 232/677 (34%), Gaps = 105/677 (15%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I KL++ +++QI + I+ + EL++NSLDA ++ + + S I DNG Sbjct: 3 SIEKLNKSVVSQIRSHVILNSFEQVVGELLQNSLDAGANTISIRLDLESLS-IYIQDNGK 61 Query: 62 GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSI-------------GAVS--HL 106 G++ +++ + TSK +I TFG++GEAL ++ S L Sbjct: 62 GISPDDLERVTLENYTSKFKSGHKHISTFGYKGEALNALSSISKVSIISKVESFNSPYKL 121 Query: 107 TLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETN 166 T+ I+ GT+V ++F IP R +++ Sbjct: 122 TV---QQDRAVVQPYDINATTGYFQAEDLGPRGTVVTATNIFSNIPVRKQQIRNYPPARL 178 Query: 167 L--ITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPER------ISQVIGEDFI 218 + + VI I PKV + +++++ + N + + G Sbjct: 179 IDGVKQVIFESLIRNPKVKLQVMMVNKAQFQLDEVLSFDNRCCTSSYTKLLHHLFGLKVK 238 Query: 219 NNAVELNEKSNEITLQGYTG-IPTFNRGNANQFYVFINGRTVQDK-----------FILS 266 + K +I + G G P + Y F+NG+ Sbjct: 239 FEPICARFK--DIKVSGIIGTKPVNS---RKHQYFFVNGKPFPIPVDDLNKVNSLFTSFG 293 Query: 267 TIRTAYAETIPLGR--YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQK 324 T G+ Y L+++ + H I II + + I K Sbjct: 294 FTEDVNCSTKTTGKPFYKYATFLIKVRCAEKRSVFHDT---IHSNTWCIIMQIVERVISK 350 Query: 325 AINKKGISTSSVLSKKMISSFHQDNAPKTH------------------------------ 354 + G + + + S F K Sbjct: 351 YLETLGFESGNRIKAHTPSPFASPTKKKADKFILDTNSKLGNLNEVEMAGLVGSNKCIQN 410 Query: 355 ---LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-EATHYQLGIAC 410 LP L E + N +S N L + T+ E + +E + +Y++ Sbjct: 411 VHRLPTAPKKLAVKNEA--KRPNVISKNCLCHEQEYTFEESLEFSKEHLQPGNYKIIKQL 468 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS--TKITSQTLLTPEIIDLLEG 468 + + + +V++DQHA ER+ E+ Q+F K L P + Sbjct: 469 DKKFILVTLKEELMRIVVLDQHATDERIKVEEYLQEFVQSLQKNPGLRLKAPLTFSVASS 528 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAIL--SKKNIPQLLRD-IIDEIIDSST 525 E AL ++ + + GI + + +P +L + L+D ++ D + Sbjct: 529 EIALFEQYIANFNTFGISYGIEQKGQVIVTHLPLLLLNKISQDSEFLKDALLQHCYDLNE 588 Query: 526 ---------------TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 +Y L I ++ + AC +I G ++ +M RL+ ++ Sbjct: 589 HVKRAHVNLHDWFECSYHLPRIIIELINSKACRSAIMFGDELNHDDMERLVGKLRHCKLP 648 Query: 571 SQCNHGRPTFIKLKLSD 587 QC HGRP+ + L + Sbjct: 649 FQCAHGRPSIVPLARLE 665 >gi|126642159|ref|YP_001085143.1| methyl-directed mismatch repair enzyme [Acinetobacter baumannii ATCC 17978] gi|126388043|gb|ABO12541.1| methyl-directed mismatch repair enzyme [Acinetobacter baumannii ATCC 17978] Length = 369 Score = 233 bits (593), Expect = 1e-58, Method: Composition-based stats. Identities = 101/367 (27%), Positives = 181/367 (49%), Gaps = 42/367 (11%) Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 AY + ++ +L LE+DP +DVNVHP K IRF N + F+ ++ + + Sbjct: 1 MAYDGILHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLAQF 60 Query: 330 GISTSS-------------------------VLSKKMISSFHQDNAPKTHLPKYA--TSL 362 +++ L + ++ + P + P T Sbjct: 61 QTASADLAQAMKVDDIQNLSVQPQPKYQEQFTLHRTAQAADTAVDKPNGYQPSTELLTDF 120 Query: 363 TNTQEKLFLQENRLSTND--------------LLPSDDPTYSEDNDPVEESEATHYQLGI 408 N++ + + + L +S D + ++ + LGI Sbjct: 121 NNSRPQAVHYAEQTPKYNGSAQLNNALKTYLAPLRDQPTNFSVDENIEPVAKVDEFPLGI 180 Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDLLE 467 A AQ+H YI++Q T+GL+IVD HAAHER++ ++M+ ++ + TSQ LL P++I + Sbjct: 181 AIAQLHGIYILAQNTEGLIIVDMHAAHERILLQQMKNAWDKPEFWTSQQLLIPKVISISR 240 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 + + + L RLG++ + +G + +R +PAIL K + L+ ++++++ + Sbjct: 241 MQAVRVEDLKPQLERLGLEIDLYGDEQVIVRGVPAILQKADFENLIPELLNDLDPNDEAQ 300 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 L + + +LA MAC+G++R+ R++ EMN LLR+ME+ +SQCNHGRPT+ LS Sbjct: 301 GLLQKRDELLAGMACHGAVRAHRQLSLSEMNALLRQMEQTEFASQCNHGRPTWRAFPLSQ 360 Query: 588 IEKLFGR 594 ++KLF R Sbjct: 361 LDKLFAR 367 >gi|19880904|gb|AAM00551.1|AF458974_6 PMS1 [Saccharomyces cerevisiae] Length = 908 Score = 233 bits (593), Expect = 1e-58, Method: Composition-based stats. Identities = 96/445 (21%), Positives = 175/445 (39%), Gaps = 37/445 (8%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I ++++ +++I +G++I + A+KEL++NS+DA +S++E + G + +DN Sbjct: 32 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANASQIEIIFKDYGLESIECSDN 91 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +H TSKI+ D + + T GFRGEAL S+ ++ L++ + Sbjct: 92 GDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVTTTTSPPKA 151 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMA 176 I+S + N GT V V LF +P R F K+ + + VI+ A Sbjct: 152 DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYA 211 Query: 177 IAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIG----------------EDFI 218 I + F+ I K + + N + + IS V G F Sbjct: 212 IINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFK 271 Query: 219 NNAVELNEK-------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIR 269 N + +I ++GY +F + ++ ++++N R V+ +L Sbjct: 272 NRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCN 331 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + ++P V L LE+ +DVNV P K I N + + + ++ Sbjct: 332 EVYKTFNNV-QFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDI----FKTTLSDY 386 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYAT-SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 L K+M S Q + S T+ + +R +N + + Sbjct: 387 YNRQELALPKRMCSQSEQQAQKRLKTEVVDDRSTTHESDNENYHSSRSESNQSNHAHFNS 446 Query: 389 YSEDNDPVEESEATHYQLGIACAQI 413 E V + + Sbjct: 447 TCEGTTGVIDKSNGTELTSVMDGNY 471 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 68/388 (17%), Positives = 133/388 (34%), Gaps = 32/388 (8%) Query: 208 RISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILST 267 + D + ++ E+ + G A+ N Sbjct: 526 EFQNITSPDKARSLEKVVEEPVYFDIDGEKFQEKAVLSQADGLVFVDNECHEHTNDCCHQ 585 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 R +T + EI+P +++V P K+ R I + ++++ Sbjct: 586 ERRGSTDTEQDDE--ADSIYAEIEPVEINVRT-PLKNS---------RKSISKDNYRSLS 633 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 G++ + + + N + S ++ K QEN + D L + Sbjct: 634 D-GLTHRKFEDEILEYNLSTKNFKEISKNGKQMSSIISKRKSEAQENIIKNKDELEDFEQ 692 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ----TTDGLVIVDQHAAHERLIFEKM 443 V ++ ++ Q + +II L IVDQHA+ E+ FE + Sbjct: 693 GEKYLTLTVSKN---DFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETL 749 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIR 498 + T SQ L+ P+ ++L + +++++ + G K E FG + + Sbjct: 750 QAV---TVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSR-VKLL 805 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSST---TYTLQDRIENILATMACYGSIRSGRKMQSI 555 +P ++I I + +I ++ A AC SI G+ + Sbjct: 806 SLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSSIMIGKPLNKK 865 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKL 583 M R++ + + C HGRPT L Sbjct: 866 TMTRVVHNLSELDKPWNCPHGRPTMRHL 893 >gi|86161600|gb|ABC86933.1| PMS1 [Saccharomyces cerevisiae] gi|259149279|emb|CAY82521.1| Pms1p [Saccharomyces cerevisiae EC1118] Length = 873 Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats. Identities = 97/441 (21%), Positives = 178/441 (40%), Gaps = 37/441 (8%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I ++++ +++I +G++I + A+KEL++NS+DA ++++E + G + +DN Sbjct: 1 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +H TSKI+ D + + T GFRGEAL S+ ++ L++++ Sbjct: 61 GDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKA 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMA 176 I+S + N GT V V LF +P R F K+ + + VI+ A Sbjct: 121 DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYA 180 Query: 177 IAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIG----------------EDFI 218 I + F+ I K + + N + + IS V G F Sbjct: 181 IINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFK 240 Query: 219 NNAVELNEK-------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIR 269 N + +I ++GY +F + ++ ++++N R V+ +L Sbjct: 241 NRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCN 300 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + ++P V L LE+ +DVNV P K I N + + + ++ Sbjct: 301 EVYKTFNNV-QFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDI----FKTTLSDY 355 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYAT-SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 L K+M S Q + + S T+ + R +N + + Sbjct: 356 YNRQELALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHTARSESNQSNHAHFNS 415 Query: 389 YSEDNDPVEESEATHYQLGIA 409 + D +E T G Sbjct: 416 TTGVIDKSNGTELTSVMDGNY 436 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 68/388 (17%), Positives = 133/388 (34%), Gaps = 32/388 (8%) Query: 208 RISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILST 267 + D + ++ E+ + G A+ N Sbjct: 491 EFQNITSPDKARSLEKVVEEPVYFDIDGEKFQEKAVLSQADGLVFVDNECHEHTNDCCHQ 550 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 R +T + EI+P +++V P K+ R I + ++++ Sbjct: 551 ERRGSTDTEQDDE--ADSIYAEIEPVEINVRT-PLKNS---------RKSISKDNYRSLS 598 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 G++ + + + N + S ++ K QEN + D L + Sbjct: 599 D-GLTHRKFEDEILEYNLSTKNFKEISKNGKQMSSIISKRKSEAQENIIKNKDELEDFEQ 657 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ----TTDGLVIVDQHAAHERLIFEKM 443 V ++ ++ Q + +II L IVDQHA+ E+ FE + Sbjct: 658 GEKYLTLTVSKN---DFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETL 714 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIR 498 + T SQ L+ P+ ++L + +++++ + G K E FG + + Sbjct: 715 QAV---TVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSR-VKLL 770 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSST---TYTLQDRIENILATMACYGSIRSGRKMQSI 555 +P ++I I + +I ++ A AC SI G+ + Sbjct: 771 SLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSSIMIGKPLNKK 830 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKL 583 M R++ + + C HGRPT L Sbjct: 831 TMTRVVHNLSELDKPWNCPHGRPTMRHL 858 >gi|46562124|ref|NP_014317.2| Pms1p [Saccharomyces cerevisiae S288c] gi|110282983|sp|P14242|PMS1_YEAST RecName: Full=DNA mismatch repair protein PMS1; AltName: Full=Postmeiotic segregation protein 1 gi|86161598|gb|ABC86932.1| PMS1 [Saccharomyces cerevisiae] gi|86161602|gb|ABC86934.1| PMS1 [Saccharomyces cerevisiae] gi|86161604|gb|ABC86935.1| PMS1 [Saccharomyces cerevisiae] gi|86161606|gb|ABC86936.1| PMS1 [Saccharomyces cerevisiae] gi|151944452|gb|EDN62730.1| postmeiotic segregation protein [Saccharomyces cerevisiae YJM789] gi|190409071|gb|EDV12336.1| DNA mismatch repair protein PMS1 [Saccharomyces cerevisiae RM11-1a] gi|285814569|tpg|DAA10463.1| TPA: Pms1p [Saccharomyces cerevisiae S288c] Length = 873 Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats. Identities = 97/441 (21%), Positives = 178/441 (40%), Gaps = 37/441 (8%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I ++++ +++I +G++I + A+KEL++NS+DA ++++E + G + +DN Sbjct: 1 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +H TSKI+ D + + T GFRGEAL S+ ++ L++++ Sbjct: 61 GDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKA 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMA 176 I+S + N GT V V LF +P R F K+ + + VI+ A Sbjct: 121 DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYA 180 Query: 177 IAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIG----------------EDFI 218 I + F+ I K + + N + + IS V G F Sbjct: 181 IINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFK 240 Query: 219 NNAVELNEK-------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIR 269 N + +I ++GY +F + ++ ++++N R V+ +L Sbjct: 241 NRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCN 300 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + ++P V L LE+ +DVNV P K I N + + + ++ Sbjct: 301 EVYKTFNNV-QFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDI----FKTTLSDY 355 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYAT-SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 L K+M S Q + + S T+ + R +N + + Sbjct: 356 YNRQELALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHTARSESNQSNHAHFNS 415 Query: 389 YSEDNDPVEESEATHYQLGIA 409 + D +E T G Sbjct: 416 TTGVIDKSNGTELTSVMDGNY 436 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 68/388 (17%), Positives = 133/388 (34%), Gaps = 32/388 (8%) Query: 208 RISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILST 267 + D + ++ E+ + G A+ N Sbjct: 491 EFQNITSPDKARSLEKVVEEPVYFDIDGEKFQEKAVLSQADGLVFVDNECHEHTNDCCHQ 550 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 R +T + EI+P +++V P K+ R I + ++++ Sbjct: 551 ERRGSTDTEQDDE--ADSIYAEIEPVEINVRT-PLKNS---------RKSISKDNYRSLS 598 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 G++ + + + N + S ++ K QEN + D L + Sbjct: 599 D-GLTHRKFEDEILEYNLSTKNFKEISKNGKQMSSIISKRKSEAQENIIKNKDELEDFEQ 657 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ----TTDGLVIVDQHAAHERLIFEKM 443 V ++ ++ Q + +II L IVDQHA+ E+ FE + Sbjct: 658 GEKYLTLTVSKN---DFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETL 714 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIR 498 + T SQ L+ P+ ++L + +++++ + G K E FG + + Sbjct: 715 QAV---TVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSR-VKLL 770 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSST---TYTLQDRIENILATMACYGSIRSGRKMQSI 555 +P ++I I + +I ++ A AC SI G+ + Sbjct: 771 SLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSSIMIGKPLNKK 830 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKL 583 M R++ + + C HGRPT L Sbjct: 831 TMTRVVHNLSELDKPWNCPHGRPTMRHL 858 >gi|291391906|ref|XP_002712385.1| PREDICTED: postmeiotic segregation 1 [Oryctolagus cuniculus] Length = 932 Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats. Identities = 82/338 (24%), Positives = 152/338 (44%), Gaps = 19/338 (5%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEGV 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D + T+GFRGEAL SI V+ +++ +R +N Q Sbjct: 62 KAVDAPVMAVKYYTSKINSHEDLERLTTYGFRGEALGSICCVAEVSITTRTAADNFSTQY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E + D++ I Sbjct: 122 VLDSSGHIVSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKVQDLLISYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQG 235 P + F K+ ++ ++ + + V+G + N + + ++++L G Sbjct: 182 LKPDLRIVFVHNKAVVWQ---KTKVSDHKMALMSVLGTAVMGNMESFQCCSEESQVSLSG 238 Query: 236 YTGIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLL 287 + + + ++FIN R + K IL IR Y YP+ L Sbjct: 239 FLPKRDADHSLTSLSTPERSFIFINSRPIHQKDILKLIRQYYTLKCLKESTRLYPIFFLK 298 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKA 325 +++ VDVN+ P KS + +N + + + Sbjct: 299 IDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTC 336 >gi|323346896|gb|EGA81175.1| Pms1p [Saccharomyces cerevisiae Lalvin QA23] Length = 873 Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats. Identities = 97/441 (21%), Positives = 178/441 (40%), Gaps = 37/441 (8%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I ++++ +++I +G++I + A+KEL++NS+DA ++++E + G + +DN Sbjct: 1 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +H TSKI+ D + + T GFRGEAL S+ ++ L++++ Sbjct: 61 GDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKA 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMA 176 I+S + N GT V V LF +P R F K+ + + VI+ A Sbjct: 121 DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYA 180 Query: 177 IAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIG----------------EDFI 218 I + F+ I K + + N + + IS V G F Sbjct: 181 IINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFK 240 Query: 219 NNAVELNEK-------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIR 269 N + +I ++GY +F + ++ ++++N R V+ +L Sbjct: 241 NRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCN 300 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + ++P V L LE+ +DVNV P K I N + + + ++ Sbjct: 301 EVYKTFNNV-QFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDI----FKTTLSDY 355 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYAT-SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 L K+M S Q + + S T+ + R +N + + Sbjct: 356 YNRQELALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHTARSESNQSNHAHFNS 415 Query: 389 YSEDNDPVEESEATHYQLGIA 409 + D +E T G Sbjct: 416 TTGVIDKSNGTELTSVMDGNY 436 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 68/388 (17%), Positives = 133/388 (34%), Gaps = 32/388 (8%) Query: 208 RISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILST 267 + D + ++ E+ + G A+ N Sbjct: 491 EFQNITSPDKARSLEKVVEEPVYFDIDGEKFQEKAVLSQADGLVFVDNECHEHTNDCCHQ 550 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 R +T + EI+P +++V P K+ R I + ++++ Sbjct: 551 ERRGSTDTEQDDE--ADSIYAEIEPVEINVRT-PLKNS---------RKSISKDNYRSLS 598 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 G++ + + + N + S ++ K QEN + D L + Sbjct: 599 D-GLTHRKFEDEILEYNLSTKNFKEISKNGKQMSSIISKRKSEAQENIIKNKDELEDFEQ 657 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ----TTDGLVIVDQHAAHERLIFEKM 443 V ++ ++ Q + +II L IVDQHA+ E+ FE + Sbjct: 658 GEKYLTLTVSKN---DFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETL 714 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIR 498 + T SQ L+ P+ ++L + +++++ + G K E FG + + Sbjct: 715 QAV---TVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSR-VKLL 770 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSST---TYTLQDRIENILATMACYGSIRSGRKMQSI 555 +P ++I I + +I ++ A AC SI G+ + Sbjct: 771 SLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSSIMIGKPLNKK 830 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKL 583 M R++ + + C HGRPT L Sbjct: 831 TMTRVVHNLSELDKPWNCPHGRPTMRHL 858 >gi|157136917|ref|XP_001663861.1| DNA mismatch repair protein pms2 [Aedes aegypti] gi|108869823|gb|EAT34048.1| DNA mismatch repair protein pms2 [Aedes aegypti] Length = 926 Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats. Identities = 97/432 (22%), Positives = 178/432 (41%), Gaps = 46/432 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI + +++I +G+++ + A+KEL+EN++DA ++ VE + G +++DNG Sbjct: 63 KISAIDRDTVHRICSGQVVLNLATAVKELVENAIDAGATVVEVKLKEQGADLVEVSDNGS 122 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSK+ + D + I TFGFRGEAL S+ A+S + +++R G Sbjct: 123 GVEEKNFEGLTAKYHTSKLKEFADLACIETFGFRGEALSSLCALSDMVVVTRHETAPHGT 182 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 ++ + I P A GT V + +LF T+P R F K+ + E + +++ + Sbjct: 183 KLELDHRGAIVKRSPCARAVGTTVSLSNLFATLPVRKKEFHKNIKREFIKMCQILQAYCL 242 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKS------- 228 V S K ST G + + I+ V G V+L Sbjct: 243 VSVGVRIICSNQNKKGVKSVIMSTQGSNSVLDNITTVFGSKQSTELVQLKPAISSSGKIL 302 Query: 229 -----------------------NEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKF 263 + T++GY R + ++ + F+N R + K Sbjct: 303 DLNESDFDDTLSLTQEEVDKLNLSRYTIEGYISSCAHGSGRSSKDRQFFFVNSRPCEPKA 362 Query: 264 ILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ 323 I+ + Y + + + P V L L++ VDVN+ P K I N I+ + +S+ Sbjct: 363 IIKMVNETYHKY-NVNQCPFVYLNLKMARSDVDVNLTPDKRQILVNNEKILLLALKKSLM 421 Query: 324 K-------AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL 376 K + + S+ IS +D + + + N + L +R Sbjct: 422 KTYGTIPSTFKMQNLDVSATSRLLNISVMSKDGGDEDSVDDQSMEAPNPRRMLAAFSHRG 481 Query: 377 STNDLLPSDDPT 388 ++ SD Sbjct: 482 ASAGNSTSDSTP 493 Score = 153 bits (387), Expect = 7e-35, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 7/204 (3%) Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + + +++ E + Q + +II++ L I+DQHA E+ FE + Sbjct: 708 NPSNNRAAEDELQTEISKDRFAQMEIIGQFNLGFIIARLEQDLFIIDQHATDEKYNFEDL 767 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG----PNAIAIRE 499 ++ T + +Q L+ P+ ++L ++M++ E G K E G + + Sbjct: 768 QRT---TVLQNQKLVVPQQLELTAVNEMILMDNLEIFEMNGFKFEIDGSAEPTRKVKLVA 824 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P + + + + ++I + D+ + R+ + A+ AC S+ G+ + EM R Sbjct: 825 KPFSKNWEFGKEDIDELIFMLQDAPNSVCRPSRVRAMFASRACRKSVMIGKALSKAEMRR 884 Query: 560 LLREMEKNPNSSQCNHGRPTFIKL 583 L+ M + C HGRPT L Sbjct: 885 LVSHMGEIEQPWNCPHGRPTMRHL 908 >gi|19880918|gb|AAM00563.1|AF458976_6 PMS1 [Saccharomyces cerevisiae] Length = 908 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 96/445 (21%), Positives = 174/445 (39%), Gaps = 37/445 (8%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I ++++ +++I +G++I + A+KEL++NS+DA +S++E + G + +DN Sbjct: 32 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANASQIEIIFKDYGLESIECSDN 91 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +H TSKI+ D + + T GFRGEAL S+ ++ L++ + Sbjct: 92 GDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVTTTTSPPKA 151 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMA 176 I+S + N GT V V LF +P R F K+ + + VI+ A Sbjct: 152 DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYA 211 Query: 177 IAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIG----------------EDFI 218 I + F+ I K + + N + + IS V G F Sbjct: 212 IINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFK 271 Query: 219 NNAVELNEK-------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIR 269 N + +I ++GY +F + ++ ++++N R V+ +L Sbjct: 272 NRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCN 331 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + ++P V L LE+ +DVNV P K I N + + + ++ Sbjct: 332 EVYKTFNNV-QFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDI----FKTTLSDY 386 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYAT-SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 L K+M S Q + S T+ + R +N + + Sbjct: 387 YNRQELALPKRMCSQSEQQAQKRLKTEVVDDRSTTHESDNENYHSARSESNQSNHAHFNS 446 Query: 389 YSEDNDPVEESEATHYQLGIACAQI 413 E V + + Sbjct: 447 TCEGTTGVIDKSNGTELTSVMDGNY 471 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 68/388 (17%), Positives = 133/388 (34%), Gaps = 32/388 (8%) Query: 208 RISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILST 267 + D + ++ E+ + G A+ N Sbjct: 526 EFQNITSPDKARSLEKVVEEPVFFDIDGEKFQEKAVLSQADGLVFVDNECHEHTNDCCHQ 585 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 R +T + EI+P +++V P K+ R I + ++++ Sbjct: 586 ERRGSTDTEQDDE--ADSIYAEIEPVEINVRT-PLKNS---------RKSISKDNYRSLS 633 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 G++ + + + N + S ++ K QEN + D L + Sbjct: 634 D-GLTHRKFEDEILEYNLSTKNFKEISKNGKQMSSIISKRKSEAQENIIKNKDELEDFEQ 692 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ----TTDGLVIVDQHAAHERLIFEKM 443 V ++ ++ Q + +II L IVDQHA+ E+ FE + Sbjct: 693 GEKYLTLTVSKN---DFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETL 749 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIR 498 + T SQ L+ P+ ++L + +++++ + G K E FG + + Sbjct: 750 QAV---TVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSR-VKLL 805 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSST---TYTLQDRIENILATMACYGSIRSGRKMQSI 555 +P ++I I + +I ++ A AC SI G+ + Sbjct: 806 SLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACKSSIMIGKPLNKK 865 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKL 583 M R++ + + C HGRPT L Sbjct: 866 TMTRVVHNLSELDKPWNCPHGRPTMRHL 893 >gi|290978294|ref|XP_002671871.1| predicted protein [Naegleria gruberi] gi|284085443|gb|EFC39127.1| predicted protein [Naegleria gruberi] Length = 662 Score = 232 bits (591), Expect = 2e-58, Method: Composition-based stats. Identities = 109/487 (22%), Positives = 190/487 (39%), Gaps = 59/487 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+ LSE++IN+IAAGE+I PS AIKEL+ENSLDA + + G +FQITDNG Sbjct: 20 KIKPLSEEVINKIAAGEVIAAPSNAIKELLENSLDAGADSITIEFGDAGLKYFQITDNGC 79 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++++ + +RH TSK+S +D +I TFGFRGEAL S+ +H+T+ S+ Q +T Sbjct: 80 GIGAKDLEIVCERHTTSKLSSFEDLRSIATFGFRGEALSSVSTCAHVTITSKTEQQSTAL 139 Query: 120 QIAISGEKISSVRPVAMNP-GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 K++ GTI+ +LFF R + + E I ++ A+ Sbjct: 140 FATYRDGKLTGPMKKRSGARGTIIRAENLFFDNKTRRESV-NLNTEPKAIQKIVTAYALF 198 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 VS T + ++ T N + I + G +E + + +I L G Sbjct: 199 NTGVSITLKKQGETKPIVHTL-TKNNVRQNIKALFGPKIEKEIIEADINNEKIELTGK-- 255 Query: 239 IPTFNRGNANQFYVFIN-GRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 F N + ++K I +V Sbjct: 256 ------------MYFTNVNYSSKEKAFTLFIN--------------------------NV 277 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 N+HP K + + I + ++K + S + +S+K S K+ P Sbjct: 278 NMHPTKKEVAVLDEDRIIEEVKDVLRKKLLGSNSSRTFEVSQKATPS-------KSFTPI 330 Query: 358 YATSLTNTQE-KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 +L N E + L++ L + ++ + +Q + + Sbjct: 331 LPPNLINDDEDDAIIPTPSLTSPKLATQKELPKNKVRTSASDQTGQIHQYFPSLKRNFTE 390 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 + + Q +R + + + L L ++ ++ Sbjct: 391 EEEEDEDAEISVSAQPVTKKRKENSQSKSPEAEHEENVDDLE-----SLKSLRNSINAKN 445 Query: 477 DEDLHRL 483 +L +L Sbjct: 446 HAELEKL 452 >gi|157124912|ref|XP_001660584.1| DNA mismatch repair protein pms2 [Aedes aegypti] gi|108873824|gb|EAT38049.1| DNA mismatch repair protein pms2 [Aedes aegypti] Length = 874 Score = 232 bits (591), Expect = 2e-58, Method: Composition-based stats. Identities = 96/432 (22%), Positives = 178/432 (41%), Gaps = 46/432 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI + +++I +G+++ + A+KEL+EN++DA ++ VE + G +++DNG Sbjct: 19 KISAIDRDTVHRICSGQVVLNLATAVKELVENAIDAGATVVEVKLKEQGADLVEVSDNGS 78 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSK+ + D + I TFGFRGEAL S+ A+S + +++R G Sbjct: 79 GVEEKNFEGLTAKYHTSKLKEFADLACIETFGFRGEALSSLCALSDMVVVTRHETAPHGT 138 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 ++ + I P A GT V + +LF T+P R F K+ + E + +++ + Sbjct: 139 KLELDHRGAIVKRSPCARAVGTTVSLSNLFATLPVRKKEFQKNIKREFIKMCQILQAYCL 198 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKS------- 228 V S K ST G + + I+ V G ++L Sbjct: 199 VSVGVRIICSNQNKKGVKSVIMSTQGSNSVLDNITTVFGSKQSTELIQLKPAISSSGKIL 258 Query: 229 -----------------------NEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKF 263 + T++GY R + ++ + F+N R + K Sbjct: 259 DLNESDFDDTLSLTQEEVDKLNLSRYTIEGYISSCAHGSGRSSKDRQFFFVNSRPCEPKA 318 Query: 264 ILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ 323 I+ + Y + + + P V L L++ VDVN+ P K I N I+ + +S+ Sbjct: 319 IIKMVNETYHKY-NVNQCPFVYLNLKMARSDVDVNLTPDKRQILVNNEKILLLALKKSLM 377 Query: 324 K-------AINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL 376 K + + S+ IS +D + + + N + L +R Sbjct: 378 KTYGTIPSTFKMQNLDVSATSRLLNISVMSKDGGDEDSVDDQSMEAPNPRRMLSAFSHRG 437 Query: 377 STNDLLPSDDPT 388 ++ SD Sbjct: 438 ASAGNSTSDSTP 449 Score = 153 bits (387), Expect = 7e-35, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 7/204 (3%) Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + + +++ E + Q + +II++ L I+DQHA E+ FE + Sbjct: 656 NPSNNRAAEDELQTEISKDRFAQMEIIGQFNLGFIIARLEQDLFIIDQHATDEKYNFEDL 715 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG----PNAIAIRE 499 ++ T + +Q L+ P+ ++L ++M++ E G K E G + + Sbjct: 716 QRT---TVLQNQKLVVPQQLELTAVNEMILMDNLEIFEMNGFKFEIDGSAEPTRKVKLVA 772 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 P + + + + ++I + D+ + R+ + A+ AC S+ G+ + EM R Sbjct: 773 KPFSKNWEFGKEDIDELIFMLQDAPNSVCRPSRVRAMFASRACRKSVMIGKALSKAEMRR 832 Query: 560 LLREMEKNPNSSQCNHGRPTFIKL 583 L+ M + C HGRPT L Sbjct: 833 LVSHMGEIEQPWNCPHGRPTMRHL 856 >gi|302772799|ref|XP_002969817.1| hypothetical protein SELMODRAFT_171139 [Selaginella moellendorffii] gi|300162328|gb|EFJ28941.1| hypothetical protein SELMODRAFT_171139 [Selaginella moellendorffii] Length = 705 Score = 232 bits (591), Expect = 2e-58, Method: Composition-based stats. Identities = 80/334 (23%), Positives = 153/334 (45%), Gaps = 29/334 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I + + I++I +G++I + A+KEL+ENSLDA ++ +E + G +++DNG Sbjct: 10 PIHPIDKASIHRICSGQVILDLATAVKELVENSLDAGATSIEVKLKEHGGDAIEVSDNGS 69 Query: 62 GMTSE---------EIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMS 110 G++S+ ++ ++ TSK+SD D ++ +FGFRGEAL S+ +++ +++ + Sbjct: 70 GVSSDNYQVFFLSLDLFGLTLKYHTSKLSDFSDLQSLTSFGFRGEALSSLCSLADVSIHT 129 Query: 111 RPPQNNTGAQI-AISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLI 168 R ++ TG +I I S A GT V V LF +P R FL++ + E + + Sbjct: 130 RTKEDETGTRISYNRAGLIVSKETAARQVGTTVTVSKLFSPLPVRHKEFLRNVRREYSRM 189 Query: 169 TDVIRRMAIAYPKVSFTFSTI-KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK 227 +++ A+ V + + + ++ G+ E I + G + Sbjct: 190 IAILQAYALISKNVRLVCTNLVGKSSRSTILRTQGGSVRENIVTIFGPKTMACLDPPGSG 249 Query: 228 SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLL 287 S RG++++ + F+NGR V + Y +YP+ VL Sbjct: 250 SG--------------RGSSDRQFFFVNGRPVDLPKFSKLLNELYKSFNSQ-QYPMAVLN 294 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 + DVNV P K + + + + + + Sbjct: 295 FRLPTTAYDVNVTPDKRKLFLHSESSFMDGLRNA 328 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 53/242 (21%), Positives = 93/242 (38%), Gaps = 13/242 (5%) Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 P A E ++ + + +D E+ + + Q + Sbjct: 459 APPNAFPKEKNFETARPADHSSNPQNRSATDGEALGEECGGLLSEAPLLKKCAKILGQFN 518 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +II++ L I+DQHA+ E+ FE++ ST + Q LL P + L E I Sbjct: 519 LGFIIARLDSDLFIIDQHASDEKYNFERL---SKSTVLNRQPLLRPMPLHLSSAEEITIS 575 Query: 475 EHDEDLHRLGIKAERFGP----NAIAIREIP----AILSKKNIPQLLRDIIDEIIDSSTT 526 H E + G I + +P ++ +L+ + ++ SS+ Sbjct: 576 THMEVFRQNGFDFTEQEDAPPGQRILLSAVPFSKNVTFGVSDVQELVSLLSEDYGSSSSH 635 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 R+ ++LA+ AC SI G + EM +++R + C HGRPT L Sbjct: 636 LVQPSRVRSMLASRACRSSIMIGDALSKKEMEKVVRHLADLDAPWNCPHGRPTMRHL--Y 693 Query: 587 DI 588 D+ Sbjct: 694 DL 695 >gi|19880869|gb|AAM00521.1|AF458969_6 PMS1 [Saccharomyces cerevisiae] gi|19880925|gb|AAM00569.1|AF458977_6 PMS1 [Saccharomyces cerevisiae] gi|791102|emb|CAA60176.1| DNA mismatch repair protein [Saccharomyces cerevisiae] gi|1301977|emb|CAA95957.1| PMS1 [Saccharomyces cerevisiae] gi|2253174|emb|CAA95956.1| PMS1 [Saccharomyces cerevisiae] Length = 904 Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats. Identities = 97/441 (21%), Positives = 178/441 (40%), Gaps = 37/441 (8%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I ++++ +++I +G++I + A+KEL++NS+DA ++++E + G + +DN Sbjct: 32 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDN 91 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +H TSKI+ D + + T GFRGEAL S+ ++ L++++ Sbjct: 92 GDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKA 151 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMA 176 I+S + N GT V V LF +P R F K+ + + VI+ A Sbjct: 152 DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYA 211 Query: 177 IAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIG----------------EDFI 218 I + F+ I K + + N + + IS V G F Sbjct: 212 IINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFK 271 Query: 219 NNAVELNEK-------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIR 269 N + +I ++GY +F + ++ ++++N R V+ +L Sbjct: 272 NRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCN 331 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + ++P V L LE+ +DVNV P K I N + + + ++ Sbjct: 332 EVYKTFNNV-QFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDI----FKTTLSDY 386 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYAT-SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 L K+M S Q + + S T+ + R +N + + Sbjct: 387 YNRQELALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHTARSESNQSNHAHFNS 446 Query: 389 YSEDNDPVEESEATHYQLGIA 409 + D +E T G Sbjct: 447 TTGVIDKSNGTELTSVMDGNY 467 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 68/388 (17%), Positives = 133/388 (34%), Gaps = 32/388 (8%) Query: 208 RISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILST 267 + D + ++ E+ + G A+ N Sbjct: 522 EFQNITSPDKARSLEKVVEEPVYFDIDGEKFQEKAVLSQADGLVFVDNECHEHTNDCCHQ 581 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 R +T + EI+P +++V P K+ R I + ++++ Sbjct: 582 ERRGSTDTEQDDE--ADSIYAEIEPVEINVRT-PLKNS---------RKSISKDNYRSLS 629 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 G++ + + + N + S ++ K QEN + D L + Sbjct: 630 D-GLTHRKFEDEILEYNLSTKNFKEISKNGKQMSSIISKRKSEAQENIIKNKDELEDFEQ 688 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ----TTDGLVIVDQHAAHERLIFEKM 443 V ++ ++ Q + +II L IVDQHA+ E+ FE + Sbjct: 689 GEKYLTLTVSKN---DFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETL 745 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIR 498 + T SQ L+ P+ ++L + +++++ + G K E FG + + Sbjct: 746 QAV---TVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSR-VKLL 801 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSST---TYTLQDRIENILATMACYGSIRSGRKMQSI 555 +P ++I I + +I ++ A AC SI G+ + Sbjct: 802 SLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSSIMIGKPLNKK 861 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKL 583 M R++ + + C HGRPT L Sbjct: 862 TMTRVVHNLSELDKPWNCPHGRPTMRHL 889 >gi|256270259|gb|EEU05477.1| Pms1p [Saccharomyces cerevisiae JAY291] Length = 877 Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats. Identities = 95/445 (21%), Positives = 176/445 (39%), Gaps = 37/445 (8%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I ++++ +++I +G++I + A+KEL++NS+DA ++++E + G + +DN Sbjct: 1 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +H TSKI+ D + + T GFRGEAL S+ ++ L++++ Sbjct: 61 GDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKA 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMA 176 I+S + N GT V V LF +P R F K+ + + VI+ A Sbjct: 121 DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYA 180 Query: 177 IAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIG----------------EDFI 218 I + F+ I K + + N + + IS V G F Sbjct: 181 IINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFK 240 Query: 219 NNAVELNEK-------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIR 269 N + +I ++GY +F + ++ ++++N R V+ +L Sbjct: 241 NRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCN 300 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + ++P V L LE+ +DVNV P K I N + + + ++ Sbjct: 301 EVYKTFNNV-QFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDI----FKTTLSDY 355 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYAT-SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 L K+M S Q + S T+ + R +N ++ + Sbjct: 356 YNRQELALPKRMCSQSEQQAQKRLKTEVVDDRSTTHESDNENYHSARSESNQSNHANFNS 415 Query: 389 YSEDNDPVEESEATHYQLGIACAQI 413 E V + + Sbjct: 416 TCEGTTGVIDKSNGTELTSVMDGNY 440 Score = 134 bits (336), Expect = 5e-29, Method: Composition-based stats. Identities = 68/388 (17%), Positives = 133/388 (34%), Gaps = 32/388 (8%) Query: 208 RISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILST 267 + D + ++ E+ + G A+ N Sbjct: 495 EFQNITSPDKARSLEKVVEEPVYFDIDGEKFQEKAVLSQADGLVFVDNECHEHTNDCCHQ 554 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 R +T + EI+P +++V P K+ R I + ++++ Sbjct: 555 ERRGSTDTEQDDE--ADSIYAEIEPVEINVRT-PLKNS---------RKSISKDNYRSLS 602 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 G++ + + + N + S ++ K QEN + D L + Sbjct: 603 D-GLTHRKFEDEILEYNLSTKNFKEISKNGKQMSSIISKRKSEAQENIIKNKDELEDFEQ 661 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ----TTDGLVIVDQHAAHERLIFEKM 443 V ++ ++ Q + +II L IVDQHA+ E+ FE + Sbjct: 662 GEKYLTLTVSKN---DFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETL 718 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIR 498 + T SQ L+ P+ ++L + +++++ + G K E FG + + Sbjct: 719 QAV---TVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSR-VKLL 774 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSST---TYTLQDRIENILATMACYGSIRSGRKMQSI 555 +P ++I I + +I ++ A AC SI G+ + Sbjct: 775 SLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSSIMIGKPLNKE 834 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKL 583 M R++ + + C HGRPT L Sbjct: 835 TMTRVVHNLSELDKPWNCPHGRPTMRHL 862 >gi|330927226|ref|XP_003301792.1| hypothetical protein PTT_13379 [Pyrenophora teres f. teres 0-1] gi|311323230|gb|EFQ90113.1| hypothetical protein PTT_13379 [Pyrenophora teres f. teres 0-1] Length = 934 Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats. Identities = 95/415 (22%), Positives = 169/415 (40%), Gaps = 21/415 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L QI +G+++ PS +KELI+NSLDA + + IA Q+ D+G G Sbjct: 13 IAALPPATARQIGSGQVLVDPSSVVKELIDNSLDARAKSIFVDIAANTIDSIQVKDDGHG 72 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNI--HTFGFRGEALPSIGAVS-HLTLMSRPPQNNT 117 + +E+ P+ +R+CTSKI D D N+ GFRGEAL S+ +S L + +R Sbjct: 73 IPAEDRPLVCRRYCTSKIRDFHDLRNVGGKWLGFRGEALSSMAEMSASLDVATRVEGEPV 132 Query: 118 GAQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRM 175 + +++S + GT V+V F IP R K+ I +++ Sbjct: 133 AVKIKYNRNGELASTVHDSHPVGTTVKVAKFFDYIPVRKQTALKNSSRFLAKIRRLMQAY 192 Query: 176 AIAYPKVSFTFSTIKSNRYK---MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 A+A P F +K+ + + N + +V+G+D +++ Sbjct: 193 ALARPTTRFRLHVLKARNSNSDFVYAPKVDANVEDAALKVVGKDCALQCDWTAMEADGFE 252 Query: 233 LQGYTGIPTFNRGNANQFYVFI--NGRT-VQDKFILSTIRTAYAETIPLGRY-------P 282 + + PT NR + F+ +GR + + I A+ E + P Sbjct: 253 IHAFLPKPTANRSKISGQGAFVSADGRPLSSSRGTIKQIVVAFKERLRKSNSSLAGVKEP 312 Query: 283 VVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI 342 + + P D N+ PAK + F N ++ + ++ + + + +S + Sbjct: 313 FFCMNIICPPGSYDPNIEPAKDDVMFENSEVVLS-VVNRLLTSYYPEASGDASDEEPPLS 371 Query: 343 SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 S H D P+T S+ + + E R + + Y D + +E Sbjct: 372 SQQHLDTPPETLQGSDGPSINVQEHATPIPEGRPKSREQPRWRSTMYGIDEEDIE 426 >gi|321461542|gb|EFX72573.1| putative MLH2, MutL protein 2 [Daphnia pulex] Length = 877 Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats. Identities = 79/336 (23%), Positives = 150/336 (44%), Gaps = 13/336 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L + I A +I +KEL+ENSLDA S+ V + G S ++TDNG G Sbjct: 7 ISELPPSTVKLITATQIATSVCNIVKELVENSLDASSTVVRVKLENSGLSKIEVTDNGSG 66 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ E + H TSKI D + T+GFRGEAL +I AV+ L++ ++ ++ + Sbjct: 67 VSKENVLKMALPHYTSKISQHQDLEALSTYGFRGEALAAICAVAKLSVTTKTAEDPVAST 126 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMA 176 + + V+P ++ GT+V + LF+ IP R + K ++ E + +++ Sbjct: 127 YTMDSNGDVVDVKPSHLSQGTLVVMTSLFWNIPVRKQYYQTPKRKKDELIKVEELLLSYG 186 Query: 177 IAYPKVSFTFSTIKSNRYKM-NFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 + +P++ + S ++ N + + I + + + + + + Sbjct: 187 LIHPELHLSLHHDHSLIWQKNRATDFTANIRQTLGHGICSNMEFISEDEVIQMVLVVPKR 246 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR-----YPVVVLLLEI 290 + R ++ + FIN R V K I ++ I G YP+ ++ L+ Sbjct: 247 TAPLDICYRNRPDRCFTFINQRPVISKDIEKLMKE-LYGFIRDGDQKSAVYPIFIVSLQF 305 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 +VDVNV P K+ + + + I + + + Sbjct: 306 PGDEVDVNVEPNKTKVLMKRQGDVLELIRKRVSDIL 341 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 88/252 (34%), Gaps = 33/252 (13%) Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 + P T ++ + T+ + D + N +E S+ + Sbjct: 619 SQTPVIRTERAPSRSVVASAPPPKRTSSSI---DFSMDILNQSLESSQLKTKDQWFCLKK 675 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKM-RQDFNSTKITSQTLLTPEIIDLLEGECA 471 I + + ++ V+ +E +++ ++ + ++ S +L + Sbjct: 676 IESGSWLCSNRNDVMAVNFTRLYEMILYTRLVNEHVIPSRAVSNPMLIDKKTFGDLMSWR 735 Query: 472 LIMEHDEDLH-------------------RLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 ++ + RLG+ ++ G + + ++PA + K ++ Sbjct: 736 KLLSLPSEWETATTRTITDSRVVANGVGIRLGVDSDDAG---VVVYQVPANVQKFDL-ND 791 Query: 513 LRDIIDEIIDSSTT--YTLQDRIENILATMACYGSIRSGRKMQSI--EMNRLLREMEKNP 568 +R+++ ++ +T +I L + A + +GR + E+ LL + Sbjct: 792 VRNLLRQVTKDGSTVESCRPGQIIMYLKSEAARLA--AGRCTEPETNEVCELLEQWLSTD 849 Query: 569 NSSQCNHGRPTF 580 + C HG P F Sbjct: 850 PENVCLHGEPVF 861 >gi|172203|gb|AAA34885.1| DNA mismatch repair protein [Saccharomyces cerevisiae] Length = 904 Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats. Identities = 97/441 (21%), Positives = 178/441 (40%), Gaps = 37/441 (8%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I ++++ +++I +G++I + A+KEL++NS+DA ++++E + G + +DN Sbjct: 32 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDN 91 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +H TSKI+ D + + T GFRGEAL S+ ++ L++++ Sbjct: 92 GDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKA 151 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMA 176 I+S + N GT V V LF +P R F K+ + + VI+ A Sbjct: 152 DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYA 211 Query: 177 IAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIG----------------EDFI 218 I + F+ I K + + N + + IS V G F Sbjct: 212 IINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFK 271 Query: 219 NNAVELNEK-------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIR 269 N + +I ++GY +F + ++ ++++N R V+ +L Sbjct: 272 NRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCN 331 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + ++P V L LE+ +DVNV P K I N + + + ++ Sbjct: 332 EVYKTFNNV-QFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDI----FKTTLSDY 386 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYAT-SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 L K+M S Q + + S T+ + R +N + + Sbjct: 387 YNRQELALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHTARSESNQSNHAHFNS 446 Query: 389 YSEDNDPVEESEATHYQLGIA 409 + D +E T G Sbjct: 447 TTGVIDKSNGTELTSVMDGNY 467 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 68/388 (17%), Positives = 133/388 (34%), Gaps = 32/388 (8%) Query: 208 RISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILST 267 + D + ++ E+ + G A+ N Sbjct: 522 EFQNITSPDKARSLEKVVEEPVYFDIDGEKFQEKAVLSQADGLVFVDNECHEHTNDCCHQ 581 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 R +T + EI+P +++V P K+ R I + ++++ Sbjct: 582 ERRGSTDTEQDDE--ADSIYAEIEPVEINVRT-PLKNS---------RKSISKDNYRSLS 629 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 G++ + + + N + S ++ K QEN + D L + Sbjct: 630 D-GLTHRKFEDEILEYNLSTKNFKEISKNGKQMSSIISKRKSEAQENIIKNKDELEDFEQ 688 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ----TTDGLVIVDQHAAHERLIFEKM 443 V ++ ++ Q + +II L IVDQHA+ E+ FE + Sbjct: 689 GEKYLTLTVSKN---DFKKMEVVGQFNLGFIIVTRKVDNKSDLFIVDQHASDEKYNFETL 745 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIR 498 + T SQ L+ P+ ++L + +++++ + G K E FG + + Sbjct: 746 QAV---TVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSR-VKLL 801 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSST---TYTLQDRIENILATMACYGSIRSGRKMQSI 555 +P ++I I + +I ++ A AC SI G+ + Sbjct: 802 SLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSSIMIGKPLNKK 861 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKL 583 M R++ + + C HGRPT L Sbjct: 862 TMTRVVHNLSELDKPWNCPHGRPTMRHL 889 >gi|50552768|ref|XP_503794.1| YALI0E10769p [Yarrowia lipolytica] gi|49649663|emb|CAG79385.1| YALI0E10769p [Yarrowia lipolytica] Length = 893 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 93/376 (24%), Positives = 162/376 (43%), Gaps = 27/376 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ + I QI + +++ + A+KE++ENSLDA + VE I GK +I D+G Sbjct: 1 MAIKAIDTASIRQITSAQVVTDLNSAVKEVVENSLDANAKNVEIKIFDYGKDRVEIIDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E ++H TSKI DD +++ ++GFRGEAL SI ++ L +++ + Sbjct: 61 DGIPKSEFDHVARKHMTSKIIEFDDLASVLSYGFRGEALASICEMAELEIVTCGNTSEPA 120 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMA 176 ++ + + I S +PVA GT V +R LF + R K+ + + ++ A Sbjct: 121 TRLEFNRDGSIKSTKPVAGKRGTTVTIRRLFHSAIVRRKEFEKNAKNSHPGLIRMLETYA 180 Query: 177 IAYPKVSFTFST--IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS------ 228 I V F+ NR +G+ + + +V G + + +++N Sbjct: 181 IIRSDVRFSIVHVTNNKNRNVQLTTDGSGDMIKTVGRVFGNELKAHLMDVNFSFDVNYTK 240 Query: 229 -----------NEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + + G P F ++ +FIN R K + + Y Sbjct: 241 RGFLSSEELPNYVVRVTGLVSKPVFGMGRNANDKQLLFINKRPFTMKKLQKVFQDVYTSF 300 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS-TS 334 + L + PV+++ L+I P DVNV P K I N + N I +++ G S Sbjct: 301 VHLQK-PVLIINLDIPPSAYDVNVSPDKRTIMLHNEVDVINCIRENLVDVFESSGQSVPR 359 Query: 335 SVLSKKMISSFHQDNA 350 + K+ Q Sbjct: 360 HTVDVKVQPMSSQSYW 375 Score = 140 bits (352), Expect = 8e-31, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 89/199 (44%), Gaps = 14/199 (7%) Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 + Q ++ +II + L I+DQHA+ E+ FE++++ TKIT Q + Sbjct: 693 SRNDFLNFNIIGQFNEAFIIVSDPENLFIIDQHASDEKYNFERLQR---DTKITPQPFVN 749 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI------AIREIPAILSKKNIPQLL 513 P ++L E +++ + E L + G N++ IR P + Sbjct: 750 PLTVELTPLEESVVSSNLELLKKNGFLVTI--DNSLPPGEKCQIRGFPQTGNIVFGMPDF 807 Query: 514 RDIIDEIIDS-STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 R+++ D+ ++ ++ A+ AC GS+ G ++ EM+R++R + Sbjct: 808 RELVVLFEDNPGNDSVRPKKVRDVFASRACRGSVMVGTALKEKEMDRIVRNLAGLDKPWN 867 Query: 573 CNHGRPTFIKLKLSDIEKL 591 C HGRPT L +I+K Sbjct: 868 CPHGRPTMRHL--MEIDKW 884 >gi|19880883|gb|AAM00533.1|AF458971_6 PMS1 [Saccharomyces cerevisiae] Length = 908 Score = 231 bits (589), Expect = 3e-58, Method: Composition-based stats. Identities = 93/416 (22%), Positives = 175/416 (42%), Gaps = 39/416 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I ++++ +++I +G++I + A+KEL++NS+DA ++++E + G + +DN Sbjct: 32 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDN 91 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +H TSKI+ D + + T GFRGEAL S+ ++ L++++ Sbjct: 92 GDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKA 151 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMA 176 I+S + N GT V V LF +P R F K+ + + VI+ A Sbjct: 152 DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYA 211 Query: 177 IAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIG----------------EDFI 218 I + F+ I K + + N + + IS V G F Sbjct: 212 IINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFK 271 Query: 219 NNAVELNEK-------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIR 269 N + +I ++GY +F + ++ ++++N R V+ +L Sbjct: 272 NRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCN 331 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS-------I 322 Y + ++P V L LE+ +DVNV P K I N + + + Sbjct: 332 EVYKTFNNV-QFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDYYNRQ 390 Query: 323 QKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 + A+ K+ S S ++K + + D+ TH+ ++ E ++ Sbjct: 391 ELALPKRMCSQSEQQAQKRLKTEVVDDRSTTHVSDNENYHSSRSESNQSNHAHFNS 446 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 69/388 (17%), Positives = 134/388 (34%), Gaps = 32/388 (8%) Query: 208 RISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILST 267 + D + ++ E+ + G A+ N Sbjct: 526 EFQNITSPDKARSLEKVVEEPVYFDIDGEKFQEKAVLSQADGLVFVDNECHEHTNDCCHQ 585 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 R +T V + EI+P +++V P K+ R I + ++++ Sbjct: 586 ERRGSTDTEQDDE--VDSIYAEIEPVEINVRT-PLKNS---------RKSISKDNYRSLS 633 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 G++ + + + N + S ++ K QEN + D L + Sbjct: 634 D-GLTHRKFEDEILEYNLSTKNFKEISKNGKQMSSIISKRKSEAQENIIKNKDELEDFEQ 692 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ----TTDGLVIVDQHAAHERLIFEKM 443 V ++ ++ Q + +II L IVDQHA+ E+ FE + Sbjct: 693 GEKYLTLTVSKN---DFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETL 749 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIR 498 + T SQ L+ P+ ++L + +++++ + G K E FG + + Sbjct: 750 QAV---TVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSR-VRLL 805 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSST---TYTLQDRIENILATMACYGSIRSGRKMQSI 555 +P ++I I + +I ++ A AC SI G+ + Sbjct: 806 SLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACKSSIMIGKPLNKK 865 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKL 583 M R++ + + C HGRPT L Sbjct: 866 TMTRVVHNLSELDKPWNCPHGRPTMRHL 893 >gi|94266938|ref|ZP_01290590.1| DNA mismatch repair protein [delta proteobacterium MLMS-1] gi|93452367|gb|EAT02989.1| DNA mismatch repair protein [delta proteobacterium MLMS-1] Length = 558 Score = 231 bits (588), Expect = 3e-58, Method: Composition-based stats. Identities = 124/562 (22%), Positives = 226/562 (40%), Gaps = 81/562 (14%) Query: 110 SRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLIT 169 SRP GA + ++ + V GT VEVRDLF +PAR FLKS + E + Sbjct: 1 SRPTGAELGAMVEVAYGTVRKVSEAGAPVGTTVEVRDLFGNVPARRKFLKSARTELYHVE 60 Query: 170 DVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGE-------------- 215 + IR A+A+P + + + ++ + R++++ Sbjct: 61 ECIRNCALAFPYLGVDYQVNGRSAWQWPA--GVDDLAGRLARLFPRGEVGELLRVAGGEL 118 Query: 216 -----------DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFI 264 + + + + + ++ + G +P + + +NGR V+D+ + Sbjct: 119 AEQLLAAGRPLELLAHHLAVGDQPPAPVVAGLLPLPEAMPATGGKLRMLVNGRPVRDRLL 178 Query: 265 LSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQK 324 + A + GR P L + IDP VDVNVHP K IRFR ++ + +++ Sbjct: 179 GQAVGEALRNELARGRRPAGALFIGIDPTLVDVNVHPTKQEIRFRAQAGVQEAVRRAVTA 238 Query: 325 AINKKGISTSSVLSKK--------------------------------------MISSFH 346 A+ + Sbjct: 239 ALKTHERQRRDAFFGQPAAAQAAATSRRPPAAEQAPRQEKVTDSGLVTGPSATTAADDPG 298 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 +D P T E + E R T ++ PT + + E + Sbjct: 299 KDRRPPPTQAAGEADAQPTGEATVVGEQRRPTPVAEFAESPTVTSPAPSLAEKGERWSEE 358 Query: 407 GIA-------------CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 Q+ ++YI ++ L+ VDQHAAHERL+FEK+R+ + + Sbjct: 359 AACPTPAMVDESRPRLVGQVLKSYIFCESGGALLAVDQHAAHERLLFEKLRRQYQQQGLA 418 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 Q LL P +++L E ++ E++ RLG++ FG ++ ++ +PA+L+ +++ Sbjct: 419 CQGLLFPAVLELSPAEATVLERRAEEIARLGLEVAAFGGHSYLVKAVPALLAGAAPAEIV 478 Query: 514 RDIID-EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 ++ + + +E +LA MAC +I++G++++ EM LL EM++ S+ Sbjct: 479 AGVLAPWLAEGGRAGAAT--LEAVLAQMACKAAIKAGQRLEPAEMEGLLAEMQQAGLFSR 536 Query: 573 CNHGRPTFIKLKLSDIEKLFGR 594 C HGRP + ++EK F R Sbjct: 537 CPHGRPVVRRFAPGELEKWFHR 558 >gi|320592269|gb|EFX04708.1| DNA mismatch repair protein [Grosmannia clavigera kw1407] Length = 917 Score = 231 bits (588), Expect = 4e-58, Method: Composition-based stats. Identities = 99/430 (23%), Positives = 180/430 (41%), Gaps = 37/430 (8%) Query: 14 IAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQ 73 I +G++I KEL+ENS+DA ++ +E G ++ DNG+G++++ Sbjct: 5 IQSGQVIVNLCSVAKELVENSIDAGATSIEVRFKNQGLDSVEVQDNGYGISTQNYEGLAL 64 Query: 74 RHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSR-PPQNNTGAQIAISGE-KIS 129 +H TSK+S DD + TFGFRGEAL S+ A+SH ++++ G ++ ++ Sbjct: 65 KHYTSKLSKYDDLDTLQTFGFRGEALSSLCALSHFSVVTCLAADVPKGTRLDFETSGRLK 124 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIAYPKVSFTFST 188 VA GT V V LFF +P R ++ + E + ++ + A V FT S Sbjct: 125 GTSVVAAQKGTTVTVEKLFFNLPVRRRELERNVKREWGKVVSLLNQYACIQTGVKFTVSQ 184 Query: 189 IKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVE----------------------- 223 S ++ ST GN + + + G + + ++ Sbjct: 185 QPSKGKRVVLFSTKGNATTRDNLINIFGAKTMTSLIQLGLTMELELTRDARAKWTSPVAD 244 Query: 224 ---LNEKSNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIRTAYAETIPL 278 EI ++GY P + ++ F+NGR + Y Sbjct: 245 GGGGGGSIQEIRVEGYVSRPAHGQGRQTPDRQMFFVNGRPCKLPQFAQLFGEVYRTY-NT 303 Query: 279 GRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS-TSSVL 337 + P + +++D DVNV P K I + + + + +S+ + K+ I+ +S L Sbjct: 304 SQAPFIFADIQLDTHLYDVNVSPDKQTILLHDQGKMLDNLRESLIELFEKQEITMPTSQL 363 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 S + I++F + A + P A + + + + QE + + P+ + Sbjct: 364 SSQKITAFRKPAASQASSPSSALAEKSDRAAVGEQETQPKAKLSRTTQSPSSPPRSGHAS 423 Query: 398 ESEATHYQLG 407 + E YQLG Sbjct: 424 DDEEIVYQLG 433 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 69/186 (37%), Gaps = 30/186 (16%) Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 D L I+DQHA+ E+ FE++R +T + SQ L+ P+ + L E ++ E L Sbjct: 698 DELFIIDQHASDEKYNFERLR---ATTTLQSQRLVQPKRLSLTAVEEEVVFESRAVLAAN 754 Query: 484 GIKA-------ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS------------ 524 G E G + +P L ++I + + Sbjct: 755 GFVVDVVVDGSEPVGARC-RLLTLPLSRETTFDLGDLEELIALLAEHPGAAYADNLDCLD 813 Query: 525 -------TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 T ++ +LA AC SI GR + +M +L M C HGR Sbjct: 814 LSLSLSSTPIPRPAKVRRMLAMRACRSSIMVGRALSHRQMAAVLAHMGHMDKPWNCPHGR 873 Query: 578 PTFIKL 583 PT L Sbjct: 874 PTMRHL 879 >gi|19880897|gb|AAM00545.1|AF458973_6 PMS1 [Saccharomyces cerevisiae] Length = 908 Score = 230 bits (587), Expect = 5e-58, Method: Composition-based stats. Identities = 95/445 (21%), Positives = 175/445 (39%), Gaps = 37/445 (8%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I ++++ +++I +G++I + A+KEL++NS+DA ++++E + G + +DN Sbjct: 32 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDN 91 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +H TSKI+ D + + T GFRGEAL S+ ++ L++++ Sbjct: 92 GDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKA 151 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMA 176 I+S + N GT V V LF +P R F K+ + + VI+ A Sbjct: 152 DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYA 211 Query: 177 IAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIG----------------EDFI 218 I + F+ I K + + N + + IS V G F Sbjct: 212 IINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFK 271 Query: 219 NNAVELNEK-------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIR 269 N + +I ++GY +F + ++ ++++N R V+ +L Sbjct: 272 NRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCN 331 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + ++P V L LE+ +DVNV P K I N + + + ++ Sbjct: 332 EVYKTFNNV-QFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDI----FKTTLSDY 386 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYAT-SLTNTQEKLFLQENRLSTNDLLPSDDPT 388 L K+M S Q + S T+ + R +N + + Sbjct: 387 YNRQELALPKRMCSQSEQQAQKRLKTEVVDDRSTTHESDNENYHSARSESNQSNHAHFNS 446 Query: 389 YSEDNDPVEESEATHYQLGIACAQI 413 E V + + Sbjct: 447 TCEGTTGVIDKSNGTELTSVMDGNY 471 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 68/388 (17%), Positives = 133/388 (34%), Gaps = 32/388 (8%) Query: 208 RISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILST 267 + D + ++ E+ + G A+ N Sbjct: 526 EFQNITSPDKARSLEKVVEEPVYFDIDGEKFQEKAVLSQADGLVFVDNECHEHTNDCCHQ 585 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 R +T + EI+P +++V P K+ R I + ++++ Sbjct: 586 ERRGSTDTEQDDE--ADSIYAEIEPVEINVRT-PLKNS---------RKSISKDNYRSLS 633 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 G++ + + + N + S ++ K QEN + D L + Sbjct: 634 D-GLTHRKFEDEILEYNLSTKNFKEISKNGKQMSSIISKRKSEAQENIIKNKDELEDFEQ 692 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ----TTDGLVIVDQHAAHERLIFEKM 443 V ++ ++ Q + +II L IVDQHA+ E+ FE + Sbjct: 693 GEKYLTLTVSKN---DFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETL 749 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIR 498 + T SQ L+ P+ ++L + +++++ + G K E FG + + Sbjct: 750 QAV---TVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSR-VKLL 805 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSST---TYTLQDRIENILATMACYGSIRSGRKMQSI 555 +P ++I I + +I ++ A AC SI G+ + Sbjct: 806 SLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSSIMIGKPLNKK 865 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKL 583 M R++ + + C HGRPT L Sbjct: 866 TMTRVVHNLSELDKPWNCPHGRPTMRHL 893 >gi|19074926|ref|NP_586432.1| DNA MISMATCH REPAIR PROTEIN OF THE MUTL/HEXB FAMILY [Encephalitozoon cuniculi GB-M1] gi|19069651|emb|CAD26036.1| DNA MISMATCH REPAIR PROTEIN OF THE MUTL/HEXB FAMILY [Encephalitozoon cuniculi GB-M1] Length = 630 Score = 230 bits (587), Expect = 5e-58, Method: Composition-based stats. Identities = 113/650 (17%), Positives = 229/650 (35%), Gaps = 87/650 (13%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IRKL E + +I A ++ I +KELIEN++D+ + + ++ + DNG G Sbjct: 2 IRKLPEDVGKRIRAQRSVQSIYIVVKELIENAIDSGCTWIRILVDDA----ITVEDNGCG 57 Query: 63 MTSEEIPMAVQRHCTSKIS--------DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ 114 ++ ++ TSK S D ++GFRG+AL + V L ++SR + Sbjct: 58 IS--DLDKVGVEGATSKESMAYYVLGYADRVEKFSYGFRGQALSCLAEVCDLEIISR-SE 114 Query: 115 NNTGAQIAISGEKISSVRPVAMNPGTIVEV---------RDLFFTIPARLNFLKSEQVET 165 ++ + S I A GT V V R + + K + Sbjct: 115 HSFALRKDFSTNAI---SKCARERGTTVHVRNLFKNCPLRRPMADSGLKRDLGKICSLIE 171 Query: 166 NLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN 225 + + + K S + F+S +F + +V + + Sbjct: 172 SYRCANKINFTLFH-KRKVLLSCGGYETVREYFESNYPSFAGKCMEVCNGQMDLFMLPVC 230 Query: 226 EKSNEITLQGY---TGIPTFNRGNANQFYVFINGRTVQ------------DKFILSTIRT 270 K + + ++F +++ G I Sbjct: 231 VKEPKQLMFSERRPISNRRILNAVKSEFGLYVEGSPTFVLVIKGYGDVNVSADKSEVIFA 290 Query: 271 AYAETIPLGRYP---VVVLLLEIDPR----QVDVNVHPAKSYIRFRNPTII--------- 314 A + L R + ++P + NV ++ Sbjct: 291 DEAGILNLLRSEIGRFFSSEMYLNPASAVRRQKSNVQERSDAGEDSREDLMARGSSRISE 350 Query: 315 -RNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE 373 F+ + +++ S + + S + +T + T + L E Sbjct: 351 DFPFLKPAKTTIPHREKAQQRSAGPPEGMESSKELLPEETVGIENTKVETVSSSPLKEHE 410 Query: 374 NRLST---NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG----- 425 + T N+ + S + + E ++ + + II Q +G Sbjct: 411 SPPETEKKNEEVGSKENFAAGAYSFFRNDELVQSKISFSKGDFGRLEIIGQFNNGFIITK 470 Query: 426 --------LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 LV VDQHAA E FE +++ F K Q++++P +DL E ++ ++ Sbjct: 471 LEKNKKTYLVAVDQHAADEIRNFEDIKKTFCLKK---QSVISPVKLDLTPIEEMVVSDNV 527 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 E R G + + +P ++ + R++++++ + + + +I+ Sbjct: 528 ELFERNGFVVKDG-----MLETVPVYKNQTFGIREFRELLEDVKNEEYEF---RKARSII 579 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 A+ AC S+ G + +M R+++ + +C HGRPTF+ L ++ Sbjct: 580 ASKACRTSVMIGDVLSMADMKRIVKSLASLERPWKCPHGRPTFMVLNEAE 629 >gi|290560158|pdb|3H4L|A Chain A, Crystal Structure Of N Terminal Domain Of A Dna Repair Prote gi|290560159|pdb|3H4L|B Chain B, Crystal Structure Of N Terminal Domain Of A Dna Repair Prote Length = 367 Score = 230 bits (587), Expect = 5e-58, Method: Composition-based stats. Identities = 85/363 (23%), Positives = 159/363 (43%), Gaps = 32/363 (8%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I ++++ +++I +G++I + A+KEL++NS+DA ++++E + G + +DN Sbjct: 3 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDN 62 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +H TSKI+ D + + T GFRGEAL S+ ++ L++++ Sbjct: 63 GDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKA 122 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMA 176 I+S + N GT V V LF +P R F K+ + + VI+ A Sbjct: 123 DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYA 182 Query: 177 IAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIG----------------EDFI 218 I + F+ I K + + N + + IS V G F Sbjct: 183 IINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFK 242 Query: 219 NNAVELNEK-------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIR 269 N + +I ++GY +F + ++ ++++N R V+ +L Sbjct: 243 NRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCN 302 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y + ++P V L LE+ +DVNV P K I N + + ++ N++ Sbjct: 303 EVYKTFNNV-QFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDYYNRQ 361 Query: 330 GIS 332 ++ Sbjct: 362 ELA 364 >gi|227529691|ref|ZP_03959740.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540] gi|227350481|gb|EEJ40772.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540] Length = 160 Score = 230 bits (586), Expect = 6e-58, Method: Composition-based stats. Identities = 69/158 (43%), Positives = 104/158 (65%), Gaps = 2/158 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L+ + +QIAAGE+IERP+ +KEL+ENSLDA S R++ ++ G ++ D+G Sbjct: 3 KIHELTNVLADQIAAGEVIERPASIVKELVENSLDANSKRIDIIVENSGLDSIRVIDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ +A +RH TSKI+ D + T GFRGEALPSI +V+ +TL + P + TG+ Sbjct: 63 GIADDDVKIAFKRHATSKITTRRDLFKVRTMGFRGEALPSIASVADVTLTTATPGSTTGS 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF 157 I I G ++ ++P GT V VR+LFF PARL + Sbjct: 123 LIHIHGGELVDLKPGPARQGTDVVVRELFFNTPARLKY 160 >gi|45191022|ref|NP_985276.1| AER421Wp [Ashbya gossypii ATCC 10895] gi|44984090|gb|AAS53100.1| AER421Wp [Ashbya gossypii ATCC 10895] Length = 903 Score = 230 bits (586), Expect = 6e-58, Method: Composition-based stats. Identities = 89/420 (21%), Positives = 166/420 (39%), Gaps = 31/420 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +++ +++I +G++I A+KE++ENSLDA + ++E G + DNG Sbjct: 4 KINAINQADVHRITSGQVIIDLVAAVKEVVENSLDAHADKLEITFRNYGLEAIECADNGD 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +H TSKI +D + + TFGFRGEAL SI A++ LT+++ Sbjct: 64 GIPDSNFDSLALKHHTSKIEEFEDLTRVTTFGFRGEALASICAMASLTVITTQKGPKAHK 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAIA 178 S ++ + N GT V++R LF +P R ++ + + +++ A+ Sbjct: 124 LEYDSHGRLVKKTVTSRNKGTTVQLRHLFNNMPVRKKEFVRNFKKQFGKCVTLLQSYALL 183 Query: 179 YPKVSFTFSTIKSNRYK--MNFQSTNGNFPERISQVIGEDFINNAVELNEK--------- 227 + + + K + + + I V G D ++ ++ Sbjct: 184 SENCRLSIFNVNAAGSKSLLLSTPGRNDISKNILTVFGSDGMHGLQKVGLHLDLNEYKEK 243 Query: 228 --------------SNEITLQGYTGIPTFNRGN--ANQFYVFINGRTVQDKFILSTIRTA 271 + I + GY +F G ++ +++IN R V +L Sbjct: 244 MLKKYSEDSTLDDADHRIAVTGYISRASFGCGRSGKDRQFIYINKRPVDYPQVLKCCNDI 303 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 Y + +YPV++L E+ P+ VDVNV P K + N + + + + N++ + Sbjct: 304 YRSFNNV-QYPVIILNFELSPQFVDVNVTPDKRTVLLHNEEYVLQSLAEKLDGHFNEQEL 362 Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 L + + K + L T E L + S Sbjct: 363 MLPKSLPSLPVPHQDSELKVKRRKLVPSQELIGTFEDDHLHNTTTCSEITACSQPMEEES 422 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 14/195 (7%) Query: 400 EATHYQLGIACAQIHQNYIIS----QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 ++ Q + +II + L IVDQHA+ E+ FE ++ ST SQ Sbjct: 697 SKRDFKEMSIIGQFNLGFIIVARRAENKHDLFIVDQHASDEKYNFENLQ---KSTVFNSQ 753 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKA---ERFGPNA-IAIREIPAILSKKNIPQ 511 L+ P ++L + L++E+ + G K E + I + +P + Sbjct: 754 HLIKPLTVELSVIDELLVLENLPLFKKNGFKIRVNEAQKQGSRIELTGMPTSKQTIFDIE 813 Query: 512 LLRDIIDEIIDSS---TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 +++ + + +I ++ A AC SI G+ + M ++R++ + Sbjct: 814 DFYELLSLLKECDGVNKNSIACSKIRSMFAMRACRMSIMIGKPLTRRTMTEVVRKLSELD 873 Query: 569 NSSQCNHGRPTFIKL 583 C HGRPT L Sbjct: 874 KPWNCPHGRPTMRHL 888 >gi|324502411|gb|ADY41063.1| Mismatch repair endonuclease PMS2 [Ascaris suum] Length = 888 Score = 229 bits (585), Expect = 7e-58, Method: Composition-based stats. Identities = 96/422 (22%), Positives = 180/422 (42%), Gaps = 34/422 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I + + +I G+++ A KE+I+N+LDA ++ +E + G ++ DNG G Sbjct: 8 IAPIPADVCRRICTGQVVTTLGDACKEVIDNALDAGATTIEVRLRSFGSESMEVIDNGCG 67 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + S + + H TSK++D DF+++ T GFRGEAL ++ A+S +T+++R + Sbjct: 68 IHSSDFEALCKAHATSKLTDLSDFNHLSTIGFRGEALNALCAISSVTVITRHVDEAMATR 127 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIA 178 + I S A PGT V V LF T+P R ++ + + + V+ +A++ Sbjct: 128 LIYDHNGCIQSRESCARPPGTTVIVSKLFETLPVRRKELQRTAKKQFCKLLTVVHTLALS 187 Query: 179 YPKVSFTFST--IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--------- 227 V F S+ ++ + + E + + G NAV + Sbjct: 188 RTDVRFCVSSILDGRQHQILSTPGGSASIKEVLVSLFGARSDKNAVLDIVQRAPDNEVCS 247 Query: 228 ------------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIRTAYA 273 EI L GY A++ +++ N R VQ + Y Sbjct: 248 IYGVSAENSASTFAEIKLSGYVSSCVHGHGRSTADRQFIYFNKRPVQYPKLCRIANEVYQ 307 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 + G+Y ++VLL+++ P +DVNV P K + + + + S+ T Sbjct: 308 QY-NQGQYCMLVLLVDVPPESIDVNVAPDKRSVFYEKERELFAVVRASLLATFEPCLGQT 366 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 SV + I FHQDNA ++ + + +Q + +++ ++ + ++ Y Sbjct: 367 QSV--EAPIMRFHQDNAERSIASTSSAVVEASQS--YAEDSVVNYAPIAEDENFPYEPTQ 422 Query: 394 DP 395 Sbjct: 423 PF 424 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 21/186 (11%) Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + + Q ++ +II++ L IVDQHA+ E+ FE+++ +I SQ L+ P Sbjct: 692 DFAVMDVVGQFNKGFIITRLRGDLFIVDQHASDEKYNFERLQ---KEARIQSQLLINPRP 748 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPN-----AIAIREIPAILSKKNIPQLLRDII 517 + + E A + ++ E ++ G + RF N + +P + S + + +++ Sbjct: 749 LKIGAMEEAALRDNIEIFNQNGFEF-RFDDNGESEGRALLTSVPVLNSCQLGTSDIDEML 807 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 + D T ++ + A+ AC S+ G + + +M + C HGR Sbjct: 808 SVLADFPGTMYRPTKLRKLFASRACRKSVMIGMALSTPQMEK------------NCPHGR 855 Query: 578 PTFIKL 583 PTF +L Sbjct: 856 PTFRRL 861 >gi|47226069|emb|CAG04443.1| unnamed protein product [Tetraodon nigroviridis] Length = 866 Score = 229 bits (585), Expect = 7e-58, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 168/442 (38%), Gaps = 27/442 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G+++ + A+KEL+ENS+DA ++ ++ + G +++DNG Sbjct: 3 SIKAIDKHSVHQICSGQVVLTLATAVKELVENSIDAGATNIDVRLKDCGADLVEVSDNGK 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +H TSK+ D D ++ TFGFRGEAL S+ A+SHL++++ + G Sbjct: 63 GVEEANFEGLTLKHHTSKLRDFTDLIHVETFGFRGEALSSLCALSHLSVVTCHGSSQVGT 122 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 ++ + + P GT V ++ LF T+P R F ++ + E + +++ I Sbjct: 123 KLVFDHKGHLVLRSPHPRQQGTTVSLQQLFCTLPVRHKEFQRNIKKEYAKMIHILQSYCI 182 Query: 178 AYPKVSFTFSTIKSN--RYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE----- 230 V T S R + S + + + I + G + + + + Sbjct: 183 ISTGVRITCSNQNGQGKRSTVLSTSGSQSIRDNIGAIFGPKQLQSLLPFQQACPTENVIE 242 Query: 231 -------------ITLQGYTGI--PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + G+ R +++ + FIN R ++ + Y Sbjct: 243 EFGLSGADLPKQLFCITGFVSRGDHGAGRSASDRQFYFINNRPCDPVKVMKLVNEVYHMY 302 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS 335 +YP V L + + + ++ AK ++ ++ + ++ Sbjct: 303 -NRHQYPFVALNISVASGKQAASLRVAKRAAGSLFLSVSSLYLSSPVSSECVDVNVTPDK 361 Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 + + Y + + +++ + P +P Sbjct: 362 RQVFLQEEKLLLAALKSSLIHTYEAGVNKISLNFSSLPSAITSASEIGQPAPFRDSRTEP 421 Query: 396 VEESEATHYQLGIACAQIHQNY 417 E E ++ + A + Sbjct: 422 SAEPEPGSPRISLNLAGFKAAF 443 Score = 156 bits (395), Expect = 9e-36, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 7/209 (3%) Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S S + + +E ++ Q + +II++ + I+DQHA E+ FE + Sbjct: 657 SPGENQSAEAELKKEIRKDMFKDMEIIGQFNLGFIIAKLNSDVFIIDQHATDEKYNFEML 716 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIRE 499 +Q T + Q L+ P+ + L ++ME+ + + G + + + + Sbjct: 717 QQH---TVLQGQKLIAPQKLHLTAVSENILMENIDIFRKNGFEFQVDEDAQAMERVKLTS 773 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 +P + P + ++I + DS R+ + A+ AC S+ G + EM + Sbjct: 774 LPTSKNWTFGPADIEELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALSLTEMKK 833 Query: 560 LLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 LL M + + C HGRPT L DI Sbjct: 834 LLVHMGEMEHPWNCPHGRPTMRHLINLDI 862 >gi|324503073|gb|ADY41341.1| Mismatch repair endonuclease PMS2 [Ascaris suum] Length = 900 Score = 229 bits (585), Expect = 9e-58, Method: Composition-based stats. Identities = 96/422 (22%), Positives = 180/422 (42%), Gaps = 34/422 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I + + +I G+++ A KE+I+N+LDA ++ +E + G ++ DNG G Sbjct: 8 IAPIPADVCRRICTGQVVTTLGDACKEVIDNALDAGATTIEVRLRSFGSESMEVIDNGCG 67 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + S + + H TSK++D DF+++ T GFRGEAL ++ A+S +T+++R + Sbjct: 68 IHSSDFEALCKAHATSKLTDLSDFNHLSTIGFRGEALNALCAISSVTVITRHVDEAMATR 127 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIA 178 + I S A PGT V V LF T+P R ++ + + + V+ +A++ Sbjct: 128 LIYDHNGCIQSRESCARPPGTTVIVSKLFETLPVRRKELQRTAKKQFCKLLTVVHTLALS 187 Query: 179 YPKVSFTFST--IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--------- 227 V F S+ ++ + + E + + G NAV + Sbjct: 188 RTDVRFCVSSILDGRQHQILSTPGGSASIKEVLVSLFGARSDKNAVLDIVQRAPDNEVCS 247 Query: 228 ------------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIRTAYA 273 EI L GY A++ +++ N R VQ + Y Sbjct: 248 IYGVSAENSASTFAEIKLSGYVSSCVHGHGRSTADRQFIYFNKRPVQYPKLCRIANEVYQ 307 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 + G+Y ++VLL+++ P +DVNV P K + + + + S+ T Sbjct: 308 QY-NQGQYCMLVLLVDVPPESIDVNVAPDKRSVFYEKERELFAVVRASLLATFEPCLGQT 366 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 SV + I FHQDNA ++ + + +Q + +++ ++ + ++ Y Sbjct: 367 QSV--EAPIMRFHQDNAERSIASTSSAVVEASQS--YAEDSVVNYAPIAEDENFPYEPTQ 422 Query: 394 DP 395 Sbjct: 423 PF 424 Score = 146 bits (368), Expect = 1e-32, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 89/186 (47%), Gaps = 9/186 (4%) Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + + Q ++ +II++ L IVDQHA+ E+ FE+++ +I SQ L+ P Sbjct: 692 DFAVMDVVGQFNKGFIITRLRGDLFIVDQHASDEKYNFERLQ---KEARIQSQLLINPRP 748 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPN-----AIAIREIPAILSKKNIPQLLRDII 517 + + E A + ++ E ++ G + RF N + +P + S + + +++ Sbjct: 749 LKIGAMEEAALRDNIEIFNQNGFEF-RFDDNGESEGRALLTSVPVLNSCQLGTSDIDEML 807 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 + D T ++ + A+ AC S+ G + + +M +++R + + C HGR Sbjct: 808 SVLADFPGTMYRPTKLRKLFASRACRKSVMIGMALSTPQMEKIVRHLGALHHPWNCPHGR 867 Query: 578 PTFIKL 583 PTF +L Sbjct: 868 PTFRRL 873 >gi|313234381|emb|CBY24580.1| unnamed protein product [Oikopleura dioica] Length = 832 Score = 229 bits (584), Expect = 9e-58, Method: Composition-based stats. Identities = 91/400 (22%), Positives = 175/400 (43%), Gaps = 14/400 (3%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 MK I +L EK ++ ++ +++ ++A+KEL+EN+LDA++ ++ + G ++ D Sbjct: 1 MKRGISELDEKTVHSLSTNQVVVSLAVAVKELVENALDAKADKITVTLVDNGVELIEVKD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG G++++ RH TSK+ DD I TFGFRGEAL ++GA+S L + ++ + Sbjct: 61 NGSGISADNYDKIAMRHATSKLQEFDDLEAIGTFGFRGEALAALGAISTLKVFTKTADDE 120 Query: 117 TGAQIAISGEKISSVRPVAMNP--GTIVEVRDLFFTIPARLNFLK-SEQVETNLITDVIR 173 G+ + + + GTI+ V +LF IP R K + + E + Sbjct: 121 IGSALEFDQYGAITSHMIKAQSSNGTIIRVENLFHRIPVRRTVFKQNAKREAQRALATMM 180 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV--ELNEKSNEI 231 A+ + + + +I+ V+G V + +K+ Sbjct: 181 SYALIANARIVVTTKNGRSMKTEIQTRAGDSLKGKIASVLGGQISKEEVIEDHLQKARIF 240 Query: 232 TLQGYTGIPTF-NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 G+ R + ++ + F+NGR + F+ I + + +YPVVVL +E+ Sbjct: 241 KFNGFISKTDSGGRTSPDRQFFFVNGRPIDAPFLSRIINQEWRKVTS-KKYPVVVLNIEV 299 Query: 291 DPRQVDVNVHPAKSYIRFRNP---TIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 D VD+N+ P K + +N ++Q+I A + +S + + + + + Sbjct: 300 DQSAVDINLAPDKRTVLLQNQKHCQFRFRILLQNIWGATERDVVSMTQLSMDQFSMTLNT 359 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 ++ + L N ++E+ LP D Sbjct: 360 QSSVENSTESSVNGLINDVTFSEVEEDSNERPSKLPRLDF 399 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 90/232 (38%), Gaps = 13/232 (5%) Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 S+ +EK + + +++ + + Q ++ +II Sbjct: 596 ESIKAAKEKEERSNTIFQGREFYAKFNDQKKAEDELTRKFSKKDFTKLQVIGQFNRGFII 655 Query: 420 S---QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Q D L ++DQHA E+ FE++ S KI SQ L+ + + L GE ++ + Sbjct: 656 VTVGQLKDDLFLIDQHACDEKFNFERLM----SKKIDSQPLVIGKRMTLNPGEDQILQDK 711 Query: 477 DEDLHRLGIKAERFGPN-----AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 + G P + + +P + + + +++ +I+ Sbjct: 712 VALFKKYGFDFNFSDPECVRDVSYRMTAVPRVGKSTLGEEDVHEMLF-LINEGDFNPKPS 770 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 +I I A AC S+ G +++ +M R+L+ M C HGRPT L Sbjct: 771 KIRRINAMAACRSSVMIGEALKTYQMERMLKNMSTMDQPWNCPHGRPTMRHL 822 >gi|291534088|emb|CBL07201.1| DNA mismatch repair enzyme (predicted ATPase) [Megamonas hypermegale ART12/1] Length = 169 Score = 229 bits (584), Expect = 1e-57, Method: Composition-based stats. Identities = 75/167 (44%), Positives = 107/167 (64%), Gaps = 3/167 (1%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I L + +++IAAGE++ERP+ IKEL+ENS+DA + ++E I GG SF ++TDN Sbjct: 1 MTSIHILDDITVDKIAAGEVVERPASVIKELVENSIDAHADKIEVEILAGGTSFIRVTDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G GM + +A+ RH TSKI DD +I T GFRGEALPSI AVS L++R PQ++ Sbjct: 61 GDGMDNPNARLAILRHATSKIKQVDDLMSIDTLGFRGEALPSIAAVSRFNLITRRPQDDL 120 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVE 164 G I ++G +I + + N GT ++V DLFF +PAR ++ Sbjct: 121 GTTIKLTGGRIDEIEDMGCNIGTTIKVEDLFFNVPARKKISQNHYHR 167 >gi|295099687|emb|CBK88776.1| DNA mismatch repair enzyme (predicted ATPase) [Eubacterium cylindroides T2-87] Length = 370 Score = 229 bits (583), Expect = 1e-57, Method: Composition-based stats. Identities = 93/371 (25%), Positives = 166/371 (44%), Gaps = 28/371 (7%) Query: 250 FYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFR 309 Y+ +N R ++ I I AY+ +P R+P+VVL +E D + VDVNVHP K +R Sbjct: 1 MYITLNTRLIRSVPIQKAILDAYSHFLPPNRFPIVVLQIESDAQLVDVNVHPNKWEVRLS 60 Query: 310 NPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKL 369 + + +I+ +++ + T + K F Q+ + K + EK Sbjct: 61 KQNDLLELVKNTIRDSLS-NSLQTVQIKPKVKTPIFEQETLNFPYPIKNERKTESIIEKG 119 Query: 370 F-------------------LQENRLSTNDLLPSDDPTYSEDNDPVEESEATH------- 403 F ++E ++ L + + ++E E+ Sbjct: 120 FKKKEEYEKSYDYPIKTNPSIKEEKIEYPTELEVLTKPELQKEESIQEIESVEKAVGYEF 179 Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 + Q+ +YI+ + +GLVI+DQHAA ER +E +++ N Q L+ P + Sbjct: 180 FYHLKVIGQLKDSYILCENEEGLVIIDQHAAQERYHYEMLQETLNKPCNNLQPLMLPIQL 239 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 D+ + + +E G++ E FG + + +REIP + L D++D + + Sbjct: 240 DVSSNIMSQVNTINEKTSFFGLEFEPFGNDQLIVREIPLWFQDVHEEAFLYDLLD-LFEK 298 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + +++LATMAC+ SIR R + EM +++ +++K C HGRPT I + Sbjct: 299 DNEIDMSKLRKHVLATMACHSSIRFNRSLTMDEMKQVIEDLKKCKQPYHCPHGRPTIITM 358 Query: 584 KLSDIEKLFGR 594 D+ K F R Sbjct: 359 SDHDLRKEFER 369 >gi|303285402|ref|XP_003061991.1| DNA mismatch repair protein, MLH2/PMS1/Pms2 family [Micromonas pusilla CCMP1545] gi|226456402|gb|EEH53703.1| DNA mismatch repair protein, MLH2/PMS1/Pms2 family [Micromonas pusilla CCMP1545] Length = 345 Score = 229 bits (583), Expect = 1e-57, Method: Composition-based stats. Identities = 74/342 (21%), Positives = 145/342 (42%), Gaps = 23/342 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR ++ +++I +G+++ + A+KEL+EN+LDA ++ VE + G ++ DNG G Sbjct: 2 IRAIAPDAVHRICSGQVVLDLASAVKELVENALDAGATNVEVRVREHGVECVEVVDNGAG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ E ++ TSKI+ DD +++ +FGFRGEAL S+ A+S L + ++ ++ G++ Sbjct: 62 VSEENFAALTTKYATSKIAAFDDLASLRSFGFRGEALSSLCAMSTLVVTTKTKDDDAGSR 121 Query: 121 IAISGEKISSVRPVAMNP-GTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAIA 178 I + GT V +RD+F +P R ++ + E + +++ A+ Sbjct: 122 IEYDRSGMIVRVETVARATGTTVTLRDVFAPLPVRRKEFVRNAKREYAKLLRLLQAYAMI 181 Query: 179 YPKVSFTFSTIKSNRYKMNFQST------------NGNFPERISQVIGEDFINNAVELN- 225 V S ++ + + + ++ V G + ++ Sbjct: 182 SAGVRIVCSHQRAEGVRGGGNGGGRETVVNTRGGVHADVRSNVACVFGAKAVQGLTPVDA 241 Query: 226 --EKSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIPLG-- 279 + G G A ++ + ++NGR V + Y + Sbjct: 242 VLGADLGCRVVGLVSKAQAECGRAGGDRQFFYVNGRPVDLPKATKALNETYRAQFSVAIT 301 Query: 280 RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 R P VL + DVNV P K + + I + + Sbjct: 302 RAPFAVLDFRLPTNAYDVNVTPDKREVLLHSEKEIMAELRRV 343 >gi|164662239|ref|XP_001732241.1| hypothetical protein MGL_0016 [Malassezia globosa CBS 7966] gi|159106144|gb|EDP45027.1| hypothetical protein MGL_0016 [Malassezia globosa CBS 7966] Length = 844 Score = 229 bits (583), Expect = 1e-57, Method: Composition-based stats. Identities = 81/397 (20%), Positives = 161/397 (40%), Gaps = 19/397 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I L + +I+ +++ A+KELIEN++DA+++ +E G + +++DNG Sbjct: 8 RIAPLDLDDVRRISGAQVLPDMRAAVKELIENAMDAQATNIEVRFKDYGLTLIEVSDNGT 67 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRP-PQNNTG 118 G++ E +RHCTSK++ DD +++ T+GFRGEAL S+ V+ + +++ + G Sbjct: 68 GISKENFDALGKRHCTSKLTSFDDLTSVETYGFRGEALASLCTVARVKIITATQSEAPMG 127 Query: 119 AQIAISG--EKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRM 175 + SS + A GT V + DL ++P R K + E N +++ Sbjct: 128 TVLEFDHLGNLTSSDKRQARQRGTTVILSDLLASLPVRRRELEKHVKREYNKAHTMLQAY 187 Query: 176 AIAYPKVSF----TFSTIKSN---RYKMNFQSTNGNFPERISQVIGED---FINNAVELN 225 A+ + + + + + + ++ + G+ + + Sbjct: 188 ALISQNIRWASSIQTTVNGKPPVSQLMLRSATGPNYIQMNMAALFGKKAGAAVQSFDLNV 247 Query: 226 EKSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPV 283 G PT +G + ++ Y ++NGR + Y +YP Sbjct: 248 SLDEPAHFHGVMSKPTMGQGRSSGDRQYFYLNGRPWNCPKLAQICNQVYKMFNST-QYPC 306 Query: 284 VVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS 343 VV L I DVNV P K + + + I ++++ N + Sbjct: 307 VVANLVIGTHTYDVNVSPDKRTLYVHQEAALFDRIREALEVTFNPSHGVFTVKYPVISSP 366 Query: 344 SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTND 380 + + + + LP + + + T +L L Sbjct: 367 AVSEKHDREIELPCKSPNTSETPRELASPSRSLEIEQ 403 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 7/93 (7%) Query: 400 EATHYQLGIACAQIHQNYIISQ----TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 + Q + +II++ D L I+DQHAA E+ FE + + TKI SQ Sbjct: 723 PKKDFYTMRVVGQFNLGFIIARRDTPCMDDLFIIDQHAADEKHNFEDLERH---TKIYSQ 779 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 L+ P+ I+L + + EH E L + G + Sbjct: 780 PLVVPQRIELAPTDELVAHEHREWLSKNGFDID 812 >gi|153811375|ref|ZP_01964043.1| hypothetical protein RUMOBE_01767 [Ruminococcus obeum ATCC 29174] gi|149832502|gb|EDM87586.1| hypothetical protein RUMOBE_01767 [Ruminococcus obeum ATCC 29174] Length = 626 Score = 228 bits (582), Expect = 2e-57, Method: Composition-based stats. Identities = 91/318 (28%), Positives = 171/318 (53%), Gaps = 7/318 (2%) Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M +E+IP+A RH TSKI +D +I + GFRGEAL SI AVS + L+++ P + +G++ Sbjct: 1 MEAEQIPLAFLRHATSKIEKVEDLEHIASLGFRGEALSSIAAVSQVELITKTPSSVSGSR 60 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I G + S+ + GT VR+LF+ PAR FLKS+ E N I ++ ++A+++P Sbjct: 61 YVIEGGQEHSLEELGAPEGTTFLVRNLFYNTPARSKFLKSDMTEANYIHTLMEQLALSHP 120 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++SF + K + S N + + I V G + +E++++++ + ++G+ G P Sbjct: 121 EISFKYIQNKQVKLH---TSGNYSVKDVIYSVYGREIARALLEVSQENSFMKIEGFVGKP 177 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 RGN + +INGR V++ I I AY + ++P V L +E++ +DVNVH Sbjct: 178 EIARGNRSFENYYINGRYVKNNIITKAIENAYRGFLMQHKFPFVSLRMEMEGNDLDVNVH 237 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 PAK +RF + + + +++ A+ ++ + + + ++ + +P+ Sbjct: 238 PAKREVRFAREQEVYDAVYDTVRAALTRREMIPKVSVDSSSVKEDKEEKVTRAAVPEPFE 297 Query: 361 SLTNTQEKLFLQENRLST 378 +E+L+ + + + Sbjct: 298 Q--KRREELYGAQKPVYS 313 Score = 198 bits (504), Expect = 2e-48, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 118/286 (41%), Gaps = 3/286 (1%) Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 + ++ + + ++ + +K+ + Q K+ + T+ + Sbjct: 342 QKLDEVKKLTERQTVPESFQNSSKKTNTVPEKVDTQVKQKIVQKSVQDYEQDYVQKTEAE 401 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 + +S + + + E+ QI Y + Q D I Sbjct: 402 ELKIQEAVSRETEKQTPPQQLELFEEKLLAPESRSRIDL--IGQIFDTYWLVQFEDNFYI 459 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 +DQHAAHE++ +E+M + F I SQ L P I+ L E ++ + + G + E Sbjct: 460 IDQHAAHEKVYYERMVKQFREHSIDSQYLNPPLIVALSMQEEEVLKANMNYFEQFGFEIE 519 Query: 489 RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 FG I +P+ L +L +++D + +++ TL D LATMAC +++ Sbjct: 520 NFGGREYRISAVPSNLYGLTEEELFLEMLDNLASNNSKDTL-DIFAARLATMACKAAVKG 578 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 M E +L+ E+ N C HGRPT I + +++EK F R Sbjct: 579 NHAMSQQEAEKLIDELLTLENPYHCPHGRPTIIAMTRTELEKKFKR 624 >gi|255933019|ref|XP_002557980.1| Pc12g11630 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582599|emb|CAP80790.1| Pc12g11630 [Penicillium chrysogenum Wisconsin 54-1255] Length = 846 Score = 228 bits (582), Expect = 2e-57, Method: Composition-based stats. Identities = 86/397 (21%), Positives = 162/397 (40%), Gaps = 31/397 (7%) Query: 11 INQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 ++QI +G++I KEL+ENSLDA ++ +E G ++ DNG G++ E Sbjct: 16 VHQIQSGQVIVDLCSVAKELVENSLDAGATTIEVRFKNNGLDLIEVQDNGSGISPENYEN 75 Query: 71 AVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTGAQIAISGE- 126 +H TSK+S DD S++HTFGFRGEA+ S+ A++ +++ + ++ Sbjct: 76 VALKHYTSKLSSYDDLSSLHTFGFRGEAISSLCALADFHIVTAQEKQVPRANRLDFEQSG 135 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIAYPKVSFT 185 K+ + VA GT V +F +P R K+ + E + +++ A V F+ Sbjct: 136 KLRKTQIVAGQKGTTASVEGIFKRLPVRRRELEKNIKREYGKVLNLLHAYACISTGVRFS 195 Query: 186 FSTIKSNRYKMNFQSTNGNF--PERISQVIGEDFINNAVE----------------LNEK 227 + STNGN E I+ V G ++ + +++ Sbjct: 196 VRNTVGKTRNVVVFSTNGNKTTKENIANVYGAKTLSALISLDLDLEFEPSAATKRVGDDQ 255 Query: 228 SNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVV 285 ++I ++G+ P F R ++ F+N R I Y + + + Sbjct: 256 PSKIQVRGHISRPVFGEGRQTPDRQMFFVNSRPCGLPQIQKAFNEVYKSF-NVSQSAFIF 314 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF 345 ++D DVNV P K I + + + + ++ + + + + S Sbjct: 315 ADFQMDTGAYDVNVSPDKRQILLHDAGAMIESL----KGSLAQLFEDADQTVPQSSVKSK 370 Query: 346 H-QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 P LP + T+ ++ ++ T + Sbjct: 371 PLPKQQPLASLPGFVTARELSESGGLRSPSQDRTKES 407 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 111/304 (36%), Gaps = 34/304 (11%) Query: 310 NPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT--------- 360 +P I N + + + + + +S + Sbjct: 511 DPEEIPNIVQNAFDRMLQRLIHEAEETAMLPQENSAKRAKKMSKGAAHRDATIQLVGTVD 570 Query: 361 -SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE----ATHYQLGIACAQIHQ 415 S++ Q + + L ++ T + ++ + Q + Sbjct: 571 GSISRLQSQFITLQKTLQAGTKKTKEEATDLGEKTAEDKLSLTVSKNDFAQMRIIGQFNL 630 Query: 416 NYI----ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECA 471 +I + D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E Sbjct: 631 GFIIAVRPGEDHDELFIIDQHASDEKFNFERLQ---AETVVQNQRLVRPQRLDLTAVEEE 687 Query: 472 LIMEHDEDLHRLGIKA-------ERFGPNAIAIREIP----AILSKKNIPQLLRDIIDEI 520 +++E+ L + G E G + +P + +++ +L+ + + I Sbjct: 688 VVLENRVALEKNGFLVTVDESGDEPIGRRCQLV-SLPLSKEVVFGVRDLEELIVLLSESI 746 Query: 521 IDSST-TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 S+ + ++ + A AC SI G+ + S +M R+++ M C HGRPT Sbjct: 747 STSNELSVPRPSKVRKMFAMRACRSSIMIGKTLTSRQMERVVQNMGTIDKPWNCPHGRPT 806 Query: 580 FIKL 583 L Sbjct: 807 MRHL 810 >gi|198429273|ref|XP_002130522.1| PREDICTED: similar to Zp3a.2 protein [Ciona intestinalis] Length = 936 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 84/337 (24%), Positives = 154/337 (45%), Gaps = 16/337 (4%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 KLS + I++ ++ S +KEL EN+LDA ++ ++ + G ++ DNG G+ Sbjct: 2 HKLSSETSKLISSAQVATSVSNVVKELTENALDAGATSIQVKLVDFGLEKIEVRDNGCGI 61 Query: 64 TSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 +EE+ A QRH TSK+ D ++ T+GFRGEAL S VS + + ++ + Sbjct: 62 KAEEMKYAAQRHYTSKLRTDKDLLSLLTYGFRGEALSSACEVSDVCITTKTRYDAYSTAY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + + IS RP + GT V + ++F +P R ++ K + + L D++ A+ Sbjct: 122 TLDSKGSISLSRPSHLGQGTTVVISNIFKNLPVRKSYYANSKKRKEQLKLTEDMLIAYAL 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN--EITLQG 235 A P V + S K+ ++ + E + V+G N E ++ + + Sbjct: 182 ANPSVHLSLSHNKTVIWQ---KPACKTLSEAVVNVLGSAVSQNLEEKKVQNCEKTVAIHA 238 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET-----IPLGRYPVVVLLLEI 290 + R ++ YV IN R +Q+K I TI+ + +P +L + + Sbjct: 239 FVPKKVILRRTCDRCYVLINKRPIQEKQIDKTIKKMLGKGDSEKENNQSGWPTAILSITL 298 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 VDVNV+P K+ + + + ++ +N Sbjct: 299 PTDTVDVNVNPNKTQVMLTLKEEVLKLVENLLEPNLN 335 >gi|170574153|ref|XP_001892689.1| DNA mismatch repair protein MutL containing protein [Brugia malayi] gi|158601598|gb|EDP38475.1| DNA mismatch repair protein MutL containing protein [Brugia malayi] Length = 678 Score = 228 bits (580), Expect = 3e-57, Method: Composition-based stats. Identities = 90/415 (21%), Positives = 169/415 (40%), Gaps = 29/415 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI + + +I G+++ + A KELI+NSLDA++ +E + G ++ D+G Sbjct: 12 KIHAIPIDVCRKICTGQVVITLAGACKELIDNSLDAQAKTIEVRVRKMGFERMEVIDDGI 71 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ S + H TSK+++ DF+ + TFGFRGEAL S+ AVS L++ +R Sbjct: 72 GIHSLNFDALCKPHSTSKLTNFADFNQLTTFGFRGEALSSLCAVSSLSITTRHADEIMAT 131 Query: 120 QIAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 ++ + I S A GT + + +LF T+P R +S + + +V++ A+ Sbjct: 132 KLEFDHDGFIKSREKCARPVGTTISINNLFETLPVRRKEFERSVKKAFTKLLNVVQSFAL 191 Query: 178 AYPKVSF--TFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA-------------- 221 + V F + N + I + G F Sbjct: 192 SRTDVRFVVNSLMDGKQYQALVTPGGNAPIKDIIVSLFGARFEKGTILDIIQQEPDESIC 251 Query: 222 ----VELNEKSNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + K ++I + GY + A++ +++ N R V + Y + Sbjct: 252 SLYGISDQSKFDDIKITGYISSCVHGQGRSTADRQFIYFNKRPVDYSKLCRIANEVYQQY 311 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK--GIST 333 G+Y +++L +++ P +DVNV P K + F + + S+ ++T Sbjct: 312 -NRGQYCMLILFIDVPPESIDVNVAPDKRSVFFEREKELFALLRASLLATFAPHLGHVNT 370 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 S+ + + + T+ E F +N S D+ + D + Sbjct: 371 SNRSTNGCMDDSFIQLTQSNDNDDSSNICTSDFESSFELKNTDSLTDVTFARDKS 425 >gi|311302918|gb|ADP89033.1| PMS1-like protein [Trichomonas vaginalis] Length = 539 Score = 228 bits (580), Expect = 3e-57, Method: Composition-based stats. Identities = 122/561 (21%), Positives = 232/561 (41%), Gaps = 29/561 (5%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L + + A E I P+ A++E+IEN DA + + + GG ++DNG G+ Sbjct: 2 KTLGKHDSTMVRATETISSPAHALREMIENVFDAGCTLLTIRVGNGGLDHISVSDNGPGI 61 Query: 64 TSEEIPMAVQRHCTSK-ISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + E + M TSK D S G RG AL +I +S+LT+ + +N G ++ Sbjct: 62 SEEGLSMICDEGVTSKEFGKDVS-----GGRGRALEAISYLSYLTIDTCTDNSNNGWRLQ 116 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAIAYPK 181 + + GT V + LF+ P R ++ + + + + I ++ + AIA Sbjct: 117 FDENHTRKMEKITRPKGTTVTAQTLFYGQPVRRHYFLEHKSQQVSDIIEITQSFAIAS-S 175 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 + T + +++ + I + F + V L++ +E +L+ YT PT Sbjct: 176 ANMTVTLDNKLLIQVSTPKRDSRISTVFGSDIMKGFEHGEVSLDKWHSEASLEYYTATPT 235 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG-RYPVVVLLLEIDPRQVDVNVH 300 N +N R + I+ + + G + P V + D + Sbjct: 236 ANSNKK--ILFIVNNRPCVCSGLYRAIKNEFR--LCAGPKLPSGVFFITAPRNTFDFIPN 291 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 I F + + ++ + ++ +S L+ + S P LP+ T Sbjct: 292 SPLISISFEHEN----ILQKTFCEILSSVWKKSSEKLTFNNVISEE----PIRSLPQM-T 342 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP---VEESEATHYQLGIACAQIHQNY 417 L NT+ + +T+D+L + D + E ++ Q +Q++ Sbjct: 343 RLKNTEPLGIECHCQATTDDILERFKNCQNYVPDYGLSYDAIETKAFKDMEIIGQWNQSF 402 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 II++ + +DQHAA E FEK+R+ I SQ L++P +I E + E Sbjct: 403 IITKYGCDIYAIDQHAAMEAQNFEKLRKKC---SIQSQRLISPIVISATPQEISAAEECK 459 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 + G + N+I +++IP+I + L ++I + +S + + + + Sbjct: 460 QKCKEFGYDYD-ISDNSILVKKIPSITTVATGSDDLLELITMLHESPASQPMTRKARIWM 518 Query: 538 ATMACYGSIRSGRKMQSIEMN 558 A AC+ S+R G M + +M Sbjct: 519 AYRACHSSVRVGDTMNNSQMK 539 >gi|311302916|gb|ADP89032.1| PMS1-like protein [Trichomonas vaginalis] gi|311302920|gb|ADP89034.1| PMS1-like protein [Trichomonas vaginalis] Length = 539 Score = 228 bits (580), Expect = 3e-57, Method: Composition-based stats. Identities = 120/560 (21%), Positives = 229/560 (40%), Gaps = 27/560 (4%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L + + A E I P+ A++E+IEN DA + + + GG ++DNG G+ Sbjct: 2 KTLGKHDSTMVRATETISSPAHALREMIENVFDAGCTLLTIRVGNGGLDHISVSDNGPGI 61 Query: 64 TSEEIPMAVQRHCTSK-ISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + E + M TSK D S G RG AL +I +S+LT+ + +N G ++ Sbjct: 62 SEEGLSMICDEGVTSKEFGKDVS-----GGRGRALEAISYLSYLTIDTCTDNSNNGWRLQ 116 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAIAYPK 181 + + GT V + LF+ P R ++ + + + + I ++ + AIA Sbjct: 117 FDENHTRKMEKITRPKGTTVTAQTLFYGQPVRRHYFLEHKSQQVSDIIEITQSFAIAS-S 175 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 + T + +++ + I + F + V L++ +E +L+ YT PT Sbjct: 176 ANMTVTLDNKLLIQVSTPKRDSRISTVFGSDIMKGFEHGEVSLDKWHSEASLEYYTATPT 235 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 + +N R + I+ + + P V + D + Sbjct: 236 AHSNKK--ILFIVNNRPCVCSGLYRAIKNEFR-LCAGPKLPSGVFFITAPRNTFDFIPNS 292 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 I F + + ++ + ++ +S L+ + S P LP+ T Sbjct: 293 PLISISFEHEN----ILQKTFCEILSSVWKKSSEKLTFNNVISEE----PIRSLPQM-TR 343 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP---VEESEATHYQLGIACAQIHQNYI 418 L NT+ + +T+D+L + D + E ++ Q +Q++I Sbjct: 344 LKNTEPLGIECHCQATTDDILERFKNCQNYVPDYGLSYDAIETKAFKDMEIIGQWNQSFI 403 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 I++ + +DQHAA E FEK+R+ I SQ L++P +I E + E + Sbjct: 404 ITKYGCDIYAIDQHAAMEAQNFEKLRKKC---SIQSQRLISPIVISATPQEISAAEECKQ 460 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 G + N+I +++IP+I + L ++I + +S + + + +A Sbjct: 461 KCKEFGYDYD-ISDNSILVKKIPSITTVATGSDDLLELITMLHESPASQPMTRKARIWMA 519 Query: 539 TMACYGSIRSGRKMQSIEMN 558 AC+ S+R G M +M Sbjct: 520 YRACHSSVRVGDTMNHSQMK 539 >gi|311302914|gb|ADP89031.1| PMS1-like protein [Trichomonas vaginalis] Length = 539 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 121/561 (21%), Positives = 231/561 (41%), Gaps = 29/561 (5%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L + + A E I P+ A++E+IEN DA + + + GG ++DNG G+ Sbjct: 2 KTLGKHDSTMVRATETISSPAHALREMIENVFDAGCTLLTIRVGNGGLDHISVSDNGPGI 61 Query: 64 TSEEIPMAVQRHCTSK-ISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + E + M TSK D S G RG AL +I +S+LT+ + +N G ++ Sbjct: 62 SEEGLSMICDEGVTSKEFGKDVS-----GGRGRALEAISYLSYLTIDTCTDNSNNGWRLQ 116 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAIAYPK 181 + + GT V + LF+ P R ++ + + + + I ++ + AIA Sbjct: 117 FDENHTRKMEKITRPKGTTVTAQTLFYGQPVRRHYFLEHKSQQVSDIIEITQSFAIAS-S 175 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 + T + +++ + I + F + V L++ E +L+ YT PT Sbjct: 176 ANMTVTLDNKLLIQVSTPKRDSRISTVFGSDIMKGFEHGEVSLDKWHPEASLEYYTATPT 235 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG-RYPVVVLLLEIDPRQVDVNVH 300 N +N R + I+ + + G + P V + D + Sbjct: 236 ANSNKK--ILFIVNNRPCVCSGLYRAIKNEFR--LCAGPKLPSGVFFITAPRNTFDFIPN 291 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 I F + + ++ + ++ +S L+ + S P LP+ T Sbjct: 292 SPLISISFEHEN----ILQKTFCEILSSVWKKSSEKLTFNNVISEE----PIRSLPQM-T 342 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP---VEESEATHYQLGIACAQIHQNY 417 L NT+ + +T+D+L + D + E ++ Q +Q++ Sbjct: 343 RLKNTEPLGIECHCQATTDDILERFKNCQNYVPDYGLSYDAIETKAFKDMEIIGQWNQSF 402 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 II++ + +DQHAA E FEK+R+ I SQ L++P +I E + + Sbjct: 403 IITKYGCDIYAIDQHAAMEAQNFEKLRKKC---SIQSQRLISPIVISATPQEISAAEDCK 459 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 + G + N+I +++IP+I + L ++I + +S + + + + Sbjct: 460 QKCKEFGYDYD-ISDNSILVKKIPSITTVATGSDDLLELITMLHESPASQPMTRKARIWM 518 Query: 538 ATMACYGSIRSGRKMQSIEMN 558 A AC+ S+R G M + +M Sbjct: 519 AYRACHSSVRVGDTMNNSQMK 539 >gi|322707643|gb|EFY99221.1| putative DNA mismatch repair protein PMS1 [Metarhizium anisopliae ARSEF 23] Length = 1106 Score = 227 bits (578), Expect = 5e-57, Method: Composition-based stats. Identities = 92/438 (21%), Positives = 176/438 (40%), Gaps = 29/438 (6%) Query: 16 AGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +G++I +KEL+ENS+DA ++ ++ G ++ DNG G+ P +H Sbjct: 90 SGQVIVDLCSVVKELVENSIDAGATIIDVRFKNQGLDLIEVQDNGSGICPANYPSIALKH 149 Query: 76 CTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTGAQIAISGE-KISSV 131 TSK+S D +++ TFGFRGEAL S+ A+S +T+ + G ++ K++S Sbjct: 150 HTSKLSSYSDIASLRTFGFRGEALASLCALSSVTITTCLESEVPRGCKLGFEISGKLAST 209 Query: 132 RPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 VA GT V V LF +P R ++ + E + + ++ + A + F+ S Sbjct: 210 TMVASQRGTTVSVEKLFHNLPVRRRELERNIKREWHKVIALLNQYACVQTNLKFSVSQQP 269 Query: 191 SNRYKMNFQSTNGN--FPERISQVIGEDFINN-----------------AVELNEKSNEI 231 + ++ ST N E I + G ++ + +++S ++ Sbjct: 270 TKGKRIILFSTKSNPTTRENIINIFGSKAMSTLVSLDLLLEMHPSNVGPDLRTDQESKQV 329 Query: 232 TLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 + G+ P R ++ F+NGR T Y + + P + ++ Sbjct: 330 RILGHVSRPVHGDGRQAPDRQMFFVNGRPCGLPQFAKTFNEVYKAY-NISQSPFIFADVQ 388 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--ISTSSVLSKKMISSFHQ 347 +D + DVNV P K I + +++ + + S+ + + + T+ VL + S Sbjct: 389 LDTKMYDVNVSPDKRSILLHDQSLLLDRLRSSLIRLFDSHDYQLPTTQVLITETPSCPAS 448 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 +A + +P + T E + + PS + + E G Sbjct: 449 VDADRRSIPLIRENPPYTSESELSATSHSEPDGGSPSSTGFVKGKSSQLAMREEKIASGG 508 Query: 408 IACAQIHQNYIISQTTDG 425 A+I + Sbjct: 509 REGAKIAPESLTKWFGCD 526 Score = 134 bits (338), Expect = 3e-29, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 12/178 (6%) Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 + D L I+DQHA+ E+ FE+++ +T I SQ L+ P+ + L E +++ Sbjct: 880 HTCHEADDADELFIIDQHASDEKFNFERLQV---NTVIQSQRLVYPKALQLTALEEEIVL 936 Query: 475 EHDEDLHRLGIKA--ERFGPNAI----AIREIPAILSKKNIPQLLRDIIDEIIDSSTTY- 527 + L G K + G + + + +P L ++I + + S+ Sbjct: 937 GNLPALEANGFKIQVDSTGGSPVGARCQLLALPLSREVTFTLNDLEELITLLAEESSGSR 996 Query: 528 --TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R+ + A AC SI G+ + + +M L+R M + C HGRPT L Sbjct: 997 HIPRPSRVRKMFAMRACRSSIMIGKPLTTSQMYSLVRHMGELDKPWNCPHGRPTMRHL 1054 >gi|241952218|ref|XP_002418831.1| DNA mismatch repair protein, putative; postmeiotic segregation protein, putative [Candida dubliniensis CD36] gi|223642170|emb|CAX44137.1| DNA mismatch repair protein, putative [Candida dubliniensis CD36] Length = 911 Score = 227 bits (578), Expect = 5e-57, Method: Composition-based stats. Identities = 98/422 (23%), Positives = 191/422 (45%), Gaps = 21/422 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ +++ I++I + ++I IKELIENS+DA +++++ + G QI DNG Sbjct: 7 SIKTINKFDISKITSSQVIIDLKAIIKELIENSIDAHANKIDIIFHNYGVDSIQIQDNGN 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTG 118 G+ S + R+ TSKI +D + T GFRGEAL SI ++S LT+ + ++ Sbjct: 67 GINSTDFETICLRNHTSKIENFEDLDQLTTLGFRGEALNSICSLSNKLTITT-TKEDLYP 125 Query: 119 AQIAISGEKISSVRPVAM-------NPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITD 170 ++ + + + + GT V + LF +P R NF+K+ + E + + Sbjct: 126 KCHVLNYDNMGQLVDQRIKVGGLNYKSGTSVMIEQLFKNLPVRLKNFIKNSKKEFSKAIN 185 Query: 171 VIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN---FPERISQVIGEDFINNAVELNEK 227 + I YP++ FT + +N K+ + G+ + + V G + N + L+ + Sbjct: 186 FVINYLIIYPQIKFTIYNVVNNHKKLILATKGGDNTTIIDNLISVYGNNNNKNLLSLDLE 245 Query: 228 SN-EITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 +I L GY +F R ++ ++++N R + K + I Y + +YP+ Sbjct: 246 ITEDIKLVGYISSYSFGLGRSAPDRQFLYLNKRPIIFKKLYKLINEIYKSYNHV-QYPIY 304 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 ++ + I+P VD+N+ P K+ + ++ T I I + + + + + Sbjct: 305 IIDIVINPNLVDINLLPDKTNVLIKDETTILQIIETKLSEFFELQDNMIIPKNESYQVKN 364 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 D A ++ A + + + + +N + D L D + ++D EE Sbjct: 365 SESDRAKRSDNKNIA--VHDDIDTSYQIKNDTTRLDNLSGDKANLNGNDDKQEEPNNQDE 422 Query: 405 QL 406 Q Sbjct: 423 QC 424 Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats. Identities = 63/311 (20%), Positives = 117/311 (37%), Gaps = 23/311 (7%) Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 N +P K + + I + S L + M+ + + Sbjct: 570 HQDNHGKNFYPVKHKLDDTEEENV-TVISIGDETFQQYDERRPSKRLKRDMLRNIYNKKI 628 Query: 351 PKTHLPKYATSLTN------TQEKLFLQE--NRLSTNDLLPSDDPTYSEDNDPVE-ESEA 401 + ++ N E L ++E N + TN + + + + Sbjct: 629 VNSSQEIISSINENLKTFQEQSESLDVKEEPNEIKTNAIDNLQPNKQQQYEEVESYQINK 688 Query: 402 THYQLGIACAQIHQNYII--SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 + Q + +II + L I+DQHA+ E+ FEK+ +F +I Q+L+ Sbjct: 689 QDFLKMKLIGQFNLGFIIVDFDNNNNLFIIDQHASDEKYNFEKLMTNF---RINYQSLIK 745 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFG---PNAIAIREIPA----ILSKKNIPQL 512 P ++L + L+M++ E H G K + N I + +P I + + +L Sbjct: 746 PIKLELSVIDQMLVMDNQEIFHNNGFKLKIKSTLVDNEIFLETLPVYQNIIFNLDDFYEL 805 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 L +++++ D +I+ ILA AC SI G + +M ++ + Sbjct: 806 L-NLVNQQQDQVNPNLKCSKIKQILAMKACRSSIMIGTFLSKSKMKEIISNLSTLDKPWN 864 Query: 573 CNHGRPTFIKL 583 C HGRPT L Sbjct: 865 CPHGRPTMRHL 875 >gi|255725688|ref|XP_002547773.1| predicted protein [Candida tropicalis MYA-3404] gi|240135664|gb|EER35218.1| predicted protein [Candida tropicalis MYA-3404] Length = 789 Score = 226 bits (576), Expect = 8e-57, Method: Composition-based stats. Identities = 86/365 (23%), Positives = 163/365 (44%), Gaps = 19/365 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + I+++ + ++I +KELIENS+DA + +++ G Q+ DNG Sbjct: 5 SIQSIGQADISKLTSSQVIIDLKSILKELIENSIDANADKIDITFTNYGIDSIQVQDNGK 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTG 118 G+ + R TSKI +D +N+ T GFRGEAL SI ++S LT+ + Sbjct: 65 GIQQGDFETICLRGHTSKIVNFEDLNNLSTLGFRGEALNSICSLSNKLTITT-TNGEFYP 123 Query: 119 AQIAISGEKISSVRPVAM-------NPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITD 170 + + + G V + LF+ +P R NF+K+ + E + + Sbjct: 124 KCHLLHYDNEGKLIKHDRKVGGMNYKSGCSVLIDKLFYNLPVRLKNFIKTSKREFHKAIN 183 Query: 171 VIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN---FPERISQVIGEDFINNAVELNEK 227 + I +P++ FT I + + + S G+ + + V G + N + L + Sbjct: 184 FVINYLIIFPEIKFTVYNIVNGKKNLILSSKGGDKTTIIDNLISVFGNNNNKNLLPLEIE 243 Query: 228 S-NEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 +I L G+ +F R + ++ ++++N R + K + I Y + +YP Sbjct: 244 ISEDINLSGFISSYSFGLGRSSPDRQFLYVNKRPIVFKKLSKIINEIYKSFNHV-QYPTF 302 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 ++ L I+P +DVN+ P K+ I N + + I + + + + + + S Sbjct: 303 IINLVINPNLIDVNLIPDKTNILIHNESEVLELIREKLLEFYDTQDNVIIPKNENSQLKS 362 Query: 345 FHQDN 349 F DN Sbjct: 363 FVSDN 367 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 8/189 (4%) Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 + Q + +I+ L I+DQHA+ E+ FEK+ +F I Q L+ Sbjct: 589 SKQDFLDMKLIGQFNLGFILVNHNSNLFIIDQHASDEKFNFEKLMSNFQ---IKHQPLMM 645 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA----IAIREIPAILSKKNIPQLLRD 515 P +DL + L++++ E + G K N+ I++ +P + + Sbjct: 646 PINLDLNIIDEMLVLDNQEIFNNNGFKLTINDNNSAGKRISLVSLPVYKNSMFTVDDFHE 705 Query: 516 IIDEIIDSSTTYTLQ-DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 +I+ I + L+ +I ILA AC SI G ++ +MN +++ + C Sbjct: 706 LINLINEQPNNKNLKISKIRKILAMKACRSSIMIGSSLKKSKMNEIVKNLSTLDKPWNCP 765 Query: 575 HGRPTFIKL 583 HGRPT L Sbjct: 766 HGRPTMRHL 774 >gi|50294039|ref|XP_449431.1| hypothetical protein [Candida glabrata CBS 138] gi|49528745|emb|CAG62407.1| unnamed protein product [Candida glabrata] Length = 736 Score = 226 bits (576), Expect = 8e-57, Method: Composition-based stats. Identities = 123/721 (17%), Positives = 227/721 (31%), Gaps = 145/721 (20%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVET--VIAGGGKSFFQITDNG 60 I L ++ + A I ++EL++N++DA +S V+ I K+ + D+G Sbjct: 2 IHVLPKETWQVLRADTQITGIDSVLRELLQNAVDAGASTVDVSFSIK---KNMCMVADDG 58 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNI----HTFGFRGEALPSIGAVSHLTLMSRPPQ 114 GMT +++ + + H TSKI + D T GFRGEA+ +I +S LT+M++ Sbjct: 59 CGMTRKDLDLLGRPHITSKIRNFRDLERFGNGNGTMGFRGEAIFAISQISELTMMTKHSD 118 Query: 115 NNTGA--------------------QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR 154 A + GT+V V DLF IP R Sbjct: 119 FRAHYWRDFPMTSVLTTEEDIRSSLHAQYLSTTPFYEDIWARSSGTVVIVSDLFKYIPVR 178 Query: 155 LNFLKS--EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQV 212 L++ T+ I + ++ + P + T N F + Sbjct: 179 KKTLENVPVATITDSIREDFYQILVRNPNLKLNIFTFDDNYKNFEFLNHVKEQYLHSLGS 238 Query: 213 IGEDFINNAVELNE-----------KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQD 261 I V + E + G + + +VF+NGR + Sbjct: 239 IPIHNAFIRVYGHVVPDPSIKIVKLSFREYNITGLISNCQV--RSKSFQFVFVNGRRYSN 296 Query: 262 KFILSTIRTAYAETI---------------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYI 306 L I + ++ YP+ V+ ++ D+ +K I Sbjct: 297 SEFLGKINRIFDQSTFATNAVEKDTRLGKRSARSYPLFVIKIDGPAHVQDLIQSTSKDII 356 Query: 307 RFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKK------------------MISSFHQD 348 + +I I++ I + +G T M + FH+D Sbjct: 357 HLSDGKLINILILKVIYSFLKDQGFLTEIPTQLNDDNCDRIDQLGTLEEPIFMDNDFHRD 416 Query: 349 --------NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS-DDPTYSEDNDPVEES 399 A + S +++L R S S ++ S + Sbjct: 417 FVIRNNVKMAKYNKVSHANISHPWKRQRLDYPVRRTSKWWKERSVNELHQSRISTKFAPI 476 Query: 400 EATHYQLGIACAQIHQNYIIS-------------------------QTTDGLVIVDQHAA 434 + + ++ + L I+DQHA Sbjct: 477 KKWAAYEKLHVFDYKDRFLSRSDDLKEVDVVNQVDQKFILLRQKSARGNFELYIIDQHAC 536 Query: 435 HERLIFEKMRQDFNSTKIT---SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 ER+ E + + + + + I++ E ++ + + GI Sbjct: 537 DERIRLESFLKQYICDIMANALAVQKIFQSRIEIAISEKENFEQYRHEFSKWGIYYNVVH 596 Query: 492 PN---AIAIREIPAILSK--KNIPQLLRDIIDEIID------------------------ 522 N ++ I +P +L+ K +L ++ I D Sbjct: 597 SNNNYSLDIFALPDMLADKIKANEELKDMMLQHIFDLKDGSRSRIKTISSLDAQFLSGGW 656 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 S + I + AC +I G + E L+R + + C HGRP+ ++ Sbjct: 657 WSNVNKIPSFIRRFFDSKACRSAIMFGDTLNLQECRDLVRRLNGCIQPNFCAHGRPSVVE 716 Query: 583 L 583 L Sbjct: 717 L 717 >gi|260946133|ref|XP_002617364.1| hypothetical protein CLUG_02808 [Clavispora lusitaniae ATCC 42720] gi|238849218|gb|EEQ38682.1| hypothetical protein CLUG_02808 [Clavispora lusitaniae ATCC 42720] Length = 878 Score = 226 bits (576), Expect = 8e-57, Method: Composition-based stats. Identities = 88/386 (22%), Positives = 165/386 (42%), Gaps = 33/386 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I + + +I +G++I +KEL+ENS+DAES +++ V G + +++DNG Sbjct: 1 MGIGSIQTSDVAKITSGQVIIELLSVVKELVENSIDAESDKIDVVFNNNGITSVEVSDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NT 117 G+ E+ +H TSK++ +D S + T GFRGEA+ S+ V+ + +++ + Sbjct: 61 TGIEKEDFESLCLKHHTSKLTTFEDLSRVSTLGFRGEAMSSLCNVAKVKIVTCSKSSYPK 120 Query: 118 GAQIAISGEK--ISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRR 174 ++ ++ V GT V V LF +P R NF+K + E + + Sbjct: 121 ATELEYDSMGKLVAQKSKVTGKKGTTVLVSGLFQDMPVRQKNFIKHAKREYSKCLSTLMS 180 Query: 175 MAIAYPKVSFTFSTI----KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE 230 +AYP + F I + Q + + + ++ + G + V ++ +++ Sbjct: 181 YLLAYPHIRFAVYNINATSGKKTLTLGSQGGSSSVTDVLTSIFGSNGAYGLVSIDVAASD 240 Query: 231 -----------------ITLQGYTGIPTFNRGN--ANQFYVFINGRTVQDKFILSTIRTA 271 + + G+ +F G ++ Y+ IN R V K I Sbjct: 241 IDVRFKLSANTVPVSLAMKVCGWISDYSFGMGRGGTDRQYLCINRRPVNHKRFAKVINEV 300 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 Y + PV VL +EID VDVNV P K + + I+ + + + + Sbjct: 301 YRTFNAT-QSPVYVLNIEIDSTFVDVNVTPDKRMVMINSEEILCEVLREELTYFYRDRH- 358 Query: 332 STSSVLSKKMISSFHQDNAPKTHLPK 357 +S+ + S Q + +P+ Sbjct: 359 --NSLPKNNLTSQIAQSQNMCSQIPQ 382 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 86/201 (42%), Gaps = 18/201 (8%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + + Q + +++ + L IVDQHA+ E +E++ S + +Q L Sbjct: 667 QIHKDDFARMSVVGQFNLGFVVVVHDNRLFIVDQHASDEIFNYERLM---QSLVLRAQPL 723 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKNIPQLL 513 + P +++L + +++E+ E+L R G + + + +P + L Sbjct: 724 VIPRLLELSPVDEMVLLENVENLRRNGFVVQEDADAVPGRRVKLMAVPVSKNVVFDDGDL 783 Query: 514 RDIIDEIIDSSTTYTLQ-----------DRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 +++ + ++ ++ +++ ++A+ AC SI G+ + M +++R Sbjct: 784 HELMHRLHENGFASSMSTQERPRLVVRCSKVDKMIASRACRRSIMIGQSLSKNTMAKVVR 843 Query: 563 EMEKNPNSSQCNHGRPTFIKL 583 + + C HGRPT L Sbjct: 844 HLSRLEKPWNCPHGRPTMRHL 864 >gi|238883807|gb|EEQ47445.1| conserved hypothetical protein [Candida albicans WO-1] Length = 910 Score = 226 bits (576), Expect = 8e-57, Method: Composition-based stats. Identities = 134/630 (21%), Positives = 254/630 (40%), Gaps = 77/630 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ +S+ I++I + ++I IKELIENS+DA + +++ + G + QI DNG Sbjct: 7 SIKTISKFDISKITSSQVIIDLKAIIKELIENSIDAHADKIDIIFHNYGVNSIQIQDNGN 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTG 118 G+ + R+ TSKI +D + T GFRGEAL SI ++S LT+ + ++ Sbjct: 67 GINVTDFETICLRNHTSKIENFEDLDQLTTLGFRGEALNSICSLSNKLTITT-TKEDLYP 125 Query: 119 AQIAISGEKISSVRPVAM-------NPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITD 170 ++ + + + + GT + + LF +P R NF+K+ + E + + Sbjct: 126 KCHVLNYDNMGQLVDQRIKVGGLNYKSGTSIMIEQLFKNLPVRLKNFVKNSKKEFSKAIN 185 Query: 171 VIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN---FPERISQVIGEDFINNAVELNEK 227 + I YP++ FT + +N K+ + G+ + + + G + N + L+ + Sbjct: 186 FVINYLIIYPQIKFTIYNVLNNHKKLILATKGGDNTTIIDNLISIYGNNNNKNLLSLDLE 245 Query: 228 SN-EITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 +I L GY +F R ++ ++++N R + K + I Y +YP+ Sbjct: 246 ITEDIKLVGYISSYSFGLGRSAPDRQFLYLNKRPIVFKKLYKLINEIYKSY-NHVQYPIY 304 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 ++ + I+P VD+N+ P K+ + ++ T I I + + + + + Sbjct: 305 IIDIVINPNLVDINLLPDKTNVLIKDETTILQTIETKLSEFFEVQDTMIIPKNENYQVKN 364 Query: 345 FHQDNAPKTHLPKYA------TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 + KT A TS L+ +DL +D + D D E+ Sbjct: 365 SEIEIVEKTDNKNIAVHDDIDTSYKTKINATRLEGPSEDKDDLNGNDKQEKTGDQDEQEQ 424 Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 Q + + TD D E E + + +I++ Sbjct: 425 ENDDEQQRPEVDNDVINLSEPVRKTD--KDSDNKKVSEIDNNENV-----ANQISTVNQP 477 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREI-PAILSKKNIPQLLRDII 517 + L E + E+ IK F P + P+ + K++ I+ Sbjct: 478 SNSQGVLSTNEQNEMSEN--------IKITTFEP---ILESAEPSTIENKHV------IL 520 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSG-------RKMQSIEMNRLL------REM 564 DE + ++ ++ +I ++ I+S + EMN+L E Sbjct: 521 DEPVVLESSQ--ENNNNSIFSS----HDIKSSPQNTCTADTL---EMNKLFCHQEHDEEE 571 Query: 565 EKNPNSSQCNHGR---PTFIKLKLSDIEKL 591 +K + Q NHG+ P KL S+ E + Sbjct: 572 DKCDH--QDNHGKNFYPVKHKLDDSEEENM 599 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 106/311 (34%), Gaps = 23/311 (7%) Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 N +P K + I + S L + M+ + + Sbjct: 576 HQDNHGKNFYPVKHKLDDSEEEN-MTVISIGDETFQQYDERRPSKRLKRDMLRNMYNKKI 634 Query: 351 PKTHLPKYATSLTNTQEKLFLQEN-----------RLSTNDLLPSDDPTYSEDNDPVEES 399 + ++ N Q E+ S DL + Y E Sbjct: 635 VNSSQDILSSINKNLQSPQNQSESIVIKKEPDEVKPNSVEDLQTNQQQQYEEVESYQINK 694 Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 + I + + + L I+DQHA+ E+ FEK+ S KI Q L+ Sbjct: 695 QDFLKMKLIGQFNLGFIIVDFDDNNNLFIIDQHASDEKYNFEKLM---ASFKINYQLLIK 751 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFG---PNAIAIREIPAI----LSKKNIPQL 512 P ++L + L++++ E H G K + N I + +P + + +L Sbjct: 752 PIKLELSVIDQMLVIDNQEIFHNNGFKLKINSTPVDNEILLLTLPIYQNITFNLDDFNEL 811 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 L +++ + D +I+ ILA AC SI G + +M ++ + Sbjct: 812 L-NLVSQQQDQINPNLKCSKIKKILAMKACRSSIMIGTFLSKSKMREIISNLSTLDKPWN 870 Query: 573 CNHGRPTFIKL 583 C HGRPT L Sbjct: 871 CPHGRPTMRHL 881 >gi|326436264|gb|EGD81834.1| Pms2 protein [Salpingoeca sp. ATCC 50818] Length = 934 Score = 226 bits (576), Expect = 9e-57, Method: Composition-based stats. Identities = 83/333 (24%), Positives = 158/333 (47%), Gaps = 20/333 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR++ + +++I +G+++ S+A+KE++EN LDA + + G + ++ D+G G Sbjct: 2 IRQIRREDVHRICSGQVVLSLSVALKEIVENGLDAGAKTITIKAKDYGLDYIEVADDGSG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA- 119 + ++H TSKI+ +D + TFGFRGEAL S+ AVS LT+ + + G Sbjct: 62 IEDSNFASLAKKHHTSKIAQFEDLETVGTFGFRGEALSSLCAVSELTVTTSTSSSGAGHD 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIA 178 + ++++ +P A GT V++ +LF ++P RL K ++ E + +++ + Sbjct: 122 LHYDADGELAAKKPCARERGTTVKIANLFHSLPVRLTELRKHKKREFAKLVSMLQGYCMV 181 Query: 179 YPKVSFTFST---IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI---- 231 P V F+ + + R + + + + + + + G + A+ L + EI Sbjct: 182 RPDVQFSLTHIQGNSARRLVLKTRGGDASVLDVATALFGSKTVQFAIVLTKTLTEIKTVD 241 Query: 232 ------TLQGYTGIPTFN--RGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPV 283 + GY P R + ++ + FIN R + + + AY +YP Sbjct: 242 GPLPGLKVSGYVSKPMQTLGRSSPDRQFFFINQRPCEFAKLSRAVNEAYRAY-NKNQYPF 300 Query: 284 VVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRN 316 VV L + ++VDVNV P K + F + Sbjct: 301 VVAHLHMPQQEVDVNVTPDKRTLFFHKEQALLE 333 Score = 157 bits (396), Expect = 6e-36, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 7/201 (3%) Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 + + + + + Q + +II++ L IVDQHA+ E+ FE+++Q Sbjct: 715 CSDDAEKELSTQISKDDFSDMQVIGQFNLGFIIARLHHHLFIVDQHASDEKYNFERLQQV 774 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA---ERFGPNA-IAIREIPA 502 TKI Q L+ P +DL + L++++ + G + E P + + +IP Sbjct: 775 ---TKIKRQVLIRPRPLDLPAVDENLLLDNLHIFQQNGFEFAVDEHAAPGKRVRLSQIPH 831 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 + + +++ + D + RI + A+ AC SI G+ + EM +L+ Sbjct: 832 SKGTEFGIDDIHELLFMLRDQPGVFCRPSRIRGMFASRACRSSIMIGKALTRPEMRAILQ 891 Query: 563 EMEKNPNSSQCNHGRPTFIKL 583 M C HGRPT L Sbjct: 892 HMGTMEQPWNCPHGRPTMRHL 912 >gi|156843433|ref|XP_001644784.1| hypothetical protein Kpol_1020p35 [Vanderwaltozyma polyspora DSM 70294] gi|156115434|gb|EDO16926.1| hypothetical protein Kpol_1020p35 [Vanderwaltozyma polyspora DSM 70294] Length = 957 Score = 226 bits (575), Expect = 1e-56, Method: Composition-based stats. Identities = 81/361 (22%), Positives = 157/361 (43%), Gaps = 31/361 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI L + +++I +G++I + A+KELI+NS+DA + +++ + G + +D+G Sbjct: 3 KIASLGKSDVHRITSGQVIIDLTTAVKELIDNSIDASAKQIDITLKNYGIDSIECSDDGV 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ + +H TSKIS +D S++ T GFRGEAL S+ A+S +++++ Sbjct: 63 GISVDNYESLALKHYTSKISNFEDVSSVQTLGFRGEALSSLCAISKVSVVTTTKAPRADR 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAIA 178 + N GT V V LF +P R K+ + ++I+ AI Sbjct: 123 LEYDMHGTLIGKSTTTRNKGTAVIVSQLFNNLPVRRKEFIKTSKRHFTKCINLIQSYAII 182 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK--------- 227 V FT + + ++ N + + I + G + ++ +++ + Sbjct: 183 QNDVKFTVWHVTPSGKKQQILSTLRNNSIQKNILSIFGSNSLHGLSDIDAEIDLNPYKPS 242 Query: 228 --------------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIRTA 271 +I +G +F + ++ YV+IN R ++ I Sbjct: 243 FGNKYVMDTGFEQLDYKIRAKGLISKNSFGCGRTSKDRQYVYINKRPIEYSLINKCCNEI 302 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 Y + + +YP + EI +D+N+ P K I F N + + + + K +K+ Sbjct: 303 YRQYNNV-QYPAFFIDFEISSELIDINITPDKRTILFHNERYVIDVFKEELIKYYDKQEF 361 Query: 332 S 332 S Sbjct: 362 S 362 Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats. Identities = 50/227 (22%), Positives = 95/227 (41%), Gaps = 22/227 (9%) Query: 376 LSTNDLLPSDDPTYSEDNDPVEESEAT--------HYQLGIACAQIHQNYIISQTTDG-- 425 S +D +++ T + + +EE E + Q + +II+ G Sbjct: 719 TSNHDNSHNNEETRNYKIEDIEEGEKYLTLTVNKDDFNRMEIVGQFNLGFIIATRKVGDK 778 Query: 426 --LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 L I+DQHA+ E+ FE ++ ST SQ L+ P+ ++L + L++E+ + Sbjct: 779 YDLFIIDQHASDEKYNFETLQ---KSTVFKSQKLIVPQPVELSVIDELLVIENIGIFEKN 835 Query: 484 GIKAE----RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS---STTYTLQDRIENI 536 G K E N I + +P +++ I ++ + +I ++ Sbjct: 836 GFKIEVDEDDTQGNKIKLVSLPVSKRTLFDINDFMELLHLIKNNVGIIKSDIKCTKIRSM 895 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 A AC SI G+ + M+++++ + + C HGRPT L Sbjct: 896 FAMRACRTSIMIGKPLTKKTMSKVVKHLSELHKPWNCPHGRPTMRHL 942 >gi|50305491|ref|XP_452705.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641838|emb|CAH01556.1| KLLA0C11319p [Kluyveromyces lactis] Length = 923 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 90/363 (24%), Positives = 159/363 (43%), Gaps = 31/363 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ + I++I +G++I AIKEL+ENSLDA++ ++E + G + DNG Sbjct: 1 MGIQAIENADIHKITSGQVIVDLRSAIKELLENSLDAKADKIEIIFKNYGIESIECADNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ +++ Q+H TSKIS +D S + +FGFRGEA+ S+ + + + + Sbjct: 61 VGISEDDLDNVGQKHRTSKISSFEDVSKVTSFGFRGEAIASLCQMGKVIITTTTKG-PKA 119 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 +I + + + N GT V V +LF T+P R K+ + + N D+I+ AI Sbjct: 120 YKIVFNHSGTCNKIICSRNTGTTVLVSNLFDTLPVRKKDFIKNYKRQFNRSIDLIQSYAI 179 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGED------------------- 216 V + S + + + + + V G + Sbjct: 180 IQTNVKISVSNVLPSGKKTLILSSIGKSDITRNLVSVFGSNAGKGLASIDVDLDLSNIRH 239 Query: 217 ---FINNAVELNEKSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTA 271 N E N ++ + G + +F G A ++ YV+IN R V + TI Sbjct: 240 TSILPENQKEENASEFQVKITGQISMVSFGCGRASKDRQYVYINKRPVDYPKVAKTINET 299 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 Y + +YP VL + + +D+NV P K + + + + +S+Q K+G Sbjct: 300 YQSFNNV-QYPSFVLDFRVGTKFLDLNVTPDKRTVSLHYEEYVLDALRESLQLFFQKQGF 358 Query: 332 STS 334 Sbjct: 359 VVP 361 Score = 134 bits (336), Expect = 6e-29, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 78/195 (40%), Gaps = 14/195 (7%) Query: 400 EATHYQLGIACAQIHQNYI----ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 +Q Q + +I + L IVDQHA+ E+ FE ++ +T SQ Sbjct: 717 SKNDFQNMTIVGQFNLGFIIVTRCKEGAFDLFIVDQHASDEKYNFEMLQ---KNTVFKSQ 773 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKNIPQ 511 +LL+ + ++L + L+ME+ + + G K E I + P + Sbjct: 774 SLLSLKTLELSVIDELLVMEYKDVFSKNGFKLSIDQEEEPGQRIKLVSFPVSKNTMFTEY 833 Query: 512 LLRDIIDEIIDSST---TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 ++I I + + +I ++ A AC SI G+ + M +++ + Sbjct: 834 DFHELIQLIREHEGHDMSNIRCSKIRSMFAMRACRSSIMIGKPLSMRTMKKVVNNLSDLE 893 Query: 569 NSSQCNHGRPTFIKL 583 C HGRPT L Sbjct: 894 KPWNCPHGRPTLRHL 908 >gi|170063399|ref|XP_001867088.1| DNA mismatch repair protein pms1 [Culex quinquefasciatus] gi|167881032|gb|EDS44415.1| DNA mismatch repair protein pms1 [Culex quinquefasciatus] Length = 860 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 86/348 (24%), Positives = 152/348 (43%), Gaps = 39/348 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI + +++I +G+++ +IA+KEL+ENS+DA ++ VE + G ++ DNG Sbjct: 20 KITAIDRDTVHRICSGQVVLNLAIAVKELVENSIDAGATVVEVKLKDYGAELVEVVDNGS 79 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ TSK+ + D + I TFGFRGEAL S+ A++ + +++R G Sbjct: 80 GVEQRNFEGMTAKYHTSKLREFSDLAGIETFGFRGEALSSLCALADMVIVTRHETAPHGT 139 Query: 120 QIA-ISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAI 177 ++ I+ P+A GT V + +LF T+P R F K+ + E ++ +++ + Sbjct: 140 KLELNHRGVITKRSPIARAVGTTVSLSNLFSTLPVRKKEFQKNVKKEFFKMSQILQAYCL 199 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTN--GNFPERISQVIGEDFINNAVELNEKS------- 228 V + K K ST G+ + I+ V G V+L + Sbjct: 200 VSTGVRIICTNQKKKGQKEVVMSTQGTGSVLDNITTVFGTKQAAELVQLKQAIGTNGKIL 259 Query: 229 -----------------------NEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKF 263 + T++GY R ++ + F+N R + K Sbjct: 260 DLNESDFDENISMTQEEVDSLNLSRYTIEGYISSCAHGSGRSARDRQFFFVNSRPCEPKQ 319 Query: 264 ILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNP 311 I+ + Y + P V L L++D VDVN+ P K + N Sbjct: 320 IIKLVNETYHKYNASHT-PFVFLNLKMDRADVDVNLTPDKRQLLMNNE 366 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 84/193 (43%), Gaps = 8/193 (4%) Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + + + +++ E + Q + +II++ L I+DQHA E+ FE + Sbjct: 635 NPNSNRAAEDELQMEITKEKFGKMEIIGQFNLGFIIARLDADLFIIDQHATDEKYNFEDL 694 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP----NAIAIRE 499 ++ +T + +Q L+ P+ ++L ++M+ E G + E G I + Sbjct: 695 QR---NTVLQNQKLVVPQPLELTAVNEMILMDSLEIFEMNGFQFEVDGGAEPTKKIKLVA 751 Query: 500 IPAILSKKNIPQLLRDIIDEIIDS-STTYTLQDRIENILATMACYGSIRSGRKMQSIEMN 558 P + + + + ++I + D+ T R+ ++ A+ AC S+ G+ + EM Sbjct: 752 KPFSKNWEFGKEDIDELIFMLQDAVPNTVCRPSRVRSMFASRACRKSVMIGKALTVAEMR 811 Query: 559 RLLREMEKNPNSS 571 RL+ M + Sbjct: 812 RLVTHMGEIEQPW 824 >gi|195455398|ref|XP_002074706.1| GK23208 [Drosophila willistoni] gi|194170791|gb|EDW85692.1| GK23208 [Drosophila willistoni] Length = 875 Score = 225 bits (573), Expect = 2e-56, Method: Composition-based stats. Identities = 92/417 (22%), Positives = 164/417 (39%), Gaps = 47/417 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ +++ +++I +G+++ ++A+KEL+ENS+DA ++ VE + G +++DNG G Sbjct: 18 IKAIAKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIRLKDQGLQGVEVSDNGSG 77 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + + ++ TSKI + D + TFGFRGEAL S+ A+S +T+ +R + + Sbjct: 78 VEETNLEAMTAKYHTSKIREFIDLLEVETFGFRGEALSSLCALSDMTIQTRHKSTDVAVK 137 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAIA 178 I + E KI P A GT V + +LF T+P R ++ + E N +++ + Sbjct: 138 IELDHEGKIKKRLPCARGIGTTVILSNLFSTLPVRRRDFTRNIKKEFNKTCQILQAYCLV 197 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE------------- 223 V S K + + + IS V G+ + V Sbjct: 198 SKGVRLICSNQTAKGVKSVVLQTHGVDDVLANISAVFGQRQAADLVTLKSPFEKGELSEA 257 Query: 224 ----------------------LNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTV 259 NE L+G+ R ++ + F+N R Sbjct: 258 DLRNELESSGDTTTTQFTAQDVEQLNRNEFQLEGFISSCRHGAGRSTRDRQFFFVNSRPC 317 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 K I + Y + P + L + VDVN+ P K + N I I+ Sbjct: 318 DPKNISKVMNDVYHRFNAQ-QQPFIYLNVVTARADVDVNLTPDKRQLLLNNEKI---LIL 373 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL 376 + +N G S+ + D P + + T+ +E R Sbjct: 374 ALKKSLLNTFGSMPSTFQMQNTTLVSMLDPKPAKEESQLDDTSTDIEEVPATSSQRF 430 Score = 140 bits (353), Expect = 6e-31, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 106/281 (37%), Gaps = 14/281 (4%) Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 ++ I + +++ + + + ++ A + + S + K Sbjct: 584 QDEDHIEMPKRIEFDGNSADEDETSALNVCSGELCTSLEEIAARLKAQELRQSTNRARAK 643 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 L RL + +E + +E + Q + +II + D L I Sbjct: 644 L----QRLRFKTEINPTQNVKAE-AELQKEIAKEDFARMEIIGQFNLGFIIVKLEDDLFI 698 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA- 487 VDQHAA E+ FE +++ + Q L P+ ++L ++M+H + G K Sbjct: 699 VDQHAADEKYNFETLQKCTQ---LEYQRLAVPQPLELTAINEMVLMDHLPVFEKNGFKFQ 755 Query: 488 ---ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY-TLQDRIENILATMACY 543 E + + P + + + + ++I + D+ RI + A+ AC Sbjct: 756 IDAEAPATKKVRLLGKPYSRNWEFGKEDIDELIFMLQDAPEGTICRPSRIRAMFASRACR 815 Query: 544 GSIRSGRKMQSIE-MNRLLREMEKNPNSSQCNHGRPTFIKL 583 S+ G+ + M RL+ +M + C HGRPT L Sbjct: 816 KSVMIGKALNRKTTMKRLITQMGEIEQPWNCPHGRPTMRHL 856 >gi|154338371|ref|XP_001565410.1| mismatch repair protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062459|emb|CAM42321.1| putative mismatch repair protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1368 Score = 225 bits (573), Expect = 2e-56, Method: Composition-based stats. Identities = 77/215 (35%), Positives = 118/215 (54%), Gaps = 25/215 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I KL++ +IN+IAAGE+++RPS A+KEL+ENS+DA +RV+ V A GG Q++D+G G Sbjct: 4 IHKLTDDVINRIAAGEVVQRPSAALKELLENSIDAGCNRVQVVAAEGGLEVLQVSDDGSG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSR--------- 111 + E++P+ +R+ TSK+ +D + +FGFRGEAL SI VS +T+ +R Sbjct: 64 IHKEDLPLLCERYATSKLQTFEDLHRVTSFGFRGEALASISYVSRVTVTTRRHQACDEAS 123 Query: 112 ------------PPQNNTGAQI-AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL 158 + ++G + +P A NPGT + V LF+ R L Sbjct: 124 DGAPSACAHALSTAGAAVAWRCQYLNGALLGDPQPCAGNPGTTIRVEKLFYNTLVRRRSL 183 Query: 159 KSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNR 193 + E I D++ R A+A+P V FT K+ R Sbjct: 184 R-ASEEWGRIVDIVSRYALAFPAVGFTCHREKAYR 217 Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 1/91 (1%) Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GYT PT + VFIN R V+ I I Y + G P VLLL + + Sbjct: 386 GYTSDPTLT-QRKSYLCVFINQRLVESAAIRKAIDAVYNGVLTGGNRPFTVLLLSVPTDR 444 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKA 325 VDVNVHP K + + +I + + + A Sbjct: 445 VDVNVHPTKKEVCLLDEELIVLRVAEVCRGA 475 >gi|311302922|gb|ADP89035.1| PMS1-like protein [Trichomonas vaginalis] Length = 539 Score = 225 bits (573), Expect = 2e-56, Method: Composition-based stats. Identities = 121/560 (21%), Positives = 228/560 (40%), Gaps = 27/560 (4%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L + + A E I P+ A++E+IEN DA + + + GG ++DNG G+ Sbjct: 2 KTLGKHDSTMVRATETISSPAHALREMIENVFDAGCTLLTIRVGNGGLDHISVSDNGPGI 61 Query: 64 TSEEIPMAVQRHCTSK-ISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + E + M TSK D S G RG AL +I +S+LT+ + +N G ++ Sbjct: 62 SEEGLSMICDEGVTSKEFGKDVS-----GGRGRALEAISYLSYLTIDTCTDNSNNGWRLQ 116 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAIAYPK 181 + + GT V + LF+ P R ++ + + + + I ++ + AIA Sbjct: 117 FDENHTRKMEKITRPKGTTVTAQTLFYGQPVRRHYFLEHKSQQVSDIIEITQSFAIAS-S 175 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 + T + +++ + I + F + V L++ +E +L+ YT PT Sbjct: 176 ANMTVTLDNKLLIQVSTPKRDSRISTVFGSDIMKGFEHGKVSLDKWHSEASLEYYTATPT 235 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 N +N R + I+ + + P V + D + Sbjct: 236 ANSNKK--ILFIVNNRPCVCSGLYRAIKNEFR-LCAGPKLPSGVFFITAPRNTFDFIPNS 292 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 I F + + ++ + ++ +S L+ + S P LP+ T Sbjct: 293 PLISISFEHEN----ILQKTFCEILSSVWKKSSEKLTFNNVISEE----PIRSLPQM-TR 343 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP---VEESEATHYQLGIACAQIHQNYI 418 L NT+ + +T+D+L + D + E ++ Q +Q++I Sbjct: 344 LKNTEPLGIECHCQATTDDILERFKNCQNYVPDYGLSYDAIETKAFKDMEIIGQWNQSFI 403 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 I++ + +DQHAA E FEK+R+ I SQ L++P +I E + E + Sbjct: 404 ITKYGCDIYAIDQHAAMEAQNFEKLRKKC---SIQSQRLISPIVISATPQEISAAEECKQ 460 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 G + N+I +++IP+I + L ++I + +S + + +A Sbjct: 461 KCKEFGYDYD-ISDNSIHVKKIPSITTVATGSDDLLELITMLHESPASQPMTRNARIWMA 519 Query: 539 TMACYGSIRSGRKMQSIEMN 558 AC+ S+R G M +M Sbjct: 520 YRACHSSVRVGDTMNHSQMK 539 >gi|71027751|ref|XP_763519.1| DNA mismatch repair protein PMS1 [Theileria parva strain Muguga] gi|68350472|gb|EAN31236.1| DNA mismatch repair protein PMS1, putative [Theileria parva] Length = 791 Score = 225 bits (573), Expect = 2e-56, Method: Composition-based stats. Identities = 87/336 (25%), Positives = 153/336 (45%), Gaps = 12/336 (3%) Query: 1 MKIRKLS--EKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITD 58 M ++ L + I++ + ++I S I+EL+EN++DA+++ +E I GG ++ D Sbjct: 1 MSLQSLDHQQSCISR--SFQVITGISCVIRELVENAIDAQATNIEIKIYNGGADLIKVAD 58 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFS-NIHTFGFRGEALPSIGAVSHLTLMSRPPQN 115 NG G++ +H TSKI +D ++ TFGFRGEAL S+ + ++ + +R P + Sbjct: 59 NGTGISEINFTNLASKHSTSKIRTFEDLFTSLTTFGFRGEALYSMCNLGNVEIETRTPSS 118 Query: 116 NTGAQIAISG-EKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIR 173 + G + I+S P+A N GT V+VR+LF P R +++ + + + I+ Sbjct: 119 DNGWLLRFDSLGNITSKTPIASNIGTCVKVRELFGEYPVRRKMLIRNSKNQISKSVSQIQ 178 Query: 174 RMAIAYPKVSF---TFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE 230 + A+ P +SF T + K + N I ++ G +F V++N K E Sbjct: 179 QYALINPHISFNFTTVTNNKKFSNIFATSGSKDNVRGVIEEIFGHEFAKKLVQINIKDKE 238 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 ++G P RG Y +IN R + +A P +L L + Sbjct: 239 WRIEGLVSNPYNERGYREMEYFYINKRPISKVQKFKNAISAIFSHFSSKSKPSFILNLTM 298 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 + +DVN+ P K + I S + Sbjct: 299 NYDHIDVNISPDKRSAYIYSEDYIIRTFKVSFYAIL 334 Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 88/244 (36%), Gaps = 42/244 (17%) Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 + + E + ++ + S+ L ++DQHAA E+ FE++ Sbjct: 548 EHNFLNPQVFDEMELIGQFNKSFIITKLTFPEVKSKYNFSLYVIDQHAADEKARFERL-- 605 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA------------------ 487 + KI Q L+ P++I+L + L G Sbjct: 606 -NKTVKINKQRLIYPKLIELSPFLTQVAENSMNVLLSNGFDVRVCREKEFLVFNDEDLSM 664 Query: 488 -----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSS--------------TTYT 528 E+ G + + +P IL K D ++E+ + Sbjct: 665 TSAYTEKIGRG-VYVHTLPQILGKVLGEDDFVDFLNELSATEYVENSKQSEFIWGLGNTP 723 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL-KLSD 587 +I +ILA+ AC S+R+G + + +M ++R M + C HGRP+ L Sbjct: 724 RPHKIWSILASRACKSSVRAGDGLTNGQMKNIVRRMGTLIHPWNCPHGRPSIKCLVSHQQ 783 Query: 588 IEKL 591 +E+L Sbjct: 784 LEEL 787 >gi|229594773|ref|XP_001030203.2| DNA mismatch repair protein, C-terminal domain containing protein [Tetrahymena thermophila] gi|117556977|gb|ABK35674.1| putative mismatch repair protein [Tetrahymena thermophila] gi|225566596|gb|EAR82540.2| DNA mismatch repair protein, C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 946 Score = 224 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 95/426 (22%), Positives = 177/426 (41%), Gaps = 16/426 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+KL + I I ++I + +KEL+ENSLDA S+++E + GK ++ DNG G Sbjct: 2 IKKLDQSSILNICVNQVIIDLATCVKELVENSLDAGSTKIEVYLKEYGKEGVEVVDNGSG 61 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++S+ + Q+ TSK+ D ++ TFGFRGEAL +I +S LT+ ++ + + Sbjct: 62 ISSQNLEQIAQKGATSKLRQFQDLESLDTFGFRGEALNAISVLSQLTITTKTDSDEMAYR 121 Query: 121 IAISG-EKISSVRPVAMNPGTIVEVRDLFFTIPARLN-FLKSEQVETNLITDVIRRMAIA 178 + I S V GT + + DLF IP R F K+ + N + ++I AI Sbjct: 122 YQFNQDNTIKSKTLVPRERGTTISLTDLFGNIPVRKQEFNKNIISQYNKLVNMITEYAII 181 Query: 179 YPKVSFTFSTIKSNRYK---MNFQSTNGNFPERISQVIGEDFINNAVELNEKS--NEITL 233 S + + +N S N ++ +QV + + V+L + Sbjct: 182 SVNCQICLINQSSKKGREMILNSGSPMKNMLQKTAQVFSKKISDMLVDLKFDFGEECSVI 241 Query: 234 QGYT-------GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 +GY + N Y+F+N R V +++I + + + +L Sbjct: 242 EGYILNRQTSGSVQDSKSIQKNMSYLFVNTRPVNPFKKMNSIFSDIYKKYNSSARYIYIL 301 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH 346 L++ +D NV P K I + + ++ + K ++ + S Sbjct: 302 HLKVKKDAIDFNVSPDKRDIFIKYENEFYTALRDNLTQLFEKLNSIQKVLMPVVISSKIK 361 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 + + +S Q+ L Q+ + + + E++ E+SEA + + Sbjct: 362 DTSMDDSEDDSQESSNQQKQKTLSTQQTKQTKLFQKLKQEINIQEEDLSNEDSEANNQKE 421 Query: 407 GIACAQ 412 + Sbjct: 422 LEILSF 427 Score = 136 bits (343), Expect = 1e-29, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 110/307 (35%), Gaps = 15/307 (4%) Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH 346 + N +++ + + + + K + + V I Sbjct: 625 NCDDQCCTQSQNYSNSQNEYKSEDS-SLYKMKEEKQTKQLKQSLNQEELVQKHFQIQEEA 683 Query: 347 Q--DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 + + L + + Q + F +++ +DD E+ + + Sbjct: 684 RILNKKQNNELMEIDEKIDQDQGRAFKIKSKKEDEIEELADDLEEQLKTWESEDFKKDKF 743 Query: 405 QLGIACAQIHQNYIISQ--TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 Q ++ +II+ D + ++DQHA+ E+ +E++ Q L+ P Sbjct: 744 VELQIIGQFNKAFIIAYWVEKDQIFLIDQHASDEKTNYERLL---KENNFQGQKLVKPIE 800 Query: 463 IDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDII 517 + L E ++ + E + G + E G + I ++P+ + +I Sbjct: 801 LSLTIQEADILENNREIFKKNGFQFQIKYDESNGEPNLYINQLPSSKHIQFNINDFDEIF 860 Query: 518 DEI--IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 I ++ +I+ ILA+ AC SI G + M ++L + K + C H Sbjct: 861 QNINNEETDIETFRPKKIQRILASKACRSSIMIGTALNKSSMKQILLNLSKLQSPWNCPH 920 Query: 576 GRPTFIK 582 GRPT +K Sbjct: 921 GRPTMVK 927 >gi|115786267|ref|XP_797096.2| PREDICTED: similar to homolog of yeast mutL gene, partial [Strongylocentrotus purpuratus] Length = 695 Score = 224 bits (572), Expect = 3e-56, Method: Composition-based stats. Identities = 84/361 (23%), Positives = 156/361 (43%), Gaps = 47/361 (13%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 KLS + + I++ ++I + +KEL+ENSLDA + VE + G ++ DNG G+ Sbjct: 2 HKLSGETVRLISSAQVITSVASVVKELLENSLDAHADNVEIKLENCGIDKVEVRDNGDGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 +++ +RH TSK+ DD ++ T+GFRGEAL S+ AVS++T+ ++ G Sbjct: 62 QADDADFMGRRHYTSKLSNHDDLEDLITYGFRGEALGSLCAVSNVTIATKTKDEEVGRCY 121 Query: 122 AISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + E I SS +P GT V LF IP R + K + E + D++ + Sbjct: 122 TLDHEGIASSPKPSQCCTGTTVTASRLFHNIPVRKQYYSNAKRRRDELKKVEDLLLSFGV 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P V F+ S K++ ++ N N + ++G + ++ + Sbjct: 182 VCPGVRFSLSHNKASIWQKNKVP---NIRAALLNMLGSNVMSQLI--------------- 223 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP---LGRYPVVVLLLEIDPRQ 294 R ++ ++ Y++ P R+ ++ L + + Sbjct: 224 -------------------RVERNDEETQVVKQYYSQAHPKAGNVRHVIMCLAVSMPTHL 264 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVN+ P K+ + +N + IIQ +++ + K L + + + +T Sbjct: 265 VDVNLEPNKTKVLLQNNDAVICLIIQMLEE-LYKATPPVEPTLPGQSQNQPLSGASAQTA 323 Query: 355 L 355 Sbjct: 324 T 324 >gi|303391489|ref|XP_003073974.1| DNA mismatch repair protein MutL [Encephalitozoon intestinalis ATCC 50506] gi|303303123|gb|ADM12614.1| DNA mismatch repair protein MutL [Encephalitozoon intestinalis ATCC 50506] Length = 635 Score = 224 bits (572), Expect = 3e-56, Method: Composition-based stats. Identities = 121/669 (18%), Positives = 224/669 (33%), Gaps = 118/669 (17%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L E I +I A I I +KEL+ENS+D+E + + + + DNG G Sbjct: 2 IKRLPEDIGRRIKAQRSIPNTYIVVKELVENSIDSECTWIRIQVDD----SIVVEDNGCG 57 Query: 63 MTSEEIPMAVQRHCTSKISD--------DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ 114 ++ ++ TSK S D ++GFRG+AL S+ V L ++SR + Sbjct: 58 IS--DLRDVGVEGSTSKESMAYYVLGCVDRVEKPSYGFRGQALSSLSEVCDLEIISR-SE 114 Query: 115 NNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE-QVETNLITDVIR 173 + G + S V A GT V VR+LF P R + +S + + I +I Sbjct: 115 HPFGLKKDFST---GIVSRCAREKGTTVRVRNLFKNCPLRRSASESRLKKDLGRICALIE 171 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 K++FT R + E N + L Sbjct: 172 SYRCTN-KINFTLFH---KRKVLLSCGGYETPREYFESNYPSFVGKYMELCNGQVEFFML 227 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 P +F+ R + +K I + I+ + + P VL+++ Sbjct: 228 PASVREPK--------QLMFLERRPISNKRISAAIKNEFN--LYSEGIPTFVLVIKGYGD 277 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK--KGISTSSVLSKKMISSFHQD--- 348 VNV KS + F + I + + I + + S S + S + Sbjct: 278 ---VNVSTDKSEVIFSDEGGILSLLKSEIGRFFSSEVHMHSRSIPKTLGSYSPARNETED 334 Query: 349 ----------------NAPKTHLPKYATSLTNTQEKLFL-----QENRLSTNDLLPSDDP 387 + P L + A SL + K +E ++ + Sbjct: 335 NSGEGFMGSNFSGTAVHHPAVRLSRVAPSLGKRERKQNEMTEENEERSKDSSSVEEPSSG 394 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLV-----------IVDQHAAHE 436 S DN V+ S + + + Q I + L +V + Sbjct: 395 IGSLDNTEVKPSSSNLSEELEPPLEEKQQEEIYENEGHLATGAYSFFKYDELVHPKISFS 454 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIA 496 + F ++ L L + + + Sbjct: 455 KSDFNRLEIIGQFNNGFIIAKLEKNEKTYLIAVDQHAADEIRNFENI--------KKTFY 506 Query: 497 IRE----IPAILSKKNIPQLLRD----------------IID----------------EI 520 +++ +P L I +++ + +++ E+ Sbjct: 507 LKKQSVIVPVKLDLTPIEEMIVNENSEVFEKNGFVVKNGMLETIPVYRNQVFGIKEFREL 566 Query: 521 IDSSTTYTLQ-DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 ++ + +I +I+A+ AC S+ G + + +M R++R + +C HGRPT Sbjct: 567 LEDVKNEEYEFKKIRSIIASKACRTSVMIGDALSAADMKRIVRSLGVLDRPWKCPHGRPT 626 Query: 580 FIKLKLSDI 588 F+ L ++I Sbjct: 627 FMILNEAEI 635 >gi|313216746|emb|CBY37996.1| unnamed protein product [Oikopleura dioica] Length = 188 Score = 224 bits (571), Expect = 3e-56, Method: Composition-based stats. Identities = 67/176 (38%), Positives = 101/176 (57%), Gaps = 3/176 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IRKLS+ +IN+IAAGE+++RP+ AIKELIENS+DA + ++ GG F I D+G Sbjct: 1 MPIRKLSQDVINKIAAGEVVQRPANAIKELIENSIDAGAKSIKIKTKKGGLEMFSIEDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++P+A R TSK+ + D +I +FGFRGEAL SI V HLT+ S+P Sbjct: 61 CGIAMEDLPLAGVRFATSKLQEYTDLKDIGSFGFRGEALASISHVGHLTITSKPASQQVA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR 173 +++ + + P A GT+++V+DLF + R + + Sbjct: 121 YKLSFDEGQANGEAIPSAGKNGTLIQVKDLFHNMNMRQKSYNPNEEQYKKSQKYFC 176 >gi|218516329|ref|ZP_03513169.1| DNA mismatch repair protein [Rhizobium etli 8C-3] Length = 261 Score = 224 bits (571), Expect = 3e-56, Method: Composition-based stats. Identities = 119/259 (45%), Positives = 156/259 (60%), Gaps = 2/259 (0%) Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE--DNDP 395 + + +T + E+ +RLS P+ Sbjct: 2 FQPHAQRPQAPWSAETSPFRPYPPAAGFSERPQASFDRLSMPTARAELQPSPQPGAPEPA 61 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 Y LG A AQIH NYI++QT DGLVIVDQHAAHERL+FE MR+ +S ++ SQ Sbjct: 62 ASAETTGRYPLGAARAQIHANYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHSKRLASQ 121 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL PEIIDL E +C +M+H +L LG+ ERFGP AIA+RE PA+L + + L+R Sbjct: 122 VLLIPEIIDLPEEDCDRLMQHAAELSELGLAIERFGPGAIAVRETPAMLGEVDAHGLIRQ 181 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 + DEI + T L ++E + ATMAC+GS+RSGR+++ EMN LLREME P S QCNH Sbjct: 182 LADEIAEWDTASGLSAKLEYVAATMACHGSVRSGRRLRPEEMNALLREMEVTPGSGQCNH 241 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRPT+I+LKLSDIE+LFGR Sbjct: 242 GRPTYIELKLSDIERLFGR 260 >gi|195172652|ref|XP_002027110.1| GL20044 [Drosophila persimilis] gi|194112923|gb|EDW34966.1| GL20044 [Drosophila persimilis] Length = 645 Score = 224 bits (571), Expect = 3e-56, Method: Composition-based stats. Identities = 89/439 (20%), Positives = 174/439 (39%), Gaps = 53/439 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ +S+ +++I +G+++ ++A+KEL+ENS+DA ++ VE + G +++DNG Sbjct: 20 QIKAISKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKMKDQGLQGVEVSDNGS 79 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSKI + D + TFGFRGEAL S+ A+S + + +R + G Sbjct: 80 GVVEANLEAMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMAIQTRHQSTDVGL 139 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 ++ + + KI P A GT V + +LF T+P R ++ + E + +++ + Sbjct: 140 KVELDHDGKIKKRSPCARAVGTTVTLTNLFSTLPVRRRDFTRNIKKEFAKMCQILQAYCL 199 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN------ 229 V S K + + + IS + G + + V L Sbjct: 200 VTKGVRIICSNQTPKGAKTVVLQTHGAQDVLANISAIFGARQVADIVPLKSPFEKGQLSE 259 Query: 230 --------------------------------EITLQGYTGIPTF--NRGNANQFYVFIN 255 + L+GY R + ++ + F+N Sbjct: 260 VGLRAELESSADAADTTCTQFSAEDVERLNQADFRLEGYISSCRHGAGRSSRDRQFFFVN 319 Query: 256 GRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIR 315 R K I I Y + + P + L + VDVN+ P K + N Sbjct: 320 ARPCDPKNIAKVINETYHRY-NVQQQPFIYLNIITARSDVDVNLTPDKRQLLLNNER--- 375 Query: 316 NFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENR 375 I+ K + + + ++ P+ P+ A + ++EK ++ Sbjct: 376 --ILLLALKKSLLETFGQTPSTFQMQNTTIVSMLEPRPK-PQPADAGKASEEKDEEEDVP 432 Query: 376 LSTNDLLPSDDPTYSEDND 394 +S++ + D Sbjct: 433 ISSSQRFMDVLTQWRRTGD 451 >gi|322492197|emb|CBZ27471.1| putative mismatch repair protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1373 Score = 223 bits (569), Expect = 6e-56, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 116/213 (54%), Gaps = 25/213 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I KL++ +IN+IAAGE+++RPS A+KEL+EN++DA SRV+ V A GG Q+ D+G Sbjct: 3 SIHKLTDDVINRIAAGEVVQRPSAALKELLENAIDAGCSRVQVVAAEGGLEVLQVCDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSR-------- 111 G+ E++P+ +R+ TSK+ +D + +FGFRGEAL SI VS +T+ +R Sbjct: 63 GIHKEDLPLLCERYATSKLQTFEDLQRVTSFGFRGEALASISYVSRVTVTTRRRQACDES 122 Query: 112 -------------PPQNNTGAQI-AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF 157 G + ++G + +P A NPGT + V LF+ R Sbjct: 123 GDGASGAGSCSSSTAGAAVGWRCQYLNGALLEDPQPCAGNPGTTIRVEKLFYNALVRRRS 182 Query: 158 LKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 L+ E I DV+ R A+A+P + FT + Sbjct: 183 LR-ASEEWGRIADVVSRYALAFPAIGFTCYRDR 214 Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 1/91 (1%) Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GYT PT + +FIN R V+ I I Y+ + G P VLLL + + Sbjct: 386 GYTSDPTLAQRKP-YLCIFINQRLVESAAIRKAIDAVYSGVLTGGHRPFTVLLLSVPTDR 444 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKA 325 VDVNVHP K + + +I + + + + A Sbjct: 445 VDVNVHPTKKEVCLLDEELIVSRVAEVCRGA 475 >gi|156846625|ref|XP_001646199.1| hypothetical protein Kpol_1013p12 [Vanderwaltozyma polyspora DSM 70294] gi|156116873|gb|EDO18341.1| hypothetical protein Kpol_1013p12 [Vanderwaltozyma polyspora DSM 70294] Length = 753 Score = 223 bits (569), Expect = 6e-56, Method: Composition-based stats. Identities = 133/722 (18%), Positives = 258/722 (35%), Gaps = 144/722 (19%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I K+ +++ + S ++E+I+NS+DA+S+ ++ + F ++DNG Sbjct: 4 RIHKVDSEVLRLLVPQSKTISLSSTVREVIQNSVDAKSTTIKIFV-NFESHSFLVSDNGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM+ E + + TSKI+ +D N+ T+GFRGEAL +I +S LT+ S+ N+ Sbjct: 63 GMSPESLDNLGDDNVTSKITSLEDIRNVDTYGFRGEALSNISKLSQLTISSKCTAYNSTW 122 Query: 120 QIAISGEKISSVRPV--------------AMNPGTIVEVRDLFFTIPARLNFLKSEQVET 165 + V GT V V +F+ +P R N + Sbjct: 123 IKKMPLRATMLTEEVTNSDSTAFNLIPKGIYETGTSVLVETIFYNLPVRRNMALDIPKYS 182 Query: 166 NL--ITDVIRRMAIAYPK--VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA 221 + I + I +++I +P +SF + + +N N + V + + Sbjct: 183 IINDIKEEIFQISIFHPNIGISFNEVISNNTKSLLNILPANKYCEFELLTVRFRNVYQSP 242 Query: 222 VELN------EKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 V LN K E T+ G + + +V+INGR ++ + +I + Sbjct: 243 VSLNSFKRVSIKFREYTINGVISKEAVS--SKRMKFVYINGRKYSNQGLFKSIDNISQSS 300 Query: 276 IPLG-----------------RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI 318 +Y ++L + P D + K + TII I Sbjct: 301 GFGHNKDSETSPTKSSRKLYSKYMALILTISCPPSLSDCLQNSEKVIEISTHSTIIDTLI 360 Query: 319 IQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL----------------------- 355 + IQ+ + +G + +S + + +N L Sbjct: 361 TKIIQRFLRYQGYTCASNTISETDINVSYENKIHKSLLLESLSKDTLSSMFTSKSISARI 420 Query: 356 -------------------------PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT-Y 389 P NT EKL + + + L D + Y Sbjct: 421 QPNEIEGRYQNHKNVKKIHKNYSLKPTRVFKQDNTLEKLQKNISSIPGSSFLDIFDISRY 480 Query: 390 SEDNDPVEESEAT----HYQLGIACAQIHQNY-------IISQTTDGLVIVDQHAAHERL 438 + D+ ++ +E Q+ + + I ++ L+++DQHA ER+ Sbjct: 481 NGDSQNIDITEFNLDRLDLMDCKLINQLDRKFILLILPTNIKRSNPILLLIDQHACDERI 540 Query: 439 IFEKMRQDFNS---TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE-----RF 490 E+ +++ + +K + + + E E L + ++ GI+ E F Sbjct: 541 KLEEYLKEYLTSVRSKTVTTRKIKEIKFLITESENHLFEYYRKEFQYWGIEYEVCYDVEF 600 Query: 491 GPNAIAIREIPAILS---KKNIPQLLRDIIDEIID------------------------- 522 + + + ++P + K + PQ+ ++ I + Sbjct: 601 S-SYLKLIQLPDSIYDKLKIDGPQVKAALLQHIYELKDFKKFSVNKMFDDNGKDKKLDFE 659 Query: 523 -SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 + + + + AC +I G K+ E L+R++ QC HGRP+ I Sbjct: 660 WWKYIRYIPIILLELFNSRACRSAIMFGDKLDKEECRILIRQLSDCHFPFQCAHGRPSTI 719 Query: 582 KL 583 L Sbjct: 720 PL 721 >gi|115976476|ref|XP_001188203.1| PREDICTED: similar to homolog of yeast mutL gene, partial [Strongylocentrotus purpuratus] Length = 734 Score = 223 bits (569), Expect = 6e-56, Method: Composition-based stats. Identities = 84/361 (23%), Positives = 156/361 (43%), Gaps = 47/361 (13%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 KLS + + I++ ++I + +KEL+ENSLDA + VE + G ++ DNG G+ Sbjct: 2 HKLSGETVRLISSAQVITSVASVVKELLENSLDAHADNVEIKLENCGIDKVEVRDNGDGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 +++ +RH TSK+ DD ++ T+GFRGEAL S+ AVS++T+ ++ G Sbjct: 62 QADDADFMGRRHYTSKLSNHDDLEDLITYGFRGEALGSLCAVSNVTIATKTKDEEVGRCY 121 Query: 122 AISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + E I SS +P GT V LF IP R + K + E + D++ + Sbjct: 122 TLDHEGIASSPKPSQCCTGTTVTASRLFHNIPVRKQYYSNAKRRRDELKKVEDLLLSFGV 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P V F+ S K++ ++ N N + ++G + ++ + Sbjct: 182 VCPGVRFSLSHNKASIWQKNKVP---NIRAALLNMLGSNVMSQLI--------------- 223 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP---LGRYPVVVLLLEIDPRQ 294 R ++ ++ Y++ P R+ ++ L + + Sbjct: 224 -------------------RVERNDEETQVVKQYYSQAHPKAGNVRHVIMCLAVSMPTHL 264 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVN+ P K+ + +N + IIQ +++ + K L + + + +T Sbjct: 265 VDVNLEPNKTKVLLQNNDAVICLIIQMLEE-LYKATPPVEPTLPGQSQNQPLSGASAQTA 323 Query: 355 L 355 Sbjct: 324 T 324 >gi|157870217|ref|XP_001683659.1| mismatch repair protein [Leishmania major strain Friedlin] gi|68126725|emb|CAJ05022.1| putative mismatch repair protein [Leishmania major strain Friedlin] Length = 1370 Score = 223 bits (567), Expect = 1e-55, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 116/217 (53%), Gaps = 25/217 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I KL++ +IN+IAAGE+++RPS A+KEL+EN++DA SRV+ V A GG Q+ D+G Sbjct: 3 SIHKLTDDVINRIAAGEVVQRPSAALKELLENAIDAGCSRVQVVAAEGGLEVLQVCDDGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSR-------- 111 G+ E++P+ +R+ TSK+ +D + +FGFRGEAL SI VS +T+ +R Sbjct: 63 GIHKEDLPLLCERYATSKLQTFEDLHRVTSFGFRGEALASISYVSRMTVTTRRRQTCDES 122 Query: 112 -------------PPQNNTGAQI-AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF 157 + ++G + +P A NPGT V V LF+ R Sbjct: 123 GNGASGAGSCSFSTAGAAVAWRCQYLNGTLLEDPQPCAGNPGTTVRVEKLFYNALVRRRS 182 Query: 158 LKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 L+ E I DV+ R A+A+P + FT ++ Sbjct: 183 LR-ASEEWGRIVDVVSRYALAFPAIGFTCCRDRAYGC 218 Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 1/91 (1%) Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GYT PT + VFIN R V+ I I Y+ + G P VLLL + + Sbjct: 386 GYTSDPTLAQRKP-YLCVFINQRLVESAAIRKAIDAVYSGVLTGGHRPFTVLLLSVPTDR 444 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKA 325 VDVNVHP K + + +I + + + + A Sbjct: 445 VDVNVHPTKKEVCLLDEELIVSRVAEVCRGA 475 >gi|297287878|ref|XP_002808391.1| PREDICTED: LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2-like, partial [Macaca mulatta] Length = 539 Score = 222 bits (566), Expect = 1e-55, Method: Composition-based stats. Identities = 79/321 (24%), Positives = 143/321 (44%), Gaps = 13/321 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 58 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 117 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 118 V-EENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 176 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF T+P R F ++ + E + V++ I Sbjct: 177 LVFDHNGKIIQKAPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLQAYCII 236 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + + + + T G + E I V G+ + + + + ++ Sbjct: 237 SAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQVQSLIPFVQVPPSDSVCEE 296 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 G+ + + +F R + + + Y +YP VVL + +D V+ Sbjct: 297 YGLSCSDALH----NLFYCARISLEFLVSRLVNEVYHMY-NRHQYPFVVLNISVDSD-VE 350 Query: 297 VNVHPAKSYIRFRNPTIIRNF 317 V A+ R +I + Sbjct: 351 VTQQRAQGSSWQRLEGLISSI 371 Score = 123 bits (309), Expect = 9e-26, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 6/129 (4%) Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLR 514 P+ ++L A+++E+ E + G A I +P + PQ + Sbjct: 403 PQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLI-SLPTSKNWTFGPQDID 461 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 ++I + DS R++ + A+ AC S+ G + + EM +L+ M + + C Sbjct: 462 ELIFLLSDSPGVMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCP 521 Query: 575 HGRPTFIKL 583 HGRPT + Sbjct: 522 HGRPTMRHI 530 >gi|260812024|ref|XP_002600721.1| hypothetical protein BRAFLDRAFT_83463 [Branchiostoma floridae] gi|229286010|gb|EEN56733.1| hypothetical protein BRAFLDRAFT_83463 [Branchiostoma floridae] Length = 1034 Score = 222 bits (566), Expect = 1e-55, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 133/276 (48%), Gaps = 16/276 (5%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L +++ ++I +KEL+ENSLDA+++ V+ + G ++DNG G+ Sbjct: 12 QALPAATARLLSSTQVITSVFSVVKELVENSLDAQATSVDVKLESFGFDRIVVSDNGSGI 71 Query: 64 TSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + QRH TSK+S D ++ T+GFRGEAL S+ AV+ +T+ ++ ++ Sbjct: 72 SRADAEFMAQRHYTSKLSHQADLDSLETYGFRGEALGSLCAVADVTVTTKTAADDFSMIY 131 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + + KI++ +P + GT + V +LF +P R + K + E + D++ + + Sbjct: 132 TLDRQGKITNSKPAHLGQGTTITVTNLFKNVPVRRQYYSAPKRRKEELKRVEDIMMALGV 191 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFIN--NAVELNEKSNEITLQG 235 P V F+ K ++ N + + V+G ++ VE ++ +QG Sbjct: 192 IKPDVRFSLIHNKCTVWQKNKYP---DHRTALRTVLGTGTMSLLLGVEHRSLEPQVEVQG 248 Query: 236 YTGIP-----TFNRGNANQFYVFINGRTVQDKFILS 266 + P T R ++ +VF N R VQ K + Sbjct: 249 FLPKPGADPQTVTRATTDRSFVFFNERPVQMKGVEK 284 >gi|302840654|ref|XP_002951882.1| hypothetical protein VOLCADRAFT_61805 [Volvox carteri f. nagariensis] gi|300262783|gb|EFJ46987.1| hypothetical protein VOLCADRAFT_61805 [Volvox carteri f. nagariensis] Length = 369 Score = 222 bits (566), Expect = 1e-55, Method: Composition-based stats. Identities = 78/344 (22%), Positives = 152/344 (44%), Gaps = 24/344 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ ++ + I++I +G++I + AIKEL+EN+LDA ++ +E + G + ++ DNG G Sbjct: 14 IKPINRQSIHRICSGQVILDLATAIKELVENALDAGATNIEVRLREYGSAMVEVADNGRG 73 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + + ++ TSKI+ DD ++++T+GFRGEAL S+ AVS L++++R G + Sbjct: 74 VPPADYQALTLKYHTSKITSFDDLTSVNTYGFRGEALSSLCAVSELSVVTRTADQAAGVR 133 Query: 121 IAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + E ++ P GT V V++LF T+P R FL++ + + V++ A+ Sbjct: 134 LEYDHEGLLTKQSPTPRAVGTTVAVKNLFATMPVRHKEFLRNLKRDFARAVAVLQAYALI 193 Query: 179 YPKVSFTFSTI-------KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI 231 + + + + + V G +++ V I Sbjct: 194 ATHARLIVTNQAGKATARTTVFTTTAPAAELAALRDNVVAVFGGKQLHSVVVRLSPRLSI 253 Query: 232 TLQGYTGIPTFNRGNA---------NQFYVFINGRTVQDKFILSTIRTAYAETIPLGR-- 280 + P + + ++ + F+NGR V + ++ Sbjct: 254 FVLILYPSPVRSWVSRAGCGLRGDASRQFFFLNGRPVDLPKAARILNDSFKSLSSPAHAA 313 Query: 281 --YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSI 322 P+ V+ + + VDVNV P K + + + + Q I Sbjct: 314 ACRPMAVVAVNLAASDVDVNVTPDKRRVFMAAEDRLCSLLQQVI 357 >gi|124803939|ref|XP_001347855.1| DNA mismatch repair protein MLH1, putative [Plasmodium falciparum 3D7] gi|23496107|gb|AAN35768.1|AE014838_46 DNA mismatch repair protein MLH1, putative [Plasmodium falciparum 3D7] gi|29650450|gb|AAO86766.1| DNA mismatch repair enzyme [Plasmodium falciparum] Length = 1016 Score = 222 bits (566), Expect = 1e-55, Method: Composition-based stats. Identities = 86/202 (42%), Positives = 117/202 (57%), Gaps = 5/202 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I KL+E+ IN+IAAGE+I RP A+KEL+ENSLDA SS + + GG QI D+G Sbjct: 49 RIIKLAEEDINRIAAGEVIIRPCNALKELVENSLDANSSSISIHLNKGGLKSLQIIDDGD 108 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++ + +R TSKIS+ D NI TFGFRGEAL SI VS+LT+ S+ + Sbjct: 109 GIHKEDLRIVCERFTTSKISNHKDIRNIKTFGFRGEALASISHVSYLTITSKKRNSPFCY 168 Query: 120 QIAISGEKISSVRPVAM--NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 K + P GTI+ DLF+ +PARL + + E N +V+++ AI Sbjct: 169 TCNYKDGKPTQDEPTVCSGKNGTIIRFDDLFYNMPARLKTM-NPNDEYNKCLEVLQKYAI 227 Query: 178 AYPKVSFTFSTIKSNRYKMNFQ 199 YP VSFT SN +N Q Sbjct: 228 HYPNVSFTCKKWLSNTVDLNTQ 249 Score = 68.5 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 63/192 (32%), Gaps = 15/192 (7%) Query: 150 TIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKM-------NFQSTN 202 +P N + N TD + A P S + N++ Sbjct: 347 NLPHDNNITCNNLPCDNNHTD---KEATDNPDASSCMYNELEKKILEEEKYLDENYEKHL 403 Query: 203 GNFPERISQVIGEDFINN----AVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRT 258 N I +V G + ++ G PT+N FIN R Sbjct: 404 NNVRCVIQKVYGRNISKELSTIFLKEKSIPTFFKCYGLISNPTYNGKKGCYI-FFINDRL 462 Query: 259 VQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI 318 V+ I + Y+ + G YP + L L + VD+NVHP K + F I I Sbjct: 463 VESNIIKKSCENQYSNFLAKGNYPWIYLSLRLKYDIVDINVHPTKKEVHFLYQEEISMLI 522 Query: 319 IQSIQKAINKKG 330 + IQ+ + Sbjct: 523 GKKIQEFLKSFH 534 >gi|291333858|gb|ADD93540.1| DNA mismatch repair protein MutL [uncultured marine bacterium MedDCM-OCT-S04-C191] Length = 163 Score = 222 bits (565), Expect = 2e-55, Method: Composition-based stats. Identities = 62/149 (41%), Positives = 88/149 (59%), Gaps = 2/149 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 K+R L E +IN+IAAGE++ERP+ +KEL+ENSLDA + ++ + GGK + DNG Sbjct: 9 KVRILPESLINKIAAGEVVERPASVVKELVENSLDAGADQILVTLKNGGKDLISVLDNGS 68 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 GM + A++RH TSKIS +D S I T GFRGEAL +I +VS L L + ++ Sbjct: 69 GMNETDALHALERHATSKISAEEDLSRIQTLGFRGEALAAISSVSRLELTTCSNESKGAV 128 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLF 148 Q ++G + GT + V LF Sbjct: 129 QFRLNGGVLEHQGKTGFPRGTKISVEQLF 157 >gi|68068487|ref|XP_676154.1| DNA mismatch repair protein MLH1 [Plasmodium berghei strain ANKA] gi|56495716|emb|CAH97070.1| DNA mismatch repair protein MLH1, putative [Plasmodium berghei] Length = 496 Score = 222 bits (565), Expect = 2e-55, Method: Composition-based stats. Identities = 79/202 (39%), Positives = 117/202 (57%), Gaps = 5/202 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I KLS++ IN+IAAGE+I RP A+KEL+ENSLDA S+ + + GG QI D+G Sbjct: 14 RIIKLSKEDINRIAAGEVIIRPCNALKELVENSLDANSTNISVQLNKGGLKSVQIIDDGD 73 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSKIS D +I TFGFRGEAL SI VS+LT+ ++ ++++ Sbjct: 74 GIHKDDLYIVCERFTTSKISSHKDIRSIKTFGFRGEALASISHVSYLTITTKKRKSSSCY 133 Query: 120 QIAISGEKISSVRPVAM--NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 K + P A GTI+ DLF+ + RL L + E N DV+++ +I Sbjct: 134 TCTYKDGKPTQKEPTACSGKDGTIIRFDDLFYNMKTRLKTL-NHNDEYNKCLDVLQKYSI 192 Query: 178 AYPKVSFTFSTIKSNRYKMNFQ 199 YP V+FT SN ++ Sbjct: 193 HYPHVTFTCKKWLSNVVDLSTY 214 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 50/135 (37%), Gaps = 4/135 (2%) Query: 203 GNFPERISQVIGEDFINNAVELNEK---SNEITLQGYTGIPTFNRGNANQFYVFINGRTV 259 N I ++ G + + + G P++N ++ FIN R V Sbjct: 285 NNTKTIIQKIYGRNVSKELIPIFVNEKIPTFFKCYGLISGPSYNSKKSSYI-FFINDRLV 343 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 + + Y + G YP V L L + VD+NVHP K + F I I Sbjct: 344 ESNILKRACENQYNNFLGKGNYPWVYLALRLKYDIVDINVHPTKKEVHFLYQDEIATLIS 403 Query: 320 QSIQKAINKKGISTS 334 + I++ + K S Sbjct: 404 KKIEEILKKINNMRS 418 >gi|198459330|ref|XP_001361342.2| GA20862 [Drosophila pseudoobscura pseudoobscura] gi|198136656|gb|EAL25920.2| GA20862 [Drosophila pseudoobscura pseudoobscura] Length = 881 Score = 222 bits (565), Expect = 2e-55, Method: Composition-based stats. Identities = 88/420 (20%), Positives = 174/420 (41%), Gaps = 48/420 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ +S+ +++I +G+++ ++A+KEL+ENS+DA ++ VE + G +++DNG Sbjct: 20 QIKAISKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKMKDQGLQGVEVSDNGS 79 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSKI + D + TFGFRGEAL S+ A+S + + +R + G Sbjct: 80 GVVEANLEAMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMAIQTRHQSTDVGL 139 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 ++ + + KI P A GT V + +LF T+P R ++ + E + +++ + Sbjct: 140 KVELDHDGKIKKRSPCARAVGTTVTLTNLFSTLPVRRRDFTRNIKKEFAKMCQILQAYCL 199 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN------ 229 V S K + + + IS + G + + V L Sbjct: 200 VTKGVRIICSNQTPKGAKTVVLQTHGAQDVLANISAIFGARQVADIVPLKSPFEKGQLSE 259 Query: 230 --------------------------------EITLQGYTGIPTF--NRGNANQFYVFIN 255 + L+GY R + ++ + F+N Sbjct: 260 VGLRAELESSADAADTTCTQFSAEDVERLNQADFRLEGYISSCRHGAGRSSRDRQFFFVN 319 Query: 256 GRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIR 315 R K I I Y + + P + L + VDVN+ P K + N I+ Sbjct: 320 ARPCDPKNIAKVINETYHRY-NVQQQPFIYLNIITARSDVDVNLTPDKRQLLLNNERILL 378 Query: 316 NFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENR 375 + +S+ + + ST + + ++S P+ A+ + +E + + ++ Sbjct: 379 LALKKSLLETFGQT-PSTFQMQNTTIVSMLEPRPKPQPEDAGKASEEKDEEEDVPISSSQ 437 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 105/253 (41%), Gaps = 13/253 (5%) Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 + ++ +T + + A SL +++ + R L + +++N +E + Sbjct: 607 QPPANYKSGELRTTIEEIADSLRKQEQQQKERRTRAKLQRLRFKSEINPNQNNKAEDELQ 666 Query: 401 ----ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 + Q + +II + D L IVDQHA+ E+ FE +++ ST++ Q Sbjct: 667 REIAKDDFARMDIIGQFNLGFIIVKLQDDLFIVDQHASDEKYNFETLQR---STQLEYQR 723 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP----NAIAIREIPAILSKKNIPQL 512 L P+ +DL ++++H + G K E + + P + + Sbjct: 724 LTVPQCLDLTAVNEMVLIDHLPVFEKNGFKFEINHEAPATKKVRLLGKPYSRQWEFGKED 783 Query: 513 LRDIIDEIIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIE-MNRLLREMEKNPNS 570 + ++I + D+ R+ ++ A+ AC S+ G + M RL+ +M + Sbjct: 784 IDELIFMLQDAPEGTICRPSRVRSMFASRACRKSVMIGTALNRTTTMRRLITQMGEIEQP 843 Query: 571 SQCNHGRPTFIKL 583 C HGRPT L Sbjct: 844 WNCPHGRPTMRHL 856 >gi|330945216|gb|EGH46889.1| DNA mismatch repair protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 162 Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 85/134 (63%), Gaps = 2/134 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G Sbjct: 22 RIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGG 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++S+++P+A+ RH TSKI D D + + GFRGEAL SI +V+ LTL SR + Sbjct: 82 GISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRDADQAW 141 Query: 120 QIAISGEKISSVRP 133 Q+ G ++ Sbjct: 142 QVETEGRDMAPRVQ 155 >gi|221056082|ref|XP_002259179.1| dna mismatch repair protein mlh1 [Plasmodium knowlesi strain H] gi|193809250|emb|CAQ39952.1| dna mismatch repair protein mlh1, putative [Plasmodium knowlesi strain H] Length = 865 Score = 221 bits (563), Expect = 3e-55, Method: Composition-based stats. Identities = 86/273 (31%), Positives = 128/273 (46%), Gaps = 5/273 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I KL+E+ IN+IAAGE+I RP A+KELIENSLDA S + + GG QI D+G Sbjct: 14 RIIKLAEEDINRIAAGEVIIRPCNALKELIENSLDANSRNISVHLNKGGLKSLQIIDDGD 73 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSKI++ D +I TFGFRGEAL SI VS+LT+ ++ Sbjct: 74 GIHKDDLKIVCERFTTSKITNHKDIRSIKTFGFRGEALSSISHVSYLTITTKKRGAPFCY 133 Query: 120 QIAISGEKISSVRPVAM--NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + K + P GTI+ DLF+ + +RL L + E N +V+++ AI Sbjct: 134 TCSYKDGKPTQEEPTICSGKDGTIIRFDDLFYNMNSRLRAL-NHNDEYNKCLEVLQKYAI 192 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 YP V+FT SN ++ Q + + E T QG Sbjct: 193 HYPHVAFTCKKWLSNTVDLSTQGVGEGIGGLGGIYVIKGKRKELFRELATMEEETPQGQI 252 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRT 270 +P + N T + + Sbjct: 253 DLPHEGNSPQTGTHTETNKETYTYTEVEKKMLE 285 Score = 67.4 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 50/135 (37%), Gaps = 4/135 (2%) Query: 203 GNFPERISQVIGEDFINNAVELNEK---SNEITLQGYTGIPTFNRGNANQFYVFINGRTV 259 N I ++ G + + K G PT+ A+ FIN R V Sbjct: 299 NNVRLTIQKIYGRNISKELSCIFIKEKIPTFFKCYGLISNPTYGGKKASYI-FFINDRLV 357 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 + + YA + G YP V L + + VD+NVHP K + F I I Sbjct: 358 ESGILKRMCENQYANFLAKGNYPWVYLSIRLKYDIVDINVHPTKKEVHFLYQEEIAMLIS 417 Query: 320 QSIQKAINKKGISTS 334 + I++ + + S Sbjct: 418 KRIEEFLKNFHNARS 432 >gi|67469317|ref|XP_650637.1| DNA mismatch repair protein PMS1 [Entamoeba histolytica HM-1:IMSS] gi|56467281|gb|EAL45250.1| DNA mismatch repair protein PMS1, putative [Entamoeba histolytica HM-1:IMSS] Length = 876 Score = 221 bits (563), Expect = 3e-55, Method: Composition-based stats. Identities = 89/408 (21%), Positives = 168/408 (41%), Gaps = 16/408 (3%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I + E+II ++++G ++ IKELIENS+D+ ++ + + G + DNG Sbjct: 3 TIHIMDEEIIQKLSSGCVVIDCESVIKELIENSIDSGATIINVKLNNYGLDSLIVEDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E + + +RHCTSKI+ ++ + + T+GFRGEAL I + + ++S G Sbjct: 63 GINEENMELLGKRHCTSKINNIEELTKVSTYGFRGEALYCISNMGEVEIIS-SDGKEVGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARL-NFLKSEQVETNLITDVIRRMAIA 178 I + V GT + V+ LF R F++++ E I +I+ A+ Sbjct: 122 SI---QLTTRIKKRVTRKQGTTIIVKKLFMNNKIRREEFMRNKNKELTKIITLIQNYALM 178 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + + + QS + E + D + + + + I + G Sbjct: 179 LTDIKMILTHQFKKTNIILLQSNGKSLKENLYNFFKGDAKDVTIPIEFEEQGIKISGIVS 238 Query: 239 IPTF-NRGNANQFYVFINGRTVQDKFILSTIRTAYA--ETIPLGRYPVVVLLLEIDPRQV 295 T R N+++ ++F+N R ++ K + I + +YP V+L + + + Sbjct: 239 NFTDKGRTNSDRIFLFVNKRPIEHKKLQQIITQQWRSLGVSFKRKYPTVILNISV--AEY 296 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 D NV P K + F + + + + I + + + S S T Sbjct: 297 DPNVSPDKRKVFFLDEDNVITLMEKCISSVWSTELLEQSIPTINNEASQCASSVIENTSP 356 Query: 356 PK-YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 K + S + ++E R T D +N+ +EE E Sbjct: 357 TKTFNLSFLPQSTQNLIKERRQKTT---THDILGTDINNEIIEEKEKP 401 Score = 106 bits (265), Expect = 9e-21, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 76/191 (39%), Gaps = 13/191 (6%) Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q ++ +II + L I+DQHAA E +E + K++ QTL++P + + + Sbjct: 686 IGQFNKGFIIGKLGYDLYIIDQHAADEIYNYETLL---KKDKLSVQTLISPLQVSMSSDD 742 Query: 470 CALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 + E+ + G + ++ + + ++ +++ ++ Sbjct: 743 EIFVQENIGLFPQFGFEVTFREDKEATQRVFLTKVYHRGKNFFGANEFSELVQQLKGCRN 802 Query: 526 TYTLQDRIENI-LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL- 583 + + ++ AT AC SI G + EM +++ + C HGR T L Sbjct: 803 DMKVIIKKKHKIFATEACRMSIMIGDSLGREEMKKIISRLVGLNKPWHCPHGRQTIRHLW 862 Query: 584 ----KLSDIEK 590 ++I K Sbjct: 863 DLRRSYNEIAK 873 >gi|169836750|ref|ZP_02869938.1| DNA mismatch repair protein mutL [candidate division TM7 single-cell isolate TM7a] Length = 174 Score = 221 bits (563), Expect = 3e-55, Method: Composition-based stats. Identities = 72/167 (43%), Positives = 104/167 (62%), Gaps = 3/167 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L EK+ N IAAGE++E P+ IKE+IENSLDA+++ ++ + G +++DNG G Sbjct: 4 IKILDEKVSNIIAAGEVVENPASMIKEMIENSLDAKATMIKIEVFKSGTD-VKVSDNGIG 62 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M ++ ++V+RH TSKI + D N+ T+GFRGEAL SI AVS LT+ +R + G + Sbjct: 63 MDKDDTLLSVERHATSKIKEKEDVFNLSTYGFRGEALSSIAAVSKLTITTRSENSPAGYR 122 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNL 167 I G + V+ N GT +EVRDLF+ PAR FL+ E Sbjct: 123 IGCYGGVVRKFEEVSRNVGTEMEVRDLFYNTPARRKFLRKMSTEYGK 169 >gi|159118777|ref|XP_001709607.1| Pms1-like protein [Giardia lamblia ATCC 50803] gi|157437724|gb|EDO81933.1| Pms1-like protein [Giardia lamblia ATCC 50803] Length = 727 Score = 221 bits (563), Expect = 3e-55, Method: Composition-based stats. Identities = 124/699 (17%), Positives = 244/699 (34%), Gaps = 123/699 (17%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR LS I A + P + L+ENSLDA +S + V+ G G + DNG Sbjct: 13 RIRSLSAGDSRLILATQQFPDPYKVVSALLENSLDAGASEIAIVLEGMGLKSITVNDNGC 72 Query: 62 GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 G+ + +++ S + +GE++ I A+S + + S + + Sbjct: 73 GLDLSTLQALGS----CRVTTATSQPGSLNRKGESIFLISALSTVLVTSSLGDDP--YER 126 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE---QVETNLITDVIRRMAIA 178 +S + S+ GT V V+DL+ +IP R + + + ITD+I+ A+A Sbjct: 127 VVSEDTSSAKHATRAGRGTTVVVQDLYRSIPVRQRYFSTPSLRKKLLLSITDLIQSYALA 186 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN-------EI 231 + F + ++ S + +R ++ G D + + ++ + Sbjct: 187 NYTLGFRLIVDGAVHIDVSSGS-KNSIHDRYVELFGRDVRSLVGFFSFETRLGYTVKASL 245 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRT-------------AYAETIPL 278 P G+A + ++ NGR + ++ ++ A +PL Sbjct: 246 ACPDAGITPQSKLGHARKIFLSTNGRPILCPSLIEALQQVYARISATNVPIGALNLVLPL 305 Query: 279 GRY------PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRN------------FIIQ 320 G Y P L ++ +D+ +++ N + I N + Sbjct: 306 GTYALARSTPYDTLQMQGLSVFIDLLSEEYLAWLLRYNKSTITNGHLGRDVTSKSLIVRA 365 Query: 321 SIQKAINKKGISTS-----------------SVLSKKMISSFHQDNAPKTHLPKYATSLT 363 + +K++N +S S +S +SF P+ ++ + T Sbjct: 366 AKEKSVNSPCPKSSFGVRSQQRDTVPDNIVISRVSHTKAASFFHTRKPELRQAYHSETNT 425 Query: 364 NTQEKL------------FLQENRLSTNDLLPSDDPTYSEDNDPVEESE----------- 400 NT+ ++ LS + D E ES+ Sbjct: 426 NTEPPPGGTPSVLGIVGFSKLQSSLSNPGPSDASDSIKVESQSCDPESKVRIGPVRRRGS 485 Query: 401 -----ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 + Q +Q+++I+Q + ++DQHAAHE F + + ++ Q Sbjct: 486 ASGFRQQDFNNLKYICQYNQSFLITQLNNTFYLIDQHAAHEAKHFSDYWHNPHCY-LSRQ 544 Query: 456 TLLTPEIIDLLEGECALIMEHDE--DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 +TP + L E + E +G + N + I P++ + + Sbjct: 545 KTITPLKLRLRPDEKLCLEEFLSSAIFDIIGFELC-LSENYVLIFSFPSLFGQTLTEEDF 603 Query: 514 RDIIDEIIDSSTTYT--------------------------LQDRIENILATMACYGSIR 547 R+ + + + + RI I A+ +C S+R Sbjct: 604 REYLLSLYGHTREHVESIICAKSTGSKPREKSLLCLLHNNIAPPRIRKIFASKSCKASVR 663 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 G + R++ ++ + C HGRP L L+ Sbjct: 664 LGDPLLDSTAKRIIADLARCEKPFNCPHGRPVLRFLDLA 702 >gi|145612427|ref|XP_367196.2| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|145019589|gb|EDK03817.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 690 Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats. Identities = 86/291 (29%), Positives = 142/291 (48%), Gaps = 14/291 (4%) Query: 54 FQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSR 111 QITDNG G+ E++P+ +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ Sbjct: 2 LQITDNGCGIEKEDLPILCERFTTSKLQTFEDLSSIATYGFRGEALASISYIAHLTVTTK 61 Query: 112 PPQNNTGAQIAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQV 163 ++ + G K++ +PVA GT + V DLF+ +P+R +S Sbjct: 62 TKDSSCAWRAYYEGGKLAPTKPGQPADPKPVAGRQGTQITVEDLFYNVPSRRRAFRSFSD 121 Query: 164 ETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE 223 E N I D++ R A+ V+F+ + + Q+ +RI Q+ G N ++ Sbjct: 122 EYNKIIDMVGRYAVHCKGVAFSCKKHGESTTSIAVQAG-ATVSDRIRQIYGSSVANELID 180 Query: 224 LNEK--SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY 281 + G+ + +FIN R V+ + ++ YA +P + Sbjct: 181 FSTSDTRWGFKASGWCTNANHS-VKKTTLLLFINNRCVESTNVKKSLEQTYAAFLPKNGH 239 Query: 282 PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 P + L LEIDP++VDVNVHP K + F N I I ++++ + S Sbjct: 240 PFLYLSLEIDPQRVDVNVHPTKREVNFLNENEIIQAICENLRTRLAAVDTS 290 >gi|156098528|ref|XP_001615296.1| DNA mismatch repair enzyme [Plasmodium vivax SaI-1] gi|148804170|gb|EDL45569.1| DNA mismatch repair enzyme, putative [Plasmodium vivax] Length = 867 Score = 220 bits (561), Expect = 5e-55, Method: Composition-based stats. Identities = 79/202 (39%), Positives = 116/202 (57%), Gaps = 5/202 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I KL+E+ IN+IAAGE+I RP A+KELIENSLDA +S + + GG QI D+G Sbjct: 22 RIIKLAEEDINRIAAGEVIIRPCNALKELIENSLDANASSISVHLNKGGLKALQIIDDGD 81 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSKI+ D +I TFGFRGEAL SI VS+LT+ ++ + Sbjct: 82 GIHKDDLQIVCERFTTSKITTHKDIRSIKTFGFRGEALSSISHVSYLTITTKKREAPFCY 141 Query: 120 QIAISGEKISSVRPVAM--NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + K + P GTI+ DLF+ + +RL L + E N +V+++ AI Sbjct: 142 TCSYKDGKPTQEEPTICSGKDGTIIRFDDLFYNMNSRLRTL-NHNDEYNKCLEVLQKYAI 200 Query: 178 AYPKVSFTFSTIKSNRYKMNFQ 199 YP V+FT SN ++ Q Sbjct: 201 HYPHVAFTCKKWLSNTVDLSTQ 222 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 54/161 (33%), Gaps = 5/161 (3%) Query: 178 AYPKVSFTFST-IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK---SNEITL 233 +P + N ++ N I ++ G + K Sbjct: 276 PHPYTELERKILDEEKHLDENHKTYLNNVRLTIQKIYGRSISKELSCIFVKEKIPTFFKC 335 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 G PT+ + FIN R V+ + + YA + G YP V L + + Sbjct: 336 YGLISNPTYGGKRGSYI-FFINDRLVKSGILKRMCESQYANFLAKGNYPWVYLSIRLKYD 394 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 VDVNVHP K + F I I + I+ + + S Sbjct: 395 IVDVNVHPTKKEVHFLYQEEIALLISKRIEDFLKNFHNARS 435 >gi|300709183|ref|XP_002996758.1| hypothetical protein NCER_100082 [Nosema ceranae BRL01] gi|239606082|gb|EEQ83087.1| hypothetical protein NCER_100082 [Nosema ceranae BRL01] Length = 573 Score = 220 bits (560), Expect = 5e-55, Method: Composition-based stats. Identities = 130/623 (20%), Positives = 233/623 (37%), Gaps = 83/623 (13%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI KL +I +I AGE+I P +KELIENS+DAES+ + ++ + ++ DNG Sbjct: 3 KITKLPPEIQKRICAGEVIVSPYNVLKELIENSIDAESTFISINVSKDNLN-IEVHDNGH 61 Query: 62 GMTSEEIPMAVQRHCTSKISDDF-SNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 G+ E+ H TSK S+ + FGFRGEAL SI +SHLT+ S+ G + Sbjct: 62 GIEEEDFKNLALAHHTSKFSNSTNYGENFFGFRGEALSSIRCISHLTIKSKVENKELGYE 121 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 S++P++MN GT + ++ LF+ R + ++++ AI P Sbjct: 122 ---RNFTEDSLKPISMNTGTSIYIKYLFYNNKIREKCFHKKLSVYKSMSELANIFAIKNP 178 Query: 181 KVSF-----TFSTIKSNRYKMNFQS-----------------TNGNFPERISQVIGEDFI 218 + F T S + K+++ S + + I++ + Sbjct: 179 NIKFLFNDSTCSYNDVSIDKLDYISDINYLDFIKTIKFTSELQFNDENDLITKSKSKQIG 238 Query: 219 NNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPL 278 + + PT + QF +FIN R V + I S I Y+ +P Sbjct: 239 TIYQISSLRYYSNKFITLIFTPTMINFKSFQFILFINNRLVTSQSIKSFIGKIYSNILPK 298 Query: 279 GRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS 338 GRYP + L + I +DVNVHP+K + + N + ++ +N+ Sbjct: 299 GRYPFIYLEIRIPSEYIDVNVHPSKKEVLLDYEDELLNVLGVILEMGLNE---------- 348 Query: 339 KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENR----LSTNDLLPSDDPTYSEDND 394 +T+ + S ++ + N L + + + + Sbjct: 349 -----------PKETYKGGISNSNVYESNIIYKEYNTLLDCLPSQTTCEYKLLSIQKLKN 397 Query: 395 PVEESEATHYQLGIACA--QIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKI 452 + E + + Q + I ++ Q L+ + + LI+ +F + Sbjct: 398 EIVEIDKSFIQDLVYVGTANIPDINLLVQYNQYLMKCNLTSLIPHLIYHFFLFNFGNFTY 457 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 +S + + + L K E N +P NI Sbjct: 458 SSCCIKSKIK----------DDTLKKMLQEY-FKIEIDDNNNFI--HVP------NIGDY 498 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + D+ + + + I + + C I ++ + L + ++ + Q Sbjct: 499 IGDVKEWENFNIENKIEEKVFREIFSKL-CK--IYRNLELNRQSFSTLKKYLKCTKDVLQ 555 Query: 573 CNHGRPTFIKL-KLSDIEKLFGR 594 TF KL L D+ K F R Sbjct: 556 ------TFTKLKSLKDLYKCFER 572 >gi|74004986|ref|XP_855680.1| PREDICTED: similar to PMS1 protein homolog 1 (DNA mismatch repair protein PMS1) isoform 2 [Canis familiaris] Length = 891 Score = 220 bits (560), Expect = 6e-55, Method: Composition-based stats. Identities = 99/516 (19%), Positives = 191/516 (37%), Gaps = 72/516 (13%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KEL+ENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELLENSLDAGATSIDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R +N Q Sbjct: 62 KAIDAPVMAVKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTASDNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V V LF +P R F K + E + D++ I Sbjct: 122 VLDGSGHIISQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTAKKCKDEIKKVQDLLISYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P++ F K + F+ + Sbjct: 182 LKPELRIVFIHNK---------------------IYLSGFLPKHDVDH------------ 208 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLLLEIDPRQ 294 + + + FIN R V K IL IR Y YP+ L +++ Sbjct: 209 SSTSLSTPERSFI--FINNRPVHQKDILKLIRHYYNLKCLKEASRLYPIFFLKIDVPTAD 266 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS---------- 344 VDVN+ P KS + +N + + + + S +K +SS Sbjct: 267 VDVNITPDKSQVLIQNKEAVLIALENLMTTCYGSLPSTNSYENNKTDVSSADMVVSNTTE 326 Query: 345 ----FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 F++ + + P TS Q + ++ +TN L + +D Sbjct: 327 TDVLFNKMESSGNNYPNVDTSAIPFQNDVCNDKSGKNTNYCLNNQINVDDHCDDHFNSEN 386 Query: 401 ATHYQLGIACAQ------IHQNYIISQTTDGLVIVD-QHAAHERLIFEKMRQDFNSTKIT 453 + + + Q + + ++ +V +H E + + + + Sbjct: 387 SNIDKNTRSIFQEIPMNNLSCEDAQKECSETCFVVSVKHTQSENGN----KSNRDENRKN 442 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 + + + +++ + + + +G E Sbjct: 443 EEGAVPEKPLEISADDWSKGNTLK---NSMGENIEP 475 >gi|17562796|ref|NP_505933.1| PMS (Post Meiotic Segregation) family member (pms-2) [Caenorhabditis elegans] gi|3876842|emb|CAA98478.1| C. elegans protein H12C20.2a, confirmed by transcript evidence [Caenorhabditis elegans] gi|3878022|emb|CAA18355.1| C. elegans protein H12C20.2a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 805 Score = 219 bits (558), Expect = 1e-54, Method: Composition-based stats. Identities = 88/433 (20%), Positives = 186/433 (42%), Gaps = 43/433 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI ++S+++ ++ +++ S AI++LI+NS+DA S+ ++ + G ++ DNG Sbjct: 5 KIERISKEVAERLTTAQVVVSLSSAIRQLIDNSIDAGSTIIDIRVKNNGFESIEVQDNGS 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + + H TSK++ DF + T GFRGEAL ++ VS +++ +R G Sbjct: 65 GIEARNFDALCKPHSTSKLTQFSDFDKLATLGFRGEALNALCTVSSVSIFTRASDTEIGT 124 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAI 177 ++ I + A GT + V LF T+P R +S++ E + ++ A+ Sbjct: 125 RLTYDHSGNIICRQSAARELGTTIIVNKLFETLPVRRKELERSQKREFVKLLSTVQSFAL 184 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIG--------------------- 214 P + + + + + G + + ++ + G Sbjct: 185 LCPHIKILCTNNINGKKTNLICTPGGTTSIQDVVANLFGIARKIENSKIGSGLIPIQQNQ 244 Query: 215 -----EDFINNAVELNEKSNEITLQGYTGIPTFNRGN--ANQFYVFINGRTVQDKFILST 267 + +E + ++G+ G +++ +V+IN R V+ + S Sbjct: 245 PDVEIMTIHSVPMEEMHFFDLFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEYSRVCSV 304 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 I Y + +YP++VL +++ P ++DVNV P K + + + S+ K Sbjct: 305 INDVYKQF-NKKQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASMMKTYL 363 Query: 328 K----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTN----TQEKLFLQENRLSTN 379 K SSV +++++ Q + + + +++ + T + +++ L+T+ Sbjct: 364 KIVGSHSTVRSSVEDRRIMNLSQQSFSNASFMSSKSSTPDDFNNTTLNSTYPEDSLLNTS 423 Query: 380 DLLPSDDPTYSED 392 DLL S Sbjct: 424 DLLKQRKENRSPP 436 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 102/270 (37%), Gaps = 9/270 (3%) Query: 319 IQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 S ++ + L + F + + PK + NT+E E + Sbjct: 530 QCSQDSQTSQNSRVSYFTLRPQQKIKFSMKLLREAYSPKTDETDDNTEEAEVSAEKDVLN 589 Query: 379 NDLLPSDDPTYSEDNDPVEES-EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 + + + S + Q + +II + L IVDQHA+ E+ Sbjct: 590 EITTKINKEENDDAERQLSRSLTKDDFSKMKIIGQFNHGFIICRLRGHLFIVDQHASDEK 649 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 FE+++ S K+T Q L P + + +I E+ H G E F N I Sbjct: 650 YNFERLQS---SAKLTKQPLFMPTALGFGAVQELIIRENLPIFHANGFDFE-FSENDGCI 705 Query: 498 REI----PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQ 553 + P +L+++ L +I+ + RI I A+ AC S+ G+ + Sbjct: 706 KTFLTARPELLNQQLTNSDLEEILAVVSQYPNQMYRPVRIRKIFASKACRKSVMIGKPLN 765 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 EM +++R + K C HGRPT L Sbjct: 766 QREMTQIIRHLAKLDQPWNCPHGRPTIRHL 795 >gi|332209582|ref|XP_003253893.1| PREDICTED: PMS1 protein homolog 1 isoform 2 [Nomascus leucogenys] Length = 891 Score = 219 bits (558), Expect = 1e-54, Method: Composition-based stats. Identities = 92/405 (22%), Positives = 163/405 (40%), Gaps = 58/405 (14%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R +N Q Sbjct: 62 KAIDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + F K +++ + + + T Sbjct: 182 LKPDLRIVFVHNK-------------------------IYLSGFLPKCDADHSFT----- 211 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLLLEIDPRQ 294 + + ++FIN R V K IL IR Y YP+ L +++ Sbjct: 212 -----SLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPIFFLKIDVPTAD 266 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSVLSKKMIS 343 VDVN+ P KS + +N + + + NK +S + ++ K Sbjct: 267 VDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVLSKTAE 326 Query: 344 S---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 + F++ + + TS+ Q + E+ + +D L Sbjct: 327 TDVLFNKMESSGKNYSNVDTSIIPFQNDMHNDESGKNADDCLKHQ 371 >gi|332814962|ref|XP_003309410.1| PREDICTED: PMS1 protein homolog 1 isoform 1 [Pan troglodytes] Length = 893 Score = 219 bits (558), Expect = 1e-54, Method: Composition-based stats. Identities = 100/453 (22%), Positives = 177/453 (39%), Gaps = 62/453 (13%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCVAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + +I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGRILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + F K +++ + + + T Sbjct: 182 LKPDLRIVFVHNK-------------------------IYLSGFLPKCDADHSFT----- 211 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLLLEIDPRQ 294 + + ++FIN R V K IL IR Y YPV L +++ Sbjct: 212 -----SLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTAD 266 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSVLSKKMIS 343 VDVN+ P KS + +N + + + NK +S + ++ K Sbjct: 267 VDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVLSKTAE 326 Query: 344 S---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTYSEDNDPV 396 + F++ + + TS+ Q + E+ +T+D L D Y + + Sbjct: 327 TDVLFNKVESSGKNYSNVDTSIIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGHCSSEI 386 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + ++ SQT Sbjct: 387 SNIDKNTKNAFQDISMSNVSWENSQTEYSKTCF 419 Score = 38.9 bits (89), Expect = 2.8, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 103/301 (34%), Gaps = 29/301 (9%) Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 R + ++ I Q Q ++ + + H+ ++ PK L + EK Sbjct: 591 RYNSQMKRAIEQESQMSLKDGRKKIKPTSAWNLAQK-HKLKTSLSNQPKLDELLQSQIEK 649 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 Q ++ + + + V+ E L + + + +++ Sbjct: 650 RRSQNIKMVQIPFSMKNLKINFKKQNKVDLEEKDEPCLIHNLR--FPDAWLMTSKTEVML 707 Query: 429 VDQHAAHERLIFEKMRQDFN--STKITSQTLLTPEIIDLLEGECALIMEHDED------- 479 ++ + E L+F+++ ++ + + +LT + + L +D Sbjct: 708 LNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTESLFNGSHYLDVLYKMTADDQRYSGST 767 Query: 480 ------LHRLGIKAE-----RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 L G K + N + I + L + L ++I++ I++ + Sbjct: 768 YLSDPRLTANGFKIKLIPGVSITENYLEIEGMANCLPFYGVADL-KEILNAILNRNAKEV 826 Query: 529 LQDRIENILATM---ACYGSIRSGRKMQSIEMNRLLREMEK--NPNSSQCNHGRPTFIKL 583 + R +++ + A S + + ++ ++ M+ +C HGRP F L Sbjct: 827 YECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDIIYRMKHQFGNEIKECVHGRPFFHHL 886 Query: 584 K 584 Sbjct: 887 T 887 >gi|298710162|emb|CBJ31872.1| postmeiotic segregation increased 2 [Ectocarpus siliculosus] Length = 907 Score = 219 bits (558), Expect = 1e-54, Method: Composition-based stats. Identities = 84/459 (18%), Positives = 167/459 (36%), Gaps = 51/459 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + + +I +G++I + A+KEL+ENSLDA + VE + G +++DNG Sbjct: 5 SIKAIDKVSVARICSGQVITDLATAVKELVENSLDAGAKHVEVKLKEFGVDLIEVSDNGS 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTG 118 G++ ++ TSK++ D + + +FGFRGEAL S+ ++ ++ +R + G Sbjct: 65 GVSPSNYEGLALKYHTSKLATFSDLTGVRSFGFRGEALSSLCELAGSFSVTTRTADESVG 124 Query: 119 AQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARL-NFLKSEQVETNLITDVIRRMA 176 + K+ GT V + ++F +P R F ++ + + N + ++ A Sbjct: 125 VKLAYGRNGKMLGKETAPRQVGTTVSISNMFEPLPVRRGEFRRNIKKQFNKLLRGMQAYA 184 Query: 177 IAYPKVSFTFSTIK-SNRYKMNFQSTNGN-FPERISQVIGEDFINNAVELNEKSNEIT-- 232 + V T + K + + + N + ++ V G F+ ++ E Sbjct: 185 LISLGVRITVTNTKAKGGKQTHIGTQYNNKLDDNVTNVFGAKFLKTLSPVSICLPEEGTQ 244 Query: 233 --------------------------------------LQGYTGIPTFNRGNA--NQFYV 252 + G G A ++ ++ Sbjct: 245 NEEEEEEEEEEVENKKQGQQGGSVTGSGAQKAKDGERKIWGMVSKAGVGVGRADNDRQFL 304 Query: 253 FINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPT 312 ++NGR V + + + P +L L + P DVNV P K I Sbjct: 305 YLNGRPVDLPKFTRAVSEVWRAYEM-KQKPAFILDLRLPPGTFDVNVTPDKREIFMTGEA 363 Query: 313 IIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ 372 + + + ++ K T V +++ + D A T A + E Sbjct: 364 EVLDCLKTALHKQWESSRY-TIPVNQGQLVQARLTDGAAFTLRDTAAATSPPPPEARGGA 422 Query: 373 ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 + + D E + +E E + Sbjct: 423 SSVGVVSPGPLEDHVAAEEASGGKDEMELVSGECSKNQG 461 Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 74/187 (39%), Gaps = 9/187 (4%) Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 H+ Q + ++I L I+DQHA E+ FE ++ +T I Q L+ P Sbjct: 705 HFTQMRVVGQFNLGFMICLLGSDLFILDQHACDEKYNFEVLQ---QTTTIHQQPLVRPLP 761 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAERFGPN----AIAIREIPAILSKKNIPQLLRDIID 518 ++ E I+++ R G + + I IP + + ++ Sbjct: 762 LETSASEEMTIIDNIALFERNGFRFTIDDDQPTTKKLKITAIPFSKGTQFGVDDVHELAS 821 Query: 519 EIIDSSTTYTLQD--RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 + D++ + + + A+ AC S G+ + +M R++ +M C HG Sbjct: 822 IVADNTNPGEMVRLPKARAMFASRACRSSFMIGKALDKGQMARVVAKMATIEQPWNCPHG 881 Query: 577 RPTFIKL 583 RPT L Sbjct: 882 RPTMRHL 888 >gi|88861515|ref|ZP_01136129.1| DNA mismatch repair protein mutL [Pseudoalteromonas tunicata D2] gi|88816483|gb|EAR26324.1| DNA mismatch repair protein mutL [Pseudoalteromonas tunicata D2] Length = 165 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 3/161 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L E + NQIAAGE++ RPS +KEL+ENS+D+ ++ + +I GK+ Q+ DNG G Sbjct: 4 IKLLPENVANQIAAGEVVHRPSSVVKELLENSIDSGANLITLIIKDAGKTLIQVFDNGSG 63 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ-NNTGA 119 M+ E++ + RH TSKI S+D ++ T GFRGEAL SI +V+ ++++SR N+ G Sbjct: 64 MSKEDLKICCLRHSTSKIKRSEDLYSLKTMGFRGEALSSISSVAQVSIVSRSNDKNSLGY 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 ++ I G S + N GT + V+ F + FLKS Sbjct: 124 ELKIDGGSEKSFNEIICNKGTSISVKKFIFQRSCKKKFLKS 164 >gi|82594959|ref|XP_725646.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23480728|gb|EAA17211.1| hMLH1 gene product-related [Plasmodium yoelii yoelii] Length = 885 Score = 218 bits (556), Expect = 2e-54, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 117/202 (57%), Gaps = 5/202 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I KL ++ IN+IAAGE+I RP A+KEL+ENSLDA S+ + + GG QI D+G Sbjct: 17 RIIKLCKEDINRIAAGEVIIRPCNALKELVENSLDANSTNISVQLNKGGLKSVQIIDDGD 76 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSKIS D +I TFGFRGEAL SI VS+LT+ ++ ++++ Sbjct: 77 GIHKDDLYIVCERFTTSKISSHKDIRSIKTFGFRGEALASISHVSYLTITTKKRKSSSCY 136 Query: 120 QIAISGEKISSVRPVAM--NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + K + P A GTI+ DLF+ + RL L + E N DV+++ +I Sbjct: 137 TCSYKDGKPTQKEPTACSGKDGTIIRFDDLFYNMKTRLKTL-NHNDEYNKCLDVLQKYSI 195 Query: 178 AYPKVSFTFSTIKSNRYKMNFQ 199 YP V+FT SN ++ Sbjct: 196 HYPHVTFTCKKWLSNVVDLSTY 217 Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 48/135 (35%), Gaps = 4/135 (2%) Query: 203 GNFPERISQVIGEDFINNAVELNEK---SNEITLQGYTGIPTFNRGNANQFYVFINGRTV 259 N I ++ G + + G P++N ++ FIN R V Sbjct: 302 NNTKTIIQKIYGRSVSKELIPIFVNEKIPTFFKCYGLISGPSYNSKKSSYI-FFINDRLV 360 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 + + Y + G YP V L L + VD+NVHP K + F I I Sbjct: 361 ESNILKRACENQYNNFLGKGNYPWVYLALRLKYDIVDINVHPTKKEVHFLYQDEIATLIS 420 Query: 320 QSIQKAINKKGISTS 334 + I++ + S Sbjct: 421 KKIEQVLKNINNMRS 435 >gi|172087935|emb|CAQ35203.1| truncated DNA mismatch repair protein MutL [Staphylococcus aureus subsp. aureus] Length = 151 Score = 218 bits (556), Expect = 2e-54, Method: Composition-based stats. Identities = 52/148 (35%), Positives = 86/148 (58%), Gaps = 3/148 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI++L + N+IAAGE++ERPS +KEL+EN++DA ++ + + G ++ DNG Sbjct: 3 KIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E++ + RH TSK+ +D +I T GFRGEAL SI +V+ +TL + N G Sbjct: 63 GIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCT-DNANGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDL 147 +I + +I + +P R + Sbjct: 122 EIYVENGEILNHKPAKAKKRNRYTCRII 149 >gi|194754970|ref|XP_001959765.1| GF11871 [Drosophila ananassae] gi|190621063|gb|EDV36587.1| GF11871 [Drosophila ananassae] Length = 919 Score = 218 bits (556), Expect = 2e-54, Method: Composition-based stats. Identities = 86/419 (20%), Positives = 166/419 (39%), Gaps = 52/419 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ +++ +++I +G+++ ++A+KEL+ENS+DA ++ VE + G +++DNG+ Sbjct: 25 QIKAIAKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQGVEVSDNGY 84 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSKI + D + TFGFRGEAL S+ A+S + + +R + G Sbjct: 85 GVEESNLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMVIQTRHKSTDVGL 144 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 ++ + E KI P A GT V + +LF T+P R ++ + E + +++ + Sbjct: 145 KVELDHEGKIKKRTPCARGIGTTVTLSNLFVTLPVRRRDFTRNIKKEFTKMCQILQAYCL 204 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN------ 229 V S K + + + + IS + G + + V L Sbjct: 205 VTKGVRILCSNQTPKGAKTVVLQTHSARDVLANISSIFGARQVADLVPLKSPFEKGHLSE 264 Query: 230 --------------------------------EITLQGYTGIPTF--NRGNANQFYVFIN 255 + L+G+ R + ++ + F+N Sbjct: 265 AGLRADLESSADAADTTLTQFSAEDVERLNQADFQLEGFISSCRHGAGRSSRDRQFFFVN 324 Query: 256 GRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIR 315 R K I + Y + + P + L + VDVN+ P K + N Sbjct: 325 SRPCDPKNIAKVMNEIYHRY-NVQQQPFIYLNIVTARSDVDVNLTPDKRQLLINNER--- 380 Query: 316 NFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQEN 374 I+ K + + ++ PKT + N +F +E Sbjct: 381 --ILLLALKKSLLDTFGQTPSTFQMQNTTIVSMFEPKTVKKEEKVEEVNESSNIFQEEE 437 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 60/303 (19%), Positives = 112/303 (36%), Gaps = 21/303 (6%) Query: 293 RQVDVNVHPAKSYIR--FRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 V++NV P + I + +K+ +SK Sbjct: 599 STVNLNVEPPSLSQSTDVTEEDDYDDGIELPTRIEFDKEEEDPDQSMSKYASGELR---- 654 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE----ATHYQL 406 T L + A+ + +E+ + +R L + +++N+ E + + Sbjct: 655 --TSLEEIASKMKAHEEEHRERRSRAKLQRLRFKSEINPNQNNNAEAELQREIGKEDFAR 712 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q + +II + D L IVDQHA E+ FE +++ + Q L P+ +DL Sbjct: 713 MDIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQRTTQ---LEYQRLTVPQSLDLT 769 Query: 467 EGECALIMEHDEDLHRLGIKAERFGP----NAIAIREIPAILSKKNIPQLLRDIIDEIID 522 ++++H + G K E I + P + + + ++I + D Sbjct: 770 AVNEMVLIDHLAVFEKNGFKFEINHDAPATKKIKLLGKPHSKRWEFGKEDIDELIFMLQD 829 Query: 523 SSTTY-TLQDRIENILATMACYGSIRSGRKMQSIE-MNRLLREMEKNPNSSQCNHGRPTF 580 + R+ + A+ AC S+ G + M RL+ +M + C HGRPT Sbjct: 830 APEGTICRPSRVRAMFASRACRKSVMIGTALNRTTTMRRLITQMGEIEQPWNCPHGRPTM 889 Query: 581 IKL 583 L Sbjct: 890 RHL 892 >gi|194387000|dbj|BAG59866.1| unnamed protein product [Homo sapiens] Length = 593 Score = 218 bits (556), Expect = 2e-54, Method: Composition-based stats. Identities = 99/453 (21%), Positives = 176/453 (38%), Gaps = 62/453 (13%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + F K +++ + + + T Sbjct: 182 LKPDLRIVFVHNK-------------------------IYLSGFLPKCDADHSFT----- 211 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLLLEIDPRQ 294 + + ++FIN R V K IL IR Y YPV L +++ Sbjct: 212 -----SLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTAD 266 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSVLSKKMIS 343 VDVN+ P KS + +N + + + NK +S + ++ K Sbjct: 267 VDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVLSKTAE 326 Query: 344 S---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTYSEDNDPV 396 + F++ + + TS+ Q + E+ +T+D L D Y + + Sbjct: 327 TDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGHCSSEI 386 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + ++ SQT Sbjct: 387 SNIDKNTKNAFQDISMSNVSWENSQTEYSKTCF 419 >gi|195334603|ref|XP_002033967.1| GM20141 [Drosophila sechellia] gi|194125937|gb|EDW47980.1| GM20141 [Drosophila sechellia] Length = 901 Score = 218 bits (556), Expect = 2e-54, Method: Composition-based stats. Identities = 88/430 (20%), Positives = 170/430 (39%), Gaps = 47/430 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ + + +++I +G+++ ++A+KEL+ENS+DA ++ VE + G +++DNG Sbjct: 26 QIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQGVEVSDNGS 85 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSKI + D + TFGFRGEAL S+ A+S + + +R + G Sbjct: 86 GVEEMNLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMVIQTRHKSTDVGV 145 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 ++ + + +I P A GT V + +LF T+P R ++ + E + +++ + Sbjct: 146 KVELDHDGRIKKRSPCARGVGTTVLLANLFSTLPVRRRDFTRNIKKEFTKMCQILQAYCL 205 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE----- 230 V S K + + + IS + G + V L + Sbjct: 206 VTKGVRILCSNHTPKGAKTVVLQTHGDQEVMANISAIFGARQAADLVTLKSPFGQGQLTE 265 Query: 231 ---------------------------------ITLQGYTGIPTF--NRGNANQFYVFIN 255 L G+ R + ++ + F+N Sbjct: 266 AELRADLESGADVADTTCPQISTEDVERLNQADFQLDGFISSCRHGAGRSSRDRQFFFVN 325 Query: 256 GRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIR 315 R K I I Y + + P + L + VDVN+ P K + N I+ Sbjct: 326 SRPCDPKNIAKVINEIYHRY-NVQQQPFIYLNIITARSDVDVNLTPDKRQLLINNERILL 384 Query: 316 NFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENR 375 + +S+ + + + + N KT PK + Q + +E+ Sbjct: 385 LALKKSLLDTFGHTPATFQMQNTTIVSMLEPKTNPGKTKFPKEPSKEKEDQNEEASEEDV 444 Query: 376 LSTNDLLPSD 385 +T+ D Sbjct: 445 PTTSTQRFMD 454 Score = 144 bits (363), Expect = 5e-32, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 102/276 (36%), Gaps = 13/276 (4%) Query: 318 IIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLS 377 I I + + S T L + A+SL +++ + R Sbjct: 610 IASDEDDHIKLPTRIEFDEEMEDGLPSNFSSGELTTSLEEIASSLKVHEQQQRDRRTRTK 669 Query: 378 TNDLLPSDDPTYSEDN----DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 L + +++N + E + + Q + +II + D L IVDQHA Sbjct: 670 LQRLRFKTEINPNQNNSAEAELQREIDKEDFARMEIIGQFNLGFIIVKLEDDLFIVDQHA 729 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP- 492 E+ FE +++ + Q L P+ ++L +++ H + + G K E Sbjct: 730 TDEKYNFETLQRTTQ---LEYQRLAVPQNLELTAVNEMVLLNHIDVFEKNGFKFEVDHEA 786 Query: 493 ---NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY-TLQDRIENILATMACYGSIRS 548 + + P + + + ++I + D+ R+ + A+ AC S+ Sbjct: 787 PATKKVRLLGKPHSKRWEFGKEDIDELIFMLQDAPEGTICRPSRVRAMFASRACRKSVMI 846 Query: 549 GRKMQSIE-MNRLLREMEKNPNSSQCNHGRPTFIKL 583 G + M RL+ +M + C HGRPT L Sbjct: 847 GTALSRNTTMRRLITQMGEIEQPWNCPHGRPTMRHL 882 >gi|167377899|ref|XP_001734578.1| DNA mismatch repair protein pms2 [Entamoeba dispar SAW760] gi|165903783|gb|EDR29212.1| DNA mismatch repair protein pms2, putative [Entamoeba dispar SAW760] Length = 891 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 86/399 (21%), Positives = 172/399 (43%), Gaps = 21/399 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I ++E+II ++++G ++ IKEL+EN++D+ ++ + + G + DNG Sbjct: 3 TIHIMNEEIIQKLSSGCVVIDCESVIKELVENAIDSGATIINIKLNNYGLDSIIVEDNGS 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E + + +RHCTSKI+ ++ + ++T+GFRGEAL I + + ++S G Sbjct: 63 GINEENMELLGKRHCTSKINNIEELTKVNTYGFRGEALYCISNMGEVEIIS-SEGKEIGN 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARL-NFLKSEQVETNLITDVIRRMAIA 178 I + V GT + V+ LF R F++++ E + I +I+ A+ Sbjct: 122 SI---QLTTRIKKRVTRKQGTTIIVKKLFMNNKIRREEFMRNKNKELSKIITLIQNYALM 178 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + + QS + E + + D + + + + N I + G Sbjct: 179 LINIKIILIHQFKKSNNILLQSNGKSLKENLYNLFKIDAKDVTIPIEIEENGIKISGIVS 238 Query: 239 IPTF-NRGNANQFYVFINGRTVQDKFILSTIRTAYA--ETIPLGRYPVVVLLLEIDPRQV 295 R N ++ ++F+N R ++ K + I + +YP V+L + + + Sbjct: 239 NFIDKGRTNNDRIFLFVNKRPIEHKKLQQIIIQQWRSLGISFKRKYPTVILNILV--DEY 296 Query: 296 DVNVHPAKSYIRFRNPTIIRNF----IIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 D NV P K + F N + I + ++ I T + SS ++ +P Sbjct: 297 DPNVSPDKRKVFFINEDNVLKLMEKCISSVWSTELLEQNIPTINNDISYSTSSIIENTSP 356 Query: 352 KTH-----LPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 LP+ +L N +++ + +N D+ + Sbjct: 357 IKSFNISFLPQSTQNLINQRKQKIISQNIFDKEDINNNQ 395 Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 79/191 (41%), Gaps = 13/191 (6%) Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 Q ++ +II + L I+DQHAA E +E + K++ QTL++P + + + Sbjct: 701 IGQFNKGFIIGKLGYDLYIIDQHAADEIYNYETLL---KKDKLSVQTLISPLQVTMSCDD 757 Query: 470 CALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 + E+ E + G + ++ + + ++ +++ ++ Sbjct: 758 EIFVQENIELFTQFGFEVIFREDKEVTQRVFLTKVYHRGKNFFGINEFSELVQQLKGCRN 817 Query: 526 TYTLQDRIENI-LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL- 583 + + ++ AT AC SI G + EM ++++ + + C HGR T L Sbjct: 818 DMKVIVKKKHKIFATEACRMSIMIGDSLGREEMKKIIKRLVELNKPWHCPHGRQTIRHLW 877 Query: 584 ----KLSDIEK 590 ++I K Sbjct: 878 DLRRSFNEISK 888 >gi|48526026|gb|AAT45205.1| MutL [Burkholderia cenocepacia] Length = 156 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 48/120 (40%), Positives = 79/120 (65%), Gaps = 2/120 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +++I+QIAAGE++ERP+ +KEL+EN++DA ++ + V+ GG ITD+G G Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGATTLRIVLEEGGVKRISITDDGCG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+ +A+ RH TSKI ++ + T GFRGEAL SI +V+ +++ SR + Sbjct: 83 IPPDELALALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMSITSRTADAAHAMK 142 >gi|17863002|gb|AAL39978.1| SD07911p [Drosophila melanogaster] Length = 895 Score = 217 bits (553), Expect = 4e-54, Method: Composition-based stats. Identities = 84/424 (19%), Positives = 164/424 (38%), Gaps = 52/424 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ + + +++I +G+++ ++A+KEL+ENS+DA ++ VE + G +++DNG Sbjct: 26 QIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQSVEVSDNGS 85 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSKI + D + TFGFRGEAL S+ A+S + + +R + G Sbjct: 86 GVEEMNLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMVIQTRHKSTDVGV 145 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 ++ + E +I P A GT V + +LF T+P R ++ + E + +++ + Sbjct: 146 KVELDHEGRIKKRSPCARGVGTTVLLANLFSTLPVRRRDFTRNIKKEFTKMCQILQAYCL 205 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE----- 230 V S K + + + IS + G + V L + Sbjct: 206 VTKGVRILCSNHTPKGAKTIVLQTHGDQEVMANISAIFGARQAADLVPLKSPFGQGQLTE 265 Query: 231 ---------------------------------ITLQGYTGIPTF--NRGNANQFYVFIN 255 L+G+ R + ++ + F+N Sbjct: 266 AELRADLESGADLADTTSPQISTEDVERLNQADFQLEGFISSCRHGAGRSSRDRQFFFVN 325 Query: 256 GRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIR 315 R K I + Y + + P + L + VDVN+ P K + N Sbjct: 326 SRPCDPKNIAKVMNEVYHRY-NVQQQPFIYLNIITARSDVDVNLTPDKRQLLINNER--- 381 Query: 316 NFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENR 375 I+ K + + ++ PKT+ K +++E + + Sbjct: 382 --ILLLALKKSLLDTFGQTPATFQMQNTTIVSMLEPKTNSGKTKFPKESSKEDQHEEVSE 439 Query: 376 LSTN 379 Sbjct: 440 EDVP 443 Score = 143 bits (361), Expect = 7e-32, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 102/276 (36%), Gaps = 13/276 (4%) Query: 318 IIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLS 377 I I ++ + S T L + A+SL +++ + R Sbjct: 604 IASDEDDHIELPTRIEFDEEMEEGLPSNFSSGEITTSLEEIASSLKAHEQQQRDRRTRTK 663 Query: 378 TNDLLP----SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 L + + S + + E + + Q + +II + D L IVDQHA Sbjct: 664 LQRLRFKTEINPNQNTSAEAELQREIDKEDFARMEIIGQFNLGFIIVKLEDDLFIVDQHA 723 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP- 492 E+ FE +++ + Q L P+ ++L +++ H + + G K E Sbjct: 724 TDEKYNFETLQRTTQ---LEYQRLAVPQNLELTAVNEMVLLNHIDVFEKNGFKFEVDHEA 780 Query: 493 ---NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY-TLQDRIENILATMACYGSIRS 548 + + P + + + ++I + D+ R+ + A+ AC S+ Sbjct: 781 PATKKVRLLGKPHSKRWEFGKEDIDELIFMLQDAPEGTICRPSRVRAMFASRACRKSVMI 840 Query: 549 GRKMQSIE-MNRLLREMEKNPNSSQCNHGRPTFIKL 583 G + M RL+ +M + C HGRPT L Sbjct: 841 GTALSRNTTMKRLITQMGEIEQPWNCPHGRPTMRHL 876 >gi|195488586|ref|XP_002092377.1| GE14157 [Drosophila yakuba] gi|194178478|gb|EDW92089.1| GE14157 [Drosophila yakuba] Length = 899 Score = 217 bits (553), Expect = 4e-54, Method: Composition-based stats. Identities = 90/433 (20%), Positives = 169/433 (39%), Gaps = 55/433 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ +++ +++I +G+++ ++A+KEL+ENS+DA ++ VE + G +++DNG Sbjct: 26 QIKAIAKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQGVEVSDNGS 85 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSKI + D + TFGFRGEAL S+ A+S + + +R + G Sbjct: 86 GVEEMNLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMVIQTRHKSTDVGV 145 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 ++ + E +I P A GT V + +LF T+P R ++ + E + +++ + Sbjct: 146 KVELDHEGRIKKRSPCARGVGTTVVLANLFTTLPVRRRDFTRNIKKEFTKMCQILQAYCL 205 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE----- 230 V S K + + + IS + G V L + Sbjct: 206 VTKGVRILCSNHTPKGAKTVVLQTHGDQEVMANISAIFGARQATELVPLKSPFGQGQLSE 265 Query: 231 ---------------------------------ITLQGYTGIPTF--NRGNANQFYVFIN 255 L+G+ R + ++ + F+N Sbjct: 266 AELRADLESCADVADTTCPQICAEDVERLNQADFQLEGFISSCRHGAGRSSRDRQFFFVN 325 Query: 256 GRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIR 315 R K I + Y + + P + L + VDVN+ P K + N Sbjct: 326 SRPCDPKNIAKVMNEVYHRY-NVQQQPFIYLNIVTARSDVDVNLTPDKRQLLINNER--- 381 Query: 316 NFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY---ATSLTNTQEKLFLQ 372 I+ K + + ++ PKT+ K S N Q K + Sbjct: 382 --ILLLALKKSLLDTFGQTPATFQMQNTTILSMLEPKTNPNKTKFLEDSSNNNQNKEASE 439 Query: 373 ENRLSTNDLLPSD 385 E+ +T+ D Sbjct: 440 EDVPTTSTQRFMD 452 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 58/295 (19%), Positives = 109/295 (36%), Gaps = 15/295 (5%) Query: 301 PAKSYIRFRNPTIIRNF--IIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 PAK + + T + I I ++ + S T L + Sbjct: 589 PAKINPQPPSSTQLSEETDIGSDEDDHIELPTRIEFDEEVEEGMPSNFSSGEITTSLEEI 648 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLP----SDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 TSL +++ + R L + + +S + + E + + Q + Sbjct: 649 ETSLKAHEQQQRDRRARAKLQRLRFKTEINPNQNHSAEAELQREIDKEDFARMEIIGQFN 708 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +II + D L IVDQHA E+ FE +++ + Q L P+ ++L +++ Sbjct: 709 LGFIIVKLEDDLFIVDQHATDEKYNFETLQRTTQ---LEYQRLTVPQSLELTAVNEMVLL 765 Query: 475 EHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY-TL 529 H + + G K E + + P + + + ++I + D+ Sbjct: 766 NHIDVFEKNGFKFQVDHEAPATKKVRLLGKPHSKRWEFGKEDIDELIFMLQDAPEGTICR 825 Query: 530 QDRIENILATMACYGSIRSGRKMQSIE-MNRLLREMEKNPNSSQCNHGRPTFIKL 583 R+ + A+ AC S+ G + M RL+ +M + C HGRPT L Sbjct: 826 PSRVRAMFASRACRKSVMIGTALNRNTTMRRLITQMGEIEQPWNCPHGRPTMRHL 880 >gi|195583626|ref|XP_002081618.1| GD25619 [Drosophila simulans] gi|194193627|gb|EDX07203.1| GD25619 [Drosophila simulans] Length = 713 Score = 217 bits (553), Expect = 4e-54, Method: Composition-based stats. Identities = 86/427 (20%), Positives = 167/427 (39%), Gaps = 47/427 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ + + +++I +G+++ ++A+KEL+ENS+DA ++ VE + G +++DNG Sbjct: 26 QIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQGVEVSDNGS 85 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSKI + D + TFGFRGEAL S+ A+S + + +R + G Sbjct: 86 GVEEMNLEGMTAKYHTSKIREFVDLMGVETFGFRGEALSSLCALSDMVIQTRHKSTDVGV 145 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 ++ + + +I P A GT V + +LF T+P R ++ + E + +++ + Sbjct: 146 KVELDHDGRIKKRSPCARGVGTTVLLANLFSTLPVRRRDFTRNIKKEFTKMCQILQAYCL 205 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE----- 230 V S K + + + IS + G + V L + Sbjct: 206 VTKGVRILCSNHTPKGAKTVVLQTHGDQEVMANISAIFGARQAADLVPLKSPFGQGQLTE 265 Query: 231 ---------------------------------ITLQGYTGIPTF--NRGNANQFYVFIN 255 L G+ R + ++ + F+N Sbjct: 266 AELRADLEYGADVADTTCPQISTEDVERLNQADFQLDGFISSCRHGAGRSSRDRQFFFVN 325 Query: 256 GRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIR 315 R K I + Y + + P + L + VDVN+ P K + N I+ Sbjct: 326 SRPCDPKNIAKVMNEIYHRY-NVQQQPFIYLNIITARSDVDVNLTPDKRQLLINNERILL 384 Query: 316 NFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENR 375 + +S+ + + + + N KT PK ++ +E Sbjct: 385 LALKKSLLDTFGHTPATFQMQNTTIVSMLEPKTNPGKTKFPKESSKEDQNEEASEEDVPT 444 Query: 376 LSTNDLL 382 ST + Sbjct: 445 TSTQRFM 451 >gi|70950802|ref|XP_744693.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56524752|emb|CAH80116.1| hypothetical protein PC000722.03.0 [Plasmodium chabaudi chabaudi] Length = 344 Score = 217 bits (553), Expect = 4e-54, Method: Composition-based stats. Identities = 78/202 (38%), Positives = 116/202 (57%), Gaps = 5/202 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I KL ++ IN+IAAGE+I RP A+KEL+ENSLDA S+ + + GG QI D+G Sbjct: 17 RIIKLCKEDINRIAAGEVIIRPCNALKELVENSLDANSTNISVQLNKGGLKSVQIIDDGD 76 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + +R TSKIS D +I TFGFRGEAL SI VS+LT+ ++ ++ + Sbjct: 77 GIHKDDLYIVCERFTTSKISSHKDIRSIKTFGFRGEALASISHVSYLTITTKKRKSLSCY 136 Query: 120 QIAISGEKISSVRPVAM--NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + K + P A GTI+ DLF+ + RL L + E N DV+++ +I Sbjct: 137 TCSYKDGKPTQKEPTACSGKDGTIIRFDDLFYNMKTRLKTL-NHNDEYNKCLDVLQKYSI 195 Query: 178 AYPKVSFTFSTIKSNRYKMNFQ 199 YP V+FT SN ++ Sbjct: 196 HYPHVTFTCKKWLSNVVDLSTY 217 >gi|77818871|gb|ABB04020.1| rhabdomyosarcoma antigen MU-RMS-40.10E [Homo sapiens] Length = 659 Score = 217 bits (552), Expect = 5e-54, Method: Composition-based stats. Identities = 99/453 (21%), Positives = 176/453 (38%), Gaps = 62/453 (13%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + F K +++ + + + T Sbjct: 182 LKPDLRIVFVHNK-------------------------IYLSGFLPKCDADHSFT----- 211 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLLLEIDPRQ 294 + + ++FIN R V K IL IR Y YPV L +++ Sbjct: 212 -----SLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTAD 266 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSVLSKKMIS 343 VDVN+ P KS + +N + + + NK +S + ++ K Sbjct: 267 VDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVLSKTAE 326 Query: 344 S---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTYSEDNDPV 396 + F++ + + TS+ Q + E+ +T+D L D Y + + Sbjct: 327 TDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGHCSSEI 386 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + ++ SQT Sbjct: 387 SNIDKNTKNAFQDISMSNVSWENSQTEYSKTCF 419 >gi|58736979|dbj|BAD89398.1| PMS1 nirs variant 1 [Homo sapiens] Length = 667 Score = 217 bits (552), Expect = 5e-54, Method: Composition-based stats. Identities = 99/453 (21%), Positives = 176/453 (38%), Gaps = 62/453 (13%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + F K +++ + + + T Sbjct: 182 LKPDLRIVFVHNK-------------------------IYLSGFLPKCDADHSFT----- 211 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLLLEIDPRQ 294 + + ++FIN R V K IL IR Y YPV L +++ Sbjct: 212 -----SLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTAD 266 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSVLSKKMIS 343 VDVN+ P KS + +N + + + NK +S + ++ K Sbjct: 267 VDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVLSKTAE 326 Query: 344 S---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTYSEDNDPV 396 + F++ + + TS+ Q + E+ +T+D L D Y + + Sbjct: 327 TDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGHCSSEI 386 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + ++ SQT Sbjct: 387 SNIDKNTKNAFQDISMSNVSWENSQTEYSKTCF 419 >gi|195120548|ref|XP_002004786.1| GI20104 [Drosophila mojavensis] gi|193909854|gb|EDW08721.1| GI20104 [Drosophila mojavensis] Length = 380 Score = 217 bits (552), Expect = 5e-54, Method: Composition-based stats. Identities = 84/360 (23%), Positives = 151/360 (41%), Gaps = 49/360 (13%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ +++ +++I +G+++ ++AIKEL+ENS+DA ++ +E + G ++ DNG Sbjct: 20 QIKAIAKDTVHKICSGQVVLSLAVAIKELVENSIDAGATLIEIKLKEQGLQGVEVCDNGS 79 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSKI + D + TFGFRGEAL S+ A+S +T+ +R N Sbjct: 80 GVEESNLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMTIQTRHKSTNVAI 139 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 +I + E +I P A GT V + +LF T+P R ++ + E N + +++ + Sbjct: 140 KIELDHEGRIKKRSPCARGVGTTVGLSNLFGTLPVRRRDFTRNIKKEFNKMCQILQAYCL 199 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGE-------------------- 215 V S K + + + IS V G Sbjct: 200 VTRNVRIICSNQSAKGAKSVILQTHGAADVLANISAVFGARQVADLVPLKSPLEAGQLSE 259 Query: 216 -------------------DFINNAVELNEKSNEITLQGYTGIPTF--NRGNANQFYVFI 254 +F VE + L+GY R ++ + F+ Sbjct: 260 AGLREALQTASDAAETTCVEFNAEDVERLNE-AGFELEGYISSCRHGAGRSTRDRQFFFV 318 Query: 255 NGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 N R + K I + Y + + P + L + +VDVN+ P K + N I+ Sbjct: 319 NSRPCEPKNIAKVMNDMYRRY-NVQQQPFIYLNIVTSRAEVDVNLTPDKRQLLLNNERIL 377 >gi|255718257|ref|XP_002555409.1| KLTH0G08624p [Lachancea thermotolerans] gi|238936793|emb|CAR24972.1| KLTH0G08624p [Lachancea thermotolerans] Length = 906 Score = 217 bits (552), Expect = 6e-54, Method: Composition-based stats. Identities = 83/444 (18%), Positives = 171/444 (38%), Gaps = 35/444 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +++ +++I +G++I + A+KEL++NS+D+ + +V G + +DNG Sbjct: 4 KIAAINDADVHRITSGQVIIDLASAVKELLDNSIDSGADQVVCTFKNYGLESLECSDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + +H TSKIS +D S + T GFRGEAL S+ A++ L + + Sbjct: 64 GVPEDSYESLALKHYTSKISSFEDVSQVTTLGFRGEALSSLAAIASLVVTTTTQPPKAAR 123 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 ++ + N GT V V LF +P R F ++ + + + +++ I Sbjct: 124 LEYNFKGELVKKTVTSRNKGTTVHVSQLFNNLPVRKKEFTRNHKRQFSKCIMLLQAYTII 183 Query: 179 YPKVSFTFST---IKSNRYKMNFQSTNGNFPERI----------------------SQVI 213 ++ + ++ G I + Sbjct: 184 QERMKISVWHITGNGRRSLVLSSTKDRGIPKRIIGVFGSSAMQGLSDIHLTLQISPKRSF 243 Query: 214 GEDFINNAVELNEKSNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIRTA 271 V I + GY TF ++ +++IN R V + + Sbjct: 244 SSQLSGAEVSSGSPEYIIVVSGYISRNTFGCGRTAKDRQFIYINQRPVIYPSLAKSCNEV 303 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSI--QKAINKK 329 Y + +YPV VL E+ P +DVNV P K + + + + +++ + + Sbjct: 304 YRTHNNV-QYPVFVLNFELSPEFIDVNVTPDKRTVLLHAESSVIDAFREALADYYSEQEM 362 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 + S+ + K+ + + K + + L +++R + + + + Sbjct: 363 VLPISNTHTVKVDNDNTEPKVAKPGVM--SQELDGEYNNDVGEDSRQTLDGRIDTGPYRE 420 Query: 390 SEDNDPVEESEATHYQLGIACAQI 413 + ESE ++ A++ Sbjct: 421 NGPKTESPESEEREALFDLSNAKV 444 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 14/195 (7%) Query: 400 EATHYQLGIACAQIHQNYIISQTTD----GLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 + ++ Q + +I+ L I+DQHA+ E+ FEK++ +T SQ Sbjct: 700 SKSDFKKMEIVGQFNLGFILVTRRKSGKFDLFIIDQHASDEKYNFEKLQ---KNTVFKSQ 756 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN----AIAIREIPAILSKKNIPQ 511 LL P+I+++ + ++M++ E + G K E + + +P Sbjct: 757 KLLAPQIVEMSIIDELVMMDNLEVFEKNGFKLEIDEEQPQGCRVKVVSLPVSRKTLFDMN 816 Query: 512 LLRDIIDEIIDSS---TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 L ++I + +S +I + A AC SI GR + M R++R + + Sbjct: 817 DLHELIHLVKESDGLSKDSIRCSKIRAMHAMRACRSSIMVGRPLVKKSMLRVVRNLSELD 876 Query: 569 NSSQCNHGRPTFIKL 583 C HGRPT L Sbjct: 877 KPWNCPHGRPTMRHL 891 >gi|189458896|ref|NP_001121615.1| PMS1 protein homolog 1 isoform b [Homo sapiens] gi|58736991|dbj|BAD89404.1| PMS1 nirs variant 7 [Homo sapiens] Length = 893 Score = 216 bits (551), Expect = 6e-54, Method: Composition-based stats. Identities = 99/453 (21%), Positives = 176/453 (38%), Gaps = 62/453 (13%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + F K +++ + + + T Sbjct: 182 LKPDLRIVFVHNK-------------------------IYLSGFLPKCDADHSFT----- 211 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLLLEIDPRQ 294 + + ++FIN R V K IL IR Y YPV L +++ Sbjct: 212 -----SLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTAD 266 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSVLSKKMIS 343 VDVN+ P KS + +N + + + NK +S + ++ K Sbjct: 267 VDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVLSKTAE 326 Query: 344 S---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTYSEDNDPV 396 + F++ + + TS+ Q + E+ +T+D L D Y + + Sbjct: 327 TDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGHCSSEI 386 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + ++ SQT Sbjct: 387 SNIDKNTKNAFQDISMSNVSWENSQTEYSKTCF 419 Score = 38.9 bits (89), Expect = 2.8, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 103/301 (34%), Gaps = 29/301 (9%) Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 R + ++ I Q Q ++ + + H+ ++ PK L + EK Sbjct: 591 RYNSQMKRAIEQESQMSLKDGRKKIKPTSAWNLAQK-HKLKTSLSNQPKLDELLQSQIEK 649 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 Q ++ + + + V+ E L + + + +++ Sbjct: 650 RRSQNIKMVQIPFSMKNLKINFKKQNKVDLEEKDEPCLIHNLR--FPDAWLMTSKTEVML 707 Query: 429 VDQHAAHERLIFEKMRQDFN--STKITSQTLLTPEIIDLLEGECALIMEHDED------- 479 ++ + E L+F+++ ++ + + +LT + + L +D Sbjct: 708 LNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTESLFNGSHYLDVLYKMTADDQRYSGST 767 Query: 480 ------LHRLGIKAE-----RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 L G K + N + I + L + L ++I++ I++ + Sbjct: 768 YLSDPRLTANGFKIKLIPGVSITENYLEIEGMANCLPFYGVADL-KEILNAILNRNAKEV 826 Query: 529 LQDRIENILATM---ACYGSIRSGRKMQSIEMNRLLREMEK--NPNSSQCNHGRPTFIKL 583 + R +++ + A S + + ++ ++ M+ +C HGRP F L Sbjct: 827 YECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDIIYRMKHQFGNEIKECVHGRPFFHHL 886 Query: 584 K 584 Sbjct: 887 T 887 >gi|326334738|ref|ZP_08200944.1| DNA mismatch repair protein MutL [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693051|gb|EGD34984.1| DNA mismatch repair protein MutL [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 142 Score = 216 bits (551), Expect = 6e-54, Method: Composition-based stats. Identities = 58/138 (42%), Positives = 89/138 (64%), Gaps = 2/138 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + NQIAAGE+I+RP+ A+KEL+EN++DA++++++ + G++ Q+ DNG G Sbjct: 5 IRLLPDNVANQIAAGEVIQRPASAVKELLENAIDAQATQIKLFLKDAGRTLVQVVDNGTG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 M+ + +A +RH TSKI DD ++HT GFRGEAL SI A++ + L++ G Sbjct: 65 MSPTDARLAFERHATSKIRTADDLFSLHTKGFRGEALASIAAIAQVELITSEEGQEIGTA 124 Query: 121 IAISGEKISSVRPVAMNP 138 I I G KI P+ N Sbjct: 125 ITIEGNKIIDQYPIVTNK 142 >gi|17136970|ref|NP_477023.1| Pms2 [Drosophila melanogaster] gi|7303075|gb|AAF58142.1| Pms2 [Drosophila melanogaster] Length = 899 Score = 216 bits (551), Expect = 6e-54, Method: Composition-based stats. Identities = 85/412 (20%), Positives = 167/412 (40%), Gaps = 47/412 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ + + +++I +G+++ ++A+KEL+ENS+DA ++ VE + G +++DNG Sbjct: 26 QIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQSVEVSDNGS 85 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSKI + D + TFGFRGEAL S+ A+S + + +R + G Sbjct: 86 GVEEMNLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMVIQTRHKSTDVGV 145 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 ++ + E +I P A GT V + +LF T+P R ++ + E + +++ + Sbjct: 146 KVELDHEGRIKKRSPCARGVGTTVLLANLFSTLPVRRRDFTRNIKKEFTKMCQILQAYCL 205 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE----- 230 V S K + + + IS + G + V L + Sbjct: 206 VTKGVRILCSNHTPKGAKTIVLQTHGDQEVMANISAIFGARQAADLVPLKSPFGQGQLTE 265 Query: 231 ---------------------------------ITLQGYTGIPTF--NRGNANQFYVFIN 255 L+G+ R + ++ + F+N Sbjct: 266 AELRADLESGADLADTTSPQISTEDVERLNQADFQLEGFISSCRHGAGRSSRDRQFFFVN 325 Query: 256 GRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIR 315 R K I + Y + + P + L + VDVN+ P K + N I+ Sbjct: 326 SRPCDPKNIAKVMNEVYHRY-NVQQQPFIYLNIITARSDVDVNLTPDKRQLLINNERILL 384 Query: 316 NFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQE 367 + +S+ + + + + + N+ KT PK ++ +E Sbjct: 385 LALKKSLLDTFGQTPATFQMQNTTIVSMLEPKTNSGKTKFPKESSKDDQHEE 436 Score = 143 bits (361), Expect = 7e-32, Method: Composition-based stats. Identities = 54/276 (19%), Positives = 102/276 (36%), Gaps = 13/276 (4%) Query: 318 IIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLS 377 I I ++ + S T L + A+SL +++ + R Sbjct: 608 IASDEDDHIELPTRIEFDEEMEEGLPSNFSSGEITTSLEEIASSLKAHEQQQRDRRTRTK 667 Query: 378 TNDLLP----SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 L + + S + + E + + Q + +II + D L IVDQHA Sbjct: 668 LQRLRFKTEINPNQNTSAEAELQREIDKEDFARMEIIGQFNLGFIIVKLEDDLFIVDQHA 727 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP- 492 E+ FE +++ + Q L P+ ++L +++ H + + G K E Sbjct: 728 TDEKYNFETLQRTTQ---LEYQRLAVPQNLELTAVNEMVLLNHIDVFEKNGFKFEVDHEA 784 Query: 493 ---NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY-TLQDRIENILATMACYGSIRS 548 + + P + + + ++I + D+ R+ + A+ AC S+ Sbjct: 785 PATKKVRLLGKPHSKRWEFGKEDIDELIFMLQDAPEGTICRPSRVRAMFASRACRKSVMI 844 Query: 549 GRKMQSIE-MNRLLREMEKNPNSSQCNHGRPTFIKL 583 G + M RL+ +M + C HGRPT L Sbjct: 845 GTALSRNTTMRRLITQMGEIEQPWNCPHGRPTMRHL 880 >gi|301766590|ref|XP_002918706.1| PREDICTED: PMS1 protein homolog 1-like isoform 2 [Ailuropoda melanoleuca] Length = 891 Score = 216 bits (551), Expect = 6e-54, Method: Composition-based stats. Identities = 88/414 (21%), Positives = 155/414 (37%), Gaps = 44/414 (10%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ ++ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI V+ + + +R +N Q Sbjct: 62 KAVDTPVMAIKYYTSKIGSHEDLENLTTYGFRGEALGSICCVAEVLITTRTASDNFSTQY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + G I S +P + GT V LF +P R F K + E + D++ I Sbjct: 122 VLDGNGHIISQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKVQDLLISYGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + F +S + + ++ Sbjct: 182 LKPDLRIVFIHN----------------KIYLSGFLPKRDADH----------------- 208 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLLLEIDPRQ 294 + + + + FIN R V K IL IR Y YP+ L +++ Sbjct: 209 SLTSLSTPERSFI--FINSRPVHQKDILKLIRQYYTLKCLKESTRLYPIFFLKIDVPTAD 266 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 VDVN+ P KS + +N + + + + S +K +SS T Sbjct: 267 VDVNLTPDKSQVLLQNKESVLIALENLMTTCYGSLPSTNSYENNKTDVSSADMVVNNTTE 326 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 + ++ + + DD + N + Sbjct: 327 TDVLFNKMESSGNNYANVDTSVIPFQNDVHDDRSGKNTNYCLNPQIHVDDHYDE 380 >gi|195028197|ref|XP_001986963.1| GH21651 [Drosophila grimshawi] gi|193902963|gb|EDW01830.1| GH21651 [Drosophila grimshawi] Length = 903 Score = 216 bits (551), Expect = 7e-54, Method: Composition-based stats. Identities = 80/356 (22%), Positives = 147/356 (41%), Gaps = 47/356 (13%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ +++ +++I +G+++ ++AIKEL+ENS+DA ++ +E + G ++ DNG Sbjct: 20 QIKAIAKDTVHKICSGQVVLSLAVAIKELVENSIDAGATLIEVKLRDQGLQGVEVCDNGS 79 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSKI + D + TFGFRGEAL S+ A+S +T+ +R + Sbjct: 80 GVEEANLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMTIQTRHKSTDVAL 139 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 +I + E KI P A GT V + +LF T+P R ++ + E + +++ + Sbjct: 140 KIELDHEGKIKKRSPCARGVGTTVTLSNLFATLPVRRRDFTRNIKKEFTKMCQILQAYCL 199 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE------------ 223 V S K + + + IS V G + + V Sbjct: 200 VTTSVRIICSNHTPKGVKSVVLQTHGAADVLANISAVFGARQVADLVPLKSPFEAGELSE 259 Query: 224 --------------------------LNEKSNEITLQGYTGIPTF--NRGNANQFYVFIN 255 + L+GY R ++ + F+N Sbjct: 260 ECLRAELQSTSDVAETTCTQFSSEDVQRLNQADFQLEGYISSCRHGAGRSARDRQFFFVN 319 Query: 256 GRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNP 311 R + K I + Y + + P + L + +VDVN+ P K + N Sbjct: 320 ARPCEPKSIAKIMNDVYHRY-NVQQQPFIYLNIVTARDEVDVNLTPDKRQLLLNNE 374 Score = 140 bits (352), Expect = 9e-31, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 86/206 (41%), Gaps = 9/206 (4%) Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + + + + + +E ++ Q + +II + D L IVDQHAA E+ FE + Sbjct: 671 NPNQNQNAEAELQKEITKADFERMQIIGQFNLGFIIVKLDDDLFIVDQHAADEKYNFETL 730 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP----NAIAIRE 499 ++ + Q L P+ ++L ++ ++ + G K E + + Sbjct: 731 QRTTQ---LEHQRLTVPQTLELTAVNEMILQDYLPVFEKNGFKFEINADAPATQKVRLLG 787 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIE-M 557 P + + + + ++I + D+ RI + A+ AC S+ G+ + M Sbjct: 788 KPYSKNWEFGKEDIDELIFMLQDAPEGTICRPSRIRAMFASRACRKSVMIGKALHRSTTM 847 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKL 583 RL+ +M + C HGRPT L Sbjct: 848 RRLITQMGEIEQPWNCPHGRPTMRHL 873 >gi|164423658|ref|XP_962690.2| hypothetical protein NCU08020 [Neurospora crassa OR74A] gi|157070185|gb|EAA33454.2| hypothetical protein NCU08020 [Neurospora crassa OR74A] Length = 894 Score = 216 bits (551), Expect = 8e-54, Method: Composition-based stats. Identities = 83/403 (20%), Positives = 160/403 (39%), Gaps = 31/403 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + I+QI +G++I KEL+EN+LDA ++ ++ G ++ DNG G Sbjct: 7 IKAIDPSTIHQIQSGQVIVDLCSVAKELVENALDAGATTIDVRFKNQGLDSIEVQDNGSG 66 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRP-PQNNTGA 119 ++S +H TSK+S DD S + TFGFRGEAL S+ A+SH T+++ + Sbjct: 67 ISSSNYESIALKHYTSKLSNYDDLSTLQTFGFRGEALSSLCALSHFTIVTCTQKEAPKAT 126 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAI 177 ++ K+ S V+ GT V V +LF ++P R ++ + E + +++ + A Sbjct: 127 KLEFETSGKLKSTSVVSGQRGTTVSVENLFKSLPVRRRELERNIKREWGKVVNLLNQYAC 186 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKSNEITLQG 235 V FT S + +M ST GN E I V G + + ++ + Sbjct: 187 IQTSVKFTVSQQPTKGKRMVLFSTKGNPTTRENIINVFGIKTMTALIAMDLRLQL----- 241 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 PT A + T ++ + E + L R Sbjct: 242 ---KPTNTGLLAKMTAQDDDAMTEGNRATRHAVNEDSDEAVSDEDNAPNTLSTGPKTRAG 298 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 PA + + + S + + ++ + +++ + Sbjct: 299 PCESTPANTQA----------------SNLLARWLERKSEARKQPVSAAINANDSRREKS 342 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 P + + + + ++ S + ++D + E+N ++ Sbjct: 343 PVEKEPQSPKRARRYDTKDAESDAEQDTAEDNEHVENNSMTQD 385 Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats. Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 28/258 (10%) Query: 351 PKTHLPKYATSLTNTQEKLFLQEN--------------RLSTNDLLPSDDPTYSEDNDPV 396 HLP+ T+ ++TQE + ++S +D + Sbjct: 576 WAKHLPRAGTASSSTQESSDGKPTIGLDAADAEEKLSLKISKSDFAKMKIVGQFNLGFII 635 Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 EA+ +Q D L I+DQHA+ E+ FE+++ + SQ Sbjct: 636 AVREASSSHSLEHSPSQQSPAATTQEDDELFIIDQHASDEKYNFERLQSTTT---VQSQR 692 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGI--KAERFGPNAI----AIREIPAILSKKNIP 510 L+ P+ + L E +I+EH L G + + G +A+ + +P Sbjct: 693 LVQPKPLTLTAVEEEIILEHLPALAANGFQVRVDTSGESAVGSRCQLLSLPLSRETTFGV 752 Query: 511 QLLRDIIDEIIDSSTTY-----TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 L ++I + D+ T+ ++ + A AC SI GR + +M +++R M Sbjct: 753 ADLEELIFLLGDNPTSSATTAIPRPSKVRKMFAMRACRSSIMIGRALSRPQMEKVVRHMG 812 Query: 566 KNPNSSQCNHGRPTFIKL 583 + C HGRPT L Sbjct: 813 EMEKPWNCPHGRPTMRHL 830 >gi|268557254|ref|XP_002636616.1| C. briggsae CBR-PMS-2 protein [Caenorhabditis briggsae] Length = 797 Score = 216 bits (550), Expect = 8e-54, Method: Composition-based stats. Identities = 94/432 (21%), Positives = 185/432 (42%), Gaps = 42/432 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI K+S+ + ++ +++ S A+++LI+NS+DA S+ ++ + G ++ DNG Sbjct: 5 KIEKISKDVAERLTTAQVVVSLSSALRQLIDNSIDAGSTIIDIRVKNNGYDSIEVQDNGS 64 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ ++ + H TSK++ DF + T GFRGEAL ++ VS +++ +R + G Sbjct: 65 GIETQNFDALCKPHSTSKLTQFSDFDKLVTLGFRGEALNALCTVSSVSIFTRAADSEIGT 124 Query: 120 Q-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAI 177 + I I+ +P A GT + V +LF T+P R +S++ E + ++ A+ Sbjct: 125 RLIYDHSGNITERQPAARELGTTIIVNNLFETLPVRRKELERSQKREFVKLLATVQSFAL 184 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINN--------------- 220 P + + + + ++ + G I N Sbjct: 185 LCPHIKILCTNNIAGKKTNIICTPGGTSTIQDVVTNLFGMRRIGNSKNGSALVPILQDQP 244 Query: 221 ----------AVELNEKSNEITLQGYTGIPTFNRGN--ANQFYVFINGRTVQDKFILSTI 268 +E + + ++G+ G +++ +V+IN R V+ + S Sbjct: 245 DGEIMAMHSLQMEETQFFDLFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEYMRVCSVT 304 Query: 269 RTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + +YP++VL +++ P ++DVNV P K + + I S+ K K Sbjct: 305 NDVYKQF-NKNQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVIRASMMKTYLK 363 Query: 329 ----KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQ----EKLFLQENRLSTND 380 SSV +++++ Q + + S + F +++ L+T+D Sbjct: 364 IVGSHSTIKSSVEDRRIMALAQQSAINTSICSSKSPSPDDMNDTLLNSTFPEDSLLNTSD 423 Query: 381 LLPSDDPTYSED 392 LL S T S Sbjct: 424 LLKSRSVTRSPP 435 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 98/240 (40%), Gaps = 11/240 (4%) Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 +D + P+ + N+ EK L E +D + + + Sbjct: 556 RDVYSRHINPEPEDPVENSDEKDALDEITTGFKKEETADAERQLSRSLTKD-----DFTK 610 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q + +II + L IVDQHA+ E+ FE+++ NS K+T Q L TP + Sbjct: 611 MQIIGQFNHGFIICRLRGHLFIVDQHASDEKYNFERLQ---NSAKLTKQPLFTPIALGFG 667 Query: 467 EGECALIMEHDEDLHRLGIKAE-RFGPNAIA--IREIPAILSKKNIPQLLRDIIDEIIDS 523 + +I E+ G + R + + P +LS++ L +I+ + + Sbjct: 668 SVQELIIRENLPIFQANGFDFDFREKDGCLKTFLTARPELLSQQLTNSDLEEILAVVSEY 727 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 RI NI A+ AC S+ G+ + EM R++R + K C HGRPT L Sbjct: 728 PNQMYRPVRIRNIFASKACRKSVMIGKPLNHREMTRIIRHLSKLDQPWNCPHGRPTIRHL 787 >gi|33667830|gb|AAQ24515.1| Pms1 [Giardia intestinalis] Length = 727 Score = 216 bits (550), Expect = 9e-54, Method: Composition-based stats. Identities = 124/699 (17%), Positives = 243/699 (34%), Gaps = 123/699 (17%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR LS I A + P + L+ENSLDA +S + V+ G G + DNG Sbjct: 13 RIRSLSAGDSRLILATQQFPDPYKVVSALLENSLDAGASEIAIVLEGMGLKSITVNDNGC 72 Query: 62 GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 G+ + +++ S + +GE++ I A+S + + S + + Sbjct: 73 GLDLSTLQALGS----CRVTTATSQPGSLNRKGESIFLISALSTVLVTSSLGDDP--YER 126 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE---QVETNLITDVIRRMAIA 178 +S + S+ GT V V+DL+ +IP R + + + ITD+I+ A+A Sbjct: 127 VVSEDTSSAKHATRAGRGTTVVVQDLYRSIPVRQRYFSTPSLRKKLLLSITDLIQSYALA 186 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN-------EI 231 + F + ++ S + +R ++ G D + + ++ + Sbjct: 187 NYTLGFRLIVDGAVHIDVSSGS-KNSIHDRYVELFGRDVRSLVGFFSFETRLGYTVKASL 245 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRT-------------AYAETIPL 278 P G+A + ++ NGR + ++ ++ A +PL Sbjct: 246 ACPDAGITPQSKLGHARKIFLSTNGRPILCPSLIEALQQVYARISATNVPIGALNLVLPL 305 Query: 279 GRY------PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRN------------FIIQ 320 G Y P L ++ +D+ +++ N + I N + Sbjct: 306 GTYALARSTPYDTLQMQGLSVFIDLLSEEYLAWLLRYNKSTITNGHLGRDVTSKSLIVRA 365 Query: 321 SIQKAINKKGISTS-----------------SVLSKKMISSFHQDNAPKTHLPKYATSLT 363 + +K++N +S S +S +SF P+ ++ + T Sbjct: 366 AKEKSVNSPCPKSSFGVRSQQRDTVPDNIVISRVSHTKAASFFHTRKPELRQAYHSETNT 425 Query: 364 NTQEKL------------FLQENRLSTNDLLPSDDPTYSEDNDPVEESE----------- 400 NT+ ++ LS + D E ES+ Sbjct: 426 NTEPPPGGTPSVLGIVGFSKLQSSLSNPGPSDASDSIKVESQSCDPESKVRIGPVRRRGS 485 Query: 401 -----ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 + Q +Q+++I+Q + ++DQHAAHE F + + ++ Q Sbjct: 486 ASGFRQQDFNNLKYICQYNQSFLITQLNNTFYLIDQHAAHEAKHFSDYWHNPHCY-LSRQ 544 Query: 456 TLLTPEIIDLLEGECALIMEHDE--DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 +TP + L E + E +G + N + I P++ + + Sbjct: 545 KTITPLKLRLRPDEKLCLEEFLSSAIFDIIGFELC-LSENYVLIFSFPSLFGQTLTEEDF 603 Query: 514 RDIIDEIIDSSTTYT--------------------------LQDRIENILATMACYGSIR 547 R+ + + + + RI I A+ +C S+R Sbjct: 604 REYLLSLYGHTREHVESIICAKSTGSKPREKSLLCLLHNNIAPPRIRKIFASKSCKASVR 663 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 G R++ ++ + C HGRP L L+ Sbjct: 664 LGDPRLDSTAKRIIADLARCEKPFNCPHGRPVLRFLDLA 702 >gi|156087210|ref|XP_001611012.1| DNA mismatch repair protein [Babesia bovis T2Bo] gi|154798265|gb|EDO07444.1| DNA mismatch repair protein, putative [Babesia bovis] Length = 800 Score = 216 bits (550), Expect = 9e-54, Method: Composition-based stats. Identities = 80/382 (20%), Positives = 156/382 (40%), Gaps = 13/382 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +I +IAAGE++ RP+ AIKELIENS+DA ++ ++ IA + +++DNG G Sbjct: 8 IKPLDPSVIAKIAAGEVVLRPAAAIKELIENSIDAGATEIKINIADNPLEYVEVSDNGHG 67 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 ++ E++ + +R+ TSK D+ + +FGFRGEAL ++ S++T+ SR + + Sbjct: 68 ISPEDMRLVCKRYTTSKTHDNIVGVKSFGFRGEALAALSHASNVTISSRTCKQTMRLVMK 127 Query: 123 ISGEK--ISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAY 179 + + A GT + +LFF + R S VE NL ++++ A+ + Sbjct: 128 YHNGEPLVDIADEKAGPVGTTITYENLFFNMGTREKALSSSPSVEFNLCLELVQNYAMHF 187 Query: 180 PKVSFTFSTIKSNRYKMNFQ-----STNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 P F F + S+ + +N + + I ++ + + K + + Sbjct: 188 PDFKFVFHKVGSSTNDLMTDGSIRAPSNNDASDHIDSGSSPEYNVPNTDYDYKHFNM-VD 246 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPV-VVLLLEIDPR 293 Y + + + + I Y + Y V + Sbjct: 247 LYPPESNGTPSLLEYKDNVVKYSKMHLRKVKEVISLIYGTAVSNALYEFQVHSTSHVYYN 306 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 HP ++ + N +++ + K L K F + Sbjct: 307 CKGFFTHPNETNRCHSFILFVNNRLVE--HPGLKKNIDKIYKELMHKKQRRFVY-LSIYM 363 Query: 354 HLPKYATSLTNTQEKLFLQENR 375 + ++ ++EK+F + Sbjct: 364 PYERIDANVHPSKEKVFFKHQE 385 Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 4/125 (3%) Query: 206 PERISQVIGEDFINNAVELNEK---SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDK 262 E IS + G N E +G+ P + +F+N R V+ Sbjct: 277 KEVISLIYGTAVSNALYEFQVHSTSHVYYNCKGFFTHPNETNRCHSFI-LFVNNRLVEHP 335 Query: 263 FILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSI 322 + I Y E + + V L + + ++D NVHP+K + F++ I I + Sbjct: 336 GLKKNIDKIYKELMHKKQRRFVYLSIYMPYERIDANVHPSKEKVFFKHQEEIVEEIGDKL 395 Query: 323 QKAIN 327 ++ + Sbjct: 396 RERLR 400 >gi|58737035|dbj|BAD89426.1| postmeiotic segregation increased 2 nirs variant 2 [Homo sapiens] Length = 461 Score = 216 bits (549), Expect = 1e-53, Method: Composition-based stats. Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 6/228 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P GT V V+ LF T+P R F ++ + E + V+ I Sbjct: 135 LMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCII 194 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVEL 224 + + + + T G + E I V G+ + + + Sbjct: 195 SAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242 Score = 147 bits (371), Expect = 6e-33, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 9/182 (4%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q + +II++ + + IVDQHA E+ FE ++Q T + Q L+ P+ ++L Sbjct: 275 MEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQH---TVLQGQRLIAPQTLNLT 331 Query: 467 EGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 A+++E+ E + G A I +P + PQ + ++I + Sbjct: 332 AVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLI-SLPTSKNWTFGPQDVDELIFMLS 390 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 DS R++ + A+ AC S+ G + + EM +L+ M + + C HGRPT Sbjct: 391 DSPGVMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMR 450 Query: 582 KL 583 + Sbjct: 451 HI 452 >gi|284055020|ref|ZP_06385230.1| DNA mismatch repair protein [Arthrospira platensis str. Paraca] Length = 431 Score = 216 bits (549), Expect = 1e-53, Method: Composition-based stats. Identities = 106/475 (22%), Positives = 188/475 (39%), Gaps = 65/475 (13%) Query: 131 VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 + VA+ PGT+V+V +LF +R + + +++++A+ +P+V++ Sbjct: 1 METVAIAPGTVVKVSNLFANWSSRRTAGPTATQQLRAAQLMLQQIALCHPQVTWQIHQND 60 Query: 191 SNRYKM-NFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF------- 242 + +T PE I V D ++++ + Sbjct: 61 RPWLRFGPAVTTQQMLPEFIRGVRVGDLQYLKMDVDPPQQVEECHKFLSKSWLEVVIGLP 120 Query: 243 ---NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 +R + + +NGR V+ + TI +A++ T RYPV + L IDP +D N Sbjct: 121 DRASRRRKDWVKIGVNGRMVRSPELEPTILSAFSRTCGRDRYPVCFVHLHIDPALIDWNR 180 Query: 300 HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 HP+K+ I + I +I + + P+ Sbjct: 181 HPSKAEIYLHYLNHWQEQIHLAIDQTLKLN--------------------------PESL 214 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 ++ N EKL ++ T + E + A QIH YI+ Sbjct: 215 SAGVNPIEKLLRVSEDTASY-------RTRPTPLESAENPQRVDVPKLKAIGQIHNTYIV 267 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 ++ +GL +V+QH AHER+I+E++ + + +++ ++ L E Sbjct: 268 AEHPEGLWLVEQHIAHERVIYEQLCRRWQVIPLSTPIIVAN-----------LSEAQLEQ 316 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 L RL ++ + FG AIR P IL L +D + +I+ S LQ Sbjct: 317 LTRLNLEVDPFGDGLWAIRSAPEIL------ALRQDCQEALIELSLGGDLQ----AAQVA 366 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC +IR+G + EM LL + + C HGRP F+ L+ S + + F R Sbjct: 367 TACRSAIRNGTSLSLTEMQTLLDQWVSTRSPRTCPHGRPIFLSLEESSLARFFRR 421 >gi|289672582|ref|ZP_06493472.1| DNA mismatch repair protein [Pseudomonas syringae pv. syringae FF5] Length = 220 Score = 216 bits (549), Expect = 1e-53, Method: Composition-based stats. Identities = 80/205 (39%), Positives = 127/205 (61%) Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 S + ES LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + Sbjct: 14 SAAPASLPESPGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMAN 73 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE I + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 74 EGLSGQPLLVPESIAVSQREADCAEEHLATFQRLGFELQRLGPETLAIRQIPALLKQAEA 133 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME Sbjct: 134 NRLVSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTER 193 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L+D++KLF R Sbjct: 194 SGQCNHGRPTWTQMGLNDLDKLFLR 218 >gi|330899891|gb|EGH31310.1| DNA mismatch repair protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 222 Score = 216 bits (549), Expect = 1e-53, Method: Composition-based stats. Identities = 80/205 (39%), Positives = 127/205 (61%) Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 S + ES LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + Sbjct: 16 SAAPASLPESPGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMAN 75 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 ++ Q LL PE I + + E EH RLG + +R GP +AIR+IPA+L + Sbjct: 76 EGLSGQPLLVPESIAVSQREADCAEEHLATFQRLGFELQRLGPETLAIRQIPALLKQAEA 135 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 +L+ D++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME Sbjct: 136 NRLVSDVLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTER 195 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 S QCNHGRPT+ ++ L+D++KLF R Sbjct: 196 SGQCNHGRPTWTQMGLNDLDKLFLR 220 >gi|260223094|emb|CBA33314.1| DNA mismatch repair protein mutL [Curvibacter putative symbiont of Hydra magnipapillata] Length = 495 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 88/297 (29%), Positives = 149/297 (50%), Gaps = 24/297 (8%) Query: 51 KSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTL 108 + D+G G+ +E+P+A +RH TSKI + D ++ T GFRGEAL +I +++ + Sbjct: 1 MRLISVEDDGQGILRDELPIAFKRHATSKIGNLQDLESVATMGFRGEALAAINSIADCAI 60 Query: 109 MSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLI 168 +SR N + ++ RPVA GT VEV++LF++ PAR FLK++ E Sbjct: 61 LSRASGLNDAYLLDGRTGEL---RPVARGQGTTVEVKELFYSTPARRKFLKTDATELAHC 117 Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQ-----------STNGNFPERISQVIGEDF 217 + +RR A+A P V F + + +R+S V+G +F Sbjct: 118 IESVRRHALARPDVGFAIWHEGKLVEQWRRCLDVPLADAAVDAALAALDQRLSDVLGPEF 177 Query: 218 INNAVELNEK--------SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIR 269 + +V ++ + + G G+P R A+Q + ++NGR V+DK + R Sbjct: 178 LAQSVRVDWHSKQANEFGQPALRVWGRAGVPDAARSRADQQFCYVNGRFVRDKVLTHAAR 237 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 +AY + + R PV L + +DP +VDVNVHP K +RFR+ + + +++ + Sbjct: 238 SAYEDVLHGNRQPVYALYVAMDPTRVDVNVHPTKIEVRFRDSREVHQAVRHAVEDTL 294 >gi|325295324|ref|YP_004281838.1| ATP-binding region ATPase domain protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065772|gb|ADY73779.1| ATP-binding region ATPase domain protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 482 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 109/483 (22%), Positives = 193/483 (39%), Gaps = 35/483 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L +II++IA+G+I P +KELIEN++DA+++ + I F++TDNG G Sbjct: 2 IKRLPPEIISKIASGQIASSPMNVLKELIENAIDAKATEILIRIKD--HFNFKVTDNGIG 59 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +E+P AV+R TSKIS D S I+T+GFRGEAL +I VSHLT+ SR + + G + Sbjct: 60 IPYKELPTAVERFTTSKISTIRDLSQINTYGFRGEALYAISQVSHLTIKSRFQEESIGGK 119 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + G KI S P++ + GT V V L+F +P R + +++ A+ P Sbjct: 120 LEVKGGKILSHSPISFSRGTSVLVSSLYFNVPVRKKCFDLREKRNLK--KIVKTFALCRP 177 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 +++F + ERI Q+ G++ + + G Sbjct: 178 EITFKLDNE---------VFFASSLEERIRQIFGKEITFEKELSKRFTIFYLTEKEEGRR 228 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + +F+N R V + + + + Y +L + + P +VDVNV Sbjct: 229 KISF-------IFVNKRPVSLPEVEKVLSE-----LNIKNY---ILFINVTPEEVDVNVT 273 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K + R+ + + + K + T VL +K + Sbjct: 274 PTKDKVILRD----FSILEEMKNLLAKKVFLPTFPVLREKKEIHYQTPIEVLGSDGTIIV 329 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 + + F Q + +S+ + + + I Sbjct: 330 AHDSEYFYFFDQHLIHERVNYEELISLLFSKKVPLKRIFPPMEVDFSVKLTDKLEKFGIE 389 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 G I H+ E L E +++ N S + + + + E Sbjct: 390 YEKVGKTIF-IHSIPEILRVEDIKKIINGETPESIAEIACKKAIKSGYKPLNFNDIKELF 448 Query: 481 HRL 483 + Sbjct: 449 EKY 451 Score = 107 bits (266), Expect = 7e-21, Method: Composition-based stats. Identities = 51/235 (21%), Positives = 99/235 (42%), Gaps = 25/235 (10%) Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 ++T T++K+ L++ + + + E + HYQ I I++ Sbjct: 271 NVTPTKDKVILRDFSILEEMKNLLAKKVFLPTFPVLREKKEIHYQTPIEVLGSDGTIIVA 330 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 ++ DQH HER+ +E++ S K+ + + P +D + L Sbjct: 331 HDSEYFYFFDQHLIHERVNYEELISLLFSKKVPLKRIFPPMEVDFSVKLT-------DKL 383 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 + GI+ E+ G I I IP IL ++I +++ ++ + +A + Sbjct: 384 EKFGIEYEKVG-KTIFIHSIPEILRVEDIKKIIN------GETPES----------IAEI 426 Query: 541 ACYGSIRSG-RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC +I+SG + + ++ L + N C HGRP + ++K S I + GR Sbjct: 427 ACKKAIKSGYKPLNFNDIKELFEKYLLCKNRETCPHGRPIYYRIKKSKIMRKVGR 481 >gi|330939866|gb|EGH43096.1| DNA mismatch repair protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 206 Score = 215 bits (548), Expect = 2e-53, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 126/199 (63%) Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 + ES LG A AQ+ YI+++ GLV+VD HAAHER+++E+++ + ++ Q Sbjct: 6 LPESPGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYERLKIAMANEGLSGQ 65 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL PE I + + E EH RLG + +R GP +AIR+IPA+L + +L+ D Sbjct: 66 PLLVPESIAVSQREADCAEEHLATFQRLGFELQRLGPETLAIRQIPALLKQAEANRLVSD 125 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 ++ ++++ T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME S QCNH Sbjct: 126 VLADLMEYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTERSGQCNH 185 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRPT+ ++ L+D++KLF R Sbjct: 186 GRPTWTQMGLNDLDKLFLR 204 >gi|195384627|ref|XP_002051016.1| GJ19872 [Drosophila virilis] gi|194145813|gb|EDW62209.1| GJ19872 [Drosophila virilis] Length = 886 Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats. Identities = 81/358 (22%), Positives = 148/358 (41%), Gaps = 47/358 (13%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ +++ +++I +G+++ ++AIKEL+ENS+DA ++ +E + G ++ DNG Sbjct: 20 QIKAIAKDTVHKICSGQVVLSLAVAIKELVENSIDAGATLIEVKLKDQGLQGVEVCDNGS 79 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSKI + D + TFGFRGEAL S+ A+S + + +R + Sbjct: 80 GVEEANLAGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMAIQTRHKSADVAL 139 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 +I + E KI P A GT V + +LF T+P R ++ + E N + +++ + Sbjct: 140 KIELDHEGKIKKRSPCARGVGTTVTLSNLFATLPVRRRDFTRNIKKEFNKMCQILQAYCL 199 Query: 178 AYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN------ 229 V S K + + + IS + G + + V L Sbjct: 200 VTRGVRIICSNQTPKGVKSVLLQTHGAQDVLANISAIFGVRQVADLVPLKSPFEAGEISE 259 Query: 230 --------------------------------EITLQGYTGIPTF--NRGNANQFYVFIN 255 L+GY R ++ + F+N Sbjct: 260 ERLRAELQSASDTAETTCIAFGAEDVERLNQAGFQLEGYISSCRHGAGRSTRDRQFFFVN 319 Query: 256 GRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTI 313 R + K I + Y + + P + L + +VDVN+ P K + N I Sbjct: 320 ARPCEPKNIAKVMNDVYHRY-NVQQQPFIYLNIVTSRAEVDVNLTPDKRQLLLNNERI 376 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 9/206 (4%) Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + + + + +E ++ Q + +II + D L IVDQHAA E+ FE + Sbjct: 661 NPSQNQNAEAELQKEITKADFERMQIIGQFNLGFIIVKLDDDLFIVDQHAADEKYNFETL 720 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP----NAIAIRE 499 ++ +T++ Q L P+ ++L ++ +H + G K E + + Sbjct: 721 QR---NTQLEHQRLTVPQTLELTAVNEMILQDHLPVFEKNGFKFEINADAPATKKVRLLG 777 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTY-TLQDRIENILATMACYGSIRSGRKM-QSIEM 557 P + + + + ++I + D+ RI + A+ AC S+ G+ + ++ M Sbjct: 778 KPFSKNWEFGKEDIDELIFMLQDAPEGTICRPSRIRAMFASRACRKSVMIGKALHRTTTM 837 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKL 583 RL+ +M + C HGRPT L Sbjct: 838 RRLITQMGEIEQPWNCPHGRPTMRHL 863 >gi|3193224|gb|AAC19245.1| mutL homolog PMS2 [Drosophila melanogaster] Length = 893 Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats. Identities = 80/423 (18%), Positives = 156/423 (36%), Gaps = 52/423 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ + + +++I +G+++ ++A+KEL+ENS+DA ++ VE + G +++DNG Sbjct: 26 QIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQSVEVSDNGS 85 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSKI + D + TFGFRGEAL S+ A+S + + +R + Sbjct: 86 GVEEMNLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMVIQTRHKSTDGVK 145 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAIA 178 +I P A GT V + +LF T+P R ++ + E + +++ + Sbjct: 146 VELDHEGRIKKRSPCARGVGTTVLLANLFSTLPVRRRDFTRNIKKEFTKMCQILQAYCLV 205 Query: 179 YPKVSFTFSTI-----------------------------KSNRYKMNFQSTNGNFPE-- 207 V S + G E Sbjct: 206 TKGVRILCSNHTPKGPKLLCYKRMVTRRSWPIYQPYRSTPGRGSVPLKSPFGQGQLTEAE 265 Query: 208 ---------RISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF--NRGNANQFYVFING 256 ++ VE + + L+G+ R + ++ + F+N Sbjct: 266 LRADLESGADLADTTSPQISTEDVERLNQ-ADFQLEGFISSCRHGAGRSSRDRQFFFVNS 324 Query: 257 RTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRN 316 R K I + Y + + P + L + VDVN+ P K + N Sbjct: 325 RPCDPKNIAKVMNEVYHRY-NVQQQPFIYLNIITARSDVDVNLTPDKRQLLINNER---- 379 Query: 317 FIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL 376 I+ K + + ++ PKT+ K +++E + + Sbjct: 380 -ILLLALKKSLLDTFGQTPATFQMQNTTIVSMLEPKTNSGKTKFPKESSKEDQHEEVSEE 438 Query: 377 STN 379 Sbjct: 439 DVP 441 Score = 143 bits (361), Expect = 7e-32, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 101/276 (36%), Gaps = 13/276 (4%) Query: 318 IIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLS 377 I I ++ + S T L + A+SL +++ + R Sbjct: 602 IASDEDDHIELPTRIEFDEEMEEGLPSNFSSGEITTSLEEIASSLKAHEQQQRDRRTRTK 661 Query: 378 TNDLLPSDDPTYSEDNDPVEE----SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 L + +++ E + + Q + +II + D L IVDQHA Sbjct: 662 LQRLRFKTEINPNQNTSAEAELRREIDKEDFAPMEIIGQFNLGFIIVKLEDDLFIVDQHA 721 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP- 492 E+ FE +++ + Q L P+ ++L +++ H + + G K E Sbjct: 722 TDEKYNFETLQRTTQ---LEYQRLAVPQNLELTAVNEMVLLNHIDVFEKNGFKFEVDHEA 778 Query: 493 ---NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY-TLQDRIENILATMACYGSIRS 548 + + P + + + ++I + D+ R+ + A+ AC S+ Sbjct: 779 PATKKVRLLGKPHSKRWEFGKEDIDELIFMLQDAPEGTICRPSRVRAMFASRACRKSVMI 838 Query: 549 GRKMQSIE-MNRLLREMEKNPNSSQCNHGRPTFIKL 583 G + M RL+ +M + C HGRPT L Sbjct: 839 GTALSRNTTMRRLITQMGEIEQPWNCPHGRPTMRHL 874 >gi|33667832|gb|AAQ24516.1| Mlh1 [Giardia intestinalis] Length = 786 Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats. Identities = 98/553 (17%), Positives = 192/553 (34%), Gaps = 66/553 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L + + ++AAGE+I+RP KEL+EN+ DA++ + ++ + D G Sbjct: 3 PIRILDPETVAKMAAGEVIQRPFNVAKELVENATDADAPTIRLFVSSNCYDLLMVCDTGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + + R TSKI D +I +FGFRGEAL SI VS + ++S+ Sbjct: 63 GIERTDYSLLCHRFATSKIETFSDIYSIQSFGFRGEALSSISYVSRMIVVSKTKNQPAYV 122 Query: 120 QIAIS------------GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNL 167 + I + + + TI+ V DLF+ P R N ++S + +L Sbjct: 123 AVYIDGKLHFDPKTLTSEHTDFFISTLKADSFTIICVTDLFYAEPIRRNQIRSSKTSLDL 182 Query: 168 ITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERI------------------ 209 +++ ++ A P ++ S I + + + N + I Sbjct: 183 -QELLISISAANPTREYSISFIDNPQAIQREIQSWLNDTQHISGMLSLISYTIEFGTATL 241 Query: 210 --------------------SQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ 249 SQ G V+ K + + ++ Sbjct: 242 HFSSTTTRYQRFLQVLTALLSQTKGCGTEPLQVQSLVKHYPCDTCRELSFYFVDPVDHSR 301 Query: 250 FY-------VFINGRTVQDKFILSTIRTAYAETIP-LGRYPVVVLLLEIDPRQVDVNVHP 301 +FINGR VQ + + +++ + +L + +DP D NVHP Sbjct: 302 QDKRLINLLIFINGRRVQYPRLKNAVQSVVDIYLSAFSTIQAGILWIAVDPGGCDPNVHP 361 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 +K + +I +I + + + + + T+ L + + AP + + + Sbjct: 362 SKERVLLLEEEVIYTAVIDMLTQHMKEHHVKTAEQLLSQPKTKLRPRLAPTDNSVQKSNR 421 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 L NT + F + + + A +S Sbjct: 422 LINTLDSSFKGTSSPLYKQRHDPSMVSILRFENVQRTPREREPPNTQTSAPCSPPLQLSH 481 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 D E + R+ + + + +++ + ++ E L+ Sbjct: 482 HID-----SHDQEGEGKQVDCDRESKENQTTDISDTAITDDVVIIQQVQDIQAQNAEPLN 536 Query: 482 RLGIKAERFGPNA 494 + + FG + Sbjct: 537 YMAFFDKEFGEYS 549 >gi|159108256|ref|XP_001704400.1| Mlh1-like protein [Giardia lamblia ATCC 50803] gi|157432462|gb|EDO76726.1| Mlh1-like protein [Giardia lamblia ATCC 50803] Length = 786 Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats. Identities = 98/553 (17%), Positives = 192/553 (34%), Gaps = 66/553 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L + + ++AAGE+I+RP KEL+EN+ DA++ + ++ + D G Sbjct: 3 PIRILDPETVAKMAAGEVIQRPFNVAKELVENATDADAPTIRLFVSSNCYDLLMVCDTGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + + R TSKI D +I +FGFRGEAL SI VS + ++S+ Sbjct: 63 GIERTDYSLLCHRFATSKIETFSDIYSIQSFGFRGEALSSISYVSRMIVVSKTKNQPAYV 122 Query: 120 QIAIS------------GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNL 167 + I + + + TI+ V DLF+ P R N ++S + +L Sbjct: 123 AVYIDGKLHFDPKTLTSEHTDFFISTLKADSFTIICVTDLFYAEPIRRNQIRSSKTSLDL 182 Query: 168 ITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERI------------------ 209 +++ ++ A P ++ S I + + + N + I Sbjct: 183 -QELLISISAANPTREYSISFIDNPQAIQREIQSWLNDTQHISGMLSLISYTIEFGTATL 241 Query: 210 --------------------SQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ 249 SQ G V+ K + + ++ Sbjct: 242 HFSSTTTRYQRFLQVLTALLSQTKGCGTEPLQVQSLVKHYPCDTCRELSFYFVDPVDHSR 301 Query: 250 FY-------VFINGRTVQDKFILSTIRTAYAETIP-LGRYPVVVLLLEIDPRQVDVNVHP 301 +FINGR VQ + + +++ + +L + +DP D NVHP Sbjct: 302 QDKRLINLLIFINGRRVQYPRLKNAVQSVVDIYLSAFSTIQAGILWIAVDPGGCDPNVHP 361 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 +K + +I +I + + + + + T+ L + + AP + + + Sbjct: 362 SKERVLLLEEEVIYTAVIDMLTQHMKEHHVKTAEQLLSQPKTKLRPRLAPTDNSVQKSNR 421 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 L NT + F + + + A +S Sbjct: 422 LINTLDSSFKGTSSPLYKQRHDPSMVSILRFENVQRTPREREPPNTQTSAPCSPPLQLSH 481 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 D E + R+ + + + +++ + ++ E L+ Sbjct: 482 HID-----SHDQEGEGKQVDCDRESKENQTTDISDTAITDDVVIIQQVQDIQAQNAEPLN 536 Query: 482 RLGIKAERFGPNA 494 + + FG + Sbjct: 537 YMAFFDKEFGEYS 549 >gi|194882839|ref|XP_001975517.1| GG22356 [Drosophila erecta] gi|190658704|gb|EDV55917.1| GG22356 [Drosophila erecta] Length = 888 Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats. Identities = 86/424 (20%), Positives = 166/424 (39%), Gaps = 52/424 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ +++ +++I +G+++ ++A+KEL+ENS+DA ++ VE + G +++DNG Sbjct: 26 QIKAIAKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQGVEVSDNGS 85 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + ++ TSKI + D + TFGFRGEAL S+ A+S + + +R ++ G Sbjct: 86 GVEEMNLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMVIQTRHKSSDVGV 145 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 ++ + E +I P A GT V + +LF T+P R ++ + E + +++ + Sbjct: 146 KVELDHEGRIKKRSPCARGVGTTVVLANLFTTLPVRRRDFTRNIKKEFTKMCQILQAYCL 205 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPER--ISQVIGEDFINNAVE------------ 223 V S K T+G+ IS + G + V Sbjct: 206 VTKGVRILCSNHTPKGAKTVVLQTHGDHEVMANISAIFGTRQAADLVPLKSPFGDRQLSE 265 Query: 224 --------------------------LNEKSNEITLQGYTGIPTF--NRGNANQFYVFIN 255 +I L+G+ R + ++ + F+N Sbjct: 266 AELRSDLESCADVADTNCPQFSAEDVERLNQADIKLEGFISSCRHGAGRSSRDRQFFFVN 325 Query: 256 GRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIR 315 R K I + Y + + P + L + VDVN+ P K + N Sbjct: 326 SRPCDPKNIAKVMNEVYHRY-NVQQQPFIYLNIVTARSDVDVNLTPDKRQLLINNER--- 381 Query: 316 NFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENR 375 I+ K + + ++ PKT+ K ++E + + Sbjct: 382 --ILLLALKKSLLDTFGQTPATFQMQNTTIVSMLEPKTNPDKTKFQEELSKENKNEEASE 439 Query: 376 LSTN 379 Sbjct: 440 EDVP 443 Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats. Identities = 53/276 (19%), Positives = 102/276 (36%), Gaps = 13/276 (4%) Query: 318 IIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLS 377 I I ++ + S + L + A+SL ++ + R Sbjct: 597 IASDEDDHIALPAKIEFDEEVEEGLPSNFSSGEIISSLEEIASSLKAHEQHQRDRRARAK 656 Query: 378 TNDLLPSDDPTYSEDN----DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 L + +++N + E + + Q + +II + D L IVDQHA Sbjct: 657 LQRLRFKTEINPNQNNSAEAELQREIDKEDFARMEIIGQFNLGFIIVKLEDDLFIVDQHA 716 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP- 492 E+ FE +++ + Q L P+ ++L +++ H + + G K E Sbjct: 717 TDEKYNFETLQRTTQ---LEYQRLTVPQSLELTAVNEMVLLNHIDVFEKNGFKFEVDHEA 773 Query: 493 ---NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY-TLQDRIENILATMACYGSIRS 548 + + P + + + ++I + D+ R+ + A+ AC S+ Sbjct: 774 PATKKVRLLGKPHSKRWEFGKEDIDELIFMLQDAPEGTICRPSRVRAMFASRACRKSVMI 833 Query: 549 GRKMQSIE-MNRLLREMEKNPNSSQCNHGRPTFIKL 583 G + M RL+ +M + C HGRPT L Sbjct: 834 GTALNRNTTMRRLITQMGEIEQPWNCPHGRPTMRHL 869 >gi|121719966|ref|XP_001276681.1| DNA mismatch repair protein, putative [Aspergillus clavatus NRRL 1] gi|119404893|gb|EAW15255.1| DNA mismatch repair protein, putative [Aspergillus clavatus NRRL 1] Length = 883 Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats. Identities = 94/437 (21%), Positives = 164/437 (37%), Gaps = 42/437 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + + I + ++ P +KEL++NSLDA ++ V ++ Q+ DNG Sbjct: 1 MPIAALPQSTVRAIGSTSVVSDPCSIVKELLDNSLDAGATAVFIEVSQNTVDVIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVS-HLTLMSRPPQN 115 G+TS + P+ +R TSKIS +D S + + GFRGEAL S VS +T+ +R Sbjct: 61 HGITSGDHPLVCKRAFTSKISTVEDLSGLGGKSLGFRGEALASAAEVSGGVTITTRTAAE 120 Query: 116 NTGAQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 G+ + S + + GT V V DLF IP R + K I +I+ Sbjct: 121 PVGSVLKYGRNGDLLSTQRASHPVGTTVRVTDLFKHIPVRRQTVLKGTTKTLARIKKIIQ 180 Query: 174 RMAIAYPKVSFTFSTIK---SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS-- 228 +A P + + ++ + S + + +V G + + + Sbjct: 181 SYVVAQPTIRLSLKVLRASSEKANWVYAPSKDATLKDAGLKVAGTEVASACISRQWPCIS 240 Query: 229 -----------NEITLQGYTGIP----TFNRGNANQFYVFINGRTVQD-KFILSTIRTAY 272 + L P +++ ++ +V ++GR + + I I Y Sbjct: 241 NSNYETGDSNGPTLKLIALLANPEAGLDYSKASSGGQFVSVDGRPLSPTRGIGQEITKLY 300 Query: 273 AETI----PLGRY------PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIR----NFI 318 + Y P + L + D DVNV PAK + F + I + + Sbjct: 301 QSYLRAAASHDDYPRNISDPFLCLHIRCDEACYDVNVEPAKDDVLFEDQEHILSLVADLL 360 Query: 319 IQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 +A K G + K + + + + S T + N +S Sbjct: 361 RDVYGEAPGKAGKRKTPAKGKGRMDNNNDAFHLLLAHKEPVVSSPETVRNDYKPPNFISA 420 Query: 379 NDLLPSDDPTYSEDNDP 395 + L S N+ Sbjct: 421 SSLFHLRRSQKSLPNEQ 437 >gi|118366123|ref|XP_001016280.1| DNA mismatch repair protein, C-terminal domain containing protein [Tetrahymena thermophila] gi|89298047|gb|EAR96035.1| DNA mismatch repair protein, C-terminal domain containing protein [Tetrahymena thermophila SB210] Length = 731 Score = 214 bits (546), Expect = 3e-53, Method: Composition-based stats. Identities = 95/407 (23%), Positives = 167/407 (41%), Gaps = 16/407 (3%) Query: 27 IKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DF 84 +KELIEN LDA SS + + GG + DNG G+ ++ P+ +R TSKI++ D Sbjct: 20 VKELIENCLDAGSSEISVGLVQGGLKQLIVEDNGSGIHKDDFPLLCERFATSKINEFNDL 79 Query: 85 SNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKI--SSVRPVAMNPGTIV 142 ++ +FGFRGEAL SI VS+L + SR P ++ G + + + V GT V Sbjct: 80 QSLVSFGFRGEALASISFVSNLKITSRKPNSDLGYKASFKNGVMLGEEPEAVNCTEGTTV 139 Query: 143 EVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTN 202 +V+DLFF AR L + E + +I + A+ + K+ F F + ++ + + Sbjct: 140 DVQDLFFNYDARRKSL-NVNEEKKRVLKLIGQFAMHHAKLRFKFKSDNQIQFSSHSVLGS 198 Query: 203 GNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDK 262 + I+++ + F + E ++ +G + +FIN R V+ + Sbjct: 199 TELQQ-ITKIADKSFTS--CESESTEYQVKFKGTFSNIGATKKYKE-ITLFINNRLVECE 254 Query: 263 FILSTIRTAYAETIP-----LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 I + +Y G Y L LE++P+ +D NVHP K ++F I Sbjct: 255 SIKKAVERSYQSCYQSIHEEEGGY-FCYLSLEMNPKNLDPNVHPTKKEVKFLFEYEIAKE 313 Query: 318 IIQSIQKAINKKGISTS-SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL 376 I I + + G+ S + SSF N ++ + + K + Sbjct: 314 IESWIFENLKNCGVIKQLSANISQRTSSFETSNVKRSSSSQLYFGSQSNLSKQNSDYYQP 373 Query: 377 STNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTT 423 + + D + + + I+ + Sbjct: 374 TKQIRVDPRDQKITRFFSVESSEDGNNNSNQKNYQSINYIEEQKEEH 420 >gi|159123611|gb|EDP48730.1| DNA mismatch repair protein, putative [Aspergillus fumigatus A1163] Length = 882 Score = 214 bits (545), Expect = 4e-53, Method: Composition-based stats. Identities = 86/353 (24%), Positives = 143/353 (40%), Gaps = 36/353 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + + I + +I P +KEL++NSLDA ++ + I+ Q+ DNG Sbjct: 1 MPIKALPQTTVRAIGSTSVISDPCSIVKELLDNSLDAHATAISVEISQNTVDVIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVS-HLTLMSRPPQN 115 G+ +E+ P +R TSKI+ +D + + GFRGEAL S V +T+ +R + Sbjct: 61 HGIPAEDHPFVCRRAFTSKIATVEDLRKLGGKSLGFRGEALASAAEVCGGVTVTTRVEAD 120 Query: 116 NTGAQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 G ++ S + + GT V V DLF +IP R + KS I +++ Sbjct: 121 PVGFCIKYGRNGELISTQRASHPVGTTVRVTDLFKSIPVRRQTVLKSTAKTVAKIKKIVQ 180 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNG---NFPERISQVIGEDFINNAVELNEKSNE 230 AIA P + + +K+ K N+ G + + +V G + + V Sbjct: 181 SYAIAQPTIRLSLKVLKAANEKANWVFAPGKNASLTDAALKVAGTEVASACVTKPWPCAN 240 Query: 231 -------------ITLQGYTGIP--TFNRGNANQFYVFINGRTVQ-DKFILSTIRTAYAE 274 L P F++ N + ++GR + + I I Y Sbjct: 241 ESGEESRVVNGSSFQLMALLADPGSDFSKVNNAGQFFSVDGRPLSASRGIGQEISKLYKT 300 Query: 275 TI----------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 + P P + L + DVNV PAK + F N + + Sbjct: 301 YLRAAASRSGGFPYISDPFLCLQIRCPEASYDVNVEPAKDDVLFENQQDLLSL 353 >gi|70983714|ref|XP_747384.1| DNA mismatch repair protein [Aspergillus fumigatus Af293] gi|66845010|gb|EAL85346.1| DNA mismatch repair protein, putative [Aspergillus fumigatus Af293] Length = 882 Score = 214 bits (545), Expect = 4e-53, Method: Composition-based stats. Identities = 86/353 (24%), Positives = 143/353 (40%), Gaps = 36/353 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + + I + +I P +KEL++NSLDA ++ + I+ Q+ DNG Sbjct: 1 MPIKALPQTTVRAIGSTSVISDPCSIVKELLDNSLDAHATAISVEISQNTVDVIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVS-HLTLMSRPPQN 115 G+ +E+ P +R TSKI+ +D + + GFRGEAL S V +T+ +R + Sbjct: 61 HGIPAEDHPFVCRRAFTSKIATVEDLRKLGGKSLGFRGEALASAAEVCGGVTVTTRVEAD 120 Query: 116 NTGAQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 G ++ S + + GT V V DLF +IP R + KS I +++ Sbjct: 121 PVGFCIKYGRNGELISTQRASHPVGTTVRVTDLFKSIPVRRQTVLKSTAKTVAKIKKIVQ 180 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNG---NFPERISQVIGEDFINNAVELNEKSNE 230 AIA P + + +K+ K N+ G + + +V G + + V Sbjct: 181 SYAIAQPTIRLSLKVLKAANEKANWVFAPGKNASLTDAALKVAGTEVASACVTKPWPCAN 240 Query: 231 -------------ITLQGYTGIP--TFNRGNANQFYVFINGRTVQ-DKFILSTIRTAYAE 274 L P F++ N + ++GR + + I I Y Sbjct: 241 ESGEESRVVNGSSFQLMALLADPGSDFSKVNNAGQFFSVDGRPLSASRGIGQEISKLYKT 300 Query: 275 TI----------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 + P P + L + DVNV PAK + F N + + Sbjct: 301 YLRAAASRSGGFPYISDPFLCLQIRCPEASYDVNVEPAKDDVLFENQQDLLSL 353 >gi|116195894|ref|XP_001223759.1| hypothetical protein CHGG_04545 [Chaetomium globosum CBS 148.51] gi|88180458|gb|EAQ87926.1| hypothetical protein CHGG_04545 [Chaetomium globosum CBS 148.51] Length = 1072 Score = 214 bits (545), Expect = 4e-53, Method: Composition-based stats. Identities = 91/432 (21%), Positives = 168/432 (38%), Gaps = 57/432 (13%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRV------------------- 42 I+ + ++QI +G++I KEL+ENS DA ++ + Sbjct: 6 TIKAIESSTVHQIQSGQVIVDLCSVAKELVENSFDARATAIGTWLSLPKKAHARRAALVN 65 Query: 43 ------ETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRG 94 + G ++ DNG G+ S +H TSK++ DD S + TFGFRG Sbjct: 66 KATPLADVRFKNQGLDSIEVQDNGLGIASHNYESIALKHYTSKLTSYDDLSELQTFGFRG 125 Query: 95 EALPSIGAVSHLTLMSRPPQN-NTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIP 152 EAL S+ A+S +++ Q+ +++ K+ S V+ GT V V DLF +P Sbjct: 126 EALSSLCALSRFAVVTCTAQDVPRASRLEFETSGKLKSTSVVSGQKGTTVIVEDLFHNLP 185 Query: 153 ARLNF-LKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERI 209 R ++ + E + +++ + A V FT S + +M ST GN E I Sbjct: 186 VRRRELERNIKREWGKVINLLNQYACVQTGVKFTVSQQPTKGKRMVLFSTKGNPTTRENI 245 Query: 210 SQVIGEDFINNAV--------------------ELNEKSNEITLQGYTGIPTF--NRGNA 247 V G +N + + + + E+ + G+ P R Sbjct: 246 INVFGVKTMNALILMDLKLELTPTAGPLNKGKAKASGSATEVRVLGHVSRPAHGEGRQTP 305 Query: 248 NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIR 307 ++ ++NGR Y + P + +++D DVNV P K I Sbjct: 306 DRQMFYVNGRPCGLPQFAKVFNEVYRSY-NASQSPFIFADIQLDTHLYDVNVSPDKRTIL 364 Query: 308 FRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH--LPKYATSLTNT 365 + + + + +S+ + + ++ ++ + + + A ++ +S T Sbjct: 365 LHDQGQMLDNLRESLIELFETQDVTIPVSQAQALKQNPFKTAAGRSWTLTSAQTSSRAAT 424 Query: 366 QEKLFLQENRLS 377 E E+ S Sbjct: 425 VESQRQAESSSS 436 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%) Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 D L I+DQHA+ E+ FE+++ +T + SQ L+ P+ +DL E +I+EH L R Sbjct: 942 DELFIIDQHASDEKYNFERLQ---ATTTVQSQRLVQPKTLDLTALEEEIILEHLPALERN 998 Query: 484 GIKA 487 G Sbjct: 999 GFVV 1002 >gi|209520576|ref|ZP_03269331.1| MutL dimerisation [Burkholderia sp. H160] gi|209498969|gb|EDZ99069.1| MutL dimerisation [Burkholderia sp. H160] Length = 324 Score = 214 bits (544), Expect = 5e-53, Method: Composition-based stats. Identities = 73/224 (32%), Positives = 118/224 (52%) Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 + +T+ P D ++ P LG A Q+H Y+++Q GLVIVD Sbjct: 99 FEARDSATDTTSPYDATPFASRPTPPAFDATDDQPLGFALGQVHGIYVLAQNRHGLVIVD 158 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 HAAHER+++E+ + I Q LL P+ + E + E + L LG Sbjct: 159 MHAAHERILYEQFKHALADRTIAVQPLLIPQTMQADPVEIGTVEEERDTLDALGFDLAVL 218 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 P +AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ ++R+ R Sbjct: 219 SPTTLAIRAVPALLKDADLQALARAVLSDLHAFGGSRVLTERQHELLGTLACHHAVRANR 278 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ EMN LLR+ME + QCNHGRPT+ +L L+D+++LF R Sbjct: 279 RLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLADLDRLFMR 322 >gi|197127288|gb|ACH43786.1| putative postmeiotic segregation increased 2-like 6 [Taeniopygia guttata] Length = 267 Score = 214 bits (544), Expect = 5e-53, Method: Composition-based stats. Identities = 60/228 (26%), Positives = 114/228 (50%), Gaps = 6/228 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR + +++I +G+++ A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 14 IRPIDRGSVHRICSGQVVLSLGTAVKELVENSLDAGATNIDIKLKDHGAELIEVSDNGVG 73 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +HCTSKI D D ++ TFGFRGEAL S+ A+S +T+ + G + Sbjct: 74 VEEENFEGLTLKHCTSKIQDFSDLIHVETFGFRGEALSSLCALSDVTIFTCHKSAKVGTR 133 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + +I+ P+ GT V ++ LF+T+P R F ++ + E + +++ I Sbjct: 134 LVFDHNGRITQKAPLPRQQGTTVSIQQLFYTLPVRHKEFQRNIKKEYAKMVQLLQAYCIV 193 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL 224 V + + + + + + + E I V G+ + + + Sbjct: 194 SKGVRINCTNQVGQGKKTCVISTAGSPSLKENIGAVFGQKQLQSLIPF 241 >gi|320164350|gb|EFW41249.1| DNA mismatch repair protein MLH1 [Capsaspora owczarzaki ATCC 30864] Length = 762 Score = 213 bits (543), Expect = 5e-53, Method: Composition-based stats. Identities = 85/295 (28%), Positives = 134/295 (45%), Gaps = 14/295 (4%) Query: 45 VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGA 102 + GG QI DNG G+ +++ + +RH TSK+ DD +I TFGFRGEAL S+ Sbjct: 2 SVKAGGMKLMQIADNGSGIHLDDLDLVCERHTTSKLERFDDLKSIATFGFRGEALASVTR 61 Query: 103 VSHLTLMSRPPQNNTGAQIAISGEKISS---------VRPVAMNPGTIVEVRDLFFTIPA 153 V+H++++S+ + + EK+ RP A N GTI+ V DLF+ I Sbjct: 62 VAHVSIISKTADAKCAYKAHYADEKLVPPTASDTNARPRPCAGNKGTIITVEDLFYNIST 121 Query: 154 RLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVI 213 R LKS E I DV+ + AI VSFT + G + + + Sbjct: 122 RRKALKSPAEEHAKIVDVVGKYAIHNSGVSFTLKKHGETTAADVRTAAGGTRIDAVRAIY 181 Query: 214 GEDFINNAVELNEKSNEIT--LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTA 271 G +EL+ ++ ++G ++ FIN R V I I T Sbjct: 182 GAQVARELLELDGTEPKLDLVVKGLVSNADYSMPRGTFI-FFINHRLVDCPSIRKAIETV 240 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 YA +P +P V L L + + VDVN+HP K + F + ++ + + ++ + Sbjct: 241 YAAYLPKKTFPFVYLSLLMPGQNVDVNIHPTKKEVHFLHEDVVVETVQKMLEAKL 295 >gi|321253476|ref|XP_003192745.1| ATPase [Cryptococcus gattii WM276] gi|317459214|gb|ADV20958.1| ATPase, putative [Cryptococcus gattii WM276] Length = 1020 Score = 213 bits (542), Expect = 7e-53, Method: Composition-based stats. Identities = 85/431 (19%), Positives = 167/431 (38%), Gaps = 43/431 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + +I++I +G+++ AIKEL+ENSLDA ++ ++ I G ++ DNG Sbjct: 4 SIKAIDTSLIHRIHSGQVVLDLQSAIKELLENSLDAGATAIDVRIKDNGLDSIEVVDNGS 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQ-NNT 117 G+ + RH TSK+ +D + TFGFRGEAL ++ A+ +T+++ + Sbjct: 64 GIAEADWESIALRHHTSKLPSLEDLHKVTTFGFRGEALSALAALCDSVTVVTATKETAPM 123 Query: 118 GA--QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRR 174 GA ++ G I + VA GT V + LF +P R ++ + E + ++ Sbjct: 124 GAVIKLGTDGRTIDTSGRVARPRGTTVTLSGLFGPLPVRRKEFERNAKKEVSKALVLLTA 183 Query: 175 MAIAYPKVSFTFSTIK--------------SNRYKMNFQSTNGNFPERISQVIGE----- 215 A+ S + S R G + V G Sbjct: 184 YALVPASASGQDTRNGVRLKVEMIAGGGRASKRSIHLMTDGKGPLRSSVGAVWGPSALDN 243 Query: 216 -------------DFINNAVELNEKSNEITLQGYTGIPTFNRGNAN--QFYVFINGRTVQ 260 + + E+ + ++G + G + + + +INGR Sbjct: 244 VEDIDLSLEVEIDKVMARREGITERMQTVKVKGLISSAKWGCGFSTSSRQFFYINGRPCN 303 Query: 261 DKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQ 320 + I Y + P+V+L +I VD+NV P K I + + + + Sbjct: 304 LTKVARAINEVYKSF-NTNQLPLVILDFKIPTESVDINVSPDKRTIFVHSEDCLIDSLKT 362 Query: 321 SIQKAINKKGISTSSVLSKKMISSFHQDNAPKT-HLPKYATSLTNTQEKLFLQENRLSTN 379 +++ + + + + + S +D + + + + TQE E + Sbjct: 363 ALESFFAPSRNTFTVEGASRTVKSIRRDQSHTSLKRSQPNEESSQTQEGNASLEGQEGER 422 Query: 380 DLLPSDDPTYS 390 + + + + Sbjct: 423 QIASDVEASEN 433 Score = 133 bits (335), Expect = 7e-29, Method: Composition-based stats. Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 14/199 (7%) Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 + E + I TD L I+DQHA+ E+ FE ++ +TKI +Q Sbjct: 802 ADFEKMEVKGQFNKGFIIARLQSDNGTDDLFIIDQHASDEKYNFETLQ---QTTKIKAQA 858 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFG-PNAIAIREIP----AILSK 506 L+ P + L G+ + ME+ + L+ G + G I++ IP + Sbjct: 859 LIKPRALHLTAGDEIVAMENIDILNANGFDVHVDETKPAGRGERISLLAIPVSKETVFDF 918 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 K++ QLL+ ++ + S + + A+ AC S+ G+ + +M++LLR M Sbjct: 919 KDLEQLLQ-LLSDDSRPSGQMVRCMKARAMFASRACRKSVMIGKTLTKSQMSQLLRNMGT 977 Query: 567 NPNSSQCNHGRPTFIKLKL 585 C HGRPT L Sbjct: 978 IDQPWNCPHGRPTMRHLTQ 996 >gi|224012369|ref|XP_002294837.1| hypothetical protein THAPSDRAFT_264783 [Thalassiosira pseudonana CCMP1335] gi|220969276|gb|EED87617.1| hypothetical protein THAPSDRAFT_264783 [Thalassiosira pseudonana CCMP1335] Length = 919 Score = 213 bits (542), Expect = 7e-53, Method: Composition-based stats. Identities = 84/357 (23%), Positives = 144/357 (40%), Gaps = 31/357 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ +S I QI AG+ I S A+KEL++N++DA+++RV + G Q++DNG Sbjct: 2 TIKPISSTAIQQIVAGQAITDLSSAVKELVDNAIDAKATRVCVKLYNQGLESIQVSDNGT 61 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTG 118 G+ P+ +H TSK+ DD T GFRGEAL + VS LT+ +R ++T Sbjct: 62 GVPKSSRPLMAMKHATSKLREFDDLYTAPTLGFRGEALFCLANVSRSLTVSTRSSDDDTN 121 Query: 119 AQIAISGEKISSV-------------RPVAMNPGTIVEVRDLFFTIPARL-NFLKSEQVE 164 + S + V GT V V LF T+P R + K + + Sbjct: 122 TITSSSNGLGEQFAFNHEGGLISTSVQRVPRGMGTTVVVEGLFETLPVRRVDLCKRIKGQ 181 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIK--------SNRYKMNFQSTNGNFPERISQVIGED 216 + V++ AI F + + + ++ ++ +R + V+G Sbjct: 182 RMKLLRVLQGYAILCLGTQFNLTDVNAPNSKSKCKSDVRLATSESSNTLEQRTASVLGTK 241 Query: 217 FINNAVELN---EKSNEITLQGYTGI---PTFNRGNANQFYVFINGRTVQDKFILSTIRT 270 F++ + + ++G + + + INGR V + + Sbjct: 242 FLSGLTRIEINLHSATRWKMEGLVSHAPTSPHSATARDLQFFSINGRPVDLPTVSRVLGD 301 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 + R P VL + DVN+ P K + F I I + + K + Sbjct: 302 VWRLGSGGRRRPACVLAFTLPNNMYDVNLSPDKREVLFTEEASISELIREGLTKLWS 358 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 93/230 (40%), Gaps = 24/230 (10%) Query: 375 RLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG-LVIVDQHA 433 + + +P ++D+D + Q + +I+++T D L I+DQHA Sbjct: 679 EQNERQQKTNREPQRAQDSDSTVNLSKEDFLRMSIIGQFNLGFILARTPDHNLFILDQHA 738 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA----ER 489 E+ FE++ F T I Q L+ P ++L E +++H E R G + ++ Sbjct: 739 CDEKYNFERL---FKETVIHEQKLIAPLPLELSPSEEHCVLDHMEVFERNGFRFSYDPDK 795 Query: 490 FGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIE--------------- 534 + +++ +P S + + + + + T + E Sbjct: 796 EPRHRLSLTALPHSGSVQFGKEDVGALCAMLGADGTYAGMAGSQEGSIKSVDGILGSSIA 855 Query: 535 -NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + A+ AC GSI G + E +L++++K C HGRPT + Sbjct: 856 IAMFASRACRGSIMIGTALSHKEQMNILKKLDKTDIPWNCAHGRPTMSHI 905 >gi|1465764|gb|AAC52672.1| similar to human MLH1 on chromosome 3p21 [Mus musculus] Length = 151 Score = 212 bits (541), Expect = 1e-52, Method: Composition-based stats. Identities = 60/144 (41%), Positives = 94/144 (65%), Gaps = 3/144 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ V+ GG QI DNG G Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E++ + +R TSK+ +D ++I T+GFRGEAL SI V+H+T+ ++ + Sbjct: 68 IRKEDLDIVCERFTTSKLQTFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAYR 127 Query: 121 IAISGEKIS-SVRPVAMNPGTIVE 143 + S K+ +P A N GT++ Sbjct: 128 ASYSDGKLQAPPKPCAGNQGTLIT 151 >gi|197127289|gb|ACH43787.1| putative postmeiotic segregation increased 2-like 6 [Taeniopygia guttata] Length = 267 Score = 212 bits (539), Expect = 2e-52, Method: Composition-based stats. Identities = 59/228 (25%), Positives = 114/228 (50%), Gaps = 6/228 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR + +++I +G+++ A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 14 IRPIDRGSVHRICSGQVVLSLGTAVKELVENSLDAGATNIDIKLKDHGAELIEVSDNGVG 73 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +HCTSKI D D ++ TFGFRGEAL S+ A+S +T+ + G + Sbjct: 74 VEEENFEGLTLKHCTSKIQDFSDLIHVETFGFRGEALSSLCALSDVTIFTCHKSAKVGTR 133 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + +I+ P+ GT V ++ LF+T+P R F ++ + E + +++ I Sbjct: 134 LVFDHNGRITQKAPLPRQQGTTVSIQQLFYTLPVRHKEFQRNIKKEYAKMVQLLQAYCIV 193 Query: 179 YPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL 224 V + + + + + + + I V G++ + + + Sbjct: 194 SKGVRINCTNQVGQGKKTCVISPAGSPSLKGTIGAVFGQNQLQSLIPF 241 >gi|319790006|ref|YP_004151639.1| DNA mismatch repair protein domain protein [Thermovibrio ammonificans HB-1] gi|317114508|gb|ADU96998.1| DNA mismatch repair protein domain protein [Thermovibrio ammonificans HB-1] Length = 476 Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 88/317 (27%), Positives = 151/317 (47%), Gaps = 34/317 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L +++ +IA+G+I P+ +KELIEN+LDA++S V+ + F+++DNG G Sbjct: 2 IKRLPREVVARIASGQIASSPAAVLKELIENALDAKASEVKVQVETP--FNFRVSDNGIG 59 Query: 63 MTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E+P+AV+R TSKI ++ + ++GFRGEAL +I S L + SR G + Sbjct: 60 IPYRELPLAVERFTTSKIFSVEELERVTSYGFRGEALFAISQFSTLEIKSRHEAEEVGGK 119 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + ++ ++ P+ GT V V +LFF +P R + Q E +L+ + R A+A P Sbjct: 120 LVVTAGEVKEYSPIPFRRGTTVTVSNLFFNVPVRRKA--TSQKERSLMERLTLRYALANP 177 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 V+F F + S ER+ QV +E + + Sbjct: 178 HVTFKF-----GELTLPATS----LKERLIQVTRGKPKFQLIEGDGVTL----------- 217 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 F+R +F+N R V + + + VL +E+ P +VD NV Sbjct: 218 FFSREERGPRELFVNRRPVSVPEVERLLEEFGVK--------AFVLFMELPPEEVDFNVS 269 Query: 301 PAKSYIRFRNPTIIRNF 317 P K + F++ ++ Sbjct: 270 PLKEKVLFKSERGVKAL 286 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 79/212 (37%), Gaps = 32/212 (15%) Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 + ++ V+ ++A I +I+ DQH HER+ +E++ + Sbjct: 291 EGEFNLPKPSVQRAKAEEDTGPIELIGSDGTVLIAHDRKFYYFFDQHLIHERVNYEELLK 350 Query: 446 DFNSTKITSQTLLTPEIIDLL--EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + K+ L+ P + + E A+ + E + + E P + Sbjct: 351 ALFAGKVKKVKLVPPVTVPVTVKEKLDAIHAVYAE------------SEKGLTVYEAPEL 398 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQS-IEMNRLLR 562 ++ + I +L + L+ A++AC ++++G + E+ L Sbjct: 399 ITPEEIKKL------------ESQPLETV-----ASVACRRAVKAGYVFKEFKELESLFN 441 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + +C HGRP + K++ I GR Sbjct: 442 RYLRCAEKERCPHGRPIYYKVRKQVIYSHLGR 473 >gi|242014680|ref|XP_002428013.1| DNA mismatch repair protein pms1, putative [Pediculus humanus corporis] gi|212512532|gb|EEB15275.1| DNA mismatch repair protein pms1, putative [Pediculus humanus corporis] Length = 947 Score = 211 bits (537), Expect = 3e-52, Method: Composition-based stats. Identities = 83/417 (19%), Positives = 179/417 (42%), Gaps = 22/417 (5%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M KL + + + ++I S A+KEL+ENS+DA ++ + G ++ DNG Sbjct: 1 MTFEKLPSATVKLLTSSQVITSVSTAVKELLENSIDAGGKIIQVRLENYGLDLIEVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ + + TSKI +D ++T+GFRGEAL +I +S +++ ++ + Sbjct: 61 LGVSYDNVQKMFLPGYTSKIKQFEDLDTLNTYGFRGEALAAICKLSKVSISTKTSTDTLA 120 Query: 119 AQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPARLNF---LKSEQVETNLITDVIRR 174 I + S +P +N GT + + +LF +P R ++ K + +++ Sbjct: 121 MTYIIDENGVPLSSKPTHLNNGTSITITNLFSNLPVRKSYLSVKKRLGDDLKKTEQIVQS 180 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 +++ +P+++ + K +K N + QV ++ +++ N I ++ Sbjct: 181 LSLIHPELNVSLIHNKCIVWKKNSVKG---LKQSFMQVASLKTVSKMDHISKLINNINIE 237 Query: 235 GYTGIPTFNR------GNANQFYVFINGRTVQDKFILSTIRTAYAETIPL----GRYPVV 284 ++N YV++N R V + I+ +Y +V Sbjct: 238 LIVPKKNLENVDDIFTNSSNGIYVYVNKRPVTCSELSQPIQEHIFYHYSKLNLTYKYSIV 297 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 +L +++ +++DVN+ P K+ I +N + N I + N S+++ + S Sbjct: 298 LLSIDMPSQEIDVNLEPNKTKILLKNKMYLINCIDDILSNYYNNGNFHCSALIEDLVNES 357 Query: 345 F---HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEE 398 F + + +TH S +KL L + ++ + ++ + + V + Sbjct: 358 FTVNNTNEISQTHNDDDEISKERQNKKLKLDVDEITEPVVKKINNDNNANCTESVNK 414 >gi|313222327|emb|CBY39275.1| unnamed protein product [Oikopleura dioica] Length = 152 Score = 211 bits (537), Expect = 3e-52, Method: Composition-based stats. Identities = 60/140 (42%), Positives = 86/140 (61%), Gaps = 2/140 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IRKLS+ +IN+IAAGE+++RP+ AIKELIENS+DA + ++ GG F I D+G Sbjct: 1 MPIRKLSQDVINKIAAGEVVQRPANAIKELIENSIDAGAKSIKIKTKKGGLEMFSIEDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ E++P+A R TSK+ + D +I +FGFRGEAL SI V HLT+ S+P Sbjct: 61 CGIAMEDLPLAGVRFATSKLQEYTDLKDIGSFGFRGEALASISHVGHLTITSKPASQQVA 120 Query: 119 AQIAISGEKISSVRPVAMNP 138 +++ G K + Sbjct: 121 YKLSFDGGKANGESNTFSRK 140 >gi|22204216|emb|CAD43468.1| novel protein similar to human postmeiotic segregation increased 1-like protein (PMSL1) [Danio rerio] Length = 194 Score = 211 bits (537), Expect = 3e-52, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 6/193 (3%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 + L + + + + ++I +KELIENSLDA SS +E + G ++ DNG G+ Sbjct: 2 KALPPETVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + ++ + +H TSKI +D + T+GFRGEAL SI A+S + + ++ ++ Q Sbjct: 62 KATDVSVMAVKHYTSKISCHEDLEQLETYGFRGEALASICAISEVIITTKTVDDDFSIQY 121 Query: 122 AISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 ++ +I S +P + GT V +LF +P R + K + E + +++ A+ Sbjct: 122 SVDHNGQIVSQKPSHLGQGTTVCAANLFKNLPVRRQYYSNTKKCKDELKRVQNLLMAYAV 181 Query: 178 AYPKVSFTFSTIK 190 P++ T S K Sbjct: 182 IKPELRVTLSHNK 194 >gi|156045193|ref|XP_001589152.1| hypothetical protein SS1G_09785 [Sclerotinia sclerotiorum 1980] gi|154694180|gb|EDN93918.1| hypothetical protein SS1G_09785 [Sclerotinia sclerotiorum 1980 UF-70] Length = 912 Score = 211 bits (537), Expect = 3e-52, Method: Composition-based stats. Identities = 87/373 (23%), Positives = 155/373 (41%), Gaps = 35/373 (9%) Query: 27 IKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDF 84 +KEL+ENSLDA ++ ++ G ++ DNG G++ +H TSK+S +D Sbjct: 3 VKELVENSLDAGATSIDVRFKNQGLEAIEVQDNGGGISPHNYDTLALKHHTSKLSTYNDL 62 Query: 85 SNIHTFGFRGEALPSIGAVSHLTLMSR-PPQNNTGAQIAISGE-KISSVRPVAMNPGTIV 142 + + TFGFRGEAL S+ A+S ++++ P G ++ K+ S VA GT V Sbjct: 63 TTLQTFGFRGEALSSLCALSSFSVITCLPENAPKGTKLEFEISGKLKSTSVVAAQKGTTV 122 Query: 143 EVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQST 201 V +LF +P R K+ + E +T V+ + A + FT S + K ST Sbjct: 123 IVENLFNNLPVRRRELEKNIKREWGKVTGVLGQYACIQTGIKFTVSQQAAKGKKTTIFST 182 Query: 202 NGN--FPERISQVIGEDFINNAVELNEK--------------------SNEITLQGYTGI 239 GN E I V G + + ++ + + +I + G+ Sbjct: 183 KGNPTTRENIVNVFGAKTLTQLISMDLRLELEPTSGPGQRWSTGNDGGTKDIRIIGHISR 242 Query: 240 PTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG--RYPVVVLLLEIDPRQV 295 P R ++ +F+N R + Y G + P + +E+D Sbjct: 243 PASGEGRQTPDRQMLFVNSRPCGLPQVAKAFNEVYKSYNGWGSTQSPFIFANIELDTHLY 302 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 DVNV P K I + + + + + A+ + S + + + Q + + Sbjct: 303 DVNVSPDKRTILLHDQSRMLENL----KMALAELFESQDHTMPVSQLPAQKQPQYKQLTI 358 Query: 356 PKYATSLTNTQEK 368 + A ++ T ++ Sbjct: 359 DREAAGVSETSQR 371 >gi|317406928|gb|EFV86990.1| DNA mismatch repair protein [Achromobacter xylosoxidans C54] Length = 237 Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats. Identities = 78/222 (35%), Positives = 131/222 (59%) Query: 373 ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 E+ + + L + + LG+A Q+H YI++Q G+V+VD H Sbjct: 14 EDTAARVEPLRDVAALAPQAAPAPTLPADEEHPLGMALGQLHGIYILAQNRRGMVLVDMH 73 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AAHER+++E+++Q ++ + Q LL P + E + A++ E +E L LG + GP Sbjct: 74 AAHERVVYEQLKQALDARSLPRQDLLVPVVFHAQEKDVAVVEEFEEQLEDLGFQMRPSGP 133 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 +IA+R +PAIL++ +I L R ++ ++ + L ++ +L+TMAC+GS+R+ RK+ Sbjct: 134 TSIAVRSVPAILARGDIETLARAVLRDLAGVGVSRLLTEQRNELLSTMACHGSVRANRKL 193 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME + QCNHGRPT+++ +SD++KLF R Sbjct: 194 TIEEMNGLLRQMEATERADQCNHGRPTWVQWSVSDLDKLFLR 235 >gi|221502098|gb|EEE27844.1| DNA mismatch repair protein, putative [Toxoplasma gondii VEG] Length = 1314 Score = 211 bits (536), Expect = 4e-52, Method: Composition-based stats. Identities = 66/222 (29%), Positives = 99/222 (44%), Gaps = 27/222 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L ++ IAAGE++ RPS A+KEL+EN+LDA SS + + GG ++D+G Sbjct: 240 QIRRLDPSVVQLIAAGEVVLRPSSALKELLENALDARSSSISVSVHNGGFKLLAVSDDGC 299 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + QR TSK+ D ++TFGFRGEAL S+ V + + +R G Sbjct: 300 GIHPQDLTILCQRFTTSKLKALSDLRCMNTFGFRGEALASLAVVGQVDVTTRIASLPHGY 359 Query: 120 QIAISGEKISSVRP-------------------------VAMNPGTIVEVRDLFFTIPAR 154 + + + A + GT + V LF P R Sbjct: 360 RCSYDKGEPILSSDSASSSASASSASSSSTLQVPAGVSVAARSRGTTLRVSRLFHAFPER 419 Query: 155 LNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKM 196 L S Q E DV R AI P + FT + Sbjct: 420 RKMLASPQEEYAKCLDVCMRYAIDNPHIKFTCRRQDKTQTDF 461 Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 46/106 (43%) Query: 228 SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLL 287 ++++ GY + F +FINGR V + ++ Y E +P G V L Sbjct: 675 QCQVSVWGYASRISAGVKPPGTFILFINGRLVDAPALRKSVEGVYQELLPRGLKAWVYLS 734 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 L + P +DVNVHP K ++ + + + ++ + + S Sbjct: 735 LTLPPWLIDVNVHPTKQRVQLLYEDFVAANLAKHFRERLGSQASSQ 780 >gi|307102530|gb|EFN50802.1| hypothetical protein CHLNCDRAFT_28710 [Chlorella variabilis] Length = 235 Score = 211 bits (536), Expect = 4e-52, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 104/198 (52%), Gaps = 5/198 (2%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 +RP+ A+KE++ENSLDA ++++ + GGK+ QI DNG G+ +++P+ QRH TSK+ Sbjct: 2 QRPASALKEMLENSLDAGATQIIVTVKDGGKALLQIQDNGHGIRKDDLPILCQRHTTSKL 61 Query: 81 S--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGE--KISSVRPVAM 136 +D I T GFRGEAL SI V+ L++ + G + + + + RP A Sbjct: 62 REFEDLLGIQTLGFRGEALASISFVARLSVTTMTEGAVHGWRASYTDGVLEAPGPRPTAA 121 Query: 137 NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKM 196 N GT++ V DLF+ +P R LK E I DV+ R A+ VS T R + Sbjct: 122 NRGTLISVEDLFWNVPLRKKALKGVGEEYRHILDVMGRYAVYKAGVSLTCKRQGEARSDL 181 Query: 197 NFQSTNGNFPERISQVIG 214 + + + I V Sbjct: 182 HTLAGASRL-DCIRCVWP 198 >gi|325524965|gb|EGD02892.1| DNA mismatch repair protein [Burkholderia sp. TJI49] Length = 274 Score = 211 bits (536), Expect = 4e-52, Method: Composition-based stats. Identities = 70/200 (35%), Positives = 111/200 (55%) Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 P+ + LG A QIH Y+++Q GLVIVD HAAHER+++E+ + + Sbjct: 73 PIAGTAHDEQPLGFALGQIHGIYVLAQNAHGLVIVDMHAAHERILYEQFKNALADRTVAV 132 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL P + E + E + L LG P +AIR +PA+L ++ L R Sbjct: 133 QPLLLPVSMTATPVEIGTVEEERDTLESLGFDLAVLSPTTLAIRAVPALLKDADLQALAR 192 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 ++ ++ + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCN Sbjct: 193 AVLADLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCN 252 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRPT+ +L L+D+++LF R Sbjct: 253 HGRPTWYQLTLNDLDRLFMR 272 >gi|71006946|ref|XP_758079.1| hypothetical protein UM01932.1 [Ustilago maydis 521] gi|46097153|gb|EAK82386.1| hypothetical protein UM01932.1 [Ustilago maydis 521] Length = 971 Score = 211 bits (536), Expect = 4e-52, Method: Composition-based stats. Identities = 80/371 (21%), Positives = 152/371 (40%), Gaps = 47/371 (12%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR + +++I +G+++ A+KEL+EN+LDA ++ + G F++ DNG G Sbjct: 23 IRAIPSHDVHRITSGQVVLDLQTAVKELVENALDASATNIAVNFRDYGADSFEVVDNGTG 82 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTGA 119 + + +H TSK+S D S + TFGFRGEAL S+ A++ +T+ + G Sbjct: 83 IDASNYANVALKHYTSKLSSFSDLSLVRTFGFRGEALSSLCALAKVTIHTATSDQAPMGT 142 Query: 120 --QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMA 176 Q+ SG+ S A GT + V LF +P R K+ + E ++++ A Sbjct: 143 ILQLGKSGKVESDTGRAARQRGTTIIVEGLFKVLPVRRKEFEKNLKREYTKTQNLLQAYA 202 Query: 177 IAYPKVSFTFSTI-----KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN------ 225 + V +T + K+ ++ +N +++ +S + G + + LN Sbjct: 203 LITKGVRWTSTNTPAGGRKTPQFSVNSSTSDNYLSANVSALFGAKVVPTLMPLNLELTFS 262 Query: 226 ---------------------------EKSNEITLQGYTGIPTF--NRGNANQFYVFING 256 ++S+ + + G P R ++++ + +ING Sbjct: 263 VARSPNKLIQHTVEAHGDNDDEEILPGDESSTVNVMGLISKPIHGSGRTSSDRQFFYING 322 Query: 257 RTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRN 316 R + Y +P V + DVN+ P K I + Sbjct: 323 RPWDAGRVGRAFNEVYKSYNSNH-FPFVAADFRLPTDSYDVNITPDKRTIFLHEENRLIE 381 Query: 317 FIIQSIQKAIN 327 + Q++++ Sbjct: 382 KVKQALEELFA 392 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 63/315 (20%), Positives = 105/315 (33%), Gaps = 25/315 (7%) Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 ++ + HP + + S + A +K + S ++ + I SF D Sbjct: 631 DMSSEEDLEFDHPVAQVAAIDDDQVECADEPLSNKFASMRKDAAVSDLIEHEQIISFDLD 690 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 + L + S + T L E + + + Sbjct: 691 RLQQRLLQRRTPSWS-TPSGLPASEREELLQGAGVENQDEAQVERALSRVIHKDDFAAME 749 Query: 409 ACAQIHQNYII----------SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 Q + +II S D L IVDQHA+ E+ FE ++ I SQ L+ Sbjct: 750 VIGQFNLGFIIARRRTRPDSSSHDMDDLFIVDQHASDEKFNFETLQLTTQ---IRSQKLI 806 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERF-----GPNAIAIREIPAILSKKNIPQLL 513 P ++L + + +EH E L G G A + P + + L Sbjct: 807 VPRPLELSASDELVAIEHQETLLSNGFDISVSETGLPGTRAKLV-AQPISKATVFGVKDL 865 Query: 514 RDIIDEIIDSSTTY-----TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 +++ + D+S + + A+ AC SI G + M +L M Sbjct: 866 EELLYLLRDTSAGSEAARSIRCSKARAMFASRACRKSIMIGTALTRGRMKSVLNNMGTIE 925 Query: 569 NSSQCNHGRPTFIKL 583 C HGRPT L Sbjct: 926 QPWNCPHGRPTMRHL 940 >gi|134109737|ref|XP_776418.1| hypothetical protein CNBC4730 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259094|gb|EAL21771.1| hypothetical protein CNBC4730 [Cryptococcus neoformans var. neoformans B-3501A] Length = 1018 Score = 210 bits (535), Expect = 5e-52, Method: Composition-based stats. Identities = 87/415 (20%), Positives = 170/415 (40%), Gaps = 43/415 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + +I++I +G+++ AIKEL+ENSLDA ++ ++ I G ++ DNG G Sbjct: 5 IKAIDTSLIHRIHSGQVVLDLQSAIKELLENSLDAGATAIDVRIKDNGLDSIEVVDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQ-NNTG 118 + + RH TSK+ +D + TFGFRGEAL ++ A+ +T+++ + G Sbjct: 65 IAEADWESIALRHHTSKLPSLEDLHKVTTFGFRGEALSALAALCDSITVVTATKETAPMG 124 Query: 119 A--QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRM 175 A ++ G I + VA GT V + LF +P R ++ + E + ++ Sbjct: 125 AVIKLGKDGRTIETSGRVARPRGTTVTLSGLFNPLPVRRKEFERNAKKEVSKALVLLTAY 184 Query: 176 AIAYPKVSFTFSTIK--------------SNRYKMNFQSTNGNFPERISQVIGEDFINNA 221 A+ S + S R G + V G ++N Sbjct: 185 ALVPASASVQDARNGVRLKVELTAGGGRASKRSIHLMTDGRGQLRSSVGAVWGPSALDNV 244 Query: 222 VELN------------------EKSNEITLQGYTGIPTFNRGNAN--QFYVFINGRTVQD 261 ++N E++ + ++G + G + + + +INGR Sbjct: 245 EDINLRLEVEIDRVMARREGITERTQTVEVKGLISSAQWGCGFSTSSRQFFYINGRPCNL 304 Query: 262 KFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 + I Y + P+ +L +I VD+NV P K I + + + + + Sbjct: 305 TKVARAINEVYKSF-NTNQLPLAILDFKIPTESVDINVSPDKRTIFVHSEDCLIDSLKTA 363 Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDN-APKTHLPKYATSLTNTQEKLFLQENR 375 ++ + + + + I S +D+ P + + ++ TQ++ E + Sbjct: 364 LESFFAPSRNTFTVEGASRTIKSVRRDHSHPSLKQSQRSQAINQTQQEDASLEEQ 418 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 63/311 (20%), Positives = 127/311 (40%), Gaps = 29/311 (9%) Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 + P ++ + I++ + Q ++ + S+ ++I F K Sbjct: 692 STSCDPQRTSASSSSSPIVKPRVSQRLKPDKAYRDEIISTAPQGEVIMRFDLSRLRK--- 748 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-----EATHYQLGIAC 410 ++A + + ++L L ++D++ EE+ ++ Sbjct: 749 -RFANAGNRQAGAQSKRVSQLVKQGDLEEAAGIKNKDSELAEETLSRVISKADFEKMEVK 807 Query: 411 AQIHQNYIISQTT------DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 Q ++ +II++ D L I+DQHA+ E+ FE ++ +TKI +Q L+ P + Sbjct: 808 GQFNKGFIIARLQSTDNGTDDLFIIDQHASDEKYNFETLQ---QTTKIKAQALIKPRALH 864 Query: 465 LLEGECALIMEHDEDLHRLGIKA-----ERFG-PNAIAIREIP----AILSKKNIPQLLR 514 L G+ + ME+ + L+ G + G I++ +P + K++ QLL Sbjct: 865 LTAGDEIVAMENIDILNANGFDVHVDESKPAGKGERISLLAMPVSKETVFDFKDLEQLLH 924 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 ++ + S + + A+ AC S+ G+ + +M++LLR M C Sbjct: 925 -LLSDDSRPSGQMVRCMKARAMFASRACRKSVMIGKTLTKGQMSQLLRNMGTIDQPWNCP 983 Query: 575 HGRPTFIKLKL 585 HGRPT L Sbjct: 984 HGRPTMRHLTK 994 >gi|325115323|emb|CBZ50878.1| putative DNA mismatch repair protein [Neospora caninum Liverpool] Length = 1141 Score = 210 bits (535), Expect = 5e-52, Method: Composition-based stats. Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 22/217 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IRKL ++ +IAAGE++ RPS A+KEL+EN +DA SS + + GG ++D+G Sbjct: 62 RIRKLDLSVVQRIAAGEVVLRPSSALKELLENCMDARSSSISVTVQNGGFKLLAVSDDGC 121 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E++P+ R TSK+ D + TFGFRGEAL S+ V H+ + +R G Sbjct: 122 GIYPEDLPILCHRFTTSKMKSLADLRCMRTFGFRGEALASLSVVGHVEVTTRIASLPHGY 181 Query: 120 QIAISGEKISSVRPVAMNP--------------------GTIVEVRDLFFTIPARLNFLK 159 + + + V + GT + V LF P R L Sbjct: 182 RCSYDKGEPVLSSSVPASHSVSSGSSPVPAGVSVAARSRGTTLRVSQLFHAFPERRKMLA 241 Query: 160 SEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKM 196 S Q E + +V R AI P + FT + + Sbjct: 242 SPQEEYSKCLEVCTRYAIDNPHIKFTCKRQDKTQADL 278 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 47/117 (40%) Query: 223 ELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYP 282 E + ++++ GY + F +FIN R V + +I Y E +P G Sbjct: 518 EEQRNACKVSVWGYASRVSAGAKPPGTFILFINSRLVDAPALRKSIEGVYQELMPRGLKA 577 Query: 283 VVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK 339 V L + VDVNVHP K ++ + + + ++ + + S + + Sbjct: 578 WVYLSFSLPAWLVDVNVHPTKQRVQLLYEDFVAAHLSRHFRERLGSQTSSQIFDVQR 634 >gi|167571112|ref|ZP_02363986.1| DNA mismatch repair protein [Burkholderia oklahomensis C6786] Length = 303 Score = 210 bits (534), Expect = 7e-52, Method: Composition-based stats. Identities = 76/249 (30%), Positives = 117/249 (46%) Query: 346 HQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 +D T +L R +T + Sbjct: 53 RKDTGAGTPQGTTGAALEAHDAPDAHNPPRFATMPGGAGAATPAFSATSASDPMTHDEQP 112 Query: 406 LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 LG A QIH Y+++Q GLVIVD HAAHER+++E+ ++ + QTLL P + Sbjct: 113 LGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTVAVQTLLIPVSMTA 172 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 E E E L LG P +AIR +PA+L ++ L R ++ ++ Sbjct: 173 TPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLADLHAFGG 232 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRPT+ +L L Sbjct: 233 SRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTL 292 Query: 586 SDIEKLFGR 594 D+++LF R Sbjct: 293 GDLDRLFMR 301 >gi|167586246|ref|ZP_02378634.1| DNA mismatch repair protein [Burkholderia ubonensis Bu] Length = 209 Score = 209 bits (533), Expect = 8e-52, Method: Composition-based stats. Identities = 70/196 (35%), Positives = 109/196 (55%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 + LG A QIH Y+++Q GLVIVD HAAHER+++E+ + + Q LL Sbjct: 12 TAYDDQPLGFALGQIHGIYVLAQNAHGLVIVDMHAAHERILYEQFKHALADRSVAVQALL 71 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P ++ E + E E L LG P +AIR +PA+L ++ L R ++ Sbjct: 72 LPVSMNATPVEIGTVEEERETLESLGFDLAVLSPTTLAIRAVPALLKDADLQSLARAVLA 131 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRP Sbjct: 132 DLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRP 191 Query: 579 TFIKLKLSDIEKLFGR 594 T+ +L L D+++LF R Sbjct: 192 TWYQLTLGDLDRLFMR 207 >gi|312215556|emb|CBX95508.1| hypothetical protein [Leptosphaeria maculans] Length = 750 Score = 209 bits (532), Expect = 9e-52, Method: Composition-based stats. Identities = 95/427 (22%), Positives = 168/427 (39%), Gaps = 24/427 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I LS QI +G+++ PS +KELI+N+LDA + + IA Q+ D+G G Sbjct: 12 IAALSPTTARQIGSGQVLVDPSSIVKELIDNALDARAKSIFVDIATNAIDTIQVKDDGHG 71 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNI--HTFGFRGEALPSIGAV-SHLTLMSRPPQNNT 117 + S++ P+ +R+CTSKI D D I GFRGEAL S+ + S + + +R Sbjct: 72 IPSQDRPLVCRRYCTSKIRDLQDLRGIGGKWLGFRGEALSSVAEMSSSILVTTRVEGEPV 131 Query: 118 GAQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRM 175 + ++ +V + GT V+V +F IP R K+ I +++ Sbjct: 132 AVKLKFQRSGELDNVERESHPVGTTVKVTGIFEHIPVRKQTALKNASKCLAKIRHLLQGY 191 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNG---NFPERISQVIGEDFINNAVELNEKSNEIT 232 A P V F +K+ K NF + + +V+G+D ++ Sbjct: 192 TFARPAVRFRLRVLKAKSDKSNFVYAPSSIVSIEDAAMKVVGKDCTLQCDWTALQAEGFE 251 Query: 233 LQGYTGIPTF--NRGNANQFYVFINGRTVQDKFIL-STIRTAYAETI-------PLGRYP 282 + + PT ++ + + +V I+GR + + + TA+ + + P Sbjct: 252 IHAFLPKPTAIGSKVSNHGAFVSIDGRPISSRRGTVKQMVTAFKARLRKMSPSVSCVKDP 311 Query: 283 VVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI 342 + + + P D N+ PAK + F N +I + + +N T+ V + + Sbjct: 312 FICVNIVCPPDSYDPNIEPAKDDVMFENDEVILD----VFNRLLNTYYPETAMVPANGNL 367 Query: 343 SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 Q T TQE + P + ++E + Sbjct: 368 PVSAQQRQSAEAEVLPRRMCTPTQEHDADSNPIDGASASDSHGQPPWRSSMYGIDEDDMH 427 Query: 403 HYQLGIA 409 Q G Sbjct: 428 FIQDGQP 434 >gi|256077973|ref|XP_002575273.1| DNA mismatch repair protein PMS2 [Schistosoma mansoni] gi|238660507|emb|CAZ31506.1| DNA mismatch repair protein PMS2, putative [Schistosoma mansoni] Length = 808 Score = 209 bits (532), Expect = 1e-51, Method: Composition-based stats. Identities = 89/394 (22%), Positives = 161/394 (40%), Gaps = 69/394 (17%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +L + ++++I +G+++ + A+KEL+ENS+DA+SS++E + G G ++ DNG Sbjct: 10 TISRLDKNLVHKICSGQVVVTLASAVKELLENSIDAKSSKIEIRLRGHGSESIEVIDNGV 69 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E+ ++CTSK+S DD S + T+GFRGEAL S+ ++ +T+ + G Sbjct: 70 GIREEDFEGLTGKYCTSKLSTFDDLSCVETYGFRGEALSSLCHLAKVTIHTCALNAKIGT 129 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI---RRM 175 ++ +I+ R +A + GT V V LF+ +P R L +VI Sbjct: 130 KLEFDSSGQITDSRSLARSQGTTVCVNQLFYDLPVRRRHLTDPNRLPKEFAEVISLLTAY 189 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVELNEKS----- 228 + V + S I +N S + + IS V G ++N VEL + Sbjct: 190 CLVSIGVQISCSRIGKKGELINVISNGPSISLKDNISAVFGHAQLDNLVELEQIDTIPED 249 Query: 229 -------------NEITLQGYTGIPT--------------------------FNRGNANQ 249 + I + GY P ++ + Sbjct: 250 ICEEFNIKSSSIGHSIKISGYVSKPPDPSTNTSSLIGNSSPSPLLANKRRTSIGYSSSER 309 Query: 250 FYVFINGRTVQDKFILSTIRTAYAET-------------IPL----GRYPVVVLLLEIDP 292 +++INGR I + +P +PV++LL + Sbjct: 310 QFIYINGRPCDLPKITRLATDLWRRCSKEAYSSITSGISLPNRSTTSTFPVLILLFTMPT 369 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 + VD+N+ P K + + + + K + Sbjct: 370 QSVDINLTPDKRTLLLHHENYVMALAKAVLVKTL 403 Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats. Identities = 63/397 (15%), Positives = 143/397 (36%), Gaps = 57/397 (14%) Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL-LLEIDPRQV 295 + + + +Q + N + D+ ++ + T + PV + + V Sbjct: 411 ISSLSQTKIDFDQSQIVTNCDQLNDESQVNCVSTPIHK---RHSSPVSDISCVSPKRESV 467 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI----------------------------- 326 D+N+ P K + + + + K + Sbjct: 468 DINLTPDKRTLLLHHENYVMALTKAVLVKTLFNSSGMDISSLSQTKIDFDQSQIVTNCDQ 527 Query: 327 ----NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTN-DL 381 ++ + + L ++ ++ + Y+ ++N L+ N + D Sbjct: 528 LNDESQVNCFSDNNLQSIEVNFSMENLRNQWKQILYSIPISNNDNNLYNIPNTTDNSIDD 587 Query: 382 LPSDDPTYSEDNDPVEESEATH----------YQLGIACAQIHQNYIISQTTDGLVIVDQ 431 ++ +E EA + + Q + +II+Q L I+DQ Sbjct: 588 KHIEENIMFGKFTSIENQEAENELTTYFKKETFNSLKVIGQFNLGFIIAQHNQDLFIIDQ 647 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA---- 487 HA+ E+ FE++ + + SQ L+ P+ ++L +++ + + R G Sbjct: 648 HASDEKYRFEQL---SENYRFKSQPLVVPQKLNLTITNEQVLINNLDVFARNGFAFRIHS 704 Query: 488 -ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 E G I++ P + +K + + +++ + ++ R+ +ILA+ +C ++ Sbjct: 705 DEPAGQQ-ISLVAAPMLENKLFSYRDIEEMLFVLSETCNKKCRPSRLRDILASRSCRSAV 763 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 G + +M R+L M + C HGRPT L Sbjct: 764 MIGTALDHKKMKRILTNMGSMDHPWNCPHGRPTMRHL 800 >gi|126642160|ref|YP_001085144.1| methyl-directed mismatch repair enzyme [Acinetobacter baumannii ATCC 17978] gi|126388044|gb|ABO12542.1| methyl-directed mismatch repair enzyme [Acinetobacter baumannii ATCC 17978] Length = 160 Score = 209 bits (532), Expect = 1e-51, Method: Composition-based stats. Identities = 67/157 (42%), Positives = 98/157 (62%), Gaps = 4/157 (2%) Query: 20 IERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 IERPS +KEL+ENS+DA ++ + IA GG + +I DNG G+ +++P+AV RH TSK Sbjct: 2 IERPSSVVKELLENSIDAGATELIVRIAQGGSTLIEIIDNGHGIHPDDLPLAVMRHATSK 61 Query: 80 I--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAIS--GEKISSVRPVA 135 I ++D I + GFRGEAL SI AVS LTL S ++ G Q+ ++ V+ VA Sbjct: 62 IKTAEDLHAIVSLGFRGEALASIAAVSRLTLTSSQDESGIGHQVEVNGTAFDHQQVQAVA 121 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 GT + V+DLFF +PAR FLK++ + ++ + Sbjct: 122 AQKGTHIRVQDLFFNVPARRKFLKNQPLNLGILKKLY 158 >gi|260223095|emb|CBA33316.1| hypothetical protein Csp_B18440 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 206 Score = 209 bits (532), Expect = 1e-51, Method: Composition-based stats. Identities = 74/203 (36%), Positives = 113/203 (55%), Gaps = 7/203 (3%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF-------NSTK 451 + + LG A AQ+ YI+++ GLVIVD HAAHER+++E+++Q Sbjct: 2 ASEEAWPLGRAIAQLQGVYILAENNQGLVIVDMHAAHERIVYERLKQQISLTAPDGTVHP 61 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + SQ LL P E A H L+ LG++ F P +A+R +P L++ + + Sbjct: 62 LASQPLLIPATFAATPDEVATAEAHVATLNTLGLEISPFSPKTLAVRAVPTTLAQGDAVE 121 Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 L R ++ E+ + +Q IL TMAC+G++R+ RK+ EMN LLR+ME S Sbjct: 122 LARSVLAELAQHDASTVIQRAQNEILGTMACHGAVRANRKLTLEEMNALLRDMEATERSD 181 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+ +L L +++ LF R Sbjct: 182 QCNHGRPTWRQLTLKELDSLFLR 204 >gi|312385621|gb|EFR30068.1| hypothetical protein AND_00556 [Anopheles darlingi] Length = 878 Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats. Identities = 87/350 (24%), Positives = 154/350 (44%), Gaps = 40/350 (11%) Query: 16 AG-EIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 AG ++ +IA+KEL+ENSLDA ++ VE + G ++ DNG G+ + + Sbjct: 24 AGDTVVLNLAIAVKELVENSLDAGATLVEVKLREHGSELVEVADNGSGVEEKNFEGLTAK 83 Query: 75 HCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA-ISGEKISSV 131 + TSK+ + D +I TFGFRGEAL S+ A+S + +++R N ++ +I Sbjct: 84 YHTSKLKEFTDLESIETFGFRGEALSSLCALSDMVIVTRHSTANHATKLTLNHEGRIQRK 143 Query: 132 RPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 P A GT V + +LF T+P R F ++ + E + +++ + V + Sbjct: 144 EPCARPVGTTVTLTNLFSTLPVRKKEFQRNIKREFLRMCQILQAYCLVSVGVRIICTNQS 203 Query: 191 SNRYKMNFQSTNGNFP--ERISQVIGEDFINNAVE------------------------- 223 + K ST G+ + ++ + G + +E Sbjct: 204 AKGAKSVIMSTPGSQRVLDNVTALFGPRQTADLLELKPAIGSNGKIQDLDESDFDESLAL 263 Query: 224 -----LNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 N ++ T++GY R + ++ + F+N R + + I I AY Sbjct: 264 TQEEVDNFNLSQYTIEGYISSCAHGAGRSSKDRQFYFVNSRPCEPRQISKLINDAYHRY- 322 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 + + P V L L++D +VDVN+ P K + II + +SI+K Sbjct: 323 NVHQQPFVYLNLKLDRSEVDVNLTPDKRMVLMNKEKIIMLAVRKSIKKTF 372 Score = 153 bits (387), Expect = 7e-35, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 7/198 (3%) Query: 390 SEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + +N+ E + Q + +I+ + D L IVDQHA E+ FE +++ Sbjct: 669 AAENELQTEITKADFAAMKIVGQFNLGFIVCRLGDDLFIVDQHATDEKYNFEDLQRT--- 725 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG----PNAIAIREIPAILS 505 T + +Q L+ P+ ++L +++++ + G K E G + + P + Sbjct: 726 TVLQNQRLVVPQPLELTAVNEMVLIDNLDVFEMNGFKFEIDGAAATTRKVRLIAKPFSRN 785 Query: 506 KKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 + + + ++I + D+ T R+ + A+ AC S+ G + EM RL+R M Sbjct: 786 WEFGKEDIDELIFMLQDAPGTVCRPSRVRAMFASRACRKSVMIGTALSVREMERLVRHMG 845 Query: 566 KNPNSSQCNHGRPTFIKL 583 + C HGRPT L Sbjct: 846 EIEQPWNCPHGRPTMRHL 863 >gi|119484968|ref|XP_001262126.1| DNA mismatch repair protein, putative [Neosartorya fischeri NRRL 181] gi|119410282|gb|EAW20229.1| DNA mismatch repair protein, putative [Neosartorya fischeri NRRL 181] Length = 888 Score = 208 bits (530), Expect = 2e-51, Method: Composition-based stats. Identities = 86/353 (24%), Positives = 141/353 (39%), Gaps = 36/353 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + + I + +I P +KEL+ENSLDA ++ + I+ Q+ DNG Sbjct: 1 MPITALPQTTVRAIGSTSVISDPCSIVKELLENSLDAHATAIFIEISQNTVDVIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVS-HLTLMSRPPQN 115 G+ SE+ P +R TSKI+ +D + + GFRGEAL S V +T+ +R + Sbjct: 61 HGIPSEDHPFVCRRAFTSKIATVEDLRKLGGKSLGFRGEALASAAEVCGGVTVTTRVEAD 120 Query: 116 NTGAQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 G ++ S + + + GT V V DLF IP R + KS I +I+ Sbjct: 121 PVGFCIKYGRNGELISTQRASHSVGTTVRVTDLFKNIPVRRQTVLKSAAKTIAKIKKIIQ 180 Query: 174 RMAIAYPKVSFTFSTI---KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS-- 228 AIA P + + + + N + + +V G + + V Sbjct: 181 SYAIAQPTIRLSLKVLKAAGEKANWVYAPGKNASLMDAALKVAGTEAASACVTKQWPCGS 240 Query: 229 -----------NEITLQGYTGIP--TFNRGNANQFYVFINGRTVQ---------DKFILS 266 + L P F++ N + ++GR + K + Sbjct: 241 ESDEESGSGNDSSFQLMALLADPGSDFSKVNNAGQFFSVDGRPLSASRGIGQEISKLYKT 300 Query: 267 TIRTAY--AETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 +R A + +P P + L + DVNV PAK + F N + + Sbjct: 301 YLRAAASRSGGLPNISDPFLCLQIRCPEACYDVNVEPAKDDVLFENQRDLLSL 353 >gi|213019775|ref|ZP_03335578.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994605|gb|EEB55250.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 124 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 58/112 (51%), Positives = 77/112 (68%), Gaps = 1/112 (0%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L K IN+IAAGE+IERP+ +KEL+EN++DA SS +E I GG++ +TDNG Sbjct: 1 MAIILLDTKTINRIAAGEVIERPASVVKELVENAIDAGSSEIEIKIESGGRNLITVTDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSR 111 G+ E++ +A RH TSK+SD + I GFRGEALPSI AVS + L S+ Sbjct: 61 NGIEKEDLELAFMRHATSKLSDGELIEIRHLGFRGEALPSIAAVSRMKLSSK 112 >gi|331216403|ref|XP_003320881.1| postmeiotic segregation increased 2 nirs [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309299871|gb|EFP76462.1| postmeiotic segregation increased 2 nirs [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 997 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 79/409 (19%), Positives = 150/409 (36%), Gaps = 27/409 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR + + +I + +++ A+KEL+ENSLDA ++ ++ G F+++DNG Sbjct: 95 TIRAIDSHSVQKITSSQVVVDLQTAVKELVENSLDAGATIIDVKFKNYGLESFEVSDNGT 154 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ-NNTG 118 G+ +++ H TSKIS DD + + TFGFRGEAL S+ A++ +T+ S G Sbjct: 155 GIREQDLDTVGLNHHTSKISSFDDLAQVKTFGFRGEALSSLCALAKVTVQSATAATEPRG 214 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + + P + V F I K +++ A Sbjct: 215 WILEFDKMGKVTSKKTCSRPPKGI-VTQFFVKIKTFQFQTKCNSQIKQNFSNIFTPKAC- 272 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 R+K+ V+ + + + ++G Sbjct: 273 ------NMMVDLELRFKVKPD----------RTVLRALGLPIDSTSEDLGTTVLVKGLMS 316 Query: 239 IPTFNR--GNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P + + ++ + +INGR I + Y + +YPV++ + D Sbjct: 317 RPAHGQGRNSPDRQFYYINGRPFTPSKISKCVNEVYKQF-NTNQYPVLLANFILPSDSYD 375 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQ--KAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 +N+ P K I + + + + + + + S + + S N + Sbjct: 376 LNIDPNKRSIFLHSEGNLIEALRRKTSAVQTVADQDQHDQSEIGSQPCDSLDSLNHKRPR 435 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATH 403 L + A S N F E D L +++S + H Sbjct: 436 LDETAMSSQNVTIDNFPSE-VTEGKDTLCKAISPSPPHETFLDKSPSHH 483 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 19/189 (10%) Query: 400 EATHYQLGIACAQIHQNYII------SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 + ++ Q + +II +TD L IVDQHA+ E+ FEK+++ TK+T Sbjct: 793 QKADFEHMEIIGQFNLGFIIVRRIDEKHSTDDLFIVDQHASDEKFNFEKLQR---ETKLT 849 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 Q LL + L ++ ++ ++G + + P + L Sbjct: 850 GQRLLMYDPSSLCRELNGFSVQ-VDESAKVG--------ERVKLLAQPVSGNTSWDVSDL 900 Query: 514 RDIIDEIIDSSTTYTL-QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 +++ I + + + + ++A+ AC S G + +M R++ +M Sbjct: 901 GELLHLITERGSNEVVRPSKTRRMMASRACRMSTMIGDSLTVKQMARIVSQMGTMDQPWA 960 Query: 573 CNHGRPTFI 581 C HGRPT Sbjct: 961 CPHGRPTMR 969 >gi|167825659|ref|ZP_02457130.1| DNA mismatch repair protein [Burkholderia pseudomallei 9] Length = 439 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 73/196 (37%), Positives = 108/196 (55%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 LG A QIH Y+++Q GLVIVD HAAHER+++E+ ++ I QTLL Sbjct: 242 PMHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTIAVQTLL 301 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P + E E E L LG P +AIR +PA+L ++ L R ++ Sbjct: 302 IPVSMTATPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLA 361 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 ++ + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRP Sbjct: 362 DLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRP 421 Query: 579 TFIKLKLSDIEKLFGR 594 T+ +L L D++KLF R Sbjct: 422 TWYQLTLGDLDKLFMR 437 Score = 90.5 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 65/107 (60%) Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 + + G G+PT +RG A+Q Y F+NGR V+DK + +R AY + + RYP VL L+ Sbjct: 7 PLAVYGCAGLPTASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLD 66 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 + P VDVNVHP+K +RFR+ I F+ ++Q+A+ + ++ Sbjct: 67 LPPEAVDVNVHPSKIEVRFRDSRSIHQFVFHAVQRALARHAGASPET 113 >gi|58736993|dbj|BAD89405.1| PMS1 nirs variant 8 [Homo sapiens] Length = 234 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 9/230 (3%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK 227 P + F K+ ++ +S + + V+G +NN Sbjct: 182 LKPDLRIVFVHNKAVIWQ---KSRVSDHKMALMSVLGTAVMNNMESFQYH 228 >gi|167563964|ref|ZP_02356880.1| DNA mismatch repair protein [Burkholderia oklahomensis EO147] Length = 232 Score = 208 bits (529), Expect = 3e-51, Method: Composition-based stats. Identities = 73/222 (32%), Positives = 111/222 (50%) Query: 373 ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 R +T LG A QIH Y+++Q GLVIVD H Sbjct: 9 PPRFATMPGGAGAATPAFSAMSASAPMTHDEQPLGFAVGQIHGIYVLAQNARGLVIVDMH 68 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 AAHER+++E+ ++ + QTLL P + E E E L LG P Sbjct: 69 AAHERILYEQFKRALADRTVAVQTLLIPVSMTATPVEVGTAEEERETLDALGFDLAVLSP 128 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKM 552 +AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ ++R+ R++ Sbjct: 129 TTLAIRAVPALLKDADLQALARAVLADLHAFGGSRVLTERQHELLGTLACHHAVRANRRL 188 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EMN LLR+ME + QCNHGRPT+ +L L D+++LF R Sbjct: 189 TLDEMNALLRQMEATERADQCNHGRPTWYQLTLGDLDRLFMR 230 >gi|167837739|ref|ZP_02464622.1| DNA mismatch repair protein [Burkholderia thailandensis MSMB43] Length = 274 Score = 207 bits (528), Expect = 3e-51, Method: Composition-based stats. Identities = 72/194 (37%), Positives = 108/194 (55%) Query: 401 ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 LG A QIH Y+++Q GLVIVD HAAHER+++E+ ++ + QTLL P Sbjct: 79 HDEQPLGFAVGQIHGIYVLAQNARGLVIVDMHAAHERILYEQFKRALADRTVAVQTLLIP 138 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEI 520 + E E E L LG P +AIR +PA+L ++ L R ++ ++ Sbjct: 139 VSMTATPVEVGTAEEERETLDALGFDLAVLSPTTLAIRAVPALLKDADLQALARAVLADL 198 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + L +R +L T+AC+ ++R+ R++ EMN LLR+ME + QCNHGRPT+ Sbjct: 199 HAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERADQCNHGRPTW 258 Query: 581 IKLKLSDIEKLFGR 594 +L L D++KLF R Sbjct: 259 YQLTLGDLDKLFMR 272 >gi|58264774|ref|XP_569543.1| ATPase [Cryptococcus neoformans var. neoformans JEC21] gi|57225775|gb|AAW42236.1| ATPase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 939 Score = 207 bits (527), Expect = 4e-51, Method: Composition-based stats. Identities = 93/433 (21%), Positives = 170/433 (39%), Gaps = 45/433 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + +I++I +G+++ AIKEL+ENSLDA ++ ++ I G ++ DNG G Sbjct: 5 IKAIDTSLIHRIHSGQVVLDLQSAIKELLENSLDAGATAIDVRIKDNGLDSIEVVDNGSG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQ-NNTG 118 + + RH TSK+ +D + TFGFRGEAL ++ A+ +T+++ + G Sbjct: 65 IAEADWESIALRHHTSKLPSLEDLHKVTTFGFRGEALSALAALCDSITVVTATKETAPMG 124 Query: 119 A--QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRM 175 A ++ G I + VA GT V + LF +P R ++ + E + ++ Sbjct: 125 AVIKLGKDGRTIETSGRVARPRGTTVTLSGLFNPLPVRRKEFERNAKKEVSKALVLLTAY 184 Query: 176 AIAYPKVSFTFSTIK--------------SNRYKMNFQSTNGNFPERISQVIGEDFINNA 221 A+ S + S R G + V G ++N Sbjct: 185 ALVPASASVQDARNGVRLKVELTAGGGRASKRSIHLMTDGRGQLRSSVGAVWGPSALDNV 244 Query: 222 VELN------------------EKSNEITLQGYTGIPTFNRGNAN--QFYVFINGRTVQD 261 ++N E+ + ++G + G + + + +INGR Sbjct: 245 EDINLRLEVEIDRVMARREGITERKQTVEVKGLISSAQWGCGFSTSSRQFFYINGRPCNL 304 Query: 262 KFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 + I Y + P+ +L +I VD+NV P K I + + + + Sbjct: 305 TKVARAINEVYKSF-NTNQLPLAILDFKIPTESVDINVSPDKRTIFVHSEDCLIDSLKVL 363 Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL-PKYATSLTNTQEKLFLQENRLSTND 380 + G SS ++M S + L L++ + L++ LST+ Sbjct: 364 MCS--QTTGSIPSSPHEEQMKGSITSAATLTSSLCELNEARLSSPSSQASLRQRSLSTSK 421 Query: 381 LLPSDDPTYSEDN 393 + T S Sbjct: 422 PSLNPAQTVSAIQ 434 Score = 133 bits (334), Expect = 9e-29, Method: Composition-based stats. Identities = 63/311 (20%), Positives = 127/311 (40%), Gaps = 29/311 (9%) Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 + P ++ + I++ + Q ++ + S+ ++I F K Sbjct: 613 STSCDPQRTSASSSSSPIVKPRVSQRLKPDKAYRDEIISTAPQGEVIMRFDLSRLRK--- 669 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES-----EATHYQLGIAC 410 ++A + + ++L L ++D++ EE+ ++ Sbjct: 670 -RFANAGNRQAGAQSKRVSQLVKQGDLEEAAGIKNKDSELAEETLSRVISKADFEKMEVK 728 Query: 411 AQIHQNYIISQTT------DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 Q ++ +II++ D L I+DQHA+ E+ FE ++ +TKI +Q L+ P + Sbjct: 729 GQFNKGFIIARLQSTDNGTDDLFIIDQHASDEKYNFETLQ---QTTKIKAQALIKPRALH 785 Query: 465 LLEGECALIMEHDEDLHRLGIKA-----ERFG-PNAIAIREIP----AILSKKNIPQLLR 514 L G+ + ME+ + L+ G + G I++ +P + K++ QLL Sbjct: 786 LTAGDEIVAMENIDILNANGFDVHVDESKPAGKGERISLLAMPVSKETVFDFKDLEQLLH 845 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 ++ + S + + A+ AC S+ G+ + +M++LLR M C Sbjct: 846 -LLSDDSRPSGQMVRCMKARAMFASRACRKSVMIGKTLTKGQMSQLLRNMGTIDQPWNCP 904 Query: 575 HGRPTFIKLKL 585 HGRPT L Sbjct: 905 HGRPTMRHLTK 915 >gi|238584720|ref|XP_002390649.1| hypothetical protein MPER_10039 [Moniliophthora perniciosa FA553] gi|215454304|gb|EEB91579.1| hypothetical protein MPER_10039 [Moniliophthora perniciosa FA553] Length = 481 Score = 207 bits (527), Expect = 4e-51, Method: Composition-based stats. Identities = 87/318 (27%), Positives = 137/318 (43%), Gaps = 23/318 (7%) Query: 39 SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEA 96 ++ + + GG QI D+G G+ ++P+ +R TSK+S D S + T+GFRGEA Sbjct: 1 ATSIRVTVKEGGLKLLQIQDHGCGIRKSDLPILAERFTTSKLSSFSDLSRLTTYGFRGEA 60 Query: 97 LPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISS--------VRPVAMNPGTIVEVRDLF 148 L SI V+HL+++++ + S K+ +P A N GT + + DLF Sbjct: 61 LASISHVAHLSVITKTRSETCAYKAQYSDGKLVPAQVGHTAEPKPCAGNDGTTIVIEDLF 120 Query: 149 FTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPER 208 F P RL+ L++ E + I DV+ + AI KVSF S ++ S N + Sbjct: 121 FNTPTRLSALRNTSEEYSRILDVMTKYAIHNSKVSFMCKKAGSGTPDLSTVS-NSQTSQA 179 Query: 209 ISQVIGEDFINNAVELNEKSNE-------ITLQGYTGIPTFNRGNANQFYVFINGRTV-- 259 I + G + S + T + + + Sbjct: 180 IRTLYGHAIEKELLHTTMSSPDDTKKDESWTAEVFFTNANYQAKKTVFLLFINRKYHWVT 239 Query: 260 ---QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRN 316 + I + Y +P G +P + L L IDPR VDVNVHP K + F N I Sbjct: 240 HHLESTRIKRALEAVYNGILPRGAFPFLYLSLNIDPRAVDVNVHPTKKEVHFLNEEHITE 299 Query: 317 FIIQSIQKAINKKGISTS 334 I +IQ+ + +K S + Sbjct: 300 QICDNIQEKLAEKSHSRA 317 >gi|313754335|pdb|3NCV|A Chain A, Ngol gi|313754336|pdb|3NCV|B Chain B, Ngol Length = 220 Score = 207 bits (527), Expect = 4e-51, Method: Composition-based stats. Identities = 78/189 (41%), Positives = 116/189 (61%), Gaps = 1/189 (0%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITSQTLLTPEIIDL 465 G A AQ+ YI++Q D L+++D HAA ER+ +EKM++ + SQ LL P Sbjct: 30 GFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQSQHLLIPVTFAA 89 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 ECA + +H E L G++ G N +A+R P +L K ++ L RD++ E+ + Sbjct: 90 SHEECAALADHAETLAGFGLELSDMGGNTLAVRAAPVMLGKSDVVSLARDVLGELAQVGS 149 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 + T+ ILATM+C+GSIR+GR++ EMN LLR+ME P S+QCNHGRPT++KL L Sbjct: 150 SQTIASHENRILATMSCHGSIRAGRRLTLPEMNALLRDMENTPRSNQCNHGRPTWVKLTL 209 Query: 586 SDIEKLFGR 594 +++ LF R Sbjct: 210 KELDTLFLR 218 >gi|308163232|gb|EFO65588.1| Mlh1-like protein [Giardia lamblia P15] Length = 786 Score = 207 bits (526), Expect = 5e-51, Method: Composition-based stats. Identities = 106/583 (18%), Positives = 208/583 (35%), Gaps = 85/583 (14%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L + + ++AAGE+I+RP KELIEN+ DA++ + I+ + D G Sbjct: 3 PIRILDSETVAKMAAGEVIQRPFNVAKELIENATDADAPTIRLFISSNCYDLLMVCDTGH 62 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ + + R TSKI+ D NI +FGFRGEAL SI +S + ++S+ T Sbjct: 63 GIERIDYSLLCHRFATSKIATFSDIYNIQSFGFRGEALSSISYISRMIIISKTRDQPTYL 122 Query: 120 QIAIS------------GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNL 167 + + + + + TIV V DLF+T P R N ++S + + Sbjct: 123 AVYMDGKLHFDPKILATEHTDFFINTLKSDSFTIVCVTDLFYTEPIRRNQIRSSKTSLD- 181 Query: 168 ITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERIS----------------- 210 + +++ ++ A P ++ S I + + + N + IS Sbjct: 182 MQELLISISAANPTREYSISFINNLQAIQREIQSWLNDTQHISGILSLISHTIEFGTATL 241 Query: 211 ---------------------QVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ 249 Q G + KS + ++ Sbjct: 242 HFSSTTTRYQRFLQVLTTLLNQTKGCGVEAPHIHSLVKSYPCNTCRELSFYFVEPIDHSR 301 Query: 250 FY-------VFINGRTVQDKFILSTIRTAYAETIP-LGRYPVVVLLLEIDPRQVDVNVHP 301 +FIN R VQ + + +++ + +L + +DP D NVHP Sbjct: 302 QDKRLINLLIFINSRRVQYPRLKNAVQSVVDIYLSAFSTIQAGILWIAVDPGGCDPNVHP 361 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL------ 355 +K + I +I + + + + + T+ L + + Sbjct: 362 SKERVLLLEEEAIYTAVIDMLTQHMKEHYVKTTEPLLSQPKLKLRPQLTHTDNSIHKGCH 421 Query: 356 --PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 +S T L+ Q + ST + + + +A+ Sbjct: 422 LTNALDSSFKGTSNPLYKQRHDPSTISIFRFEGVQRTPREREPPTIQASILCSPPPQFPH 481 Query: 414 HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALI 473 H N + + V ++ + ++ ++T I S ++ + + A Sbjct: 482 HGNSHDQEGEERQVDTNKESKE-----DQSADISDTTTIDSAAIVQQVQEI--QAQSAEP 534 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 + + + FG ++ R+ P +L+ N+ +L+ + Sbjct: 535 VNYMALFDK------EFGEHS---RKSPRVLASMNVQRLIDSL 568 >gi|326922189|ref|XP_003207334.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Meleagris gallopavo] Length = 811 Score = 207 bits (526), Expect = 5e-51, Method: Composition-based stats. Identities = 75/366 (20%), Positives = 135/366 (36%), Gaps = 48/366 (13%) Query: 34 SLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFG 91 SLDA+S+ ++ V+ GG Q+ DNG G+ E++ + +R TSK+ +D ++I T+G Sbjct: 130 SLDAKSTSIQVVVKEGGLKLIQVQDNGCGIRKEDLHIVCERFTTSKLQKFEDLASISTYG 189 Query: 92 FRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTI 151 FRGEAL SI V+H+T+ ++ + A Sbjct: 190 FRGEALASISHVAHVTVTTKTADAKCAYRYASYYPSNLCCGYAIH--------------- 234 Query: 152 PARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQ 211 +SF+ + + N + I Sbjct: 235 ---------------------------NSGISFSVKKQGDTVSDVRTLA-NATTVDNIRS 266 Query: 212 VIGEDFINNAVELNEKSNE--ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIR 269 + G +E+ + ++GY ++ +FIN R V+ + I Sbjct: 267 IFGNAVSRELIEVGCEDANLAFKMKGYITNANYSVKKCIFL-LFINHRLVESTALRKAIE 325 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 T YA +P +P + L LEI P+ VDVNVHP K + F + I + Q ++ + Sbjct: 326 TVYAAYLPKSTHPFLYLSLEIAPKNVDVNVHPTKHEVHFLHEDSILERVQQHVESKLLGS 385 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 S + + + +T+ T +K++ + + + D Sbjct: 386 NSSRMYFTQTLLPGAECSSSEVVKSATSSSTATKGTSDKVYAHQMVRTDSREQKLDAFLQ 445 Query: 390 SEDNDP 395 +N Sbjct: 446 PVNNPM 451 >gi|300813973|ref|ZP_07094267.1| MutL C-terminal dimerization domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511914|gb|EFK39120.1| MutL C-terminal dimerization domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 415 Score = 206 bits (525), Expect = 7e-51, Method: Composition-based stats. Identities = 98/416 (23%), Positives = 177/416 (42%), Gaps = 39/416 (9%) Query: 216 DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + N +E + S ++ Y R + N Y++INGR V ++ I I Y Sbjct: 1 EIATNLIENSFSSENYKIRAYFSNNKLFRSSRNHQYIYINGRYVTNREISREIEKVYKSL 60 Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI--------- 326 IPL R+PV +L ++I+ +DVN+HP K ++ N + + + +++ + Sbjct: 61 IPLNRFPVFILFIDINSSLIDVNIHPKKHEVKLSNENNLIAILCEMVEEVLYPNRSIREI 120 Query: 327 -----------NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENR 375 + ++ L ++ + S + + E Sbjct: 121 EDEPKVNLNVFDIFDDKSNDNLINFKEPAYEPSDNYIKEFDIDNQSFHENYQPFDVYEEN 180 Query: 376 LSTNDLLPSDDPTYSEDNDPVEESEATHYQLG---------------IACAQIHQNYIIS 420 N+ + + + + N+ S + + + +II Sbjct: 181 ADNNNDIDNIEENTKDFNNYNIPSLEQYQEDSFLNDKEVIDSNLINTRIVGILFDTFIIL 240 Query: 421 QTT--DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 + D + +VDQHAAHER+++EK ++ + ++ I SQ LL PEII+L E I ++ Sbjct: 241 ENKNKDLIYLVDQHAAHERVMYEKYKKQYLNSNINSQVLLKPEIIELNASEYMKIEKNFH 300 Query: 479 DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 LG + FG N+I +RE+P I +RDIID + D + D + + Sbjct: 301 LFKDLGFSIDSFGENSIILREVPMIFGFPTYVSFIRDIIDSLDDKIYSNYQADMWKVM-- 358 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 AC ++++G + ++E+ L+ + N C HGRPT I +K + I KLF R Sbjct: 359 KKACLKAVKAGDTLSNMEVKELINSLIHCENPYTCPHGRPTIIDIKKTTIAKLFLR 414 >gi|58736989|dbj|BAD89403.1| PMS1 nirs variant 6 [Homo sapiens] Length = 248 Score = 206 bits (525), Expect = 7e-51, Method: Composition-based stats. Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 14/247 (5%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 P + F K +++ Q E I +I + + + Sbjct: 182 LKPDLRIVFVHNKGEAVRLSRQLPMYLSKEDIQDIIYR--------MKHQFGNEIKECVH 233 Query: 238 GIPTFNR 244 G P F+ Sbjct: 234 GRPFFHH 240 >gi|291221411|ref|XP_002730726.1| PREDICTED: MutL protein homolog 1-like [Saccoglossus kowalevskii] Length = 1476 Score = 206 bits (525), Expect = 7e-51, Method: Composition-based stats. Identities = 79/352 (22%), Positives = 152/352 (43%), Gaps = 27/352 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ LS+++ +++ +G I + ++EL+ NS+DA ++ + + + DNG Sbjct: 10 TIQPLSDEVRSRLRSGIAITSLTQCVEELVLNSIDANATCIAVRVDIP-CYKVHVIDNGT 68 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTG 118 G+T E++ + QR+ TSK + D N+ +GFRGEAL SI V L ++S+ +N Sbjct: 69 GITVEQMKLIGQRYATSKCHNIQDLENLSYYGFRGEALASICDVTGVLEIVSKAKSSNCT 128 Query: 119 AQIAISGEKISSVRPVAMN---PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 K V GT + V D F+ +P R + S +E + + + Sbjct: 129 YCKLFKNGKPLEVFKAEKPRPSQGTTITVHDFFYNLPVRRKTM-SPVLEFERVRQCLEGI 187 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A+ P VS + + + ++ Q+ G E+ NE T+ G Sbjct: 188 ALMRPFVSLSLRNDYTGVKTLQTHKSDSIL-GTFGQLFGVGKARIMKEMQYSYNEFTIIG 246 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTI------------RTAYAETIPLGR--- 280 + G T N N ++++NGR + + + RT E R Sbjct: 247 HIG--TDGHTNKNIQFIYVNGRLLLKTKLHKVVNVLLSKSVIVKSRTGMCEIPSPSRGSD 304 Query: 281 -YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 +P+ VL ++ + D+ + P+K+ + F++ I + I + + ++ + Sbjct: 305 LHPMFVLNIQCPLSEYDICLEPSKTLVEFKDWDGILLCLENFILEFLKRENL 356 Score = 127 bits (320), Expect = 4e-27, Method: Composition-based stats. Identities = 56/303 (18%), Positives = 111/303 (36%), Gaps = 29/303 (9%) Query: 318 IIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLS 377 I + + K+ +S + + ++ + E + Sbjct: 1147 IGTIWDEHLVKQSEDVASKWRDDKTNKISESKDVAELFAEWENPMFAVPESCISDASNQP 1206 Query: 378 TNDLLPSDDPTYSEDN---DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAA 434 + ++ ++ + A + + + + LV++DQHAA Sbjct: 1207 VSRQSVRIRGAINQYKFTKAMLDNIKMCGQVDDKFIACLVKTTDKTDEPNLLVLIDQHAA 1266 Query: 435 HERLIFEKMRQDFN----------STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 HER+ E++ D S KI S ++ I L GE ++ ++ +LG Sbjct: 1267 HERVRLEQLTADVYDDSKDDEDPISRKIRSSRVIPAVTIILTPGEIRIMEAFKSNIEKLG 1326 Query: 485 IKAERFGPNAIAIREIPAILSKKNI---------------PQLLRDIIDEIIDSSTT-YT 528 + G + I I +PA L ++ + LL++ ID + +S Sbjct: 1327 VTFNITGSDIIEIHTLPACLMEREVNEVKRGRQPVALSIVETLLKEHIDLLQKTSGACAV 1386 Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 L + +L + AC+G+I+ G + E L+R + QC HGRP+ + + DI Sbjct: 1387 LPRTLTKVLNSQACHGAIKFGDALDHHECTSLIRSLSHCDLPFQCAHGRPSLMPIIDLDI 1446 Query: 589 EKL 591 + Sbjct: 1447 LRK 1449 >gi|58737039|dbj|BAD89428.1| postmeiotic segregation increased 2 nirs variant 4 [Homo sapiens] Length = 183 Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats. Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 3/162 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 75 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTR 134 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE 161 + KI P GT V V+ LF T+P R + Sbjct: 135 LMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRN 176 >gi|317139577|ref|XP_001817615.2| DNA mismatch repair protein [Aspergillus oryzae RIB40] Length = 898 Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats. Identities = 79/365 (21%), Positives = 140/365 (38%), Gaps = 37/365 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + I + +I P +KEL++N+LDA ++ + I+ Q+ DNG Sbjct: 1 MPITALPPTTVRAIGSTSVIADPCSVVKELLDNALDASATSIGIEISSNAVDVIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVS-HLTLMSRPPQN 115 G++S++ + +R TSKI +D + + GFRGEAL S VS +T+ +R Sbjct: 61 HGISSDDHALVCKRTFTSKIQTVEDLRTLGGKSLGFRGEALASAAEVSGGVTITTRVEAE 120 Query: 116 NTGAQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 G ++ S + + GT V + LF IP R KS I +I+ Sbjct: 121 MVGTSIKYGRNGELISSQRASHPVGTTVRITGLFKHIPVRRQSALKSAVKTLARIKKLIQ 180 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN---FPERISQVIGEDFINNAVELNEKSNE 230 A+A P + +K+ N+ G + ++ G D ++ V S Sbjct: 181 IYAMAQPSKRLSLKVLKAKNENNNWIYAPGRDAMITDAALKIAGTDVTSSCVLKKWPSEH 240 Query: 231 ITLQGY----------------TGIPTFNRGNANQFYVFINGRTV-QDKFILSTIRTAYA 273 G+ + + ++ I+GR + + I I Y Sbjct: 241 NVNSGHPQEEHTSEVGLLALLLDLDTDCTKLSNAGQFLAIDGRPISSSRGIGQDISKLYK 300 Query: 274 ETI----------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ 323 + P P + L ++ DVN+ PAK + F + + + + + Sbjct: 301 SYLRSALSRSESSPSITDPFLCLHIQCPQGSYDVNIEPAKDDVLFEDSQRLISLVEDLFR 360 Query: 324 KAINK 328 + Sbjct: 361 SMYGE 365 >gi|115401604|ref|XP_001216390.1| predicted protein [Aspergillus terreus NIH2624] gi|114190331|gb|EAU32031.1| predicted protein [Aspergillus terreus NIH2624] Length = 669 Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats. Identities = 82/340 (24%), Positives = 129/340 (37%), Gaps = 16/340 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + I + +I P +KEL++N+LDA ++ V I+ Q+ DNG Sbjct: 1 MPITALPQDTARAIGSTSVISDPCSVVKELLDNALDASATSVFIEISQNTVDVIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVS-HLTLMSRPPQN 115 G+ + + +R TSKI+ +D I + GFRGEAL S VS +T+ +R Sbjct: 61 CGIPPSDHALVCKRAHTSKIATVEDLKKIGGSSLGFRGEALASTAEVSGGVTVTTRVDTE 120 Query: 116 NTGAQIAI-SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETN-LITDVIR 173 + I + SV+ + GT V V DLF IP R +T + +I+ Sbjct: 121 PVASVIRYGRDGGVISVQRASHPVGTTVRVTDLFKHIPVRRQTTLKNTTKTLARVKRLIQ 180 Query: 174 RMAIAYPKVSFTFSTI---KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN- 229 A A P + + N M N + ++ G D + V + Sbjct: 181 EYAAAQPSKRLSLKVLKAKNENGNWMYAPKPNAGLLDAALKIAGTDVASTCVLKHWPIPE 240 Query: 230 -EITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIR--TAYAETIPLGRYPVV 284 G P + K S +R +A E+ P + Sbjct: 241 ATSDFTCVEGNPDCRMTALVLDPNAASRGIGKNIAKIYKSYVRSGSAARESTTTVTDPFL 300 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQK 324 L + + DVN+ PAK + F N I I + + Sbjct: 301 CLHVYCNEATYDVNIEPAKDDVLFENTPSILEAIEELCRD 340 >gi|226324943|ref|ZP_03800461.1| hypothetical protein COPCOM_02735 [Coprococcus comes ATCC 27758] gi|225206291|gb|EEG88645.1| hypothetical protein COPCOM_02735 [Coprococcus comes ATCC 27758] Length = 335 Score = 205 bits (522), Expect = 2e-50, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 130/320 (40%), Gaps = 3/320 (0%) Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIR-NFIIQSIQKAINKKGISTS 334 P L +I + Y + + + + ++ ++ G S Sbjct: 16 WSQSEMPSAELQTQISTEKTVSTGDEKLDYFMQKMRERVYASHLTEAKEEQEKNIGAKES 75 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 + + + N + S T+ E+ L DL + Sbjct: 76 KMAALDENPAVDIQNKGTENRAYSDKSKEKTERDPEKTESNLFLKDLKAKKVKQLDLFEE 135 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 + + EA Q+ + Y + Q D L I+DQHAAHER+++E+ + TS Sbjct: 136 QILKKEARQEY--RIIGQVFETYWLIQYRDSLYIIDQHAAHERVLYERTLAGMKKREYTS 193 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q L P I+ L E ++ + +G + E FG + A+R IP L +LL Sbjct: 194 QYLSPPIILSLSMQEIDVLETFKDRFTAIGFEIEPFGGDEYAVRAIPDNLFGIAKKELLL 253 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 +++D + D +T + I+ +A+M+C +++ K+ EM+ L+ E+ N C Sbjct: 254 EMLDSLSDGLSTSLEPELIDEKIASMSCKAAVKGNMKLSYAEMDELINELLSLDNPYHCP 313 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRPT I + ++EK F R Sbjct: 314 HGRPTIIAMTKRELEKKFKR 333 >gi|309354946|emb|CAP39693.2| CBR-PMS-2 protein [Caenorhabditis briggsae AF16] Length = 838 Score = 205 bits (522), Expect = 2e-50, Method: Composition-based stats. Identities = 86/407 (21%), Positives = 172/407 (42%), Gaps = 49/407 (12%) Query: 2 KIRKLSEKIINQIA-AG------EIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFF 54 KI K+S+ + ++ A +++ S A+++LI+NS+DA S+ ++ + G Sbjct: 5 KIEKISKDVAERLTTAQNLRKNLQVVVSLSSALRQLIDNSIDAGSTIIDIRVKNNGYDSI 64 Query: 55 QITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRP 112 ++ DNG G+ ++ + H TSK++ DF + T GFRGEAL ++ VS +++ +R Sbjct: 65 EVQDNGSGIETQNFDALCKPHSTSKLTQFSDFDKLVTLGFRGEALNALCTVSSVSIFTRA 124 Query: 113 PQNNTGAQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITD 170 + G + I I+ +P A GT + V +LF T+P R +S++ E + Sbjct: 125 ADSEIGTRLIYDHSGNITERQPAARELGTTIIVNNLFETLPVRRKELERSQKREFVKLLA 184 Query: 171 VIRRMAIAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINN-------- 220 ++ A+ P + + + + ++ + G I N Sbjct: 185 TVQSFALLCPHIKILCTNNIAGKKTNIICTPGGTSTIQDVVTNLFGMRRIGNSKNGSALV 244 Query: 221 -----------------AVELNEKSNEITLQGYTGIPTFNRGN--ANQFYVFINGRTVQD 261 +E + + ++G+ G +++ +V+IN R V+ Sbjct: 245 PILQDQPDGEIMAMHSLQMEETQFFDLFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEY 304 Query: 262 KFILSTIRTAY------AETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIR 315 + + + +YP++VL +++ P ++DVNV P K + + Sbjct: 305 MRVSLNVLEVCSVTNDVYKQFNKNQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLL 364 Query: 316 NFIIQSIQKAINKKGISTS---SVLSKKMISSFHQDNAPKTHLPKYA 359 I S+ K K S S S + + I + Q +A T + ++ Sbjct: 365 AVIRASMMKTYLKIVGSHSTIKSSVEDRRIMALAQQSAINTSVVYFS 411 Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats. Identities = 60/251 (23%), Positives = 103/251 (41%), Gaps = 8/251 (3%) Query: 336 VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 + + I+ +D + +T +K + + L + TYS+ P Sbjct: 583 DVYSRHINPEPEDPVENSDEKDALDEITTGFKKEETADAERQLSRSLTLVEKTYSDF--P 640 Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 + + Q + +II + L IVDQHA+ E+ FE+++ NS K+T Q Sbjct: 641 IFNFRKDDFTKMQIIGQFNHGFIICRLRGHLFIVDQHASDEKYNFERLQ---NSAKLTKQ 697 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE-RFGPNAIA--IREIPAILSKKNIPQL 512 L TP + + +I E+ G + R + + P +LS++ Sbjct: 698 PLFTPIALGFGSVQELIIRENLPIFQANGFDFDFREKDGCLKTFLTARPELLSQQLTNSD 757 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 L +I+ + + RI NI A+ AC S+ G+ + EM R++R + K Sbjct: 758 LEEILAVVSEYPNQMYRPVRIRNIFASKACRKSVMIGKPLNHREMTRIIRHLSKLDQPWN 817 Query: 573 CNHGRPTFIKL 583 C HGRPT L Sbjct: 818 CPHGRPTIRHL 828 >gi|299738271|ref|XP_001838229.2| DNA mismatch repair protein [Coprinopsis cinerea okayama7#130] gi|298403231|gb|EAU83597.2| DNA mismatch repair protein [Coprinopsis cinerea okayama7#130] Length = 918 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 84/431 (19%), Positives = 162/431 (37%), Gaps = 62/431 (14%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR + + +++I +G+++ A+KEL+ENS+DA ++ +E G + ++ DNG G Sbjct: 7 IRPIDQASVHRITSGQVVIDLQTAVKELVENSIDAGATNIEVRFKQYGLTSVEVIDNGSG 66 Query: 63 MTSEEIPM---AVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQ-N 115 + ++ +H TSK+ +D + + TFGFRGEAL S+ A+ + + + Sbjct: 67 IDEKDFDSIVHVALKHHTSKLEVYEDLNTVQTFGFRGEALSSLCALCESINVTTSTEDTA 126 Query: 116 NTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 G + + ++ + + VA GT V V LF +P R + + E + ++ Sbjct: 127 PKGTSLELDFSGQVKARQVVARKRGTTVTVSKLFTPLPVRRKEFERKAKREFDKALSLLY 186 Query: 174 RMA----IAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK 227 A A P V + + K + + ++ + G + N VEL+ Sbjct: 187 AYALGPCAASPGVRMSVTNHTEKGQKSVQLQTQGTPSLRASVTALWGPKAMENLVELDVS 246 Query: 228 S----------------------NEITLQGYTGIP--TFNRGNANQFYVFINGRTVQDKF 263 +I ++G T R N ++ + +INGR Sbjct: 247 FSIETEKSVLKRLKAFKQSASDSIDIHVKGLTSKFAVGCGRLNTDRQFFYINGRPCNLPK 306 Query: 264 ILSTIRTAYAETIPLGRYPVVVLLLEIDP-----------------RQVDVNVHPAKSYI 306 + Y + P +V I DVNV P K I Sbjct: 307 VQKAFNEVYRTF-NANQAPFLVADFIIPTGLLSSLVTPLPSNPSFADSCDVNVSPDKRTI 365 Query: 307 RFRNPTIIRNFIIQSIQKAINKKGI-----STSSVLSKKMISSFHQDNAPKTHLPKYATS 361 N + + ++++ + + L++ ++S H P ++ Sbjct: 366 LVHNEDSLITALKEALEDHFSSSRATFDLGQSQGRLTQTTLASSHTQTVAPRPTPAPSSP 425 Query: 362 LTNTQEKLFLQ 372 +T L + Sbjct: 426 CPSTVAALDVP 436 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 13/104 (12%) Query: 400 EATHYQLGIACAQIHQNYIISQ----------TTDGLVIVDQHAAHERLIFEKMRQDFNS 449 E + Q + +II Q D L IVDQHAA E+ FE ++ Sbjct: 776 EKGDFASMAVIGQFNLGFIIVQRKQPGSEDKPPMDDLFIVDQHAADEKYNFETLQLT--- 832 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPN 493 TKI +Q LL P ++L G+ L +E+ E L G + E N Sbjct: 833 TKIQAQKLLRPRPLELTAGDELLAIENLEVLRNNGFEVEMIEEN 876 >gi|260836417|ref|XP_002613202.1| hypothetical protein BRAFLDRAFT_210470 [Branchiostoma floridae] gi|229298587|gb|EEN69211.1| hypothetical protein BRAFLDRAFT_210470 [Branchiostoma floridae] Length = 362 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 77/364 (21%), Positives = 149/364 (40%), Gaps = 40/364 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + Q+ +G + + ++EL+ NSLDA ++ V I Q+ DNG G Sbjct: 2 IRTLDPSVRAQLRSGVSVPSVAQCVEELVLNSLDAAATCVAVRIDLENFW-IQVVDNGHG 60 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 + +++ + R+ TSK D ++ FG+RGEAL SI V + L + SR + + Sbjct: 61 IPKDQLSIVGDRYATSKCHTVTDLESLSFFGYRGEALASIAQVCAVLEIESRHKASTKVS 120 Query: 120 QIAISGEKISSVRPVAMN---PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K+ S+ + GT V V ++F +P R F+ S +E I + + +A Sbjct: 121 TKVFRHGKVVSIFESKAHRPTYGTTVTVHNVFHNLPVRQKFV-SVSLERERIRERVAAIA 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P VSFT ++ K + + G + E + + + + GY Sbjct: 180 LIHPSVSFTLR-NENVGGKYLQTHKTNSLVSCFGSLFGTKKSMSLREASHQHEQFKISGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR---------------- 280 N + +++IN R + + + +++ + R Sbjct: 239 ISRE--GHRNKDLQFLYINNRLILRTKVHKFLNLLMSKSTVINRRAGQWEPRTPTVRDNS 296 Query: 281 -------------YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 Y + VL + + D+++ PAK+ + F+ + + +QK + Sbjct: 297 ATDASSPGKQRDYYGMFVLNISCPLSEYDISLDPAKTLVEFKEWEALLTCVQDMVQKFLK 356 Query: 328 KKGI 331 K+ + Sbjct: 357 KENL 360 >gi|156083705|ref|XP_001609336.1| DNA mismatch repair protein [Babesia bovis T2Bo] gi|154796587|gb|EDO05768.1| DNA mismatch repair protein, putative [Babesia bovis] Length = 883 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 83/380 (21%), Positives = 156/380 (41%), Gaps = 9/380 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I LS + ++I ++EL+EN++DA ++ + + G + ++DN Sbjct: 1 MSIVGLSADRSASHRSLQVISEVKCVVRELVENAIDAGATDIVIKLVDQGLTSISVSDNA 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFS-NIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+ + +R TSKI +D ++ + GFRGEAL SI VS L + +R + Sbjct: 61 SGIEAFNFEQLAKRSSTSKIKQFEDIFTSLSSHGFRGEALNSIANVSTLEVETRVAKEEV 120 Query: 118 GAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLN-FLKSEQVETNLITDVIRRM 175 G + + + P+A GT+V LF P R N +K + + ++++ Sbjct: 121 GWYLKFDRDGSLIEKTPIAKKVGTVVTSSKLFEPYPVRRNLLIKGAKSQATGAVGIVQQY 180 Query: 176 AIAYPKVSFTFSTIKSNRYK----MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI 231 A+ YP++ F + + S ++ + T+ + E ++ G +FI N +++ + Sbjct: 181 ALIYPEIRFLLTNMSSTNHQISSLFSSTGTSKSIREVSGEIFGSNFIKNVLDIKLTRDTW 240 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 +++G P R N + +FIN R V L + VL + ID Sbjct: 241 SVEGIISTPQTGRQNNDIQILFINRRPVDGMKKLKRCIKDVHKQFSSKYNVAYVLNINID 300 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 + VDVN+ P K + I + + I + + S + + Sbjct: 301 SKHVDVNLAPDKRRLFLMQEDTITRQLKEGILELYMMRMAKDSITNDPLRMKQLQFSRSS 360 Query: 352 KTHLPKYATSLTNTQEKLFL 371 P +S T + + Sbjct: 361 TASSPDMQSSRTESTDSFVF 380 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 51/315 (16%), Positives = 103/315 (32%), Gaps = 38/315 (12%) Query: 301 PAKSYIRFR---NPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 P K + R+ + + + A + + S ++ ++S +L Sbjct: 557 PIKLDPHLSVVKQEVVARDSLTDAQEIASTQSNVDRPSPRTEDAVNSDTAQTNEVLNLKL 616 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 N ++ + S+ D + + + G A++ Y Sbjct: 617 QRVYDDNFRKSEVYRMFGSSSEPGFHPIDTETIDPKIFLRMQVCGQFNNGFIIAKLESKY 676 Query: 418 -IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 ++ + ++D HAA E+ FEK +S KI Q L+ +DL ++ + Sbjct: 677 SESNKVKYAVYLIDPHAADEKTKFEKY---NSSVKIQRQPLVCERKVDLSPFHQQVVQAN 733 Query: 477 DEDLHRLGI-------KAERFGPNA----IAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 + L+ G G I + P +L + + + ++ S + Sbjct: 734 LDLLYENGFAATVVRQVVNDEGGYNREPGIYLSSFPQVLGQILGEEDFVSFVHDLAQSGS 793 Query: 526 TY--------------------TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 + RI NILA AC +++ G + +M + + Sbjct: 794 SSQPDPTNTSASQVLWGANTILPRPKRIWNILANRACKDAVKLGDPLTMKQMIVIKDRLA 853 Query: 566 KNPNSSQCNHGRPTF 580 + C HGRPT Sbjct: 854 GLVHPWNCPHGRPTM 868 >gi|167527530|ref|XP_001748097.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773515|gb|EDQ87154.1| predicted protein [Monosiga brevicollis MX1] Length = 703 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 88/415 (21%), Positives = 159/415 (38%), Gaps = 33/415 (7%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R LS ++++ +++ S +KELIENS+DA ++ ++ +A G ++TDNG GM Sbjct: 26 RLLSAACQRRLSSEQVVPTASQVVKELIENSIDAGATNIDVRLANAGLDLIRVTDNGKGM 85 Query: 64 TSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGAQ 120 + ++ + + HCTSK++ D+ ++ T GFRGEAL SI + L + S N Q Sbjct: 86 SEADLAVIAEPHCTSKLASIDELQHLATLGFRGEALSSIRECAAELVITSAQHANTPARQ 145 Query: 121 --IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRM 175 + + GT + V LF +P R + + E L R Sbjct: 146 LTLRSKEPRPRPTLTANAGVGTSIVVTRLFHALPVRRQAHQAASARKQEMALAQHYCRAY 205 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 + +P + FS N ++ +F I G +++ L+ + + Sbjct: 206 GLIHPGLHLQFSATGRNAVTWRKRAA-KDFLGAIGATFGAVHVHSLHALSGNTPAGHFEA 264 Query: 236 YTGI-----PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 Y +R ++ +VF+N R V + L + + + R+ + L L + Sbjct: 265 YVPRREAPIEAISRSQGDRAFVFVNDRYVDGRPFLYALNKHWWKGSGRRRWAHLYLQLRV 324 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSI--QKAI-----------------NKKGI 331 +D+NV K + + A+ I Sbjct: 325 AAPTLDINVAVDKLQYFMEQQDELLQAFETACAAYYALPLGTTLQAGRLVSSQPAADCRI 384 Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDD 386 S + + S +D +P+ A +LT Q + T+ L P D Sbjct: 385 PDESAQANAHVHSESEDPSPEPSGTTSAETLTALPSASDEQPTTIPTSTLAPHGD 439 >gi|170111214|ref|XP_001886811.1| predicted protein [Laccaria bicolor S238N-H82] gi|164638169|gb|EDR02448.1| predicted protein [Laccaria bicolor S238N-H82] Length = 365 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 79/357 (22%), Positives = 145/357 (40%), Gaps = 33/357 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + I++I +G+++ A+KEL+ENS+DA ++ VE G ++ DNG Sbjct: 7 SIKAIDRTSIHRITSGQVVIDLQTAVKELVENSIDAGATSVEVRFKQYGLKSVEVIDNGS 66 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN-NT 117 G+ E+ +H TSK+ +D S + TFGFRGEAL S+ A+ LT+ + + Sbjct: 67 GIPEEDYDSVALKHHTSKLETFEDLSIVRTFGFRGEALSSLCALCEQLTVATATKETVPM 126 Query: 118 GAQIAI-SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRM 175 G + + S + S VA GT V + LF +P R ++ + E ++ Sbjct: 127 GVSLEMGSNGHVKSRSTVAKPKGTTVTINSLFSPLPVRRKEFERNSKREFGKALALLHAY 186 Query: 176 ----AIAYPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVE------ 223 A P V T S +K TNG + ++ + G ++N V+ Sbjct: 187 ALGPCSAGPGVRLTVSNQLDKGFKSVQIRTNGTPSTRASVTALWGPKALDNIVDLNLAFS 246 Query: 224 ------------LNEKSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIR 269 ++ + ++G G ++ ++++NGR + Sbjct: 247 VDREKHTLRGQSQATETVFVEVKGLLSKFAVGCGRPGTDRQFLYVNGRPCNLSKVQKAFN 306 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 Y + P ++ + D+N+ P K I N + + + S + Sbjct: 307 EVYRTF-NANQVPFILADFILPTESCDINLSPDKRTIFLHNEGNLISALKVSFGIVL 362 >gi|322787067|gb|EFZ13291.1| hypothetical protein SINV_14462 [Solenopsis invicta] Length = 757 Score = 204 bits (520), Expect = 3e-50, Method: Composition-based stats. Identities = 74/330 (22%), Positives = 147/330 (44%), Gaps = 36/330 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + + I +II +KEL+EN++DA++ +E + G+S ++ DNG Sbjct: 1 MPISALDVRTVKLITTTQIITSVYAVVKELVENAIDADADNIEINLIDNGRSLIEVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DD--------------------FSNIHTFGFRGEALP 98 G++ E+ P TSKI+ +D + TFGFRGEAL Sbjct: 61 CGISKEDTPYMGLPSYTSKITNFEDLDYCIVIATKSILTSLFLSFLDELQTFGFRGEALS 120 Query: 99 SIGAVSHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF 157 ++ AV+ + ++++ ++N A A++ I + + GT V+VR+LF +P R Sbjct: 121 ALCAVAEVIIITKTKEDNVAALYAMNHNGHIVNCETCHRSTGTTVQVRNLFKQVPVRRQI 180 Query: 158 LKSEQVETNLIT---DVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIG 214 + + + I +I+ I P + F + + + + N E ++ V+G Sbjct: 181 ITNTKKTNQTIKLLETLIQCFGICKPNIRIQFRVNNNVIFT---KPSLNNIREAVNHVLG 237 Query: 215 EDFINNAVELNEKSNEITLQGYTGI----PTFNRGNANQFYVFINGRTVQDKFILSTIRT 270 ++N + K+ E+TLQ + + + ++F+N R ++ K + + + Sbjct: 238 RKIMSNMEWVESKNAELTLQLMLPSKKVQNLSDIFHPDLHFIFVNNRPIKHKDLEKIVNS 297 Query: 271 ---AYAETIPLGRYPVVVLLLEIDPRQVDV 297 + E + V ++ + + P +D Sbjct: 298 LILEHFEQESYRKKTVFLVYITLRPMDIDN 327 >gi|71746104|ref|XP_827624.1| mismatch repair protein PMS1 [Trypanosoma brucei TREU927] gi|13027781|gb|AAK08649.1| putative mismatch repair protein PMS1 [Trypanosoma brucei] gi|70831789|gb|EAN77294.1| mismatch repair protein PMS1, putative [Trypanosoma brucei] Length = 788 Score = 204 bits (520), Expect = 3e-50, Method: Composition-based stats. Identities = 96/509 (18%), Positives = 176/509 (34%), Gaps = 33/509 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L E +++AG++I S +KEL+ENSLDA + V + G + D+G G Sbjct: 2 ITLLDEGSSRKLSAGQVITNLSSVVKELVENSLDAGARTVAIRVEDSGAGNITVEDDGSG 61 Query: 63 MT-----------SEE--IPMAVQRHCT------SKISDDFSNIHTFGFRGEALPSIGAV 103 M E+ +P+ R T S +S T GFRGEAL S+ + Sbjct: 62 MDLSYLLDSEGRLKEDASLPLLASRATTKRRGGDSGLSS--QAAQTLGFRGEALHSLAHL 119 Query: 104 SHLTLMSRPPQN-NTGAQIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPAR-LNFL 158 S L++ + T IA + V + GT V V LF +P R +F+ Sbjct: 120 SELSICTMSESTRPTALLIAYDSNSRRTTVKVTSERRDVGTTVVVSKLFAALPVRHKDFV 179 Query: 159 KSEQVETNLITDVIRRMAIAYPKVSFTFSTI---KSNRYKMNFQSTNGNFPERISQVIGE 215 + + + T ++++ A+++P V + S + + G+ +++ G Sbjct: 180 RGRKKQLLAATLLMKQYALSHPHVRLLMTHRAGPDSAPVTLVSLTGTGDPQRALAEAYGG 239 Query: 216 DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 I N + + T+ GY R +++ ++GR V + + AYAE+ Sbjct: 240 RVIANMERVEWELTFGTITGYVSKGNAGRLSSDMQVFALDGRLVDLPMMAKAVNDAYAES 299 Query: 276 IP---LGRYPVVVLLLEIDPR-QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 +P +P L + DVN+ P K + + + + Sbjct: 300 LPNAAQRTFPAFFLHVSSGESLPYDVNLVPDKRKVLISDEERHAGEVRTCGLRTFQASTD 359 Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + + + T L+ T F+ + R ++ D+ ++ Sbjct: 360 GIDLPVRNEGGWRHVPERRNTQETMPTQTPLSATSIAQFIYQRRETSQGDNLIDNAAVAQ 419 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 V S+ I +T ++ A + E + K Sbjct: 420 VQPSVCLSQLLSGSSPIGRTSSPDATASPTSTTNRAPSERSAGSVESVLEYPLTFEPTQK 479 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDL 480 E + E +L Sbjct: 480 RQRLESSAEEGNTGDTDGSSWGEEDPREL 508 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 84/183 (45%), Gaps = 4/183 (2%) Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 ++ + Q + +I++ D + ++DQHAA E+ +E + + + Q L +P + Sbjct: 595 FKNMVVHGQFNHGFIVTSLDDNIFVIDQHAADEKGNYEHLMSHYVARP---QPLFSPVPV 651 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGP-NAIAIREIPAILSKKNIPQLLRDIIDEIID 522 + L ++H E+L + G +R N + + +P I + PQ + ++I +++ Sbjct: 652 SMEPQAVDLAVDHAEELRQHGFIVQRSDDTNKLLVLSVPVIPYEVVDPQNVVELIRQLVH 711 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 +T + + +AT AC SI G + +M ++ M + C HGRPT Sbjct: 712 YNTISKPMRCVWHSMATKACRSSIMVGTMLSEKKMRSVVDRMGELEQPWNCPHGRPTVRH 771 Query: 583 LKL 585 + Sbjct: 772 VSK 774 >gi|292627044|ref|XP_696739.3| PREDICTED: DNA mismatch repair protein Mlh3 [Danio rerio] Length = 1164 Score = 204 bits (520), Expect = 3e-50, Method: Composition-based stats. Identities = 92/418 (22%), Positives = 176/418 (42%), Gaps = 34/418 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L + Q+ +G I ++ELI NS+DA ++ V I Q+ DNG G Sbjct: 2 IKSLPINVQAQLRSGVAIFSLQQCVEELILNSIDAGATCVAVKIDIEACKL-QVIDNGSG 60 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGA 119 M E++ R+ TSK S +D N+H +GFRGEA+ SI +++ + + SR Q+ Sbjct: 61 MCLEDMEKVGLRYNTSKCSSLEDLDNLHFYGFRGEAISSIVSLAEMVEISSRTKQSVKTY 120 Query: 120 QIAISGE---KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 + + ++ + V + GT V V +LF +P R + +ET I + ++ Sbjct: 121 VKSFNETNALEVFEAQTVRPSAGTTVSVYNLFHNMPVRRKRMDPV-LETERIRQRVEAIS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P VSFT S + T+ + + Q+ G + E+N + + + G+ Sbjct: 180 LMHPSVSFTVKKENSAHMMVQLSKTSSTYYRFV-QIHGLNRAQKLGEVNYEHEQFQITGH 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR---------------- 280 G N + ++F+N R + I T+ R Sbjct: 239 IGRE--GHYNNSLQFLFVNERLLLKTRIHKTLNCLLKRVSGAARQNNSPTSYPVTSSPKQ 296 Query: 281 ------YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 + + V+ ++ + D+ + PAKS I F++ + I + ++ + K+ + + Sbjct: 297 KGGYDLHGIYVINIKCHYSEYDICLEPAKSLIEFKDWDNVLICIEEGVKAFLTKENLVSE 356 Query: 335 -SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + +S + NA + K ++ TN + +++N S D+ E Sbjct: 357 LNTISNDGLPCSPVRNAESSEKQKRSSEETNEACETMIEKNDSSVVDVADGVQMLEQE 414 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 109/293 (37%), Gaps = 23/293 (7%) Query: 319 IQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 ++A N S + +S+ + + ++ T + ++ Sbjct: 840 KPRAERAFNSGTDSREDAQAPDSLSTLFSEWHNPVFIRPPEVAVDVTSGQAEGLAVKIHN 899 Query: 379 NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 + + + I A + + + + LV+VDQHAAHER+ Sbjct: 900 ILFPYRFTKNMIHTMRVINQVDKKFLACLINTAGQNTSESSTDEGNLLVLVDQHAAHERV 959 Query: 439 IFEKMRQDFNS--------TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 E + D ++ S + P I++ E E L+ L L + RF Sbjct: 960 RLEGLIADSYEDDPDTPGKKRLCSSRVTPPLEINVTEEELRLLRSCQGFLRGLALDV-RF 1018 Query: 491 GPN---AIAIREIPAILSKKNIPQL--------LRDIIDEIIDSSTTY-TLQDRIENILA 538 + ++ + +PA +K +L LR+ I+ + + L + N+LA Sbjct: 1019 PKSESLSVFLESLPACFIEKESTELRRGRRSDYLREHIELLRSTGRVRGILPLTVHNVLA 1078 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 + AC+G+I+ + E L+ + QC HGRP+ + L +D+ L Sbjct: 1079 SQACHGAIKFNDVLNKEECCSLVSSLSSCRLPFQCAHGRPSIVPL--ADLHHL 1129 >gi|237839411|ref|XP_002369003.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49] gi|211966667|gb|EEB01863.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49] Length = 1687 Score = 204 bits (520), Expect = 3e-50, Method: Composition-based stats. Identities = 76/353 (21%), Positives = 141/353 (39%), Gaps = 31/353 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++ +S + + + +++ KEL+EN++DA ++ VE GG + ++ DNG Sbjct: 213 RLHAMSSLVAEAVCSQQVVLGLKSICKELVENAIDAGATTVEVRFVDGGMASVEVRDNGS 272 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++ PM +RH TSKI+ D + + T GFRGEAL S+ A+S + +++R Sbjct: 273 GIAPQDFPMLGRRHATSKINKFTDLYSALDTMGFRGEALASLCALSDVEILTRTASEPFA 332 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIP-ARLNFLKSEQVETNLITDVIRRMA 176 ++ KI P A GT V V +LF ++P R + Q +++ A Sbjct: 333 TRLRFDHHGKIIHQEPAAREVGTSVTVSNLFASLPLRRRALRQQRQKHLQESLAFLQKFA 392 Query: 177 IAYPK------VSFT---------------FSTIKSNRYKMNFQSTNGNFPERISQVIGE 215 + + FT S+ +N + T + V GE Sbjct: 393 LLHADDCRILVTDFTPANSSRSAEASSGSQRRNGGSSVTLLNTRGTATRLLDAAVTVYGE 452 Query: 216 DFINNA----VELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKF-ILSTIRT 270 + + E E +++ P + F+N R V+ + I Sbjct: 453 RQMQQCTQVSLAGAEPGREWSVEALLSRPPLGVRTSALQLFFVNKRVVEFPPLLQKLINK 512 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ 323 Y E +P+V+ + P ++VN+ K + I ++ + Sbjct: 513 KYREVCSRHCFPIVIAFATVAPHLLEVNLRKDKQEVLLAVEKEITEALLVGGR 565 Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%) Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ ILA+ AC +I G + +M +L+ + C HGRPT L Sbjct: 1393 CRPKKVWEILASRACRSAIMIGDSLTVNQMQTVLKNLATLHLPFNCPHGRPTVRHL 1448 >gi|254580625|ref|XP_002496298.1| ZYRO0C15180p [Zygosaccharomyces rouxii] gi|238939189|emb|CAR27365.1| ZYRO0C15180p [Zygosaccharomyces rouxii] Length = 913 Score = 204 bits (520), Expect = 3e-50, Method: Composition-based stats. Identities = 95/427 (22%), Positives = 175/427 (40%), Gaps = 38/427 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI + I++I +G+++ + A+KELI+NS+DA + +E V+ G + +D+G Sbjct: 3 KINAIGGYDIHRITSGQVVIDLTTALKELIDNSIDANAHHIEVVLKNYGIESIECSDDGD 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E +H TSKIS D + + T GFRGEAL S+ AV+ + + + Sbjct: 63 GIEKENHEFLALKHHTSKISTFQDMAAVSTLGFRGEALASLCAVAKVVVTTTTRPPRADK 122 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAIA 178 K+ + + N GT +++ +LF +P R K+ + + +++ ++ Sbjct: 123 LEYSYDGKLINKSTTSRNRGTTIQLSELFNNLPVRKKEFSKNCKKQFAKCLTMLQSYSVI 182 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGED----------------FINN 220 + F+ + SN K ST N +RI + G F Sbjct: 183 QDDIKFSVWHVTSNGRKTLALSTTRNQGISKRILSIFGSSSIRGLSEVDLTLDLNPFKGQ 242 Query: 221 AVELNEK-------SNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKFILSTIRTA 271 + + +I +QG +F ++ V+IN R V I+ Sbjct: 243 MLRKYAEDPDFESLDYQIRVQGLISRNSFGCGRTAKDRQLVYINRRPVDYPVIIQCCNEV 302 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKA------ 325 Y + +YP L E+ P+ +D+NV P K + N + + + +++ K Sbjct: 303 YKSFNNV-QYPAFFLNFELSPQLIDINVTPDKRTVLLHNEKYVIDVLRETLTKYFDDQDL 361 Query: 326 -INKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 + K S V++ K ++ ++ + A L KL +E + N L P Sbjct: 362 LLPKASFSQPEVINPKKRTAEQTEDDEGQREEEVAEELPERASKLARREPLKAFNGLSPE 421 Query: 385 DDPTYSE 391 + S Sbjct: 422 GSTSISP 428 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 76/192 (39%), Gaps = 14/192 (7%) Query: 403 HYQLGIACAQIHQNYIISQT----TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 + Q + +II L IVDQHA+ E+ FE +++ SQ L+ Sbjct: 710 DFDHMQIVGQFNLGFIICTRRIGSNYDLFIVDQHASDEKFNFENLQKTTI---FKSQKLI 766 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKNIPQLLR 514 P +DL + +M++ + G K + + + +P + Sbjct: 767 APLDVDLSAIDELAVMDNLKVFENNGFKLCIQDDEIEGTKVQLTSLPVSKNTIFGIDDFY 826 Query: 515 DIIDEIIDS---STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 +++ + ++ + +I ++LA AC SI G+ + M +++R + Sbjct: 827 ELVHLLKENQGINRDSIKCSKIRSMLAMRACRSSIMIGKPLTQKTMCKVVRHLSGLDKPW 886 Query: 572 QCNHGRPTFIKL 583 C HGRPT L Sbjct: 887 NCPHGRPTMRHL 898 >gi|296088648|emb|CBI37639.3| unnamed protein product [Vitis vinifera] Length = 1230 Score = 204 bits (518), Expect = 5e-50, Method: Composition-based stats. Identities = 81/350 (23%), Positives = 158/350 (45%), Gaps = 11/350 (3%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M+ I+ L E + + + +G I+ + ++ELI NSLDA +++V ++ G + ++ D+ Sbjct: 1 MRSIKPLPEAVHSSVRSGIILFDLTRVVEELIYNSLDAGATKVSVSVSVGTC-YIKVVDD 59 Query: 60 GFGMTSEEIPMAVQRHCTSKISDDFS---NIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+T + + + +R+ TSK+ +FGFRGEAL SI VS L ++++ Sbjct: 60 GTGVTRDGLVLLGERYATSKLHHLTEMDAATGSFGFRGEALGSISDVSLLEIVTKTQGRP 119 Query: 117 TGAQIAISGEKISS--VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNL-ITDVIR 173 G + + G K + + GT V VRDLF+ P R +L+S + + + Sbjct: 120 NGYRKVMKGCKCLYLGIDDDRQDVGTTVVVRDLFYNQPVRRKYLQSSPKKVLHSVKKCVF 179 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 R+A+ + VSF I+S+ ++ ++ + + +G + ++ ELN + L Sbjct: 180 RIALVHSNVSFKVVDIESDD-ELLCTKSSSSPLSLLISGLGIEDSSSLHELNITDGILKL 238 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 GY P YV I ++ + + YP +L L Sbjct: 239 SGYVSGPCNTFSIKAFQYVCI--HVYSFDPWKASSGSQDKKRSRCQGYPTYILNLRCPQS 296 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS 343 D+ P+++ + F++ I F+ +++ + ++ S + S Sbjct: 297 HYDLTFEPSRTAVEFKDWVPILAFLEKAVTRFWSEHIAHGESSVHANKTS 346 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 17/191 (8%) Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI-IDLLEG 468 Q+ + +I L I+DQHAA ER+ E++RQ S ++ + T L E + L E Sbjct: 994 LQQVDKKFIPVVADGTLAIIDQHAADERIRLEELRQKVLSGEVKTITYLDAEQELVLPEI 1053 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNA----------------IAIREIPAILSKKNIPQL 512 L+ + E + G N+ I + +P IL Sbjct: 1054 GYQLLHTYAEQIQNWGWICNIHAQNSRSFTKNLDLLHKKPTVITLLAVPCILGVNLSDVD 1113 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 L + + ++ D+ + T+ + +L AC G+I G + E + ++ E+++ Q Sbjct: 1114 LLEFLQQLADTDGSSTMPPSVLRVLNLKACRGAIMFGDALLPSECSLIVEELKRTSLCFQ 1173 Query: 573 CNHGRPTFIKL 583 C HGRPT + L Sbjct: 1174 CAHGRPTTVPL 1184 >gi|296448867|ref|ZP_06890698.1| MutL dimerization protein [Methylosinus trichosporium OB3b] gi|296253626|gb|EFH00822.1| MutL dimerization protein [Methylosinus trichosporium OB3b] Length = 238 Score = 203 bits (517), Expect = 6e-50, Method: Composition-based stats. Identities = 87/188 (46%), Positives = 128/188 (68%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 G A AQIH+ YI++QT DGLVIVDQHAAHERL++E+++ + + + Q LL P +++L Sbjct: 50 GAARAQIHETYIVAQTRDGLVIVDQHAAHERLVYERLKAERAAQGVARQLLLVPRVVELD 109 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 ++ +L LG+ E FGP A+ RE+PA L + +L+ D+ D I ++ Sbjct: 110 GARLDALLASLSELAELGLVLEPFGPGAVLAREVPAALGDAEVERLIEDVADLICEAGDA 169 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 L R++ +LA AC+ S+R+GR++ + EMN LLREME+ P + QCNHGRPT+++LKL+ Sbjct: 170 RGLTQRLDAVLARAACHHSVRAGRRLGAQEMNALLREMERTPGAGQCNHGRPTYVELKLA 229 Query: 587 DIEKLFGR 594 DIEKLFGR Sbjct: 230 DIEKLFGR 237 >gi|238496769|ref|XP_002379620.1| DNA mismatch repair protein pms1, putative [Aspergillus flavus NRRL3357] gi|220694500|gb|EED50844.1| DNA mismatch repair protein pms1, putative [Aspergillus flavus NRRL3357] Length = 324 Score = 203 bits (517), Expect = 6e-50, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 7/220 (3%) Query: 11 INQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 ++QI +G++I KEL+ENSLDA ++ +E G ++ DNG G++ E Sbjct: 74 VHQIQSGQVIVDLCSVAKELVENSLDAGATSIEVRFKNNGLDLIEVQDNGSGISPENYEN 133 Query: 71 AVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NTGAQIAISGE- 126 +H TSK+S +D S + TFGFRGEAL S+ A+S +++ ++ Sbjct: 134 VALKHYTSKLSSYEDLSRLQTFGFRGEALSSLCALSEFHVVTAQANQAPKANRLDFEHSG 193 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIAYPKVSFT 185 K+ + VA GT V V LF +P R K+ + E + +++ A V F Sbjct: 194 KLKKTQIVAGQKGTTVSVEGLFKRLPVRRRELEKNIKREYGKVLNLLHAYACVSKGVRFN 253 Query: 186 FSTIKSNRYKMNFQSTNGNF--PERISQVIGEDFINNAVE 223 + + STNGN E I+ V G + + Sbjct: 254 VKNTVAKTRNVVVFSTNGNQTTKENIANVYGAKTLLALIP 293 >gi|213019776|ref|ZP_03335579.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212994606|gb|EEB55251.1| DNA mismatch repair protein MutL [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 418 Score = 203 bits (517), Expect = 6e-50, Method: Composition-based stats. Identities = 125/412 (30%), Positives = 213/412 (51%), Gaps = 28/412 (6%) Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI 231 + +A+ + FT ++ K Q++ N I ++F +N++E+ E+ I Sbjct: 1 MNNLAMINYSIGFTLTSGNKKLLKYVKQTSLFNRLCEIE----KEFQSNSLEVKEEEEGI 56 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 L+G+ P NRGN+ Q Y F+NGR ++D ++ IR AY + IP RYP VL LE+ Sbjct: 57 KLKGHICKPNVNRGNSTQIYTFVNGRPMKDNLLVGAIRYAYHDFIPNNRYPFAVLHLEVP 116 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI-----SSFH 346 QVDVNVHP KS +RF+N +I + + I K ++ + + + +++I S Sbjct: 117 YDQVDVNVHPNKSEVRFQNKRLIYEIVRRGIIKTLSTRFAAGDQGIEEELIFNDSKSQEQ 176 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQ------ENRLSTNDLLPSDDPTYSEDNDPVEESE 400 D+ K ++ + E ++ E R S + + + +E + Sbjct: 177 IDSQEKKDQKEFYEKRPSLLENRLMKEFNAPDERRQSLPETFKYGESPPQKGTMVLERKQ 236 Query: 401 AT---HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + LG A Q++ YII++ L+IVDQHAAHERLI+E + T I Q Sbjct: 237 IDLIADHPLGYARCQVYNTYIIAEAKGKLIIVDQHAAHERLIYECL------TSIKRQKF 290 Query: 458 LTPEIIDL-LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 L PE +++ + ++ + + L +G E + + ++EIPAIL +I ++L DI Sbjct: 291 LLPETVEIKNQAGMEMVGMYKDRLFEMGFGIEIESEDKVRVKEIPAILGTIDIKEMLVDI 350 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 +D++ + T ++D++ I AT+AC+G+ GRKM+ EMN +LR++EK P Sbjct: 351 VDKLTEMEDTLPIEDKVNKISATIACHGA---GRKMKLEEMNEILRQIEKTP 399 >gi|238499713|ref|XP_002381091.1| DNA mismatch repair protein Mlh1, putative [Aspergillus flavus NRRL3357] gi|220692844|gb|EED49190.1| DNA mismatch repair protein Mlh1, putative [Aspergillus flavus NRRL3357] Length = 548 Score = 203 bits (516), Expect = 7e-50, Method: Composition-based stats. Identities = 62/176 (35%), Positives = 98/176 (55%), Gaps = 10/176 (5%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DD 83 A+KELIEN++DA S+ +E ++ GG QITDNG G+ +++P+ +R TSK+ +D Sbjct: 3 ALKELIENAVDAGSTSLEILVKDGGLKLLQITDNGHGIDRDDLPILCERFTTSKLKQFED 62 Query: 84 FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRP--------VA 135 S+I T+GFRGEAL SI ++HLT+ ++ ++ + S K+ + +P A Sbjct: 63 LSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAWRAHYSNGKLVAPKPGQPAAPKATA 122 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKS 191 GT + V DLF+ +P R +S E I DV+ R A+ V+F+ Sbjct: 123 GRGGTQITVEDLFYNVPTRRRAFRSASEEYAKILDVVGRYAVHCSGVAFSCRKHGD 178 >gi|296532255|ref|ZP_06894999.1| DNA mismatch repair protein MutL [Roseomonas cervicalis ATCC 49957] gi|296267425|gb|EFH13306.1| DNA mismatch repair protein MutL [Roseomonas cervicalis ATCC 49957] Length = 215 Score = 203 bits (516), Expect = 7e-50, Method: Composition-based stats. Identities = 75/189 (39%), Positives = 124/189 (65%), Gaps = 1/189 (0%) Query: 407 GIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 G AQ+ + YI+++ DG LV+VDQHAAHERL E+++ ++ +Q LL P +++L Sbjct: 26 GRPVAQLLETYILAEAPDGALVLVDQHAAHERLTHEQLKAQLLDGEVRAQPLLIPAVVEL 85 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 + A ++E L RLG++ E FG + +R +PA+L + LLRD+ E+ + Sbjct: 86 PPADAARLLEAAPTLARLGLEIEDFGAATLLVRSLPALLGNPDPAPLLRDLCAELAEWEE 145 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 + L+ R++ +A +AC+GSIR+GR++ EM+ LLR+ME P +S C+HGRPT++++ Sbjct: 146 STALERRLDAAIARLACHGSIRAGRRLNPAEMSALLRQMEATPRASTCSHGRPTWLRMGK 205 Query: 586 SDIEKLFGR 594 +++EKLFGR Sbjct: 206 AELEKLFGR 214 >gi|322815592|gb|EFZ24225.1| mismatch repair protein PMS1, putative [Trypanosoma cruzi] Length = 774 Score = 203 bits (516), Expect = 7e-50, Method: Composition-based stats. Identities = 82/399 (20%), Positives = 154/399 (38%), Gaps = 32/399 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L +++AG++I S +KEL+ENSLDA + V I G + D+G G Sbjct: 2 IRRLDAASARKLSAGQVITDLSSVLKELVENSLDAGAHTVTVRIENYGLDKIVVNDDGSG 61 Query: 63 MT-----------SEE--IPMAVQRHCTSK--ISDDFSNIH----TFGFRGEALPSIGAV 103 + E+ +P+ R T+K + + +++ + GFRGEAL + + Sbjct: 62 LALGDLLTCEGTVREDASLPLLACR-ATTKNLLEEADASVAQFRDSLGFRGEALHCLANL 120 Query: 104 SHLTLMSRPPQNNTGAQIAISGEKISSVRPV----AMNPGTIVEVRDLFFTIPAR-LNFL 158 S +++ + ++ K +PGT + V LF +P R F Sbjct: 121 SEVSIQTMSAESQPATLCITYDVKTHRTSVSVTQERRHPGTTIVVEGLFRALPVRHREFN 180 Query: 159 KSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY---KMNFQSTNGNFPERISQVIGE 215 K+ + + T ++++ A+++P V + S + + + + +++ G Sbjct: 181 KNRKKQLLAATLLMKQYALSHPHVRLLMTHCLSPQSAPATLVSLTGTNDIHRALAEAYGG 240 Query: 216 DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 ++ + + + T+ G+ T R +A+ + ++GR V I + AYAE Sbjct: 241 RYLAEMNRVEWEFSFGTITGFVSKVTSGRLSADMQVLALDGRLVDLPIISKAVTDAYAEC 300 Query: 276 IP---LGRYPVVVLLLEIDPR-QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 P YPV L L DVN+ P K + F + + Sbjct: 301 QPNAAQRAYPVFFLHLSCGNHVPYDVNLEPNKRKVLFTEESKYAEEVHSRALMEFQASTD 360 Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLF 370 + + D L T ++ T F Sbjct: 361 GIDVDRHIHIERTRRADWKATQDLKLTRTPVSATSFTQF 399 Score = 139 bits (351), Expect = 1e-30, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 83/196 (42%), Gaps = 4/196 (2%) Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 T +N + + ++ I Q + +I++ D + ++DQHAA E+ +E + + Sbjct: 565 TEQTENQLATYLDKSSFKEMIIHGQFNHGFILASLGDDMFVIDQHAADEKFNYECLLSQY 624 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER-FGPNAIAIREIPAILSK 506 ++ Q LL + + + L + H E+L + G ER N + + +P + + Sbjct: 625 SARP---QPLLAAVSVSMDPHDVDLAVLHSEELRQHGFIVERGEDANKLLVYSVPVLQYE 681 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 P + +++ +I + + +AT AC SI G + M ++ + + Sbjct: 682 AVGPHDIVELVQQIALYGNITKPLRSLWHSMATKACRSSIMIGTALSEKTMRSVVSRLGE 741 Query: 567 NPNSSQCNHGRPTFIK 582 C HGRPT Sbjct: 742 LEQPWNCPHGRPTLRH 757 >gi|225561837|gb|EEH10117.1| DNA binding protein [Ajellomyces capsulatus G186AR] Length = 764 Score = 203 bits (516), Expect = 8e-50, Method: Composition-based stats. Identities = 80/349 (22%), Positives = 148/349 (42%), Gaps = 16/349 (4%) Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ + +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ + Sbjct: 33 IQCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAWR 92 Query: 121 IAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 S K+ +P A GT + V DLF+ +P R +S E I DV+ Sbjct: 93 AHYSDGKLVPAKPGQTAEPKPTAGRGGTQITVEDLFYNVPTRRRAFRSSSEEYAKILDVV 152 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE-- 230 R A+ V+F+ + ++ + + +RI Q+ G + ++ + Sbjct: 153 GRYAVHCSGVAFSCKKHGDSGVSISTSTNSTTV-DRIRQIHGSAVASELIDFSVDDPRLG 211 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 G+ ++ +FIN R+V+ + I AY+ +P G +P L LEI Sbjct: 212 FRASGWASNANYH-AKRTTILLFINHRSVESSAVRRAIEQAYSNFLPKGGHPFAYLDLEI 270 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 +P++VDVNVHP K + F N I I +IQ+ + +S + + + + Sbjct: 271 EPQRVDVNVHPTKREVNFLNEDEIIGSICTTIQQKLATVD--SSRTFMVQTLLPVGRTQS 328 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEES 399 + L + + L D + + + + Sbjct: 329 ASVNSNAEPPFDDRQPTPRTLSGTKRPYENNLVRTDASMRKITSMLPPA 377 >gi|261331832|emb|CBH14826.1| mismatch repair protein PMS1, putative [Trypanosoma brucei gambiense DAL972] Length = 788 Score = 203 bits (516), Expect = 8e-50, Method: Composition-based stats. Identities = 96/509 (18%), Positives = 177/509 (34%), Gaps = 33/509 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L E +++AG++I S +KEL+ENSLDA + V + G + D+G G Sbjct: 2 ITLLDEGSSRKLSAGQVITNLSSVVKELVENSLDAGARTVAIRVEDSGAGNITVEDDGSG 61 Query: 63 MT-----------SEE--IPMAVQRHCT------SKISDDFSNIHTFGFRGEALPSIGAV 103 M E+ +P+ R T S +S T GFRGEAL S+ + Sbjct: 62 MDLSYLLDSEGRLKEDASLPLLASRATTKRRGGDSGLSS--QAAQTLGFRGEALHSLAHL 119 Query: 104 SHLTLMSRPPQN-NTGAQIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPAR-LNFL 158 S L++ + T IA + V + GT V V LF +P R +F+ Sbjct: 120 SELSICTMSESTRPTALLIAYDSNSRRTTVKVTSERRDVGTTVVVSKLFAALPVRHKDFV 179 Query: 159 KSEQVETNLITDVIRRMAIAYPKVSFTFSTI---KSNRYKMNFQSTNGNFPERISQVIGE 215 + + + T ++++ A+++P V + S + + G+ +++ G Sbjct: 180 RGRKKQLLAATLLMKQYALSHPHVRLLMTHRAGPDSAPVTLVSLTGTGDPQRALAEAYGG 239 Query: 216 DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 I N + + T+ GY R +++ ++GR V + + AYAE+ Sbjct: 240 RVIANMERVEWELTFGTITGYVSKGNAGRLSSDMQVFALDGRLVDLPMMAKAVNDAYAES 299 Query: 276 IP---LGRYPVVVLLLEIDPR-QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 +P +P L + DVN+ P K + + + + Sbjct: 300 LPNAAQRTFPAFFLHVSSGESLPYDVNLVPDKRKVLISDEERHAGEVRTWGLRTFQASTD 359 Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + + + T L+ T F+ + R ++ D+ ++ Sbjct: 360 GIDLPVRNEGGWRHVPERRNTQETMPTQTPLSATSIAQFIYQRRETSQGDNLIDNAAVAQ 419 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 V S+ I +T ++ A + E + K Sbjct: 420 VQPSVCLSQLLSGSSPIGRTSSPDATASPTSTANRAPSERSAGSVESVLEYPLTFEPTQK 479 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDL 480 E + + E +L Sbjct: 480 RQRLESSAEEGNTGDTDDSSWGEEDPREL 508 Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 84/183 (45%), Gaps = 4/183 (2%) Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 ++ + Q + +I++ D + ++DQHAA E+ +E + + + Q L +P + Sbjct: 595 FKNMVVHGQFNHGFIVTSLDDNIFVIDQHAADEKGNYEHLMSHYVARP---QPLFSPVPV 651 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGP-NAIAIREIPAILSKKNIPQLLRDIIDEIID 522 + L ++H E+L + G +R N + + +P I + PQ + ++I +++ Sbjct: 652 SMEPQAVDLAVDHAEELRQHGFIVQRSDDTNKLLVLSVPVIPYEVVDPQNVVELIRQLVH 711 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 +T + + +AT AC SI G + +M ++ M + C HGRPT Sbjct: 712 YNTISKPMRCVWHSMATKACRSSIMVGTMLSEKKMRSVVDRMGELEQPWNCPHGRPTVRH 771 Query: 583 LKL 585 + Sbjct: 772 VSK 774 >gi|242820199|ref|XP_002487466.1| DNA mismatch repair protein, putative [Talaromyces stipitatus ATCC 10500] gi|218713931|gb|EED13355.1| DNA mismatch repair protein, putative [Talaromyces stipitatus ATCC 10500] Length = 870 Score = 202 bits (515), Expect = 1e-49, Method: Composition-based stats. Identities = 88/447 (19%), Positives = 156/447 (34%), Gaps = 28/447 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L I + ++ P +KELI+N LDA ++ + I+ Q+ DNG Sbjct: 1 MPIAALPPSTAQAIGSTSVLPNPCAVVKELIDNGLDAGATSISVEISPNSVDIIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIG-AVSHLTLMSRPPQN 115 G+ SE+ +R TSKI DD NI + GFRG AL S V LT+ +R + Sbjct: 61 HGVASEDFENLCKRAYTSKIRTLDDLRNIGGQSLGFRGFALASATDMVDSLTVTTRTKND 120 Query: 116 NTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLN-FLKSEQVETNLITDVIR 173 + + + ++ S + GT V + IP R +KS + I +++ Sbjct: 121 VVASVLEYDAQGRLVSTEKASHTVGTSVCLNGFLKKIPVRRQAAVKSASKTISKIKKLLQ 180 Query: 174 RMAIAYPKVSFTFSTIKSNRYK---MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE 230 A+A + + + K S+ + + +V+G + N Sbjct: 181 AYAMARLGIRLSLKVLNGRNEKDNWTYAPSSTASIVDASRKVVGVETAGQCESKAWPENV 240 Query: 231 ITLQGYT--------GIPTFNRGNANQFYVFINGRT-VQDKFILSTIRTAYAETI----- 276 F++ N + Y+ ++GR D+ I Y + Sbjct: 241 EDSIPSVNLLAYLPKADSDFSKVNNSSQYISVDGRPLSSDRGTAKEIIELYKSYVRSAAK 300 Query: 277 PLGRY----PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 G P + L + P D NV PAK + F + + + + + Sbjct: 301 ATGNSTLGDPFLSLHISCPPGAYDANVEPAKDDVLFAEREELFQTVEDMFKATYGEPQTA 360 Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 S + + + + K + T Q +E+R + + + Sbjct: 361 ADSTKKQPSSVNGFSVLLRQPAIQKPVSPPTTNQLPTLTRESRNVEDLAATLAAHSTDDS 420 Query: 393 NDPVEESEATHYQLGIACAQIHQNYII 419 E+ E GI I + + Sbjct: 421 LSEAEQPEVASKDNGINPWSIAKTHFF 447 >gi|241767667|ref|ZP_04765304.1| MutL dimerisation [Acidovorax delafieldii 2AN] gi|241361392|gb|EER57894.1| MutL dimerisation [Acidovorax delafieldii 2AN] Length = 204 Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats. Identities = 75/199 (37%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-KITSQ 455 + ++ LG A AQ+H YI+++ GLV+VD HAAHER+++E+++ ++ +I SQ Sbjct: 4 QAPREANWPLGRALAQLHGVYILAENAQGLVLVDMHAAHERIVYERLKAQVDAGARIASQ 63 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P E A E L LG++ F P +A+R +P L++ + +L R Sbjct: 64 PLLIPATFAATPEEVATAEASTEVLDLLGMEVVPFSPKTLAVRAVPTTLAQGDPVELARS 123 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 ++ E+ T +Q IL TMAC+G++R+ RK+ EMN LLR+ME S QCNH Sbjct: 124 VLAELAAHDATTVVQRARNEILGTMACHGAVRANRKLTPDEMNALLRQMETTDRSDQCNH 183 Query: 576 GRPTFIKLKLSDIEKLFGR 594 GRPT+ +L + D++ LF R Sbjct: 184 GRPTWRQLSMRDLDALFLR 202 >gi|282889890|ref|ZP_06298428.1| hypothetical protein pah_c005o024 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500213|gb|EFB42494.1| hypothetical protein pah_c005o024 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 133 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 53/119 (44%), Positives = 80/119 (67%), Gaps = 2/119 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KIR L E IN+IAAGE+IE P+ +KE++EN++DA S+ + I GG+ +I+DNG Sbjct: 4 KIRILDEHTINKIAAGEVIENPASVVKEIVENAIDAGSTEICVEIQEGGRQLIRISDNGC 63 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GMT ++ ++++RH TSK+ +D + T GFRGEA+PSI A+S L++ P +G Sbjct: 64 GMTQDDALLSLERHATSKLREVEDMEALATMGFRGEAIPSIAAISKFMLLTCPATPESG 122 >gi|58736987|dbj|BAD89402.1| PMS1 nirs variant 5 [Homo sapiens] Length = 196 Score = 202 bits (513), Expect = 2e-49, Method: Composition-based stats. Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 6/195 (3%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181 Query: 178 AYPKVSFTFSTIKSN 192 P + F KS Sbjct: 182 LKPDLRIVFVHNKSF 196 >gi|307208956|gb|EFN86167.1| PMS1 protein-like protein 1 [Harpegnathos saltator] Length = 239 Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 115/239 (48%), Gaps = 9/239 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L+ K + I ++I A+KELIEN+LDA + +E + G S ++ DNG Sbjct: 1 MPILALNVKTVKLITTTQVITSVYSAVKELIENALDANADNIEINLIDNGTSLIEVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ ++ TSKIS +D ++TFGFRGEAL ++ AV+ +T++++ ++ G Sbjct: 61 CGISKDDALFMGLSSYTSKISNFEDLDVLYTFGFRGEALNALCAVAEVTIITKTMEDIAG 120 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLIT---DVIRR 174 + + +I P + GT V+ ++LF +P R + + + I +I+ Sbjct: 121 TSYTMDHDGQIIKYEPCHRSTGTTVQAKNLFKQLPVRRQMIINTRRANQNIKLLETLIQS 180 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 +I P + F + + + + N E V+G +N + K+ + + Sbjct: 181 FSICKPNIRIQFRIDNNVIF---AKPSLNNIKEAACHVLGRKITSNMEWIEPKNIGVCI 236 >gi|212538865|ref|XP_002149588.1| DNA mismatch repair protein, putative [Penicillium marneffei ATCC 18224] gi|210069330|gb|EEA23421.1| DNA mismatch repair protein, putative [Penicillium marneffei ATCC 18224] Length = 874 Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats. Identities = 83/432 (19%), Positives = 158/432 (36%), Gaps = 30/432 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L I + I+ P +KELI+N LDA ++ + I+ Q+ DNG Sbjct: 1 MPIAALPPSTAQAIGSPSILPDPCAVVKELIDNGLDAGATSISVEISPNTLDIIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVSH-LTLMSRPPQN 115 G+ E+ +R TSKI DD N+ + GFRG AL S +++ L + +R + Sbjct: 61 HGIAPEDFENLCKRAYTSKIQTLDDLRNVGGQSLGFRGVALASAADMANTLIVTTRTKND 120 Query: 116 NTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIR 173 + + E ++ S + GT V + IP R +KS + I ++ Sbjct: 121 IVASVLKYDAEGRLVSTEKASHTVGTSVCLTGFLKKIPVRRQTAVKSASKTISKIKRLLH 180 Query: 174 RMAIAYPKVSFT----FSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE--- 226 A+A P + S + + S+ + + +V+G + V Sbjct: 181 AYAMARPGTRLSLKVLNSKNGKDNWTY-APSSTASIVDASLKVVGVETTGQCVCRTWPKN 239 Query: 227 -KSNEITLQGYTGIP----TFNRGNANQFYVFINGRT-VQDKFILSTIRTAYAETIPLG- 279 + + + ++ +P F + + Y+ ++GR D+ I Y I Sbjct: 240 VEESNMPVKLLAYLPKADADFPKVGNSNQYISVDGRPLSSDRGTAKEIVNLYRSYIRSAA 299 Query: 280 --------RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 P + L + P DVNV PAK + F + + + + + Sbjct: 300 KANGTLTVNDPFLNLHISCPPGAYDVNVEPAKDDVLFAEREELIQTVEELFKATYGELQK 359 Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 + + + + + + + + Q +R + + S Sbjct: 360 DSENTEKQSTSVNGFSVLLRQPAVQEPVSPPATNQFPRIASMSRTTKDLTRAPQKDLQSV 419 Query: 392 DNDPVEESEATH 403 ++D +SE+ Sbjct: 420 EDDDPSQSESHE 431 >gi|307170888|gb|EFN62999.1| 60S ribosomal protein L5 [Camponotus floridanus] Length = 948 Score = 201 bits (511), Expect = 3e-49, Method: Composition-based stats. Identities = 78/414 (18%), Positives = 154/414 (37%), Gaps = 33/414 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + I +II +KEL+EN+LDA++ +E + G S ++ DNG Sbjct: 1 MPISALDVRTAKLITTTQIITSVYAVVKELMENALDADADNIEINLIDNGTSLIEVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ ++ TSKIS +D + TFGFRGEAL ++ AV+ + ++++ ++ G Sbjct: 61 HGISKADVLYVGLPSYTSKISSFEDLDTLQTFGFRGEALNALCAVAEVIIITKTEEDVVG 120 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRR 174 ++ +I + GT V+ ++LF +P R + + L+ ++ Sbjct: 121 TSYIMNHIGQIVKHESCHRSTGTTVQAKNLFKQMPVRRQIMTDTRRANQVIKLLETLLHC 180 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 I V F + + + + N E ++ +G ++N + K + LQ Sbjct: 181 FGICKSNVRIQFRVNNNLVFT---KPSLNNIKEAVNHTLGRKIMSNMEWIESKDTDFVLQ 237 Query: 235 GYTGIPTFNR----GNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL---- 286 + + Y+F+N R ++ K + + + Y + + Sbjct: 238 LMLPSKKIQDLSEVSHPDLHYIFVNNRPIKHKSLEKSKVFDTVDKYMKKYYGLKSVEIVE 297 Query: 287 -----LLEIDPRQVDVNVHP---------AKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 + I +N K +I+ I++ N S Sbjct: 298 QNVSNDISICYEDYILNSSKDIIDTERPMCKKRKIDAQEKVIQKHIVKEKPVHNNGYETS 357 Query: 333 TSSVLSKKMISSFH--QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 + +I +D P + S +N N++ + L Sbjct: 358 LHKQQNIDLIQDQQHYKDALAHIQAPNLSDSDSNDIFPAVTSSNKMEECETLSQ 411 >gi|58736995|dbj|BAD89406.1| PMS1 nirs variant 9 [Homo sapiens] Length = 195 Score = 201 bits (511), Expect = 3e-49, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 6/193 (3%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAI 177 + I S +P + GT V LF +P R F K + E I D++ I Sbjct: 122 VLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGI 181 Query: 178 AYPKVSFTFSTIK 190 P + F K Sbjct: 182 LKPDLRIVFVHNK 194 >gi|326485120|gb|EGE09130.1| hypothetical protein TEQG_08828 [Trichophyton equinum CBS 127.97] Length = 1039 Score = 201 bits (511), Expect = 3e-49, Method: Composition-based stats. Identities = 94/427 (22%), Positives = 159/427 (37%), Gaps = 48/427 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I +KEL+ENSLDA ++ + G Sbjct: 3 TIKPIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSIGI----GTIRLI------- 51 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 +H TSK+S D +++ TFGFRGEAL S+ AVS+LT+++ Q A Sbjct: 52 -------NYIALKHYTSKLSTFADLTSLQTFGFRGEALSSLCAVSNLTVVTAEAQQAPRA 104 Query: 120 Q--IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 K+ S + VA GT V + +LF +P R K+ + E + ++ A Sbjct: 105 SKLDFEFSGKLKSTQIVAGQKGTTVSIENLFKPLPVRRRELEKNVKREYGKVIALLHAYA 164 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVE----------- 223 V F + +T N E IS V G + + Sbjct: 165 CISTGVRFNVKNQMPKGKSVVVFTTKSNPTTRENISNVYGAKTLLALMPLDLDLEYEPST 224 Query: 224 -----LNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 N+ SN+I + G+ P F R ++ F+N R I Y Sbjct: 225 AAKRFSNQASNKIFVHGHISKPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYKSF- 283 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 L + P + E+D DVNV P K I + + + + ++ + + Sbjct: 284 NLSQSPFIFANFEMDTSAYDVNVSPDKRTILLHDAGALIESL----KASLTELFENEDQT 339 Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 + ++ Q S+ Q+K + L DD D +P Sbjct: 340 VPVSQLTFSKQSQLTPKRGQTPPASVDAAQDKPEKPPGNADYSQELGHDDTVERNDREPT 399 Query: 397 EESEATH 403 + ++ Sbjct: 400 QTPQSPM 406 Score = 123 bits (308), Expect = 9e-26, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 78/206 (37%), Gaps = 45/206 (21%) Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 Q D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I+++ Sbjct: 796 AEQEQDELFIIDQHASDEKYNFERLQ---AETTVQNQRLVKPKTLDLTAVEEEVIIDNLA 852 Query: 479 DLHRLGIKAE-------RFGPNAIAIREIP----AILSKKNIPQLL-------------- 513 L + G E G I +P + +++ +L+ Sbjct: 853 ALEKNGFIVEIDTSGDEPIGRRCKLI-SLPLSKEVVFDTRDLEELIVLLSEAPQQSQNNL 911 Query: 514 ----RDIIDEIIDSSTTY------------TLQDRIENILATMACYGSIRSGRKMQSIEM 557 R+ ++ + ++ + A AC SI G+ + +M Sbjct: 912 GKRAREELESDAEYIEPSGVASTPFSDYLVPRPSKVRKMFAMRACRSSIMIGKNLTHRQM 971 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKL 583 +++ M C HGRPT L Sbjct: 972 ETVVKHMGTIDKPWNCPHGRPTMRHL 997 >gi|8928225|sp|P96082|MUTL_THEAQ RecName: Full=DNA mismatch repair protein mutL gi|1777768|gb|AAB40601.1| Hexb/MutL homolog [Thermus aquaticus] Length = 533 Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats. Identities = 90/309 (29%), Positives = 139/309 (44%), Gaps = 14/309 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L ++ +A GE++ A++EL+EN+LDA + RV + GGG + D+G G Sbjct: 2 IRPLPPELRGLLARGEVLLSVKDAVRELLENALDAGARRVRVELWGGGLERIVVEDDGEG 61 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + EE+P+AV+ TSK+ D I T GFRG+AL ++ + L + SRP G + Sbjct: 62 IPLEELPLAVEPFATSKLQ-DLERIATLGFRGQALYALRQAATLKIRSRPRGQVGGGLLL 120 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 GE++ +RP PGT VEV LF + + E + D+++R + +P + Sbjct: 121 ARGERV-ELRPAPAPPGTRVEVLGLFA------GEGRDPKAEARGVLDLLKRYLLHHPHL 173 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 S R E Q G L K L+G P Sbjct: 174 SLVLFLEGEARLLFP----GAGLKEAARQAFGGLLAERLFPLE-KGGAFALEGLLTGPQV 228 Query: 243 NRGNANQFYVFINGRTVQDKF-ILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 +R + ++ +NGR V +L +R AY E +P G YPV VL L + P + + Sbjct: 229 SRTRPDLLFLAVNGRPVALPEGVLRAVRRAYRELLPEGHYPVGVLNLSLPPGAYRLRLDA 288 Query: 302 AKSYIRFRN 310 K + Sbjct: 289 RKEEVALSK 297 Score = 133 bits (334), Expect = 9e-29, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 21/187 (11%) Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGE 469 A ++Y++++ D + IVDQHAAHER++FE++ + +D E Sbjct: 343 WATFRESYLLAEAEDAVYIVDQHAAHERILFEELLARLREEGLKPLPYPVLVELDEEPPE 402 Query: 470 CALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI--PQLLRDIIDEIIDSSTTY 527 + + E FGP + + P L + P++ R+ + + Sbjct: 403 ASPL-----------FGIEGFGPGRVRLLSAPPFLHPYPLLPPEIFRE---SLKGEGRS- 447 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 R+ +LA +AC ++++G + E LL + C HGRP + LK D Sbjct: 448 ----RLRGLLARLACLPALKAGHPLARAEGQALLDALLACETPWVCPHGRPVLLHLKEED 503 Query: 588 IEKLFGR 594 + + FGR Sbjct: 504 LIRRFGR 510 >gi|325119066|emb|CBZ54618.1| hypothetical protein NCLIV_050460 [Neospora caninum Liverpool] Length = 1620 Score = 201 bits (510), Expect = 4e-49, Method: Composition-based stats. Identities = 87/438 (19%), Positives = 157/438 (35%), Gaps = 35/438 (7%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++ +S + + + + +++ KELIEN++DA ++ VE GG ++ DNG Sbjct: 159 RLHAMSASVADGVCSQQVVLGLKSICKELIENAIDAGATTVEVRFVDGGMESIEVRDNGS 218 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++ PM +RH TSKI +D + + T GFRGEAL S+ A+S + +++R Sbjct: 219 GIGPQDFPMLGRRHATSKIDKFEDLYSALDTMGFRGEALASLCALSDVVILTRTASEPFA 278 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS-------------EQVE 164 +++ I P A GT V V +LF ++P R L+ ++ Sbjct: 279 SRLVFDHHGNIVHQEPAAREVGTSVTVSNLFASLPLRRRALRQQRQKHLQDALAFLQKFA 338 Query: 165 TNLITDVIRRMAIAYP--------KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGED 216 D + P S +N + T + V G Sbjct: 339 LLHAADCRVLVTDFIPGDANRTGEGSGSQRRKGGSTVTLLNTRGTAARLIDAAVSVYGAR 398 Query: 217 FINNA----VELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKF-ILSTIRTA 271 + ++ E E +L+ P ++ F+N R V + I Sbjct: 399 QMQQCSQVSLKGTEPGREWSLEVLLSRPPLGVRTSSLQLFFVNNRVVDFPPLLQKLINKK 458 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 Y E +P+V+ + + P ++VN+ K + I ++ + Sbjct: 459 YREVCSRQCFPIVIAFVAVAPHLLEVNLRKDKQEVLLAVEKEITEALLTPSPSLPESTRL 518 Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 TS + S ++ + E +E R T D+ Sbjct: 519 LTS---CRSPGSLGRKETWKQEDDGALRRGEDRKAEP--EKEGRGETAAGRHRDERDQKA 573 Query: 392 DNDPVEESEATHYQLGIA 409 VE+ A G Sbjct: 574 HEALVEDRRAPRLDAGFP 591 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 25/57 (43%) Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ ILA+ AC +I G + +M ++L + C HGRPT L Sbjct: 1342 QCRPKKVWEILASRACRSAIMVGDTLSVSQMQKVLSNLSTLHLPFNCPHGRPTVRHL 1398 >gi|266618993|ref|ZP_06111928.1| DNA mismatch repair protein MutL [Clostridium botulinum Bf] gi|263529157|gb|EEZ28463.1| DNA mismatch repair protein MutL [Clostridium botulinum Bf] Length = 574 Score = 201 bits (510), Expect = 4e-49, Method: Composition-based stats. Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 1/224 (0%) Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVD 430 LQ++ + ++L ++ T S + E Y Q + YI+ + L I+D Sbjct: 350 LQKDNKNLDNLYLNEHNTNSSSINIKENKPNNFYVDMKIIGQFNNTYILIEKDKELYIID 409 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHAAHE+++FEK + + + SQ LL+P +I+L E E + E+ + G E F Sbjct: 410 QHAAHEKVLFEKFKSEIEKGYVVSQILLSPVVIELSEDEFNIYEENKDIFKNSGFSVEAF 469 Query: 491 GPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 G I I+E+P IL K N+ L DI+ + + + T + I AT+AC ++++ Sbjct: 470 GECTINIKEVPLILGKPNVENLFMDILYNLKNMKSKETSTIKYNAI-ATLACKSAVKAND 528 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ E+ +L+ +M N C HGRPT IK L D+EK F R Sbjct: 529 NLKEEEIKKLIEDMLILNNPYTCPHGRPTMIKFTLKDLEKKFKR 572 Score = 179 bits (454), Expect = 1e-42, Method: Composition-based stats. Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 3/251 (1%) Query: 90 FGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFF 149 GFRGEAL SI +VS L SR N G +I I G KI ++ N GT +EV DLF+ Sbjct: 1 MGFRGEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLKDTGCNVGTTIEVSDLFY 60 Query: 150 TIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERI 209 +PARL FLKS + +++ I+D++ R +A+P +SF K GN + I Sbjct: 61 NVPARLKFLKSARSDSSAISDIVNRFILAHPDISFNLINKGKQSIK---SYGTGNLKDSI 117 Query: 210 SQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIR 269 V + N + + I++ G+ G P +R + +F+N R V+ KFI + + Sbjct: 118 RCVYNKTISENLINFENHKDIISVYGFIGKPEISRKSRTNQSIFVNKRYVKSKFITAAVE 177 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 A+ + + YP V+ ++I P +DVNVHP KS ++F++ + I ++ +AI + Sbjct: 178 NAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHEAIKGE 237 Query: 330 GISTSSVLSKK 340 + + K Sbjct: 238 LKESFTNFFNK 248 >gi|218296479|ref|ZP_03497207.1| DNA mismatch repair protein MutL [Thermus aquaticus Y51MC23] gi|218243021|gb|EED09553.1| DNA mismatch repair protein MutL [Thermus aquaticus Y51MC23] Length = 655 Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats. Identities = 90/309 (29%), Positives = 138/309 (44%), Gaps = 14/309 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L ++ +A GE++ A++EL+EN+LDA + RV + GGG + D+G G Sbjct: 2 IRPLPPELRGLLARGEVLLSVKDAVRELLENALDAGARRVRVELWGGGLERIVVEDDGEG 61 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + EE+P+AV+ TSK+ D I T GFRG+AL ++ + L + SRP G + Sbjct: 62 IPLEELPLAVEPFATSKLQ-DLERIATLGFRGQALYALRQAATLKIRSRPRGQVGGGLLL 120 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 GE++ +RP PGT VEV LF + + E + D+++R + P + Sbjct: 121 ARGERV-ELRPAPAPPGTRVEVLGLFA------GEGRDPRAEARGVLDLLKRYLLHRPHL 173 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 S R E Q G L K L+G P Sbjct: 174 SLALFLEGEARLLFP----GAGLKEAARQAFGGLLAERLFPLE-KGGAFALEGLLSGPQV 228 Query: 243 NRGNANQFYVFINGRTVQDKF-ILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 +R + ++ +NGR V +L +R AY E +P G YPV VL L + P + + Sbjct: 229 SRTRPDLLFLAVNGRPVALPEGVLRAVRRAYRELLPEGHYPVGVLNLSLPPGAYRLRLDA 288 Query: 302 AKSYIRFRN 310 K + Sbjct: 289 RKEEVALSK 297 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 20/145 (13%) Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 Q ++Y++++ D L IVDQHAAHER++FE++ + +D Sbjct: 338 PPLRYLGQFRESYLLAEAEDALYIVDQHAAHERILFEELLARLREEGLKPLPYPVLVELD 397 Query: 465 LLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE-IIDS 523 E + + E FGP + + P L + LL +I E + Sbjct: 398 GEPPEASPL-----------FAFEPFGPGRVRLLSAPPFLHPYPL--LLPEIFRESLKGE 444 Query: 524 STTYTLQDRIENILATMACYGSIRS 548 + + +LA +AC +I++ Sbjct: 445 GRS------LRGLLARLACLPAIKA 463 >gi|71649195|ref|XP_813339.1| mismatch repair protein PMS1 [Trypanosoma cruzi strain CL Brener] gi|70878213|gb|EAN91488.1| mismatch repair protein PMS1, putative [Trypanosoma cruzi] Length = 774 Score = 200 bits (509), Expect = 5e-49, Method: Composition-based stats. Identities = 80/398 (20%), Positives = 151/398 (37%), Gaps = 30/398 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L +++AG++I S +KEL+ENSLDA + V I G + D+G G Sbjct: 2 IKRLDAASARKLSAGQVITDLSSVLKELVENSLDAGAHTVTVRIENYGLDKIVVNDDGSG 61 Query: 63 MT-----------SEE--IPMAVQRHCTSKISDDFSNI-----HTFGFRGEALPSIGAVS 104 + E+ +P+ R T + ++ + GFRGEAL + +S Sbjct: 62 LALGDLLTSEGTVREDASLPLLACRATTKNLMEEADASVAQFRDSLGFRGEALHCLANLS 121 Query: 105 HLTLMSRPPQNNTGAQIAISGEKISSVRPVAM----NPGTIVEVRDLFFTIPAR-LNFLK 159 +++ + ++ K +PGT + V LF +P R F K Sbjct: 122 EVSIQTMSAESQPATLCITYDVKTHRTSVNVTQERKHPGTTIVVEGLFRALPVRHREFNK 181 Query: 160 SEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY---KMNFQSTNGNFPERISQVIGED 216 + + + T ++++ A+++P V + S + + + + +++ G Sbjct: 182 NRKKQLLAATLLMKQYALSHPHVRLLMTHCLSPQSAPATLVSLTGTNDIHRALAEAYGGR 241 Query: 217 FINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 ++ + + + + T+ G+ T R +A+ + ++GR V I + AYAE Sbjct: 242 YLADMNRVEWEFSFGTITGFVSKVTSGRLSADMQVLALDGRLVDLPIISKAVSDAYAECQ 301 Query: 277 P---LGRYPVVVLLLEIDPR-QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 P YPV L L DVN+ P K + F + + Sbjct: 302 PNAAQRAYPVFFLHLSCGNHVPYDVNLAPNKRKVLFTEESKYAEEVHSRALMEFQASTDG 361 Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLF 370 + + D L T ++ T F Sbjct: 362 IDVDRHIHIERTRRTDWKATQDLKLTRTPVSATSFTQF 399 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 82/196 (41%), Gaps = 4/196 (2%) Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 T +N + + ++ I Q + +I++ D + ++DQHAA E+ +E + + Sbjct: 565 TEQTENQIATYLDKSSFKEMIIHGQFNHGFILASLGDDMFVIDQHAADEKFNYECLLSQY 624 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER-FGPNAIAIREIPAILSK 506 + Q LL + + + L + H E+L + G +R N + + +P + + Sbjct: 625 KARP---QPLLAAVSVSMDPHDVDLAVLHSEELRQHGFTVKRGEDANKLLVYSVPVLQYE 681 Query: 507 KNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEK 566 P + +++ +I + + +AT AC SI G + M ++ + + Sbjct: 682 AVGPHDIVELVQQIALYGNITKPLRSLWHSMATKACRSSIMIGTALSEKTMRSVVSRLGE 741 Query: 567 NPNSSQCNHGRPTFIK 582 C HGRPT Sbjct: 742 LEQPWNCPHGRPTLRH 757 >gi|84998604|ref|XP_954023.1| DNA mismatch repair (MLH1 ) [Theileria annulata] gi|65305021|emb|CAI73346.1| DNA mismatch repair (MLH1 homologue), putative [Theileria annulata] Length = 904 Score = 199 bits (507), Expect = 9e-49, Method: Composition-based stats. Identities = 64/198 (32%), Positives = 108/198 (54%), Gaps = 3/198 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L +++ +IAAGEII RPS AIKELIENS+DA ++ + ++ F +I DNG G Sbjct: 24 IRPLPAEVVKKIAAGEIIARPSSAIKELIENSVDAGATEIRVNLSSNPLDFCEIIDNGSG 83 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 ++ +++ + QR+ TSK +D + + GFRGEAL S+ SH+T+ SR N + Sbjct: 84 VSEKDLMIICQRYTTSKTTDSIEGVRSLGFRGEALSSLSQNSHVTISSRTENENMRTVMT 143 Query: 123 ISGEK--ISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAY 179 S + + +R G ++ +LF+ R + L + E ++++ +I + Sbjct: 144 YSECEPVLDEIRYEEGPRGFHLKYENLFYNYEIRSKSLLSNINSEFISCLHLVQKYSIHF 203 Query: 180 PKVSFTFSTIKSNRYKMN 197 P ++F F+ S +N Sbjct: 204 PNINFVFNRTSSPILDLN 221 Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 42/122 (34%), Gaps = 1/122 (0%) Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 +RI + + + V N +G P + F +F+N R + + Sbjct: 315 KRIYGLKVSNVLQEVVFNNFDDLFFNCKGLISHPNQPCKL-DMFILFVNNRLIDLPNLRR 373 Query: 267 TIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 I Y + V L + + Q+D N+HP K I N I I + I Sbjct: 374 MIFNTYNDITNNRYRRFVYLSIFVPYDQIDSNIHPTKKRIMIENQAEIVEQITKFFHDKI 433 Query: 327 NK 328 + Sbjct: 434 TE 435 >gi|156056991|ref|XP_001594419.1| hypothetical protein SS1G_04226 [Sclerotinia sclerotiorum 1980] gi|154702012|gb|EDO01751.1| hypothetical protein SS1G_04226 [Sclerotinia sclerotiorum 1980 UF-70] Length = 845 Score = 199 bits (507), Expect = 9e-49, Method: Composition-based stats. Identities = 74/376 (19%), Positives = 143/376 (38%), Gaps = 42/376 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I LS I+ + + +++ P+ IKELI+N+LDA+++ ++ +I+ ++ DNG Sbjct: 1 MTINALSASTIHLLGSSQVLTTPASLIKELIDNALDAKATCIDILISQNTIDKIEVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+ +++ +R TSK+ + N+ + GFRGEAL S + +++ ++ Sbjct: 61 DGIQLDDLDALGRRGHTSKLRTFTELRNLGGRSLGFRGEALASACQLGDVSITTKTDGQP 120 Query: 117 TGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRR 174 G ++ + I S + GT V V + +P R K I ++++R Sbjct: 121 VGTRVKLKAMGGIQSQSRTSHPIGTTVCVMNFMSKLPVRKQTALKEAPKTIGKIQELVKR 180 Query: 175 MAIAYPKVSFTFSTI-KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE------- 226 A+A + TF + S +G + +S +IG D E + Sbjct: 181 YALARVSIKLTFKIVKGSKGAWSYAPRPHGGIKDSVSLIIGRDAALQCSETSMLFSDLPD 240 Query: 227 ----------------KSNEITLQGYTGIPTFN-RGNANQFYVFINGRTVQD-------- 261 ++ L+ + + Y+ ++ R V Sbjct: 241 HEGLNVLAGVGTANEVAASHFCLKAFLPRNDADLNKLGKGQYLSVDSRPVASERGTMKKI 300 Query: 262 -KFILSTIRTAYAETIPLG--RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI 318 +R+A + P + L + D NV PAK I F N ++ Sbjct: 301 ITIFKKYVRSALTAESSSEKIKNPFIRLNIVCPEASYDPNVEPAKDDIIFENEKLVLEAA 360 Query: 319 IQSIQKAINKKGISTS 334 + + + S Sbjct: 361 EKMFKNFYGECDTVIS 376 >gi|240275443|gb|EER38957.1| conserved hypothetical protein [Ajellomyces capsulatus H143] Length = 187 Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats. Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 11/154 (7%) Query: 2 KIRK-LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 KI+K L +IN+IAAGEII P A+KELIENS+DA ++ VE ++ GG QITDNG Sbjct: 32 KIQKALDPDVINKIAAGEIIVAPMHALKELIENSVDAGATSVEILVKDGGLKLLQITDNG 91 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +++ + +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ Sbjct: 92 HGIDCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCA 151 Query: 119 AQIAISGEKISS--------VRPVAMNPGTIVEV 144 + S K+ +P A GT + V Sbjct: 152 WRAHYSDGKLVPAKPGQTAEPKPTAGRGGTQITV 185 >gi|295670317|ref|XP_002795706.1| DNA mismatch repair protein Mlh1 [Paracoccidioides brasiliensis Pb01] gi|226284791|gb|EEH40357.1| DNA mismatch repair protein Mlh1 [Paracoccidioides brasiliensis Pb01] Length = 763 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 81/357 (22%), Positives = 151/357 (42%), Gaps = 16/357 (4%) Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ + +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ + Sbjct: 33 IQCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAWK 92 Query: 121 IAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 + K+ +P A GT + V DLF+ IP R +S E I DV+ Sbjct: 93 AHYNDGKLVPAKPGQSAEPKPTAGRGGTQITVEDLFYNIPTRRRAFRSSSEEYAKILDVV 152 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN--E 230 R A+ V+ + ++ + + +RI Q+ G + V N + Sbjct: 153 GRYAVHCSGVAVSCKKHGDAGVSISTSTNSTTV-DRIRQIHGSAVASELVNFNVEDPGLG 211 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 G+ ++ +FIN R+V+ + I Y+ +P G +P L LEI Sbjct: 212 FRASGWVSNANYH-VKRTTILLFINHRSVESSTVRRAIEQTYSNFLPKGGHPFTYLDLEI 270 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 +P++VDVNVHP K + F N I + I +IQ+ + +S + + ++ + Sbjct: 271 EPQRVDVNVHPTKREVNFLNEDEIISSICTAIQQQLATVD--SSRTFMVQTLLPVGRNQS 328 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 + + + L + + L D T + + + + + Sbjct: 329 TLSSNAEGNSMNDKPPTSRTLSGTKRPYENNLVRTDATMRKITSMLPPASSQSTPIL 385 >gi|253744803|gb|EET00953.1| Mlh1-like protein [Giardia intestinalis ATCC 50581] Length = 794 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 91/487 (18%), Positives = 171/487 (35%), Gaps = 71/487 (14%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I L + + ++AAGE+I+RP A KELIEN+ DA++ + ++ + D Sbjct: 1 MPQIHLLDPETVAKMAAGEVIQRPFNAAKELIENATDADAPAIGLFVSNNCYDLIMVYDT 60 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ + P+ R TSKI+ +D +I +FGFRGEAL SI VS + ++S+ Sbjct: 61 GHGIELADYPLLCHRFATSKITTFNDIYSIQSFGFRGEALASISYVSRMIVISKVENQPA 120 Query: 118 GAQIAIS------------GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVET 165 + ++ + N TI+ V DLF+ R N ++S + Sbjct: 121 HLAVYMNGKLHFDPETLAAEYTDFFTNTLVSNSFTIICVTDLFYADSIRRNQIRSSKASL 180 Query: 166 NLITDVIRRMAIAYP-KVSFTFSTIKS--------NRYKMNFQSTNGNFPERISQVIGED 216 ++ ++ A + + + +F + ++ S + I + Sbjct: 181 DMQDLLMSISAANHTREYAISFISDSQATQRELQAWLDDIHTTSGMLSLISNIIESRVTA 240 Query: 217 FINNAVELNEKSNEITLQGYT--------GIPTFNRGNANQFYV---------------- 252 V + L +P + Sbjct: 241 LHFKPVTTRYERLLQVLTALLNQTRSSGNTMPQVHSITKEHLCNTCSELSFYFTESVDHS 300 Query: 253 -----------FINGRTVQDKFILSTIRTAYAETIP-LGRYPVVVLLLEIDPRQVDVNVH 300 FINGR VQ + S +++ + +L + +P D NVH Sbjct: 301 QQNRRLSNLLIFINGRGVQYPRLKSAVQSVIDVYLSAFSTIQAGILWIVTEPGGCDPNVH 360 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA- 359 P+K + I + II + + + + L + + + + + Sbjct: 361 PSKERVLLIEEEAIYSAIIDMLTEHMKVHYMKEVEPLLSQPRLKLQPQSTYSSSMRRSRQ 420 Query: 360 ------TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 + T L+ Q + ST +L D+ + N + E + A + Sbjct: 421 LVNTLDPTPKGTSSPLYKQRHDSSTISILRFDNIQRAPCNKEIPE----VHAPLPCSAPL 476 Query: 414 HQNYIIS 420 H + + Sbjct: 477 HLPFESN 483 >gi|225431413|ref|XP_002272829.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1245 Score = 199 bits (505), Expect = 2e-48, Method: Composition-based stats. Identities = 83/367 (22%), Positives = 158/367 (43%), Gaps = 30/367 (8%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M+ I+ L E + + + +G I+ + ++ELI NSLDA +++V ++ G + ++ D+ Sbjct: 1 MRSIKPLPEAVHSSVRSGIILFDLTRVVEELIYNSLDAGATKVSVSVSVGTC-YIKVVDD 59 Query: 60 GFGMTSEEIPMAVQRHCTSKISDDFS---NIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+T + + + +R+ TSK+ +FGFRGEAL SI VS L ++++ Sbjct: 60 GTGVTRDGLVLLGERYATSKLHHLTEMDAATGSFGFRGEALGSISDVSLLEIVTKTQGRP 119 Query: 117 TGAQIAISGEKISS--VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNL-ITDVIR 173 G + + G K + + GT V VRDLF+ P R +L+S + + + Sbjct: 120 NGYRKVMKGCKCLYLGIDDDRQDVGTTVVVRDLFYNQPVRRKYLQSSPKKVLHSVKKCVF 179 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 R+A+ + VSF I+S+ ++ ++ + + +G + ++ ELN + L Sbjct: 180 RIALVHSNVSFKVVDIESDD-ELLCTKSSSSPLSLLISGLGIEDSSSLHELNITDGILKL 238 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG-------------- 279 GY P V IN R + I + Sbjct: 239 SGYVSGPCNTFS----IKVDINSRFICKGPIHKLLNQLATGFKSFDPWKASSGSQDKKRS 294 Query: 280 ---RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 YP +L L D+ P+++ + F++ I F+ +++ + ++ S Sbjct: 295 RCQGYPTYILNLRCPQSHYDLTFEPSRTAVEFKDWVPILAFLEKAVTRFWSEHIAHGESS 354 Query: 337 LSKKMIS 343 + S Sbjct: 355 VHANKTS 361 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 17/191 (8%) Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI-IDLLEG 468 Q+ + +I L I+DQHAA ER+ E++RQ S ++ + T L E + L E Sbjct: 1009 LQQVDKKFIPVVADGTLAIIDQHAADERIRLEELRQKVLSGEVKTITYLDAEQELVLPEI 1068 Query: 469 ECALIMEHDEDLHRLGIKAERFGPNA----------------IAIREIPAILSKKNIPQL 512 L+ + E + G N+ I + +P IL Sbjct: 1069 GYQLLHTYAEQIQNWGWICNIHAQNSRSFTKNLDLLHKKPTVITLLAVPCILGVNLSDVD 1128 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 L + + ++ D+ + T+ + +L AC G+I G + E + ++ E+++ Q Sbjct: 1129 LLEFLQQLADTDGSSTMPPSVLRVLNLKACRGAIMFGDALLPSECSLIVEELKRTSLCFQ 1188 Query: 573 CNHGRPTFIKL 583 C HGRPT + L Sbjct: 1189 CAHGRPTTVPL 1199 >gi|71033271|ref|XP_766277.1| DNA mismatch repair protein MLH1 [Theileria parva strain Muguga] gi|68353234|gb|EAN33994.1| DNA mismatch repair protein MLH1, putative [Theileria parva] Length = 892 Score = 198 bits (504), Expect = 2e-48, Method: Composition-based stats. Identities = 63/198 (31%), Positives = 108/198 (54%), Gaps = 3/198 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L ++I +IAAGEII RPS AIKELIENS+DA ++ + + F +I DNG G Sbjct: 7 IRPLPPEVIKKIAAGEIIARPSSAIKELIENSIDAGATEIRVNLGSNPLDFCEIIDNGSG 66 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 ++ +++ + QR+ TSK ++ + + GFRGEAL S+ +H+T+ SR + + Sbjct: 67 VSEQDMLIICQRYTTSKTTNSIEGVRSLGFRGEALSSLSQNAHVTISSRTESDAMRTIMT 126 Query: 123 ISGEK--ISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAY 179 S + + VR G ++ +LF+ R + L + E ++++ +I + Sbjct: 127 YSECEPVLDEVRYEDGPVGFHLKYENLFYNYEIRSKSLLSNINSEFISCLHLVQKYSIHF 186 Query: 180 PKVSFTFSTIKSNRYKMN 197 P ++F F+ S+ +N Sbjct: 187 PNINFVFNRTNSSILDLN 204 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 1/117 (0%) Query: 207 ERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS 266 +RI + + + V N + +G P + F +F+N R + + Sbjct: 295 KRIYGLKVSNVLQEVVFNNFDNLFFNCKGLISHPNQPCKL-DMFILFVNNRLIDLPHLRR 353 Query: 267 TIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ 323 I ++Y + V L + I ++D N+HP K I N I + II+ Sbjct: 354 MIFSSYNDISNNRYRRFVYLSIFIPYDKIDSNIHPTKKKIMIENQAEIVDQIIKFFH 410 >gi|300123479|emb|CBK24751.2| unnamed protein product [Blastocystis hominis] Length = 789 Score = 198 bits (504), Expect = 2e-48, Method: Composition-based stats. Identities = 93/397 (23%), Positives = 163/397 (41%), Gaps = 20/397 (5%) Query: 30 LIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNI 87 +IENS+DA ++ + I+ GG QI DNG G+ E++P+ +R+ TSK+ DD S I Sbjct: 1 MIENSIDAHATNIIISISHGGLKQMQIQDNGDGILKEDLPILCERYTTSKLRILDDLSTI 60 Query: 88 HTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSV--RPVAMNPGTIVEVR 145 TFGFRGEAL SI VS + ++++ + G + G ++ VA GT + V Sbjct: 61 QTFGFRGEALASISTVSRVMVVTKRESDICGWKARYRGNELIDGKLEAVASTKGTSITVD 120 Query: 146 DLFFTIPARLNFL-KSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN 204 DLF+TIP+R E ET I +++ +I Y +F + + + Sbjct: 121 DLFYTIPSRQTMYLGKESEETKQIVSLLQLFSIHYAPQGISFLLKEIPNRVLFKSPRCAS 180 Query: 205 FPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFY------VFINGRT 258 + I+ V+G + + ++ + + +F+NGR Sbjct: 181 LEDSIAGVLGSAIRPTLRRIRVERESGVECPFSAEIVLSPKSPIPISPAVSFVLFVNGRA 240 Query: 259 VQDKFILSTIRTAYAETIPL--------GRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRN 310 +Q+ + IR + + + LEID R VDVNVHP K + F + Sbjct: 241 IQNSRLRQGIRRVLEQYYYCSDSNSRSRNQSQFCYVSLEIDTRMVDVNVHPNKREVCFLD 300 Query: 311 PTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD-NAPKTHLPKYATSLTNTQEKL 369 + I+++++ I++ + D ++ K + + Sbjct: 301 EDYVVKRIVETVETEIDRALSLQAVGKVTPTKGVSRGDGVCAQSASKKVRVDYSQRTIQF 360 Query: 370 FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 QEN + +D ++ + V A Sbjct: 361 ATQENSICLDDSWMGEESADPARDSAVSTVSAVSPIH 397 >gi|328791360|ref|XP_003251553.1| PREDICTED: PMS1 protein homolog 1-like [Apis mellifera] Length = 291 Score = 198 bits (504), Expect = 2e-48, Method: Composition-based stats. Identities = 72/324 (22%), Positives = 142/324 (43%), Gaps = 50/324 (15%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + + I ++I S A KELIEN+LDA + +E + G + ++ D+G Sbjct: 1 MTISALDKDTVKLITTTQVITSISTAAKELIENALDAGAKNIEINLIDNGCTLIEVKDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+++ + P TSK+ D ++ T+GFRGEAL ++ +VS+LT++++ Q+ Sbjct: 61 NGISNVDTPYMALSSYTSKLCSFSDLDSLETYGFRGEALHALSSVSNLTIITKTEQDEAA 120 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 I I + P + GT V+V+++F +P R Sbjct: 121 ISYTIDHYGCILNSEPCHRSTGTTVQVKEIFKQMPVRRQI-------------------- 160 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + + + +F E I+ ++G+ N ++ +I ++ Sbjct: 161 ------------------ITKKPSTNSFEESIAYILGKKITCNMDWIDITDTDIKMKLMV 202 Query: 238 G----IPTFNRGNANQFYVFINGRTVQDKFIL----STIRTAYAETIPLGRYPVVVLLLE 289 F ++ Y+F+N R ++ K + I A+ + + + P+ V+ + Sbjct: 203 PLKTVKNDFELFQSDSQYIFVNNRPIKYKELEKIVIKIILEAFGQELSRKK-PIFVIYIL 261 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTI 313 I+ +DVN+ P K+++ F+ Sbjct: 262 INAANIDVNLDPNKNFVLFKEQRS 285 >gi|4239950|dbj|BAA74753.1| PMS2L13 [Homo sapiens] gi|119596966|gb|EAW76560.1| hCG2023604, isoform CRA_b [Homo sapiens] Length = 389 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 3/184 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++ NG G Sbjct: 164 IKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 223 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 224 VEEENFEGLTLKHHTSKIQEFADLPQVETFGFRGEALSSLCALSDVTISTCHVSAKVGTR 283 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + KI P G V V+ LF T+P + + + Sbjct: 284 LVFDHYGKIIQKTPYPHPRGMTVSVKQLFSTLPVHHKEFQRNIKKKRACFPFAFCRDCQF 343 Query: 180 PKVS 183 P+ S Sbjct: 344 PEAS 347 >gi|1304121|dbj|BAA07511.1| PMS3 [Homo sapiens] gi|1407577|dbj|BAA07470.1| hPMS3 [Homo sapiens] Length = 256 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 3/184 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++ NG G Sbjct: 31 IKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 90 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 91 VEEENFEGLTLKHHTSKIQEFADLPQVETFGFRGEALSSLCALSDVTISTCHVSAKVGTR 150 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + KI P G V V+ LF T+P + + + Sbjct: 151 LVFDHYGKIIQKTPYPHPRGMTVSVKQLFSTLPVHHKEFQRNIKKKRACFPFAFCRDCQF 210 Query: 180 PKVS 183 P+ S Sbjct: 211 PEAS 214 >gi|160419154|sp|A4D2C0|PMS4L_HUMAN RecName: Full=Postmeiotic segregation increased 4-like protein gi|51094588|gb|EAL23840.1| similar to PMS4 [Homo sapiens] Length = 255 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 3/184 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++ NG G Sbjct: 30 IKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 89 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 90 VEEENFEGLTLKHHTSKIQEFADLPQVETFGFRGEALSSLCALSDVTISTCHVSAKVGTR 149 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + KI P G V V+ LF T+P + + + Sbjct: 150 LVFDHYGKIIQKTPYPHPRGMTVSVKQLFSTLPVHHKEFQRNIKKKRACFPFAFCRDCQF 209 Query: 180 PKVS 183 P+ S Sbjct: 210 PEAS 213 >gi|160419152|sp|A4D2B8|PM2P1_HUMAN RecName: Full=Putative postmeiotic segregation increased 2-like protein 1; AltName: Full=PMS2-related protein 2; AltName: Full=Postmeiotic segregation increased 2-like protein 13; AltName: Full=Postmeiotic segregation increased 2-like protein 6; AltName: Full=Postmeiotic segregation increased 2-like protein 8; AltName: Full=Postmeiotic segregation increased protein 3; Short=hPMS3; AltName: Full=Postmeiotic segregation increased protein 8; AltName: Full=Putative postmeiotic segregation increased 2 pseudogene 1 gi|51094586|gb|EAL23838.1| postmeiotic segregation increased 2-like 1 [Homo sapiens] Length = 440 Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 3/184 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++ NG G Sbjct: 215 IKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 274 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 275 VEEENFEGLTLKHHTSKIQEFADLPQVETFGFRGEALSSLCALSDVTISTCHVSAKVGTR 334 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + KI P G V V+ LF T+P + + + Sbjct: 335 LVFDHYGKIIQKTPYPHPRGMTVSVKQLFSTLPVHHKEFQRNIKKKRACFPFAFCRDCQF 394 Query: 180 PKVS 183 P+ S Sbjct: 395 PEAS 398 >gi|308503723|ref|XP_003114045.1| CRE-PMS-2 protein [Caenorhabditis remanei] gi|308261430|gb|EFP05383.1| CRE-PMS-2 protein [Caenorhabditis remanei] Length = 831 Score = 198 bits (503), Expect = 3e-48, Method: Composition-based stats. Identities = 80/384 (20%), Positives = 157/384 (40%), Gaps = 55/384 (14%) Query: 2 KIRKLSEKIINQIA-AG--------------EIIERPSIAIKELIENSLDAESSRVETVI 46 KI K+S+ + ++ A +++ S A+++LI+NS+DA ++ ++ + Sbjct: 5 KIEKISKDVAERLTTAQVLKFFTFYVKIELLQVVVSLSSALRQLIDNSIDAGATIIDIRV 64 Query: 47 AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVS 104 G ++ DNG G+ S + H TSK++ DF + T GFRGEAL ++ VS Sbjct: 65 KNNGFDSIEVQDNGSGIESHNFDALCKAHSTSKLTQFSDFDKLATLGFRGEALNALCTVS 124 Query: 105 HLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQ 162 +++ +R + G ++ I+ + A GT + V LF T+P R ++++ Sbjct: 125 SVSIFTRAADSEIGTRLTYDHSGSITERQSAARELGTTIIVNKLFETLPVRRKELERNQK 184 Query: 163 VETNLITDVIRRMAIAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 E + ++ A+ P V + + + + ++ + G + N Sbjct: 185 REFVKLLSTVQSFALLCPHVKILCTNNIAGKKTNIICTPGGTSSVQDVVTNLFGSRRVEN 244 Query: 221 --------------------------AVELNEKSNEITLQGYTGIPTFNRGN--ANQFYV 252 +E ++G+ G +++ +V Sbjct: 245 SKAGSSALIPILQEQPDFEIMTMHSIPMEETHFFELFKIRGFVSNCEHGCGRGTSDRQFV 304 Query: 253 FINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPT 312 +IN R V+ + + I Y + +YP++VL ++ +DVNV P K + Sbjct: 305 YINNRPVEYTRVCTVINDVYKQF-NKSQYPIIVLFID-----IDVNVTPDKKTVMLEKER 358 Query: 313 IIRNFIIQSIQKAINKKGISTSSV 336 + I S+ K K S S+V Sbjct: 359 HLLAVIRASMMKTYLKIVGSHSTV 382 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 66/284 (23%), Positives = 112/284 (39%), Gaps = 14/284 (4%) Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 + I I +S +N S +S +S+ ++ + L + + Sbjct: 543 DDGIEIIEPIQESQDVVLNDSQCSQNSQVSQYLLRPQQKIKFSMRRLLDVYARHIDVNPE 602 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESE------ATHYQLGIACAQIHQNYIISQT 422 +QE ND L + ++ E + + Q + +II + Sbjct: 603 --VQEEDTHENDALDEITTGFKKEESCDAERQLSRSLTKEDFTNMKVIGQFNHGFIICRL 660 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 L IVDQHA+ E+ FE+++ NS K+T Q L TP + + +I E+ Sbjct: 661 RGHLFIVDQHASDEKYNFERLQ---NSAKLTKQPLFTPTALGFGSVQELIIRENLPIFQA 717 Query: 483 LGIKAE-RFGPNAIA--IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT 539 G E R + + P +L+++ L +I+ + D RI NI A+ Sbjct: 718 NGFDFEFRENDGCLKTFLTARPELLNQQLTNSDLEEILAVVSDYPNQMYRPVRIRNIFAS 777 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 AC S+ G+ + EM R++R + K C HGRPT L Sbjct: 778 KACRKSVMIGKPLDQREMTRIIRHLAKLDQPWNCPHGRPTIRHL 821 >gi|226294058|gb|EEH49478.1| DNA binding protein [Paracoccidioides brasiliensis Pb18] Length = 758 Score = 198 bits (503), Expect = 3e-48, Method: Composition-based stats. Identities = 84/333 (25%), Positives = 146/333 (43%), Gaps = 14/333 (4%) Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + +++ + +R TSK+ +D S+I T+GFRGEAL SI ++HLT+ ++ ++ + Sbjct: 33 IQCDDLGILCERFTTSKLKAFEDLSSIGTYGFRGEALASISHIAHLTVTTKTAGSSCAWK 92 Query: 121 IAISGEKISS--------VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 S K+ +P A GT + V DLF+ IP R +S E I DV+ Sbjct: 93 AHYSDGKLVPAKPGQSAEPKPTAGRGGTQITVEDLFYNIPTRRRAFRSSSEEYAKILDVV 152 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN--E 230 R A+ V+ + + ++ + + +RI Q+ G + V N + Sbjct: 153 CRYAVHCSGVAVSCKKHGDSGVSISTSTNSTTV-DRIRQIHGSAVASELVTFNVEDPGLG 211 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 G+ ++ +FIN R+V+ + I Y+ +P G +P L LEI Sbjct: 212 FRASGWVSNANYH-AKRTTILLFINHRSVESSAVRRAIEQTYSNFLPKGGHPFTYLDLEI 270 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 +P++VDVNVHP K + F N I + I +IQ+ + S + ++ + Q Sbjct: 271 EPQRVDVNVHPTKREVNFLNEDEIFSSICTAIQQQLATVDSSRTFMVQTLLPVGRSQSTV 330 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 + + + N EN L D+ Sbjct: 331 EGSSMNDKPPTSRNLSGTKRPYENNLVRTDVTM 363 >gi|315040135|ref|XP_003169445.1| hypothetical protein MGYG_08349 [Arthroderma gypseum CBS 118893] gi|311346135|gb|EFR05338.1| hypothetical protein MGYG_08349 [Arthroderma gypseum CBS 118893] Length = 741 Score = 197 bits (502), Expect = 3e-48, Method: Composition-based stats. Identities = 86/398 (21%), Positives = 160/398 (40%), Gaps = 35/398 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L E + I + + PS +KEL++N+LDA ++ V I+ Q+ DNG Sbjct: 1 MTIVALGESTVRAIGSTSALPDPSSVVKELLDNALDAGATSVLVEISVNTLDIIQLKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNI--HTFGFRGEALPSIGAVSH-LTLMSRPPQN 115 G+ + A +R+ TSKI +D + T GFRG+AL SI +S+ + +++R P+ Sbjct: 61 SGILPSDRSFACKRNYTSKIQTKEDLCRVGGKTLGFRGQALASIAEMSNSVCIITRVPEE 120 Query: 116 NTG-AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIR 173 S P + GT V V D +P R K+ I +++ Sbjct: 121 QVAKTVKFGRDGTPLSDTPTSHPVGTTVCVCDFLKPLPVRRQEVEKTSAKCILTIKKLLQ 180 Query: 174 RMAIAYPKVSFTFSTIK-SNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL-------- 224 R IA P+ + +K ++ + STN + + IS+VIG +++ + Sbjct: 181 RYVIARPRTRLSLRLLKSRDKDWIYAPSTNPSVCDAISKVIGSAVVSSCISNNSVYPILG 240 Query: 225 ---------NEKSNEITLQGYTGIPTFNRGNA---NQFYVFINGRTVQD-----KFILST 267 N + I + P +V I+GR + + ++ Sbjct: 241 EESGSDSVVNHNTPIIHMSVIVPKPFAECVPNINYKGQFVVIDGRPLLTSRGFGREVVKL 300 Query: 268 IRTAYAETI--PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKA 325 ++ Y +T+ P P + L L P D+++ P+K I F + + + I ++ + Sbjct: 301 FKSCYKQTMDRPKLEDPFLFLSLSCPPGIYDISIEPSKDDILFEDHQAVLHVIERAFKDI 360 Query: 326 INKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLT 363 + ++ S + +Q + + Sbjct: 361 YKPETLTVISNPDTRQGRPGNQSVVGISSPGSTSNGSN 398 >gi|254253155|ref|ZP_04946473.1| DNA mismatch repair enzyme [Burkholderia dolosa AUO158] gi|124895764|gb|EAY69644.1| DNA mismatch repair enzyme [Burkholderia dolosa AUO158] Length = 170 Score = 197 bits (501), Expect = 4e-48, Method: Composition-based stats. Identities = 59/168 (35%), Positives = 95/168 (56%) Query: 427 VIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK 486 +IVD HAAHER+++E+ + + Q LL P + E + E E L LG Sbjct: 1 MIVDMHAAHERILYEQFKNALADRSVAVQPLLLPVSMTATPVEIGTVEEERETLESLGFD 60 Query: 487 AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 P +AIR +PA+L ++ L R ++ ++ + L +R +L T+AC+ ++ Sbjct: 61 LAVLSPTTLAIRAVPALLKDADLQSLARAVLADLHAFGGSRVLTERQHELLGTLACHHAV 120 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 R+ R++ EMN LLR+ME + QCNHGRPT+ +L L+D+++LF R Sbjct: 121 RANRRLTLDEMNALLRQMEATERADQCNHGRPTWYQLTLNDLDRLFMR 168 >gi|300865542|ref|ZP_07110324.1| DNA mismatch repair protein (fragment) [Oscillatoria sp. PCC 6506] gi|300336456|emb|CBN55474.1| DNA mismatch repair protein (fragment) [Oscillatoria sp. PCC 6506] Length = 320 Score = 197 bits (501), Expect = 4e-48, Method: Composition-based stats. Identities = 97/353 (27%), Positives = 156/353 (44%), Gaps = 47/353 (13%) Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 +R A+ V +NGR V+ + TI TA+ T P RYP+ + +IDP Q+D N HP Sbjct: 5 CHRRRADWVKVAVNGRIVRSPELEQTILTAFGRTCPRDRYPICFIHFQIDPEQIDWNRHP 64 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 AK+ I N T + I +I +A+ ++ + +M K PK Sbjct: 65 AKAEIYLHNMTYWQEQIGVAIARALQL-----NAEIMPEMPLPERVGKLLKASEPKSGYH 119 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 + + + E S++DL + A AQ+H YI+++ Sbjct: 120 VNRSIQPNADGEPGKSSSDLGLME---------------------LRAIAQVHNTYILAE 158 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 G+ +V+QH AHER+++E++ + + +L L ++L Sbjct: 159 HPSGMWLVEQHIAHERVLYEQLCYAWQLVPLEPPVIL-----------NQLSPTQVDNLQ 207 Query: 482 RLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 RLG++ E FG A R PA+L+K++ D D + + S LQ +AT A Sbjct: 208 RLGLEIEPFGEQLWAARSAPALLAKRD------DCQDALTEISKVGDLQTAQ---VAT-A 257 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C +IR+G + EM LL + N C HGRP F+ L+ S + + F R Sbjct: 258 CRSAIRNGTALTLQEMQTLLDRWKSTRNPRTCPHGRPIFLSLEESALARFFRR 310 >gi|114615151|ref|XP_001144370.1| PREDICTED: similar to Chain A, N-Terminal 40kda Fragment Of Nhpms2 Complexed With Adp [Pan troglodytes] Length = 352 Score = 197 bits (501), Expect = 4e-48, Method: Composition-based stats. Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 3/162 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 186 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 245 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H T KI + D + + TFGF+GEAL S+ A+S +T+ + G + Sbjct: 246 VEEENFEGLTLKHHTCKIQEFADLTEVETFGFQGEALSSLCALSDVTISTCHASAKVGTR 305 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE 161 + + KI P GT V V+ LF +P R + Sbjct: 306 LVFDHDGKIIQKTPYPHPRGTTVSVKQLFSALPVRHKEFQRN 347 >gi|322698004|gb|EFY89778.1| DNA mismatch repair protein, putative [Metarhizium acridum CQMa 102] Length = 883 Score = 197 bits (500), Expect = 5e-48, Method: Composition-based stats. Identities = 71/383 (18%), Positives = 149/383 (38%), Gaps = 35/383 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + + + + I P +KEL++N+LD+ ++ VE ++ + DNG Sbjct: 1 MAIHPLPQSTVRLLGSSMNITAPYDLVKELLDNALDSRATAVEITVSSNTIDRISVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIH----TFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+ ++ +R TSK+ + I T GFRGEAL S ++++++++++ P + Sbjct: 61 SGIDIDDFSALGRRAHTSKLREYSELIKLGGTTLGFRGEALASANSIANISIITKRPGDP 120 Query: 117 TGAQIAISGEK--ISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 +I + + RPV+ GT V V LF +P R + K + I ++R Sbjct: 121 IAWRIELVPGTGGVQDKRPVSSTIGTTVAVTRLFENLPPRRQYALKQAKNCIAQIQQLLR 180 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNF-PERISQVIGEDFINNAVELNEKSN--- 229 + A P + + I ++ + + E I Q++G + + N +E+ E+ + Sbjct: 181 KYVFARPNIKMSLKIIGDSKPLWTYSPKPPDLKREAILQILGANGMVNCIEVYEEVDINR 240 Query: 230 ------------EITLQGYTGIPTFNRGNANQF--YVFINGRTVQ----------DKFIL 265 GY P + ++ I+ R + Sbjct: 241 ESTSQMEAEEAARWVFSGYIQKPYIIPKDFKVQGAHLSIDNRPMSAAWHVAKKMASILKS 300 Query: 266 STIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKA 325 R+ ++ + + + P D N+ K + + + ++A Sbjct: 301 HISRSTAPKSAERHGGVFLQINIRCPPCSYDPNITMKKDELLIFEEKGLLDGFELVCKRA 360 Query: 326 INKKGISTSSVLSKKMISSFHQD 348 K + +++ +S+ D Sbjct: 361 YEKHSRALAAIHPPATLSTQPHD 383 >gi|145250979|ref|XP_001397003.1| DNA mismatch repair protein [Aspergillus niger CBS 513.88] gi|134082530|emb|CAK42446.1| unnamed protein product [Aspergillus niger] Length = 848 Score = 197 bits (500), Expect = 6e-48, Method: Composition-based stats. Identities = 85/338 (25%), Positives = 138/338 (40%), Gaps = 28/338 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + I + +I P +KEL++N+LDA ++ V I+ Q+ DNG Sbjct: 1 MPIAALPLAAVRAIGSASVISDPCSIVKELLDNALDAAATSVLIEISQNTLDVIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVSH-LTLMSRPPQN 115 G+ S + P +R TSKI +D I + GFRGEAL S VS +T+ +R Sbjct: 61 HGIPSTDHPFVCKRTFTSKIQSVEDLRTIGGKSLGFRGEALASAAEVSRGVTITTRLQHE 120 Query: 116 NTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 G+ I S ++ S + + GT V + DLF IP R K I +++ Sbjct: 121 PVGSSIRYSRNGELLSTQRASHPVGTSVRIADLFKHIPVRRQTTLKKAAKTVVRIKKLVQ 180 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN---FPERISQVIGEDFINNAVELNE---- 226 AIA P + +K+ N+ GN + + +V+G + ++ + Sbjct: 181 AYAIAQPSKRLSLKVLKAKTETNNWMYAPGNNTSLVDAVLKVVGTEVASSCLVKVWPSEN 240 Query: 227 -KSNEITLQGYTGIP--TFNRGNANQFYVFINGRT-VQDKFILSTIRTAYAETIPLGRY- 281 + + P + N Y+ I+GR + I I Y I + Sbjct: 241 DSDRPFRILAFLPKPESDLTKLNGLGQYISIDGRPLSTTRGIAQDIAKLYKSYIRVVASS 300 Query: 282 ---------PVVVLLLEIDPRQVDVNVHPAKSYIRFRN 310 P++ L L+ DVN+ PAK + + Sbjct: 301 KEAAINITDPLLCLHLQCTNASYDVNIEPAKDDVLLED 338 >gi|114618435|ref|XP_001175220.1| PREDICTED: similar to PMS3 [Pan troglodytes] Length = 298 Score = 196 bits (499), Expect = 7e-48, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 91/184 (49%), Gaps = 3/184 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++D+G G Sbjct: 90 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDSGCG 149 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H T KI + D + + TFGF+GEAL S+ A+S +T+ + G + Sbjct: 150 IEEENFEGLTLKHHTCKIQEFADLTEVETFGFQGEALSSLCALSDVTISTCHASVKVGTR 209 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + KI P GT V V+ LF T+P R + + + Sbjct: 210 LVFDHDGKIIQKTPYPHPRGTTVSVKQLFSTLPVRHKEFQRNIKKKRACFPFAFCRDCQF 269 Query: 180 PKVS 183 P+ S Sbjct: 270 PEAS 273 >gi|115871977|ref|XP_780519.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 1782 Score = 196 bits (499), Expect = 7e-48, Method: Composition-based stats. Identities = 80/386 (20%), Positives = 160/386 (41%), Gaps = 43/386 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ LS+ + NQ+ +G ++EL+ NS+DA +S + + Q+ DNG Sbjct: 8 PIQYLSQDVKNQLRSGIATPSVVQCVEELVVNSIDAGASCIAVRVDLPDCK-VQVVDNGR 66 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTG 118 G+T +++ +R+ TSK D D NI +G+RGEAL SI +S L + SR + Sbjct: 67 GITKDDMLYVGERYATSKCHDTKDLENISHYGYRGEALASIKEISSVLEISSRARGSEVT 126 Query: 119 AQIAISGEK---ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 K IS V + GT V ++F+ +P R L S + I ++ + Sbjct: 127 YSKLYRHGKDQGISKHSKVRPSGGTTVAAHNVFYNLPVRRKVLCSP-LVYEQICKRLQAI 185 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 ++ +P++S T + + ++ + + + G+D + E+N + G Sbjct: 186 SLIHPQISLTLRNDSTGVKSIQTHNS-SSIVQTFGYLFGKDVADCLKEVNHIRTIFNVSG 244 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI------------------- 276 + G + N + +V++NGR V I I + ++ Sbjct: 245 FIGS--TSFRNKSLQFVYVNGRLVLKTKIHKLINELLSNSLVTKSKGKNQDTALGYTMKS 302 Query: 277 -------------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ 323 Y + VL + + D+ + P+K+ I FR+ + + + Sbjct: 303 NAASSTCQPSPGGNQVEYGIFVLNITCPRSEYDITLDPSKTLIEFRDWEGAVTCVHELVT 362 Query: 324 KAINKKGISTSSVLSKKMISSFHQDN 349 ++++ ++ +++K + Q+ Sbjct: 363 SFLHREHLTMKLTVTQKGSEAGLQER 388 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 65/398 (16%), Positives = 125/398 (31%), Gaps = 56/398 (14%) Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 + + +RG F +++ + + ++ +V + + Sbjct: 1211 WYSVYDVSRGMKVFINRFNGNCSMEKPEEGPGMNQEARQISEDTQFSMVTKSDTLAHPHL 1270 Query: 296 DVNVHP------AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS--SVLSKKMISSFHQ 347 + P K + + + +I A+ + S++ S Sbjct: 1271 PHSAAPFVTSLRDKKESSHSRDPPVTHATMATIDAAMEESQEEDDELSMVKWGNSSQISG 1330 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 P + S FL N + + + + + Sbjct: 1331 KGCATDEAPHFLKSDQAETGCRFLTSNVSEGLSSVDAKFQAMVLSSLNPCQFTKAMFNSI 1390 Query: 408 IACAQIHQNYIISQTTDG-----------LVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 Q+ +I L++VDQHAAHER+ E + Sbjct: 1391 KVLGQVDTKFIACLVNSDYDKNPAGESNLLILVDQHAAHERIRLEML------------- 1437 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI------- 509 + I L E L+ + + R+GI+ G +A + +PA +K Sbjct: 1438 -IQALRIGLSPSELRLLEAYSPKMKRIGIEYTLSGDSA-MVTHLPACFVEKEANELKRGR 1495 Query: 510 --------PQLLRDIIDEI-IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 L+++++D I S +L I IL + AC+G+I+ G + E L Sbjct: 1496 QTIATSMAETLIKEVLDSIQHQSGAVSSLPKTITRILNSQACHGAIKFGDTLDRDECKTL 1555 Query: 561 LREMEKNPNSSQCNHGRPTFIKL-KLSDI-----EKLF 592 + ++ QC HGRP + + I EK F Sbjct: 1556 IGQLSSCDLPFQCAHGRPALMPIFDFKKIKHGVSEKFF 1593 >gi|221483356|gb|EEE21675.1| hypothetical protein TGGT1_069560 [Toxoplasma gondii GT1] Length = 597 Score = 196 bits (499), Expect = 8e-48, Method: Composition-based stats. Identities = 74/329 (22%), Positives = 135/329 (41%), Gaps = 31/329 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++ +S + + + +++ KEL+EN++DA ++ VE GG + ++ DNG Sbjct: 212 RLHAMSSLVAEAVCSQQVVLGLKSICKELVENAIDAGATTVEVRFVDGGMASVEVRDNGS 271 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++ PM +RH TSKI+ D + + T GFRGEAL S+ A+S + +++R Sbjct: 272 GIAPQDFPMLGRRHATSKINKFTDLYSALDTMGFRGEALASLCALSDVEILTRTASEPFA 331 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIP-ARLNFLKSEQVETNLITDVIRRMA 176 ++ KI P A GT V V +LF ++P R + Q +++ A Sbjct: 332 TRLRFDHHGKIIHQEPAAREVGTSVTVSNLFASLPLRRRALRQQRQKHLQESLAFLQKFA 391 Query: 177 IAYPK------VSFT---------------FSTIKSNRYKMNFQSTNGNFPERISQVIGE 215 + + FT S+ +N + T + V GE Sbjct: 392 LLHADDCRILVTDFTPANSSRSAEASSGSQRRNGGSSVTLLNTRGTATRLLDAAVTVYGE 451 Query: 216 DFINNA----VELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKF-ILSTIRT 270 + + E E +++ P + F+N R V+ + I Sbjct: 452 RQMQQCSQVSLAGAEPGREWSVEALLSRPPLGVRTSALQLFFVNKRVVEFPPLLQKLINK 511 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 Y E +P+V+ + P ++VN+ Sbjct: 512 KYREVCSRHCFPIVIAFATVAPHLLEVNL 540 >gi|221507840|gb|EEE33427.1| hypothetical protein TGVEG_061110 [Toxoplasma gondii VEG] Length = 541 Score = 196 bits (498), Expect = 9e-48, Method: Composition-based stats. Identities = 74/329 (22%), Positives = 135/329 (41%), Gaps = 31/329 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++ +S + + + +++ KEL+EN++DA ++ VE GG + ++ DNG Sbjct: 213 RLHAMSSLVAEAVCSQQVVLGLKSICKELVENAIDAGATTVEVRFVDGGMASVEVRDNGS 272 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ ++ PM +RH TSKI+ D + + T GFRGEAL S+ A+S + +++R Sbjct: 273 GIAPQDFPMLGRRHATSKINKFTDLYSALDTMGFRGEALASLCALSDVEILTRTASEPFA 332 Query: 119 AQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIP-ARLNFLKSEQVETNLITDVIRRMA 176 ++ KI P A GT V V +LF ++P R + Q +++ A Sbjct: 333 TRLRFDHHGKIIHQEPAAREVGTSVTVSNLFASLPLRRRALRQQRQKHLQESLAFLQKFA 392 Query: 177 IAYPK------VSFT---------------FSTIKSNRYKMNFQSTNGNFPERISQVIGE 215 + + FT S+ +N + T + V GE Sbjct: 393 LLHADDCRILVTDFTPANSSRSAEASSGSQRRNGGSSVTLLNTRGTATRLLDAAVTVYGE 452 Query: 216 DFINNA----VELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKF-ILSTIRT 270 + + E E +++ P + F+N R V+ + I Sbjct: 453 RQMQQCSQVSLAGAEPGREWSVEALLSRPPLGVRTSALQLFFVNKRVVEFPPLLQKLINK 512 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNV 299 Y E +P+V+ + P ++VN+ Sbjct: 513 KYREVCSRHCFPIVIAFATVAPHLLEVNL 541 >gi|327259325|ref|XP_003214488.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Anolis carolinensis] Length = 1404 Score = 196 bits (498), Expect = 9e-48, Method: Composition-based stats. Identities = 82/354 (23%), Positives = 144/354 (40%), Gaps = 30/354 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L E++ + +G I +EL+ NS+DA+++ V + Q+ DNG G Sbjct: 2 IKCLPEEVQATLRSGVAISSLGQCAEELVFNSIDAKATCVAVRVDLETFK-VQVVDNGCG 60 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M E+I R+ TSK +D N+ +GFRGEAL SI + S L + S+ + T Sbjct: 61 MGREDISKIGNRYFTSKCGSLEDLENLRFYGFRGEALASIANIASILEISSKTRKTATSF 120 Query: 120 QIAISGEK---ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K +S GT V V +LF+ +P R + S +E + I ++ Sbjct: 121 LKMFHNGKGLEVSETEMNRPCAGTTVTVYNLFYNLPVRRKCMNS-SLELERMRHKIEAIS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P VSF+ + + S + R SQ+ E+ KS + G+ Sbjct: 180 LIHPSVSFSLRNDTACSMVLQL-SKTKDLCSRFSQIYSLSKSQKLREVKYKSGGFEIYGF 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTI-------------------RTAYAETIP 277 N N ++++N R + + I + Sbjct: 239 ISTE--GHYNKNIQFLYVNNRLILKTRLHKLIDFLLRKQSTICKTKNGSLQSSPARHRSG 296 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 Y V V+ ++ + DV + PAK+ I FRN + + + I+ + ++ + Sbjct: 297 SEAYGVFVINVKCQYDEYDVCLEPAKTLIEFRNWAALLTCVEEGIKAFLKQEHL 350 Score = 113 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 88/210 (41%), Gaps = 30/210 (14%) Query: 409 ACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQ--------TLLTP 460 +N + LV+VDQHAAHER+ E++ D + + T+ P Sbjct: 1166 CLINTDENEEAVLHGNLLVLVDQHAAHERVRLEQLITDSYEKQSETSGRKKLLASTVCPP 1225 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA---IAIREIPAILSKKNIPQL----- 512 I++ E L+ + L LG++ F N I + ++P ++ +L Sbjct: 1226 LEIEITEDHRRLLRCCHKGLEDLGLEL-FFPENQPSQILVGKVPLCFVEREANELRRGRQ 1284 Query: 513 ------LRDIIDEIIDS-----STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 +++ I E + TL + +LA+ AC+G+I+ + + RL+ Sbjct: 1285 TVAKNIVQEFIQEQAELLQTTGGAQGTLPLTVLKVLASQACHGAIKFNDNLTFEDCCRLM 1344 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 + QC HGRP+ + L +D++ L Sbjct: 1345 ESLSCCQLPFQCAHGRPSMLPL--ADVDHL 1372 >gi|115951372|ref|XP_001185665.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 1628 Score = 196 bits (498), Expect = 1e-47, Method: Composition-based stats. Identities = 80/386 (20%), Positives = 160/386 (41%), Gaps = 43/386 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ LS+ + NQ+ +G ++EL+ NS+DA +S + + Q+ DNG Sbjct: 8 PIQYLSQDVKNQLRSGIATPSVVQCVEELVVNSIDAGASCIAVRVDLPDCK-VQVVDNGR 66 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTG 118 G+T +++ +R+ TSK D D NI +G+RGEAL SI +S L + SR + Sbjct: 67 GITKDDMLYVGERYATSKCHDTKDLENISHYGYRGEALASIKEISSVLEISSRARGSEVT 126 Query: 119 AQIAISGEK---ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 K IS V + GT V ++F+ +P R L S + I ++ + Sbjct: 127 YSKLYRHGKDQGISKHSKVRPSGGTTVAAHNVFYNLPVRRKVLCSP-LVYEQICKRLQAI 185 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 ++ +P++S T + + ++ + + + G+D + E+N + G Sbjct: 186 SLIHPQISLTLRNDSTGVKSIQTHNS-SSIVQTFGYLFGKDVADCLKEVNHIRTIFNVSG 244 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI------------------- 276 + G + N + +V++NGR V I I + ++ Sbjct: 245 FIGS--TSFRNKSLQFVYVNGRLVLKTKIHKLINELLSNSLVTKSKGKNQDTALGYTMKS 302 Query: 277 -------------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ 323 Y + VL + + D+ + P+K+ I FR+ + + + Sbjct: 303 NAASSTCQPSPGGNQVEYGIFVLNITCPRSEYDITLDPSKTLIEFRDWEGAVTCVHELVT 362 Query: 324 KAINKKGISTSSVLSKKMISSFHQDN 349 ++++ ++ +++K + Q+ Sbjct: 363 SFLHREHLTMKLTVTQKGSEAGLQER 388 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 61/383 (15%), Positives = 121/383 (31%), Gaps = 50/383 (13%) Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 + + +RG F +++ + + ++ +V + + Sbjct: 1211 WYSVYDVSRGMKVFINRFNGNCSMEKPEEGPGMNQEARQISEDTQFSMVTKSDTLAHPHL 1270 Query: 296 DVNVHP------AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS--SVLSKKMISSFHQ 347 + P K + + + +I A+ + S++ S Sbjct: 1271 PHSAAPFVTSLRDKKESSHSRDPPVTHATMATIDAAMEESQEEDDELSMVKWGNSSQISG 1330 Query: 348 DNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLG 407 P + S FL N + + + + + Sbjct: 1331 KGCATDEAPHFLKSDQAETGCRFLTSNVSEGLSSVDAKFQAMVLSSLNPCQFTKAMFNSI 1390 Query: 408 IACAQIHQNYIISQTTDG-----------LVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 Q+ +I L++VDQHAAHER+ E + Sbjct: 1391 KVLGQVDTKFIACLVNSDYDKNPAGESNLLILVDQHAAHERIRLEML------------- 1437 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI------- 509 + I L E L+ + + R+GI+ G +A + +PA +K Sbjct: 1438 -IQALRIGLSPSELRLLEAYSPKMKRIGIEYTLSGDSA-MVTHLPACFVEKEANELKRGR 1495 Query: 510 --------PQLLRDIIDEI-IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 L+++++D I S +L I IL + AC+G+I+ G + E L Sbjct: 1496 QTIATSMAETLIKEVLDSIQHQSGAVSSLPKTITRILNSQACHGAIKFGDTLDRDECKTL 1555 Query: 561 LREMEKNPNSSQCNHGRPTFIKL 583 + ++ QC HGRP + + Sbjct: 1556 IGQLSSCDLPFQCAHGRPALMPI 1578 >gi|301618484|ref|XP_002938646.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Xenopus (Silurana) tropicalis] Length = 1284 Score = 196 bits (497), Expect = 1e-47, Method: Composition-based stats. Identities = 80/361 (22%), Positives = 147/361 (40%), Gaps = 32/361 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L E++ +++ +G I ++EL+ NS+DA S+ + I Q+ DNG G Sbjct: 2 IRCLKEEVQHKLRSGVTISSVGQCVEELVLNSIDALSTCIAVRIDLETV-RIQVVDNGSG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGA 119 + E++ R+ TSK D N+ GFRGEA+ SI VS + + S+ + Sbjct: 61 LCPEDLDRLGMRYFTSKCHSLNDLENLKFHGFRGEAIASIADVSSIVEISSKCKNTSKTF 120 Query: 120 QIAISGEKISSVRPVAM---NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 I K+ SV+ + GT V +LF+ +P R + + VE I + ++ Sbjct: 121 YKLIQNGKLLSVQEANTSRPSAGTTFSVYNLFYNLPVRRKCMD-QTVEFENIRQRVESLS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ + + + + R Q+ G E+ K E + GY Sbjct: 180 LIHPSISFSLK-NDAMHSVVLQLAKTKDVCSRFCQIYGLPRSQKLCEIQHKVREFDMWGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTI--------------RTAYAETIPLGR-- 280 N Y+++N R V + I +T GR Sbjct: 239 IS--CEGHYNKRMQYLYVNNRLVLKTKLHQHIDFLLRKESLICKPKNINVGKTSSPGRSR 296 Query: 281 -----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS 335 Y + ++ + + DV PAK+ I F++ + F+ + ++ + ++ + Sbjct: 297 SCQELYGIFIININCHYSEYDVCFEPAKTLIEFKDWDTVLRFVEEGVKAFLKREKLYVEP 356 Query: 336 V 336 Sbjct: 357 P 357 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 82/220 (37%), Gaps = 27/220 (12%) Query: 391 EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS- 449 E V+ + + Q + LV+VDQHAAHER+ E++ D Sbjct: 983 EMMHSVKVLQQVDNKFIACLMNTKMKEGSEQDGNLLVLVDQHAAHERVRLEQLIADSYES 1042 Query: 450 --------TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE--RFGPNAIAIRE 499 ++ + P +++ E + L+ +G+ + + Sbjct: 1043 APEDDSGRRQLKMSVISPPLELNVTEIQYRLLRVLARSSQSIGLSLSFPDTQGPCVLVSA 1102 Query: 500 IPAILSKKNI-----------PQLLRDIIDEIIDS-----STTYTLQDRIENILATMACY 543 +P ++ L+++ + E ++ T+ + +LA+ AC+ Sbjct: 1103 VPVCFVEREANELHRRRSTVAKNLVQEFLQEQVELLQMTRRAGGTIPLTVLKVLASQACH 1162 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 G+I+ ++ + L++ + + QC HGRP + L Sbjct: 1163 GAIKFNDQLSLDDCKHLMQCLSRCSLPFQCAHGRPAILPL 1202 >gi|270663205|ref|ZP_06222419.1| DNA mismatch repair protein mutL [Haemophilus influenzae HK1212] gi|270316873|gb|EFA28586.1| DNA mismatch repair protein mutL [Haemophilus influenzae HK1212] Length = 137 Score = 196 bits (497), Expect = 1e-47, Method: Composition-based stats. Identities = 59/136 (43%), Positives = 85/136 (62%), Gaps = 3/136 (2%) Query: 30 LIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNI 87 L+ENSLDA +++++ I GG + +I DNG G+ EE+ +A+ RH TSKI+ DD I Sbjct: 1 LVENSLDAGANKIQIDIENGGANLIRIRDNGCGIPKEELSLALARHATSKITDLDDLEAI 60 Query: 88 HTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSV-RPVAMNPGTIVEVRD 146 + GFRGEAL SI +VS LTL SR + Q+ G + + +P + GT VEV + Sbjct: 61 LSLGFRGEALASISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVAN 120 Query: 147 LFFTIPARLNFLKSEQ 162 LFF PAR FL++++ Sbjct: 121 LFFNTPARRKFLRTDK 136 >gi|114614185|ref|XP_001158668.1| PREDICTED: similar to Uroplakin 3B, partial [Pan troglodytes] Length = 349 Score = 195 bits (496), Expect = 2e-47, Method: Composition-based stats. Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 3/162 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 183 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 242 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H T KI + D + + TFGF+GEAL S+ A+S +T+ + G + Sbjct: 243 VEEENFEGLTLKHHTCKIQEFADLTEVETFGFQGEALSSLCALSDVTISTCHASVKVGTR 302 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE 161 + + KI P GT V V+ LF T+P R + Sbjct: 303 LVFDHDGKIIQKTPYPHPRGTTVSVKQLFSTLPVRHKEFQRN 344 >gi|312829691|emb|CBX34533.1| DNA mismatch repair protein mutL. domain protein [Staphylococcus aureus subsp. aureus ECT-R 2] Length = 289 Score = 194 bits (494), Expect = 3e-47, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 4/265 (1%) Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 + S+++ S ++ K + ++ F S + Y + Sbjct: 24 SESLITDDESSGYNNTREKDEDYFKKQQEILQEMDQTFDSNEDASVQNYENKASDDYYDV 83 Query: 393 NDPV---EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 ND + Q+H YII+Q G+ ++DQHAA ER+ +E R Sbjct: 84 NDIKGTKSKDPKRRIPYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGE 143 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 Q LL P + E +I ++ +L ++GI E FG + + P K + Sbjct: 144 VTNEVQDLLIPLTFHFSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEV 203 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 ++++D+I+ I++ ++ E++ M+C SI++ +Q EM+ L+ ++ + + Sbjct: 204 EEIIKDMIELILEEKKVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAED 262 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP I ++EKLF R Sbjct: 263 PFTCPHGRPIIINFSKYELEKLFKR 287 >gi|887629|emb|CAA61428.1| ORF N2317 [Saccharomyces cerevisiae] Length = 256 Score = 194 bits (494), Expect = 3e-47, Method: Composition-based stats. Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 6/220 (2%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 M I ++++ +++I +G++I + A+KEL++NS+DA ++++E + G + +DN Sbjct: 32 MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDN 91 Query: 60 GFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +H TSKI+ D + + T GFRGEAL S+ ++ L++++ Sbjct: 92 GDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKA 151 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMA 176 I+S + N GT V V LF +P R F K+ + + VI+ A Sbjct: 152 DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYA 211 Query: 177 IAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIG 214 I + F+ I K + + N + + IS V G Sbjct: 212 IINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFG 251 >gi|123478110|ref|XP_001322219.1| ATPase [Trichomonas vaginalis G3] gi|84784020|gb|ABC61975.1| MLH2-like protein 1 [Trichomonas vaginalis] gi|121905061|gb|EAY09996.1| ATPase, putative [Trichomonas vaginalis G3] Length = 462 Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats. Identities = 95/452 (21%), Positives = 180/452 (39%), Gaps = 33/452 (7%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 L + IN +++ ++I A+KELIENSLDA + ++ ++ G ++TD+G G+ Sbjct: 2 HHLDQGSINLLSSQQVITSVFDAVKELIENSLDAGAKTIKILMEDIGLRKIEVTDDGSGI 61 Query: 64 TSEEIPMAVQRHCTSKIS--DDFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG-A 119 T H TSKIS +D +N + TFGFRGEA+ SI + +++ +R ++ Sbjct: 62 TPNGRDDVALPHTTSKISTIEDLNNELSTFGFRGEAIHSICCLGDVSITTRCKGEDSALT 121 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + I S + N GT V V++L +P R+ + + ++ ++ R ++ Sbjct: 122 MVFNHDGTIKSRKKSTANVGTTVCVQNLLDGLPVRIRDER-AKFNPEILKGLLSRYYLSA 180 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG- 238 P+V F + N + +S G + + N ++ ++ Sbjct: 181 PQVRFIVDCPPHFTVT---RPPLTNLQQAVSLEFGVNVSSQLSSRNSETFIGDVRVKLQA 237 Query: 239 ---------IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP--LGRYPVVVLL 287 N+ + + +NGR V+ + I + + R+P V+ Sbjct: 238 LVPDQKSDWKTVSTNRNSARQILIVNGRPVRSAAVEKVINENFWKVFGTIPKRFPRFVIC 297 Query: 288 LE------IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM 341 L+ I +DVN AK I F I FI +S+ N + + + Sbjct: 298 LDFFRDQNITSSLIDVNRDAAKYGIAFSEEQSILKFIEKSLSLDTNHEKEVSQKTSTISK 357 Query: 342 ISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA 401 S +P L +T + + ++ S ++ S+ + ++E Sbjct: 358 WPS----KSPSISLEDESTQYNIEKFGTYKWKHINSFDEFPLFFVEGQSDKHILAVKTEG 413 Query: 402 THYQLGI---ACAQIHQNYIISQTTDGLVIVD 430 Q G+ A+I +I D ++ D Sbjct: 414 LFEQCGVATPEIARIPPEELIVMYWDKIIEFD 445 >gi|332025002|gb|EGI65189.1| 60S ribosomal protein L5 [Acromyrmex echinatior] Length = 995 Score = 194 bits (493), Expect = 4e-47, Method: Composition-based stats. Identities = 83/412 (20%), Positives = 165/412 (40%), Gaps = 52/412 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVI-------------- 46 M I L K + I +II +KELIEN++DA++ +E + Sbjct: 1 MPILALDVKTVKLITTTQIITSVYAVVKELIENAIDADADNIEINLVRQPIYYNIVYLYI 60 Query: 47 -------------------AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFS 85 G S ++ DNG+G++ ++ P TSKI+ +D Sbjct: 61 CIMFFKEMYYIHVLLCTFQVDNGTSLIEVKDNGYGISKKDAPYMALPSYTSKIANFEDLD 120 Query: 86 NIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEV 144 + TFGFRGEAL ++ AV+ +T++++ ++N G ++ + ++ + GT V+V Sbjct: 121 ALRTFGFRGEALSAVCAVAEVTIITKTEEDNVGTSYVMNNDGQVVNCESCHRTIGTTVQV 180 Query: 145 RDLFFTIPARLNFLKSEQVETNLIT---DVIRRMAIAYPKVSFTFSTIKSNRYKMNFQST 201 R+LF +P R + + + I +++ I P V F + + + + Sbjct: 181 RNLFKQVPVRRQIITNTKKANQTIKLLETLMQCFGICKPNVRIQFRVNNNITFT---KPS 237 Query: 202 NGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNR----GNANQFYVFINGR 257 N E ++ ++G ++N + K E TLQ + + Y+ +N R Sbjct: 238 LNNIREAVNHILGRKIMSNMEWIESKDAEFTLQLMLPSKKIQDLSEISHPDLHYILVNNR 297 Query: 258 TVQDKFILST-IRTAYAETIPLGRYPVVVLL-LEIDPRQVDVNVHPAKSYIRFRNPTIIR 315 V+ K + + A + I L EI + V ++ I Sbjct: 298 PVKHKALEKNKVLNAVDKYIRK----FYGLKATEIAEQNVSLDTSVCYEDYASNPNENIA 353 Query: 316 NFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQE 367 + + +K ++ + +++ +K I + + + + + T+ QE Sbjct: 354 DTEWPACKKRKIQERVIQENIVKEKSILNNSNECKKSSQNEQQNDNQTHNQE 405 >gi|51094587|gb|EAL23839.1| similar to PMS4 [Homo sapiens] Length = 263 Score = 194 bits (493), Expect = 4e-47, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 11/192 (5%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++ NG G Sbjct: 30 IKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 89 Query: 63 MTSEEIP--------MAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRP 112 + E ++ +H TSKI + D + TFGFRGEAL S+ A+S +T+ + Sbjct: 90 VEEENFEGLILTLYSLSALKHHTSKIQEFADLPQVETFGFRGEALSSLCALSDVTISTCH 149 Query: 113 PQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 G ++ KI P G V V+ LF T+P + + Sbjct: 150 VSAKVGTRLVFDHYGKIIQKTPYPHPRGMTVSVKQLFSTLPVHHKEFQRNIKKKRACFPF 209 Query: 172 IRRMAIAYPKVS 183 +P+ S Sbjct: 210 AFCRDCQFPEAS 221 >gi|312438322|gb|ADQ77393.1| DNA mismatch repair protein HexB family protein [Staphylococcus aureus subsp. aureus TCH60] Length = 289 Score = 194 bits (492), Expect = 4e-47, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 115/265 (43%), Gaps = 4/265 (1%) Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 + S+++ S ++ K + ++ F + S + Y + Sbjct: 24 SESLIADDESSGYNNTREKDEDYFKKQQEILQEMDQTFDSNDDTSVQNYENKASDDYYDV 83 Query: 393 NDPV---EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 ND + Q+H YII+Q G+ ++DQHAA ER+ +E R Sbjct: 84 NDIKGTKSKDPKRRIPYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGE 143 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 Q LL P + E +I ++ +L ++GI E FG + + P K + Sbjct: 144 VTNEIQDLLIPLTFHFSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEV 203 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPN 569 ++++D+I+ I++ ++ E++ M+C SI++ +Q EM+ L+ ++ + + Sbjct: 204 EEIIKDMIELILEEKKVD-IKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAED 262 Query: 570 SSQCNHGRPTFIKLKLSDIEKLFGR 594 C HGRP I ++EKLF R Sbjct: 263 PFTCPHGRPIIINFSKYELEKLFKR 287 >gi|327350690|gb|EGE79547.1| DNA mismatch repair protein [Ajellomyces dermatitidis ATCC 18188] Length = 923 Score = 194 bits (492), Expect = 4e-47, Method: Composition-based stats. Identities = 95/557 (17%), Positives = 177/557 (31%), Gaps = 69/557 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + + I P +KELI+NSLDA ++ + ++ + DNG Sbjct: 1 MSIAHLPPDTARAVRSTSAISDPCSLVKELIDNSLDAGATYISVEVSANTLDTIHVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGA-VSHLTLMSRPPQN 115 G+ + + +R CTSK+ DD NI T GFRGEAL S + + ++ Sbjct: 61 VGIHPNDRHLVCKRSCTSKLQTIDDLKNIGGSTLGFRGEALASAAEMCGSIAITTKVAGE 120 Query: 116 NTG-AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 G + S A GT V + + +P R KS N + V+ Sbjct: 121 MVGETLKYDRTGLLVSCTKAAHPTGTAVRISEFLKLVPVRKKIALKSAPKTLNQMKKVLN 180 Query: 174 RMAIAYPKV--SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 ++ P++ SF KS+ + + N + +V+G + I+ + + Sbjct: 181 AYVLSRPEIRLSFKILKTKSDSSWVYASTENATVSTAMLRVVGAEAISQCTTITWPQIQG 240 Query: 231 -------------------ITLQGYTGIP--TFNRGNANQFYVFINGRTVQ-DKFILSTI 268 I + P ++ N YV I+GR + + + Sbjct: 241 GDDDFLLESLDINESNPSAIRIVATIPKPGSDLSKINHAGQYVSIDGRPMSISNGVGKEL 300 Query: 269 RTAYAETIPLGRY----------PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIR--- 315 + + G + P + + L P DVNV P+K+ + F + ++ Sbjct: 301 VKLFKSYLRSGSHCVGSQTSLVNPFLFMHLHCQPGSYDVNVEPSKNDVVFEDSKLVMSTA 360 Query: 316 -NFIIQSIQKAINKKGISTSSVLSKKMISS-----------------FHQDNAPKTHLPK 357 N + +K + L + +S +D H+P Sbjct: 361 ENMFKTVYGEIESKHTHQNNRQLEDQGLSPQVIRSPRSRSASSRRTHEAEDQPLFLHIPS 420 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI---H 414 +A ++ + + +++ + + E + + + Sbjct: 421 HAVKHCHSIGNALVSSTQGKKDNVSVASSADTTSCPQLAENNPTLSDSSRLTNPWMLAKR 480 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Q + + H E R D + L +L Sbjct: 481 QYVTPPKKNAQSRNFNSHLLTPAYEDESFRSDSTMVDNCTTNSLPASPANLTPIPMQTPE 540 Query: 475 EHDEDLHRLGIKAERFG 491 L + G G Sbjct: 541 TR---LAKAGHNISPTG 554 >gi|284024290|ref|ZP_06378688.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus 132] gi|304381138|ref|ZP_07363791.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304340121|gb|EFM06062.1| DNA mismatch repair protein HexB [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|329727860|gb|EGG64311.1| putative DNA mismatch repair protein [Staphylococcus aureus subsp. aureus 21189] Length = 289 Score = 194 bits (492), Expect = 5e-47, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 1/219 (0%) Query: 376 LSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 + + D ++ + Q+H YII+Q G+ ++DQHAA Sbjct: 70 QNYENKASDDYYDVNDIKGTKSKDPKRRIPYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQ 129 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 ER+ +E R Q LL P + E +I ++ +L ++GI E FG + Sbjct: 130 ERIKYEYFRDKIGEVTNEVQDLLIPLTFHFSKDEQLVIDQYKNELQQVGIMLEHFGGHDY 189 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 + P K + ++++D+I+ I++ ++ E++ M+C SI++ +Q Sbjct: 190 IVSSYPVWFPKDEVEEIIKDMIELILEEKKVD-IKKLREDVAIMMSCKKSIKANHYLQKH 248 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 EM+ L+ ++ + + C HGRP I ++EKLF R Sbjct: 249 EMSDLIDQLREAEDPFTCPHGRPIIINFSKYELEKLFKR 287 >gi|13569567|gb|AAK31150.1|AF346621_1 DNA mismatch repair protein MutL [Aphanizomenon flos-aquae TR183] Length = 406 Score = 193 bits (491), Expect = 6e-47, Method: Composition-based stats. Identities = 103/457 (22%), Positives = 187/457 (40%), Gaps = 58/457 (12%) Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 GA + ++S V VA+ PGT+V V +LF AR L + + + +VI+++A Sbjct: 3 HGAVAYNNEGEVSQVEVVAIAPGTVVTVNNLFANYEARRQGLPATNQQLKAVQNVIQQIA 62 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P V++ + + T G +I + + ++ +L Sbjct: 63 LCHPHVNYQIWQNDKEWFTICPAPTVGKLIPQILPQVRQGDLHEVNLQIPNLENSSLHLV 122 Query: 237 TGIP-TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 G+P +R + V INGR ++ + TI +A+ + +P RYPV L L I P Q+ Sbjct: 123 IGLPDRCHRHRPDWVKVAINGRMIKTPELEQTIFSAFHKILPRDRYPVCFLHLTISPEQI 182 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 + N +PAK+ I T + I ++I K++ + + +S+ + K Sbjct: 183 NWNRNPAKTEIYLNELTFWQEQITEAIHKSLRISETNIKESIHTTRVSNLLKVAESKGEY 242 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 Q+++ S N A AQ+ Sbjct: 243 ------------NFNSQKSQSSENQT------------------------YLKAIAQLSN 266 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 YI+++ + G+ +V+QH AHER+++E++ + + + ++ L Sbjct: 267 TYIVAEHSGGMWLVEQHIAHERVLYEQLCDSWQLVAVETPIII-----------YQLSQA 315 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 L +G+ E FG N A+R IP +L ++ D + I++ S LQ Sbjct: 316 QVSQLQCIGLDIEPFGDNLWAVRNIPMMLKQRE------DCAEAILELSWGGDLQTAQVA 369 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + AC +IR+G KM EM LL ++ N Sbjct: 370 V----ACRSAIRNGTKMSLPEMQTLLDNWQRTRNPHH 402 >gi|85000941|ref|XP_955189.1| DNA mismatch repair protein [Theileria annulata strain Ankara] gi|65303335|emb|CAI75713.1| DNA mismatch repair protein, putative [Theileria annulata] Length = 847 Score = 193 bits (491), Expect = 6e-47, Method: Composition-based stats. Identities = 88/343 (25%), Positives = 155/343 (45%), Gaps = 34/343 (9%) Query: 1 MKIRKLSEKIINQI-AAGEIIERPSIAIKELIENSLDAESSR----------VETVIAGG 49 M ++ L + + I + ++I S I+EL+EN++DA S+ +E + Sbjct: 1 MSLQSLDHQ-HSCISRSFQVINGISCVIRELVENAIDAHSTNIGFFIIFIQFLEIKLYNA 59 Query: 50 GKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFS-NIHTFGFRGEALPSIGAVSHL 106 G ++TDNG G++ +H TSKI +D ++ TFGFRGEAL S+ +S++ Sbjct: 60 GVDLIKVTDNGTGISEINFDNLGSKHSTSKIRKFEDLFTSLTTFGFRGEALYSMCNLSNV 119 Query: 107 TLMSRPPQNNTGAQIAISG-EKISSVRPVAMNPGTIVEVRDLFFTIPARLN-FLKSEQVE 164 + +R P ++ G + I + P+A N GT V+VR+LF P R +K+ + + Sbjct: 120 EIETRTPNSDNGWLLKFDSLGNIINKSPIASNIGTCVKVRELFGEYPVRRKLLVKNSKSQ 179 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL 224 + I++ A+ P +SF F+T+ +N+ N +T+G+ + I V+ E F Sbjct: 180 ISKSVSQIQQYALINPHISFNFTTVTNNKKFSNIFATSGS-KDEIRGVVEEIF------- 231 Query: 225 NEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVV 284 +G P RG Y +IN R + +A P Sbjct: 232 ---------EGLVSNPYNERGYREMEYFYINKRPITKVQKFKNAISAIFSHFSSRAKPSF 282 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 +L L ++ VDVN+ P K + I +++ + + Sbjct: 283 ILNLTMNCDNVDVNISPDKRSAYIYSEDYIIRTFKENLYEILK 325 Score = 97.4 bits (241), Expect = 6e-18, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 55/175 (31%), Gaps = 38/175 (21%) Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA--------------- 487 +R N ++I + + L G Sbjct: 659 LRGLINMSEINRIDTIFNTSKFFKINNVQVAENSMNVLLSNGFDIKVCREKEFLVFNDGD 718 Query: 488 --------ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY------------ 527 E+ G + + +P IL K D ++E+ Sbjct: 719 VCMSSVLTEKIGRG-VYVNTLPQILGKVLGEDDFIDFLNELSTIDYIENNQQSDYIWGLG 777 Query: 528 --TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 +I +ILA+ AC S+R+G + + +M ++++M + C HGRP+ Sbjct: 778 NIPRPHKIWSILASKACKSSVRAGDGLTNGQMKNIIKKMGTLIHPWNCPHGRPSI 832 >gi|225419751|ref|ZP_03762054.1| hypothetical protein CLOSTASPAR_06089 [Clostridium asparagiforme DSM 15981] gi|225041618|gb|EEG51864.1| hypothetical protein CLOSTASPAR_06089 [Clostridium asparagiforme DSM 15981] Length = 413 Score = 193 bits (491), Expect = 6e-47, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 1/260 (0%) Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 S + + + +T P + ++Q++ Q S + + D Sbjct: 153 SDAADRPAGVTAESREIETVNPPAVSDSADSQQERVPQAVSQSVETSGSAPNTPEQLDLF 212 Query: 395 PVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITS 454 + + Q+ Y + + LVI+DQHAAHE++++E + + + + Sbjct: 213 DTKFLDPKSRLRHKLIGQLFDTYWLVEYDGMLVIIDQHAAHEKILYENTMKSLKTRQYDT 272 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q + P I+ L E L+ ++ + LG + E FG A+R +PA L +LL Sbjct: 273 QMVNPPIILTLSMNEELLLKKYMDYFTNLGFEIENFGGREYAVRGVPANLFSIAKRELLI 332 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 ++ID + D + D I +A+M+C +++ M ++E N L+ ++ N C Sbjct: 333 EMIDGLSDDAAVRN-PDIIYEKVASMSCKAAVKGHMSMSAMEANELIDQLLHLDNPYNCP 391 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRP I + ++EK F R Sbjct: 392 HGRPVIISMTKYELEKKFKR 411 >gi|322708667|gb|EFZ00244.1| DNA mismatch repair protein, putative [Metarhizium anisopliae ARSEF 23] Length = 899 Score = 193 bits (490), Expect = 7e-47, Method: Composition-based stats. Identities = 89/524 (16%), Positives = 178/524 (33%), Gaps = 53/524 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L + + + + I P +KEL++N+LD++++ VE + + DNG Sbjct: 1 MSIRPLPQSTVRLLGSSMNITTPYDLVKELLDNALDSQATAVEIAASSNTIDRISVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNI--HTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+ + +R TSK+ + + + T GFRGEAL S ++++++++++ P + Sbjct: 61 SGIDISDFGALGRRAHTSKLREYSELVEVGGTTLGFRGEALASANSIANVSIITKSPGDP 120 Query: 117 TGAQIAISGEK--ISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 +I + + RPV+ GT V V LF +P R + K + + I ++R Sbjct: 121 VAWRIELIPGTGGVKDRRPVSSTVGTTVAVTRLFENLPPRKQYALKQAKNCISQIQQLLR 180 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNF-PERISQVIGEDFINNAVELNEKSNE-- 230 + A P V + I + + + E I Q++G + + N +E+ E+ + Sbjct: 181 QYVFARPNVKMSLKIIGDTKPLWAYSPKPPDLKREAILQILGANGMVNCIEVYEEVHFNR 240 Query: 231 -------------ITLQGYTGIPTF---NRGNANQFYVFINGRTVQDKFILSTIRTAYAE 274 GY P + N + + + Sbjct: 241 ESISQMETQEPARWVFSGYIQKPYIISKDFKVRGAHLSIDNRPMSAGWHVTKKMTSILKS 300 Query: 275 TIPLGRYP---------VVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKA 325 I P + + + PR D N+ K + + + ++A Sbjct: 301 HISQTTAPKSAERQCGVFLQINIRCPPRSYDPNITMRKDELLIFEEKGLLDGFELVCKRA 360 Query: 326 INKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 K +Q A +T N +E L + + Sbjct: 361 YEKH----------------NQALAATHPPATASTQPNNARECERQLATELEDEGVSCAS 404 Query: 386 DPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQ 445 S +D ++ ++A +I + T + D + E + + Sbjct: 405 TDKVSGQHDNLDNTQALQNTSRATRPKIQTTMKTTFTVNMGRKEDSDSDEE--NMDMAIE 462 Query: 446 DFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 S + + I + + L + G K Sbjct: 463 VEIPAGPPSVRDSHTNNQEQHPRQTKTIRHYFQSLPKDGFKISH 506 >gi|261205958|ref|XP_002627716.1| DNA mismatch repair protein [Ajellomyces dermatitidis SLH14081] gi|239592775|gb|EEQ75356.1| DNA mismatch repair protein [Ajellomyces dermatitidis SLH14081] Length = 923 Score = 192 bits (489), Expect = 1e-46, Method: Composition-based stats. Identities = 93/557 (16%), Positives = 178/557 (31%), Gaps = 69/557 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + + I P +KELI+NSLDA ++ + ++ + DNG Sbjct: 1 MSIAHLPPDTARAVRSTSAISDPCSLVKELIDNSLDAGATYISVEVSANTLDTIHVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGA-VSHLTLMSRPPQN 115 G+ + + +R CTSK+ DD NI T GFRGEAL S + + ++ Sbjct: 61 VGIHPNDRHLVCKRSCTSKLQTIDDLKNIGGSTLGFRGEALASAAEMCGSIAITTKVAGE 120 Query: 116 NTG-AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 G + S A GT V + + +P R KS N + V+ Sbjct: 121 MVGETLKYDRTGLLVSCTKAAHPTGTAVRISEFLKLVPVRKQIALKSAPKTLNQMKKVLN 180 Query: 174 RMAIAYPKV--SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE- 230 ++ P++ SF KS+ + + N + +V+G + + + + Sbjct: 181 AYVLSRPEIRLSFKILKTKSDSSWVYASTENATVSTAMLRVVGAEATSQCTTITWPQIQG 240 Query: 231 -------------------ITLQGYTGIP--TFNRGNANQFYVFINGRTVQ-DKFILSTI 268 I + P ++ N YV I+GR + + + Sbjct: 241 GDDDFLPESLDINESNPSAIRIVATIPKPGSDLSKINHAGQYVSIDGRPMSISNGVGKEL 300 Query: 269 RTAYAETIPLGRY----------PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTI----- 313 + + G + P + + L P DVNV P+K+ + F + + Sbjct: 301 VKLFKSYLRSGSHCVGSQTSLVNPFLFMHLHCQPGSYDVNVEPSKNDVVFEDSKLAMSTA 360 Query: 314 ------IRNFI----IQSIQKAINKKGISTSSV------LSKKMISSFHQDNAPKTHLPK 357 + I + + +G+S + + + +D H+P Sbjct: 361 ENLFKTVYGEIESKHTHQNNRQLEDQGLSPQVIRSPRSRSASSRRTHEAKDPPLFLHIPS 420 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI---H 414 +A ++ + + +++ + + E + + + Sbjct: 421 HAVKHCHSIGNALVSSTQGKKDNVSVASSADTTSCPQLAENNPTLSDSSRLTNPWMLAKR 480 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 Q + + H E R D + + L +L Sbjct: 481 QYVTPPKKNAQSRNFNSHLLTPAYEDESFRSDSTMVENCTTNSLPASPANLTPIPMQTPE 540 Query: 475 EHDEDLHRLGIKAERFG 491 L + G G Sbjct: 541 TR---LAKAGHNISPTG 554 >gi|226479068|emb|CAX73029.1| PMS1 protein homolog 2 [Schistosoma japonicum] Length = 302 Score = 192 bits (489), Expect = 1e-46, Method: Composition-based stats. Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 20/233 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSR------------VETVIAGGG 50 I +L + ++++I +G+++ + A+KEL+ENS+DA+S++ +E + G G Sbjct: 11 ISRLDKNLVHKICSGQVVVTLASAVKELLENSIDAKSTKIGFPTFLVDVLIIEIRLRGHG 70 Query: 51 KSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTL 108 ++ DNG G+ E+ ++CTSK++ DD S + T+GFRGEAL S+ ++ +T+ Sbjct: 71 SESIEVIDNGVGIGEEDFESLTGKYCTSKLNTFDDLSCVETYGFRGEALSSLCHLAKVTI 130 Query: 109 MSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF---LKSEQVE 164 + G ++ +I++ R +A + GT V V LF+ +P R E Sbjct: 131 HTCAFDAKIGTKLEFDSSGRITNRRSLARSQGTTVCVNQLFYDLPVRRRHLTDPNRLSKE 190 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGE 215 + ++ + V + S + +N S + + I+ V G Sbjct: 191 FAKVISLLTAYCLVCVGVQISCSRVGKKGELINVISNGPSISLKDNIAAVFGH 243 >gi|269861340|ref|XP_002650381.1| DNA mismatch repair enzyme (predicted ATPase) [Enterocytozoon bieneusi H348] gi|220066184|gb|EED43679.1| DNA mismatch repair enzyme (predicted ATPase) [Enterocytozoon bieneusi H348] Length = 536 Score = 192 bits (489), Expect = 1e-46, Method: Composition-based stats. Identities = 86/372 (23%), Positives = 157/372 (42%), Gaps = 39/372 (10%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I KL +KII +IAAGE+I S +KEL+EN++DA+++ + + + I+D G G Sbjct: 5 ITKLPDKIIKKIAAGEVITCLSNIVKELLENAIDAKATSIIIQLEKAQLT---ISDTGSG 61 Query: 63 MTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + + + HCTSK+S+ +F +I T+GFRGEAL SI S + + ++ ++ G + Sbjct: 62 ILESDFDLLCEPHCTSKLSNHNFIDIQTYGFRGEALYSISMCSDIYIETKTQNDDLGWGL 121 Query: 122 AISGEKISSVRP-VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 S K+ GT+V ++++F + L + ++ + IR Y Sbjct: 122 MYSNGKLQKKTRIAVAKVGTMVNIQNIFKNNFIKKYELTNSNMQYKNTIETIRAYQTVYY 181 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + I + F N+ + + Sbjct: 182 NK------------------IQIILNDDIIDYQSDPFKKYYSLGGTYINDNNYKIFIS-- 221 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 N F +FINGR V+D + + + + +E+ ++D+N+H Sbjct: 222 --EDIKKNTFILFINGRLVRDNILKKHVFKIIENKM---------IFIELQNVEIDINIH 270 Query: 301 PAKSYIRFRNPTIIRNFIIQ---SIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 P+K+ + N I I+ Q I + I T+ +K+ I+S + N + + Sbjct: 271 PSKAEVMLNNKEAIIEKILHLLRQYQHNITQSKIITTVNNNKENITSLDKSNPTRVYNKI 330 Query: 358 YATSLTNTQEKL 369 Y T E + Sbjct: 331 YTEPAVRTLEDI 342 >gi|67522214|ref|XP_659168.1| hypothetical protein AN1564.2 [Aspergillus nidulans FGSC A4] gi|40745115|gb|EAA64271.1| hypothetical protein AN1564.2 [Aspergillus nidulans FGSC A4] gi|259486892|tpe|CBF85120.1| TPA: DNA mismatch repair protein, putative (AFU_orthologue; AFUA_8G05820) [Aspergillus nidulans FGSC A4] Length = 867 Score = 192 bits (488), Expect = 1e-46, Method: Composition-based stats. Identities = 83/412 (20%), Positives = 154/412 (37%), Gaps = 34/412 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + I + II P KEL++N+LDA ++ V I+ Q+ DNG Sbjct: 1 MPIVALPPATVRAIGSTSIISDPYSLAKELLDNALDAFATLVSVEISQDTVGLLQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVSH-LTLMSRPPQN 115 G+ +++ + +R TSKI +D + + GFRGEAL S +S L + +R + Sbjct: 61 HGIPADDYMVVCKRTFTSKIHTVEDLQKVGGKSLGFRGEALASAAELSGALNISTRVETD 120 Query: 116 NTGAQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIR 173 G+ +++ ++ GT V + +LF IP R +K+ + I +++ Sbjct: 121 PVGSSLEYGRNGELTRTERISHPVGTTVRILNLFQQIPVRRQTAIKNSKKTLLKIKKMVQ 180 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQST---NGNFPERISQVIGEDFINNAVELNE---- 226 A+A P + +F +K+ +N+ NG E +V G N + N Sbjct: 181 AYAMARPSIRLSFKVLKAKNESLNWMYAPGENGTLTEAALRVGGTGIAPNCILKNWPTPS 240 Query: 227 -----KSNEITLQGYTGIP----TFNRGNANQFYVFINGRTVQD-KFILSTIRTAYAETI 276 ++ + +P + N Y+ ++ R + + I + + Sbjct: 241 KDGNASPEDLGFRLVALLPKVGSDITKFNNLGQYISVDNRPLSSGRGFAQDITKLFRRYL 300 Query: 277 ----------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 P P + + + D N+ P+K + F N + + + ++ Sbjct: 301 RSAASRDGLSPPINDPFLCVHVLCLGGAYDANIEPSKDDVLFENQQAVLSLVEDLLRDTY 360 Query: 327 NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 S Q N + L K S + L S+ Sbjct: 361 GDLSNVHEDHGSTGQGRGTSQRNGFEALLSKKQQSAALSTPALDSSPQERSS 412 >gi|1304120|dbj|BAA07510.1| PMS5 [Homo sapiens] gi|1407578|dbj|BAA07472.1| hPMS5 [Homo sapiens] Length = 186 Score = 192 bits (487), Expect = 2e-46, Method: Composition-based stats. Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 6/165 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 9 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 68 Query: 63 MTSEEIP---MAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 + E ++ +H T KI + D + + TFGF+GEAL S+ A+S +T+ + Sbjct: 69 VEEENFEGLTLSALKHHTCKIQEFADLTEVETFGFQGEALSSLCALSDVTISTCHASVKV 128 Query: 118 GAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE 161 G ++ + KI P T V V+ LF T+P R + Sbjct: 129 GTRLVFDHDGKIIQETPYPPPQRTTVSVKQLFSTLPVRHKEFQRN 173 >gi|258545149|ref|ZP_05705383.1| DNA mismatch repair protein MutL [Cardiobacterium hominis ATCC 15826] gi|258519574|gb|EEV88433.1| DNA mismatch repair protein MutL [Cardiobacterium hominis ATCC 15826] Length = 311 Score = 192 bits (487), Expect = 2e-46, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 129/278 (46%), Gaps = 15/278 (5%) Query: 318 IIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLS 377 + S + + ++ + Q+ AP P +TS Sbjct: 46 LRYSGDYRLERPTTPRRALAESAAYYQWAQNIAPSPVHPGGSTSTNPIPSPSPTGRGEQD 105 Query: 378 TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 +DD T + LG A QIH +I++Q GLVIVD HAAHER Sbjct: 106 YAAAPVNDDQT--------------EHPLGYALGQIHNIFILAQNARGLVIVDMHAAHER 151 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA-IA 496 +++E+++ + Q LL P+ + + +H + LHRLG E + I Sbjct: 152 ILYERLKAQLRARHPEVQRLLLPQSLAATPAHLDTLAQHRDWLHRLGFDLEASADESRIH 211 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIE 556 I +P++L + +++ D++ E+ + + ++ + IL+ ++C+ ++R+ + E Sbjct: 212 INAVPSLLKHAAVAEIVGDLLHELGEYPASIAIERLQDEILSRLSCHKAVRAHDSLTIPE 271 Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 MN LLR++E P S QCNHGRPT+++L ++ K F R Sbjct: 272 MNHLLRDIETTPASGQCNHGRPTWVQLTTDELGKYFMR 309 >gi|294654739|ref|XP_002770025.1| DEHA2A10868p [Debaryomyces hansenii CBS767] gi|199429111|emb|CAR65402.1| DEHA2A10868p [Debaryomyces hansenii] Length = 959 Score = 191 bits (486), Expect = 2e-46, Method: Composition-based stats. Identities = 102/431 (23%), Positives = 192/431 (44%), Gaps = 38/431 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ ++ I +I +G++I +KEL+ENS+DA SS++E + G +I D+G Sbjct: 1 MAIQNINAGDIQRITSGQVIIDLVSIVKELVENSIDASSSKIEVLFKNSGLDSIEIIDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-NT 117 G+ ++ +HCTSK+S + S ++T GFRGEAL S+ +VS+L + + +N Sbjct: 61 IGIGEDDFTSVCLKHCTSKLSTFEQLSEVNTLGFRGEALSSLCSVSNLRITTCTKENYPR 120 Query: 118 GAQIAISGEK--ISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRR 174 ++ + I+ + + GT + V LF +P R N K+ + E N ++ Sbjct: 121 ATELKYNAMGVLINKKKVIGGIKGTSILVSSLFHNLPVRQKNLQKNLKREYNKAVSLLIN 180 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQ-----STNGNFPERISQVIGEDFINNAVELN---- 225 I P + FT I K N + + + + + G + + ++ Sbjct: 181 YIIINPNIRFTVYNINPKTSKKNLIIGTKGTGSSTILDNVVNIFGSNGAYGLIPIDLSVD 240 Query: 226 ---------------EKSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTI 268 K + +GY +F G + ++ Y+FINGR + K L TI Sbjct: 241 DIDVKFRLNRGDFPTHKKLNVQFKGYISNSSFGLGRSSGDRQYLFINGRPIIFKKFLKTI 300 Query: 269 RTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + ++PVV+L + ID +D+NV P K I +N +I + + + K + Sbjct: 301 NEVYKSFNHV-QFPVVILNVIIDTEFLDINVTPDKRVIMIQNEDLINDILRNEVTKFFDT 359 Query: 329 KGIS-----TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLP 383 + +S + SS ++ + + +++ T + +Q+N + T Sbjct: 360 QNTVIPKNKSSGISLSDEKSSVSSNSTQANKVTEVVSNVNETSREAEVQKNLMVTRKREH 419 Query: 384 SDDPTYSEDND 394 +++ T E + Sbjct: 420 NENETDEEAGE 430 Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 16/238 (6%) Query: 367 EKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTT--D 424 E + S N + + + T + + + Q + +I+ + Sbjct: 722 EASGKSQEDSSRNIAIDNIESTKEAEEKLSYTISKSDFLEMRLIGQFNLGFILVTLNSSN 781 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 L I+DQHA+ E+ FEK+ + +QTL+ P+ I+L + ++M++ + G Sbjct: 782 NLFIIDQHASDEKYNFEKLTEITT---FQNQTLVIPKTIELNAIDEMIVMDNLSVFKQNG 838 Query: 485 IKAERFGPN----AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT---LQDRIENIL 537 + N I + +P + ++I I ++T +I ++L Sbjct: 839 FVIQVEEDNPPGKRIKLISLPVSKNVLFDISDFHELIHLINTHNSTSNEGIKCSKIRSLL 898 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL--FG 593 A AC SI G+ + M ++L + K C HGRPT L +++K F Sbjct: 899 AMRACRSSIMIGQHLNRKTMTKILTNLSKLDKPWNCPHGRPTMRHLT--ELQKWSSFK 954 >gi|326469732|gb|EGD93741.1| DNA mismatch repair protein [Trichophyton tonsurans CBS 112818] Length = 1038 Score = 191 bits (486), Expect = 2e-46, Method: Composition-based stats. Identities = 88/427 (20%), Positives = 153/427 (35%), Gaps = 49/427 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I G ++ DNG Sbjct: 3 TIKPIEARSVHQIQSGQVIVDLY-------------------VRFKNNGLDLIEVQDNGH 43 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ +H TSK+S D +++ TFGFRGEAL S+ AVS+LT+++ Q A Sbjct: 44 GISPNNYESLALKHYTSKLSTFADLTSLQTFGFRGEALSSLCAVSNLTVVTAEAQQAPRA 103 Query: 120 Q--IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 K+ S + VA GT V + +LF +P R K+ + E + ++ A Sbjct: 104 SKLDFEFSGKLKSTQIVAGQKGTTVSIENLFKPLPVRRRELEKNVKREYGKVIALLHAYA 163 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVE----------- 223 V F + +T N E IS V G + + Sbjct: 164 CISTGVRFNVKNQMPKGKSVVVFTTKSNPTTRENISNVYGAKTLLALMPLDLDLEYEPST 223 Query: 224 -----LNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 ++ SN+I + G+ P F R ++ F+N R I Y Sbjct: 224 AAKRFSSQASNKIFVHGHISKPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYKSF- 282 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 L + P + E+D DVNV P K I + + + + ++ + + Sbjct: 283 NLSQSPFIFANFEMDTSAYDVNVSPDKRTILLHDAGALIESL----KASLTELFENEDQT 338 Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 + ++ Q S+ Q+K + L DD D +P Sbjct: 339 VPVSQLTFSKQSQLTPKRGQTPPASVDAAQDKPEKPPGNADYSQELGHDDTVERNDREPT 398 Query: 397 EESEATH 403 + ++ Sbjct: 399 QTPQSPM 405 Score = 123 bits (308), Expect = 9e-26, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 78/206 (37%), Gaps = 45/206 (21%) Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 Q D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I+++ Sbjct: 795 AEQEQDELFIIDQHASDEKYNFERLQ---AETTVQNQRLVKPKTLDLTAVEEEVIIDNLA 851 Query: 479 DLHRLGIKAE-------RFGPNAIAIREIP----AILSKKNIPQLL-------------- 513 L + G E G I +P + +++ +L+ Sbjct: 852 ALEKNGFIVEIDTSGDEPIGRRCKLI-SLPLSKEVVFDTRDLEELIVLLSEAPQQSQNNL 910 Query: 514 ----RDIIDEIIDSSTTY------------TLQDRIENILATMACYGSIRSGRKMQSIEM 557 R+ ++ + ++ + A AC SI G+ + +M Sbjct: 911 GKRAREELESDAEYIEPSGVASTPFSDYLVPRPSKVRKMFAMRACRSSIMIGKNLTHRQM 970 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKL 583 +++ M C HGRPT L Sbjct: 971 ETVVKHMGTIDKPWNCPHGRPTMRHL 996 >gi|255076207|ref|XP_002501778.1| predicted protein [Micromonas sp. RCC299] gi|226517042|gb|ACO63036.1| predicted protein [Micromonas sp. RCC299] Length = 781 Score = 191 bits (485), Expect = 3e-46, Method: Composition-based stats. Identities = 77/361 (21%), Positives = 141/361 (39%), Gaps = 39/361 (10%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R+L + ++ + I+ ++EL+ NS+DA + V VI G ++D+G GM Sbjct: 49 RQLPPDLERKLRSSTIVTSVGQLVEELVCNSIDAGAHDVSVVIDTGSTLSVTVSDDGCGM 108 Query: 64 TSEEIPM-AVQRHCTSKISD--DFS-NIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 + +++ + A RH TSKI D ++ T GFRGEAL SI L + +R + Sbjct: 109 SVKDVKLVATNRHHTSKIHSISDLGGSLRTLGFRGEALASIAEFCVLQVTTRAAGSFETF 168 Query: 120 QIAISGE--------------------------KISSVRPVAMNPGTIVEVRDLFFTIPA 153 S R GTIV +DLF+T P Sbjct: 169 SKICSKVGGLTLFVRTSHHVQNLTSRSPQGQTLSCGPARNQLTKAGTIVACKDLFYTHPV 228 Query: 154 RLN-FLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQV 212 R ++ + + R+A+ +P+V F + + + +S Sbjct: 229 RRGVIRRNIAKQLEDTRVRLYRLALIHPEVGFLLKDVGARHDVLRALPGRS-LLSILSDA 287 Query: 213 IGEDFINNAVELNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRT 270 G+ + + L+ E L GY T + ++ + ++N R V+ + + + Sbjct: 288 FGKFIASKLIPLSNIIGEFRLTGYVTAATSETSLPSSELQFFYVNRRFVRRTLLHNAVSK 347 Query: 271 AY---AETI--PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKA 325 A+ ++ P VL LE P D+ P K+ I F + + + ++++ Sbjct: 348 AFALACASLDSTTHGCPGYVLCLECPPDAYDITFDPEKTLIEFTDWKTPLDLLKSALKQV 407 Query: 326 I 326 Sbjct: 408 W 408 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 101/285 (35%), Gaps = 28/285 (9%) Query: 319 IQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 + A+ +S +M+ F ++AP P + + L + R + Sbjct: 473 RRRQTFALQSSAYEDASPPICQMVEPF--EDAPALSAPVVEEGGGSITDLLADWKRRRAD 530 Query: 379 NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 DL + +E + + + Q G + + + L+ +DQHAA ER+ Sbjct: 531 RDLNVMETVPVAEISRNLLDDAKVLTQWGK------KFILAMSASGDLLAIDQHAADERI 584 Query: 439 IFEKMR--------------QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 + E++R ++ + + L + L E A++ + + G Sbjct: 585 LLEQLRASLIRSVDHRGKLHTYSPASPMPTTVLGRSQPCLLTASELAILRANSSLVWSWG 644 Query: 485 IKAERFG------PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 + E + + +P + L + + ++ + T + +LA Sbjct: 645 WRWEDVANCDGDTDEGVKLTGLPTVEGTMLGADALAEYLRQVSVTGPTSAPPPALHRLLA 704 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + AC +I G + E LL + + C HGRPT + L Sbjct: 705 SKACRSAIMFGDNLGQDECVALLGSLTRTELPLHCAHGRPTSVML 749 >gi|255561427|ref|XP_002521724.1| conserved hypothetical protein [Ricinus communis] gi|223539115|gb|EEF40711.1| conserved hypothetical protein [Ricinus communis] Length = 1137 Score = 191 bits (485), Expect = 3e-46, Method: Composition-based stats. Identities = 105/491 (21%), Positives = 197/491 (40%), Gaps = 45/491 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I++L E + N + +G I+ + ++EL+ NSLDA +S+V + G G + ++ D+G Sbjct: 3 TIKRLPESVRNSMRSGIILFDLTRVVEELVFNSLDAGASKVWVYV-GAGTCYVKVVDDGC 61 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIH-TFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G++ + + + QR+ TSK+ D + +FGFRGEAL SI VS L ++++ G Sbjct: 62 GISRDGLVLLGQRYVTSKLHHFADMDAANESFGFRGEALASISDVSLLEIITKARGRPNG 121 Query: 119 AQIAISGEKISS--VRPVAMNPGTIVEVRDLFFTIPARL-NFLKSEQVETNLITDVIRRM 175 + + G K V + GT V VRDLF+ P R S + + + I R+ Sbjct: 122 YRKVLKGSKCLYLGVNDDRKDVGTTVVVRDLFYNQPVRRKCMQSSLKKVLDSVKKCILRI 181 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A + KVSF I+S + + ++ G + +N EL+ + + L G Sbjct: 182 AFVHSKVSFKVIDIESEDELLYTRPSSALSLLM--SSFGIEDLNFFHELDVSNGVLKLSG 239 Query: 236 YTGIPTFNRGNANQFY--VFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR 293 Y P + + N + K + P +L L Sbjct: 240 YISGPCNSLTIKFESLDPWKANSIPQKGKRCRPQVC------------PAYILNLSCPLA 287 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQK--------------AINKKGISTSSVLSK 339 D+ P+K+++ F+ I NFI S+Q I + +S L Sbjct: 288 LYDLTFEPSKTHVEFKEWIPILNFIENSVQYLWTGSMTYGMLSHLCIAVHDLYSSFDLLD 347 Query: 340 KMISSFHQDNAPKTHLPKYAT--SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 + ++ K + K+ L + Q K+ Q + L S + + + Sbjct: 348 ADLIENNEFARDKHEIKKHKPCNYLPSPQFKMLAQNDVADDYFLEDSTQRSSDHVENHIL 407 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + + + + + ++ + ++++ V +D H + L KM + +S+ Sbjct: 408 DLDWQNGSIEL------RSLEMDESSEKAVSMDYHKFDDELEVTKMNEKPFLRSCSSRGN 461 Query: 458 LTPEIIDLLEG 468 L + Sbjct: 462 LPLDGSLFSSE 472 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 68/427 (15%), Positives = 138/427 (32%), Gaps = 45/427 (10%) Query: 206 PERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFIL 265 + + ++ + L + + G + +RG+ + + + + Sbjct: 678 KDINTFFSQRCNAHDVLSLEHPNISLPETGCLPLRFHSRGHKSHHDYELRESHFKFQDQE 737 Query: 266 STIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRN-----PTIIRNFIIQ 320 P + R V +N H + T + + Sbjct: 738 QDNFPKERSRRSQSAPPFY----KHKRRFVSLNHHSMIKEGNAHDIHISTETDVSKHLYF 793 Query: 321 SIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL-----------PKYATSLTNTQEKL 369 A + S V +++ ++ L P SL N Sbjct: 794 QPNYAEDLMFCIRSDVKNRQESMMGMKETKEGESLKYLQNTWVDDSPVKDLSLANDLNSF 853 Query: 370 FLQENRLSTNDLLPSDDP--------TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 L +N +++ + D ++ ++ E + Q+ +I Sbjct: 854 VLMQNNNTSSKIDYQHDILDISSGFLYFAGNSLVPESLHKNCLEDAKVLQQVDNKFIPIV 913 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL-TPEIIDLLEGECALIMEHDEDL 480 L I+DQHAA ER+ E++RQ + + T L + + L E L+ + + Sbjct: 914 ANGTLAIIDQHAADERIRLEELRQKVLCGEARTVTYLDVEKELILPEIGYQLLQNYAAQI 973 Query: 481 HRLGIK---------------AERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 G P + + +P IL L + + ++ D+ Sbjct: 974 RDWGWICNIQAHSGSFKKNLNILHQEPTVVTLLAVPCILDVNLSDGDLLEFLQQLADTDG 1033 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL-K 584 + T+ + +L AC G+I G + E ++ E++K QC HGRPT + L Sbjct: 1034 SSTMPQSVLRVLNFKACRGAIMFGDSLLRSECALIVEELKKTSLCFQCAHGRPTTVPLVD 1093 Query: 585 LSDIEKL 591 L +++K Sbjct: 1094 LVELQKQ 1100 >gi|291406751|ref|XP_002719688.1| PREDICTED: mutL homolog 3 isoform 1 [Oryctolagus cuniculus] Length = 1421 Score = 191 bits (484), Expect = 4e-46, Method: Composition-based stats. Identities = 81/354 (22%), Positives = 143/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL+ NS+DAE++ V + Q+ DNG G Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELVLNSIDAEATCVAVRV-NMETYQVQVIDNGCG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S ++ R+ TSK + D N +GFRGEAL SI + S + + S+ + Sbjct: 61 MGSVDVDKVGNRYFTSKCTSVQDLENPRFYGFRGEALASIADMASTMEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPVAMN---PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQNGKALKAYEADLTRPSAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDMCSRFCQIYGLRKSQKLREIHFKYKEFELNGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIR-----------------TAYAETIPLG 279 N N ++F+N R V + I + + P Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKSGSASRQMNSSPRH 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 R Y + V+ ++ + DV + PAK+ I F+N I + ++ + + Sbjct: 297 RSTPELYGIYVMNVQCPFCEYDVCMEPAKTLIEFQNWDTPLVCIQEGVKLFLKQ 350 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 46/193 (23%), Positives = 88/193 (45%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ + K+ S T++ P I + E + L+ + Sbjct: 1186 LVLVDQHAAHERIRLEQLLTESYEKQQPQGSGRKKLLSSTIIPPLEITVTEEQRRLLRCY 1245 Query: 477 DEDLHRLG--IKAERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 + L LG + I + ++P ++ + + LR+ ++ Sbjct: 1246 HKRLEDLGLEFIFPDTSDSLILVGKVPLCFVEREANELRRGRSTVTKSIVEEFLREQVEL 1305 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP Sbjct: 1306 LQTTGSIQGTLPLTVQKVLASQACHGAIKFNDGLSLEESRRLIEALSCCQLPFQCAHGRP 1365 Query: 579 TFIKLKLSDIEKL 591 + + L +D++ L Sbjct: 1366 SMLPL--ADMDHL 1376 >gi|291406753|ref|XP_002719689.1| PREDICTED: mutL homolog 3 isoform 2 [Oryctolagus cuniculus] Length = 1453 Score = 191 bits (484), Expect = 4e-46, Method: Composition-based stats. Identities = 81/354 (22%), Positives = 143/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL+ NS+DAE++ V + Q+ DNG G Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELVLNSIDAEATCVAVRV-NMETYQVQVIDNGCG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S ++ R+ TSK + D N +GFRGEAL SI + S + + S+ + Sbjct: 61 MGSVDVDKVGNRYFTSKCTSVQDLENPRFYGFRGEALASIADMASTMEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPVAMN---PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQNGKALKAYEADLTRPSAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDMCSRFCQIYGLRKSQKLREIHFKYKEFELNGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIR-----------------TAYAETIPLG 279 N N ++F+N R V + I + + P Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKSGSASRQMNSSPRH 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 R Y + V+ ++ + DV + PAK+ I F+N I + ++ + + Sbjct: 297 RSTPELYGIYVMNVQCPFCEYDVCMEPAKTLIEFQNWDTPLVCIQEGVKLFLKQ 350 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 46/193 (23%), Positives = 88/193 (45%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ + K+ S T++ P I + E + L+ + Sbjct: 1218 LVLVDQHAAHERIRLEQLLTESYEKQQPQGSGRKKLLSSTIIPPLEITVTEEQRRLLRCY 1277 Query: 477 DEDLHRLG--IKAERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 + L LG + I + ++P ++ + + LR+ ++ Sbjct: 1278 HKRLEDLGLEFIFPDTSDSLILVGKVPLCFVEREANELRRGRSTVTKSIVEEFLREQVEL 1337 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP Sbjct: 1338 LQTTGSIQGTLPLTVQKVLASQACHGAIKFNDGLSLEESRRLIEALSCCQLPFQCAHGRP 1397 Query: 579 TFIKLKLSDIEKL 591 + + L +D++ L Sbjct: 1398 SMLPL--ADMDHL 1408 >gi|310793283|gb|EFQ28744.1| DNA mismatch repair protein MutL [Glomerella graminicola M1.001] Length = 230 Score = 190 bits (483), Expect = 5e-46, Method: Composition-based stats. Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 8/230 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I +L E + + ++ P +KEL+EN++DA ++ +E I+ Q+ DNG Sbjct: 1 MPISQLPESTCQLLKSTTVVISPLSLVKELVENAIDANATNIEIGISANTVDKIQVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFS--NIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G++ E+ +R TSK+ + T GFRG+AL S+ S LT+ +R Q++ Sbjct: 61 HGISPEDYHAVGRRSHTSKLRTFKELQYKGGKTLGFRGDALASMNTCSELTITTRTSQDS 120 Query: 117 TGAQIAISG--EKISSVRPVAMNPGTIVEVRDLFFTIPARLN-FLKSEQVETNLITDVIR 173 A + + E I+ R + + GT V+V +LF +P R +K + I ++++ Sbjct: 121 VAALLVLKNGVEGIADKRLASGSMGTTVDVSNLFAAVPVRRQLAIKESKKSCGQIKELLQ 180 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNF-PERISQVIGEDFINNAV 222 A+ P + K ++ ++ G E QV G D ++ V Sbjct: 181 TYALTRPYTRLSLKIFKDHKLSWSYAPGQGAHVREAALQVFGPDLVSQCV 230 >gi|302683344|ref|XP_003031353.1| hypothetical protein SCHCODRAFT_16115 [Schizophyllum commune H4-8] gi|300105045|gb|EFI96450.1| hypothetical protein SCHCODRAFT_16115 [Schizophyllum commune H4-8] Length = 462 Score = 190 bits (483), Expect = 5e-46, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 4/179 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + + I++I +G+++ A+KEL+ENSLDA ++ +E G ++ DNG G Sbjct: 7 IKAIDKASIHRITSGQVVIDLQTAVKELLENSLDAGATNIEVRFKNHGLKSIEVVDNGSG 66 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGA 119 + ++ +H TSK++ +D + + TFGFRGEAL S+ A+ T+ + Sbjct: 67 IAEKDFEGIALKHHTSKLAAFEDLTTVRTFGFRGEALSSLCALCDGFTITTATQGPLGEM 126 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRMAI 177 KI VA GT V++ ++F +P R ++ + E ++ A+ Sbjct: 127 IEMDRNGKIKKRSKVARQRGTTVQLSNIFTPLPVRRKEFERNAKREFGKALHLLNAYAL 185 Score = 139 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 53/232 (22%), Positives = 94/232 (40%), Gaps = 21/232 (9%) Query: 375 RLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQT----------TD 424 L D + + T + N + + Q ++ +II++ D Sbjct: 215 SLPPADSISQNPATSTAANALARVIDKADFAKMDVVGQFNRGFIIARRRKQPESGGSSMD 274 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 L IVDQHA+ E+ FE ++ +TKI SQ LL P ++L + + +H + L + G Sbjct: 275 DLFIVDQHASDEKYNFETLQ---QTTKIESQRLLRPRPLELTAADEMIARDHLDVLRQNG 331 Query: 485 IKAERFGPN------AIAIREIPAILSKKNIPQLLRDIIDEIIDS-STTYTLQDRIENIL 537 + E G + + P S + L ++I + D+ + + Sbjct: 332 FEVEDSGAGNDSDGARLRLVAQPVSKSTTFDMRDLEELIHLLQDAPGGAAVRCSKARAMF 391 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL-KLSDI 588 A+ AC S+ G + +M +++ M C HGRPT L L+D+ Sbjct: 392 ASRACRKSVMIGMPLTKGQMTAVVQHMGTMDQPWNCPHGRPTMRHLIDLADL 443 >gi|327303696|ref|XP_003236540.1| DNA mismatch repair protein [Trichophyton rubrum CBS 118892] gi|326461882|gb|EGD87335.1| DNA mismatch repair protein [Trichophyton rubrum CBS 118892] Length = 1038 Score = 190 bits (483), Expect = 5e-46, Method: Composition-based stats. Identities = 87/425 (20%), Positives = 151/425 (35%), Gaps = 49/425 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I G ++ DNG Sbjct: 3 TIKPIEARSVHQIQSGQVIVDLY-------------------VRFKNNGLDLIEVQDNGH 43 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ +H TSK+S D +++ TFGFRGEAL S+ AVS+LT+++ Q A Sbjct: 44 GISPNNYESLALKHYTSKLSTFADLTSLQTFGFRGEALSSLCAVSNLTVVTAEAQQAPRA 103 Query: 120 Q--IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 K+ S + VA GT V + +LF +P R K+ + E + ++ A Sbjct: 104 SKLDFEFSGKLKSTQVVAGQKGTTVSIENLFKPLPVRRRELEKNVKREYGKVIALLHAYA 163 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVE----------- 223 V F + +T N E IS V G + + Sbjct: 164 CISTGVRFNVKNQMPKGKSVVVFTTKSNPTTRENISNVYGAKTLLALMPLDLGLEYEPST 223 Query: 224 -----LNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 ++ SN+I + G+ P F R ++ F+N R I Y Sbjct: 224 AAKRFSSQASNKIFVHGHISKPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYKSF- 282 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 L + P + E+D DVNV P K I + + + + ++ + + Sbjct: 283 NLSQSPFIFANFEMDTSAYDVNVSPDKRTILLHDAGALIESL----KASLTELFENEDQT 338 Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 + ++ Q S+ Q+K + L DD +P Sbjct: 339 VPVSQLTFSKQSQLTSKRGQTPPASVDAIQDKPEEPPGNAVYSQELGQDDIVEENGPEPT 398 Query: 397 EESEA 401 + + Sbjct: 399 QTPPS 403 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 78/206 (37%), Gaps = 45/206 (21%) Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 Q D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I+++ Sbjct: 795 AEQVQDELFIIDQHASDEKYNFERLQ---AETTVQNQRLVKPKTLDLTAVEEEVIIDNLA 851 Query: 479 DLHRLGIKAE-------RFGPNAIAIREIP----AILSKKNIPQLL-------------- 513 L + G E G I +P + +++ +L+ Sbjct: 852 ALEKNGFIVEIDTSGDEPIGRRCKLI-SLPLSKEVVFDTRDLEELIVLLSEAPQQSQSNL 910 Query: 514 ----RDIIDEIIDSSTTY------------TLQDRIENILATMACYGSIRSGRKMQSIEM 557 RD +D + ++ + A AC SI G+ + +M Sbjct: 911 GKRARDELDSDAEHIEPSGVASSPFSDYLVPRPSKVRKMFAMRACRSSIMIGKNLTHRQM 970 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKL 583 +++ M C HGRPT L Sbjct: 971 ETVVKHMGTIDKPWNCPHGRPTMRHL 996 >gi|308161091|gb|EFO63551.1| Pms1-like protein [Giardia lamblia P15] Length = 726 Score = 190 bits (483), Expect = 6e-46, Method: Composition-based stats. Identities = 106/699 (15%), Positives = 220/699 (31%), Gaps = 124/699 (17%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR L I A + P I L+ENSLDA +S + V+ G + DNG Sbjct: 13 RIRSLPASDSRLILATQQFPDPHKVISALLENSLDAGASEISIVLESMGIKSITVNDNGC 72 Query: 62 GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 G+ ++P +Q + +I+ +GE++ I A+ + + S + + Sbjct: 73 GL---DLPT-LQALGSCRITTAIPQPGMVNHKGESIFLISALGTVLVTSSLGDDP--YER 126 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE---QVETNLITDVIRRMAIA 178 IS ++ + + GT V V++L+ +IP R + + + ITD+++ A+A Sbjct: 127 VISENTSNARQATRASRGTTVVVQNLYKSIPVRQKYFSTPSLRKKLLLSITDLVQSYALA 186 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGED---------FINNAVELNEKSN 229 + F ++ ++ + + +R ++ G + F + S Sbjct: 187 NYTLGFRLIVDETVHIDVSS-APENSIHDRYVELFGREVRSLVGFFSFETRLGYTVKASL 245 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRT-------------AYAETI 276 G T ++ NG+ + ++ ++ A + Sbjct: 246 ACPDTGITSQTKLGHARK--IFLSTNGKPILCSSLIEALQQTYARTSATNIPIGALNLVL 303 Query: 277 PLGRY------PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRN-----------FII 319 P G Y P L ++ VD+ +++ N + I + I+ Sbjct: 304 PPGTYALARSTPYDTLQIQGLNLFVDLLSEEYLAWLLRYNNSTITDRYIERSTTSKSLIV 363 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDN---APKTHLPKYATSLTNTQEKLFLQENRL 376 ++ + S SS ++ DN + +H + T E + + Sbjct: 364 KAAKGKSANSPYSKSSFGARSHQKDAMPDNIIISRVSHTKAASFFHTRASELRQVYHSET 423 Query: 377 STNDLLP--------------------SDDPTYSEDNDPVEESEATHYQLGIACAQI--- 413 +TN L S+ + + E ++ + + + Sbjct: 424 TTNTELCSGGTPSTLGTIGLSELQTSISNPQPHENLDPIKIEGQSCDSEGKVRIGPVRRR 483 Query: 414 ------------HQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 + YI L+ + + S + + Sbjct: 484 GSTSGFRQQDFANLKYICQYNQSFLIAQLNNVFYLIDQHAAHEAKHFSNYWHNPHCYLSK 543 Query: 462 IIDLLEGECALIMEHDEDLHRL---------GIKAERFGPNAIAIREIPAILSKKNIPQL 512 + L + L G + R N + I P++ + + Sbjct: 544 QKTITPLRLILRPDEKLCLEEFLSSVVFDTIGFEL-RMSENHVLISSFPSLFGQTLTEED 602 Query: 513 LRDIIDEI-------------IDSSTTYT------------LQDRIENILATMACYGSIR 547 R+ + + D+ + +I I A+ +C SIR Sbjct: 603 FREYLLSLYGYTREYVESICTKDTGSKTRENSLLCLLHNNIAPPKIRKIFASKSCKASIR 662 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 G + R++ ++ C HGRP L L+ Sbjct: 663 LGDPLLDSTAKRVIADLASCEKPFNCPHGRPVLRLLDLA 701 >gi|237708005|ref|ZP_04538486.1| LOW QUALITY PROTEIN: DNA mismatch repair protein mutL [Bacteroides sp. 9_1_42FAA] gi|229457991|gb|EEO63712.1| LOW QUALITY PROTEIN: DNA mismatch repair protein mutL [Bacteroides sp. 9_1_42FAA] Length = 377 Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats. Identities = 80/378 (21%), Positives = 159/378 (42%), Gaps = 33/378 (8%) Query: 247 ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYI 306 + F+NGR ++ + I AY + +P+G + E++P +DVN+HP K+ I Sbjct: 2 RSPPIFFVNGRYMRHPYFHKAIMDAYEQLVPVGEQVSYFIYFEVNPANIDVNIHPTKTEI 61 Query: 307 RFRNPTIIRNFIIQSIQKAINKKGISTSSVLS------------------KKMISSFHQD 348 +F N I + ++++ + K S + ++++ D Sbjct: 62 KFENEQAIWQILAAAVKETLGKFNAVPSIDFDTEGMPDIPAFDASPYTGIQPPKTTYNPD 121 Query: 349 NAP---KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ 405 P P + + E+L+ R +++ D+ Y + E Y Sbjct: 122 YNPFNVSAAPPSSYSKPSKDWEQLYAGLERHASSQNFHPDENDYRAEETSPAEENPGLYD 181 Query: 406 L---------GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 Q +I++ GL+I+DQ AH R++++K + + SQ Sbjct: 182 HVEDSSVSEKSGQHYQFKGRFILTSVKSGLMIIDQQRAHIRILYDKYIDQISRRQGISQG 241 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 +L P+I+ E A++ E EDL LG + G + AI +PA + N L++++ Sbjct: 242 MLFPDIVQFPLSEVAILQEIMEDLSFLGFELTDLGGGSYAINGVPAGIEGLNPIDLIQNM 301 Query: 517 IDEIIDSSTTYTLQDRIENILA-TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 + ++ +++ +++ILA T+A +I G+ + + EM L+ + + Sbjct: 302 VHTAMEKGG--KVKEEVQSILALTLAKATAIVPGQVLTNEEMTGLVDGLFAVATPNYTPD 359 Query: 576 GRPTFIKLKLSDIEKLFG 593 G+ + D+EKLF Sbjct: 360 GKTVLSVINEDDLEKLFK 377 >gi|326334736|ref|ZP_08200943.1| DNA mismatch repair protein MutL [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693186|gb|EGD35118.1| DNA mismatch repair protein MutL [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 409 Score = 190 bits (482), Expect = 7e-46, Method: Composition-based stats. Identities = 70/410 (17%), Positives = 168/410 (40%), Gaps = 24/410 (5%) Query: 204 NFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKF 263 + +RI QV G V + E++ + +QG+ + N + + +N R +++++ Sbjct: 3 SLRKRIVQVFGSRLNEQLVPVEEQTEVVNIQGFISKN-SPKRNKSLQFFMVNHRFIKNRY 61 Query: 264 ILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ 323 + + +A+ + G P L LEIDP+ +D+N+HP K+ I+F N I + +++ Sbjct: 62 LHHAVVSAFEGLLKEGEQPEYFLYLEIDPKHIDINIHPTKTEIKFDNDHTIYALLRSAVK 121 Query: 324 KAINKKGISTSSVL--------------SKKMISSFHQDNAPKTHLPKYATSLTNTQEKL 369 ++ + + + + + ++ D + + Sbjct: 122 HSLGQFQVLPTIDFSLDESQEIPYSYKDKEAKMPTYQVDRNFNPFKMEEKDVSSKRNNPP 181 Query: 370 FLQENRLSTNDLLPSDDPTYSEDNDPVEES-------EATHYQLGIACAQIHQNYIISQT 422 F + + S+ N+ ++E E + YII+ Sbjct: 182 FSFASNRNAPQWEALYTGFPSKVNESLKEEVPLSSLIEVQTETKVQTILYFQKKYIITYL 241 Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 D ++ + AH+R+++E+ + + SQ+LL P + E + L+R Sbjct: 242 KDKVLFIHVSRAHQRILYERFYKSISQGGSISQSLLFPLEFEFSPVEILSLQSLTSSLNR 301 Query: 483 LGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMAC 542 G E N I +P ++ + + ++LR ++++ ++ L + E++ +A Sbjct: 302 AGFLLE-IEQNKIRFTGLPPLVKESQVEEILRQLLEKAMEDIPQEEL-SQRESLAKNLAK 359 Query: 543 YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 +I++G+ + E +L+ ++ + G+ +I+ +++E F Sbjct: 360 SLAIKAGQSLSPEEQEQLVYDLFSCKETQVSPFGKKIYIEFPFNELENRF 409 >gi|303321187|ref|XP_003070588.1| DNA mismatch repair protein, C-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240110284|gb|EER28443.1| DNA mismatch repair protein, C-terminal domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 806 Score = 190 bits (482), Expect = 7e-46, Method: Composition-based stats. Identities = 83/342 (24%), Positives = 141/342 (41%), Gaps = 25/342 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I +L + I + I P ++ELI+N+LDA ++ + ++ + DNG Sbjct: 1 MPIAELDRAAAHAIGSASAISDPCSVVRELIDNALDANATIISVELSANLLDSIHVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVSHLT-LMSRPPQN 115 G+ E+ + +++CTSKI DD ++ GFRG+AL S +S T +++R Sbjct: 61 LGIPPEDRELICRQNCTSKIKTLDDLKHVGGKLLGFRGQALASTTQMSESTVIITRITAE 120 Query: 116 NTGAQIAI-SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 T + + I S VA GT V V +P R + KS + I ++ Sbjct: 121 TTASILEFGRAGDILSKGMVAHPVGTSVRVSGFLKYLPVRRQMVLKSLSKIVSRIKKALQ 180 Query: 174 RMAIAYP--KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI 231 A++ P ++S S K + + + + IS+VIG + + +E + N+ Sbjct: 181 NYALSRPCVRLSLKISRQKRGFAWIYAPKQSPSVADAISKVIGAEVAAHCLEQSLTYNDP 240 Query: 232 T----LQGYTGIPTFNRGNA--NQFYVFINGRT-VQDKFILSTIRTAYAETIP--LGR-- 280 +G + ++F++GR K I + Y I GR Sbjct: 241 NPENSDEGKSTAQVHAVIPKLDAGQFIFVDGRPLSTSKGIAKDLVKIYKSYINRTFGRPC 300 Query: 281 -----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 P + L L P DVNV P+K + F + I Sbjct: 301 TSAITDPFMYLYLSCPPGIYDVNVDPSKDDVLFADSRSILCL 342 >gi|302925794|ref|XP_003054166.1| hypothetical protein NECHADRAFT_89983 [Nectria haematococca mpVI 77-13-4] gi|256735107|gb|EEU48453.1| hypothetical protein NECHADRAFT_89983 [Nectria haematococca mpVI 77-13-4] Length = 949 Score = 190 bits (482), Expect = 7e-46, Method: Composition-based stats. Identities = 84/420 (20%), Positives = 159/420 (37%), Gaps = 34/420 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + + I P +KEL++NS+DA ++ +E ++ DNG Sbjct: 1 MSISALPPSTARLLGSSTAIADPLSLVKELVDNSIDAGATSIEITTTSNTVDKIRVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFS--NIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+ E+ +R TSK+ D+ T GFRGEAL S +++ + + +R Q+ Sbjct: 61 RGIRLEDYDSLGRRAHTSKLRTFDELEFKGGTTLGFRGEALASANSLATIKVSTRTAQDP 120 Query: 117 TGAQIAISGEK--ISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 G+ + + + I +P++ GT V+ LF IP R K + I ++ Sbjct: 121 VGSLLFLKFGQGGIEKQQPISSTVGTTVQAWKLFDNIPVRKQTALKGSRKTLTNIKKLLE 180 Query: 174 RMAIAYPKVSFTFSTIKS-NRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 A+A P + +F + + N E I+QV G + E++ + Sbjct: 181 GYALALPHLKLSFKVPGDPCQPWLYSPCALMNTREAITQVFGHALVTQLDEISSGTGTDG 240 Query: 233 LQGYTGIPTFNRGN------------ANQFYVFINGRTVQD-----KFILSTIRTAYAET 275 Y ++ ++ R + K I++ + + + T Sbjct: 241 PANYLSQEIVLTAFLPSRGSDAKIVKNKGAFISVDSRPISSTTGTGKKIVAIFKASISRT 300 Query: 276 IPLGR------YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 + + P + L ++ P D NV P K + F++ I + K K Sbjct: 301 LASTKDLRSLPNPFMQLSIKCQPGSYDPNVSPLKDEVLFKDEPAILSCFQALCDKVYRGK 360 Query: 330 GISTSSVLSKKMIS---SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDD 386 T+ V + + +T LP+ + + + EK + +T + +D Sbjct: 361 DSVTTGVAPGREEQRNVRITRQMQRETSLPQTSVTPRGSGEKPTGVNCQGNTQESSTMND 420 >gi|169602615|ref|XP_001794729.1| hypothetical protein SNOG_04311 [Phaeosphaeria nodorum SN15] gi|160706213|gb|EAT88071.2| hypothetical protein SNOG_04311 [Phaeosphaeria nodorum SN15] Length = 1030 Score = 190 bits (482), Expect = 7e-46, Method: Composition-based stats. Identities = 82/435 (18%), Positives = 160/435 (36%), Gaps = 33/435 (7%) Query: 16 AGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +G+++ PS +KELI+N+LDA + + I QI D+G G+ +E+ + +R+ Sbjct: 3 SGQVLVDPSSLVKELIDNALDARAKSIFVDITANTIDSIQIKDDGHGIPAEDRALVCRRY 62 Query: 76 CTSKIS--DDFSNI--HTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISS 130 CTSKI D + GFRGEAL S+ +S L + +R ++ + Sbjct: 63 CTSKIRYFYDLKEVGGKWLGFRGEALSSMAEMSGTLAVTTRVEGEPVAVKLKYGRDGEIE 122 Query: 131 VRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 V F IP R K+ I +++ A+A P V F + Sbjct: 123 RG-----------VTQFFEYIPVRRQTATKNAAKCLAKIRRLVQAYALARPAVRFRLHVL 171 Query: 190 KSNRYK---MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGN 246 K+ K + TN N + + +VI +D +S+ + + PT N Sbjct: 172 KAKNNKGDFIYAPKTNSNIEDAVLKVISKDCALQCDWTALESDGFEVHAFLPKPTANESK 231 Query: 247 ANQFYVF--INGRTVQD-KFILSTIRTAYAETIPLG-------RYPVVVLLLEIDPRQVD 296 + F I+ R V + + + + A E + + P + + P D Sbjct: 232 IANYGAFISIDSRPVSNSRGTIKQVVAAVKERLRKSSQSLTAAKDPFFCMNIICPPDSYD 291 Query: 297 VNVHPAKSYIRFRNPTIIRNFI---IQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKT 353 N+ PAK + F + ++ + + ++S + + + S F P Sbjct: 292 PNIEPAKDNVMFEDGKVVLDAVDKLLRSYYPEAMETEVEPPIPGQQHAQSDFEDSWNPMP 351 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 + + + Q+++ ++ ++ + G A I Sbjct: 352 NPVHLEPTAELVGKSKLDQQSKDPRWRSSMYGIDEDDLEHLQEDQPMVIEEEEGRRAADI 411 Query: 414 HQNYIISQTTDGLVI 428 + +++ + Sbjct: 412 SNPWTVARMNSIIKP 426 >gi|302412381|ref|XP_003004023.1| DNA mismatch repair protein mutL [Verticillium albo-atrum VaMs.102] gi|261356599|gb|EEY19027.1| DNA mismatch repair protein mutL [Verticillium albo-atrum VaMs.102] Length = 651 Score = 190 bits (482), Expect = 7e-46, Method: Composition-based stats. Identities = 91/439 (20%), Positives = 160/439 (36%), Gaps = 51/439 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I +L + Q+ A ++ PS A+KEL++N+LDA ++ VE +I+ Q+ DNG Sbjct: 1 MSIARLPDAATRQLCATLVLVSPSSAVKELLDNALDAGATAVEVLISANTLGRIQVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFS--NIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+ E+I + TSK+ ++ T GFRG AL S +S + + +R Q+ Sbjct: 61 HGIAPEDIKCVGRPGHTSKLRSFEELQFKGGKTLGFRGNALSSAACISKVVITTRTAQDK 120 Query: 117 TGAQI--AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLN-FLKSEQVETNLITDVIR 173 + S R V+ GT VE+ +L+ P R F K I +++ Sbjct: 121 VASSFILGSSSGDSVVSRTVSAPVGTTVELSNLYSDFPVRRKVFFKEAPKSIASIKTLLQ 180 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQS-TNGNFPERISQVIGEDFINNAVELNEK----- 227 A+A P+ TF + + ++ N E Q+ G + VE Sbjct: 181 AYALARPETKLTFKVLGDEKSAWSYAPRERFNPREATLQMFGVSLASQYVERTISTELLD 240 Query: 228 ------------------SNEITLQGYTGIP--TFNRGNANQFYVFINGRTV-QDKFILS 266 N I ++ P + YV ++ R + +D+ I Sbjct: 241 STASTTTPPNKGENDESGPNCIIIRALLPKPDADHAKIAGKGAYVSVDSRPMGRDRGIFK 300 Query: 267 TIRTAYAET-----IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 + R + + ++ D+N+ PAK + FR+ + + I Sbjct: 301 KLVKIINIFFQKASNCTTRDLFLYVDIKCTAGIYDLNISPAKDEVVFRSEQTVLDLINNL 360 Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 L S ++ +T +Y+ L +Q+ N Sbjct: 361 CL------------ALYTPHEYSGDNESPNQTECSRYSPILVLSQKNTRDWPGASHVNQR 408 Query: 382 LPSDDPTYSEDNDPVEESE 400 P E +E+ E Sbjct: 409 TPESPLLTDEYEMDLEDHE 427 >gi|255931125|ref|XP_002557119.1| Pc12g02280 [Penicillium chrysogenum Wisconsin 54-1255] gi|211581738|emb|CAP79855.1| Pc12g02280 [Penicillium chrysogenum Wisconsin 54-1255] Length = 892 Score = 189 bits (481), Expect = 1e-45, Method: Composition-based stats. Identities = 79/366 (21%), Positives = 146/366 (39%), Gaps = 36/366 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L +K I I + +I P +KELI+N+LDA ++ ++ I+ Q+ D+G Sbjct: 1 MPIEALPQKTIRAIGSTSVISDPYSVVKELIDNALDASTTSLQIEISQNTLDVIQLKDSG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVSH-LTLMSRPPQN 115 G++ E+ +R TSKI DD N+ + GFRGEAL S+ +S L + +R Sbjct: 61 HGISPEDQQYVCKRAFTSKIQTLDDLKNVGGSSLGFRGEALASVAGLSGVLAVTTRVKSE 120 Query: 116 NTGAQ-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 G +++ + + GT V + D IP R K + I +++ Sbjct: 121 VAGRCSKYGRNGELTGTQRTSHPVGTTVRITDFLKHIPVRRQTALKCATKSLSRIKKLVQ 180 Query: 174 RMAIAYPKVSFTFSTIK---SNRYKMNFQSTNGNFPERISQVIGEDFINNA-VELNEKSN 229 AIA+P F+ +K N + + + + +V G + ++ V+ + Sbjct: 181 AYAIAHPSKRFSLKVLKAKIENNNWTYAPNADASLSDAALKVAGREVSSSCDVKRLSSQS 240 Query: 230 EITLQGYTGIPTF--------------NRGNANQFYVFINGRTVQD---------KFILS 266 QG ++ N+ Y+ ++GR + K Sbjct: 241 TPGNQGGATDQQDYEAIAFLPNTQSDTSKINSAGQYISVDGRPLSSNRGIGHEIVKIFKQ 300 Query: 267 TIRTAYAETIPLGRY--PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQK 324 +R A +++ P + L + DVN+ PAK + F + ++ + + Sbjct: 301 YVRVAASKSESSKSVSDPFLCLQIRCPRGTYDVNIEPAKDDLLFEDRGVVLALVENLFRD 360 Query: 325 AINKKG 330 + Sbjct: 361 QYGEID 366 >gi|320035938|gb|EFW17878.1| DNA mismatch repair protein mutL [Coccidioides posadasii str. Silveira] Length = 814 Score = 189 bits (480), Expect = 1e-45, Method: Composition-based stats. Identities = 83/350 (23%), Positives = 142/350 (40%), Gaps = 33/350 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I +L + I + I P ++ELI+N+LDA ++ + ++ + DNG Sbjct: 1 MPIAELDRAAAHAIGSASAISDPCSVVRELIDNALDANATIISVELSANLLDSIHVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVSHLT-LMSR-PPQ 114 G+ E+ + +++CTSKI DD ++ GFRG+AL S +S T +++R + Sbjct: 61 LGIPPEDRELICRQNCTSKIKTLDDLKHVGGKLLGFRGQALASTTQMSESTVIITRITAE 120 Query: 115 NNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 I S VA GT V V +P R + KS + I ++ Sbjct: 121 TTASILGFGRAGDILSKGMVAHPVGTSVRVSGFLKYLPVRRQMVLKSLSKIVSRIKKALQ 180 Query: 174 RMAIAYP--KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI 231 A++ P ++S S K + + + + IS++IG + + +E + N+ Sbjct: 181 NYALSRPCVRLSLKISRQKRGFAWIYAPKQSPSVADAISKIIGAEVAAHCLEQSLTYNDP 240 Query: 232 T----------LQGYTGIP----TFNRGNANQFYVFINGRT-VQDKFILSTIRTAYAETI 276 Q + IP ++ ++F++GR K I + Y I Sbjct: 241 NPENSDEGKSTAQVHAVIPKLDADISKLENKGQFIFVDGRPLSTSKGIAKDLVKIYKSYI 300 Query: 277 P--LGR-------YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 GR P + L L P DVNV P+K + F + I Sbjct: 301 NRTFGRPSTSAITDPFMYLYLSCPPGIYDVNVDPSKDDVLFADSRSILCL 350 >gi|1304125|dbj|BAA07514.1| PMS4 [Homo sapiens] gi|1526554|dbj|BAA07471.1| hPMS4 [Homo sapiens] Length = 252 Score = 189 bits (480), Expect = 1e-45, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 4/180 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+K+++ENSLDA ++ ++ + G +++ NG G Sbjct: 27 IKPIDRKSVHQICSGPVVLSLSTAVKKIVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 86 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 87 VEEENFEGLTLKHHTSKIQEFADLPQVETFGFRGEALSSLCALSDVTISTCHVSAKVGTR 146 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPA-RLNFLKSEQVETNLITDVIRRMAIA 178 + + KI P GT V V+ LF T+P F ++ + + R Sbjct: 147 LVFDHDGKIIQKTPYPHPRGTTVSVKQLFSTLPVHHKEFQRNIKKKRACFPFAFCRDCQF 206 >gi|225679750|gb|EEH18034.1| DNA mismatch repair protein [Paracoccidioides brasiliensis Pb03] Length = 853 Score = 189 bits (480), Expect = 1e-45, Method: Composition-based stats. Identities = 65/357 (18%), Positives = 135/357 (37%), Gaps = 40/357 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + + + ++ P +KEL++N LDA ++ + ++ Q+ DNG Sbjct: 1 MAISALRQDTVRAVRLAQVFSDPYSVVKELVDNGLDAGATSISVELSANTVGIIQVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGA-VSHLTLMSRPPQN 115 G+ + + +R CTSK+ DD N+ T GFRGEAL S + + ++ + Sbjct: 61 TGIHPNDRQLVCKRSCTSKLRTVDDLRNVGGSTLGFRGEALASAAEMCGGILVTTKTDEE 120 Query: 116 NTGAQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 GA + + S + GT V V + +P R K + + ++ Sbjct: 121 LVGAALKYDRAGLLISCTKSSHPTGTTVRVSEFLKFVPVRKQTALKCASKTISRLKKMLI 180 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE------- 226 A++ P++ + + + + I +G + ++ V + Sbjct: 181 AYALSRPEIRLSLQVLGGKNQSPWIYAPKKTISDAIMTAVGPEVVSQCVIVAWPESQDSE 240 Query: 227 -----------KSNEITLQGYTGIP----TFNRGNANQFYVFINGRTVQ-DKFILSTIRT 270 ++N ++++ +P ++ YV I+ R + I I Sbjct: 241 ASSSLGHRDDSETNPLSIRLVAVVPGPDADCSKLTRAGQYVSIDRRPMSTSHGIAKEIVK 300 Query: 271 AYAETIPLGR----------YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 + + G P + + L+ D NV P+K+ + F + ++ + Sbjct: 301 LFKSYLRSGSLCNGGLTSPVDPFLFIHLQCPLGSYDANVEPSKNDVLFADSKLVMSL 357 >gi|149566645|ref|XP_001516394.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 973 Score = 189 bits (480), Expect = 1e-45, Method: Composition-based stats. Identities = 94/396 (23%), Positives = 155/396 (39%), Gaps = 34/396 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L E + ++ +G I I+EL NS+DAE++ V + Q+ DNG G Sbjct: 2 IRHLPEGVRAKLRSGVAIASLGQCIEELALNSIDAEANCVAVRV-NVETFRVQVVDNGSG 60 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGA 119 M E++ A R+ TSK +D N +GFRGEAL SI A+++ + + S+ Sbjct: 61 MGKEDVRRAGDRYFTSKCGSVEDLENPKFYGFRGEALASIAALANAVEVSSKAGGTAKTF 120 Query: 120 QIAISGEK---ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 I K + V + GT V +LF+ +P R + S ++E I I ++ Sbjct: 121 LKLIHAGKALDVCEADSVRPSAGTTVTAYNLFYQLPVRRKGMDS-RLEFERIRRRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P VSF+ S + + R Q+ G ELN + +GY Sbjct: 180 LMHPSVSFSLKNEASGATVLQL-PKAKDVRARFCQIYGLGRAQKLKELNCQGGGFECRGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTI----RTAYAETIPLG------------- 279 G N N ++F+NGR V + I R P G Sbjct: 239 VGAE--AHYNRNMQFLFVNGRLVLRTRLHKLIDFLLRKESVICKPKGGPAGRPPSSSHPR 296 Query: 280 ------RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 R+ V V+ + + DV + PAK+ I FR+ + + + ++ + ++ + Sbjct: 297 PRSASERHGVYVVNVRCHVGEYDVCMEPAKTLIEFRDWDALLACVEEGVRALLKRERLFV 356 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKL 369 S L A+ +E Sbjct: 357 ESSGEDSRGGGEGNGLGFAAALRPAASGRGGGRESF 392 >gi|296811560|ref|XP_002846118.1| PMS1 nirs variant 6 [Arthroderma otae CBS 113480] gi|238843506|gb|EEQ33168.1| PMS1 nirs variant 6 [Arthroderma otae CBS 113480] Length = 752 Score = 189 bits (480), Expect = 1e-45, Method: Composition-based stats. Identities = 82/393 (20%), Positives = 141/393 (35%), Gaps = 69/393 (17%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L E I I + + PS KEL++N+LDA ++ + I+ Q+ DNG Sbjct: 1 MPIVALGESTIRAIGSASALPDPSSVAKELLDNALDAGATSIFVEISVNTLDIIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNI--HTFGFRGEALPSIGAVSH-LTLMSRPPQN 115 G+ + + +++ TSKI +D + I + GFRG+AL SI +S + + +R + Sbjct: 61 SGIQPADRSLVCKQNYTSKIQTKEDLNTINGKSLGFRGQALASIAKMSDAVYITTRVIEE 120 Query: 116 NTG-----------------------------AQIAISGEKISSVRPVA----MNPGTIV 142 + + + S GT V Sbjct: 121 QAARIIKFGRDGKPIRGIPVSGNVHELLSSQMWKYELPVGQRISYNISDTLASHPVGTTV 180 Query: 143 EVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK-SNRYKMNFQS 200 V ++P R K I +++R AIA PK F+F +K + + S Sbjct: 181 RVIGFLKSLPGRRQEAEKKSAKSAFNIKKLLQRYAIARPKTRFSFRLLKSKDNDWVYAPS 240 Query: 201 TNGNFPERISQVIGEDFINNAV------------------ELNEKSNEITLQGYTGIP-- 240 + + + ISQVI + + + E I + P Sbjct: 241 SEASVRDAISQVISPTVMTSCISRNLSYPIHEERNSPYTEEEVHDVCTIHISTIIPNPSA 300 Query: 241 -TFNRGNANQFYVFINGRTV-QDKFILSTIRTAYAETIPLG-------RYPVVVLLLEID 291 + + YV I+GR + K I + + P + L L+ Sbjct: 301 ECLSNVDYKGQYVVIDGRPILTSKGFGKEISRRFKTRLKQAIDESNVIADPFMFLSLDCP 360 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQK 324 P D+N+ P+K + F + +I I + Sbjct: 361 PGIYDINIEPSKDDVLFEDHPVILQIIETAFMD 393 >gi|222642049|gb|EEE70181.1| hypothetical protein OsJ_30259 [Oryza sativa Japonica Group] Length = 1166 Score = 189 bits (480), Expect = 1e-45, Method: Composition-based stats. Identities = 71/338 (21%), Positives = 145/338 (42%), Gaps = 28/338 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I++L + + + + + ++ S ++EL+ NS+DA +S+++ + + ++ D+G Sbjct: 3 TIKRLPKSVHSSLRSSIVLFDLSRVVEELVYNSIDANASKIDISV-NARACYVKVEDDGC 61 Query: 62 GMTSEEIPMAVQRHCTSKISD---DFS-NIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+T +E+ + +++ TSK + D + +FG GEAL S+ +S + + ++ Sbjct: 62 GITRDELVLVGEKYATSKFHNVMVDGEPSSRSFGLNGEALASLSDISVVEVRTKARGRPN 121 Query: 118 GAQIAISGEKISSVRPVAMNP--GTIVEVRDLFFTIPARL-NFLKSEQVETNLITDVIRR 174 I G K S + GT V VR+LF+ P R S + E +L+ + R Sbjct: 122 SYCKIIKGSKCSHLGIDEQREVVGTTVIVRELFYNQPVRRKQMQSSYKRELHLVKKSVLR 181 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 +A+ +P+VS I+S + ++ P +S ++G++ + E+ L Sbjct: 182 VALIHPQVSLRLFDIESEDELLYTIPSSSPLP-LVSNILGKNVSSCLHEIATSDKHFALS 240 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G+ PT D F I + YP +L L Sbjct: 241 GHISRPT-------------------DVFCNKEIDVRSKKRQKNEVYPAYLLNLCCPRSS 281 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 D++ P+++ + F++ + F ++I K Sbjct: 282 YDLHFEPSQTIVEFKDWQTVMYFFERTITDYWKKHAPQ 319 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 21/216 (9%) Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 E + ++ Q+ + +I + + L++VDQHAA ER+ E++R+ S T Sbjct: 913 ECIDKNCFEEARVLLQLDKKFIPVISGEVLLLVDQHAADERIRLEELRRKVLSDDGRGIT 972 Query: 457 LL-TPEIIDLLEGECALIMEHDEDLHRLGIKA------ERFGPNAIAIR---------EI 500 L + E + L E L ++ + + G E F N +R + Sbjct: 973 YLDSEEDLVLPETGFQLFQKYMQQIQSWGWIINSTNSCESFKKNMNVLRRQSRRLTLAAV 1032 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 P IL + L D I ++ D+ + + + IL AC G+I G + E + + Sbjct: 1033 PCILGVTLTGKDLMDFIQQLDDTDGSSAIPPAVIRILNFKACRGAIMFGDPLLPSECSLI 1092 Query: 561 LREMEKNPNSSQCNHGRPTFIKL----KLS-DIEKL 591 + E++ QC HGRPT + + L ++ +L Sbjct: 1093 IEELKATSLCFQCAHGRPTTVPIVNVASLRGELARL 1128 >gi|58697600|ref|ZP_00372810.1| DNA mismatch repair protein MutL-1 [Wolbachia endosymbiont of Drosophila simulans] gi|58535895|gb|EAL59672.1| DNA mismatch repair protein MutL-1 [Wolbachia endosymbiont of Drosophila simulans] Length = 187 Score = 189 bits (479), Expect = 2e-45, Method: Composition-based stats. Identities = 87/189 (46%), Positives = 127/189 (67%), Gaps = 4/189 (2%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL- 465 G A Q++ YII++ D L+IVDQHAAHERL++E ++ + I Q LL PE +++ Sbjct: 1 GFARCQVYNTYIIAEVRDKLIIVDQHAAHERLVYECLK---QKSSIKRQKLLLPETVEIK 57 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 + +I + + L +G E N + ++EIPAIL ++ ++L +IID + + Sbjct: 58 NQAGMEMIEIYKDKLFEMGFDIEIKSENKVIVKEIPAILGAIDVKEMLINIIDRLTEIED 117 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 T ++D++ ILAT+AC+GSIR+GRKM+ EMN LLR+MEK P S QCNHGRPT+I++KL Sbjct: 118 TLPVEDKVNKILATIACHGSIRAGRKMRLDEMNELLRQMEKTPYSGQCNHGRPTYIEMKL 177 Query: 586 SDIEKLFGR 594 SDIEKLF R Sbjct: 178 SDIEKLFER 186 >gi|218202592|gb|EEC85019.1| hypothetical protein OsI_32312 [Oryza sativa Indica Group] Length = 1167 Score = 189 bits (479), Expect = 2e-45, Method: Composition-based stats. Identities = 70/338 (20%), Positives = 144/338 (42%), Gaps = 28/338 (8%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I++L + + + + + ++ S ++EL+ NS+DA +S+++ + + ++ D+G Sbjct: 3 TIKRLPKSVHSSLRSSIVLFDLSRVVEELVYNSIDANASKIDISV-NARACYVKVEDDGC 61 Query: 62 GMTSEEIPMAVQRHCTSKISD---DFS-NIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+T +E+ + +++ TSK + D + +FG GEAL S+ +S + + ++ Sbjct: 62 GITRDELVLVGEKYATSKFHNVMVDGEPSSRSFGLNGEALASLSDISVVEVRTKARGRPN 121 Query: 118 GAQIAISGEKISSVRPVAMNP--GTIVEVRDLFFTIPARL-NFLKSEQVETNLITDVIRR 174 I G K S + GT V VR+LF+ P R S + E +L+ + R Sbjct: 122 SYCKIIKGSKCSHLGIDEQREVVGTTVIVRELFYNQPVRRKQMQSSYKRELHLVKKSVLR 181 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 +A+ +P+VS I+S + ++ +S ++G++ + E+ L Sbjct: 182 VALIHPQVSLRLFDIESEDELLYTIPSSSPL-TLVSNILGKNVSSCLHEIATSDKHFALS 240 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G+ PT D F I + YP +L L Sbjct: 241 GHISRPT-------------------DVFCNKEIDVRSKKRQKNEVYPAYLLNLCCPRSS 281 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 D++ P+++ + F++ + F ++I K Sbjct: 282 YDLHFEPSQTIVEFKDWQTVMYFFERTITDYWKKHAPQ 319 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 21/216 (9%) Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQT 456 E + ++ Q+ + +I + + L++VDQHAA ER+ E++R+ S T Sbjct: 914 ECIDKNCFEEARVLLQLDKKFIPVISGEVLLLVDQHAADERIRLEELRRKVLSDDGRGIT 973 Query: 457 LL-TPEIIDLLEGECALIMEHDEDLHRLGIKA------ERFGPNAIAIR---------EI 500 L + E + L E L ++ + + G E F N +R + Sbjct: 974 YLDSEEDLVLPETGFQLFQKYMQQIQSWGWIINSTNSCESFKKNMNVLRRQSRRLTLAAV 1033 Query: 501 PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 P IL + L D I ++ D+ + + + IL AC G+I G + E + + Sbjct: 1034 PCILGVTLTGKDLMDFIQQLDDTDGSSAIPPAVIRILNFKACRGAIMFGDPLLPSECSLI 1093 Query: 561 LREMEKNPNSSQCNHGRPTFIKL----KLS-DIEKL 591 + E++ QC HGRPT + + L ++ +L Sbjct: 1094 IEELKATSLCFQCAHGRPTTVPIVNVASLRGELARL 1129 >gi|332527056|ref|ZP_08403138.1| DNA mismatch repair protein MutL [Rubrivivax benzoatilyticus JA2] gi|332111488|gb|EGJ11471.1| DNA mismatch repair protein MutL [Rubrivivax benzoatilyticus JA2] Length = 217 Score = 189 bits (479), Expect = 2e-45, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 112/200 (56%), Gaps = 1/200 (0%) Query: 396 VEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK-ITS 454 + E+ + LG A Q+ Y++++ GLV+VD HAAHER+++E+++Q +S + + Sbjct: 16 LPEAAPAAHPLGEAIGQVGGVYVLARNAHGLVVVDMHAAHERIVYERLKQAASSAAALPA 75 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL P E A + L LG+ + + +R PA L ++ +L R Sbjct: 76 QPLLLPVSFAATAAEVATAEAERDSLLALGLDVAPLSASTLVVRSRPAALPDADVAELAR 135 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 ++ E + + ++ + +LATMAC+G++R+ R++ EM+ LLR+ME + CN Sbjct: 136 SVLAEFEQTGASRAVERSRDELLATMACHGAVRANRRLTLPEMDALLRQMEATERADTCN 195 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRPT+ +L + +++ LF R Sbjct: 196 HGRPTWRQLTMKELDALFLR 215 >gi|324548372|gb|ADY49736.1| DNA mismatch repair protein mutL [Ascaris suum] Length = 109 Score = 188 bits (478), Expect = 2e-45, Method: Composition-based stats. Identities = 53/106 (50%), Positives = 74/106 (69%), Gaps = 2/106 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + E + N IAAGE++ERP IKEL+ENS+DA++S++ + G S ++DNG G Sbjct: 4 IKVMDESLANLIAAGEVVERPFSVIKELVENSIDAQASKINIELKDSGISQIIVSDNGIG 63 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHL 106 + E+IP+ +RH TSKIS+ D +NI T GFRGEAL SI AVS + Sbjct: 64 VEKEDIPLMCKRHATSKISNNIDLANITTLGFRGEALASISAVSKV 109 >gi|315050860|ref|XP_003174804.1| DNA mismatch repair protein pms1 [Arthroderma gypseum CBS 118893] gi|311340119|gb|EFQ99321.1| DNA mismatch repair protein pms1 [Arthroderma gypseum CBS 118893] Length = 1039 Score = 188 bits (477), Expect = 3e-45, Method: Composition-based stats. Identities = 86/425 (20%), Positives = 154/425 (36%), Gaps = 49/425 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I G ++ DNG Sbjct: 3 TIKPIEARSVHQIQSGQVIVDLY-------------------VRFKNNGLDLIEVQDNGH 43 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G++ +H TSK+S D +++ TFGFRGEAL S+ AVS+LT+++ Q A Sbjct: 44 GISPNNYESLALKHYTSKLSTFADLTSLQTFGFRGEALSSLCAVSNLTVVTAEAQQAPRA 103 Query: 120 Q--IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 ++ S + VA GT V + +LF +P R K+ + E + ++ A Sbjct: 104 SKLDFEFSGRLKSTQVVAGQRGTTVSIENLFKPLPVRRRELEKNVKREYGKVIALLHAYA 163 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVE----------- 223 V F + +T N E IS V G + + Sbjct: 164 CISTGVRFNVKNQMPKGKSVVVFTTKSNPTTRENISNVYGAKTLLALMPLDLNLEFEPSS 223 Query: 224 -----LNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 + SN++ + G+ P F R ++ F+N R I Y Sbjct: 224 AAKRFSSNVSNKLFVHGHISKPIFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYKSF- 282 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 L + P + E+D DVNV P K I + + + + ++ + + Sbjct: 283 NLSQSPFIFANFEMDTSAYDVNVSPDKRTILLHDAGALIESL----KASLTELFENQDQT 338 Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPV 396 + ++ Q S TQ++L + + L +D D +P Sbjct: 339 VPVSQLAFSRQSQLTPKTGKTPLASTNATQDELEEPSANAAYSQELGENDTVQDNDLEPT 398 Query: 397 EESEA 401 + ++ Sbjct: 399 TKPQS 403 Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 76/203 (37%), Gaps = 47/203 (23%) Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR 482 D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I+++ L + Sbjct: 800 QDELFIIDQHASDEKYNFERLQ---AETTVQNQRLVKPKTLDLTSVEEEVIIDNLAALEK 856 Query: 483 LGIKAE-------RFGPNAIAIREIP----AILSKKNIPQLLRDIIDEIIDSSTTY---- 527 G E G I +P + +++ +L+ ++ E S Sbjct: 857 NGFIVEIDTSGDEPIGRRCKLI-SLPLSKEVVFDTRDLEELIV-LLSEAPQQSQNNRGKR 914 Query: 528 ---------------------------TLQDRIENILATMACYGSIRSGRKMQSIEMNRL 560 ++ + A AC SI G+ + +M + Sbjct: 915 SRNELDSDAEDVEPSGIASSPFSDYLVPRPSKVRKMFAMRACRSSIMIGKNLTHRQMETV 974 Query: 561 LREMEKNPNSSQCNHGRPTFIKL 583 ++ M C HGRPT L Sbjct: 975 VKHMGTIDKPWNCPHGRPTMRHL 997 >gi|47230202|emb|CAG10616.1| unnamed protein product [Tetraodon nigroviridis] Length = 359 Score = 188 bits (477), Expect = 3e-45, Method: Composition-based stats. Identities = 70/355 (19%), Positives = 145/355 (40%), Gaps = 31/355 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L ++ ++ +G I ++ELI NS+DAE++ V + Q+ DNG G Sbjct: 1 IKCLPTEVQGKLRSGVAIPSLQQCVEELILNSIDAEATCVGVRMDLEAFK-VQVLDNGTG 59 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHL-TLMSRPPQNNTGA 119 M ++ + R+ TSK +D N+ +GFRGEAL S+ +++ L + SR + Sbjct: 60 MDADNLERLGNRYHTSKCRRVEDLENLRWYGFRGEALASLVSLATLVEVSSRTKSSLKTY 119 Query: 120 QIAISGEK---ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + + GT V + + F +P R L+ +E + + ++ Sbjct: 120 VKVFKDGKGMAVFEAENPRPSAGTTVVICNFFHNMPVRRKRLEPV-LEGERVRHRVEAIS 178 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P VSFT + + + R Q+ N E+N + ++ GY Sbjct: 179 LMHPSVSFTLKNDCTAAM-LVQLPKANSIYHRFVQIHSLSRAQNLGEINFTHQQFSVVGY 237 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR---------------- 280 G ++++N R + + I + + + Sbjct: 238 VGREGHYNNC--LQFLYVNERLLLKTRVHKLINCLLRKPSSINQKNDSPERSVGSPKHKR 295 Query: 281 ----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 + V +L ++ + DV + PAK+ I F++ + + ++++ + ++ + Sbjct: 296 SQDLHGVYILNIKCCYSEYDVCLEPAKTLIEFKDWDGVMACVEEAVKTFLKRENL 350 >gi|189203485|ref|XP_001938078.1| DNA mismatch repair protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985177|gb|EDU50665.1| DNA mismatch repair protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 729 Score = 188 bits (477), Expect = 3e-45, Method: Composition-based stats. Identities = 85/408 (20%), Positives = 156/408 (38%), Gaps = 29/408 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L QI +G+++ S ++ELI+N+LDA + + I Q+ D+G G Sbjct: 13 IAALPPTTTRQIGSGQVLVDTSPVVQELIDNALDARAKSMFVDITPNTIDPIQVKDDGHG 72 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNI--HTFGFRGEALPSIGAVS-HLTLMSRPPQNNT 117 + +E+ P+ +R+CTSKI D D N+ GFRGEAL S+ +S L + +R Sbjct: 73 IPAEDRPLVCRRYCTSKIRDFHDLRNVGGKWLGFRGEALSSMAEMSASLDVTTRVEGELV 132 Query: 118 GAQI-AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRRM 175 + +++S + GT V+V F IP R K+ I +++ Sbjct: 133 AVKTKYNRNGELASTVHDSHPVGTTVKVTKFFDYIPVRKQTALKNSSRCLAKIRRLMQAY 192 Query: 176 AIAYPKVSFTFSTI---KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 A+A P F + SN + N N + +V+ ++ +++ Sbjct: 193 ALARPTTRFRLHVLKAKNSNSDFVYAPKANANIEDAALKVVDKECALQCEWTAMEADGFE 252 Query: 233 LQGYTGIPTFNRGNANQFYVF--INGRT-VQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 + + PT N + F ++GR + + I A+ E + Sbjct: 253 VHAFLPKPTANGLKISGQGAFVSVDGRPLSNSRGTIKQIVMAFKELLRKSN--------- 303 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDN 349 PAK + F N ++ + + + + + S M + H D Sbjct: 304 ------SSLAEPAKDDVMFENSEVVLG-VFDRLLTSYYPEAVDNVSEEEPPMSAQQHLDP 356 Query: 350 APKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 +P+ TS+ + + ++ + Y D D +E Sbjct: 357 SPEALQRSDRTSIAAKEYAIQGPDDGPKSRAQPRWRSTMYGIDEDDME 404 >gi|124249062|ref|NP_780546.1| DNA mismatch repair protein Mlh3 [Mus musculus] gi|51259774|gb|AAH79861.1| MutL homolog 3 (E coli) [Mus musculus] Length = 1411 Score = 187 bits (476), Expect = 4e-45, Method: Composition-based stats. Identities = 76/354 (21%), Positives = 140/354 (39%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR LS+ + ++ +G I ++EL NS+DAE++ V + Q+ DNG G Sbjct: 2 IRCLSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEATCVAIRV-NMETFQVQVIDNGLG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGA 119 M +++ R+ TSK D N +GFRGEAL SI ++ + + S+ Sbjct: 61 MAGDDVEKVGNRYFTSKCHSVRDLENPAFYGFRGEALASIADMAGAVEISSKKNTTLKTF 120 Query: 120 QIAISGEKISSVRPVAMNP---GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + + GT V V +LF+ P R + ++E + + ++ Sbjct: 121 VKMFQNGKALATHEADLTRPSVGTTVTVYNLFYQFPVRRKSMD-PRLEFEKVRQRVEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E+ K E GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEFSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIR-----------------TAYAETIPLG 279 N N ++F+N R V + I + + P Sbjct: 239 ISSE--AHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSSPRH 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 R + + V+ ++ + DV + PAK+ I F++ + I + +++ + + Sbjct: 297 RSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQSWDTVLICIQEGVKRFLKQ 350 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S T++ P I + E + L+ + Sbjct: 1181 LVLVDQHAAHERIRLEQLITDSYEKQDPQSAGRKKLLSSTIIPPLAITVSEEQRRLLRSY 1240 Query: 477 DEDLHRLGIK--AERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 + L LG++ + I + ++P ++ + +L+R+ ++ Sbjct: 1241 HKHLEDLGLELLFPDASDSLILVGKVPLCFVEREASELRRGRSTVTKSIVEELIREQVEL 1300 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ ++ E RL+ + + QC HGRP Sbjct: 1301 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDRLSLEESCRLIEALSLSQLPFQCAHGRP 1360 Query: 579 TFIKLKLSDIEKL 591 + + L +D++ L Sbjct: 1361 SMLPL--ADLDHL 1371 >gi|224166782|ref|XP_002188747.1| PREDICTED: similar to mutL homolog 3, partial [Taeniopygia guttata] Length = 1094 Score = 187 bits (475), Expect = 4e-45, Method: Composition-based stats. Identities = 81/358 (22%), Positives = 148/358 (41%), Gaps = 34/358 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E + ++ + + ++EL+ NS+DA+++ V + Q+ DNG G Sbjct: 2 IRRLVEDVRARLRSEVTVNSLGHCVEELVLNSIDAKATCVAIRVDLEAFK-IQVVDNGSG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M E++ +R+ TSK S D N+ +GFRGEAL SI V S + + S+ + Sbjct: 61 MGKEDLRAVGKRYFTSKCSSVRDLENLTFYGFRGEALASIANVASVVEISSKTSRTAKTF 120 Query: 120 QIAISGEKISSVRPVAMNP---GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 + V +N GT V V +LF +P R + +E + + ++ Sbjct: 121 MKLFHNGQALEVCEAELNRPSGGTTVTVCNLFHQLPVRRKCMDPV-LEIERVRQKVEAVS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P VS + S + T + R Q+ G E+N KS + G+ Sbjct: 180 LMHPSVSLSLRNDVSCSMVLQLPKTR-DVYSRFCQIYGLGRSQKLREINHKSGGFEISGF 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRT--------AYAETIPLGR-------- 280 N N ++++N R V + I A+++P R Sbjct: 239 ISTE--GHYNKNMQFLYVNRRLVLKTRLHKLIDFLLRKESVICKAKSVPANRQANSSPGR 296 Query: 281 -------YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 Y + +L + DV + PAK+ I F+N ++ I + ++ + ++ + Sbjct: 297 YRSGPELYGIFILNVTCAHSDYDVCLEPAKTLIEFQNWDVLLTCIEEGVKIFLKREHL 354 >gi|332967579|gb|EGK06724.1| DNA mismatch repair protein HexB [Desmospora sp. 8437] Length = 192 Score = 187 bits (475), Expect = 4e-45, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 1/191 (0%) Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 QIH YII+Q DG ++DQHAAHER+ +E+ Q LL P + Sbjct: 1 MPDLTPLTQIHGTYIIAQAEDGFYLMDQHAAHERIYYERFYSRMQEGDGRLQALLMPLTV 60 Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 + E +I + L LG++ E FG A +R P K + +LL +++D + Sbjct: 61 ECTPAEAEVIRQWVPHLSELGMEMEPFGNTAFLVRSHPVWFPKGSEEELLWEVLDWVK-R 119 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ MAC +I++ R ++ EM L++++ C HGRP I Sbjct: 120 GERVDPARLQDDGAKLMACKAAIKANRHLRREEMESLIQQLRACITPYTCPHGRPILIHF 179 Query: 584 KLSDIEKLFGR 594 +IEK+F R Sbjct: 180 STYEIEKMFKR 190 >gi|148670913|gb|EDL02860.1| mCG5531, isoform CRA_b [Mus musculus] Length = 1443 Score = 187 bits (475), Expect = 4e-45, Method: Composition-based stats. Identities = 76/354 (21%), Positives = 140/354 (39%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR LS+ + ++ +G I ++EL NS+DAE++ V + Q+ DNG G Sbjct: 2 IRCLSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEATCVAIRV-NMETFQVQVIDNGLG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGA 119 M +++ R+ TSK D N +GFRGEAL SI ++ + + S+ Sbjct: 61 MAGDDVEKVGNRYFTSKCHSVRDLENPAFYGFRGEALASIADMAGAVEISSKKNTTLKTF 120 Query: 120 QIAISGEKISSVRPVAMNP---GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + + GT V V +LF+ P R + ++E + + ++ Sbjct: 121 VKMFQNGKALATHEADLTRPSVGTTVTVYNLFYQFPVRRKSMD-PRLEFEKVRQRVEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E+ K E GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEFSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIR-----------------TAYAETIPLG 279 N N ++F+N R V + I + + P Sbjct: 239 ISSE--AHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSSPRH 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 R + + V+ ++ + DV + PAK+ I F++ + I + +++ + + Sbjct: 297 RSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQSWDTVLICIQEGVKRFLKQ 350 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S T++ P I + E + L+ + Sbjct: 1213 LVLVDQHAAHERIRLEQLITDSYEKQDPQSAGRKKLLSSTIIPPLAITVSEEQRRLLRSY 1272 Query: 477 DEDLHRLGIK--AERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 + L LG++ + I + ++P ++ + +L+R+ ++ Sbjct: 1273 HKHLEDLGLELLFPDASDSLILVGKVPLCFVEREASELRRGRSTVTKSIVEELIREQVEL 1332 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ ++ E RL+ + + QC HGRP Sbjct: 1333 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDRLSLEESCRLIEALSLSQLPFQCAHGRP 1392 Query: 579 TFIKLKLSDIEKL 591 + + L +D++ L Sbjct: 1393 SMLPL--ADLDHL 1403 >gi|294909575|ref|XP_002777799.1| DNA mismatch repair protein PMS1, putative [Perkinsus marinus ATCC 50983] gi|239885761|gb|EER09594.1| DNA mismatch repair protein PMS1, putative [Perkinsus marinus ATCC 50983] Length = 925 Score = 187 bits (475), Expect = 5e-45, Method: Composition-based stats. Identities = 75/406 (18%), Positives = 156/406 (38%), Gaps = 31/406 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L+ +++ I A +++ S +KEL+ENSLDA + + + G ++D+G G Sbjct: 13 ITSLTRDVVDSICAAQVVTSLSQCVKELLENSLDAGARNITVTLVNNGVDMIAVSDDGCG 72 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHT---------FGFRGEALPSIGAVSH--LTLMSR 111 ++ E H TSK+ D T FGFRGEAL ++ +S+ +T+++R Sbjct: 73 VSEENWSTLCSWHATSKV--DIVESRTDELRLGYSDFGFRGEALAAMCGLSNGGVTVLTR 130 Query: 112 PPQNNTGAQIAISGEKISSVRPVAMNP----GTIVEVRDLFFTIPAR-LNFLKSEQVETN 166 + + + +K + GT V +R LF +P R F ++ + + Sbjct: 131 TEDSKSETGKVLVYDKTGRLSSSDGEAARGVGTTVTIRGLFRGLPVRLREFERNAKKQVT 190 Query: 167 LITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN-AVELN 225 +++ A+ V+F + + N + ++ + + + + L Sbjct: 191 ATVGLMQAYAVIRHDVAFRLTCDGRSLLATNPEDDMETAIRKVCCISAAELASMTRLVLE 250 Query: 226 EKSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFI-LSTIRTAYAETIPL---- 278 ++ +L+G PT + ++++ GR V I Y Sbjct: 251 DEGGRWSLKGCLSPPTSVLRPGVVHAQWLYVGGRPVDMPTRVSRCINQLYKRFQTTVALE 310 Query: 279 ---GRYPVVVLLLEIDP--RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 GR + VL + DVN K + T + + I +++++ + T Sbjct: 311 RKSGRTWLAVLSIVFGEGVDAADVNSSKDKRSVILDFETELCDKITEAVEEEWSSASSQT 370 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTN 379 + + + D + + + T +E+ E + + Sbjct: 371 AVQVKTSSLQQRRMDGWLRKEENITSKTSTKREEQWTPGEPQKQQS 416 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 90/239 (37%), Gaps = 36/239 (15%) Query: 377 STNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG-LVIVDQHAAH 435 S+ + +++ + + ++ Q ++ +II+ L I+DQHA Sbjct: 662 SSQEDSGNEEFDEGTNATFHVKLGKEDFEAMRVIGQFNKGFIITALEGRWLFILDQHACD 721 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA- 494 E+ IFE + ++++ SQ ++ P + L + I ++ G + F +A Sbjct: 722 EKTIFETL---NKTSELKSQPMIVPVRLSLPPPLESCIRGSRREIEACGFRF-NFADDAP 777 Query: 495 ----IAIRE--IPAILS----KKNIPQLLRDIIDEIIDSSTTYT---------------- 528 + + + + L + + D+ ++D T Sbjct: 778 IGSRVQLTSLGVASGLGFERSRPLTKEDFVDLASLLLDRGATGRSDDELPSASLFWSSAL 837 Query: 529 ----LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R+ ++LA+ AC +I G + +M ++R+M C HGRPT L Sbjct: 838 GHCLRPPRVWSMLASRACRTAIMIGDSLSRKKMEGVVRKMAALNQPWNCPHGRPTMRLL 896 >gi|294909571|ref|XP_002777798.1| DNA mismatch repair protein PMS1, putative [Perkinsus marinus ATCC 50983] gi|239885760|gb|EER09593.1| DNA mismatch repair protein PMS1, putative [Perkinsus marinus ATCC 50983] Length = 871 Score = 187 bits (475), Expect = 5e-45, Method: Composition-based stats. Identities = 75/406 (18%), Positives = 156/406 (38%), Gaps = 31/406 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L+ +++ I A +++ S +KEL+ENSLDA + + + G ++D+G G Sbjct: 13 ITSLTRDVVDSICAAQVVTSLSQCVKELLENSLDAGARNITVTLVNNGVDMIAVSDDGCG 72 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHT---------FGFRGEALPSIGAVSH--LTLMSR 111 ++ E H TSK+ D T FGFRGEAL ++ +S+ +T+++R Sbjct: 73 VSEENWSTLCSWHATSKV--DIVESRTDELRLGYSDFGFRGEALAAMCGLSNGGVTVLTR 130 Query: 112 PPQNNTGAQIAISGEKISSVRPVAMNP----GTIVEVRDLFFTIPAR-LNFLKSEQVETN 166 + + + +K + GT V +R LF +P R F ++ + + Sbjct: 131 TEDSKSETGKVLVYDKTGRLSSSDGEAARGVGTTVTIRGLFRGLPVRLREFERNAKKQVT 190 Query: 167 LITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN-AVELN 225 +++ A+ V+F + + N + ++ + + + + L Sbjct: 191 ATVGLMQAYAVIRHDVAFRLTCDGRSLLATNPEDDMETAIRKVCCISAAELASMTRLVLE 250 Query: 226 EKSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFI-LSTIRTAYAETIPL---- 278 ++ +L+G PT + ++++ GR V I Y Sbjct: 251 DEGGRWSLKGCLSPPTSVLRPGVVHAQWLYVGGRPVDMPTRVSRCINQLYKRFQTTVALE 310 Query: 279 ---GRYPVVVLLLEIDP--RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 GR + VL + DVN K + T + + I +++++ + T Sbjct: 311 RKSGRTWLAVLSIVFGEGVDAADVNSSKDKRSVILDFETELCDKITEAVEEEWSSASSQT 370 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTN 379 + + + D + + + T +E+ E + + Sbjct: 371 AVQVKTSSLQQRRMDGWLRKEENITSKTSTKREEQWTPGEPQKQQS 416 Score = 41.6 bits (96), Expect = 0.44, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 66/173 (38%), Gaps = 16/173 (9%) Query: 377 STNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG-LVIVDQHAAH 435 S+ + +++ + + ++ Q ++ +II+ L I+DQHA Sbjct: 662 SSQEDSGNEEFDEGTNATFHVKLGKEDFEAMRVIGQFNKGFIITALEGRWLFILDQHACD 721 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA- 494 E+ IFE + ++++ SQ ++ P + L + I ++ G + F +A Sbjct: 722 EKTIFETL---NKTSELKSQPMIVPVRLSLPPPLESCIRGSRREIEACGFRF-NFADDAP 777 Query: 495 ----IAIRE--IPAILS----KKNIPQLLRDIIDEIIDSSTTYTLQDRIENIL 537 + + + + L + + D+ ++D T D + L Sbjct: 778 IGSRVQLTSLGVASGLGFERSRPLTKEDFVDLASLLLDRGATGRSDDERRHRL 830 >gi|167949577|ref|ZP_02536651.1| DNA mismatch repair protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 311 Score = 187 bits (475), Expect = 5e-45, Method: Composition-based stats. Identities = 88/293 (30%), Positives = 150/293 (51%), Gaps = 4/293 (1%) Query: 249 QFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRF 308 + ++N R V+DK + IR A+ + + GR+P VL LEIDP +VDVNVHP K +RF Sbjct: 1 MQFFYVNNRMVRDKLVTHAIRQAFQDVLYHGRHPAYVLFLEIDPSKVDVNVHPTKHEVRF 60 Query: 309 RNPTIIRNFIIQSIQKAINKK---GISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNT 365 R ++ +F+ + + A+++ G S + + ++ A + T Sbjct: 61 REGRLVHDFLFRGLHHALSETRPGGGQPSPEEMQTPLPEAPREPALEQQRLTMDTPSAAA 120 Query: 366 QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG 425 + + R S+ E++A LG A AQ+ YI+++ G Sbjct: 121 ASTAWRVQERPSSYQASFRAQQPAQSPGPAAGENDA-SQPLGYALAQVGGVYILAENQQG 179 Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 LV+VD HAAHER+ +E+ ++ + +T Q LL P ++L E L H E L +GI Sbjct: 180 LVLVDMHAAHERITYERFKRSYAGQGVTGQPLLVPISLNLSSREVDLAEAHSELLREVGI 239 Query: 486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILA 538 + R G ++A+R IPA+L + QL+RD+I ++++ + +Q+ I+ +LA Sbjct: 240 ELSRLGKESLAVRGIPALLQGADAEQLVRDVITDLVEFGESRRVQEEIDKMLA 292 >gi|149025196|gb|EDL81563.1| mutL homolog 3 (E. coli) (predicted), isoform CRA_b [Rattus norvegicus] Length = 1233 Score = 187 bits (474), Expect = 5e-45, Method: Composition-based stats. Identities = 79/354 (22%), Positives = 143/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR LS+++ ++ +G + ++EL NS+DAE++ V + Q+ DNG G Sbjct: 2 IRCLSDEVQAKLRSGLALSSLGQCVEELTLNSIDAEATCVAIRV-NMETFQVQVIDNGLG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M +++ R+ TSK D N +GFRGEAL SI + S + + S+ Sbjct: 61 MAGDDVEKVGNRYFTSKCHSVRDLENPTFYGFRGEALASIADMASAVEISSKKSTTLKTF 120 Query: 120 QIAISGEKISSVRPVAMNP---GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + R + GT V V +LF+ P R + ++E + + ++ Sbjct: 121 VKMFQNGKALAAREADLTRPSVGTTVTVYNLFYQFPVRRKSMD-PRLEFEKVRQRVEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E GY Sbjct: 180 LMHPSISFSLRNDVSGSMILQL-PKTKDICSRFCQIYGLGKSQKLREIHYKYKEFEFNGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIR-----------------TAYAETIPLG 279 N N ++F+N R V + I + + P Sbjct: 239 ISSE--AHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSSPRH 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 R + + V+ ++ + DV + PAK+ I F+N + + + I+K + + Sbjct: 297 RSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQNWDTVLICVQEGIKKFLKQ 350 >gi|157822465|ref|NP_001101513.1| DNA mismatch repair protein Mlh3 [Rattus norvegicus] gi|149025195|gb|EDL81562.1| mutL homolog 3 (E. coli) (predicted), isoform CRA_a [Rattus norvegicus] Length = 1442 Score = 187 bits (474), Expect = 5e-45, Method: Composition-based stats. Identities = 79/354 (22%), Positives = 143/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR LS+++ ++ +G + ++EL NS+DAE++ V + Q+ DNG G Sbjct: 2 IRCLSDEVQAKLRSGLALSSLGQCVEELTLNSIDAEATCVAIRV-NMETFQVQVIDNGLG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M +++ R+ TSK D N +GFRGEAL SI + S + + S+ Sbjct: 61 MAGDDVEKVGNRYFTSKCHSVRDLENPTFYGFRGEALASIADMASAVEISSKKSTTLKTF 120 Query: 120 QIAISGEKISSVRPVAMNP---GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + R + GT V V +LF+ P R + ++E + + ++ Sbjct: 121 VKMFQNGKALAAREADLTRPSVGTTVTVYNLFYQFPVRRKSMD-PRLEFEKVRQRVEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E GY Sbjct: 180 LMHPSISFSLRNDVSGSMILQL-PKTKDICSRFCQIYGLGKSQKLREIHYKYKEFEFNGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIR-----------------TAYAETIPLG 279 N N ++F+N R V + I + + P Sbjct: 239 ISSE--AHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSSPRH 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 R + + V+ ++ + DV + PAK+ I F+N + + + I+K + + Sbjct: 297 RSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQNWDTVLICVQEGIKKFLKQ 350 Score = 127 bits (319), Expect = 5e-27, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S T++ P I + E + L+ + Sbjct: 1207 LVLVDQHAAHERVRLEQLITDSYEKQAPQSAGRKKLLSSTIIPPLAITVSEEQRRLLRSY 1266 Query: 477 DEDLHRLGIK--AERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 + L LG++ ++I + ++P ++ + +L+R+ ++ Sbjct: 1267 HKHLEDLGLELLFPDASDSSILVGKVPLCFVEREANELRRGRSPVTKSIVEELIREQLEL 1326 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ ++ E RL+ + QC HGRP Sbjct: 1327 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDRLSLEESCRLIEALSLCQLPFQCAHGRP 1386 Query: 579 TFIKLKLSDIEKL 591 + + L +D++ L Sbjct: 1387 SMLPL--ADLDHL 1397 >gi|323448291|gb|EGB04191.1| hypothetical protein AURANDRAFT_72554 [Aureococcus anophagefferens] Length = 649 Score = 187 bits (474), Expect = 6e-45, Method: Composition-based stats. Identities = 99/549 (18%), Positives = 185/549 (33%), Gaps = 51/549 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGF 61 I K+ ++++G+++ + A+KEL+EN+LDA ++ +E I GG + + DNG Sbjct: 5 IAKIDTASARKLSSGQVVVDLAGAVKELLENALDAGATSIELRINDDGGGAEIECADNGH 64 Query: 62 G--------------------MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 G + + + R TSK+ ++ + +FGFRGEAL S Sbjct: 65 GIAHRVESISELRQRSQVKICIAPRDFALVAARSATSKLVNFEELRTVQSFGFRGEALAS 124 Query: 100 IGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNP-GTIVEVRDLFFTIPARLNF 157 + ++ + +++R + GA+++ + I GT V VR LF P R Sbjct: 125 LRELAGEVLVVTRTSADAVGARLSFQRDGILKSSTPHARSVGTTVTVRGLFDCAPVRRAD 184 Query: 158 -LKSEQVETNLITDVIRRMAIAYPKVSFTFSTI---KSNRYKMNFQSTNGNFPERISQVI 213 + + + ++ A+ + + + R + E S + Sbjct: 185 LARRWKWHVSRALRTVQAHALVAVGCRLRLTLVSGGGATRRTAIAVQAPRSLRESASALF 244 Query: 214 GEDFINNAVELNE-----KSNEITLQGYTGI------PTFNRGNANQFYVFINGRTVQDK 262 G F + E++ + + + G P G ++ ++F+NGR + Sbjct: 245 GHAFARSLEEVSFDLRGGEDCSLAVIGLMSRAGGFDAPGPRGGGGDRQFLFVNGRPIDAP 304 Query: 263 FILSTIRTAYAETIPLGR-YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 + I + R P VL + + P VDVNV P K + + T + + Sbjct: 305 RVSRCIGDVWRSVEGDRRGRPAFVLDIRVPPSAVDVNVSPDKRDVVLDDETGRGAVPLPA 364 Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 + L + SF + H+ T T L L S Sbjct: 365 TSNLLVAALRIALHDLWEPSRGSFAGGRSLAPHVAPSTTPDTEAPCSLVLPIAVPSCVTS 424 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH------AAH 435 + + + V Q + Q +S +D + H Sbjct: 425 TATATNAPAREAMLVVPPTLRPTQRNSDTIAVAQVIALSPWQAARAHIDWNCAVAPARLH 484 Query: 436 ERLIFEKM--RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHR--LGIKAERFG 491 +F + + T Q P E L + LG R G Sbjct: 485 ASSVFGTLAVQSRCGHGHRTVQIDRRPGGNVPTAALAKADFSAMEALGQFNLGFLVCRLG 544 Query: 492 PNAIAIREI 500 + + + Sbjct: 545 DHLFLVDQH 553 Score = 39.3 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 3/85 (3%) Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 + A Q + +++ + D L +VDQHAA E+ +E + + T++ +Q LL P Sbjct: 524 DFSAMEALGQFNLGFLVCRLGDHLFLVDQHAADEKFRYEAL---WRDTRVDTQPLLAPLS 580 Query: 463 IDLLEGECALIMEHDEDLHRLGIKA 487 +DL E ++E + R+G + Sbjct: 581 LDLGATEELALLERRCTVERVGFRL 605 >gi|26330996|dbj|BAC29228.1| unnamed protein product [Mus musculus] Length = 434 Score = 187 bits (474), Expect = 6e-45, Method: Composition-based stats. Identities = 76/354 (21%), Positives = 140/354 (39%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR LS+ + ++ +G I ++EL NS+DAE++ V + Q+ DNG G Sbjct: 2 IRCLSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEATCVAIRV-NMETFQVQVIDNGLG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGA 119 M +++ R+ TSK D N +GFRGEAL SI ++ + + S+ Sbjct: 61 MAGDDVEKVGNRYFTSKCHSVRDLENPAFYGFRGEALASIADMAGAVEISSKKNTTLKTF 120 Query: 120 QIAISGEKISSVRPVAMNP---GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + + GT V V +LF+ P R + ++E + + ++ Sbjct: 121 VKMFQNGKALATHEADLTRPSVGTTVTVYNLFYQFPVRRKSMD-PRLEFEKVRQRVEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E+ K E GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEFSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIR-----------------TAYAETIPLG 279 N N ++F+N R V + I + + P Sbjct: 239 ISSE--AHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSSPRH 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 R + + V+ ++ + DV + PAK+ I F++ + I + +++ + + Sbjct: 297 RSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQSWDTVLICIQEGVKRFLKQ 350 >gi|225556781|gb|EEH05069.1| DNA mismatch repair protein mutL [Ajellomyces capsulatus G186AR] Length = 909 Score = 187 bits (474), Expect = 6e-45, Method: Composition-based stats. Identities = 87/445 (19%), Positives = 146/445 (32%), Gaps = 59/445 (13%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I +L I + + ++ P KELI+NSLDA ++ + +A Q+ DNG Sbjct: 1 MSIAQLPPDTIRAVRSNSVLSDPCALAKELIDNSLDAGATCISVEVAANTLDTIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGA-VSHLTLMSRPPQN 115 G+ + P+ +R CTSK+ DD NI T GFRGEAL S ++ + +R + Sbjct: 61 TGIHPNDRPLVCKRSCTSKLRSIDDLENIGGSTLGFRGEALASAAEMCGNIAITTRVSGD 120 Query: 116 NTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRR 174 + GT V V + +P R KS N + V+ Sbjct: 121 ---------------CTKASHPTGTTVRVYEFLRFVPVRKQRALKSASKTLNRMKKVLNA 165 Query: 175 MAIAYPKVSFTF-----STIKSNRYKMNFQSTNGN-----------------FPERISQV 212 ++ P++ +F S Y N T +I Sbjct: 166 YVLSRPEIRLSFKILKSKHDSSWIYASNKHPTVSTAMLRVIGAEAISQCTTITWPQIQDE 225 Query: 213 IGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ--FYVFINGRTV-QDKFILSTIR 269 + + I L P + + N YV I+ R + + + Sbjct: 226 RDDSLPGSVERSESIHPVIRLVATIPKPCSDFSSINYAGQYVSIDRRPMSTSNGVAKELA 285 Query: 270 TAYAETIPLGR----------YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF-- 317 + I G P + L P DVNV P K+ + F + ++ + Sbjct: 286 ELFKSHIRSGSLCDSGRTPPVDPFCFIHLHCRPGIYDVNVEPLKNDVLFEDSKLVMSIAG 345 Query: 318 -IIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL 376 I +++ I + + + SS + LF + Sbjct: 346 NIFKAVYGEIKPRHTHQRNCQIENQPSSSRMIRPLDKRSANNQRDHEVEESPLFRHISSS 405 Query: 377 STNDLLPSDDPTYSEDNDPVEESEA 401 +T D + S + A Sbjct: 406 ATKDCHSIERICASPSEAKKDNMSA 430 >gi|219124294|ref|XP_002182442.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406403|gb|EEC46343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 337 Score = 186 bits (473), Expect = 7e-45, Method: Composition-based stats. Identities = 72/332 (21%), Positives = 135/332 (40%), Gaps = 21/332 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR + + + +I AG+ + S A+KEL++N+LDA+S + + G +++D+G G Sbjct: 5 IRPIDPESVQRIVAGQAVFDLSTALKELVDNALDAKSRTINIRLFNLGIDILEVSDDGMG 64 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNI-HTFGFRGEALPSIGAVS-HLTLMSRPPQNNTG 118 + P H TSKI D+ T GFRGEAL + +S +L + +R T Sbjct: 65 VPLASRPYLATPHATSKIRAFDEIYATASTLGFRGEALFCLANLSTNLIVATRTRDEATA 124 Query: 119 AQIAISGE---KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRR 174 ++ + + +V + GT V V L +P R + +K Q + + ++ Sbjct: 125 QKLEFRRDGSLRTDTVTSILKKVGTTVAVVGLMDALPVRRHDLIKGIQTQRRTMLRMLEG 184 Query: 175 MAIAYPKVSFTFSTI-----KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN 229 AI P V F + + + + E +S +G + + + Sbjct: 185 YAIFSPGVGFRLMDMMDAGRGGESLLLATPQNSSSIEETVSATLGPKVLPFLCPIQVDLS 244 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 + + + N Y INGR V+ K + + A+ + + P L Sbjct: 245 TV-------LEAPTQSPRNSQYFAINGRPVELKQVSRVLNEAWRA-LGCKKRPFCALQFT 296 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 + + D+N+ P K + + I + + Sbjct: 297 LPNNEYDINLSPDKRTVMLTHEPQICALVRDA 328 >gi|56416597|ref|YP_153671.1| DNA mismatch repair protein [Anaplasma marginale str. St. Maries] gi|56387829|gb|AAV86416.1| DNA mismatch repair protein [Anaplasma marginale str. St. Maries] Length = 221 Score = 186 bits (473), Expect = 8e-45, Method: Composition-based stats. Identities = 80/189 (42%), Positives = 123/189 (65%), Gaps = 1/189 (0%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 G A Q+ YI+S+ D ++IVDQHAAHERL +E M++ + Q LL PE+++L Sbjct: 32 GNAVCQLFDRYIVSRAGDHVIIVDQHAAHERLTYEYMKKVTADEGMKRQVLLMPELVELD 91 Query: 467 EGEC-ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 L+ E+ E L + G+ E G +A+RE+PAIL ++ ++ I++ I++ Sbjct: 92 NEYELELLGEYKEKLLKFGLVIEPMGSMVVAVREVPAILGVFDVKAMIAKIVESIVEVGD 151 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 ++++I+++ T+ACY SIRSGR ++ EMN LLR+ME P+S QCNHGRPT++KL L Sbjct: 152 ALFMREKIKHVCGTIACYSSIRSGRTLKLEEMNSLLRQMEDTPHSGQCNHGRPTYVKLSL 211 Query: 586 SDIEKLFGR 594 S+I+KLF R Sbjct: 212 SEIDKLFER 220 >gi|241152210|ref|XP_002406861.1| DNA mismatch repair protein mlh3, putative [Ixodes scapularis] gi|215493958|gb|EEC03599.1| DNA mismatch repair protein mlh3, putative [Ixodes scapularis] Length = 354 Score = 186 bits (472), Expect = 9e-45, Method: Composition-based stats. Identities = 69/358 (19%), Positives = 148/358 (41%), Gaps = 26/358 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M++R L +I+++ +G I + ++E++ NSLDA ++ V + Q+ DNG Sbjct: 1 MELRALPADVISKLRSGVAIVSIAHCMEEVVLNSLDAGATCVAVRL-NLPYHKVQVVDNG 59 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNT 117 GM+ E++ + +R+ TSK D + +G+RGEA+ S+ +S L + SR ++ Sbjct: 60 HGMSREQLSVCGERYSTSKCRTLSDLEHPKFYGYRGEAIASLVEMSGMLQIESRAAGSDE 119 Query: 118 GAQIAISGEKISSVRPVAMNP---GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRR 174 + + + + GT V V D F +P R + + SE ++ ++ Sbjct: 120 SHCKIFTRGHMQELSSSSSKRPSVGTTVTVLDFMFNLPVRRSSV-SETIDFEFCLQLLEG 178 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 +A+++P+VSF+ S + + E SQ+ G+ + + +Q Sbjct: 179 LALSHPEVSFSLRDDISGEIRFQAHKSESVL-ETFSQLFGKQKAASLKHATLNKKKFAIQ 237 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET------IP---------LG 279 Y + + ++N R + I + +P Sbjct: 238 AYLSMEGHT--TRCLQFAYLNKRLLLKTRIHKLFHNVLKKYVLKYQTLPGLPTSPTKLRN 295 Query: 280 RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVL 337 ++P+ V+ ++ + D+ P K+ + F N + + + + I + + + Sbjct: 296 KHPIFVVFVKCLTKTYDITFEPRKTLVEFANWDTVTKAFECLLNGFLREHKIISHNFV 353 >gi|73963659|ref|XP_868128.1| PREDICTED: similar to DNA mismatch repair protein Mlh3 (MutL protein homolog 3) isoform 5 [Canis familiaris] Length = 1424 Score = 186 bits (472), Expect = 9e-45, Method: Composition-based stats. Identities = 88/410 (21%), Positives = 159/410 (38%), Gaps = 33/410 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I LS ++ ++ +G I ++EL+ NS+DAE+ V + Q+ DNGFG Sbjct: 2 IECLSVEVQARLRSGLAICSLGQCVEELVLNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S++I R+ TSK + D N +GFRGEAL SI + S + + S+ + Sbjct: 61 MGSDDIDKVGNRYFTSKCNSIQDLENPRFYGFRGEALASIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPVAMN---PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQNGKALKACEANLTRPSAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E+ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQV-PKTKDVCSRFCQIYGLGKSQKLREIKFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTI-----------------RTAYAETIPLG 279 N N ++F+N R V + I + + P Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKFIDFLLRRESIICKPKNGSSSRQVNSSPRH 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 R + + V+ ++ + DV + PAK+ I F++ + I ++++ + K+ + Sbjct: 297 RANPELHGIYVINMQCQFCEYDVCMEPAKTLIEFQDWDTVLVCIQEAVKMFLKKEKLFME 356 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 S D + + + +++ QE S +D Sbjct: 357 LSGEDIKEFSEDNDFSLFSATLQKHVPSDEKGDQVNFQEACNSISDSYEM 406 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 120/294 (40%), Gaps = 35/294 (11%) Query: 326 INKKGISTSSVLSKKMISSFHQDNAP-KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 +++ +V + + S F + P P+ A +++ Q K + + +++L Sbjct: 1093 LHENDTVDDTVGKESLQSLFSEWENPVFARYPEVAVDVSSGQAKSLV----VKIHNVLYP 1148 Query: 385 DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 T + + + + + LV+VDQHAAHER+ E++ Sbjct: 1149 YRFTKEMIHSM-QVLQQVDNKFIACLMSTKTEENGEAGGNLLVLVDQHAAHERVRLEQLI 1207 Query: 445 QDFNST---------KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA--ERFGPN 493 D K+ S T+ P I + E + L+ + ++L LG++ + Sbjct: 1208 TDSYEKQQPQGSGRKKLLSSTVSPPLKIRVTEEQRRLLRCYHKNLEDLGLEILFPDTNDS 1267 Query: 494 AIAIREIPAILSKKN---------------IPQLLRDIIDEIIDSSTT-YTLQDRIENIL 537 + + ++P ++ + + +R+ ++ + + TL ++ +L Sbjct: 1268 LVLVGKVPLCFIEREANELRRGRSPVTRNIVEEFIREQVELLQTTGGIQRTLPLTVQKVL 1327 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 A+ AC+G+I+ + E RL+ + QC HGRP+ + L +DI+ L Sbjct: 1328 ASQACHGAIKFNDGLSREESCRLIEALSWCQLPFQCAHGRPSMLPL--ADIDHL 1379 >gi|154301109|ref|XP_001550968.1| hypothetical protein BC1G_10527 [Botryotinia fuckeliana B05.10] gi|150856275|gb|EDN31467.1| hypothetical protein BC1G_10527 [Botryotinia fuckeliana B05.10] Length = 869 Score = 186 bits (472), Expect = 1e-44, Method: Composition-based stats. Identities = 71/403 (17%), Positives = 149/403 (36%), Gaps = 14/403 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ LS+ I+ + + +++ P+ IKELI+N+LDA+++ ++ +I+ ++ DNG Sbjct: 1 MAIKPLSDATIHLLGSSQVLTTPTSLIKELIDNALDAKATSIDILISQNTIDKIEVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+ +++ +R TSK++ + N+ ++ GFRGEAL S + ++++++ Sbjct: 61 HGIQPDDLDALGRRGHTSKLTTFTELRNLGGNSLGFRGEALASACQLGDVSIITKMDGQA 120 Query: 117 TGAQIA-ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNL-ITDVIRR 174 + + I S + GT ++ ++ S + Sbjct: 121 VATCVKLKALGGIQSQSRSSHPTGTTGTKGAWSYSPRPNISIKDSVSLAVGREAALQCSE 180 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 ++ +P+ ++ ++ N S E F+ K Sbjct: 181 ASMIFPEPPPDRENDTPEGAEIPTGASPAN-DVATSHFRLEAFLPRPDAEQGKIGHGQYF 239 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 P + + I R ++ + A E + + P + L + Sbjct: 240 SVDSRPVASDKGTMKKITIIFKRHLRSRLASG----ASPEKL---KNPFMRLNIVCPKAS 292 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 D NV PAK I F N T++ + + + G S V ++ + Sbjct: 293 YDPNVEPAKEDIIFENETLVLEAVEKMFKNFYGDCGTVMSKVARNNTVTQPTGFDILLAR 352 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 P+ + +T L + S+ T SE + Sbjct: 353 TPQQDSPSPSTVVNASLTPKKTPPASTPNSNSKTMSEVCPNIA 395 >gi|332661126|gb|AEE86526.1| DNA mismatch repair protein MLH3 [Arabidopsis thaliana] Length = 1169 Score = 186 bits (472), Expect = 1e-44, Method: Composition-based stats. Identities = 77/339 (22%), Positives = 150/339 (44%), Gaps = 33/339 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 MK I+ L E + + + +G I+ + ++EL+ NSLDA +++V + S ++ D+ Sbjct: 1 MKTIKPLPEGVRHSMRSGIIMFDMARVVEELVFNSLDAGATKVSIFVGVVSCS-VKVVDD 59 Query: 60 GFGMTSEEIPMAVQRHCTSKISDDFSNI----HTFGFRGEALPSIGAVSHLTLMSRPPQN 115 G G++ +++ + +R+ TSK DF+N+ TFGFRGEAL SI +S L + ++ Sbjct: 60 GSGVSRDDLVLLGERYATSKFH-DFTNVETASETFGFRGEALASISDISLLEVRTKAIGR 118 Query: 116 NTGAQIAISGEKISS--VRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVI 172 G + + G K + + GT V VRDLF++ P R ++ S + I + Sbjct: 119 PNGYRKVMKGSKCLHLGIDDDRKDSGTTVTVRDLFYSQPVRRKYMQSSPKKVLESIKKCV 178 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 R+A+ + VSF+ I+S+ ++ F + + G + +N+ ++N + Sbjct: 179 FRIALVHSNVSFSVLDIESDEELFQTNPSSSAF-SLLMRDAGTEAVNSLCKVNVTDGMLN 237 Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 + G+ + + R + P +L + Sbjct: 238 VSGFE--CADDWKPTDGQQTGRRNRLQSN--------------------PGYILCIACPR 275 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 R + + P+K+++ F+ + FI + K I Sbjct: 276 RLYEFSFEPSKTHVEFKKWGPVLAFIERITLANWKKDRI 314 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 70/527 (13%), Positives = 161/527 (30%), Gaps = 66/527 (12%) Query: 114 QNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR 173 G++ +S + S + + ++ P+ + Q ++ +R Sbjct: 611 DEKVGSKKYLSSVNVGSSVTGSFCLSSEW---SPMYSTPSATKWESEYQKGCRILEQSLR 667 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 + P+ F+ + +++ + + + Sbjct: 668 LGRMPDPEFCFSAANNIKFDHEVIPE------MDCCETGTDSFTAIQNCTQLADKICKSS 721 Query: 234 QGYTGIPTFNRG--NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 G+ ++ +F + K R+A R+ + + Sbjct: 722 WGHADDVRIDQYSIRKEKFSYMDGTQNNAGKQRSKRSRSAPPFYREKKRFISLSCKSDTK 781 Query: 292 P--------RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK--------------- 328 P ++ P + +I+ + IQ+ + Sbjct: 782 PKNSDPSEPDDLECLTQPCNASQMHLKCSILDDVSYDHIQETEKRLSSASDLKASAGCRT 841 Query: 329 -KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + + + S D T ++ +++ ++ + D+ Sbjct: 842 VHSETQDEDVHEDFSSEEFLDPIKSTTKWRHNCAVSQVPKESHELHGQDGVFDISSGLLH 901 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 S+++ E + Q+ + YI + IVDQHAA ER+ E++R Sbjct: 902 LRSDESLVPESINRHSLEDAKVLQQVDKKYIPIVACGTVAIVDQHAADERIRLEELRTKV 961 Query: 448 NSTKITSQTLLTPEI---------------IDLLEGECALIMEHDEDLHRLGIK--AERF 490 + K + T L+ + L E L+ + E + G Sbjct: 962 LAGKARTVTYLSADQELFINDALLIFVLTLKVLPEMGYQLLQSYSEQIRDWGWICNITVE 1021 Query: 491 GPNA--------------IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 G + I + +P IL L + + ++ D+ + T+ + + Sbjct: 1022 GSTSFKKNMSIIQRKPTPITLNAVPCILGVNLSDVDLLEFLQQLADTDGSSTIPPSVLRV 1081 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 L + AC G+I G + E + ++ +++ QC HGRPT + L Sbjct: 1082 LNSKACRGAIMFGDSLLPSECSLIIDGLKQTSLCFQCAHGRPTTVPL 1128 >gi|256750828|ref|ZP_05491713.1| MutL dimerisation [Thermoanaerobacter ethanolicus CCSD1] gi|256750411|gb|EEU63430.1| MutL dimerisation [Thermoanaerobacter ethanolicus CCSD1] Length = 212 Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 102/187 (54%), Gaps = 3/187 (1%) Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 + YII + D I+DQHAAHER+++EK + KI ++ + P +++L Sbjct: 27 RIVGTLFSTYIIVEKEDVFYIIDQHAAHERILYEKFTSQYE--KIQTRQVTFPIVVELQP 84 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY 527 + L+ + E L++LG E FG N+I +RE+P IL + QL DI++++ D Sbjct: 85 RDLELVHQEKELLNKLGYVFEEFGNNSIILREVPVILGQPEARQLFIDIVEKLKDKELVN 144 Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSD 587 + + ENI+ MAC ++++ + E+N+L +++ N C HGRP I + + Sbjct: 145 KISLKEENII-MMACKAAVKAMDNLSEKEINKLFDDLKITENPYTCPHGRPVIIAITKTQ 203 Query: 588 IEKLFGR 594 +EK+F R Sbjct: 204 LEKMFKR 210 >gi|240256168|ref|NP_195277.4| MLH3 (MUTL PROTEIN HOMOLOG 3); ATP binding / mismatched DNA binding [Arabidopsis thaliana] Length = 1155 Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 77/339 (22%), Positives = 150/339 (44%), Gaps = 33/339 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 MK I+ L E + + + +G I+ + ++EL+ NSLDA +++V + S ++ D+ Sbjct: 1 MKTIKPLPEGVRHSMRSGIIMFDMARVVEELVFNSLDAGATKVSIFVGVVSCS-VKVVDD 59 Query: 60 GFGMTSEEIPMAVQRHCTSKISDDFSNI----HTFGFRGEALPSIGAVSHLTLMSRPPQN 115 G G++ +++ + +R+ TSK DF+N+ TFGFRGEAL SI +S L + ++ Sbjct: 60 GSGVSRDDLVLLGERYATSKFH-DFTNVETASETFGFRGEALASISDISLLEVRTKAIGR 118 Query: 116 NTGAQIAISGEKISS--VRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVI 172 G + + G K + + GT V VRDLF++ P R ++ S + I + Sbjct: 119 PNGYRKVMKGSKCLHLGIDDDRKDSGTTVTVRDLFYSQPVRRKYMQSSPKKVLESIKKCV 178 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 R+A+ + VSF+ I+S+ ++ F + + G + +N+ ++N + Sbjct: 179 FRIALVHSNVSFSVLDIESDEELFQTNPSSSAF-SLLMRDAGTEAVNSLCKVNVTDGMLN 237 Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 + G+ + + R + P +L + Sbjct: 238 VSGFE--CADDWKPTDGQQTGRRNRLQSN--------------------PGYILCIACPR 275 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 R + + P+K+++ F+ + FI + K I Sbjct: 276 RLYEFSFEPSKTHVEFKKWGPVLAFIERITLANWKKDRI 314 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 70/513 (13%), Positives = 162/513 (31%), Gaps = 52/513 (10%) Query: 114 QNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR 173 G++ +S + S + + ++ P+ + Q ++ +R Sbjct: 611 DEKVGSKKYLSSVNVGSSVTGSFCLSSEW---SPMYSTPSATKWESEYQKGCRILEQSLR 667 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 + P+ F+ + +++ + + + Sbjct: 668 LGRMPDPEFCFSAANNIKFDHEVIPE------MDCCETGTDSFTAIQNCTQLADKICKSS 721 Query: 234 QGYTGIPTFNRG--NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 G+ ++ +F + K R+A R+ + + Sbjct: 722 WGHADDVRIDQYSIRKEKFSYMDGTQNNAGKQRSKRSRSAPPFYREKKRFISLSCKSDTK 781 Query: 292 P--------RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK--------------- 328 P ++ P + +I+ + IQ+ + Sbjct: 782 PKNSDPSEPDDLECLTQPCNASQMHLKCSILDDVSYDHIQETEKRLSSASDLKASAGCRT 841 Query: 329 -KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + + + S D T ++ +++ ++ + D+ Sbjct: 842 VHSETQDEDVHEDFSSEEFLDPIKSTTKWRHNCAVSQVPKESHELHGQDGVFDISSGLLH 901 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 S+++ E + Q+ + YI + IVDQHAA ER+ E++R Sbjct: 902 LRSDESLVPESINRHSLEDAKVLQQVDKKYIPIVACGTVAIVDQHAADERIRLEELRTKV 961 Query: 448 NSTKITSQTLLT-PEIIDLLEGECALIMEHDEDLHRLGIK--AERFGPNA---------- 494 + K + T L+ + + L E L+ + E + G G + Sbjct: 962 LAGKARTVTYLSADQELVLPEMGYQLLQSYSEQIRDWGWICNITVEGSTSFKKNMSIIQR 1021 Query: 495 ----IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGR 550 I + +P IL L + + ++ D+ + T+ + +L + AC G+I G Sbjct: 1022 KPTPITLNAVPCILGVNLSDVDLLEFLQQLADTDGSSTIPPSVLRVLNSKACRGAIMFGD 1081 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + E + ++ +++ QC HGRPT + L Sbjct: 1082 SLLPSECSLIIDGLKQTSLCFQCAHGRPTTVPL 1114 >gi|73963657|ref|XP_537511.2| PREDICTED: similar to DNA mismatch repair protein Mlh3 (MutL protein homolog 3) isoform 1 [Canis familiaris] Length = 1456 Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 88/410 (21%), Positives = 159/410 (38%), Gaps = 33/410 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I LS ++ ++ +G I ++EL+ NS+DAE+ V + Q+ DNGFG Sbjct: 2 IECLSVEVQARLRSGLAICSLGQCVEELVLNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S++I R+ TSK + D N +GFRGEAL SI + S + + S+ + Sbjct: 61 MGSDDIDKVGNRYFTSKCNSIQDLENPRFYGFRGEALASIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPVAMN---PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQNGKALKACEANLTRPSAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E+ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQV-PKTKDVCSRFCQIYGLGKSQKLREIKFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTI-----------------RTAYAETIPLG 279 N N ++F+N R V + I + + P Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKFIDFLLRRESIICKPKNGSSSRQVNSSPRH 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 R + + V+ ++ + DV + PAK+ I F++ + I ++++ + K+ + Sbjct: 297 RANPELHGIYVINMQCQFCEYDVCMEPAKTLIEFQDWDTVLVCIQEAVKMFLKKEKLFME 356 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 S D + + + +++ QE S +D Sbjct: 357 LSGEDIKEFSEDNDFSLFSATLQKHVPSDEKGDQVNFQEACNSISDSYEM 406 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 119/298 (39%), Gaps = 36/298 (12%) Query: 323 QKAINKKGISTSSVLSKKMISSFHQDNAPK--THLPKYATSLTNTQEKLFLQENRLSTND 380 + + + + + K+ + S + P+ A +++ Q K + + ++ Sbjct: 1121 RTMMRQNRDTVDDTVGKESLQSLFSEWENPVFARYPEVAVDVSSGQAKSLV----VKIHN 1176 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 +L T + + + + + LV+VDQHAAHER+ Sbjct: 1177 VLYPYRFTKEMIHSM-QVLQQVDNKFIACLMSTKTEENGEAGGNLLVLVDQHAAHERVRL 1235 Query: 441 EKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA--ER 489 E++ D K+ S T+ P I + E + L+ + ++L LG++ Sbjct: 1236 EQLITDSYEKQQPQGSGRKKLLSSTVSPPLKIRVTEEQRRLLRCYHKNLEDLGLEILFPD 1295 Query: 490 FGPNAIAIREIPAILSKKN---------------IPQLLRDIIDEIIDSSTT-YTLQDRI 533 + + + ++P ++ + + +R+ ++ + + TL + Sbjct: 1296 TNDSLVLVGKVPLCFIEREANELRRGRSPVTRNIVEEFIREQVELLQTTGGIQRTLPLTV 1355 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 + +LA+ AC+G+I+ + E RL+ + QC HGRP+ + L +DI+ L Sbjct: 1356 QKVLASQACHGAIKFNDGLSREESCRLIEALSWCQLPFQCAHGRPSMLPL--ADIDHL 1411 >gi|300122427|emb|CBK22998.2| unnamed protein product [Blastocystis hominis] Length = 234 Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 101/200 (50%), Gaps = 15/200 (7%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN---- 59 +K++ I++IA+G++I IKEL+ENSLDA ++ ++ + G ++ DN Sbjct: 6 KKINANDISKIASGQVIVDLRSVIKELVENSLDAGATNIDIRLVNYGADLIEVVDNGNYF 65 Query: 60 ------GFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVS-HLTLMS 110 G G+ + ++ TSKI D +IH+FGFRGEAL I +S +++ Sbjct: 66 LVPISVGSGILESDFSGLALKYYTSKIHSFGDIRSIHSFGFRGEALSCICELSGEFEVVT 125 Query: 111 RPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS-EQVETNLI 168 R ++ G I + + I++ A N GT + V++LF +P R + + + + Sbjct: 126 RHSSSDIGWNIRYNPDGSIAAKHERACNKGTTISVKNLFDRLPVRRRAYLHACKTQLSNM 185 Query: 169 TDVIRRMAIAYPKVSFTFST 188 +++ AI+ V F+ + Sbjct: 186 ITLVQSFAISSLGVRFSLTH 205 >gi|73963653|ref|XP_868119.1| PREDICTED: similar to mutL homolog 3 isoform 3 [Canis familiaris] Length = 1432 Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 88/410 (21%), Positives = 159/410 (38%), Gaps = 33/410 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I LS ++ ++ +G I ++EL+ NS+DAE+ V + Q+ DNGFG Sbjct: 2 IECLSVEVQARLRSGLAICSLGQCVEELVLNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S++I R+ TSK + D N +GFRGEAL SI + S + + S+ + Sbjct: 61 MGSDDIDKVGNRYFTSKCNSIQDLENPRFYGFRGEALASIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPVAMN---PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQNGKALKACEANLTRPSAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E+ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQV-PKTKDVCSRFCQIYGLGKSQKLREIKFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTI-----------------RTAYAETIPLG 279 N N ++F+N R V + I + + P Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKFIDFLLRRESIICKPKNGSSSRQVNSSPRH 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 R + + V+ ++ + DV + PAK+ I F++ + I ++++ + K+ + Sbjct: 297 RANPELHGIYVINMQCQFCEYDVCMEPAKTLIEFQDWDTVLVCIQEAVKMFLKKEKLFME 356 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 S D + + + +++ QE S +D Sbjct: 357 LSGEDIKEFSEDNDFSLFSATLQKHVPSDEKGDQVNFQEACNSISDSYEM 406 Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 78/175 (44%), Gaps = 21/175 (12%) Query: 436 ERLIFEKMRQDFNS-TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA--ERFGP 492 E +EK + + K+ S T+ P I + E + L+ + ++L LG++ Sbjct: 1215 EADSYEKQQPQGSGRKKLLSSTVSPPLKIRVTEEQRRLLRCYHKNLEDLGLEILFPDTND 1274 Query: 493 NAIAIREIPAILSKKN---------------IPQLLRDIIDEIIDSSTT-YTLQDRIENI 536 + + + ++P ++ + + +R+ ++ + + TL ++ + Sbjct: 1275 SLVLVGKVPLCFIEREANELRRGRSPVTRNIVEEFIREQVELLQTTGGIQRTLPLTVQKV 1334 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 LA+ AC+G+I+ + E RL+ + QC HGRP+ + L +DI+ L Sbjct: 1335 LASQACHGAIKFNDGLSREESCRLIEALSWCQLPFQCAHGRPSMLPL--ADIDHL 1387 >gi|325087793|gb|EGC41103.1| Pms1-prov protein [Ajellomyces capsulatus H88] Length = 903 Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 88/445 (19%), Positives = 152/445 (34%), Gaps = 59/445 (13%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I +L I + + ++ P KELI+NSLDA ++ + +A Q+ DNG Sbjct: 1 MSIAQLPPDTIRAVRSNSVLSDPCALAKELIDNSLDAGATCISVEVAANTLDTIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGA-VSHLTLMSRPPQN 115 G+ + P+ +R CTSK+ DD NI T GFRGEAL S ++ + +R + Sbjct: 61 TGIHPNDRPLVCKRSCTSKLRSIDDLENIGGSTLGFRGEALASAAEMCGNIAITTRVSGD 120 Query: 116 NTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRR 174 + GTIV V + +P R KS N + V+ Sbjct: 121 ---------------CTKASHPTGTIVRVYEFLRFVPVRKQRALKSTSKTLNRMKKVLNA 165 Query: 175 MAIAYPKV--SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK----- 227 ++ P++ SF K++ + + + + +VIG + I+ + Sbjct: 166 YVLSRPEIRLSFKILKSKNDSSWIYASNKHPTVSTAMLRVIGAEAISQCTTITWPQIQDE 225 Query: 228 ---------------SNEITLQGYTGIPTFNRGNANQ--FYVFINGRTV-QDKFILSTIR 269 I L P + N YV I+ R + + + Sbjct: 226 RDDSLSGSVERNESIHPVIRLVATIPKPCSDFSAINYAGQYVSIDRRPMSTSNGVAKELV 285 Query: 270 TAYAETIPLGR----------YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF-- 317 I G P + L P DVNV P K+ + F + ++ + Sbjct: 286 ELLKSHIRSGSLCDSGQTPPVDPFCFIHLHCRPGIYDVNVEPLKNDVLFEDSKLVMSIAG 345 Query: 318 -IIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL 376 + +++ I + + + SS + LF + Sbjct: 346 NLFKAVYGEIKPRHTHQRNCQIENQPSSSRVIRPLDKRSANNQRDHEVEESPLFRHISSS 405 Query: 377 STNDLLPSDDPTYSEDNDPVEESEA 401 +T D + S + A Sbjct: 406 ATKDCHFIERICASPSEAKKDNMSA 430 >gi|73963655|ref|XP_868122.1| PREDICTED: similar to DNA mismatch repair protein Mlh3 (MutL protein homolog 3) isoform 4 [Canis familiaris] Length = 1280 Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 88/410 (21%), Positives = 159/410 (38%), Gaps = 33/410 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I LS ++ ++ +G I ++EL+ NS+DAE+ V + Q+ DNGFG Sbjct: 2 IECLSVEVQARLRSGLAICSLGQCVEELVLNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S++I R+ TSK + D N +GFRGEAL SI + S + + S+ + Sbjct: 61 MGSDDIDKVGNRYFTSKCNSIQDLENPRFYGFRGEALASIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPVAMN---PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQNGKALKACEANLTRPSAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E+ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQV-PKTKDVCSRFCQIYGLGKSQKLREIKFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTI-----------------RTAYAETIPLG 279 N N ++F+N R V + I + + P Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKFIDFLLRRESIICKPKNGSSSRQVNSSPRH 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 R + + V+ ++ + DV + PAK+ I F++ + I ++++ + K+ + Sbjct: 297 RANPELHGIYVINMQCQFCEYDVCMEPAKTLIEFQDWDTVLVCIQEAVKMFLKKEKLFME 356 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 S D + + + +++ QE S +D Sbjct: 357 LSGEDIKEFSEDNDFSLFSATLQKHVPSDEKGDQVNFQEACNSISDSYEM 406 Score = 102 bits (253), Expect = 3e-19, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 88/258 (34%), Gaps = 34/258 (13%) Query: 353 THLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQ 412 P+ + + + + E + + V+E +T Sbjct: 993 ASEPQIGSPDSPNRMSVSHVEVSTADQNGTCFQSEESIARTCSVDEESSTCSLDWQQHFD 1052 Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID-LLEGECA 471 + ++ ++ + T LT +D L E Sbjct: 1053 VALGRMVY-------------INKITGLSTFTAPTEDVRATCTKDLTTIAVDVLHENGNY 1099 Query: 472 LIMEHDEDLHRLGIKA--ERFGPNAIAIREIPAILSKKN---------------IPQLLR 514 L + ++L LG++ + + + ++P ++ + + +R Sbjct: 1100 LFRCYHKNLEDLGLEILFPDTNDSLVLVGKVPLCFIEREANELRRGRSPVTRNIVEEFIR 1159 Query: 515 DIIDEIIDSSTT-YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 + ++ + + TL ++ +LA+ AC+G+I+ + E RL+ + QC Sbjct: 1160 EQVELLQTTGGIQRTLPLTVQKVLASQACHGAIKFNDGLSREESCRLIEALSWCQLPFQC 1219 Query: 574 NHGRPTFIKLKLSDIEKL 591 HGRP+ + L +DI+ L Sbjct: 1220 AHGRPSMLPL--ADIDHL 1235 >gi|237838861|ref|XP_002368728.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49] gi|211966392|gb|EEB01588.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49] Length = 1219 Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 2/128 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+L ++ IAAGE++ RPS A+KEL+EN+LDA SS + + GG ++D+G Sbjct: 135 QIRRLDPSVVQLIAAGEVVLRPSSALKELLENALDARSSSISVSVHNGGFKLLAVSDDGC 194 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +++ + QR TSK+ D ++TFGFRGEAL S+ V + + +R G Sbjct: 195 GIHPQDLTILCQRFTTSKLKALSDLRCMNTFGFRGEALASLAVVGQVDVTTRIASLPHGY 254 Query: 120 QIAISGEK 127 + + + Sbjct: 255 RCSYDKGE 262 Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 46/106 (43%) Query: 228 SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLL 287 ++++ GY + F +FINGR V + +I Y E +P G V L Sbjct: 584 QCQVSVWGYASRISAGVKPPGTFILFINGRLVDAPTLRKSIEGVYQELLPRGLKAWVYLS 643 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 L + P +DVNVHP K ++ + + + ++ + + S Sbjct: 644 LTLPPWLIDVNVHPTKQRVQLLYEDFVAANLAKHFRERLGSQASSQ 689 Score = 44.3 bits (103), Expect = 0.058, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 24/63 (38%) Query: 134 VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNR 193 A + GT + V LF P R L S Q E DV R AI P + FT + Sbjct: 332 AARSRGTTLRVSRLFHAFPERRKMLASPQEEYAKCLDVCMRYAIDNPHIKFTCRRQDKTQ 391 Query: 194 YKM 196 Sbjct: 392 TDF 394 >gi|3367570|emb|CAA20022.1| putative protein [Arabidopsis thaliana] gi|7270503|emb|CAB80268.1| putative protein [Arabidopsis thaliana] Length = 1151 Score = 186 bits (471), Expect = 1e-44, Method: Composition-based stats. Identities = 77/339 (22%), Positives = 150/339 (44%), Gaps = 33/339 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 MK I+ L E + + + +G I+ + ++EL+ NSLDA +++V + S ++ D+ Sbjct: 1 MKTIKPLPEGVRHSMRSGIIMFDMARVVEELVFNSLDAGATKVSIFVGVVSCS-VKVVDD 59 Query: 60 GFGMTSEEIPMAVQRHCTSKISDDFSNI----HTFGFRGEALPSIGAVSHLTLMSRPPQN 115 G G++ +++ + +R+ TSK DF+N+ TFGFRGEAL SI +S L + ++ Sbjct: 60 GSGVSRDDLVLLGERYATSKFH-DFTNVETASETFGFRGEALASISDISLLEVRTKAIGR 118 Query: 116 NTGAQIAISGEKISS--VRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVI 172 G + + G K + + GT V VRDLF++ P R ++ S + I + Sbjct: 119 PNGYRKVMKGSKCLHLGIDDDRKDSGTTVTVRDLFYSQPVRRKYMQSSPKKVLESIKKCV 178 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 R+A+ + VSF+ I+S+ ++ F + + G + +N+ ++N + Sbjct: 179 FRIALVHSNVSFSVLDIESDEELFQTNPSSSAF-SLLMRDAGTEAVNSLCKVNVTDGMLN 237 Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 + G+ + + R + P +L + Sbjct: 238 VSGFE--CADDWKPTDGQQTGRRNRLQSN--------------------PGYILCIACPR 275 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 R + + P+K+++ F+ + FI + K I Sbjct: 276 RLYEFSFEPSKTHVEFKKWGPVLAFIERITLANWKKDRI 314 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 68/512 (13%), Positives = 159/512 (31%), Gaps = 54/512 (10%) Query: 114 QNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR 173 G++ +S + S + + ++ P+ + Q ++ +R Sbjct: 611 DEKVGSKKYLSSVNVGSSVTGSFCLSSEW---SPMYSTPSATKWESEYQKGCRILEQSLR 667 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 + P+ F+ + +++ + + + Sbjct: 668 LGRMPDPEFCFSAANNIKFDHEVIPE------MDCCETGTDSFTAIQNCTQLADKICKSS 721 Query: 234 QGYTGIPTFNRG--NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 G+ ++ +F + K R+A R+ + + Sbjct: 722 WGHADDVRIDQYSIRKEKFSYMDGTQNNAGKQRSKRSRSAPPFYREKKRFISLSCKSDTK 781 Query: 292 P--------RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK--------------- 328 P ++ P + +I+ + IQ+ + Sbjct: 782 PKNSDPSEPDDLECLTQPCNASQMHLKCSILDDVSYDHIQETEKRLSSASDLKASAGCRT 841 Query: 329 -KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + + + S D T ++ +++ ++ + D+ Sbjct: 842 VHSETQDEDVHEDFSSEEFLDPIKSTTKWRHNCAVSQVPKESHELHGQDGVFDISSGLLH 901 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 S+++ E + Q+ + YI + IVDQHAA ER+ E++R F Sbjct: 902 LRSDESLVPESINRHSLEDAKVLQQVDKKYIPIVACGTVAIVDQHAADERIRLEELRTKF 961 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK--AERFGPNA----------- 494 + + + + L E L+ + E + G G + Sbjct: 962 INDAL---LIFVLTLKVLPEMGYQLLQSYSEQIRDWGWICNITVEGSTSFKKNMSIIQRK 1018 Query: 495 ---IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRK 551 I + +P IL L + + ++ D+ + T+ + +L + AC G+I G Sbjct: 1019 PTPITLNAVPCILGVNLSDVDLLEFLQQLADTDGSSTIPPSVLRVLNSKACRGAIMFGDS 1078 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + E + ++ +++ QC HGRPT + L Sbjct: 1079 LLPSECSLIIDGLKQTSLCFQCAHGRPTTVPL 1110 >gi|126282671|ref|XP_001375015.1| PREDICTED: similar to RNA binding motif protein 22 [Monodelphis domestica] Length = 1453 Score = 185 bits (470), Expect = 2e-44, Method: Composition-based stats. Identities = 101/506 (19%), Positives = 184/506 (36%), Gaps = 40/506 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LSE++ ++ +G I S I+EL NS+DA++ V I Q+ DNG G Sbjct: 2 IKCLSEEVQVKLRSGVAIGSLSQCIEELALNSIDADAKCVAVRI-NMETFKVQVIDNGSG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M ++I +++ TSK D N +GFRGEAL SI + S + + S+ + Sbjct: 61 MERDDIERVGKQYFTSKCKSVQDLENPKFYGFRGEALSSIANMASAVEISSKTNRTVKTF 120 Query: 120 QIAISGEK---ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 MKLFQNGKTLEVCEAEVTRPSSGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E+ K E L GY Sbjct: 180 LMHPSISFSLRNDISGSMVLQL-PKTKDTCSRFCQIYGLGKSQKLREIKFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIR-----------------TAYAETIPLG 279 N N ++F+N R V + I + P Sbjct: 239 ISSE--AHYNKNLQFLFVNKRLVLRTRLHKLIDFLLRKESIICRPKGSFASKQMSLSPPR 296 Query: 280 R------YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 Y + VL ++ + DV + PAK+ I F+N I + I+ + ++ + Sbjct: 297 HRSNPELYGIYVLNVKCQFCEYDVCLDPAKTLIEFKNWDTILVCFQEGIKTFLKQEQL-- 354 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 LS + I F++D+ ++ + +Q N + + ++ + Sbjct: 355 FVELSGEDIKEFNEDSGLTLFSAILQPMASDEKC---VQNNFQEACENIMDSYEIFNMKS 411 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 V+ A C ++ + L D + + + E + T+ Sbjct: 412 KTVKRKAAMESITLKTCGS-EEDLEQVKDCQVLTSSDPNDTYFNDMIESSVPCQDGTRSE 470 Query: 454 SQTLLTPEIIDLLEGECALIMEHDED 479 L E+ + E Sbjct: 471 PNVLKQQEMKFTDSEKNNTKNTCLEL 496 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 31/194 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S T+ P + + E + L+ + Sbjct: 1226 LVLVDQHAAHERIRLEQLIYDSYEKEQPKSFRRKKLLSSTIYPPMEVTVTEEQRRLLECY 1285 Query: 477 DEDLHRLGIKAERFGPNA---IAIREIPAILSKKNI---------------PQLLRDIID 518 + L LG+K F + + ++P ++ + +R+ ++ Sbjct: 1286 HKGLEGLGLKL-IFPDATSSHVLVEKVPLCFVEREANEVRRGRPTVTKSMLEEFIREQVE 1344 Query: 519 EIIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 + + TL I+ +LA+ AC+G+I+ + E RL+ + + QC HGR Sbjct: 1345 LLQTTGGAQGTLPLAIQKVLASQACHGAIKFNDSLSLRESRRLIEALSQCQLPFQCAHGR 1404 Query: 578 PTFIKLKLSDIEKL 591 P+ + L +DI+ L Sbjct: 1405 PSMLPL--ADIDHL 1416 >gi|301757817|ref|XP_002914774.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Ailuropoda melanoleuca] Length = 889 Score = 185 bits (470), Expect = 2e-44, Method: Composition-based stats. Identities = 89/425 (20%), Positives = 163/425 (38%), Gaps = 33/425 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NSLDAE+ V + Q+ DNG G Sbjct: 2 IKCLSVEVQARLRSGLAICSLGQCVEELALNSLDAEAKCVAVRV-NMETFQVQVIDNGLG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S++I R+ TSK + D N +GFRGEAL SI + S + + S+ + Sbjct: 61 MGSDDIDKVGNRYFTSKCNSIQDLENPRFYGFRGEALASIADMASAVEISSKKNRTGKTF 120 Query: 120 QIAISGEKISSVRPVAMN---PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ P R + ++E + I ++ Sbjct: 121 VKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQFPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G ++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLAKSQKLRDIKFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIR-----------------TAYAETIPLG 279 N N ++F+N R + + I + P Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLILRTKLHKFIDFLLRKESIICKPKNGSAARQMNSSPRH 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 R + + V+ ++ + DV + PAK+ I F+N + I + ++ + K+ + Sbjct: 297 RSNPELHGIYVVNMQCRFCEYDVCMEPAKTLIEFQNWDTVLVCIQEGVKMFLKKEKLFVE 356 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 S D + + + S ++LF E + + ++P D +++ Sbjct: 357 LSGEDIKEFSEDNDFSLFSATLQKRVSSDEKGDQLFQNEYEKTESGIIPVLDSVTQDNSF 416 Query: 395 PVEES 399 + Sbjct: 417 NKDSE 421 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S + P I + E + L+ + Sbjct: 654 LVLVDQHAAHERVRLEQLITDSYEKQQPQGSGRKKLLSSIVSPPLEIRVTEEQRRLLRCY 713 Query: 477 DEDLHRLGIKAE--RFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 ++L LG++ + + + ++P ++ + + +R+ ++ Sbjct: 714 HKNLEDLGLEIIFPDTSDSLVLVGKVPLCFVEREANELRRGRSPVTKSIVEEFIREQVEL 773 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP Sbjct: 774 LQTTGAIQGTLPLTVQKVLASQACHGAIKFNDGLSPEESCRLIEALSWCQLPFQCAHGRP 833 Query: 579 TFIKLKLSDIEKL 591 + + L +DI+ L Sbjct: 834 SMLPL--ADIDHL 844 >gi|255002939|ref|ZP_05277903.1| DNA mismatch repair protein (mutL) [Anaplasma marginale str. Puerto Rico] gi|255004064|ref|ZP_05278865.1| DNA mismatch repair protein (mutL) [Anaplasma marginale str. Virginia] Length = 199 Score = 185 bits (470), Expect = 2e-44, Method: Composition-based stats. Identities = 79/189 (41%), Positives = 123/189 (65%), Gaps = 1/189 (0%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 G A Q+ YI+S+ D ++IVDQHAAHERL +E M++ + Q LL PE+++L Sbjct: 10 GNAVCQLFDRYIVSRAGDHVIIVDQHAAHERLTYEYMKKVTADEGMKRQVLLMPELVELD 69 Query: 467 EGEC-ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSST 525 L+ E+ E L + G+ E G +A+RE+PAIL ++ ++ I++ I++ Sbjct: 70 NEYELELLGEYKEKLLKFGLVIEPMGSMVVAVREVPAILGVFDVKAMIAKIVESIVEVGD 129 Query: 526 TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKL 585 ++++I+++ T+ACY SIRSGR ++ EMN LLR+ME P+S QCNHGRPT++KL L Sbjct: 130 ALFMREKIKHVCGTIACYSSIRSGRTLKLEEMNSLLRQMEDTPHSGQCNHGRPTYVKLSL 189 Query: 586 SDIEKLFGR 594 S+I++LF R Sbjct: 190 SEIDRLFER 198 >gi|296215528|ref|XP_002754163.1| PREDICTED: DNA mismatch repair protein Mlh3 [Callithrix jacchus] Length = 1456 Score = 184 bits (468), Expect = 3e-44, Method: Composition-based stats. Identities = 81/354 (22%), Positives = 142/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKCLSAEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK D N +GFRGEAL SI + S + + S+ + Sbjct: 61 MGSDDVDKVGNRYFTSKCHSVQDLENPRFYGFRGEALASIADMASTVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQNGKALKACEADVTRPSAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PRTKDVCSRFCQIYGLGKSQKLREISFKYKEFELNGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTI-----------------RTAYAETIPLG 279 N N ++F+N R + + I + P Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLILRTKLHKLIDFLLRKESIICKPKNGSSNRQMNSSPRP 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 R Y + V+ ++ + DV + PAK+ I F+N + I + ++ + + Sbjct: 297 RSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLYCIQEGVKMFLKQ 350 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 94/228 (41%), Gaps = 29/228 (12%) Query: 391 EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 E ++ + + + + LV+VDQHAAHER+ E++ D Sbjct: 1187 EMIHSMQVLQQVDNKFIACLMSTNTEENGKAGGNLLVLVDQHAAHERVRLEQLINDSYEK 1246 Query: 451 ---------KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG--IKAERFGPNAIAIRE 499 K+ S TL+ P I + E + L+ + ++L LG + + + + Sbjct: 1247 QQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLRCYHKNLEDLGLEFVFPDTSDSLVLVGK 1306 Query: 500 IPAILSKKN---------------IPQLLRDIIDEIIDSSTTY-TLQDRIENILATMACY 543 +P ++ + + +R+ ++ + + L ++ +LA+ AC+ Sbjct: 1307 VPLCFVEREANELRRGRSTVTRSMVEEFIREQVELLQTTGGIQGILPLTVQKVLASQACH 1366 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 G+++ + E RL+ + QC HGRP+ + L +DI+ L Sbjct: 1367 GAVKFNDGLSLEESCRLIEALSLCQLPFQCAHGRPSMLPL--ADIDHL 1412 >gi|224051509|ref|XP_002199972.1| PREDICTED: similar to mutL homolog 3 (E. coli) [Taeniopygia guttata] Length = 1432 Score = 184 bits (468), Expect = 3e-44, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 148/358 (41%), Gaps = 34/358 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E + ++ + + ++EL+ NS+DA+++ V + Q+ DNG G Sbjct: 2 IRRLVEDVRARLRSEVTVNSLGHCVEELVLNSIDAKATCVAIRVDLEAFK-IQVVDNGSG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M E++ +R+ TSK S D N+ +GFRGEAL SI + S + + S+ + Sbjct: 61 MGKEDLKAVGKRYFTSKCSSVRDLENLTFYGFRGEALASIANMASVVEISSKTSRTAKTF 120 Query: 120 QIAISGEKISSVRPVAMNP---GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 + V +N GT V V +LF +P R + +E + + ++ Sbjct: 121 MKLFHNGQALEVCEAELNRPSGGTTVTVCNLFHQLPVRRKCMDPV-LEIERVRQKVEAVS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P VS + S + T + R Q+ G E+N KS + G+ Sbjct: 180 LMHPSVSLSLRNDVSCSMVLQLPKTR-DVYSRFCQIYGLGRSQKLREINHKSGGFEISGF 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRT--------AYAETIPLGR-------- 280 N N ++++N R V + I A+++P R Sbjct: 239 ISTE--GHYNKNMQFLYVNRRLVLKTRLHKLIDFLLRKESVICKAKSVPANRQANSSPGR 296 Query: 281 -------YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGI 331 Y + +L + DV + PAK+ I F+N ++ I + ++ + ++ + Sbjct: 297 YRSGPELYGIFILNVTCAYSDYDVCLEPAKTLIEFQNWDVLLTCIEEGVKIFLKREHL 354 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 52/235 (22%), Positives = 94/235 (40%), Gaps = 32/235 (13%) Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG---LVIVDQHAAHERLIFEKM 443 Y D V + A + + L++VDQHAAHER+ E++ Sbjct: 1173 YPYRFTKDMVHSMQVLQQVDNKFIACLINTRNGMEKKADGNLLILVDQHAAHERIRLEQL 1232 Query: 444 RQDFNST--------KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE--RFGPN 493 D KI S ++ P I++ E + + ++L LG++ + Sbjct: 1233 IADSYEKEAAACGKKKILSSSISPPLEIEVTEEQRRFLRCCYKNLEDLGLELSFPETNNS 1292 Query: 494 AIAIREIPAILSKKNIPQL-----------LRDIIDEIIDS------STTYTLQDRIENI 536 I +R++P ++ +L + ++I E ++ TL + Sbjct: 1293 LILVRKVPMCFIEREANELRRKRQPITKSIVEELIQEQVELLQTTRGGARGTLPLTFLKV 1352 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 LA+ AC+G+I+ + E RL+ + QC HGRP+ + L +DI+ L Sbjct: 1353 LASQACHGAIKFNEHLTLEESCRLIEALSSCKLPFQCAHGRPSMLPL--ADIDHL 1405 >gi|302694191|ref|XP_003036774.1| hypothetical protein SCHCODRAFT_103012 [Schizophyllum commune H4-8] gi|300110471|gb|EFJ01872.1| hypothetical protein SCHCODRAFT_103012 [Schizophyllum commune H4-8] Length = 816 Score = 184 bits (467), Expect = 4e-44, Method: Composition-based stats. Identities = 79/420 (18%), Positives = 156/420 (37%), Gaps = 22/420 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVI--AGGGKSFFQITDN 59 ++ +LSE ++ + +I+ + EL++NSLDA + V+ + G + D+ Sbjct: 4 RLERLSEATQTRLRSTQILTSLPQLVSELVQNSLDAGARHVDVGVNCEEYGCW---VRDD 60 Query: 60 GFGMTSEEIPMA-----VQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRP 112 G GM ++ +R+ +SK+ + TFGFRGEAL S + L + SR Sbjct: 61 GCGMGRTDLDALAAGGGGERYVSSKVYAPNQVGEQATFGFRGEALASAADLCCLEIASRT 120 Query: 113 PQNNTGAQIAISGEKISSVRPVAM----NPGTIVEVRDLFFTIPARLNFLKSEQVETNLI 168 ++ I + K P PGT+V VRD F+ +P R S LI Sbjct: 121 ARSRESWSIILKDRKTLYNGPAVRWRRETPGTVVCVRDAFYNLPVRRRSHPSPSRTLELI 180 Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS 228 + A+ +P V+F+ +++ + S P + Sbjct: 181 RQELSAYALVFPHVTFSLENTSTSQQSTSSSSNILRIPAVCVPSHDSGLVLTLAADKLDV 240 Query: 229 NEITLQGYTGI---PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG-RYPVV 284 +++ + + + + I+ R F + + +P + PV Sbjct: 241 DDLQTYTWACSGADVNRHPLAPSDMHRLIDQRFASSSFGMHALDEDGQNDLPKSEKRPVY 300 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 VL + + P Q+D + PAK+ + F + + + + +++ +++ G ++ +K Sbjct: 301 VLNITVPPHQIDNCLEPAKAEVNFEDRRSVIDLLDRAVSSFLSRNGFRAATPSPRKRRKV 360 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFL--QENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 P+ A S+ + + D+ S E E Sbjct: 361 APDGPGVDVTPPRRAASMPKRVSAPVYIDRASSFPIASGARLDNGRPSTATRREEHEEIW 420 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 104/324 (32%), Gaps = 67/324 (20%) Query: 327 NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDD 386 + L + + AP + + +L+ Q ++ ++ ++ + Sbjct: 472 QSSATPAETPLWIRKALEANVSYAPTQNRQEPQRALSFQQRRMLQEQQARASQPQGRTAQ 531 Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYII------------SQTTDGLVIVDQHAA 434 ++ + C I + GLV++DQHAA Sbjct: 532 EERRAYQFSTDDLRRARVIAQVDCKFIACMMQPAAASTKDDSSEKQRARSGLVLIDQHAA 591 Query: 435 HERLIFEKMRQ---------DFNSTKITSQTLLTPEIIDLL--EGECALIMEHDEDLHRL 483 ER+ E+ + + + L P+ I L E + + E+ Sbjct: 592 DERVRVERYMRELCTGFTAARAGQQGVRCRALDPPKAILLTRKERQQLYVEENRRAFGWW 651 Query: 484 GIKAERFGPN---------------------AIAIREIPAILSKKNI-PQLLRDII---- 517 G + G + + + +P ++++K + LRD++ Sbjct: 652 GFRFTDEGEDVHGDALEGDMDDAGKGGSAYAQVEVVFVPEMIAEKLLLENELRDLVKGYL 711 Query: 518 ------------DEIIDSSTTYTLQDRIE------NILATMACYGSIRSGRKMQSIEMNR 559 + ++ L+ +IL + AC G+I + + + Sbjct: 712 AKLADEGAPPRTSNVAADGSSGWLKALRWCPKELVDILNSKACRGAIMFNDPLSMAQCEK 771 Query: 560 LLREMEKNPNSSQCNHGRPTFIKL 583 L++++ + QC HGRP+ + L Sbjct: 772 LIKQLTETAFPFQCAHGRPSLVPL 795 >gi|1055354|gb|AAA97458.1| hPMSR2 [Homo sapiens] Length = 389 Score = 184 bits (466), Expect = 5e-44, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 4/185 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPS-IAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + K ++QI +G ++ A+KEL+ENSLDA ++ V+ + G +++ NG Sbjct: 163 IKPIDRKSVHQICSGPVVPSLRPNAVKELVENSLDAGATNVDLKLKDYGVDLIEVSGNGC 222 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ E +H T KI + D + + TFGFRGEAL S+ A+S +T+ + G Sbjct: 223 GVEEENFEGFTLKHHTCKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCRVSAKVGT 282 Query: 120 QIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ KI P G V V+ LF T+P + + Sbjct: 283 RLVFDHYGKIIQKTPYPRPRGMTVSVKQLFSTLPVHHKEFQRNIKKKRACFPFAFCRDCQ 342 Query: 179 YPKVS 183 +P+ S Sbjct: 343 FPEAS 347 >gi|51245819|ref|YP_065703.1| DNA mismatch repair protein MutL [Desulfotalea psychrophila LSv54] gi|50876856|emb|CAG36696.1| related to DNA mismatch repair protein MutL [Desulfotalea psychrophila LSv54] Length = 312 Score = 184 bits (466), Expect = 5e-44, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 127/264 (48%), Gaps = 2/264 (0%) Query: 332 STSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSE 391 S+V+ +K + + +T + QE ++ + + + Sbjct: 49 VQSAVVGEKSAAPMRVEPLVETAEGTEVYQRQEPAKVYQRQEPAVTESSRVEAVQIDQEP 108 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK 451 + + E + Q+ YI ++ GLV++DQHAAHERL++EK+++ F++ Sbjct: 109 VAEQLLPREE-EGRGLEILGQVDNLYIFCRSQAGLVVIDQHAAHERLLYEKLKKHFSANS 167 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + Q LL PE ++L + L+ +H EDL ++G FG N+ I IPA+ + + Sbjct: 168 MVKQNLLFPETVELSLYQSQLVEKHLEDLEKMGFSLRDFGGNSYVIGAIPALAGQIAPQK 227 Query: 512 LLRDIIDEIIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 + D++++ + D +++ILA+MAC +I++G ++ EM LL +M Sbjct: 228 IFFDVLEQFGADGKSRKDAGDMLDSILASMACRAAIKAGARLSQREMESLLADMAAADLF 287 Query: 571 SQCNHGRPTFIKLKLSDIEKLFGR 594 S C HGRP + +I+K F R Sbjct: 288 SHCPHGRPVVKQFSSDEIKKWFYR 311 >gi|116206880|ref|XP_001229249.1| hypothetical protein CHGG_02733 [Chaetomium globosum CBS 148.51] gi|88183330|gb|EAQ90798.1| hypothetical protein CHGG_02733 [Chaetomium globosum CBS 148.51] Length = 821 Score = 183 bits (465), Expect = 7e-44, Method: Composition-based stats. Identities = 80/402 (19%), Positives = 153/402 (38%), Gaps = 42/402 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L E + + + +I P + +KEL++N++DA ++ ++ +++ ++ DNG Sbjct: 1 MSIVPLPEATVRNLGSSLVITSPVVLLKELVDNAIDAGATSIDVLVSPNTIDKIEVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G++ + TSK++ D+ + T GFRG AL S +++++L +R P + Sbjct: 61 HGISPADFGYLGCPGHTSKLTSLDELDTLGGKTLGFRGVALASANTLANVSLTTRVPTEH 120 Query: 117 TGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRR 174 A I+++ + ++R V GT V V +LF +P R +K + ++++ Sbjct: 121 VAAAISLAKRGGVDTLRYVGAPVGTTVRVTNLFSHMPVRSQVTVKEAPRNLARMNELLQS 180 Query: 175 MAIAYPKVSFTFSTIKSNRYKM-NFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 +A P V F+ +K+ + NG Q+ G + + V S Sbjct: 181 YVLARPTVKLRFTVLKTPNLSWSYAPAANGEIKAAAIQLFGTELASQCVFKTSPSQITPG 240 Query: 234 QGYTGI----PTFNR--------------GNANQFYVFINGRTVQDKFILSTIRTAYAET 275 T P + A+ + D LS R A + Sbjct: 241 GDKTSRDENVPDCSPKEGTRVIFEALLPRPTADPQKISKGAFISVDARPLSAFRGAAKKL 300 Query: 276 IPLG-----------------RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI 318 + + R P + L + P DVNV P+K + F+ I + Sbjct: 301 LSIFKKRIGDHFASIHSETILRNPFIRLNIRCPPSTYDVNVEPSKEDVIFKEEHNIIDQF 360 Query: 319 IQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 + G+ S L + + KT ++ Sbjct: 361 ESFLSYVYPASGVGQSRPLPITTTGTSVEAPGRKTTNISNSS 402 >gi|119180246|ref|XP_001241612.1| hypothetical protein CIMG_08775 [Coccidioides immitis RS] Length = 682 Score = 183 bits (464), Expect = 8e-44, Method: Composition-based stats. Identities = 81/328 (24%), Positives = 139/328 (42%), Gaps = 11/328 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I +L + I + I P ++ELI+N+LDA ++ + ++ + DNG Sbjct: 1 MPIAELDRAAAHAIGSASAISDPCSVVRELIDNALDANATIISVELSANLLDTIHVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVSHLT-LMSRPPQN 115 G+ E+ + +++CTSKI DD ++ GFRG+AL S +S T +++R Sbjct: 61 LGIPPEDRELICRQNCTSKIKTLDDLKHVGGKLLGFRGQALASTTQMSESTVIITRITAE 120 Query: 116 NTGA--QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVI 172 T + + +G+ +SS VA GT V V +P R + KS + I + Sbjct: 121 TTASILEFGRAGDILSSKGMVAHPVGTSVRVSGFLKYLPVRRQMVLKSSSKIVSRIKKAL 180 Query: 173 RRMAIAYPKV--SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE 230 + A++ P V S S K + + + + IS++IG + + + + N+ Sbjct: 181 QNYALSRPWVRLSLKISRQKRGFAWIYAPKQSPSVADAISKIIGAEVAAHRLGQSLTHND 240 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTI-RTAYAETIPLGRYPVVVLLLE 289 + + + +A + K S I RT + P P V L L Sbjct: 241 PNPENSDEGKSTAQVHAVIPKLDAGIAKDLVKIYKSYINRTFGRPSTPAITDPFVYLYLS 300 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 P DVNV P+K + F + I Sbjct: 301 CPPGIYDVNVDPSKDDVLFADSRSILCL 328 >gi|149737526|ref|XP_001490730.1| PREDICTED: similar to DNA mismatch repair protein Mlh3 (MutL protein homolog 3) [Equus caballus] Length = 1453 Score = 183 bits (464), Expect = 8e-44, Method: Composition-based stats. Identities = 86/400 (21%), Positives = 158/400 (39%), Gaps = 33/400 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKRLSVEVQAKLRSGLAICSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK S D N+ +GFRGEAL SI + S + + S+ + Sbjct: 61 MGSDDVDKVGNRYFTSKCSSLQDLENLRFYGFRGEALASIADMASAVEISSKKNKTMKTF 120 Query: 120 QIAISGEKISSVRPVAM---NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + + GT V V +LF+ +P R + ++E + + ++ Sbjct: 121 VKLFQNGKALKACEAELSRPSAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRVEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E+N K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLGKSQKLREINFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIR-----------------TAYAETIPLG 279 N N ++F+N R + + I + + P Sbjct: 239 ISSE--AHYNKNMQFLFVNRRLILRTKLHKLIDFLLRKESIICKPKNGSASRQMTSNPRY 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS 334 R + + V+ ++ + DV + PAK+ I F+N + + ++ + K+ + Sbjct: 297 RSNPELHGIYVINMQCQFCEYDVCMDPAKTLIEFQNWDTPLVCVQEGVKMFLKKEKLFVE 356 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQEN 374 S D + + S +++ QE Sbjct: 357 LSGEDIKEFSEDNDFSFFNATLQKHVSSDEKGDQVSFQEA 396 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S T+ P I + E + L+ + Sbjct: 1218 LVLVDQHAAHERVRLEQLIIDSYEKQQPQGSGRKKLLSSTISPPLEISVTEEQRRLLRCY 1277 Query: 477 DEDLHRLGIKA--ERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 L LG++ + + + ++P +++ + + +R+ ++ Sbjct: 1278 HNSLEDLGLEILFPDTSDSLVLVGKVPLCFAEREANELRRGRATVTKSIVEEFIREQVEL 1337 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP Sbjct: 1338 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLEESCRLIEALSWCQLPFQCAHGRP 1397 Query: 579 TFIKLKLSDIEKL 591 + + L +D++ L Sbjct: 1398 SMLPL--ADMDHL 1408 >gi|322502987|emb|CBZ38071.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 840 Score = 183 bits (464), Expect = 9e-44, Method: Composition-based stats. Identities = 71/386 (18%), Positives = 147/386 (38%), Gaps = 61/386 (15%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L ++AAG++I + +KEL EN+LDA+++ V + G + D+G G Sbjct: 2 ITRLDGASARKLAAGQVITDLTSVVKELSENALDAKATTVTIRLINYGLDEIVVDDDGTG 61 Query: 63 MT--------SEEI------PMAVQR--------------HCTSKISDDFSNIH------ 88 ++ + E+ P+ R H T+K D Sbjct: 62 ISMGQLVNTAANELLDGASTPLLSSRATTKQRRHDRDGCTHATAKDEADEGQTSQAESAC 121 Query: 89 -----------TFGFRGEALPSIGAVSHLTLMSRPPQ-NNTGAQIAISGEKISSVRPVAM 136 + GFRGEAL S+ VS +T+ +R +I+ +S Sbjct: 122 VAEDEGDSSDPSLGFRGEALHSLAHVSDVTVETRSADTGALTVRISYDHTSHTSRLEAVR 181 Query: 137 ---NPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI--- 189 GT V R LF +P R ++K+ + + + + +++ A+++P + Sbjct: 182 LRDVCGTTVTARHLFKHLPVRHREYVKNCRKQLSKVASTMKQYAVSHPHIRLLMQHQETP 241 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNA-N 248 S + + +G+ +++ G ++ ++ + T G + + + Sbjct: 242 NSAVVTLVSLTGSGDATRSVTEAYGGLCTSHMQRVHWSLSFGTFAGLVSKVSGGGRLSGD 301 Query: 249 QFYVFINGRTVQDKFILSTIRTAYAETIPLGR---YPVVVLLLEIDPR-QVDVNVHPAKS 304 ++GR V + + A+ + +P + L ++ + Q DVN+ P K Sbjct: 302 HQVFALDGRLVDLPRLGKALNDAFIQCLPNASQRLHVAFFLQVKTNASLQYDVNLTPNKR 361 Query: 305 YIRFRNPTIIRNFIIQSIQKAINKKG 330 + + + + Q A+ + G Sbjct: 362 KVLLAQEERLADELY---QCALQEFG 384 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 6/187 (3%) Query: 407 GIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 Q + +II+ +G + +VDQHA+ E+ +E++ + + +T Q L+ P + + Sbjct: 651 MRVIGQFNHGFIIAVLPNGDVFVVDQHASDEKYNYERLVRAYEATP---QPLVMPVSVAM 707 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNA-IAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 E L +EH L + G K R + + + +P + + +++ +++ Sbjct: 708 SAHEVDLAVEHKLTLQQHGFKVSRGSDDTKLLVYSLPVLPYDVVSASDVMELVQQLVQYG 767 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL- 583 T + + +AT AC SI G + M +L + + C HGRPT L Sbjct: 768 TITKPLRAVWHSMATKACRSSIMIGTPLTVKRMKLILERLSQLDQPWNCPHGRPTLRLLC 827 Query: 584 KLSDIEK 590 ++D+++ Sbjct: 828 SIADLQR 834 >gi|74205421|dbj|BAE21026.1| unnamed protein product [Mus musculus] Length = 1411 Score = 182 bits (463), Expect = 1e-43, Method: Composition-based stats. Identities = 76/354 (21%), Positives = 139/354 (39%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR LS+ + ++ +G I ++EL NS+DAE + V + Q+ DNG G Sbjct: 2 IRCLSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEVTCVAIRV-NMETFQVQVIDNGLG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGA 119 M +++ R+ TSK D N +GFRGEAL SI ++ + + S+ Sbjct: 61 MAGDDVEKVGNRYFTSKCHSVRDLENPAFYGFRGEALASIADMAGAVEISSKKNTTLKTF 120 Query: 120 QIAISGEKISSVRPVAMNP---GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + + GT V V +LF+ P R + ++E + + ++ Sbjct: 121 VKMFQNGKALATHEADLTRPSVGTTVTVYNLFYQFPVRRKSMD-PRLEFEKVRQRVEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E+ K E GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEFSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIR-----------------TAYAETIPLG 279 N N ++F+N R V + I + + P Sbjct: 239 ISSE--AHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSSPRH 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 R + + V+ ++ + DV + PAK+ I F++ + I + +++ + + Sbjct: 297 RSASEPHGIYVINVQCPFCEYDVCIEPAKTLIEFQSWDTVLICIQEGVKRFLKQ 350 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S T++ P I + E + L+ + Sbjct: 1181 LVLVDQHAAHERIRLEQLITDSYEKQDPQSAGRKKLLSSTIIPPLAITVSEEQRRLLRSY 1240 Query: 477 DEDLHRLGIK--AERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 + L LG++ + I + ++P ++ + +L+R+ ++ Sbjct: 1241 HKHLEDLGLELLFPDASDSLILVGKVPLCFVEREASELRRGRSTVTKSIVEELIREQVEL 1300 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ ++ E RL+ + + QC HGRP Sbjct: 1301 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDRLSLEESCRLIEALSLSQLPFQCAHGRP 1360 Query: 579 TFIKLKLSDIEKL 591 + + L +D++ L Sbjct: 1361 SMLPL--ADLDHL 1371 >gi|297802396|ref|XP_002869082.1| hypothetical protein ARALYDRAFT_328199 [Arabidopsis lyrata subsp. lyrata] gi|297314918|gb|EFH45341.1| hypothetical protein ARALYDRAFT_328199 [Arabidopsis lyrata subsp. lyrata] Length = 1119 Score = 182 bits (463), Expect = 1e-43, Method: Composition-based stats. Identities = 74/336 (22%), Positives = 149/336 (44%), Gaps = 33/336 (9%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 MK I+ L E + + + +G I+ S ++E++ NSLDA +++V + S ++ D+ Sbjct: 1 MKTIKPLPEGVRHSMRSGIIMFDMSRVVEEIVFNSLDAGATKVSIFVGVVSCS-VKVVDD 59 Query: 60 GFGMTSEEIPMAVQRHCTSKISDDFSNIHT----FGFRGEALPSIGAVSHLTLMSRPPQN 115 G G++ +++ + +R+ TSK DF+N+ T FGFRGEAL SI +S L + ++ Sbjct: 60 GSGVSRDDLVLLGERYATSKFH-DFTNVETAGESFGFRGEALASISDISLLEVRTKAIGR 118 Query: 116 NTGAQIAISGEKISS--VRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVI 172 G + + G K + + GT V VRDLF++ P R ++ S + I + Sbjct: 119 PNGYRKVMKGSKCLHLGIDDDRKDSGTTVTVRDLFYSQPVRRKYMQSSPKKVLESIKKCV 178 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 R+A+ + VSF+ I+S+ ++ F + + G + +N+ ++N + Sbjct: 179 FRIALVHSNVSFSVLDIESDEELFQTNPSSSAF-SLLMRDAGTEAVNSLCKVNVTDGMLN 237 Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 + G+ + + R + P +L + Sbjct: 238 VSGFE--CADDWKPTDGQQTGRRNRLQSN--------------------PGYILCITCPR 275 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 + + P+K+++ F+ + I + + + K Sbjct: 276 HLYEFSFEPSKTHVEFKKWGPVLALIERIVLASWKK 311 Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats. Identities = 69/506 (13%), Positives = 163/506 (32%), Gaps = 62/506 (12%) Query: 114 QNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR 173 ++ G + S + + + + + F+ P+ + Q ++ +R Sbjct: 599 EDKVGREKYHSYVNVGNSVTGSFSLSSEW---SPMFSTPSATKWESDYQKGCRILERSLR 655 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 + P+ F+ + + +++ + I ++ + Sbjct: 656 LGRMPDPEFCFSAANNINFDHEVIPEMDCWKTGADSFTDIQNSIKSDEIFCKSSWEHAD- 714 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID-- 291 GI ++ + K R+A R+ + + + Sbjct: 715 --DVGIEQYSIRKDKF---SYGTQYHVGKQRSKRSRSAPPFCREKKRFISLSCISDTKSK 769 Query: 292 ------PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS---------- 335 P ++ P + I+ + I ++ ++ + + S+ Sbjct: 770 NSDPSEPDDLECLTQPCNASHMHLKCNILDDNIQETEKRLSSASDLKASAGCRTVHSETQ 829 Query: 336 --VLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 + S + D T ++ +++ ++ ++ S D+ S+++ Sbjct: 830 DEDGGEDFSSEENLDPIKSTTKWRHNCAVSQVGKESHELHDQDSVLDISSGLLHLRSDES 889 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 E + Q+ + YI + IVDQHAA ER+ E++R+ Sbjct: 890 LVPESINRHSLEDAKVLQQVDKKYIPIVACGTVAIVDQHAADERIRLEELRKK------- 942 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIK--AERFGPNA--------------IAI 497 L E L+ + E + G G + I + Sbjct: 943 ----------VLPEMGYQLLQSYAEQIRDWGWICNINVEGSTSFKKNMSIIQRKSTPITL 992 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 +P IL L + + ++ D+ + T+ + +L + AC G+I G + E Sbjct: 993 NAVPCILGVNLSDVDLLEFLQQLADTDGSSTIPPSVLRVLNSKACRGAIMFGDSLLPSEC 1052 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKL 583 + ++ +++ QC HGRPT + L Sbjct: 1053 SLIIDGLKQTSLCFQCAHGRPTTVPL 1078 >gi|281351439|gb|EFB27023.1| hypothetical protein PANDA_002680 [Ailuropoda melanoleuca] Length = 1454 Score = 182 bits (463), Expect = 1e-43, Method: Composition-based stats. Identities = 81/354 (22%), Positives = 140/354 (39%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NSLDAE+ V + Q+ DNG G Sbjct: 2 IKCLSVEVQARLRSGLAICSLGQCVEELALNSLDAEAKCVAVRV-NMETFQVQVIDNGLG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S++I R+ TSK + D N +GFRGEAL SI + S + + S+ + Sbjct: 61 MGSDDIDKVGNRYFTSKCNSIQDLENPRFYGFRGEALASIADMASAVEISSKKNRTGKTF 120 Query: 120 QIAISGEKISSVRPVAMN---PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ P R + ++E + I ++ Sbjct: 121 VKLFQNGKALKACEADLTRPSAGTTVTVYNLFYQFPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G ++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLAKSQKLRDIKFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIR-----------------TAYAETIPLG 279 N N ++F+N R + + I + P Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLILRTKLHKFIDFLLRKESIICKPKNGSAARQMNSSPRH 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 R + + V+ ++ + DV + PAK+ I F+N + I + ++ + K Sbjct: 297 RSNPELHGIYVVNMQCRFCEYDVCMEPAKTLIEFQNWDTVLVCIQEGVKMFLKK 350 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S + P I + E + L+ + Sbjct: 1219 LVLVDQHAAHERVRLEQLITDSYEKQQPQGSGRKKLLSSIVSPPLEIRVTEEQRRLLRCY 1278 Query: 477 DEDLHRLGIKAE--RFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 ++L LG++ + + + ++P ++ + + +R+ ++ Sbjct: 1279 HKNLEDLGLEIIFPDTSDSLVLVGKVPLCFVEREANELRRGRSPVTKSIVEEFIREQVEL 1338 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP Sbjct: 1339 LQTTGAIQGTLPLTVQKVLASQACHGAIKFNDGLSPEESCRLIEALSWCQLPFQCAHGRP 1398 Query: 579 TFIKLKLSDIEKL 591 + + L +DI+ L Sbjct: 1399 SMLPL--ADIDHL 1409 >gi|253577129|ref|ZP_04854450.1| DNA mismatch repair protein MutL [Paenibacillus sp. oral taxon 786 str. D14] gi|251843511|gb|EES71538.1| DNA mismatch repair protein MutL [Paenibacillus sp. oral taxon 786 str. D14] Length = 176 Score = 182 bits (462), Expect = 2e-43, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 3/175 (1%) Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 Q GL I+DQHAAHER+ +E + F SQ LL P ++ + A + E Sbjct: 2 QNDQGLYIIDQHAAHERVNYEYYYEKFGRPADASQELLIPITLEFTPSDSAKLQERLHWF 61 Query: 481 HRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 ++G+ E FG + P + ++ ++ + +++ ++ +TM Sbjct: 62 EQVGVVLEHFGGGTFRVVAHPYWFPQGEEASIIEEMAEWVLNERAIDL--AKLREASSTM 119 Query: 541 -ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +C SI++ +K+ E N LLR + C HGRP + D+EKLF R Sbjct: 120 VSCKASIKANQKLTPEEANTLLRRLAACKQPYTCPHGRPIIVSFSTYDLEKLFKR 174 >gi|119601617|gb|EAW81211.1| mutL homolog 3 (E. coli), isoform CRA_a [Homo sapiens] Length = 1445 Score = 182 bits (462), Expect = 2e-43, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 142/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK D N +GFRGEAL +I + S + + S+ + Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTV----------------------QDKFILSTIRTAYAE 274 N N ++F+N R V ++ + ++ Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSLRH 296 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + V+ ++ + DV + PAK+ I F+N + I + ++ + + Sbjct: 297 RSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVKMFLKQ 350 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 21/185 (11%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S TL+ P I + E + L+ + Sbjct: 1219 LVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCY 1278 Query: 477 DEDLHRLG--IKAERFGPNAIAIREIPAILSKKNIPQLLR-------DIIDEIIDSSTTY 527 ++L LG + + + ++P ++ +L R I++ + + Sbjct: 1279 HKNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVELLQTTGGIQ 1338 Query: 528 -TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP+ + L + Sbjct: 1339 GTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPL--A 1396 Query: 587 DIEKL 591 DI+ L Sbjct: 1397 DIDHL 1401 >gi|6689928|gb|AAF23904.1|AF195657_1 DNA mismatch repair protein [Homo sapiens] Length = 1429 Score = 182 bits (462), Expect = 2e-43, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 142/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK D N +GFRGEAL +I + S + + S+ + Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTV----------------------QDKFILSTIRTAYAE 274 N N ++F+N R V ++ + ++ Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSLRH 296 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + V+ ++ + DV + PAK+ I F+N + I + ++ + + Sbjct: 297 RSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVKMFLKQ 350 Score = 113 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 97/254 (38%), Gaps = 25/254 (9%) Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 S + Q +N + + D + + + Y IH ++ Sbjct: 1134 SSESLQSLFSEWDNPVFARYPEVAVDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQ 1193 Query: 421 QTTD----GLVIVDQHAAHERLIFEKMRQDFNS-TKITSQTLLTPEIIDLLEGECALIME 475 Q + L+ E +EK + + K+ S TL+ P I + E + L+ Sbjct: 1194 QVDNKFIACLMSTKTEENGEADSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1253 Query: 476 HDEDLHRLG--IKAERFGPNAIAIREIPAILSKKN---------------IPQLLRDIID 518 + ++L LG + + + ++P ++ + + +R+ ++ Sbjct: 1254 YHKNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLE 1313 Query: 519 EIIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGR Sbjct: 1314 LLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGR 1373 Query: 578 PTFIKLKLSDIEKL 591 P+ + L +DI+ L Sbjct: 1374 PSMLPL--ADIDHL 1385 >gi|62003157|gb|AAX59030.1| mutL 3 homolog (E.coli) [Homo sapiens] Length = 1429 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 142/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK D N +GFRGEAL +I + S + + S+ + Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTV----------------------QDKFILSTIRTAYAE 274 N N ++F+N R V ++ + ++ Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSLRH 296 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + V+ ++ + DV + PAK+ I F+N + I + ++ + + Sbjct: 297 RSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVKMFLKQ 350 Score = 113 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 97/254 (38%), Gaps = 25/254 (9%) Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 S + Q +N + + D + + + Y IH ++ Sbjct: 1134 SSESLQSLFSEWDNPVFARYPEVAVDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQ 1193 Query: 421 QTTD----GLVIVDQHAAHERLIFEKMRQDFNS-TKITSQTLLTPEIIDLLEGECALIME 475 Q + L+ E +EK + + K+ S TL+ P I + E + L+ Sbjct: 1194 QVDNKFIACLMSTKTEENGEADSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1253 Query: 476 HDEDLHRLG--IKAERFGPNAIAIREIPAILSKKN---------------IPQLLRDIID 518 + ++L LG + + + ++P ++ + + +R+ ++ Sbjct: 1254 YHKNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLE 1313 Query: 519 EIIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGR Sbjct: 1314 LLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGR 1373 Query: 578 PTFIKLKLSDIEKL 591 P+ + L +DI+ L Sbjct: 1374 PSMLPL--ADIDHL 1385 >gi|6689930|gb|AAF23905.1| DNA mismatch repair protein [Homo sapiens] gi|85567604|gb|AAI12168.1| MutL homolog 3 (E. coli) [Homo sapiens] gi|119601619|gb|EAW81213.1| mutL homolog 3 (E. coli), isoform CRA_c [Homo sapiens] gi|119601620|gb|EAW81214.1| mutL homolog 3 (E. coli), isoform CRA_c [Homo sapiens] gi|313883808|gb|ADR83390.1| mutL homolog 3 (E. coli) [synthetic construct] Length = 1429 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 142/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK D N +GFRGEAL +I + S + + S+ + Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTV----------------------QDKFILSTIRTAYAE 274 N N ++F+N R V ++ + ++ Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSLRH 296 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + V+ ++ + DV + PAK+ I F+N + I + ++ + + Sbjct: 297 RSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVKMFLKQ 350 Score = 113 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 97/254 (38%), Gaps = 25/254 (9%) Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 S + Q +N + + D + + + Y IH ++ Sbjct: 1134 SSESLQSLFSEWDNPVFARYPEVAVDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQ 1193 Query: 421 QTTD----GLVIVDQHAAHERLIFEKMRQDFNS-TKITSQTLLTPEIIDLLEGECALIME 475 Q + L+ E +EK + + K+ S TL+ P I + E + L+ Sbjct: 1194 QVDNKFIACLMSTKTEENGEADSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1253 Query: 476 HDEDLHRLG--IKAERFGPNAIAIREIPAILSKKN---------------IPQLLRDIID 518 + ++L LG + + + ++P ++ + + +R+ ++ Sbjct: 1254 YHKNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLE 1313 Query: 519 EIIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGR Sbjct: 1314 LLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGR 1373 Query: 578 PTFIKLKLSDIEKL 591 P+ + L +DI+ L Sbjct: 1374 PSMLPL--ADIDHL 1385 >gi|91992160|ref|NP_055196.2| DNA mismatch repair protein Mlh3 isoform 2 [Homo sapiens] Length = 1429 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 142/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK D N +GFRGEAL +I + S + + S+ + Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTV----------------------QDKFILSTIRTAYAE 274 N N ++F+N R V ++ + ++ Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSLRH 296 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + V+ ++ + DV + PAK+ I F+N + I + ++ + + Sbjct: 297 RSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVKMFLKQ 350 Score = 113 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 97/254 (38%), Gaps = 25/254 (9%) Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 S + Q +N + + D + + + Y IH ++ Sbjct: 1134 SSESLQSLFSEWDNPVFARYPEVAVDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQ 1193 Query: 421 QTTD----GLVIVDQHAAHERLIFEKMRQDFNS-TKITSQTLLTPEIIDLLEGECALIME 475 Q + L+ E +EK + + K+ S TL+ P I + E + L+ Sbjct: 1194 QVDNKFIACLMSTKTEENGEADSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1253 Query: 476 HDEDLHRLG--IKAERFGPNAIAIREIPAILSKKN---------------IPQLLRDIID 518 + ++L LG + + + ++P ++ + + +R+ ++ Sbjct: 1254 YHKNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLE 1313 Query: 519 EIIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGR Sbjct: 1314 LLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGR 1373 Query: 578 PTFIKLKLSDIEKL 591 P+ + L +DI+ L Sbjct: 1374 PSMLPL--ADIDHL 1385 >gi|114653980|ref|XP_001158435.1| PREDICTED: mutL homolog 3 isoform 2 [Pan troglodytes] gi|114653982|ref|XP_001158557.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 4 [Pan troglodytes] Length = 1427 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 142/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK D N +GFRGEAL +I + S + + S+ + Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTV----------------------QDKFILSTIRTAYAE 274 N N ++F+N R V ++ + ++ Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSLRH 296 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + V+ ++ + DV + PAK+ I F+N + I + ++ + + Sbjct: 297 RSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVKMFLKQ 350 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 99/254 (38%), Gaps = 25/254 (9%) Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 S + Q +N + + D + + + Y IH ++ Sbjct: 1132 SSESLQSLFSEWDNPVFARYPEVAVDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQ 1191 Query: 421 QTTD----GLVIVDQHAAHERLIFEKMRQDFNS-TKITSQTLLTPEIIDLLEGECALIME 475 Q + L+ E +EK + + K+ S TL+ P I + E + L+ Sbjct: 1192 QVDNKFIACLMSTKTEENGEADSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1251 Query: 476 HDEDLHRLGIKAE--RFGPNAIAIREIPAILSKKN---------------IPQLLRDIID 518 + ++L LG++ + + + ++P ++ + + +R+ ++ Sbjct: 1252 YHKNLEDLGLEFAFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLE 1311 Query: 519 EIIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGR Sbjct: 1312 LLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGR 1371 Query: 578 PTFIKLKLSDIEKL 591 P+ + L +DI+ L Sbjct: 1372 PSMLPL--ADIDHL 1383 >gi|156843763|ref|XP_001644947.1| hypothetical protein Kpol_1025p8 [Vanderwaltozyma polyspora DSM 70294] gi|156115601|gb|EDO17089.1| hypothetical protein Kpol_1025p8 [Vanderwaltozyma polyspora DSM 70294] Length = 633 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 77/368 (20%), Positives = 145/368 (39%), Gaps = 31/368 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAG--GGKSFFQITD 58 M I+ L++ ++I A + P AIKE+I+NS+DA + + I GG + + D Sbjct: 1 MTIQILNKDDQSKIVATSYVISPFTAIKEIIDNSIDAGAHNIRIEIDSKTGGCEYISVKD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAV----SHLTLMSRP 112 +G G+ + +IP+ R TSKI+ + T GFRG AL SI + L S+ Sbjct: 61 DGCGIDAADIPLVCIRGSTSKITQFSEIQTAKTLGFRGNALNSISNIMGSKGSLEFQSKT 120 Query: 113 PQNNTGAQIAISGE---KISSVRPVAMNPGTIVEVRDLFFTIPARL-NFLKSEQVETNLI 168 + G + + K V + GT V +R L ++ R + K + + + Sbjct: 121 SGDIIGQRWLVDKNGVVKDEKVSKINCAIGTTVIIRKLLASLHVRYIEYSKHSKTTIDDV 180 Query: 169 TDVIRRMAIAYPKVSFTFSTIK--------SNRYKMNFQSTNGNFPERISQVIGEDFINN 220 ++ + + ++ F F + R ++ + N + + + + + Sbjct: 181 KTLLHHYSTIFDEIRFQFFMVSLNRDGSVLERRLQVTTEPGISNCRKILKLIGIKAINKD 240 Query: 221 AV---ELNEKSNEITLQGYTGIPTFNRG----NANQFYVFINGRTVQDKFIL-STIRTAY 272 + E +N+I++ P ++ +N R + K + A Sbjct: 241 ILIVKENVRLNNDISVNLILPNPECANEILLSKKKCKFLTVNNRIMSLKLSFGKDLTKAL 300 Query: 273 AETIPLGRY--PVVVLL-LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 Y P L+ IDP +D+N+ P K+ I R +I + + I+ I + Sbjct: 301 NSAYKDSNYTLPKCWLVSFTIDPNVIDINIEPEKNDILLRQSGMIIDELKILIKSFIEEW 360 Query: 330 GISTSSVL 337 S Sbjct: 361 AASGEDTA 368 >gi|91992162|ref|NP_001035197.1| DNA mismatch repair protein Mlh3 isoform 1 [Homo sapiens] gi|317373417|sp|Q9UHC1|MLH3_HUMAN RecName: Full=DNA mismatch repair protein Mlh3; AltName: Full=MutL protein homolog 3 Length = 1453 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 142/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK D N +GFRGEAL +I + S + + S+ + Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTV----------------------QDKFILSTIRTAYAE 274 N N ++F+N R V ++ + ++ Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSLRH 296 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + V+ ++ + DV + PAK+ I F+N + I + ++ + + Sbjct: 297 RSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVKMFLKQ 350 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S TL+ P I + E + L+ + Sbjct: 1219 LVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCY 1278 Query: 477 DEDLHRLG--IKAERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 ++L LG + + + ++P ++ + + +R+ ++ Sbjct: 1279 HKNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLEL 1338 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP Sbjct: 1339 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRP 1398 Query: 579 TFIKLKLSDIEKL 591 + + L +DI+ L Sbjct: 1399 SMLPL--ADIDHL 1409 >gi|119601618|gb|EAW81212.1| mutL homolog 3 (E. coli), isoform CRA_b [Homo sapiens] gi|119601621|gb|EAW81215.1| mutL homolog 3 (E. coli), isoform CRA_b [Homo sapiens] Length = 1453 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 142/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK D N +GFRGEAL +I + S + + S+ + Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTV----------------------QDKFILSTIRTAYAE 274 N N ++F+N R V ++ + ++ Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSLRH 296 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + V+ ++ + DV + PAK+ I F+N + I + ++ + + Sbjct: 297 RSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVKMFLKQ 350 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S TL+ P I + E + L+ + Sbjct: 1219 LVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCY 1278 Query: 477 DEDLHRLG--IKAERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 ++L LG + + + ++P ++ + + +R+ ++ Sbjct: 1279 HKNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLEL 1338 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP Sbjct: 1339 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRP 1398 Query: 579 TFIKLKLSDIEKL 591 + + L +DI+ L Sbjct: 1399 SMLPL--ADIDHL 1409 >gi|7209866|dbj|BAA92353.1| DNA mismatch repair protein MLH3 [Homo sapiens] Length = 1453 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 142/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK D N +GFRGEAL +I + S + + S+ + Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTV----------------------QDKFILSTIRTAYAE 274 N N ++F+N R V ++ + ++ Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSLRH 296 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + V+ ++ + DV + PAK+ I F+N + I + ++ + + Sbjct: 297 RSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVKMFLKQ 350 Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S TL+ P I + E + L+ + Sbjct: 1219 LVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCY 1278 Query: 477 DEDLHRLG--IKAERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 ++L LG + + + ++P ++ + + +R+ ++ Sbjct: 1279 HKNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLEL 1338 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP Sbjct: 1339 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRP 1398 Query: 579 TFIKLKLSDIEKL 591 + + L +DI+ L Sbjct: 1399 SMLPL--ADIDHL 1409 >gi|114653974|ref|XP_001158381.1| PREDICTED: mutL homolog 3 isoform 1 [Pan troglodytes] gi|114653976|ref|XP_001158500.1| PREDICTED: mutL homolog 3 isoform 3 [Pan troglodytes] gi|114653978|ref|XP_001158621.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 5 [Pan troglodytes] Length = 1451 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 142/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK D N +GFRGEAL +I + S + + S+ + Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTV----------------------QDKFILSTIRTAYAE 274 N N ++F+N R V ++ + ++ Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSLRH 296 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + V+ ++ + DV + PAK+ I F+N + I + ++ + + Sbjct: 297 RSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVKMFLKQ 350 Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 90/193 (46%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S TL+ P I + E + L+ + Sbjct: 1217 LVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCY 1276 Query: 477 DEDLHRLGIKAE--RFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 ++L LG++ + + + ++P ++ + + +R+ ++ Sbjct: 1277 HKNLEDLGLEFAFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLEL 1336 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP Sbjct: 1337 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRP 1396 Query: 579 TFIKLKLSDIEKL 591 + + L +DI+ L Sbjct: 1397 SMLPL--ADIDHL 1407 >gi|2281332|gb|AAC45507.1| mismatch repair protein homolog [Lactococcus lactis subsp. cremoris MG1363] Length = 223 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 1/221 (0%) Query: 372 QENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 N + S + ++ + S+ + + AQ+H Y++ Q+ +GL +VDQ Sbjct: 4 SSNEFTDRTPKNSVSNFGVDFDNIEKLSQQSTFPQLEYLAQLHATYLLCQSKEGLYLVDQ 63 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG 491 HAA ER+ +E + + Q LL P + L + ++ E + LH G+ E +G Sbjct: 64 HAAQERIKYEYWKDKIGEVSMEQQILLAPYLFTLPTNDFIVLAEKKDLLHEAGVFLEEYG 123 Query: 492 PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRK 551 N +RE P L + I + + ++ID I+ SS ++L+ ++ A +AC SI++ Sbjct: 124 ENQFILREHPIWLKETEIEKSINEMIDIIL-SSKEFSLKKYRHDLAAMVACKSSIKANHP 182 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 + + LLRE+ N C HGRPT + DI+K+F Sbjct: 183 LDAESARALLRELSTCKNPYSCAHGRPTIVHFSGDDIQKMF 223 >gi|146100947|ref|XP_001468986.1| mismatch repair protein; mismatch repair protein PMS1 [Leishmania infantum] gi|134073355|emb|CAM72081.1| mismatch repair protein [Leishmania infantum JPCM5] Length = 840 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 71/386 (18%), Positives = 146/386 (37%), Gaps = 61/386 (15%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L ++AAG++I + +KEL EN+LDA+++ V + G + D+G G Sbjct: 2 ITRLDGASARKLAAGQVITDLTSVVKELSENALDAKATTVTIRLINYGLDEIVVDDDGTG 61 Query: 63 MT--------SEEI------PMAVQR--------------HCTSKISDDFSNIH------ 88 ++ + E+ P+ R H T+K D Sbjct: 62 ISMGQLVNTAANELLDGASTPLLSSRATTKQRRHDRDGCTHATAKDEADEGQTSQAESAC 121 Query: 89 -----------TFGFRGEALPSIGAVSHLTLMSRPPQ-NNTGAQIAISGEKISSVRPVAM 136 + GFRGEAL S+ VS +T+ +R +I+ +S Sbjct: 122 VAEDEGDSSDPSLGFRGEALHSLAHVSDVTVETRSADTGALTVRISYDHTSHTSRLEAVR 181 Query: 137 ---NPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI--- 189 GT V R LF +P R ++K+ + + + + +++ A+++P + Sbjct: 182 LRDVCGTTVTARHLFKHLPVRHREYVKNCRKQLSKVASTMKQYAVSHPHIRLLVQHQETP 241 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNA-N 248 S + + +G+ +++ G ++ ++ + T G + + Sbjct: 242 NSAVVTLVSLTGSGDATRSVTEAYGGLCTSHMQRVHWSLSFGTFTGLVSKVSGGGRLSGG 301 Query: 249 QFYVFINGRTVQDKFILSTIRTAYAETIPLGR---YPVVVLLLEIDPR-QVDVNVHPAKS 304 ++GR V + + A+ + +P + L ++ + Q DVN+ P K Sbjct: 302 HQVFALDGRLVDLPRLGKALNDAFIQCLPNASQRLHVAFFLQVKTNASLQYDVNLTPNKR 361 Query: 305 YIRFRNPTIIRNFIIQSIQKAINKKG 330 + + + + Q A+ + G Sbjct: 362 KVLLAQEERLADELY---QCALQEFG 384 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 6/187 (3%) Query: 407 GIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL 465 Q + +II+ +G + +VDQHA+ E+ +E++ + + +T Q L+ P + + Sbjct: 651 MRVIGQFNHGFIIAVLPNGDVFVVDQHASDEKYNYERLVRAYEATP---QPLVMPVSVAM 707 Query: 466 LEGECALIMEHDEDLHRLGIKAERFGPNA-IAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 E L +EH L + G K R + + + +P + + +++ +++ Sbjct: 708 SAHEVDLAVEHKLTLQQHGFKVSRGSDDTKLLVYSLPVLPYDVVSASDVMELVQQLVQYG 767 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL- 583 T + + +AT AC SI G + M +L + + C HGRPT L Sbjct: 768 TITKPLRAVWHSMATKACRSSIMIGTPLTVKRMKLILERLSQLDQPWNCPHGRPTLRLLC 827 Query: 584 KLSDIEK 590 ++D+++ Sbjct: 828 SIADLQR 834 >gi|302509070|ref|XP_003016495.1| hypothetical protein ARB_04784 [Arthroderma benhamiae CBS 112371] gi|291180065|gb|EFE35850.1| hypothetical protein ARB_04784 [Arthroderma benhamiae CBS 112371] Length = 1020 Score = 181 bits (459), Expect = 3e-43, Method: Composition-based stats. Identities = 85/394 (21%), Positives = 146/394 (37%), Gaps = 30/394 (7%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPS 99 V+ G ++ DNG G++ +H TSK+S D +++ TFGFRGEAL S Sbjct: 6 VDVRFKNNGLDLIEVQDNGHGISPNNYESLALKHYTSKLSTFADLTSLQTFGFRGEALSS 65 Query: 100 IGAVSHLTLMSRPPQNNTGAQ--IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF 157 + AVS+LT+++ Q A K+ S + VA GT V + +LF +P R Sbjct: 66 LCAVSNLTVVTAEAQQAPRASKLDFEFSGKLKSTQVVAGQKGTTVSIENLFKPLPVRRRE 125 Query: 158 -LKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIG 214 K+ + E + ++ A V F + +T N E IS V G Sbjct: 126 LEKNVKREYGKVIALLHAYACISTGVRFNVKNQMPKGKSVVVFTTKSNPTTRENISNVYG 185 Query: 215 EDFINNAVE----------------LNEKSNEITLQGYTGIPTF--NRGNANQFYVFING 256 + + ++ SN+I + G+ P F R ++ F+N Sbjct: 186 TKTLLALMPLDLNLEYEPSTVAKRFSSQASNKIFVHGHISKPVFGEGRQTPDRQMFFVNS 245 Query: 257 RTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRN 316 R I Y L + P + E+D DVNV P K I + + Sbjct: 246 RPCGLPQIAKAFNEVYKSF-NLSQSPFIFANFEMDTSAYDVNVSPDKRTILLHDAGALIE 304 Query: 317 FIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL 376 + + ++ + + + ++ Q S+ TQ+K Sbjct: 305 SL----KASLTELFENEDQTVPVSQLTFSKQSQLTPNRGQTPPASVGATQDKPEEPPGNA 360 Query: 377 STNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC 410 + L DD + +P + S+++ + Sbjct: 361 VYSQELGQDDTVEENNPEPTQTSQSSIRGVLQRL 394 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 78/206 (37%), Gaps = 45/206 (21%) Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 Q D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I+++ Sbjct: 777 AEQEQDELFIIDQHASDEKYNFERLQ---AETTVQNQRLVKPKTLDLTAVEEEVIIDNLA 833 Query: 479 DLHRLGIKAE-------RFGPNAIAIREIP----AILSKKNIPQLL-------------- 513 L + G E G I +P + +++ +L+ Sbjct: 834 ALEKNGFIVEIDTSGDEPIGRRCKLI-SLPLSKEVVFDTRDLEELIVLLSEAPQQSQNNL 892 Query: 514 ----RDIIDEIIDSSTTY------------TLQDRIENILATMACYGSIRSGRKMQSIEM 557 RD +D + ++ + A AC SI G+ + +M Sbjct: 893 GKRARDELDSDAEHIEPPGVASSPFSDYLVPRPSKVRKMFAMRACRSSIMIGKNLTHRQM 952 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKL 583 +++ M C HGRPT L Sbjct: 953 ETVVKHMGTIDKPWNCPHGRPTMRHL 978 >gi|197100348|ref|NP_001124874.1| DNA mismatch repair protein Mlh3 [Pongo abelii] gi|55726207|emb|CAH89876.1| hypothetical protein [Pongo abelii] Length = 1273 Score = 181 bits (458), Expect = 4e-43, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 141/354 (39%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK D N +GFRGEAL +I + S + + S+ + Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQSGKALKACEADVTRPSAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDICSRFCQIYGLGKSQKLREISFKYKEFELGGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTI----------------------RTAYAE 274 N N ++F+N R V + I ++ Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGSTSRQMNSSLRH 296 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + V+ ++ + DV + PAK+ I F++ + I + ++ + + Sbjct: 297 RSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQDWDTLLFCIQEGVKMFLKQ 350 Score = 103 bits (258), Expect = 7e-20, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 66/167 (39%), Gaps = 20/167 (11%) Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG--IKAERFGPNAIAIREI 500 + LT +D++ L + ++L LG + + + ++ Sbjct: 1067 FIAPTEDIQAACTKDLTTVAVDVVLENDYLFRCYHKNLEDLGLEFVFPDSSDSLVLVGKV 1126 Query: 501 PAILSKKN---------------IPQLLRDIIDEIIDSSTTY-TLQDRIENILATMACYG 544 P ++ + + +R+ ++ + + TL ++ +LA+ AC+G Sbjct: 1127 PLCFVEREANELRRGRSTVTKSIVEEFIREQVELLQTTGGIQGTLPLTVQKVLASQACHG 1186 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 +I+ + E RL+ + QC HGRP+ + L +DI+ L Sbjct: 1187 AIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPL--ADIDHL 1231 >gi|332223313|ref|XP_003260811.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 2 [Nomascus leucogenys] Length = 1429 Score = 180 bits (457), Expect = 6e-43, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 142/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK D N +GFRGEAL +I + S + + S+ + Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQSGKALKACEADVTRPSAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTV----------------------QDKFILSTIRTAYAE 274 N N ++F+N R V ++ + ++ Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLVDFLLRKESIICKPKNGSTSRQMNSSLRH 296 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + V+ ++ + DV + PAK+ I F+N + I + ++ + + Sbjct: 297 RSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVKMFLKQ 350 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 77/175 (44%), Gaps = 21/175 (12%) Query: 436 ERLIFEKMRQDFNS-TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG--IKAERFGP 492 E +EK + + K+ S TL+ P I + E + L+ + ++L LG Sbjct: 1213 EADSYEKHQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCYHKNLEDLGLEFVFPDTSD 1272 Query: 493 NAIAIREIPAILSKKN---------------IPQLLRDIIDEIIDSSTTY-TLQDRIENI 536 + + + ++P ++ + + +R+ ++ + + TL ++ + Sbjct: 1273 SLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQVELLQTTGGIQGTLPLTVQKV 1332 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 LA+ AC+G+I+ + E RL+ + QC HGRP+ + L +DI+ L Sbjct: 1333 LASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPL--ADIDHL 1385 >gi|332223311|ref|XP_003260810.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 1 [Nomascus leucogenys] Length = 1453 Score = 180 bits (456), Expect = 6e-43, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 142/354 (40%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK D N +GFRGEAL +I + S + + S+ + Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQSGKALKACEADVTRPSAGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K E L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLGKSQKLREISFKYKEFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTV----------------------QDKFILSTIRTAYAE 274 N N ++F+N R V ++ + ++ Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLVDFLLRKESIICKPKNGSTSRQMNSSLRH 296 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + V+ ++ + DV + PAK+ I F+N + I + ++ + + Sbjct: 297 RSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVKMFLKQ 350 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S TL+ P I + E + L+ + Sbjct: 1219 LVLVDQHAAHERIRLEQLIIDSYEKHQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCY 1278 Query: 477 DEDLHRLG--IKAERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 ++L LG + + + ++P ++ + + +R+ ++ Sbjct: 1279 HKNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQVEL 1338 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP Sbjct: 1339 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRP 1398 Query: 579 TFIKLKLSDIEKL 591 + + L +DI+ L Sbjct: 1399 SMLPL--ADIDHL 1409 >gi|322495411|emb|CBZ30715.1| mismatch repair protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 840 Score = 180 bits (456), Expect = 7e-43, Method: Composition-based stats. Identities = 77/425 (18%), Positives = 157/425 (36%), Gaps = 63/425 (14%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L ++AAG++I + +KEL EN+LDA+++ V + G + D+G G Sbjct: 2 ITRLDGASARKLAAGQVITDLTSVVKELSENALDAKATTVTIRLINYGLDEIVVDDDGTG 61 Query: 63 MTSEEI--------------PMAVQRHCTSKISDDFSNIH-------------------- 88 ++ ++ P+ R T + D + Sbjct: 62 ISMGQLVDTATNELLDGASTPLLSSRATTKQRRHDLDSCSHATATNEANEGHTNQAESAC 121 Query: 89 -----------TFGFRGEALPSIGAVSHLTLMSRPPQ-NNTGAQIAISGEKISSVRPVAM 136 + GFRGEAL S+ VS +T+ +R +I+ +S Sbjct: 122 MAPDEGDSSDPSLGFRGEALHSLAHVSDVTIETRSADTGALTVRISYDHISHTSRLEAVQ 181 Query: 137 ---NPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI--- 189 GT V R LF +P R ++K+ + + + T +++ A+++P + Sbjct: 182 LRDVCGTTVTARHLFKHLPVRHREYVKNCRKQLSKATSTMKQYAVSHPHIRLLMQHQETP 241 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNA-N 248 S + + +G+ +++ G ++ +N + T G + + + Sbjct: 242 NSAVVTLVSLTGSGDATRSVTEAYGGLCTSHMQRVNWNLSFGTFTGLVSKVSGGGRLSGD 301 Query: 249 QFYVFINGRTVQDKFILSTIRTAYAETIPLGR---YPVVVLLLEIDP-RQVDVNVHPAKS 304 ++GR V + + A+ + +P + L ++ + Q DVN+ P K Sbjct: 302 HQVFALDGRLVDLPRLGKALNDAFTQCLPNASQRLHVAFFLQVKTNALLQYDVNLAPNKR 361 Query: 305 YIRFRNP----TIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK-THLPKYA 359 + + +Q A+ + + +++ ++ K T P A Sbjct: 362 KVLLAQEERLADEVYQCALQEFGSALQEVDLDRGQRIAQTRVADVRATELTKLTRTPVSA 421 Query: 360 TSLTN 364 TSLT Sbjct: 422 TSLTQ 426 Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 6/192 (3%) Query: 400 EATHYQLGIACAQIHQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLL 458 ++ Q + +II+ +G + +VDQHA+ E+ +E++ + + +T Q L+ Sbjct: 644 NKNSFKEMRVIGQFNHGFIIAVLPNGDVFVVDQHASDEKYNYERLVRAYEATP---QPLV 700 Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA-IAIREIPAILSKKNIPQLLRDII 517 P + + E L +EH L G K R + + + +P + + +++ Sbjct: 701 MPVPVAMSAHEVDLAVEHKLALQHHGFKVSRGSDDTKLLVYSLPVLPYDVVSASDVMELV 760 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 +++ T + + +AT AC SI G + M +L + + C HGR Sbjct: 761 QQLVQYGTITKPLRAVWHSMATKACRSSIMIGTPLTVKRMKLILERLSQLDQPWNCPHGR 820 Query: 578 PTFIKL-KLSDI 588 PT L ++D+ Sbjct: 821 PTLRLLCNIADL 832 >gi|326470128|gb|EGD94137.1| DNA mismatch repair protein MutL [Trichophyton tonsurans CBS 112818] Length = 726 Score = 179 bits (455), Expect = 8e-43, Method: Composition-based stats. Identities = 79/390 (20%), Positives = 148/390 (37%), Gaps = 35/390 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L E + I + + S +KEL++++LDA ++ + I+ Q+ DNG Sbjct: 1 MPIVALEEPAVRAIGSTSALSDSSSVVKELLDSALDAGATSIFLEISHNTLDIIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNI--HTFGFRGEALPSIGAVSH-LTLMSRPPQN 115 G+ + +A +R+ TSKI +D N+ + GFRG+AL I +SH + + +R + Sbjct: 61 SGILPSDRSLACKRNYTSKIQTKEDLKNVGGKSLGFRGQALARIAEMSHAVHITTRVLEE 120 Query: 116 NTG-AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIR 173 + S P + GT V V + ++P R K I +++ Sbjct: 121 QVARTVKFGRDGEPISETPASHPIGTTVRVCNFLQSLPVRRQEAEKKSTKSILAIKKLLQ 180 Query: 174 RMAIAYPKVSFTFSTIK-SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN--- 229 AIA PK + +K + + S + + + ISQ+IG I++ + LN Sbjct: 181 GYAIARPKTRLSMRLLKSKEQDWIYAPSPSPSARDAISQIIGSTVISSCISLNSCHPVTR 240 Query: 230 ---------------EITLQGYTGIPTFNRGNANQ--FYVFINGRT-VQDKFILSTIRTA 271 I + P + N N +V ++ R + + + Sbjct: 241 GRDSSDSVIEGHDTLTIHVSVVVPKPAAGKFNINHKGQFVIVDTRPLLTCRGFGKEVFKL 300 Query: 272 YAETIPLG------RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKA 325 + P + L L+ P D N+ P+K I F + + + I Sbjct: 301 FKSYYKTAVDSTRLEDPFMFLSLDCPPGIYDANIEPSKDDIVFEDNRAVLHIIESVFMDI 360 Query: 326 INKKGISTSSVLSKKMISSFHQDNAPKTHL 355 + + + + + + D + Sbjct: 361 YSPETSTITPTPDTRQSNQLTVDISSPAST 390 >gi|46108566|ref|XP_381341.1| hypothetical protein FG01165.1 [Gibberella zeae PH-1] Length = 937 Score = 179 bits (455), Expect = 8e-43, Method: Composition-based stats. Identities = 85/424 (20%), Positives = 156/424 (36%), Gaps = 34/424 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I +L +++ + + P IKEL++NS+D+ ++ +E IA Q+ DNG Sbjct: 1 MSISQLPPSSAHRLRSSHQLPDPLSVIKELVDNSIDSGATSIEITIAPNTVDKIQVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+ E+ R TSKI D+ T GFRGEAL S + + + +R Q+ Sbjct: 61 SGIQIEDFRFLGCRSHTSKIRNYDELHQNGGKTLGFRGEALASATETAAIKITTRTAQDP 120 Query: 117 TGAQIAISGEK--ISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIR 173 + + + + IS +PV+ GT V+ +LF R +K+ + I ++ Sbjct: 121 IASLLMLKAKTGGISKKQPVSGTIGTTVQATNLFDKFTVRKQNAIKTSRRSLVEIQRLLE 180 Query: 174 RMAIAYPK--VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN-- 229 AIA P +SF S+ + + + + E I+Q+ G VE++ SN Sbjct: 181 SYAIAIPHLKISFKVSSPSTQSWSYSPCPP-SSTQEAITQIFGHTLAAQLVEVSSDSNVE 239 Query: 230 ---------EITLQGYTGIPTFNRGNANQFYVFI--NGRTVQDKFILSTIRTAYAETIPL 278 + + P + FI + R + + ++ Sbjct: 240 CGSTGVQLGTLRITALLPRPGSDVQVIKGKGAFISVDSRPISSIRSTGKKLVSVFKSSIS 299 Query: 279 GRY-----------PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 + P + + ++ P D NV K + F N + + Sbjct: 300 KIFGSPDSSRAPANPFLQISIQCPPGSYDPNVSQLKDEVMFDNEPAVISCFQALCDAIYV 359 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 KK + + +K M + A + E+ S +DL+ + Sbjct: 360 KKVPGSKGMQNKTMPAENTPTPTAGALKAPKANGGEGRFQNRNGHESLSSDHDLIEPLND 419 Query: 388 TYSE 391 + Sbjct: 420 EFER 423 >gi|20334706|gb|AAM16278.1| MutL-like protein 3 [Mus musculus] Length = 338 Score = 179 bits (455), Expect = 8e-43, Method: Composition-based stats. Identities = 74/340 (21%), Positives = 132/340 (38%), Gaps = 33/340 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR LS+ + ++ +G I ++EL NS+DAE++ V + Q+ DNG G Sbjct: 2 IRCLSDDVKTKLRSGLAISSLGQCVEELTLNSIDAEATCVAIRV-NMETFQVQVIDNGLG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGA 119 M +++ R+ TSK D N +GFRGEAL SI ++ + + S+ Sbjct: 61 MAGDDVEKVGNRYFTSKCHSVRDLENPAFYGFRGEALASIADMAGAVEISSKKNTTLKTF 120 Query: 120 QIAISGEKISSVRPVAMNP---GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + + GT V V +LF+ P R + ++E + + ++ Sbjct: 121 VKMFQNGKALATHEADLTRPSVGTTVTVYNLFYQFPVRRKSMD-PRLEFEKVRQRVEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E+ K E GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDICSRFCQIYGLGKSQKLREIRFKYKEFEFSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIR-----------------TAYAETIPLG 279 N N ++F+N R V + I + + P Sbjct: 239 ISSE--AHYNKNMQFLFVNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSSPRH 296 Query: 280 R-----YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 R + + V+ ++ + DV + PAK+ I ++ + Sbjct: 297 RSASELHGIYVINVQCPFCEYDVCIEPAKTLIELQSWDTV 336 >gi|296421050|ref|XP_002840079.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636291|emb|CAZ84270.1| unnamed protein product [Tuber melanosporum] Length = 608 Score = 179 bits (455), Expect = 9e-43, Method: Composition-based stats. Identities = 80/420 (19%), Positives = 158/420 (37%), Gaps = 47/420 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + + + +G+++ P IKEL++NSLDA ++ + ++ Q+ DNG Sbjct: 1 MGIQALPDTAVRALGSGQVLTDPVSLIKELLDNSLDALATAISIEVSQNTLDVLQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRG-EALPSIGAVSHLTLMSRPPQNNT 117 G+ +E+ RHCTSKI+D + + + GFRG + L + + Sbjct: 61 HGIPTEDREFVAMRHCTSKITDFEEIQDCRSLGFRGEALASAAELAGGLVITTMVEGEKV 120 Query: 118 GAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRM 175 K+++ +PV GT V V D F +P R +K Q + + +++R Sbjct: 121 AMACTCDRVGKVTARKPVGAMKGTTVRVTDFFKFLPVRRENAIKGAQKSLSKVRTLLQRY 180 Query: 176 AIAYPKVSFTFSTIKSNRYKMNF--------QSTNGNFPERISQVIGEDFINNAVELNEK 227 +++P F+ + + + + + E + + +G++ + +N + Sbjct: 181 YLSHPACRFSLRVLAPPQKSKAAGGQSEDIVYAPSKSVSEAVMKAVGKEIVATCQWINTE 240 Query: 228 S---------NEITLQGYTGIPTF--NRGNANQFYV---FINGRTVQD-KFILSTIRTAY 272 +I ++ + P F++ R V + L I + Y Sbjct: 241 HEEVTDGSGEQKIGIEAFMPKPGSDPAIICRKPQCTNFVFVDSRPVSCARGTLKQILSLY 300 Query: 273 AETIPLG------RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 + P + L L P D N+ PAK + F + + + + Sbjct: 301 KSYLKSALPDSAISDPFLYLNLRCPPGAYDPNIEPAKDDVMFFHADRVIGAVEVIFKGLY 360 Query: 327 NKKGISTSSVLSKKMISSFH-------------QDNAPKTHLPKYATSLTNTQEKLFLQE 373 + +S S S +D P T P A + +E++ Q+ Sbjct: 361 GELKTKSSPGGSGGKGKSVEMMTGGFELLLARKRDPKPGTTKPPEAPEIDEDEEEMAAQQ 420 >gi|72547643|ref|XP_843271.1| mismatch repair protein [Leishmania major strain Friedlin] gi|323363786|emb|CBZ12792.1| mismatch repair protein [Leishmania major strain Friedlin] Length = 840 Score = 179 bits (454), Expect = 1e-42, Method: Composition-based stats. Identities = 79/425 (18%), Positives = 158/425 (37%), Gaps = 63/425 (14%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L ++AAG++I + +KEL EN+LDA+++ V + G + D+G G Sbjct: 2 ITRLDGASARKLAAGQVITDLTSVVKELSENALDAKATTVTIRLINYGLDEIVVDDDGTG 61 Query: 63 MT--------SEEI------PMAVQR--------------HCTSKISDDFSNIH------ 88 ++ + E+ P+ R H T+K D Sbjct: 62 ISMGQLVNTAANELLDGASTPLLSSRATTKQRRHDLDGCTHATAKDEADEGRTSQDESAC 121 Query: 89 -----------TFGFRGEALPSIGAVSHLTLMSRPPQ-NNTGAQIAISGEKISSVRPVAM 136 + GFRGEAL S+ +S +T+ +R +I+ +S Sbjct: 122 VAEAEGDSSDPSLGFRGEALHSLAHMSDVTVETRSADTGALTVRISYDHTSHTSRLEAVR 181 Query: 137 ---NPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI--- 189 GT V R LF P R ++K+ + + + T +++ A+++P + Sbjct: 182 LRDVCGTTVTARHLFKHFPVRHREYVKNCRKQLSKATSTMKQYAVSHPHIRLLMQHQETP 241 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI-PTFNRGNAN 248 S + + +G+ +++ G ++ ++ + T G R +++ Sbjct: 242 NSAVVTLVSLTGSGDATRSVTEAYGGLCTSHMQRVHWSLSFGTFTGLVSKVSGGGRLSSD 301 Query: 249 QFYVFINGRTVQDKFILSTIRTAYAETIPLGR---YPVVVLLLEIDPR-QVDVNVHPAKS 304 ++GR V + + A+ + +P Y L ++ + Q DVN+ P K Sbjct: 302 HQVFALDGRLVDLPRLGKALNDAFIQCLPNASQRLYVAFFLQVKRNASLQYDVNLTPNKR 361 Query: 305 YIRFRNP----TIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK-THLPKYA 359 + + +Q A+ + + +++ + + T P A Sbjct: 362 KVLLAQEERLADEVYQCALQEFGSALQEVDLDRGQRIAQTRAADVRATELTRLTRTPVSA 421 Query: 360 TSLTN 364 TSLT Sbjct: 422 TSLTQ 426 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 87/227 (38%), Gaps = 5/227 (2%) Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 + + T D S +D ++ Q + +I Sbjct: 603 REPFSADPADAVVLSASTQTCDRPSSRTLGAQTADDLNHYFTKNSFKEMRVIGQFNHGFI 662 Query: 419 ISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 I+ +G + +VDQHA+ E+ +E++ + + +T Q L+ P + + E L +EH Sbjct: 663 IAVLPNGDVFVVDQHASDEKYNYERLVRAYEATP---QPLVMPVSVAMSAHEVDLAVEHK 719 Query: 478 EDLHRLGIKAERFGPNA-IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L G K R + + + +P + + +++ +++ T + + Sbjct: 720 LALQHHGFKVSRGSDDTKLLVYSLPVLPYDVVSASDVMELVQQLVQYGTITKPLRAVWHS 779 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 +AT AC SI G + M +L + + C HGRPT L Sbjct: 780 MATKACRSSIMIGTPLTVKRMKLILERLSQLDQPWNCPHGRPTLRLL 826 >gi|147794209|emb|CAN77833.1| hypothetical protein VITISV_024732 [Vitis vinifera] Length = 494 Score = 179 bits (454), Expect = 1e-42, Method: Composition-based stats. Identities = 46/108 (42%), Positives = 73/108 (67%), Gaps = 2/108 (1%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 +L + ++N IAAGE+I+RP A+KEL+ENSL+ S+ + ++ GG Q++D+G G+ Sbjct: 274 HRLDQSVVNCIAAGEVIQRPVSAVKELVENSLNTYSTSINVIVKDGGLKLIQVSDDGHGI 333 Query: 64 TSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLM 109 E++P+ +RH TSK+S +D +I GFRGEAL S+ V H+T+ Sbjct: 334 RYEDLPILCKRHTTSKLSEFEDLQSIKLMGFRGEALASMTYVGHVTVT 381 >gi|109084340|ref|XP_001096911.1| PREDICTED: DNA mismatch repair protein Mlh3 isoform 2 [Macaca mulatta] Length = 1456 Score = 179 bits (454), Expect = 1e-42, Method: Composition-based stats. Identities = 78/354 (22%), Positives = 141/354 (39%), Gaps = 33/354 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS ++ ++ +G I ++EL NS+DAE+ V + Q+ DNGFG Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRV-NMETFQVQVIDNGFG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGA 119 M S+++ R+ TSK D N +GFRGEAL +I + S + + S+ + Sbjct: 61 MGSDDVEKVGNRYFTSKCHSVQDLENPRFYGFRGEALANIADMASAVEISSKKNRTMKTF 120 Query: 120 QIAISGEKISSVRPVAMNP---GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K + GT V V +LF+ +P R + ++E + I ++ Sbjct: 121 VKLFQSGKALKACEADVTRPSGGTTVTVYNLFYQLPVRRKCMD-PRLEFEKVRQRIEALS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P +SF+ S + + R Q+ G E++ K + L GY Sbjct: 180 LMHPSISFSLRNDVSGSMVLQL-PKTKDVCSRFCQIYGLGKSQKLREISFKYKQFELSGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTI----------------------RTAYAE 274 N N ++F+N R V + I ++ Sbjct: 239 ISSE--AHYNKNMQFLFVNKRLVLRTKLHKLIDFLLRKESIICKPKNGSTSRQMSSSLRH 296 Query: 275 TIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 Y + V+ ++ + DV + PAK+ I F+N + I + ++ + + Sbjct: 297 RSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVKMFLKQ 350 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 90/193 (46%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S TL+ P I + E + L+ + Sbjct: 1222 LVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCY 1281 Query: 477 DEDLHRLGIK--AERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 ++L LG++ + + + ++P ++ + + +R+ ++ Sbjct: 1282 HKNLEDLGLELVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQVEL 1341 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP Sbjct: 1342 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIETLSSCQLPFQCAHGRP 1401 Query: 579 TFIKLKLSDIEKL 591 + + L +DI+ L Sbjct: 1402 SMLPL--ADIDHL 1412 >gi|111308043|gb|AAI21227.1| pms1 protein [Xenopus (Silurana) tropicalis] Length = 141 Score = 179 bits (454), Expect = 1e-42, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 2/115 (1%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 L I +++ ++I +KEL+EN+LDA ++ +E + G ++ DNG G+ Sbjct: 2 HCLPSATIRLLSSSQVITSVVSVVKELVENALDANATSIEIKLENFGFDKIEVRDNGKGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 S++ P+ +H TSKI DD + T+GFRGEAL SI +V+ + + ++ +++ Sbjct: 62 KSDDTPVMGVKHYTSKINSHDDLETLETYGFRGEALASICSVAEVHIATKTLEDD 116 >gi|310128480|ref|XP_003120597.1| PREDICTED: mismatch repair endonuclease PMS2-like isoform 2, partial [Homo sapiens] Length = 674 Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats. Identities = 71/309 (22%), Positives = 122/309 (39%), Gaps = 27/309 (8%) Query: 46 IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV 103 + G +++DNG G+ E +H TSKI + D + + TFGFRGEAL S+ A+ Sbjct: 11 LKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCAL 70 Query: 104 SHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSE 161 S +T+ + G ++ KI P GT V V+ LF T+P R F ++ Sbjct: 71 SDVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNI 130 Query: 162 QVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFIN 219 + E + V+ I + + + + T G + E I V G+ + Sbjct: 131 KKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQ 190 Query: 220 NAVELNE------------------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTV 259 + + + N + G+ T G + ++ + FIN R Sbjct: 191 SLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPC 250 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 + + Y +YP VVL + +D VD+NV P K I + ++ + Sbjct: 251 DPAKVCRLVNEVYHMY-NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLK 309 Query: 320 QSIQKAINK 328 S+ + Sbjct: 310 TSLIGMFDS 318 >gi|194378162|dbj|BAG57831.1| unnamed protein product [Homo sapiens] Length = 815 Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats. Identities = 71/310 (22%), Positives = 122/310 (39%), Gaps = 27/310 (8%) Query: 45 VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGA 102 + G +++DNG G+ E +H TSKI + D + + TFGFRGEAL S+ A Sbjct: 10 KLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCA 69 Query: 103 VSHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKS 160 +S +T+ + G ++ KI P GT V V+ LF T+P R F ++ Sbjct: 70 LSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRN 129 Query: 161 EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFI 218 + E + V+ I + + + + T G + E I V G+ + Sbjct: 130 IKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQL 189 Query: 219 NNAVELNE------------------KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRT 258 + + + N + G+ T G + ++ + FIN R Sbjct: 190 QSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRP 249 Query: 259 VQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI 318 + + Y +YP VVL + +D VD+NV P K I + ++ + Sbjct: 250 CDPAKVCRLVNEVYHMY-NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVL 308 Query: 319 IQSIQKAINK 328 S+ + Sbjct: 309 KTSLIGMFDS 318 Score = 149 bits (377), Expect = 9e-34, Method: Composition-based stats. Identities = 62/351 (17%), Positives = 135/351 (38%), Gaps = 14/351 (3%) Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDV 297 G + A+ + V + ++++ + P+ ++ Sbjct: 465 GSHCSSEYAASSPGDRGSQEHVDSQEKAPKTDDSFSDVDCHSNQEDTGCKFRVLPQPTNL 524 Query: 298 NVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPK 357 + RF+ I+ + + I + ++ ++ K+ + + L K Sbjct: 525 ---ATPNTKRFKKEEILSSS-DICQKLVITQDMSASQVDVAVKINKKVVPLDFSMSSLAK 580 Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 L + ++ ++N + + +E ++ +E T + Q + + Sbjct: 581 RIKQLHHEAQQSEGEQNYRKFRAKICPGENQAAE-DELRKEISKTMFAEMEIIGQFNLGF 639 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 II++ + + IVDQHA E+ FE ++Q T + Q L P+ ++L A+++E+ Sbjct: 640 IITKLNEDIFIVDQHATDEKYNFEMLQQH---TVLQGQRLTAPQTLNLTAVNEAVLIENL 696 Query: 478 EDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 E + G A I +P + PQ + ++I + DS R Sbjct: 697 EIFRKNGFDFVIDENAPVTERAKLI-SLPTSKNWTFGPQDVDELIFMLSDSPGVMCRPSR 755 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ + A+ AC S+ G + + EM +L+ M + + C HGRPT + Sbjct: 756 VKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHI 806 >gi|156400212|ref|XP_001638894.1| predicted protein [Nematostella vectensis] gi|156226018|gb|EDO46831.1| predicted protein [Nematostella vectensis] Length = 337 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 145/340 (42%), Gaps = 33/340 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L I + + +G I + AI EL+ N+LDA +S + + Q++DNG G Sbjct: 2 IRHLDTGIRSHLRSGVAISTLTQAIDELVTNALDAGASCINVHVDIPSF-RVQVSDNGSG 60 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGA 119 +T + + + QR+CTSK D + ++GFRGEAL SI + L ++++ + Sbjct: 61 ITKDNLEILGQRYCTSKCHSLSDLRKLSSYGFRGEALASIRDICGVLEIVTKHSSSYKTY 120 Query: 120 QIAISGEK---ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 K ++ N GT V + D+F +P R L S ++ + + +A Sbjct: 121 CKLFRSGKPLTVTQSCFPRSNTGTTVTIHDIFSNLPVRRKLLSSV-LDFERVRQRLLSIA 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P+VSF + + + + + SQ+ G + ++ + + G+ Sbjct: 180 LIHPEVSFILFNDATFQKCLQTR-KCLSVTSTFSQLFGNLKARSLKDVFSEHKHFKVSGH 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYP-------------- 282 GI + N N +V+IN R + I + + +++ + + P Sbjct: 239 IGIEPHH--NKNLQFVYINSRLLLKTKIHKLLNSMLSKSSFIKQLPSNMSENDVPMRSPP 296 Query: 283 --------VVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 + ++ + DV + P+K+ + F++ + Sbjct: 297 QRSSEKNAIFIINITCPLMVYDVILEPSKTLVEFQDWDGV 336 >gi|296777693|gb|ADH43110.1| DNA mismatch repair protein MutL [uncultured bacterium MID12] Length = 97 Score = 178 bits (451), Expect = 3e-42, Method: Composition-based stats. Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 2/95 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI +L E + NQIAAGE+IERP+ +KEL+ENS+DA SS++ I G Q+TDNG Sbjct: 3 KIIELPEVLANQIAAGEVIERPASVVKELVENSIDAGSSQITIEIEEAGLKKIQVTDNGE 62 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRG 94 G+ +++ +++ RH TSKI + D I T GFRG Sbjct: 63 GIAQDDVALSLHRHATSKIKNQADLFRIRTLGFRG 97 >gi|326920823|ref|XP_003206667.1| PREDICTED: DNA mismatch repair protein Mlh3-like [Meleagris gallopavo] Length = 1234 Score = 177 bits (450), Expect = 3e-42, Method: Composition-based stats. Identities = 83/401 (20%), Positives = 160/401 (39%), Gaps = 38/401 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L+E + ++ +G + ++EL+ NS+DA+++ V + Q+ DNG G Sbjct: 2 IKHLAEDVQARLRSGVAVTSLGQCVEELVFNSIDAKATCVAVRVDLEAFK-IQVVDNGSG 60 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVS----HLTLMSRPPQNN 116 M E++ +R+ TSK S D + +GFRGEAL SI ++ + S+ + Sbjct: 61 MGREDLSKMGKRYFTSKCSSVADLEKLTFYGFRGEALASIANMASVVEVSSKSSKTAKTF 120 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 ++ + GT V V +LF +P R + +E + + ++ Sbjct: 121 VKLFHNGHALEVCEAELSRPSGGTTVTVCNLFHQLPVRRRCMDPV-LEFERVRQKVEAIS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + +P VS + S + T + R Q+ G E+ KS + GY Sbjct: 180 LMHPSVSLSLRNDISCSMVLQLPKTR-DVYSRFCQIYGLGRSQKLREIKHKSGGFEISGY 238 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIR---------------------TAYAET 275 N N ++++N R V + I ++ Sbjct: 239 ISTE--GHYNKNMQFLYVNRRLVLKTRLHKLIDFLLRKESVICKAKSVPVSRQGSSSPGR 296 Query: 276 IPLG--RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 + G Y + VL + + DV++ PAK+ I F+N ++ + + ++ + ++ + Sbjct: 297 LRCGPELYGIFVLNVTCAYSEYDVSLEPAKTLIEFQNWDVLLACVEEGVKMFLKREHLFV 356 Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQEN 374 + I F++DN H + + E +QEN Sbjct: 357 EP--CCEDIREFNEDNNFCLH--NAPVTKSTLPEDKSIQEN 393 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 71/386 (18%), Positives = 138/386 (35%), Gaps = 43/386 (11%) Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLL--LEIDPRQV 295 G P + N++ F + ++ P +P + + V Sbjct: 828 GDPRDDLRNSDWLQDFDA--LLGKTVYINKTTGLSTYNTPPEEFPAACIKDLTTMAVNVV 885 Query: 296 DVN-----VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 N HP +S I R + Q + S + M+S + Sbjct: 886 SENGFQCRCHPFRSEIVLPFLPRPRKEKTLASQDQRGRASFPGHSESLQSMLSEWDNPVF 945 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC 410 + P+ A +TN Q EN + + ++ + + Sbjct: 946 VRC--PEIAVDVTNGQ-----AENLAVKIHNILYPYRFTKDMIHSMQVLQQVDNKFIACV 998 Query: 411 AQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT--------SQTLLTPEI 462 + + LV+VDQHAAHER+ E++ D + S ++ P Sbjct: 999 INTRNEMDKKEGGNLLVLVDQHAAHERIRLEQLIADSYEKEAAACGKKKFLSSSVSPPLE 1058 Query: 463 IDLLEGECALIMEHDEDLHRLGIKAE-RFGPNAIAIREIPAILSKKNIPQL--------- 512 I++ E + ++ ++L LG++ N I ++++P +++ +L Sbjct: 1059 IEVTEEQRRILWCCYKNLKDLGLELSFPEINNLILVKKVPLCFTEREANELRRKRQPVNK 1118 Query: 513 --LRDIIDEIIDS-----STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 + + I E ++ T+ +LA+ AC+G+I+ + S E RL+ + Sbjct: 1119 SIVEEFIKEQVELVQTTGGARGTMPLTFLKVLASQACHGAIKFNDSLTSEESCRLMEALS 1178 Query: 566 KNPNSSQCNHGRPTFIKLKLSDIEKL 591 QC HGRP+ + L +DI+ L Sbjct: 1179 SCQLPFQCAHGRPSMMPL--ADIDHL 1202 >gi|328855348|gb|EGG04475.1| hypothetical protein MELLADRAFT_37375 [Melampsora larici-populina 98AG31] Length = 448 Score = 177 bits (448), Expect = 6e-42, Method: Composition-based stats. Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 7/229 (3%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTS 65 + ++++ + +++ A+KEL+ENSLDA ++ VE G ++ DNG G+ Sbjct: 1 IDLNSVHKLTSSQVVIDLQTAVKELLENSLDAGANAVEIRFKEYGLDGLEVIDNGTGIPE 60 Query: 66 EEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ-NNTGAQIA 122 +++ H TSK++ +D + TFGFRGEAL S+ +S + L + + G + Sbjct: 61 QDLATVGLNHHTSKLTTFEDLGQLKTFGFRGEALSSLCGLSKVKLQTSTSETEPRGWAVD 120 Query: 123 ISG-EKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAYP 180 ++S + + + GT + + +LF+ +P R F K + +++ + Sbjct: 121 FDKLGNVTSKKICSRSRGTTIGISELFYPLPVRQKQFAKDYKKHFAQAQTLLQAYGLIST 180 Query: 181 KVSFTFSTIKSNRYKMNFQST--NGNFPERISQVIGEDFINNAVELNEK 227 ++ K+ T NGN + S + ++LN + Sbjct: 181 SLTLKVYNQPGKGGKVAQFQTRSNGNLRQNFSDIFTAKAAATVIDLNLE 229 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 12/185 (6%) Query: 403 HYQLGIACAQIHQNYIISQ-TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 + Q + +II + ++IVDQHA+ E+ FE++++ TK++ Q LLTP Sbjct: 259 DFANMKIIGQFNLGFIIVGLGEEDVLIVDQHASDEKYNFERLQR---DTKLSGQRLLTPR 315 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDI 516 +DL E MEH + L G G + + P P + Sbjct: 316 TLDLPAAEELTAMEHRDLLEMNGFGILIDEDAPVGQR-VKLVAQPVSRDTIWGPSGMSFC 374 Query: 517 IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHG 576 + + + + + A+ AC S+ G + + +M +L M C HG Sbjct: 375 LCSL--TGAPPLRPSKTRKMFASRACRSSVMIGDSLTTGQMRSILDHMGMMEEPWACPHG 432 Query: 577 RPTFI 581 RPT Sbjct: 433 RPTMR 437 >gi|301015759|pdb|3GAB|A Chain A, C-Terminal Domain Of Bacillus Subtilis Mutl Crystal Form I gi|301015760|pdb|3GAB|B Chain B, C-Terminal Domain Of Bacillus Subtilis Mutl Crystal Form I gi|301015761|pdb|3GAB|C Chain C, C-Terminal Domain Of Bacillus Subtilis Mutl Crystal Form I gi|301015762|pdb|3GAB|D Chain D, C-Terminal Domain Of Bacillus Subtilis Mutl Crystal Form I gi|301015825|pdb|3KDG|A Chain A, C-Terminal Domain Of Bacillus Subtilis Mutl Crystal Form Ii gi|301015826|pdb|3KDG|B Chain B, C-Terminal Domain Of Bacillus Subtilis Mutl Crystal Form Ii gi|301015827|pdb|3KDK|A Chain A, Structure Of The C-Terminal Domain Of Bacillus Subtilis Mutl Bound To Zn2+ gi|301015828|pdb|3KDK|B Chain B, Structure Of The C-Terminal Domain Of Bacillus Subtilis Mutl Bound To Zn2+ Length = 197 Score = 176 bits (446), Expect = 1e-41, Method: Composition-based stats. Identities = 57/188 (30%), Positives = 97/188 (51%), Gaps = 1/188 (0%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q+H YI++Q +GL I+DQHAA ER+ +E R+ + Q ++ P Sbjct: 9 MYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREKVGEVEPEVQEMIVPLTFHYS 68 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTT 526 E +I +H ++L +G+ E FG N+ +R PA K +L+ +II +++DS Sbjct: 69 TNEALIIEQHKQELESVGVFLESFGSNSYIVRCHPAWFPKGEEAELIEEIIQQVLDSKNI 128 Query: 527 YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 ++ E M+C GSI++ R +++ E+ LL ++ + C HGRP I Sbjct: 129 D-IKKLREEAAIMMSCKGSIKANRHLRNDEIKALLDDLRSTSDPFTCPHGRPIIIHHSTY 187 Query: 587 DIEKLFGR 594 ++EK+F R Sbjct: 188 EMEKMFKR 195 >gi|74706071|sp|O95744|PM2P2_HUMAN RecName: Full=Putative postmeiotic segregation increased 2-like protein 2; AltName: Full=Postmeiotic segregation increased 2-like protein 14; AltName: Full=Postmeiotic segregation increased protein 4; AltName: Full=Putative postmeiotic segregation increased 2 pseudogene 2 gi|4239952|dbj|BAA74754.1| PMS2L14 [Homo sapiens] Length = 297 Score = 176 bits (445), Expect = 1e-41, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 7/183 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+K+++ NSLDA ++ ++ + G +++ NG G Sbjct: 77 IKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIEVSGNGCG 136 Query: 63 MTSEEIP---MAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 + E ++ +H TSKI + D + + TFGF+G+AL S+ A+S +T+ + Sbjct: 137 VEEENFEGLSLSALKHHTSKIREFADLTRVETFGFQGKALSSLCALSDVTISTCHVSAKV 196 Query: 118 GAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRM 175 G ++ + KI P GT V V+ LF T+P R F ++ + + R Sbjct: 197 GTRLVFDHDGKIIKKTPYPHPRGTTVSVKQLFSTLPVRHKEFQRNIKKKRACFPFAFCRD 256 Query: 176 AIA 178 Sbjct: 257 CQF 259 >gi|308806882|ref|XP_003080752.1| suppressor of forked protein family protein / SUF family protein (ISS) [Ostreococcus tauri] gi|116059213|emb|CAL54920.1| suppressor of forked protein family protein / SUF family protein (ISS) [Ostreococcus tauri] Length = 1661 Score = 176 bits (445), Expect = 1e-41, Method: Composition-based stats. Identities = 104/641 (16%), Positives = 212/641 (33%), Gaps = 89/641 (13%) Query: 15 AAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQ--ITDNGFGMTSE---EIP 69 A+ +I+ + A+K N+LDA + + + G + D+G GMT E E+ Sbjct: 13 ASTRLIQIVARAVK----NALDARARTISVEV--GVRDVITMLCADDGEGMTRESARELV 66 Query: 70 MAV------QRHCTSKISDDFSNIHTFGFRGEALPSI-GAVSHLTLMSRPPQN-NTGAQI 121 A R T + + RG AL +I + + +R T Sbjct: 67 WAFGEPNGAARGATRQANR---------RRGRALSTIVAQCERVEIATRANNECETTTIR 117 Query: 122 AISGEKISSVRPVAMNPG-TIVEVRDLFFTIPARLNFLKSEQVETNL---ITDVIRRMAI 177 A + T V+ +F + + + L + ++ + Sbjct: 118 ATRAAGVECGSGAFDEKWSTTVKCVGVFAANSIAAARTREDVRKGALERELKSIVFHACL 177 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--AVELNEKSNEITLQG 235 P++S +++ + + + + G++ + V+ + + ++G Sbjct: 178 LRPELSMNVIMNGRAVERVS--GDRESVLDGLRRAYGDEVVGWLRMVDYESEDAKWRVRG 235 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQ---DKFILSTIRTAYAETIPLG------RYPVVVL 286 Y G+++ V++NG + D IR + G YP ++ Sbjct: 236 YVTPADRRLGSSDMQLVYVNGDHIIGKVDALHREMIRIEADAFLGDGARNAGKGYPGFLI 295 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQK---------------------- 324 ++ +V P+++ I F + + + + Q+I Sbjct: 296 AIDCPDDSYEVTYDPSRTLIEFDDWDTMFSHLRQAIVHEQCWPIREEPSSEKEPSPQEPP 355 Query: 325 --AINKKGISTSSVLSKKMISSFHQDNAPKTHLP-KYATSLTNTQEKLFLQENRLSTNDL 381 + + S +S + + N P + ++ SL + N + Sbjct: 356 PPVLRRGTFSQTSKRERCDDACCVSTNGPFSRAMLRHRNSLDSAPPVPHPSIMETWINPV 415 Query: 382 LPSDDPTYSEDNDPVEES--------EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHA 433 + + S E + Q+ + +IIS D +V DQHA Sbjct: 416 FDAPEVPILTIEKTPSNSRLRAPATLERAALEKARVIDQVGKKFIISTVDDCIVAFDQHA 475 Query: 434 AHERLIFEKMRQDFNSTKITSQTLLTPEI----IDLLEGECALIMEHDEDLHRLGIKAER 489 ER+ E++ + T T + E + + ++ R G + Sbjct: 476 CDERIGLEELWATILNPNKHVPTQETKSPALWATPMSVNEFDALENNAHNVRRWGWDWKT 535 Query: 490 FGPNA------IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR-IENILATMAC 542 I + +P I LR + E+ +S++ T R + +LA+ AC Sbjct: 536 DDGGNGKQETMIYLTRVPTIRGTTLGGDALRQYLYELTSTSSSSTHAPRPLHRLLASKAC 595 Query: 543 YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 G+I G + E +++ + C HGRPT L Sbjct: 596 RGAIMFGDTLNPHECECIIKALRLTQMPFACAHGRPTCAPL 636 >gi|119631289|gb|EAX10884.1| PMS1 postmeiotic segregation increased 1 (S. cerevisiae), isoform CRA_b [Homo sapiens] Length = 164 Score = 174 bits (441), Expect = 4e-41, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 2/123 (1%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS 124 + Sbjct: 122 VLD 124 >gi|54038365|gb|AAH84548.1| PMS1 protein [Homo sapiens] Length = 165 Score = 174 bits (441), Expect = 4e-41, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 2/123 (1%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS 124 + Sbjct: 122 VLD 124 >gi|30582733|gb|AAP35593.1| PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Homo sapiens] Length = 166 Score = 174 bits (441), Expect = 4e-41, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 2/123 (1%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS 124 + Sbjct: 122 VLD 124 >gi|30584133|gb|AAP36315.1| Homo sapiens PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [synthetic construct] gi|33303755|gb|AAQ02391.1| PMS1 postmeiotic segregation increased 1 [synthetic construct] Length = 167 Score = 174 bits (441), Expect = 4e-41, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 2/123 (1%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA ++ V+ + G ++ DNG G+ Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + + P+ ++ TSKI +D N+ T+GFRGEAL SI ++ + + +R +N Q Sbjct: 62 KAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADNFSTQY 121 Query: 122 AIS 124 + Sbjct: 122 VLD 124 >gi|290979276|ref|XP_002672360.1| predicted protein [Naegleria gruberi] gi|284085936|gb|EFC39616.1| predicted protein [Naegleria gruberi] Length = 397 Score = 174 bits (440), Expect = 4e-41, Method: Composition-based stats. Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 9/233 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I KLS I++I +G++I + IKELIENSLDA S+ +E G +++DNG G Sbjct: 166 ISKLSNNSIHRICSGQVIISLTSVIKELIENSLDASSTFIEIKFTNMGLECIEVSDNGNG 225 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 ++ V++H TSK+ + D NI TFGFRGEAL SI ++ L + ++ + G Sbjct: 226 ISKNNFENIVKKHNTSKLINFTDLENISTFGFRGEALSSISCMAELQIFTKTESDKLGNL 285 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 I ++ + ++ + F + + I I P Sbjct: 286 IYYDHDQNITKIEQLLHNYVSIFGLKDFKKL--QKVDFIQNDPHFIKINGFISL-----P 338 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 + S+ +N + + + I ++F N + Sbjct: 339 EKGCGRSSNDRQFLYVNNRPVDLPKITKCINEIYKEFNRNQYPIFIYMKMNHQ 391 >gi|239611066|gb|EEQ88053.1| DNA mismatch repair protein [Ajellomyces dermatitidis ER-3] Length = 843 Score = 174 bits (440), Expect = 5e-41, Method: Composition-based stats. Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 9/235 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + + I P +KELI+NSLDA ++ + ++ + DNG Sbjct: 1 MSIAHLPPDTARAVRSTSAISDPCSLVKELIDNSLDAGATYISVEVSANTLDTIHVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGA-VSHLTLMSRPPQN 115 G+ + + +R CTSK+ DD NI T GFRGEAL S + + ++ Sbjct: 61 VGIHPNDRHLVCKRSCTSKLQTIDDLKNIGGSTLGFRGEALASAAEMCGSIAITTKVAGE 120 Query: 116 NTG-AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIR 173 G + S A GT V + + +P R KS N + V+ Sbjct: 121 MVGETLKYDRTGLLVSCTKAAHPTGTAVRISEFLKLVPVRKQIALKSAPKTLNQMKKVLN 180 Query: 174 RMAIAYPKV--SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE 226 ++ P++ SF KS+ + + N + +V+G + I+ + Sbjct: 181 AYVLSRPEIRLSFKILKTKSDSSWVYASTENATVSTAMLRVVGAEAISQCTTITW 235 >gi|171680331|ref|XP_001905111.1| hypothetical protein [Podospora anserina S mat+] gi|170939792|emb|CAP65018.1| unnamed protein product [Podospora anserina S mat+] Length = 431 Score = 173 bits (439), Expect = 7e-41, Method: Composition-based stats. Identities = 62/348 (17%), Positives = 119/348 (34%), Gaps = 34/348 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + +I + I + +KEL++N+LD+ + + I+ ++ DNG Sbjct: 1 MPITPLPDDACRRIGSTLNITSTFMVLKELLDNALDSGAQTIHISISPNTVDKIEVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G++S + + TSK+S +D I + GFRG AL SI V+ + +++R Sbjct: 61 SGISSFDFNALGRPSHTSKLSSFEDIDKIGGKSLGFRGTALASINTVATVHVITRVGLET 120 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE---QVETNLITDVIR 173 + + A GT V V ++F P R + + +++ Sbjct: 121 PQMIRLADNGGVETQSVHAAEQGTTVTVTNIFSNYPVRERIARKPVEISKNIEKMRYLVQ 180 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNG-NFPERISQVIGEDFINNAVELNEKSNEIT 232 A A + F+ +++ + G + E Q+ G + Sbjct: 181 ACAFARHPLRIHFAVLQNPNQSLRISPHPGKDIMETAIQIFGVQKASQCFVRTWPDRPDP 240 Query: 233 LQGYTG--------------IPTF-NRGNANQFYVFINGRTVQDKFILS---------TI 268 G G P + + ++ R + + Sbjct: 241 NTGLPGEERSRRHVFQAILMKPDVEHSKIPKGLFFSVDSRPISATRGTGRKLTMALRECL 300 Query: 269 RTAYAETIPLG--RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 R + G + + L + DVN+ PAK + F + Sbjct: 301 RQSVCPLTSAGVPKDIFICLNICCSLGWYDVNIEPAKEDVLFLQEDQL 348 >gi|289671317|ref|ZP_06492392.1| DNA mismatch repair protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 127 Score = 173 bits (438), Expect = 8e-41, Method: Composition-based stats. Identities = 46/124 (37%), Positives = 74/124 (59%) Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 + L LG + R GP ++ +R IPA+L+ LLRD++ ++ + + + Sbjct: 2 DTAEREADTLATLGFEITRAGPQSLHVRSIPALLASAEPEALLRDVLGDLREHGQSRRIA 61 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 + +L+TMAC+G++R+ R++ EMN LLR+ME S QCNHGRPT+ + LSDI++ Sbjct: 62 SARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATERSGQCNHGRPTWARFTLSDIDR 121 Query: 591 LFGR 594 F R Sbjct: 122 WFLR 125 >gi|289665670|ref|ZP_06487251.1| DNA mismatch repair protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 126 Score = 173 bits (438), Expect = 9e-41, Method: Composition-based stats. Identities = 46/124 (37%), Positives = 74/124 (59%) Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 + L LG + R GP ++ +R IPA+L+ LLRD++ ++ + + + Sbjct: 1 DTAEREADTLATLGFEITRAGPQSLHVRSIPALLASAEPEALLRDVLGDLREHGQSRRIA 60 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 + +L+TMAC+G++R+ R++ EMN LLR+ME S QCNHGRPT+ + LSDI++ Sbjct: 61 SARDELLSTMACHGAVRANRRLTVPEMNALLRDMEATERSGQCNHGRPTWARFTLSDIDR 120 Query: 591 LFGR 594 F R Sbjct: 121 WFLR 124 >gi|31873629|emb|CAD97782.1| hypothetical protein [Homo sapiens] Length = 185 Score = 172 bits (435), Expect = 2e-40, Method: Composition-based stats. Identities = 39/103 (37%), Positives = 64/103 (62%), Gaps = 2/103 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 82 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 141 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAV 103 + E +H TSKI + D + + TFGFRGEAL S+ A+ Sbjct: 142 VEEENFEGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCAL 184 >gi|294932553|ref|XP_002780330.1| dna mismatch repair protein pms2, putative [Perkinsus marinus ATCC 50983] gi|239890252|gb|EER12125.1| dna mismatch repair protein pms2, putative [Perkinsus marinus ATCC 50983] Length = 483 Score = 171 bits (433), Expect = 3e-40, Method: Composition-based stats. Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 17/224 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L+ +++ I A +++ S +KEL+ENSLDA + + + G ++D+G G Sbjct: 13 ISSLTRDVVDSICAAQVVTSLSQCVKELLENSLDAGARNITVTLVNNGVDMIAVSDDGCG 72 Query: 63 MTSEEIPMAVQRHCTSKI------SDDFSNIHT-FGFRGEALPSIGAVSH--LTLMSRPP 113 ++ E H TSK+ +D+ H+ FGFRGEAL ++ +S+ +T+++R Sbjct: 73 VSEENWSTLCSWHATSKVDIVESRTDELRLGHSDFGFRGEALAAMCGLSNGGVTVLTRTE 132 Query: 114 QNNTGAQIAISGEKISSVRPVAMNP----GTIVEVRDLFFTIPAR-LNFLKSEQVETNLI 168 + + +K + GT V +R LF +P R F ++ + + Sbjct: 133 DSKAETGKVLVYDKTGRLSSSDGEAARGVGTTVTIRGLFRGLPVRLREFERNAKKQVTAT 192 Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQV 212 +++ A+ V+F + + + + I +V Sbjct: 193 VGLMQAYAVIRHDVAFRLTCDGR---SLLATNPEDDMETAIRKV 233 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 112/281 (39%), Gaps = 22/281 (7%) Query: 312 TIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFL 371 + + A+ + ++ + + + + ++ +T + K ++ ++ + + Sbjct: 187 KQVTATVGLMQAYAVIRHDVAFRLTCDGRSLLATNPEDDMETAIRKVSSPGNVGRKLMKI 246 Query: 372 QENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG-LVIVD 430 ++ + + + + +E ++ Q ++ +II+ L I+D Sbjct: 247 SSSQEDSGNEEFDEGTNATFHVKLGKE----DFEAMRVIGQFNKGFIITALEGRWLFILD 302 Query: 431 QHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF 490 QHA E+ IFE + ++++ SQ ++ P + L + I ++ G + F Sbjct: 303 QHACDEKTIFETL---NKTSELKSQPMIVPVRLSLPPPLESCIRGSRREIEACGFRF-NF 358 Query: 491 GPNA-----IAIRE--IPAILSKKNIPQLLRDIIDEIIDSSTTYTL-QDRIENILATMAC 542 +A + + + + L + IP S+ + L R+ ++LA+ AC Sbjct: 359 DDDAPIGSRVQLTSLGVASGLGFERIPS-----ASLFWSSALGHCLRPPRVWSMLASRAC 413 Query: 543 YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 +I G + +M ++R+M C HGRPT L Sbjct: 414 RTAIMIGDSLSRKKMEGVVRKMAALNQPWNCPHGRPTMRLL 454 >gi|330801903|ref|XP_003288962.1| hypothetical protein DICPUDRAFT_153264 [Dictyostelium purpureum] gi|325080993|gb|EGC34526.1| hypothetical protein DICPUDRAFT_153264 [Dictyostelium purpureum] Length = 1482 Score = 171 bits (433), Expect = 3e-40, Method: Composition-based stats. Identities = 91/441 (20%), Positives = 171/441 (38%), Gaps = 42/441 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+KL E + ++ + +I AI+E++ NS+DA+++ + I +F ++ DNGFG Sbjct: 20 IKKLEEDVSLKVRSSAVIVSLEQAIEEIVFNSIDAQATSIVISINLSNLTF-EVKDNGFG 78 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ---NNT 117 + + CTSKI+ D ++ TFG+RGE+L S+ VS+L ++S T Sbjct: 79 INYGNFKTIGEHSCTSKINKLTDLKSLSTFGYRGESLASLSDVSNLDIVSTSNNNTVQKT 138 Query: 118 GAQIAISGEKISSVRPVAMNP----GTIVEVRDLFFTIPARLN--FLKSEQVETNLITDV 171 K + N GT+V+VRDLF P R F + ++ ++ Sbjct: 139 FNFGKCEQFKTIDSQDSIHNKPISNGTVVKVRDLFKNFPVRRQNLFHPNLKLILKKRIEI 198 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQ---STNGNFPERISQVIGEDFINNAVELNEKS 228 I A+++P + F+ + + S F Q + E Sbjct: 199 I---ALSFPNIRFSVYDETKSLNILKTPKDTSFMSYFKHFYGQEMANKLEFIVSEGFPNE 255 Query: 229 NEITLQGYTGIPT-FNRGNANQFYVFINGRTVQDKFILSTIRTAYAET------------ 275 L GY P N + Y ++N R V + + I Y + Sbjct: 256 KSFYLSGYVSSPQKKGHPNKSFQYFYLNNRIVLNTKLHRHINQLYHKFRLFNATRRAHAN 315 Query: 276 ---IPLGR----YPVVVLLLEIDPRQVDVNVHP-AKSYIRFRNPTIIRNFIIQSIQKAIN 327 IP P+ +L L+ + + + P +K+++ F + I I K + Sbjct: 316 TSKIPKKEVIDSNPIFILFLKCSQLEYERSYEPSSKTFLEFNDWKKPLGEIQNVITKFLT 375 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + + + + +S D + + + S+++ L+EN DL + + Sbjct: 376 RFRENDTLLYEN---NSKRSDPSSALDVSIFEDSISDDVNNSQLEENEEDGFDLGYNKND 432 Query: 388 TYSEDNDPVEESEATHYQLGI 408 +E ++ E + Sbjct: 433 DNNEGDNYRENQGFADFFQDE 453 Score = 132 bits (332), Expect = 2e-28, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 79/193 (40%), Gaps = 3/193 (1%) Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM-RQDFNSTK 451 E + Q + +++ + ++++DQHA ER+ E + ++ F K Sbjct: 1266 QKCQEIIPREMLKDFKFITQWDKKFLVCEANGIVLVLDQHAVSERIKLETLEKKYFGENK 1325 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + L E L+ + ++L G + R P +I I ++P Sbjct: 1326 FDLCPMPERSRWSLTAYELELMKIYSKNLEDWGFEW-RSNPTSITILQVPMFCLVGLGVN 1384 Query: 512 LLRDIIDEIIDS-STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 LR+ + + ++ + T ILA+ AC +I+ G + +LL ++ + Sbjct: 1385 DLREFLYLLENNKGSPSTKPPAAHRILASKACRTAIKFGHNLTKEVCIKLLEDLNECNIP 1444 Query: 571 SQCNHGRPTFIKL 583 QC HGRP+ I L Sbjct: 1445 FQCAHGRPSIIPL 1457 >gi|50726320|dbj|BAD33895.1| DNA mismatch repair protein -like [Oryza sativa Japonica Group] Length = 1249 Score = 171 bits (433), Expect = 3e-40, Method: Composition-based stats. Identities = 69/338 (20%), Positives = 144/338 (42%), Gaps = 34/338 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I++L + + + + + ++ S ++ELI+ S++A + + ++ D+G Sbjct: 110 TIKRLPKSVHSSLRSSIVLFDLSRVVEELIDISVNARA------------CYVKVEDDGC 157 Query: 62 GMTSEEIPMAVQRHCTSKISD---DFS-NIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+T +E+ + +++ TSK + D + +FG GEAL S+ +S + + ++ Sbjct: 158 GITRDELVLVGEKYATSKFHNVMVDGEPSSRSFGLNGEALASLSDISVVEVRTKARGRPN 217 Query: 118 GAQIAISGEKISSVRPVAMNP--GTIVEVRDLFFTIPARL-NFLKSEQVETNLITDVIRR 174 I G K S + GT V VR+LF+ P R S + E +L+ + R Sbjct: 218 SYCKIIKGSKCSHLGIDEQREVVGTTVIVRELFYNQPVRRKQMQSSYKRELHLVKKSVLR 277 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 +A+ +P+VS I+S + ++ P +S ++G++ + E+ L Sbjct: 278 VALIHPQVSLRLFDIESEDELLYTIPSSSPLP-LVSNILGKNVSSCLHEIATSDKHFALS 336 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 G+ PT N + I+ R+ + + YP +L L Sbjct: 337 GHISRPTDVFCNKDFQNEEIDVRSKKRQKNEV--------------YPAYLLNLCCPRSS 382 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 D++ P+++ + F++ + F ++I K Sbjct: 383 YDLHFEPSQTIVEFKDWQTVMYFFERTITDYWKKHAPQ 420 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 86/222 (38%), Gaps = 27/222 (12%) Query: 397 EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ-------HAAHERLIFEKMRQDFNS 449 E + ++ Q+ + +I + + L++VDQ H +E + + + + Sbjct: 990 ECIDKNCFEEARVLLQLDKKFIPVISGEVLLLVDQEEFIFYVHILYEVVSVYMVTKVLSD 1049 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA------ERFGPNAIAIR----- 498 L + E + L E L ++ + + G E F N +R Sbjct: 1050 DGRGITYLDSEEDLVLPETGFQLFQKYMQQIQSWGWIINSTNSCESFKKNMNVLRRQSRR 1109 Query: 499 ----EIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQS 554 +P IL + L D I ++ D+ + + + IL AC G+I G + Sbjct: 1110 LTLAAVPCILGVTLTGKDLMDFIQQLDDTDGSSAIPPAVIRILNFKACRGAIMFGDPLLP 1169 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKL----KLS-DIEKL 591 E + ++ E++ QC HGRPT + + L ++ +L Sbjct: 1170 SECSLIIEELKATSLCFQCAHGRPTTVPIVNVASLRGELARL 1211 >gi|149011045|ref|ZP_01832350.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP19-BS75] gi|147764681|gb|EDK71611.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP19-BS75] Length = 195 Score = 171 bits (433), Expect = 4e-40, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 1/182 (0%) Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +H Y+ +Q DGL I+DQHAA ER+ +E+ R+ + + Q LL P I + + Sbjct: 1 MHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIGNVDQSQQQLLVPYIFEFPADDALR 60 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + E L +G+ +G N +RE P ++++ I + ++ D ++ + +++ Sbjct: 61 LKERMPLLEEVGVFLAEYGENQFILREHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKY 119 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 + M+C SI++ ++ +LL ++ + N C HGRP + SD+EK+F Sbjct: 120 RAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCDNPYNCPHGRPVLVHFTKSDMEKMF 179 Query: 593 GR 594 R Sbjct: 180 RR 181 >gi|240281641|gb|EER45144.1| DNA mismatch repair protein [Ajellomyces capsulatus H143] Length = 820 Score = 171 bits (432), Expect = 4e-40, Method: Composition-based stats. Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 23/234 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I +L I + + ++ P KELI+NSLDA ++ + +A Q+ DNG Sbjct: 1 MSIAQLPPDTIRAVRSNSVLSDPCALAKELIDNSLDAGATCISVEVAANTLDTIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGA-VSHLTLMSRPPQN 115 G+ + P+ +R CTSK+ DD NI T GFRGEAL S ++ + +R + Sbjct: 61 TGIHPNDRPLVCKRSCTSKLRSIDDLENIGGSTLGFRGEALASAAEMCGNIAITTRVSGD 120 Query: 116 NTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITDVIRR 174 + GT V V + +P R KS N + V+ Sbjct: 121 ---------------CTKASHPTGTTVRVYEFLRFVPVRKQRALKSTSKTLNRMKKVLNA 165 Query: 175 MAIAYPKV--SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE 226 ++ P++ SF K++ + + + + +VIG + I+ + Sbjct: 166 YVLSRPEIRLSFKILKSKNDSSWIYASNKHPTVSTAMLRVIGAEAISQCTTITW 219 >gi|154275632|ref|XP_001538667.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150415107|gb|EDN10469.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 720 Score = 170 bits (431), Expect = 6e-40, Method: Composition-based stats. Identities = 75/400 (18%), Positives = 129/400 (32%), Gaps = 47/400 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I +L I + + ++ P KELI+NSLDA ++ + +A Q+ DNG Sbjct: 1 MSIAQLPPDTIRAVRSNSVLSDPCALAKELIDNSLDAGATCISVEVAANTLDTIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+ + + +R CTSK+ DD NI T GFRGEAL S Sbjct: 61 TGIHPNDRHLVCKRSCTSKLRSIDDLENIGGSTLGFRGEALASAAE-------------- 106 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRM 175 GT V V + +P R LKS N + V+ Sbjct: 107 --------------------MCGTTVRVDEFLRFVPVRKRRALKSASKTLNRMKKVLNAY 146 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 ++ P++ +F +K + N +S + A+ +Q Sbjct: 147 VLSRPEIRLSFKILKRKNDSSWIYA--SNKHPTVSTAMLRVIGAEAISQCTTITWPQIQD 204 Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295 +N + S + P+ P + L P Sbjct: 205 ERDDSLRPMSTSNGVAKELVELFKSHIRSGSLCDSGQTP--PVD--PFCFIHLHCRPGIY 260 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM--ISSFHQDNAPKT 353 DVNV P K+ + F + ++ + + + + + ++ S + P Sbjct: 261 DVNVEPLKNDVLFEDSKLVISMAGNLFKTVYGETKPRHTHQRNCQIENQPSSSRMIRPLD 320 Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 P +E + S S + + + Sbjct: 321 SRPANNQRDHEVEESPLFRHISSSATKDCHSIECICASSS 360 >gi|213857669|ref|ZP_03384640.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 81 Score = 170 bits (430), Expect = 6e-40, Method: Composition-based stats. Identities = 38/79 (48%), Positives = 56/79 (70%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ NQIAAGE++ERP+ +KEL+ENSLDA ++R++ I GG +I DNG Sbjct: 3 MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNG 62 Query: 61 FGMTSEEIPMAVQRHCTSK 79 G+ +E+ +A+ RH TSK Sbjct: 63 CGIKKDELALALARHATSK 81 >gi|168000047|ref|XP_001752728.1| predicted protein [Physcomitrella patens subsp. patens] gi|162696259|gb|EDQ82599.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1067 Score = 170 bits (430), Expect = 7e-40, Method: Composition-based stats. Identities = 74/358 (20%), Positives = 146/358 (40%), Gaps = 34/358 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I +LS +++ + + ++ A++ELI NSLDA +++V GGG S ++ D+G Sbjct: 3 RIGRLSAAVVSHLRSNTVVSSFEQAVEELICNSLDAGATQVRVQFDGGGAS-VKVEDDGH 61 Query: 62 GMTSEEIPMAVQRHCTSKIS--DDFSN-IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 GM+ E++ + RH TSK+ D+ + + T GFRGEAL S+ +S L + SR Sbjct: 62 GMSREDLELVGLRHATSKLHTLDELAAGVQTLGFRGEALSSLSDLSILEITSRVQGCPHT 121 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-----------------LKSE 161 + R + +RD+F+ P R S Sbjct: 122 YCKIMKASFPGLYRLHC-----TITLRDMFYNQPVRRRLFHSSQNAAFTFAVNLPWCCSS 176 Query: 162 QVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA 221 + + + I R+A+AY V+F + +++ + + + + V G +F + Sbjct: 177 RKILQSVKERIVRLALAYFNVTFILTDSLRVEEELHIR-RHTSLYSTLQDVFGREFCHGL 235 Query: 222 VELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS---TIRTAYAETIPL 278 E++ ++ L G+ + VF + + + ++ Sbjct: 236 KEIDFAKGKLRLTGFLS----STETYTSLKVFTDPSHLLNATPSGGEPKRIEKLDTSLGK 291 Query: 279 GRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 YP VL L + + D+ K+Y+ F++ T F+ + + + + Sbjct: 292 AAYPAFVLNLSCELSEYDITFEATKTYVEFKDWTPALTFLENVLCVSWGDEAEKRQAT 349 Score = 87.0 bits (214), Expect = 8e-15, Method: Composition-based stats. Identities = 42/313 (13%), Positives = 85/313 (27%), Gaps = 61/313 (19%) Query: 319 IQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 Q+A + ++ H T + + E R +T Sbjct: 713 EHLCQQAEWTCTSPAVAPDHDLVLPKSRPTEKESIHRDVDVTPVASLYEVWSNPCMRANT 772 Query: 379 NDLLPSDDPTYSEDNDPVEESEATHY--QLGIACAQIHQNYIISQTTDGLVIVDQHAAHE 436 ND+L T + ++ T Q Q+ +I + L++VD Sbjct: 773 NDILHVSAVTLKSWSKSLQPDMVTKKSLQHARVLQQVDNKFIAIVAQNVLLLVD------ 826 Query: 437 RLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP---- 492 + + S L + L GE + + + + G + Sbjct: 827 -------QVLAAGKQQCSTLLDVKHDLSLGLGEQQTLHAYRQQIEDWGWRFCTASDARSL 879 Query: 493 ------------NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATM 540 + + +P IL L + + ++ + + +L Sbjct: 880 DRTSIRGCDSTTCKLQLSAVPCILGVNLTASDLEEYLQQLGATQGASVPPPAVIRLLNYK 939 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSS----------------------------- 571 +C G+I G + + +L+ ++ Sbjct: 940 SCRGAIMFGDPLLPAQCRQLVSHLKHTSLCFQDYASSLAAFSSKATPMLCLINDFCLFVT 999 Query: 572 -QCNHGRPTFIKL 583 QC HGRPT + L Sbjct: 1000 LQCAHGRPTMVPL 1012 >gi|330720969|gb|EGG99136.1| DNA mismatch repair protein MutL [gamma proteobacterium IMCC2047] Length = 138 Score = 169 bits (429), Expect = 9e-40, Method: Composition-based stats. Identities = 49/136 (36%), Positives = 84/136 (61%) Query: 459 TPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIID 518 P I + E E + E + +LG ER GP ++ +R+ +L + QL+RD++ Sbjct: 1 MPVSIAVSEREASCAEEFQQTFAQLGFVVERAGPESLLVRQGATMLRNADSEQLVRDVLS 60 Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 +++ ++ +++ I IL++MAC+GS+R+ RK+ EMN LLR+ME S QCNHGRP Sbjct: 61 DMLAQGSSDRIREHINEILSSMACHGSVRANRKLTIPEMNALLRQMEATERSGQCNHGRP 120 Query: 579 TFIKLKLSDIEKLFGR 594 T+ ++ + +++KLF R Sbjct: 121 TWTQMSMFELDKLFLR 136 >gi|300708140|ref|XP_002996256.1| hypothetical protein NCER_100672 [Nosema ceranae BRL01] gi|239605541|gb|EEQ82585.1| hypothetical protein NCER_100672 [Nosema ceranae BRL01] Length = 698 Score = 169 bits (428), Expect = 1e-39, Method: Composition-based stats. Identities = 80/354 (22%), Positives = 136/354 (38%), Gaps = 42/354 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L +K I + + I+ +KELIENSLD+ ++ ++ + ++ DNG G Sbjct: 2 IKNLDQKTSELIKSQQYIQNTYTIVKELIENSLDSNATEIKIFVDD---ELIRVEDNGTG 58 Query: 63 MTSEEIPMAVQRHCTSK---------ISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPP 113 + ++ TSK ++ D +NI+ G+RG AL SI + L + SR Sbjct: 59 IL--DLKDVGNEGYTSKELTTYFVLGLNTDSTNIY-CGYRGLALCSIKNMCSLEITSRHK 115 Query: 114 QNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLN-FLKSEQVETNLITDVI 172 N G + I+ I GT V+V ++F R KS + I ++ Sbjct: 116 NNLIGYKKNINTGHI---SACPREIGTTVDVTNIFNNCILRKKLNKKSLTKDVKQIIKLV 172 Query: 173 RRMAI---AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN 229 + +V F +TI + + I + F N E K Sbjct: 173 EAYVKVYDVHFQVKFKGTTIFNECG-----------YKNILEYCKSKFNNIYDECLIKDM 221 Query: 230 EITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 + V+ R V K I I++ Y + P+ L+L+ Sbjct: 222 PDFFIFMFPNN----QGKEESTVYFGKRFVTSKKISKEIKSTYN--LFQEGLPLFYLVLK 275 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS 343 +D N+ P KS I F N I I + I ++ + + ++ + K IS Sbjct: 276 CP---IDFNISPTKSEILFENEDEIIGKIKKEITNFLSNQMVFKNNHTTNKKIS 326 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 97/238 (40%), Gaps = 16/238 (6%) Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIH 414 P Y ++ + E ++ + + + D + + + Q + Sbjct: 471 PIYEVPVSPSNENFNIESSGKTICLQETAYDFIKQVQQCEISLVLKKNDFFDMEIIGQFN 530 Query: 415 QNYIISQTTDG----LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGEC 470 + +II++ L+IVDQHAA E +E ++ + KI Q +L P + L + Sbjct: 531 KGFIITRLVKNDKIYLIIVDQHAADEIFNYENIK---KNAKILKQKVLVPIELKLSPIDK 587 Query: 471 ALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 + E+ G E + +P ++ +++D + T Sbjct: 588 LFVEENIVSFSIYGFDIENM-----KLLTVPVFKGEEFNLNDFYELLDNFKNGGEGLT-- 640 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDI 588 +I+ I+A+ AC S+ G + ++ ++++ ++ +C HGRPTF+ ++ D+ Sbjct: 641 -KIQKIMASKACRMSVMVGDSLNKAKLEKIVKRLKDLEKPWKCPHGRPTFMVVEEIDL 697 >gi|302413792|ref|XP_003004728.1| DNA mismatch repair protein pms1 [Verticillium albo-atrum VaMs.102] gi|261355797|gb|EEY18225.1| DNA mismatch repair protein pms1 [Verticillium albo-atrum VaMs.102] Length = 116 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 2/106 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + +++I +G++I +KEL+ENSLDA ++ ++ G ++ DNG G Sbjct: 4 IKAIEANTVHRIQSGQVIVDLCSVVKELVENSLDANATAIDVRFKNQGLEAIEVHDNGSG 63 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHL 106 ++ + +H TSK++ D + + TFGFRGEAL S+ A+SH Sbjct: 64 ISPDNYEGLALKHHTSKLATFSDLNTLSTFGFRGEALSSLCALSHF 109 >gi|154344651|ref|XP_001568267.1| mismatch repair protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065604|emb|CAM43374.1| mismatch repair protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 840 Score = 167 bits (423), Expect = 5e-39, Method: Composition-based stats. Identities = 74/427 (17%), Positives = 155/427 (36%), Gaps = 60/427 (14%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L +IAAG++I + +KEL EN+LDA+++ V + G + D+G G Sbjct: 2 IARLDGACARKIAAGQVITDLTSVVKELTENALDAKAATVTIRLLNYGLDEIVVDDDGTG 61 Query: 63 MTSEEI--------------PMAVQRHCTSKIS-DDFSNIH------------------- 88 ++ + P+ R T+K DD Sbjct: 62 LSMGRLVDTATNKLRDGASTPLLSSR-ATTKQRWDDLDRYTHASAKGEVDDHLTSQVEST 120 Query: 89 ------------TFGFRGEALPSIGAVSHLTLMSRPPQNNTGA-QIAISGEKISSVRPVA 135 + GFRGEAL S+ + +T+ +R +++ +S Sbjct: 121 RVAGGEGDSFDPSLGFRGEALHSLAHMGTVTIETRSADTGAMTVRLSYDHALHTSRLEAV 180 Query: 136 MNP---GTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK- 190 GT V VR LF +P R ++K+ + + + T +++ A+++P + + Sbjct: 181 RLRDVLGTTVTVRHLFKHLPVRHREYVKNCRKQLSKATSTMKQYAVSHPHIRLVMQHQET 240 Query: 191 --SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF-NRGNA 247 S + + +G+ ++ G +++ +N + TL G R ++ Sbjct: 241 PTSGVITLVSLTGSGDATRSATEAYGGLCVSHMQRVNWSLSFGTLSGLVSKVNSGGRLSS 300 Query: 248 NQFYVFINGRTVQDKFILSTIRTAYAETIPLGR---YPVVVLLLEIDPR-QVDVNVHPAK 303 + ++GR V + + A+ + +P + L ++ + Q DVN+ P K Sbjct: 301 DNQVFALDGRLVDLPRLGKALNDAFTQCLPNASQRLHVAFFLQVKTNASLQYDVNLTPNK 360 Query: 304 SYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLT 363 + + + + + + +++ + D T ++ Sbjct: 361 RKVLLVQEDRLADEVYRRALQEFGSALQEVELDRGQRIAQARTADVRAAQLTKLIRTPVS 420 Query: 364 NTQEKLF 370 T F Sbjct: 421 ATSFTQF 427 Score = 133 bits (334), Expect = 9e-29, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 91/233 (39%), Gaps = 6/233 (2%) Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 + + D S ++D ++ Q + +I Sbjct: 603 QEPFSADPPDAVVLPASTKKRDRASSRTLGAQTEDDLNYYFNKNSFKEMRVIGQFNHGFI 662 Query: 419 ISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 ++ +G + IVDQHA+ E+ +E++ + + +T Q L+ P + + E L MEH Sbjct: 663 VATLPNGDVFIVDQHASDEKYNYERLVRAYEATP---QPLVLPVSVAMSTHEVDLAMEHK 719 Query: 478 EDLHRLGIKAERFGPNA-IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L G K R + + + +P + + +++ +I+ T + + Sbjct: 720 LALQHHGFKVNRGSDDTKLMVYSLPVLPYDVVSASDVMELVQQIVQYGTITKPLRAVWHS 779 Query: 537 LATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL-KLSDI 588 +AT AC SI G + M +L + + C HGRPT L ++++ Sbjct: 780 MATKACRSSIMIGTPLTMKRMKLILERLGELDQPWNCPHGRPTLRLLCNIAEL 832 >gi|149046219|gb|EDL99112.1| similar to postmeiotic segregation increased 1, isoform CRA_b [Rattus norvegicus] Length = 150 Score = 167 bits (423), Expect = 5e-39, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 68/123 (55%), Gaps = 2/123 (1%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ + I +KELIENSLDA ++ ++ + G +I DNG G+ Sbjct: 2 KQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGANSIDVKLENYGFDKIEIRDNGAGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + ++P+ ++ TSKI +D + T+GFRGEAL +I V+ + + +R ++ Q Sbjct: 62 KAVDVPVMAVKYYTSKISSHEDLQTLTTYGFRGEALGAICNVAEVVVTTRTAADDFSTQY 121 Query: 122 AIS 124 + Sbjct: 122 VLD 124 >gi|134111188|ref|XP_775736.1| hypothetical protein CNBD4650 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258400|gb|EAL21089.1| hypothetical protein CNBD4650 [Cryptococcus neoformans var. neoformans B-3501A] Length = 812 Score = 167 bits (423), Expect = 5e-39, Method: Composition-based stats. Identities = 76/407 (18%), Positives = 162/407 (39%), Gaps = 43/407 (10%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGG-GKSFFQITD 58 M I L + + I+ + EL++NSLDAE++++E + G ++ D Sbjct: 1 MPNILPLPRPTSTTLRSSIILPSLAQIFSELLQNSLDAEATKIECYVNLAKGNETLRVED 60 Query: 59 NGFGMTSEEIPMAVQRHCTSK-ISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG G++ + +R TSK I + + ++GFRGEAL SI ++S L + +R Sbjct: 61 NGTGISKNGLAKIGKRFRTSKEIHEGGLGPVGSYGFRGEALASIASLSLLDITTRRASFP 120 Query: 117 TGAQIAISGEKIS----SVRPVAMNPGTIVEVRDLFFTIPARLNF--LKSEQVETNLITD 170 +I + + R +A GT V VR++F TIP R S + + + Sbjct: 121 VYTKILRHSKTLFEGPNPDRHIAGGQGTTVVVREIFRTIPVRREELAATSSTLLMSQLKK 180 Query: 171 VIRRMAIAYPKVSF-----TFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN 225 V+ +A+ P V + +T + M+ +++ + + G + + ++ Sbjct: 181 VVETLALGNPGVRWVLWEEKTTTTGGLKRIMSINASDSAL-DVFKTLYGGALVQSVQKIK 239 Query: 226 EKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTI----------------- 268 + + + G+ + +++IN + + + I Sbjct: 240 VTAGKRKVDGFIS--ISGDVSKAHQHLYINNYPIDRGDVHTAIAKKFASSKFANLASAGQ 297 Query: 269 RTAYAETIPLG--------RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQ 320 + P G RYPV VL + + ++DV+ P K + +++ ++ ++ Sbjct: 298 HDEDEDYHPSGRRSPRRLERYPVYVLNVTLSAGELDVSYEPQKGVLGYKDIESLKTMLLA 357 Query: 321 SIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQE 367 + + + + G + S + + + + A++L Sbjct: 358 VVDEFLRRNGFGPAHTPSSMSSPTKRPVSHVSQPVGRLASALGRPSP 404 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 68/210 (32%), Gaps = 52/210 (24%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST-------KITSQTLLTPEIIDLLEGECALIMEHDE 478 L ++DQHAA ER+ EK+ + I+ E + Sbjct: 565 LALIDQHAADERVAVEKVLLELCEGFAKDDLLVAELAKTRPMIILTQAEAQILSQPWVLS 624 Query: 479 DLHRLGIKAE-----RFGPN-AIAIREIPAIL-------SKKNIPQLLRDIIDEIIDSST 525 R GI+ G + + +P L + +L+R + + + ++ Sbjct: 625 LFKRWGIRLTMPPGLSHGEYIQVKVETVPLSLLSRLGRKEGSEMTRLVRGYLPIVAEHAS 684 Query: 526 TYTL--------------------------------QDRIENILATMACYGSIRSGRKMQ 553 T+ + + + AC G+I ++ Sbjct: 685 EITVLVENLEGKAMEDNEGGDTEGYGGDWGRLMRFMPREMLELANSKACRGAIMFEDRLS 744 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + +RL++++ + C HGRP+ + L Sbjct: 745 HDQCDRLIQQLSQTRFPFMCAHGRPSMVPL 774 >gi|53729301|ref|ZP_00348375.1| COG0323: DNA mismatch repair enzyme (predicted ATPase) [Pasteuria nishizawae str. North American] Length = 213 Score = 167 bits (423), Expect = 5e-39, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 2/197 (1%) Query: 399 SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS-TKITSQTL 457 + QIH Y++++ DG+ ++DQHAAHER+ +E++ + TSQTL Sbjct: 16 PAPMAWPRLRPVVQIHATYVVAEAEDGMCLIDQHAAHERIHYERLCASLQGADRRTSQTL 75 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 L P ++L E + L +GI+ E FG +R P++ S + +L D + Sbjct: 76 LLPISVELPRDEAYTLKPLLPSLAEIGIEVEPFGEATFLVRSHPSVWSAQEAAAILPDWL 135 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 E+ S + + + +C SI++ ++ EM LL++ + C HGR Sbjct: 136 TEVARSGRPTPTC-WLAELTSRWSCRASIKAQHRLSFAEMEALLQQWMDCQQPATCPHGR 194 Query: 578 PTFIKLKLSDIEKLFGR 594 P +++ ++ +LF R Sbjct: 195 PVVVRMTSEELARLFRR 211 >gi|46202859|ref|ZP_00052488.2| COG0323: DNA mismatch repair enzyme (predicted ATPase) [Magnetospirillum magnetotacticum MS-1] Length = 154 Score = 167 bits (423), Expect = 5e-39, Method: Composition-based stats. Identities = 61/153 (39%), Positives = 94/153 (61%), Gaps = 10/153 (6%) Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + Q LL P+++++ E ++E +L RLG+ E FGP A+ +R +PA L+ ++ Sbjct: 1 MARQVLLIPDVVEMAPEEADRLVEAAPELERLGLSLEAFGPGAVLVRAVPAALAGGSVKN 60 Query: 512 LLRDIIDEI----------IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 L+ D++D + + R++ +L+ M+C+GSIR+GR+++ EMN LL Sbjct: 61 LVLDVLDALEASGVEEGGPAGEGDPDPVSRRLDALLSRMSCHGSIRAGRRLKPEEMNALL 120 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 REME P S CNHGRPTF+ L LSDIE+LFGR Sbjct: 121 REMEATPLSGSCNHGRPTFVTLGLSDIERLFGR 153 >gi|332260508|ref|XP_003279328.1| PREDICTED: putative postmeiotic segregation increased 2-like protein 1-like [Nomascus leucogenys] Length = 242 Score = 167 bits (423), Expect = 5e-39, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 4/185 (2%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S +KEL+ENSLDA ++ ++ + G +++DNG Sbjct: 47 IKPIGRKSVHQICSGPVVLSLSTVVKELVENSLDAGATNIDLKLKDYGVHLTEVSDNGCR 106 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 E +H T KI + D + + TFGF+ EAL S+ A S +T+ GA+ Sbjct: 107 EKEENFEGLTLKHHTCKIQEFADLTQVETFGFQAEALSSLCAPSDVTISICHALAKVGAR 166 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIA 178 + KI P + GT V V+ L T+P R F ++ + Sbjct: 167 LVFDHNGKIIQKTPYPLPRGTTVSVKQLLSTLPMRHKEFQRNVKKVQRACFPFAFCHNCQ 226 Query: 179 YPKVS 183 +P+ S Sbjct: 227 FPEAS 231 >gi|83765470|dbj|BAE55613.1| unnamed protein product [Aspergillus oryzae] Length = 156 Score = 166 bits (420), Expect = 9e-39, Method: Composition-based stats. Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 5/142 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + I + +I P +KEL++N+LDA ++ + I+ Q+ DNG Sbjct: 1 MPITALPPTTVRAIGSTSVIADPCSVVKELLDNALDASATSIGIEISSNAVDVIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVS-HLTLMSRPPQN 115 G++S++ + +R TSKI +D + + GFRGEAL S VS +T+ +R Sbjct: 61 HGISSDDHALVCKRTFTSKIQTVEDLRTLGGKSLGFRGEALASAAEVSGGVTITTRVEAE 120 Query: 116 NTGAQIAISGEKISSVRPVAMN 137 G I + Sbjct: 121 MVGTSIKYGRNGELISYRWQTH 142 >gi|238482997|ref|XP_002372737.1| DNA mismatch repair protein mutl, putative [Aspergillus flavus NRRL3357] gi|220700787|gb|EED57125.1| DNA mismatch repair protein mutl, putative [Aspergillus flavus NRRL3357] Length = 145 Score = 166 bits (420), Expect = 1e-38, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 5/128 (3%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + I + +I P +KEL++N+LDA ++ + I+ Q+ DNG Sbjct: 1 MPITALPPTTVRAIGSTSVIADPCSVVKELLDNALDASATSIGIEISSNAVDVIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVS-HLTLMSRPPQN 115 G++S++ + +R TSKI +D + + GFRGEAL S VS +T+ +R Sbjct: 61 HGISSDDHALVCKRTFTSKIQTVEDLRTLGGKSLGFRGEALASAAEVSGGVTITTRVEAE 120 Query: 116 NTGAQIAI 123 G I Sbjct: 121 MVGTSIKY 128 >gi|111380657|gb|ABH09705.1| MLH2-like protein [Penicillium marneffei] Length = 990 Score = 164 bits (415), Expect = 4e-38, Method: Composition-based stats. Identities = 76/428 (17%), Positives = 146/428 (34%), Gaps = 47/428 (10%) Query: 43 ETVIAGGGKSFFQITDNGFGMTSEEIPMAV--------------------QRHCTSKIS- 81 + G ++ DNG G+ + +H TSK++ Sbjct: 3 KVRFKNDGLDSIEVQDNGSGIDPQNYESIGMTTVTISNIEIDSQAYYFTALKHYTSKLAS 62 Query: 82 -DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPP-QNNTGAQIAISGE-KISSVRPVAMNP 138 DD +++ TFGFRGEAL S+ AVS+ +++ Q ++ K+ + VA Sbjct: 63 YDDLTSLTTFGFRGEALSSLCAVSNFHIITAQAHQAPKANKLEFEHSGKLKGSQIVAGQK 122 Query: 139 GTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMN 197 GT V + +LF +P R K+ + E + +++ A V F+ S + ++ Sbjct: 123 GTTVSISNLFSRLPVRRKELEKNIKRELGKVINLLNEYACISTGVRFSVKNTDSKKRQLV 182 Query: 198 FQSTNGN--FPERISQVIGEDFINNAVELNEKSNE---------------ITLQGYTGIP 240 +T N + I+ V G + + L + I ++GY P Sbjct: 183 LLTTKANASIRDNIANVYGAKTLLTLIPLELELEFEPSATGKRLNRDLNKIHVRGYVSRP 242 Query: 241 TF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 RG ++ ++N R I Y + + P V+ ++D DVN Sbjct: 243 VVGEGRGTRDRQMYYVNSRPCGIPQIAKAFNEVYKTY-NISQAPFVLADFQMDTNAYDVN 301 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISSFHQDNAPKTHLP 356 V P K I + + + +++ + ++ + S K + Q P Sbjct: 302 VSPDKRTILLHDSAALIESLKEALDQMFQDAEQTVPQSQFTINKQQTDIQQRLKPSPMRA 361 Query: 357 KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQN 416 S T + S + + + + T I ++ Sbjct: 362 PLDRSRTEQATPTEESQTDRSEPVQVTHQHAQEDKTAEVADNENITQETTDSQVTAISED 421 Query: 417 YIISQTTD 424 ++ Sbjct: 422 AAADESDH 429 Score = 129 bits (325), Expect = 9e-28, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 22/178 (12%) Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I E+ L + Sbjct: 762 DELFIIDQHASDEKYNFERLQ---AETVVQNQRLVHPKTLDLTAVEEEIIRENKLALEKN 818 Query: 484 GIKAE-------RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL------- 529 G E G + +P + L ++I + ++ T+ T Sbjct: 819 GFVIEVDDSGNEPIGRRCKLV-SLPLSKEVVFDIRDLEELIVLLSEAPTSATRNATTSDT 877 Query: 530 ----QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ + A AC SI G+ + +M + +R M C HGRPT L Sbjct: 878 YIPRPSKVRKMFAMRACRSSIMIGKTLTVKQMEKAVRNMGTIDKPWNCPHGRPTMRHL 935 >gi|284054368|ref|ZP_06384578.1| DNA mismatch repair protein [Arthrospira platensis str. Paraca] Length = 146 Score = 164 bits (415), Expect = 4e-38, Method: Composition-based stats. Identities = 42/109 (38%), Positives = 65/109 (59%), Gaps = 3/109 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I LSE +++ IAAGE+I+ + ++EL+EN++DA+++R+ + + Q+ DNG Sbjct: 7 SIETLSEDVVDLIAAGEVIDSVAAVVRELVENAIDAKATRISVSLW-PQQWRIQVADNGE 65 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTL 108 GM + A H TSKI+ D I + GFRGEAL SI +S L + Sbjct: 66 GMDLVNLKRAAMAHSTSKIATARDLLKISSLGFRGEALHSIAQLSDLEI 114 >gi|309799337|ref|ZP_07693580.1| DNA mismatch repair protein MutL [Streptococcus infantis SK1302] gi|308117004|gb|EFO54437.1| DNA mismatch repair protein MutL [Streptococcus infantis SK1302] Length = 211 Score = 164 bits (415), Expect = 4e-38, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 1/178 (0%) Query: 413 IHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 +H Y+ +Q DGL I+DQHAA ER+ +E+ R+ + + Q LL P I + + Sbjct: 1 MHGTYLFAQGRDGLYIIDQHAAQERVKYEEYRESIGNVDQSQQQLLVPYIFEFPADDALR 60 Query: 473 IMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDR 532 + E L +G+ +G N +RE P ++++ I + ++ D ++ + +++ Sbjct: 61 LKERMPLLEEVGVFLAEYGENQFILREHPIWMAEEEIESGIYEMCDMLLLTKEV-SIKKY 119 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 + M+C SI++ ++ +LL ++ + N C HGRP + SD+EK Sbjct: 120 RAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCENPYNCPHGRPVLVHFTKSDMEK 177 >gi|323141917|ref|ZP_08076778.1| DNA mismatch repair protein, C-terminal domain [Phascolarctobacterium sp. YIT 12067] gi|322413664|gb|EFY04522.1| DNA mismatch repair protein, C-terminal domain [Phascolarctobacterium sp. YIT 12067] Length = 518 Score = 163 bits (412), Expect = 1e-37, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 118/279 (42%), Gaps = 4/279 (1%) Query: 317 FIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK-LFLQENR 375 + + + + + + + + Q T + QE L + E R Sbjct: 240 QLATASESLLVPEQPVPAVKKEQGEQQTMWQPFDDFTQTAATVSYSKGYQEPVLEVHEAR 299 Query: 376 LSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAH 435 P++ ++ + Q+ + +II+Q+ L ++DQHAAH Sbjct: 300 SEFAKPQPAEAAPAADRETIAFTDTDSGMDTIWPIGQVDKTFIIAQSETTLYLIDQHAAH 359 Query: 436 ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAI 495 ER++++K+ I SQ LL P +D+ + ALI EH ++ LG+ A G + + Sbjct: 360 ERILYDKLVASHEQ--IPSQQLLMPLYVDMAADDIALIEEHRDEFLALGVDAASAGESLL 417 Query: 496 AIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSI 555 + +PA + + + I + + D + +L AC +I++G+ + Sbjct: 418 RVSSLPADIKADSAEDFINAISKMLREMRNVNG-SDLRQEVLHMTACKAAIKAGQLLNMR 476 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 +M +L+ ++ + C HGRP I++ + + K+F R Sbjct: 477 QMRQLIIDLCNTTHPFTCPHGRPCMIEIDSNQLYKMFKR 515 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 60/278 (21%), Positives = 112/278 (40%), Gaps = 23/278 (8%) Query: 151 IPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERIS 210 +PAR FLK+ E I++++ R+A++ P V F ++ +G+ I Sbjct: 1 MPARRKFLKTVSTEGRYISELLTRLALSRPDVRFKLVNNDK---EVLSTPGDGDLEHAIR 57 Query: 211 QVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRT 270 + G++ N +E++ ++ + G+ G PT +G F+NGR + K + + Sbjct: 58 ALYGKNVAENLLEVSLNDPKVRISGFIGKPTLLKGTRQWQTFFVNGRCIGSKMLSKAMDH 117 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG 330 AY IP +P V+ L++D VDVNVHP KS I+F + ++I + +++ A+ K Sbjct: 118 AYQSQIPKSGFPFAVINLKVDTASVDVNVHPQKSEIKFSDDSLIYKAMYKALTDALTKPM 177 Query: 331 --------------------ISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLF 370 + S AP+ A + T E+ Sbjct: 178 SAKKTQVTLLPDSELNVFVKPQSISTPVTPAPQPKPAYQAPQPVFKSGAEPIFKTPERKE 237 Query: 371 LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 + ++ LL + P + + E+ Sbjct: 238 DAQLATASESLLVPEQPVPAVKKEQGEQQTMWQPFDDF 275 >gi|196011772|ref|XP_002115749.1| hypothetical protein TRIADDRAFT_59762 [Trichoplax adhaerens] gi|190581525|gb|EDV21601.1| hypothetical protein TRIADDRAFT_59762 [Trichoplax adhaerens] Length = 817 Score = 161 bits (408), Expect = 3e-37, Method: Composition-based stats. Identities = 77/372 (20%), Positives = 146/372 (39%), Gaps = 37/372 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 KI+KL E NQIA+ I S I+EL+ NS+DA+S+ + + + ++ DNG Sbjct: 12 KIQKLDEDSRNQIASQLCINTFSQCIEELVLNSIDAKSTHILIAVDPNRLN-VEVCDNGD 70 Query: 62 GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHL------TLMSRPP 113 G+ SE + RH TSK + H+ G+RGEA+ SI +++ + ++ SR Sbjct: 71 GIDSENLRFVGLRHYTSKYVTRANLQAPHSIGYRGEAVASICSIAKIVEVQTRSITSRNT 130 Query: 114 QNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS-EQVETNLITDVI 172 ++ + GT V + D+F+++P R + + E ++I + Sbjct: 131 YTKKFVNGLSISDEPTVAEKSRNYIGTTVTLTDIFYSLPVRYHRTTTMWDRERHIIKQKL 190 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 +AI Y +++ + + N I + G +++ S+ Sbjct: 191 EALAIIYYQITIILKNQVNGVILLKSHECC-NLAASIQCLYGITIKRTLQKMDFNSDNFQ 249 Query: 233 LQGYT-GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTA---YAETIPLGRYPV----- 283 L GY I + N N Y+++NGR + I + + I R + Sbjct: 250 LSGYIDTIHSDNNYNRYPQYIYLNGRLMHKNVIYDELNHTLLVIFKLINRHRKKMMTPNH 309 Query: 284 -----------------VVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 + ++ + P V + + + I+F I+ + I + + Sbjct: 310 SSNCPQIARLSRLSDCYMYIIHIVCPISEYVVLETSSNKIQFIRQDIVLSGIKKLCYQYF 369 Query: 327 NKKGISTSSVLS 338 + T L Sbjct: 370 TQNWWMTPEELH 381 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 71/212 (33%), Gaps = 10/212 (4%) Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 + P K+ + ++++ A + S K +Q +L + Sbjct: 565 ISPTKNVNAIPQARPLTKNLMKTNGIA----NSNVRSSYKIKRSHILYQSQMANYNLSQQ 620 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI--ACAQIHQN 416 + ++ F + + L S + V+ G A ++ Sbjct: 621 NSGSATSRLSAFKEFTSATIALKLTSSTLDNCQVIGQVDNKFIACVIKGYINYIAPYFRH 680 Query: 417 YIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST---KITSQTLLTPEIIDLLEGECALI 473 + LV++DQHAA ER+ EK+ D+ + S + P + I Sbjct: 681 LAGDNKENYLVLIDQHAADERIRLEKLLTDYCQKPEEGLLSVNVRPPIAHITSHNIFSAI 740 Query: 474 MEHDEDLHRLGIKA-ERFGPNAIAIREIPAIL 504 + L RLGI+ +F I +P +L Sbjct: 741 HNSRDSLRRLGIQFLSKFDGKTTEILSVPKLL 772 >gi|39945290|ref|XP_362182.1| hypothetical protein MGG_04627 [Magnaporthe oryzae 70-15] gi|145011315|gb|EDJ95971.1| hypothetical protein MGG_04627 [Magnaporthe oryzae 70-15] Length = 928 Score = 159 bits (403), Expect = 9e-37, Method: Composition-based stats. Identities = 75/464 (16%), Positives = 165/464 (35%), Gaps = 53/464 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + + + A +I P +KEL++NS+DA+++ +E +++ ++ DNG Sbjct: 1 MPIAPLPQDAVRLLRAHVVISTPVSVVKELLDNSIDAKATSIEVLVSRNTVDRIEVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNI--HTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+ + + +R TSK+ +D+ NI + GFRGEAL ++ AV+ +T+ +R ++ Sbjct: 61 VGIETRDFEALGRRGHTSKLKSADELENIGGTSLGFRGEALAAVAAVAKVTVTTRTAADD 120 Query: 117 TGAQIA--ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIR 173 T +G+ + GT V ++F +P R +K + + ++ Sbjct: 121 TATVFDLLANGKGTLKNTIKSTPVGTTVTASEMFERLPVRKKVAIKEAKSTMVKMKQLLT 180 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQST-NGNFPERISQVIGEDFINNAVELNEK----- 227 A+A P++ + I +++ + + G D + VE+ K Sbjct: 181 AYALARPQLKLSIKEIGVAHPCLSYSPRLYATMKAAAACLFGSDLVAQCVEMTHKADAST 240 Query: 228 SNEITLQGYTGIPTFNR-------------------GNANQFYVFINGRTVQ-DKFILST 267 G P + + ++ R V + + Sbjct: 241 RRRNLADGVVSEPPDQCGGYIKIDALVPVPGIVPVKISNKGAFFSVDSRPVSASRTVFKK 300 Query: 268 IRTAYAETIPLG----------RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 I + + + I + P + L ++ DV++ PAK + F + I + Sbjct: 301 IYSRFKKCISKSLEASDDGKQAKEPFIALNIKCPQGSYDVSIGPAKDDVLFTDEQGIIDA 360 Query: 318 IIQSIQKA--INKKGISTSSVLSKKMISSFHQDNAPKT--------HLPKYATSLTNTQE 367 + ++ T + +++S + + + + Sbjct: 361 CDALFENTYGLSALQGETQRSSNMSLVNSVNSGEHMQNLGILSKNGSEKAGGIDFSPSPN 420 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 + + +D D TY + + + Sbjct: 421 RPADASPQEPASDYTIFDHVTYVNNPPNNQTTSRDGQWSVRMMG 464 >gi|242022721|ref|XP_002431787.1| DNA mismatch repair protein, putative [Pediculus humanus corporis] gi|212517112|gb|EEB19049.1| DNA mismatch repair protein, putative [Pediculus humanus corporis] Length = 1233 Score = 158 bits (400), Expect = 2e-36, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 125/279 (44%), Gaps = 8/279 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+KL + I + +G +I ++ EL+ N+LDAESS + + K Q+ DNG Sbjct: 1 MSIQKLPPEAIVKFQSGNVITDLVQSVLELVYNALDAESSTILIRVDL-KKFLIQVIDNG 59 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGA 119 G+ ++ +R+ TSK + F +I+T+G++G+AL S+ V L + +R +N A Sbjct: 60 NGIGISDLEKVGERYMTSKYNSHFCSINTYGYKGQALSSLVEVCKTLRIETRTKGDNVTA 119 Query: 120 QIAISGEKISSVRPVAMNP--GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 ++ ++ + GT V V D F++P R + +E + + ++ +++ Sbjct: 120 IKTFENGRMLNILHTSTKKDVGTFVSVEDFMFSMPVRKKRI-NEVFDLEELKTQLKYLSL 178 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT 237 + KVSFT N Q TN E ++ G + N ++G Sbjct: 179 IHHKVSFTLKNEHKNLILFQTQPTNSIL-ESTKKIFGVTMTKYLKKTTFSDNVFLIKGLI 237 Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 R +++ +++N R + I + + I Sbjct: 238 SKKP--RLSSSLQLIYVNNRVIAKGSIHKVVNDMISNHI 274 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 76/180 (42%), Gaps = 22/180 (12%) Query: 426 LVIVDQHAAHERLIFEKMRQDF------NSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + + DQHA ER+ EK+ + ++ S L L E ++ E Sbjct: 1023 ITLFDQHAVDERIRLEKLMNENSTDYILDNDVFLSTPLTPAIECSLNESMVEIVTSFHEQ 1082 Query: 480 LHRLGIKAERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDEIIDS- 523 ++G+ + I ++ IP L+ K I L+R ++E+ + Sbjct: 1083 FEKIGLDCQPLTDKTILVKSIPKFLTDKCTKAKKSCQDSFIKSLIETLIRSALEELTATR 1142 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 T + + + AC+ +I+ +K+ EM+++++E++ QC HGRP+ I + Sbjct: 1143 GTILKVPKILHKYFCSEACHNAIKFNKKLSLGEMSQMIKELKNCKLPFQCAHGRPSLIPI 1202 >gi|291233099|ref|XP_002736491.1| PREDICTED: PMS2 postmeiotic segregation increased 2-like, partial [Saccoglossus kowalevskii] Length = 532 Score = 158 bits (399), Expect = 3e-36, Method: Composition-based stats. Identities = 55/260 (21%), Positives = 102/260 (39%), Gaps = 6/260 (2%) Query: 327 NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDD 386 + S+ + K ++ + LP A L Q + + Sbjct: 268 STSHESSQNTEVDKEVNIQRHEVKVPFSLPGIANRLKQCQGAKSDFKTAGRSFRAEIKPQ 327 Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 S + + + ++ Q + +II + + L IVDQHA E+ FE +++ Sbjct: 328 DNKSAEEELQRKISKEMFKDMEVIGQFNLGFIIVKIKEDLFIVDQHATDEKYNFEMLQKH 387 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA---ERFGPNAIAIREIPAI 503 N I SQ L+ P+ ++L +++M++ E + G E + + +P Sbjct: 388 TN---IQSQKLIQPQKLELTPVNESVLMDNLEIFQKNGFDFITEEGDTGKKVKLISLPMS 444 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 + Q + ++I + D+ T R+ + A+ AC SI G + EM +L+ Sbjct: 445 KNWTFGKQDIDELIFMLNDAPGTMCRPSRVRQMFASRACRQSIMVGTALNKTEMKKLICH 504 Query: 564 MEKNPNSSQCNHGRPTFIKL 583 M + C HGRPT L Sbjct: 505 MGEIEQPWNCPHGRPTMRHL 524 Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 60/181 (33%), Gaps = 10/181 (5%) Query: 231 ITLQGYTGIPTFN--RGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL 288 L G P R ++ + FIN R + + Y +YP VVL + Sbjct: 32 FKLSGLVSKPDHGLGRSTCDRQFCFINKRPCDYSKVFKVLNEVYHMY-NRHQYPFVVLDI 90 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS------IQKAINKKGISTSSVLSKKMI 342 + VDVN+ P K I + + S + A+ + ++L Sbjct: 91 TLSKESVDVNITPDKRQILVAEEKTLLAVVKSSLIKLYEPRSALYQMNQKPMAILKSPSQ 150 Query: 343 SSFHQDNAPKTHLPK-YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEA 401 + L + Y+ S + E + ++ + + + + D ++SE Sbjct: 151 PGPAIQTLTLSRLKRAYSHSGSVDIESPGRPAKQPRLDNFVIASSQSIGKTEDEKQDSEG 210 Query: 402 T 402 Sbjct: 211 F 211 >gi|270010115|gb|EFA06563.1| hypothetical protein TcasGA2_TC009474 [Tribolium castaneum] Length = 944 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 66/318 (20%), Positives = 130/318 (40%), Gaps = 14/318 (4%) Query: 31 IENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFS-NI 87 + NSLDA+++ + + Q+ DNG G++ + QR+ T+K DD ++ Sbjct: 36 VLNSLDAKATAIAVRV-NFTTFRLQVVDNGRGISRPNLEFVGQRYMTNKCHSLDDLHKHL 94 Query: 88 HTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEK-ISSVRPVAMNPGTIVEVR 145 +GF+GEAL +I +S +T+ +R + + +K + + GT V V Sbjct: 95 KFYGFKGEALSNISHISQRVTVETREHNSEETFVKILEKDKQTINSSKCRASHGTTVTVE 154 Query: 146 DLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNF 205 +P R +K+ E I + + I +P+VSFT + ++ +T + Sbjct: 155 GFLHNLPVRQQCVKN--NELENIKRSLECLIIIHPRVSFTLRNDLGLKVVLSSVATP-DI 211 Query: 206 PERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFIL 265 + E N L N+ ++G N Y+++N R V IL Sbjct: 212 ASSFKTIHPEIDENEFALLKVGKNKTRVEGLIYKQL--HENKRLQYLYVNKRPVNSPKIL 269 Query: 266 STIRTAYAETI---PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSI 322 + + + P + PV V+ ++ +D+ + PAK+ + FR +++ + + I Sbjct: 270 NFVNALFKTVPKTDPKRKNPVFVIHIKCPYSDIDITLEPAKTLVFFRKIDLVKRCLQKMI 329 Query: 323 QKAINKKGISTSSVLSKK 340 + + Sbjct: 330 STFKGGDSEIVAKKTHRP 347 Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Query: 510 PQLLRDIIDEIIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 L+++I+D + ++ I+NI+ + AC G+I+ G + E L+ + K Sbjct: 848 QTLIKEIVDLLKTNNEIMVNTPSLIQNIVNSEACRGAIKFGDSLTKNECFAHLKNLAKCK 907 Query: 569 NSSQCNHGRPTFIKL 583 QC HGRPT L Sbjct: 908 LPFQCAHGRPTLTPL 922 >gi|315303087|ref|ZP_07873785.1| DNA mismatch repair protein MutL [Listeria ivanovii FSL F6-596] gi|313628542|gb|EFR96977.1| DNA mismatch repair protein MutL [Listeria ivanovii FSL F6-596] Length = 153 Score = 157 bits (398), Expect = 4e-36, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 1/152 (0%) Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA 502 R+ Q LL P +++ E + E L +G+ E FG N+ IR P Sbjct: 1 YREKIGEVSRELQELLVPIVLEFPADEYVRLEEQKAKLEEVGVFLESFGQNSYIIRAHPT 60 Query: 503 ILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 K + LR+IIDE + +S + ++ E+ M+C SI++ + +M LL Sbjct: 61 WFPKGQEEETLREIIDEAL-TSPSISIHKLREDTAIMMSCKKSIKANHYLTMKDMEALLD 119 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + + C HGRP I+ ++EK+F R Sbjct: 120 TLREASDPFTCPHGRPVIIQYSTYELEKMFKR 151 >gi|157418829|gb|ABV55120.1| DNA repair protein MutL-like protein [Giardia intestinalis] gi|157418831|gb|ABV55121.1| DNA repair protein MutL-like protein [Giardia intestinalis] gi|157418833|gb|ABV55122.1| DNA repair protein MutL-like protein [Giardia intestinalis] gi|157418835|gb|ABV55123.1| DNA repair protein MutL-like protein [Giardia intestinalis] gi|157418837|gb|ABV55124.1| DNA repair protein MutL-like protein [Giardia intestinalis] gi|157418839|gb|ABV55125.1| DNA repair protein MutL-like protein [Giardia intestinalis] gi|157418841|gb|ABV55126.1| DNA repair protein MutL-like protein [Giardia intestinalis] gi|157418843|gb|ABV55127.1| DNA repair protein MutL-like protein [Giardia intestinalis] gi|157418845|gb|ABV55128.1| DNA repair protein MutL-like protein [Giardia intestinalis] gi|157418847|gb|ABV55129.1| DNA repair protein MutL-like protein [Giardia intestinalis] gi|157418849|gb|ABV55130.1| DNA repair protein MutL-like protein [Giardia intestinalis] gi|157418851|gb|ABV55131.1| DNA repair protein MutL-like protein [Giardia intestinalis] gi|157418853|gb|ABV55132.1| DNA repair protein MutL-like protein [Giardia intestinalis] gi|157418855|gb|ABV55133.1| DNA repair protein MutL-like protein [Giardia intestinalis] gi|157418857|gb|ABV55134.1| DNA repair protein MutL-like protein [Giardia intestinalis] Length = 336 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 15/206 (7%) Query: 19 IIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 +I+RP KEL+EN+ DA++ + ++ + D G G+ + + R TS Sbjct: 1 VIQRPFNVAKELVENATDADAPTIRLFVSSNCYDLLMVCDTGHGIERTDYSLLCHRFATS 60 Query: 79 KIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAIS------------ 124 KI D +I +FGFRGEAL SI VS + ++S+ + I Sbjct: 61 KIETFSDIYSIQSFGFRGEALSSISYVSRMIVVSKTKNQPAYVAVYIDGKLHFDPKTLTS 120 Query: 125 GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF 184 + + + TI+ V DLF+ P R N ++S + +L +++ ++ A P + Sbjct: 121 EHTDFFISTLKADSFTIICVTDLFYAEPIRRNQIRSSKTSLDL-QELLISISAANPTREY 179 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERIS 210 + S I + + + N + IS Sbjct: 180 SISFIDNPQAIQREIQSWLNDTQHIS 205 >gi|157418827|gb|ABV55119.1| DNA repair protein MutL-like protein [Giardia intestinalis] Length = 336 Score = 157 bits (397), Expect = 5e-36, Method: Composition-based stats. Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 15/206 (7%) Query: 19 IIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 +I+RP KEL+EN+ DA++ + ++ + D G G+ + + R TS Sbjct: 1 VIQRPFNVAKELVENATDADAPTIRLFVSSNCYDLLMVCDTGHGIERTDYSLLCHRFATS 60 Query: 79 KIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAIS------------ 124 KI D +I +FGFRGEAL SI VS + ++S+ + I Sbjct: 61 KIETFSDIYSIQSFGFRGEALSSISYVSRMIVVSKTKNQPAYVAVYIDGKLHFDPKTLTS 120 Query: 125 GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF 184 + + + TI+ V DLF+ P R N ++S + +L +++ ++ A P + Sbjct: 121 EHTDFFISTLKADSFTIICVTDLFYAEPIRRNQIRSSKTSLDL-QELLISISAANPTREY 179 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERIS 210 + S I + + + N + IS Sbjct: 180 SISFIDNPQAIQREIQSWLNDTQHIS 205 >gi|85111036|ref|XP_963744.1| hypothetical protein NCU09373 [Neurospora crassa OR74A] gi|28925469|gb|EAA34508.1| predicted protein [Neurospora crassa OR74A] Length = 772 Score = 157 bits (396), Expect = 7e-36, Method: Composition-based stats. Identities = 84/425 (19%), Positives = 154/425 (36%), Gaps = 46/425 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L E + + +I P +KEL++N+LDA ++ VE +I+ ++ DNG Sbjct: 1 MPILALPEDTRRFLGSALVITSPIFLVKELLDNALDAGATTVEILISPNTVDRVEVRDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNI--HTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G++ + + TSK+S D ++ + GFRG AL S A++ + + +R + Sbjct: 61 SGISPSDFHHLGRPGHTSKLSSLKDLESVGCKSLGFRGVALASAAALAGIAICTRTSAES 120 Query: 117 TGAQIAISGEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETN-LITDVIRR 174 + S E +++ R GT V V DLF P RL SE T + ++ Sbjct: 121 VATILHFSREGVAAARGHKPAPAGTSVCVTDLFGAYPVRLKRATSEATATVLKVKGLLEC 180 Query: 175 MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA------------- 221 A+A P+V +F + + ++ + + QV+G + Sbjct: 181 YALARPQVKLSFKVLGGKQSWSYVPTSGAALKDAVVQVMGRELAAQCMLQTSPFSVSDTE 240 Query: 222 --------VELNEKSNEITLQGYTGIPTFNRGNA---NQFYVFINGRTVQDKFILSTIRT 270 + L ++ ++ + Y PT ++ ++ R + + Sbjct: 241 TKIPQTCNLPLAQQPSKFVFEAYL--PTTTADIRKICKGPFISVDSRPLSFTRGTAKKLK 298 Query: 271 AYAETIPLG-----------RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII---RN 316 A E G P + L + D NV P+K + F N ++ Sbjct: 299 AVFEKHFKGSLIPENSSKLPGSPFIRLNIRCPLGSYDPNVEPSKYDVLFHNEELVLREFE 358 Query: 317 FIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRL 376 + SI A + +S LS + + H+ T + Sbjct: 359 SFLLSIYPAKHNDAGPSSMDLSTEANGCVYDTGVADEHISTPQTQTGKGAAPTTPPTDEE 418 Query: 377 STNDL 381 N Sbjct: 419 PPNQS 423 >gi|45198744|ref|NP_985773.1| AFR226Cp [Ashbya gossypii ATCC 10895] gi|44984754|gb|AAS53597.1| AFR226Cp [Ashbya gossypii ATCC 10895] Length = 704 Score = 156 bits (394), Expect = 1e-35, Method: Composition-based stats. Identities = 74/356 (20%), Positives = 136/356 (38%), Gaps = 30/356 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAG--GGKSFFQITD 58 M I ++ ++ ++ + I P+ A+KEL++N++DA +S V + GG + + D Sbjct: 1 MGIHRIEDESKWKVVSASFIYSPTTAVKELLDNAIDAGASNVHIEVDSKTGGCDYISVRD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSH----LTLMSRP 112 +G G+ + M H TSK+ +D S T GFRGEAL + +S+ + + +R Sbjct: 61 DGNGVGVVDRHMMCLNHTTSKLRKYEDVSTCGTLGFRGEALFMLATLSNHCGTMEVSTRC 120 Query: 113 PQNNTGAQIAIS---GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS-EQVETNLI 168 G + + K S V M GT V +R L + AR + S + + I Sbjct: 121 KSERMGTRWQVDGSGEVKEGSTSSVPMPVGTTVTIRKLLHGLRARHVTISSRPRKSLDDI 180 Query: 169 TDVIRRMAIAYPKVSFTFSTIK--------SNRYKMNFQSTNGNFPERISQVIGEDFINN 220 + ++ + + + ++ F F + + ++N Q N Sbjct: 181 SQLVLQYTLVFRRIRFHFYLVSLDRADFVCQRKLQLNVDPKLSLLRVLGLQARIRKLSGN 240 Query: 221 AVELNEKSNEITLQGYTGIPTFNRGNANQFYV------FINGRTVQDKFILSTIRTAYAE 274 E TL +P+ RG +N R + L + Sbjct: 241 LHEFGPVPVTDTLSARGVLPSMTRGAEVTQTKKTIKAVALNRRPMSLSLSLGSAVNKMLN 300 Query: 275 TIPLGRY----PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 + ++ LE DP VDVN+ P K + + + +++ I Sbjct: 301 KTYRSYSLPDPTIWMVELECDPHLVDVNIEPTKDDAAISSLATLIQCLQDALEPII 356 >gi|317498492|ref|ZP_07956786.1| hypothetical protein HMPREF0996_01768 [Lachnospiraceae bacterium 5_1_63FAA] gi|316894185|gb|EFV16373.1| hypothetical protein HMPREF0996_01768 [Lachnospiraceae bacterium 5_1_63FAA] Length = 135 Score = 155 bits (393), Expect = 1e-35, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 1/131 (0%) Query: 464 DLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS 523 + E + + + LG E FG N IRE+PA L L +++D + Sbjct: 4 TVSMTEAEALTRYKDAFAGLGFTIESFGGNEYCIREVPANLYGIGERDLFMELLDAVSQE 63 Query: 524 STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + T + I + +ATMAC SI+ +++ +E+ LL E+ K N QC HGRPT IK+ Sbjct: 64 NGTLD-TEVIASKIATMACKMSIKGNQRVSLMEVEHLLDELMKLENPYQCPHGRPTIIKM 122 Query: 584 KLSDIEKLFGR 594 +I+K F R Sbjct: 123 SKYEIDKKFKR 133 >gi|313608841|gb|EFR84628.1| DNA mismatch repair protein MutL [Listeria monocytogenes FSL F2-208] Length = 145 Score = 154 bits (390), Expect = 3e-35, Method: Composition-based stats. Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 1/140 (0%) Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLR 514 Q LL P +++ E + E L +G+ E FG N+ IR P K ++LR Sbjct: 5 QELLVPIVLEFPADEYVRLEEQKAKLEEVGVFLENFGQNSFIIRAHPTWFPKDQEEEMLR 64 Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 +IIDE + + + ++ E+ M+C SI++ + + +M LL + + + C Sbjct: 65 EIIDEALSAP-SISIHKLREDTAIMMSCKKSIKANHYLTTQDMEALLDTLREASDPFTCP 123 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRP I+ ++EK+F R Sbjct: 124 HGRPVIIQYSTYELEKMFKR 143 >gi|321257301|ref|XP_003193541.1| mismatch repair-related protein [Cryptococcus gattii WM276] gi|317460011|gb|ADV21754.1| Mismatch repair-related protein, putative [Cryptococcus gattii WM276] Length = 760 Score = 154 bits (390), Expect = 3e-35, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 120/282 (42%), Gaps = 16/282 (5%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGG-GKSFFQITD 58 M I L + + I+ + EL++NSLDA ++++E + G ++ D Sbjct: 1 MPDILPLPRPTSTTLRSSIILPSLAQIFSELLQNSLDAGATKIECYVNMAKGSESLRVED 60 Query: 59 NGFGMTSEEIPMAVQRHCTSK-ISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 +G G++ + + +R TSK I + + ++GFRGEAL SI ++S L + +R Sbjct: 61 DGTGISKDGLAKIGKRFRTSKEIHEGGLGPVGSYGFRGEALASIASLSLLDITTRRASFP 120 Query: 117 TGAQIAISGEKIS----SVRPVAMNPGTIVEVRDLFFTIPARLNF--LKSEQVETNLITD 170 +I + + R +A GT V VR++F TIP R S + + Sbjct: 121 VYTKILKHSKTLFEGPNPDRHIAGGHGTTVVVREIFRTIPVRREELAATSSTLLMTQLKK 180 Query: 171 VIRRMAIAYPKVSFTFSTIKSNRY----KMNFQSTNGNFPERISQVIGEDFINNAVELNE 226 V+ +A+ P V + +S ++ + + + + + G +++ ++ Sbjct: 181 VVETLALGNPGVRWVLWEERSTGTGGLKRIMGVNASESALDVFKSLYGSALVHSVQKIRV 240 Query: 227 KSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTI 268 + + + G+ + +++IN + I + I Sbjct: 241 TAGKKKVDGFIS--ISGDVSKAHQHLYINKYPIDRGDIHTAI 280 Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 71/234 (30%), Gaps = 57/234 (24%) Query: 407 GIACAQIHQNYIISQTTDG-----LVIVDQHAAHERLIFEKMRQDFNST-------KITS 454 GI Q+ Q +I L +VDQHAA ER+ EK+ + Sbjct: 488 GIVLGQVDQKFIAVVLHTTINLTTLALVDQHAADERISVEKVLLELCEGFARDDLSVAEL 547 Query: 455 QTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA------IAIREIPAIL---- 504 I+ E R GI+ + + + +P L Sbjct: 548 TKTQPMIILTQAETRILSQPGVLPLFKRWGIRLTVPSELSQGEYVQVKVDAVPLALLNRL 607 Query: 505 ---SKKNIPQLLRDIIDEIIDSSTTYT--------------------------------L 529 + +L+R + + + + T + Sbjct: 608 GRKEGLEMTRLVRGYLPVVEEHTGEITNLVKNLEGKAMVGGEGGDIEGYGGDWGRVMRFM 667 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + + + AC G+I ++ + RL+ ++ + C HGRP+ + L Sbjct: 668 PREMLELANSKACRGAIMFEDRLSYDQCGRLVHQLSRTRFPFMCAHGRPSMVPL 721 >gi|76799858|ref|ZP_00781892.1| DNA mismatch repair protein HexB [Streptococcus agalactiae 18RS21] gi|76584789|gb|EAO61513.1| DNA mismatch repair protein HexB [Streptococcus agalactiae 18RS21] Length = 377 Score = 154 bits (388), Expect = 5e-35, Method: Composition-based stats. Identities = 73/372 (19%), Positives = 150/372 (40%), Gaps = 50/372 (13%) Query: 200 STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTV 259 S G+ + I+ + G + +E++ + + GY +P R N N + INGR + Sbjct: 5 SGTGDLRQAIAGIYGLNTAKKMIEISNADLDFEISGYVSLPELTRANRNYITLLINGRYI 64 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 ++ + +I Y + +GR+P+ V+ ++IDP DVNVHP K +R + + I Sbjct: 65 KNFLLNRSILDGYGSKLMVGRFPIAVIDIQIDPYLADVNVHPTKQEVRISKERELMSLIS 124 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP----------------------- 356 +I +++ + + ++ + S+ D +T Sbjct: 125 TAISESLKQYDLIPDALENLAKTSTRSVDKPIQTSFSLKQPGLYYDRAKNDFFIGADTVS 184 Query: 357 ----------------------KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN- 393 T + + ++ + + + S D S+ + Sbjct: 185 EPIANFTNLDKSDGSVDNDVKNSVNQGATQSPNIKYASRDQADSENFIHSQDYLSSKQSL 244 Query: 394 ----DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + ++ E++ + Q+H Y+ +Q GL I+DQHAA ER+ +E R+ Sbjct: 245 NKLVEKLDSEESSTFPELEFFGQMHGTYLFAQGNGGLYIIDQHAAQERVKYEYYREKIGE 304 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 + Q LL P + + + + E L +GI E +G N +RE P + ++ + Sbjct: 305 VDNSLQQLLVPFLFEFSSSDFLQLQEKMSLLQDVGIFLEPYGNNTFILREHPIWMKEEEV 364 Query: 510 PQLLRDIIDEII 521 + ++ D ++ Sbjct: 365 ESGIYEMCDMLL 376 >gi|149046218|gb|EDL99111.1| similar to postmeiotic segregation increased 1, isoform CRA_a [Rattus norvegicus] Length = 830 Score = 153 bits (387), Expect = 7e-35, Method: Composition-based stats. Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 4/139 (2%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ + I +KELIENSLDA ++ ++ + G +I DNG G+ Sbjct: 2 KQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGANSIDVKLENYGFDKIEIRDNGAGI 61 Query: 64 TSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTL--MSRPPQNNTGA 119 + ++P+ ++ TSKI +D + T+GFRGEAL +I V+ + SR P + Sbjct: 62 KAVDVPVMAVKYYTSKISSHEDLQTLTTYGFRGEALGAICNVAEAVIWQKSRVPDHRMAL 121 Query: 120 QIAISGEKISSVRPVAMNP 138 + + ++ V Sbjct: 122 MSVLGTAVMGNMESVERYC 140 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 50/317 (15%), Positives = 105/317 (33%), Gaps = 30/317 (9%) Query: 195 KMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQGYTGIPTF-----NRGNA 247 + +S + + V+G + N VE + ++I L+G + Sbjct: 107 VIWQKSRVPDHRMALMSVLGTAVMGNMESVERYCEDSQIHLRGLFPKHDADHNSTSLSTP 166 Query: 248 NQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLLLEIDPRQVDVNVHPAKS 304 + ++FIN R V K IL IR Y YP+ L +++ +VD+N+ P KS Sbjct: 167 ERSFIFINSRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLKIDVPSAEVDINLTPDKS 226 Query: 305 YIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTN 364 + +N + + + + S ++ +SS + + T L N Sbjct: 227 QVLLQNKESVLIALENLLMTCYGPLPTTESYENNRVDVSSANVVISETTETDV----LFN 282 Query: 365 TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA---QIHQNYIISQ 421 E + T + +D + + + E + G I+++ + Sbjct: 283 KMESSGNKYPNADTLAIPFQNDESRKNTDHHLNEQINIGHCDGHFSGEYSHINKDTFQNI 342 Query: 422 TTDGLVIVDQHAAH---------ERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECAL 472 + L + H E + E R + L + +++ + + Sbjct: 343 PRNNLSSEANQSKHSETHSAGSIEHIQGENGRSGTGENGEDGKKTLPEKALEICADDWSK 402 Query: 473 IMEHDEDLHRLGIKAER 489 + +G E Sbjct: 403 GN----VFNSMGENIEP 415 >gi|320586173|gb|EFW98852.1| DNA mismatch repair protein [Grosmannia clavigera kw1407] Length = 742 Score = 153 bits (386), Expect = 8e-35, Method: Composition-based stats. Identities = 69/456 (15%), Positives = 153/456 (33%), Gaps = 72/456 (15%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L + A +I P +KEL++N++DA ++ +E +IA ++ D+G Sbjct: 1 MSIKALPADATRLLDASSLIVDPVGLVKELVDNAIDAHATSIEVLIAPNTIDKIEVRDDG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIH----TFGFRGEALPSIGAVSHLTLMSRPPQ 114 G+ + + TSK++ +D + GFRG+ L + A+ ++ + +R Sbjct: 61 HGILRADYDFLGRPGHTSKLTCLEDLRTRTSDDASLGFRGQGLAAATALGYVAITTRTRT 120 Query: 115 NNTGAQIAISGEKISSV---------RPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVE 164 + A ++ S +P GT V V LF + P R +K Sbjct: 121 DTVAATFRLTSVSASRHSGGIVAESLKPSPAPVGTSVTVTCLFSSFPVRRCMAMKDSART 180 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN-------------FPERISQ 211 I +++ A A P++ TF + + + E Sbjct: 181 LAAIKELLYGYAFARPQLRLTFKVFQKPQMAWKYFHRPTQQVIPAEADRCGVEMREATRV 240 Query: 212 VIGEDFINNA-------------------------VELNEKSNEITLQGYTGIPTFN-RG 245 + G + + ++ + Q + P + Sbjct: 241 LFGNEVARQCQDVVVSAADLYALSAGGGQLTLAQSLPGDDTICGLVFQAFLPRPGVDLSK 300 Query: 246 NANQFYVFINGRTVQDKFILSTIRT--------------AYAETIPLGRYPVVVLLLEID 291 A +V ++GR + + + + + + L ++ Sbjct: 301 LALGGFVSVDGRPLSARHRGGIVCRLLALYRRHLARSTLSVSHQQMHINNAFIRLNIKCP 360 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNF---IIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 D NV +K+ + F N ++ + + + AI S +S+ + Sbjct: 361 AGSYDSNVESSKTDVLFVNEQLLCDAFERLCIRLYGAIEPYKSQPQSSVSRHATAGTGHV 420 Query: 349 NAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPS 384 + ++ L + + +++ + + + D S Sbjct: 421 SGSQSILRQSSIIGMSSRPAVTPYSGPIMSLDEQHS 456 >gi|332215526|ref|XP_003256895.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 2 [Nomascus leucogenys] Length = 658 Score = 153 bits (386), Expect = 9e-35, Method: Composition-based stats. Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 5/235 (2%) Query: 95 EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPA 153 EAL SI V+H+T+ ++ + + S K+ +P A N GT + V DLF+ I Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63 Query: 154 RLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVI 213 R LK+ E I +V+ R +I +SF+ + + I + Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSIHNAGISFSVKKQGETVADVRTLPNASTV-DNIRSIF 122 Query: 214 GEDFINNAVELNEKSNE--ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTA 271 G +E+ + + GY ++ +FIN R V+ + I T Sbjct: 123 GNAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCIFL-LFINHRLVESTSLRKAIETV 181 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 YA +P +P + L LEI P+ VDVNVHP K + F + I + Q I+ + Sbjct: 182 YAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKL 236 >gi|297671748|ref|XP_002813992.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Pongo abelii] Length = 658 Score = 153 bits (386), Expect = 9e-35, Method: Composition-based stats. Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 5/235 (2%) Query: 95 EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPA 153 EAL SI V+H+T+ ++ + + S K+ +P A N GT + V DLF+ I Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63 Query: 154 RLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVI 213 R LK+ E I +V+ R +I +SFT + + I + Sbjct: 64 RRKALKNPNEEYGKILEVVGRYSIHNAGISFTVKKQGETVADVRTLPNASTV-DNIRSIF 122 Query: 214 GEDFINNAVELNEKSNE--ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTA 271 G +E+ + + GY ++ +FIN R V+ + I T Sbjct: 123 GNAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCIFL-LFINHRLVESTSLRKAIETV 181 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 YA +P +P + L LEI P+ VDVNVHP K + F + I + Q I+ + Sbjct: 182 YAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKL 236 >gi|50284983|ref|XP_444920.1| hypothetical protein [Candida glabrata CBS 138] gi|49524222|emb|CAG57813.1| unnamed protein product [Candida glabrata] Length = 679 Score = 153 bits (386), Expect = 1e-34, Method: Composition-based stats. Identities = 91/509 (17%), Positives = 184/509 (36%), Gaps = 36/509 (7%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAG--GGKSFFQITD 58 M I+ + +I A I P A++ELI+NS+D+ + I GG + + D Sbjct: 1 MPIKGIIADEKWKIFASSFIVEPKAAVRELIDNSIDSGCQNIYVSIDSKTGGCEYISVRD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGA----VSHLTLMSRP 112 +G G+ + + + TSKI+ DD I T GFRGEAL I V L ++++ Sbjct: 61 DGPGVPQPDRKLMCLNNTTSKINSLDDLDKISTLGFRGEALFLIANLCCEVGTLEIITKC 120 Query: 113 PQNNTGAQIAISGE---KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE-QVETNLI 168 + G + I K SVR GT+V +R L +R S+ + + Sbjct: 121 KDESVGEKWYIQKNGSIKPKSVRKAPATTGTVVTLRKLLGGFKSREIDQSSKARKTIEDL 180 Query: 169 TDVIRRMAIAYPKVSFTF-----STIKSNRYKMNFQSTNGNFPE----RISQVIGEDFIN 219 ++ A+ + + F+F + S K S N + + + Sbjct: 181 KTILYHYALNFRNIRFSFELVSLNKNGSIAQKQLQLSVAPNLTRPRLLSLIANLRKPTNI 240 Query: 220 NAVEL------NEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILS----TIR 269 N VE ++ ++ L + ++ +N R + K + Sbjct: 241 NFVENASLEITDKIDIQLILPTMIPQSDAVNVKKSYKFLSVNNRALSRKLAFGKEFDRML 300 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 ++ + L V + + +P+ +DVN+ P K I ++ T + + I+ + +K Sbjct: 301 SSIYRRLQLLEPNVWYVNIISEPQLIDVNIEPEKDDILLKDETKVIQKMDNIIELYLREK 360 Query: 330 GISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNT--QEKLFLQENRLSTNDLLPSDDP 387 ++ + +S SF Q A + + ++ S Q + + + Sbjct: 361 -LNINPTVSITNSPSFKQFAANTSVMLEHNESCDEPVDQSTMPILTPTSKNITEAIIESE 419 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDF 447 + + + + +++++ I + L D +H K+ Sbjct: 420 NGNNSEPRITYEADSTNMGFKSISEVNRTGISNSQIHNL-PNDSSNSH-FDNTTKLSHGI 477 Query: 448 NSTKITSQTLLTPEIIDLLEGECALIMEH 476 N + S + + + E+ Sbjct: 478 NQDNLNSSDQVNTQQNTFRNSMTHVGHEY 506 >gi|263191589|ref|NP_001161089.1| DNA mismatch repair protein Mlh1 isoform 2 [Homo sapiens] Length = 658 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 5/235 (2%) Query: 95 EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPA 153 EAL SI V+H+T+ ++ + + S K+ +P A N GT + V DLF+ I Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63 Query: 154 RLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVI 213 R LK+ E I +V+ R ++ +SF+ + + I + Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTV-DNIRSIF 122 Query: 214 GEDFINNAVELNEKSNE--ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTA 271 G +E+ + + GY ++ +FIN R V+ + I T Sbjct: 123 GNAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCIFL-LFINHRLVESTSLRKAIETV 181 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 YA +P +P + L LEI P+ VDVNVHP K + F + I + Q I+ + Sbjct: 182 YAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKL 236 >gi|332816400|ref|XP_001170253.2| PREDICTED: DNA mismatch repair protein Mlh1 isoform 2 [Pan troglodytes] Length = 658 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 63/235 (26%), Positives = 101/235 (42%), Gaps = 5/235 (2%) Query: 95 EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPA 153 EAL SI V+H+T+ ++ + + S K+ +P A N GT + V DLF+ I Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63 Query: 154 RLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVI 213 R LK+ E I +V+ R +I +SF+ + + I + Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSIHNAGISFSVKKQGETVADVRTLPNASTV-DNIRSIF 122 Query: 214 GEDFINNAVELNEKSNE--ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTA 271 G +E+ + + GY ++ +FIN R V+ + I T Sbjct: 123 GNAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCIFL-LFINHRLVESTSLRKAIETV 181 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 YA +P +P + L LEI P+ VDVNVHP K + F + I + Q I+ + Sbjct: 182 YAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKL 236 >gi|194391310|dbj|BAG60773.1| unnamed protein product [Homo sapiens] Length = 658 Score = 152 bits (385), Expect = 1e-34, Method: Composition-based stats. Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 5/235 (2%) Query: 95 EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS-SVRPVAMNPGTIVEVRDLFFTIPA 153 EAL SI V+H+T+ ++ + + S K+ +P A N GT + V DLF+ I Sbjct: 4 EALASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIAT 63 Query: 154 RLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVI 213 R LK+ E I +V+ R ++ +SF+ + + I + Sbjct: 64 RRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGETVADVRTLPNASTV-DNIRSIF 122 Query: 214 GEDFINNAVELNEKSNE--ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTA 271 G +E+ + + GY ++ +FIN R V+ + I T Sbjct: 123 GNAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCIFL-LFINHRLVESTSLRKAIETV 181 Query: 272 YAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 YA +P +P + L LEI P+ VDVNVHP K + F + I + Q I+ + Sbjct: 182 YAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKL 236 >gi|323353916|gb|EGA85769.1| Mlh2p [Saccharomyces cerevisiae VL3] Length = 602 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 73/390 (18%), Positives = 158/390 (40%), Gaps = 32/390 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAG--GGKSFFQITD 58 M I +LS + +I + I P A++EL++NS+D+ + +V + GG + + D Sbjct: 1 MTIHQLSPESQWKIVSSSFIYGPVAAVRELLDNSIDSGAKKVFIDVDSTTGGCEYISVKD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSH----LTLMSRP 112 +G G+ + P + TSK+S D S + T GFRGEAL + + + + + ++ Sbjct: 61 DGSGVDIIDRPSMCLEYTTSKMSSLGDISILTTLGFRGEALFLLSNLCNQKGSMQVETKT 120 Query: 113 PQNNTGAQIAISG---EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS-EQVETNLI 168 + G + + V+ GT V +R L + AR + S + + + Sbjct: 121 ADDVIGEKWLVDSKGGITNGKRYKVSCPVGTTVTLRKLLGGLRARYLEISSRPRKTFDEL 180 Query: 169 TDVIRRMAIAYPKVSFTFSTI----------KSNRYKMNFQSTNGNFPERISQVIGE--- 215 +I ++ + + F FS + K + ++ + + ++++ Sbjct: 181 IYLINHYSLIHRNIRFYFSLVSLQKNGAIERKQMQETLDPKISRARSLSLLARLKKPVPL 240 Query: 216 --DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 N V + + ++ L ++ +N R + + Sbjct: 241 NFIVEENFVIDEKINLDLILPRMVPESDVINIKRRFKFLSVNERALSLNLETGKTISKLL 300 Query: 274 ETIPLGRY---PVVV-LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 +I P+V + L D + +DVN+ P K+ + ++ +I I ++ + ++ Sbjct: 301 SSIYRDFSLLDPMVWFINLNCDTKLLDVNIEPEKNDVMIKSFEVIFKKIENKLKLLLEER 360 Query: 330 -GISTSSVLSKKMISSFHQDNAPKTHLPKY 358 GI T+ + K + S ++ +P +P Sbjct: 361 IGIETNMLGDKHVQPSINEKTSPALVIPTP 390 >gi|256269178|gb|EEU04510.1| Mlh2p [Saccharomyces cerevisiae JAY291] Length = 695 Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats. Identities = 73/390 (18%), Positives = 158/390 (40%), Gaps = 32/390 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAG--GGKSFFQITD 58 M I +LS + +I + I P A++EL++NS+D+ + +V + GG + + D Sbjct: 1 MTIHQLSPESQWKIVSSSFIYGPVAAVRELLDNSIDSGAKKVFIDVDSTTGGCEYISVKD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSH----LTLMSRP 112 +G G+ + P + TSK+S D S + T GFRGEAL + + + + + ++ Sbjct: 61 DGSGVDIIDRPSMCLEYTTSKMSSLGDISILTTLGFRGEALFLLSNLCNQKGSMQVETKT 120 Query: 113 PQNNTGAQIAISG---EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS-EQVETNLI 168 + G + + V+ GT V +R L + AR + S + + + Sbjct: 121 ADDVIGEKWLVDSKGGITNGKRYKVSCPVGTTVTLRKLLGGLRARYLEISSRPRKTFDEL 180 Query: 169 TDVIRRMAIAYPKVSFTFSTI----------KSNRYKMNFQSTNGNFPERISQVIGE--- 215 +I ++ + + F FS + K + ++ + + ++++ Sbjct: 181 IYLINHYSLIHRNIRFYFSLVSLQKNGAIERKQMQETLDPKISRARSLSLLARLKKPVPL 240 Query: 216 --DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 N V + + ++ L ++ +N R + + Sbjct: 241 NFIVEENFVIDEKINLDLILPRMVPESDVINIKRRFKFLSVNERALSLNLETGKTISKLL 300 Query: 274 ETIPLGRY---PVVV-LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 +I P+V + L D + +DVN+ P K+ + ++ +I I ++ + ++ Sbjct: 301 SSIYRDFSLLDPMVWFINLNCDTKLLDVNIEPEKNDVMIKSFEVIFKKIENKLKLLLEER 360 Query: 330 -GISTSSVLSKKMISSFHQDNAPKTHLPKY 358 GI T+ + K + S ++ +P +P Sbjct: 361 IGIETNMLGDKHVQPSINEKTSPALVIPTP 390 >gi|151941204|gb|EDN59582.1| conserved protein [Saccharomyces cerevisiae YJM789] gi|190406075|gb|EDV09342.1| hypothetical protein SCRG_05022 [Saccharomyces cerevisiae RM11-1a] Length = 695 Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats. Identities = 73/390 (18%), Positives = 158/390 (40%), Gaps = 32/390 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAG--GGKSFFQITD 58 M I +LS + +I + I P A++EL++NS+D+ + +V + GG + + D Sbjct: 1 MTIHQLSPESQWKIVSSSFIYGPVAAVRELLDNSIDSGAKKVFIDVDSTTGGCEYISVKD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSH----LTLMSRP 112 +G G+ + P + TSK+S D S + T GFRGEAL + + + + + ++ Sbjct: 61 DGSGVDIIDRPSMCLEYTTSKMSSLGDISILTTLGFRGEALFLLSNLCNQKGSMQVETKT 120 Query: 113 PQNNTGAQIAISG---EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS-EQVETNLI 168 + G + + V+ GT V +R L + AR + S + + + Sbjct: 121 ADDVIGEKWLVDSKGGITNGKRYKVSCPVGTTVTLRKLLGGLRARYLEISSRPRKTFDEL 180 Query: 169 TDVIRRMAIAYPKVSFTFSTI----------KSNRYKMNFQSTNGNFPERISQVIGE--- 215 +I ++ + + F FS + K + ++ + + ++++ Sbjct: 181 IYLINHYSLIHRNIRFYFSLVSLQKNGAIERKQMQETLDPKISRARSLSLLARLKKPVPL 240 Query: 216 --DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 N V + + ++ L ++ +N R + + Sbjct: 241 NFIVEENFVIDEKINLDLILPRMVPESDVINIKRRFKFLSVNERALSLNLETGKTISKLL 300 Query: 274 ETIPLGRY---PVVV-LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 +I P+V + L D + +DVN+ P K+ + ++ +I I ++ + ++ Sbjct: 301 SSIYRDFSLLDPMVWFINLNCDTKLLDVNIEPEKNDVMIKSFEVIFKKIENKLKLLLEER 360 Query: 330 -GISTSSVLSKKMISSFHQDNAPKTHLPKY 358 GI T+ + K + S ++ +P +P Sbjct: 361 IGIETNMLGDKHVQPSINEKTSPALVIPTP 390 >gi|66358254|ref|XP_626305.1| PMS1'MutL family ATpase' [Cryptosporidium parvum Iowa II] gi|46228008|gb|EAK88928.1| PMS1'MutL family ATpase' [Cryptosporidium parvum Iowa II] Length = 971 Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats. Identities = 89/566 (15%), Positives = 194/566 (34%), Gaps = 96/566 (16%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 +KLS++ ++I + ++I IKEL++N++DA + + + G S ++ DNG G+ Sbjct: 19 KKLSKEDQDRICSQQVITELQDCIKELVDNAIDAGCTEILISLTDFGSSTIEVLDNGKGI 78 Query: 64 TSEEIPMAVQRHCTSK------ISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQ-- 114 E++ +R TSK I +D T GFRGE L SI S + + ++ Sbjct: 79 --EDLNKIGERGVTSKLENFDNIHEDL---STLGFRGEGLNSIINSSEIVEIDTKYDNKE 133 Query: 115 ------------NNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSE 161 + + GT + V LF +R ++ Sbjct: 134 NKIVFEKGKCLIEELIIENKNQNSDKFHKYHFSSKSGTRIRVIGLFLPYISRRTQFLRNI 193 Query: 162 QVETNLITDVIRRMAIAYPKVSF---------------------------TFSTIKSNRY 194 +++ + +I AI YP + F + + + Sbjct: 194 RLQLKSLIVLIEEYAICYPMIRFLLSNRTLSDTEKEKIHKRLLIGESSEIKYQSNQIQSE 253 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI---------------------TL 233 + + + E + G+ + N+++ + + Sbjct: 254 LIMTRGKVSSQKEVAQYIWGKSVLGNSLDFKLEGEVFVPKLQNMDSKIQDESLVGGKWII 313 Query: 234 QGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP----LGRYPVVVLLLE 289 G+ R + + +N R V +S + ++ T+ YP V+ + Sbjct: 314 SGFISSLDKGRPSPDHQIFTVNNRPVDPIKRISRVISSIHSTLSSFNNRKLYPAFVINIH 373 Query: 290 IDPRQVDVNVHPAKSYIRF--RNPTIIRNFIIQSIQKAINKKGISTSSVLSKK------- 340 + +D+NV P K + + T++ I Q +Q + + Sbjct: 374 LPQSLLDINVTPNKRIVMLPAKVETVLAENIQQFLQDSYQNNIPIKREEFMENRYQNSIL 433 Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTN--DLLPSDDPTYSEDNDPVEE 398 S QD+ +S ++K+ L N L+ N + + + +SE++ + E Sbjct: 434 NYPSTSQDHLTTEISQSQISSSQKPKDKVVLSYNHLTDNLSNSGKAPELVFSEESSRLGE 493 Query: 399 ----SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK--MRQDFNSTKI 452 + + +I + + + Q +R ++ +R+ + + + Sbjct: 494 KKINEDEKNNNESENKDEISNTSFSESKMESIELSHQTIGTKRHRSDEVSLREFYPNDFL 553 Query: 453 TSQTLLTPEIIDLLEGECALIMEHDE 478 T+Q + +L + E + Sbjct: 554 TNQEKDSNIRKIVLPSFNENMDEGMD 579 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 9/119 (7%) Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 + I+DQHA+ E+ FEK+ D ++ I +Q L++P + L + L++ + + + G Sbjct: 775 HIFIIDQHASDEKARFEKLNSDLSN--IQTQKLISPLSVSLTPSQEQLVISYKDIFEQNG 832 Query: 485 IKAERFGPNA-----IAIREIPAILSKKNIPQLLRDIIDEIIDSS-TTYTLQDRIENIL 537 + F N+ I + ++P IL D++ +I + D IL Sbjct: 833 FRF-IFNSNSEIGSRIQLTQLPVILGIPLKQIDFLDLLSQINKYKVRVSIIDDSKSKIL 890 >gi|260801094|ref|XP_002595431.1| hypothetical protein BRAFLDRAFT_69263 [Branchiostoma floridae] gi|229280677|gb|EEN51443.1| hypothetical protein BRAFLDRAFT_69263 [Branchiostoma floridae] Length = 219 Score = 150 bits (380), Expect = 4e-34, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 86/204 (42%), Gaps = 7/204 (3%) Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S + +++ E + Q + +II++ L I+DQHA E+ FE + Sbjct: 11 SPSDNQAAEDELRREISKDKFTQMEILGQFNLGFIIARLGGDLFIIDQHATDEKYNFEML 70 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP----NAIAIRE 499 ++ +T + Q L+ P+ + L +++M++ + + G + + + Sbjct: 71 QR---NTVLQGQRLIQPQSLHLTAANESILMDNMDIFRKNGFEFTIQEDAPCTERVKLVS 127 Query: 500 IPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 +P + + + ++I + D+ R+ + A+ AC S+ G + EM + Sbjct: 128 MPVSKNWTFGKEDIEELIFMLSDAPGVMCRPSRVRQMFASRACRKSVMIGTALNRGEMQQ 187 Query: 560 LLREMEKNPNSSQCNHGRPTFIKL 583 LL M + C HGRPT L Sbjct: 188 LLTHMGEIEQPWNCPHGRPTMRHL 211 >gi|6323063|ref|NP_013135.1| Mlh2p [Saccharomyces cerevisiae S288c] gi|74627237|sp|Q07980|MLH2_YEAST RecName: Full=DNA mismatch repair protein MLH2; AltName: Full=MutL protein homolog 2 gi|1360354|emb|CAA97559.1| unnamed protein product [Saccharomyces cerevisiae] gi|285813457|tpg|DAA09353.1| TPA: Mlh2p [Saccharomyces cerevisiae S288c] Length = 695 Score = 150 bits (380), Expect = 5e-34, Method: Composition-based stats. Identities = 73/390 (18%), Positives = 158/390 (40%), Gaps = 32/390 (8%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAG--GGKSFFQITD 58 M I +LS + +I + I P A++EL++NS+D+ + +V + GG + + D Sbjct: 1 MTIHQLSPESQWKIVSSSFIYGPVAAVRELLDNSIDSGAKKVFIDVDSTTGGCEYISVKD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSH----LTLMSRP 112 +G G+ + P + TSK+S D S + T GFRGEAL + + + + + ++ Sbjct: 61 DGSGVDIIDRPSMCLEYTTSKMSSLGDISILTTLGFRGEALFLLSNLCNQKGSMQVETKT 120 Query: 113 PQNNTGAQIAISG---EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS-EQVETNLI 168 + G + + V+ GT V +R L + AR + S + + + Sbjct: 121 ADDVIGEKWLVDSKGGITNGKRYKVSCPVGTTVILRKLLGGLRARYLEISSRPRKTFDEL 180 Query: 169 TDVIRRMAIAYPKVSFTFSTI----------KSNRYKMNFQSTNGNFPERISQVIGE--- 215 +I ++ + + F FS + K + ++ + + ++++ Sbjct: 181 IYLINHYSLIHRNIRFYFSLVSLQKNGAIERKQMQETLDPKISRARSLSLLARLKKPVPL 240 Query: 216 --DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYA 273 N V + + ++ L ++ +N R + + Sbjct: 241 NFIVEENFVIDEKINLDLILPRMVPESDVINIKRRFKFLSVNERALSLNLETGKTISKLL 300 Query: 274 ETIPLGRY---PVVV-LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK 329 +I P+V + L D + +DVN+ P K+ + ++ +I I ++ + ++ Sbjct: 301 SSIYRDFSLLDPMVWFINLNCDTKLLDVNIEPEKNDVMIKSFEVIFKKIENKLKLLLEER 360 Query: 330 -GISTSSVLSKKMISSFHQDNAPKTHLPKY 358 GI T+ + K + S ++ +P +P Sbjct: 361 IGIETNMLGDKHVQPSINEKTSPALVIPTP 390 >gi|330945642|gb|EGH47128.1| DNA mismatch repair protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 290 Score = 150 bits (380), Expect = 5e-34, Method: Composition-based stats. Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 6/259 (2%) Query: 139 GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNF 198 GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A V+F ++ Sbjct: 3 GTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLRHNGKTVLSLHE 62 Query: 199 QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRT 258 + R+S + G F+ A+ + + N + L G+ G+PTF+R A+ Y F+NGR Sbjct: 63 AHDDTARARRVSAICGPGFLEQALPIEIERNGLHLWGWVGLPTFSRSQADLQYFFVNGRA 122 Query: 259 VQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI 318 V+DK + +R AY + + GR+P VL E+DP VDVNVHP K +RFR+ ++ +F+ Sbjct: 123 VRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAAVDVNVHPTKHEVRFRDGRMVHDFL 182 Query: 319 IQSIQKAI------NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ 372 ++ +A+ N G S V + + P+ + L Q + F + Sbjct: 183 YGTLYRALGDVRPENHLGGSVPVVAETRPSGPEAGEFGPQGEMRLANNVLEQPQGEPFSR 242 Query: 373 ENRLSTNDLLPSDDPTYSE 391 T Sbjct: 243 PAAGGGAGSGYQYQYTPRP 261 >gi|302654774|ref|XP_003019186.1| hypothetical protein TRV_06792 [Trichophyton verrucosum HKI 0517] gi|291182893|gb|EFE38541.1| hypothetical protein TRV_06792 [Trichophyton verrucosum HKI 0517] Length = 180 Score = 150 bits (380), Expect = 5e-34, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 5/123 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + + I + + S +KEL++N+LDA ++ + I+ Q+ DNG Sbjct: 45 MSIVALEDPAVRAIGSTSALPDSSSVVKELLDNALDAGATSIFIEISLNTLDIIQVKDNG 104 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNI--HTFGFRGEALPSIGAVSH-LTLMSRPPQN 115 G+ + +A +++ TSKI ++D N+ + GFRG+AL SI +S + + +R P+ Sbjct: 105 SGILPSDRSLACKQNYTSKIQTTEDLKNVGGRSLGFRGQALASIAEMSDAMYITTRVPEE 164 Query: 116 NTG 118 Sbjct: 165 QVA 167 >gi|302507238|ref|XP_003015580.1| hypothetical protein ARB_05891 [Arthroderma benhamiae CBS 112371] gi|291179148|gb|EFE34935.1| hypothetical protein ARB_05891 [Arthroderma benhamiae CBS 112371] Length = 180 Score = 150 bits (379), Expect = 5e-34, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 5/123 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L + + I + + S +KEL++N+LDA ++ + I+ Q+ DNG Sbjct: 45 MSIVALEDPAVRAIGSTSALPDSSSVVKELLDNALDAGATSIFIEISLNTLDIIQVKDNG 104 Query: 61 FGMTSEEIPMAVQRHCTSKI--SDDFSNI--HTFGFRGEALPSIGAVSH-LTLMSRPPQN 115 G+ + +A +++ TSKI +D N+ + GFRG+AL SI +S + + +R P+ Sbjct: 105 SGILPSDRSLACKQNYTSKIQTKEDLKNVGGRSLGFRGQALASIAEMSDAMYITTRVPEE 164 Query: 116 NTG 118 Sbjct: 165 QVA 167 >gi|58266232|ref|XP_570272.1| mismatch repair-related protein [Cryptococcus neoformans var. neoformans JEC21] gi|57226505|gb|AAW42965.1| mismatch repair-related protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 759 Score = 150 bits (379), Expect = 6e-34, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 121/283 (42%), Gaps = 18/283 (6%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGG-GKSFFQITD 58 M I L + + I+ + EL++NSLDAE++++E + G ++ D Sbjct: 1 MPNILPLPRPTSTTLRSSIILPSLAQIFSELLQNSLDAEATKIECYVNLAKGNETLRVED 60 Query: 59 NGFGMTSEEIPMAVQRHCTSK-ISDD-FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 NG G++ + +R TSK I + + ++GFRGEAL SI ++S L + +R Sbjct: 61 NGTGISKNGLAKIGKRFRTSKEIHEGGLGPVGSYGFRGEALASIASLSLLDITTRRASFP 120 Query: 117 TGAQIAISGEKIS----SVRPVAMNPGTIVEVRDLFFTIPARLNF--LKSEQVETNLITD 170 +I + + R +A GT V VR++F TIP R S + + + Sbjct: 121 VYTKILRHSKTLFEGPNPDRHIAGGQGTTVVVREIFRTIPVRREELAATSSTLLMSQLKK 180 Query: 171 VIRRMAIAYPKVSF-----TFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN 225 V+ +A+ P V + +T + M+ +++ + + G + + ++ Sbjct: 181 VVETLALGNPGVRWVLWEEKTTTTGGLKRIMSINASDSAL-DVFKTLYGGALVQSVQKIK 239 Query: 226 EKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTI 268 + + + G+ + +++IN + + + I Sbjct: 240 VTAGKRKVDGFIS--ISGDVSKAHQHLYINNYPIDRGDVHTAI 280 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 68/210 (32%), Gaps = 52/210 (24%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST-------KITSQTLLTPEIIDLLEGECALIMEHDE 478 L ++DQHAA ER+ EK+ + I+ E + Sbjct: 512 LALIDQHAADERVAVEKVLLELCEGFAKDDLLVAELAKTRPMIILTQAEAQILSQPWVLS 571 Query: 479 DLHRLGIKAE-----RFGPN-AIAIREIPAIL-------SKKNIPQLLRDIIDEIIDSST 525 R GI+ G + + +P L + +L+R + + + ++ Sbjct: 572 LFKRWGIRLTMPPGLSHGEYIQVKVETVPLSLLSRLGRKEGSEMTRLVRGYLPIVAEHAS 631 Query: 526 TYTL--------------------------------QDRIENILATMACYGSIRSGRKMQ 553 T+ + + + AC G+I ++ Sbjct: 632 EITVLVENLEGKAMEDNEGGDTEGYGGDWGRLMRFMPREMLELANSKACRGAIMFEDRLS 691 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + +RL++++ + C HGRP+ + L Sbjct: 692 HDQCDRLIQQLSQTRFPFMCAHGRPSMVPL 721 >gi|148687082|gb|EDL19029.1| postmeiotic segregation increased 2 (S. cerevisiae), isoform CRA_a [Mus musculus] Length = 676 Score = 150 bits (379), Expect = 7e-34, Method: Composition-based stats. Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 9/190 (4%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + + Q + +I+++ + L +VDQHAA E+ FE ++Q T + +Q L Sbjct: 481 EISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQH---TVLQAQRL 537 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQL 512 +TP+ ++L A+++E+ E + G A I +P + PQ Sbjct: 538 ITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLI-SLPTSKNWTFGPQD 596 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + ++I + DS R+ + A+ AC S+ G + + EM +L+ M + + Sbjct: 597 IDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNASEMKKLITHMGEMDHPWN 656 Query: 573 CNHGRPTFIK 582 C HGRPT Sbjct: 657 CPHGRPTMRH 666 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 23/219 (10%) Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE--------------- 226 VS T + R + S + E I V G+ + + + + Sbjct: 17 VSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLIPFVQLPPSDAVCEEYGLST 76 Query: 227 ---KSNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY 281 N + G+ T G + ++ + FIN R + + Y +Y Sbjct: 77 SRTPQNLFYVSGFISQCTHGAGRSATDRQFFFINQRPCDPAKVSKLVNEVYHMY-NRHQY 135 Query: 282 PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--ISTSSVLSK 339 P VVL + +D VD+NV P K I + ++ + S+ + ++ + Sbjct: 136 PFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDANKLNVNQQPLL 195 Query: 340 KMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 + + + + + P + K E R+++ Sbjct: 196 DVEGNLVKLHTAELEKPVPGKQDNSPSLKSTADEKRVAS 234 >gi|114612037|ref|XP_001141578.1| PREDICTED: PMS2 postmeiotic segregation increased 2 isoform 1 [Pan troglodytes] Length = 759 Score = 150 bits (378), Expect = 8e-34, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 133/354 (37%), Gaps = 20/354 (5%) Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD- 296 G ++ A+ + V + +++ + P+ + Sbjct: 409 GSHCSSKCVASTPGDRGSQEHVDSQEKAPETDDCFSDVDCHSNQEDTGCKFRVLPQPTNL 468 Query: 297 --VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 N K + I ++ + + ++ ++ K+ + + Sbjct: 469 ATPNTKRFKKEEILSSSD-ICQKLVNTQDVSASQVDVAV------KINKKVVPLDFSMSS 521 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 L K L + ++ ++N + + +E ++ +E T + Q + Sbjct: 522 LAKRIKQLHHEAQQSEGEQNYRKFRAKICPGENQAAE-DELRKEISKTMFAEMEIIGQFN 580 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +II++ + + IVDQHA E+ FE ++Q T + Q L+ P+ ++L A+++ Sbjct: 581 LGFIITKLNEDIFIVDQHATDEKYNFEMLQQH---TVLQGQRLIAPQTLNLTAVNEAVLI 637 Query: 475 EHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 E+ E + G A I +P + PQ + ++I + DS Sbjct: 638 ENLEIFRKNGFDFVIDENAPVTERAKLI-SLPTSKNWTFGPQDVDELIFMLSDSPGVMCR 696 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R++ + A+ AC S+ G + + EM +L+ M + + C HGRPT + Sbjct: 697 PSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHI 750 Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 88/251 (35%), Gaps = 25/251 (9%) Query: 102 AVSHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLK 159 + S +T+ + G ++ KI P GT V V+ LF T+P R F + Sbjct: 13 SHSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQR 72 Query: 160 SEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDF 217 + + E + V+ I + + + + T G+ E I V G+ Sbjct: 73 NIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQ 132 Query: 218 INNAVELNEK------------------SNEITLQGYTGIPT--FNRGNANQFYVFINGR 257 + + + + N + G+ R + ++ + FIN R Sbjct: 133 LQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCARGVGRSSTDRQFFFINRR 192 Query: 258 TVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 + + Y +YP VVL + +D VD+NV P K I + ++ Sbjct: 193 PCDPAKVCRLVNEVYHMY-NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAV 251 Query: 318 IIQSIQKAINK 328 + S+ + Sbjct: 252 LKTSLIGMFDS 262 >gi|114612039|ref|XP_518964.2| PREDICTED: PMS2 postmeiotic segregation increased 2 isoform 3 [Pan troglodytes] Length = 727 Score = 150 bits (378), Expect = 8e-34, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 133/354 (37%), Gaps = 20/354 (5%) Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD- 296 G ++ A+ + V + +++ + P+ + Sbjct: 377 GSHCSSKCVASTPGDRGSQEHVDSQEKAPETDDCFSDVDCHSNQEDTGCKFRVLPQPTNL 436 Query: 297 --VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 N K + I ++ + + ++ ++ K+ + + Sbjct: 437 ATPNTKRFKKEEILSSSD-ICQKLVNTQDVSASQVDVAV------KINKKVVPLDFSMSS 489 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 L K L + ++ ++N + + +E ++ +E T + Q + Sbjct: 490 LAKRIKQLHHEAQQSEGEQNYRKFRAKICPGENQAAE-DELRKEISKTMFAEMEIIGQFN 548 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +II++ + + IVDQHA E+ FE ++Q T + Q L+ P+ ++L A+++ Sbjct: 549 LGFIITKLNEDIFIVDQHATDEKYNFEMLQQH---TVLQGQRLIAPQTLNLTAVNEAVLI 605 Query: 475 EHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 E+ E + G A I +P + PQ + ++I + DS Sbjct: 606 ENLEIFRKNGFDFVIDENAPVTERAKLI-SLPTSKNWTFGPQDVDELIFMLSDSPGVMCR 664 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R++ + A+ AC S+ G + + EM +L+ M + + C HGRPT + Sbjct: 665 PSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHI 718 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 80/231 (34%), Gaps = 24/231 (10%) Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAY 179 + KI P GT V V+ LF T+P R F ++ + E + V+ I Sbjct: 1 MFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIIS 60 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEK---------- 227 + + + + T G+ E I V G+ + + + + Sbjct: 61 AGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEY 120 Query: 228 --------SNEITLQGYTGIPT--FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP 277 N + G+ R + ++ + FIN R + + Y Sbjct: 121 GLSCSDALHNLFYISGFISQCARGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMY-N 179 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 +YP VVL + +D VD+NV P K I + ++ + S+ + Sbjct: 180 RHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDS 230 >gi|157787060|ref|NP_001099378.1| mismatch repair endonuclease PMS2 [Rattus norvegicus] gi|149034928|gb|EDL89648.1| postmeiotic segregation increased 2 (S. cerevisiae) (predicted), isoform CRA_a [Rattus norvegicus] gi|149034929|gb|EDL89649.1| postmeiotic segregation increased 2 (S. cerevisiae) (predicted), isoform CRA_a [Rattus norvegicus] Length = 542 Score = 149 bits (377), Expect = 1e-33, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 9/191 (4%) Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 E + + Q + +I+++ + L +VDQHAA E+ FE ++Q T + +Q L Sbjct: 347 EIRKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQH---TVLQAQRL 403 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQL 512 +TP+ ++L A+++E+ E + G A I +P + PQ Sbjct: 404 ITPQTLNLTAVNEAVLIENLEIFRKNGFDFIIDEDAPVTERAKLI-SLPTSKNWTFGPQD 462 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + ++I + DS R+ + A+ AC S+ G + + EM +L+ M + + Sbjct: 463 IDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALSASEMKKLISHMGEMDHPWN 522 Query: 573 CNHGRPTFIKL 583 C HGRPT + Sbjct: 523 CPHGRPTMRHI 533 >gi|58737041|dbj|BAD89429.1| postmeiotic segregation increased 2 nirs variant 5 [Homo sapiens] Length = 756 Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 133/354 (37%), Gaps = 20/354 (5%) Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD- 296 G + A+ + V + ++++ + P+ + Sbjct: 406 GSHCSSEYAASSPGDRGSQEHVDSQEKAPETDDSFSDVDCHSNQEDTGCKFRVLPQPTNL 465 Query: 297 --VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 N K + I ++ + + ++ ++ K+ + + Sbjct: 466 ATPNTKRFKKEEILSSSD-ICQKLVNTQDMSASQVDVAV------KINKKVVPLDFSMSS 518 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 L K L + ++ ++N + + +E ++ +E T + Q + Sbjct: 519 LAKRIKQLHHEAQQSEGEQNYRKFRAKICPGENQAAE-DELRKEISKTMFAEMEIIGQFN 577 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 +II++ + + IVDQHA E+ FE ++Q T + Q L+ P+ ++L A+++ Sbjct: 578 LGFIITKLNEDIFIVDQHATDEKYNFEMLQQH---TVLQGQRLIAPQTLNLTAVNEAVLI 634 Query: 475 EHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL 529 E+ E + G A I +P + PQ + ++I + DS Sbjct: 635 ENLEIFRKNGFDFVIDENAPVTERAKLI-SLPTSKNWTFGPQDVDELIFMLSDSPGVMCR 693 Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R++ + A+ AC S+ G + + EM +L+ M + + C HGRPT + Sbjct: 694 PSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHI 747 Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 87/248 (35%), Gaps = 25/248 (10%) Query: 105 HLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQ 162 +T+ + G ++ KI P GT V V+ LF T+P R F ++ + Sbjct: 13 DVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIK 72 Query: 163 VETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINN 220 E + V+ I + + + + T G+ E I V G+ + + Sbjct: 73 KEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQS 132 Query: 221 AVELNEK------------------SNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQ 260 + + N + G+ T G + ++ + FIN R Sbjct: 133 LIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCD 192 Query: 261 DKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQ 320 + + Y +YP VVL + +D VD+NV P K I + ++ + Sbjct: 193 PAKVCRLVNEVYHMY-NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKT 251 Query: 321 SIQKAINK 328 S+ + Sbjct: 252 SLIGMFDS 259 >gi|254577527|ref|XP_002494750.1| ZYRO0A08800p [Zygosaccharomyces rouxii] gi|238937639|emb|CAR25817.1| ZYRO0A08800p [Zygosaccharomyces rouxii] Length = 616 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 146/362 (40%), Gaps = 34/362 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAG--GGKSFFQITD 58 M I+ ++ +I + +I P A+KELI+N++D+ + + I G + ++ D Sbjct: 1 MAIKPINFDASGKIGSSPLILSPISAVKELIDNAIDSGAKNIYIDIDEQTSGSEYIRVRD 60 Query: 59 NGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSH----LTLMSRP 112 +G G+ + H TSKIS+ + + + T GFRG+AL S+ ++ + ++++ Sbjct: 61 DGSGIDGAGRQLMCLNHTTSKISNPQEIAQVSTLGFRGQALFSLASLCKAEGSMEVITKC 120 Query: 113 PQNNTGAQIAIS---GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLK-SEQVETNLI 168 ++ G + ++ K S + + GT + +R LF + AR + Sbjct: 121 RKDAVGEKWFVNGDGSIKNSKITRIPYLQGTTLVLRRLFRGLRARHLKTSAKPFKQIGNC 180 Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPE-------------RISQVIGE 215 +I ++ Y + F F I ++ + + + R+ G Sbjct: 181 KTLIDHYSLDYRSIRFHFYLISLDKNGLVVKRELQQSHDTKFTKIKILSSIARLRNTHGH 240 Query: 216 DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQF-----YVFINGRTVQDKFILSTIRT 270 F L ++S +I + +P + + ++ NGR + + Sbjct: 241 TFFEELGILIDRSTKIDVILPRMLPHGGEEDLDNIKKPKKFLSFNGRPLSLELSFGKSIN 300 Query: 271 AYAETIPLGRY---PVVV-LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 +++ P+V L L DVNV P K+ + ++ + N + +++ I Sbjct: 301 ELIDSLYHQLQLFDPMVWYLNLRSVMNIGDVNVEPEKNDVLIKDVDRLLNNMRRALLGHI 360 Query: 327 NK 328 + Sbjct: 361 MQ 362 >gi|240268598|gb|ACS52173.1| Mlh1 [Giardia intestinalis] Length = 328 Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats. Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 15/202 (7%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS- 81 P KEL+EN+ DA++ + ++ + D G G+ + + R TSKI Sbjct: 1 PFNVAKELVENATDADAPTIRLFVSSNCYDLLMVCDTGHGIERTDYSLLCHRFATSKIET 60 Query: 82 -DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAIS------------GEKI 128 D +I +FGFRGEAL SI VS + ++S+ + I Sbjct: 61 FSDIYSIQSFGFRGEALSSISYVSRMIVVSKTKNQPAYVAVYIDGKLHFDPKTLTSEHTD 120 Query: 129 SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFST 188 + + + TI+ V DLF+ P R N ++S + +L +++ ++ A P ++ S Sbjct: 121 FFISTLKADSFTIICVTDLFYAEPIRRNQIRSSKTSLDL-QELLISISAANPTREYSISF 179 Query: 189 IKSNRYKMNFQSTNGNFPERIS 210 I + + + N + IS Sbjct: 180 IDNPQAIQREIQSWLNDTQHIS 201 >gi|328708648|ref|XP_003243755.1| PREDICTED: mismatch repair endonuclease PMS2-like [Acyrthosiphon pisum] Length = 591 Score = 148 bits (374), Expect = 3e-33, Method: Composition-based stats. Identities = 52/266 (19%), Positives = 105/266 (39%), Gaps = 7/266 (2%) Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 +K + S + + +T++ + L+N + + ++ + Sbjct: 318 TYCDFSKINTNASIEIDTSTAPKERKFALVETNIEQIKQRLSNLRFRRSEKQKIKTRFYA 377 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 + + E + Q + +II++ L IVDQHA E+ FE Sbjct: 378 TIDPIKNQQAEVELSREISKDMFSRMSIIGQFNLGFIITKLDADLFIVDQHATDEKYNFE 437 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA----ERFGPNAIAI 497 ++ N+TKITSQ L+ P+ ++L ++ME+ G + + + Sbjct: 438 TLQ---NTTKITSQKLVVPQQLELTAVNEIVLMENINVFQMNGFDFQFQQDAEPTKKVKL 494 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 IP + + + +++ + D+ T R+ ++ A+ AC S+ G+ + +M Sbjct: 495 TMIPMSNNWSFGKEDVDELLFMLQDAPNTLCRPSRVRSMFASRACRKSVMIGKVLNFGDM 554 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKL 583 +L+ M C HGRPT L Sbjct: 555 RKLIDHMGDIEQPWNCPHGRPTMRHL 580 Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 27/81 (33%) Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 + R + ++ + +YP V L + I +VD+NV Sbjct: 24 WTCYVQRKGKKNQSSYRMMSNRKQVIKTVNEVYHQYNQNQYPFVYLNITIARAEVDINVT 83 Query: 301 PAKSYIRFRNPTIIRNFIIQS 321 P K I N + + I S Sbjct: 84 PDKRQIFLSNENYLVSIIKAS 104 >gi|50548159|ref|XP_501549.1| YALI0C07260p [Yarrowia lipolytica] gi|49647416|emb|CAG81852.1| YALI0C07260p [Yarrowia lipolytica] Length = 524 Score = 147 bits (372), Expect = 4e-33, Method: Composition-based stats. Identities = 90/589 (15%), Positives = 208/589 (35%), Gaps = 77/589 (13%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA-GGGKSFFQITDNGF 61 IR++ ++ + I AG + R + I L+ NS+ + V + G + + DNG Sbjct: 2 IRRIPDESRDII-AGSMYNR-AEFICGLLNNSITRGARHVTISVLPQLGFT---VQDNGK 56 Query: 62 GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 MT RH + AL +G+V+ +T+ S ++ + Sbjct: 57 SMTD-------MRHTPA-----------------ALDLLGSVAVVTVES----HDQHLTL 88 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 I + + GT++ LF+ IP + + +Q + + + + + +P Sbjct: 89 QGHVRSIKIRDGPSSSEGTLITCSSLFYNIPVKRKYAL-QQRDYDQVIFGVWVELLRFPS 147 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 V + + SN+ K+ ++ + + VEL + + G+P Sbjct: 148 VH--VTLVSSNQVKLELVPSDSIVDRCMDMLEYYKCFGRRVELGRSQD---QELLFGLPE 202 Query: 242 FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 A + R K + + ++ + + Sbjct: 203 MAITGA------VGARGNGVKTVQILLYNGSPTSLKRVEKCLDRFNYVLLVDSYAQ---- 252 Query: 302 AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 + Q + + +S+ K S + P+ + + Sbjct: 253 --------------EGLSQELVVLELVEEWLSSNERGHKRSKSVESVSRPRKAVRMRSEG 298 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 + + +N + + T ++ + T + +Q+ + +++ Sbjct: 299 GDVADSVVNMDQNTIVSFSGGFECAGTSRGESSTTTNTTLTRFSEFKTISQLEKRFVLIL 358 Query: 422 TT---DGLVIVDQHAAHERLIFEKMRQD-FNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 L+ VDQHAA ER++ +K+ D + + L L+ H Sbjct: 359 AQLKSPTLICVDQHAADERILTDKITSDLIRDAENDVSQTAEIVPLHLSLNMKHLLK-HQ 417 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL---LRDIIDEIIDSSTTYTLQDRIE 534 L++ G + E G + +P + + + QL +++ ++ + + + + ++ Sbjct: 418 TVLNKWGFRFE--GG---YLNHVPHLAREMDPYQLDMGIKEYLETLENGGSDRAVPALLQ 472 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++A+ AC +I+ G ++ E + ++ + K QC HGRP+ + L Sbjct: 473 QLVASFACRNAIKFGDELTLEECHTMVENLLKTKLPFQCAHGRPSMVPL 521 >gi|299748044|ref|XP_002911247.1| hypothetical protein CC1G_14676 [Coprinopsis cinerea okayama7#130] gi|298407793|gb|EFI27753.1| hypothetical protein CC1G_14676 [Coprinopsis cinerea okayama7#130] Length = 296 Score = 147 bits (371), Expect = 5e-33, Method: Composition-based stats. Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 22/273 (8%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTS 65 LS ++ + +I+ + EL++NSLDA + +E + + F + D+G G+ Sbjct: 24 LSVPTQAKLRSTQILTSLPQIVSELLQNSLDAGAKSIEIGL-NAQEWFCWVKDDGCGINR 82 Query: 66 EEIPMAVQ-----RHCTSK--ISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 E + Q R+ TSK + TFGFRGEAL S + L ++SR + Sbjct: 83 EGLAAIAQEGDAGRYSTSKSYAPSAMNAQSTFGFRGEALASAAELCCLEIVSRTAVSREC 142 Query: 119 AQIAISGEKISSVRPVAM----NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRR 174 + + + G K P +PGT+V +RD F+ +P R S +L+ I Sbjct: 143 SSVILKGGKRLYEGPAVRWRREHPGTVVCIRDAFYNLPVRRLSHPSPSRTWDLVRQEIET 202 Query: 175 MAIAYPKVSFT---------FSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN 225 A+ P V+F+ + KS R + + ++ G + + E++ Sbjct: 203 YAVVSPDVTFSLEDIREDSNVTKTKSVRIARLIVCQTSSMLQSFRRIYGHALVEHVEEID 262 Query: 226 EKSNEITLQGYTGIP-TFNRGNANQFYVFINGR 257 S+ + ++G+ + T+++ + + Y R Sbjct: 263 ACSDALKIRGFISLCGTYSKISTDIQYGQATYR 295 >gi|328772216|gb|EGF82255.1| hypothetical protein BATDEDRAFT_87074 [Batrachochytrium dendrobatidis JAM81] Length = 101 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 37/100 (37%), Positives = 62/100 (62%), Gaps = 2/100 (2%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M ++ LS + ++++ +++ P +KELIEN++DA SS V+ + G + + DNG Sbjct: 1 MTLQVLSSETAKRLSSAQVVISPESVLKELIENAVDAGSSSVQIRVKDAGMTLISVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALP 98 G+ +I +A+QRH T+KI+ DD + TFGFRGE + Sbjct: 61 CGIPVSDILLALQRHTTNKITCFDDVLTVQTFGFRGEGIS 100 >gi|269316183|ref|XP_638891.4| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4] gi|256012918|gb|EAL65556.2| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4] Length = 1658 Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats. Identities = 90/459 (19%), Positives = 175/459 (38%), Gaps = 67/459 (14%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTS 65 L E++ ++ + +I AI+E+I NS+DA ++ + I SF ++ DNGFG++ Sbjct: 28 LKEEVSLKVRSSVVIVSLEQAIEEIIFNSIDARATVISISINLSNLSF-EVKDNGFGLSY 86 Query: 66 EEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN-------- 115 E + R+CTSKI+ D ++ TFG+RGE+L S+ +S L ++S + Sbjct: 87 ENLKFVGDRNCTSKINSLSDLKSLKTFGYRGESLASLSNISSLDIISNSFGSTIQKSISF 146 Query: 116 ----------------NTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLK 159 ++ I++ ++ GTIV++RDLF P R L Sbjct: 147 GKVDQFKILDNNNSSSCDNNNNNVNNNNINNNNNNSIANGTIVKIRDLFKNYPVRRQGLY 206 Query: 160 SEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFIN 219 ++ I I +A+++PK+ F+ ++ + + +F G++ +N Sbjct: 207 HPNLKLI-IKKRIEIIALSFPKIVFSVY-DETKSLTILKTPKDTSFLSYFKHFYGQEMMN 264 Query: 220 NAVE---------LNEKSNEITLQGYTGIPT-FNRGNANQFYVFINGRTVQDKFILSTIR 269 N S+ L GY P N + Y+++N R V + + + Sbjct: 265 KLEYVTSENYNNTTNNNSSSYYLSGYLSSPHKKGHPNKSFQYIYLNNRIVLNTKLHRHVN 324 Query: 270 TAYAETIPL-------------------GRYPVVVLLLEIDPRQVDVNVHP-AKSYIRFR 309 Y + P+ +L L + + + P +K+++ F Sbjct: 325 QLYQKYRLFNATRKANANVSKIAKKEVIDSNPIFILFLRCSQLEYERSYEPSSKTFLEFN 384 Query: 310 NPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKL 369 + I + K + K K I++ T LP + + + Sbjct: 385 DWKKPLAEIQNVLTKFLTKHRSDDGGNSRGKSITT--------TALPSSQPNNYDGKSTS 436 Query: 370 FLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI 408 + D+ +D S +E + + +G Sbjct: 437 TSTTTTTTAGDISIFEDDDLSNVVQDTQEDDGDGFDMGY 475 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 77/193 (39%), Gaps = 3/193 (1%) Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM-RQDFNSTK 451 E Q Q ++I + ++I+DQHA ER+ E + R+ F K Sbjct: 1453 QKCTEVIPKEMLQNFKFITQWDNKFLICEADGIVLILDQHAVSERIKLEILERKYFGENK 1512 Query: 452 ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ 511 + L E E L+ + + L + G K F +I I ++P Sbjct: 1513 FDLCPMPERTRWSLTEYELELMRIYTKPLEQWGFKWT-FNKTSINISQVPMFCLVGLGVN 1571 Query: 512 LLRDIIDEI-IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 LR+ + ++ T ILA+ AC +I+ G K+ +LL ++ + Sbjct: 1572 DLREFLYQLESSKGATSNRPPAAHRILASKACRTAIKFGNKLSREICIKLLEDLNECNIP 1631 Query: 571 SQCNHGRPTFIKL 583 QC HGRP+ I L Sbjct: 1632 FQCAHGRPSIIPL 1644 >gi|141797000|gb|AAI39775.1| Pms2 protein [Mus musculus] Length = 191 Score = 145 bits (365), Expect = 3e-32, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 9/181 (4%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q + +I+++ + L +VDQHAA E+ FE ++Q T + +Q L+TP+ ++L Sbjct: 5 MEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQH---TVLQAQRLITPQTLNLT 61 Query: 467 EGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 A+++E+ E + G A I +P + PQ + ++I + Sbjct: 62 AVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLI-SLPTSKNWTFGPQDIDELIFMLS 120 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 DS R+ + A+ AC S+ G + + EM +L+ M + + C HGRPT Sbjct: 121 DSPGVMCRPSRVRQMFASRACRKSVMIGTALNASEMKKLITHMGEMDHPWNCPHGRPTMR 180 Query: 582 K 582 Sbjct: 181 H 181 >gi|332864637|ref|XP_003318343.1| PREDICTED: mismatch repair endonuclease PMS2-like isoform 1 [Pan troglodytes] gi|332864639|ref|XP_003318344.1| PREDICTED: mismatch repair endonuclease PMS2-like isoform 2 [Pan troglodytes] Length = 191 Score = 143 bits (361), Expect = 8e-32, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 9/182 (4%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q + +II++ + + IVDQHA E+ FE ++Q T + Q L+ P+ ++L Sbjct: 5 MEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQH---TVLQGQRLIAPQTLNLT 61 Query: 467 EGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 A+++E+ E + G A I +P + PQ + ++I + Sbjct: 62 AVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLI-SLPTSKNWTFGPQDVDELIFMLS 120 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 DS R++ + A+ AC S+ G + + EM +L+ M + + C HGRPT Sbjct: 121 DSPGVMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMR 180 Query: 582 KL 583 + Sbjct: 181 HI 182 >gi|37051337|dbj|BAC81643.1| PMS2-C terminal -like [Homo sapiens] Length = 191 Score = 143 bits (360), Expect = 9e-32, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 9/182 (4%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q + +II++ + + IVDQHA E+ FE ++Q T + Q L+ P+ ++L Sbjct: 5 MEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQH---TVLQGQRLIAPQTLNLT 61 Query: 467 EGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEII 521 A+++E+ E + G A I +P S PQ + ++I + Sbjct: 62 AVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLI-SLPTSKSWTFGPQDVDELIFMLS 120 Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 DS R++ + A+ AC S+ G + + EM +L+ M + + C HGRPT Sbjct: 121 DSPGVMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMR 180 Query: 582 KL 583 + Sbjct: 181 HI 182 >gi|320163753|gb|EFW40652.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864] Length = 1219 Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats. Identities = 88/508 (17%), Positives = 166/508 (32%), Gaps = 129/508 (25%) Query: 14 IAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQ 73 + +G I + ++EL+ NS+DA ++ V+ + ++ DNG G+ ++ + Sbjct: 2 LRSGVSIPSLAACVEELVLNSIDAGATAVDVHVDL-QLCRLRVLDNGAGIALRDLARVGE 60 Query: 74 RHCTSK---------------ISDDFSNIHTF---GFRGEALPSIGAVSHL-TLMSRPPQ 114 RH TSK I DD + T GFRGEAL S+ +S L +++R Sbjct: 61 RHATSKFAAGSVSSAAGGVVAIEDDADLMQTLSYYGFRGEALASVADMSTLVEIVTRVDN 120 Query: 115 NNTG---------------------AQIAISGEKISSVRPV------AMNPGTIVEVRDL 147 +N G Q + EK V + GTIV V L Sbjct: 121 DNAGQSSETYFKLLRPTPSENRNPATQRSSEHEKPLPQYHVGVSAVKRVTAGTIVTVHGL 180 Query: 148 FFTIPARLNFL-KSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP 206 F T+P R + + + + +A+A P V+ + + R + + Sbjct: 181 FATMPVRQGVMLANPVLTLEHARRAVEAIALANPGVALSVHDDHNARRVLTTRRLTSALS 240 Query: 207 --------------ERISQVIGEDFIN-------------------------NAVELNEK 227 E + + +F N + + + Sbjct: 241 VFKLLFGVERVGVTENVDMSLSCEFSNLTTRSALNQPQAAVSETLAAAAPESSILVRSVT 300 Query: 228 SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET------------ 275 + +L+G+ G + + FIN R V + + Sbjct: 301 VVDYSLRGFLCTEP-QPGAKSMQFFFINRRRVLHTRFHKLVNQLMRQWQGTRGPRFVSQT 359 Query: 276 IPLGR--------------YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 +P+GR VL + P D+ PAK+ + F + + Q+ Sbjct: 360 LPVGRDMHASNNSRSFDKASCAWVLNMTCPPGLYDITFDPAKTLVEFADWETPLALVEQA 419 Query: 322 IQKAINKK--------GISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE 373 I+ A+ + +++ +SF + + + A + + + + E Sbjct: 420 IRTALQFHPSTVAVATDLLAATLSEPPTFASFQPGGLVSSEVVRRARARESANSAVEVDE 479 Query: 374 -------NRLSTNDLLPSDDPTYSEDND 394 RL+T D + + S Sbjct: 480 CDAVPKRPRLATEDSAADESQSRSRYFQ 507 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 64/386 (16%), Positives = 122/386 (31%), Gaps = 96/386 (24%) Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF------ 345 P ++ + +P + + + + I ++ N + + SS Sbjct: 782 PDVLEPDANP--TSPKQQESDEVMFTISSKLRSHNNLERPADDPTAHDDEFSSAEADDAL 839 Query: 346 ---------HQDNAPKTHLPKYATSLTNTQEKLFLQEN------RLSTNDLLPSDDPTYS 390 + + + P + + + Q +F R ++N+ L + S Sbjct: 840 LAATALPNSNPVPSVASSGPSFRSLMARWQNPVFPSRQARPMDARAASNEALRTQRKDAS 899 Query: 391 EDNDPVEESEATHYQLGIACAQI---------HQNYIISQTTDGLVIVDQHAAHERLIFE 441 +E L Q + + D + VDQHAAHER+ E Sbjct: 900 RSMHFRKELFGQLSVLSQVERQFVVVLAPGDDQPSALSDDGNDLIFCVDQHAAHERIRLE 959 Query: 442 KM---------RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA----- 487 + + +S + S+TL P + + E L+ ++L GI+ Sbjct: 960 RFTREVYQSNDQGTGSSQVLKSETLKDPLRLAMTVAEARLLEPFRDNLEACGIRFRIGSN 1019 Query: 488 ----ERFGPNAIAIREIPAIL----------------------------SKKNIPQ---- 511 E A+ I +P I+ ++ Q Sbjct: 1020 VNALEDNAECAVMIDAVPPIMLEASRAEYISGQHVSRFQLEKQARALVGGADDVAQTVSS 1079 Query: 512 -----LLRDIIDEIIDS---------STTYTLQDRIENILATMACYGSIRSGRKMQSIEM 557 +L +I ++ S Y L I + LA+ AC+G+I+ G + + Sbjct: 1080 LTQAAILHGLISTLVRSRIDQQCHTGGGAYDLPLTISSALASKACHGAIKFGDTLSIDQC 1139 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKL 583 L+ + QC HGRP+ L Sbjct: 1140 KSLVNTLSDCTLPFQCAHGRPSIAPL 1165 >gi|209878770|ref|XP_002140826.1| DNA mismatch repair protein [Cryptosporidium muris RN66] gi|209556432|gb|EEA06477.1| DNA mismatch repair protein, putative [Cryptosporidium muris RN66] Length = 919 Score = 140 bits (354), Expect = 5e-31, Method: Composition-based stats. Identities = 82/384 (21%), Positives = 139/384 (36%), Gaps = 75/384 (19%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 KL + ++++ ++I IKELIENSLDAESS + + G S+ ++ DNG G+ Sbjct: 3 HKLKKDDQEKLSSQQVITELKDCIKELIENSLDAESSNIIINLGDNGSSYIEVIDNGSGI 62 Query: 64 TSEEIPMAVQRHCTSKIS--DDF-SNIHTFGFRGEALPS-IGAVSHLTLMSRPPQNNTGA 119 ++ R TSK+ + +++T GFRGE L S I + + + + ++ Sbjct: 63 --IDLDKIGGRGNTSKLENFESLNESLNTLGFRGEGLNSIINSCKSVVIETCIKEDKGIT 120 Query: 120 QIAI--------SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVETNLITD 170 + + I++ + GT V V F+ AR + +++ + Sbjct: 121 RSIYFDKANISENRNTINNHSWIIGESGTKVLVTGFFYLYIARRKLFLQQNKLQLKNLIT 180 Query: 171 VIRRMAIAYPKVSFTFST--------------IKSNRYKMNFQSTNGNFPERISQVIGED 216 +I AI YPKV F + N K + N + +I Sbjct: 181 LIEEYAICYPKVRFLLTNTMLTNEQRTKMGLVNDYNYSKYIEGNLANNKNNSTATLIMTS 240 Query: 217 FINNAVELNEKSN-----------EITLQGYTGIPTF----------------------- 242 + EL EI + G IP + Sbjct: 241 GSHTTTELKVAKYLWGDSLLEDAIEIDIHGELSIPKYRYNKNVDNYNNSPDIIGGNWSIT 300 Query: 243 --------NRGNANQFYVFINGRTV----QDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 R +++ +N R V +++I + I YPV VL + + Sbjct: 301 GFISSIDKGRPSSDYQIYIVNNRPVSTLRTFSRAITSIHRTLSSYINKKWYPVFVLKISL 360 Query: 291 DPRQVDVNVHPAKSYIRFRNPTII 314 +D+NV P K I N I Sbjct: 361 PSCLLDINVTPDKRIILLPNNVEI 384 Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL-KLS 586 R+ +ILA+ AC ++ G + +M++++ M + C HGRP+ L L+ Sbjct: 858 PRPQRLWSILASKACRRAVMVGDDLNLTQMSKIIYNMSTLKSPWNCPHGRPSIRHLGNLT 917 Query: 587 DI 588 DI Sbjct: 918 DI 919 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 81/230 (35%), Gaps = 18/230 (7%) Query: 306 IRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNT 365 I + I + N + ++ K + H + + S + Sbjct: 563 IYLNDEKSADENITKHTSYTPNINLKNCINISEKNFL-DEHNNECVELSPEVIDYSESQI 621 Query: 366 QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD- 424 Q ++ N+ + S + + ++ + + + + Q ++ +I++ Sbjct: 622 QNMNYITNNKTHKGN---SCNKSINKTLNKCFQFQKHLFNDLKIVGQFNKGFILATLFQP 678 Query: 425 -----GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 L I+DQHAA E+ FEK D I +Q LL+P + L + + + + Sbjct: 679 EVSSFHLFIIDQHAADEKTKFEKYNNDL--RNIQTQKLLSPLPMTLTPAQEQTALTYKDI 736 Query: 480 LHRLGIKAERFGPNA-----IAIREIPAILSKKNIPQLLRDIIDEIIDSS 524 G K F N+ I + +IP I+ D++ +I Sbjct: 737 FESNGFKY-VFNTNSTIGKRIQLTQIPIIMGSPLQQFDFLDLLTQITKYK 785 >gi|313212747|emb|CBY36677.1| unnamed protein product [Oikopleura dioica] Length = 664 Score = 140 bits (352), Expect = 8e-31, Method: Composition-based stats. Identities = 47/228 (20%), Positives = 90/228 (39%), Gaps = 9/228 (3%) Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 S+ +EK + + +++ + + Q ++ +II Sbjct: 432 ESIKAAKEKEERSNTIFQGREFYAKFNDQKKAEDELTRKFSKKDFTKLQVIGQFNRGFII 491 Query: 420 S---QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEH 476 Q D L ++DQHA E+ FE++ S KI SQ L+ + + L GE ++ + Sbjct: 492 VTVGQLKDDLFLIDQHACDEKFNFERLM----SKKIDSQPLVIGKRMTLNPGEDQILQDK 547 Query: 477 DEDLHRLGIKAERFGPN-AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 + G P + + +P + + + +++ +I+ +I Sbjct: 548 VALFKKYGFDFNFSDPEFSYRMTAVPRVGKSTLGEEDVHEMLF-LINEGDFNPKPSKIRR 606 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 I A AC S+ G +++ +M R+L+ M C HGRPT L Sbjct: 607 INAMAACRSSVMIGEALKTYQMERMLKNMSTMDQPWNCPHGRPTMRHL 654 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 49/290 (16%), Positives = 98/290 (33%), Gaps = 34/290 (11%) Query: 131 VRPVAMNPGTIVEVRDLFFTIPARLNFLK-SEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 + + GT + V +LF IP R K + + E + A+ + Sbjct: 1 MIKAQSSNGTTIRVENLFHRIPVRRTVFKQNAKREAQRALATMMSYALIANARIVVTTKN 60 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE-------------------------- 223 + + +I+ V+G VE Sbjct: 61 GRSMKTEIQTRAGDSLKGKIASVLGGQISKGLVEIDDIFDAGATEVESFWNLSVPTEEVI 120 Query: 224 --LNEKSNEITLQGYTGIPTFN-RGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 +K+ G+ R + ++ + F+NGR + F+ I + + + Sbjct: 121 EDHLQKARIFKFNGFISKTDSGGRTSPDRQFFFVNGRPIDAPFLSRIINQEWRKVTS-KK 179 Query: 281 YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNP---TIIRNFIIQSIQKAINKKGISTSSVL 337 YPVVVL +E+D VD+N+ P K + +N ++Q+I A + +S + + Sbjct: 180 YPVVVLNIEVDQSAVDINLAPDKRTVLLQNQKHCQFRFRILLQNIWGATERDVVSMTQLS 239 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 + + + ++ + L N ++E+ LP D Sbjct: 240 MDQFSMTLNTQSSVENSTESSVNGLINDVTFSEVEEDSNERPSKLPRLDF 289 >gi|296812399|ref|XP_002846537.1| DNA mismatch repair protein pms1 [Arthroderma otae CBS 113480] gi|238841793|gb|EEQ31455.1| DNA mismatch repair protein pms1 [Arthroderma otae CBS 113480] Length = 1013 Score = 140 bits (352), Expect = 9e-31, Method: Composition-based stats. Identities = 80/397 (20%), Positives = 136/397 (34%), Gaps = 64/397 (16%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I+ + + ++QI +G++I + Sbjct: 3 TIKPIEARSVHQIQSGQVIVDLCRPV------------------------WLMW------ 32 Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 +H TSK+S D + + TFGFRGEAL S+ AVS+L +++ + A Sbjct: 33 --------FIALKHYTSKLSTFADLTELQTFGFRGEALSSLCAVSNLKVITAEAEQAPRA 84 Query: 120 Q--IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 K+ S + VA GT V V +LF ++P R K+ + E + ++ A Sbjct: 85 SKLDFEFSGKLKSTQVVAGQKGTTVSVENLFKSLPVRRRELEKNVKREYGKVLALLHAYA 144 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVE----------- 223 V F + +T N E IS V G + + Sbjct: 145 CISTGVRFNVKNQMPKGKSVVVFTTKSNPTTRENISNVYGAKTLLALMPLDLDLEFEPSP 204 Query: 224 -----LNEKSNEITLQGYTGIPTF--NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 ++ SN+I + G+ P F R ++ F+N R I Y Sbjct: 205 AAKRFSSKASNKIFVHGHISKPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNEVYKSF- 263 Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSV 336 L + P + E+D DVNV P K I + + + S+ + ++ + Sbjct: 264 NLSQSPFIFANFEMDTAAYDVNVSPDKRTIMLHDAGALIECLKASLTELFEQEDQTVPVS 323 Query: 337 LSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQE 373 S + KT P + N +E + Sbjct: 324 QLAFSKKSEIRPPRQKTPPPSTDATQDNPEEPTGIAP 360 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 79/208 (37%), Gaps = 48/208 (23%) Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 S D L I+DQHA+ E+ FE+++ T + +Q L+ P+ +DL E +I+E+ Sbjct: 769 PSAEQDELFIIDQHASDEKYNFERLQ---AETTVQNQRLVQPKTLDLTAVEEEVIIENLA 825 Query: 479 DLHRLGIKAE-------RFGPNAIAIREIP----AILSKKNIPQLLRDIIDEIIDSSTTY 527 L + G E G I +P + + +++ +L+ ++ E S + Sbjct: 826 ALEKNGFIVEIDTSGDEPIGRRCKLI-SLPLSKEVVFNTRDLEELIV-LLSEAPQQSQNH 883 Query: 528 --------------------------------TLQDRIENILATMACYGSIRSGRKMQSI 555 ++ + A AC SI G+ + Sbjct: 884 HGKRSMNEFNSDAEGADIEPPGISSPFSDHLVPRPSKVRKMFAMRACRSSIMIGKNLTHR 943 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKL 583 +M +++ M C HGRPT L Sbjct: 944 QMESVVKHMGTIDKPWNCPHGRPTMRHL 971 >gi|169836746|ref|ZP_02869934.1| DNA mismatch repair protein mutL [candidate division TM7 single-cell isolate TM7a] Length = 124 Score = 139 bits (349), Expect = 2e-30, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 4/123 (3%) Query: 472 LIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQD 531 E+ + G + F N I IR +PA + +I + + ++D ++D Sbjct: 4 YYFENIDLFQNFGFDIDEFAENEIVIRAVPAFDFRDSIENVF---LQLLLDLKNEVEIKD 60 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 ENI+ +M+C G+I++G+K+ EM ++R + + C HGRP +KL +D++K+ Sbjct: 61 LRENIIISMSCKGAIKAGQKLDISEMQNMVRRIHEVGK-YTCPHGRPIIVKLSKNDLDKM 119 Query: 592 FGR 594 FGR Sbjct: 120 FGR 122 >gi|164660750|ref|XP_001731498.1| hypothetical protein MGL_1681 [Malassezia globosa CBS 7966] gi|159105398|gb|EDP44284.1| hypothetical protein MGL_1681 [Malassezia globosa CBS 7966] Length = 587 Score = 138 bits (347), Expect = 3e-30, Method: Composition-based stats. Identities = 87/429 (20%), Positives = 163/429 (37%), Gaps = 27/429 (6%) Query: 88 HTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKIS-SVRPVAMNPGTIVEVR 145 TFGFRGEAL SI VS + ++S+ + + +S R A GT + + Sbjct: 2 TTFGFRGEALASISYVSASVHVVSKRADDICAYRADFCAGTLSSEPRACAGTNGTSITAQ 61 Query: 146 DLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP--KVSFTFSTIKSNRYKMNFQS-TN 202 DLFF R L+S E N DV+ + A+ Y VSF+ + + + Sbjct: 62 DLFFNTSQRKRALRSASEEYNRSLDVVTKYALHYGPLGVSFSCKRAEHASMDLQTLADAR 121 Query: 203 GNFPERISQVIGEDFINNAVE---LNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTV 259 P+ I + G + + ++ +G+ ++ FIN R V Sbjct: 122 TTIPDMIRTIYGSHLARDLLHLSTFSDAKLGFKAEGWFSNANWSSRRITFI-CFINHRLV 180 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 + + + + YA+ + G+YP + + LEI+P ++DVNVHP K + F + I I Sbjct: 181 ECPSLKRALESVYAQVLLKGQYPWIYVALEIEPNRIDVNVHPTKQEVHFLDEEDIIELIT 240 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNA-----PKTHLPKYATSLTNTQEKLF---- 370 +Q + + + +N + H P++ + N+ ++L Sbjct: 241 ARVQDILADQSSCRVYSTRNVPLGQVVSENQVQVLRSRGHDPRHLVRVDNSDQRLDGMVQ 300 Query: 371 --LQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 +R ++D + ++ + + +E A+H+ Q H I GL + Sbjct: 301 IPSTISRTPSSDKILQNECKLTSVRELRQECLASHHVRLTNILQNHSFVGIVDLQKGLSL 360 Query: 429 VDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE 488 + H L+ + + ++ + + + L +L LG E Sbjct: 361 IQ-HNTQLYLVQHGLLIEDFGYQLALRQFGSLATVRLDPAPS------LSELIGLGYDRE 413 Query: 489 RFGPNAIAI 497 A+ Sbjct: 414 PADQQKAAL 422 >gi|258578039|ref|XP_002543201.1| predicted protein [Uncinocarpus reesii 1704] gi|237903467|gb|EEP77868.1| predicted protein [Uncinocarpus reesii 1704] Length = 681 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 64/352 (18%), Positives = 119/352 (33%), Gaps = 65/352 (18%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I L E I + + P +KEL++N+LDA ++ V ++ Q+ DNG Sbjct: 1 MPIAALDEAAAKAIGSASALYDPCCVVKELVDNALDANATIVSIELSSNTLDTIQVKDNG 60 Query: 61 FGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+ E+ + +R+ TSKI +D N+ + GFRG+AL S + + L S Sbjct: 61 LGIPLEDRDLVCKRNHTSKIRSLEDLKNVGGSSLGFRGQALASTAEM-QVMLKSSTQN-- 117 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 + I ++ A Sbjct: 118 ------------------------------------------------ISRIRRTLQEYA 129 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEKSNEITLQ 234 ++ V F+ +K + + N + IS++IG D + + Sbjct: 130 LSRVHVRFSLKILKHQQDSAWVYAPKQNPSVTDAISKIIGVDVMAQCLSQTTDLVN---- 185 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR--YPVVVLLLEIDP 292 IP + + + + I + E +P P + L + Sbjct: 186 --NSIPNRENESHSGIRLHAILPKLDAVKIYKSYIKYTFERLPSSTVANPFLCLYIFCAE 243 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 DVN+ P+K + F N ++ + + K + + +M +S Sbjct: 244 GSYDVNIEPSKDDVLFENQALVSEAVEGLFEGIYGKLQSRGENQVHSQMGAS 295 >gi|322694251|gb|EFY86086.1| putative DNA mismatch repair protein PMS1 [Metarhizium acridum CQMa 102] Length = 791 Score = 137 bits (346), Expect = 4e-30, Method: Composition-based stats. Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%) Query: 424 DGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 D L I+DQHA+ E+ FE+++ +T I SQ L+ P+ + L E +++E+ L Sbjct: 595 DELFIIDQHASDEKFNFERLQ---ANTVIQSQRLVYPKSLQLTALEEEIVLENLPALEAN 651 Query: 484 GIKA--ERFGPNAI----AIREIPAILSKKNIPQLLRDIIDEIIDSSTTY---TLQDRIE 534 G K + G + + + +P L ++I + + S+ R+ Sbjct: 652 GFKIQVDSTGGSPVGARCQLLALPLSREVTFTLNDLEELIALLAEESSGSRHIPRPSRVR 711 Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + A AC SI G+ + + +M LLR M + C HGRPT L Sbjct: 712 KMFAMRACRSSIMIGKPLTANQMYLLLRHMGELDKPWNCPHGRPTMRHL 760 Score = 42.3 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 73/208 (35%), Gaps = 5/208 (2%) Query: 222 VELNEKSNEITLQGYTGIPT--FNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG 279 + + +S ++ + G+ P R ++ F+NGR T Y + Sbjct: 26 LRTDRESKQVRVLGHVSRPVQGDGRQAPDRQMFFVNGRPCGLPQFAKTFNEVYKAY-NIS 84 Query: 280 RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKG--ISTSSVL 337 + P + +++D DVNV P K I + +++ + + S+ + + + T+ VL Sbjct: 85 QSPFIFANVQLDTNMYDVNVSPDKRSILLHDQSLLLDRLRSSLVRLFDSHDYQLPTTQVL 144 Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 + + +A + + + + E + ++ P + ++ + Sbjct: 145 TTETPGCPASVDANRRSISLIRENSPHASESELSAASHSESDGESPFNTGFVKGNSSKMT 204 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDG 425 E G A+I + Sbjct: 205 RQEDKIASGGREGARIAPESLTKWFGCD 232 >gi|300122429|emb|CBK23000.2| unnamed protein product [Blastocystis hominis] Length = 185 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 8/182 (4%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q + ++I+ Q L I+DQHA E+ +E + N I SQ L+ P ++L Sbjct: 1 MEVIGQFNNSFILCQLDKDLYILDQHACDEKSNYEHLM---NEVAIHSQKLIKPIPLELS 57 Query: 467 EGECALIMEHDEDLHRLGIKAERFG----PNAIAIREIPAILSKKNIPQLLRDIIDEIID 522 + I+ + R G + + +PA + +++ +++ Sbjct: 58 PDQEFTIIHNQAIFKRNGFDISISESQELGQRLQLTSLPASKKYTFSVEDFLELVGTVME 117 Query: 523 SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEM-NRLLREMEKNPNSSQCNHGRPTFI 581 + ++ ILAT AC+ S+R+G + +M ++++R + + C HGRPT Sbjct: 118 TGGMAQRTPKLAKILATRACHQSVRAGDPLNYPKMVSQIVRRLAELDRPWSCPHGRPTLR 177 Query: 582 KL 583 L Sbjct: 178 HL 179 >gi|309807408|ref|ZP_07701371.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LactinV 01V1-a] gi|308169330|gb|EFO71385.1| DNA mismatch repair protein, C-terminal domain protein [Lactobacillus iners LactinV 01V1-a] Length = 388 Score = 137 bits (345), Expect = 5e-30, Method: Composition-based stats. Identities = 88/385 (22%), Positives = 156/385 (40%), Gaps = 46/385 (11%) Query: 247 ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYI 306 AN + +N R V++ ++ I Y + GRYP ++ +++DP VDVNVHP K + Sbjct: 9 ANFITLLLNTRYVKNYRLVQAIVDGYGTRLLKGRYPFAIVKIDLDPLLVDVNVHPTKQEV 68 Query: 307 RFRNPTIIRNFIIQSIQKAIN--KKGISTSSVLSKKMISSFHQ----------DNAPKTH 354 R + + I+++I +A+ + I++ ++ + Q D + Sbjct: 69 RLSKESELARLIVRTIDQALGATEHEIASFDDATESKQTKLDQLEFNLNEAVVDTSRIPV 128 Query: 355 LPKYATSLTNTQEKL------------------------FLQENRLSTNDLLPSDDPTYS 390 LT+ K+ + + T S S Sbjct: 129 EFSIPNDLTDDSSKVKEDDTTFVSLKHPRQDEHYLVTTTWDANVQAQTALSPFSASSLSS 188 Query: 391 EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST 450 E E+ Q+H+ Y+++ + L IVDQ AA RL F+K+ + Sbjct: 189 EVTTSSEQILVNKLPQLQCLGQMHE-YLLATADNDLYIVDQVAADNRLAFDKLLLQMQAE 247 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 QTLL I+D + + + D +LG+ E FG + ++E P L + Sbjct: 248 NNYEQTLLDNIILDFSMIDFLKVQDKLADFKKLGLNLEEFGGRSFVLQEYPLWLENCDQI 307 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIE---NILATMACYGSIRSGRKMQSIEMNRLLREMEKN 567 Q ++ +ID I+ + RIE I+AT + IR + + S+EM +L + + Sbjct: 308 Q-IKAVIDLILAHINAPLDKIRIELAKKIVATK--H--IRR-KSLNSLEMVEMLTSLSNS 361 Query: 568 PNSSQCNHGRPTFIKLKLSDIEKLF 592 N G+ K+ +D+ KLF Sbjct: 362 SNPYHDPFGKIIIAKISENDLRKLF 386 >gi|312087899|ref|XP_003145652.1| hypothetical protein LOAG_10077 [Loa loa] gi|307759184|gb|EFO18418.1| hypothetical protein LOAG_10077 [Loa loa] Length = 691 Score = 137 bits (344), Expect = 7e-30, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 108/306 (35%), Gaps = 54/306 (17%) Query: 50 GKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLT 107 G ++ D+G G+ S + H TSK++ DF+ + TFGFRGEAL S+ A+S L+ Sbjct: 2 GFERVEVIDDGTGIHSLNFDALCKPHSTSKLTNFSDFNQLTTFGFRGEALSSLCAISSLS 61 Query: 108 LMSRPPQNNTGAQIAI-SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL-KSEQVET 165 + +R ++ I S A GT + + LF T+P R ++ + Sbjct: 62 ITTRHADEVMATKLQFGHDGSIKSREKCARPVGTTISINCLFETLPVRRKEFERTIKKAF 121 Query: 166 NLITDVIRRMAIAYPKVSF--TFSTIKSNRYKMNFQSTNGNFPERISQVIGEDF------ 217 + +V++ A++ V F + N + + + + G F Sbjct: 122 TKLLNVVQSFALSRTNVRFVVNSLMDGKQHQALVTPGGNASIKDIVVNLFGARFEKGTVL 181 Query: 218 ------------INNAVELNEKSNEITLQGYTGIPTFNR--GNANQFYVFINGRTVQDKF 263 + + K ++I + GY + A++ +V+ N R V Sbjct: 182 DIIQQEPDESICALYGISDHSKFDDIKITGYISSCVHGQGKSTADRQFVYFNKRPVDYAK 241 Query: 264 ILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQ 323 + +DVNV P K + F + + S+ Sbjct: 242 V----------------------------ESIDVNVSPDKRSVFFEREKELFALLRASLL 273 Query: 324 KAINKK 329 Sbjct: 274 ATFAPH 279 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 67/158 (42%), Gaps = 9/158 (5%) Query: 434 AHERLIFEKMRQDFNSTKITSQT---LLTPEIIDLLEGECALIMEHDEDLHRLGIKA--- 487 ER++ + ++ ++ ++P ++DL + A++ ++ + + G + Sbjct: 526 DDERIMESRTEFRVDNPEVAESELAAYISPRVLDLGVVKEAILRDNVDIFNYNGFEFQFD 585 Query: 488 --ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 E G A+ + IP + S + + +++ + D ++ + A+ AC S Sbjct: 586 DEEVVGKRAL-LTAIPVLQSWQFSISDIDEMLSVLCDFPGMMYRPAKLRKLFASRACRKS 644 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + G + M +++R + + C HGRPT L Sbjct: 645 VMIGSSLTMAHMEKIVRHLGTLDHPWNCPHGRPTLRHL 682 >gi|298715813|emb|CBJ28278.1| MutL protein homolog 3 [Ectocarpus siliculosus] Length = 1581 Score = 137 bits (344), Expect = 7e-30, Method: Composition-based stats. Identities = 71/363 (19%), Positives = 124/363 (34%), Gaps = 48/363 (13%) Query: 31 IENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP--MAVQRHCTSKISD--DFSN 86 + NS+DA ++ VE + + DNG G+ +E + A +R +SK + + + Sbjct: 44 VSNSIDAGATSVEVKVDLPSY-RITVVDNGRGIPAETLRSLTATER-ASSKANSAVEMQH 101 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQ-NNTGAQIAISGEKISSVRPVAMNPGTIVEVR 145 T+GFRGEAL S+ S L + SR + + GTIV +R Sbjct: 102 ASTYGFRGEALYSLALTSLLEIQSRCAGKEPHAKVVREGEVLHFGPSRAPVRAGTIVTLR 161 Query: 146 DLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNF 205 D FF P R +E E I D + RMA+ V+ T ++ + +T Sbjct: 162 DAFFKWPVRRKAA-NEVTEMTRIKDCVSRMALVNNSVAITVRDSAKSKVVVRATATGSAT 220 Query: 206 PERIS---------------QVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQF 250 V + + I G + + Sbjct: 221 RTFAQVFSSDKLSLARKVQIPVCVTSSAVHPLWRIHLPFCICSIGSSSGMVAFPFSTRYD 280 Query: 251 YVFINGRTVQDKFILSTIRTAYAETIPLGR-------------------------YPVVV 285 + + A + GR +PV V Sbjct: 281 TSQLRCVPFMVLLLAVNAAFAPCMALLAGRGGADGQGVVRRVRNPNASSGQRQELFPVFV 340 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF 345 L LE +VD+ P K+++ F + RN I + +++ + S + + + +F Sbjct: 341 LNLECPRSEVDIMSDPEKTWVEFSDWAAARNACISMLLAFLSRFSHAVPSSVLRDLRRAF 400 Query: 346 HQD 348 H++ Sbjct: 401 HKN 403 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 70/210 (33%), Gaps = 19/210 (9%) Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 K A + L + R L D + + Q Sbjct: 1350 EAEKAAPEKDSRYNPLPGRRERQIPQVLQAGQDEVGAGAGAVAVTVTPEELSEALLIGQA 1409 Query: 414 HQNYIISQTTDG-LVIVDQHAAHERLIFEKMRQDFNSTK-----ITSQTLLTPEIIDLLE 467 + +I+ + G ++ +DQHAA ER+ E++ + + L PE + + Sbjct: 1410 GRKFILLRAKTGAVLCLDQHAADERVKLEELERQVFGEGRERRNVERLLLDPPEKLSITR 1469 Query: 468 GECALIMEHDEDLHRLGIKAE----RFGPN----AIAIREIPAILSKKNIPQLLRDIIDE 519 + L+ EH E L + + G + + + +P + + Q + Sbjct: 1470 SDAELLEEHREVLSSWQFEVRVDQAQQGGDGLTPVVTLTAVPMVCGVRLSVQDFVGFLHF 1529 Query: 520 IIDS-----STTYTLQDRIENILATMACYG 544 + +S S ++++IL AC+ Sbjct: 1530 LRESVEPGQSARRLRPPQVQHILNYKACHS 1559 >gi|316969662|gb|EFV53722.1| mismatch repair endonuclease PMS2 [Trichinella spiralis] Length = 765 Score = 136 bits (343), Expect = 8e-30, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 13/185 (7%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q + +I+++ D L I+DQHA+ E+ FE MR+ ST + SQ L+ P +L Sbjct: 580 MHVIGQFNCGFILTRLDDDLFILDQHASDEKRTFETMRR---STVVQSQLLVHPICSNLT 636 Query: 467 EGECALIMEHDEDLHRLG--IKAERFGPNA-IAIREIPAILSKKNIPQLLRDIIDEIIDS 523 + +I+E+ E LG + G + + I +P + + D D I+ S Sbjct: 637 PFDRHVILENLETFKNLGYTFQFPPEGSDEPVKIVSLPVCHGQIFDQRG--DTTDNILTS 694 Query: 524 STT-----YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 +++ + +I +ILA+ AC S+ G + EM +++ + + C HGRP Sbjct: 695 NSSFRVGNLCMPTKIRSILASRACRKSVMIGTALSMEEMQQIVERLSSIEHPWNCPHGRP 754 Query: 579 TFIKL 583 T L Sbjct: 755 TVRHL 759 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 116/297 (39%), Gaps = 29/297 (9%) Query: 82 DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISG-----EKISSVRPVAM 136 DD S + TFGFRGEAL ++ + + + +R + Q+ ++++ R V Sbjct: 2 DDLSRMKTFGFRGEALCALCLIGDVIITTRHADSELAYQLHFDRSGQLTKQVACSRQVRQ 61 Query: 137 NPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 GT VEV ++F P R ++S Q E + +++ A+ + + + Sbjct: 62 IIGTTVEVAEIFHPFPVRRKSLIRSVQKEWPKLMHMLQSYALLPSALRLQVVNKQKGGKQ 121 Query: 196 MNFQSTNG--NFPERISQVIGEDFINNAVELNE-------------------KSNEITLQ 234 S N E I V + +E + + ++I + Sbjct: 122 SVAFSALSSENLRENICSVFDVGQLRLLMEFVQTVPNEETLEQYLVKNFDPAEIDKIKIV 181 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP-R 293 G+ R + ++ + ++N R + + I + Y + P+ +YPV VL + + Sbjct: 182 GFVSSVQQGRSSGDRQFTYVNNRPCEIRKITQLVNEVYHQFNPV-QYPVFVLYINVPTAE 240 Query: 294 QVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 +DVN P K + ++ + S+ + + + S K + + ++A Sbjct: 241 MLDVNCTPDKRLVYISRENLLLAILRHSLTEMYGQSSVIMSCSSRWKTLDTPQIEDA 297 >gi|296414414|ref|XP_002836896.1| hypothetical protein [Tuber melanosporum Mel28] gi|295632738|emb|CAZ81087.1| unnamed protein product [Tuber melanosporum] Length = 906 Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats. Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 10/158 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L E + +I + I S I EL++N++DA + V + G++ + D+G Sbjct: 7 PIRLLPESVSARIRSTLTITNISDVISELLQNAIDAGARNVAIAV-NLGRNSCVLEDDGH 65 Query: 62 GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 G+T E + + + H TSK FGFRG+AL +I S T+ SR + Sbjct: 66 GVTPEGMLLVGREHATSKYPPAGD----FGFRGQALSAICRHSLTTITSRADASGRTVMR 121 Query: 122 AISGEKISSVRPVA-----MNPGTIVEVRDLFFTIPAR 154 +S + GT+V V L+ +P R Sbjct: 122 RVSYGRELFTGAAPEHLELRRSGTVVRVEGLWGDMPVR 159 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 72/198 (36%), Gaps = 40/198 (20%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNS-----TKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 LV+VDQHAA ER+ E + + S ++ + E L H Sbjct: 660 LVMVDQHAADERVRVEALFAELCSLEESPQGDQTRAQSGNLTYKISHREAELFTRHRASF 719 Query: 481 HRL----------GIKAERFGPNAIAIREIPAILSKKNI--PQLLRDII----------- 517 G + E N + I +P ++S + P L+ DI+ Sbjct: 720 SEWKIHYTIATNGGKEKEGAKENTLTITSLPRMVSDRCASEPSLMIDILRRHIPVLEDTT 779 Query: 518 --DEIIDSSTTYTL----------QDRIENILATMACYGSIRSGRKMQSIEMNRLLREME 565 + +ST +L + +++ + AC +I ++ E L+ ++ Sbjct: 780 AMAHVGSASTASSLDPHAPLLSRCPTALVDMINSRACRSAIMFNDPLELDECRLLIGKLA 839 Query: 566 KNPNSSQCNHGRPTFIKL 583 + QC HGRP+ I L Sbjct: 840 ECKFPFQCAHGRPSMIPL 857 >gi|328870673|gb|EGG19046.1| MutL DNA mismatch repair protein [Dictyostelium fasciculatum] Length = 1219 Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats. Identities = 70/329 (21%), Positives = 124/329 (37%), Gaps = 59/329 (17%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I KL + ++ +I + I AI+EL+ NS+DA ++ + + F++ D+G+G Sbjct: 12 IHKLDDDVVVKIRSSVTIMAVDQAIEELVFNSIDAGATNILV-VYNASTLSFEVHDDGYG 70 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMS---------- 110 +T E + QR+CTSK DD + I T G+RGE+L SI ++ L + S Sbjct: 71 ITLEGLQEIGQRYCTSKCHTLDDLNYISTIGYRGESLASIAEIATLDIQSTTLCSQQQQQ 130 Query: 111 ---------------------------RPPQNNTGAQIAISGEKISSVRPVAMNP----- 138 + + A I K+ ++ V Sbjct: 131 QQQQQQQQQQQQQQQEQQEQQEQEQEQKDAAARSTASKLIQFGKLEYIKNVVTPGSGVPL 190 Query: 139 ----GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 GTIV+VRD+F +P R + + + I A+++ ++ T N+ Sbjct: 191 VKSLGTIVKVRDIFKNVPVRRQQI-NPATLRLAVKKRIECCALSHARIKITLYETSKNQ- 248 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEK-------SNEITLQGYTGIPT-FNRGN 246 K+ + NF S G ++ GY +P N Sbjct: 249 KLVSLPPDQNFFSLFSLYYGLPKAQTLEFISSSADVIKGLPIGYKFTGYLTLPNEHGIPN 308 Query: 247 ANQFYVFINGRTVQDKFILSTIRTAYAET 275 + V++N R + + I + Y + Sbjct: 309 RSLQLVYLNRRLITNTKIHRLVNELYKKY 337 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 73/225 (32%), Gaps = 18/225 (8%) Query: 373 ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQ--LGIACAQIHQNYIISQTTDGLVIVD 430 E R+ + E + Q + +++ ++ L +D Sbjct: 969 EKRIEIPTIPMDISRNIMTMMKASAEKPISRTMLEQARFITQWQKKFLLCESQGVLFALD 1028 Query: 431 QHAAHERLIFEKMRQDF--------------NSTKITSQTLLTPEIIDLLEGECALIMEH 476 QHA HER+ EKM+ + K + E LI Sbjct: 1029 QHAIHERIRLEKMQDLYKLGPYDICRVDSDKYEYKFDLSPMRPGTRWPFTAHEMELIDTF 1088 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY-TLQDRIEN 535 +L G + G AI I +P LR+ + + + T D ++ Sbjct: 1089 SRNLKLWGFTYKV-GNGAIFIESVPMFCLTCLGHNDLREFLYTLESNGGQMATRPDAVDR 1147 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 I+ AC +I+ G + LL+E+ QC HGR + Sbjct: 1148 IIRNKACRSAIKFGHTLGHERSCELLKELATCRLPFQCVHGRSSM 1192 >gi|157418817|gb|ABV55114.1| DNA repair protein MutL-like protein [Giardia intestinalis] Length = 317 Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 15/182 (8%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSN 86 ELIEN+ DA++ + ++ + D G G+ + P+ R TSKI+ +D + Sbjct: 1 ELIENATDADAPAIGLFVSNNCYDLIMVYDTGHGIELADYPLLCHRFATSKITAFNDIYS 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPV 134 I +FGFRGEAL SI VS + ++S+ + ++ Sbjct: 61 IQSFGFRGEALASISYVSRMIVISKVENQPGHLAVYMNGKLHFDPETLAAEYTDFFTSTF 120 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKSNR 193 A N TI+ V DLF+ R N +++ + ++ ++ A + + S +F + Sbjct: 121 ASNSFTIICVTDLFYADSIRRNQIRNSKANLDMQDLLMSISAANHTREYSISFISDSQAI 180 Query: 194 YK 195 + Sbjct: 181 QR 182 >gi|68491028|ref|XP_710686.1| hypothetical protein CaO19.1605 [Candida albicans SC5314] gi|68491047|ref|XP_710677.1| hypothetical protein CaO19.9173 [Candida albicans SC5314] gi|46431910|gb|EAK91429.1| hypothetical protein CaO19.9173 [Candida albicans SC5314] gi|46431920|gb|EAK91438.1| hypothetical protein CaO19.1605 [Candida albicans SC5314] Length = 776 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 61/311 (19%), Positives = 106/311 (34%), Gaps = 23/311 (7%) Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 N +P K + I + S L + M+ + + Sbjct: 442 HQDNHGKNFYPVKHKLDDSEEEN-MTVISIGDETFQQYDERRPSKRLKRDMLRNMYNKKI 500 Query: 351 PKTHLPKYATSLTNTQEKLFLQEN-----------RLSTNDLLPSDDPTYSEDNDPVEES 399 + ++ N Q E+ S DL + Y E Sbjct: 501 VNSSQDILSSINKNLQSPQNQSESIVIKKEPDEVKPNSVEDLQTNQQQQYEEVESYQINK 560 Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 + I + + + L I+DQHA+ E+ FEK+ S KI Q L+ Sbjct: 561 QDFLKMKLIGQFNLGFIIVDFDDNNNLFIIDQHASDEKYNFEKLM---ASFKINYQLLIK 617 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFG---PNAIAIREIPAI----LSKKNIPQL 512 P ++L + L++++ E H G K + N I + +P + + +L Sbjct: 618 PIKLELSVIDQMLVIDNQEIFHNNGFKLKINSTPVDNEILLLTLPIYQNITFNLDDFNEL 677 Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 L +++ + D +I+ ILA AC SI G + +M ++ + Sbjct: 678 L-NLVSQQQDQVNPNLKCSKIKKILAMKACRSSIMIGTFLSKSKMREIISNLSTLDKPWN 736 Query: 573 CNHGRPTFIKL 583 C HGRPT L Sbjct: 737 CPHGRPTMRHL 747 Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 94/484 (19%), Positives = 182/484 (37%), Gaps = 66/484 (13%) Query: 138 PGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKM 196 GT + + LF +P R NF+K+ + E + + + I YP++ FT + +N K+ Sbjct: 18 SGTSIMIEQLFKNLPVRLKNFVKNSKKEFSKAINFVINYLIIYPQIKFTIYNVLNNHKKL 77 Query: 197 NFQSTNGN---FPERISQVIGEDFINNAVELNEKSN-EITLQGYTGIPTFN--RGNANQF 250 + G+ + + + G + N + L+ + +I L GY +F R ++ Sbjct: 78 ILATKGGDNTTIIDNLISIYGNNNNKNLLSLDLEITEDIKLVGYISSYSFGLGRSAPDRQ 137 Query: 251 YVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRN 310 ++++N R + K + I Y + +YP+ ++ + I+P VD+N+ P K+ + ++ Sbjct: 138 FLYLNKRPIVFKKLYKLINEIYKSYNHV-QYPIYIIDIVINPNLVDINLLPDKTNVLIKD 196 Query: 311 PTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA------TSLTN 364 T I I + + + + + + KT A TS Sbjct: 197 ETTILQTIETKLSEFFEVQDTMIIPKNENYQVKNSEIEIVEKTDNKNIAVHDDIDTSYKT 256 Query: 365 TQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTD 424 L+ +DL +D + D D E+ Q + + TD Sbjct: 257 KINATRLEGPSEDKDDLNGNDKQEKTGDQDEQEQENDDEQQRPEVDNDVINLSEPVRKTD 316 Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 D E E + + +I++ + L E + E+ Sbjct: 317 --KDSDNKKVSEIDNNENV-----ANQISTVNQPSNSQGVLSTNEQNEMSEN-------- 361 Query: 485 IKAERFGPNAIAIREI-PAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACY 543 IK F P + P+ + K+I I+DE + ++ ++ +I ++ Sbjct: 362 IKITTFEP---ILESAEPSTIENKHI------ILDEPVVLESSQ--ENNNNSIFSS---- 406 Query: 544 GSIRSG-------RKMQSIEMNRLL------REMEKNPNSSQCNHGR---PTFIKLKLSD 587 I+S + EMN+L E +K + Q NHG+ P KL S+ Sbjct: 407 HDIKSSPQNTCTADTL---EMNKLFCHQEHDEEEDKCDH--QDNHGKNFYPVKHKLDDSE 461 Query: 588 IEKL 591 E + Sbjct: 462 EENM 465 >gi|157418815|gb|ABV55113.1| DNA repair protein MutL-like protein [Giardia intestinalis] Length = 317 Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats. Identities = 48/223 (21%), Positives = 86/223 (38%), Gaps = 25/223 (11%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSN 86 ELIEN+ DA++ + ++ + D G G+ + P+ R TSKI+ +D + Sbjct: 1 ELIENATDADAPAIGLFVSNNCYDLIMVYDTGHGIELADYPLLCHRFATSKITAFNDIYS 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAM---------- 136 I +FGFRGEAL SI VS + ++S+ G K+ Sbjct: 61 IQSFGFRGEALASISYVSRMIVISKVENQP-GHLAVYMNGKLHFDPETLAAEYTDFFTST 119 Query: 137 ---NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKS- 191 N TI+ V DLF+ R N +++ + ++ ++ A + + S +F + Sbjct: 120 LASNSFTIICVTDLFYADSIRRNQIRNSKANLDMQDLLMSISAANHTREYSISFISDSQA 179 Query: 192 -------NRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK 227 ++ S + I + V + Sbjct: 180 IQRELQAWLDDIHTTSGMLSLISNIIESGVTALHFKPVTTRYE 222 >gi|157418823|gb|ABV55117.1| DNA repair protein MutL-like protein [Giardia intestinalis] Length = 317 Score = 135 bits (340), Expect = 2e-29, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 23/222 (10%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSN 86 ELIEN+ DA++ + ++ + D G G+ + P+ R TSKI+ +D + Sbjct: 1 ELIENATDADAPAIGLFVSNNCYDLIMVYDTGHGIELADYPLLCHRFATSKITTFNDIYS 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPV 134 I +FGFRGEAL SI VS + ++S+ + ++ + Sbjct: 61 IQSFGFRGEALASISYVSRMIVISKVENQPAHLAVYMNGKLHFDPETLAAEYTDFFTNTL 120 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKS-- 191 N TI+ V DLF+ R N ++S + ++ ++ A + + + +F + Sbjct: 121 VSNSFTIICVTDLFYADSIRRNQIRSSKASLDMQDLLMSISAANHTREYAISFISDSQAT 180 Query: 192 ------NRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK 227 ++ S + I + V + Sbjct: 181 QRELQAWLDDIHTTSGMLSLISNIIESRVTALHFKPVTTRYE 222 >gi|147768838|emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera] Length = 3804 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 86/229 (37%), Gaps = 37/229 (16%) Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM-------------RQD 446 + + Q + +II + L IVDQHAA E+ FE + Sbjct: 3428 KKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQSTVLNQQPLLRYGV 3487 Query: 447 FNSTKITSQTLLT------PEIIDLLEGECALIMEHDEDLHRLGIKAERF----GPNAIA 496 N ++TS LL P +DL E + H + + + G E Sbjct: 3488 QNIHEVTSIELLCVSYTIGPLRLDLSPEEEVIAFIHMDIIRKNGFALEEDLHAPPGQRFK 3547 Query: 497 IREIPAILSKKNIPQLLRDIIDEIIDSSTTYTL-------------QDRIENILATMACY 543 ++ +P + + ++++I + D ++ R+ +LA+ AC Sbjct: 3548 LKAVPFSKNITFGVEDVKELISTLADGQGECSILGTYKMDTCDSICPSRVRAMLASRACR 3607 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL-KLSDIEKL 591 S+ G + EM R+L + + C HGRPT L L+ I KL Sbjct: 3608 SSVMIGDPLGRKEMQRILEHLSDLKSPWNCPHGRPTMRHLVDLTTIYKL 3656 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 44/69 (63%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR +++ +++I +G++I S A+KEL+ENSLDA ++ +E + G+ +FQ+ DNG Sbjct: 2767 TIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQEWFQVIDNGC 2826 Query: 62 GMTSEEIPM 70 G+ + Sbjct: 2827 GIXPNNFKL 2835 Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 53/304 (17%), Positives = 100/304 (32%), Gaps = 9/304 (2%) Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK-SNEITLQGYTGIPTF 242 T +T K+ + + +G+ + I V G + N LN S+ + G+ + Sbjct: 2898 CTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLEPLNICLSDSSKVDGFVSKSGY 2957 Query: 243 N--RGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVH 300 R ++ + F+NGR V + + Y +YP+ ++ + R DVNV Sbjct: 2958 GSGRTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSR-QYPIAIMNFTVPTRAYDVNVT 3016 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 P K I F + I + + + ++K + S S ++ + Sbjct: 3017 PDKRKIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETBNSELNPPQTQILXS 3076 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 S + LQE S + P+ + I +++ + Sbjct: 3077 SKQLFPDGSDLQEEAHSEEQITEDQIPSKMVKSSTENMHAVKEMDHSYDKDSIEKDFSLR 3136 Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 G+ D + + EK NS I Q L E++ H + Sbjct: 3137 --VHGIKKAD---SFPKWDSEKTTMTINSDTIDHQVLSLSEMVVKGAVGNKGSSSHSSYI 3191 Query: 481 HRLG 484 G Sbjct: 3192 QSFG 3195 >gi|157418821|gb|ABV55116.1| DNA repair protein MutL-like protein [Giardia intestinalis] gi|157418825|gb|ABV55118.1| DNA repair protein MutL-like protein [Giardia intestinalis] Length = 317 Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 23/222 (10%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSN 86 ELIEN+ DA++ + ++ + D G G+ + P+ R TSKI+ +D + Sbjct: 1 ELIENATDADAPAIGLFVSNNCYDLIMVYDTGHGIELADYPLLCHRFATSKITTFNDIYS 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPV 134 I +FGFRGEAL SI VS + ++S+ + ++ + Sbjct: 61 IQSFGFRGEALASISYVSRMIVISKVENQPAHLAVYMNGKLHFDPETLAAEYTDFFTNTL 120 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKS-- 191 N TI+ V DLF+ R N ++S + ++ ++ A + + + +F + Sbjct: 121 VSNSFTIICVTDLFYADSIRRNQIRSSKASLDMQDLLMSISAANHTREYAISFISDSQAI 180 Query: 192 ------NRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK 227 ++ S + I + V + Sbjct: 181 QRELQAWLDDIHTTSGMLSLISNIIESGVTALHFKPVTTRYE 222 >gi|157418819|gb|ABV55115.1| DNA repair protein MutL-like protein [Giardia intestinalis] Length = 317 Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 88/222 (39%), Gaps = 23/222 (10%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSN 86 ELIEN+ DA++ + +++ + D G G+ + P+ R TSKI+ +D + Sbjct: 1 ELIENATDADAPAIGLLVSNNCYDLIMVYDTGHGIELADYPLLCHRFATSKITTFNDIYS 60 Query: 87 IHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPV 134 I +FGFRGEAL SI VS + ++S+ + ++ + Sbjct: 61 IQSFGFRGEALASISYVSRMIVISKVENQPAHLAVYMNGKLHFDPETLAAEYTDFFTNTL 120 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKS-- 191 N TI+ V DLF+ R N ++S + ++ ++ A + + + +F + Sbjct: 121 VSNSFTIICVTDLFYADSIRRNQIRSSKASLDMQDLLMSISAANHTREYAISFISDSQAI 180 Query: 192 ------NRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK 227 ++ S + I + V + Sbjct: 181 QRELQAWLDDIHTTSGMLSLISNIIESGVTALHFKPVTTRYE 222 >gi|51094589|gb|EAL23841.1| similar to PMS4 homolog mismatch repair protein - human [Homo sapiens] Length = 197 Score = 133 bits (334), Expect = 9e-29, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 69/184 (37%), Gaps = 30/184 (16%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G+ + G +++ NG G Sbjct: 30 IKPIDRKSVHQICSGQ---------------------------LKDYGVDLIEVSGNGCG 62 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ 120 + E +H TSKI + D + TFGFRGEAL S+ A+S +T+ + G + Sbjct: 63 VEEENFEGLTLKHHTSKIQEFADLPQVETFGFRGEALSSLCALSDVTISTCHVSAKVGTR 122 Query: 121 IAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + KI P G V V+ LF T+P + + + Sbjct: 123 LVFDHYGKIIQKTPYPHPRGMTVSVKQLFSTLPVHHKEFQRNIKKKRACFPFAFCRDCQF 182 Query: 180 PKVS 183 P+ S Sbjct: 183 PEAS 186 >gi|167948077|ref|ZP_02535151.1| DNA mismatch repair protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 73 Score = 133 bits (334), Expect = 1e-28, Method: Composition-based stats. Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 2/71 (2%) Query: 30 LIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNI 87 +IENSLDA ++R+E + GG Q+ DNG G+ +E+ +A+ RH TSKI+ DD I Sbjct: 1 MIENSLDAGATRIEIEVEQGGIKRIQVRDNGVGIHKDELTLALSRHATSKIASLDDLEQI 60 Query: 88 HTFGFRGEALP 98 H+ GFRGEAL Sbjct: 61 HSMGFRGEALA 71 >gi|330903915|gb|EGH34487.1| DNA mismatch repair protein [Pseudomonas syringae pv. japonica str. M301072PT] Length = 97 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 2/72 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSN 86 EL+ENSLD+ + R++ + G ++ D+G G++S+++P+A+ RH TSKI D D Sbjct: 1 ELLENSLDSGARRIDVDVEQAGIKLLKVRDDGGGISSDDLPLALARHATSKIRDLEDLER 60 Query: 87 IHTFGFRGEALP 98 + + GFRGEAL Sbjct: 61 VMSLGFRGEALA 72 >gi|330862099|emb|CBX72265.1| hypothetical protein YEW_EM19550 [Yersinia enterocolitica W22703] Length = 117 Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats. Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 2/91 (2%) Query: 51 KSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTL 108 ++ +I DNG G+ +++ +A+ RH TSKIS +D I + GFRGEAL SI +VS L L Sbjct: 16 RNLIRIRDNGCGIGKDDLALALARHATSKISSLEDLEAILSMGFRGEALASISSVSRLIL 75 Query: 109 MSRPPQNNTGAQIAISGEKISSVRPVAMNPG 139 SR + N Q G + G Sbjct: 76 TSRTAEQNEAWQAYAEGRDTGRDHQTCGSSG 106 >gi|218512334|ref|ZP_03509174.1| DNA mismatch repair protein [Rhizobium etli 8C-3] Length = 87 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 50/83 (60%), Positives = 64/83 (77%) Query: 512 LLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSS 571 L+R + DEI + T L ++E + ATMAC+GS+RSGR+++ EMN LLREME P S Sbjct: 4 LIRQLADEIAEWDTASGLSAKLEYVAATMACHGSVRSGRRLRPEEMNALLREMEVTPGSG 63 Query: 572 QCNHGRPTFIKLKLSDIEKLFGR 594 QCNHGRPT+I+LKLSDIE+LFGR Sbjct: 64 QCNHGRPTYIELKLSDIERLFGR 86 >gi|330948578|gb|EGH48838.1| DNA mismatch repair protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 73 Score = 130 bits (328), Expect = 5e-28, Method: Composition-based stats. Identities = 30/70 (42%), Positives = 51/70 (72%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 LS ++ NQIAAGE++ERP+ IKEL+ENSLD+ + R++ + G ++ D+G G++ Sbjct: 4 LLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIKLLKVRDDGGGIS 63 Query: 65 SEEIPMAVQR 74 S+++P+A+ R Sbjct: 64 SDDLPLALAR 73 >gi|207341693|gb|EDZ69678.1| YNL082Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 420 Score = 130 bits (327), Expect = 6e-28, Method: Composition-based stats. Identities = 68/388 (17%), Positives = 133/388 (34%), Gaps = 32/388 (8%) Query: 208 RISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILST 267 + D + ++ E+ + G A+ N Sbjct: 38 EFQNITSPDKARSLEKVVEEPVYFDIDGEKFQEKAVLSQADGLVFVDNECHEHTNDCCHQ 97 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 R +T + EI+P +++V P K+ R I + ++++ Sbjct: 98 ERRGSTDTEQDDE--ADSIYAEIEPVEINVRT-PLKNS---------RKSISKDNYRSLS 145 Query: 328 KKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDP 387 G++ + + + N + S ++ K QEN + D L + Sbjct: 146 D-GLTHRKFEDEILEYNLSTKNFKEISKNGKQMSSIISKRKSEAQENIIKNKDELEDFEQ 204 Query: 388 TYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ----TTDGLVIVDQHAAHERLIFEKM 443 V ++ ++ Q + +II L IVDQHA+ E+ FE + Sbjct: 205 GEKYLTLTVSKN---DFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETL 261 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIR 498 + T SQ L+ P+ ++L + +++++ + G K E FG + + Sbjct: 262 QAV---TVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSR-VKLL 317 Query: 499 EIPAILSKKNIPQLLRDIIDEIIDSST---TYTLQDRIENILATMACYGSIRSGRKMQSI 555 +P ++I I + +I ++ A AC SI G+ + Sbjct: 318 SLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSSIMIGKPLNKK 377 Query: 556 EMNRLLREMEKNPNSSQCNHGRPTFIKL 583 M R++ + + C HGRPT L Sbjct: 378 TMTRVVHNLSELDKPWNCPHGRPTMRHL 405 >gi|302840656|ref|XP_002951883.1| hypothetical protein VOLCADRAFT_61856 [Volvox carteri f. nagariensis] gi|300262784|gb|EFJ46988.1| hypothetical protein VOLCADRAFT_61856 [Volvox carteri f. nagariensis] Length = 187 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 7/178 (3%) Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 Q + +I+++ + IVDQHAA E+ FE++++ T+ + LL Sbjct: 1 QVLGQFNLGFILARHGPDVFIVDQHAAAEKTTFERLQRSVVLTRQPLLVPMALPAGVLLP 60 Query: 468 GECALIMEHDEDLHRLGIKA-ERFGPNAIAI-REIPAILSKKNIP-QLLRDIIDEIIDSS 524 + +I EH + R G ER + + +P + + + + +++ + Sbjct: 61 VDQLIIREHIDVFRRNGFDFVERLPDGRLLLLSSVPVSRATGQLGMEDVVELVGMLRSGE 120 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 I +LA+ AC S+ GR + EM RLL + C HGRPT Sbjct: 121 GAGG----IRAMLASRACRSSVMVGRPLNRGEMRRLLDGLADLRQPWNCPHGRPTMRH 174 >gi|316977014|gb|EFV60194.1| MutL C dimerization domain protein [Trichinella spiralis] Length = 785 Score = 129 bits (325), Expect = 1e-27, Method: Composition-based stats. Identities = 105/613 (17%), Positives = 190/613 (30%), Gaps = 76/613 (12%) Query: 20 IERPSIAIKELIENSLDAESS--RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 + S ++ L+ NSL A SS + + K FQI D+G GM + T Sbjct: 14 VLSFSDCVQILLLNSLRASSSIVVIRVHVE---KFKFQIIDDGDGMDQTML--------T 62 Query: 78 S--KISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIA------------ 122 S K+ ++ ++ + + SRP G + Sbjct: 63 SSDKMPAYLKDV-------------CKLADEVIIHSRPRGRAVGFKARYCAALKRSVDGS 109 Query: 123 -----ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 K S GT + V+ LF P R +K Q NL + R +++ Sbjct: 110 RTFSDCFFLKDSVQIQSRKCHGTTITVQKLFSKTPVRQKSIKPSQELENLKLRL-RWISV 168 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTN---GNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 +PKV +F + ++ + NE Sbjct: 169 KHPKVIIELHDESDQSCAFRSTRCETLSESFLQLFFEIYPHQLSDQIRFENEDFKLSLWI 228 Query: 235 GYTGIPTFN--RGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL-EID 291 G T + N +F + + E + GR + L ID Sbjct: 229 GTEESNTVSLQCIYWNDIPIFWQTELHTFVLVFHIDVISLIEKLKNGRKDSCSVFLLTID 288 Query: 292 PRQV-DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 R V V ++ + I QK ++ + L K Sbjct: 289 TRLVERFMVEGLRAIESCYKWKSLLEAIESLFQKPLSNGDSLQNEKLLSKENRCLLPGCK 348 Query: 351 PKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIAC 410 L + T+L ++ S N VE+ Sbjct: 349 FSFQLHENFTNLLPLLNDEKRSISQTPIYSNSTSKCTVEENSNILVEDEMQLVAVSSPVI 408 Query: 411 AQIHQNYIISQTTDG---------LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE 461 AQ ++I + T L++ DQHA ER+ E++ ++ ++ L+ Sbjct: 409 AQYDCKFVICRATVESKQNDRTALLLLFDQHAVSERVRLEQLLREHIVEGRIARARLSH- 467 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI--------PQLL 513 I++ + + + R GI+ F + I +P ++ + L Sbjct: 468 PIEINFFNSSKWFSFKDIIERYGIEI-NFENSRYLIFTVPICFARGKWNISQNCITARFL 526 Query: 514 RDIIDEIIDSST---TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 + + +I++ + L A AC G IR G ++ + L+R++ + Sbjct: 527 KSVFQQILEFGSLPSRRKLPPIFRRSFADWACRGGIRFGDRLTLNQCQNLIRQLVECEAP 586 Query: 571 SQCNHGRPTFIKL 583 C HGR + + L Sbjct: 587 FHCAHGRRSVVPL 599 >gi|302406813|ref|XP_003001242.1| DNA mismatch repair protein mutL [Verticillium albo-atrum VaMs.102] gi|261359749|gb|EEY22177.1| DNA mismatch repair protein mutL [Verticillium albo-atrum VaMs.102] Length = 628 Score = 129 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 67/279 (24%), Positives = 114/279 (40%), Gaps = 13/279 (4%) Query: 92 FRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISS--------VRPVAMNPGTIVE 143 FRGEAL SI ++HL++ ++ + + K++ + VA GT + Sbjct: 40 FRGEALASISHIAHLSVTTKTKDSAVAWRAHFLDGKLAPAKPGQSAEPKKVAGRDGTQIS 99 Query: 144 VRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNG 203 V DLFF IP R +S E N I D++ R AI V+F+ + ++ Q++ Sbjct: 100 VEDLFFNIPTRRRAFRSPSEEYNKIIDMVGRYAIHCQGVAFSCKKQGESGASVSVQASAS 159 Query: 204 NFPERISQVIGEDFINNAVEL--NEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQD 261 +R+ Q+ G N +E ++ G ++ +FIN R V+ Sbjct: 160 TT-DRVRQIYGSSVGNELIEFATSDDRWAFKADGLVTNANYHIKKTTFL-LFINHRCVES 217 Query: 262 KFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 I I YA +P P + L LEIDP +VDVNV + + R F+ Q+ Sbjct: 218 TTIRKAIEQVYATFLPKNGRPFIYLSLEIDPARVDVNVVCEQVRTKLAEVDTSRTFMTQT 277 Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 + + + S + + + P+ + Sbjct: 278 LLPG-AQWTDAASKSAVEDGDGAPPLAATSGSSRPRRNS 315 >gi|189196580|ref|XP_001934628.1| DNA mismatch repair protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187980507|gb|EDU47133.1| DNA mismatch repair protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 968 Score = 129 bits (323), Expect = 2e-27, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 25/190 (13%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVE--TVIAGGGKSFFQITDN 59 I L E ++ QI + I + + EL++NSLDA+++++E A GG + + DN Sbjct: 8 SILPLPEDVVAQIKSSTAILSLTDVLTELVKNSLDAKATKIEATVDFARGGCT---VEDN 64 Query: 60 GFGMTSEEIP---MAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ 114 G G++ E + +CTSK + G G L S+ AVS LT+ SR + Sbjct: 65 GLGISPLEFREDGGLGKLYCTSKYHARESL-----LGRNGTFLASLAAVSLLTIASRHHE 119 Query: 115 NNTGAQIAISGEKISS-------VRPVAMNPGTIVEVRDLFFTIPAR---LNFLKSEQVE 164 + + + + GT V VR+LF +P R + ++ E Sbjct: 120 YRSHNSLTFHHSNTVERQLPASAHQELHAKHGTRVTVRNLFGNLPVRVKQRSMGSGQRAE 179 Query: 165 TNLITDVIRR 174 + + D ++R Sbjct: 180 HDRLWDQLKR 189 Score = 90.9 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 51/209 (24%) Query: 426 LVIVDQHAAHERLIFEKMRQD---------------FNSTKITSQTLLTPEIIDLLEGEC 470 LV++DQHAA ER+ E + ++ + + S L P + E Sbjct: 725 LVLIDQHAADERVQVESLFRELCTPLPQARAYKSQLGHGVLVVSTMLEKPMQFAISSRER 784 Query: 471 ALIMEHDEDLHRLGIKAERF-----------GPNAIAIREIPAILSKKN--IPQLLRDII 517 H GI + + +++ +P +S++ P++L + Sbjct: 785 THFTTHAARFAAWGILYDILVSAFSSSSLEKDKHVLSVTTLPPAISERCKADPKVLISFL 844 Query: 518 DE-------------IIDSSTTYTLQDRIENIL----------ATMACYGSIRSGRKMQS 554 + + D + + + AC +I ++ Sbjct: 845 RSTVWKYVEDAHLPPLPQHGYSANKDDWVRRLATCPPGLVDLVNSRACRSAIMFNDTLEI 904 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 E L+R++ C HGRP+ + L Sbjct: 905 EECIELVRKLADCVFPFMCAHGRPSMVPL 933 >gi|330932033|ref|XP_003303623.1| hypothetical protein PTT_15919 [Pyrenophora teres f. teres 0-1] gi|311320247|gb|EFQ88278.1| hypothetical protein PTT_15919 [Pyrenophora teres f. teres 0-1] Length = 966 Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 25/190 (13%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVE--TVIAGGGKSFFQITDN 59 I L E ++ QI + I + + EL++NSLDA+++++E A GG + + DN Sbjct: 8 SILPLPEDVVAQIKSSTAIVSLADVLLELLKNSLDAKATKIEATVDFARGGCT---VEDN 64 Query: 60 GFGMTSEEIP---MAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ 114 G G++ E + +CTSK + G G L S+ A+S LT+ SR + Sbjct: 65 GLGISPLEFREDGGLGKLYCTSKYHARESL-----LGRNGTFLASLAAMSLLTVASRHHE 119 Query: 115 NNTGAQIAISGEKISS-------VRPVAMNPGTIVEVRDLFFTIPAR---LNFLKSEQVE 164 + + K + + GT V VR+LF +P R + + ++ E Sbjct: 120 YRSHNSVTFHHSKPVERQLPASAHQELHAKHGTRVTVRNLFGNLPVRVKQRSMVSGQRAE 179 Query: 165 TNLITDVIRR 174 + + D ++R Sbjct: 180 HDRLWDQLKR 189 Score = 87.8 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 66/209 (31%), Gaps = 51/209 (24%) Query: 426 LVIVDQHAAHERLIFEKMRQD---------------FNSTKITSQTLLTPEIIDLLEGEC 470 LV+VDQHAA ER+ E + +D + S L P + E Sbjct: 724 LVLVDQHAADERVQVETLFRDLCTPLPQALTYKSQLGQGVLVVSNMLEKPTQFVISNQES 783 Query: 471 ALIMEHDEDLHRLGIKAERF-----------GPNAIAIREIPAILSKKN--IPQLLRDII 517 H GI + + +++ +P +S++ P++L + Sbjct: 784 MHFTTHAARFAAWGILYDILRSTSSSSSSEKDKHLLSVTTLPPAISERCKADPKVLISFL 843 Query: 518 DE-------------IIDSSTTYTLQDRIENIL----------ATMACYGSIRSGRKMQS 554 + ++ D + + + AC +I + Sbjct: 844 RSTVWKYVEDPHLPPLPQHGSSANEDDWVRRLATCPPGLVDLVNSRACRSAIMFNDVLGI 903 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 E L+ ++ C HGRP+ + L Sbjct: 904 EECTELVHKLADCVFPFMCAHGRPSMVPL 932 >gi|290974082|ref|XP_002669775.1| predicted protein [Naegleria gruberi] gi|284083327|gb|EFC37031.1| predicted protein [Naegleria gruberi] Length = 419 Score = 128 bits (321), Expect = 3e-27, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 38/192 (19%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+KL + + + + +G I S IKELIEN+LDA+++ +E + GK I DNG G Sbjct: 77 IKKLPKHLQDTLKSGTNISSLSDCIKELIENALDAQATNIEIQLQ--GKECIIIKDNGHG 134 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIH---------------------------------T 89 + + +R+ T K + F+ + Sbjct: 135 IHQDNFETLCKRYYTHKFMNHFNTFNDNDKNVNNTTDNLNNNESSSNNHSHNNNENNNYY 194 Query: 90 FGFRGEALPSIGAVSH-LTLMSRPPQNNT--GAQIAISGEKISSVRPVAMNPGTIVEVRD 146 +G++GEAL SI +S + + ++ + I + +I S + MN GTI+ ++D Sbjct: 195 YGYKGEALNSICNLSKQVHIKTKYGDESELGTYLIYDTRGEIVSKTLIRMNRGTIITIQD 254 Query: 147 LFFTIPARLNFL 158 LF TIP R Sbjct: 255 LFSTIPVRKKCF 266 >gi|119570619|gb|EAW50234.1| hCG1989139 [Homo sapiens] Length = 173 Score = 127 bits (319), Expect = 5e-27, Method: Composition-based stats. Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 4/145 (2%) Query: 43 ETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSI 100 + + G +++DNG G+ E +H T KI + D + + TFGF+GEAL S+ Sbjct: 4 DLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTCKIQEFADLTEVETFGFQGEALSSL 63 Query: 101 GAVSHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFL 158 A+S +T+ + G ++ KI P G V V+ LF T+P R F Sbjct: 64 CALSDVTISTCHASAKVGTRLVFDHYGKIIQKTPYPHPRGMTVSVKQLFSTLPVRHKEFQ 123 Query: 159 KSEQVETNLITDVIRRMAIAYPKVS 183 ++ + +P+ S Sbjct: 124 RNIKKVQRACFPFAFCRDCQFPEAS 148 >gi|170111216|ref|XP_001886812.1| predicted protein [Laccaria bicolor S238N-H82] gi|164638170|gb|EDR02449.1| predicted protein [Laccaria bicolor S238N-H82] Length = 269 Score = 127 bits (318), Expect = 7e-27, Method: Composition-based stats. Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 10/170 (5%) Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 Q D L IVDQHA+ E+ FE ++ T+I SQ L P+ ++L + L E+ E L Sbjct: 80 QVMDDLFIVDQHASDEKYNFETLQLT---TRIQSQKLFRPQPLELTAADELLATENIEVL 136 Query: 481 HRLGIKAER-----FGPNA-IAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ-DRI 533 + G + E G + + + P S + L +II + D T ++ + Sbjct: 137 RQNGFEIEVDDSECSGQGSRLKLVAQPISKSTVFGMKDLEEIIHLMRDRPTGQMVRCSKA 196 Query: 534 ENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + A AC S+ G + S +M +LR M C HGRPT L Sbjct: 197 RAMFAMRACRKSVMIGMPLNSHQMLTVLRHMGTIDQPWNCPHGRPTMRHL 246 >gi|253747389|gb|EET02113.1| Pms1-like protein [Giardia intestinalis ATCC 50581] Length = 731 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 119/352 (33%), Gaps = 16/352 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR LS I A + P I L+ENSLDA ++ + V+ G G + DNG Sbjct: 13 RIRSLSASDSRLILATQQFPDPHRVISALLENSLDAGATEIAVVLEGAGIRSITVNDNGH 72 Query: 62 GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 G+ + T +I+ S + +GE++ I A+ + + S + + Sbjct: 73 GIDLATLQTLG----TCRITTASSQSNVGAHKGESIFLISALGTVLITSSTGDDP--YER 126 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAIA 178 +S + ++ + GT V ++ L+ +P R + + IT+ I+ A+A Sbjct: 127 VVSEDTCTARHATRVGVGTTVVIQSLYEPVPVRQKYFSLASPRKKLLLSITEAIQSYALA 186 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 + F + + N I + E ++ Sbjct: 187 NYTLGFRLVMDEIAYVDVRSAPRNTIHERYIELFGQDLGSLVGFFSLETRLGYDVKASLA 246 Query: 239 IPTFNRG------NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 P +A + ++ NGR V ++ I+ YA P+ L L + P Sbjct: 247 GPDTGVTKHTKLGHARKLFLSTNGRPVLCPTLIEAIQQTYARITATH-IPIGALNLTLPP 305 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 ++ + + + + + S + + Sbjct: 306 GTYTFMRSTPYDTLQMQGLDTFAGLLSEEYLAWLLRHDKSIPANSYPNRSAP 357 Score = 113 bits (284), Expect = 7e-23, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 77/212 (36%), Gaps = 30/212 (14%) Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI 462 ++ Q +Q+++++Q D ++DQHAAHE F + ++ Q + P Sbjct: 496 NFANLKYICQYNQSFLLAQLDDTFFLIDQHAAHEAKYFSDYWHNPQCY-LSKQKTIAPLK 554 Query: 463 IDLLEGECALIMEHDE--DLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII--- 517 ++L E + E +G + G A+ + P++ + R+ + Sbjct: 555 LELRPDEKLCLEEFLSSTLFDIIGFELRISGEYAL-LSAFPSLFGQTLTEDDFREYLLLL 613 Query: 518 --------------DEIIDSSTTYTL---------QDRIENILATMACYGSIRSGRKMQS 554 E + S L RI I A+ +C S+R G + Sbjct: 614 YGHTREYIESILRISEAEEKSREKMLVRILHNNIAPPRIRKIFASKSCKASVRLGDPLLD 673 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 R++ ++ C HGRP L L+ Sbjct: 674 STAKRIIADLAYCEKPFNCPHGRPVLRFLDLT 705 >gi|302852293|ref|XP_002957667.1| hypothetical protein VOLCADRAFT_35772 [Volvox carteri f. nagariensis] gi|300256961|gb|EFJ41216.1| hypothetical protein VOLCADRAFT_35772 [Volvox carteri f. nagariensis] Length = 159 Score = 126 bits (317), Expect = 9e-27, Method: Composition-based stats. Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 11/162 (6%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++L + ++I +G + A+ EL+ NS+D+ + V + +F + D+G G Sbjct: 1 IQQLPGVLTDKIRSGVTLNSLPEAVAELLANSIDSGAKSVTVIFNPRALNFV-VEDDGHG 59 Query: 63 MTSEEIPMAVQRHCTSKISD--DFSN-IHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTG 118 + S + R+CTSKI D N + T GFRGEA+ S+ +V+ + + +R Sbjct: 60 IAS--LDALGVRYCTSKIRSMADLRNGVRTLGFRGEAISSLFSVAEEVCITTRARGTFVT 117 Query: 119 ----AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLN 156 + S + + GT V V+ L + P R Sbjct: 118 LSKQVKSGGSHVQTGPSTVQLAHSGTTVSVKKLLYNQPVRQR 159 >gi|226293032|gb|EEH48452.1| DNA mismatch repair protein [Paracoccidioides brasiliensis Pb18] Length = 1014 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 19/170 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSR--VETVIAGGGKSFFQITDN 59 I+ L ++ Q+ + I + + EL++NSLDA + + GG + D+ Sbjct: 8 SIQPLPPDVVAQLKSSISISHLNGVVLELLKNSLDAGAETVSINVDFRRGGC---VVEDD 64 Query: 60 GFGMTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ E + H TSK + + +G +G L S+ +++ +T+ S + Sbjct: 65 GHGIMPIEFLDGGKLAKLHHTSKFNS-LGEV--YGRKGLFLASLVSLALVTITSHHESDP 121 Query: 117 TGAQIAISGEKIS--------SVRPVAMNPGTIVEVRDLFFTIPARLNFL 158 T + K + + GT V V DLF +P R+ Sbjct: 122 TTNTLIYHRSKPISRLTPAPLHHELDSRDHGTRVTVTDLFGNLPVRVKHR 171 Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 73/223 (32%), Gaps = 61/223 (27%) Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP----------EIIDLLEGECA 471 LV+VDQHAA ER E++ D + S + T + + E Sbjct: 737 NQQNLVLVDQHAADERCRVEQLFDDLFAPSAESASSPTCGVNLSTLPKPIVFKVSLQEGE 796 Query: 472 LIMEHDEDLHRLG--IKAERFGPN--AIAIREIPAILSKKN--IPQLLRDIID-EIIDSS 524 L+ H G R N + + ++P +++++ P+L++D++ EI D Sbjct: 797 LLQSHSNYFATWGCCYTLSRSEKNYRTVTVIKLPTLIAERCRLEPKLVKDLLRGEIWDRK 856 Query: 525 T--------------------------------------------TYTLQDRIENILATM 540 I ++L + Sbjct: 857 DYGRRCCTAGSQMLSKVPSEAGGLKEPPPKENVQPAAARHSWLERIGDCPKAIIDLLNSR 916 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 AC S+ + E L+ + + QC HGRP+ I + Sbjct: 917 ACRSSVMFNDALSRDECENLVSRLARCAFPFQCAHGRPSMIPI 959 >gi|225683672|gb|EEH21956.1| DNA mismatch repair protein [Paracoccidioides brasiliensis Pb03] Length = 980 Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 19/170 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSR--VETVIAGGGKSFFQITDN 59 I+ L ++ Q+ + I + + EL++NSLDA + + GG + D+ Sbjct: 8 SIQPLPPDVVAQLKSSISISHLNGVVLELLKNSLDAGAETVSINVDFRRGGC---VVEDD 64 Query: 60 GFGMTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ E + H TSK + + +G +G L S+ +++ +T+ S + Sbjct: 65 GHGIMPIEFLDGGKLAKLHHTSKFNS-LGEV--YGRKGLFLASLVSLALVTITSHHESDP 121 Query: 117 TGAQIAISGEKIS--------SVRPVAMNPGTIVEVRDLFFTIPARLNFL 158 T + K + + GT V V DLF +P R+ Sbjct: 122 TTNTLIYHRSKPISRLTPAPLHHELDSRDHGTRVTVTDLFGNLPVRVKHR 171 Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 61/199 (30%), Gaps = 61/199 (30%) Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP----------EIIDLLEGECA 471 LV+VDQHAA ER E++ D + S + T + + E Sbjct: 737 NQQNLVLVDQHAADERCRVEQLFDDLFAPSAESASSPTCGVNVSTLPKPIVFKVSLQEGE 796 Query: 472 LIMEHDEDLHRLG--IKAERFGPN--AIAIREIPAILSKKN--IPQLLRDIID------- 518 L+ H + G R N + + ++P +++++ P+L++D++ Sbjct: 797 LLQSHSDYFATWGCCYTLSRIEKNYRTVTVIKLPTLIAERCRLEPKLVKDLLRGEIWDRK 856 Query: 519 ----------------------EIID----------------SSTTYTLQDRIENILATM 540 ++ + I ++L + Sbjct: 857 DHGRRCCTAGSQMLSKVPSEAGDLKEPPPKENVQPAAARHSWLERIGDCPKAIIDLLNSR 916 Query: 541 ACYGSIRSGRKMQSIEMNR 559 AC S+ + E Sbjct: 917 ACRSSVMFNDALSRDECES 935 >gi|205829286|sp|P0C857|PM2LC_HUMAN RecName: Full=Putative postmeiotic segregation increased 2-like protein 12 Length = 166 Score = 125 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 3/136 (2%) Query: 43 ETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSI 100 + + G +++DNG G+ E +H T KI + D + + TFGF+GEAL S+ Sbjct: 10 DLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTCKIQEFADLTEVETFGFQGEALSSL 69 Query: 101 GAVSHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLK 159 A+S +T+ + G ++ KI P G V V+ LF T+P R + Sbjct: 70 CALSDVTISTCHASAKVGTRLVFDHYGKIIQKTPYPHPRGMTVSVKQLFSTLPVRHKEFQ 129 Query: 160 SEQVETNLITDVIRRM 175 + + D I R Sbjct: 130 RNIKKGSTSADFINRY 145 >gi|148229785|ref|NP_001085796.1| mutL homolog 3 [Xenopus laevis] gi|49115413|gb|AAH73356.1| MGC80774 protein [Xenopus laevis] Length = 1235 Score = 125 bits (315), Expect = 1e-26, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 108/283 (38%), Gaps = 31/283 (10%) Query: 73 QRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKIS 129 R+ TSK D N+ GFRGEA+ SI VS + + S+ + I K+ Sbjct: 1 MRYYTSKCHSLNDLENLKFHGFRGEAIASIANVSSIVEVSSKCKNASKTFYKLIQNGKLL 60 Query: 130 SVRPVAM---NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 SV+ + GT V +LF+ +P R + + VE I + +++ +P VSF+ Sbjct: 61 SVQEADTSRPSAGTTFSVYNLFYNLPVRRKCMD-QTVEFENIRQRVESLSLIHPSVSFSL 119 Query: 187 STIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGN 246 S + + + R Q+ G E+ K E + GY N Sbjct: 120 K-NDSMHSVVLQLAKTKDVRSRFCQIYGLPRSQKLCEIQHKVKEFDMWGYIS--CEAHYN 176 Query: 247 ANQFYVFINGRTVQDKFILSTI--------------RTAYAETIPLGR-------YPVVV 285 Y+++N R V + I ++ GR + + V Sbjct: 177 KRMQYLYVNKRLVLKTKLHQLIDFLLRKESSICKPKNINVGKSSSPGRSRSCQELHGIFV 236 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 + + + DV PAK+ I F++ + + + + + + + Sbjct: 237 INIYCHYSEYDVCFEPAKTLIEFKDWDTVLHCVEEGTRAFLKR 279 Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 84/220 (38%), Gaps = 27/220 (12%) Query: 391 EDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS- 449 E V+ + + Q + LV+VDQHAAHER+ E++ D Sbjct: 957 EMMHSVKVLQQVDNKFIACLMSTEMKVGSEQDGNLLVLVDQHAAHERVRLEQLIADSYES 1016 Query: 450 --------TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE--RFGPNAIAIRE 499 ++ + + P +++ E + L+ +G+ + + Sbjct: 1017 GPEDDAGRRQLKTSIISPPLELNVTEMQYRLLRVLARSSQNIGLSLSFPDTPGTRVLVSA 1076 Query: 500 IPAILSKKNI-----------PQLLRDIIDEIIDS-----STTYTLQDRIENILATMACY 543 +P ++ L+++ + E ++ + T+ + +LA+ AC+ Sbjct: 1077 VPVCFVEREANEIHRGRSTVAKNLVQEFLQEQVELLQMTGRASGTIPLTVLKVLASQACH 1136 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 G+++ K+ + L++ + + QC HGRP + L Sbjct: 1137 GAVKFNDKLSLDDCKHLMQCLSRCSLPFQCAHGRPAILPL 1176 >gi|325088725|gb|EGC42035.1| DNA mismatch repair protein [Ajellomyces capsulatus H88] Length = 994 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 19/170 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 I+ L ++I Q+ + I + + EL++NSLDA + V + GG + D+ Sbjct: 7 SIQPLPPEVIAQLTSSIAISHLNGVVLELLKNSLDAGAKTVSINVDFPKGGC---VVEDD 63 Query: 60 GFGMTSEEI---PMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ E + H +SK + +G +G L S+ +++ +T+ SR + Sbjct: 64 GHGILPAEFLEGSNLAKLHHSSKFNSQHEV---YGRKGVFLASLVSLALVTITSRHESAS 120 Query: 117 TGAQIAISGEK--------ISSVRPVAMNPGTIVEVRDLFFTIPARLNFL 158 T + + + + GT V V DLF +P R+ Sbjct: 121 TTNTVMYHHARAISILTPAPLQHEINSRDHGTRVTVTDLFGNLPVRVKHR 170 Score = 100 bits (250), Expect = 6e-19, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 72/223 (32%), Gaps = 62/223 (27%) Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNS-------------TKITSQTLLTPEIIDLLEGE 469 LV+VDQHAA ER E++ + ++ + +L P + E Sbjct: 717 QQNLVLVDQHAADERCRVEQLFDELCGTTTATPDSSSFCRGRVNTASLPKPISFQVSPQE 776 Query: 470 CALIMEHDEDLHRLGIKAERFGP----NAIAIREIPAILSKKN--IPQLLRDIID-EIID 522 L+ H G + + + ++PA+++++ PQL D++ EI D Sbjct: 777 GELLKSHSGYFESWGCYYSLSNSERNYHTVTVDKLPALIAERCRLEPQLAIDLLRGEIWD 836 Query: 523 SST------------------------------------------TYTLQDRIENILATM 540 I ++L + Sbjct: 837 RKDHGRRDQTSFSPTLSSGNPEAGNSENSQGEAPPTIARQSWLERISDCPKAIVDLLNSR 896 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 AC SI + E L+ ++ QC HGRP+ I + Sbjct: 897 ACRSSIMFNDILSPAECQNLISKLALCAFPFQCAHGRPSMIPI 939 >gi|167377623|ref|XP_001734471.1| DNA mismatch repair protein mutL [Entamoeba dispar SAW760] gi|165903994|gb|EDR29367.1| DNA mismatch repair protein mutL, putative [Entamoeba dispar SAW760] Length = 606 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 94/603 (15%), Positives = 178/603 (29%), Gaps = 96/603 (15%) Query: 30 LIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHT 89 LIEN S V +I NG + +EI +++D Sbjct: 31 LIENK---GYSSVSIWCDK-EIKEIKIIVNGIQIDEQEINTL--------LNEDIFK--- 75 Query: 90 FGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISG-------EKISSVRPVAMNPGTIV 142 E + +S T+++ + K S++ +N IV Sbjct: 76 -----E----LNNISRCTILTTLLSQEESIRYIYEKLTIKNGKWKSESLKEYQLNKQLIV 126 Query: 143 EVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTN 202 + LF P R + I I I + K +N Q T Sbjct: 127 YLERLFENTPERKETIS-------KIIQNIIGYHIIHYKKVIEIKWNNETCCLLNSQETM 179 Query: 203 GNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDK 262 E I ++F + + Y + + +N + Sbjct: 180 KKSYENIFHYQMKEFSTLYSFNSITIYGLR---YLSKDMKWNNTKEHYIIMVNDYLICHN 236 Query: 263 FILSTIRTAYAETIPLGRY----PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFI 318 + I + + + + P L ++I HP ++ I Sbjct: 237 SLNQMINQIHCKYFSIPQTHILTPPFFLQIKI------PLFHPQYPLYFEDENNLLLWII 290 Query: 319 IQSIQKAINKKGISTSSVLSKKMIS----------------------------------- 343 ++ + I ++ S Sbjct: 291 KFLSKEFFQEILILPPPIIQYPFYSHIQLKHPKSSPPSPKKQRIFALSYSIQGRKIKEKE 350 Query: 344 --SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE--ES 399 + Q N K + KY S + +K N+ + S D N + + Sbjct: 351 KINLPQMNKTKYRMNKYKESKSRISKKTIYSIAIPYLNNNIISLDENIKYFNHIIPLNKI 410 Query: 400 EATHYQLGIACAQIHQNYIIS--QTTDGLVIVDQHAAHERLIFEK-MRQDFNSTKITSQT 456 + Q + +II +T L DQHA HER++FEK + Q+ Sbjct: 411 TKDDIKKIQVIGQFGKKFIICLNKTNGLLYGFDQHAVHERILFEKNWKMLEEEKSNYLQS 470 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 I + + ++ ++ + L I N I P + K+ + DI Sbjct: 471 FHCSLNIIVNSSQLQILQKYKYQFNNLNINYSIQ-YNKIYFNSFPILFGKQITCSEIMDI 529 Query: 517 IDEIIDSSTTYTLQ--DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 +++I S+ ++ I +I+A+ +C +I + E +L+ ++ + C Sbjct: 530 VNQIDISNEFPPIKHISIIRHIVASQSCRNAIMFNDILTLEECQKLINQLSQCSCPFICA 589 Query: 575 HGR 577 HGR Sbjct: 590 HGR 592 >gi|295665793|ref|XP_002793447.1| DNA mismatch repair protein [Paracoccidioides brasiliensis Pb01] gi|226277741|gb|EEH33307.1| DNA mismatch repair protein [Paracoccidioides brasiliensis Pb01] Length = 1012 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 19/170 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSR--VETVIAGGGKSFFQITDN 59 I+ L ++ Q+ + I + + EL++NSLDA + + GG + D+ Sbjct: 7 SIQPLPLDVVAQLKSSISISHLNGVVLELLKNSLDAGAGTVSINVDFRKGGC---VVEDD 63 Query: 60 GFGMTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ E + H TSK + + +G +G L S+ +++ +T+ SR + Sbjct: 64 GHGIMPIEFLDGGKLAKLHHTSKFNS-LGEV--YGRKGLFLASLVSLALVTITSRHKSDP 120 Query: 117 TGAQIAISGEKIS--------SVRPVAMNPGTIVEVRDLFFTIPARLNFL 158 T + K + + GT V V DLF +P R+ Sbjct: 121 TTNTLIYHRSKPISRLTPAPLHHELDSRDHGTRVTVTDLFGNLPVRVKHR 170 Score = 103 bits (257), Expect = 9e-20, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 74/222 (33%), Gaps = 60/222 (27%) Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP----------EIIDLLEGECA 471 LV+VDQHAA ER E++ D + S + T + + E Sbjct: 736 NQQNLVLVDQHAADERCRVEQLFDDLFAPSAESDSFPTCGVNVSTLSKPIVFKVSLQEGE 795 Query: 472 LIMEHDEDLHRLG--IKAERFGPN--AIAIREIPAILSKKN--IPQLLRDIID-EIIDSS 524 L+ H + G R N + + ++P +++++ P+L++D++ EI D Sbjct: 796 LLQSHSDYFATWGCCYTLSRGERNYRTVTVNKLPTLIAERCRLEPKLVKDLLRGEIWDRK 855 Query: 525 TTYTL-------------------------------------------QDRIENILATMA 541 I ++L + A Sbjct: 856 DHGRRCCTAGSQMLSKVPSEAGDPKEPPKENVQPAAARHSWLERIGDCPKAIIDLLNSRA 915 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 C S+ + E L+ + + QC HGRP+ I + Sbjct: 916 CRSSVMFNDALSRDECENLVSRLARCAFPFQCAHGRPSMIPI 957 >gi|225560451|gb|EEH08732.1| DNA mismatch repair protein [Ajellomyces capsulatus G186AR] Length = 994 Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats. Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 19/170 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 I+ L ++I Q+ + I + + EL++NSLDA + V + GG + D+ Sbjct: 7 SIQPLPPEVIAQLTSSIAISHLNGVVLELLKNSLDAGAKTVSINVDFPKGGC---VVEDD 63 Query: 60 GFGMTSEEI---PMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ E + H +SK + +G +G L S+ +++ +T+ SR + Sbjct: 64 GHGILPAEFLEGSNLAKLHHSSKFNSQHEV---YGRKGVFLASLVSLALVTITSRHESTS 120 Query: 117 TGAQIAISGEK--------ISSVRPVAMNPGTIVEVRDLFFTIPARLNFL 158 T + K + + GT V V DLF +P R+ Sbjct: 121 TTNTVMYHHAKAISILTPAPLQHEINSRDHGTRVTVTDLFGNLPVRVKHR 170 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 71/223 (31%), Gaps = 62/223 (27%) Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNS-------------TKITSQTLLTPEIIDLLEGE 469 LV+VDQHAA ER E++ + ++ + +L P + E Sbjct: 717 QQNLVLVDQHAADERCRVEQLFDELCDTTTATPDSSSFCRGRVNTASLPKPISFQVSPQE 776 Query: 470 CALIMEHDEDLHRLGIKAERFGPN----AIAIREIPAILSKKN--IPQLLRDIID-EIID 522 L+ H G + + ++PA+++++ PQL D++ EI D Sbjct: 777 GELLKSHSGYFESWGCYYSLSSSERNYLTVTVDKLPALIAERCRLEPQLAIDLLRGEIWD 836 Query: 523 SSTTYTL------------------------------------------QDRIENILATM 540 I ++L + Sbjct: 837 RKDHERRDQTSFSQTLSSGNPEAGNSENSQGEASPTIARQSWLERISDCPKAIVDLLNSR 896 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 AC SI + E L+ ++ QC HGRP+ I + Sbjct: 897 ACRSSIMFNDILSPAECQNLISKLALCAFPFQCAHGRPSMIPI 939 >gi|114618413|ref|XP_001175204.1| PREDICTED: similar to Chain A, N-Terminal 40kda Fragment Of Nhpms2 Complexed With Adp, partial [Pan troglodytes] Length = 126 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 3/120 (2%) Query: 45 VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGA 102 + G +++DNG G+ E +H T KI + D + + TFGF+GEAL S+ A Sbjct: 2 KLKDYGVDLIEVSDNGCGVEEENFEGLTLKHHTCKIQEFADLTEVETFGFQGEALSSLCA 61 Query: 103 VSHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE 161 +S +T+ + G ++ + KI P GT V V+ LF T+P R + Sbjct: 62 LSDVTISTCHASAKVGTRLVFDHDGKIIQKTPYPHPRGTTVSVKQLFSTLPVRHKEFQRN 121 >gi|21739376|emb|CAD38732.1| hypothetical protein [Homo sapiens] Length = 801 Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S TL+ P I + E + L+ + Sbjct: 567 LVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCY 626 Query: 477 DEDLHRLG--IKAERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 ++L LG + + + ++P ++ + + +R+ ++ Sbjct: 627 HKNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLEL 686 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP Sbjct: 687 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRP 746 Query: 579 TFIKLKLSDIEKL 591 + + L +DI+ L Sbjct: 747 SMLPL--ADIDHL 757 >gi|67528334|ref|XP_661969.1| hypothetical protein AN4365.2 [Aspergillus nidulans FGSC A4] gi|40741336|gb|EAA60526.1| hypothetical protein AN4365.2 [Aspergillus nidulans FGSC A4] gi|259482825|tpe|CBF77674.1| TPA: DNA mismatch repair protein (Mlh3), putative (AFU_orthologue; AFUA_4G06490) [Aspergillus nidulans FGSC A4] Length = 870 Score = 124 bits (311), Expect = 4e-26, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 85/216 (39%), Gaps = 32/216 (14%) Query: 400 EATHYQLGIACAQIHQNYIISQTTD----GLVIVDQHAAHERLIFEKMRQDFNSTKITSQ 455 Q Q+ Q +I+ + D LV++DQHAA ER E++ F + Sbjct: 621 HKCDLQTARVIGQVDQKFILVEIPDANASTLVLIDQHAADERCRIERLYSGFFNGSEVQT 680 Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERFGPNAIAIREIPAILSKK--- 507 + P +I + E +L + E GI+ G +I++ +P +++++ Sbjct: 681 IEVEPIVIAIPPVETSLFRQQAEFFQSWGIEYMIGHASESGKASISVSALPTLIAERCRA 740 Query: 508 NIPQLLRDIIDEII----------DSSTTYTLQDR----------IENILATMACYGSIR 547 QL+ + EI ++ T + +D I ++L + AC +I Sbjct: 741 EPEQLIGILRAEIWKRTEERPQTFNAKGTDSAEDWVRQIAGCPQGIRDMLNSRACRTAIM 800 Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + E L+ + QC HGRP+ + L Sbjct: 801 FNDVLSVDECRTLVSRLASCVFPFQCAHGRPSMVPL 836 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 60/442 (13%), Positives = 144/442 (32%), Gaps = 66/442 (14%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 I+ L + + +I + +I + + EL++N+LDA + + + GG + D+ Sbjct: 6 PIQPLPQDVAAKIRSSTLITHLNGVVLELVKNALDANAQCIFVTVDYRRGGC---VVEDD 62 Query: 60 GFGMTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRP-PQN 115 G G+ E + H TS+ ++G +G L S+ A+S LT+ S Sbjct: 63 GEGIAPAEFEPGGGLGKAHHTSRFGTS----SSYGRKGCFLASLSALSLLTITSHHYRHA 118 Query: 116 NTGAQIAISGEKISSVRPVAMN-------PGTIVEVRDLFFTIPAR---LNFLKSEQVET 165 +T + I+ + P + GT V DLF +P R + + Sbjct: 119 STNTVMFHHAHPIARLFPAPRHHRLKFSDHGTRVTANDLFGNMPVRVKSRALALQKPDQL 178 Query: 166 NLITDVIRR----MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERI-----------S 210 + D +++ + I+ ++ + K + + + + Sbjct: 179 DHQWDDLKQLLVALMISNDRLQKLSVSETDKERKFTIRPRHDPLAGDLDLTRLSSILSQA 238 Query: 211 QVIGEDFINNAVELNEKSNEITLQGYTGI----------------PTFNRGNANQFYVFI 254 ++ + ++ ++T+ + P F++ AN Y Sbjct: 239 GLVDAARMQKWHYVSAAVPQLTIHAALSLVPSPSKKVQFISLGAEPVFSQSQANILYSEA 298 Query: 255 NGRTVQ-DKFILSTIRTAYAETI-------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYI 306 N D + +++ I + ++P+ + + V + Sbjct: 299 NRLFSHSDFGTTGNVPSSHGSGIEERPRSPAVNKWPMFYIQI----GSVGTIGSDEELPE 354 Query: 307 RFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQ 366 ++ I + I I + + + + +++ + Y+ S + Sbjct: 355 SDKSLQRILDIIGLMINEFLKEHKLRPRGGRTQRQAFEEEASVCSQAVGKHYSNSSSELS 414 Query: 367 EKLFLQENRLSTNDLLPSDDPT 388 E+ F + + Sbjct: 415 ERQFKLPSSSRPGPGGHFGAWS 436 >gi|313608848|gb|EFR84633.1| DNA mismatch repair protein MutL [Listeria monocytogenes FSL F2-208] Length = 70 Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 47/66 (71%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +L++ + N+IAAGE++ERP+ +KEL+EN++DA S+ ++ ++ G + I DNG G Sbjct: 5 IVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVIDILVEEAGLNKITIIDNGSG 64 Query: 63 MTSEEI 68 + E++ Sbjct: 65 IEEEDV 70 >gi|67473435|ref|XP_652484.1| DNA mismatch repair protein mutL [Entamoeba histolytica HM-1:IMSS] gi|56469340|gb|EAL47098.1| DNA mismatch repair protein mutL, putative [Entamoeba histolytica HM-1:IMSS] Length = 615 Score = 124 bits (310), Expect = 6e-26, Method: Composition-based stats. Identities = 70/540 (12%), Positives = 159/540 (29%), Gaps = 81/540 (15%) Query: 102 AVSHLTLMSRPPQNNTGAQIAIS----------------GEKISSVRPVAMNPGTIVEVR 145 ++S ++M+ + K ++ +N +V + Sbjct: 79 SISRCSIMTSLLSQEYSFRYIYEVCFFNSFQKRLIMKNGRWKKERLKQYQLNNQLVVCLE 138 Query: 146 DLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNF 205 LF P R + + + I I + K+ ++ Q T Sbjct: 139 KLFENTPER-------KETFSQLIQDIIGYHIIHYKIGIQIKWNNETYCLLDSQPTMKKC 191 Query: 206 PERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFIL 265 E I ++F + + Y + + +N + + Sbjct: 192 YENIFHYQMKEFSTLYSFNSITIYGLR---YLSKDMKWNNTKYHYIIMVNDYLIHHNSLN 248 Query: 266 STIRTAYAETIPLGRY----PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 I + + + + P L ++I HP + I Sbjct: 249 QLINQIHCKYYGISQSHILTPPFFLQIKIPF------FHPQYPLHFEDENNFLLWIIKFL 302 Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDNA------------------------------- 350 + +++ + + S + Sbjct: 303 SNEFLSELLVLPPPITQYPFYSHIQFQHPKSSPPSPKKQRIFALSYSIQGREIKEKETTK 362 Query: 351 -PKTHLPKYATSLTNTQEKLFLQE-------NRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 P+ + KY + ++ + + N + ++ Y P + Sbjct: 363 IPQINKTKYGMNRHKPSKRRISNKTIYSIAIPYVHYNIISLQENIKYFSHIIPSNKITKD 422 Query: 403 HYQLGIACAQIHQNYIIS--QTTDGLVIVDQHAAHERLIFEK-MRQDFNSTKITSQTLLT 459 + Q + +II + L DQHA HER++FEK R T Q+ Sbjct: 423 DIKKIQVIGQFGKKFIICLNKRNGLLYGFDQHAVHERILFEKNWRMLEQETSTCLQSFQC 482 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 ++ + ++ ++ ++L I N + + P I K+ + DI+++ Sbjct: 483 SLHKNVNSSQLQVLQKYKYQFNKLNISYSIQ-YNKVYFKSFPIIFGKQLTCSEIMDIVNQ 541 Query: 520 IIDSSTTYTLQ--DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 I + ++ I +I+A+ +C +I + E +L+ ++ + C HGR Sbjct: 542 IDICNEFPGIKHLSIIRHIVASQSCRNAIMFNDNLTLEECKKLISQLSECSCPFICAHGR 601 >gi|46109464|ref|XP_381790.1| hypothetical protein FG01614.1 [Gibberella zeae PH-1] Length = 845 Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats. Identities = 77/444 (17%), Positives = 149/444 (33%), Gaps = 67/444 (15%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L + ++++I + I + + LI NSLDA +S+V + + + DNG Sbjct: 1 MTIRQLPQDVVDKIKSSVNITSLNGVVCGLIANSLDAGASKVNISV-DYARGNCTVEDNG 59 Query: 61 FGMTSEEIPM---AVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+T EE + H TSK G G+ L S+ S LT+ S ++ + Sbjct: 60 SGVTPEEFKDGGGLGKLHHTSKWPT---RSSLHGKHGDFLASLATFSLLTITSHHERHIS 116 Query: 118 GAQIAISGEKI--------SSVRPVAMNPGTIVEVRDLFFTIPARLNF-------LKSEQ 162 I + ++ R V + GT +RDLF T+P R+ ++ Sbjct: 117 HNSITVHNSRVLARQLPTPPESRLVNFDHGTRTTIRDLFGTMPVRVKQRAVFSEKFALDK 176 Query: 163 VETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN-- 220 + L V+ + ++ + + R + R S+++ + + + Sbjct: 177 EWSKLTRAVVGMLLAWPSSITVSLRHAATQRELRFRPPEKLDITSRTSRILTQAGLADSS 236 Query: 221 ----AVELNEKSNEITLQGYTG----------------IPTFNRGNANQFYVFINGRTVQ 260 V ++ I+++G IP N + Y IN Sbjct: 237 DVDAWVPISASCGPISVKGCICTNPVATRRSQFISLGIIPIINEFGTDVLYEEINRIFGN 296 Query: 261 DKFILSTIRTAYAETI---------------PLGRYPVVVLLLEIDPRQVDVNVHPAKSY 305 F + + + R+P+ L + + N P + Sbjct: 297 SSFGVVDGEEGHRGVSLKLDEFTGRELRSRKGIERWPMFYLKITASSLEGINN--PDQLG 354 Query: 306 IRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH------QDNAPKTHLPKYA 359 + + I + + + + K V + S F + PK A Sbjct: 355 SHGQTLSAILDLLKATCYGFLKKHQFRPRKVQLRPEESLFSTARTLGRSKKPKPSNSSRA 414 Query: 360 TSLTNTQEKLFLQENRLSTNDLLP 383 +S+ +T + S + Sbjct: 415 SSVASTSRSKSVSARVDSPFEGWH 438 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 73/179 (40%), Gaps = 21/179 (11%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEI-------IDLLEGECALIMEHDE 478 LV++DQHA ER E++ ++ +T + +L ++ + E +L+ +H E Sbjct: 637 LVMLDQHAVDERCQLEELMLEYFTTDPLTNQVLPQIEPLDRPIIFEVPQEEWSLLEQHRE 696 Query: 479 DLHRLGIKAE---RFGPNAIAIREIPAILSKKN--IPQLLRDIIDEIIDSSTTYTLQDRI 533 GI + + + + +P + ++ P+LL +++ S ++ Sbjct: 697 YFAAWGITYQTPPSAHRHRVVVNGLPPSIIERCRLEPRLLIELLRTEAWRSVDSSIPLVR 756 Query: 534 ------ENILATM--AC-YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + L + C G+I + + + L+ + + QC HGRP+ L Sbjct: 757 PATAAPDKPLISRFNGCPRGAIMFNDILTTQQCEELIARLSRCAFPFQCAHGRPSMAPL 815 >gi|296827616|ref|XP_002851197.1| DNA mismatch repair protein [Arthroderma otae CBS 113480] gi|238838751|gb|EEQ28413.1| DNA mismatch repair protein [Arthroderma otae CBS 113480] Length = 978 Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats. Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 15/164 (9%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 IR L +++ QI + ++ + I ELI+NSLDA +S + ++ K + DNG Sbjct: 6 PIRALPQEVAGQIRSSSVVTNLNGVILELIKNSLDARASTITVMV-DFQKGTCTVEDNGL 64 Query: 62 GMTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E + H TSK +G +G + S+ +++ +T+ SR Sbjct: 65 GIPPDEFHENGGIGKLHHTSKFYT---PSEVYGRKGVFISSLISMALVTITSRNKSFQQT 121 Query: 119 AQIAISGEKI--------SSVRPVAMNPGTIVEVRDLFFTIPAR 154 I K+ + GT V V DLF +P R Sbjct: 122 NSIIFRHSKLISRLCPAPIQHDILHPQHGTRVTVNDLFSNLPVR 165 Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 48/212 (22%) Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNS----TKITSQTLLTPEIIDLLEGECALIME 475 Q + LV+VDQHAA ER E++ + + TL TP + E L+ Sbjct: 722 QQDEEVLVLVDQHAADERCRVEELFAGLCGLSPLHVVDTVTLPTPINFRISTQEAKLLET 781 Query: 476 HDEDLHRLGIKAERF----GPNAIAIREIPAILSKKN--IPQLLRDII-DEIIDS----- 523 G E G ++ +R +P +++++ PQL D++ EI D Sbjct: 782 RSGYFAAWGCLYEVLREAEGNYSLVLRSLPTLIAERCRVEPQLAIDMLRSEIWDQTDISK 841 Query: 524 --------------------------------STTYTLQDRIENILATMACYGSIRSGRK 551 + ++ +++ + AC +I + Sbjct: 842 ASVKSVLYSAKDTDQGSAKKKCGMNEPCHYWLERIGSCPKKMVDLIISRACRSAIMFNDE 901 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + E L+ + K QC HGRP+ + + Sbjct: 902 LSIAECQNLVSRLAKCAFPFQCAHGRPSMVPI 933 >gi|326436237|gb|EGD81807.1| hypothetical protein PTSG_11884 [Salpingoeca sp. ATCC 50818] Length = 879 Score = 123 bits (309), Expect = 8e-26, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 91/214 (42%), Gaps = 25/214 (11%) Query: 395 PVEESEATHYQLGIACAQIHQNYIIS------QTTDGLVIVDQHAAHERLIFEKMRQDFN 448 + + T ++ Q+ +I + +V++DQHAAHER+ E++ + Sbjct: 626 HAQRFDNTAFRDFQVLGQVDNKFIACLFRREQEADSVIVLIDQHAAHERIRLERLEHEHF 685 Query: 449 STKITSQTLLTPE-----IIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP-- 501 + E + L EG+ + ++ + GI R GP + + +P Sbjct: 686 RLGSPVRATHVCELDAPWELSLAEGDASAAEQYATAIKAWGIHLVRTGPTCVRVTHLPGA 745 Query: 502 ----------AILSKKNIPQLLRDIIDEIIDS--STTYTLQDRIENILATMACYGSIRSG 549 ++++ + +L+ D I + + +++ +++IL T AC+G+I+ G Sbjct: 746 LVDASGTRQRLLVNQSTVEELIEDEITHVRQNQGRKRWSIPPTLQDILNTRACHGAIKFG 805 Query: 550 RKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ + +L ++ QC HGRP+ L Sbjct: 806 DELSIAQCQDILSDLASCKLPFQCAHGRPSIAPL 839 Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats. Identities = 59/276 (21%), Positives = 113/276 (40%), Gaps = 26/276 (9%) Query: 89 TFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA---MNPGTIVEVR 145 T+GFRGEAL ++ A+S LT+ +R + T I G + + GT V V Sbjct: 3 TYGFRGEALAALAAISVLTIETRKAEEPTTLCKIIKGGAVIAKGRAGSELREAGTCVTVT 62 Query: 146 DLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNF 205 DLF+ +P R + + + I + +A+ PK++ T + ++ +N S + Sbjct: 63 DLFYNLPVRRQ--RLGPADMDRIKHKMGALALMLPKLALTLTDTQTGHKHVNS-SGAVST 119 Query: 206 PERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFIL 265 ++ G D + + LN ++GY + + +VF+N R V+ F+ Sbjct: 120 RGVFGRLFGNDKSRHLISLNHIDAARVVEGYISTGVY--YAPDLQFVFVNKRPVRRCFLH 177 Query: 266 STIRTAYAETI------------------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIR 307 + + +I R+ + VL + + QVDV P KS + Sbjct: 178 QVVISQLLNSIILAEDPTTTSQGNPFKRKKRNRHAIFVLNIVLPADQVDVTHEPTKSLVS 237 Query: 308 FRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS 343 F + +R I ++++ + K + + + Sbjct: 238 FEDEHAVRELIKRAVRAFLAKHDLLVDPTPYQMTLP 273 >gi|4809339|gb|AAD30184.1|AC006530_6 hypothetical protein [Homo sapiens] Length = 391 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 21/185 (11%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S TL+ P I + E + L+ + Sbjct: 165 LVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCY 224 Query: 477 DEDLHRLG--IKAERFGPNAIAIREIPAILSKKNIPQLLR-------DIIDEIIDSSTTY 527 ++L LG + + + ++P ++ +L R I++ + + Sbjct: 225 HKNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVELLQTTGGIQ 284 Query: 528 -TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLS 586 TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP+ + L + Sbjct: 285 GTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPL--A 342 Query: 587 DIEKL 591 DI+ L Sbjct: 343 DIDHL 347 >gi|194038576|ref|XP_001926322.1| PREDICTED: DNA mismatch repair protein Mlh3-like isoform 2 [Sus scrofa] Length = 279 Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats. Identities = 47/226 (20%), Positives = 97/226 (42%), Gaps = 29/226 (12%) Query: 393 NDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-- 450 + V +E + + ++ + LV+VDQHAAHER+ E++ D Sbjct: 11 STFVAPTEDVRAACTKDLTTMAVDVLLENGGNLLVLVDQHAAHERIRLEQLIADSYEKQQ 70 Query: 451 -------KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE--RFGPNAIAIREIP 501 K+ S T+ P I + E + L+ + ++L LG++ + + ++P Sbjct: 71 AQGSGRKKLLSSTVNPPLEIPVTEEQRRLLRCYHKNLEDLGLEIIFPDTSDRLVLVGKVP 130 Query: 502 AILSKKN---------------IPQLLRDIIDEIIDSSTTY-TLQDRIENILATMACYGS 545 ++ + + +R+ ++ + + TL ++ +LA+ AC+G+ Sbjct: 131 LCFVEREANELRRGRSTVTKSIVEEFIREQVELLQTTGGIQGTLPLTVQKVLASQACHGA 190 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 I+ + E RL+ + QC HGRP+ + L +D++ L Sbjct: 191 IKFNDSLSLEESCRLIEALSWCQLPFQCAHGRPSMLPL--ADVDHL 234 >gi|14029392|gb|AAK52671.1| unknown [Magnaporthe grisea] Length = 119 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 37/76 (48%), Positives = 53/76 (69%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ LS+ ++N+IAAGEII P A+KELIEN++DA S+ +E + GG QITDNG G Sbjct: 44 IQALSQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSLEVLCRDGGLKMLQITDNGCG 103 Query: 63 MTSEEIPMAVQRHCTS 78 + E++P+ +R TS Sbjct: 104 IEKEDLPILCERFTTS 119 >gi|226291503|gb|EEH46931.1| DNA mismatch repair protein [Paracoccidioides brasiliensis Pb18] Length = 777 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 111/302 (36%), Gaps = 40/302 (13%) Query: 56 ITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNI--HTFGFRGEALPSIGA-VSHLTLMS 110 + DNG G+ + + +R CTSK+ DD N+ T GFRGEAL S + + + Sbjct: 14 VRDNGTGIHPNDRQLVCKRSCTSKLRTVDDLRNVGGSTLGFRGEALASAAEMCGGILVTT 73 Query: 111 RPPQNNTGAQIAISGEKI-SSVRPVAMNPGTIVEVRDLFFTIPA-RLNFLKSEQVETNLI 168 + + GA + + S + GT V V + +P + LK + + Sbjct: 74 KTDEELVGAALKYDRAGLLISCTKSSHPTGTTVRVSEFLKFVPVLKQTALKCASKTISRL 133 Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNE-- 226 ++ A++ P++ + + + + I +G + ++ V + Sbjct: 134 KKMLIAYALSRPEIRLSLQVLGGKNQSPWIYAPKKTISDAIMTAVGPEVVSQCVIVAWPE 193 Query: 227 ----------------KSNEITLQGYTGIP----TFNRGNANQFYVFINGRTVQ-DKFIL 265 ++N ++++ +P ++ YV I+ R + I Sbjct: 194 SQDSEASSSLGHRDDSETNPLSIRLVAVVPGPDADCSKLTRAGQYVSIDRRPMSTSHGIA 253 Query: 266 STIRTAYAETIPLGR----------YPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIR 315 I + + G P + + L+ D NV P+K+ + F + ++ Sbjct: 254 KEIVKLFKSYLRSGSLCNGGLTSPVDPFLFIHLQCPLGSYDANVEPSKNDVLFADSKLVM 313 Query: 316 NF 317 + Sbjct: 314 SL 315 >gi|312212199|emb|CBX92283.1| similar to DNA mismatch repair protein (Mlh3) [Leptosphaeria maculans] Length = 963 Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 27/188 (14%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVE--TVIAGGGKSFFQITDNG 60 I L + + Q+ + I S + EL++N+LDA+++R+E A GG + + D+G Sbjct: 35 ILPLPDDVAAQVKSSTAIVSVSHVVLELLKNALDAKATRIEAAVDFARGGCT---VEDDG 91 Query: 61 FGMTSEEIPMAVQRHC----TSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+ E RH TSK + + G G L S+ A+S LT+ S + Sbjct: 92 VGIPPIEF-----RHQGGLDTSKYA---AQEAQLGRNGTFLASLAAMSLLTITSHHKEYL 143 Query: 117 TGAQIAISGEKI-------SSVRPVAMNPGTIVEVRDLFFTIPAR---LNFLKSEQVETN 166 + I K + + V GT V VR+LF +P R + ++ E + Sbjct: 144 SHNSITFHHSKPVERQLPAPANKQVHSKHGTRVTVRNLFGNLPVRVKQRSAALDQKAEQD 203 Query: 167 LITDVIRR 174 + D ++R Sbjct: 204 RLWDALKR 211 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 61/198 (30%), Gaps = 64/198 (32%) Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQD------------------FNSTKITSQTLLTPE 461 +Q T+ LV++DQHAA ER+ E + + + + +T L P Sbjct: 754 TQATELLVLIDQHAADERIQVEDLLRGLCTPANNQTPSAGYQSKLGHKSHVTCTHLEKPV 813 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNA--------------IAIREIPAILSKK 507 + + E + GI + A +++ +P ++++ Sbjct: 814 QYTISQMERTYFTTYASRFATWGILFDLPDNTAPSASLPNKAKLPCLLSVTTLPPAIAER 873 Query: 508 NIPQ------LLRDIIDEIIDSSTTYTL--------------------------QDRIEN 535 LLR + + ++ L + + Sbjct: 874 CKSDPKLLITLLRSTVWKYVEDGHVPDLTPMPSSSSSSSTMDPKTQWPRHLSTCPPGLID 933 Query: 536 ILATMACYGSIRSGRKMQ 553 +L + AC +I ++ Sbjct: 934 MLNSRACRSAIMFNDELS 951 >gi|84579161|dbj|BAE73014.1| hypothetical protein [Macaca fascicularis] Length = 417 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 90/193 (46%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S TL+ P I + E + L+ + Sbjct: 183 LVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCY 242 Query: 477 DEDLHRLGIK--AERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 ++L LG++ + + + ++P ++ + + +R+ ++ Sbjct: 243 HKNLEDLGLELVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQVEL 302 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP Sbjct: 303 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIETLSSCQLPFQCAHGRP 362 Query: 579 TFIKLKLSDIEKL 591 + + L +DI+ L Sbjct: 363 SMLPL--ADIDHL 373 >gi|4495121|emb|CAB39214.1| hexB [Streptococcus oralis] gi|4495200|emb|CAB39252.1| hexB [Streptococcus pneumoniae] gi|4495204|emb|CAB39254.1| hexB [Streptococcus pneumoniae] gi|4495208|emb|CAB39256.1| hexB [Streptococcus pneumoniae] gi|4495212|emb|CAB39258.1| hexB [Streptococcus pneumoniae] gi|4495220|emb|CAB39262.1| hexB [Streptococcus pneumoniae] gi|4495224|emb|CAB39264.1| hexB [Streptococcus pneumoniae] gi|4495228|emb|CAB39266.1| hexB [Streptococcus pneumoniae] gi|4495232|emb|CAB39268.1| hexB [Streptococcus pneumoniae] gi|4495236|emb|CAB39270.1| hexB [Streptococcus pneumoniae] gi|4495240|emb|CAB39272.1| hexB [Streptococcus pneumoniae] gi|4495244|emb|CAB39274.1| hexB [Streptococcus pneumoniae] Length = 96 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 2/96 (2%) Query: 60 GFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + Sbjct: 1 GHGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASH 60 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 G ++ G ++ V P GT V V DLFF PA Sbjct: 61 GTKLVARGGEVEEVIPATSPVGTKVCVEDLFFNTPA 96 >gi|4495111|emb|CAB39209.1| hexB [Streptococcus mitis] Length = 96 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 2/96 (2%) Query: 60 GFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + Sbjct: 1 GHGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASH 60 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 G ++ G ++ V P GT V V DLFF PA Sbjct: 61 GTKLVARGGEVEKVIPATSPVGTKVCVEDLFFNTPA 96 >gi|322699342|gb|EFY91104.1| DNA mismatch repair protein [Metarhizium acridum CQMa 102] Length = 799 Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats. Identities = 67/422 (15%), Positives = 146/422 (34%), Gaps = 56/422 (13%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR L + ++++I + I + + L+ NSLDA S++V + + DNG Sbjct: 1 MSIRPLPKDVVDRIKSSSAITSLNQVVCGLLTNSLDACSTKVNISL-DYVLGNCTVQDNG 59 Query: 61 FGMTSEEIPM---AVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 FG+ E + H TSK N +T G G + S+ +S LT S + + Sbjct: 60 FGIEPSEFEQDGGLCKLHHTSKTP---PNPNTHGSHGSFIASVATLSLLTATSHHRHHAS 116 Query: 118 --------GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL--------KSE 161 G +A + R + GT + +R+LF ++P R+ + + Sbjct: 117 QASLSVHNGKVLARHVPALPDQRFELFSHGTRISIRNLFGSMPVRVKQRGLLFSDRVRLD 176 Query: 162 QVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVI------GE 215 + +L+ DV + +VS + R + +S N F RIS++ G Sbjct: 177 REWESLMRDVAGLLLPWPTEVSIFLREANTQREQ-RLRSGNNEFASRISRIFTQSGLAGS 235 Query: 216 DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + + V ++ + ++G + + + + + F + + + Sbjct: 236 EDAGSWVPVSASCRRVRIKGAISTNPVA--TRRSQIMSLGIQPIPNSFGTNVLYEEVNKL 293 Query: 276 I-----------------------PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPT 312 + R+P+ L + + D+ + + + Sbjct: 294 FQGSNFGVVDADEQIGGVQGKPRKGIERWPMFYLEIHLLGNDEDLAMDDVLGDSK-HSLQ 352 Query: 313 IIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ 372 I + + + K + + + + + + K + + + L+ Sbjct: 353 AIIDLLKVVCYGFLKKHFLQPKQIQRIAEVPATVRTRQSISEGQKSSPLPSAAITEPELR 412 Query: 373 EN 374 Sbjct: 413 RP 414 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 79/255 (30%), Gaps = 32/255 (12%) Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 Q+ + S + + + + + K + QE + Sbjct: 531 PQEWLQNIMRSWKNPVFELTEPRIPSLDQAVPVERPVNANYDGPCSKFYSQEYNVQFESA 590 Query: 382 LPSDDPTYSEDN-DPVEESEATHYQLGIACAQIHQNYIIS--QTTDGLVIVDQHAAHERL 438 + + S + E + + +H + + + L+++DQHAA ER Sbjct: 591 AMALNGRLSRTSLAKAEVIGQVDKKFLLLRLSLHTPNVAQGTEASSTLIMLDQHAADERC 650 Query: 439 IFEKMRQDFNSTKI---TSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA-----ERF 490 E++ + ++ L P + ++ E L+ GI Sbjct: 651 RLEELMSQYFQLNPLRAVTELLEKPIVFEVSAREYELLCRFHSHFRTWGIMYVVGKTSST 710 Query: 491 GPNAIAIREIPAILSKKN--IPQLLRDIIDEIIDSSTTYTLQDR---------------- 532 + I I+ +P + ++ P+LL D++ + T+ + Sbjct: 711 NEHQIEIKSLPPSILERCRTEPKLLIDLVRKETWKLEDRTIPSQPVYERGNPWVSSFHNC 770 Query: 533 ---IENILATMACYG 544 I +L + +C Sbjct: 771 PQGILELLHSRSCRS 785 >gi|289665668|ref|ZP_06487249.1| DNA mismatch repair protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 57 Score = 121 bits (304), Expect = 3e-25, Method: Composition-based stats. Identities = 28/57 (49%), Positives = 42/57 (73%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQIT 57 M IR+L E ++NQIAAGE++ERP+ +KEL+EN+LDA ++RV+ + GG +I Sbjct: 1 MAIRQLPEILVNQIAAGEVVERPASVVKELVENALDAGATRVDIELEEGGVRLIRIR 57 >gi|154270583|ref|XP_001536146.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150409950|gb|EDN05338.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1048 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 19/170 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 I+ L + I Q+ + I + + EL++NSLDA + V + GG + D+ Sbjct: 7 SIQPLPPEAIAQLTSSIAISHLNGVVLELLKNSLDAGAKTVSINVDFPKGGC---VVEDD 63 Query: 60 GFGMTSEEI---PMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ-N 115 G G+ E + H +SK + +G +G L S+ +++ +T+ SR + Sbjct: 64 GHGILPAEFLEGSNLAKLHHSSKFNSQHEV---YGRKGVFLASLVSLALVTITSRHESVS 120 Query: 116 NTGAQIAISGEKISSVRPVAMN-------PGTIVEVRDLFFTIPARLNFL 158 T + + IS + P + GT V V DLF +P R+ Sbjct: 121 TTNTVMYHHAKAISILMPAPLQHEINSPDHGTRVTVTDLFGNLPVRVKHR 170 Score = 100 bits (250), Expect = 6e-19, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 72/223 (32%), Gaps = 62/223 (27%) Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNS-------------TKITSQTLLTPEIIDLLEGE 469 LV+VDQHAA ER E++ + ++ + +L P + E Sbjct: 717 QQNLVLVDQHAADERCRVEQLFDELCGTTTATPDSSSFCRGRVNTASLPKPISFQVSPQE 776 Query: 470 CALIMEHDEDLHRLGIKAERFGP----NAIAIREIPAILSKKN--IPQLLRDIID-EIID 522 L+ H G + + + ++PA+++++ PQL D++ EI D Sbjct: 777 GELLKSHSGYFESWGCYYSLSNSERNYHTVTVDKLPALIAERCRLEPQLAIDLLRGEIWD 836 Query: 523 SST------------------------------------------TYTLQDRIENILATM 540 I ++L + Sbjct: 837 RKDHGRRDETSFSQTLSSGNPEAGNSENSQGEAPPTIARQSWLERISDCPKAIVDLLNSR 896 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 AC SI + E L+ ++ QC HGRP+ I + Sbjct: 897 ACRSSIMFNDILSPAECQNLISKLALCAFPFQCAHGRPSMIPI 939 >gi|194038578|ref|XP_001926265.1| PREDICTED: DNA mismatch repair protein Mlh3-like isoform 1 [Sus scrofa] Length = 244 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S T+ P I + E + L+ + Sbjct: 9 LVLVDQHAAHERIRLEQLIADSYEKQQAQGSGRKKLLSSTVNPPLEIPVTEEQRRLLRCY 68 Query: 477 DEDLHRLGIKAE--RFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 ++L LG++ + + ++P ++ + + +R+ ++ Sbjct: 69 HKNLEDLGLEIIFPDTSDRLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQVEL 128 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP Sbjct: 129 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDSLSLEESCRLIEALSWCQLPFQCAHGRP 188 Query: 579 TFIKLKLSDIEKL 591 + + L +D++ L Sbjct: 189 SMLPL--ADVDHL 199 >gi|332867644|ref|XP_003318712.1| PREDICTED: postmeiotic segregation increased 4-like protein-like, partial [Pan troglodytes] Length = 185 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 4/138 (2%) Query: 45 VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGA 102 + G +++ NG G+ E+ +H TSKI + D + TFGFRGEAL S+ A Sbjct: 2 KLKDYGVDLIEVSGNGCGVEEEKFEGLTLKHHTSKIQEFADVPQVETFGFRGEALSSLCA 61 Query: 103 VSHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKS 160 +S +T+ + G ++ + KI P GT V V+ LF T+P R F ++ Sbjct: 62 LSDVTISTCHVSAKVGTRLVFDHDGKIIQKTPYPHPRGTTVSVKQLFSTLPVRHKEFQRN 121 Query: 161 EQVETNLITDVIRRMAIA 178 + + R Sbjct: 122 IKKKRACFPFAFCRDCQF 139 >gi|332865552|ref|XP_003318556.1| PREDICTED: postmeiotic segregation increased 4-like protein-like [Pan troglodytes] Length = 209 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 4/138 (2%) Query: 45 VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGA 102 + G +++ NG G+ E+ +H TSKI + D + TFGFRGEAL S+ A Sbjct: 57 KLKDYGVDLIEVSGNGCGVEEEKFEGLTLKHHTSKIQEFADVPQVETFGFRGEALSSLCA 116 Query: 103 VSHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKS 160 +S +T+ + G ++ + KI P GT V V+ LF T+P R F ++ Sbjct: 117 LSDVTISTCHVSAKVGTRLVFDHDGKIIQKTPYPHPRGTTVSVKQLFSTLPVRHKEFQRN 176 Query: 161 EQVETNLITDVIRRMAIA 178 + + R Sbjct: 177 IKKKRACFPFAFCRDCQF 194 >gi|73963651|ref|XP_868114.1| PREDICTED: similar to DNA mismatch repair protein Mlh3 (MutL protein homolog 3) isoform 2 [Canis familiaris] Length = 391 Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats. Identities = 56/290 (19%), Positives = 119/290 (41%), Gaps = 28/290 (9%) Query: 323 QKAINKKGISTSSVLSKKMISSFHQDNAPK--THLPKYATSLTNTQEKLFLQENRLSTND 380 + + + + + K+ + S + P+ A +++ Q K + + ++ Sbjct: 64 RTMMRQNRDTVDDTVGKESLQSLFSEWENPVFARYPEVAVDVSSGQAKSLV----VKIHN 119 Query: 381 LLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIF 440 +L T + + + + + LV+VDQHAAHER+ Sbjct: 120 VLYPYRFTKEMIHSM-QVLQQVDNKFIACLMSTKTEENGEAGGNLLVLVDQHAAHERVRL 178 Query: 441 EKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA--ER 489 E++ D K+ S T+ P I + E + L+ + ++L LG++ Sbjct: 179 EQLITDSYEKQQPQGSGRKKLLSSTVSPPLKIRVTEEQRRLLRCYHKNLEDLGLEILFPD 238 Query: 490 FGPNAIAIREIPAILSKKNIPQL-------LRDIIDEIIDSSTT-YTLQDRIENILATMA 541 + + + ++P ++ +L R+I++ + + TL ++ +LA+ A Sbjct: 239 TNDSLVLVGKVPLCFIEREANELRRGRSPVTRNIVELLQTTGGIQRTLPLTVQKVLASQA 298 Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 C+G+I+ + E RL+ + QC HGRP+ + L +DI+ L Sbjct: 299 CHGAIKFNDGLSREESCRLIEALSWCQLPFQCAHGRPSMLPL--ADIDHL 346 >gi|887372|gb|AAC42005.1| ORF; putative [Homo sapiens] Length = 265 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+V QHAAHER E+ D K+ S TL+ P I + E + L+ + Sbjct: 31 LVLVXQHAAHERXRLEQXIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCY 90 Query: 477 DEDLHRLG--IKAERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 ++L LG + + + ++P ++ + + +R+ ++ Sbjct: 91 HKNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLEL 150 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGRP Sbjct: 151 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRP 210 Query: 579 TFIKLKLSDIEKL 591 + + L +DI+ L Sbjct: 211 SMLPL--ADIDHL 221 >gi|74194034|dbj|BAE36933.1| unnamed protein product [Mus musculus] Length = 997 Score = 120 bits (301), Expect = 6e-25, Method: Composition-based stats. Identities = 46/193 (23%), Positives = 91/193 (47%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S T++ I + E + L+ + Sbjct: 767 LVLVDQHAAHERIRLEQLITDSYEKQDPQSAGRKKLLSSTIIPQLAITVSEEQRRLLRSY 826 Query: 477 DEDLHRLGIK--AERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 + L LG++ + I + ++P ++ + +L+R+ ++ Sbjct: 827 HKHLEDLGLELLFPDASDSLILVGKVPLCFVEREASELRRGRSTVTKSIVEELIREQVEL 886 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ ++ E RL+ + + QC HGRP Sbjct: 887 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDRLSLEESCRLIEALSLSQLPFQCAHGRP 946 Query: 579 TFIKLKLSDIEKL 591 + + L +D++ L Sbjct: 947 SMLPL--ADLDHL 957 >gi|26325724|dbj|BAC26616.1| unnamed protein product [Mus musculus] Length = 934 Score = 120 bits (301), Expect = 7e-25, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 92/193 (47%), Gaps = 29/193 (15%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNST---------KITSQTLLTPEIIDLLEGECALIMEH 476 LV+VDQHAAHER+ E++ D K+ S T++ P I + E + L+ + Sbjct: 704 LVLVDQHAAHERIRLEQLITDSYEKQDPQSAGRKKLLSSTIIPPLAITVSEEQRRLLRSY 763 Query: 477 DEDLHRLGIK--AERFGPNAIAIREIPAILSKKN---------------IPQLLRDIIDE 519 + L LG++ + I + ++P ++ + +L+R+ ++ Sbjct: 764 HKHLEDLGLELLFPDASDSLILVGKVPLCFVEREASELRRGRSTVTKSIVEELIREQVEL 823 Query: 520 IIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + + TL ++ +LA+ AC+G+I+ ++ E RL+ + + QC HGRP Sbjct: 824 LQTTGGIQGTLPLTVQKVLASQACHGAIKFNDRLSLEESCRLIEALSLSQLPFQCAHGRP 883 Query: 579 TFIKLKLSDIEKL 591 + + L +D++ L Sbjct: 884 SMLPL--ADLDHL 894 >gi|159108558|ref|XP_001704549.1| Mlh2-like protein [Giardia lamblia ATCC 50803] gi|33667828|gb|AAQ24514.1| Mlh2 [Giardia intestinalis] gi|157432615|gb|EDO76875.1| Mlh2-like protein [Giardia lamblia ATCC 50803] Length = 1474 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 53/241 (21%), Positives = 98/241 (40%), Gaps = 21/241 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I++LS I ++ + + P+ +KELIENSLDA ++ V+ + G + DNG G Sbjct: 18 IKRLSPLDIIRLNSLDCANSPADVVKELIENSLDAGATVVKVFYSYYGYREIAVYDNGLG 77 Query: 63 MT--SEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 ++ + + +CTSKI D+ ++ T+GFRG AL I L + SR + Sbjct: 78 ISGYDDSFEVIANSNCTSKIRIYDEIFSVRTYGFRGNALMWISLKGELQIFSRGSDDAKV 137 Query: 119 AQIAISGEKISSVRPVAMNPG----------TIVEVRDLFFTI------PARLNFLKSEQ 162 + + S+ + T ++V F + +R S Sbjct: 138 MRAIYVNGGLFSIVSIRTEDEEYVLRSFVGHTTIDVSGRFTIMVVSNFGDSRRETEMSPS 197 Query: 163 VETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAV 222 + + + D ++R AI + F + + +R+ + + F + V Sbjct: 198 TQRSELEDTVKRYAIPHYDKEFLLY-DTDMNIPILALEKRPSIYDRLFDIRRDIFTSGHV 256 Query: 223 E 223 E Sbjct: 257 E 257 >gi|4495216|emb|CAB39260.1| hexB [Streptococcus pneumoniae] Length = 96 Score = 120 bits (300), Expect = 9e-25, Method: Composition-based stats. Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 2/96 (2%) Query: 60 GFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + Sbjct: 1 GYGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASH 60 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 G ++ G ++ V P GT V V DLFF PA Sbjct: 61 GTKLVARGGEVEEVIPATSPVGTKVCVEDLFFNTPA 96 >gi|6900980|emb|CAB71560.1| DNA mismatch repair protein [Streptococcus mitis] gi|6901220|emb|CAB71675.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901359|emb|CAB71741.1| DNA mismatch repair protein [Streptococcus sp.] gi|6901361|emb|CAB71742.1| DNA mismatch repair protein [Streptococcus sp.] gi|6901365|emb|CAB71744.1| DNA mismatch repair protein [Streptococcus sp.] gi|6901367|emb|CAB71745.1| DNA mismatch repair protein [Streptococcus sp.] gi|6901369|emb|CAB71746.1| DNA mismatch repair protein [Streptococcus sp.] Length = 95 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVEGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V V DLFF PA Sbjct: 61 TKLVARGGEVEEVIPATSPVGTKVCVEDLFFNTPA 95 >gi|6901046|emb|CAB71620.1| DNA mismatch repair protein [Streptococcus oralis] Length = 95 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 42/95 (44%), Positives = 57/95 (60%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+T +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGITHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V V DLFF PA Sbjct: 61 TKLVARGGEVEEVIPATSPVGTKVCVEDLFFNTPA 95 >gi|302652496|ref|XP_003018097.1| DNA mismatch repair protein (Mlh3), putative [Trichophyton verrucosum HKI 0517] gi|291181704|gb|EFE37452.1| DNA mismatch repair protein (Mlh3), putative [Trichophyton verrucosum HKI 0517] Length = 1000 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 15/163 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + QI + I+ + I ELI+NSLDA +S V + K + D+G G Sbjct: 8 IRMLPQDVAGQIRSSSIVTSLNSVIVELIKNSLDANASAVTVNV-DFQKGTCTVEDDGIG 66 Query: 63 MTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 + E + H TSK +G +G + S+ +++ +T+ SR Sbjct: 67 IPPNEFHENGGLGKLHHTSKFYT---TGQVYGRKGIFISSLISMALVTITSRNISFQETN 123 Query: 120 QIAISGEKI--------SSVRPVAMNPGTIVEVRDLFFTIPAR 154 + K+ + GT V V DLF +P R Sbjct: 124 SVIFRHSKLISRLCPAPIQHDLLHPQHGTRVAVNDLFSNLPVR 166 Score = 106 bits (265), Expect = 1e-20, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 71/210 (33%), Gaps = 46/210 (21%) Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFNS----TKITSQTLLTPEIIDLLEGECALIME 475 + + LV+VDQHAA ER E++ S + + L TP + E L Sbjct: 732 REGEEVLVLVDQHAADERCRVEELFAALCSLSPSGNVDTTNLPTPISFRIPAQEARLFEA 791 Query: 476 HDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKN--IPQLLRDIIDEIIDSSTTYTL 529 G E G ++ +R +P +++++ P+L D++ I T + Sbjct: 792 RSGYFSSWGCLYQVLREAEGYYSLVVRGLPTLITERCRVEPRLAIDMLRSEIWDPTEISK 851 Query: 530 QDRIE------------------------------------NILATMACYGSIRSGRKMQ 553 +++ + +C +I + Sbjct: 852 PSIRSALEGCGSQGFAEKGFGMTETHHCWLQRIGGCPKKMVDLIVSRSCRSAIMFNDVLS 911 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 E L+ + K QC HGRP+ + + Sbjct: 912 VSECQSLVSRLAKCAFPFQCAHGRPSMVPI 941 >gi|6901357|emb|CAB71740.1| DNA mismatch repair protein [Streptococcus sp.] Length = 95 Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats. Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSILTLLTAVEEASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ + P GT V V DLFF PA Sbjct: 61 TKLVARGGEVEEIIPATSPVGTKVCVEDLFFNTPA 95 >gi|6900964|emb|CAB71552.1| DNA mismatch repair protein [Streptococcus mitis] Length = 95 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V V DLFF PA Sbjct: 61 TKLVARGGQVEEVIPATSPVGTKVCVEDLFFNTPA 95 >gi|6900978|emb|CAB71559.1| DNA mismatch repair protein [Streptococcus mitis] gi|6901118|emb|CAB71623.1| DNA mismatch repair protein [Streptococcus oralis] gi|6901351|emb|CAB71737.1| DNA mismatch repair protein [Streptococcus sp.] Length = 95 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ + P GT V V DLFF PA Sbjct: 61 TKLVARGGEVEEIIPATSPVGTKVCVEDLFFNTPA 95 >gi|56675836|emb|CAB71738.2| DNA mismatch repair protein [Streptococcus sp.] Length = 116 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V V DLFF PA Sbjct: 61 TKLVARGGEVEEVIPATSPVGTKVCVEDLFFNTPA 95 >gi|6901040|emb|CAB71617.1| DNA mismatch repair protein [Streptococcus oralis] gi|6901044|emb|CAB71619.1| DNA mismatch repair protein [Streptococcus oralis] gi|6901355|emb|CAB71739.1| DNA mismatch repair protein [Streptococcus sp.] Length = 95 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V V DLFF PA Sbjct: 61 TKLVARGGEVEKVIPATSPVGTKVCVEDLFFNTPA 95 >gi|6900966|emb|CAB71553.1| DNA mismatch repair protein [Streptococcus mitis] gi|6900970|emb|CAB71555.1| DNA mismatch repair protein [Streptococcus mitis] gi|6900972|emb|CAB71556.1| DNA mismatch repair protein [Streptococcus mitis] gi|6900976|emb|CAB71558.1| DNA mismatch repair protein [Streptococcus mitis] gi|6901034|emb|CAB71614.1| DNA mismatch repair protein [Streptococcus oralis] gi|6901036|emb|CAB71615.1| DNA mismatch repair protein [Streptococcus oralis] gi|6901038|emb|CAB71616.1| DNA mismatch repair protein [Streptococcus oralis] gi|6901114|emb|CAB71621.1| DNA mismatch repair protein [Streptococcus oralis] gi|6901116|emb|CAB71622.1| DNA mismatch repair protein [Streptococcus oralis] gi|6901214|emb|CAB71672.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901216|emb|CAB71673.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901218|emb|CAB71674.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901222|emb|CAB71676.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901246|emb|CAB71678.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901248|emb|CAB71679.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901250|emb|CAB71680.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901252|emb|CAB71681.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901363|emb|CAB71743.1| DNA mismatch repair protein [Streptococcus sp.] Length = 95 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V V DLFF PA Sbjct: 61 TKLVARGGEVEEVIPATSPVGTKVCVEDLFFNTPA 95 >gi|6901244|emb|CAB71677.1| DNA mismatch repair protein [Streptococcus pneumoniae] Length = 95 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V V DLFF PA Sbjct: 61 TKLVARGGEVEEVVPATSPVGTKVCVEDLFFNTPA 95 >gi|6900982|emb|CAB71561.1| DNA mismatch repair protein [Streptococcus mitis] Length = 95 Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVEGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V V DLFF PA Sbjct: 61 TKLVARGGEVEEVIPATNPVGTKVCVEDLFFNTPA 95 >gi|171466331|gb|ACB46382.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 15/183 (8%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + + R TSKI D +I +FGFRGEAL S Sbjct: 1 IRLFVSSNCYDLLMVCDTGHGIERTDYSLLCHRFATSKIETFSDIYSIQSFGFRGEALSS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ + I + + + TI+ V DL Sbjct: 61 ISYVSRMIVVSKTKNQPAYVTVYIDGKLHFDPKTLTSEHTDFFISTLKADSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPE 207 F+ P R N ++S + +L +++ ++ A P ++ S I + + + N + Sbjct: 121 FYAEPIRRNQIRSSKTSLDL-QELLISISAANPTREYSISFIDNPQAIQREIQSWLNDTQ 179 Query: 208 RIS 210 IS Sbjct: 180 HIS 182 >gi|6900988|emb|CAB71564.1| DNA mismatch repair protein [Streptococcus mitis] Length = 95 Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAMDGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V V DLFF PA Sbjct: 61 TKLVARGGEVEEVIPATSPVGTKVCVEDLFFNTPA 95 >gi|6901210|emb|CAB71670.1| DNA mismatch repair protein [Streptococcus pneumoniae] Length = 95 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAMDGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P + GT V V DLFF PA Sbjct: 61 TKLVARGGEVEEVIPATSSVGTKVCVEDLFFNTPA 95 >gi|171466313|gb|ACB46375.1| Mlh1 [Giardia intestinalis] gi|171466321|gb|ACB46378.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 15/183 (8%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + + R TSKI D +I +FGFRGEAL S Sbjct: 1 IRLFVSSNCYDLLMVCDTGHGIERTDYSLLCHRFATSKIETFSDIYSIQSFGFRGEALSS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ + I + + + TI+ V DL Sbjct: 61 ISYVSRMIVVSKTKNQPAYVAVYIDGKLHFDPKTLTSEHTDFFISTLKADSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPE 207 F+ P R N ++S + +L +++ ++ A P ++ S I + + + N + Sbjct: 121 FYAEPIRRNQIRSSKTSLDL-QELLISISAANPTREYSISFIDNPQAIQREIQSWLNDTQ 179 Query: 208 RIS 210 IS Sbjct: 180 HIS 182 >gi|330886598|gb|EGH20259.1| DNA mismatch repair protein [Pseudomonas syringae pv. mori str. 301020] Length = 75 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 34/73 (46%), Positives = 51/73 (69%) Query: 522 DSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFI 581 + T+ +Q + +L TMAC+G+IR+ R++ EMN LLR+ME S QCNHGRPT+ Sbjct: 1 EYGTSDRVQAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTERSGQCNHGRPTWT 60 Query: 582 KLKLSDIEKLFGR 594 ++ L+D++KLF R Sbjct: 61 QMGLNDLDKLFLR 73 >gi|6900968|emb|CAB71554.1| DNA mismatch repair protein [Streptococcus mitis] Length = 95 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V V DLFF PA Sbjct: 61 TKLVARGGEVEEVIPATNPVGTKVCVEDLFFNTPA 95 >gi|6900974|emb|CAB71557.1| DNA mismatch repair protein [Streptococcus mitis] Length = 95 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V V DLFF PA Sbjct: 61 TKLVARGGEVEEVVPATNPVGTKVCVEDLFFNTPA 95 >gi|6901349|emb|CAB71736.1| DNA mismatch repair protein [Streptococcus sp.] Length = 95 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDSASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ + P GT V V DLFF PA Sbjct: 61 TKLVARGGEVEEIIPATSPVGTKVCVEDLFFNTPA 95 >gi|6901120|emb|CAB71624.1| DNA mismatch repair protein [Streptococcus oralis] Length = 95 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V V DLFF PA Sbjct: 61 TKLIARGGEVEEVIPATSPVGTKVCVEDLFFNTPA 95 >gi|332867653|ref|XP_003318715.1| PREDICTED: postmeiotic segregation increased 4-like protein-like [Pan troglodytes] Length = 247 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 4/138 (2%) Query: 45 VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGA 102 + G +++ NG+G+ E+ +H TSKI + D + TFGFRGEAL S+ A Sbjct: 64 KLKDYGVDLIEVSGNGYGVEEEKFEGLTLKHHTSKIQEFADVPQVETFGFRGEALSSLCA 123 Query: 103 VSHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKS 160 +S +T+ + G ++ + KI P GT V V+ LF T+P R F ++ Sbjct: 124 LSDVTISTCHVSAKVGTRLVFDHDGKIIQKTPYPHPRGTTVSVKQLFSTLPVRHKEFQRN 183 Query: 161 EQVETNLITDVIRRMAIA 178 + + R Sbjct: 184 IKKKRACFPFAFCRDCQF 201 >gi|332862599|ref|XP_003317948.1| PREDICTED: postmeiotic segregation increased 4-like protein-like, partial [Pan troglodytes] Length = 209 Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 4/138 (2%) Query: 45 VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGA 102 + G +++ NG+G+ E+ +H TSKI + D + TFGFRGEAL S+ A Sbjct: 57 KLKDYGVDLIEVSGNGYGVEEEKFEGLTLKHHTSKIQEFADVPQVETFGFRGEALSSLCA 116 Query: 103 VSHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKS 160 +S +T+ + G ++ + KI P GT V V+ LF T+P R F ++ Sbjct: 117 LSDVTISTCHVSAKVGTRLVFDHDGKIIQKTPYPHPRGTTVSVKQLFSTLPVRHKEFQRN 176 Query: 161 EQVETNLITDVIRRMAIA 178 + + R Sbjct: 177 IKKKRACFPFAFCRDCQF 194 >gi|171466317|gb|ACB46377.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 75/183 (40%), Gaps = 15/183 (8%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + + R TSKI D +I +FGFRGEAL S Sbjct: 1 IRLFVSSNCYDLLMVCDTGHGIERTDYSLLCHRFATSKIETFSDIYSIQSFGFRGEALSS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ + I + + + TI+ V DL Sbjct: 61 ISYVSRMIVVSKTKNQPAYVAVYIDGKLHFGPKTLTSEHTDFFISTLKADSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPE 207 F+ P R N ++S + +L ++ ++ A P ++ S I + + + N + Sbjct: 121 FYAEPIRRNQIRSSKTSLDL-QKLLISISAANPTREYSISFIDNPQAIQREIQSWLNDTQ 179 Query: 208 RIS 210 IS Sbjct: 180 HIS 182 >gi|266618994|ref|ZP_06111929.1| hypothetical protein CBB_2035 [Clostridium botulinum Bf] gi|263529158|gb|EEZ28464.1| hypothetical protein CBB_2035 [Clostridium botulinum Bf] Length = 68 Score = 117 bits (294), Expect = 5e-24, Method: Composition-based stats. Identities = 27/59 (45%), Positives = 38/59 (64%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 KI L + N+IAAGE+IERP +KEL+ENS+DA + + I GG+ +I D+G Sbjct: 3 KINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDG 61 >gi|119501232|ref|XP_001267373.1| DNA mismatch repair protein (Mlh3), putative [Neosartorya fischeri NRRL 181] gi|119415538|gb|EAW25476.1| DNA mismatch repair protein (Mlh3), putative [Neosartorya fischeri NRRL 181] Length = 926 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 79/533 (14%), Positives = 163/533 (30%), Gaps = 76/533 (14%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 +I LS +++ +I + I + + EL++N+LDA + V + GG + D+ Sbjct: 7 RIEPLSPEVVAKIKSSTSITDLNRVVVELVKNALDANAHTVSVTVDFHRGGC---VVEDD 63 Query: 60 GFGMTSEEIPM---AVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ E + H TSK++ +G RG L S+ ++S LT++S ++N Sbjct: 64 GDGIPPAEFESDGGLGKAHHTSKLNS---ARAVYGRRGLFLASLASLSLLTVISHHVRHN 120 Query: 117 TGAQIAISGEK--------ISSVRPVAMNPGTIVEVRDLFFTIPAR---LNFLKSEQVET 165 + + SS + + GT V V DLF +P R + E Sbjct: 121 STNSVIFHHSTPIARLIPAPSSHHLSSSSHGTRVTVNDLFGNMPVRVKSRALALQKPDEF 180 Query: 166 NLITDVIRR------MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFIN 219 D +RR +A + + K + + + + + Sbjct: 181 ERQWDDLRRLLVSLILASDHLTKLVVSTAGKERKLMIRSHAGRQEIRGDLDIKRITSILT 240 Query: 220 NAVELNEKSNEITLQGYTGIPTFNRGNA---------------------------NQFYV 252 A + ++ +P + A + Y Sbjct: 241 QAGLIESPNSGSWNSVSASVPGISLRAAVSLVPSPTRKVQFISIGIDPVYPRNSTDLLYS 300 Query: 253 FINGRTVQDKFILSTIRTAYAETIP--------LGRYPVVVLLLEIDPRQVDVNVHPAKS 304 IN F ++ P + ++P+ + +++D Sbjct: 301 EINRLFALSDFGAVEAAPVSSDGNPGPNFTSKAVNKWPMFYICIDVDDPTELYQED---H 357 Query: 305 YIRFRNPTIIRNFI---IQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 + + ++ I I + + + G+ + K S F +P +A S Sbjct: 358 EVVPESNQSVQRLIDVLAAMISEFLKQHGLRPRAGRQTKGASRFASVESPGAGRSNFAKS 417 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 +++ +E L PT + + + Sbjct: 418 VSSQDRSSIAEEALAGQLKLPTFQRPTSTNTTSDFATWSRVKCAREPPAGKH-------E 470 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 DG A E E + + ++ L D + + ++ Sbjct: 471 LADGWKKAHSRPASEYRDRESLSLCLETDDSSAGNNLEITENDGSDADASIPW 523 Score = 103 bits (258), Expect = 6e-20, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 86/224 (38%), Gaps = 50/224 (22%) Query: 410 CAQIHQNYIISQTTDG------LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT--PE 461 AQ+ + +I+++ DG LV++DQHAA ER E + D + + P Sbjct: 659 IAQVDRKFILAKLADGHSSRSVLVLIDQHAADERCRIESLFGDMFADGHRQVQTIRIDPI 718 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAERFGPNA-----IAIREIPAILSKKN--IPQLLR 514 ++ E L +H + G+ ++ + + +PA+++++ P L+ Sbjct: 719 TFEIPLMEATLFGKHADSFASWGVGYAVERKSSARAALVVVHSLPALIAERCRLEPDLVS 778 Query: 515 DII-----------------------------DEIIDSSTTYTLQDR------IENILAT 539 D+I DE+ + ++ I ++L + Sbjct: 779 DLIRGEIWKHEENGRGALALSDQRTQRSKIHRDELGVETEDNWVERLKSCPQGIIDLLNS 838 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 AC +I + + E L+ + + QC HGRP+ + + Sbjct: 839 RACRTAIMFNDMLTAEECKSLIGRLARCVLPFQCAHGRPSMVPI 882 >gi|6901254|emb|CAB71682.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901371|emb|CAB71747.1| DNA mismatch repair protein [Streptococcus sp.] Length = 95 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 2/94 (2%) Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 2 GIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGT 61 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V V DLFF PA Sbjct: 62 KLVARGGEVEEVIPATSPVGTKVCVEDLFFNTPA 95 >gi|6901212|emb|CAB71671.1| DNA mismatch repair protein [Streptococcus pneumoniae] Length = 95 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 2/94 (2%) Query: 62 GMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 2 GIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHGT 61 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V V DLFF PA Sbjct: 62 KLVARGGEVEEVIPATSPVGTKVCVEDLFFNTPA 95 >gi|242765929|ref|XP_002341073.1| DNA mismatch repair protein (Mlh3), putative [Talaromyces stipitatus ATCC 10500] gi|218724269|gb|EED23686.1| DNA mismatch repair protein (Mlh3), putative [Talaromyces stipitatus ATCC 10500] Length = 943 Score = 117 bits (293), Expect = 5e-24, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 19/171 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESS--RVETVIAGGGKSFFQITDN 59 I L ++ ++ + I + + EL++N+LDA + + GG + D+ Sbjct: 7 PILPLPPEVAKKVQSSLKITNLNAVVVELVKNALDAGAGSLSIVVDYKRGGC---IVEDD 63 Query: 60 GFGMTSEEI---PMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+G+ +EE + H TSK ++++ RG+ L ++ +S LT+ SR ++ Sbjct: 64 GYGLPAEEFMDGAGLCRPHHTSKAGR--QSVYSC--RGQFLAALATMSLLTISSRHRGHS 119 Query: 117 TGAQIAISGEKI-------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 + K+ + + V GT V V +LF +P R+ S Sbjct: 120 ETNTVIFHESKVISRLVPAPTHQEVRGAQGTRVTVNNLFSNMPVRVKHRAS 170 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 103/315 (32%), Gaps = 49/315 (15%) Query: 318 IIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLS 377 I +S + + ++++ S F P + S ++Q + S Sbjct: 585 IRRSQTAPVQGQSAWFENLVNNWSNSVFSCPKKPIMSIEAENASDNSSQCNDAQRGPIQS 644 Query: 378 TNDLL------PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 N + + + ++ + + +++ + LV+VDQ Sbjct: 645 WNPAEALGADGHTGKVSREGLSRAAIIAQVDCKFILVRMVPAREHHSDETSNQILVLVDQ 704 Query: 432 HAAHERLIFEKMRQDFNSTK-------ITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 HAA ER E + D + + I +Q+ TP + + E + + + G Sbjct: 705 HAADERRRLEDLLSDMFTVEEQSGVISIRTQSFQTPIQCPIQDDEVSSLAAYSRYFESWG 764 Query: 485 IKAERFGP-------NAIAIREIPAILSKKN--IPQLLRDIIDEIIDSSTTYTLQDRIE- 534 + + + I +P I++++ P+L ++ + I S + Sbjct: 765 CHYKMLQELIHGRRRHLVVIEALPLIIAERCRLEPKLFIQLLRKEIWSRAGEKIPPLRRC 824 Query: 535 --------------------------NILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 +++ + AC SI + E L+ + K Sbjct: 825 VASTTEPENGPFPWLRWIAGCPEGMLDLINSRACRSSIMFNDPLSIDECQSLISRLSKCA 884 Query: 569 NSSQCNHGRPTFIKL 583 QC HGRPT I + Sbjct: 885 FPFQCAHGRPTMIPI 899 >gi|308162663|gb|EFO65047.1| Mlh2-like protein [Giardia lamblia P15] Length = 1474 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 100/245 (40%), Gaps = 27/245 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +IR+LS I ++ + + P+ +KELIENSLDA ++ V+ + G + DNG Sbjct: 17 RIRRLSPLDIIRLNSLDCANSPADVVKELIENSLDAGATVVKVFYSYYGYREIAVYDNGS 76 Query: 62 GMT-SEE-IPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G++ ++ + +CTSKI D+ + T+GFRG AL I L + SR ++ Sbjct: 77 GISNRDDSFEVIANSNCTSKIRIYDEIFSARTYGFRGNALMWISLKGELQIFSRGSEDAQ 136 Query: 118 GAQIAISGEKISSVRPVAMN-------------------PGTIVEVRDLFFTIPARLNFL 158 + + S+ + TI+ V + ++ F Sbjct: 137 VMRAIYVNGGLFSIVSIRTEDEEYVLRSFVGHTNIDVSGRFTIMVVSNFGDSLHEIEMFP 196 Query: 159 KSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFI 218 +++ E D ++R AI + F + + +R+ V + F Sbjct: 197 SAQRSELE---DTVKRYAIPHYDKEFLLY-DTDMNIPILTLEERPSIYDRLFDVRRDIFT 252 Query: 219 NNAVE 223 + VE Sbjct: 253 SGYVE 257 >gi|71277427|gb|AAZ29878.1| non-ribosomal peptide synthetase modules and related protein [Pseudomonas aeruginosa] Length = 169 Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats. Identities = 47/168 (27%), Positives = 83/168 (49%) Query: 168 ITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK 227 I +V+RR+A+A V+ T + + R+ + G F+ +A+ ++ + Sbjct: 1 IDEVVRRIALARFDVAITLHHNGKLIRQYRAAPDESQYERRLGNICGATFLQHALAVSWQ 60 Query: 228 SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLL 287 ++T+ G+ P + + Y ++N R ++D+ I IR AY + + + P VL Sbjct: 61 HGDLTIHGWVADPVGAKQLPDMQYCYVNQRMMRDRLINHAIRQAYQDQLSDDQQPAYVLY 120 Query: 288 LEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS 335 LEIDP QVDVNVHP K +RF ++ +FI Q++ + S Sbjct: 121 LEIDPHQVDVNVHPTKHEVRFHQARLVHDFIYQAVMSVWQQASAPVES 168 >gi|6901042|emb|CAB71618.1| DNA mismatch repair protein [Streptococcus oralis] Length = 95 Score = 117 bits (292), Expect = 8e-24, Method: Composition-based stats. Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + D I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADLFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V DLFF PA Sbjct: 61 TKLVARGGEVEEVIPATSPVGTKVCAEDLFFNTPA 95 >gi|320594203|gb|EFX06606.1| vacuolar protein sorting protein [Grosmannia clavigera kw1407] Length = 1565 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 73/431 (16%), Positives = 145/431 (33%), Gaps = 67/431 (15%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++L ++ QI A I+ + + L+ N+LDA +S V + + D+G Sbjct: 1 MAIQRLPGDVVVQIEASLIVTSLNGTVCGLLCNALDAGASNVNISV-HYSHGSCVVEDDG 59 Query: 61 FGMTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+ Q H TSK +I G G L S+ ++S L+++SR + Sbjct: 60 IGIPPPAFRPDGGLGQLHHTSKHP---RSICLHGRHGSFLASVASLSLLSVVSRCRGRAS 116 Query: 118 --------GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLK-SEQVETNLI 168 + GT V V DLF +P RL+ S + Sbjct: 117 PSALTMHNATVLRRHVPAPPEQHACPAPHGTRVAVHDLFGCMPVRLHLRPASAFAAWSRD 176 Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERI------------------- 209 D + R A + + R + + +G P Sbjct: 177 WDELVRSVTA---LLLAWPHDLVVRLRAESGTGHGRLPAVTLRAAAPPAAEHPAIARTTT 233 Query: 210 ----SQVIGEDFINNAVELNEKSNEITLQGYTGI----------------PTFNRGNANQ 249 + + + V + IT+ G + P R +A+ Sbjct: 234 LLAQAGLCDTASAASWVRVGSSIPGITVSGCVCLTPSASKRVQFIRIGVEPLSERHHADL 293 Query: 250 FYVFINGRTVQD-KFILSTIRTAYAETIPLGRYPVVVLLLEID---PRQVDVNVHPAKSY 305 Y IN +++ ++ A + R+P+ ++ +++ P +VD + + Sbjct: 294 LYDEINKLFADSLFALVAAVQRPTAARRGVDRWPMFIIGIDLTESAPVEVDDVLDDRR-- 351 Query: 306 IRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNT 365 ++ ++R+ + I + + K + + L + SS + K T+ Sbjct: 352 ---QHLALVRSLLRTMIVQFLKKHNLYRRTTLLCEDTSSVGSPSITGPPAKKRKTTRMLQ 408 Query: 366 QEKLFLQENRL 376 + F ++ Sbjct: 409 RHSPFRSWPKV 419 >gi|6900984|emb|CAB71562.1| DNA mismatch repair protein [Streptococcus mitis] gi|6900986|emb|CAB71563.1| DNA mismatch repair protein [Streptococcus mitis] Length = 95 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 42/95 (44%), Positives = 57/95 (60%), Gaps = 2/95 (2%) Query: 61 FGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G+ +E+ +A++RH TSKI + DF I T GFRGEALPSI +VS LTL++ + G Sbjct: 1 HGIAHDEVELALRRHATSKIKNQADFFRIRTLGFRGEALPSIASVSVLTLLTAVDGASHG 60 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ G ++ V P GT V V DLFF PA Sbjct: 61 TKLVARGGEVEEVIPATSPVGTKVCVEDLFFNTPA 95 >gi|325091282|gb|EGC44592.1| DNA binding protein [Ajellomyces capsulatus H88] Length = 736 Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats. Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 1/68 (1%) Query: 2 KIRK-LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 KI+K L +IN+IAAGEII P A+KELIENS+DA ++ VE ++ GG QITDNG Sbjct: 32 KIQKALDPDVINKIAAGEIIVAPMHALKELIENSVDAGATSVEILVKDGGLKLLQITDNG 91 Query: 61 FGMTSEEI 68 G+ E++ Sbjct: 92 HGIDVEDL 99 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 54/260 (20%), Positives = 103/260 (39%), Gaps = 6/260 (2%) Query: 142 VEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQST 201 ++V DLF+ +P R +S E I DV+ R A+ V+F+ + ++ + Sbjct: 94 IDVEDLFYNVPTRRRAFRSSSEEYAKILDVVGRYAVHCSGVAFSCKKHGDSGVSISTSTN 153 Query: 202 NGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYTGIPTFNRGNANQFYVFINGRTV 259 + +RI Q+ G + ++ + G+ ++ +FIN R+V Sbjct: 154 STTV-DRIRQIHGSAVASELIDFSVDDPRLGFRASGWASNANYH-AKRTTVLLFINHRSV 211 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 + + I AY+ +P G +P L LEI+P++VDVNVHP K + F N I I Sbjct: 212 ESSAVRRAIEQAYSNFLPKGGHPFAYLDLEIEPQRVDVNVHPTKREVNFLNEDEIIGSIC 271 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTN 379 +IQ+ + +S + + + + + L + Sbjct: 272 TTIQQKLATVD--SSRTFMVQTLLPVGRTQSASVNSNAEPPFDDRQPTPRTLSGTKRPYE 329 Query: 380 DLLPSDDPTYSEDNDPVEES 399 + L D + + + + Sbjct: 330 NNLVRTDASMRKITSMLPPA 349 >gi|253747793|gb|EET02300.1| Mlh2-like protein [Giardia intestinalis ATCC 50581] Length = 1473 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 27/244 (11%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+LS I ++ + + P+ +KELIENSLDA ++ V+ + G + DNG G Sbjct: 18 IRRLSPLDIIRLNSLDCANSPADVVKELIENSLDAGATSVKVFYSYYGYREITVYDNGSG 77 Query: 63 MT-SEE-IPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 ++ ++ + +CTSKI D+ ++ T+GFRG AL I L + SR + Sbjct: 78 ISGRDDSFEVIANSNCTSKIRVYDEIFSVQTYGFRGNALMWISLKGELQIFSRGSKGAEV 137 Query: 119 AQIAISGEKISSVRPVAMN-------------------PGTIVEVRDLFFTIPARLNFLK 159 + + S+ P+ TI+ V +L + Sbjct: 138 LRAIYVNGGLFSIVPIRAEDEEYVLRSFVGHTNIDVSGRFTIIVVSNLGDSFHEYEVSPS 197 Query: 160 SEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFIN 219 +++ E D I+R +I + F + + +R+ V + F + Sbjct: 198 AQRSELE---DTIKRYSIPHYDKEFILY-DTDLNIPILTLEKRLSVYDRLFDVRRDIFAS 253 Query: 220 NAVE 223 VE Sbjct: 254 THVE 257 >gi|171466329|gb|ACB46381.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 15/183 (8%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + + R TSKI D +I +FGFRGEAL S Sbjct: 1 IRLFVSSNCYDLLMVCDTGHGIERTDYSLLCHRFATSKIETFSDIYSILSFGFRGEALSS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++SR + I V + + TI+ V DL Sbjct: 61 ISYVSRMIVVSRTKNQPAYVAVYIDGKLHFDPKTLTSEHTDFFVSTLKADSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPE 207 F+ P R N ++ + +L +++ ++ A P ++ S I + + + N + Sbjct: 121 FYAEPIRRNQIRGSKTSLDL-QELLISISAANPTREYSISFIDNPQAIQREIQSWLNDTQ 179 Query: 208 RIS 210 IS Sbjct: 180 HIS 182 >gi|332867728|ref|XP_003318725.1| PREDICTED: putative postmeiotic segregation increased 2-like protein 11-like [Pan troglodytes] Length = 130 Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 41/67 (61%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 22 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 81 Query: 63 MTSEEIP 69 + E + Sbjct: 82 VEEENLE 88 >gi|171466325|gb|ACB46379.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 15/183 (8%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + + R TSK+ D +I +FGFRGEAL S Sbjct: 1 IRLFVSSNCYDLLMVCDTGHGIERTDYSLLCHRFATSKVETFSDIYSIQSFGFRGEALSS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ + I + + + TI+ V DL Sbjct: 61 ISYVSRMIVVSKTKNQPAYVAVYIDGKLHFDPKTLTSEHTDFFISTLKADSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPE 207 F+ P R N ++S + +L +++ ++ A P ++ S I + + + N + Sbjct: 121 FYAEPIRRNQIRSSKTSLDL-QELLISISAANPTREYSISFIDNPQAIQREIQSWLNDTQ 179 Query: 208 RIS 210 IS Sbjct: 180 HIS 182 >gi|115398315|ref|XP_001214749.1| predicted protein [Aspergillus terreus NIH2624] gi|114192940|gb|EAU34640.1| predicted protein [Aspergillus terreus NIH2624] Length = 862 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 113/296 (38%), Gaps = 46/296 (15%) Query: 331 ISTSSVLSKKMISSFHQDNAPKTHLPKYATS------LTNTQEKLFLQENRLSTNDLLPS 384 S +S +++ Q+ + P ++ + + Q ++ DL Sbjct: 541 HRPRSAVSNTAHNAWVQNVLSRWGNPVFSRAEQPISVFDSGQTNPAEGRPGSTSGDLCGF 600 Query: 385 DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG------LVIVDQHAAHERL 438 +D S + + AQI Q +I+++ LV++DQHAA ER Sbjct: 601 EDFGLSRFREKLH---RQDLDTAEVIAQIDQKFILARLRPSSPSEFVLVLIDQHAADERC 657 Query: 439 IFEKMRQDF---NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG--IKAERFGPN 493 E++ +F + + + P ++++ + E +L + E G E+ + Sbjct: 658 RVERLFGEFFADDRSGRVQTITVDPIVLEVAKNEASLFERYREFFKCWGVEFTLEQGADD 717 Query: 494 ---AIAIREIPAILSKKN--IPQLLRDIID--------------EIIDSSTTYTLQDRIE 534 AI + +P++++++ P L+ D+I E S R+ Sbjct: 718 RSAAIVVSTLPSLIAERCRVEPNLITDLIRGEIWTREETGRGPFEAATSGEGLNWATRMN 777 Query: 535 -------NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++L + AC +I + E RL+ ++ + QC HGRP+ I + Sbjct: 778 GCPKGIVDLLNSRACRTAIMFNDALAVDECQRLVMQLARCLFPFQCAHGRPSMIPI 833 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 60/439 (13%), Positives = 138/439 (31%), Gaps = 61/439 (13%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 +I L +I ++ + I + + + EL++N+LDA + + + GG + D+ Sbjct: 7 RIEPLPPDVIAKLKSSTSITQLNGVVVELVKNALDANAHTIYVTVDFPRGGC---VVEDD 63 Query: 60 GFGMTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ EE + H +SK+ + +G +G L S+ ++S LT+ S + + Sbjct: 64 GAGIPREEFEPGGGLGRAHHSSKLH---AGKAVYGRKGLFLASLSSLSLLTITSHHIRQS 120 Query: 117 TGAQIAISG--------EKISSVRPVAMNPGTIVEVRDLFFTIPAR---LNFLKSEQVET 165 + I GT V V DLF +P R + + E Sbjct: 121 STNAIIFHRAAPVARLTPAPVQQELRFRAHGTSVTVNDLFGNMPVRVKSRSLALQKPDEL 180 Query: 166 NLITDVIRR----MAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPE-------------- 207 + + ++ + IA ++ + ++N Sbjct: 181 DRQWEELKHLIVSVMIANDGLTKLVLSDARKERRLNLSPRPSRLWRDGELDVRRFASILT 240 Query: 208 -----RISQVIGEDFINNAVELNEKSNEITLQG-------YTG---IPTFNRGNANQFYV 252 + D ++ V I L + P + R NAN Y Sbjct: 241 QAGLVDVQSPDQWDTVSACVPDLSIHAAICLSPSPTKKVQFISIGINPVYPRNNANLLYN 300 Query: 253 FINGRTVQDKFILSTIRTAYAETIPL----GRYPVVVLLLEIDPRQVDVNVHPAKSYIRF 308 IN F + R+P+ + +++ ++ + Sbjct: 301 EINRLFASSDFGTGAANNPNPGGTSMAKNVNRWPMFYIRIDMGGTEIKDSDEEFP--ESD 358 Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 ++ I + + + + + + + + ++ + P + ++ E+ Sbjct: 359 KSIQRILDVLGAMVSEFLAQHHLRPRAGKRRQGPRKQDPNTLPASETTSRRLDYASSTEE 418 Query: 369 LFLQENRLSTNDLLPSDDP 387 + ++ Sbjct: 419 ALGDQVKMPAFQRSSQSQY 437 >gi|290983030|ref|XP_002674232.1| predicted protein [Naegleria gruberi] gi|284087821|gb|EFC41488.1| predicted protein [Naegleria gruberi] Length = 447 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 66/456 (14%), Positives = 158/456 (34%), Gaps = 29/456 (6%) Query: 143 EVRDLFFTIPARLNFLKSEQVETNL-ITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQST 201 V +F P R L+ + I D I + + + + ++ Sbjct: 1 MVEGIFSNYPVRKKQLEEHPDQYLRSIVDFIEVESFKLVDIQIALVCDGMSIFDLSNSEK 60 Query: 202 NGNFPERISQVIGEDFINNAVE--LNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTV 259 +RI + E + + K E+ + G V +N R Sbjct: 61 EQALHQRIRKRYEELTRRRNLFPIEDIKFGELQVSGIVDKNDITSKIK---IVIVNNRVY 117 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 I T + G + + +L+ P ++ ++ + + + I Sbjct: 118 -------PIETLIKKGEEFGSFVLCASILKAPPHNSEMINSELRNALFYSKLHNESSTIQ 170 Query: 320 QSIQKAINKKGIST-SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 +++ +K + SS L KM + +N K + ++E ++ Sbjct: 171 IYNEESEQRKEFAPLSSSLYDKMYNRKPSENKIKGDRLNINQLINKSKEINGIKTIPKPQ 230 Query: 379 NDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERL 438 + S + + + + + ++ + L+ +DQHAA ER+ Sbjct: 231 PKFMSSPKKKKLLNISLDKNQMKQLKFINQWEKKFILTSLKTENSLLLIAIDQHAADERV 290 Query: 439 IFEKMRQ----DFNSTKITSQTLLTPEIIDLLE----GECALIMEHDEDLHRLGIKAERF 490 E ++Q + L+ + ++ + +L+ ++ + L + Sbjct: 291 RMEMIQQNILDYAQQSPGPWVQPLSKQTLNSTKVEGSKTISLLKQNKDKLSKWYWNFIII 350 Query: 491 GPNA----IAIREIPAILSKKNIPQL-LRDIIDEI--IDSSTTYTLQDRIENILATMACY 543 + + + IP + +K+ +L ++ + ++ +T R+ ++ + AC Sbjct: 351 HEESTNAFLKLNTIPCLFVEKDSIELGFESMMSFLSELEFDSTCWYPKRVLELIQSKACR 410 Query: 544 GSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT 579 G+I G + + + N+LL+++ QC HGRP+ Sbjct: 411 GAIMFGDVLSTEKCNQLLQQLSNCQLPFQCAHGRPS 446 >gi|315056807|ref|XP_003177778.1| hypothetical protein MGYG_01841 [Arthroderma gypseum CBS 118893] gi|311339624|gb|EFQ98826.1| hypothetical protein MGYG_01841 [Arthroderma gypseum CBS 118893] Length = 992 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 15/163 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + Q+ + I+ + I EL++NSLDA++S V I K + D+G G Sbjct: 8 IRVLPQDVARQMTSSSIVTNLNGVIVELVKNSLDADASTVTINI-DFQKGTCTVEDDGIG 66 Query: 63 MTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 + E + H TSK + +G +G + S+ +++ +T+ SR Sbjct: 67 IPPNEFHESGGLGKLHHTSKFY---AAGQIYGRKGIFISSLISMALVTITSRNSSFQETN 123 Query: 120 QIAISGEKI--------SSVRPVAMNPGTIVEVRDLFFTIPAR 154 I K+ + GT V V DLF +P R Sbjct: 124 SIIFRHSKLISRLCPAPIQHDLLHPQHGTRVTVNDLFGNLPVR 166 Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 98/298 (32%), Gaps = 52/298 (17%) Query: 338 SKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ----ENRLSTNDLLPSDDPTYSEDN 393 K + + P +T ++ L ++ N L+ D + S N Sbjct: 638 WKNPTFPLPEPSIPSITSQIRSTDKWSSPAALGSHCLGCDDPQGINTLIGLTDKSDSRLN 697 Query: 394 DPVEESEATHYQLGIACAQIHQNYII--SQTTDGLVIVDQHAAHERLIFEKMRQDFN--- 448 E Q+ + + + + + LV+VDQHAA ER E++ Sbjct: 698 KCALEKAKVIAQVDQKFILLRTSLLCKGREGEEVLVLVDQHAADERCRVEELFAALCGLS 757 Query: 449 -STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERF----GPNAIAIREIPAI 503 S + + TP + E L G + G ++ ++ +P + Sbjct: 758 PSDNVETTIFPTPISFRIPAQEAKLFETRSGYFSSWGCLYDVLRKSEGYYSLVVKGLPTL 817 Query: 504 LSKKN--IPQLLRDIIDE---------------IIDSSTTY------------------- 527 ++++ P+L D++ +++ S + Sbjct: 818 IAERCRTEPRLAIDMLRSEIWDQTATTKTLIGSVLEESNSQGFAGKPPGMTEAHRYWLQR 877 Query: 528 --TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ +++ + +C +I + E L+ + K QC HGRP+ + + Sbjct: 878 IGCCPKKMVDLIVSRSCRSAIMFNDVLSISECQNLVSRLAKCAFPFQCAHGRPSMVPI 935 >gi|123448722|ref|XP_001313087.1| hypothetical protein [Trichomonas vaginalis G3] gi|121894958|gb|EAY00158.1| conserved hypothetical protein [Trichomonas vaginalis G3] Length = 582 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 51/323 (15%), Positives = 119/323 (36%), Gaps = 16/323 (4%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDF-SNIHTFGFRGEALPSI 100 + + GG + ++DNG G+ E + TSK +++ TFGF G +L SI Sbjct: 2 INISLINGGYTNIIVSDNGCGIPRENFSKLCHFNATSKYNEESPDKYDTFGFHGASLASI 61 Query: 101 -GAVSHLTLMSRPPQNNTGAQIAISGEK-ISSVRPVAMNPGTIVEVRDLFFTIPARLNFL 158 + L + SR G + + + ++ GT +E+ +L ++ + Sbjct: 62 TCSCPTL-ITSRTRAEKIGTKGQFNYSTLVGDLQNAQCQYGTTIELNNLSDSVDQAVTKN 120 Query: 159 KSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQS-TNGNFPERISQVIG-ED 216 I +++ + Y +SF + ++S T N + + + ++ Sbjct: 121 IQNSQSNLTIKKLVQSYSALYYNISF------KLLTTLPYESMTKKNLIQSLRAIYNIQN 174 Query: 217 FINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI 276 + + + N + + +P F+NG+ +++K + ++++ Y + Sbjct: 175 TPMHPISRTFECNNVKAALFVTLPEATSIYPQFV-FFLNGQRIKNKALKKSVKSVYQRSG 233 Query: 277 PLGRYPVVVLLLEIDPR--QVDVNV-HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIST 333 + V +L E P+ + N P + + T++ I + + Sbjct: 234 NIHTPVVFILFSEETPQFKFIPTNYPFPNQIRMSGELETMVEEAISIIRKDGDGEIDFDI 293 Query: 334 SSVLSKKMISSFHQDNAPKTHLP 356 + I + + P+ P Sbjct: 294 NEYRKGNKIPRYPIEIQPEMQNP 316 >gi|149239680|ref|XP_001525716.1| hypothetical protein LELG_03644 [Lodderomyces elongisporus NRRL YB-4239] gi|146451209|gb|EDK45465.1| hypothetical protein LELG_03644 [Lodderomyces elongisporus NRRL YB-4239] Length = 702 Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 22/180 (12%) Query: 426 LVIVDQHAAHERLIFEKMRQDF--NSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 LV++DQHA+ ER+ EK+ ++F + L P IIDL E + ++ + Sbjct: 517 LVVLDQHASDERVKIEKLIKEFVDEMSANPGLRLCQPLIIDLHPHELQYLHQYASNFQLF 576 Query: 484 GIKAERFGPNAIAIREIPAIL--SKKNIPQLLRDII---------------DEIIDSST- 525 GI+ +A+ ++P +L N + ++D++ I D Sbjct: 577 GIEYIIIDQIKLAVTKLPKVLITKVGNNTKYMKDMLLQHSFDVNNKVKNQYFNIKDEDWF 636 Query: 526 --TYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ + I ++L + AC +I G + EM+ L++E+ + QC HGRP+ + L Sbjct: 637 AISHNIPRAIIDLLNSKACRSAIMFGDPLTFTEMSSLIQELSRCKLPFQCAHGRPSVVPL 696 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 96/299 (32%), Gaps = 54/299 (18%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 ++ +L++ +INQI + I+ L+++SL + + S + D+G Sbjct: 3 RLERLNDDVINQIKSHLRFNTIDSIIEHLLKDSLQRSPKNIIVKVYLDSLS-IHLQDDGD 61 Query: 62 GMTSEEIPMAVQRHCTSK---ISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 G T +E+ + C SK + + G+ IGAVS +++S+ Sbjct: 62 GYTCKELEKLLS--CASKPDPFATKAYSSSLLGY-------IGAVSQFSIVSKYKTAQNI 112 Query: 119 AQIAISGEK--------------------------------ISSVRPVAMNPGTIVEVRD 146 ++ + + + G++ V + Sbjct: 113 FKMESNFQDGSVTIHNTDNLQMQVQKLMQTLTLMLMQTLPYKQFCEIETVTHGSVYRVEN 172 Query: 147 LFFTIPARLNF------LKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQS 200 +F+ P R K + ++ + + S S S Sbjct: 173 IFYNFPVRRKQIQAMAVHKIVNSIKLVFLKLLLFNLGVHLEFSIKDSHAPQFEQVFKLTS 232 Query: 201 TNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTV 259 + ++ + + Q + + + + G G+ N + Y+F+N + + Sbjct: 233 KHDDYGQTLLQSLF-GLQITWQNIKARYKSFEITGIIGLEPVN--SKTHQYIFVNNKLM 288 >gi|75516614|gb|AAI01599.1| Postmeiotic segregation increased 2-like 3 [Homo sapiens] gi|119592172|gb|EAW71766.1| postmeiotic segregation increased 2-like 3, isoform CRA_b [Homo sapiens] Length = 169 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 40/67 (59%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 90 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 149 Query: 63 MTSEEIP 69 + E Sbjct: 150 VEEENFE 156 >gi|1304123|dbj|BAA07512.1| PMS6 [Homo sapiens] gi|1407579|dbj|BAA07473.1| hPMS6 [Homo sapiens] Length = 159 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 40/67 (59%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 20 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 79 Query: 63 MTSEEIP 69 + E Sbjct: 80 VEEENFE 86 >gi|171466333|gb|ACB46383.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 75/183 (40%), Gaps = 15/183 (8%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + + R TSKI D +I + GFRGEAL S Sbjct: 1 IRLFVSSNCYDLLMVCDTGHGIERTDYSLLCHRFATSKIETFSDIYSIQSSGFRGEALSS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ + I + + + TI+ V DL Sbjct: 61 ISYVSRMIVVSKTKNQPAYVAVYIDGKLHFDPKTLTSEHTDFFISTLKADSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPE 207 F+ P R N ++S + +L +++ ++ A P ++ S I + + + N + Sbjct: 121 FYAEPIRRNQIRSSKTSLDL-QELLISISAANPTREYSISFIDNPQAIQREIQSWLNDTQ 179 Query: 208 RIS 210 IS Sbjct: 180 HIS 182 >gi|326469956|gb|EGD93965.1| hypothetical protein TESG_01494 [Trichophyton tonsurans CBS 112818] Length = 1000 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 15/163 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + QI + I+ + I EL++NSLDA +S V + K + D+G G Sbjct: 8 IRVLPQDVAGQIRSSSIVTSLNGVIVELLKNSLDANASAVMVNV-DFQKGTCTVEDDGIG 66 Query: 63 MTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 + E + H TSK +G +G +PS+ +++ +T+ SR Sbjct: 67 IPPNEFHENGGLGKLHHTSKFY---ITGQVYGRKGIFIPSLISMALVTITSRNVSFQETN 123 Query: 120 QIAISGEKI--------SSVRPVAMNPGTIVEVRDLFFTIPAR 154 + K+ + GT V V DLF +P R Sbjct: 124 SVIFRHSKLISRLCPAPIQHDLLHPQHGTRVAVNDLFSNLPVR 166 Score = 103 bits (258), Expect = 6e-20, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 46/210 (21%) Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFN----STKITSQTLLTPEIIDLLEGECALIME 475 + + LV+VDQHAA ER E++ S + L TP + E L Sbjct: 732 REGEEVLVLVDQHAADERCRVEELFTTLCTLTTSGNVDITNLPTPISFRISAKEAILFEA 791 Query: 476 HDEDLHRLGIKAERFGPN----AIAIREIPAILSKKN--IPQLLRDII------------ 517 G E ++ +R +P +++++ P+L D++ Sbjct: 792 RSGYFSSWGCLYEVLRETEGCYSLVVRGLPTLIAERCRVEPRLAIDMLRAEVWDQTEISK 851 Query: 518 ----DEIIDSST--------------------TYTLQDRIENILATMACYGSIRSGRKMQ 553 + + + + ++ +++ + +C +I + Sbjct: 852 PSIRSALEECGSQGFAEIGLGVTETDHCWLQRIGSCPKKMVDLIVSRSCRSAIMFNDVLS 911 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 E L+ + K QC HGRP+ + + Sbjct: 912 VSECRSLVSRLAKCAFPFQCAHGRPSMVPI 941 >gi|171466343|gb|ACB46388.1| Mlh1 [Giardia intestinalis] gi|171466347|gb|ACB46390.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 15/169 (8%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + P+ R TSKI+ +D +I +FGFRGEAL S Sbjct: 1 IGLFVSNNCYDLIMVYDTGHGIELADYPLLCHRFATSKITAFNDIYSIQSFGFRGEALAS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ + ++ A N TI+ V DL Sbjct: 61 ISYVSRMIVISKVENQPGHLAVYMNGKLHFDPETLAAEYTDFFTSTFASNSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKSNRYK 195 F+ R N +++ + ++ ++ A + + S +F + + Sbjct: 121 FYADSIRRNQIRNSKANLDMQDLLMSISAANHTREYSISFISDSQAIQR 169 >gi|326484137|gb|EGE08147.1| DNA mismatch repair protein [Trichophyton equinum CBS 127.97] Length = 1000 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 15/163 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + + QI + I+ + I EL++NSLDA +S V + K + D+G G Sbjct: 8 IRVLPQDVAGQIRSSSIVTSLNGVIVELLKNSLDANASAVMVNV-DFQKGTCTVEDDGIG 66 Query: 63 MTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 + E + H TSK +G +G +PS+ +++ +T+ SR Sbjct: 67 IPPNEFHENGGLGKLHHTSKFY---ITGQVYGRKGIFIPSLISMALVTITSRNVSFQETN 123 Query: 120 QIAISGEKI--------SSVRPVAMNPGTIVEVRDLFFTIPAR 154 + K+ + GT V V DLF +P R Sbjct: 124 SVIFRHSKLISRLCPAPIQHDLLHPQHGTRVAVNDLFSNLPVR 166 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 71/210 (33%), Gaps = 46/210 (21%) Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFN----STKITSQTLLTPEIIDLLEGECALIME 475 + + LV+VDQHAA ER E++ S + L TP + E L Sbjct: 732 REGEEVLVLVDQHAADERCRVEELFTTLCTLTTSGNVDITNLPTPISFRISAQEAILFEA 791 Query: 476 HDEDLHRLGIKAERFGPN----AIAIREIPAILSKKN--IPQLLRDII------------ 517 G E ++ +R +P +++++ P+L D++ Sbjct: 792 RSGYFSSWGCLYEVLRETEGCYSLVVRGLPTLIAERCRVEPRLAIDMLRAEVWDQTEISK 851 Query: 518 ------------DEIIDSS------------TTYTLQDRIENILATMACYGSIRSGRKMQ 553 E + + ++ +++ + +C +I + Sbjct: 852 PSIRSALEECGSQEFAEIGLGVTETDHCWLQRIGSCPKKMVDLIVSRSCRSAIMFNDVLS 911 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 E L+ + K QC HGRP+ + + Sbjct: 912 VSECRSLVSRLAKCAFPFQCAHGRPSMVPI 941 >gi|171466345|gb|ACB46389.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 15/169 (8%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + P+ R TSKI+ +D +I +FGFRGEAL S Sbjct: 1 IGLFVSNNCYDLIMVYDTGHGIELADYPLLCHRFATSKITAFNDIYSIQSFGFRGEALAS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ + ++ A N TI+ V DL Sbjct: 61 ISYVSRMIVISKVENQPGHLAVYMNGKLHFDPETLAAEYTDFFTSTFASNSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKSNRYK 195 F+ R N +++ + ++ ++ A + + S +F + + Sbjct: 121 FYADSIRRNQIRNSKANLDMQDLLMSISAANHTREYSISFISDSQAIQR 169 >gi|34783389|gb|AAH36866.1| MLH3 protein [Homo sapiens] Length = 335 Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 97/254 (38%), Gaps = 25/254 (9%) Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 S + Q +N + + D + + + Y IH ++ Sbjct: 40 SSESLQSLFSEWDNPVFARYPEVAVDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQ 99 Query: 421 QTTD----GLVIVDQHAAHERLIFEKMRQDFNS-TKITSQTLLTPEIIDLLEGECALIME 475 Q + L+ E +EK + + K+ S TL+ P I + E + L+ Sbjct: 100 QVDNKFIACLMSTKTEENGEADSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 159 Query: 476 HDEDLHRLG--IKAERFGPNAIAIREIPAILSKKN---------------IPQLLRDIID 518 + ++L LG + + + ++P ++ + + +R+ ++ Sbjct: 160 YHKNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLE 219 Query: 519 EIIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 + + TL ++ +LA+ AC+G+I+ + E RL+ + QC HGR Sbjct: 220 LLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGR 279 Query: 578 PTFIKLKLSDIEKL 591 P+ + L +DI+ L Sbjct: 280 PSMLPL--ADIDHL 291 >gi|171466327|gb|ACB46380.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 15/166 (9%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + + R TSKI D + +FGFRGEAL S Sbjct: 1 IRLFVSSNCYDLLMVCDTGHGIERTDYSLLCHRFATSKIETFSDIYSTQSFGFRGEALSS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ + I + + + TI+ V DL Sbjct: 61 ISYVSRMIVVSKTKNQPAYVAVYIDGKLHFDPKTLTSEHTDFFISTLKADSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNR 193 F+ P R N ++S + +L +++ ++ A P ++ S I + + Sbjct: 121 FYAEPIRRNQIRSSKTSLDL-QELLISISAANPTREYSISFIDNPQ 165 >gi|171466337|gb|ACB46385.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 15/169 (8%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + P+ R TSKI+ +D +I +FGFRGEAL S Sbjct: 1 IGLFVSNNCYDLIMVYDTGHGIELADYPLLCHRFATSKITAFNDIYSIQSFGFRGEALAS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ + ++ A N TI+ V DL Sbjct: 61 ISYVSRMIVISKVENQPGHLAVYMNGKLHFDPETLAAEYTDFLTSTFASNSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKSNRYK 195 F+ R N +++ + ++ ++ A + + S +F + + Sbjct: 121 FYADSIRRNQIRNSKANLDMQDLLMSISAANHTREYSISFISDSQAIQR 169 >gi|307267461|ref|ZP_07548948.1| ATP-binding region ATPase domain protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306917518|gb|EFN47805.1| ATP-binding region ATPase domain protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 63 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 29/59 (49%), Positives = 42/59 (71%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 KI L EK IN+I+AGE++ERP+ +KELIENS+DA S + I GG + +++D+G Sbjct: 3 KIHLLDEKTINKISAGEVVERPASIVKELIENSIDAGSKNITVEILEGGIPYIKVSDDG 61 >gi|171466351|gb|ACB46392.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 114 bits (286), Expect = 4e-23, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 76/210 (36%), Gaps = 25/210 (11%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + P+ R TSKI+ +D +I +FGFRGEAL S Sbjct: 1 IGLFVSNNCYDLIMVYDTGHGIELADYPLLCHRFATSKITAFNDIYSIQSFGFRGEALAS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAM-------------NPGTIVEVRD 146 I VS + ++S+ G K+ N TI+ V D Sbjct: 61 ISYVSRMIVISKVENQP-GHLAVYMNGKLHFDPETLAAEYTDFFTSTLASNSFTIICVTD 119 Query: 147 LFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKS--------NRYKMN 197 LF+ R N +++ + ++ ++ A + + S +F + ++ Sbjct: 120 LFYADSIRRNQIRNSKANLDMQDLLMSISAANHTREYSISFISDSQAIQRELQAWLDDIH 179 Query: 198 FQSTNGNFPERISQVIGEDFINNAVELNEK 227 S + I + V + Sbjct: 180 TTSGMLSLISNIIESGVTALHFKPVTTRYE 209 >gi|1061424|gb|AAA97459.1| hPMSR3 [Homo sapiens] Length = 264 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 40/67 (59%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 186 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 245 Query: 63 MTSEEIP 69 + E Sbjct: 246 VEEENFE 252 >gi|325191795|emb|CCA25619.1| hypothetical protein PITG_07252 [Albugo laibachii Nc14] Length = 771 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 69/186 (37%), Gaps = 20/186 (10%) Query: 424 DGLVIVDQHAAHERLIFEKMRQD-----FNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 +V DQHA ER+ EK+ + I + + E + +++ Sbjct: 584 CMIVAFDQHAVDERIKLEKLEKTLLGLSGTERNIERYHHCPGLKLWMNAQEDRALHVYEK 643 Query: 479 DLHRLGIKAERFG-------------PNAIAIREIPAILSKKNIPQLLRDIIDEII-DSS 524 L G ER ++ ++ P + R+ ++ ++ + + Sbjct: 644 TLDDWGFYFERISHDKSKYRMKESIDGTSLILKTSPKFDGRVATETDFREFVNYLLEEYA 703 Query: 525 TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 TT + I ++ + AC +I G + E RLL ++ + QC HGR + L Sbjct: 704 TTEQIPPMISRLIKSRACRSAIMFGEWLSHAECQRLLSDLSRCSLPFQCAHGRSSIAPLA 763 Query: 585 LS-DIE 589 D++ Sbjct: 764 EYQDLD 769 Score = 77.4 bits (189), Expect = 7e-12, Method: Composition-based stats. Identities = 67/370 (18%), Positives = 140/370 (37%), Gaps = 48/370 (12%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF-- 61 +KLS + + I A I AI E + N++DA++S ++ + + F + DNG Sbjct: 2 KKLSSQ--HLILACHQIPHIVTAITETVYNAIDAQASAIKLYL-NLPHASFSVIDNGTHH 58 Query: 62 ---------------GMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHL 106 G S+ + RH S S+ +G G L S+ AV+ + Sbjct: 59 LSYALTPPNPPFSGNGFKSDSLFNL--RHEES-ASESHETAAFYGANGAFLSSLIAVADV 115 Query: 107 TLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGT----IVEVRDLFFTIPARLN---FLK 159 + SR + +++ ++ + + V++LF +P R + Sbjct: 116 EIESRARDEWIVYRKVFKNAEVTFNGRDTLSHRSITGVTISVKNLFGRLPIRRRLLGTSR 175 Query: 160 SEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN----FPERISQVIGE 215 +Q I + + +++ +PK+SF +N + + + + + +R+ + G Sbjct: 176 YQQSALTSIRNFFQSLSLIWPKISFEIICENANAHSNRIGAFHIDKVDEYLDRLVHMFGS 235 Query: 216 DFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ-------------FYVFINGRT-VQD 261 + ++ + E ++ GY GI + + Y F+N R Sbjct: 236 TVASQLQSISHATMEFSVCGYFGITVTELSSRHWQIIQTSKHARNCYQYAFLNNRPHANF 295 Query: 262 KFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 + +S + + G V VL + +DV K+ + F + + F+ Q Sbjct: 296 QAQVSRVISKQIAKTCDGCLVVFVLAFQAGRDAMDVIKSDTKNGVIFASHDTFQAFMTQV 355 Query: 322 IQKAINKKGI 331 + I++ I Sbjct: 356 TKMMISRSSI 365 >gi|171466355|gb|ACB46394.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 77/209 (36%), Gaps = 23/209 (11%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + P+ R TSKI+ +D +I +FGFRGEAL S Sbjct: 1 IGLFVSNNCYDLIMVYDTGHGIELADYPLLCHRFATSKITTFNDIYSIQSFGFRGEALAS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ + ++ + N TI+ V DL Sbjct: 61 ISYVSRMIVISKVENQPAHLAVYMNGKLHFDPETLAAEYTDFFTNTLVSNSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKS--------NRYKMNF 198 F+ R N ++S + ++ ++ A + + + +F + ++ Sbjct: 121 FYADSIRRNQIRSSKASLDMQDLLMSISAANHTREYAISFISDSQAIQRELQAWLDDIHT 180 Query: 199 QSTNGNFPERISQVIGEDFINNAVELNEK 227 S + I + V + Sbjct: 181 TSGMLSLISNIIESGVTALHFKPVTTRYE 209 >gi|171466349|gb|ACB46391.1| Mlh1 [Giardia intestinalis] gi|171466353|gb|ACB46393.1| Mlh1 [Giardia intestinalis] gi|171466359|gb|ACB46396.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 77/209 (36%), Gaps = 23/209 (11%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + P+ R TSKI+ +D +I +FGFRGEAL S Sbjct: 1 IGLFVSNNCYDLIMVYDTGHGIELADYPLLCHRFATSKITTFNDIYSIQSFGFRGEALAS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ + ++ + N TI+ V DL Sbjct: 61 ISYVSRMIVISKVENQPAHLAVYMNGKLHFDPETLAAEYTDFFTNTLVSNSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKS--------NRYKMNF 198 F+ R N ++S + ++ ++ A + + + +F + ++ Sbjct: 121 FYADSIRRNQIRSSKASLDMQDLLMSISAANHTREYAISFISDSQAIQRELQAWLDDIHT 180 Query: 199 QSTNGNFPERISQVIGEDFINNAVELNEK 227 S + I + V + Sbjct: 181 TSGMLSLISNIIESGVTALHFKPVTTRYE 209 >gi|313104156|sp|Q13401|PM2P3_HUMAN RecName: Full=Putative postmeiotic segregation increased 2-like protein 3; AltName: Full=PMS2-related protein 3; AltName: Full=Postmeiotic segregation increased 2-like protein 9; AltName: Full=Postmeiotic segregation increased protein 5; AltName: Full=Putative postmeiotic segregation increased 2 pseudogene 3 gi|119592171|gb|EAW71765.1| postmeiotic segregation increased 2-like 3, isoform CRA_a [Homo sapiens] Length = 168 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 40/67 (59%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++DNG G Sbjct: 90 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 149 Query: 63 MTSEEIP 69 + E Sbjct: 150 VEEENFE 156 >gi|171466361|gb|ACB46397.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 77/209 (36%), Gaps = 23/209 (11%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + P+ R TSKI+ +D +I +FGFRGEAL S Sbjct: 1 IGLFVSNNCYDLIMVYDTGHGIELADYPLLCHRFATSKITTFNDIYSIQSFGFRGEALAS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ + ++ + N TI+ V DL Sbjct: 61 ISYVSRMIVISKVENQPAHLAVYMNGKLRFDPETLAAEYTDLFTNTLVSNSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKS--------NRYKMNF 198 F+ R N ++S + ++ ++ A + + + +F + ++ Sbjct: 121 FYADSIRRNQIRSSKASLDMQDLLMSISAANHTREYAISFISDSQAIQRELQAWLDDIHT 180 Query: 199 QSTNGNFPERISQVIGEDFINNAVELNEK 227 S + I + V + Sbjct: 181 TSGMLSLISNIIESGVTALHFKPVTTRYE 209 >gi|330862098|emb|CBX72264.1| hypothetical protein YEW_EM19540 [Yersinia enterocolitica W22703] Length = 163 Score = 113 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 84/162 (51%) Query: 171 VIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE 230 ++RR+A+A V+ S + R++ + G F+ +A+ ++ + + Sbjct: 1 MVRRIALARFDVAINLSHNGKLMRQYRAAPDPSQHERRLASICGPAFLQHALAISWQHGD 60 Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 +T++G+ P +R + Y ++N R ++D+ I IR AY + + + P VL L+I Sbjct: 61 LTIRGWVADPAASRTLSEMQYCYVNNRMMRDRLINHAIRQAYQDLLKDDQQPAYVLYLDI 120 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 DP QVDVNVHPAK +RF ++ +FI Q++ + + Sbjct: 121 DPHQVDVNVHPAKHEVRFHQARLVHDFIYQAVTTVLQQTAAR 162 >gi|321463519|gb|EFX74534.1| putative MLH3, MutL protein 3 [Daphnia pulex] Length = 775 Score = 113 bits (284), Expect = 6e-23, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 93/201 (46%), Gaps = 28/201 (13%) Query: 410 CAQIHQNYIISQTTDG----LVIVDQHAAHERLIFEKMRQDFNST------KITSQTLLT 459 +Q+ + +I T + LV++DQHAAHER+ E++ Q ++ ++ S L Sbjct: 543 VSQVDRKFICCITREDEKRYLVLIDQHAAHERVCLERLMQMHSTKNDDGYIQVLSSPLHP 602 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQ-------- 511 + G+ LI + + R G+ +F + ++ +P+ + I + Sbjct: 603 HLQLTFPIGDLQLIQKLSVEFTRFGLHL-QFSDSTVSATRVPSCFLAREINEIQRKRSSL 661 Query: 512 -------LLRDIIDEIIDSS--TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 L+ + I E + ++ L +I N+L ++AC+G+I+ G ++ + ++L++ Sbjct: 662 YKDLVVALIDETIAEFTKTGRLSSCLLPAQIRNVLNSLACHGAIKFGDELTPTQCSQLVK 721 Query: 563 EMEKNPNSSQCNHGRPTFIKL 583 + + QC HGRP L Sbjct: 722 ALGQCDVPFQCAHGRPLLAPL 742 Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 131/358 (36%), Gaps = 23/358 (6%) Query: 27 IKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSN 86 ++EL+ NS+ ++ + + + F Q+ DNG G+ S ++ + R+ + + N Sbjct: 11 VEELVLNSIHGNATCIAVRLDWMSR-FLQVVDNGRGIGSTQLQLFCSRN-----NQNVEN 64 Query: 87 IHTFGFRGEALPS-IGAVSHLTLMSRPPQNNTGAQIAISG--EKISSVRPVAMNPGTIVE 143 + EAL I S L + S+ ++ + + GT V Sbjct: 65 MVVDKHLEEALHLIIKHCSSLEIESQVKNSSVSYKRLYQNGIWRNVECVGTRSTSGTTVS 124 Query: 144 VRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNG 203 V D F + + + + +I + + +SF+ S + + Sbjct: 125 VFDFFRPPSSEE----TFDFDYQSLEKLIASFFLLHSHISFSLRVDPSKPPSLQTKKA-- 178 Query: 204 NFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKF 263 + ++ + S ++G N + +++F+N + V+ K Sbjct: 179 --KNTMLAAQQLFKSDSIIPFRGSSRHFKVKGL----FINHPGESSWFIFVNSQLVESKE 232 Query: 264 ILSTIRTAYAETIPLGRYPV-VVLLLEIDPRQVDVNVHPA-KSYIRFRNPTIIRNFIIQS 321 I+ I + + ++L ++ + + F N + + I S Sbjct: 233 IVDLITSVLSNLTSSQEQRFAIILNIKCSRAVCKFTIDSNVNRGVAFLNWNELLSLIQSS 292 Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTN 379 + + I+ I ++ +S+ +I+++ N + L + Q+++ + + +S+ Sbjct: 293 LDQFISHAPIKKTAFVSRWLIAAYGDGNLTTSPLTIKSLDFYPPQQEIKTETSEMSSP 350 >gi|194388058|dbj|BAG65413.1| unnamed protein product [Homo sapiens] Length = 711 Score = 113 bits (284), Expect = 7e-23, Method: Composition-based stats. Identities = 85/458 (18%), Positives = 156/458 (34%), Gaps = 94/458 (20%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 ++L + +++ +II +KELIENSLDA G + + Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDA------------GATSVDV------- 42 Query: 64 TSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAI 123 K+ + + +R +N Q + Sbjct: 43 ---------------KL-------------------------VLITTRTAADNFSTQYVL 62 Query: 124 S-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL---KSEQVETNLITDVIRRMAIAY 179 I S +P + GT V LF +P R F K + E I D++ I Sbjct: 63 DGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGILK 122 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQGYT 237 P + F K+ ++ +S + + V+G +NN + + + ++I L G+ Sbjct: 123 PDLRIVFVHNKAVIWQ---KSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFL 179 Query: 238 GIP-----TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLLLE 289 + + ++FIN R V K IL IR Y YPV L ++ Sbjct: 180 PKCDADHSFISLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKID 239 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSVLS 338 + VDVN+ P KS + +N + + + NK +S + ++ Sbjct: 240 VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVL 299 Query: 339 KKMISS---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTYSE 391 K + F++ + + TS+ Q + E+ +T+D L D Y Sbjct: 300 SKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGH 359 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + + ++ SQT Sbjct: 360 CSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCF 397 >gi|302500378|ref|XP_003012183.1| DNA mismatch repair protein (Mlh3), putative [Arthroderma benhamiae CBS 112371] gi|291175739|gb|EFE31543.1| DNA mismatch repair protein (Mlh3), putative [Arthroderma benhamiae CBS 112371] Length = 999 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 15/163 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + QI + I+ + I ELI+NSLDA +S V + K + D+G G Sbjct: 8 IRMLPRDVAGQIRSSSIVTSLNSVIVELIKNSLDANASAVMVNV-DFQKGACTVEDDGIG 66 Query: 63 MTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 + E + H TSK +G +G + S+ +++ +T+ S Sbjct: 67 IPPNEFHENGGLGKLHHTSKFYT---TGQVYGRKGIFISSLISMALVTITSHNISFQETN 123 Query: 120 QIAISGEKI--------SSVRPVAMNPGTIVEVRDLFFTIPAR 154 + K+ + GT V V DLF +P R Sbjct: 124 SVIFRHSKLISRLCPAPIQHDLLHPQHGTRVAVNDLFSNLPVR 166 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 70/206 (33%), Gaps = 46/206 (22%) Query: 424 DGLVIVDQHAAHERLIFEKMR----QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDED 479 + LV+VDQHAA ER E++ S + + L TP + E L Sbjct: 735 EALVLVDQHAADERCRVEELFAALCNLSPSGNVDTTNLPTPISFRIPAQEARLFEARSGY 794 Query: 480 LHRLGIKA----ERFGPNAIAIREIPAILSKKN--IPQLLRDIIDEIIDSSTTYTLQDRI 533 G E G ++ +R +P +++++ P+L D++ I T + Sbjct: 795 FSSWGCLYQVLREAEGYYSLVVRGLPTLITERCRVEPRLAIDMLRSEIWDPTEISKPSIR 854 Query: 534 E------------------------------------NILATMACYGSIRSGRKMQSIEM 557 +++ + +C +I + E Sbjct: 855 SALEECGSQGFTENGLGMAETHHCWLQRISGCPKKMVDLIVSRSCRSAIMFNDVLSVSEC 914 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKL 583 L+ + K QC HGRP+ + + Sbjct: 915 QNLVSRLAKCAFPFQCAHGRPSMVPI 940 >gi|171466339|gb|ACB46386.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 113 bits (283), Expect = 7e-23, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 70/170 (41%), Gaps = 17/170 (10%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + +++ + D G G+ + P+ R TSKI+ +D +I +FGFRGEAL S Sbjct: 1 IGLLVSNNCYDLIMVYDTGHGIELADYPLLCHRFATSKITTFNDIYSIQSFGFRGEALAS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAM-------------NPGTIVEVRD 146 I VS + ++S+ G K+ N TI+ V D Sbjct: 61 ISYVSRMIVISKVENQP-GHLAVYMNGKLHFDPETLAAEYTDFFTSTLASNSFTIICVTD 119 Query: 147 LFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKSNRYK 195 LF+ R N +++ + ++ ++ A + + S +F + + Sbjct: 120 LFYADSIRRNQIRNSKANLDMQDLLMSISAANHTREYSISFISDSQAIQR 169 >gi|310800217|gb|EFQ35110.1| hypothetical protein GLRG_10254 [Glomerella graminicola M1.001] Length = 936 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 116/309 (37%), Gaps = 32/309 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L E + ++ + + + + LI+NSLDA ++R++ I + + D+G Sbjct: 1 MSIKPLPEDVTRRMRSSATVTSINGVVCGLIKNSLDAGATRLKIAI-DYSRGNCIVEDDG 59 Query: 61 FGMTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+ E ++H TS+ + ++ + G G L S+ A+S LT+ S +N+ Sbjct: 60 SGILPVEFRETGGLGRQHHTSRNATEYE---SHGANGNFLASVAALSLLTITSHHHLHNS 116 Query: 118 GAQIAISGEKI--------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS-------EQ 162 + I ++ R V N GT V VRDLF ++ R+ + ++ Sbjct: 117 QNSLTIHNSRVLARNIPALPEQRLVTFNHGTRVTVRDLFGSMAVRVKQRAAVSEKAAVDR 176 Query: 163 VETNLITDVIRRMAIAYPKVSFTFS---TIKSNRYKMNFQSTNGNFPERISQVIGEDFIN 219 + L+ DV+ + V+ + ++ + + ++ Sbjct: 177 EWSRLVHDVVAILLAWPSDVALFVRDTVSNNETHFRPTATPRSDILTRSSRILAQSGLVD 236 Query: 220 N-----AVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAE 274 + ++++QG + A ++ V ++ + + + Sbjct: 237 GLGQAPWTPIGASVGKLSIQGCISLNPAATRRA--QFISFGIHPVTNEHGTNILYSEVNR 294 Query: 275 TIPLGRYPV 283 + + Sbjct: 295 VFAKSGFTM 303 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 77/210 (36%), Gaps = 47/210 (22%) Query: 421 QTTDGLVIVDQHAAHERLIFEKMRQDF-------NSTKITSQTLLTPEIIDLLEGECALI 473 Q+ LV+VDQHAA ER E + +D+ ++T+ P + EC ++ Sbjct: 699 QSNSVLVLVDQHAADERCRLEALMRDYFRPAKGSGEVVAKTETVQKPLRFEFSAKECKML 758 Query: 474 MEHDEDLHRLGIKAERFGPN------------AIAIREIPAILSKKN--IPQLLRDII-D 518 +++ R G+ E P + + +P + ++ P+LL +++ Sbjct: 759 RKYNHYFRRWGVFYEIEEPEEAQWRHRSKQLCKVDVTGLPPSILERCRSEPRLLAELLLQ 818 Query: 519 EIIDSSTTYTLQDR-------------------------IENILATMACYGSIRSGRKMQ 553 E+ + R I +L + +C +I + Sbjct: 819 EVWRAEEGEVPPVRPLSLANGGLGHDVDWVSNFHGCPQGILALLNSRSCRSAIMFNDVLS 878 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 E L+ + + QC HGRP+ + L Sbjct: 879 KDECESLVLRLSQCSFPFQCAHGRPSMVPL 908 >gi|70994800|ref|XP_752177.1| DNA mismatch repair protein (Mlh3) [Aspergillus fumigatus Af293] gi|66849811|gb|EAL90139.1| DNA mismatch repair protein (Mlh3), putative [Aspergillus fumigatus Af293] Length = 916 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 72/438 (16%), Positives = 148/438 (33%), Gaps = 79/438 (18%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 +I L +++ +I + I + + EL++N+LDA + V + GG + D+ Sbjct: 7 RIEPLPPEVVAKIKSSTSIINLNRVVVELVKNALDANARTVSVTVDFHRGGC---VVEDD 63 Query: 60 GFGMTSEEIPM---AVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ E + H TSK+ +G RG L S+ ++S LT++S + N Sbjct: 64 GDGIPPAEFESDGGLGKAHHTSKLYS---ARAVYGRRGLFLASLASLSLLTVISHHVRYN 120 Query: 117 TGAQIAISGEK--------ISSVRPVAMNPGTIVEVRDLFFTIPAR---LNFLKSEQVET 165 + + SS + + GT V V DLF +P R + E Sbjct: 121 STNSVIFHHSTPIARFIPAPSSHQLSCSSHGTRVIVNDLFGNMPVRVKSRALALQKPDEF 180 Query: 166 NLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN 225 D +RR+ + + + K+ + I +G I ++L Sbjct: 181 ERQWDDLRRLLV-------SLILANDHLTKLVVSTAGKERKLMIRPHVGRPGIRGDLDLK 233 Query: 226 EKSNEITLQGYT----------------------------------------GIPTFNRG 245 ++ + G P + R Sbjct: 234 RIASILMQAGLIESQNSDSWNYVSASVPGISLRAAVSLVPSPTRKVQFISIGIDPVYPRN 293 Query: 246 NANQFYVFINGRTVQDKFILSTIRTAYAETIP--------LGRYPVVVLLLEI-DPRQVD 296 + + Y IN F ++ P + ++P+ + +++ DPR++ Sbjct: 294 STDLLYSEINRLFALSDFGAVEAAPVSSDGHPGPRFTSKAVNKWPMFYIRIDVDDPRELF 353 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 H +I + ++ + + + + G+ + K +S +P Sbjct: 354 EEGHEVVPESNQSVQRLI-DVLVAMMSEFLKQHGLRPRAGRQTKDVSRSASVESPGAGRS 412 Query: 357 KYATSLTNTQEKLFLQEN 374 +A S+++ +E Sbjct: 413 NFAKSVSSRDRSSIAEEA 430 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 75/224 (33%), Gaps = 62/224 (27%) Query: 410 CAQIHQNYIISQTTDG------LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 AQ+ + +I+ + DG LV++DQHAA ER E + + + + I Sbjct: 661 IAQVDRKFILVKLADGRSSRSALVLIDQHAADERCRIESLFGAMFADGHRQVQSIRIDPI 720 Query: 464 DLLEGECA--LIMEHDEDLHRLGIKAERFGPNA-----IAIREIPAILSKKN--IPQLLR 514 L +H + G+ ++ + + +P +++++ P L+ Sbjct: 721 TFDIPLMEAALFGKHADSFASWGVGYTVERKSSARAALVVVTSLPTLIAERCRLEPDLVS 780 Query: 515 DIID--------------EIIDSSTTYTLQDR---------------------IENILAT 539 D+I + D + R I ++L + Sbjct: 781 DMIRGEIWKHEENGQGALALSDQRAQRSKVHRDELGVETEGNWVDRLTSCPQGIIDLLNS 840 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 AC +I + + E L C HGRP+ + + Sbjct: 841 RACRTAIMFNDMLTAEECKSL------------CAHGRPSMVPI 872 >gi|159124909|gb|EDP50026.1| DNA mismatch repair protein (Mlh3), putative [Aspergillus fumigatus A1163] Length = 916 Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats. Identities = 72/438 (16%), Positives = 148/438 (33%), Gaps = 79/438 (18%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 +I L +++ +I + I + + EL++N+LDA + V + GG + D+ Sbjct: 7 RIEPLPPEVVAKIKSSTSIINLNRVVVELVKNALDANARTVSVTVDFHRGGC---VVEDD 63 Query: 60 GFGMTSEEIPM---AVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ E + H TSK+ +G RG L S+ ++S LT++S + N Sbjct: 64 GDGIPPAEFESDGGLGKAHHTSKLYS---ARAVYGRRGLFLASLASLSLLTVISHHVRYN 120 Query: 117 TGAQIAISGEK--------ISSVRPVAMNPGTIVEVRDLFFTIPAR---LNFLKSEQVET 165 + + SS + + GT V V DLF +P R + E Sbjct: 121 STNSVIFHHSTPIARFIPAPSSHQLSCSSHGTRVIVNDLFGNMPVRVKSRALALQKPDEF 180 Query: 166 NLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN 225 D +RR+ + + + K+ + I +G I ++L Sbjct: 181 ERQWDDLRRLLV-------SLILANDHLTKLVVSTAGKERKLMIRPHVGRPGIRGDLDLK 233 Query: 226 EKSNEITLQGYT----------------------------------------GIPTFNRG 245 ++ + G P + R Sbjct: 234 RIASILMQAGLIESQNSDSWNYVSASVPGISLRAAVSLVPSPTRKVQFISIGIDPVYPRN 293 Query: 246 NANQFYVFINGRTVQDKFILSTIRTAYAETIP--------LGRYPVVVLLLEI-DPRQVD 296 + + Y IN F ++ P + ++P+ + +++ DPR++ Sbjct: 294 STDLLYSEINRLFALSDFGAVEAAPVSSDGHPGPRFTSKAVNKWPMFYIRIDVDDPRELF 353 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLP 356 H +I + ++ + + + + G+ + K +S +P Sbjct: 354 EEGHEVVPESNQSVQRLI-DVLVAMMSEFLKQHGLRPRAGRQTKDVSRSASVESPGAGRS 412 Query: 357 KYATSLTNTQEKLFLQEN 374 +A S+++ +E Sbjct: 413 NFAKSVSSRDRSSIAEEA 430 Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 75/224 (33%), Gaps = 62/224 (27%) Query: 410 CAQIHQNYIISQTTDG------LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII 463 AQ+ + +I+ + DG LV++DQHAA ER E + + + + I Sbjct: 661 IAQVDRKFILVKLADGRSSRSALVLIDQHAADERCRIESLFGAMFADGHRQVQSIRIDPI 720 Query: 464 DLLEGECA--LIMEHDEDLHRLGIKAERFGPNA-----IAIREIPAILSKKN--IPQLLR 514 L +H + G+ ++ + + +P +++++ P L+ Sbjct: 721 TFDIPLMEAALFGKHADSFASWGVGYTVERKSSARAALVVVTSLPTLIAERCRLEPDLVS 780 Query: 515 DIID--------------EIIDSSTTYTLQDR---------------------IENILAT 539 D+I + D + R I ++L + Sbjct: 781 DMIRGEIWKHEENGQGALALSDQRAQRSKVHRDELGVETEGNWVDRLTSCPQGIIDLLNS 840 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 AC +I + + E L C HGRP+ + + Sbjct: 841 RACRTAIMFNDMLTAEECKSL------------CAHGRPSMVPI 872 >gi|171466335|gb|ACB46384.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 76/209 (36%), Gaps = 23/209 (11%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + P+ R TSKI+ +D +I +FGFRGEAL S Sbjct: 1 IGLFVSNNCYDLIMVYDTGHGIELADYPLLCHRFATSKITTFNDIYSIQSFGFRGEALAS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ + ++ + N TI+ DL Sbjct: 61 ISYVSRMIVISKVENQPAHLAVYMNGKLHFDPETLAAEYTDFFTNTLVSNSFTIICATDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKS--------NRYKMNF 198 F+ R N ++S + ++ ++ A + + + +F + ++ Sbjct: 121 FYADSIRRNQIRSSKASLDMQDLLMSISAANHTREYAISFISDSQATQRELQVWLDDIHT 180 Query: 199 QSTNGNFPERISQVIGEDFINNAVELNEK 227 S + I + V + Sbjct: 181 TSGMLSLISNIIESRVTALHFKPVTTRYE 209 >gi|171466315|gb|ACB46376.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 112 bits (280), Expect = 2e-22, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 15/183 (8%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ D G G+ + + R TSKI D +I +FGFRGEAL S Sbjct: 1 IGLFVSSNCYDLLMACDTGHGIERTDYSLLCHRFATSKIETFSDIYSIQSFGFRGEALSS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ I + + + TI+ V DL Sbjct: 61 ISYVSRMIVVSKTKNQPAYVAAYIDGKLHFDPKTLTPEHTDFFISTLKADSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPE 207 F+ P R N ++S + +L +++ ++ A P ++ S I + + + N + Sbjct: 121 FYAEPIRRNQIRSSKTSLDL-QELLISISAANPTREYSISFIDNPQAIQREIQSWLNDTQ 179 Query: 208 RIS 210 IS Sbjct: 180 HIS 182 >gi|154317739|ref|XP_001558189.1| hypothetical protein BC1G_03221 [Botryotinia fuckeliana B05.10] gi|150844395|gb|EDN19588.1| hypothetical protein BC1G_03221 [Botryotinia fuckeliana B05.10] Length = 542 Score = 112 bits (279), Expect = 3e-22, Method: Composition-based stats. Identities = 32/74 (43%), Positives = 49/74 (66%), Gaps = 2/74 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L ++N+IAAGEII P A+KELIEN++DA S+ +E ++ GG QITDNG Sbjct: 33 RIKALDPDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSLEVLVKDGGLKLLQITDNGH 92 Query: 62 GMTSEEIPMAVQRH 75 G+ + + ++H Sbjct: 93 GING--VAFSCKKH 104 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 27/56 (48%) Query: 277 PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 G +P L LEI+P ++DVNVHP K + F N I I I+ + S Sbjct: 118 STGGHPFTYLNLEIEPHRLDVNVHPTKREVNFLNEEEIIEKICNDIRIKLADVDKS 173 >gi|240280005|gb|EER43509.1| DNA mismatch repair protein [Ajellomyces capsulatus H143] Length = 1003 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 66/417 (15%), Positives = 130/417 (31%), Gaps = 72/417 (17%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 I+ L ++I Q+ + I + + EL++NSLDA + V + GG + D+ Sbjct: 7 SIQPLPPEVIAQLTSSIAISHLNGVVLELLKNSLDAGAKTVSINVDFPKGGC---VVEDD 63 Query: 60 GFGMTSEEI---PMAVQRH---------CT----SKISDDFSNIHTFGFRGEALPSIGAV 103 G G+ E + H T SK + +G +G L S+ ++ Sbjct: 64 GHGILPAEFLEGSNLAKLHRAWFITMRPSTCADSSKFNSQHEV---YGRKGVFLASLVSL 120 Query: 104 SHLTLMSRPPQNNTGAQIAISGEK--------ISSVRPVAMNPGTIVEVRDLFFTIPAR- 154 + + + SR +T + + + + GT V V DLF +P R Sbjct: 121 ALVIITSRHESASTTNTVMYHHARAISILTPAPLQHEINSRDHGTRVTVTDLFGNLPVRV 180 Query: 155 -------LNFLKSEQVE--TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNF 205 ++ I + K+ + ST N Sbjct: 181 KHRALSLRTSQDLDREWDALKHILTAMLLAFQKRVKLVVSDSTKTKKLVIRASDPPFDNS 240 Query: 206 PERISQVIGEDFINN-----------AVELNEKSNEITLQGYTG---------------- 238 + + + V + +++ I +Q Sbjct: 241 SGTLDLIRIRSILMQAGYVMARDFQSWVTASARTSGIEVQSAISLQPAPTKQVQFISFGI 300 Query: 239 IPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVN 298 P F + NAN+ + R K R + ++P+ + ++++ R ++ Sbjct: 301 NPIFPQSNANRTSSEGDARASNKKAPCWRGRYMGK---SINKWPMFCIRIDLEERGKAID 357 Query: 299 VHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 R +P + ++ IQK + + S K +P H Sbjct: 358 RMDGSLENRQDSPNRFLDVLVAMIQKFLEEYHFLPRSGAGAKRSHQPQSPTSPVEHQ 414 Score = 100 bits (248), Expect = 9e-19, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 72/223 (32%), Gaps = 62/223 (27%) Query: 423 TDGLVIVDQHAAHERLIFEKMRQDFNS-------------TKITSQTLLTPEIIDLLEGE 469 LV+VDQHAA ER E++ + ++ + +L P + E Sbjct: 720 QQNLVLVDQHAADERCRVEQLFDELCGTTTATPDSSSFCRGRVNTASLPKPISFQVSPQE 779 Query: 470 CALIMEHDEDLHRLGIKAERFGP----NAIAIREIPAILSKKN--IPQLLRDIID-EIID 522 L+ H G + + + ++PA+++++ PQL D++ EI D Sbjct: 780 GELLKSHSGYFESWGCYYSLSNSERNYHTVTVDKLPALIAERCRLEPQLAIDLLRGEIWD 839 Query: 523 SST------------------------------------------TYTLQDRIENILATM 540 I ++L + Sbjct: 840 RKDHGRRDQTSFSPTLSSGNPEAGNSENSQGEAPPTIARQSWLERISDCPKAIVDLLNSR 899 Query: 541 ACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 AC SI + E L+ ++ QC HGRP+ I + Sbjct: 900 ACRSSIMFNDILSPAECQNLISKLALCAFPFQCAHGRPSMIPI 942 >gi|195120550|ref|XP_002004787.1| GI20105 [Drosophila mojavensis] gi|193909855|gb|EDW08722.1| GI20105 [Drosophila mojavensis] Length = 489 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 14/219 (6%) Query: 364 NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE-----ESEATHYQLGIACAQIHQNYI 418 QEK ++ R + L N E E ++ Q + +I Sbjct: 271 QAQEKQHVERKRSAKLQRLRFKSEINPNQNKNAEAELQKEITKADFKRMQIIGQFNLGFI 330 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDE 478 I + D L IVDQHAA E+ FE +++ +T++ Q L P+ ++L ++ +H Sbjct: 331 IVKLEDDLFIVDQHAADEKYNFEMLQR---NTQLEHQRLTVPQTLELTAVNEMILQDHLP 387 Query: 479 DLHRLGIKAERFGP----NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY-TLQDRI 533 + G K E I + P + + + + ++I + D+ RI Sbjct: 388 VFEKNGFKFEIDAEAPPTRKIRLLGKPFSKNWEFGKEDIDELIFMLQDAPEGTVCRPSRI 447 Query: 534 ENILATMACYGSIRSGRKMQS-IEMNRLLREMEKNPNSS 571 + A+ AC S+ G+ + M RL+ +M + Sbjct: 448 RAMFASRACRKSVMVGKALNRTTTMRRLITQMGEIEQPW 486 >gi|167010884|ref|ZP_02275815.1| DNA mismatch repair protein [Francisella tularensis subsp. holarctica FSC200] Length = 83 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 53/80 (66%) Query: 515 DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 +I E+I T +++ + +ILAT++C+ ++R+ K+ EMN LLR+ME NS QCN Sbjct: 2 NIATELISLFKTKSVEFYLNHILATVSCHAAVRANDKLSIPEMNHLLRQMETVENSGQCN 61 Query: 575 HGRPTFIKLKLSDIEKLFGR 594 HGRPT++KL + ++ F R Sbjct: 62 HGRPTWVKLNFAQLDSFFLR 81 >gi|159468113|ref|XP_001692227.1| hypothetical protein CHLREDRAFT_101121 [Chlamydomonas reinhardtii] gi|158278413|gb|EDP04177.1| predicted protein [Chlamydomonas reinhardtii] Length = 193 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 69/189 (36%), Gaps = 25/189 (13%) Query: 408 IACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLE 467 Q + +I++ + IVDQHAA E+ FE++++ T+ + LL Sbjct: 2 QVLGQFNLGFILAAHGRDVFIVDQHAADEKTTFERLQRSVALTRQPLLAPMPLPPGLLLP 61 Query: 468 GECALIMEHDEDLHRLGIKAERFGPNAIAIREIPA--------------ILSKKNIPQLL 513 + LI EH + R G ++ PA + Sbjct: 62 LDQLLIREHIDVFRRNGFDF---------VQRTPAGRLVPVPSPAPAPAPAPAPLSLAFV 112 Query: 514 RDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 I + S R+ +LA+ AC SI GR + +M R+L + + C Sbjct: 113 --IYSPVRVRSPPPNPDPRVRAMLASRACRSSIMVGRPLDRPQMRRVLDRLAELRQPWNC 170 Query: 574 NHGRPTFIK 582 HGRPT Sbjct: 171 PHGRPTMRH 179 >gi|242050106|ref|XP_002462797.1| hypothetical protein SORBIDRAFT_02g032160 [Sorghum bicolor] gi|241926174|gb|EER99318.1| hypothetical protein SORBIDRAFT_02g032160 [Sorghum bicolor] Length = 786 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 22/186 (11%) Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLL-TPEIIDLLEGECALIMEHDEDLHRLGIK 486 DQHAA ER+ E +R S + + L + E + L E L ++ E + + G Sbjct: 563 AFDQHAADERIRLEDLRSKVLSEEGHGVSYLDSEEELSLPETGFQLFQKYAEQIQKWGWI 622 Query: 487 AER-------FGPN---------AIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQ 530 F N + + +P IL K + L + I ++ ++ + + Sbjct: 623 ISSGSNSSESFKKNMNVLKRQVRLVTLVAVPCILGVKLTGKDLMEFIWQLDETDGSSDIP 682 Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPT---FIKLK--L 585 + IL AC G+I G + E ++ E++ QC HGRPT + + Sbjct: 683 PAVLRILNFKACRGAIMFGDSLLPSECCLIIEELKATSLCFQCAHGRPTTAPILNVTALH 742 Query: 586 SDIEKL 591 ++ +L Sbjct: 743 EELARL 748 >gi|319411837|emb|CBQ73880.1| related to MLH3-insertion and deletion mismatch repair protein [Sporisorium reilianum] Length = 848 Score = 111 bits (277), Expect = 4e-22, Method: Composition-based stats. Identities = 56/326 (17%), Positives = 112/326 (34%), Gaps = 49/326 (15%) Query: 301 PAKSYIR--FRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKY 358 P+K + + I F S+ KA+ S S + F Q +++ P+ Sbjct: 510 PSKRQLAAALDDSASIDEFEDPSLDKALA----SIPSPSGVSISDPFRQSRFFESNRPR- 564 Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 + L T + F E + + + ++ ++ G + Sbjct: 565 -SPLKRTFNRSFHDEGPDVHSAASQRKNLELAITRSDLQTADVLDQVDGKFILCSTSSSS 623 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNST---KITSQTLLTPEIIDLLEGECALIME 475 S L +DQHAA ER E++ Q + S + L + + + + L+ Sbjct: 624 SSALNPVLFCIDQHAADERYRLERLLQQYASDCAAGTAAHPLPSTFTLGIAVQQYELVSG 683 Query: 476 HDE---DLHRLGIKAER-------FGPNAIAIREIPAILS------------KKNIPQLL 513 + DL RLG + G + + IP +L + + Sbjct: 684 NASVRSDLQRLGWSIKEVVLVHAALGHAQMDLDGIPHVLKDKALTDRGRVKDQDLLQSAF 743 Query: 514 RDIIDEIIDSSTT----------------YTLQDRIENILATMACYGSIRSGRKMQSIEM 557 + ++E+ ST+ ++ + +++ + AC +I + Sbjct: 744 ANCLEEVAALSTSLSRLSAVEKTDWLTISRSIPTSLMDVIKSTACRSAIMFNDPLSREAS 803 Query: 558 NRLLREMEKNPNSSQCNHGRPTFIKL 583 RL+R + + QC HGRP+ + L Sbjct: 804 ERLVRRLGECKFPFQCAHGRPSLVPL 829 >gi|171466357|gb|ACB46395.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 77/209 (36%), Gaps = 23/209 (11%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + ++ + D G G+ + P+ R TSKI+ +D +I +FGFRGEAL S Sbjct: 1 IGLFVSNNCYDLIMVYDTGHGIELADYPLLRHRFATSKITTFNDIYSIQSFGFRGEALAS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ + ++ + N TI+ V DL Sbjct: 61 ISYVSRMIVISKVENQPAHLAVYMNGKLHFDPETLAAEYTDFFTNTLVSNSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKS--------NRYKMNF 198 F+ R N ++S + ++ ++ A + + + +F + ++ Sbjct: 121 FYADSIRRNQIRSSKASLDMQDLLMSISAANHTREYAISFISDSQAIQRELQAWLDDIHT 180 Query: 199 QSTNGNFPERISQVIGEDFINNAVELNEK 227 S + I + V + Sbjct: 181 TSGMLSLISNIIESGVTALHFKPVTTRYE 209 >gi|332865550|ref|XP_003318555.1| PREDICTED: postmeiotic segregation increased 4-like protein-like [Pan troglodytes] Length = 397 Score = 110 bits (276), Expect = 5e-22, Method: Composition-based stats. Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 4/138 (2%) Query: 45 VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGA 102 + G +++ NG+G+ E+ +H T KI + D + TFGFRGEAL S+ A Sbjct: 57 KLKDYGVDLIEVSGNGYGVEEEKFEGLTLKHHTFKIQEFADVPQVETFGFRGEALSSLCA 116 Query: 103 VSHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKS 160 +S +T+ + G ++ + KI P GT V V+ LF T+P R F ++ Sbjct: 117 LSDVTISTCHVSAKVGTRLVFDHDGKIIQKTPYPHPRGTTVSVKQLFSTLPVRHKEFQRN 176 Query: 161 EQVETNLITDVIRRMAIA 178 + + R Sbjct: 177 IKKKRACFPFAFCRDCQF 194 >gi|1304126|dbj|BAA07515.1| PMS8 [Homo sapiens] gi|1407581|dbj|BAA07475.1| hPMS8 [Homo sapiens] gi|119596965|gb|EAW76559.1| hCG2023604, isoform CRA_a [Homo sapiens] Length = 98 Score = 110 bits (276), Expect = 6e-22, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 6/79 (7%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++ NG G Sbjct: 19 IKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 78 Query: 63 MTSEEIPMAVQRHCTSKIS 81 + E SK++ Sbjct: 79 VEEENFEGL------SKLT 91 >gi|322701669|gb|EFY93418.1| MutL-like protein [Metarhizium acridum CQMa 102] Length = 566 Score = 110 bits (275), Expect = 7e-22, Method: Composition-based stats. Identities = 83/446 (18%), Positives = 157/446 (35%), Gaps = 39/446 (8%) Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 + + + VA PGT + V DLFF+IP R +S E N I D++ R +I V FT Sbjct: 8 QPAEPKGVAGRPGTQITVEDLFFSIPTRRRAFRSYSDEFNKIIDMVGRYSIHCQGVGFTC 67 Query: 187 STIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYT-GIPTFNRG 245 ++ QS +R+ Q+ G N V+ + + + Sbjct: 68 KKAGEASNSLSIQSQATTL-DRVRQIYGGSVANELVDFSASDARWGFKAHVLATNANYHI 126 Query: 246 NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSY 305 F +FIN R+V+ + I Y +P G +P + L LEIDP +VDVNVHP K Sbjct: 127 KKTTFLLFINNRSVESANVKKAIEQTYLNFLPKGGHPFIYLSLEIDPARVDVNVHPTKRE 186 Query: 306 IRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNT 365 + F N I + + ++ + S + + + + + P +T Sbjct: 187 VHFLNEDEILHAVCTELESRLANVDTSRTFKTQTLLPGAKPVAESIDENQPSPRIMVTGK 246 Query: 366 QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG 425 + + R T + ++++ + +E L + ++ T Sbjct: 247 RRRNSNDLVRTDTYARKITTMFSHADSGEASKEKSTEEEPLAVPENIEYETNDREMTICR 306 Query: 426 LVIVDQHAAHERLIF-----EKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDL 480 L + + + R E + L + E Sbjct: 307 LKSIKELRSEVRDNIHHDLTEIFASHTFVGIVDDSRRLAAIQSGVRLYLVDYGHTCFEYF 366 Query: 481 HRLGI-KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDS--------STTYTLQD 531 +++G+ FG IR PA+ LRD++ ++ + ++ Sbjct: 367 YQVGLTDFGNFG----VIRFSPALK--------LRDLLQMAAETEKKVLGAADHDFPVEK 414 Query: 532 RIENILATMACYGSIRSGRKMQSIEM 557 ++ + + + ++ EM Sbjct: 415 IVDKV-----------ANQLIERREM 429 >gi|302908156|ref|XP_003049804.1| hypothetical protein NECHADRAFT_89673 [Nectria haematococca mpVI 77-13-4] gi|256730740|gb|EEU44091.1| hypothetical protein NECHADRAFT_89673 [Nectria haematococca mpVI 77-13-4] Length = 837 Score = 110 bits (274), Expect = 8e-22, Method: Composition-based stats. Identities = 62/415 (14%), Positives = 130/415 (31%), Gaps = 90/415 (21%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M IR+L + ++++I + I + L+ NSLDA + +V I G+ + D+G Sbjct: 1 MTIRQLPQDVVDKIKSSVNITSLNGVACGLLANSLDAGAFKVNISI-DYGRGNCTVEDDG 59 Query: 61 FGMTSEEIPMA---VQRHCTSKISDDFSNIHTFGFRGEALPSIGAV----SHL------- 106 G+ +E A + H TSK PS ++ Sbjct: 60 SGIPPDEFKDAGGLGKLHHTSKF-----------------PSRSSIHGKHGDFLASLATL 102 Query: 107 ---TLMSRPPQNNTGAQIAISGEKISSVR--------PVAMNPGTIVEVRDLFFTIPARL 155 ++ S + I I K+ + V+ + GT V VRDLF ++P R+ Sbjct: 103 SLLSITSHHQSRISHNSITIHNSKVLARHLPSPPELRLVSFDHGTRVTVRDLFGSMPVRV 162 Query: 156 NFLKS-------EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPER 208 S ++ + L+ +V+ + + + + R S + + Sbjct: 163 KQRASLTERPVLDKEWSKLVREVLAMLLAWPSGIHVSIKNTAAQRELRFRPSDKTDIVFK 222 Query: 209 I------SQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYV---------- 252 + + I+ V ++ ++++G + + Sbjct: 223 TSRLLMQASLADSSDIDCWVPISASCGPVSVKGCICTNPVATRRSQFISLGIHPIMNEFG 282 Query: 253 ----------------------FINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 N R ++ + R+P+ L + I Sbjct: 283 TDVLYEEINRVFSNSSFGVIDGDENKRPEDSPKLVGFSSKELRSRKAIERWPMFYLKITI 342 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF 345 P D++ + + + + I + + + + K V S F Sbjct: 343 -PDFDDLDGSD-RLESQGQTLSAILDLLKATCYGFLKKHHFRPRKVRLSPDESVF 395 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 73/189 (38%), Gaps = 24/189 (12%) Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT-------PEIIDLLEGECA 471 + + LV++DQHA ER E + D+ +++ +L P + ++ E + Sbjct: 619 PGKQSSALVMLDQHAVDERCRLEDLMTDYFVRDESTKQVLPTTEPLERPLVFEIPLQEHS 678 Query: 472 LIMEHDEDLHRLGIKA------ERFGPNAIAIREIPAILSKKN--IPQLLRDIIDEIIDS 523 L+ ++ + GI P + + +P + ++ P+LL D++ I Sbjct: 679 LLDQNRDRFAAWGIVYQTPAPRSPSQPRKVVVTALPPSIMERCRLEPRLLIDLLRTEIWR 738 Query: 524 STTYTLQ------DRIENILATM--AC-YGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 S + + + C G+I + E +L+ + + QC Sbjct: 739 SVDEDVPLSQPSGSDHDKSWVSRFHGCPRGAIMFNDVLSVEECEQLVSRLSRCVFPFQCA 798 Query: 575 HGRPTFIKL 583 HGRP+ L Sbjct: 799 HGRPSMAPL 807 >gi|261197159|ref|XP_002624982.1| DNA mismatch repair protein [Ajellomyces dermatitidis SLH14081] gi|239595612|gb|EEQ78193.1| DNA mismatch repair protein [Ajellomyces dermatitidis SLH14081] Length = 958 Score = 110 bits (274), Expect = 8e-22, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 19/170 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSR--VETVIAGGGKSFFQITDN 59 IR L ++ ++ + I + + EL++NSLDA + + GG + + D+ Sbjct: 7 SIRPLPSGVVAKLKSSIAISNLNGVVLELLKNSLDARAQTVSINVNFQRGGCA---VEDD 63 Query: 60 GFGMTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ E + H TS + +G +G L S+ +++ +T+ S + Sbjct: 64 GQGILPAEFMEGGNLAKLHHTSGFNSPH---QVYGRKGAFLASLVSLALVTITSHHESAS 120 Query: 117 TGAQIAISGEK--------ISSVRPVAMNPGTIVEVRDLFFTIPARLNFL 158 T + K + + GT V V DLF P R+ Sbjct: 121 TTNTVVYHHAKSISRLTPAPLQHELDSRDHGTRVTVTDLFGNFPVRVKHR 170 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 65/208 (31%), Gaps = 63/208 (30%) Query: 422 TTDGLVIVDQHAAHERLIFEKMR-------------QDFNSTKITSQTLLTPEIIDLLEG 468 LV+VDQHAA ER E++ F + + +L P + Sbjct: 726 RQQNLVLVDQHAADERCRIEQLFVELCGTAATTSDPSSFCQNRGNTSSLPKPISFQVSPQ 785 Query: 469 ECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKN--IPQLLRDIIDEIID 522 E L+ H + G + + I ++P +++++ P+L D++ I Sbjct: 786 EGELLKSHSDYFEFWGCYYTLSPSERDYHTVTIDKVPTLIAERCRVEPKLAIDLLRNEIW 845 Query: 523 SSTTYTLQDR--------------------------------------------IENILA 538 + +DR I ++L Sbjct: 846 ERKDHGRKDRKLPPQTLCSGIPEAGNSEKSPNDEVQPTIARHSWLELISDCPKTIIDLLI 905 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEK 566 + AC SI + +E L+ + + Sbjct: 906 SRACRSSIMFNDCLSRVECENLISRLAQ 933 >gi|327294793|ref|XP_003232092.1| hypothetical protein TERG_07710 [Trichophyton rubrum CBS 118892] gi|326466037|gb|EGD91490.1| hypothetical protein TERG_07710 [Trichophyton rubrum CBS 118892] Length = 1000 Score = 110 bits (274), Expect = 9e-22, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 15/163 (9%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR L + QI + I+ + I +LI+NSLDA +S V + K + D+G G Sbjct: 8 IRVLPRDVAGQIRSSSIVTSLNGVIVDLIKNSLDANASAVMVNV-DFQKGTCTVEDDGIG 66 Query: 63 MTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 + E + H TSK +G +G + S+ +++ +T+ SR Sbjct: 67 IPPNEFHENGGLGKLHHTSKFDT---TGQVYGRKGIFISSLISMALVTITSRNISFQETN 123 Query: 120 QIAISGEKI--------SSVRPVAMNPGTIVEVRDLFFTIPAR 154 + K+ + GT V V DLF +P R Sbjct: 124 SVIFRHSKLISRLCPAPIQHDLLHPQHGTRVAVNDLFSNLPVR 166 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 74/210 (35%), Gaps = 46/210 (21%) Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDFN----STKITSQTLLTPEIIDLLEGECALIME 475 + + LV+VDQHAA ER E++ S + + L TP +L E L Sbjct: 732 REGEEVLVLVDQHAADERCRVEELFTALCNLSPSGNVDTTNLPTPISFRILSQEARLFEA 791 Query: 476 HDEDLHRLGIKAERF----GPNAIAIREIPAILSKKN--IPQLLRDII-DEIIDSSTTYT 528 G E G ++ +R +P +++++ P+L D++ E+ D Sbjct: 792 RSGYFSSWGCLYEVLREAEGYYSLVVRGLPTLIAERCRVEPRLAIDMLRSEVWDQPEISK 851 Query: 529 L-----------------------------------QDRIENILATMACYGSIRSGRKMQ 553 ++ +++ + +C +I + Sbjct: 852 PSIRSALEECGSQGFVEKGLGKTETHHCWLQRIGGCPKKMVDLIVSRSCRSAIMFNDVLS 911 Query: 554 SIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 E L+ + K QC HGRP+ + + Sbjct: 912 ISECQSLVSRLAKCAFPFQCAHGRPSMVPI 941 >gi|327351629|gb|EGE80486.1| DNA mismatch repair protein [Ajellomyces dermatitidis ATCC 18188] Length = 1005 Score = 110 bits (274), Expect = 9e-22, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 19/170 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSR--VETVIAGGGKSFFQITDN 59 IR L ++ ++ + I + + EL++NSLDA + + GG + + D+ Sbjct: 7 SIRPLPSGVVAKLKSSIAISNLNGVVLELLKNSLDARAQTVSINVNFQRGGCA---VEDD 63 Query: 60 GFGMTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ E + H TS + +G +G L S+ +++ +T+ S + Sbjct: 64 GQGILPAEFMEGGNLAKLHHTSGFNSPH---QVYGRKGAFLASLVSLALVTITSHHESAS 120 Query: 117 TGAQIAISGEK--------ISSVRPVAMNPGTIVEVRDLFFTIPARLNFL 158 T + K + + GT V V DLF P R+ Sbjct: 121 TTNTVVYHHAKSISRLTPAPLQHELDSRDHGTRVTVTDLFGNFPVRVKHR 170 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 73/225 (32%), Gaps = 63/225 (28%) Query: 422 TTDGLVIVDQHAAHERLIFEKMR-------------QDFNSTKITSQTLLTPEIIDLLEG 468 LV+VDQHAA ER E++ F + + +L P + Sbjct: 726 RQQNLVLVDQHAADERCRIEQLFVELCGTAATTSDPSSFCQNRGNTSSLPKPISFQVSPQ 785 Query: 469 ECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKN--IPQLLRDIIDEIID 522 E L+ H + G + + I ++P +++++ P+L D++ I Sbjct: 786 EGELLKSHSDYFEFWGCYYTLSPSERDYHTVTIDKVPTLIAERCRVEPKLAIDLLRNEIW 845 Query: 523 SSTTYTLQDR--------------------------------------------IENILA 538 + +DR I ++L Sbjct: 846 ERKDHGRKDRKLPPRTLCSGIPEAGNSEKSPNDEVQPTIARHSWLELISDCPKTIIDLLI 905 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + AC SI + +E L+ + QC HGRP+ I + Sbjct: 906 SRACRSSIMFNDCLSRVECENLISRLAVCAFPFQCAHGRPSMIPI 950 >gi|239606597|gb|EEQ83584.1| DNA mismatch repair protein [Ajellomyces dermatitidis ER-3] Length = 1005 Score = 110 bits (274), Expect = 9e-22, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 19/170 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSR--VETVIAGGGKSFFQITDN 59 IR L ++ ++ + I + + EL++NSLDA + + GG + + D+ Sbjct: 7 SIRPLPSGVVAKLKSSIAISNLNGVVLELLKNSLDARAQTVSINVNFQRGGCA---VEDD 63 Query: 60 GFGMTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ E + H TS + +G +G L S+ +++ +T+ S + Sbjct: 64 GQGILPAEFMEGGNLAKLHHTSGFNSPH---QVYGRKGAFLASLVSLALVTITSHHESAS 120 Query: 117 TGAQIAISGEK--------ISSVRPVAMNPGTIVEVRDLFFTIPARLNFL 158 T + K + + GT V V DLF P R+ Sbjct: 121 TTNTVVYHHAKSISRLTPAPLQHELDSRDHGTRVTVTDLFGNFPVRVKHR 170 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 73/225 (32%), Gaps = 63/225 (28%) Query: 422 TTDGLVIVDQHAAHERLIFEKMR-------------QDFNSTKITSQTLLTPEIIDLLEG 468 LV+VDQHAA ER E++ F + + +L P + Sbjct: 726 RQQNLVLVDQHAADERCRIEQLFVELCGTAATTSDPSSFCQNRGNTSSLPKPISFQVSPQ 785 Query: 469 ECALIMEHDEDLHRLGIKA----ERFGPNAIAIREIPAILSKKN--IPQLLRDIIDEIID 522 E L+ H + G + + I ++P +++++ P+L D++ I Sbjct: 786 EGELLKSHSDYFEFWGCYYTLSPSERDYHTVTIDKVPTLIAERCRVEPKLAIDLLRNEIW 845 Query: 523 SSTTYTLQDR--------------------------------------------IENILA 538 + +DR I ++L Sbjct: 846 ERKDHGRKDRKLPPQTLCSGIPEAGNSEKSPNDEVQPTIARHSWLELISDCPKTIIDLLI 905 Query: 539 TMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + AC SI + +E L+ + QC HGRP+ I + Sbjct: 906 SRACRSSIMFNDCLSRVECENLISRLAVCAFPFQCAHGRPSMIPI 950 >gi|255030819|ref|ZP_05302770.1| DNA mismatch repair protein [Listeria monocytogenes LO28] Length = 161 Score = 110 bits (274), Expect = 1e-21, Method: Composition-based stats. Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 1/162 (0%) Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 + E EE Q+H YI +Q +GL I+DQHAA ER+ +E Sbjct: 1 METMPPYEPQAEQEEHSKERIPKMYPIGQMHATYIFAQNENGLYIIDQHAAQERIKYEFY 60 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 R+ Q LL P +++ E + E L +G+ E FG N+ IR P Sbjct: 61 REKIGEVSRELQELLVPIVLEFPADEYVRLEEQKAKLEEVGVFLENFGQNSFIIRAHPTW 120 Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 K ++LR+IIDE + + + ++ E+ M+C S Sbjct: 121 FPKDQEEEMLREIIDEALSAP-SISIHKLREDTAIMMSCKKS 161 >gi|294890797|ref|XP_002773319.1| DNA mismatch repair protein pms1, putative [Perkinsus marinus ATCC 50983] gi|239878371|gb|EER05135.1| DNA mismatch repair protein pms1, putative [Perkinsus marinus ATCC 50983] Length = 423 Score = 110 bits (274), Expect = 1e-21, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 85/218 (38%), Gaps = 9/218 (4%) Query: 366 QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDG 425 ++ + + R S + + ++ Q+ + +II + Sbjct: 189 KQSSDVYKQRASIVGESMAKVHLKLDPQHITINFNRNMFKSLTDVRQVDRKFIIGRFGGT 248 Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L+ +DQHAA ER+ E++ S I T ++ L + +L+ + +L G Sbjct: 249 LLAIDQHAAGERVGLERLMS---SAGILETQPTTGTLLVLKPTDASLLHAREAELEEHGW 305 Query: 486 KAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS 545 + G A+ + +P I + D++ + ++ + +T AC+ + Sbjct: 306 RFAIIGARAV-VTGVPKI-RIGTLTASPYDLL----PWANELPFPAKLHYMYSTTACHQA 359 Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ G M E++ L+ + QC HGRPT + Sbjct: 360 VKFGDSMSPSEVSALVSSLGICELPFQCAHGRPTVYPI 397 >gi|74706325|sp|Q13670|PM2PB_HUMAN RecName: Full=Putative postmeiotic segregation increased 2-like protein 11; AltName: Full=PMS2-related protein 6; AltName: Full=Putative postmeiotic segregation increased 2 pseudogene 11 gi|1061426|gb|AAA97460.1| hPMSR6 [Homo sapiens] Length = 270 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 39/67 (58%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ ++ + G +++ NG G Sbjct: 161 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGMDLIEVSGNGCG 220 Query: 63 MTSEEIP 69 + E Sbjct: 221 VEEENFE 227 >gi|50311665|ref|XP_455859.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49644995|emb|CAG98567.1| KLLA0F17347p [Kluyveromyces lactis] Length = 610 Score = 109 bits (273), Expect = 1e-21, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 18/229 (7%) Query: 19 IIERPSIAIKELIENSLDAESSRVETVIAG--GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 +I+ P A+K+LIENS+DA ++V I GG + Q+ D+G G++ ++ +H Sbjct: 19 VIDNPVSAVKQLIENSIDANCTKVLIKIDESSGGCRYIQLNDDGNGISVQKRSSVFVKH- 77 Query: 77 TSKISDDFSNIHTFGFRGEALPSIGAVS----HLTLMSRPPQNNTGAQI---AISGEKIS 129 D + G++G AL +IG + + +++R N + I + Sbjct: 78 ---FKTDGKSCKRIGYKGRALYNIGKTASKKGSIEVITRTISENVAVKWSPPRIRINETI 134 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 V PGT V +RDL + K ++ +I D++ ++ + + F+ + Sbjct: 135 RFSKVVNPPGTTVILRDLMTGSKSSR-LAKKDKNYIKMIRDMLFHFSLIHKHICFSCQLV 193 Query: 190 K----SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 + + + + G + +R+SQ N + E +EI L Sbjct: 194 NPLRDGSIKTLEYVARFGKYEDRMSQFKKHVTKQNLIVEFEHFDEIELS 242 >gi|238491946|ref|XP_002377210.1| DNA mismatch repair protein (Mlh3), putative [Aspergillus flavus NRRL3357] gi|220697623|gb|EED53964.1| DNA mismatch repair protein (Mlh3), putative [Aspergillus flavus NRRL3357] Length = 670 Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 74/191 (38%), Gaps = 33/191 (17%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKIT-----SQTLLTPEIIDLLEGECALIMEHDEDL 480 LV++DQHAA ER E++ +++ + + L P I ++ E + + + Sbjct: 438 LVLIDQHAADERCRVERLFEEYFTPPVEGSRQVQTVTLEPIIFEIPVTEAYVFGRYKQFF 497 Query: 481 HRLGIKAE----RFGPNAIA-IREIPAILSKKN------IPQLLR--------------- 514 G++ +A + +P +++++ + L+R Sbjct: 498 EFWGVEYTVEQGPADKSAYIFVHTLPMLIAERCRLEPELVTNLIRGEIWRREENGRGPEN 557 Query: 515 --DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 ++++ + I +L + AC +I ++ E L+ + + Q Sbjct: 558 RVSVLEQDRWAEQLDICPQGIIELLNSRACRTAIMFNDELTIGECQSLVENLARCVFPFQ 617 Query: 573 CNHGRPTFIKL 583 C HGRP+ I L Sbjct: 618 CAHGRPSMIPL 628 Score = 87.4 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 18/99 (18%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 +I L +++ ++ + I + I EL++N+LDA + V ++ GG + DN Sbjct: 7 RIEPLPPEVVAKLKSSTSITHLNGVIVELVKNALDANAHTVSVMVDFQRGGCK---VEDN 63 Query: 60 GFGMTSEEI-------------PMAVQRHCTSKISDDFS 85 G G+ E + + H TS +D Sbjct: 64 GDGIQPTEFKPDGGLGKAHLQQELGLGNHGTSVTVNDLF 102 >gi|171466341|gb|ACB46387.1| Mlh1 [Giardia intestinalis] Length = 281 Score = 108 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 78/209 (37%), Gaps = 23/209 (11%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS--DDFSNIHTFGFRGEALPS 99 + +++ + D G G+ + P+ R TS+I+ +D +I +FGFRGEAL S Sbjct: 1 IGLLVSNNCYDLIMVYDTGHGIELADYPLLCHRFATSEITTFNDIYSIQSFGFRGEALAS 60 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAIS------------GEKISSVRPVAMNPGTIVEVRDL 147 I VS + ++S+ + ++ + N TI+ V DL Sbjct: 61 ISYVSRMIVISKVENQPAHLAVYMNGKLHFDPETLAAEYTDFFTNTLVSNSFTIICVTDL 120 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKS--------NRYKMNF 198 F+ R N ++S + ++ ++ A + + + +F + ++ Sbjct: 121 FYADSIRRNQIRSSKASLDMQDLLMSISAANHTREYAISFISDSQAIQRELQAWLDDIHT 180 Query: 199 QSTNGNFPERISQVIGEDFINNAVELNEK 227 S + I + V + Sbjct: 181 TSGMLSLISNIIESGVTALHFKPVTTRYE 209 >gi|119188093|ref|XP_001244653.1| hypothetical protein CIMG_04094 [Coccidioides immitis RS] Length = 995 Score = 108 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 55/358 (15%), Positives = 111/358 (31%), Gaps = 58/358 (16%) Query: 283 VVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMI 342 ++ + +++N ++ + I I S ++ + + I Sbjct: 589 IIQWTDPLTKEALNINERTGQTLPTNGSKRIPFRSISLSSRQPRTYRADGSRPSSPTPWI 648 Query: 343 SSFHQDNAPKTHLP--KYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 S Q P + S+ QEN + L + D + + Sbjct: 649 DSVLQKWKNPVFGPFERPIPSIRPATPNQLEQENTRLSGVLPIAADFENACSSSFTGRLT 708 Query: 401 ATHYQLGIACAQIHQNYIISQTTDGL----------VIVDQHAAHERLIFEKMRQDFN-- 448 + AQ+ +I+ + + L V+VDQHAA ER+ E++ + Sbjct: 709 KSGLTNAQIVAQVDNKFILLRMIESLGDKSGFQRILVLVDQHAADERIRVERLFDELCGS 768 Query: 449 --STKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE-----RFGPNAIAIREIP 501 S + + L P + + E L + G F + + +P Sbjct: 769 SPSHTVDTTPLPEPILFKVSSEEARLFESRTDYFASWGCSYSTSRDKSFPHATVEVTTLP 828 Query: 502 AILSKKN--IPQLLRDIIDEIIDSSTTYTLQDR--------------------------- 532 ++ ++ P+L D++ I + + Sbjct: 829 TLIFERCRAEPKLAIDLLRSEIWARKDDKTTSKPKVASAASASAEEVGGGEPTSAPHWPH 888 Query: 533 --------IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 I ++L + AC +I K+ E L+ + K QC HGRP+ + Sbjct: 889 SISHCPRGIIDLLNSRACRSAIMFNDKLSKKECKELISTLAKCVFPFQCAHGRPSMVP 946 Score = 101 bits (252), Expect = 4e-19, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 18/169 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSR--VETVIAGGGKSFFQITDN 59 I L K+ QI + I + AI L++NSLDA++ + GG + + D+ Sbjct: 7 SILPLPPKVAAQIESSTSITSLNSAILGLVKNSLDADAQTVAITVDFQKGGCA---VEDD 63 Query: 60 GFGMTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ + E + H TSK++ + +G +G LPS+ +++ LT+ SR ++ Sbjct: 64 GEGIPASEFEEGGGLGKLHHTSKLNS-LREV--YGCKGVFLPSLASLALLTVTSRHGPDS 120 Query: 117 TGAQIAISGEKI-------SSVRPVAMNPGTIVEVRDLFFTIPARLNFL 158 + + A GT V V +LF +P R+ Sbjct: 121 STNSVTYHHSTTISRLCPAPPHHEFASEHGTKVTVTNLFGNLPVRVKHR 169 >gi|218515115|ref|ZP_03511955.1| DNA mismatch repair protein [Rhizobium etli 8C-3] Length = 82 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 45/82 (54%), Positives = 60/82 (73%) Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 M + ++ +AV+RHCTSKIS+ +I T GFRGEALPSIG+V+ L + SR + G +IA Sbjct: 1 MEATDLELAVRRHCTSKISETLEDIRTLGFRGEALPSIGSVARLNIASRRRDSAGGHEIA 60 Query: 123 ISGEKISSVRPVAMNPGTIVEV 144 ++G KI +RP A NPGTIVEV Sbjct: 61 VAGGKIVHIRPAAANPGTIVEV 82 >gi|169773913|ref|XP_001821425.1| DNA mismatch repair protein (Mlh3) [Aspergillus oryzae RIB40] gi|83769286|dbj|BAE59423.1| unnamed protein product [Aspergillus oryzae] Length = 929 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 74/191 (38%), Gaps = 33/191 (17%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKIT-----SQTLLTPEIIDLLEGECALIMEHDEDL 480 LV++DQHAA ER E++ +++ + + L P I ++ E + + + Sbjct: 697 LVLIDQHAADERCRVERLFEEYFTPPVEGSRQVQTVTLEPIIFEIPVTEAYVFGRYKQFF 756 Query: 481 HRLGIKAE----RFGPNAIA-IREIPAILSKKN------IPQLLR--------------- 514 G++ +A + +P +++++ + L+R Sbjct: 757 EFWGVEYTVEQGPADKSAYIFVHTLPMLIAERCRLEPELVTNLIRGEIWRREENGRGPEN 816 Query: 515 --DIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 ++++ + I +L + AC +I ++ E L+ + + Q Sbjct: 817 RVSVLEQDRWAEQLDICPQGIIELLNSRACRTAIMFNDELTIGECQSLVENLARCVFPFQ 876 Query: 573 CNHGRPTFIKL 583 C HGRP+ I L Sbjct: 877 CAHGRPSMIPL 887 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 51/252 (20%), Positives = 91/252 (36%), Gaps = 29/252 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 +I L +++ ++ + I + I EL++N+LDA + V ++ GG + DN Sbjct: 7 RIEPLPPEVVAKLKSSTSITHLNGVIVELVKNALDANAHTVSVMVDFQRGGCK---VDDN 63 Query: 60 GFGMTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ E + H TSK D +G +G L S+ A+S LT+ S +++ Sbjct: 64 GDGIQPTEFKPDGGLGKAHHTSKYHTD---TGVYGQKGLFLASLAALSLLTITSHHVRHS 120 Query: 117 TGAQIAISGEK--------ISSVRPVAMNPGTIVEVRDLFFTIPAR---LNFLKSEQVET 165 I + N GT V V DLF +P R E Sbjct: 121 NANTIMLHHSTPVARLIPAPVQQELGLGNHGTSVTVNDLFGNMPVRVKNRALALQRHDEL 180 Query: 166 NLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN 225 + D +R++ + + N K+ + + I + ++L Sbjct: 181 DRQWDELRQLLV-------SLMIANDNLTKLVIIEASKDKRIIIRSRTQNRRTDGELDLQ 233 Query: 226 EKSNEITLQGYT 237 + G Sbjct: 234 RIVSIFAQAGLI 245 >gi|149005926|ref|ZP_01829655.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP18-BS74] gi|147762282|gb|EDK69243.1| DNA mismatch repair protein HexB [Streptococcus pneumoniae SP18-BS74] Length = 104 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 46/91 (50%), Gaps = 1/91 (1%) Query: 504 LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 ++++ I + ++ D ++ + +++ + M+C SI++ ++ +LL + Sbjct: 1 MAEEEIESGIYEMCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQ 59 Query: 564 MEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + N C HGRP + SD+EK+F R Sbjct: 60 LSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 90 >gi|281204981|gb|EFA79175.1| MutL DNA mismatch repair protein [Polysphondylium pallidum PN500] Length = 1447 Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 85/228 (37%), Gaps = 7/228 (3%) Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 +A S + +++ ++E + N + H AQ+ + Sbjct: 1194 SNFAGSQVDMEQQKQIREAKQKQKIQNEELQRKMVLQNKSSDRVTREHIDNVRFIAQLDK 1253 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIME 475 Y++ ++ ++DQHA ER+ E + + + + E L E L+ E Sbjct: 1254 KYLLCESNGLFFVMDQHAVSERINLENYSRAIPNFDV----VPLNERWSLTPDEMHLMSE 1309 Query: 476 HDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIEN 535 + ++ + G K + + I + P + S+ L + + I D Sbjct: 1310 YKAEIEKYGFKW-QANKSTITLESAPKVCSQTLGVGQLHEYLSMIADREIGP--PPSFHR 1366 Query: 536 ILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 I T AC +I+ G + L++E+ K + C HGRP + + Sbjct: 1367 IRQTHACARAIKFGHNLPRERCENLMKELAKCNDPFHCAHGRPASVSM 1414 Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 3/93 (3%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTS 65 L E ++ I + I A++E++ N++D+ ++ + I +F + DNG + Sbjct: 17 LGEDVVTSIRSTLSIVSYEQALEEIVYNAIDSNATAISVTINTTTLAF-DVKDNGASIDL 75 Query: 66 EEIPMAVQRHCTSKISD--DFSNIHTFGFRGEA 96 ++ + +R+CTSK + DF ++HTFGFRGE+ Sbjct: 76 ADLKLVGERNCTSKFTTPQDFEHLHTFGFRGES 108 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 83/220 (37%), Gaps = 36/220 (16%) Query: 139 GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI--------- 189 GTIV+VR+LF +P R + + + + +A+++P +SFT Sbjct: 184 GTIVKVRELFRFVPVRRQNI-NHSSLRLSVKKKLENIALSHPNISFTLFDETKGPIFETP 242 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP-TFNRGNAN 248 +++ F S G I + I E + +S++ L GY +P N + Sbjct: 243 SDHQFLSIFSSFYGQVKANIMEFIDS------TEFSHQSHDYRLNGYLCLPTKKGHPNQS 296 Query: 249 QFYVFINGRTVQDKFILSTIRTAYAETIPLGR------------------YPVVVLLLEI 290 +F+N R V + + + Y +P+ L LE Sbjct: 297 LQLIFVNNRIVYNTKLHRIVNQLYKSFRLFNETKLAEENHTKIRKEVIDIHPMYCLFLEC 356 Query: 291 DPRQVDVNVHP-AKSYIRFRNPTIIRNFIIQSIQKAINKK 329 D + P +K+++ F+N + N + + ++K Sbjct: 357 PFTSYDRSYEPTSKTFLEFKNWQLPTNLFKGVLTRFLSKN 396 >gi|78128016|gb|ABB22297.1| DNA mismatch repair protein [Pseudomonas aeruginosa] Length = 147 Score = 108 bits (269), Expect = 4e-21, Method: Composition-based stats. Identities = 50/146 (34%), Positives = 81/146 (55%) Query: 169 TDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKS 228 +VI+R+A+A V+F + ++ R+ V G+ F+ A+ + + Sbjct: 2 QEVIKRLALARFDVAFHLRHNGKTIFALHEARDELARARRVGAVCGQAFLEQALPIEVER 61 Query: 229 NEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLL 288 N + L G+ G+PTF+R + Y ++NGR V+DK + +R AY + + GR+P VL Sbjct: 62 NGLHLWGWVGLPTFSRSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGRHPTFVLFF 121 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTII 314 E+DP VDVNVHP K +RFR+ +I Sbjct: 122 EVDPAVVDVNVHPTKHEVRFRDSRMI 147 >gi|320038066|gb|EFW20002.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira] Length = 995 Score = 108 bits (269), Expect = 4e-21, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 89/285 (31%), Gaps = 56/285 (19%) Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 + S+ QEN + L + D + + + AQ+ Sbjct: 662 PFERPIPSIRPATPNQLEQENTGLSRVLPIAADFENACSSSFTGRLTKSGLTNAQIVAQV 721 Query: 414 HQNYIISQTTDGL----------VIVDQHAAHERLIFEKMRQDFN----STKITSQTLLT 459 +I+ + + L V+VDQHAA ER+ E++ + S + + L Sbjct: 722 DNKFILLRMIESLGDKSGFQRILVLVDQHAADERIRVERLFDELCGSSPSHTVDTTPLPE 781 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAE-----RFGPNAIAIREIPAILSKKN--IPQL 512 P + + E L + G F + + +P ++ ++ P+L Sbjct: 782 PILFKVSSEEARLFESRTDYFASWGCSYSTSRDKSFPHATVEVTTLPTLIFERCRAEPKL 841 Query: 513 LRDIIDEIIDSSTTYTLQDR-----------------------------------IENIL 537 D++ I + + I ++L Sbjct: 842 AIDLLRSEIWARKDDKTTSKPKVASAASASAEEVGGGETTSAPHWPHSISHCPRGIIDLL 901 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 + AC +I K+ E L+ + K C HGRP+ + Sbjct: 902 NSRACRSAIMFNDKLSKKECKELISTLAKCVFPFHCAHGRPSMVP 946 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 18/169 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSR--VETVIAGGGKSFFQITDN 59 I L K+ QI + I + AI L++NSLDA++ + GG + + D+ Sbjct: 7 SILPLPPKVAAQIESSTSITSLNSAILGLVKNSLDADAQTVAITVDFQKGGCA---VEDD 63 Query: 60 GFGMTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ + E + H TSK++ + +G +G LPS+ +++ LT+ SR ++ Sbjct: 64 GEGIPASEFEEGGGLGKLHHTSKLNS-LREV--YGCKGVFLPSLASLALLTVTSRHGPDS 120 Query: 117 TGAQIAISGEKI-------SSVRPVAMNPGTIVEVRDLFFTIPARLNFL 158 + + A GT V V +LF +P R+ Sbjct: 121 STNSVTYHHSTTISRLCPAPPHHEFASEHGTKVTVTNLFGNLPVRVKHR 169 >gi|303316568|ref|XP_003068286.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240107967|gb|EER26141.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 995 Score = 108 bits (269), Expect = 4e-21, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 89/285 (31%), Gaps = 56/285 (19%) Query: 354 HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQI 413 + S+ QEN + L + D + + + AQ+ Sbjct: 662 PFERPIPSIRPATPNQLEQENTGLSRVLPIAADFENACSSSFTGRLTKSGLTNAQIVAQV 721 Query: 414 HQNYIISQTTDGL----------VIVDQHAAHERLIFEKMRQDFN----STKITSQTLLT 459 +I+ + + L V+VDQHAA ER+ E++ + S + + L Sbjct: 722 DNKFILLRMIESLGDKSGFQRILVLVDQHAADERIRVERLFDELCGSSPSHTVDTTPLPE 781 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAE-----RFGPNAIAIREIPAILSKKN--IPQL 512 P + + E L + G F + + +P ++ ++ P+L Sbjct: 782 PILFKVSSEEARLFESRTDYFASWGCSYSTSRDKSFPHATVEVTTLPTLIFERCRAEPKL 841 Query: 513 LRDIIDEIIDSSTTYTLQDR-----------------------------------IENIL 537 D++ I + + I ++L Sbjct: 842 AIDLLRSEIWARKDDKTTSKPKVASAASASAEEVGGGETTSAPHWPHSISHCPRGIIDLL 901 Query: 538 ATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK 582 + AC +I K+ E L+ + K C HGRP+ + Sbjct: 902 NSRACRSAIMFNDKLSKKECKELISTLAKCVFPFHCAHGRPSMVP 946 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 18/169 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSR--VETVIAGGGKSFFQITDN 59 I L K+ QI + I + AI L++NSLDA++ + GG + + D+ Sbjct: 7 SILPLPPKVAAQIESSTSITSLNSAILGLVKNSLDADAQTVAITVDFQKGGCA---VEDD 63 Query: 60 GFGMTSEEIP---MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ + E + H TSK++ + +G +G LPS+ +++ LT+ SR ++ Sbjct: 64 GEGIPASEFEEGGGLGKLHHTSKLNS-LREV--YGCKGVFLPSLASLALLTVTSRHGPDS 120 Query: 117 TGAQIAISGEKI-------SSVRPVAMNPGTIVEVRDLFFTIPARLNFL 158 + + A GT V V +LF +P R+ Sbjct: 121 STNSVTYHHSTTISRLCPAPPHHEFASEHGTKVTVTNLFGNLPVRVKHR 169 >gi|171689700|ref|XP_001909790.1| hypothetical protein [Podospora anserina S mat+] gi|170944812|emb|CAP70924.1| unnamed protein product [Podospora anserina S mat+] Length = 906 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 83/468 (17%), Positives = 162/468 (34%), Gaps = 80/468 (17%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I++L ++ QI + II + A+ L+ NSLDA S+++ + G+ + DNG Sbjct: 1 MSIQQLPRDVVAQIKSSTIITSLNTAVCGLLRNSLDARSTKINISV-DYGRGSCSVEDNG 59 Query: 61 FGMTSEEIP---MAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN 115 G+ Q H TSK S D G GE L S+G++S LT+ S Sbjct: 60 VGIPPSNFREGGGLGQLHYTSKYPPSADCH-----GKHGEFLASLGSLSLLTVTSHHRDY 114 Query: 116 NTGAQIAISGEKISSVRPVAMN--------PGTIVEVRDLFFTIPARLNFLKSEQVET-- 165 + + I + + A+ GT V VRDLF +P R+ +E Sbjct: 115 RSHNSLTIHKSNVVTRNVPALPEQRILGFSSGTRVAVRDLFGYLPVRVKQRATEMERLGT 174 Query: 166 -----NLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPER------------ 208 LI + + + +V+ + R S + + Sbjct: 175 SGYFDQLIHEAVALLLAWPGEVAVNLQDSIARRTVSLQTSPLADIEKHHLLSARDVLLRT 234 Query: 209 -----ISQVIGEDFINNAVELNEKSNEITLQGYTG----------------IPTFNRGNA 247 + ++ ++ + V + + IT++G P+ N G++ Sbjct: 235 PKLLLAASLLDQENPKSWVSIGATAPGITVRGCVSLEPAATKRVQFIALGIQPSLNEGHS 294 Query: 248 NQFYVFINGRTVQD----------------KFILSTIRTAYAETIPLGRYPVVVLLLEID 291 N Y +N + + R + R+P+ L + ++ Sbjct: 295 NFLYDEVNNVFANSSFGTIEEAGVDDDGYPQKMAGFTRKELKPRKGVDRWPMFFLQIILE 354 Query: 292 PRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS---FHQD 348 V+ R N +II + + + + K SV + K + + D Sbjct: 355 HGLGSVDADDFLDERRP-NLSIIVDLLQVMAYEFLKKHMFRPRSVHAIKQLKTGTVSGSD 413 Query: 349 NAPKTHLPKYAT-SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDP 395 A +T+ + + + +L ++ + ++ + S + Sbjct: 414 FAFETNRKSASQLPVARSASRLSVRTKASRKSTTRDTETRSASPFSSW 461 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 72/199 (36%), Gaps = 41/199 (20%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKIT--------SQTLLTPEIIDLLEGECALIMEHD 477 LVI+DQHAA ER E + +++ L DL E L++ Sbjct: 667 LVIIDQHAADERYRVEALLKEYFVPNPDDGRSLVAARTHLDKKLFFDLSRQEGELLVRFK 726 Query: 478 EDLHRLGIKAERFGPN-----AIAIREIPAILSKKN--IPQLLRDIIDE----IIDSSTT 526 G+ + + + ++ +P + ++ P+LL +++ + ++ + Sbjct: 727 RHFAYWGVIYDLTTQDQASRVTVEVQALPPSIVERCRLEPRLLVELLRNEIWKLHENPSK 786 Query: 527 ----------------------YTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 + + I ++ + AC SI + + +L++ + Sbjct: 787 QAGIVPRLPIGDEADHQWFSRFHNCPEGIIELIHSRACRSSIMFNDVLTKEQCFQLVQNL 846 Query: 565 EKNPNSSQCNHGRPTFIKL 583 QC HGRP+ + L Sbjct: 847 ATCAFPFQCAHGRPSMVPL 865 >gi|307108242|gb|EFN56483.1| hypothetical protein CHLNCDRAFT_145166 [Chlorella variabilis] Length = 561 Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats. Identities = 63/336 (18%), Positives = 128/336 (38%), Gaps = 36/336 (10%) Query: 15 AAGEIIERPSIAIKELIENSLDAESSRV--ETVIAGGGKSFFQITDNGFGMTSEEIPMAV 72 AG ++ PS A EL+ NS+D+ ++ V E IA G ++ DNG G+ + + + Sbjct: 26 RAGSVVSAPSQAAVELLANSIDSAATEVHLELDIADWGL---RVQDNGRGIPATRLGLLG 82 Query: 73 QRHCTSKISDDFSNIH-TFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISS 130 +R + T G+RGEAL ++ A + + ++SR + ++ + ++ Sbjct: 83 RRFA----ATPLPAARPTLGYRGEALAALCAAAQEVEVVSRAMDSFETHRVLLRSGQVVE 138 Query: 131 VRPV---AMNPGTIVEVRDLFFTIPARLNFLKSE--QVETNLITDVIRRMAIAYPKVSFT 185 + GT V +R LFF P R L + Q E + + ++A+ ++FT Sbjct: 139 QGLALDQSSRQGTCVTIRGLFFNQPVRRKALLTAGLQREVDRCKQAVIQLALLRSHITFT 198 Query: 186 FSTIKSNRYKMNFQSTNG-NFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNR 244 + + G + + + + +G + AV + GY +P Sbjct: 199 CFDRGRKAFLLRLLKARGRSQEQTVGEYLGHHREHIAVVQPVPGALHAVSGYAALPPQGH 258 Query: 245 GNANQFYVFINGRTVQDKFILSTIRTAYAETI-------------------PLGRYPVVV 285 NA++ + +NGR++ I + + + R+ V Sbjct: 259 SNASRQLLLLNGRSINAPAISRLVTALFQQLYRPNMRLENVQGEELQQLHQAANRHAAFV 318 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQS 321 L + + ++ F + + + S Sbjct: 319 LQISCKADEYELAHEADGHVAHFLSWEPLLKALKPS 354 Score = 98.6 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 60/182 (32%), Gaps = 42/182 (23%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 G A Q+ +I L +VDQHAA ER+ E +R Sbjct: 364 GRALQQVQCKFIPVMCGSLLALVDQHAADERVQLELLRDHLLGPGGQP------------ 411 Query: 467 EGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD------IIDEI 520 H + L P L ++ L + + + Sbjct: 412 ------WQVHSKILRA------------------PLPLGLTDVEGQLLEAYQHKLYLHHL 447 Query: 521 IDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 D+ + L + +L + AC G+I G ++ E LL +++ C HGRPT Sbjct: 448 QDTCGSGGLPAAVIRVLNSKACRGAIMFGDRLSQAECQELLNSLKQTRLCFSCAHGRPTM 507 Query: 581 IK 582 + Sbjct: 508 VP 509 >gi|195583624|ref|XP_002081617.1| GD25620 [Drosophila simulans] gi|194193626|gb|EDX07202.1| GD25620 [Drosophila simulans] Length = 138 Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 6/115 (5%) Query: 475 EHDEDLHRLGIKAERFGP----NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTY-TL 529 H + + G K E + + P + + + ++I + D+ Sbjct: 5 NHIDVFEKNGFKFEVDHEAPATKKVRLLGKPHSKRWEFGKEDIDELIFMLQDAPEGTICR 64 Query: 530 QDRIENILATMACYGSIRSGRKMQSIE-MNRLLREMEKNPNSSQCNHGRPTFIKL 583 R+ + A+ AC S+ G + M RL+ +M + C HGRPT L Sbjct: 65 PSRVRAMFASRACRKSVMIGTALSRNTTMRRLITQMGEIEQPWNCPHGRPTMRHL 119 >gi|326515170|dbj|BAK03498.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 146 Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 3/75 (4%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 IR+L E ++N+IAAGE+I+RPS +K+L+EN++DA+S + + GG Q++D G G Sbjct: 20 IRRLEESVVNRIAAGEVIQRPSSVMKDLVENNIDADSFTISITVKDGGLKLIQVSDGGHG 79 Query: 63 MTSEEIPMAVQRHCT 77 + + + + T Sbjct: 80 IW---MELILAEFAT 91 >gi|289616228|emb|CBI57024.1| putative MLH3 protein [Sordaria macrospora] Length = 966 Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 80/205 (39%), Gaps = 47/205 (22%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITS------------QTLLTPEIIDLLEGECALI 473 LV+VDQHAA ER+ E + + + + +S Q+L P DL + + L+ Sbjct: 713 LVLVDQHAADERVRVEDLMKSYFTIAPSSGGTKSNEIIAQTQSLQRPLRFDLSKQDGTLL 772 Query: 474 MEHDEDLHRLGIKAERFGPN------AIAIREIPAILSKKN--IPQLLRDII-------- 517 + + GI E F + ++ +P + ++ P++L +++ Sbjct: 773 LRYKLHFEYWGIFYEVFAGEDHSTRFTVEVQSLPPSILERCRLEPRVLIELLRKEVWRLN 832 Query: 518 DEI-------------IDSSTTYTL------QDRIENILATMACYGSIRSGRKMQSIEMN 558 D + + + + I +L + +C +I ++ E Sbjct: 833 DNLGLGLSTSHGIRGAQEEGERDWVARFHDCPEGILELLNSRSCRSAIMFNDELSLEECK 892 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKL 583 L+ ++ + QC HGRP+ + L Sbjct: 893 SLVLQLAECAFPFQCAHGRPSMVPL 917 Score = 97.4 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ QI + +I + + L+ NSLDA ++++ I + + DNG Sbjct: 1 MSIQPLPGDVVAQIKSSAVITSLNGVVDGLLRNSLDAGATKINISI-DYSRGNCSVEDNG 59 Query: 61 FGMTS----EEIPMAVQRHCTSKISDD 83 G+ E+ + + + TS+ D Sbjct: 60 LGIPPACFREDGGL-GKLYYTSRYPPD 85 >gi|212528600|ref|XP_002144457.1| DNA mismatch repair protein (Mlh3), putative [Penicillium marneffei ATCC 18224] gi|210073855|gb|EEA27942.1| DNA mismatch repair protein (Mlh3), putative [Penicillium marneffei ATCC 18224] Length = 922 Score = 107 bits (266), Expect = 7e-21, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 19/171 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 I L ++ ++ + I + I EL +N+LDA + V V+ GG + D+ Sbjct: 7 PILPLPPEVAKKVQSSVKITNLNGVIVELTKNALDAGAGTVSIVVDYRRGGS---IVEDD 63 Query: 60 GFGMTSEEIPM---AVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+G+ + E + H TSK ++ + +G+ L ++ +S LT+ SR + Sbjct: 64 GYGLPAAEFRDGSGLCRPHHTSKAGR--QSVSSC--KGQFLAALATISLLTISSRHCGHP 119 Query: 117 TGAQIAISGEKI-------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 + K+ + + + GT V V +LF +P R+ S Sbjct: 120 ETNSVIFHESKVISRVVPAPTHQEIRGGHGTRVTVNNLFGNMPVRVKHRAS 170 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 69/204 (33%), Gaps = 46/204 (22%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITS-------QTLLTPEIIDLLEGECALIMEHDE 478 LV++DQHAA ER E + D + S T + E E A + ++ Sbjct: 677 LVLIDQHAADERCRLEHLLFDMFTLDGESGVLSIRTHPFPTLIQCPIQEDEVASLTKYTR 736 Query: 479 DLHRLGIKAERFGP-------NAIAIREIPAILSKKN--IPQLLRDIIDEIIDSSTTYTL 529 G + ++I I +P +++++ P+L +I + I S + Sbjct: 737 YFESWGCHYKVQQELVDGKRQHSIIIEALPLVIAERCRLEPKLFIQLIRKEIWSRAGERI 796 Query: 530 QDRIE------------------------------NILATMACYGSIRSGRKMQSIEMNR 559 + ++ + AC SI + E Sbjct: 797 PPLRQNTSMATSISKPENRSFPWLRWIAGCPEGILELINSRACRSSIMFNDPLPIEECQN 856 Query: 560 LLREMEKNPNSSQCNHGRPTFIKL 583 L+ + K QC HGRPT I + Sbjct: 857 LISRLSKCAFPFQCAHGRPTMIPI 880 >gi|116196096|ref|XP_001223860.1| hypothetical protein CHGG_04646 [Chaetomium globosum CBS 148.51] gi|88180559|gb|EAQ88027.1| hypothetical protein CHGG_04646 [Chaetomium globosum CBS 148.51] Length = 91 Score = 106 bits (265), Expect = 9e-21, Method: Composition-based stats. Identities = 31/63 (49%), Positives = 44/63 (69%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I+ L + ++N+IAAGEII P A+KELIEN++DA S+ +E + GG QITDNG Sbjct: 28 RIKALDQDVVNKIAAGEIIVAPVHALKELIENAVDAGSTSLEVLAKDGGLKLLQITDNGS 87 Query: 62 GMT 64 G+ Sbjct: 88 GID 90 >gi|111380659|gb|ABH09706.1| MLH3-like protein [Penicillium marneffei] Length = 900 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 69/204 (33%), Gaps = 46/204 (22%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITS-------QTLLTPEIIDLLEGECALIMEHDE 478 LV++DQHAA ER E + D + S T + E E A + ++ Sbjct: 655 LVLIDQHAADERCRLEHLLFDMFTLDGESGVLSIRTHPFPTLIQCPIQEDEVASLTKYTR 714 Query: 479 DLHRLGIKAERFGP-------NAIAIREIPAILSKKN--IPQLLRDIIDEIIDSSTTYTL 529 G + ++I I +P +++++ P+L +I + I S + Sbjct: 715 YFESWGCHYKVQQELVDGKRQHSIIIEALPLVIAERCRLEPKLFIQLIRKEIWSRAGERI 774 Query: 530 QDRIE------------------------------NILATMACYGSIRSGRKMQSIEMNR 559 + ++ + AC SI + E Sbjct: 775 PPLRQNTSMATSISKPENRSFPWLRWIAGCPEGILELINSRACRSSIMFNDPLPIEECQN 834 Query: 560 LLREMEKNPNSSQCNHGRPTFIKL 583 L+ + K QC HGRPT I + Sbjct: 835 LISRLSKCAFPFQCAHGRPTMIPI 858 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 60/171 (35%), Gaps = 41/171 (23%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 I L ++ ++ + I + I EL +N+LDA + V V+ GG + D+ Sbjct: 7 PILPLPPEVAKKVQSSVKITNLNGVIVELTKNALDAGAGTVSIVVDYRRGGS---IVEDD 63 Query: 60 GFGMTSEEIPM---AVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G+G+ + E + H TSK R SR + Sbjct: 64 GYGLPAAEFRDGSGLCRPHHTSKAG-----------R---------------HSRHCGHP 97 Query: 117 TGAQIAISGEKI-------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 + K+ + + + GT V V +LF +P R+ S Sbjct: 98 ETNSVIFHESKVISRVVPAPTHQEIRGGHGTRVTVNNLFGNMPVRVKHRAS 148 >gi|317038460|ref|XP_001401452.2| DNA mismatch repair protein (Mlh3) [Aspergillus niger CBS 513.88] Length = 943 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 99/306 (32%), Gaps = 51/306 (16%) Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 + + I+ ++ IS+ +T P ++ + F Sbjct: 610 WVEKLLDNWINPVFGRPERPISAMDVSAGHETARPGSSSRNNQGELCGFESMGVSKFRGK 669 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 L D +E V++ + + L+++DQHAA ER E Sbjct: 670 LRKQDLRAAEIIAQVDQKFILVKMQLPSN-------SPGEPASNLILIDQHAADERCRVE 722 Query: 442 KMRQDFNSTKITSQ-----TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE-RFGPNA- 494 + + +++ S L P I ++ E +L + H G+ GP Sbjct: 723 ALMAELFTSEEDSPGSIQTITLDPIIFEIPATEASLFERYRNFFHSWGVAYTMEQGPKDK 782 Query: 495 ---IAIREIPAILSKKN--IPQLLRDIIDEIIDSSTTYTLQDR----------------- 532 I + +P +++++ P L+ D+I I + R Sbjct: 783 NVFIFVHTLPTLIAERCRTEPNLVSDLIRGEIWKREEENGRSRQPHHPTGFGASRPDMAQ 842 Query: 533 ---------------IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 I ++L + AC ++ + E L+R + QC HGR Sbjct: 843 TSSSWVDRLDGCPRGIIDLLNSRACRTAVMFNDVLDKNECQSLVRRLADCVFPFQCAHGR 902 Query: 578 PTFIKL 583 P+ I + Sbjct: 903 PSMIPI 908 Score = 101 bits (251), Expect = 5e-19, Method: Composition-based stats. Identities = 63/419 (15%), Positives = 127/419 (30%), Gaps = 72/419 (17%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 KIR L ++ ++ + I + I EL++N+LDA + V + GG + D+ Sbjct: 7 KIRPLPPDVVAKLKSSTAITHLNGVIVELVKNALDANARTVCVTVDFVRGGC---IVEDD 63 Query: 60 GFGMTSEEI---PMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ E + H TSK + I G +G L S+ A+S LT+ S +++ Sbjct: 64 GDGIPPAEFGPDGGLGKAHHTSKYHSN-HTIE--GRKGLFLASLAALSLLTITSHHVRHS 120 Query: 117 TGAQIAISG--------EKISSVRPVAMNPGTIVEVRDLFFTIPAR---LNFLKSEQVET 165 + + GT V V DLF +P R E Sbjct: 121 STNTVTFHHLTPVARLMPAPVYQELRFSAHGTSVTVNDLFGNMPVRVKSRALALQRPDEL 180 Query: 166 NLITDVIRRMAIA----------------YPKVSFTFSTIK------------SNRYKMN 197 D +R ++ + T R + Sbjct: 181 ERQWDELRHFLVSFMVANDRVAKLVILDAHRDKKITVCPQGLARQYGGEPDLQRLRSILA 240 Query: 198 FQSTNGNFPERISQVIGEDFINNAVE-----LNEKSNEITLQGYTGIPTFNRGNANQFYV 252 G I + + + + ++ P F R NAN Y Sbjct: 241 QSGLVGAQNTGIWDTVSASVSDFTIHAAVSLTPSPTKKVQFVSLGSTPVFARSNANLIYA 300 Query: 253 FINGRTVQ---------DKFILSTIRTAYAETIP-------LGRYPVVVLLLEIDPRQVD 296 +N + + +R A + + + ++P+ + ++ Sbjct: 301 EVNRSFALSDFGSMKNCSSAVEAPVRAADGQLMHSKPASKAVNKWPMFYIRIDSCNEWSI 360 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 + ++ I + + I + + + + + K+ + + + Sbjct: 361 DDDTQELPE-SDKSLQRIIDVLSTMINEFLRQSSLRPRTGKRKRSTPNVPPATTRHSSV 418 >gi|195172650|ref|XP_002027109.1| GL20045 [Drosophila persimilis] gi|194112922|gb|EDW34965.1| GL20045 [Drosophila persimilis] Length = 290 Score = 105 bits (261), Expect = 3e-20, Method: Composition-based stats. Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 9/172 (5%) Query: 407 GIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 Q + +II + D L IVDQHA+ E+ FE +++ ST++ Q L P+ +DL Sbjct: 1 MDIIGQFNLGFIIVKLQDDLFIVDQHASDEKYNFETLQR---STQLEYQRLTVPQSLDLT 57 Query: 467 EGECALIMEHDEDLHRLGIKAERFGP----NAIAIREIPAILSKKNIPQLLRDIIDEIID 522 ++++H + G K E + + P + + + ++I + D Sbjct: 58 AVNEMVLIDHLPVFEKNGFKFEINHEAPATKKVRLLGKPYSRQWEFGKEDIDELIFMLQD 117 Query: 523 SSTTY-TLQDRIENILATMACYGSIRSGRKMQS-IEMNRLLREMEKNPNSSQ 572 + R+ ++ A+ AC S+ G + M RL+ +M + Sbjct: 118 APEGTICRPSRVRSMFASRACRKSVMIGTALNRTTTMRRLITQMGEIEQPWN 169 >gi|134058357|emb|CAK38544.1| unnamed protein product [Aspergillus niger] Length = 969 Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 99/306 (32%), Gaps = 51/306 (16%) Query: 322 IQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDL 381 + + I+ ++ IS+ +T P ++ + F Sbjct: 610 WVEKLLDNWINPVFGRPERPISAMDVSAGHETARPGSSSRNNQGELCGFESMGVSKFRGK 669 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 L D +E V++ + + L+++DQHAA ER E Sbjct: 670 LRKQDLRAAEIIAQVDQKFILVKMQLPSN-------SPGEPASNLILIDQHAADERCRVE 722 Query: 442 KMRQDFNSTKITSQ-----TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAE-RFGPNA- 494 + + +++ S L P I ++ E +L + H G+ GP Sbjct: 723 ALMAELFTSEEDSPGSIQTITLDPIIFEIPATEASLFERYRNFFHSWGVAYTMEQGPKDK 782 Query: 495 ---IAIREIPAILSKKN--IPQLLRDIIDEIIDSSTTYTLQDR----------------- 532 I + +P +++++ P L+ D+I I + R Sbjct: 783 NVFIFVHTLPTLIAERCRTEPNLVSDLIRGEIWKREEENGRSRQPHHPTGFGASRPDMAQ 842 Query: 533 ---------------IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 I ++L + AC ++ + E L+R + QC HGR Sbjct: 843 TSSSWVDRLDGCPRGIIDLLNSRACRTAVMFNDVLDKNECQSLVRRLADCVFPFQCAHGR 902 Query: 578 PTFIKL 583 P+ I + Sbjct: 903 PSMIPI 908 Score = 100 bits (250), Expect = 6e-19, Method: Composition-based stats. Identities = 63/419 (15%), Positives = 127/419 (30%), Gaps = 72/419 (17%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 KIR L ++ ++ + I + I EL++N+LDA + V + GG + D+ Sbjct: 7 KIRPLPPDVVAKLKSSTAITHLNGVIVELVKNALDANARTVCVTVDFVRGGC---IVEDD 63 Query: 60 GFGMTSEEI---PMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ E + H TSK + I G +G L S+ A+S LT+ S +++ Sbjct: 64 GDGIPPAEFGPDGGLGKAHHTSKYHSN-HTIE--GRKGLFLASLAALSLLTITSHHVRHS 120 Query: 117 TGAQIAISG--------EKISSVRPVAMNPGTIVEVRDLFFTIPAR---LNFLKSEQVET 165 + + GT V V DLF +P R E Sbjct: 121 STNTVTFHHLTPVARLMPAPVYQELRFSAHGTSVTVNDLFGNMPVRVKSRALALQRPDEL 180 Query: 166 NLITDVIRRMAIA----------------YPKVSFTFSTIK------------SNRYKMN 197 D +R ++ + T R + Sbjct: 181 ERQWDELRHFLVSFMVANDRVAKLVILDAHRDKKITVCPQGLARQYGGEPDLQRLRSILA 240 Query: 198 FQSTNGNFPERISQVIGEDFINNAVE-----LNEKSNEITLQGYTGIPTFNRGNANQFYV 252 G I + + + + ++ P F R NAN Y Sbjct: 241 QSGLVGAQNTGIWDTVSASVSDFTIHAAVSLTPSPTKKVQFVSLGSTPVFARSNANLIYA 300 Query: 253 FINGRTVQ---------DKFILSTIRTAYAETIP-------LGRYPVVVLLLEIDPRQVD 296 +N + + +R A + + + ++P+ + ++ Sbjct: 301 EVNRSFALSDFGSMKNCSSAVEAPVRAADGQLMHSKPASKAVNKWPMFYIRIDSCNEWSI 360 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHL 355 + ++ I + + I + + + + + K+ + + + Sbjct: 361 DDDTQELPE-SDKSLQRIIDVLSTMINEFLRQSSLRPRTGKRKRSTPNVPPATTRHSSV 418 >gi|224157795|ref|XP_002199479.1| PREDICTED: similar to mutL homolog 3 (E. coli), partial [Taeniopygia guttata] Length = 161 Score = 104 bits (260), Expect = 4e-20, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 58/136 (42%), Gaps = 21/136 (15%) Query: 475 EHDEDLHRLGIKAE--RFGPNAIAIREIPAILSKKNIPQL-----------LRDIIDEII 521 ++L LG++ + I +R++P ++ +L + ++I E + Sbjct: 1 CCYKNLEDLGLELSFPETNNSLILVRKVPMCFIEREANELRRKRQPITKSIVEELIQEQV 60 Query: 522 DS------STTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 + TL +LA+ AC+G+I+ + E RL+ + QC H Sbjct: 61 ELLQTTRGGARGTLPLTFLKVLASQACHGAIKFNEHLTLEESCRLIEALSSCKLPFQCAH 120 Query: 576 GRPTFIKLKLSDIEKL 591 GRP+ + L +DI+ L Sbjct: 121 GRPSMLPL--ADIDHL 134 >gi|156400210|ref|XP_001638893.1| predicted protein [Nematostella vectensis] gi|156226017|gb|EDO46830.1| predicted protein [Nematostella vectensis] Length = 252 Score = 104 bits (259), Expect = 5e-20, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 21/160 (13%) Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA---IAIREIPAILSKK 507 ++ S + P +D E LI +L R G++ + + E+PA+ ++ Sbjct: 69 RVKSVPVSPPIEVDFTPEELRLIKSFRRELERTGLRFVIGSEPSAFRVIAHELPAVFVER 128 Query: 508 NIPQL-----------LRDIIDEIIDS-----STTYTLQDRIENILATMACYGSIRSGRK 551 +L ++D+I E + T + I +L++ AC+G+I+ G Sbjct: 129 EASELRHRRRSVAASIVKDLIQEQLQHLTSACGVTPGIPKTILRVLSSQACHGAIKFGEP 188 Query: 552 MQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKL 591 + E +L++++ QC HGRP+ + L D+++L Sbjct: 189 LAVAECEQLIQDLASCNLPFQCAHGRPSTVPL--IDLKRL 226 >gi|154290225|ref|XP_001545711.1| hypothetical protein BC1G_15789 [Botryotinia fuckeliana B05.10] gi|150847845|gb|EDN23038.1| hypothetical protein BC1G_15789 [Botryotinia fuckeliana B05.10] Length = 780 Score = 103 bits (258), Expect = 7e-20, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 34/59 (57%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 I+ + + I+QI +G++I +KEL+ENSLDA ++ V+ G ++ DNG Sbjct: 3 TIKPIEGRTIHQIQSGQVIVDLCSVVKELVENSLDAGATSVDVRFKNQGLEAIEVQDNG 61 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 5/144 (3%) Query: 231 ITLQGYTGIPTFN--RGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLG--RYPVVVL 286 I + G+ P R ++ F+N R + Y G + P + Sbjct: 84 IRIIGHISRPATGEGRQTPDRQMFFVNSRPCGLPQVAKAFNEVYKSYNGWGSTQSPFIFA 143 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN-KKGISTSSVLSKKMISSF 345 +E+D DVNV P K I + + + + ++ + S L + + Sbjct: 144 NIELDTHLYDVNVSPDKRTILLHDQSRMLENLKTALAGLFEGQDHTIPVSQLLAQKQPQY 203 Query: 346 HQDNAPKTHLPKYATSLTNTQEKL 369 Q + + +Q Sbjct: 204 KQLTINREATGTSKSLQKRSQASP 227 Score = 44.7 bits (104), Expect = 0.050, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 84/201 (41%), Gaps = 23/201 (11%) Query: 306 IRFRNPTIIRNFIIQSIQKA--INKKGISTSSVLSK----KMISSFHQDNAPKTHLPKYA 359 + R ++ I + + A +++ IS + +L K + S+F+ T + Sbjct: 576 KKIREEAKVQEMISEVERTAALPSRENISRAKLLVKGGAKRKESTFNLTQTVDTTILDIN 635 Query: 360 TSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYII 419 + Q L L N+ ++N + D +E+ + S++ + Q + +I+ Sbjct: 636 QQFESLQNALSLYANQTTSNSQDEALDSDGAEERLSLTISKS-DFAKMKIIGQFNLGFIL 694 Query: 420 -------------SQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLL 466 QT D + I+DQH++ E+ FE+++ + SQ L+ P+ + L Sbjct: 695 ASKAPELTTENSGIQTADNVFIIDQHSSDEKYNFERLQATTI---VQSQRLVYPKTLSLT 751 Query: 467 EGECALIMEHDEDLHRLGIKA 487 E ++ E+ + L + G Sbjct: 752 ALEEEIVAENLDILEQNGFVL 772 >gi|322789362|gb|EFZ14674.1| hypothetical protein SINV_12209 [Solenopsis invicta] Length = 818 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 51/270 (18%), Positives = 99/270 (36%), Gaps = 42/270 (15%) Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE-ESEATHYQLGIACAQIHQNYII 419 S + + + EN ++ + ES + + + Sbjct: 540 SFDSPNDTILFTENWQHEQAMVHPCKLKQKLCEFRLSRESLKYIKVINQVNDEFIAALMT 599 Query: 420 SQTTDGLVIVDQHAAHERLIFEKMRQDF---NSTKITSQTLLTPEIIDLLEGECALIMEH 476 L+++DQHA HER+ +E + + N +++ S L P ++ L++ + Sbjct: 600 YNKMKILLMIDQHAVHERIRYENLLLRYKVQNESELLSFNLRDPLSMEFPTEMYNLLLRN 659 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKN-----------IPQLLRDIIDEIIDSST 525 L + GI N + IR IP L + I LL D++ ++ Sbjct: 660 KTLLKKYGINLGSSKENTLLIRTIPQCLVTNSDSYNNEKILPKIYGLLNDVLKNRDITNQ 719 Query: 526 TYTLQDRIENILATMACYG--------------------------SIRSGRKMQSIEMNR 559 L I N +A+ AC+G +I+ G K+ + Sbjct: 720 ANALPLTIHNAIASEACHGIYLTIFPIFLFLLIFFINLFFSNFSGAIKFGDKLILEQCKS 779 Query: 560 LLREMEKNPNSSQCNHGRPTFIK-LKLSDI 588 L++ ++ ++C HGRPT I ++ S++ Sbjct: 780 LIKLLKLTKFPNRCAHGRPTIIPVMEFSEL 809 Score = 83.6 bits (205), Expect = 1e-13, Method: Composition-based stats. Identities = 67/350 (19%), Positives = 125/350 (35%), Gaps = 49/350 (14%) Query: 10 IINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 I+ IA+ E I ELI NSL++ ++ + I GK Q+ DNG G+ + + Sbjct: 14 TISNIASFE------QCISELIANSLNSRAAAIAVRI-HAGKRKIQVVDNGVGIPKDMLR 66 Query: 70 MAVQRHCTSKISDDFSNIHTF---GFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISG 125 + T DD + + L I +S LT+ SR + + Sbjct: 67 CIAEAEAT----DDQQQVCELPQSNY----LADIRRLSDCLTIASRYQYSKETFMKVLLE 118 Query: 126 EKISSVRPVAM-------NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + + GT V V + + ++ +T++I +I +A+ Sbjct: 119 TAFEMGFASNLIPIEQRPSCGTTVSVYGF--------HEIPCKKWDTSIICFLIAAIAVT 170 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE--LNEKSNEITLQGY 236 +VSF+ + + + + E + + G+D N V GY Sbjct: 171 KLEVSFSIRDEEQKKVVLRIAKPHSPV-EVLKTLFGKDLTLNHVWSIQCSPECNTNYHGY 229 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP--------LGRYPVVVLLL 288 G+ N ++F+N R + IL I+ A+ E + ++ L Sbjct: 230 VGLSDKNA----MQWIFLNHRPIYCPLILKFIQIAFKERFNLSSNALDLCEKNIFILFFL 285 Query: 289 EIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS 338 ++ + K I F + I N I I K++ K+ ++ Sbjct: 286 TFSEKEFTFVIENEKRCIMFYDMQKILNPIKNCIFKSLAKEATVSAITPY 335 >gi|254435728|ref|ZP_05049235.1| MutL C terminal dimerisation domain family [Nitrosococcus oceani AFC27] gi|207088839|gb|EDZ66111.1| MutL C terminal dimerisation domain family [Nitrosococcus oceani AFC27] Length = 322 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 75/347 (21%), Positives = 135/347 (38%), Gaps = 40/347 (11%) Query: 258 TVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 V+DK + R AY + GR+P +L LE+ QVDVN HPAK +RFR + F Sbjct: 1 MVRDKLLSHAARQAYGNRLSQGRHPAYLLYLELPTHQVDVNAHPAKHEVRFRESRQVHGF 60 Query: 318 IIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLS 377 I++++ + + + + + ++ + K + L Sbjct: 61 IVRTLAEILEQT----------------EPEGEHRLASGEFRSHPHEVLGKEQAGDTYLV 104 Query: 378 TNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHER 437 + + N + + G A + Y++++ + GL++VD A Sbjct: 105 AEVPGSYGPRKHGKHNPLSKGRNDAPSRFGQVQAFVLGRYLLTENSQGLMLVDLPIARAH 164 Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 L ++R + + I Q LL P + + H ++L +LG+ R GP + + Sbjct: 165 LAQARLRTAYAAGHIIRQPLLLPLTFQVSLQQAEWTERHVQELRKLGLGLHRLGPQTVVL 224 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI---ENILATMACYGSIRSGRKMQS 554 REIPA + + ++ LL + + + I E I+A A Y + + R Sbjct: 225 REIPAAIRELDLEGLLL--ALLAQLTRQQHIMPAEIPLGELIVALTAQYPASTTSRP-SL 281 Query: 555 IEMNRLLREMEKN---------PNSSQCNHGRPTFIKLKLSDIEKLF 592 EMN L+E+E P +L +I + F Sbjct: 282 QEMNAFLQELENLYQIETGLKAPLPW---------RELPEHEIAQWF 319 >gi|62089282|dbj|BAD93085.1| MutL protein homolog 1 variant [Homo sapiens] Length = 552 Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 76/197 (38%), Gaps = 4/197 (2%) Query: 132 RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKS 191 V G R F+ I R LK+ E I +V+ R ++ +SF+ Sbjct: 5 NHVLAIKGPRSRWRTFFYNIATRRKALKNPSEEYGKILEVVGRYSVHNAGISFSVKKQGE 64 Query: 192 NRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNE--ITLQGYTGIPTFNRGNANQ 249 + + I + G +E+ + + GY ++ Sbjct: 65 TVADVRTLPNASTV-DNIRSIFGNAVSRELIEIGCEDKTLAFKMNGYISNANYSVKKCIF 123 Query: 250 FYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFR 309 +FIN R V+ + I T YA +P +P + L LEI P+ VDVNVHP K + F Sbjct: 124 L-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNVDVNVHPTKHEVHFL 182 Query: 310 NPTIIRNFIIQSIQKAI 326 + I + Q I+ + Sbjct: 183 HEESILERVQQHIESKL 199 >gi|237668106|ref|ZP_04528090.1| DNA mismatch repair protein MutL [Clostridium butyricum E4 str. BoNT E BL5262] gi|237656454|gb|EEP54010.1| DNA mismatch repair protein MutL [Clostridium butyricum E4 str. BoNT E BL5262] Length = 76 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 35/64 (54%) Query: 531 DRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 + N +AT AC +I+ ++Q EM +L+ ++ + C HGRP IK +DI+K Sbjct: 11 EVKHNAIATKACKSAIKGNDELQINEMVKLIEDLRYIDDPFHCPHGRPIIIKFTSTDIDK 70 Query: 591 LFGR 594 F R Sbjct: 71 KFKR 74 >gi|241152208|ref|XP_002406860.1| DNA mismatch repair protein mlh3, putative [Ixodes scapularis] gi|215493957|gb|EEC03598.1| DNA mismatch repair protein mlh3, putative [Ixodes scapularis] Length = 232 Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 75/196 (38%), Gaps = 20/196 (10%) Query: 404 YQLGIACAQIHQNYIISQTTDGLVIVDQHA---AHERLIFEKMRQDFNSTKITSQTLLTP 460 G A + + + A + ++ + S + S +L P Sbjct: 1 MYAGNWMAWVDVTSGQTMYINVTSGNSAFAPLPCFKEDHQDQYKDKQGSC-LKSSSLKPP 59 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKN------------ 508 I L +++L +LG+ G + + +P+ L +++ Sbjct: 60 LSIALDPDVARRAAVCEKELRKLGVHFGAIGQQGLVLERLPSCLVERDDSERRCGRPSTI 119 Query: 509 ---IPQLLRDIIDEIIDSSTTY-TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 +LLR+ + ++ + + +L + ++L++ AC G+I+ G + E ++L + Sbjct: 120 ATQAQELLREHTEVLLSTRRSAISLPKVLLDVLSSQACRGAIKFGSVLDLSECRKILAAL 179 Query: 565 EKNPNSSQCNHGRPTF 580 + QC HGRP+ Sbjct: 180 SRCSLPFQCAHGRPSL 195 >gi|255949788|ref|XP_002565661.1| Pc22g17480 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592678|emb|CAP99036.1| Pc22g17480 [Penicillium chrysogenum Wisconsin 54-1255] Length = 961 Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 20/165 (12%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSR--VETVIAGGGKSFFQITDNG 60 IR L +I ++ + I + I EL++NSLDA + V GG + D+G Sbjct: 8 IRALPSDVIAKVKSSTSIVHLTGVILELVKNSLDANAHTVFVTVDFKRGGC---IVEDDG 64 Query: 61 FGMTSEEIPM---AVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 G+ E + + H TSK + + +G RG L S+ ++S LT+ SR + Sbjct: 65 EGIPPVEFEVTGGLGKPHHTSKFN--LGGL--YGHRGLFLASLASLSLLTVTSRHIDHGC 120 Query: 118 GAQIAISGEK--------ISSVRPVAMNPGTIVEVRDLFFTIPAR 154 I + +++ GT V V DLF +P R Sbjct: 121 TNSIILHHSTPVARLTPAPPHHALRSVDHGTSVTVNDLFGNMPVR 165 Score = 99.7 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 60/411 (14%), Positives = 128/411 (31%), Gaps = 68/411 (16%) Query: 238 GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPR-QVD 296 + + T+ K IR+ +P G P ++ IDP + Sbjct: 510 SSLLIHPKHKPNRRDDGQECTILPKPPYERIRSGDKGDLP-GDSPSDKMITWIDPHTNLA 568 Query: 297 VNVHP-----AKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAP 351 ++P S + + + +K + I ++L SF + P Sbjct: 569 YMINPRTGQTMNSRKSLATQRSPTDCVERPSKKPVQTFWI--DNMLGAWDNPSFSRTEIP 626 Query: 352 KTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACA 411 +L A +T + + D +E ++ Sbjct: 627 IPNLGAEAAGQQSTATSSHDCFKGIGSLDTAQVAKYRGKLQRHALETADVIAQVDRKFIL 686 Query: 412 QIHQNYIISQTTDG-----LVIVDQHAAHERLIFEKMR----------QDFNSTKITSQT 456 + I++ +G L+++DQHAA ER E++ +++ S Sbjct: 687 AKVRTAPITRNLEGPSNDVLLLIDQHAADERCRIEQLFGEMFVSAGLGENWESGARVRTV 746 Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNA----IAIREIPAILSKKN--IP 510 + ++ E L ++ GI+ G I I +P +++++ P Sbjct: 747 QVVSLAFEVSLTEGDLFQKYTSFFSTWGIEYATQGKTNSTALITIHTLPVLIAERCRLEP 806 Query: 511 QLLRDII---------------------DEIIDSSTTYTL-----------------QDR 532 +L D++ ++ I+ S + + Sbjct: 807 HVLIDLMRREIWSSEEDGNKPFLSKRTFEQDIELSDSDDVVHQRSASRSWVQRMNGCPQG 866 Query: 533 IENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 I ++L + AC +I + E L+ + + QC H RP+ + + Sbjct: 867 IVDLLNSRACRTAIMFNDPLNIDECQALVSSLARCAFPFQCAHARPSMVPI 917 >gi|323445867|gb|EGB02269.1| hypothetical protein AURANDRAFT_35408 [Aureococcus anophagefferens] Length = 161 Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 7/144 (4%) Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFG----PNAIAIREIPA 502 + T++ +Q LL P +DL E ++E + R+G + +A+ +P+ Sbjct: 4 WRDTRVDTQPLLAPLSLDLGATEELALLERRCTVERVGFRLAVNDLAPPGRRVAVISVPS 63 Query: 503 ILSKKNIPQLLRDI---IDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNR 559 +R++ +D+ T ++ + A+ AC ++ G + +M + Sbjct: 64 ARGTTFGVSDIRELITLLDDDAAHDTPLPKLPKLHTLFASKACRAAVMIGTPLIKTKMTQ 123 Query: 560 LLREMEKNPNSSQCNHGRPTFIKL 583 LL + C HGRPT L Sbjct: 124 LLDHLATLLQPWNCPHGRPTTRHL 147 >gi|1304124|dbj|BAA07513.1| PMS7 [Homo sapiens] gi|1407580|dbj|BAA07474.1| hPMS7 [Homo sapiens] Length = 161 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 39/67 (58%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+K+++ENSLDA ++ ++ + G +++ NG G Sbjct: 4 IKPIDRKSVHQICSGPVVLSLSTAVKKMVENSLDAGATNIDLKLKDYGMDLIEVSGNGCG 63 Query: 63 MTSEEIP 69 + E Sbjct: 64 VEEENFE 70 >gi|121706550|ref|XP_001271537.1| DNA mismatch repair protein (Mlh3), putative [Aspergillus clavatus NRRL 1] gi|119399685|gb|EAW10111.1| DNA mismatch repair protein (Mlh3), putative [Aspergillus clavatus NRRL 1] Length = 913 Score = 102 bits (253), Expect = 3e-19, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 84/259 (32%), Gaps = 43/259 (16%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSR--VETVIAGGGKSFFQITDN 59 KIR L + +I + I + I EL++N+LDA + V I GG + D+ Sbjct: 7 KIRPLPPDAVAKIKSSTSITHLNGVIVELVKNALDANARTVFVTVDIQRGGC---MVEDD 63 Query: 60 GFGMTSEEIPM---AVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHL---------- 106 G G+ E + H TSK+ N A+ G Sbjct: 64 GDGIPPSEFGSQGGLGKAHHTSKLH--LQN---------AVH--GQSGSFLASLASLSLL 110 Query: 107 TLMSRPPQNNTGAQIAISGEKIS--------SVRPVAMNPGTIVEVRDLFFTIPARLNFL 158 T+ S + ++ I + GT V V DLF +P R + Sbjct: 111 TVTSHHFREDSTNSIIFHHSTPIARLTPAPATHHLRFSGHGTCVTVNDLFGNMPVR---V 167 Query: 159 KSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFI 218 KS + D + R ++ K+ +T I +G Sbjct: 168 KSRALALQK-LDELERQWDDLRQLLIALMLANDGLTKLVVLTTGEERRLMIRSQLGNQGA 226 Query: 219 NNAVELNEKSNEITLQGYT 237 V++ ++ +T G Sbjct: 227 TGEVDMLRITSILTQAGLL 245 Score = 100 bits (249), Expect = 7e-19, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 69/205 (33%), Gaps = 39/205 (19%) Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT-----PEIIDLLEGECAL 472 ++ L++VDQHAA ER E + + S + P ++ E +L Sbjct: 667 DAQRSRSSLILVDQHAADERCRVEHLFGGLFADNDNSLCPIHTIRIDPITFEIPLTEASL 726 Query: 473 IMEHDEDLHRLGIKAE----RFGPNAIAIREIPAILSKKN--IPQLLRDIIDEIIDSSTT 526 ++ L G+ G + + +P +++++ L+ D+I I Sbjct: 727 FGQYAGVLASWGVGYTVTQGPGGRATVHVGFLPTLIAERCRVENSLVIDLIRSEIWQRED 786 Query: 527 YTL----------------------------QDRIENILATMACYGSIRSGRKMQSIEMN 558 I ++L + AC +I + E Sbjct: 787 ERHGPLTVEMRSREEAARDIEPRWVDRLQACPRGIIDLLNSRACRTAIMFNDVLTVDECQ 846 Query: 559 RLLREMEKNPNSSQCNHGRPTFIKL 583 L+ + + QC HGRP+ + + Sbjct: 847 SLVSRLRQCVLPFQCAHGRPSMVPI 871 >gi|167519609|ref|XP_001744144.1| hypothetical protein [Monosiga brevicollis MX1] gi|163777230|gb|EDQ90847.1| predicted protein [Monosiga brevicollis MX1] Length = 765 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 6/117 (5%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETV--IAGGGKSFFQITDN 59 K+R L + ++ ++ ++ + EL+ N+LDA ++RV + + DN Sbjct: 6 KVRPLPADLAARLGDAYVLSDVTVLVAELLANALDAGATRVVVHTALDEA---LVVVRDN 62 Query: 60 GFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 G G+ +++ + Q +SK+ T GFRG+AL +I L++ SR PQ+ Sbjct: 63 GHGLRHDDLQLLGQAVASSKLPTTAQA-QTHGFRGQALRAIAQCCCLSIKSRDPQSG 118 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 62/198 (31%), Gaps = 29/198 (14%) Query: 359 ATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI 418 +S +NT + FL +L L V +G A+ + Sbjct: 437 PSSASNTPQPRFLNLPKLPRGALQNIRLNNEHLHQTRV---------VGQLDAKFLCCTV 487 Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT--SQTLLTPEIIDLLEGECALIMEH 476 L ++DQHAAHER++ E+ + T Q + P L Sbjct: 488 PIPDGRLLYVIDQHAAHERIMLEQFLANDTQTGDRGLQQPITIPLAEPLSVEMVPWPFHS 547 Query: 477 DEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENI 536 L+ G + + L + ++ + L + ++ Sbjct: 548 TAWLNMYGK----------------CMKQYQCCGNWLNEWTSTML-TGELGLLPS-LRDM 589 Query: 537 LATMACYGSIRSGRKMQS 554 + T AC +I+ G ++ Sbjct: 590 ICTRACRAAIKFGDQLTL 607 >gi|258566177|ref|XP_002583833.1| predicted protein [Uncinocarpus reesii 1704] gi|237907534|gb|EEP81935.1| predicted protein [Uncinocarpus reesii 1704] Length = 962 Score = 100 bits (249), Expect = 7e-19, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 71/189 (37%), Gaps = 38/189 (20%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDN 59 I+ L K+ QI + I + AI L++NSLDA++ + + GG + + D+ Sbjct: 7 SIQPLPSKVAAQIESSTSITSLNGAILGLVKNSLDADAQTITITVDFQKGGCT---VEDD 63 Query: 60 GFGMT------SEEIPMAVQR----------------HC-TSKISDDFSNIHTFGFRGEA 96 G G+ + ++ H TSK D +G +G Sbjct: 64 GTGIPAFEFGEKGNLGKLHRKQYQTNSSSQDVSINALHADTSKF--DCPQ-EVYGHKGIF 120 Query: 97 LPSIGAVSHLTLMSRPPQNNTGAQIAISG-------EKISSVRPVAMNPGTIVEVRDLFF 149 L S+ +++ +T+ SR ++ + + GT V V DLF Sbjct: 121 LSSLISLALVTITSRIGSYSSTNSVTYHHSTAISRLCPAPAQHEFTSEHGTKVTVTDLFG 180 Query: 150 TIPARLNFL 158 +P R+ Sbjct: 181 NLPVRVKHR 189 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 43/176 (24%) Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTK----ITSQTLLTPEIIDLLEGECALIMEHD 477 + LV+VDQHAA ER+ E++ D + + + +L TP + E L Sbjct: 760 PQEILVLVDQHAADERVHTERLFGDLCGSSPLCPVDTTSLPTPIRFRVSTEEARLFKSQY 819 Query: 478 EDLHRLGIKAERFGPN-----AIAIREIPAILSKKN--IPQLLRDII-DEIIDSSTTYTL 529 + G + + + +PA++S++ P+L D++ EI + Sbjct: 820 DYFASWGCCYSVSKADSSQHATVEVTALPALISERCRVEPKLAIDMLRSEIWGHKDGELI 879 Query: 530 -------------------------------QDRIENILATMACYGSIRSGRKMQS 554 I ++L + AC +I + Sbjct: 880 CRPKHLSSATLEKPENPGDDSPHWPQAISHCPRGIVDMLNSRACRSAIMFNDVLSK 935 >gi|289807731|ref|ZP_06538360.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 149 Score = 100 bits (248), Expect = 9e-19, Method: Composition-based stats. Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 1/149 (0%) Query: 140 TIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQ 199 T +EV DLF+ PAR F+++E+ E N I ++IRR+A+A V+ S + Sbjct: 1 TTLEVLDLFYNTPARRKFMRTEKTEFNHIDEIIRRIALARFDVTLNLSHNGKLVRQYRAV 60 Query: 200 STNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGN-ANQFYVFINGRT 258 + +G R+ + G F+ A+ + + ++TL+G+ P Y ++NGR Sbjct: 61 AKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWVADPNHTTTALTEIQYCYVNGRM 120 Query: 259 VQDKFILSTIRTAYAETIPLGRYPVVVLL 287 ++D+ I IR A + + + P VL Sbjct: 121 MRDRLINHAIRQACEDKLGADQQPAFVLY 149 >gi|4495202|emb|CAB39253.1| hexB [Streptococcus pneumoniae] gi|4495206|emb|CAB39255.1| hexB [Streptococcus pneumoniae] gi|4495210|emb|CAB39257.1| hexB [Streptococcus pneumoniae] gi|4495214|emb|CAB39259.1| hexB [Streptococcus pneumoniae] gi|4495218|emb|CAB39261.1| hexB [Streptococcus pneumoniae] gi|4495222|emb|CAB39263.1| hexB [Streptococcus pneumoniae] gi|4495226|emb|CAB39265.1| hexB [Streptococcus pneumoniae] gi|4495230|emb|CAB39267.1| hexB [Streptococcus pneumoniae] gi|4495234|emb|CAB39269.1| hexB [Streptococcus pneumoniae] gi|4495238|emb|CAB39271.1| hexB [Streptococcus pneumoniae] gi|4495242|emb|CAB39273.1| hexB [Streptococcus pneumoniae] gi|4495246|emb|CAB39275.1| hexB [Streptococcus pneumoniae] gi|6901008|emb|CAB71568.1| DNA mismatch repair protein [Streptococcus mitis] gi|6901012|emb|CAB71570.1| DNA mismatch repair protein [Streptococcus mitis] gi|6901014|emb|CAB71571.1| DNA mismatch repair protein [Streptococcus mitis] gi|6901026|emb|CAB71577.1| DNA mismatch repair protein [Streptococcus mitis] gi|6901256|emb|CAB71683.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901258|emb|CAB71684.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901260|emb|CAB71685.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901262|emb|CAB71686.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901264|emb|CAB71687.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901266|emb|CAB71688.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901268|emb|CAB71689.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901270|emb|CAB71690.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901272|emb|CAB71691.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901276|emb|CAB71693.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901278|emb|CAB71694.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901383|emb|CAB71753.1| DNA mismatch repair protein [Streptococcus sp.] gi|6901391|emb|CAB71757.1| DNA mismatch repair protein [Streptococcus sp.] gi|6901395|emb|CAB71759.1| DNA mismatch repair protein [Streptococcus sp.] Length = 117 Score = 99.7 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P I + + + E L +G+ +G N +RE P ++++ I + + Sbjct: 1 QLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILREHPIWMAEEEIESGIYE 60 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 + D ++ + +++ + M+C SI++ ++ +LL ++ + N C Sbjct: 61 MCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCDNPYNC 117 >gi|56675837|emb|CAB71692.3| DNA mismatch repair protein [Streptococcus pneumoniae] Length = 138 Score = 99.7 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P I + + + E L +G+ +G N +RE P ++++ I + + Sbjct: 1 QLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILREHPIWMAEEEIESGIYE 60 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 + D ++ + +++ + M+C SI++ ++ +LL ++ + N C Sbjct: 61 MCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCDNPYNC 117 >gi|6901002|emb|CAB71565.1| DNA mismatch repair protein [Streptococcus mitis] gi|6901379|emb|CAB71751.1| DNA mismatch repair protein [Streptococcus sp.] Length = 117 Score = 99.7 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P I + + + E L +G+ +G N +RE P +S++ I + + Sbjct: 1 QLLVPYIFEFPADDVLRLKERMPLLEEVGVFLAEYGENQFILREHPIWMSEEEIESGIYE 60 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 + D ++ + +++ + M+C SI++ ++ +LL ++ + N C Sbjct: 61 MCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCDNPYNC 117 >gi|6901393|emb|CAB71758.1| DNA mismatch repair protein [Streptococcus sp.] Length = 117 Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P I + + + E L +G+ +G N +RE P ++++ I + + Sbjct: 1 QLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILREHPIWMAEEEIESGIYE 60 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 + D ++ + +++ + M+C SI++ ++ +LL ++ + N C Sbjct: 61 MCDMLLLTKEV-SIKKYRAELAIMMSCKQSIKANHRIDDHSARQLLYQLSQCDNPYNC 117 >gi|6901004|emb|CAB71566.1| DNA mismatch repair protein [Streptococcus mitis] Length = 117 Score = 99.4 bits (246), Expect = 2e-18, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL I + + + E L +G+ +G N +RE P ++++ I + + Sbjct: 1 QLLVAYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILREHPIWMAEEEIESGIYE 60 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 + D ++ + +++ + M+C SI++ ++ +LL ++ + N C Sbjct: 61 MCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCDNPYNC 117 >gi|6901280|emb|CAB71695.1| DNA mismatch repair protein [Streptococcus pneumoniae] Length = 117 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P I + + + E L +G+ +G N +RE P ++++ I + + Sbjct: 1 QLLVPYIFEFPADDALRLRERMPLLEEVGVFLAEYGENQFILREHPIWMAEEEIESGIYE 60 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 + D ++ + +++ + M+C SI++ ++ +LL ++ + N C Sbjct: 61 MCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCDNPYNC 117 >gi|154316931|ref|XP_001557786.1| hypothetical protein BC1G_03883 [Botryotinia fuckeliana B05.10] gi|150845495|gb|EDN20688.1| hypothetical protein BC1G_03883 [Botryotinia fuckeliana B05.10] Length = 886 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 71/191 (37%), Gaps = 31/191 (16%) Query: 426 LVIVDQHAAHERLIFEKMRQDF----------NSTKITSQTLLTPEIIDLLEGECALIME 475 L I+DQHAA ER+ E + DF S + + L P D+ + L Sbjct: 571 LAIIDQHAADERVRIEALLSDFLTYPTVSVAPASVSVVTTPLEKPLSCDISTKDSQLFRN 630 Query: 476 HDEDLHRLGIKAERFG-PNAIAIREIPAILSKKNI--PQLLRDIID----EIIDSSTTYT 528 H + GI +I ++++P +++ + P LL I+ + T++ Sbjct: 631 HKKHFSYWGIIYSVSPTGTSITVQQLPPLITARLAANPSLLLHILRTELYSYHEHPTSHP 690 Query: 529 --------------LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 + I +L + AC +I ++ E L++ + C Sbjct: 691 AITPESTWIERIAHIPKGILELLNSRACRTAIMFNDELGVDECRELVKRLANCKFPFMCA 750 Query: 575 HGRPTFIKLKL 585 HGR + I L Sbjct: 751 HGRVSMIPLGE 761 >gi|4495113|emb|CAB39210.1| hexB [Streptococcus mitis] gi|6901018|emb|CAB71573.1| DNA mismatch repair protein [Streptococcus mitis] gi|6901282|emb|CAB71696.1| DNA mismatch repair protein [Streptococcus pneumoniae] gi|6901373|emb|CAB71748.1| DNA mismatch repair protein [Streptococcus sp.] gi|6901381|emb|CAB71752.1| DNA mismatch repair protein [Streptococcus sp.] gi|6901387|emb|CAB71755.1| DNA mismatch repair protein [Streptococcus sp.] gi|6901389|emb|CAB71756.1| DNA mismatch repair protein [Streptococcus sp.] Length = 117 Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P I + + + E L +G+ +G N +RE P ++++ I + + Sbjct: 1 QLLVPYIFEFPADDALRLKERMALLEEVGVFLAEYGENQFILREHPIWMAEEEIESGIYE 60 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 + D ++ + +++ + M+C SI++ ++ +LL ++ + N C Sbjct: 61 MCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCDNPYNC 117 >gi|6901140|emb|CAB71634.1| DNA mismatch repair protein [Streptococcus oralis] Length = 117 Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P I + + + E L +G+ +G N +RE P ++++ I + + Sbjct: 1 QLLVPYIFEFPADDALRLRERMPLLEEVGVFLAEYGENQFILREHPIWMAEEEIESGVYE 60 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 + D ++ + +++ + M+C SI++ ++ +LL ++ + N C Sbjct: 61 MCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCDNPYNC 117 >gi|6901006|emb|CAB71567.1| DNA mismatch repair protein [Streptococcus mitis] Length = 117 Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P I + + + + L +G+ +G N +RE P ++++ I + + Sbjct: 1 QLLVPYIFEFPADDALRLKKRMPLLEEVGVFLTEYGENQFILREHPIWMAEEEIESGIYE 60 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 + D ++ + +++ + M+C SI++ ++ +LL ++ + N C Sbjct: 61 MCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCDNPYNC 117 >gi|308810805|ref|XP_003082711.1| putative MLH1 protein (ISS) [Ostreococcus tauri] gi|116061180|emb|CAL56568.1| putative MLH1 protein (ISS) [Ostreococcus tauri] Length = 595 Score = 98.6 bits (244), Expect = 3e-18, Method: Composition-based stats. Identities = 76/469 (16%), Positives = 148/469 (31%), Gaps = 48/469 (10%) Query: 112 PPQNNTGAQIAISGEKISSV--RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLIT 169 + + + K+ +P A PGT + V +LFF + R LKS E I Sbjct: 2 ARGAAHATRCSYADGKMDRDGAKPCAGVPGTTISVENLFFNVVTRQKALKSASEEYAKIL 61 Query: 170 DVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN--------A 221 +V++R A V+FT +R ++ + ER+ + G + A Sbjct: 62 EVLQRYAALRTDVAFTCRKQGESRTTLHA-PVAESRVERLQAIYGPAVAKDLKTLEFDTA 120 Query: 222 VELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY 281 + ++ + G ++ +FIN R V+ + + YA +P Sbjct: 121 TSKKKFDFKLKIDGLISGGNYHSKRTTFI-LFINSRLVECAPLKRACESVYAAILPKAEK 179 Query: 282 PVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKM 341 P + + L++ VDVNVHP K ++F + I I ++K + + S + + Sbjct: 180 PFIFMHLQLPFEDVDVNVHPTKQEVQFLHQDAIVEVIQSKVEKILLATNSTRSFTVQTLL 239 Query: 342 ISSFHQDNAPKTHLP---------------KYATSLTNTQEKLFLQENRLSTNDLLPS-- 384 + + T T +EK + T+ L + Sbjct: 240 PGAERLGGGANAETSGDKENSVRDDGFGVTQAKTPKTTQREKAGGDHKLVRTDANLAAGS 299 Query: 385 -DDPTYSEDNDPVEESEATHYQLGIAC-----------AQIHQNYIISQTTDGLVIVDQH 432 D N +E E + + + + + + Sbjct: 300 LDAYLQRAMNSEGKEHEKIQEVRRAVRERRGQRVEADDTYVCELTSVRELNEQIANAAHR 359 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 E + + + K + + + + M + L FG Sbjct: 360 ELGEIIKNHTLVGAVDGRKGVWLMQHQTRLYMVDAVKLSEEMFYQITLRN----FANFGS 415 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMA 541 A+ E PA + + + L + T++ E I +A Sbjct: 416 QAL---ERPAPIPELALCALKDKFAEPNSWDDADGTMEQVAEKIADMLA 461 >gi|6901128|emb|CAB71628.1| DNA mismatch repair protein [Streptococcus oralis] gi|6901132|emb|CAB71630.1| DNA mismatch repair protein [Streptococcus oralis] Length = 117 Score = 98.2 bits (243), Expect = 4e-18, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P I + + + E L +G+ +G N +RE P ++++ I + + Sbjct: 1 QLLVPYIFEFPADDALRLRERMPLLEEVGVFLAEYGANQFILREHPIWMAEEEIESGIYE 60 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 + D ++ + +++ + M+C SI++ ++ +LL ++ + N C Sbjct: 61 MCDMLLLTKKV-SIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCDNPYNC 117 >gi|6901377|emb|CAB71750.1| DNA mismatch repair protein [Streptococcus sp.] Length = 117 Score = 97.8 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P I + + + E L +G+ +G N +RE P ++++ I + + Sbjct: 1 QLLVPYIFEFPADDALRLKERMPLLEEVGVFLAEYGENQFILREHPIWMAEEEIESGIYE 60 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 + D ++ + +++ + M+C SI++ ++ +LL ++ + N C Sbjct: 61 MCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANYRIDDHSARQLLYQLSQCDNPYNC 117 >gi|6901122|emb|CAB71625.1| DNA mismatch repair protein [Streptococcus oralis] gi|6901126|emb|CAB71627.1| DNA mismatch repair protein [Streptococcus oralis] gi|6901130|emb|CAB71629.1| DNA mismatch repair protein [Streptococcus oralis] gi|6901136|emb|CAB71632.1| DNA mismatch repair protein [Streptococcus oralis] gi|6901138|emb|CAB71633.1| DNA mismatch repair protein [Streptococcus oralis] Length = 117 Score = 97.8 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P I + + + E L G+ +G N +RE P ++++ I + + Sbjct: 1 QLLVPYIFEFPVDDALRLRERMPLLEEAGVFLAEYGENQFILREHPIWMAEEEIESGIYE 60 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 + D ++ + +++ + M+C SI++ ++ +LL ++ + N C Sbjct: 61 MCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCDNPYNC 117 >gi|6901124|emb|CAB71626.1| DNA mismatch repair protein [Streptococcus oralis] Length = 117 Score = 97.8 bits (242), Expect = 5e-18, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P I + + + E L +G+ +G N +RE P ++++ I + + Sbjct: 1 QLLVPYIFEFPADDALRLRERMTLLEEVGVFLAEYGENQFILREHPIWMAEEEIESGIYE 60 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 I D ++ + +++ + M+C SI++ ++ +LL ++ + N C Sbjct: 61 ICDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCDNPYNC 117 >gi|4495123|emb|CAB39215.1| hexB [Streptococcus oralis] gi|6901010|emb|CAB71569.1| DNA mismatch repair protein [Streptococcus mitis] gi|6901016|emb|CAB71572.1| DNA mismatch repair protein [Streptococcus mitis] gi|6901022|emb|CAB71575.1| DNA mismatch repair protein [Streptococcus mitis] gi|6901024|emb|CAB71576.1| DNA mismatch repair protein [Streptococcus mitis] gi|6901134|emb|CAB71631.1| DNA mismatch repair protein [Streptococcus oralis] gi|6901375|emb|CAB71749.1| DNA mismatch repair protein [Streptococcus sp.] gi|6901385|emb|CAB71754.1| DNA mismatch repair protein [Streptococcus sp.] Length = 117 Score = 97.8 bits (242), Expect = 5e-18, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P I + + + E L +G+ +G N +RE P ++++ I + + Sbjct: 1 QLLVPYIFEFPADDALRLKERMTHLEEVGVFLAEYGENQFILREHPIWMAEEEIESGIYE 60 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 + D ++ + +++ + M+C SI++ ++ +LL ++ + N C Sbjct: 61 MCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHRIDDHSARQLLYQLSQCDNPYNC 117 >gi|74706073|sp|O95746|PM2LG_HUMAN RecName: Full=Postmeiotic segregation increased 2-like protein 16 gi|4239956|dbj|BAA74756.1| PMS2L16 [Homo sapiens] Length = 92 Score = 97.4 bits (241), Expect = 6e-18, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 38/67 (56%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+K+++ NSLDA ++ ++ + G +++ NG G Sbjct: 14 IKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIEVSGNGCG 73 Query: 63 MTSEEIP 69 + E Sbjct: 74 VEEENFE 80 >gi|4239954|dbj|BAA74755.1| PMS2L15 [Homo sapiens] Length = 148 Score = 97.4 bits (241), Expect = 6e-18, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 38/67 (56%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ + K ++QI +G ++ S A+K+++ NSLDA ++ ++ + G +++ NG G Sbjct: 70 IKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIEVSGNGCG 129 Query: 63 MTSEEIP 69 + E Sbjct: 130 VEEENFE 136 >gi|294462532|gb|ADE76812.1| unknown [Picea sitchensis] Length = 150 Score = 97.4 bits (241), Expect = 6e-18, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 45/140 (32%), Gaps = 32/140 (22%) Query: 476 HDEDLHRLGIKA-ERFG---PNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT--- 528 H + + G E + +P + + +++++ + D+ T Sbjct: 2 HLDTFRKNGFDFVEDTNAPPGRRFLLSAVPYSQNITFGLEDVQELLSILADAPAPPTSEV 61 Query: 529 -------------------------LQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 R+ +LA+ AC S+ G + +M +L+ Sbjct: 62 SDSLDCSDVCSNSYKKAIPQSISALCPSRVRAMLASRACRSSVMIGDALCKKDMETILQH 121 Query: 564 MEKNPNSSQCNHGRPTFIKL 583 + + C HGRPT L Sbjct: 122 LSTLNSPWNCPHGRPTMRHL 141 >gi|291333859|gb|ADD93541.1| hypothetical protein [uncultured marine bacterium MedDCM-OCT-S04-C191] Length = 192 Score = 97.0 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 44/171 (25%), Positives = 89/171 (52%), Gaps = 3/171 (1%) Query: 158 LKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDF 217 +KS E +++R+A+A P + F + + ++ + RI ++ GE+ Sbjct: 1 MKSTATELQHTQQLLQRLALAAPSIQFRLTHNQQMLLNLSQAP---DLEGRIQKLFGEEV 57 Query: 218 INNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIP 277 + + + ++N+++ +G+ +P+ + + Y+F+NGR V+ + I Y + Sbjct: 58 RDGLMPVQHQANQLSFEGWISLPSKTKTSRRLQYLFVNGRHVKCPALNHGIYDGYKGLLA 117 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 G++P L +E+ P VDVNVHPAK+ IRFRN +I + + + I++ Sbjct: 118 KGKHPAYFLKVEVVPEDVDVNVHPAKTEIRFRNSQLIHTILADQLSRQIHE 168 >gi|145608202|ref|XP_360741.2| hypothetical protein MGG_03284 [Magnaporthe oryzae 70-15] gi|145015711|gb|EDK00201.1| hypothetical protein MGG_03284 [Magnaporthe oryzae 70-15] Length = 778 Score = 96.7 bits (239), Expect = 1e-17, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 73/219 (33%), Gaps = 65/219 (29%) Query: 430 DQHAAHERLIFEKMRQDF----NSTKITSQTLL-----TPEIIDLLEGECALIMEHDEDL 480 + HAA ER E + + +S T+ + + P +IDL EC L+ + Sbjct: 544 NSHAADERCRVEALMAGYFEINDSNGNTTPSPVAEMLSVPVVIDLTRQECDLLEHYISHF 603 Query: 481 HRLGIKAERF---------------GPNA-------IAIREIPAILSKKN--IPQLLRDI 516 R GI E G N + + +P + ++ P LL ++ Sbjct: 604 RRWGIWYEMISVTQPAMATTEGGRRGANQEQNRLKRVCVTRLPPSILERCRSEPSLLVEL 663 Query: 517 I-----------------------DEIIDSSTT---------YTLQDRIENILATMACYG 544 + + +SS + I ++ + AC Sbjct: 664 LRKEVWRLEEDETISRAALSIAGRASLRESSDEAEHSWVPWFHGCPPGILELIISRACRS 723 Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 +I G + + LL + K QC HGRP+ + L Sbjct: 724 AIMFGDSLSVEDCRALLDRLGKCAFPFQCAHGRPSMVPL 762 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 111/328 (33%), Gaps = 50/328 (15%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ Q+ + +I + L+ NSLDA +++V + + DNG Sbjct: 1 MSIKPLPPEVAAQVKSSSVITSLNGVALGLLRNSLDANATKVNISV-DYRLGNCIVEDNG 59 Query: 61 FGMTSEEIPM---AVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT 117 FG+ E + H TS N SH TL++ + + Sbjct: 60 FGVPETEFRDTGGLGKLHLTS--HHQRQN-----------------SHATLVTHNSELVS 100 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQ------VETNLITDV 171 A+ ++I GT V VRDLF ++P R+ E + + + Sbjct: 101 RHIPALPEQRILVF-----PHGTRVAVRDLFGSMPVRVKQRALEAARTGSGRDWGQLVRM 155 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERI------SQVIGEDFINNAVELN 225 + + + + ++ + + +S + + R + + + V L+ Sbjct: 156 VVSLLLGFTGIAAVTLRDMQSTRVLTLRSDSSSLISRTSRILSRAALWDNPDVAEWVPLS 215 Query: 226 EKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVV 285 S IT+ G + + ++ ++ + D + + + ++ + Sbjct: 216 ASSAGITIDGCVSLAPA--PSKKMQFITLDMEPISDDLKSNVLFDEINKVFANSQFGFIE 273 Query: 286 -LLLEIDPRQVDVNVHPAKSYIRFRNPT 312 L + V KS N Sbjct: 274 DLHFDTSISAV-------KSEGAISNER 294 >gi|170091604|ref|XP_001877024.1| predicted protein [Laccaria bicolor S238N-H82] gi|164648517|gb|EDR12760.1| predicted protein [Laccaria bicolor S238N-H82] Length = 783 Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 73/217 (33%), Gaps = 59/217 (27%) Query: 426 LVIVDQHAAHERLIFEKMRQD-------------FNSTKITSQTLLTPEIIDLLEGECAL 472 LV+VDQHAA ER+ E ++ IT + L P + + E L Sbjct: 535 LVLVDQHAADERIRVECFLKELCLGFLHYRDEGSSTEKGITQKELQPPLPVLVTRHEAIL 594 Query: 473 IME---HDEDLHRLGIKA------------ERFGPNA------IAIREIPA-----ILSK 506 + H G + + F + + + +P +L Sbjct: 595 LKASVGIQRAFHNWGFQFADLSKAANVNSDDVFADGSSSEYEQLLVCSVPEVVSEKLLQG 654 Query: 507 KNIPQLLRDII--------------------DEIIDSSTTYTLQDRIENILATMACYGSI 546 + + L++ + DE+ + +++ + AC G+I Sbjct: 655 EELRDLVKSCLAYFQHSSDSSQITHSTNLRADELAWLGALRLCPKALLDLVNSKACRGAI 714 Query: 547 RSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + + RL+ ++ + QC HGRP+ + L Sbjct: 715 MFNDHLTVEQCQRLVYKLSQTSFPFQCAHGRPSLVPL 751 Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 54/362 (14%), Positives = 114/362 (31%), Gaps = 67/362 (18%) Query: 138 PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF--------STI 189 GT++ +RD F+ +P R S L+ I AI +P V+F+ + + Sbjct: 21 QGTVICIRDAFYNLPVRRLSHPSHIRTWELVRQEIETYAIVFPHVAFSLEDSRNARETDV 80 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP--------- 240 + R + + ++ G + E++ + + + G+ + Sbjct: 81 NTFRDRNFRIPKTPSILSAFRRIYGRALTEHVEEIDATRDSMKVVGFISLNGSLSKARLG 140 Query: 241 -------TFNRGNANQFYVFI--NGRTVQDKFILSTIRTAY------------------- 272 + FI N R + F++S+IR Sbjct: 141 HPRNNGKKMTFCSNRLISFFISTNTRFLTAIFVVSSIRALALVHFPKMFILCSHPGVGTD 200 Query: 273 ---------AETI----PLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 + P + V VL + + P VD + P+K+ ++F+ + I Sbjct: 201 ATTIRALMKMGILAILAPTEKKAVYVLNVTLPPDHVDNIIEPSKTSVQFQ----VELCIS 256 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTN 379 Q + K++ + + +SS + K Q+ + +L N Sbjct: 257 QGLLKSLIMGDMLKNRASILSFVSSVIKSFLMKHGFVLQRDIEPGPQDSPSRKRRKLEKN 316 Query: 380 DLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLI 439 +D + E N E + H + + ++ D HE+ + Sbjct: 317 ----FEDSGFMEGNHVSESPSSLHDRHTAEGSNSVLYTSTEDNPSDILWTDP-ITHEKFL 371 Query: 440 FE 441 + Sbjct: 372 VD 373 >gi|156043733|ref|XP_001588423.1| hypothetical protein SS1G_10870 [Sclerotinia sclerotiorum 1980] gi|154695257|gb|EDN94995.1| hypothetical protein SS1G_10870 [Sclerotinia sclerotiorum 1980 UF-70] Length = 618 Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 31/191 (16%) Query: 426 LVIVDQHAAHERLIFEKMRQDF----------NSTKITSQTLLTPEIIDLLEGECALIME 475 LVIVDQHAA ER+ E + +F ST +++ L D+ + L Sbjct: 379 LVIVDQHAADERVRIEALLSEFLTPPTTSTIPASTSVSTSLLDKTVDFDISTKDSELFRT 438 Query: 476 HDEDLHRLGIKAERFGP-NAIAIREIPAILSKKNI--PQLLRDIID----EIIDSSTTYT 528 + GI I ++ +P +++ + + P LL I+ + T++ Sbjct: 439 YISHFSYWGIIYSVSPTATTITVQYLPPLITARLVANPNLLIHILRTELYSYHEHPTSHP 498 Query: 529 --------------LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCN 574 + I +L + AC +I ++ E L++ + C Sbjct: 499 TITPASTWIERISYIPKSILELLNSRACRSAIMFNDELGVDECKELVKRLANCKFPFMCA 558 Query: 575 HGRPTFIKLKL 585 HGR + + L Sbjct: 559 HGRVSMVPLGE 569 >gi|71018795|ref|XP_759628.1| hypothetical protein UM03481.1 [Ustilago maydis 521] gi|46099386|gb|EAK84619.1| hypothetical protein UM03481.1 [Ustilago maydis 521] Length = 828 Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 71/199 (35%), Gaps = 37/199 (18%) Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNST---KITSQTLLTPEIIDLLEGECALIMEHDE 478 L +DQHAA ER E++ + + + L + + E A + + + Sbjct: 617 YFPILFCIDQHAADERYRLERLLEQYVDDCAAGTAAYNLPLTLTLPISVPEYARLQANAD 676 Query: 479 DLHR---LGIKAE-------RFGPNAIAIREIPAILSKK------------NIPQLLRDI 516 + R LG + G + + IP IL +K + D Sbjct: 677 LIARMKSLGWLVKTVVLIHASLGHAQVDLIGIPNILKEKTLTDSGRVKDQTLLQSAFADC 736 Query: 517 IDEIIDSS------------TTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREM 564 +++I+ S+ + + + + +L + AC +I ++ R+++ + Sbjct: 737 MEKILASNIKAVEASEDWLARSRWIPNSLMEVLKSRACRSAIMFNDRLGREVCERMVKRL 796 Query: 565 EKNPNSSQCNHGRPTFIKL 583 C HGRP + L Sbjct: 797 AACKFPFGCAHGRPVLVPL 815 >gi|85110020|ref|XP_963198.1| hypothetical protein NCU05385 [Neurospora crassa OR74A] gi|16944472|emb|CAC18267.2| related to dna mismatch repair homologue (hpms2) [Neurospora crassa] gi|28924866|gb|EAA33962.1| predicted protein [Neurospora crassa OR74A] Length = 867 Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 4/81 (4%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L +I QI + +I + + L+ NSLDA ++++ I + + DNG Sbjct: 1 MSIQPLPGDVIAQIKSSTVITSLNGVVDGLLRNSLDASATKINISI-DYSRGNCSVEDNG 59 Query: 61 FGMTSE---EIPMAVQRHCTS 78 G+ E + H TS Sbjct: 60 LGIPPACFREEGGLGKLHYTS 80 >gi|325685741|gb|EGD27819.1| DNA mismatch repair protein MutL [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 263 Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 91/229 (39%), Gaps = 9/229 (3%) Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLV 427 K + Q + T + + + + + Y++++ L Sbjct: 38 KSWDQHVKEQTALPPFAGGEEAASPVTSKADQLLRQHLPALRLLGQMGGYLLAEHGGDLY 97 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 ++DQ AA RL ++++ + Q LL P + D + + + L +LG++ Sbjct: 98 LLDQVAARRRLEYDQILASLEKDENYQQGLLEPLVFDFSVYDYQKLKDQLPLLRQLGLEM 157 Query: 488 ERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS-- 545 E FG N + + P L K + +R+++D+++ S +++L +A + Sbjct: 158 EDFGQNTLLMHSYPTWL-KGEVTVQVRELLDQLLSSRENDG-----KSLLKLVAAKAAES 211 Query: 546 -IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFG 593 + + E LL ++ + + G+ ++L +D+ KLF Sbjct: 212 NVSRRVNLTGAEAADLLLRLQTASDPYRDASGQVAVVRLSQNDLSKLFK 260 >gi|6901020|emb|CAB71574.1| DNA mismatch repair protein [Streptococcus mitis] Length = 117 Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 51/118 (43%), Gaps = 1/118 (0%) Query: 456 TLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRD 515 LL P I + + + + L +G+ +G N +RE P ++++ I + + Sbjct: 1 QLLVPYIFEFPADDALRLRKRMALLEEVGVFLAEYGENQFILREHPIWMAEEEIESGIYE 60 Query: 516 IIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQC 573 + D ++ + +++ + M+C SI++ + +LL ++ + N C Sbjct: 61 MCDMLLLTKEV-SIKKYRAELAIMMSCKRSIKANHHIDDHSARQLLYQLSQCDNPYNC 117 >gi|47198637|emb|CAF89461.1| unnamed protein product [Tetraodon nigroviridis] Length = 88 Score = 95.9 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I+ L ++ ++ +G I ++ELI NS+DAE++ V + Q+ DNG G Sbjct: 1 IKCLPTEVQGKLRSGVAIPSLQQCVEELILNSIDAEATCVGVRMDLEAFK-VQVLDNGTG 59 Query: 63 MTSEEIPMAVQRHCTSKIS--DDFSNIH 88 M ++ + R+ TSK +D N+ Sbjct: 60 MDADNLERLGNRYHTSKCRRVEDLENLR 87 >gi|242065624|ref|XP_002454101.1| hypothetical protein SORBIDRAFT_04g024565 [Sorghum bicolor] gi|241933932|gb|EES07077.1| hypothetical protein SORBIDRAFT_04g024565 [Sorghum bicolor] Length = 102 Score = 95.1 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 9/89 (10%) Query: 504 LSKKNIPQLLRDIIDEIIDSS---------TTYTLQDRIENILATMACYGSIRSGRKMQS 554 +++ +L+ + D D S T R+ +LA+ AC S G + Sbjct: 5 FGVQDVKELISMLADSQGDCSIISSYKLDTTDSVCPSRVRAMLASRACRMSTMIGDPLTK 64 Query: 555 IEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 EM ++L+ + + C HGRPT L Sbjct: 65 AEMKKILKNLTGLRSPWNCPHGRPTMRHL 93 >gi|123474762|ref|XP_001320562.1| ATPase [Trichomonas vaginalis G3] gi|121903370|gb|EAY08339.1| ATPase, putative [Trichomonas vaginalis G3] Length = 462 Score = 95.1 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 79/211 (37%), Gaps = 13/211 (6%) Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S++ N E + + +I++ + L +DQHAAHER+ K+ Sbjct: 257 SNENQKVTKNFDTNEVGDVVIRNLEYVCVWDRKFILATFQNKLYSIDQHAAHERINLSKL 316 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + + + L ++ + + E L + G + N + +P + Sbjct: 317 MKRCFTERYP--KTLKRPMMIHESFGISFNEKSYECLRKWGWRF-----NCKEVTAVPCV 369 Query: 504 LSKK--NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 + + +++ I + + D I + L T AC +I+ G + I L+ Sbjct: 370 CGVEIDDADGMIKYAIQ--CSTGNEPEIPDCILDALRTRACKTAIKFGEFIDEIRAKSLI 427 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 E+ + + C HGR + D ++ F Sbjct: 428 YELSISDRPNHCAHGRTVVAPI--LDFDRPF 456 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 28/200 (14%), Positives = 70/200 (35%), Gaps = 26/200 (13%) Query: 24 SIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 S EL+ NS+DA + + + + +TD+G G+ + + + + + Sbjct: 8 SAIASELVMNSIDANAQNITVTLDLL-LNQILVTDDGEGI--QNLNAVFIKGG----NTN 60 Query: 84 FSNI----HTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPG 139 + + + L + ++ + ++S+ + I + G Sbjct: 61 LNGVYKRNKSH------LSRLISICDVDILSKTKDGKIQRKTFGDEHYIDNYYE----SG 110 Query: 140 TIVEVRDLFFTIPAR---LNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKM 196 T + + +F R K++ N I +++ +P +SF S + ++ Sbjct: 111 TTILLTKIFSNNLIRIKEFTDPKNKLSLINRFKRFICTISLRFPHISF--IIFSSCQNQI 168 Query: 197 NFQSTNGNFPERISQVIGED 216 + +R Q+ G Sbjct: 169 LNLPKVESLEKRFIQITGVK 188 >gi|311250896|ref|XP_003124344.1| PREDICTED: mismatch repair endonuclease PMS2-like [Sus scrofa] Length = 74 Score = 94.7 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 30/65 (46%) Query: 519 EIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRP 578 + DS R+ + A+ AC S+ G + + EM RL+ M + + C HGRP Sbjct: 1 MLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMRRLVSHMGEMDHPWNCPHGRP 60 Query: 579 TFIKL 583 T + Sbjct: 61 TMRHI 65 >gi|84784022|gb|ABC61976.1| MLH3-like protein [Trichomonas vaginalis] Length = 462 Score = 94.7 bits (234), Expect = 4e-17, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 79/211 (37%), Gaps = 13/211 (6%) Query: 384 SDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM 443 S++ N E + + +I++ + L +DQHAAHER+ K+ Sbjct: 257 SNENQKVTKNFDTNEVGDVVIRNLEYVCVWDRKFILATFQNKLYSIDQHAAHERINLSKL 316 Query: 444 RQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAI 503 + + + L ++ + + E L + G + N + +P + Sbjct: 317 MKRCFTERYP--KTLKRPMMIHESFGISFNEKSYECLRKWGWRF-----NCKEVTAVPCV 369 Query: 504 LSKK--NIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLL 561 + + +++ I + + D I + L T AC +I+ G + I L+ Sbjct: 370 CGVEIDDADGMIKYAIQ--CSTGNEPEIPDCILDALRTRACKTAIKFGEFIDEIRAKSLI 427 Query: 562 REMEKNPNSSQCNHGRPTFIKLKLSDIEKLF 592 E+ + + C HGR + D ++ F Sbjct: 428 YELSISDRPNHCAHGRTVVAPI--LDFDRPF 456 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 74/207 (35%), Gaps = 27/207 (13%) Query: 17 GEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 E+I+ S EL+ NS+DA + + + + +TD+G G+ + + + Sbjct: 2 SELIDH-SAIASELVMNSIDANAQNITVTLDLL-LNQILVTDDGEGI--QNLNAVFIKGG 57 Query: 77 TSKISDDFSNI----HTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVR 132 + + + + + L + ++ + ++S+ + I + Sbjct: 58 ----NTNLNGVYKRNKSH------LSRLISICDVDILSKTKDGKIQRKTFGDEHYIDNYY 107 Query: 133 PVAMNPGTIVEVRDLFFTIPAR---LNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 GT + + +F R K++ N I +++ +P +SF Sbjct: 108 E----SGTTILLTKIFSNNLIRIKEFTDPKNKLSLINRFKRFICTISLRFPHISF--IIF 161 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGED 216 S + ++ + +R Q+ G Sbjct: 162 SSCQNQILNLPKVESLEKRFIQITGVK 188 >gi|221507841|gb|EEE33428.1| DNA mismatch repair protein, putative [Toxoplasma gondii VEG] Length = 1131 Score = 92.8 bits (229), Expect = 2e-16, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%) Query: 528 TLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ ILA+ AC +I G + +M +L+ + C HGRPT L Sbjct: 832 CRPKKVWEILASRACRSAIMIGDSLTVNQMQTVLKNLATLHLPFNCPHGRPTVRHL 887 >gi|312087399|ref|XP_003145457.1| hypothetical protein LOAG_09882 [Loa loa] gi|307759381|gb|EFO18615.1| hypothetical protein LOAG_09882 [Loa loa] Length = 86 Score = 92.8 bits (229), Expect = 2e-16, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 37/71 (52%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 +I + ++ +I G++I + A KELI+NSLDA++ +E + G ++ D+G Sbjct: 12 RIHAIPAEVCRKICTGQVIITLAGACKELIDNSLDAQAKTIEIRVKKMGFERVEVIDDGT 71 Query: 62 GMTSEEIPMAV 72 G+ S Sbjct: 72 GIHSLNFDALC 82 >gi|260779984|gb|ACX50621.1| DNA mismatch repair protein [Bacillus amyloliquefaciens] Length = 71 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Query: 513 LRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQ 572 + +II +++D+ ++ E M+C GSI++ R +++ E+ LL ++ + + Sbjct: 1 IEEIIQQVLDAKQID-IKKLREEAAIMMSCKGSIKANRHLRNDEIKALLDDLRRTTDPFT 59 Query: 573 CNHGRPTFIK 582 C HGRP I Sbjct: 60 CPHGRPIIIH 69 >gi|313618987|gb|EFR90823.1| DNA mismatch repair protein MutL [Listeria innocua FSL S4-378] Length = 55 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 27/53 (50%) Query: 542 CYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 C SI++ + +M LL + + + C HGRP I+ ++EK+F R Sbjct: 1 CKKSIKANHYLTMQDMEALLDTLREASDPFTCPHGRPVIIQYSTYELEKMFKR 53 >gi|17861656|gb|AAL39305.1| GH18717p [Drosophila melanogaster] Length = 504 Score = 92.4 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 71/414 (17%), Positives = 140/414 (33%), Gaps = 63/414 (15%) Query: 151 IPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERIS 210 +P R L+S E +++V+ R A+ P+V FT + + + E I Sbjct: 1 MPQRRQALRSPAEEFQRLSEVLARYAVHNPRVGFTLRKQGDAQPALRT-PVASSRSENIR 59 Query: 211 QVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYV-FINGRTVQDKFILSTIR 269 + G +E + + + I N + FIN R V+ + +++ Sbjct: 60 IIYGAAISKELLEFSHRDEVYKFEAECLITQVNYSAKKCQMLLFINQRLVESTALRTSVD 119 Query: 270 TAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI--- 326 + YA +P G +P V + L + P+ +DVNVHP K + F I + I Q ++ + Sbjct: 120 SIYATYLPRGHHPFVYMSLTLPPQNLDVNVHPTKHEVHFLYQEEIVDSIKQQVEARLLGS 179 Query: 327 -------NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLT---------------- 363 + + + L + ++ Q PK + +T Sbjct: 180 NATRTFYKQLRLPGAPDLDETQLADKTQRIYPKEMVRTDSTEQKLDKFLAPLVKSDSGVS 239 Query: 364 --NTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGI-------ACAQIH 414 ++QE L E S + S D + E + Sbjct: 240 SSSSQEASRLPEESFRVTAAKKSREVRLSSVLDMRKRVERQCSVQLRSTLKNLVYVGCVD 299 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTK--ITSQTLLTPEIIDLLEGECAL 472 + + Q L + + + E L +++M +F + S L E++ L A Sbjct: 300 ERRALFQHETRLYMCNTRSFSEELFYQRMIYEFQNCSEITISPPLPLKELLILSLESEAA 359 Query: 473 IMEHDE-------------DLHR-------LGIKAERFGPNAIAIREIPAILSK 506 ++ L + G++ G + +P++L + Sbjct: 360 GWTPEDGDKAELADGAADILLKKAPIMREYFGLRISEDG----MLESLPSLLHQ 409 >gi|58699799|ref|ZP_00374430.1| DNA mismatch repair protein MutL-1 [Wolbachia endosymbiont of Drosophila ananassae] gi|58533685|gb|EAL58053.1| DNA mismatch repair protein MutL-1 [Wolbachia endosymbiont of Drosophila ananassae] Length = 209 Score = 90.9 bits (224), Expect = 6e-16, Method: Composition-based stats. Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 7/204 (3%) Query: 334 SSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDN 393 V +++ S F + P + Q K F + + E Sbjct: 12 PDVQNERRPSPFENQLIKEFASPNEKAKGLSEQSKSF---DYTGIQKFPAQAEAMVLEKK 68 Query: 394 DPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 + + LG A Q++ YII++ D L+IVDQHAAHERL++E ++ + I Sbjct: 69 VLEQVDLIESHPLGFARCQVYNTYIIAEVRDKLIIVDQHAAHERLVYECLK---QKSSIK 125 Query: 454 SQTLLTPEIIDL-LEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 Q LL PE +++ + +I + + L +G E N + ++EIPAIL ++ ++ Sbjct: 126 RQKLLLPETVEIKNQAGMEMIEIYKDKLFEMGFDIEIKSENKVIVKEIPAILGAIDVKEM 185 Query: 513 LRDIIDEIIDSSTTYTLQDRIENI 536 L +IID + + T ++D++ I Sbjct: 186 LINIIDRLTEIEDTLPVEDKVNKI 209 >gi|332862597|ref|XP_001175192.2| PREDICTED: postmeiotic segregation increased 4-like protein-like, partial [Pan troglodytes] Length = 179 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%) Query: 45 VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGA 102 + G +++ NG G+ E+ +H TSKI + D + + TFGFRGEAL S+ A Sbjct: 2 KLKDYGVDLIEVSGNGCGVEEEKFEGLTLKHHTSKIQEFADLTRVETFGFRGEALSSLCA 61 Query: 103 V-SHLT 107 + S L+ Sbjct: 62 LRSQLS 67 >gi|331241530|ref|XP_003333413.1| hypothetical protein PGTG_15197 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309312403|gb|EFP88994.1| hypothetical protein PGTG_15197 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 956 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 71/224 (31%), Gaps = 66/224 (29%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPE------------------------ 461 +V DQHA HER+ E+ D + + + L T Sbjct: 650 MVAFDQHAVHERIRVERFLHDLCTGQFNVKDLETKIDHHHQQEDQGDQAQGGLHSGSKFV 709 Query: 462 IIDLLEGECALIMEHDEDLHRLGIKAE----------------------RFGPNAIAIRE 499 I + E +++ + +R G E G I +R Sbjct: 710 PILVTRHEFDGLVKFKKLFNRWGFIYELTLTESDLTHGHNHNEEDDEDDDVGFKQIFMRA 769 Query: 500 IPAILSKKN---------IPQLLRDIIDEIID-----------SSTTYTLQDRIENILAT 539 +P I+ + + +L+ + D + +L + Sbjct: 770 VPEIIWHRFQCNDGRFEVLKNVLKGCLGFFEDRSSPSHPNSDWFGAVKDCPSVLVQLLNS 829 Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 AC GSI G K+ + E +LL E+ + C HGRPT L Sbjct: 830 KACRGSIMFGDKLTNQESRKLLTELGRTRLPFSCAHGRPTCYPL 873 Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 72/503 (14%), Positives = 153/503 (30%), Gaps = 78/503 (15%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L E I + +G + + A+K L+E S+ + ++ + + I + DNG G Sbjct: 31 IH-LDEHSIALLRSGVYLASFTHALKSLLEISIRSGANTISSSIDPA-TGTICVDDNGVG 88 Query: 63 MTSEEIPMAVQRHCTSKI---------SDDFSNIHTFGFRGEALP--------SIGAVSH 105 + + + R ++ + S I ++ L S+ +S Sbjct: 89 ID-TGLVNLLGRFDSNSLVSAPSPNQSSSSQKQIVSY------LSVSQHRILDSLAHLSL 141 Query: 106 LTLMSRPPQNNTGAQIAISGEKISSVRPV----AMNPGTIVEVRDLFFTIPARLNFLK-- 159 L + SR + Q + P + GT VRDLF +P R Sbjct: 142 LDICSRHKDGSYSHQTLFRDGNVIFSAPAKTSRRHSHGTTTTVRDLFHNLPVRQIRENDP 201 Query: 160 -SEQVETNLITD----VIRRMAIAYPKVSFTFSTIKSNRYK---------MNFQSTNGNF 205 Q + +++ +AI YP +SFT S G F Sbjct: 202 LRHQQRLRRQWEESRLILQSLAIVYPHISFTLRNSSHQNLTSSSSNSSASFYRISKTGLF 261 Query: 206 PERISQVIGEDFINNAVELNEKSNEITLQGYTGI------------------PTFNRGNA 247 ++ G+ F+ +++ L + + G P+ + + Sbjct: 262 SSTFGKIFGQQFVQDSIPLKVSIDGFQVTGLFSKKRHSSRAIQLIYLDRVLIPSNSLVHR 321 Query: 248 NQFYVFINGRTVQDKFILSTIRTAYAETIP-------LGRYPVVVLLLEIDPRQVDVNVH 300 + +F ++ + + + P + R+PV +L+ P+ Sbjct: 322 SLANLFTGLQSEDISGSSAPQTSLSPKVSPLKNGASSVDRHPVYLLIFTSLPK--SNTSD 379 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 + F + ++ I Q+ +K S V + K Sbjct: 380 DHNHAVHFLDEKE-QDLIPQTEEKINRIASQVFSQVFLPPKELPSSSNGQKKLQQESLVK 438 Query: 361 SLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIIS 420 ++ + + + + + P D H A + H++ + Sbjct: 439 RTLQSRWPVTKRPRLTDPSPPISMNGPQSISLTDRFSAPSKKHIDRSAAKSVHHKSCVPK 498 Query: 421 QTTDGLVIVDQHAAHERLIFEKM 443 +D H + + + + Sbjct: 499 SKPH----LDLHKTKPKHLTKSL 517 >gi|299748042|ref|XP_002911246.1| hypothetical protein CC1G_14675 [Coprinopsis cinerea okayama7#130] gi|298407792|gb|EFI27752.1| hypothetical protein CC1G_14675 [Coprinopsis cinerea okayama7#130] Length = 419 Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 88/309 (28%), Gaps = 74/309 (23%) Query: 343 SSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEAT 402 + + + A L+++ E F + + + S D + Sbjct: 99 PASTPEWLSRALKTNQAYQLSSSTEGPFAEPSFPVHRRRSDATQHVRSHDESAAMQISRD 158 Query: 403 HYQLGIACAQIHQNYIISQTTDG--------------------LVIVDQHAAHERLIFEK 442 + Q+ + +I +V+VDQHAA ER+ E+ Sbjct: 159 QLRQAQVINQVDRKFIACLVEVDFNGKKAGGMGASGSRASSTIMVLVDQHAADERIRVER 218 Query: 443 MRQDFN-------------STKITSQTLLTPEIIDLLEGECAL---IMEHDEDLHRLGIK 486 + S L P + L + E +L GI Sbjct: 219 FLRPLCIAFLRASAGRSEPSDGPVVTELPCPFPVLLTKHEASLLQRKETIQASFRNWGIS 278 Query: 487 AERFGPNAIA---------------IREIPAILSKK--NIPQLLRDIIDEIID------- 522 ++ + +P++LS K + + ++ + ++ + Sbjct: 279 FSEIPIESLTEASDSGTSKEYVQVFVTSLPSVLSDKGKELQECIKSFLGQLQEGEIRPYD 338 Query: 523 --------------SSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNP 568 S + + + AC G+I + + RL+ ++ + Sbjct: 339 AYFPGEATVGMEEWLSALRHCPRSLLELANSKACRGAIMFNDPLTREQCERLISQLAQAA 398 Query: 569 NSSQCNHGR 577 QC HGR Sbjct: 399 YPFQCAHGR 407 >gi|159484178|ref|XP_001700137.1| predicted protein [Chlamydomonas reinhardtii] gi|158272633|gb|EDO98431.1| predicted protein [Chlamydomonas reinhardtii] Length = 86 Score = 89.3 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R L + ++++I G + A+ EL+ NSLDAE+ V + SF + D+G G+ Sbjct: 6 RPLPKPLVDKIRTGVTLNTVPQAVVELLCNSLDAEARTVLIKLNAATLSF-TVEDDGCGI 64 Query: 64 TSEEIPMAVQRHCTSKISD 82 SE++ + R+ TSK+ Sbjct: 65 CSEDLELVGTRYYTSKLRS 83 >gi|118482038|gb|ABK92950.1| unknown [Populus trichocarpa] Length = 79 Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 25/54 (46%) Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 R+ + A+ AC S+ G + EM ++L + + C HGRPT L Sbjct: 9 PSRVHAMFASRACRSSVMIGDALGRNEMQKILEHLVDLKSPWNCPHGRPTMRHL 62 >gi|310128484|ref|XP_003120600.1| PREDICTED: mismatch repair endonuclease PMS2-like isoform 5, partial [Homo sapiens] Length = 496 Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 89/251 (35%), Gaps = 25/251 (9%) Query: 102 AVSHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLK 159 + S +T+ + G ++ KI P GT V V+ LF T+P R F + Sbjct: 13 SHSDVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQR 72 Query: 160 SEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDF 217 + + E + V+ I + + + + T G+ E I V G+ Sbjct: 73 NIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQ 132 Query: 218 INNAVELNEK------------------SNEITLQGYTGIPTFNRGNA--NQFYVFINGR 257 + + + + N + G+ T G + ++ + FIN R Sbjct: 133 LQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRR 192 Query: 258 TVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF 317 + + Y +YP VVL + +D VD+NV P K I + ++ Sbjct: 193 PCDPAKVCRLVNEVYHMY-NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAV 251 Query: 318 IIQSIQKAINK 328 + S+ + Sbjct: 252 LKTSLIGMFDS 262 >gi|302852295|ref|XP_002957668.1| hypothetical protein VOLCADRAFT_119750 [Volvox carteri f. nagariensis] gi|300256962|gb|EFJ41217.1| hypothetical protein VOLCADRAFT_119750 [Volvox carteri f. nagariensis] Length = 184 Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 2/95 (2%) Query: 491 GPNAIAIR-EIPAILSKKNI-PQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRS 548 G +++ + +P+I P LR + ++ ++ L + +L + AC +I Sbjct: 17 GNDSVQVLVSVPSICGTTLTNPTDLRLYLHQLDETGGAGLLPPAVLRVLRSKACRTAIMF 76 Query: 549 GRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 G + + L+ ++ +QC HGRPT + L Sbjct: 77 GDHLTPEQCTMLVAQLRDTRLWTQCAHGRPTVVPL 111 >gi|72384723|gb|AAZ67653.1| DNA mismatch repair protein putative [Haemophilus parasuis 29755] Length = 288 Score = 87.8 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 104/271 (38%), Gaps = 27/271 (9%) Query: 276 IPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSS 335 +P YPV VL L++DP VDVNVHPAK +RF ++ +FI Q + A+ + + Sbjct: 1 LPKDHYPVFVLFLDLDPSHVDVNVHPAKHEVRFHQSRLVHDFIYQGVLNALEDQHHLPLT 60 Query: 336 VLSKKMISSF-----------------HQDNAPKTHLPKYATSLTNTQEKLFLQENRLST 378 + + ++ +++ + S +NT+ + + Sbjct: 61 TNVSEALPNYIADTNRVASGQNIFAHSYREPRSTSSTHAERQSYSNTRSSGVSKNEQKWY 120 Query: 379 NDLLPSDDPTYSEDNDPVEE-------SEATHYQLGIACAQIHQNYIISQTTDGLVIVDQ 431 +LL + + ++PV++ + ++ Q + + Sbjct: 121 GELLSTSPMQDYKRSEPVQDLPKTAKITPLVEPIAEPVTPYAQALAVVKQKALLMKQGET 180 Query: 432 HAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER-- 489 +++ K +Q LL P + L E + A + L LG + Sbjct: 181 FYLLSLEKLAQLKLQAELAKRENQALLIPLSLTLDEQQTASWQQSQTALADLGFDIQTKQ 240 Query: 490 -FGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 G + I+++P L ++N+ QLL + ++ Sbjct: 241 WQGQTRLTIQKVPTCLREQNLQQLLFSLFNQ 271 >gi|256073609|ref|XP_002573122.1| hypothetical protein [Schistosoma mansoni] gi|238658294|emb|CAZ29354.1| conserved hypothetical protein [Schistosoma mansoni] Length = 263 Score = 86.6 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 80/208 (38%), Gaps = 34/208 (16%) Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEII----------- 463 + + + ++ VDQHAAHER++ E ++ + S E Sbjct: 55 KKHGYTSKHLYIIAVDQHAAHERILLECFEKECLNYFEMSPNKAIHEPQFWKMFSNKISL 114 Query: 464 -----DLLEGECALIMEHDED--LHRLGI--KAERFGPNAIA-IREIPAILSKKNIPQ-- 511 + + + E + L + G + I IP ++ + ++P+ Sbjct: 115 KLSKESVPDIFNLVNREPAKLCCLSKYGFSATLDCNSMGQFIFITMIPRVIPQNHLPEKL 174 Query: 512 ---LLRDIIDEIIDSSTTYTLQDRIENILA------TMACYGSIRSGRKMQSIEMNRLLR 562 + I I+ + + I A + AC+ +IR G K+ +M +L+ Sbjct: 175 FSKTIISCIRVILLNKGEPNVNTIHHIIQAIHPLLESRACHQAIRFGSKLNKKQMEKLIV 234 Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEK 590 ++ + QC HGRPT +K+ I+K Sbjct: 235 DLARCRIPFQCAHGRPTCTLIKM--IDK 260 >gi|114618511|ref|XP_001137891.1| PREDICTED: postmeiotic segregation increased 4-like protein-like [Pan troglodytes] Length = 118 Score = 86.6 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%) Query: 45 VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGA 102 + G +++ NG G+ E+ +H TSKI + D + TFGFRGEAL S+ A Sbjct: 57 KLKDYGVDLIEVSGNGCGVEEEKFEGLTLKHHTSKIQEFADVPQVETFGFRGEALSSLCA 116 Query: 103 V 103 + Sbjct: 117 L 117 >gi|169603728|ref|XP_001795285.1| hypothetical protein SNOG_04872 [Phaeosphaeria nodorum SN15] gi|160706445|gb|EAT87263.2| hypothetical protein SNOG_04872 [Phaeosphaeria nodorum SN15] Length = 930 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 67/213 (31%), Gaps = 55/213 (25%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTK----------------ITSQTLLTPEIIDLLEGE 469 LV++DQHAA ER+ E + ++ S + S L P + E Sbjct: 685 LVLIDQHAADERIRVEALLRELCSPMDTHCSGYQSKLGHRALVGSVMLENPPKFTVSRQE 744 Query: 470 CALIMEHDEDLHRLG--IKAERFGPNAI------------AIREIPAILSKKN--IPQLL 513 + + G N++ + +P +S++ QLL Sbjct: 745 QLHFATYADRFASWGILFDFVDSATNSVKVVTSEEPSRLLCVTALPPGISERCQADAQLL 804 Query: 514 RDIIDE-----------------------IIDSSTTYTLQDRIENILATMACYGSIRSGR 550 + + + + +I+ + AC +I Sbjct: 805 ISFLRTAVWKYANDLSLSTETSLPQPSQPLDWIGRLGHCPEGLVDIINSRACRSAIMFND 864 Query: 551 KMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 ++ + L++++ C HGRP+ + L Sbjct: 865 ELDMHQSRGLVQKLATCAFPFVCAHGRPSMVPL 897 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L + ++ QI + I + + EL++NSLDA +++VE + + + D+G G Sbjct: 14 ILPLPDDVVAQIKSSTAIVSLTDVVLELLKNSLDARATKVEASVDFA-RGACTVEDDGRG 72 Query: 63 MTSEEI 68 + E Sbjct: 73 IPPLEF 78 >gi|116196094|ref|XP_001223859.1| hypothetical protein CHGG_04645 [Chaetomium globosum CBS 148.51] gi|88180558|gb|EAQ88026.1| hypothetical protein CHGG_04645 [Chaetomium globosum CBS 148.51] Length = 540 Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 86/231 (37%), Gaps = 8/231 (3%) Query: 161 EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 + T + + R A+ V+F+ + + Q+T +RI Q+ G N Sbjct: 47 PRTSTTRSSTWLGRYAVHCSNVAFSCKKHGESSTSIAVQATASGL-DRIRQIYGGSVANE 105 Query: 221 AVELNEK--SNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPL 278 E + +G ++ +FIN R V+ I I Y+ +P Sbjct: 106 LTEFSTSDDRWAFKAEGLATNANYS-TKKTTILLFINHRCVESSNIRKAIEQTYSAFLPK 164 Query: 279 GRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS----TS 334 +P V L LEIDP++VDVNVHP K + F N I I + I+ + S T Sbjct: 165 NGHPFVYLSLEIDPQRVDVNVHPTKREVNFLNEDEIIQAICEHIRSKLAAVDASRTFLTQ 224 Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD 385 S+L S + + R + N+L+ +D Sbjct: 225 SLLPGGTWSGPIPSPHDSAVAAAAPSKTISGAAAARKTPARANENNLVRTD 275 >gi|291333860|gb|ADD93542.1| hypothetical protein [uncultured marine bacterium MedDCM-OCT-S04-C191] Length = 266 Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 95/256 (37%), Gaps = 8/256 (3%) Query: 341 MISSFHQDNAPKTHLPKYATSLTNT---QEKLFLQENRLSTNDLLPSDDPTYSEDNDPVE 397 ++ K PK S+ N KL E + + ++ + E Sbjct: 15 PVAPSGASFRKKIASPKILESIPNEVSIPSKLVKSEIKSTESNQDLDFPEELKLFPNLAE 74 Query: 398 ESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTL 457 + E +HQ+ I+ + DGL + D H H+ LI + + + Sbjct: 75 KPEQF-----KIIGMLHQSQILMEDEDGLAVGDVHTIHKLLIEVLLSKTVEENSVRLFEN 129 Query: 458 LTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDII 517 P +++L + ++ H + L + G + + FG +I +P L+ + +L+D + Sbjct: 130 EVPRLLELNAQDALILELHQKLLRQCGFQIDSFGGTTFSISSLPFPLAPEKCAGVLKDFV 189 Query: 518 DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGR 577 + + ++++ +A + ++ + MN L+ +ME+ + G Sbjct: 190 SRVSAFGKRAHESEIRKDLIQCIAQHAALDRQSSLNYRAMNLLIAQMEQLKLPPLNSSGE 249 Query: 578 PTFIKLKLSDIEKLFG 593 + + ++ K Sbjct: 250 RLWFLIPKDELIKRLK 265 >gi|242050108|ref|XP_002462798.1| hypothetical protein SORBIDRAFT_02g032165 [Sorghum bicolor] gi|241926175|gb|EER99319.1| hypothetical protein SORBIDRAFT_02g032165 [Sorghum bicolor] Length = 101 Score = 85.1 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I++L + + + + + I+ I+ELI NS+DA +S+++ + + ++ D+G Sbjct: 3 TIKRLPKSVHSSLRSSVILSDLPRVIEELIYNSIDANASKIDIAV-NIRACYVKVEDDGC 61 Query: 62 GMTSEEIPMAVQRH 75 G+T +E+ + +++ Sbjct: 62 GITRDELVLLGEKY 75 >gi|310128482|ref|XP_003120598.1| PREDICTED: mismatch repair endonuclease PMS2-like isoform 3, partial [Homo sapiens] Length = 616 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 87/248 (35%), Gaps = 25/248 (10%) Query: 105 HLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQ 162 +T+ + G ++ KI P GT V V+ LF T+P R F ++ + Sbjct: 13 DVTISTCHASAKVGTRLMFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIK 72 Query: 163 VETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINN 220 E + V+ I + + + + T G+ E I V G+ + + Sbjct: 73 KEYAKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQS 132 Query: 221 AVELNEK------------------SNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQ 260 + + N + G+ T G + ++ + FIN R Sbjct: 133 LIPFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCD 192 Query: 261 DKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQ 320 + + Y +YP VVL + +D VD+NV P K I + ++ + Sbjct: 193 PAKVCRLVNEVYHMY-NRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKT 251 Query: 321 SIQKAINK 328 S+ + Sbjct: 252 SLIGMFDS 259 >gi|149915516|ref|ZP_01904042.1| DNA mismatch repair protein [Roseobacter sp. AzwK-3b] gi|149810408|gb|EDM70251.1| DNA mismatch repair protein [Roseobacter sp. AzwK-3b] Length = 151 Score = 84.3 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 50/151 (33%), Positives = 87/151 (57%), Gaps = 7/151 (4%) Query: 158 LKSEQVETNLITDVIRRMAIAYPKVSFT---FSTIKSNRYKMNFQSTNGNFPERIS---- 210 ++S++ E I D++RR+A+A P V FT S R + G+ + + Sbjct: 1 MRSDRAEAQAIGDIVRRLAMADPFVGFTLRDVSGGGQGRMVFRAYAETGDMFDALHGRLG 60 Query: 211 QVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRT 270 +++G DF +NA+ ++ + + + GY +PT++RG+A Y+F+NGR V+D+ ++ +R Sbjct: 61 RILGSDFADNALRIDATHDGLRMTGYAALPTYSRGSAVAQYLFVNGRPVRDRMMIGALRA 120 Query: 271 AYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 AY + + R+P L +E DP VDVNVHP Sbjct: 121 AYMDVLSRDRHPAAALFVECDPMLVDVNVHP 151 >gi|325526068|gb|EGD03737.1| DNA mismatch repair protein [Burkholderia sp. TJI49] Length = 120 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 2/120 (1%) Query: 249 QFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRF 308 Q Y F+NGR V+DK + +R AY + + RYP VL L++ P VDVNVHP+K +RF Sbjct: 2 QQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVHPSKIEVRF 61 Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 R+ I ++ ++Q+A+ + ++ + + H + +P+ AT L +Q Sbjct: 62 RDSRSIHQYVFHAVQRALARHAGASPETTAGGH--AAHIEPSPRGPASFQATPLGQSQAA 119 >gi|156043737|ref|XP_001588425.1| hypothetical protein SS1G_10872 [Sclerotinia sclerotiorum 1980] gi|154695259|gb|EDN94997.1| hypothetical protein SS1G_10872 [Sclerotinia sclerotiorum 1980 UF-70] Length = 84 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M I+ L ++ QI + I + I EL++N LDA S+++ V+ + + DNG Sbjct: 1 MSIQPLPLDVVAQIKSSSTITSLNAVIFELVKNCLDASCSKIDIVV-DFSRGDCTVEDNG 59 Query: 61 FGMTSEEI 68 G+ E Sbjct: 60 LGILPSEF 67 >gi|114618407|ref|XP_001175196.1| PREDICTED: hypothetical protein [Pan troglodytes] Length = 118 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Query: 45 VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGA 102 + G +++ NG+G+ E+ +H TSKI + D + TFGFRGEAL S+ A Sbjct: 57 KLKDYGVDLIEVSGNGYGVEEEKFEGLTLKHHTSKIQEFADVPQVETFGFRGEALSSLCA 116 Query: 103 V 103 + Sbjct: 117 L 117 >gi|328850989|gb|EGG00148.1| hypothetical protein MELLADRAFT_112098 [Melampsora larici-populina 98AG31] Length = 896 Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 58/202 (28%), Gaps = 39/202 (19%) Query: 426 LVIVDQHAAHERLIFEKMRQDF--------NSTKITSQTLLTPEIIDLLEGECALIMEHD 477 +V+ DQHA ER+ EK + Q + + + E E Sbjct: 609 IVVFDQHAVDERIRVEKFLKQIILPELLVVKKIGKKGQDEIEGVRLRVSEVELEGFKRWK 668 Query: 478 EDLHRLGIKAER-------------FGPNAIAIREIPA--ILSKKNIPQLLRDIIDEIID 522 R G E G + + + + ++ + + Sbjct: 669 IRFKRYGFDYEIRRKEKEDEEEVWVIGLAEVVFKRLKKDGFFGLGEVMRMCLSFFESHQE 728 Query: 523 SSTTYT------------LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNS 570 L + I+ + AC GSI G ++ E RLL + K Sbjct: 729 EKEKKVGRQKDWMNGMKFLPGVLIEIINSKACRGSIMFGDQLNHEECQRLLDGLWKTDEP 788 Query: 571 SQCNHG----RPTFIKLKLSDI 588 C HG RP + +I Sbjct: 789 FYCAHGRMNCRPILNFMNPKEI 810 Score = 42.7 bits (99), Expect = 0.19, Method: Composition-based stats. Identities = 46/332 (13%), Positives = 103/332 (31%), Gaps = 82/332 (24%) Query: 2 KIRKLSEKIIN-------------------QIAAGEIIERPSIAIKELIENSLDAESSRV 42 I+ L K + QI SL ++ + + Sbjct: 8 SIQALDSKTSSLIKSSLSILSLKNLLESLLQI-------------------SLKSKPTLI 48 Query: 43 ETVIAGGGKSFFQITDNGFG--------MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRG 94 + + +I D+G G + S + R K++DD G+R Sbjct: 49 SCSL-NLSSKYLRIDDDGIGFNKPSIYEILSNNESLPNSR----KMNDD-----DLGYRL 98 Query: 95 EALP-----SIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPV----AMNPGTIVEVR 145 E L S+ ++ + + SR ++ QI P G+ + +R Sbjct: 99 EGLELQLFRSLVCLASVEICSRTEDSDETYQIIFQDGIRVFSGPAKTSRRHKTGSTLTIR 158 Query: 146 DLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKS------------- 191 +LF +P R + + Q + ++ +AI +P V+F ++ Sbjct: 159 NLFHNLPVRSKQLIINHQQDFLECKRSLQLLAILHPNVNFNLHNLEHSLPGQSDGLVEHE 218 Query: 192 -NRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQF 250 + Q T+ + + + + N + + ++G+ N + Sbjct: 219 FKESGVLIQKTHDSIITFGKILGPSLIKDAYIIENYEFDNYIVEGFLCKE--THLNKSGQ 276 Query: 251 YVFINGRTVQDKFILSTIRTAYAETIPLGRYP 282 +F++G+ + ++ + P Sbjct: 277 LIFLDGKLIPSTSLIYQRLSKSMSFSNNLGNP 308 >gi|118396563|ref|XP_001030620.1| hypothetical protein TTHERM_01044360 [Tetrahymena thermophila] gi|89284930|gb|EAR82957.1| hypothetical protein TTHERM_01044360 [Tetrahymena thermophila SB210] Length = 319 Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 89/261 (34%), Gaps = 41/261 (15%) Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYI--- 418 L N + + L + + N + +E+ + + + Sbjct: 44 LENDYQDISLADRNQNFNQQIQIFSKQSNEEVQQISQVSKLDRTIFEDIEIFGNCNNKVI 103 Query: 419 --ISQTTDGLVIVDQHAAHERLIFEKMRQDFNST-------------------------- 450 +Q L +DQHA HER+ +E F ++ Sbjct: 104 ICFNQQKGMLFGLDQHAIHERIRYEYFCNQFKASAFCLQYKQSRNEIDSKCINLSQRNKD 163 Query: 451 ----KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI---KAERFGPNAIAIREIPAI 503 I ++L + ++ + L + I K + N + P + Sbjct: 164 KQFPSILWFDQTRTNCLELDAYIFQRLQKNVDKLSQFKIQVVKIQNINQNKFEVYLWPQL 223 Query: 504 -LSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLR 562 + K I L+ ID I++S + + + I+ I+ + AC G+I+ ++ +M+ L++ Sbjct: 224 YILNKPITYDLK-FIDSILNSELGH-IPNTIDEIIMSKACKGAIKFNEELNQNQMDMLIK 281 Query: 563 EMEKNPNSSQCNHGRPTFIKL 583 ++ C HGR + Sbjct: 282 NIKLCEFPFYCVHGRSSIHPF 302 >gi|145349851|ref|XP_001419340.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579571|gb|ABO97633.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 64 Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 24/54 (44%) Query: 530 QDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKL 583 + +LA+ AC G+I G + E ++R + C HGRPT L Sbjct: 1 PRPLHRLLASKACRGAIMFGDTLNRDECEAIVRALRLTQMPFACAHGRPTCAPL 54 >gi|328478647|gb|EGF48295.1| DNA mismatch repair protein [Lactobacillus rhamnosus MTCC 5462] Length = 62 Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 24/47 (51%) Query: 548 SGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 + + + LL+++ + N C HGRP + +D+EK+F R Sbjct: 4 ANHHLDDQQARALLQKLPQCENPFNCPHGRPVLVHFSNTDLEKMFKR 50 >gi|258617815|gb|ACV83924.1| DNA mismatch repair protein MutL [Arthrospira platensis PCC 7345] Length = 95 Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats. Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Query: 59 NGFGMTSEEIPMAVQRHCTSKISD--DFSNIHTFGFRGEALPSIGAVSHLTL 108 NG GM + A H TSKI+ D I + GFRGEAL SI +S L + Sbjct: 2 NGEGMDLVNLKRAAMAHSTSKIATARDLLKISSLGFRGEALHSIAQLSDLEI 53 >gi|301112222|ref|XP_002905190.1| hypothetical protein PITG_07252 [Phytophthora infestans T30-4] gi|262095520|gb|EEY53572.1| hypothetical protein PITG_07252 [Phytophthora infestans T30-4] Length = 209 Score = 81.6 bits (200), Expect = 4e-13, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 85/210 (40%), Gaps = 22/210 (10%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKE----LIENSLDAESSRVETVIAGGGKSFFQI 56 M + L EK + ++A I A+K+ +I NS+DA++ + + SF + Sbjct: 1 MALSFLDEKTRDLMSASYAIPDLETAVKQGQFVVIYNSIDAQAKTITLFVDVANASFTAV 60 Query: 57 TDNGFGMTSEEI-PMAVQRHCTSKI-------SDDFSNIHTFGFRGEALPSIGAV-SHLT 107 D+G G+ +++ + + TS++ ++ + +G RG L + + +H+ Sbjct: 61 -DDGQGIQPDDLHEYIGECYATSRVPVSKCSRREEKPHKK-YGSRGAFLQELTTLAAHVE 118 Query: 108 LMSRPPQNNTGAQIAISGEKISSVRPV---AMNPGTIVEVRDLFFTIPARLNFLKSEQVE 164 + SR ++ T + + GT V V +LF +P R L + Sbjct: 119 IESRVQEHWTSYRKVFKEGAVVFNARSKELHKTAGTKVSVSNLFGKLPVRRKDLTRNRKY 178 Query: 165 TNLITDVIRR----MAIAYPKVSFTFSTIK 190 + I M++ +P +SF Sbjct: 179 RFRVVQNIHNFCVSMSMIWPSLSFDIRYEG 208 >gi|170091606|ref|XP_001877025.1| predicted protein [Laccaria bicolor S238N-H82] gi|164648518|gb|EDR12761.1| predicted protein [Laccaria bicolor S238N-H82] Length = 115 Score = 80.9 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 8/100 (8%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I L+ ++ + +I+ + EL++NSLDA + +++ + + + D+G G Sbjct: 5 IEALNSSTRAKLRSTQILTSLPQIVSELLQNSLDAGACQIDIGL-DCEEWSCWVKDDGSG 63 Query: 63 MTSEEIPMA-----VQRHCTSKISDDFS--NIHTFGFRGE 95 ++ + + + R+ TSK ++ TFGFRGE Sbjct: 64 ISKDGLNIIGGDGGEGRYGTSKECAPGFMNSLSTFGFRGE 103 >gi|238606735|ref|XP_002396795.1| hypothetical protein MPER_02897 [Moniliophthora perniciosa FA553] gi|215470012|gb|EEB97725.1| hypothetical protein MPER_02897 [Moniliophthora perniciosa FA553] Length = 78 Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 42/75 (56%), Gaps = 2/75 (2%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61 I +L+ ++ + +I+ + EL++NSLDA++ R+E + + +TD+G Sbjct: 5 PIEQLNPGTRAKLRSTQILTSLPQIVSELLQNSLDAKARRIEIGV-NCEEWTCWVTDDGQ 63 Query: 62 GMTSEEIPMAV-QRH 75 GM+ +++ + +R+ Sbjct: 64 GMSRDDLMLLGSERY 78 >gi|322828667|gb|EFZ32382.1| hypothetical protein TCSYLVIO_1277 [Trypanosoma cruzi] Length = 867 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 104/317 (32%), Gaps = 55/317 (17%) Query: 313 IIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ 372 +R+ + +I ++ + + S +N +T P A L ++ FL Sbjct: 549 QVRSAMHLTIDPSLFAPRAYSGPSVW---PGSGEMENKERTPCPFRAKHLIAQWDRKFLL 605 Query: 373 ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 + SD + E P S +G+ Q L IVD H Sbjct: 606 LQMNDVGEP--SDTSPFDEIGSPSSTSINGMPTMGVPPVLCKQPQSHYLPPPALYIVDPH 663 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA----- 487 A HERL E + + + + E + +++ L R G + Sbjct: 664 AIHERLRLEFFLTT-AESYVRRDIGPISVPVHIPEEIRRDVTTYEDFLARWGWRFAHENL 722 Query: 488 ---------------ERFGPNAIAIREIPAILSKKNIPQL---------LRDII------ 517 + +A+ + P + + ++ QL + +++ Sbjct: 723 QCTGLRSAMASKSRYTQLSWCCVAVTQWPHLEIEGHVLQLETIDALRKTVEELVTVLPSW 782 Query: 518 --------------DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 D I ++ + + L T +C G++ G + + M +L+ Sbjct: 783 QMPAATEKESSKECDWIGENPGARVVPSAVLEFLVTRSCRGAVMFGDSLSTATMVQLIGA 842 Query: 564 MEKNPNSSQCNHGRPTF 580 ++ + C+HGRP+F Sbjct: 843 LQAVEQYTLCSHGRPSF 859 >gi|309805581|ref|ZP_07699624.1| hypothetical protein HMPREF9213_0643 [Lactobacillus iners LactinV 09V1-c] gi|308165082|gb|EFO67322.1| hypothetical protein HMPREF9213_0643 [Lactobacillus iners LactinV 09V1-c] Length = 39 Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 25/37 (67%), Positives = 30/37 (81%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAE 38 KI KLS ++ NQIAAGE+IERP+ IKEL EN+LDA Sbjct: 3 KIHKLSSELTNQIAAGEVIERPASVIKELCENALDAG 39 >gi|313222326|emb|CBY39274.1| unnamed protein product [Oikopleura dioica] Length = 505 Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 2/173 (1%) Query: 155 LNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIG 214 + I DVIR +I Y K++F+ I ++ ++ + + I + Sbjct: 4 RQKSYNPNETFAKIADVIRAYSIHYEKLNFSLFRIDKSQTQVRSWNLP-DRKTIIEKTFS 62 Query: 215 EDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFY-VFINGRTVQDKFILSTIRTAYA 273 ++ +N + EI + G + +FIN R ++ K I I + Y Sbjct: 63 KEVSSNILTSKLTDEEIGVDGEIFFTSSVYCGKKFILLIFINNRLIESKQIKQIIESIYE 122 Query: 274 ETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 + +P G P V + + + R +DVNVHP K ++F + I + I + + + Sbjct: 123 DFLPRGSRPWVYINITMPGRNIDVNVHPTKMEVQFLHDERIYDLIKKKMDMFL 175 >gi|153878762|ref|ZP_02004678.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152064774|gb|EDN65322.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 106 Score = 78.9 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 28/85 (32%), Positives = 55/85 (64%) Query: 457 LLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDI 516 +L P + + E E L +H ++LG + RFGP + +R++PA+L+K NIP+L+RD+ Sbjct: 1 MLVPVNVSVSEREAELAEQHLNFFNQLGFEISRFGPEMLIVRQVPALLAKANIPRLVRDV 60 Query: 517 IDEIIDSSTTYTLQDRIENILATMA 541 + +++ + LQ+RI++I + ++ Sbjct: 61 LADLLRFGVSSRLQERIQDIFSDVS 85 >gi|71667114|ref|XP_820509.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70885857|gb|EAN98658.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 867 Score = 78.9 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 50/289 (17%), Positives = 95/289 (32%), Gaps = 52/289 (17%) Query: 341 MISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESE 400 S +N +T P A L ++ FL + SD + E P S Sbjct: 574 WPGSGEMENKERTPCPFRAKHLIAQWDRKFLLLQMNDVGEP--SDTSPFDEIGSPSSTSI 631 Query: 401 ATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTP 460 +G+ Q L IVD HA HERL E + + Sbjct: 632 NGMPTMGVPPVFCKQAQSHHLPPPALYIVDPHAIHERLRLEFFLTT-AESYVRRDIGPIS 690 Query: 461 EIIDLLEGECALIMEHDEDLHRLGIKA--------------------ERFGPNAIAIREI 500 + + E + +++ L R G + + +A+ + Sbjct: 691 VPVHIPEEIRRDVTTYEDFLARWGWRFAHENLQCTGIRSAMASKSRYTQLSWCCVAVTQW 750 Query: 501 PAILSKKNIPQL---------LRDII--------------------DEIIDSSTTYTLQD 531 P + + ++ QL + +++ D I++S + Sbjct: 751 PHLEIEGHVLQLETIDALRKTVEELVTVLPSWQMPAATEKESSKECDWIVESPGARVVPS 810 Query: 532 RIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + L T +C G++ G + + M +L+ ++ + C+HGRP+F Sbjct: 811 AVLEFLVTRSCRGAVMFGDSLSTATMAQLIGALQAVEQYTLCSHGRPSF 859 >gi|71425439|ref|XP_813109.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70877962|gb|EAN91258.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 868 Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 105/317 (33%), Gaps = 55/317 (17%) Query: 313 IIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQ 372 +R+ + +I ++ + + +++ P P A L ++ FL Sbjct: 550 QVRSAMHLTIDPSLFAPRAYSGPSVWPGPGEMENKERTPC---PFRAKHLIAQWDRKFLV 606 Query: 373 ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 ++ SD + E P S +G+ Q L IVD H Sbjct: 607 LQMNDMDE--HSDTSPFDEIGSPPSTSINGMPTMGVPPVLCKQPQSHHLPPPALYIVDPH 664 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA----- 487 A HERL E + + + + E + +++ L + G + Sbjct: 665 AIHERLRLEFFLTT-AESYVRRDIRPISVPVHIPEEIRRDVTTYEDFLAKWGWRFAHENL 723 Query: 488 ---------------ERFGPNAIAIREIPAILSKKNIPQL---------LRDII------ 517 + +A+ + P + + ++ QL + +++ Sbjct: 724 QCTGLRSAMASKSRYTQLSWCCVAVTQWPHLEIEGHVLQLETIDALRKTVEELVTVLPSW 783 Query: 518 --------------DEIIDSSTTYTLQDRIENILATMACYGSIRSGRKMQSIEMNRLLRE 563 D I +S+ + + L T +C G++ G + + M +L+ Sbjct: 784 QMPAATEKESSKECDWIGESAGARVVPSAVLEFLVTRSCRGAVMLGDSLSTATMVQLIGA 843 Query: 564 MEKNPNSSQCNHGRPTF 580 ++ + C+HGRP+F Sbjct: 844 LQAVEQYTLCSHGRPSF 860 >gi|114696938|ref|XP_519570.2| PREDICTED: similar to hPMSR6, partial [Pan troglodytes] Length = 46 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 28/40 (70%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRV 42 I+ + K ++QI +G ++ S A+KEL+ENSLDA ++ + Sbjct: 7 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNI 46 >gi|213025348|ref|ZP_03339795.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 139 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 57/119 (47%) Query: 250 FYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFR 309 Y ++NGR ++D+ I IR A + + + P VL LEIDP QVDVNVHPAK +RF Sbjct: 14 QYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFH 73 Query: 310 NPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 ++ +FI Q + + ++ +T + +N +A T + Sbjct: 74 QSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENRIAAGRNHFAVPAEPTAAR 132 >gi|221115731|ref|XP_002159366.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 498 Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 55/250 (22%), Positives = 107/250 (42%), Gaps = 11/250 (4%) Query: 134 VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETN---LITDVIRRMAIAYPKVSFTFSTIK 190 N GTIV V +LF +P R ++ + I +++ I PK+ T K Sbjct: 67 THHNVGTIVTVLNLFKALPVRRKLYENNRKVREEVKCIEELLISYGIGMPKLRITLKYDK 126 Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGI-----PTFNRG 245 + ++ + N +S + G + +NN E+ K E+ ++ Y R Sbjct: 127 NIIWR---KDRAANCSLVLSALFGSNVLNNLKEIEYKDEELQVKAYIPKVGSASNVVGRT 183 Query: 246 NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSY 305 A++ ++ +N R V+ K I S ++T+Y + G+YP VL++E+ P Q+DVN+HP K Sbjct: 184 LADRMFIIVNKRPVRSKEIKSLLKTSYNDNCCQGKYPFSVLMIEVKPDQIDVNLHPNKMD 243 Query: 306 IRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNT 365 I +N I+ + + + ++ + +++ S N+ Sbjct: 244 ILLQNTDILLEKLNKLLASVYSQSITRNITPEDNLVVNCEESSMQFANLTHLNTDSSLNS 303 Query: 366 QEKLFLQENR 375 +F ++ Sbjct: 304 LPSVFYDSSK 313 >gi|328769426|gb|EGF79470.1| hypothetical protein BATDEDRAFT_25830 [Batrachochytrium dendrobatidis JAM81] Length = 294 Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 20/89 (22%) Query: 517 IDEIIDSSTTYTLQDRIENILATMACY---------GSIRSGRKMQSIEMNRLLREMEKN 567 +++++ + +IL + AC +I+ G + + LL + K Sbjct: 71 LEQLLHEQPKSDI-----DILKSRACRKVTRSSMHKSAIKFGDYLSQSSCSFLLNSLSKC 125 Query: 568 PNSSQCNHGRPTFIKL------KLSDIEK 590 QC HGRPT + S +EK Sbjct: 126 KFPFQCAHGRPTISPIGYLPSASNSSLEK 154 >gi|157104804|ref|XP_001648577.1| hypothetical protein AaeL_AAEL004171 [Aedes aegypti] gi|108880225|gb|EAT44450.1| hypothetical protein AaeL_AAEL004171 [Aedes aegypti] Length = 655 Score = 74.3 bits (181), Expect = 5e-11, Method: Composition-based stats. Identities = 61/379 (16%), Positives = 126/379 (33%), Gaps = 48/379 (12%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQ------R 74 E + I LI+NSLDA + + I + QI DNG G++ E++ + Sbjct: 2 ESLTEIIVALIKNSLDANCTSIAIRICL-ELFWIQILDNGDGISREDLQSIGKCCLLNID 60 Query: 75 HCTSKISDDFSNIHTFGFRGEALPS-IGAVSHLTLMSRPPQNNTGAQIA----------- 122 H K S F+ + GE+L S I + + S + N G + Sbjct: 61 HDRKKPSKQFARLT-----GESLLSIIAQCEEVLIESVDSKTNHGKCHSRLFKQQTAISP 115 Query: 123 ------ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 + + +S + V + GT V ++++F+ R S + + + IR +A Sbjct: 116 RNEGSQRNFDSVSQYQYVRKSRGTTVTLKNVFYKNAERQRNH-SIKEDYQTLLVKIRTLA 174 Query: 177 IAYPKVSFTFST--IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 + + SFT +K S + ++ D + + + ++ Sbjct: 175 LVHYDRSFTVQDLANTEVVFKSKRLSAFLPKYCELYRLSETDIDV----TTCRKDNVLIE 230 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 Y + FING + E + ++ + +++ P Sbjct: 231 CYFSERRTRHPLSPIELTFINGLP------SGELMPTVNELLTQEKHNIDFVIVVTFP-- 282 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTS--SVLSKKMISSFHQDNAPK 352 +V + + I + Q + + T + + + + Sbjct: 283 -KNDVLTQLNEPVHHDEEDILYGLSQPVDDSQTTFDKCTKWLKTNDFDVPAEIGSTSKEQ 341 Query: 353 THLPKYATSLTNTQEKLFL 371 H K A + ++K+ Sbjct: 342 KHPSKKAPAANKERQKINF 360 >gi|116205249|ref|XP_001228435.1| hypothetical protein CHGG_10508 [Chaetomium globosum CBS 148.51] gi|88176636|gb|EAQ84104.1| hypothetical protein CHGG_10508 [Chaetomium globosum CBS 148.51] Length = 265 Score = 73.9 bits (180), Expect = 7e-11, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 69/179 (38%), Gaps = 37/179 (20%) Query: 419 ISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT--------PEIIDLLEGEC 470 S++ L+++DQHAA ER E + + + + S L P DL + + Sbjct: 85 ASESDPLLILIDQHAADERCKVENLLKAYFVSSPASTGQLVAQTQNLDKPLRFDLSKQDG 144 Query: 471 ALIMEHDEDLHRLGIKAERFGPN----AIAIREIPAILSKKN--IPQLLRDIIDE----I 520 L++ + G+ E + ++ +P + ++ P+LL D++ + + Sbjct: 145 DLLVRFKKHFAHWGVVYETLHERSPHVTVEVQSLPPSIVERCRLEPRLLIDLLRKEVWKL 204 Query: 521 IDSSTTYTLQDR-------------------IENILATMACYGSIRSGRKMQSIEMNRL 560 ++ ++ + I ++ + AC +I + + + ++L Sbjct: 205 HETGSSGARKQADKNRDDDDWVARFHDCPNGIMELINSRACRSAIMFNDPLTTEQSSKL 263 >gi|53729302|ref|ZP_00348376.1| COG0323: DNA mismatch repair enzyme (predicted ATPase) [Pasteuria nishizawae str. North American] Length = 248 Score = 73.9 bits (180), Expect = 8e-11, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 59/140 (42%) Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQF 250 N+ + +G V G + + E +++G P R + Sbjct: 7 QNKRSLLSAVGDGKLLHAFHSVFGSKVAQDFQLATTDTPEWSIEGIMARPVHTRSDRRGI 66 Query: 251 YVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRN 310 +NGR+V+ + + Y + GRYP+ V + +DP+ VD NVHPAK IR R Sbjct: 67 VWVVNGRSVRSNVLSQALLRGYETLLQRGRYPIAVFHIRLDPQWVDANVHPAKQIIRLRC 126 Query: 311 PTIIRNFIIQSIQKAINKKG 330 + I++ +++ + G Sbjct: 127 EKELGGAIVRLVRQTWEQAG 146 >gi|310128486|ref|XP_003120599.1| PREDICTED: mismatch repair endonuclease PMS2-like isoform 4, partial [Homo sapiens] Length = 464 Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats. Identities = 45/231 (19%), Positives = 81/231 (35%), Gaps = 24/231 (10%) Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAY 179 + KI P GT V V+ LF T+P R F ++ + E + V+ I Sbjct: 1 MFDHNGKIIQKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIIS 60 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGN--FPERISQVIGEDFINNAVELNEK---------- 227 + + + + T G+ E I V G+ + + + + Sbjct: 61 AGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEY 120 Query: 228 --------SNEITLQGYTGIPTFNRGNA--NQFYVFINGRTVQDKFILSTIRTAYAETIP 277 N + G+ T G + ++ + FIN R + + Y Sbjct: 121 GLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMY-N 179 Query: 278 LGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINK 328 +YP VVL + +D VD+NV P K I + ++ + S+ + Sbjct: 180 RHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDS 230 >gi|58736983|dbj|BAD89400.1| PMS1 nirs variant 3 [Homo sapiens] Length = 47 Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 26/43 (60%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVI 46 ++L + +++ +II +KELIENSLDA ++ V+ + Sbjct: 2 KQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKL 44 >gi|114696986|ref|XP_001154875.1| PREDICTED: putative postmeiotic segregation increased 2-like protein 3-like, partial [Pan troglodytes] Length = 129 Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 27/40 (67%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRV 42 I+ + K ++QI +G ++ S A+K L+ENSLDA ++ + Sbjct: 90 IKPIDRKSVHQICSGPVVLSLSTAVKGLVENSLDAGATNI 129 >gi|115761542|ref|XP_001198900.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115952204|ref|XP_001193528.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 52 Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 27/43 (62%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVI 46 KLS + + I++ ++I + +KEL+ENSLDA + VE + Sbjct: 10 HKLSGETVRLISSAQVITSVASVVKELLENSLDAHADNVEIKL 52 >gi|196017994|ref|XP_002118703.1| hypothetical protein TRIADDRAFT_62720 [Trichoplax adhaerens] gi|190578421|gb|EDV18811.1| hypothetical protein TRIADDRAFT_62720 [Trichoplax adhaerens] Length = 518 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 23/41 (56%), Positives = 29/41 (70%) Query: 535 NILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNH 575 I +AC+ SIR+GR + EMN+LLRE+EK P S QCNH Sbjct: 1 EIWGNIACHSSIRAGRVLNIDEMNQLLREIEKTPLSEQCNH 41 >gi|261328170|emb|CBH11147.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972] Length = 869 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 63/208 (30%), Gaps = 54/208 (25%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L I DQHA HERL E + + Q LT + + + ++ L R G Sbjct: 655 LFITDQHAIHERLRLEYFLA-HAESYVEPQPSLTTFPVKIPHDMRHCVAAYEGALKRWGW 713 Query: 486 KAER---------FGPNAI-------------AIREIPAILSKK-----NIPQLLRDIID 518 + F I I + P + + + LR ++ Sbjct: 714 RFSHNTPQPNLACFPEATIDFPDTPCPRKLFDTITQWPCLTLEGHRLVLDTVCALRQTLE 773 Query: 519 EIID--------------------------SSTTYTLQDRIENILATMACYGSIRSGRKM 552 EI + + T +C G+I G ++ Sbjct: 774 EIAAVFPASHVSALRATNTPEGDNCERHRRHHEFRVIPSAVLQFFVTRSCRGAIMFGDRI 833 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + L+ + S C+HGRP+F Sbjct: 834 KDEHAKLLVDSLRAVGQYSVCSHGRPSF 861 >gi|72389162|ref|XP_844876.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62358637|gb|AAX79095.1| hypothetical protein, conserved [Trypanosoma brucei] gi|70801410|gb|AAZ11317.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 869 Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 63/208 (30%), Gaps = 54/208 (25%) Query: 426 LVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGI 485 L I DQHA HERL E + + Q LT + + + ++ L R G Sbjct: 655 LFITDQHAIHERLRLEYFLA-HAESYVEPQPSLTTFPVKIPHDMRHCVAAYEGALKRWGW 713 Query: 486 KAER---------FGPNAI-------------AIREIPAILSKK-----NIPQLLRDIID 518 + F I I + P + + + LR ++ Sbjct: 714 RFSHNTPQPNLACFPEATIDFPDTPCPRKLFDTITQWPCLTLEGHRLVLDTVCALRQTLE 773 Query: 519 EIID--------------------------SSTTYTLQDRIENILATMACYGSIRSGRKM 552 EI + + T +C G+I G ++ Sbjct: 774 EIAAVFPASHVSALRATNTPEGDNCERHRRHHEFRVIPSAVLQFFVTRSCRGAIMFGDRI 833 Query: 553 QSIEMNRLLREMEKNPNSSQCNHGRPTF 580 + L+ + S C+HGRP+F Sbjct: 834 KDEHAKLLVDSLRAVGQYSVCSHGRPSF 861 >gi|270587911|ref|ZP_06221432.1| DNA mismatch repair protein domain protein [Haemophilus influenzae HK1212] gi|270318472|gb|EFA29574.1| DNA mismatch repair protein domain protein [Haemophilus influenzae HK1212] Length = 80 Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats. Identities = 34/80 (42%), Positives = 47/80 (58%) Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 P F+R + Y +INGR V+DK I IR AYA+ +P YP VL ++++P VD Sbjct: 1 MATPNFSRTQNDLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVD 60 Query: 297 VNVHPAKSYIRFRNPTIIRN 316 VNVHP K +RF +I + Sbjct: 61 VNVHPTKHEVRFHQQRLIHD 80 >gi|223997578|ref|XP_002288462.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975570|gb|EED93898.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 324 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 57/156 (36%), Gaps = 19/156 (12%) Query: 410 CAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKM-------------------RQDFNST 450 +Q+ +I+ + L +VDQHAA ER+ E + ++ + Sbjct: 165 ISQVEAKFIVIKANGKLCVVDQHAADERISLEMLERALFNPNLADDTVIKMTKKKLKVAD 224 Query: 451 KITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIP 510 + +L + I L + + A H L + E ++ + +P++ + Sbjct: 225 ILKPTQVLPAKRIALTQSQLAAARHHFSLLQKWKFTFEEPSDKSLILTGVPSVCGRVVNV 284 Query: 511 QLLRDIIDEIIDSSTTYTLQDRIENILATMACYGSI 546 + E+ ++ ILA+ AC +I Sbjct: 285 NDFVAFVKELSHHRGGEIKPACVKRILASQACRYAI 320 >gi|4688764|emb|CAB41368.1| MutL protein [Escherichia coli] gi|4688768|emb|CAB41370.1| MutL protein [Escherichia coli] Length = 112 Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 1/112 (0%) Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A+A V+ S + G R+ + G F+ A+ + + ++TL+G Sbjct: 1 ALARFDVTINLSHNGKMVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRG 60 Query: 236 YTGIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 + P A Y ++NGR ++D+ I IR A + + + P VL Sbjct: 61 WVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVL 112 >gi|73989706|ref|XP_859198.1| PREDICTED: similar to MutL protein homolog 1 isoform 3 [Canis familiaris] Length = 516 Score = 68.5 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 1/141 (0%) Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 + GY ++ +FIN R V+ + I T YA +P +P + L LEI P Sbjct: 1 MNGYISNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISP 59 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPK 352 + VDVNVHP K + F + I + Q I+ + S + Sbjct: 60 QNVDVNVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEVV 119 Query: 353 THLPKYATSLTNTQEKLFLQE 373 S T + +K++ + Sbjct: 120 KSTTGATPSSTGSGDKVYAHQ 140 >gi|4688774|emb|CAB41373.1| MutL protein [Escherichia coli] gi|4688786|emb|CAB41379.1| MutL protein [Escherichia coli] Length = 112 Score = 68.5 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 1/112 (0%) Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A+A V+ + S + G R+ + G F+ A+ + + ++TL+G Sbjct: 1 ALARFDVTISLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRG 60 Query: 236 YTGIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 + P A Y ++NGR ++D+ I IR A + + + P VL Sbjct: 61 WVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVL 112 >gi|224536168|ref|ZP_03676707.1| hypothetical protein BACCELL_01034 [Bacteroides cellulosilyticus DSM 14838] gi|224522208|gb|EEF91313.1| hypothetical protein BACCELL_01034 [Bacteroides cellulosilyticus DSM 14838] Length = 63 Score = 68.5 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%) Query: 546 IRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 I G+ + + EM L+ + P + GR +K DIEKLF R Sbjct: 15 IVYGQVLSNEEMANLVDNLFACPTPNYTPDGRTVLSTIKEEDIEKLFAR 63 >gi|30851293|gb|AAH52588.1| PMS2L5 protein [Homo sapiens] Length = 114 Score = 68.5 bits (166), Expect = 3e-09, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 28/40 (70%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRV 42 I+ + K ++QI +G ++ S A+K+++ENSLDA ++ + Sbjct: 34 IKPIDRKSVHQICSGPVVLSLSTAVKKIVENSLDAGATNI 73 >gi|327297971|ref|XP_003233679.1| hypothetical protein TERG_05552 [Trichophyton rubrum CBS 118892] gi|326463857|gb|EGD89310.1| hypothetical protein TERG_05552 [Trichophyton rubrum CBS 118892] Length = 593 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 51/272 (18%), Positives = 91/272 (33%), Gaps = 33/272 (12%) Query: 106 LTLMSRPPQNNTG-AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQV 163 + + +R P+ + S P + GT V V D ++P R K Sbjct: 5 MYITTRVPEEQVARTVKFGRDGEPISDTPASHPIGTTVRVCDFLKSLPVRRQEAEKKSTK 64 Query: 164 ETNLITDVIRRMAIAYPKVSFTFSTIK-SNRYKMNFQSTNGNFPERISQVIGEDFINNAV 222 I ++R AIA PK + +K + + S + P+ I QVIG I++ + Sbjct: 65 SILAIKKLLRGYAIARPKTRLSMRVLKSKEKDWVYAPSQKPSVPDAILQVIGSTVISSCI 124 Query: 223 E------------------LNEKSNEITLQGYTGIP---TFNRGNANQFYVFINGRTVQD 261 N + I + P R N +V ++ R + Sbjct: 125 SSNASYPIPGEKDSPDSMVENYDTPTIHMSVIVPKPEAECMARINHKGQFVIVDARPLLT 184 Query: 262 -----KFILSTIRTAYAETIPLG--RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTII 314 K + ++ Y + I P + L L+ P D N+ P+K I F + + Sbjct: 185 CMGFGKEVFKLFKSYYKKAIDYNILEDPFMFLSLDCPPGIYDANIEPSKDDILFEDNQAV 244 Query: 315 RNFIIQSIQ--KAINKKGISTSSVLSKKMISS 344 I ++ I + + S+ Sbjct: 245 LQIIESVFMGIYSLETSTIIPTPDTRQSYSSN 276 >gi|4688706|emb|CAB41444.1| MutL [Escherichia coli] gi|4688708|emb|CAB41445.1| MutL [Escherichia coli] gi|4688710|emb|CAB41356.1| MutL protein [Escherichia coli] gi|4688712|emb|CAB41357.1| MutL protein [Escherichia coli] gi|4688714|emb|CAB41358.1| MutL protein [Escherichia coli] gi|4688716|emb|CAB41359.1| MutL protein [Escherichia coli] gi|4688718|emb|CAB41360.1| MutL protein [Escherichia coli] gi|4688720|emb|CAB41361.1| MutL protein [Escherichia coli] gi|4688722|emb|CAB41362.1| MutL protein [Escherichia coli] gi|4688724|emb|CAB41363.1| MutL protein [Escherichia coli] gi|4688726|emb|CAB41364.1| MutL protein [Escherichia coli] gi|4688760|emb|CAB41366.1| MutL protein [Escherichia coli] gi|4688762|emb|CAB41367.1| MutL protein [Escherichia coli] gi|4688766|emb|CAB41369.1| MutL protein [Escherichia coli] gi|4688770|emb|CAB41371.1| MutL protein [Escherichia coli] gi|4688772|emb|CAB41372.1| MutL protein [Escherichia coli] gi|4688776|emb|CAB41374.1| MutL protein [Escherichia coli] gi|4688780|emb|CAB41376.1| MutL protein [Escherichia coli] gi|4688782|emb|CAB41377.1| MutL protein [Escherichia coli] gi|4688784|emb|CAB41378.1| MutL protein [Escherichia coli] gi|4688788|emb|CAB41380.1| MutL protein [Escherichia coli] gi|7838183|emb|CAB91632.1| MutL protein [Escherichia coli] gi|7838193|emb|CAB91637.1| MutL protein [Escherichia coli] gi|7838195|emb|CAB91638.1| MutL protein [Escherichia coli] Length = 112 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 1/112 (0%) Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A+A V+ S + G R+ + G F+ A+ + + ++TL+G Sbjct: 1 ALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRG 60 Query: 236 YTGIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 + P A Y ++NGR ++D+ I IR A + + + P VL Sbjct: 61 WVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVL 112 >gi|88854620|ref|ZP_01129287.1| RNA polymerase sigma factor [marine actinobacterium PHSC20C1] gi|88816428|gb|EAR26283.1| RNA polymerase sigma factor [marine actinobacterium PHSC20C1] Length = 1108 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 72/201 (35%), Gaps = 19/201 (9%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETV--IAGGGKSFFQITD 58 M ++ +++ I G + AI +LI+NS+DA + R+ + G +I D Sbjct: 23 MSLKP-DPSVLSAIGRG---HSLNSAIADLIDNSIDAGAERISIRFMVDSGLVKSIRIAD 78 Query: 59 NGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTL-MSRPPQN 115 +G GM S+++ A+ K ++ + G G L S+ + L + S + Sbjct: 79 DGTGMNSDQLIDAMTLGKQRK-----YDVDSLGHFGMGLKAASMSQGACLRVFTSCGYEA 133 Query: 116 NTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 G ++ + + V + + + V + D + Sbjct: 134 MHGVRMLRNDVGGNFDIEVLTESAAW-----AGYHLGTHRGIQSTGTVVEWSLLDAVSVA 188 Query: 176 AIAYPKVSFTFSTIKSNRYKM 196 A + + I R ++ Sbjct: 189 AAPSVRQRWLDGVINDLRGEL 209 >gi|225858035|ref|YP_002739545.1| MutL [Streptococcus pneumoniae 70585] gi|225721567|gb|ACO17421.1| MutL [Streptococcus pneumoniae 70585] Length = 66 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 18/32 (56%) Query: 563 EMEKNPNSSQCNHGRPTFIKLKLSDIEKLFGR 594 ++ + N C HGRP + SD+EK+F R Sbjct: 21 QLSQCDNPYNCPHGRPVLVHFTKSDMEKMFRR 52 >gi|68011496|ref|XP_671165.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56487098|emb|CAI03947.1| hypothetical protein PB301453.00.0 [Plasmodium berghei] Length = 112 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 540 MACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTF-IKLKLSDIEK 590 AC ++ G+ + EM + +++ N C HGRPT + +I+K Sbjct: 10 RACRNAVMVGKTLNISEMIXIKKKLSVLKNPWNCPHGRPTIKYIINNIEIQK 61 >gi|332215528|ref|XP_003256896.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 3 [Nomascus leucogenys] gi|332215530|ref|XP_003256897.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 4 [Nomascus leucogenys] gi|332215532|ref|XP_003256898.1| PREDICTED: DNA mismatch repair protein Mlh1 isoform 5 [Nomascus leucogenys] Length = 515 Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 1/94 (1%) Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 + GY ++ +FIN R V+ + I T YA +P +P + L LEI P Sbjct: 1 MNGYISNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISP 59 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 + VDVNVHP K + F + I + Q I+ + Sbjct: 60 QNVDVNVHPTKHEVHFLHEESILERVQQHIESKL 93 >gi|158514350|gb|ABW69167.1| MutL-like 1 protein [Homo sapiens] Length = 133 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 1/115 (0%) Query: 231 ITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 + GY ++ +FIN R V+ + I T YA +P +P + L LEI Sbjct: 20 FKMNGYISNANYS-VKKCILLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEI 78 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSF 345 P+ VDVNVHP K + F + I + Q I+ + S K+ F Sbjct: 79 SPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMYFTQKETSGRF 133 >gi|312129201|ref|YP_003996541.1| histidine kinase [Leadbetterella byssophila DSM 17132] gi|311905747|gb|ADQ16188.1| histidine kinase [Leadbetterella byssophila DSM 17132] Length = 772 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 31/154 (20%) Query: 3 IRKLSEKIIN-QIAAGEIIERP--------SIAIKELIENSLDAESSRVETVIAG----G 49 I KL + + + AG II R A+ EL++N+ DA+++ V V G Sbjct: 35 IAKLDDSQVRFSVDAG-IINRLGKELVGKHETAVSELVKNAFDADATEVNLVFENAWNAG 93 Query: 50 GKSFFQITDNGFGMTSEEIPMAVQRHCTS-KIS---DDFSNIHTFGFRGEALPSIGAV-- 103 G I DNG GMT +++ R +S KI D G +G IG Sbjct: 94 GT--VTIEDNGTGMTKDQLINGFMRLSSSDKIHNPVSDKYKRTRAGRKG-----IGRFAT 146 Query: 104 ----SHLTLMSRPPQNNTGAQIAISGEKISSVRP 133 S LT+++ ++ + +I+I+ + + Sbjct: 147 QRLGSRLTIITHTAKSESSIKISINWNDFETDKD 180 >gi|332144382|dbj|BAK19909.1| putative DNA mismatch repair protein [Streptomyces rochei] Length = 648 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAG---GGKSFFQITDNGFGMTSEEIPMAVQ 73 P A++EL+ NSLDA+++ V + GG + DNG G+ + A + Sbjct: 19 TDPLGAVEELVWNSLDADATEVHVELELDDFGGVQAVVVRDNGHGIPAATAESAFK 74 >gi|30795107|ref|NP_851557.1| hypothetical protein pSLA2-L_p136 [Streptomyces rochei] gi|30698480|dbj|BAC76593.1| hypothetical protein [Streptomyces rochei] Length = 648 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAG---GGKSFFQITDNGFGMTSEEIPMAVQ 73 P A++EL+ NSLDA+++ V + GG + DNG G+ + A + Sbjct: 19 TDPLGAVEELVWNSLDADATEVHVELELDDFGGVQAVVVRDNGHGIPAATAESAFK 74 >gi|282601458|ref|ZP_06258063.1| ATPase [Subdoligranulum variabile DSM 15176] gi|282568968|gb|EFB74503.1| ATPase [Subdoligranulum variabile DSM 15176] Length = 484 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 117/343 (34%), Gaps = 34/343 (9%) Query: 22 RPSIAIKELIENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 + A+ +LI+NS+ A+++R+ G + I+DNG+GMT +E+ A++ SK Sbjct: 10 DIATAVADLIDNSITAQANRISVQFEWNNGNPWISISDNGYGMTEDELFEAMKPG--SKN 67 Query: 81 SDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNP 138 D + + G G L S+ LT+ S+ I N Sbjct: 68 PLDERSENDLGRFGLGLKTASLSQCKRLTVASKKDGG------RICCRCWDLDVVTQKNA 121 Query: 139 GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNF 198 +++V + + K I + I R+ + Y+ F Sbjct: 122 WLLLKVPTETAATIIQKHLDKCPSGTIV-IWEKIDRI--------IPGEHVGDEEYQRAF 172 Query: 199 QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRT 258 + + ERI V+ +++ ++ + N + + P + R Sbjct: 173 LNYAQSVKERI-SVVFSSYMSGPHKVAFEMNGREISMW--DPFMTDNP-------LTTRM 222 Query: 259 VQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRN-- 316 + ++ I + + + N + + FRN +I Sbjct: 223 PTEYLYVNGNEVKIKTFILPHQKKLSSNEFSLYAGAHGWNA--QQGFYIFRNNRLIVEGS 280 Query: 317 FIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 +++ +KA + + + S ++ D T +P + Sbjct: 281 WLLNGFEKAEQYRLARIRIDIGNETDSEWNIDVRKSTAVPPIS 323 >gi|221044260|dbj|BAH13807.1| unnamed protein product [Homo sapiens] Length = 460 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 1/94 (1%) Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 + GY ++ +FIN R V+ + I T YA +P +P + L LEI P Sbjct: 1 MNGYISNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISP 59 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 + VDVNVHP K + F + I + Q I+ + Sbjct: 60 QNVDVNVHPTKHEVHFLHEESILERVQQHIESKL 93 >gi|263191713|ref|NP_001161090.1| DNA mismatch repair protein Mlh1 isoform 3 [Homo sapiens] gi|263191733|ref|NP_001161091.1| DNA mismatch repair protein Mlh1 isoform 3 [Homo sapiens] gi|119584887|gb|EAW64483.1| mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli), isoform CRA_a [Homo sapiens] gi|119584888|gb|EAW64484.1| mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli), isoform CRA_a [Homo sapiens] gi|194379946|dbj|BAG58325.1| unnamed protein product [Homo sapiens] gi|194390916|dbj|BAG60576.1| unnamed protein product [Homo sapiens] gi|221045536|dbj|BAH14445.1| unnamed protein product [Homo sapiens] gi|221045916|dbj|BAH14635.1| unnamed protein product [Homo sapiens] Length = 515 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 1/94 (1%) Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 + GY ++ +FIN R V+ + I T YA +P +P + L LEI P Sbjct: 1 MNGYISNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISP 59 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 + VDVNVHP K + F + I + Q I+ + Sbjct: 60 QNVDVNVHPTKHEVHFLHEESILERVQQHIESKL 93 >gi|159897058|ref|YP_001543305.1| hypothetical protein Haur_0529 [Herpetosiphon aurantiacus ATCC 23779] gi|159890097|gb|ABX03177.1| hypothetical protein Haur_0529 [Herpetosiphon aurantiacus ATCC 23779] Length = 609 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 90/583 (15%), Positives = 180/583 (30%), Gaps = 72/583 (12%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 P+ + EL+ N+ DA+++ V I I DNG GM+ E+ R K D Sbjct: 27 PA-VLSELVANAWDADATEVSINIRQ---DEIVIQDNGIGMSIEDANTKFLRIGHQKRED 82 Query: 83 DFSNI---HTFGFRGE---ALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAM 136 + I H G +G A+ I ++ + S G I + V + Sbjct: 83 SANTISGRHVMGRKGIGILAIFGIANIA--EVYSCKDGVPHGFIIRKGDIERGISSDVTL 140 Query: 137 NPGTIVEVRDLF----FTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI--- 189 + V DL I R E L TD+ RR I +F+ Sbjct: 141 YRPSPVPQDDLSIESGTKIILREIKSSIVNAEKTLRTDLARRFTIINNNCNFSVIINNIP 200 Query: 190 ---------KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 ++ + + + +++ I N V+ G P Sbjct: 201 ISDNDRDYLNKVQFLWYLGEESSKYADFFTKLKKSFEITNLVDGMSGITVKGWIGTVYRP 260 Query: 241 TFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNV- 299 + + +F +G+ +Q+ ++ +G + + + + N Sbjct: 261 SNIPTSHRTISIFAHGKMIQEDILIDITDAGVYRQYIIGEIEADFMDSDDEDDIITSNRQ 320 Query: 300 -----HPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTH 354 P + I I + SS +++ + + Sbjct: 321 RIKQTDPRYLKLLQYVKADIMRVIASMWTNLRKEYPSKPKKEEVNDSSSSKDANSSEQEN 380 Query: 355 LPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH 414 + S T ++++ D S +D + E Q Sbjct: 381 TNASSDSSNTTDASSDSSNTTDASSETNDGDVEDNSFFDDDIPEPSPPPKQEITT----- 435 Query: 415 QNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIM 474 + + + + + +I ++Q + K TS + +LEG + Sbjct: 436 ---AFREMKNLVKNSNIPDQMKNIILYDIQQAAYAYKGTSFKACIVMLGAILEGVMLGTI 492 Query: 475 EHDEDLHRLGIKAERFGPNAIAIREIP---AILSKKNIPQLLRDIIDEIIDSSTT-YTLQ 530 + + L L I ++ +P + L +N R ++ + I ++ + + Sbjct: 493 QRTDVLEYL-----------ITLQTVPKPLSDLGPRNPKFADRTVLAQYIGTTFSFQDCK 541 Query: 531 DRIE-----------NILATMACYGSIRSGRKMQSIEMNRLLR 562 + IE +IL T+ SI G + +M +L R Sbjct: 542 EIIELCVQGTNKLGVDILQTV--RNSIHPGSVL--KDMKQLAR 580 >gi|332816402|ref|XP_003339085.1| PREDICTED: DNA mismatch repair protein Mlh1 [Pan troglodytes] gi|332816404|ref|XP_003309742.1| PREDICTED: DNA mismatch repair protein Mlh1 [Pan troglodytes] gi|332816406|ref|XP_003309744.1| PREDICTED: DNA mismatch repair protein Mlh1 [Pan troglodytes] Length = 515 Score = 67.8 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 1/94 (1%) Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 + GY ++ +FIN R V+ + I T YA +P +P + L LEI P Sbjct: 1 MNGYISNANYSVKKCIFL-LFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISP 59 Query: 293 RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI 326 + VDVNVHP K + F + I + Q I+ + Sbjct: 60 QNVDVNVHPTKHEVHFLHEESILERVQQHIESKL 93 >gi|297671750|ref|XP_002813993.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Pongo abelii] Length = 48 Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats. Identities = 20/31 (64%), Positives = 28/31 (90%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIEN 33 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIEN 38 >gi|12621959|gb|AAA21471.2| DNA mismatch repair protein [Trypanosoma rangeli] Length = 158 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 60/146 (41%), Gaps = 8/146 (5%) Query: 90 FGFRGEALPSIGAVSHLTLMSRP-PQNNTGAQIAISGEKISSVRPVAM---NPGTIVEVR 145 GFRGEAL + +S +T+ + I + + + NPGT V V Sbjct: 11 LGFRGEALHCLANLSEVTIQTMTVASQPVTLCITYDIKAHRTSVRASRERNNPGTTVLVE 70 Query: 146 DLFFTIPAR-LNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI---KSNRYKMNFQST 201 +F +P R F K+++ + T ++++ A+++P V + +S + + Sbjct: 71 KIFRALPVRHREFTKNKKKQLLAATLLMKQYALSHPHVRLLVAHCLGPRSAPTTLVSLTG 130 Query: 202 NGNFPERISQVIGEDFINNAVELNEK 227 + +++ G ++ + + Sbjct: 131 TSDLQRALAEAYGGRYLASTTRTAPE 156 >gi|34558221|ref|NP_908036.1| Signal transduction histidine kinase [Wolinella succinogenes DSM 1740] gi|34483940|emb|CAE10936.1| HYPOTHETICAL PROTEIN-Signal transduction histidine kinase [Wolinella succinogenes] Length = 761 Score = 67.0 bits (162), Expect = 8e-09, Method: Composition-based stats. Identities = 46/256 (17%), Positives = 92/256 (35%), Gaps = 50/256 (19%) Query: 2 KIRKLSEKIIN--------QIAAG-------EIIERPSIAIKELIENSLDAESSRVETVI 46 KI KLS ++ I AG E++ R A+ EL++N+ DA++ +V+ Sbjct: 23 KILKLSSELSKYDQDSVRFSIDAGIIDRLGKELVARHETAVSELVKNAYDADAKKVKLTF 82 Query: 47 AG----GGKSFFQITDNGFGMTSEEIPMAVQRHCTS-KIS---DDFSNIHTFGFRGEALP 98 GG I D+G GMT E++ R +S KI N G +G Sbjct: 83 IDSSEIGGI--IVINDDGVGMTKEQLVNGFMRLASSDKIHFPFSPIYNRKRAGKKG---- 136 Query: 99 SIGAVS------HLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFT-I 151 IG + LT+ ++ + +I I+ + + + ++ + + + Sbjct: 137 -IGRFAAQRLGKQLTITTQTEDSEQALEITINWNDFKNDQDLMF-----IDNKIEYKNRM 190 Query: 152 PARLNFLKSEQVETNLITDVIRRMAIAYPKVSF--------TFSTIKSNRYKMNFQSTNG 203 P + + + + + + + +K+ + +G Sbjct: 191 PKKRSGTRLVIRDLRDKWTEAQIKRVYRYASEILQPFPLAKVKLKTEDPGFKLICKRKDG 250 Query: 204 NFPERISQVIGEDFIN 219 +F E I+ F + Sbjct: 251 DFSEIIANDNTMFFEH 266 >gi|297680192|ref|XP_002817886.1| PREDICTED: putative postmeiotic segregation increased 2-like protein 12-like, partial [Pongo abelii] Length = 93 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Query: 83 DFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPGTI 141 D +++ TF F+GEAL S+ A+S +T+ + G ++ KI P GT Sbjct: 9 DLTDVETFSFQGEALTSLCALSDVTISTCHASAKVGTRLVFDHNGKIIQKTPYPHPRGTT 68 Query: 142 VEVRDLFFTIPARLNFLKSE 161 V + +F T+P R + Sbjct: 69 VSTKQVFSTLPVRHKEFQRN 88 >gi|238568410|ref|XP_002386420.1| hypothetical protein MPER_15318 [Moniliophthora perniciosa FA553] gi|215438403|gb|EEB87350.1| hypothetical protein MPER_15318 [Moniliophthora perniciosa FA553] Length = 56 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 26/41 (63%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRV 42 I+ + ++QI + +++ A++EL+ENSLDA ++ + Sbjct: 16 TIKAIDANSVHQITSRQVVIDLHTAVEELVENSLDAGATSI 56 >gi|257784579|ref|YP_003179796.1| ATP-binding region ATPase domain-containing protein [Atopobium parvulum DSM 20469] gi|257473086|gb|ACV51205.1| ATP-binding region ATPase domain protein [Atopobium parvulum DSM 20469] Length = 361 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 7/85 (8%) Query: 20 IERPSIAIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 I + EL+ NS DA + + G I D+G G+ + + TS Sbjct: 48 IRSVEDIVIELLRNSRDAGARHIYVATSKEGALRTITILDDGQGIPKDMQEKIFEARVTS 107 Query: 79 KISD---DFSNIHTFGFRGEALPSI 100 K+ D IH G RG AL SI Sbjct: 108 KLESMHMDRWGIH--G-RGMALYSI 129 >gi|4688778|emb|CAB41375.1| MutL protein [Escherichia coli] gi|7838197|emb|CAB91639.1| MutL protein [Escherichia coli] Length = 112 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 1/112 (0%) Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A+A V+ S + S G R+ + G F+ A+ + + ++TL+G Sbjct: 1 ALARFDVTINLSHNGKIVRQYRAVSEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRG 60 Query: 236 YTGIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 + P A Y ++NGR ++D+ I IR A + + + P VL Sbjct: 61 WVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLRADQQPAFVL 112 >gi|4688728|emb|CAB41365.1| MutL protein [Escherichia coli] Length = 112 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 1/112 (0%) Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 A+A V+ S + G R+ + G F+ A+ + + ++TL+G Sbjct: 1 ALARLDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRG 60 Query: 236 YTGIPTFNRGN-ANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 + P A Y ++NGR ++D+ I IR A + + + P VL Sbjct: 61 WVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVL 112 >gi|302335740|ref|YP_003800947.1| ATP-binding region ATPase domain protein [Olsenella uli DSM 7084] gi|301319580|gb|ADK68067.1| ATP-binding region ATPase domain protein [Olsenella uli DSM 7084] Length = 359 Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 14/128 (10%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSKISD-- 82 + E++ NS DA + R+ A GG + + D+G G+ + TSK+ Sbjct: 54 VVVEMLRNSRDAGARRIFVATARGGDTRTLTVVDDGSGIPQDMRERVFDARVTSKLESMR 113 Query: 83 -DFSNIHTFGFRGEALPSI---GAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNP 138 D +H G RG AL S+ + + + + G+ I + + + Sbjct: 114 MDRWGVH--G-RGMALFSVRENASSARV----MDSAPDKGSSIRVVTDATRLPERADQSS 166 Query: 139 GTIVEVRD 146 V D Sbjct: 167 WPSVGADD 174 >gi|242221364|ref|XP_002476432.1| predicted protein [Postia placenta Mad-698-R] gi|220724316|gb|EED78368.1| predicted protein [Postia placenta Mad-698-R] Length = 722 Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 15/78 (19%) Query: 33 NSLDAESSRVETVI--AGGGKSFFQITDNGFGMTSEEIPMA-----VQRHCTSKISD--D 83 NSLDA++ ++ + F + D+G G+ + + V R+ TSK Sbjct: 20 NSLDADARHIDIGVDCED---WSFWVRDDGVGIDRKGFDVLAGGAEVGRYGTSKAYTPAS 76 Query: 84 FSNIHTFGFRGE---ALP 98 + TFGFRGE AL Sbjct: 77 LDQVSTFGFRGEETFALA 94 Score = 39.3 bits (90), Expect = 2.0, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 2/105 (1%) Query: 280 RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSK 339 + P VL L I P+ VD V PAK+ ++ +N + F+ ++ + + G + + Sbjct: 148 KKPAYVLKLSIPPQHVDNCVEPAKTVVQLQNTGAVTAFLASVVESFLIRHGFVAQRIRQR 207 Query: 340 KMIS--SFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLL 382 S + D P + S + E+ ++ S + Sbjct: 208 NDSSCRTLQTDMHPPRKRRRVTLSTKRSHEQDTVRPGSPSFRGAI 252 >gi|145593134|ref|YP_001157431.1| hypothetical protein Strop_0572 [Salinispora tropica CNB-440] gi|145302471|gb|ABP53053.1| hypothetical protein Strop_0572 [Salinispora tropica CNB-440] Length = 504 Score = 65.8 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 18/128 (14%) Query: 30 LIENSLDAESSRVETVIAGGGKSFF--QITDNGFGMTSEEIPMA----VQRHCTSKISDD 83 L++NSLDA ++ + G + DNG G+ E I A QR T +D Sbjct: 39 LVDNSLDAGATEILIRFVQWGTRLVGLYVVDNGRGIAPESIDDAMTVGGQRQYT---GND 95 Query: 84 FSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQ-NNTGAQIAISGEKISSVRPVAMNPGT 140 G G L S + LT++SR G + + + S + + Sbjct: 96 L------GHFGLGLKAASFSQAASLTVLSRAAGRKPVGRRWQLDLVRHSFDCDIVPDSFV 149 Query: 141 IVEVRDLF 148 E+ + Sbjct: 150 AAELNRDW 157 >gi|183582331|dbj|BAG28293.1| mismatch repair protein [Mesocricetus auratus] Length = 38 Score = 65.8 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 20/31 (64%), Positives = 28/31 (90%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIEN 33 IR+L E ++N+IAAGE+I+RP+ AIKE+IEN Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIEN 38 >gi|332019180|gb|EGI59690.1| hypothetical protein G5I_12092 [Acromyrmex echinatior] Length = 552 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 545 SIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIK-LKLSDIEKL 591 +I+ G K+ E L++ ++ ++C HGRPT I ++ S++ K Sbjct: 491 AIKFGDKLTLEECTNLIQLLKNTKFPNRCAHGRPTIIPVIEFSELGKR 538 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 86/246 (34%), Gaps = 25/246 (10%) Query: 105 HLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVE 164 LT+ SR + A E +++ V P V F + + ++ + Sbjct: 37 RLTITSRHQHSEETFMKAFEMESSFNLKQVEQRPSCGTTVSIYGF------HEMPHKKWD 90 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE- 223 T++I +I +A+ +VSF+ + + + + + E + ++G+D N V Sbjct: 91 TSIICFLIAAIAVTKLEVSFSIRDDERKKVVLRIAKPHNSI-EVLRTLVGKDLPLNHVWS 149 Query: 224 -LNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETI------ 276 GY G+ N ++F+N R + IL I+ + E + Sbjct: 150 IQCGSERNSNYHGYVGLSDKNA----MQWIFLNHRLIYCPLILKLIKIVFEEKLNLFSDQ 205 Query: 277 -PLGRYPV---VVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332 R P V +L + Q + K I F + + N + + + K Sbjct: 206 KSNARDPYDENVFILFFLTFSQKEFTRENGK--IMFHDMQKVLNTVKNCAFQCLADKATV 263 Query: 333 TSSVLS 338 + Sbjct: 264 SVITPY 269 >gi|303233277|ref|ZP_07319949.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4] gi|302480667|gb|EFL43755.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4] Length = 411 Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 7/81 (8%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSKISD-- 82 A+ EL+ NS DA + + + + D+G G+ + TSK++ Sbjct: 77 AVIELLRNSYDAGAHTIYIASERQETTRTLVVIDDGCGIPRALHKTVFEARVTSKLNSMH 136 Query: 83 -DFSNIHTFGFRGEALPSIGA 102 D +H G RG AL SI Sbjct: 137 TDAWGVH--G-RGMALYSIAQ 154 >gi|110164969|gb|ABG49483.1| MLH1+ins1a isoform [Homo sapiens] Length = 48 Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats. Identities = 19/31 (61%), Positives = 27/31 (87%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIEN 33 IR+L E ++N+IAAGE+I+RP+ IKE+IEN Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANTIKEMIEN 38 >gi|126176491|ref|YP_001052640.1| putative DNA mismatch repair protein [Shewanella baltica OS155] gi|125999696|gb|ABN63771.1| putative DNA mismatch repair protein [Shewanella baltica OS155] Length = 618 Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats. Identities = 66/474 (13%), Positives = 142/474 (29%), Gaps = 69/474 (14%) Query: 25 IAIKELIENSLDAESSRVETVIAGG---GKSFFQITDNGFGMTSEEIPMAVQRHC-TSK- 79 I ELI N D+ ++ V+ I G + + DNG G+ +E R +SK Sbjct: 31 SVI-ELIANGFDSGATSVDVTIEHNEMHGLAAISVLDNGSGIDIKECDQHFSRFNESSKQ 89 Query: 80 ISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNT----------GAQIAISGEKIS 129 DD H G L S+ T ++ + + K Sbjct: 90 GDDDLQGAHGKGR----LAFHLLCSNATWYTKCHDSESKIFIDSLTLRNFSAKEISPKEQ 145 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 GT V + + +P K+ + I P+ T + Sbjct: 146 HAPLSLFKSGTCVVLTNFHTNLPELDVIRKNLESYFGW-------RLILNPERKLTVNG- 197 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ 249 + + ++ + G +F + + + P Sbjct: 198 ------VEVDIPESDLIKKNICINGAEFKIDFIR------------WIDKP--------- 230 Query: 250 FYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFR 309 + + R + + + P L D N + S + F Sbjct: 231 -----GDEKSYNYVVNHDGRVLHRDLSSFNKKPNFHLSSYSRSDWFD-NFDKSSSSLNFT 284 Query: 310 NPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTN--TQE 367 + + + K + K SS + ++ + F ++ + Y + +E Sbjct: 285 DTPQVSP--DSTEFKKLKKAIHDFSSDIYEEFLREFVEEKIEEYEARGYFPEHKSLKAEE 342 Query: 368 KLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLV 427 + +EN S L DPT N+ E+ L ++N I + ++ Sbjct: 343 AAWRRENTKSFVKSLYLADPTI--FNNIKEKPVKILLALIDKILVSNENDTIFEIIGEIL 400 Query: 428 IVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 +D++ + +++ +++ +L + + + ++ + E L Sbjct: 401 NLDENQINIFSR--QIKNSSLKNIVSTIEVLQKRELAVHKLREIMVKHYREVLE 452 >gi|323332495|gb|EGA73903.1| Mlh2p [Saccharomyces cerevisiae AWRI796] Length = 521 Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 114/304 (37%), Gaps = 28/304 (9%) Query: 83 DFSNIHTFGFRGEALPSIGAVSH----LTLMSRPPQNNTGAQIAISG---EKISSVRPVA 135 D S + T GFRGEAL + + + + + ++ + G + + V+ Sbjct: 6 DISILTTLGFRGEALFLLSNLCNQKGSMQVETKTADDVIGEKWLVDSKGGITNGKRYKVS 65 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKS-EQVETNLITDVIRRMAIAYPKVSFTFSTI----- 189 GT V +R L + AR + S + + + +I ++ + + F FS + Sbjct: 66 CPVGTTVTLRKLLGGLRARYLEISSRPRKTFDELIYLINHYSLIHRNIRFYFSLVSLQKN 125 Query: 190 -----KSNRYKMNFQSTNGNFPERISQVIGE-----DFINNAVELNEKSNEITLQGYTGI 239 K + ++ + + ++++ N V + + ++ L Sbjct: 126 GAIERKQMQETLDPKISRARSLSLLARLKKPVPLNFIVEENFVIDEKINLDLILPRMVPE 185 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY---PVVV-LLLEIDPRQV 295 ++ +N R + + +I P+V + L D + + Sbjct: 186 SDVINIKRRFKFLSVNERALSLNLETGKTISKLLSSIYRDFSLLDPMVWFINLNCDTKLL 245 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK-GISTSSVLSKKMISSFHQDNAPKTH 354 DVN+ P K+ + ++ +I I ++ + ++ GI T+ + K + S ++ +P Sbjct: 246 DVNIEPEKNDVMIKSFEVIFKKIENKLKLLLEERIGIETNMLGDKHVQPSINEKTSPALV 305 Query: 355 LPKY 358 +P Sbjct: 306 IPTP 309 >gi|259148024|emb|CAY81273.1| Mlh2p [Saccharomyces cerevisiae EC1118] Length = 614 Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 114/304 (37%), Gaps = 28/304 (9%) Query: 83 DFSNIHTFGFRGEALPSIGAVSH----LTLMSRPPQNNTGAQIAISG---EKISSVRPVA 135 D S + T GFRGEAL + + + + + ++ + G + + V+ Sbjct: 6 DISILTTLGFRGEALFLLSNLCNQKGSMQVETKTADDVIGEKWLVDSKGGITNGKRYKVS 65 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKS-EQVETNLITDVIRRMAIAYPKVSFTFSTI----- 189 GT V +R L + AR + S + + + +I ++ + + F FS + Sbjct: 66 CPVGTTVTLRKLLGGLRARYLEISSRPRKTFDELIYLINHYSLIHRNIRFYFSLVSLQKN 125 Query: 190 -----KSNRYKMNFQSTNGNFPERISQVIGE-----DFINNAVELNEKSNEITLQGYTGI 239 K + ++ + + ++++ N V + + ++ L Sbjct: 126 GAIERKQMQETLDPKISRARSLSLLARLKKPVPLNFIVEENFVIDEKINLDLILPRMVPE 185 Query: 240 PTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY---PVVV-LLLEIDPRQV 295 ++ +N R + + +I P+V + L D + + Sbjct: 186 SDVINIKRRFKFLSVNERALSLNLETGKTISKLLSSIYRDFSLLDPMVWFINLNCDTKLL 245 Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKK-GISTSSVLSKKMISSFHQDNAPKTH 354 DVN+ P K+ + ++ +I I ++ + ++ GI T+ + K + S ++ +P Sbjct: 246 DVNIEPEKNDVMIKSFEVIFKKIENKLKLLLEERIGIETNMLGDKHVQPSINEKTSPALV 305 Query: 355 LPKY 358 +P Sbjct: 306 IPTP 309 >gi|157867548|ref|XP_001682328.1| hypothetical protein [Leishmania major strain Friedlin] gi|68125781|emb|CAJ03640.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 1284 Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%) Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 + + + +C G+I G ++ ++ +E C+HGRP+F L Sbjct: 1226 IPSVFLDFFISRSCRGAIMFGDVLRPTAARSMVAALECVEQYYVCSHGRPSFTHLT 1281 >gi|140571|sp|P25280|YD3M_HERAU RecName: Full=Uncharacterized 68.4 kDa protein in HgiDIIM 3'region; AltName: Full=ORF68 gi|48774|emb|CAA38942.1| orf 68 [Herpetosiphon aurantiacus] Length = 611 Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats. Identities = 86/576 (14%), Positives = 179/576 (31%), Gaps = 69/576 (11%) Query: 30 LIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNI-- 87 L+ N+ DA+++ V I I DNG GM+ E+ R K D + I Sbjct: 33 LVANAWDADATEVSINIRQ---DEIVIQDNGIGMSIEDANTKFLRIGHQKREDSANTISG 89 Query: 88 -HTFGFRGE---ALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIV- 142 H G +G A+ I ++ + S G I + V + + V Sbjct: 90 RHVMGRKGIGILAIFGIANIA--EVYSCKDGVPHGFIIHKGDIERGISSDVTLYRPSSVP 147 Query: 143 -EVRDLFFTIPARLNFLKSEQVETNL--ITDVIRRMAIAYPKVSFTFSTIK--------- 190 E + L +KS TD+ RR I +F+ Sbjct: 148 QEALSIESGTKIILREIKSSIGNAEKTLRTDLARRFTIINNNCNFSVIINNTPINDNDRD 207 Query: 191 --SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT-LQGYTGIPTFNRGNA 247 + + + + + + F + + G P+ Sbjct: 208 YLNKVQFLWYLGGESSKYANFFTKLKKSFEITNLGDGMSGMTVKGWIGTVYRPSDIPNEQ 267 Query: 248 NQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAK-SYI 306 F +G+ +Q+ ++ +G + + + + N K + Sbjct: 268 PYHIYFAHGKMIQEDILIDITDAGLYRQYIIGEIEADFMDSDDEDDIITSNRQRIKQTDP 327 Query: 307 RFRNPTI-----IRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATS 361 R+ I I + K + + S +++ K + + S Sbjct: 328 RYLKLLEYVKIDIMRVIASTWTKLRKEYPSNPKKEEVNDSSLSKDSNSSEKENTNASSDS 387 Query: 362 LTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQ 421 T T E + + N ++D +++ ++ + + Sbjct: 388 STAT-ENASSDSSTATENASSETNDGEVEDNSFFDDDIPEPSPPPKQEITTAFR-----E 441 Query: 422 TTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLH 481 + + + + +I ++Q + K TS + +LEG ++ + L Sbjct: 442 MKNLVKNSNIPNQMKNIILYDIQQAAYAYKGTSFKACIVMLGAILEGVMLGTIQRTDVLE 501 Query: 482 RLGIKAERFGPNAIAIREIP---AILSKKNIPQLLRDIIDEIIDSSTT-YTLQDRIE--- 534 L IA+ ++P + L +N R ++ + I ++ + ++ IE Sbjct: 502 YL-----------IALPQVPKPLSDLGPRNPKFADRTVLAQYIGTTFSFQDCKEIIELCV 550 Query: 535 --------NILATMACYGSIRSGRKMQSIEMNRLLR 562 +IL T+ SI G + +M +L R Sbjct: 551 QGTNKLGVDILQTV--RNSIHPGSVL--KDMKQLAR 582 >gi|50119598|ref|YP_048765.1| putative DNA mismatch repair protein [Pectobacterium atrosepticum SCRI1043] gi|49610124|emb|CAG73564.1| putative DNA mismatch repair protein [Pectobacterium atrosepticum SCRI1043] Length = 663 Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 109/355 (30%), Gaps = 64/355 (18%) Query: 23 PSIAIKELIENSLDAESSRVETVIAG---GGKSFFQITDNGFGMTSEEIPMAVQRHCTS- 78 PS AI EL+ N DA +S+V+ I GG + DNG G+ ++ R S Sbjct: 28 PSQAIVELVANGFDAGASKVDVQIKRNDLGGLESVSVLDNGSGINIDKCEEHFSRFNESL 87 Query: 79 K-ISDDFSNIHTFG---FRGEALPSIGAV---------SHLTLMSRPPQNNTGAQIAISG 125 K +DD H G F L S A+ +T+ S ++ ++ Sbjct: 88 KQGNDDLQGAHGKGRLSFH---LFSKEAIWFTRYQGHDFKITINS---ESLRDFKVVELV 141 Query: 126 EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFT 185 E + GT V +R +P + + +K Q + Sbjct: 142 ESEQHASLRNLQNGTCVVLRHFIKNLPGKDSIIKKLQNNF-----------------GWR 184 Query: 186 FSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRG 245 S K+ + +N N I +E+++ + + + P Sbjct: 185 LSLNKNRKLFLNDFEINVPLNVSI---------EKNIEVDKFTFNVLFIRWISKP----- 230 Query: 246 NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD-VNVHPAKS 304 + + R + E L VD ++H + Sbjct: 231 ---------GVEKSFNYLVNKQGRIVFRELSSFNHKQNFYLSTYTRSDWVDFFDIHDSSL 281 Query: 305 YIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYA 359 I ++ + ++ I K G K+ + + K + P Y+ Sbjct: 282 NFNDEKKVSISSYEYKKLKSEIQKIGKEIYETFLKEFVDEKICEYEEKGYFPSYS 336 >gi|17548153|ref|NP_521555.1| hypothetical protein RSc3436 [Ralstonia solanacearum GMI1000] gi|17430460|emb|CAD16933.1| conserved hypothetical protein [Ralstonia solanacearum GMI1000] Length = 667 Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 17/117 (14%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEI-PMAVQRHCTSKIS 81 P+ A++ELI N+ DA+++ V I DNG GMT E + + +SK + Sbjct: 56 PASALRELISNAYDADATSVVIQTDAPRFERIIIRDNGNGMTPEVLADLVCHIGGSSKRT 115 Query: 82 DDFSNIHT---------------FGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIA 122 + + T G G L ++ ++ H ++++ +N Sbjct: 116 KKGTRLGTARIDDASRSPAGRKLIGKIGIGLFAVAQLTQHFQIITKRKGDNFRTSAV 172 >gi|291295488|ref|YP_003506886.1| histidine kinase [Meiothermus ruber DSM 1279] gi|290470447|gb|ADD27866.1| histidine kinase [Meiothermus ruber DSM 1279] Length = 473 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 21 ERPSIAIKELIENSLDAESSRVE-TVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 ER + L+ N++ A ++R+ + + ++ DNG G++ E +P +R Sbjct: 359 ERLHQVMANLVSNAIKAGATRIRLIALDLAERVVIRVEDNGEGISKEHLPHLFERFY 415 >gi|146083443|ref|XP_001464739.1| hypothetical protein [Leishmania infantum JPCM5] gi|134068833|emb|CAM59767.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 1284 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 23/56 (41%) Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 + + +C G+I G ++ ++ ++ C+HGRP+F L Sbjct: 1226 IPSVFLEFFISRSCRGAIMFGDVLRPTAARSMVSALDCVEQYYVCSHGRPSFTHLT 1281 >gi|162456783|ref|YP_001619150.1| hypothetical protein sce8500 [Sorangium cellulosum 'So ce 56'] gi|161167365|emb|CAN98670.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 600 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%) Query: 22 RPSIAIKELIENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPM-AVQRHCTSK 79 P ++EL++N +DA + ++ + G +TD+G GM+ E+I + +SK Sbjct: 31 DPYAFLRELVQNGMDAGARKIAVRVETLPGACATSVTDDGCGMSREDIEGPLLTLFSSSK 90 Query: 80 ISDDFSNIHTFG 91 D + I +G Sbjct: 91 -EGDPTKIGKYG 101 >gi|160878426|ref|YP_001557394.1| histidine kinase [Clostridium phytofermentans ISDg] gi|160427092|gb|ABX40655.1| histidine kinase [Clostridium phytofermentans ISDg] Length = 738 Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 56/149 (37%), Gaps = 16/149 (10%) Query: 20 IERPSIAIKELIENSLDAESSRVETVIAGG--GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 I P +A+ EL++NS DA++ + G S + D+G GM+ ++I T Sbjct: 26 ISNPIVAVSELVKNSYDADADNITVEFKNLVTGVSQLIVKDDGDGMSLDDIQNKWMIVGT 85 Query: 78 -SKISDDFSNIHT----FGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSV 131 +KI + N + G +G S+ +S L + + + I +K + Sbjct: 86 DNKIHN--PNTKSGRRKLGEKGIGRFSVERLSRKLKITTTEFGKDFALVFEIDWDKDEAE 143 Query: 132 RPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 V + IP N + Sbjct: 144 ADEFGI------VNHPVYKIPFERNIKGT 166 >gi|326390619|ref|ZP_08212174.1| ATP-binding region ATPase domain protein [Thermoanaerobacter ethanolicus JW 200] gi|325993297|gb|EGD51734.1| ATP-binding region ATPase domain protein [Thermoanaerobacter ethanolicus JW 200] Length = 883 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 46/260 (17%), Positives = 72/260 (27%), Gaps = 56/260 (21%) Query: 21 ERPSIAI-KELIENSLDA-ESSRV--ETVIA---GGGKSFFQITDNGFGMTSEEIPMAVQ 73 + + KEL++N+LDA ES+ + E I I+DNG G+ Sbjct: 47 TNFASVVLKELVDNALDACESNNIIPEINIDILMKNDIYLISISDNGRGIPP-------- 98 Query: 74 RHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA-------QIAISGE 126 H S+I D +I VS ++ P + G G Sbjct: 99 -HTVSRILD--FSIR--------------VSDKSIYRSPTRGAQGNALKTVLGIPFSLGC 141 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLIT-------------DVIR 173 + + TI D + + S+ VE IT + Sbjct: 142 SMPVIIEAQGTKHTIYTRVDAIGNVRIEHSKEPSQYVEGTKITVPVPSANQKFYPEWWAK 201 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP----ERISQVIGEDFINNAVELNEKSN 229 AI P S + S +F E + V D + N S Sbjct: 202 AFAIFNPHASIKIRLFDKKSVNDSACSNAKDFQNKTLEFLPTVSFPDEWIKFLPTNPTSP 261 Query: 230 EITLQGYTGIPTFNRGNANQ 249 + F + Sbjct: 262 WWYSEEDLARLIFAYVYSKN 281 >gi|221234020|ref|YP_002516456.1| hypothetical protein CCNA_01083 [Caulobacter crescentus NA1000] gi|220963192|gb|ACL94548.1| hypothetical protein CCNA_01083 [Caulobacter crescentus NA1000] Length = 663 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 58/128 (45%), Gaps = 20/128 (15%) Query: 7 SEKIINQIAAGEIIER-PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTS 65 S+++I ++ G I R P+ A++ELI N+ DA++ V + S + D+G GM+ Sbjct: 39 SDRVIARVTDG--IYRQPASALRELISNAWDADAQNVTILTDAPRFSRIYVRDDGAGMSH 96 Query: 66 EEIPMAVQR-HCTSKISDDFSNIH---------TFGFR------GEALPSIGAVS-HLTL 108 + + ++K D+ ++ T G R G L S+ ++ + Sbjct: 97 RTLARLMHNIGGSAKRRDEGQDLGLASDADPELTPGGRKIIGKIGIGLFSVSQLARRFEI 156 Query: 109 MSRPPQNN 116 +++ ++ Sbjct: 157 ITKTKGSD 164 >gi|322498152|emb|CBZ33227.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1284 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 23/56 (41%) Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 + + +C G+I G ++ ++ ++ C+HGRP+F L Sbjct: 1226 IPSVFLEFFISRSCRGAIMFGDVLRPTAARSMVAALDCVEQYYVCSHGRPSFAHLT 1281 >gi|84392319|ref|ZP_00991746.1| putative DNA mismatch repair protein [Vibrio splendidus 12B01] gi|84376439|gb|EAP93319.1| putative DNA mismatch repair protein [Vibrio splendidus 12B01] Length = 655 Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 4/65 (6%) Query: 23 PSIAIKELIENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS- 78 P AI EL+ N DA ++ ++ + G ++TD+G G+ + + + +R S Sbjct: 24 PENAIFELVWNGFDANATTIKINLTCNDMHGLECIEVTDDGDGIDVQTLQSSFERFNEST 83 Query: 79 KISDD 83 KI++D Sbjct: 84 KINND 88 >gi|302389265|ref|YP_003825086.1| histidine kinase [Thermosediminibacter oceani DSM 16646] gi|302199893|gb|ADL07463.1| histidine kinase [Thermosediminibacter oceani DSM 16646] Length = 186 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 10/61 (16%) Query: 28 KEL-------IENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCT 77 KEL +ENSL+A ++ VE I K +I DNG GM E A+ T Sbjct: 2 KELSLHVMDIVENSLNAGATVVEIKIVEDSKKDLLAIEIRDNGMGMDEETAKKALDPFFT 61 Query: 78 S 78 S Sbjct: 62 S 62 >gi|154335198|ref|XP_001563839.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134060868|emb|CAM37885.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1305 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%) Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 + N + +C G+I G ++ ++ ++ C+HGRP+F L Sbjct: 1247 IPSVFLNFFISRSCRGAIMFGDVLRPNAARSMVAALDCVEQYYVCSHGRPSFTHLT 1302 >gi|121594547|ref|YP_986443.1| DNA mismatch repair ATPase-like protein [Acidovorax sp. JS42] gi|120606627|gb|ABM42367.1| DNA mismatch repair enzyme (predicted ATPase)-like protein [Acidovorax sp. JS42] Length = 651 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 48/111 (43%), Gaps = 13/111 (11%) Query: 24 SIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 + + E + N+ DA++ V+ I G + +I D+G GM+ +++ R + +D Sbjct: 26 AAVLTEAVANAWDADAETVDIKIDSDG-NRIEILDDGIGMSVDDMNGKYLRVGYRRRDED 84 Query: 84 FSNIHT-------FGFRG---EALPSIGAVSHLTLMSRPPQNNTGAQIAIS 124 + T G +G +L SI V + + S + G ++ + Sbjct: 85 LEHGKTTAKGRPVMGRKGLGKLSLFSIANV--IEVESARDGSAHGLRMTVD 133 >gi|282877472|ref|ZP_06286293.1| histidine kinase [Prevotella buccalis ATCC 35310] gi|281300413|gb|EFA92761.1| histidine kinase [Prevotella buccalis ATCC 35310] Length = 766 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 91/617 (14%), Positives = 191/617 (30%), Gaps = 93/617 (15%) Query: 2 KIRKLSEKII----NQIA----AGEIIERPSI--------AIKELIENSLDAESSRVETV 45 KI LS ++ + I AG +I+R A+ ELI+NS DA+++ V+ Sbjct: 24 KILALSNELSKFDKDNIRFSVDAG-VIDRLGNELVARQETAVSELIKNSFDADATDVKLT 82 Query: 46 IAGG---GKSFFQITDNGFGMTSEEIPMAVQR-HCTSKIS---DDFSNIHTFGFRGEALP 98 G + I DNG GM+ E++ R T K+ + + G +G Sbjct: 83 FINSSIVGGTLI-IEDNGVGMSIEQLINGFMRISSTDKVRNPYSELYHRKRAGQKG---- 137 Query: 99 SIGAVS------HLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTI--VEVRDLFF- 149 IG + LT++++ + + I + + + I +E + Sbjct: 138 -IGRFAVQRLGRKLTIITKTHNLEEASCLTIDWDNYVGDKNLTDITNPIKKIECDGVSGT 196 Query: 150 TIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERI 209 + K + I + + +P S +K F ++GN +I Sbjct: 197 KLIIDKLRDKWTEAAIKRIYRYVSDIMQPFPLSLSRQSNNIDPGFKTYFFVSDGNGDRKI 256 Query: 210 SQ--VIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILST 267 ++ D ++ N + D + Sbjct: 257 VDEKIMIYDHAVAIIDGEIDDNHFAKYSVNSDK-------------LGVHFSDDIGVDPD 303 Query: 268 IRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNF-IIQSIQKAI 326 + + I ++ + E ++++ K + Sbjct: 304 DKNTPFDQIKNVKFRAYYFIYESSLIP-KMHMNAIKRIANMSGGIRLYRNGFRVLPYGEP 362 Query: 327 NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDD 386 +S ++ I HQ+ + + S E+ +E ++ + L+ + Sbjct: 363 GDDWLSLDLSTRRRSILPVHQNLSFFGFVEINDNSGN--FEETSSREGLMNNDALMQLQN 420 Query: 387 PTYSEDNDPV--------------EESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQH 432 TY + V +E I + + + L ++ Sbjct: 421 FTYRSIVNAVIKIAEVRNKKIVSGQEKSDDGNWEKIEIRVKNIALTLEELDKALESENES 480 Query: 433 AAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGP 492 +R R+ N KI ++ L L +G+ +F Sbjct: 481 IVTKR------RRRKNINKIKRNIAAVKKLQKLELDRTFKERSMLRVLSSVGLTIGQF-- 532 Query: 493 NAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILATMACYGS-----IR 547 + EI L NI +R ++D++ + ++ A+ + Y S I Sbjct: 533 ----VHEIKYHLD--NIQDDIRTLMDDLKNEMNALNRLTILDKNFASFSTYMSYFDNVIS 586 Query: 548 SG--RKMQSIEMNRLLR 562 ++++ IEM ++R Sbjct: 587 LNIVKELKPIEMRSVVR 603 >gi|221194507|ref|ZP_03567564.1| conserved hypothetical protein [Atopobium rimae ATCC 49626] gi|221185411|gb|EEE17801.1| conserved hypothetical protein [Atopobium rimae ATCC 49626] Length = 359 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 49/127 (38%), Gaps = 12/127 (9%) Query: 26 AIKELIENSLDAESSRVETVI--AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD- 82 + E++ NS DA + + +S I D+G G+ + TSK+ Sbjct: 53 IVIEMLRNSRDAGARHIYVATTREQNTRSLI-ILDDGSGIPKDMQEKVFDARVTSKLESV 111 Query: 83 --DFSNIHTFGFRGEALPSIGAVSHLT-LMSRPPQNNTGAQIAISGEKISSVRPVAMNPG 139 D +H G RG AL SI + T + S P + ++ + EK+ + Sbjct: 112 HMDRWGVH--G-RGMALYSIRENADYTKVESSAPGLGSAIKVVVDAEKL--TERSDQSSW 166 Query: 140 TIVEVRD 146 V V D Sbjct: 167 PRVGVDD 173 >gi|222479739|ref|YP_002565976.1| DNA topoisomerase VI, B subunit [Halorubrum lacusprofundi ATCC 49239] gi|222452641|gb|ACM56906.1| DNA topoisomerase VI, B subunit [Halorubrum lacusprofundi ATCC 49239] Length = 818 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 40/188 (21%) Query: 23 PSIAIKELIENSLDAESSR-------VETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQR 74 A+KE ++N+LDA + + I G I DNG G+T E++P + Sbjct: 47 LVTAVKEAVDNALDA--TEEAGVLPDIYIEIEEVGDYYRLVIEDNGPGITKEQLPKVFGK 104 Query: 75 -------HCTSKISDDFSNIHTFGFRGEALPSIGAV--SHLT------LMSRPPQNNTGA 119 H + G +G + AV S LT + SRP + Sbjct: 105 LLYGSRFHA---------REQSRGQQGIGIS--AAVLYSQLTSGQPAKITSRPKGQSRAQ 153 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + ++ + + T D L + + L D ++ A+ Sbjct: 154 YFELIIDTDTNEPEIKADEETTW---DRPHGTRIELEMEANMRARNQLH-DYVKHTAVVN 209 Query: 180 PKVSFTFS 187 P F Sbjct: 210 PHARFELR 217 >gi|149918441|ref|ZP_01906931.1| putative DNA mismatch repair protein [Plesiocystis pacifica SIR-1] gi|149820741|gb|EDM80151.1| putative DNA mismatch repair protein [Plesiocystis pacifica SIR-1] Length = 423 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 22 RPSIAIKELIENSLDAESSRVETVIAG---GGKSFFQITDNGFGMTSEEIPMAVQR 74 RP AI+ELI NSLDA+++RVE GG + D+G G T + +R Sbjct: 34 RPLQAIQELIWNSLDADATRVEVAFDKNLFGGIERVSVIDDGEGFTPQRAFEVFER 89 >gi|318058422|ref|ZP_07977145.1| histidine kinase [Streptomyces sp. SA3_actG] Length = 670 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Query: 23 PSIAIKELIENSLDAESSRVETVIAG---GGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 P A++ELI NSLDA++ V ++ GG + D+G G+ +E+ ++ TS Sbjct: 22 PVGAVEELIWNSLDADAENVTVLLERNDIGGVDRVAVIDDGTGIPAEKCAERFEQIGTS 80 >gi|302521754|ref|ZP_07274096.1| conserved hypothetical protein [Streptomyces sp. SPB78] gi|302430649|gb|EFL02465.1| conserved hypothetical protein [Streptomyces sp. SPB78] Length = 670 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Query: 23 PSIAIKELIENSLDAESSRVETVIAG---GGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 P A++ELI NSLDA++ V ++ GG + D+G G+ +E+ ++ TS Sbjct: 22 PVGAVEELIWNSLDADAENVTVLLERNDIGGVDRVAVIDDGTGIPAEKCAERFEQIGTS 80 >gi|170739773|ref|YP_001768428.1| histidine kinase [Methylobacterium sp. 4-46] gi|168194047|gb|ACA15994.1| histidine kinase [Methylobacterium sp. 4-46] Length = 774 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 EL++NS DA ++ V+ K + DNG GM+ ++ Sbjct: 30 ELVKNSFDAGATSVDIEFDPN-KRSIAVVDNGRGMSESDVR 69 >gi|254557685|ref|YP_003064102.1| hypothetical protein JDM1_2519 [Lactobacillus plantarum JDM1] gi|254046612|gb|ACT63405.1| hypothetical protein JDM1_2519 [Lactobacillus plantarum JDM1] Length = 572 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 14/116 (12%) Query: 12 NQIAA-GEIIERPSIAIKELIENSLDAESSR----------VETVIAGGGKSFFQITDNG 60 QI + E + EL++N++DA + R + I +++D+G Sbjct: 22 QQIRSTHESYHNDYDVLAELVQNAVDAVAQRKREDSGYSAHIAICIDE-RHRLIEVSDDG 80 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALP-SIGAVSHLTLMSRPPQN 115 GM+ +E+ +V+ + +SK +++ I T G +G L SI + + + + Sbjct: 81 VGMSKDELNRSVRLNESSKRNNEIDKI-TIGEKGIGLSFSIFESNRVLIQTNNDSE 135 >gi|16125283|ref|NP_419847.1| hypothetical protein CC_1031 [Caulobacter crescentus CB15] gi|13422325|gb|AAK23015.1| hypothetical protein CC_1031 [Caulobacter crescentus CB15] Length = 618 Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 17/111 (15%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-HCTSKIS 81 P+ A++ELI N+ DA++ V + S + D+G GM+ + + ++K Sbjct: 9 PASALRELISNAWDADAQNVTILTDAPRFSRIYVRDDGAGMSHRTLARLMHNIGGSAKRR 68 Query: 82 DDFSNIH---------TFGFR------GEALPSIGAVS-HLTLMSRPPQNN 116 D+ ++ T G R G L S+ ++ ++++ ++ Sbjct: 69 DEGQDLGLASDADPELTPGGRKIIGKIGIGLFSVSQLARRFEIITKTKGSD 119 >gi|294084867|ref|YP_003551627.1| hypothetical protein SAR116_1300 [Candidatus Puniceispirillum marinum IMCC1322] gi|292664442|gb|ADE39543.1| hypothetical protein SAR116_1300 [Candidatus Puniceispirillum marinum IMCC1322] Length = 489 Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%) Query: 22 RPSIAIKELIENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 + A+ +LI+NS+ A +++V + G SF +I D+G GM+ +E+ A++ SK Sbjct: 25 DLAAALADLIDNSITAGATKVSIDCSYDGDVSFIRIADDGQGMSEDELKNAMRPA--SKN 82 Query: 81 SDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAIS 124 + + G G L S +LT++S+ A + Sbjct: 83 PLEDRSPDDLGRFGLGLKTASFSQARNLTVISKKDGKVFAANWDLD 128 >gi|322490169|emb|CBZ25430.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1290 Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 25/56 (44%) Query: 529 LQDRIENILATMACYGSIRSGRKMQSIEMNRLLREMEKNPNSSQCNHGRPTFIKLK 584 + + + +C G+I G ++ ++ ++ C+HGRP+F +L Sbjct: 1232 IPSVFLDFFISRSCRGAIMFGDVLRPTAARTMVAALDCVEQYYVCSHGRPSFTQLT 1287 >gi|189423363|ref|YP_001950540.1| hypothetical protein Glov_0291 [Geobacter lovleyi SZ] gi|189419622|gb|ACD94020.1| conserved hypothetical protein [Geobacter lovleyi SZ] Length = 538 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 13/116 (11%) Query: 31 IENSLDAESSRVETVI--AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIH 88 I+NS+ A++ +E + GG +TD+G GM + + A R+ SK D +++ Sbjct: 40 IDNSIAAQAKNIEVTVAMDFGGNILVSVTDDGCGMDRDGLINA-MRYG-SKRRADQASLG 97 Query: 89 TFGFRGEAL----PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGT 140 FG L S L+++SR + + + I++V + G+ Sbjct: 98 KFG-----LGLKTASTAFCRRLSVISRSQAGSDVLKATWDLDHIAAVGRWELKLGS 148 >gi|255521306|ref|ZP_05388543.1| hypothetical protein LmonocFSL_08790 [Listeria monocytogenes FSL J1-175] Length = 483 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 49/132 (37%), Gaps = 14/132 (10%) Query: 6 LSEKIINQIAAGEII-----ERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 L N I + + + + +NS+ A ++R++ K + I DNG Sbjct: 7 LVPDASNLIESQRSVGYTFETAIADVV----DNSVSAFATRIDINFDNL-KKYVTILDNG 61 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTG 118 GM+ E+ A++ SK D G G L S LT++S +G Sbjct: 62 HGMSKSELLQAMK--YGSKSIFDLRTQEDLGRFGLGLKMASFSQCRKLTVVSIKEDELSG 119 Query: 119 AQIAISGEKISS 130 A + K + Sbjct: 120 AIWDLDIVKKKN 131 >gi|293596305|ref|ZP_05230327.2| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] gi|293594569|gb|EFG02330.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194] Length = 484 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 49/132 (37%), Gaps = 14/132 (10%) Query: 6 LSEKIINQIAAGEII-----ERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 L N I + + + + +NS+ A ++R++ K + I DNG Sbjct: 8 LVPDASNLIESQRSVGYTFETAIADVV----DNSVSAFATRIDINFDNL-KKYVTILDNG 62 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTG 118 GM+ E+ A++ SK D G G L S LT++S +G Sbjct: 63 HGMSKSELLQAMK--YGSKSIFDLRTQEDLGRFGLGLKMASFSQCRKLTVVSIKEDELSG 120 Query: 119 AQIAISGEKISS 130 A + K + Sbjct: 121 AIWDLDIVKKKN 132 >gi|284989343|ref|YP_003407897.1| hypothetical protein Gobs_0757 [Geodermatophilus obscurus DSM 43160] gi|284062588|gb|ADB73526.1| conserved hypothetical protein [Geodermatophilus obscurus DSM 43160] Length = 436 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Query: 25 IAIKELIENSLDAESSRVETVIAGGGKS-FFQITDNGFGMTSE 66 A+ +L++NS+ A ++R+E VI G I D+G GMT+ Sbjct: 29 SAVADLVDNSVTAGATRIEIVIEYAGADSLIMIADDGCGMTAN 71 >gi|162149540|ref|YP_001604001.1| hypothetical protein GDI_3778 [Gluconacetobacter diazotrophicus PAl 5] gi|209544780|ref|YP_002277009.1| histidine kinase [Gluconacetobacter diazotrophicus PAl 5] gi|161788117|emb|CAP57721.1| unknown protein [Gluconacetobacter diazotrophicus PAl 5] gi|209532457|gb|ACI52394.1| histidine kinase [Gluconacetobacter diazotrophicus PAl 5] Length = 771 Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 EL++NS DA ++RV+ G++ I D+G GMTS +I Sbjct: 31 ELVKNSFDAGATRVDIEF-DPGEASITIVDDGKGMTSTDIR 70 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 8/56 (14%) Query: 30 LIENSLD----AESSRVETVIAGGGKS--FFQITDNGFGMTSE--EIPMAVQRHCT 77 L++N LD A++S++E G+ ++ D+G G+ + +R T Sbjct: 672 LVDNLLDNARKAKASKIEFKATRKGQDSVLIRVIDDGLGIDRRKVDPSKIFERGYT 727 >gi|308233955|ref|ZP_07664692.1| ATP-binding region ATPase domain protein [Atopobium vaginae DSM 15829] gi|328944035|ref|ZP_08241500.1| hypothetical protein HMPREF0091_10725 [Atopobium vaginae DSM 15829] gi|327492004|gb|EGF23778.1| hypothetical protein HMPREF0091_10725 [Atopobium vaginae DSM 15829] Length = 376 Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 7/79 (8%) Query: 26 AIKELIENSLDAESSRVET-VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI---S 81 + EL+ NS DA + + + D+G G+ + TSK+ Sbjct: 54 IVIELLRNSRDAGAHHIFVATTKQDTIRTITVLDDGVGIPQSMHDKIFEARVTSKLDSVH 113 Query: 82 DDFSNIHTFGFRGEALPSI 100 D IH G RG AL +I Sbjct: 114 SDHWGIH--G-RGMALYAI 129 >gi|169836749|ref|ZP_02869937.1| DNA mismatch repair protein mutL [candidate division TM7 single-cell isolate TM7a] Length = 121 Score = 60.8 bits (146), Expect = 6e-07, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 12/132 (9%) Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI 231 + + A++ V+F+ + K ++ I ++ G+ + N + Sbjct: 1 MLKEALSNSNVAFSLELDGKSTIK----TSGKGIENTILELFGKSVLRNLKKFEY----- 51 Query: 232 TLQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEID 291 GY G R + + + F+N R V+ I + Y + G+YP ++ D Sbjct: 52 ---GYLGNVEILRSSKDFMFTFVNNRYVKSATIERAVIDGYYTKLMKGKYPFAIIFYNAD 108 Query: 292 PRQVDVNVHPAK 303 P+++DVNVHP+K Sbjct: 109 PKEIDVNVHPSK 120 >gi|147919343|ref|YP_686921.1| hypothetical protein RCIX2531 [uncultured methanogenic archaeon RC-I] gi|110622317|emb|CAJ37595.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 519 Score = 60.8 bits (146), Expect = 7e-07, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 5/114 (4%) Query: 22 RPSIAIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 AI ++I+NS+ A + V V G S I D+G GMT E+ A++ S Sbjct: 44 DLQTAIADIIDNSISAGARNVYIVFNWDGANSTISIKDDGCGMTESELIKAMRLGSIS-- 101 Query: 81 SDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVR 132 D N G G L S T+ S+ N + I + Sbjct: 102 PSDCRNPKDLGRFGLGLKTASFSQCRKFTVASKFENNPIAIRCWDIDYIIKTHD 155 >gi|262364458|gb|ACY61015.1| DNA mismatch repair protein [Yersinia pestis D182038] Length = 258 Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 84/243 (34%), Gaps = 19/243 (7%) Query: 335 SVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDND 394 S ++ ++ +D+ + + L + + S + Sbjct: 6 SSARERAAPAYKEDHPYQKQQGELYRQLLQPSAAAKPATSPAAIPASSVSSPSIPVQRIT 65 Query: 395 PVEESEATHYQ-LGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKIT 453 EE G Y + + G+ ++ A ER + ++ + + Sbjct: 66 QAEEPLHGDNYSFGRVLTVFPPCYALIEYQGGVALLSL-AVAERWL-KQAQLSPPEEGLR 123 Query: 454 SQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLL 513 Q LL P I L + E A H++ L +GI+ A +R + L ++N+ +L+ Sbjct: 124 PQPLLIPLKITLDKNEIAACQNHEKLLITMGIELSVEQGRA-TLRAVSLPLRQQNLQKLI 182 Query: 514 RDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSGRKMQSIEMNRLLREMEKNPNSS 571 +++ + + LAT +A + GS + +LL E+E+ Sbjct: 183 PELLGYLSQHEEISP------DTLATWLARHLGS--EHEVWNVSQAIQLLTEVERL---- 230 Query: 572 QCN 574 C Sbjct: 231 -CP 232 >gi|289422802|ref|ZP_06424639.1| conserved hypothetical protein [Peptostreptococcus anaerobius 653-L] gi|289156801|gb|EFD05429.1| conserved hypothetical protein [Peptostreptococcus anaerobius 653-L] Length = 488 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 5/128 (3%) Query: 1 MKIRKLSEKIINQIAAGEII-ERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 MK + L I + I A+ ++I+NS+ A + V+ ++ I DN Sbjct: 1 MKTKSLPPYAPTLIESTRAIGYSLEAAVADIIDNSIAANAKNVDIYFFPIDGAYIAILDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNT 117 G GM EEI +A+Q SK + + G G L S+ +T++S+ N Sbjct: 61 GKGMAEEEIDIAMQ--YGSKNPTEERDKKDLGRFGLGLKTASLSQCRCMTVISKQGDNLE 118 Query: 118 GAQIAISG 125 G Q I Sbjct: 119 GRQWDIDH 126 >gi|297159202|gb|ADI08914.1| ATPase [Streptomyces bingchenggensis BCW-1] Length = 491 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 27/153 (17%) Query: 14 IAAGE---IIERPSI-------AIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFG 62 IAA E ++ S A+ +L++NS+ AE+ ++ G+ + D+G G Sbjct: 5 IAAPEPAGMVASLSSLGYSLPAAVADLVDNSIAAEARHIDVEFTWAGRDSWIAVVDDGRG 64 Query: 63 MTSEEIPMA---VQRH-CTSKISDDFSNIHTFGFRGEALPSIGAVS---HLTLMSRPPQN 115 M ++E+ A R TS+ S D G G L S + S L++ + + Sbjct: 65 MNAQELVTAMTVAARGPATSRSSTDL------GRFGVGLKS-ASFSQSRQLSVATAT--D 115 Query: 116 NTGAQIAISGEKISSVRPVAMNPGTIVEVRDLF 148 + + + G V+ + Sbjct: 116 GVWHVRTWDLDVVEESGEWRLLHGADVDTTTVL 148 >gi|302544261|ref|ZP_07296603.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302461879|gb|EFL24972.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length = 485 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 9/98 (9%) Query: 22 RPSIAIKELIENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 S A+ EL++NS+ A + +V I G Q+ DNG GMT I ++ +S Sbjct: 28 SLSTALAELVDNSIQAAADQVAITITRAKAGDDPEIQVEDNGEGMTRSGIEACLRFGGSS 87 Query: 79 KISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQ 114 + +FG G L S+ H+ + S Sbjct: 88 RF----DGRRSFGRFGMGLPAASLSQARHIEVTSWQNG 121 >gi|93007192|ref|YP_581629.1| hypothetical protein Pcryo_2368 [Psychrobacter cryohalolentis K5] gi|92394870|gb|ABE76145.1| conserved hypothetical protein [Psychrobacter cryohalolentis K5] Length = 486 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 4/103 (3%) Query: 31 IENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTF 90 I+NS+ A +S V + I DNG GM+ +E+ A+ S + + + Sbjct: 33 IDNSITAGASEVHITFETDPVTKVAILDNGDGMSRDELIKAMTIGSKSPLIE--RSTKDL 90 Query: 91 GFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSV 131 G G L S LT+++R + S+ Sbjct: 91 GRFGLGLKTASFSQCKRLTVVTRQFDQTWAMCWDLDQVTKSNC 133 >gi|26990693|ref|NP_746118.1| hypothetical protein PP_3988 [Pseudomonas putida KT2440] gi|24985685|gb|AAN69582.1|AE016592_1 hypothetical protein PP_3988 [Pseudomonas putida KT2440] Length = 682 Score = 60.5 bits (145), Expect = 8e-07, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 26/131 (19%) Query: 7 SEKIINQIAAGEIIER-PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTS 65 E++ +I G I R P+ A++ELI N DA+++ V S + DNG G+T Sbjct: 39 DERVFARITDG--IYRDPASALRELIANGYDADATEVRVETDFPRFSKISVRDNGRGLTK 96 Query: 66 EEIPMA-------------VQRHCTSKISDDFSNIHTFGFR------GEALPSIGAVS-H 105 E + Q H +IS + + R G L S+ ++ H Sbjct: 97 ETLAHVICHIGGSLKRTKQGQAH---QISSEEDASRSKAGRPLIGKLGIGLFSVSQITHH 153 Query: 106 LTLMSRPPQNN 116 + ++S+ +N Sbjct: 154 VVIISKVKGSN 164 >gi|307719868|ref|YP_003875400.1| nitrogen regulation protein NtrY [Spirochaeta thermophila DSM 6192] gi|306533593|gb|ADN03127.1| nitrogen regulation protein NtrY [Spirochaeta thermophila DSM 6192] Length = 584 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 12/81 (14%) Query: 7 SEKIINQIAAGEIIERPSIAIKELIENSLDAES---SRVETVI---AGGGKSF--FQITD 58 E I+ I A E E A+ LI+N++DA + + + + G+S+ +I D Sbjct: 466 PEDIV--IQADE--EHLKQALSNLIQNAIDAGAGKEQTITVRLLRTSRDGRSYATIEIRD 521 Query: 59 NGFGMTSEEIPMAVQRHCTSK 79 G G+ ++ + + T+K Sbjct: 522 EGHGIPEDQQRLVFLPYYTTK 542 >gi|157691442|ref|YP_001485904.1| ATP-binding protein [Bacillus pumilus SAFR-032] gi|157680200|gb|ABV61344.1| possible ATP-binding protein [Bacillus pumilus SAFR-032] Length = 496 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Query: 31 IENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 ++NS+DA++S ++ I KS+ +I DNGFGM +E+ +A++ T Sbjct: 35 VDNSIDAKASEIKIDIAWDSDKSYVRIEDNGFGMNEDELVLAMKVGST 82 >gi|170291064|ref|YP_001737880.1| DNA topoisomerase VI subunit B [Candidatus Korarchaeum cryptofilum OPF8] gi|170175144|gb|ACB08197.1| DNA topoisomerase VI, B subunit [Candidatus Korarchaeum cryptofilum OPF8] Length = 512 Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 31/90 (34%) Query: 24 SIAIKELIENSLDAESSRVETVIAGGGKS---------------------FFQITDNGFG 62 I+EL+ENSLDA + G+S ++ DNG G Sbjct: 33 YTIIRELVENSLDA--------VELAGRSPKVLIVMREEREGGEESLPWYRIRVADNGIG 84 Query: 63 MTSEEIPMAVQR-HCTSKISDDFSNIHTFG 91 M EEIP+A R +SK + TFG Sbjct: 85 MDPEEIPLAFGRVFVSSKYR-LIQSRGTFG 113 >gi|317401188|gb|EFV81834.1| hypothetical protein HMPREF0005_01194 [Achromobacter xylosoxidans C54] Length = 472 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 74/207 (35%), Gaps = 39/207 (18%) Query: 24 SIAIKELIENSLDAESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHC-----T 77 + A+ +LI+NS++A ++ V + G+ + I DNG GM++ ++ A++ T Sbjct: 27 AAAVADLIDNSIEARANTVRLDVEWNGEDSYVMIADNGVGMSASQLREALRFGAERDYDT 86 Query: 78 SKISDDF----SNIHTFGFRGEALPSIGAVSHLTLMSRPPQN---------NTGAQIAIS 124 +D + T S+ LT+ SR + + G A + Sbjct: 87 ----EDLGKFGLGLKT--------ASLSQCLRLTVASRQNEGRADINAYCWDLGHIEATN 134 Query: 125 GEKISSVRPV-------AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 +I V+ + T V ++ + L + + + + R Sbjct: 135 RWEILPVKSIDLQPQARQHLKETTGTVV-IWERLDRILGYKRPDGEMARKQLTAMCRALE 193 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGN 204 + + F + R K NGN Sbjct: 194 EHVAMVFHRFLEGAVRGKRLAIYLNGN 220 >gi|284165558|ref|YP_003403837.1| DNA topoisomerase VI, B subunit [Haloterrigena turkmenica DSM 5511] gi|284015213|gb|ADB61164.1| DNA topoisomerase VI, B subunit [Haloterrigena turkmenica DSM 5511] Length = 825 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 65/224 (29%), Gaps = 59/224 (26%) Query: 23 PSIAIKELIENSLDAESSR------VETVIAGGG--KSFFQITDNGFGMTSEEIPMAVQR 74 A+KE ++N+LDA + + I G + DNG G+T E +P + Sbjct: 47 LVTAVKEAVDNALDA-AEESGILPDIYVEIEEAGDYYRLI-VEDNGPGITKESLPKVFGK 104 Query: 75 -------HCTSKISDDFSNIHTFGFRGEALPSIGAV--SHLT------LMSRPPQNNTG- 118 H + G +G + AV S LT + SR ++ Sbjct: 105 LLYGSRFHA---------REQSRGQQGIGIS--AAVLYSQLTSGKPAKITSRTQGSSEAE 153 Query: 119 -------AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 + GT +E+ + + AR D Sbjct: 154 YFELIVDTDSNEPEISVEETTSWDRPHGTRIELE-MEANMRARQQLH-----------DY 201 Query: 172 IRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGE 215 I+ A+ P + F+ PE ++ Sbjct: 202 IKHTAVVNPHARLELR---EPQEHFKFERATDQLPEETEEIRPH 242 >gi|158339670|ref|YP_001520677.1| sensor histidine kinase, putative [Acaryochloris marina MBIC11017] gi|158309911|gb|ABW31527.1| sensor histidine kinase, putative [Acaryochloris marina MBIC11017] Length = 723 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 13/127 (10%) Query: 16 AGEIIERPSIAIKELIENSLDAESSRVETVIAGG---GKSFFQITDNGFGMTSEEIPMAV 72 + EI+ A+ EL++N+ DA+++ V GK +I DNG GM+ + I + Sbjct: 31 SSEIV-----AVIELVKNAYDADATIVLVKFIEPLETGKGSIEIIDNGNGMSLKIIEKSW 85 Query: 73 QRHCT-SKISDDFSNI---HTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEK 127 T SK + FS I G +G + +S L +++R +++ + ++ Sbjct: 86 MEPATFSKKNTKFSKIYRRRFLGEKGVGRFATSKLSDFLEIVTRYIESDNEIRAIFDWKQ 145 Query: 128 ISSVRPV 134 Sbjct: 146 FDDEEKY 152 >gi|224368762|ref|YP_002602923.1| sensory signal transduction histidine kinase (ATPase domain protein) [Desulfobacterium autotrophicum HRM2] gi|223691478|gb|ACN14761.1| sensory signal transduction histidine kinase (ATPase domain protein) [Desulfobacterium autotrophicum HRM2] Length = 177 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 30 LIENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCTS 78 L+ENS+ A +++++ I +TDNG G+ + + TS Sbjct: 11 LVENSIQAGATQIDIKIDETHLHTHIKITVTDNGKGIDPAMLAVISDPFVTS 62 >gi|149918289|ref|ZP_01906780.1| hypothetical protein PPSIR1_36277 [Plesiocystis pacifica SIR-1] gi|149820815|gb|EDM80224.1| hypothetical protein PPSIR1_36277 [Plesiocystis pacifica SIR-1] Length = 1053 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 13/127 (10%) Query: 27 IKELIENSLDAESSRVETVIAGGG-KSFFQITDNGFGMTSEEIPM-AVQRHCTSKISDDF 84 ++EL++N+ DA ++RV+ + G ++ + D+G GM+ + +SK S Sbjct: 28 VRELLQNARDAGATRVDFTVEEGEDRTRVRCRDDGEGMSEGHARRYLFSLYASSKESSS- 86 Query: 85 SNIHTF--GFRGEALPSIGAV--SHLTLMSRPPQNNTGAQIAISGE-KISSVRPVAMNPG 139 + + F GF SI + + S P G +I + G+ + + V M PG Sbjct: 87 NQVGRFGVGF-----WSILRFEPKRIVIRSCPRAGGPGWEITLDGDLRDGAQARVDMGPG 141 Query: 140 TIVEVRD 146 T + + Sbjct: 142 TEIILER 148 >gi|327438859|dbj|BAK15224.1| DNA mismatch repair enzyme [Solibacillus silvestris StLB046] Length = 498 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 73/197 (37%), Gaps = 28/197 (14%) Query: 22 RPSIAIKELIENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 AI ++++NS+DA +VE + G S+ +I D+G GM ++ A++ S Sbjct: 26 DLETAIADIVDNSIDAGCKQVEIKMSWNEDG--SYIRIEDDGSGMDENQLKKAMKLG--S 81 Query: 79 KISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSV----- 131 K + + G G L S LT++++ + + + + Sbjct: 82 KNPQNIRDKRELGRFGMGLKTASFSLGKRLTVLTKKTGEKSVRCWDLEYIENENEWEIFL 141 Query: 132 -----------RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 ++ GT+V + + + A LK ++ N I V + + + Sbjct: 142 EPRDIMSSKRLGTISSETGTVVLIEN-LDRVVASSFTLKKQKSFFNKIARVRNHLGMVF- 199 Query: 181 KVSFTFSTIKSNRYKMN 197 + S K +N Sbjct: 200 -HRYLSSIDKKLVIVLN 215 >gi|307719058|ref|YP_003874590.1| histidine kinase [Spirochaeta thermophila DSM 6192] gi|306532783|gb|ADN02317.1| histidine kinase [Spirochaeta thermophila DSM 6192] Length = 207 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 27 IKELIENSLDAESSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 I EL++N+L+A + +E + G G ++ D+G GMT EE A+ T Sbjct: 9 ILELVQNALEAGARTIEVSLHTGEGWCTVEVRDDGKGMTPEEKERALDPFFT 60 >gi|73539982|ref|YP_294502.1| sensor histidine kinase [Ralstonia eutropha JMP134] gi|72117395|gb|AAZ59658.1| ATP-binding region, ATPase-like:Histidine kinase A, N-terminal [Ralstonia eutropha JMP134] Length = 659 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 7/57 (12%) Query: 30 LIENSLDAESS------RVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI N+LDA +S R++ ++ Q+ DNG G++ E++P + T+K Sbjct: 548 LIGNALDAIASAAPAQGRIDVSVSADASAVTIQVRDNGTGISPEDLPRLFEPFFTTK 604 >gi|296501659|ref|YP_003663359.1| type II restriction-modification system methylation subunit [Bacillus thuringiensis BMB171] gi|296322711|gb|ADH05639.1| Type II restriction-modification system methylation subunit [Bacillus thuringiensis BMB171] Length = 494 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 5/87 (5%) Query: 31 IENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHT 89 ++NS+DA+++ V G + +I DNG GMT EE+ A+ SK D Sbjct: 32 VDNSIDAKATYVHLEFEYDMGNGYIRIEDNGIGMTDEELQKAMTIG--SKDPRDKRGKEE 89 Query: 90 FGFRGEAL--PSIGAVSHLTLMSRPPQ 114 G G L S L ++++ Sbjct: 90 LGRFGMGLKTASFSLGKRLCIITKKDG 116 >gi|152989479|ref|YP_001347880.1| putative prophage encoded two-component system histidine kinase [Pseudomonas aeruginosa PA7] gi|150964637|gb|ABR86662.1| putative prophage encoded two-component system histidine kinase [Pseudomonas aeruginosa PA7] Length = 774 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEI 68 EL++NS DA +++V+ + I DNG GM+ ++I Sbjct: 30 ELVKNSFDAGATKVDIEF-DPEEQQIAIIDNGHGMSRDDI 68 Score = 37.7 bits (86), Expect = 5.2, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 14/74 (18%) Query: 16 AGEIIERPSI----AIKELIENSLD----AESSRVETVIAGGGKS--FFQITDNGFGMTS 65 +GE + R A+ L++N LD A++S++E + KS ++D+G G+ Sbjct: 660 SGESLIRDFSPVDIAV--LVDNLLDNARKAKASKLEFKVIKKTKSHIKIHVSDDGLGIDE 717 Query: 66 E--EIPMAVQRHCT 77 + +R T Sbjct: 718 RKVDPSKIFERGYT 731 >gi|229183238|ref|ZP_04310468.1| hypothetical protein bcere0004_8150 [Bacillus cereus BGSC 6E1] gi|228600377|gb|EEK57967.1| hypothetical protein bcere0004_8150 [Bacillus cereus BGSC 6E1] Length = 497 Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 5/87 (5%) Query: 31 IENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHT 89 ++NS+DA+++ V G + +I DNG GMT EE+ A+ SK D Sbjct: 35 VDNSIDAKATYVHLEFEYDMGNGYIRIEDNGIGMTDEELQKAMTIG--SKDPRDKRGKEE 92 Query: 90 FGFRGEAL--PSIGAVSHLTLMSRPPQ 114 G G L S L ++++ Sbjct: 93 LGRFGMGLKTASFSLGKRLCIITKKDG 119 >gi|313680469|ref|YP_004058208.1| integral membrane sensor signal transduction histidine kinase [Oceanithermus profundus DSM 14977] gi|313153184|gb|ADR37035.1| integral membrane sensor signal transduction histidine kinase [Oceanithermus profundus DSM 14977] Length = 478 Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHC 76 ER LI N++ A ++R+ + G+ Q++DNG G+ E +P +R Sbjct: 364 ERLHQVFANLIANAVKAGATRITLRVRRPPGRVIVQVSDNGPGIPPEHLPHLFERFY 420 >gi|295830061|gb|ADG38699.1| AT4G02460-like protein [Capsella grandiflora] Length = 199 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 69/161 (42%), Gaps = 6/161 (3%) Query: 203 GNFPERISQVIGEDFINNAVELNEKS-NEITLQGYTGIPTFN--RGNANQFYVFINGRTV 259 G+ + I V G + ++ ++ ++G+ P R A++ Y FINGR V Sbjct: 2 GSLKDNIITVFGXSTFTSLQPVSISISDDCRVEGFLSKPGQGTGRNLADRQYFFINGRPV 61 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 + + Y +T +YPV +L + D+NV P K + F + T + + Sbjct: 62 DMPKVSKLVNELYKDT-SSRKYPVAILDFIVPGGACDLNVTPDKRKVFFADETSVIGSLR 120 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 Z + + + S ++++ +S D A + L + ++ Sbjct: 121 ZGLNEIYSSSN--ASYIVNRFEENSEQPDKAGVSSLQEKSS 159 >gi|115524182|ref|YP_781093.1| hypothetical protein RPE_2169 [Rhodopseudomonas palustris BisA53] gi|115518129|gb|ABJ06113.1| hypothetical protein RPE_2169 [Rhodopseudomonas palustris BisA53] Length = 642 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 58/157 (36%), Gaps = 24/157 (15%) Query: 24 SIAIKELIENSLDAESSRVETVIAGG--------GKSFFQIT--DNGFGMTSEEIPMAVQ 73 S A +E+I+N+++A++SR++ G++ + DNG GM+ + + A+ Sbjct: 49 SSAAREIIDNAIEAKASRIDVFFDQAKREKGKKDGEAVSSVAFLDNGSGMSPKMVRYALS 108 Query: 74 RHC-TSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISS 130 T D+ I FGF L SI + + ++ + + + + + Sbjct: 109 WGAGTH--FDEMGTIGKFGF---GLPNASINQTRRVEVYTKRRGDEVVTKAWLDINNVQA 163 Query: 131 VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNL 167 + + D +LK + Sbjct: 164 HGLTRIEEPETAVLPDFV------RRYLKDNNLTFEH 194 >gi|254198357|ref|ZP_04904779.1| hypothetical protein BURPSS13_P1283 [Burkholderia pseudomallei S13] gi|169655098|gb|EDS87791.1| hypothetical protein BURPSS13_P1283 [Burkholderia pseudomallei S13] Length = 589 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 11/71 (15%) Query: 26 AIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDF 84 A+KELI+N+ DA++ RV V+ A I D+G GMT EE+ RH S I+ D Sbjct: 28 ALKELIDNAWDADAERVSIVLPAPLSGDSIVIEDDGTGMTEEELR----RHYLS-IATDR 82 Query: 85 SNIHTFGFRGE 95 + RGE Sbjct: 83 RS-----RRGE 88 >gi|305662508|ref|YP_003858796.1| DNA topoisomerase VI, B subunit [Ignisphaera aggregans DSM 17230] gi|304377077|gb|ADM26916.1| DNA topoisomerase VI, B subunit [Ignisphaera aggregans DSM 17230] Length = 528 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 9/59 (15%) Query: 23 PSIAIKELIENSLDA-ESS----RVETVIAGGGKS----FFQITDNGFGMTSEEIPMAV 72 A++EL+EN+LDA ++ +E I + DNG G+ + IP A Sbjct: 33 LYQAVRELVENALDATDAHGILPNIEVSIERDSVKQYVYRISVKDNGIGIPEKYIPEAF 91 >gi|300711733|ref|YP_003737547.1| DNA topoisomerase VI subunit B [Halalkalicoccus jeotgali B3] gi|299125416|gb|ADJ15755.1| DNA topoisomerase VI subunit B [Halalkalicoccus jeotgali B3] Length = 789 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 60/188 (31%), Gaps = 40/188 (21%) Query: 23 PSIAIKELIENSLDAESSR-------VETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQR 74 A+KE ++N+LDA + + I G + DNG G+T E+IP + Sbjct: 47 LVTAVKEAVDNALDA--TEEAGILPDIYVEIEEVGNYYRLVVEDNGPGITREQIPKVFGK 104 Query: 75 -------HCTSKISDDFSNIHTFGFRGEALPSIGAV--SHLT------LMSRPPQNNTGA 119 H + G +G + AV S LT + SR + Sbjct: 105 LLYGSRFHA---------REQSRGQQGIGIS--AAVLYSQLTSGKPAKITSRTQGADEAQ 153 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + ++ ++ T D L + + L D I+ A+ Sbjct: 154 YFELIIDTDTNEPEISSAETTSW---DRPHGTRIELEMEANMRARGQL-RDYIKHTAVVN 209 Query: 180 PKVSFTFS 187 P Sbjct: 210 PHARIELH 217 >gi|315187284|gb|EFU21040.1| integral membrane sensor signal transduction histidine kinase [Spirochaeta thermophila DSM 6578] Length = 584 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 12/81 (14%) Query: 7 SEKIINQIAAGEIIERPSIAIKELIENSLDAES---SRVETVI---AGGGKSF--FQITD 58 E I+ I A E E A+ LI+N++DA + + + + G+S+ +I D Sbjct: 466 PEDIV--IQADE--EHLKQALGNLIQNAIDAGAGKEQTITVRLLRTSRDGRSYATIEIRD 521 Query: 59 NGFGMTSEEIPMAVQRHCTSK 79 G G+ ++ + + T+K Sbjct: 522 EGHGIPEDQQRLVFLPYYTTK 542 >gi|147774832|emb|CAN73445.1| hypothetical protein VITISV_016790 [Vitis vinifera] Length = 825 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%) Query: 1 MK-IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSR 41 M+ I+ L E + + + +G I+ + ++ELI NSLDA +++ Sbjct: 1 MRSIKPLPEAVHSSVRSGIILFDLTRVVEELIYNSLDAGATK 42 >gi|315446770|ref|YP_004079649.1| histidine kinase [Mycobacterium sp. Spyr1] gi|315265073|gb|ADU01815.1| histidine kinase [Mycobacterium sp. Spyr1] Length = 682 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 10/79 (12%) Query: 1 MKIRKL---SEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFF--- 54 MK +L + + A E P A+ EL+ NSLDA++ V V+ Sbjct: 1 MKTYRLEAGDDHVQKL--AHE--NDPVRAVIELVWNSLDADAHHVTVVLHRNDTDVVVGA 56 Query: 55 QITDNGFGMTSEEIPMAVQ 73 ++TD+G GM E+I + Sbjct: 57 EVTDDGHGMAPEDIATEFK 75 >gi|312200493|ref|YP_004020554.1| ATP-binding region ATPase domain protein [Frankia sp. EuI1c] gi|311231829|gb|ADP84684.1| ATP-binding region ATPase domain protein [Frankia sp. EuI1c] Length = 515 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 14/120 (11%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVI---AGGGKSFFQIT 57 M+ ++ + N+I + A+ +L++NS+DA + + I + Q+ Sbjct: 13 MQAVRMDPALANRIGLH---HTLASAVADLVDNSIDARARAICIRILLASDAPVGL-QVI 68 Query: 58 DNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQN 115 D+G GM + A+ T + D G G L S+ + + SR Sbjct: 69 DDGRGMDLAAVDAAMMYAGTRQYGD-----TDLGHFGVGLKAASLSQADTVLICSRARGA 123 >gi|256421132|ref|YP_003121785.1| hypothetical protein Cpin_2091 [Chitinophaga pinensis DSM 2588] gi|256036040|gb|ACU59584.1| hypothetical protein Cpin_2091 [Chitinophaga pinensis DSM 2588] Length = 642 Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 27/49 (55%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 P +A+ EL+ N+ DA +++V+ I + + DNG G+T E+ Sbjct: 27 HSPEVALTELVSNAWDAGATKVDIFIPEHSGDYLTVADNGTGLTPEDFE 75 >gi|323356692|ref|YP_004223088.1| hypothetical protein MTES_0244 [Microbacterium testaceum StLB037] gi|323273063|dbj|BAJ73208.1| hypothetical protein MTES_0244 [Microbacterium testaceum StLB037] Length = 715 Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%) Query: 24 SIAIKELIENSLDAESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTSKIS- 81 + + EL+ N+ DA+++ VE GG F +I+D+G GMT EE+ SK + Sbjct: 41 AAVVSELVANAWDADANLVEINWNAGGDDAFVEISDDGRGMTREELKRKFLTVGYSKRTT 100 Query: 82 ----DDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKIS 129 D G +G S+ +++ + + S +I + K Sbjct: 101 EGGLSDGYKRPFMGRKGIGKLSVFSIADTVEVHSARNGERNAFRIEVDELKKR 153 >gi|29826536|ref|NP_828842.1| putative DNA mismatch repair protein [Streptomyces avermitilis MA-4680] gi|29611334|dbj|BAC75377.1| putative DNA mismatch repair protein [Streptomyces avermitilis MA-4680] Length = 683 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 12/62 (19%) Query: 13 QIAAGEIIERPSIAIKELIENSLDAESSRVETVIAG--GGKSFFQITDNGFGMTSEEIPM 70 QIAA + EL+ N+LDA ++ V+ + + +TDNG GMT++ Sbjct: 34 QIAA----------VAELVWNALDANATLVDVELRRDWDAITQIVVTDNGHGMTTDRARA 83 Query: 71 AV 72 A Sbjct: 84 AF 85 >gi|325967842|ref|YP_004244034.1| DNA topoisomerase VI subunit beta [Vulcanisaeta moutnovskia 768-28] gi|323707045|gb|ADY00532.1| DNA topoisomerase VI, B subunit [Vulcanisaeta moutnovskia 768-28] Length = 536 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 10/65 (15%) Query: 27 IKELIENSLDAESS-----RVETVIAGGGKSF----FQITDNGFGMTSEEIPMAVQR-HC 76 I+EL+ENSLDA + ++ I +S + DNG G+ +EIP R Sbjct: 38 IRELVENSLDATETFKILPSIKIYIDYANQSRSWISIYVEDNGIGIPGDEIPNVFGRVFY 97 Query: 77 TSKIS 81 +SK Sbjct: 98 SSKYR 102 >gi|290957802|ref|YP_003488984.1| hypothetical protein SCAB_33361 [Streptomyces scabiei 87.22] gi|260647328|emb|CBG70433.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 622 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 34/137 (24%) Query: 20 IERPSIAIK---------------ELIENSLDAESSRVETV-----IAGGGKSF-----F 54 I P++ +K ELI+NS+DA+++ VE + G ++ Sbjct: 10 IVSPALTVKAMRDSGYKNTAYALAELIDNSIDAKATLVEVFACENPVQVGSRTSHRVETI 69 Query: 55 QITDNGFGMTSEEIPMAVQRHCTSKISD-DFSNIHTFGFRGEALP--SIGAVSHLTLMSR 111 + DNG GM ++++ A+ K D D ++ G G LP S+ + L + S Sbjct: 70 AVLDNGHGMEAQQLRRAL------KYGDGDGADPGRIGRFGMGLPNSSMSQCTRLDVWSW 123 Query: 112 PPQNNTGAQIAISGEKI 128 +S E+I Sbjct: 124 TNGAGNAMWTYLSLEEI 140 >gi|257051218|ref|YP_003129051.1| DNA topoisomerase VI subunit B [Halorhabdus utahensis DSM 12940] gi|256689981|gb|ACV10318.1| DNA topoisomerase VI, B subunit [Halorhabdus utahensis DSM 12940] Length = 807 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 61/191 (31%), Gaps = 46/191 (24%) Query: 23 PSIAIKELIENSLDA--ESS---RVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQR-H 75 A+KE ++NSLDA E+ V I G I DNG G+T E++P + Sbjct: 43 LVTAVKEGVDNSLDACEEADIFPDVYVEIEDVGEYYRLVIEDNGPGITREQLPKVFGKLL 102 Query: 76 CTSKISDDFSNIHTFGFRGE---ALPSIGAV--SHLT------LMSRPPQNNTGAQIA-- 122 S+ N RG+ + AV S LT + SR + Sbjct: 103 YGSRFHKREQN------RGQQGIGIS--AAVLYSQLTSGKPAKITSRTKGSEEAHYFELI 154 Query: 123 ------ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 + GT +EV L + AR D I+ A Sbjct: 155 IDTDTNEPEIDVDETTTWDRPHGTRIEVE-LEANLRARQQLH-----------DYIKHTA 202 Query: 177 IAYPKVSFTFS 187 + P F Sbjct: 203 VVNPHARIEFH 213 >gi|323693323|ref|ZP_08107541.1| hypothetical protein HMPREF9475_02404 [Clostridium symbiosum WAL-14673] gi|323502806|gb|EGB18650.1| hypothetical protein HMPREF9475_02404 [Clostridium symbiosum WAL-14673] Length = 488 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 5/128 (3%) Query: 1 MKIRKLSEKIINQIAAGEII-ERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 MK + + I + I A+ ++I+NS+ A + V+ ++ I DN Sbjct: 1 MKTKSMPPYAPTLIESTRAIGYSLEAAVADIIDNSIAANAKNVDIYFFPVDGAYIAILDN 60 Query: 60 GFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNT 117 G GMT EEI +A+Q SK + + G G L S+ LT++S+ N Sbjct: 61 GKGMTEEEIDVAMQ--YGSKNPTEERDKKDLGRFGLGLKTASLSQCRCLTVISKQGDNLE 118 Query: 118 GAQIAISG 125 G Q I Sbjct: 119 GRQWDIDH 126 >gi|256374745|ref|YP_003098405.1| hypothetical protein Amir_0595 [Actinosynnema mirum DSM 43827] gi|255919048|gb|ACU34559.1| hypothetical protein Amir_0595 [Actinosynnema mirum DSM 43827] Length = 629 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 25/122 (20%) Query: 29 ELIENSLDAESSRVETV-----IAGGGKSF-----FQITDNGFGMTSEEIPMAVQRHCTS 78 ELI+NS+DA ++ VE + ++ + DNG GM SE + A+ Sbjct: 38 ELIDNSIDAGATLVEVFACESPVQVSSRTRQRVETIAVLDNGKGMDSETLRRAL------ 91 Query: 79 K----ISDDFSNIHTFGFRGEALP--SIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVR 132 K + DD I FG LP S+ + + + S + +I+ R Sbjct: 92 KYGDGLGDDRKRIGRFGM---GLPNSSMSQCTRVEVWSWTNGPGNALYTYLDLAEINDGR 148 Query: 133 PV 134 Sbjct: 149 DA 150 >gi|257063787|ref|YP_003143459.1| DNA mismatch repair enzyme (predicted ATPase) [Slackia heliotrinireducens DSM 20476] gi|256791440|gb|ACV22110.1| DNA mismatch repair enzyme (predicted ATPase) [Slackia heliotrinireducens DSM 20476] Length = 360 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 8/127 (6%) Query: 16 AGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQI-TDNGFGMTSEEIPMAVQR 74 A + I A+ E++ N+ DA + V A G + D+ G+ + Sbjct: 42 AQQDIRSVEDAVIEMLRNARDAGARTVFVASAKSGAERTVVMVDDACGVPLNMWDTIFEP 101 Query: 75 HCTSKISDDFS-NIHTFGFRGEALPSI---GAVSHLTLMSRPPQNNTGAQIAISGEKISS 130 TSK+ + G RG AL SI ++ + S + ++ K++ Sbjct: 102 RVTSKLDSMLFDDWGVHG-RGMALYSIKQNATLAQVE--SSVEGGGSAFRVVFDTSKLTE 158 Query: 131 VRPVAMN 137 + Sbjct: 159 RADQSTC 165 >gi|229056683|ref|ZP_04196087.1| hypothetical protein bcere0026_8030 [Bacillus cereus AH603] gi|228720619|gb|EEL72180.1| hypothetical protein bcere0026_8030 [Bacillus cereus AH603] Length = 494 Score = 58.1 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 31 IENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMA 71 ++NS+DA++ + G + +I DNG GMT +E+ A Sbjct: 32 VDNSIDAKAEYIHIEFEYDMGNGYIRIEDNGIGMTDDELQRA 73 >gi|295830067|gb|ADG38702.1| AT4G02460-like protein [Neslia paniculata] Length = 199 Score = 58.1 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 6/161 (3%) Query: 203 GNFPERISQVIGEDFINNAVELNEKS-NEITLQGYTGIPTFN--RGNANQFYVFINGRTV 259 G+ + I V G + ++ ++ ++G+ P R A++ Y+FINGR V Sbjct: 2 GSLKDNIITVFGMSTFTSLQPVSISISDDCRVEGFLSKPGQGTGRNLADRQYLFINGRPV 61 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 + + Y +T +YPVV+L + D+NV P K + F + T + + Sbjct: 62 DMPKVSKLVNELYKDT-SSRKYPVVILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLR 120 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 + + + S +++ +S D A + L + + Sbjct: 121 GGLNEIYSSSN--ASYTVNRFEENSEQPDKAGVSSLQEKSN 159 >gi|300118608|ref|ZP_07056346.1| ATP-binding protein [Bacillus cereus SJ1] gi|298723997|gb|EFI64701.1| ATP-binding protein [Bacillus cereus SJ1] Length = 494 Score = 58.1 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 31 IENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMA 71 ++NS+DA++ + G + +I DNG GMT +E+ A Sbjct: 32 VDNSIDAKAEYIHIEFEYDMGNGYIRIEDNGIGMTDDELQRA 73 >gi|295830057|gb|ADG38697.1| AT4G02460-like protein [Capsella grandiflora] Length = 199 Score = 58.1 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 6/161 (3%) Query: 203 GNFPERISQVIGEDFINNAVELNEKS-NEITLQGYTGIPTFN--RGNANQFYVFINGRTV 259 G+ + I V G + ++ ++ ++G+ P R A++ Y FINGR V Sbjct: 2 GSLKDNIITVFGLSIFTSLQPVSISISDDCRVEGFLSKPGQGTGRNLADRQYFFINGRPV 61 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 + + Y +T +YPV +L + D+NV P K + F + T + + Sbjct: 62 DMPKVSKLVNELYKDT-SSRKYPVAILDFIVPGGACDLNVTPDKRKVFFADETSVIGSLR 120 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 + + + + S ++K +S D A + L + ++ Sbjct: 121 EGLNEIYSSSN--ASYTVNKFEENSEQPDKAGVSSLQEKSS 159 >gi|295830063|gb|ADG38700.1| AT4G02460-like protein [Capsella grandiflora] Length = 199 Score = 58.1 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 6/161 (3%) Query: 203 GNFPERISQVIGEDFINNAVELNEKS-NEITLQGYTGIPTFN--RGNANQFYVFINGRTV 259 G+ + I V G + ++ ++ ++G+ P R A++ Y FINGR V Sbjct: 2 GSLKDNIITVFGMSTFTSLQPVSISISDDCRVEGFLSKPGQGTGRNLADRQYFFINGRPV 61 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 + + Y +T +YPV +L + D+NV P K + F + T + + Sbjct: 62 DMPKVSKLVNELYKDT-SSRKYPVTILDFIVPGGACDLNVTPDKRKVFFADETSVIGSLR 120 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 + + K + S +++ +S D A + L + ++ Sbjct: 121 EGLNKIYSSSN--ASYTVNRFEENSEQPDKAGVSSLQEKSS 159 >gi|326772740|ref|ZP_08232024.1| hypothetical protein HMPREF0059_01128 [Actinomyces viscosus C505] gi|326637372|gb|EGE38274.1| hypothetical protein HMPREF0059_01128 [Actinomyces viscosus C505] Length = 504 Score = 58.1 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 7/72 (9%) Query: 7 SEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVI--AGGGKSFFQITDNGFGMT 64 I + + A S A+ +L++NS+DA +S+V I + + D+G GM Sbjct: 17 DPSIADALGAH---HELSTALADLVDNSIDAGASQVRIRILTDDDYVTGVLVIDDGHGMD 73 Query: 65 SE--EIPMAVQR 74 + MA+ R Sbjct: 74 EAGIDAAMALSR 85 >gi|148241091|ref|YP_001220592.1| hypothetical protein BBta_p0286 [Bradyrhizobium sp. BTAi1] gi|146411467|gb|ABQ39920.1| hypothetical protein BBta_p0286 [Bradyrhizobium sp. BTAi1] Length = 681 Score = 58.1 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 7/58 (12%) Query: 22 RPSIAIKELIENSLDAESSRVETVIAG---GGKSFFQITDNGFGMTS----EEIPMAV 72 P A+ E + N+LDA+++ V + GG + D+G G++ E+ Sbjct: 21 DPIRALAEFVWNALDADATNVSVELNRNALGGLDAITVRDDGNGISRARAMEDFENLG 78 >gi|217969389|ref|YP_002354623.1| hypothetical protein Tmz1t_0961 [Thauera sp. MZ1T] gi|217506716|gb|ACK53727.1| conserved hypothetical protein [Thauera sp. MZ1T] Length = 587 Score = 58.1 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 11/71 (15%) Query: 26 AIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDF 84 A+KEL++N+ DA++ +V V+ I D+G GMT EE+ RH S I+ D Sbjct: 28 ALKELVDNAWDADAEQVTIVLPKPLSGDPIVIQDDGTGMTEEELR----RHYLS-IAADR 82 Query: 85 SNIHTFGFRGE 95 + RGE Sbjct: 83 RS-----RRGE 88 >gi|307595996|ref|YP_003902313.1| DNA topoisomerase VI subunit B [Vulcanisaeta distributa DSM 14429] gi|307551197|gb|ADN51262.1| DNA topoisomerase VI, B subunit [Vulcanisaeta distributa DSM 14429] Length = 539 Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 10/65 (15%) Query: 27 IKELIENSLDAESS-----RVETVIAGGGKSF----FQITDNGFGMTSEEIPMAVQR-HC 76 I+EL+ENSLDA + ++ I +S + DNG G+ +EIP R Sbjct: 38 IRELVENSLDATETFKILPSIKIYIDYADQSRNWVSIYVEDNGIGIPGDEIPNVFGRVFY 97 Query: 77 TSKIS 81 +SK Sbjct: 98 SSKYR 102 >gi|159041784|ref|YP_001541036.1| DNA topoisomerase VI subunit B [Caldivirga maquilingensis IC-167] gi|157920619|gb|ABW02046.1| DNA topoisomerase VI, B subunit [Caldivirga maquilingensis IC-167] Length = 528 Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 66/188 (35%), Gaps = 16/188 (8%) Query: 27 IKELIENSLDA----------ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-H 75 ++ELIEN+LDA ++S + V + DNG G+ EEIP + Sbjct: 40 VRELIENALDATENHGILPSIKAS-IRYVDKDKDLYSIYVEDNGIGIPEEEIPNVFGQIF 98 Query: 76 CTSKIS-DDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRP 133 +SK I G + L + + + S + IS + + + Sbjct: 99 YSSKYKIKQHRGIFGLGAKMVVLYAQSTSGMPVRVTSSMKGSQYIYTYEISIDTVKNKPV 158 Query: 134 VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNR 193 + + VE + + ++ + Q + I + R A+ P + Sbjct: 159 IHSHVR--VENKYGWHGTAVKVVLEGNWQYAKSRIEEYFTRTAMITPYAEIILIEPNNEV 216 Query: 194 YKMNFQST 201 + N +T Sbjct: 217 LRFNRITT 224 >gi|41614939|ref|NP_963437.1| DNA topoisomerase VI subunit B [Nanoarchaeum equitans Kin4-M] gi|40068663|gb|AAR38998.1| NEQ144 [Nanoarchaeum equitans Kin4-M] Length = 567 Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Query: 27 IKELIENSLDA--ESS---RVETVIAGGGKSFFQITDNGFGMTSEEIPMAV 72 +KEL++N+LDA E+ ++ + G ++ DNG G+ E+P Sbjct: 34 VKELVDNALDATEEARILPTIKVTLKEGKYMTVRVEDNGPGIPFNEVPNVF 84 >gi|254444906|ref|ZP_05058382.1| hypothetical protein VDG1235_3149 [Verrucomicrobiae bacterium DG1235] gi|198259214|gb|EDY83522.1| hypothetical protein VDG1235_3149 [Verrucomicrobiae bacterium DG1235] Length = 659 Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%) Query: 19 IIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEI 68 I+ P A+ EL+ N+ DA + V+ + ++DNG GMT +E Sbjct: 28 IVTDPITALVELVANAWDAGAKEVKIDWSADESGEIAVSDNGGGMTEDEF 77 >gi|197105891|ref|YP_002131268.1| hypothetical protein PHZ_c2430 [Phenylobacterium zucineum HLK1] gi|196479311|gb|ACG78839.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 507 Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 13/110 (11%) Query: 15 AAGEIIERPSIAIKELIENSLDAESSRVETVIA--GGGKSF-FQITDNGFGMTSEEIPMA 71 AAG A+ +LI+NS+ A+++ + GG I DNG GM++EE+ A Sbjct: 37 AAG---HTLVSAVADLIDNSISAQATEIHITFGQPNGGHGRWMTIRDNGVGMSAEELDEA 93 Query: 72 VQRHCTSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGA 119 ++ + D + G G L S +++R + Sbjct: 94 LRIGG----AAD-YGPRSLGKFGFGLKGASWSQARRFKVITRQAGGSIRH 138 >gi|322499462|emb|CBZ34535.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1007 Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GYT PT VFIN R V+ I I Y+ + G P VLLL + + Sbjct: 24 GYTSDPTLA-QRKQYLCVFINQRLVESAAIRKAIDAVYSGVLTGGHRPFTVLLLSVPTDR 82 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKA 325 VDVNVHP K + + +I + + + + A Sbjct: 83 VDVNVHPTKKEVCLLDEELIVSRVAEVCRGA 113 >gi|146088024|ref|XP_001465972.1| mismatch repair protein [Leishmania infantum JPCM5] gi|134070073|emb|CAM68405.1| putative mismatch repair protein [Leishmania infantum JPCM5] Length = 1007 Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 GYT PT VFIN R V+ I I Y+ + G P VLLL + + Sbjct: 24 GYTSDPTLA-QRKQYLCVFINQRLVESAAIRKAIDAVYSGVLTGGHRPFTVLLLSVPTDR 82 Query: 295 VDVNVHPAKSYIRFRNPTIIRNFIIQSIQKA 325 VDVNVHP K + + +I + + + + A Sbjct: 83 VDVNVHPTKKEVCLLDEELIVSRVAEVCRGA 113 >gi|90425780|ref|YP_534150.1| hypothetical protein RPC_4308 [Rhodopseudomonas palustris BisB18] gi|90107794|gb|ABD89831.1| hypothetical protein RPC_4308 [Rhodopseudomonas palustris BisB18] Length = 702 Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 95/324 (29%), Gaps = 58/324 (17%) Query: 1 MKIRKLSEKIINQIAAGEII---ERPSIAIKELIENSLDAESSRVETV------------ 45 MKI +L ++++ + +R S I EL+ NS DA+++ V Sbjct: 1 MKISRL---TVDKLG----VKLYDRASAVIAELVSNSYDADATEVRISAPMGQYLASKAG 53 Query: 46 --IAGGGKSFFQITDNGFGMTS-----------EEIPMAVQRHCTSKISDDFSNIHTFGF 92 I G + DNG GM + + +R TSK G Sbjct: 54 GQIIDKGFEII-VQDNGLGMDPRGMQEFFLVVGSDRRLDAKRGDTSK----LYGRKVMGR 108 Query: 93 RGEA-LPSIGAVSHLTLMS--------RPPQNNTGAQIAISGEKISSVRPVAMNPGTIVE 143 +G L G L ++S R NT S + V + G Sbjct: 109 KGVGKLAPFGICKTLEVISSGGEKVVRRQAGGNTETGYLTSHILLDYDDIVGDDDGDYQP 168 Query: 144 VRDLFFT--IPARLNFLKSEQVETNLITDV--IRRMAIAYPKVS---FTFSTIKSNRYKM 196 P+R +K + + ++ + R + + S Sbjct: 169 TVGSLDNSVQPSRGTTIKLSRFSYRRVPEIEHLSRQVAQRFGIRSDKWKVLLRDSTMTDG 228 Query: 197 NFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI-N 255 S I+ + G + ++ GY + F + Sbjct: 229 ANGSEVSVGEFDINVMEGTRIEF-MGPDGPTVSTVSADGYQARTPIGDLITSFNAGFSHD 287 Query: 256 GRTVQDKFILSTIRTAYAETIPLG 279 GR K ++ R +Y + + G Sbjct: 288 GRFYPVKGWVAYARESYRDDLMAG 311 >gi|295830055|gb|ADG38696.1| AT4G02460-like protein [Capsella grandiflora] Length = 199 Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 6/161 (3%) Query: 203 GNFPERISQVIGEDFINNAVELNEKS-NEITLQGYTGIPTFN--RGNANQFYVFINGRTV 259 G+ + I V G + ++ ++ ++G+ P R A++ Y FINGR V Sbjct: 2 GSLKDNIITVFGLSIFTSLQPVSISISDDCRVEGFLSKPGQGTGRNLADRQYFFINGRPV 61 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 + + Y +T +YPV +L + D+NV P K + F + T + + Sbjct: 62 DMPKVSKLVNELYKDT-SSRKYPVAILDFIVPGXACDLNVTPDKRKVFFADETSVIGSLR 120 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 + + + + S ++ +S D A + L + ++ Sbjct: 121 EGLNEIYSSSN--ASYTVNXFEENSEQPDKAGVSSLQEKSS 159 >gi|167045162|gb|ABZ09824.1| putative histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [uncultured marine microorganism HF4000_APKG8K5] Length = 487 Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 5/119 (4%) Query: 22 RPSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 A+ +L++NS+ A +S VE G+ + D+G+GM+ E+ A R S Sbjct: 25 DLGSALADLVDNSIKATASIVEITCFWNDGQPVISVKDDGYGMSKAELHSA-MRLA-SID 82 Query: 81 SDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMN 137 D G G L S L++ S+ GA+ + K + + Sbjct: 83 PRDERAAEDLGRFGLGLKTASFSQCRRLSVFSKRKGKTAGARWDLDDLKDKFLMEIPSP 141 >gi|83749187|ref|ZP_00946189.1| Hypothetical protein RRSL_00958 [Ralstonia solanacearum UW551] gi|207742685|ref|YP_002259077.1| hypothetical protein RSIPO_00875 [Ralstonia solanacearum IPO1609] gi|83724128|gb|EAP71304.1| Hypothetical protein RRSL_00958 [Ralstonia solanacearum UW551] gi|206594079|emb|CAQ61006.1| hypothetical protein RSIPO_00875 [Ralstonia solanacearum IPO1609] Length = 649 Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 16 AGEIIERPSIAIKELIENSLDAESSRVETVIAGGGK-SFFQITDNGFGMTSEEIP 69 AG II P+ AI EL+ N DA ++ V+ F+I DNG GMT EE Sbjct: 17 AGAIITDPATAIVELVANCWDAYATEVKITWPDVQLEKQFKIADNGHGMTREEFQ 71 >gi|288930741|ref|YP_003434801.1| DNA topoisomerase VI subunit beta [Ferroglobus placidus DSM 10642] gi|288892989|gb|ADC64526.1| DNA topoisomerase VI, B subunit [Ferroglobus placidus DSM 10642] Length = 592 Score = 57.4 bits (137), Expect = 6e-06, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 62/186 (33%), Gaps = 43/186 (23%) Query: 25 IAIKELIENSLDA--ESS---RVETVIAGGGKSF-FQITDNGFGMTSEEIPMAV------ 72 +KE ++NSLDA E+ + I GK++ + DNG G+ EEIP Sbjct: 30 TCVKEAVDNSLDACEEAGILPDILVKIFRVGKNYRIIVEDNGPGIEKEEIPKVFGKLLYG 89 Query: 73 QRHCTSKISDDFSNIHTFGFRGEALPSI---GAVSH---LTLMSRPPQNNTG-------A 119 R T K + G +G + S +S ++S+ + Sbjct: 90 SRFHTIK--------QSRGQQGIGISSAVLYAQISTGKPAKILSKVEGDEAYEIELFINT 141 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + GT +E+ + + + + + +R+ +I Sbjct: 142 KKNEPEIVSEKKVEWYAPHGTRIELEIVGSYVKEKRQS----------VYEYLRQTSIVN 191 Query: 180 PKVSFT 185 P T Sbjct: 192 PHAKIT 197 >gi|78485984|ref|YP_391909.1| hypothetical protein Tcr_1643 [Thiomicrospira crunogena XCL-2] gi|78364270|gb|ABB42235.1| Conserved hypothetical protein [Thiomicrospira crunogena XCL-2] Length = 361 Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 18/178 (10%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEE----IPMAVQRHCTSKIS 81 + EL+ N+ DA + V + S + D+G GMT E Q T+ Sbjct: 31 VLAELVANAYDANAKNVYIISDN---STITVEDDGNGMTYESGVKKFLNVAQESRTN--E 85 Query: 82 DDFSNIHT------FGFRGEA-LPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRP 133 +D + G +G L ++ VS + + + + +G ++ + S+ P Sbjct: 86 EDLYVEGSNRLRKKMGRKGVGKLAALA-VSKEVEVKTIRGGDKSGFILSREVGEDHSLEP 144 Query: 134 VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKS 191 + + VRD I + K + ++++ + Sbjct: 145 IEEEDIQFLSVRDHGTAIVMKAPQYKIHKTLNAAKKNLLKIFPLVNQDFQIHLQIGNK 202 >gi|3695293|gb|AAC62762.1| unknown [Phaeosphaeria nodorum] Length = 576 Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 92/280 (32%), Gaps = 17/280 (6%) Query: 166 NLITDVIRRMAIAYPKVSFTFSTIKSNRYK---MNFQSTNGNFPERISQVIGEDFINNAV 222 I +++ A+A P V F +K+ K + ++ N + + +VI +D Sbjct: 1 MKIRRLMQAYALARPAVRFKLHVLKAKNNKGDFIYAPKSDSNVEDAVLKVISKDCALQCD 60 Query: 223 ELNEKSNEITLQGYTGIPTFNRGNANQFYVFI--NGRTVQD-KFILSTIRTAYAETIPLG 279 +S+ + + PT NR + FI + R V + + + + A+ E + Sbjct: 61 WTALESDGFEIHAFLPKPTANRSKIANYGAFISIDSRPVSNSRGTIKQVVAAFKERLRKS 120 Query: 280 -------RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRN----FIIQSIQKAINK 328 + P + + P D N+ PAK + F + ++ + +AI + Sbjct: 121 SQSLTAVKDPFFCMNIICPPDSYDPNIEPAKDDVMFDDSKVVLEVVDNLLRSHYPEAIME 180 Query: 329 KGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPT 388 + + + S + + +E Q ++ Sbjct: 181 MEVEPPTSAQQHAGSDIEEIESHVPDPAHLKPPAEMVREPRSDQHSKDPRWRPSMYGIDE 240 Query: 389 YSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 ++ + + G A + + I++ + Sbjct: 241 EDLEHIQEDHPLVIEEEEGRLAADVSNPWTIARMNASIKP 280 >gi|119872357|ref|YP_930364.1| DNA topoisomerase VI subunit B [Pyrobaculum islandicum DSM 4184] gi|119673765|gb|ABL88021.1| DNA topoisomerase VI, B subunit [Pyrobaculum islandicum DSM 4184] Length = 528 Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 18/77 (23%) Query: 21 ERPSIA----IKELIENSLDAESSR---------VETVIAGG--GKSFFQITDNGFGMTS 65 P+ A I+EL+ENSLDA + + I G + + DNG G+ Sbjct: 26 HNPARALYQTIRELVENSLDA--TETYGILPNIYIRVSIEDEQKGWASVYVEDNGIGIPG 83 Query: 66 EEIPMAVQR-HCTSKIS 81 EIP R +SK Sbjct: 84 NEIPNVFGRVFYSSKYK 100 >gi|294101440|ref|YP_003553298.1| histidine kinase [Aminobacterium colombiense DSM 12261] gi|293616420|gb|ADE56574.1| histidine kinase [Aminobacterium colombiense DSM 12261] Length = 185 Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 32 ENSLDAESSRVETVIAG---GGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 ENS++A ++ V+ I GG +F++ DNG GM + + TS Sbjct: 14 ENSINAGATWVDIRITEDCAGGWLYFEVKDNGKGMDGDTLLAVTDPFYTS 63 >gi|291288021|ref|YP_003504837.1| integral membrane sensor signal transduction histidine kinase [Denitrovibrio acetiphilus DSM 12809] gi|290885181|gb|ADD68881.1| integral membrane sensor signal transduction histidine kinase [Denitrovibrio acetiphilus DSM 12809] Length = 453 Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Query: 30 LIENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI NS DA ++++ A G + DNG G+ + T+K Sbjct: 361 LINNSYDAGATKIHISFAMDGDIITITVQDNGTGIPEGSRDKIFRPFYTTK 411 >gi|119719576|ref|YP_920071.1| DNA topoisomerase VI subunit B [Thermofilum pendens Hrk 5] gi|119524696|gb|ABL78068.1| DNA topoisomerase VI, B subunit [Thermofilum pendens Hrk 5] Length = 516 Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 10/67 (14%) Query: 23 PSIAIKELIENSLDAESSR-----VETVI----AGGGKSFFQITDNGFGMTSEEIPMAVQ 73 A++EL+ENSLDA + ++ I ++ DNG G+ E+P Sbjct: 30 LYQAVRELVENSLDATETHGILPFIDVEIRLHEERPEWVVLRVADNGIGIPLSEVPNVFG 89 Query: 74 R-HCTSK 79 R SK Sbjct: 90 RVFYGSK 96 >gi|297159205|gb|ADI08917.1| hypothetical protein SBI_05797 [Streptomyces bingchenggensis BCW-1] Length = 651 Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 10/86 (11%) Query: 31 IENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHT 89 ++NS+ A+++ V + G +S+ +I+DNG GM +E + A + D T Sbjct: 210 VDNSVSADATTVHVTVHFDGTRSWIRISDNGRGMDAETLSEAFR------YGSDREYNRT 263 Query: 90 -FGFRGEAL--PSIGAVSHLTLMSRP 112 G G L S LT++SR Sbjct: 264 ELGRFGFGLKSASTSQCRKLTVLSRA 289 >gi|295830059|gb|ADG38698.1| AT4G02460-like protein [Capsella grandiflora] Length = 199 Score = 57.0 bits (136), Expect = 8e-06, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 6/161 (3%) Query: 203 GNFPERISQVIGEDFINNAVELNEKS-NEITLQGYTGIPTFN--RGNANQFYVFINGRTV 259 G + I V G + ++ ++ ++G+ P R A++ Y FINGR V Sbjct: 2 GLLKDNIITVFGMSTFTSLQPVSISISDDCRVEGFLSKPGQGTGRNLADRQYFFINGRPV 61 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 + + Y +T +YPV +L + D+NV P K + F + T + + Sbjct: 62 DMPKVSKLVNELYKDT-SSRKYPVAILDFIVPGGACDLNVTPDKRKVFFADETSVIGSLR 120 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 + + + + S +++ +S D A + L + ++ Sbjct: 121 EGLNEIYSSSN--ASYTVNRFEENSEQPDKAGVSSLQEKSS 159 >gi|315186945|gb|EFU20703.1| histidine kinase [Spirochaeta thermophila DSM 6578] Length = 207 Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 23 PSIAIKELIENSLDAESSRVET--VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 S I EL++NSL+A + +E G + ++ D+G GM+ EE A+ T Sbjct: 5 LSDLILELVQNSLEAGARTIEVFCSTREGWCT-VRVKDDGRGMSPEEKERALDPFFT 60 >gi|320007879|gb|ADW02729.1| ATP-binding region ATPase domain protein [Streptomyces flavogriseus ATCC 33331] Length = 491 Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 25/120 (20%) Query: 14 IAAGE---IIERPSI-------AIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFG 62 IAA E ++ S AI +L++NS+ A +S ++ G+ + D+G G Sbjct: 5 IAAPEPAGMVASLSSLGYSLPAAIADLVDNSVSAGASTIDVEFTWAGQDSWIAVADDGAG 64 Query: 63 MTSEEIPMA---VQRH-CTSKISDDFSNIHTFGFRGEALPSIGAVS---HLTLMSRPPQN 115 MT+ E+ A R T + S D G G L S + S LT+ + Sbjct: 65 MTASELVTAMTVAARGPATPRSSTDL------GRFGVGLKS-ASFSQARQLTVATATSDE 117 >gi|322797579|gb|EFZ19621.1| hypothetical protein SINV_14574 [Solenopsis invicta] Length = 285 Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 81/222 (36%), Gaps = 1/222 (0%) Query: 263 FILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSI 322 I + Y+ +P +P + L+I+P+ +DVNVHP K +RF + I + ++ Sbjct: 1 AIRRMLEDLYSVYLPKKAHPWCYISLDINPQNIDVNVHPTKHEVRFLHEDAIIERMKFAL 60 Query: 323 QKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT-SLTNTQEKLFLQENRLSTNDL 381 + + S + L ++ + + LP+Y + N +K++ +E + + Sbjct: 61 DERLAGNSASRTFYLQARLPKADITKEVLEEVLPEYNKGNPDNKSKKIYAKEMIRTDSSD 120 Query: 382 LPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFE 441 D ++ + ++ E IA Q Y D L + + + Sbjct: 121 QKLDKFNFTIHFEQPDDPEEDKPVDVIADKARKQVYQYFGNRDILERTQKSSEKRKEQTL 180 Query: 442 KMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRL 483 + D +S + + L E + + + Sbjct: 181 NITNDNTKEVESSVSNASQSQGVLSAETNVPTDESLKSIQQF 222 >gi|297623817|ref|YP_003705251.1| integral membrane sensor signal transduction histidine kinase [Truepera radiovictrix DSM 17093] gi|297164997|gb|ADI14708.1| integral membrane sensor signal transduction histidine kinase [Truepera radiovictrix DSM 17093] Length = 521 Score = 57.0 bits (136), Expect = 9e-06, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 22 RPSIAIKELIENSLDAESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHC 76 R + L++N+L+A +++V+ + G+ ++ DNG G+ +P R Sbjct: 397 RLKQVLLNLVQNALNAGATQVDVSLTLEGRRARLEVLDNGPGIPEGALPKLFDRFY 452 >gi|332981826|ref|YP_004463267.1| histidine kinase [Mahella australiensis 50-1 BON] gi|332699504|gb|AEE96445.1| histidine kinase [Mahella australiensis 50-1 BON] Length = 176 Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 30 LIENSLDAESSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHCT 77 LI+NS+ A +S ++ I G ++ DNG GM ++ + AV T Sbjct: 11 LIQNSISAGASLIKVSIVRDGDMLSIEVDDNGCGMDADAVAKAVDPFFT 59 >gi|213417422|ref|ZP_03350564.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 272 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 23/197 (11%), Positives = 62/197 (31%), Gaps = 3/197 (1%) Query: 327 NKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDD 386 + + + ++ + ++ + Q+ + L Sbjct: 13 RNHFAVPAEPTAAREPATPRYSDGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRTLLQTP 72 Query: 387 PTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQD 446 T + G + + + + + ++ A L ++ Sbjct: 73 TTSPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQL--T 130 Query: 447 FNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSK 506 + + +Q LL P + + E A + + L LGI+ + + IR +P L + Sbjct: 131 PGQSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTIRAVPLPLRQ 189 Query: 507 KNIPQLLRDIIDEIIDS 523 +N+ L+ ++I + Sbjct: 190 QNLQILIPELIGYLAQQ 206 >gi|237737313|ref|ZP_04567794.1| histidine Kinase [Fusobacterium mortiferum ATCC 9817] gi|229421175|gb|EEO36222.1| histidine Kinase [Fusobacterium mortiferum ATCC 9817] Length = 706 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSF-FQITDNG 60 KIR S II+ I II+ S + ELI+NS DA++ V + G+ I D+G Sbjct: 4 KIRP-SSNIIDSIGKNLIIDEISAIV-ELIKNSYDADAENVIINLEKNGEDLIITIEDDG 61 Query: 61 FGMT 64 GM+ Sbjct: 62 HGMS 65 >gi|167747920|ref|ZP_02420047.1| hypothetical protein ANACAC_02650 [Anaerostipes caccae DSM 14662] gi|167652651|gb|EDR96780.1| hypothetical protein ANACAC_02650 [Anaerostipes caccae DSM 14662] Length = 322 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 5/55 (9%) Query: 30 LIENSLDAESSRVETV---IAGGGK--SFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N+++A +S+ E + G+ + + D G G+ EE+P + + T+K Sbjct: 211 LLNNAIEASASKGEIKLTCVEQAGRRQTVISVEDKGCGIPKEELPYLFEPYHTTK 265 >gi|237745764|ref|ZP_04576244.1| LOW QUALITY PROTEIN: hsp90-like protein [Oxalobacter formigenes HOxBLS] gi|229377115|gb|EEO27206.1| LOW QUALITY PROTEIN: hsp90-like protein [Oxalobacter formigenes HOxBLS] Length = 225 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 14/77 (18%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 I +LSEKI QI A + ELI+N+ DA ++ V + I DNG G Sbjct: 8 ISELSEKIPTQIVA----------LNELIKNAYDAFATEVSIFLDLSNGKLI-IRDNGKG 56 Query: 63 MTSEEIPMAVQRHCTSK 79 M E++ SK Sbjct: 57 MNEEDVENLF---HLSK 70 >gi|261366516|ref|ZP_05979399.1| sensor protein ResE [Subdoligranulum variabile DSM 15176] gi|282571788|gb|EFB77323.1| sensor protein ResE [Subdoligranulum variabile DSM 15176] Length = 345 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 10/76 (13%) Query: 20 IERPSIAIKELIENSLD---AESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRH 75 IE S +K N+ D A ++ + ++DNG G+ E++P +R Sbjct: 239 IEAISNIVK----NAFDHTKAGAT-IRIAWRAFASMVQIIVSDNGSGIHPEDLPHIFKRF 293 Query: 76 CTSKISDDFSNIHTFG 91 S+ S D I G Sbjct: 294 YRSRFSKDTQGIG-LG 308 >gi|76802379|ref|YP_327387.1| DNA topoisomerase VI subunit B [Natronomonas pharaonis DSM 2160] gi|121696732|sp|Q3IPW6|TOP6B_NATPD RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|76558244|emb|CAI49832.1| DNA topoisomerase VI subunit B (type II DNA topoisomerase) [Natronomonas pharaonis DSM 2160] Length = 798 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 61/193 (31%), Gaps = 45/193 (23%) Query: 23 PSIAIKELIENSLDAESSR------VETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQR- 74 A+KE ++N+LDA + + I G + DNG G+T E+IP + Sbjct: 50 LVTAVKEAVDNALDA-AEEAGILPDIYVEIEDRGDYYRLTVEDNGPGITKEQIPKVFGKL 108 Query: 75 ------HCTSKISDDFSNIHTFGFRGEALPSIGAV--SHLT------LMSRPPQNNTG-- 118 H T G +G + AV S LT + S+ +++ Sbjct: 109 LYGSRFHA---------REQTRGQQGIGIS--AAVLYSQLTSGKPAKITSKTDSHSSAQY 157 Query: 119 ------AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 GT +E+ + + AR + + Sbjct: 158 FELTIDTDTNEPEIDHEREATWERPHGTRIELE-MEGNMRARKQLHDYIKYTAVVNPHA- 215 Query: 173 RRMAIAYPKVSFT 185 R+ P+ SF Sbjct: 216 -RVEFHEPEDSFK 227 >gi|227502122|ref|ZP_03932171.1| possible ATP-binding protein [Corynebacterium accolens ATCC 49725] gi|227077181|gb|EEI15144.1| possible ATP-binding protein [Corynebacterium accolens ATCC 49725] Length = 500 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 18/81 (22%) Query: 2 KIRKLSEKIINQ-------IAAGEIIERPSIAIKELIENSLDAESSRVETV--IAGGGKS 52 I + I I +G I EL++NS+DA++ ++ V + G + Sbjct: 13 TIHLTPTESIQHALGANHDICSG---------IDELVDNSIDAKAEKICIVFHVEGNRLT 63 Query: 53 FFQITDNGFGMTSEEIPMAVQ 73 + D+G GM + + ++ Sbjct: 64 QIAVHDDGRGMDTATMERVLR 84 >gi|114703019|ref|XP_001175436.1| PREDICTED: similar to PMS3, partial [Pan troglodytes] Length = 33 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 2/33 (6%) Query: 73 QRHCTSKISD--DFSNIHTFGFRGEALPSIGAV 103 +H TSKI + D + TFGFRGEAL S+ A+ Sbjct: 1 LKHHTSKIQEFADVPQVETFGFRGEALSSLCAL 33 >gi|156045195|ref|XP_001589153.1| hypothetical protein SS1G_09786 [Sclerotinia sclerotiorum 1980] gi|154694181|gb|EDN93919.1| hypothetical protein SS1G_09786 [Sclerotinia sclerotiorum 1980 UF-70] Length = 94 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 14/27 (51%) Query: 557 MNRLLREMEKNPNSSQCNHGRPTFIKL 583 M +++R M + C HGRPT L Sbjct: 1 MEKVVRHMGEIEQPWNCPHGRPTMRHL 27 >gi|210633080|ref|ZP_03297647.1| hypothetical protein COLSTE_01555 [Collinsella stercoris DSM 13279] gi|210159234|gb|EEA90205.1| hypothetical protein COLSTE_01555 [Collinsella stercoris DSM 13279] Length = 362 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 7/85 (8%) Query: 20 IERPSIAIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 I+ + E++ N+ DA + + G D+G G+ E TS Sbjct: 47 IQHVEDIVVEMLRNARDAGARSIYIATSKEEGVRTLLFIDDGSGVPEEMRERIFDARVTS 106 Query: 79 KISD---DFSNIHTFGFRGEALPSI 100 K+ D +H G RG AL SI Sbjct: 107 KLESMKMDRWGVH--G-RGMALFSI 128 >gi|94264184|ref|ZP_01287981.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93455442|gb|EAT05640.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 492 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 12/131 (9%) Query: 4 RKLSEKIINQIAA----GEIIERPSIAIKELIENSLDAESSRVETVIAGGGKS-FFQITD 58 ++L + A+ G AI +LI+NS+ AE+++V G+S I D Sbjct: 5 QRLPPSAASLSASMRDLG---YSLETAIADLIDNSISAEATQVGIYCDSTGESPTLAIID 61 Query: 59 NGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNN 116 NG GM ++EI +A RH T+ + G G L S LT++S Sbjct: 62 NGKGMNNKEI-LAAMRHGTANPRSE-RAPSDLGRFGLGLKTASFSQCRRLTVISAHNGAQ 119 Query: 117 TGAQIAISGEK 127 GA+ + Sbjct: 120 CGAEWNLDLID 130 >gi|313126397|ref|YP_004036667.1| DNA topoisomerase vi, b subunit [Halogeometricum borinquense DSM 11551] gi|312292762|gb|ADQ67222.1| DNA topoisomerase VI, B subunit [Halogeometricum borinquense DSM 11551] Length = 800 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 59/188 (31%), Gaps = 41/188 (21%) Query: 23 PSIAIKELIENSLDAESSR-------VETVIAGGG--KSFFQITDNGFGMTSEEIPMAVQ 73 A+KE ++N+LDA + + I G + + DNG G+T E+IP Sbjct: 47 LVTAVKEAVDNALDA--TEEAGIKPDISVEIRESGDYYTLI-VEDNGPGITKEQIPKVFG 103 Query: 74 R-------HCTSKISDDFSNIHTFGFRGEALPSIGAV--SHLT------LMSRPPQNNTG 118 + H + G +G + AV S LT + SR ++ Sbjct: 104 KLLYGSRFHA---------REQSRGQQGIGIS--AAVLYSQLTSGKPAKVTSRTQGDSAA 152 Query: 119 --AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 ++ I + V + + + L D ++ A Sbjct: 153 QYFELIIDTDTNEPEIQVEHELAPGESDLSPTHGTRIEVEMEANMRARQQLH-DYVKHTA 211 Query: 177 IAYPKVSF 184 + P Sbjct: 212 VVNPHARL 219 >gi|325066200|ref|ZP_08124873.1| hypothetical protein AoriK_00185 [Actinomyces oris K20] Length = 504 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Query: 30 LIENSLDAESSRVETVI--AGGGKSFFQITDNGFGMTSE--EIPMAVQR 74 L++NS+DA +S+V I + + D+G GM + MA+ R Sbjct: 37 LVDNSIDAGASQVRIRILTDDDYVTGMLVIDDGHGMDEAGIDAAMALSR 85 >gi|149922169|ref|ZP_01910608.1| hypothetical protein PPSIR1_01022 [Plesiocystis pacifica SIR-1] gi|149817013|gb|EDM76497.1| hypothetical protein PPSIR1_01022 [Plesiocystis pacifica SIR-1] Length = 569 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 38/82 (46%), Gaps = 9/82 (10%) Query: 28 KELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSN 86 +ELI+NSLDA S VE + GGK + D G GM E I + R +S D + Sbjct: 28 RELIQNSLDAGSQEVEIDFVHEGGKLVVHVNDWGAGMNREIIDTRLTRLFSSSKDGDRTK 87 Query: 87 IHTFGFRGEALPSIGAVSHLTL 108 I FG IG VS + Sbjct: 88 IGKFG--------IGFVSVFAI 101 >gi|254518452|ref|ZP_05130508.1| predicted protein [Clostridium sp. 7_2_43FAA] gi|226912201|gb|EEH97402.1| predicted protein [Clostridium sp. 7_2_43FAA] Length = 649 Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 19/148 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNG 60 M R +++ + ++I IE SI I ELI+NS DA + +V + K+ I DNG Sbjct: 12 MGPRTITDALGSKI-----IELDSIVIAELIKNSKDAHAKKVTINFSDY-KNSITIWDNG 65 Query: 61 FGMTSEEIP----MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQN 115 GM+ EEI + ++ + + T G +G SI + + T++++ + Sbjct: 66 DGMSIEEIKDKWGVVAS-------NNKSNEVDTLGGKGIGRFSIFKLCNSFTIITKKEHS 118 Query: 116 NTGAQIAISGEKISSVRPVAMNPGTIVE 143 N + + + + + +I+E Sbjct: 119 NE-YKFTFDIKDLYNHKSAEDYTISIIE 145 >gi|268571263|ref|XP_002648706.1| Hypothetical protein CBG25094 [Caenorhabditis briggsae] Length = 295 Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 12/89 (13%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAG-GGKSFFQITDNGFG 62 L+ ++Q P AI E ++NS DA + + +I D+G G Sbjct: 19 HLLNNSTVHQ--------SPQSAIAEFVDNSYDANAKNCSIEVYDTPNNERIEILDDGDG 70 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFG 91 MT E V+ ++K+ + I +G Sbjct: 71 MTRSEALNIVKFGFSNKVDN---AIGRYG 96 >gi|295830065|gb|ADG38701.1| AT4G02460-like protein [Capsella grandiflora] Length = 199 Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 68/161 (42%), Gaps = 6/161 (3%) Query: 203 GNFPERISQVIGEDFINNAVELNEKS-NEITLQGYTGIPTFN--RGNANQFYVFINGRTV 259 G+ + I V G + ++ ++ ++G+ P R A++ Y FINGR V Sbjct: 2 GSLKDNIITVFGLSXFTSLQPVSISISDDCRVEGFLSKPGQGTGRNLADRQYFFINGRPV 61 Query: 260 QDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFII 319 + + Y +T +YPV +L + D+NV P K + F + T + + Sbjct: 62 DMPKVSKLVNELYKDT-SSRKYPVAILDFIVPGGACDLNVTPDKRKVFFADETSVIGSLR 120 Query: 320 QSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYAT 360 + + + + S +++ +S D A + L + ++ Sbjct: 121 EGLNEIYSSSN--ASYXVNRFEENSEQPDKAGVSSLQEKSS 159 >gi|156937878|ref|YP_001435674.1| DNA topoisomerase VI subunit B [Ignicoccus hospitalis KIN4/I] gi|156566862|gb|ABU82267.1| DNA topoisomerase VI, B subunit [Ignicoccus hospitalis KIN4/I] Length = 553 Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 68/211 (32%), Gaps = 48/211 (22%) Query: 27 IKELIENSLDAESS-----RVETVIAG--------------------GGKSFFQITDNGF 61 +KE+++NSLDA + R+ VI G + DNG Sbjct: 44 VKEMLDNSLDATETHGILPRITIVIERLNEAKASKEEEEKKEIKGSKDGIYRITVDDNGI 103 Query: 62 GMTSEEIPMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAV--SHLTLMSRPPQNNTG 118 G+ ++IP A R +SK + T+G L AV + + Sbjct: 104 GVPQDKIPYAFGRMLYSSKYVE-RQTRGTYG-----LGVKAAVLYAQ-----KTTGEPAT 152 Query: 119 AQIAISGEKISSVRPVAMNPGT---------IVEVRDLFFTIPARLNFLKSEQVETNLIT 169 + +K++ V+ N T + + + + + + Sbjct: 153 VISSPIKDKMTYRFKVSTNISTNEPDVKERGSWTKSGDWHGTRVSVIIEGNWRRARSKVV 212 Query: 170 DVIRRMAIAYPKVSFTFSTIKSNRYKMNFQS 200 + +RR AI P T T + ++ Sbjct: 213 EYVRRTAIVAPYADITLITPDGTLIRYPRRT 243 >gi|317490508|ref|ZP_07948988.1| hypothetical protein HMPREF1023_02688 [Eggerthella sp. 1_3_56FAA] gi|316910401|gb|EFV32030.1| hypothetical protein HMPREF1023_02688 [Eggerthella sp. 1_3_56FAA] Length = 361 Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 13/95 (13%) Query: 11 INQIAAGEIIERPSIAIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 + I + E + E++ N+ DA + + + G + + D+G G+ + Sbjct: 43 AHDIRSTE------DIVIEMLRNARDAHAKSIFLAVSREGQRRRLVMIDDGDGVPAAMHE 96 Query: 70 MAVQRHCTSKISD---DFSNIHTFGFRGEALPSIG 101 + TSK+ D IH G RG AL SI Sbjct: 97 RIFEPRVTSKLDSMHMDKWGIH--G-RGMALYSIA 128 >gi|292655721|ref|YP_003535618.1| DNA topoisomerase VI subunit B [Haloferax volcanii DS2] gi|291371984|gb|ADE04211.1| DNA topoisomerase VI subunit B [Haloferax volcanii DS2] Length = 798 Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 57/188 (30%), Gaps = 40/188 (21%) Query: 23 PSIAIKELIENSLDAESSR-------VETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQR 74 A+KE ++N+LDA + + IA G I DNG G+T E++P + Sbjct: 47 LVTAVKEAVDNALDA--TEEAGIQPDIYVEIAEAGDYYRLVIEDNGPGITKEQVPKVFGK 104 Query: 75 -------HCTSKISDDFSNIHTFGFRGEALPSIGAV--SHLT------LMSRPPQNNTGA 119 H + G +G + AV S LT + SR + Sbjct: 105 LLYGSRFHA---------REQSRGQQGIGIS--AAVLYSQLTSGKPAKVTSRTQGSEDAE 153 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 + + + T D L + + L D I A+ Sbjct: 154 YFELVINTDQNEPEIRTEKTTSW---DRPHGTRIELEMEANMRARQQLH-DYILHTAVVN 209 Query: 180 PKVSFTFS 187 P Sbjct: 210 PHARIELR 217 >gi|297527443|ref|YP_003669467.1| DNA topoisomerase VI, B subunit [Staphylothermus hellenicus DSM 12710] gi|297256359|gb|ADI32568.1| DNA topoisomerase VI, B subunit [Staphylothermus hellenicus DSM 12710] Length = 531 Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 13/66 (19%) Query: 22 RPSIA----IKELIENSLDA-ESS----RVETVIAGGGK----SFFQITDNGFGMTSEEI 68 P+ A ++EL+EN+LDA ++ ++ I + + DNG G+ + Sbjct: 31 NPARALYQTVRELVENALDATDAHGILPNIKITIEKADQVHEYYKITVEDNGIGIPPHIV 90 Query: 69 PMAVQR 74 P A R Sbjct: 91 PKAFGR 96 >gi|325831500|ref|ZP_08164754.1| hypothetical protein HMPREF9404_5157 [Eggerthella sp. HGA1] gi|325486754|gb|EGC89202.1| hypothetical protein HMPREF9404_5157 [Eggerthella sp. HGA1] Length = 361 Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 13/95 (13%) Query: 11 INQIAAGEIIERPSIAIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 + I + E + E++ N+ DA + + + G + + D+G G+ + Sbjct: 43 AHDIRSTE------DIVIEMLRNARDAHAKSIFLAVSREGQRRRLVMIDDGDGVPAAMHE 96 Query: 70 MAVQRHCTSKISD---DFSNIHTFGFRGEALPSIG 101 + TSK+ D IH G RG AL SI Sbjct: 97 RIFEPRVTSKLDSMHMDKWGIH--G-RGMALYSIA 128 >gi|311896960|dbj|BAJ29368.1| putative two-component system sensor kinase [Kitasatospora setae KM-6054] Length = 754 Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 10/100 (10%) Query: 29 ELIENSLDAESSRVETVIAGG---GKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFS 85 EL++N+ DA++S V G G+ ++ DNG GM+ + + TS Sbjct: 34 ELVKNAYDADASLVLIRFIGPLVEGQGAIEVWDNGHGMSPDTVRGTWLEIATS-FRQRAP 92 Query: 86 NIHTFGFR-----GEALPSIGAVSHLT-LMSRPPQNNTGA 119 + G R G S ++ +T L +R + Sbjct: 93 RSESLGRRVLGAKGIGRFSAARLASVTELTTRRVDGSETT 132 >gi|257791367|ref|YP_003181973.1| hypothetical protein Elen_1616 [Eggerthella lenta DSM 2243] gi|257475264|gb|ACV55584.1| hypothetical protein Elen_1616 [Eggerthella lenta DSM 2243] Length = 361 Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 13/95 (13%) Query: 11 INQIAAGEIIERPSIAIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 + I + E + E++ N+ DA + + + G + + D+G G+ + Sbjct: 43 AHDIRSTE------DIVIEMLRNARDAHAKSIFLAVSREGQRRRLVMIDDGDGVPAAMHE 96 Query: 70 MAVQRHCTSKISD---DFSNIHTFGFRGEALPSIG 101 + TSK+ D IH G RG AL SI Sbjct: 97 RIFEPRVTSKLDSMHMDKWGIH--G-RGMALYSIA 128 >gi|21673490|ref|NP_661555.1| sensor histidine kinase [Chlorobium tepidum TLS] gi|21646596|gb|AAM71897.1| sensor histidine kinase [Chlorobium tepidum TLS] Length = 399 Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 15/96 (15%) Query: 26 AIKELIENSL---DAESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 ++ LI+N++ DAES RV G S ++ DNG G+ ++ +R Sbjct: 293 VVRNLIDNAIKYVDAESGRVRVSAYATGDSVSIEVADNGIGIPQADLDRIFERFY----R 348 Query: 82 DDFSNIHTFGFRGEALPSI------GAVSHLTLMSR 111 D + G G L SI + + SR Sbjct: 349 VDKARSRELGGTGLGL-SIVKHIVLAHKGKVEVRSR 383 >gi|326779118|ref|ZP_08238383.1| ATP-binding region ATPase domain protein [Streptomyces cf. griseus XylebKG-1] gi|326659451|gb|EGE44297.1| ATP-binding region ATPase domain protein [Streptomyces cf. griseus XylebKG-1] Length = 509 Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 29/128 (22%) Query: 4 RKLSEKIINQIAAGEIIERPS-------IAIKELIENSLDAESSRVETVIAGGGKSFF-- 54 ++L A +E + A+ +L++NS+DA + V + Sbjct: 20 KRLPP-------AARYVESLTHQGYGFEAAVADLVDNSIDAGARNVVISFLRDDQRLVGL 72 Query: 55 QITDNGFGMTSEEIPMA---VQRHCTSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTLM 109 + D+G GM E + A R + G G L S+ LT++ Sbjct: 73 LVVDDGSGMNDETLDTAMTVGGR--------QEYGDGSLGHFGAGLKAASLSHADSLTVI 124 Query: 110 SRPPQNNT 117 SR ++ + Sbjct: 125 SRTKRSPS 132 >gi|182438472|ref|YP_001826191.1| hypothetical protein SGR_4679 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466988|dbj|BAG21508.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 509 Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 29/128 (22%) Query: 4 RKLSEKIINQIAAGEIIERPS-------IAIKELIENSLDAESSRVETVIAGGGKSFF-- 54 ++L A +E + A+ +L++NS+DA + V + Sbjct: 20 KRLPP-------AARYVESLTHQGYGFEAAVADLVDNSIDAGARNVVISFLRDDQRLVGL 72 Query: 55 QITDNGFGMTSEEIPMA---VQRHCTSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTLM 109 + D+G GM E + A R + G G L S+ LT++ Sbjct: 73 LVVDDGSGMNDETLDTAMTVGGR--------QEYGDGSLGHFGAGLKAASLSHADSLTVI 124 Query: 110 SRPPQNNT 117 SR ++ + Sbjct: 125 SRTKRSPS 132 >gi|302809914|ref|XP_002986649.1| hypothetical protein SELMODRAFT_6462 [Selaginella moellendorffii] gi|300145537|gb|EFJ12212.1| hypothetical protein SELMODRAFT_6462 [Selaginella moellendorffii] Length = 131 Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 8/77 (10%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQIT--------DNGFGMTSEEIPMAVQR 74 A+ ELI+N+ DA + R+E I G +++ D+G GMT ++I V Sbjct: 20 LFGAVAELIDNACDAGAKRLEISIQKGTLKSPEVSEVPMLCFLDDGLGMTHKDIVKMVSF 79 Query: 75 HCTSKISDDFSNIHTFG 91 DD I FG Sbjct: 80 GHKKPEQDDPEQIGRFG 96 >gi|326385178|ref|ZP_08206845.1| DNA mismatch repair enzyme ( ATPase) [Gordonia neofelifaecis NRRL B-59395] gi|326196082|gb|EGD53289.1| DNA mismatch repair enzyme ( ATPase) [Gordonia neofelifaecis NRRL B-59395] Length = 500 Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 11/70 (15%) Query: 7 SEKIINQIA----AGEII-----ERPSIAIKELIENSLDAESSRVETVI--AGGGKSFFQ 55 S ++ +I AG + AI +L++NS+DA +SRV + + + + Sbjct: 4 SNDVVERIKLAPDAGLVKSLGANHTLESAIADLVDNSIDAGASRVSIRLLTSDDRLTQVE 63 Query: 56 ITDNGFGMTS 65 + DNG GM + Sbjct: 64 VLDNGRGMDA 73 >gi|149917108|ref|ZP_01905608.1| chaperone protein HtpG [Plesiocystis pacifica SIR-1] gi|149822024|gb|EDM81417.1| chaperone protein HtpG [Plesiocystis pacifica SIR-1] Length = 584 Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 24/111 (21%) Query: 8 EKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA----------GGGKSFFQIT 57 + +++Q P ++ELI+N++DA SS ++ I G +I Sbjct: 21 DNLVHQ------FSDPWSFLRELIQNAIDAGSSEIDVHIEHQPPDDPSGDDPGLMVIEIV 74 Query: 58 DNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTL 108 D G GM + I + R +S D++ I FG IG VS + Sbjct: 75 DTGEGMDRDIIDTRLTRLFSSAKDGDYTKIGRFG--------IGFVSVFAI 117 >gi|15897847|ref|NP_342452.1| DNA topoisomerase VI subunit B [Sulfolobus solfataricus P2] gi|284175656|ref|ZP_06389625.1| DNA topoisomerase VI subunit B [Sulfolobus solfataricus 98/2] gi|21264094|sp|Q97ZF0|TOP6B_SULSO RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|13814150|gb|AAK41242.1| DNA topoisomerase VI subunit B (top6B) [Sulfolobus solfataricus P2] gi|261602555|gb|ACX92158.1| DNA topoisomerase VI, B subunit [Sulfolobus solfataricus 98/2] Length = 530 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 18/74 (24%) Query: 22 RPSIA----IKELIENSLDAESS---------RVETVIAGGGKS--FFQITDNGFGMTSE 66 P+ A ++ELIENSLDA + ++ + + + DNG G+ + Sbjct: 27 NPARALYQTVRELIENSLDA--TDVHGILPNIKITIDLIDESRQIYKVNVVDNGIGIPPQ 84 Query: 67 EIPMAVQR-HCTSK 79 E+P A R +SK Sbjct: 85 EVPNAFGRVLYSSK 98 >gi|309790031|ref|ZP_07684605.1| Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Oscillochloris trichoides DG6] gi|308227886|gb|EFO81540.1| Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Oscillochloris trichoides DG6] Length = 738 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 3/44 (6%) Query: 29 ELIENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIP 69 EL++N DA++++V+ VI G + ++ DNG GM+ ++I Sbjct: 33 ELVKNGYDADATQVDIVILGLSTTESTRIEVRDNGSGMSRDDIE 76 >gi|256081173|ref|XP_002576847.1| microrchidia 2a [Schistosoma mansoni] gi|238662133|emb|CAZ33084.1| microrchidia 2a, putative [Schistosoma mansoni] Length = 847 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Query: 23 PSIAIKELIENSLDAESSRVET-VIAGG---GKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 AI ELI+N+ DA ++ ++ I G DNG GMT +++ + + Sbjct: 27 LFGAIAELIDNARDAGATELDIYTIKDSSVRGNFLLCFADNGCGMTPDDVKNVIIFGKSL 86 Query: 79 KISDDFSNIHTFG 91 K +D + I +G Sbjct: 87 KKCEDTAAIGMYG 99 >gi|256081169|ref|XP_002576845.1| Microrchidia 2a [Schistosoma mansoni] gi|238662131|emb|CAZ33082.1| putative Microrchidia 2a [Schistosoma mansoni] Length = 866 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Query: 23 PSIAIKELIENSLDAESSRVET-VIAGG---GKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 AI ELI+N+ DA ++ ++ I G DNG GMT +++ + + Sbjct: 27 LFGAIAELIDNARDAGATELDIYTIKDSSVRGNFLLCFADNGCGMTPDDVKNVIIFGKSL 86 Query: 79 KISDDFSNIHTFG 91 K +D + I +G Sbjct: 87 KKCEDTAAIGMYG 99 >gi|256081167|ref|XP_002576844.1| hypothetical protein [Schistosoma mansoni] gi|238662130|emb|CAZ33081.1| expressed protein [Schistosoma mansoni] Length = 906 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Query: 23 PSIAIKELIENSLDAESSRVET-VIAGG---GKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 AI ELI+N+ DA ++ ++ I G DNG GMT +++ + + Sbjct: 27 LFGAIAELIDNARDAGATELDIYTIKDSSVRGNFLLCFADNGCGMTPDDVKNVIIFGKSL 86 Query: 79 KISDDFSNIHTFG 91 K +D + I +G Sbjct: 87 KKCEDTAAIGMYG 99 >gi|71042167|pdb|1Z59|A Chain A, Topoisomerase Vi-B, Adp-Bound Monomer Form gi|71042172|pdb|1Z5C|A Chain A, Topoisomerase Vi-B, Adp Pi Bound Dimer Form gi|71042173|pdb|1Z5C|B Chain B, Topoisomerase Vi-B, Adp Pi Bound Dimer Form Length = 469 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 18/74 (24%) Query: 22 RPSIA----IKELIENSLDAESS---------RVETVIAGGGKS--FFQITDNGFGMTSE 66 P+ A ++ELIENSLDA + ++ + + + DNG G+ + Sbjct: 26 NPARALYQTVRELIENSLDA--TDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQ 83 Query: 67 EIPMAVQR-HCTSK 79 E+P A R +SK Sbjct: 84 EVPNAFGRVLYSSK 97 >gi|71042168|pdb|1Z5A|A Chain A, Topoisomerase Vi-B, Adp-Bound Dimer Form gi|71042169|pdb|1Z5A|B Chain B, Topoisomerase Vi-B, Adp-Bound Dimer Form gi|71042170|pdb|1Z5B|A Chain A, Topoisomerase Vi-B, Adp Alf4- Bound Dimer Form gi|71042171|pdb|1Z5B|B Chain B, Topoisomerase Vi-B, Adp Alf4- Bound Dimer Form gi|114794402|pdb|2HKJ|A Chain A, Topoisomerase Vi-B Bound To Radicicol Length = 469 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 18/74 (24%) Query: 22 RPSIA----IKELIENSLDAESS---------RVETVIAGGGKS--FFQITDNGFGMTSE 66 P+ A ++ELIENSLDA + ++ + + + DNG G+ + Sbjct: 26 NPARALYQTVRELIENSLDA--TDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQ 83 Query: 67 EIPMAVQR-HCTSK 79 E+P A R +SK Sbjct: 84 EVPNAFGRVLYSSK 97 >gi|3024756|sp|O05207|TOP6B_SULSH RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|167745001|pdb|2ZBK|B Chain B, Crystal Structure Of An Intact Type Ii Dna Topoisomerase: Insights Into Dna Transfer Mechanisms gi|167745003|pdb|2ZBK|D Chain D, Crystal Structure Of An Intact Type Ii Dna Topoisomerase: Insights Into Dna Transfer Mechanisms gi|167745005|pdb|2ZBK|F Chain F, Crystal Structure Of An Intact Type Ii Dna Topoisomerase: Insights Into Dna Transfer Mechanisms gi|167745007|pdb|2ZBK|H Chain H, Crystal Structure Of An Intact Type Ii Dna Topoisomerase: Insights Into Dna Transfer Mechanisms gi|1926403|emb|CAA71604.1| type II DNA topoisomerase subunit B [Sulfolobus shibatae B12] Length = 530 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 18/74 (24%) Query: 22 RPSIA----IKELIENSLDAESS---------RVETVIAGGGKS--FFQITDNGFGMTSE 66 P+ A ++ELIENSLDA + ++ + + + DNG G+ + Sbjct: 27 NPARALYQTVRELIENSLDA--TDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQ 84 Query: 67 EIPMAVQR-HCTSK 79 E+P A R +SK Sbjct: 85 EVPNAFGRVLYSSK 98 >gi|28373805|pdb|1MX0|A Chain A, Structure Of Topoisomerase Subunit gi|28373806|pdb|1MX0|B Chain B, Structure Of Topoisomerase Subunit gi|28373807|pdb|1MX0|C Chain C, Structure Of Topoisomerase Subunit gi|28373808|pdb|1MX0|D Chain D, Structure Of Topoisomerase Subunit gi|28373809|pdb|1MX0|E Chain E, Structure Of Topoisomerase Subunit gi|28373810|pdb|1MX0|F Chain F, Structure Of Topoisomerase Subunit Length = 472 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 18/74 (24%) Query: 22 RPSIA----IKELIENSLDAESS---------RVETVIAGGGKS--FFQITDNGFGMTSE 66 P+ A ++ELIENSLDA + ++ + + + DNG G+ + Sbjct: 29 NPARALYQTVRELIENSLDA--TDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQ 86 Query: 67 EIPMAVQR-HCTSK 79 E+P A R +SK Sbjct: 87 EVPNAFGRVLYSSK 100 >gi|28373795|pdb|1MU5|A Chain A, Structure Of Topoisomerase Subunit Length = 471 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 18/74 (24%) Query: 22 RPSIA----IKELIENSLDAESS---------RVETVIAGGGKS--FFQITDNGFGMTSE 66 P+ A ++ELIENSLDA + ++ + + + DNG G+ + Sbjct: 28 NPARALYQTVRELIENSLDA--TDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQ 85 Query: 67 EIPMAVQR-HCTSK 79 E+P A R +SK Sbjct: 86 EVPNAFGRVLYSSK 99 >gi|308469097|ref|XP_003096788.1| hypothetical protein CRE_23689 [Caenorhabditis remanei] gi|308241479|gb|EFO85431.1| hypothetical protein CRE_23689 [Caenorhabditis remanei] Length = 409 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 7/59 (11%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAGG--GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 P A+ E ++NS DA + V+ + GKS +I D+G GM +E RH T Sbjct: 26 THPFTALTEFVDNSYDAGARHVDVSLTKYKPGKSRLEILDDGKGMDLDEA-----RHLT 79 >gi|256081171|ref|XP_002576846.1| hypothetical protein [Schistosoma mansoni] gi|238662132|emb|CAZ33083.1| expressed protein [Schistosoma mansoni] Length = 887 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Query: 23 PSIAIKELIENSLDAESSRVET-VIAGG---GKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 AI ELI+N+ DA ++ ++ I G DNG GMT +++ + + Sbjct: 27 LFGAIAELIDNARDAGATELDIYTIKDSSVRGNFLLCFADNGCGMTPDDVKNVIIFGKSL 86 Query: 79 KISDDFSNIHTFG 91 K +D + I +G Sbjct: 87 KKCEDTAAIGMYG 99 >gi|313887012|ref|ZP_07820712.1| conserved hypothetical protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923538|gb|EFR34347.1| conserved hypothetical protein [Porphyromonas asaccharolytica PR426713P-I] Length = 656 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 23/129 (17%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEI----PMAVQRHCTSKIS 81 + E++ NS DA++++V I G I D+G GM+ +I R Sbjct: 27 VLSEVVANSYDADATKVNISIYKGDDPVITILDDGKGMSLSDINDKYLKVGYR------K 80 Query: 82 DDF-SNIHT------FGFRGE---ALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSV 131 D ++ + G +G +L SI + + ++ + G I +K+ V Sbjct: 81 RDLGEHLSSHFKRPVMGRKGIGKLSLFSIAN--RIEVHTKRKDED-GEAFVIERDKLEQV 137 Query: 132 RPVAMNPGT 140 + + Sbjct: 138 IRAGASTFS 146 >gi|328946816|gb|EGG40953.1| hypothetical protein HMPREF9397_0017 [Streptococcus sanguinis SK1087] Length = 266 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 18/107 (16%) Query: 25 IAIKELIENSLDAESSRVETVIA--GGGKSFFQITDNGFGMTSEEIPM---AVQRHCTSK 79 AI ELI N LDA ++ V+ I S +I DNG GM+ E++ + R+ + Sbjct: 29 TAISELIANGLDAGATNVKLYIESIDKENSILEILDNGSGMSYEDLSTKYALIGRNR--R 86 Query: 80 ISDDFSNIHTFGFRGEALPSIGAVSHL------TLMSRPPQNNTGAQ 120 IS++ + T G +G IG ++ L ++S+ T Sbjct: 87 ISNEEFSEKTKGRKG-----IGKLATLFLSKKYYIVSKKGGTETAWM 128 >gi|229582219|ref|YP_002840618.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus Y.N.15.51] gi|259534001|sp|C3NHT6|TOP6B_SULIN RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|228012935|gb|ACP48696.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus Y.N.15.51] Length = 530 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 18/77 (23%) Query: 22 RPSIA----IKELIENSLDAESS---------RVETVIAGGGKS--FFQITDNGFGMTSE 66 P+ A ++ELIENSLDA + ++ + + + DNG G+ + Sbjct: 27 NPARALYQTVRELIENSLDA--TDVHGILPNIKITIDLIDEARQIYKVNVVDNGIGIPPQ 84 Query: 67 EIPMAVQR-HCTSKISD 82 E+P A R +SK ++ Sbjct: 85 EVPNAFGRVLYSSKYAN 101 >gi|260221507|emb|CBA30140.1| hypothetical protein Csp_C22060 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 757 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 62/174 (35%), Gaps = 37/174 (21%) Query: 26 AIKELIENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCT-SKISDD 83 A+ EL++NS DA++ V + + D+G GM+++ I A + T SK + D Sbjct: 63 AVFELVKNSYDADARTVTVTLDLLAPVPKISVRDDGIGMSADTIENAWLQVGTDSKRNAD 122 Query: 84 FSNIHTFGFR---GEALPSIGAVSHL---------TLMSRPPQNNT-------------- 117 G R GE V L L++R Sbjct: 123 ARRRSPLG-RFPLGE-----KGVGRLAVQKLGDTIRLVTRQQGQPEHSFKISWGALIDSA 176 Query: 118 ---GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLI 168 G + + + S GT+VE+ DL T +R ++ T+L Sbjct: 177 RYLGDGLEVQVAEHPSPEEFTSKSGTLVEITDLHHTDWSRREIRDLYRLVTSLC 230 >gi|123441987|ref|YP_001005970.1| putative prophage encoded two-component system histidine kinase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122088948|emb|CAL11758.1| putative prophage encoded two-component system histidine kinase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 792 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 EL++N +DA + ++ + K + DNG GM+ ++ Sbjct: 35 ELVKNGIDANAENIKVTFSE-KKKSIIVFDNGHGMSLSDLE 74 >gi|118576809|ref|YP_876552.1| signal transduction histidine kinase [Cenarchaeum symbiosum A] gi|118195330|gb|ABK78248.1| signal transduction histidine kinase [Cenarchaeum symbiosum A] Length = 718 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Query: 29 ELIENSLDAESSRVETVIAG--GGKSFFQITDNGFGMTSEEIP 69 ELI+NS DA + V G + +I+D+G GM++E+I Sbjct: 18 ELIKNSRDANAKNVLIKFKNLRYGSTEIEISDDGDGMSNEDIE 60 >gi|307354299|ref|YP_003895350.1| ATP-binding region ATPase domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307157532|gb|ADN36912.1| ATP-binding region ATPase domain protein [Methanoplanus petrolearius DSM 11571] Length = 501 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 59/193 (30%), Gaps = 23/193 (11%) Query: 31 IENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHT 89 I+NS+ A++ ++ G KS I DNG GMT E+ +++ SK D + Sbjct: 38 IDNSIVADADDIQIQFTWLGEKSKISIIDNGCGMTEAELINSMKPG--SKNPLDERDPKD 95 Query: 90 FGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMN---------- 137 G G L S +T+ S+ NN + I+ + + Sbjct: 96 LGRFGLGLKTASFSQCRRVTVGSKAEGNNI-VIRRWDLDYINQCKEWRLQRIDPKEDNIF 154 Query: 138 -------PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 GTIV + + + + D ++ Sbjct: 155 SALDSMGHGTIVLWEQMDRLVKGADKDDRKRENLFYKHIDKVKSHLSMVFHRFLEKQNSV 214 Query: 191 SNRYKMNFQSTNG 203 + + S Sbjct: 215 KIQINNHPISPWD 227 >gi|302343991|ref|YP_003808520.1| ATP-binding region ATPase domain protein [Desulfarculus baarsii DSM 2075] gi|301640604|gb|ADK85926.1| ATP-binding region ATPase domain protein [Desulfarculus baarsii DSM 2075] Length = 662 Score = 55.4 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 18/185 (9%) Query: 24 SIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 + + E + N+ DA++ VE I GK F +I D+G GM+ E++ R + +D Sbjct: 37 AAVLTEAVANAWDADAENVEIGIDPDGK-FIEIKDDGIGMSIEDMNTKYLRVGYRRRDED 95 Query: 84 FSNIHT-------FGFRG---EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRP 133 T G +G +L SI + + S + G ++ I G S Sbjct: 96 QETGRTTAKGRPVMGRKGLGKLSLFSIAN--TIEVHSAKNGESHGLRMTIDGIHKSVQDK 153 Query: 134 VAMNP-----GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFST 188 ++V + + + + + T L + RR ++ F Sbjct: 154 EPFYSPEKLPREEIQVTNGTAILLKDIKRQRLGRGATALRKRLARRFSVVGEAHGFKILI 213 Query: 189 IKSNR 193 Sbjct: 214 NGHPI 218 >gi|262197231|ref|YP_003268440.1| histidine kinase [Haliangium ochraceum DSM 14365] gi|262080578|gb|ACY16547.1| histidine kinase [Haliangium ochraceum DSM 14365] Length = 773 Score = 55.4 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 20 IERPSIAIKELIENSLDAESSRVET---VIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 + R S A+ ELI+N+ DA+++ ++ + + +I DNG GMT + R Sbjct: 23 VGRDSTALIELIKNAYDADATNIKVVADKLDEPDSGYIEIIDNGLGMTRAQFERGFLR 80 >gi|330862097|emb|CBX72263.1| hypothetical protein YEW_EM19530 [Yersinia enterocolitica W22703] Length = 279 Score = 55.4 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 85/247 (34%), Gaps = 21/247 (8%) Query: 333 TSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSED 392 +S + S ++ P H+ + + +Q ++ + + Sbjct: 23 SSPERTVATERSIARERTPTYHVGEPYQKQQGELYRQLVQPAVVNKPAAVSQPSAASAPV 82 Query: 393 NDPVEESEA---THYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNS 449 + E +Y G Y + + G+ +++ A L ++ + Sbjct: 83 ARQISTDEPLQGDNYSFGRVLTVFPSCYALIEYKQGIALLELTVAERWLKQAQLNPP--A 140 Query: 450 TKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNI 509 + Q LL P + L + E H + L +GI+ A +R + L ++N+ Sbjct: 141 EGLRPQPLLIPLKLTLDKNEATACQRHQKLLVTMGIELAVEHARA-TLRAVSLPLRQQNL 199 Query: 510 PQLLRDIIDEIIDSSTTYTLQDRIENILAT-MACY-GSIRSGRKMQSIEMNRLLREMEKN 567 +L+ +++ + + LAT ++ + GS + +LL ++E+ Sbjct: 200 QKLIPELLGYLSQHEEISP------DALATWISRHLGS--EHEVWNVSQAIQLLTDVERL 251 Query: 568 PNSSQCN 574 C Sbjct: 252 -----CP 253 >gi|309791890|ref|ZP_07686373.1| DNA gyrase, B subunit [Oscillochloris trichoides DG6] gi|308226062|gb|EFO79807.1| DNA gyrase, B subunit [Oscillochloris trichoides DG6] Length = 636 Score = 55.4 bits (132), Expect = 3e-05, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 76/256 (29%), Gaps = 34/256 (13%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM----- 70 I IKE+++NS+D A + + I G Q+TDNG G+ + P Sbjct: 35 INGLHHMIKEVVDNSVDEALAGYADTITITIFADG--SVQVTDNGRGIPVDIHPKHQVSA 92 Query: 71 ----AVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGE 126 A + H K D + + G G L + A+S A++ + Sbjct: 93 LQLAATELHAGGKFGDGGYKVSS-GLHGVGLSVVNALS----------EWMRAEVRRHDK 141 Query: 127 KISSVRPVAMNPGTIVEVRDL------FFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 G +V V + +P F + ++ +R MA Sbjct: 142 LWLQEYRTGKPQGPVVAVGEAEGTGTSIHFMPDVTIFKDGIDYQFRVVAQRLREMAYLTK 201 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + F F G + + + + + + + Sbjct: 202 GLRFKF--EDQRTQNEVSFYFEGGIISYVRHLNKAKGALHRLPFYVERTVGEVAVEVAMQ 259 Query: 241 TFNRGNANQFYVFING 256 + + + Y F N Sbjct: 260 YTDTYDTDSIYAFANN 275 >gi|47226532|emb|CAG08548.1| unnamed protein product [Tetraodon nigroviridis] Length = 952 Score = 55.4 bits (132), Expect = 3e-05, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++NS DA ++R++ GG + D+G GM + +Q +SK S + Sbjct: 12 ELVDNSRDANATRIDIYTEKRPELRGGYMLCFL-DDGIGMDPNDATHVIQFGKSSKRSPE 70 Query: 84 FSNIHTFG 91 + I +G Sbjct: 71 STQIGQYG 78 >gi|330948608|gb|EGH48868.1| DNA mismatch repair protein [Pseudomonas syringae pv. pisi str. 1704B] Length = 73 Score = 55.4 bits (132), Expect = 3e-05, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 39/66 (59%) Query: 132 RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKS 191 +P A GT VEVRDLFF PAR FLK+E+ E + + +VI+RMA+A V+F Sbjct: 1 QPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRMALARFDVAFHLRHNGK 60 Query: 192 NRYKMN 197 ++ Sbjct: 61 TVLSLH 66 >gi|116751270|ref|YP_847957.1| hypothetical protein Sfum_3853 [Syntrophobacter fumaroxidans MPOB] gi|116700334|gb|ABK19522.1| hypothetical protein Sfum_3853 [Syntrophobacter fumaroxidans MPOB] Length = 662 Score = 55.4 bits (132), Expect = 3e-05, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 18/185 (9%) Query: 24 SIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 + + E + N+ DA++ VE I GK F +I D+G GM+ E++ R + +D Sbjct: 37 AAVLTEAVANAWDADAENVEIGIDPDGK-FIEIKDDGIGMSIEDMNTKYLRVGYRRRDED 95 Query: 84 FSNIHT-------FGFRG---EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRP 133 T G +G +L SI + + S + G ++ I G S Sbjct: 96 QETGRTTAKGRPVMGRKGLGKLSLFSIAN--TIEVHSAKNGESHGLRMTIDGIHKSVQDK 153 Query: 134 VAMNP-----GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFST 188 ++V + + + + + T L + RR ++ F Sbjct: 154 EPFYSPEKLPREEIQVTNGTAILLKDIKRQRLGRGATALRKRLARRFSVVGEAHGFKILI 213 Query: 189 IKSNR 193 Sbjct: 214 DGHPI 218 >gi|223983415|ref|ZP_03633601.1| hypothetical protein HOLDEFILI_00881 [Holdemania filiformis DSM 12042] gi|223964587|gb|EEF68913.1| hypothetical protein HOLDEFILI_00881 [Holdemania filiformis DSM 12042] Length = 345 Score = 55.4 bits (132), Expect = 3e-05, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 6/66 (9%) Query: 30 LIENSLD---AESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFS 85 L++N+LD A R+ + DNG G+ E++ +R S+ S D Sbjct: 245 LLKNALDHTQAG-DRITVQWKSRAPLVQLVVQDNGCGIHPEDLHHIFKRFYRSRFSKDTQ 303 Query: 86 NIHTFG 91 I G Sbjct: 304 GIG-LG 308 >gi|291279836|ref|YP_003496671.1| hypothetical protein DEFDS_1455 [Deferribacter desulfuricans SSM1] gi|290754538|dbj|BAI80915.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 460 Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQ-ITDNGFGMTSEEIPMAVQRHCTSK 79 E+ + LI NSLDA + ++E I + I DNG G+ E T+K Sbjct: 357 EKLLQVLLNLINNSLDAGADKIEINIFNISEDVIIDIIDNGTGINEEAKDKIFMPFFTTK 416 >gi|163848553|ref|YP_001636597.1| DNA gyrase subunit B [Chloroflexus aurantiacus J-10-fl] gi|222526487|ref|YP_002570958.1| DNA gyrase subunit B [Chloroflexus sp. Y-400-fl] gi|163669842|gb|ABY36208.1| DNA gyrase, B subunit [Chloroflexus aurantiacus J-10-fl] gi|222450366|gb|ACM54632.1| DNA gyrase, B subunit [Chloroflexus sp. Y-400-fl] Length = 636 Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 81/261 (31%), Gaps = 45/261 (17%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE---- 67 I ++E+++NS+D A ++ V I G ++D+G G+ +E Sbjct: 36 INGLHTMVREVVDNSVDEVMAGRATSVSVTIHRDG--SVTVSDDGSGIPVGIHPKEGIST 93 Query: 68 IPMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGE 126 + + + R H K + + G G + ++ A+S + + Sbjct: 94 LTLVMTRLHAGGKFGSGGYKVSS-GLHGVGVSAVNALS----------------AYMRVD 136 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQ-----------VETNLITDVIRRM 175 + R V V D+ P + + + + R M Sbjct: 137 VYRNGRHYYQEYRAGVPVTDVIDLEPTDRHGTTTRFLPDTSIIQTLDYNFDTLAQRFREM 196 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 + + F F + ++NF G + + E + + + + Sbjct: 197 SYLNKGLRFKF-VDERTNRELNFYFEGG-IVSYVRHLNKEKTVLHRQPFYVERIVDDVMV 254 Query: 236 YTGIPTFNRGNANQFYVFING 256 + + + + Y F N Sbjct: 255 EVALQYTDSFDTDNVYTFANN 275 >gi|257470288|ref|ZP_05634379.1| histidine kinase [Fusobacterium ulcerans ATCC 49185] gi|317064499|ref|ZP_07928984.1| signal transduction histidine kinase [Fusobacterium ulcerans ATCC 49185] gi|313690175|gb|EFS27010.1| signal transduction histidine kinase [Fusobacterium ulcerans ATCC 49185] Length = 718 Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 63/172 (36%), Gaps = 26/172 (15%) Query: 25 IAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC--TSKISD 82 AI EL++NS DA +S ++ + + DNG GM ++I H +SK ++ Sbjct: 27 SAILELVKNSFDAGASELKIIFKE---DQLILEDNGKGMNEDDIRNKWM-HVGKSSKENE 82 Query: 83 ----DF---SNIHTFGFRG---EALPSIGAVSHLTLMS-RPPQNNTGAQIAISGEKISSV 131 D I++ G +G AL +G + L+S + + + ++ Sbjct: 83 YSFYDIEGNERIYS-GSKGIGRFALARLGK--RVKLISNKLKDYKVIWETDWNNINFNTE 139 Query: 132 RPVAMNPGTIVEVRDLFFTIPA------RLNFLKSEQVETNLITDVIRRMAI 177 + + T + + +L + ++ + I R Sbjct: 140 DIITKDSKTKIIISELRDRWNEGSIENLKKYLSRTTRNSKMKIYIEFREKVY 191 >gi|289805763|ref|ZP_06536392.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 226 Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 72/225 (32%), Gaps = 30/225 (13%) Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMIS------- 343 DP QVDVNVHPAK +RF ++ +FI Q + + ++ +T + Sbjct: 1 DPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETTLPLEEIAPAPRHVPENR 60 Query: 344 ----------SFHQDNAPKTHLPKYATSLTN-----------TQEKLFLQENRLSTNDLL 382 A + P+Y+ + + Q+ + L Sbjct: 61 IAAGRNHFAVPAEPTAAREPATPRYSDGASGGNGGRQSAGGWPHAQPGYQKQQGEVYRTL 120 Query: 383 PSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEK 442 T + G + + + + + ++ A L + Sbjct: 121 LQTPTTSPAPEPVAPALDGHSQSFGRVLTIVGGDCALLEHAGTIQLLSLPVAERWLRQAQ 180 Query: 443 MRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKA 487 + + + +Q LL P + + E A + + L LGI+ Sbjct: 181 L--TPGQSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEF 223 >gi|110834689|ref|YP_693548.1| hypothetical protein ABO_1828 [Alcanivorax borkumensis SK2] gi|110647800|emb|CAL17276.1| hypothetical protein ABO_1828 [Alcanivorax borkumensis SK2] Length = 581 Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 22 RPSIAIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 P A+KEL++N+ DAE+ RV + + D+G GMT E+ Sbjct: 22 SPEKALKELVDNAWDAEALRVSITLPEPMSGDAIIVEDDGAGMTLNELQ 70 >gi|315442524|ref|YP_004075403.1| DNA mismatch repair enzyme ( ATPase) [Mycobacterium sp. Spyr1] gi|315260827|gb|ADT97568.1| DNA mismatch repair enzyme (predicted ATPase) [Mycobacterium sp. Spyr1] Length = 504 Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 18/146 (12%) Query: 2 KIRKLSEK--IINQIAAGEIIERPSIAIKELIENSLDAESSRVET--VIAGGGKSFFQIT 57 +I L ++ + A A+ +L++NS+DA+++RV I + I Sbjct: 13 RI-VLPPDPGLVKSLGAH---HSLPTAVADLVDNSVDAKATRVLIVFEIENQSATGLTIV 68 Query: 58 DNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSH---LTLMSRP-P 113 DNG GM ++ A++ K DD G G L + A SH LT+ +RP Sbjct: 69 DNGRGMNEKQADNAMRLGRQRKYEDDAQ-----GHFGIGLKA-AAFSHADTLTVYTRPGS 122 Query: 114 QNNTGAQIAISGEKISSVRPVAMNPG 139 + G ++ + + Sbjct: 123 GSFHGRRLRKKDVQRDYSCEILHPEA 148 >gi|270158284|ref|ZP_06186941.1| hypothetical protein LLB_1758 [Legionella longbeachae D-4968] gi|289163461|ref|YP_003453599.1| hypothetical protein LLO_0118 [Legionella longbeachae NSW150] gi|269990309|gb|EEZ96563.1| hypothetical protein LLB_1758 [Legionella longbeachae D-4968] gi|288856634|emb|CBJ10445.1| hypothetical protein LLO_0118 [Legionella longbeachae NSW150] Length = 240 Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 40/208 (19%) Query: 15 AAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSE-------E 67 AA ++ + EL++N+LDA+++ + G + ++ D+G G + E Sbjct: 46 AAHHVV--LVS-LSELLKNALDADANTLFIEDESSGNASIRVFDDGSGFSPEFLGKDTTH 102 Query: 68 IPMAVQRHCTSKISDDFSNIHTFGFRGEALP-----------SIGAVSHLTLMSRPPQNN 116 + AV+ S I + G G L SI + S N Sbjct: 103 LDYAVKLAGQSAIISEKIGRSKLGGHGRGLAQAHEVIKNYEGSI-------ICSNRSDGN 155 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 GA I + + T V D++ + A L S + + + + Sbjct: 156 HGAHIRFN------------SSITPVLAADIYQSFNAALLAFSSHYCRFDSAEEAEKVVG 203 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGN 204 F + + N+ + + Sbjct: 204 SILDNFRFFATERRKNKNTTPLMAQEQD 231 >gi|92114662|ref|YP_574590.1| DNA topoisomerase IV subunit B [Chromohalobacter salexigens DSM 3043] gi|91797752|gb|ABE59891.1| DNA topoisomerase IV subunit B [Chromohalobacter salexigens DSM 3043] Length = 626 Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 69/199 (34%), Gaps = 23/199 (11%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE--------EI 68 RP+ +E+I+NS+D A +S + + GG +++D+G GM + + Sbjct: 30 RPNHLAQEVIDNSVDEALAGHASHIRVRLHDDGG---IEVSDDGRGMPIDMHPEHGVSGV 86 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S + G G + + A+S L + + G A + Sbjct: 87 ELILTRLHAGGKFSQSSYR-FSGGLHGVGVSVVNALSRRLEIEVCRDGDRHGMAFAHGDK 145 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 + V + ++ S ++ + ++R A+ P + T Sbjct: 146 VEDLTVIGTCSKKAKGTVVRFW----PDESYFDSPRLALPRLKHLLRAKAVLCPGLEVTL 201 Query: 187 STIKSNRYKMNFQSTNGNF 205 + ++ Sbjct: 202 IEADGTESVWQYADGLRDY 220 >gi|193222341|emb|CAL62000.2| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 499 Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Query: 22 RPSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMA 71 A+ ++I+NS+ AE+S ++ + G KSF ++ DNG GM EI +A Sbjct: 23 SLPSALADIIDNSIAAEASEIDVTFVWNGAKSFIRVHDNGTGMDEAEIDLA 73 >gi|333024769|ref|ZP_08452833.1| hypothetical protein STTU_2273 [Streptomyces sp. Tu6071] gi|332744621|gb|EGJ75062.1| hypothetical protein STTU_2273 [Streptomyces sp. Tu6071] Length = 516 Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Query: 30 LIENSLDAESSRVETVIAGGG--KSFFQITDNGFGMTSEEIPMA 71 L++NS+DA + V G + + D+G GMT +E+ +A Sbjct: 48 LVDNSIDAGAHDVVIHFLRDGDRLTSLLVVDDGKGMTEKELDIA 91 >gi|318076179|ref|ZP_07983511.1| hypothetical protein SSA3_05538 [Streptomyces sp. SA3_actF] Length = 516 Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Query: 30 LIENSLDAESSRVETVIAGGG--KSFFQITDNGFGMTSEEIPMA 71 L++NS+DA + V G + + D+G GMT +E+ +A Sbjct: 48 LVDNSIDAGAHDVVIHFLRDGDRLTSLLVVDDGKGMTEKELDIA 91 >gi|318057147|ref|ZP_07975870.1| hypothetical protein SSA3_04365 [Streptomyces sp. SA3_actG] Length = 511 Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Query: 30 LIENSLDAESSRVETVIAGGG--KSFFQITDNGFGMTSEEIPMA 71 L++NS+DA + V G + + D+G GMT +E+ +A Sbjct: 43 LVDNSIDAGAHDVVIHFLRDGDRLTSLLVVDDGKGMTEKELDIA 86 >gi|320101389|ref|YP_004176981.1| DNA topoisomerase VI subunit B [Desulfurococcus mucosus DSM 2162] gi|319753741|gb|ADV65499.1| DNA topoisomerase VI, B subunit [Desulfurococcus mucosus DSM 2162] Length = 529 Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 13/66 (19%) Query: 22 RPSIA----IKELIENSLDA-ESSRV----ETVIAG----GGKSFFQITDNGFGMTSEEI 68 P+ A ++EL+EN+LDA ++ + + I + DNG G+ + + Sbjct: 28 SPARAIYQTVRELVENALDATDAHGILPDVKISIKRVDEIQEFYRITVEDNGIGIPPDVV 87 Query: 69 PMAVQR 74 P A R Sbjct: 88 PDAFGR 93 >gi|311695220|gb|ADP98093.1| two-component sensor [marine bacterium HP15] Length = 412 Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 30 LIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ NSL+A + V + G+ ++ DNG G + + T+K Sbjct: 317 LVNNSLEAGARHVAVRVTEETGELVIRVVDNGPGFEPSDAARLTEAFYTTK 367 >gi|219850524|ref|YP_002464957.1| DNA gyrase subunit B [Chloroflexus aggregans DSM 9485] gi|219544783|gb|ACL26521.1| DNA gyrase, B subunit [Chloroflexus aggregans DSM 9485] Length = 636 Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats. Identities = 35/261 (13%), Positives = 81/261 (31%), Gaps = 45/261 (17%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE---- 67 I ++E+++NS+D A ++ V I G ++D+G G+ +E Sbjct: 36 INGLHTMVREVVDNSVDEVMAGRATSVSVTIHRDG--SVTVSDDGSGIPVGIHPKEGIST 93 Query: 68 IPMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGE 126 + + + R H K + + G G + ++ A+S + + Sbjct: 94 LTLVMTRLHAGGKFGSGGYKVSS-GLHGVGVSAVNALS----------------SYMRVD 136 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQ-----------VETNLITDVIRRM 175 + R V V D+ P + + + + R M Sbjct: 137 VYRNGRHYYQEYRAGVPVTDVIDLEPTDRHGTTTRFLPDTSIIQTLDYNFDTLAQRFREM 196 Query: 176 AIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQG 235 + + F F + ++NF G + + + + + + + Sbjct: 197 SYLNKGLRFKF-VDERTNRELNFYFEGG-IVSYVRHLNKDKVVLHRQPFYVERVVDEVMV 254 Query: 236 YTGIPTFNRGNANQFYVFING 256 + + + + Y F N Sbjct: 255 EVALQYTDTFDTDNVYTFANN 275 >gi|227827528|ref|YP_002829308.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus M.14.25] gi|227830215|ref|YP_002831995.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus L.S.2.15] gi|229579030|ref|YP_002837428.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus Y.G.57.14] gi|229584731|ref|YP_002843233.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus M.16.27] gi|238619685|ref|YP_002914511.1| DNA topoisomerase VI subunit B [Sulfolobus islandicus M.16.4] gi|284997638|ref|YP_003419405.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus L.D.8.5] gi|259533989|sp|C3N5B3|TOP6B_SULIA RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|259533992|sp|C4KGX9|TOP6B_SULIK RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|259533995|sp|C3MPN7|TOP6B_SULIL RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|259533998|sp|C3MYN1|TOP6B_SULIM RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|259534004|sp|C3NDW7|TOP6B_SULIY RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|227456663|gb|ACP35350.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus L.S.2.15] gi|227459324|gb|ACP38010.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus M.14.25] gi|228009744|gb|ACP45506.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus Y.G.57.14] gi|228019781|gb|ACP55188.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus M.16.27] gi|238380755|gb|ACR41843.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus M.16.4] gi|284445533|gb|ADB87035.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus L.D.8.5] gi|323474579|gb|ADX85185.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus REY15A] gi|323477311|gb|ADX82549.1| DNA topoisomerase VI, B subunit [Sulfolobus islandicus HVE10/4] Length = 530 Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 18/74 (24%) Query: 22 RPSIA----IKELIENSLDAESS---------RVETVIAGGGKS--FFQITDNGFGMTSE 66 P+ A ++ELIENSLDA + ++ + + + DNG G+ + Sbjct: 27 NPARALYQTVRELIENSLDA--TDVHGILPNIKITIDLIDEARQIYKVNVVDNGIGIPPQ 84 Query: 67 EIPMAVQR-HCTSK 79 E+P A R +SK Sbjct: 85 EVPNAFGRVLYSSK 98 >gi|326385589|ref|ZP_08207223.1| putative C4-dicarboxylate transport two-component sensor histidine kinase transcriptional regulatory protein [Novosphingobium nitrogenifigens DSM 19370] gi|326209923|gb|EGD60706.1| putative C4-dicarboxylate transport two-component sensor histidine kinase transcriptional regulatory protein [Novosphingobium nitrogenifigens DSM 19370] Length = 590 Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Query: 22 RPSIAIKELIENSLDAESSR----VE-TVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N++DA SSR +E GG+ +I DNG G++ E Sbjct: 487 RLEQVLVNLLHNAIDALSSRPDARIELVATQEGGRVRLRIRDNGPGISPEIAGRLFTPFA 546 Query: 77 TS 78 TS Sbjct: 547 TS 548 >gi|254453821|ref|ZP_05067258.1| ATPase [Octadecabacter antarcticus 238] gi|198268227|gb|EDY92497.1| ATPase [Octadecabacter antarcticus 238] Length = 502 Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 20/115 (17%) Query: 16 AGEIIERP-------SIAIKELIENSLDAESSRVETVIAGG-GKSFFQITDNGFGMTSEE 67 AG +IE + A+ ++I+N++ A +++V + G S+ + DNG GM+ +E Sbjct: 13 AGMLIESLRGLGYTTATALADIIDNAIPAGATQVNVLFHWAEGDSWISVADNGKGMSDDE 72 Query: 68 IPMAVQRHCTS----KISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNN 116 + A+Q ++SDD G G L S LT+ SRP ++ Sbjct: 73 LERAMQLGARDPRDERLSDDL------GRFGMGLKTASFSQARTLTVASRPAKSE 121 >gi|262195363|ref|YP_003266572.1| DNA topoisomerase (ATP-hydrolyzing) [Haliangium ochraceum DSM 14365] gi|262078710|gb|ACY14679.1| DNA topoisomerase (ATP-hydrolyzing) [Haliangium ochraceum DSM 14365] Length = 647 Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 67/209 (32%), Gaps = 38/209 (18%) Query: 29 ELIENSLD----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR---------H 75 E+++NS+D ++RV+ + G + I DNG G+ + +P + H Sbjct: 42 EIVDNSIDEVINKHATRVDVTLHDDG-TRVTIEDNGRGIPIDTLPKYKKPALEIIMTTLH 100 Query: 76 CTSKISDDFSNIHTFGFRG------EALPS--IGAVSHLTLMSRPPQNNTGAQIAIS--G 125 K + H+ G G AL S I V + Q Sbjct: 101 AGGKFERGKNYKHSGGLHGVGASVVNALSSELIAEVKR--------DGDLYQQTYERGVP 152 Query: 126 EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFT 185 + GTI+ P F K ++ + I + + + + V Sbjct: 153 TGKMKKAGSSRGSGTIITF------TPDPQIFGKKQRFDAKHIAERLEAKSYLHRGVKLV 206 Query: 186 FSTIKSNRYKMNFQSTNGNFPERISQVIG 214 S + + E +S+++G Sbjct: 207 LHDKLSKPNATHTYQHDQGIAEYLSKLLG 235 >gi|220906995|ref|YP_002482306.1| histidine kinase [Cyanothece sp. PCC 7425] gi|219863606|gb|ACL43945.1| histidine kinase [Cyanothece sp. PCC 7425] Length = 684 Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 24/114 (21%) Query: 18 EIIERPSIAIKELIENSLDAESSRVETVIAG----GGKSFFQITDNGFGMTSE---EIPM 70 ++I P I EL++NS DA+++ + GG ++DNG GM + + Sbjct: 16 QLIPNPDQGIMELVKNSYDADATECTVKLINTEAIGG--SLVVSDNGIGMDLNAISDGWL 73 Query: 71 AVQRHCTSK----ISDDFSNI----HTFGFRGEALPSIGAVSHLTLMSRPPQNN 116 + R SK + + G L ++ SH+TL +RP + Sbjct: 74 VIGR---SKKAARLPTALGRLPVGDKGLGR----LAALRQGSHVTLKTRPADDP 120 >gi|253571496|ref|ZP_04848902.1| ATPase [Bacteroides sp. 1_1_6] gi|251838704|gb|EES66789.1| ATPase [Bacteroides sp. 1_1_6] Length = 438 Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 43/112 (38%), Gaps = 6/112 (5%) Query: 31 IENSLDAESSRVET-VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHT 89 ++NS+ A ++ + I GG+S I D+G GM +E+ A++ + + + + Sbjct: 39 LDNSISAGANNIWISRIWKGGQSIITIKDDGIGMNHQELIEAMRPGSQNPLEE--RSKSD 96 Query: 90 FGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPG 139 G G L S LT+ S+ + ++ + Sbjct: 97 LGRFGLGLKTASFSQCRRLTVYSKKADYKPVY-WTWDLDYVAKTNQWELLQW 147 >gi|163753410|ref|ZP_02160534.1| sensor histidine kinase [Kordia algicida OT-1] gi|161327142|gb|EDP98467.1| sensor histidine kinase [Kordia algicida OT-1] Length = 390 Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Query: 30 LIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 +++N++DA + VE I QITDNG G+ Q TSK Sbjct: 294 MVKNAIDAMKGKGALHVEI-IPADSFVRIQITDNGKGIPKRNFKKVFQPGFTSK 346 >gi|22124664|ref|NP_668087.1| hypothetical protein y0751 [Yersinia pestis KIM 10] gi|21957474|gb|AAM84338.1|AE013677_3 hypothetical [Yersinia pestis KIM 10] Length = 373 Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 4/56 (7%) Query: 17 GEIIERPSIAIKELIENSLDAESSRVETVI--AGGGKSFFQITDNGFGMTSEEIPM 70 G++ P +A+ EL+ N+ DA +SRV+ V+ GG +TD+G GMT E+ Sbjct: 25 GQVAHVPQVALTELVANAWDAGASRVDLVLPTDIGGI--LTVTDDGHGMTPEQFKK 78 >gi|108808928|ref|YP_652844.1| hypothetical protein YPA_2937 [Yersinia pestis Antiqua] gi|108810818|ref|YP_646585.1| hypothetical protein YPN_0653 [Yersinia pestis Nepal516] gi|145600500|ref|YP_001164576.1| hypothetical protein YPDSF_3246 [Yersinia pestis Pestoides F] gi|165925703|ref|ZP_02221535.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165936625|ref|ZP_02225192.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. IP275] gi|166010048|ref|ZP_02230946.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166214316|ref|ZP_02240351.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399081|ref|ZP_02304605.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420721|ref|ZP_02312474.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423130|ref|ZP_02314883.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470106|ref|ZP_02334810.1| hypothetical protein YpesF_20003 [Yersinia pestis FV-1] gi|229839080|ref|ZP_04459239.1| hypothetical protein YPH_1355 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229896568|ref|ZP_04511735.1| hypothetical protein YPS_4400 [Yersinia pestis Pestoides A] gi|229899643|ref|ZP_04514784.1| hypothetical protein YPF_4134 [Yersinia pestis biovar Orientalis str. India 195] gi|229901021|ref|ZP_04516145.1| hypothetical protein YP516_0691 [Yersinia pestis Nepal516] gi|270489200|ref|ZP_06206274.1| conserved hypothetical protein [Yersinia pestis KIM D27] gi|294505140|ref|YP_003569202.1| hypothetical protein YPZ3_3031 [Yersinia pestis Z176003] gi|108774466|gb|ABG16985.1| hypothetical protein YPN_0653 [Yersinia pestis Nepal516] gi|108780841|gb|ABG14899.1| hypothetical protein YPA_2937 [Yersinia pestis Antiqua] gi|145212196|gb|ABP41603.1| hypothetical protein YPDSF_3246 [Yersinia pestis Pestoides F] gi|165915274|gb|EDR33884.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922315|gb|EDR39492.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165990955|gb|EDR43256.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166204548|gb|EDR49028.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166961527|gb|EDR57548.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051585|gb|EDR62993.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057300|gb|EDR67046.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682360|gb|EEO78452.1| hypothetical protein YP516_0691 [Yersinia pestis Nepal516] gi|229687135|gb|EEO79210.1| hypothetical protein YPF_4134 [Yersinia pestis biovar Orientalis str. India 195] gi|229695446|gb|EEO85493.1| hypothetical protein YPH_1355 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700346|gb|EEO88378.1| hypothetical protein YPS_4400 [Yersinia pestis Pestoides A] gi|262363201|gb|ACY59922.1| hypothetical protein YPD4_3018 [Yersinia pestis D106004] gi|262367133|gb|ACY63690.1| hypothetical protein YPD8_3018 [Yersinia pestis D182038] gi|270337704|gb|EFA48481.1| conserved hypothetical protein [Yersinia pestis KIM D27] gi|294355599|gb|ADE65940.1| hypothetical protein YPZ3_3031 [Yersinia pestis Z176003] gi|320016641|gb|ADW00213.1| hypothetical protein YPC_3772 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 369 Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 4/56 (7%) Query: 17 GEIIERPSIAIKELIENSLDAESSRVETVI--AGGGKSFFQITDNGFGMTSEEIPM 70 G++ P +A+ EL+ N+ DA +SRV+ V+ GG +TD+G GMT E+ Sbjct: 21 GQVAHVPQVALTELVANAWDAGASRVDLVLPTDIGGI--LTVTDDGHGMTPEQFKK 74 >gi|302818176|ref|XP_002990762.1| hypothetical protein SELMODRAFT_429149 [Selaginella moellendorffii] gi|300141500|gb|EFJ08211.1| hypothetical protein SELMODRAFT_429149 [Selaginella moellendorffii] Length = 560 Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 8/77 (10%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQIT--------DNGFGMTSEEIPMAVQR 74 A+ ELI+N+ DA + R+E I G +++ D+G GMT ++I V Sbjct: 168 LFGAVAELIDNACDAGAKRLEISIQMGTLKSPEVSEVPMLCFLDDGLGMTHKDIVKMVSF 227 Query: 75 HCTSKISDDFSNIHTFG 91 DD I FG Sbjct: 228 GHKKPEQDDPEQIGRFG 244 >gi|145592125|ref|YP_001154127.1| DNA topoisomerase VI subunit B [Pyrobaculum arsenaticum DSM 13514] gi|145283893|gb|ABP51475.1| DNA topoisomerase VI, B subunit [Pyrobaculum arsenaticum DSM 13514] Length = 528 Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 10/65 (15%) Query: 27 IKELIENSLDAESS-----RV--ETVIAGGGKSFFQI--TDNGFGMTSEEIPMAVQR-HC 76 I+EL+ENSLDA + + + KS+ + DNG G+ EIP R Sbjct: 33 IRELVENSLDATETYGILPTIYLRVAVEDEQKSWVSVYAEDNGIGIPGNEIPNVFGRVFY 92 Query: 77 TSKIS 81 +SK Sbjct: 93 SSKYR 97 >gi|308479438|ref|XP_003101928.1| hypothetical protein CRE_08380 [Caenorhabditis remanei] gi|308262551|gb|EFP06504.1| hypothetical protein CRE_08380 [Caenorhabditis remanei] Length = 922 Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%) Query: 21 ERPSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 P AI EL++N+ DA++ +E + + + D+G GM+ EE+ + ++K Sbjct: 24 TSPFSAIAELVDNAYDADADTLEINLVRDYNDYYLEFKDDGTGMSQEEVSKMILFGHSNK 83 Query: 80 ISDDFSNIHTFG 91 SD I +G Sbjct: 84 TSD---KIGRYG 92 >gi|317505387|ref|ZP_07963312.1| ATPase [Prevotella salivae DSM 15606] gi|315663494|gb|EFV03236.1| ATPase [Prevotella salivae DSM 15606] Length = 490 Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 43/112 (38%), Gaps = 6/112 (5%) Query: 31 IENSLDAESSRVET-VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHT 89 ++NS+ A ++ + I GG+S I D+G GM +E+ A++ + + + + Sbjct: 39 LDNSISAGANNIWISRIWKGGQSIITIKDDGIGMNHQELIEAMRPGSQNPLEE--RSKSD 96 Query: 90 FGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPG 139 G G L S LT+ S+ + ++ + Sbjct: 97 LGRFGLGLKTASFSQCRRLTVYSKKADYKPVY-WTWDLDYVAKTNQWELLQW 147 >gi|325527612|gb|EGD04917.1| histidine kinase [Burkholderia sp. TJI49] Length = 665 Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 20/91 (21%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + ++ +A G + ++ DNG G+ E +P + Sbjct: 545 RLEQVLINLLGNALDAVAGVAAPAIDVTVAVSGATLGIEVRDNGPGIAPELLPRLFEPFF 604 Query: 77 TSKISDDFSNIHTFGFRGEAL-----PSIGA 102 T+K G RG L SI + Sbjct: 605 TTK---------EMG-RGLGLGLAISSSIAS 625 >gi|289167264|ref|YP_003445531.1| molecular chaperone, HSP90 family [Streptococcus mitis B6] gi|288906829|emb|CBJ21663.1| molecular chaperone, HSP90 family [Streptococcus mitis B6] Length = 688 Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Query: 25 IAIKELIENSLDAESSRVETVIAG-GGKSFF-QITDNGFGMTSEEI 68 AI EL+ N LDA ++ V+ I K +I DNG GM+ ++ Sbjct: 29 SAISELVANGLDAGATNVKLYINSINKKKSILEIIDNGSGMSYNDL 74 >gi|300777914|ref|ZP_07087772.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] gi|300503424|gb|EFK34564.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] Length = 688 Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 7/57 (12%) Query: 28 KELIENSLDAESSRVETVIA-------GGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 KELI NS+ A S + I G I D+G G+ E V + T Sbjct: 37 KELINNSIQAGSKNIFITINYTNSLTVKSGIEKIVIEDDGHGVPYSEFKKKVLQIAT 93 >gi|239616434|ref|YP_002939756.1| histidine kinase [Kosmotoga olearia TBF 19.5.1] gi|239505265|gb|ACR78752.1| histidine kinase [Kosmotoga olearia TBF 19.5.1] Length = 180 Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Query: 32 ENSLDAESSRVETVIAG--GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 +N++DA +S+++ I G + F + DNG G+ E++ + T K Sbjct: 13 QNAVDAGASQIKLSIEEIPGERFSFVVEDNGKGIPEEKLKEILDPFYTEK 62 >gi|297582880|ref|YP_003698660.1| integral membrane sensor signal transduction histidine kinase [Bacillus selenitireducens MLS10] gi|297141337|gb|ADH98094.1| integral membrane sensor signal transduction histidine kinase [Bacillus selenitireducens MLS10] Length = 693 Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Query: 31 IENSLDAESSR----VETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 I+N++DA + + + + G+ + DNG G+ E++ TSK Sbjct: 586 IQNAIDAMAGKTAPALSIRLYQEGQDLLVDVADNGSGIRPEDLDKLFDPFFTSK 639 >gi|238923342|ref|YP_002936857.1| sensor histidine kinase [Eubacterium rectale ATCC 33656] gi|238875016|gb|ACR74723.1| sensor histidine kinase [Eubacterium rectale ATCC 33656] Length = 464 Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Query: 30 LIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQ 73 L +N+ A ++R+E I G G + DNG G++ E++ + Sbjct: 369 LCDNAKKAGATRIEVNITGSG---ISVKDNGRGISKEDMKHIFE 409 >gi|229073310|ref|ZP_04206460.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Bacillus cereus F65185] gi|228709817|gb|EEL61841.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Bacillus cereus F65185] Length = 819 Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 7/79 (8%) Query: 26 AIKELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 A+ ELI+NS DA++ I G + DNG GM I A R TS Sbjct: 27 ALLELIKNSSDADALNCNIEIDTHYKSPYGLGRIVLEDNGNGMNPYIIENAFLRIATS-F 85 Query: 81 SDDFSNIHTFGFRGEALPS 99 + + F+ EAL S Sbjct: 86 KTKYQKVSPI-FKREALGS 103 >gi|163782177|ref|ZP_02177176.1| histidine kinase sensor protein [Hydrogenivirga sp. 128-5-R1-1] gi|159882709|gb|EDP76214.1| histidine kinase sensor protein [Hydrogenivirga sp. 128-5-R1-1] Length = 594 Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 7/59 (11%) Query: 24 SIAIKE----LIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 + +KE LI NS++ + V I G + D+G G+ EE + +S Sbjct: 497 ASLLKEVFYNLINNSIEWGARNVRIRIGEDGLEYV---DDGKGIPPEEAENIFMPYFSS 552 >gi|322372405|ref|ZP_08046941.1| hypothetical protein HMPREF0848_00111 [Streptococcus sp. C150] gi|321277447|gb|EFX54516.1| hypothetical protein HMPREF0848_00111 [Streptococcus sp. C150] Length = 688 Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 25 IAIKELIENSLDAESSRVETVIAG-GGKSFF-QITDNGFGMTSEEIP 69 AI EL+ N LDA ++ V+ I K +I DNG GM+ ++ Sbjct: 29 SAISELVANGLDAGATNVKLYINSINKKKSILEIIDNGSGMSYNDLA 75 >gi|229547358|ref|ZP_04436083.1| possible ATP-binding protein [Enterococcus faecalis TX1322] gi|256854884|ref|ZP_05560248.1| predicted protein [Enterococcus faecalis T8] gi|307292236|ref|ZP_07572100.1| hypothetical protein HMPREF9509_02528 [Enterococcus faecalis TX0411] gi|229307507|gb|EEN73494.1| possible ATP-binding protein [Enterococcus faecalis TX1322] gi|256710444|gb|EEU25488.1| predicted protein [Enterococcus faecalis T8] gi|306496742|gb|EFM66295.1| hypothetical protein HMPREF9509_02528 [Enterococcus faecalis TX0411] gi|315028685|gb|EFT40617.1| conserved hypothetical protein [Enterococcus faecalis TX4000] Length = 483 Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 5/102 (4%) Query: 31 IENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTF 90 ++NS+ A ++R++ + + I DNG+GM+ E+ A++ S+ D Sbjct: 33 VDNSVSANATRIDINF-NNQQKYVSILDNGYGMSKIELLQAMK--YGSRSIYDLRTQDDL 89 Query: 91 GFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISS 130 G G L S LT++S +GA + K + Sbjct: 90 GRFGLGLKMASFSQCRKLTVVSIKDGEYSGAVWDLDVVKKKN 131 >gi|330878698|gb|EGH12847.1| hypothetical protein PSYMP_22493 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 673 Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 P+ + E++ N+ DA+++ V+ I + D+G GM E+ R Sbjct: 34 PA-VVTEIVANAWDADANLVDVDIQD---DKIVVQDDGHGMGPGELQARFLR 81 >gi|301385610|ref|ZP_07234028.1| hypothetical protein PsyrptM_23367 [Pseudomonas syringae pv. tomato Max13] gi|302061460|ref|ZP_07253001.1| hypothetical protein PsyrptK_15855 [Pseudomonas syringae pv. tomato K40] Length = 673 Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 P+ + E++ N+ DA+++ V+ I + D+G GM E+ R Sbjct: 34 PA-VVTEIVANAWDADANLVDVDIQD---DKIVVQDDGHGMGPGELQARFLR 81 >gi|253996177|ref|YP_003048241.1| DNA topoisomerase IV subunit B [Methylotenera mobilis JLW8] gi|253982856|gb|ACT47714.1| DNA topoisomerase (ATP-hydrolyzing) [Methylotenera mobilis JLW8] Length = 661 Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 81/238 (34%), Gaps = 36/238 (15%) Query: 21 ERPSIAIKELIENSLD-A---ESSRVETVIAGGGKSFFQITDNGFGMTSE--------EI 68 + P+ ++E+I+N+ D A ++ +E + G ++TDNG G+ E + Sbjct: 31 DSPTHIVQEVIDNAADEALGGHATNIEVTVYKDGA--VEVTDNGRGIPVEIPKGETQPAV 88 Query: 69 PMAV-QRHCTSKISDDFSNIHTFGFRG----------EALPSIGAVSHLTLMSRPPQNNT 117 + Q H K + N ++ F G AL + L + + Sbjct: 89 ELVFVQLHAGGKFDKEDEN-SSYRFSGGLHGVGVSVTNALST-----RLEVKVKRGGKVH 142 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 G + + S +V + +I+ A+ Sbjct: 143 GLIFENGHCVEPLAEVGKCLKRDTGTTVKCW----PDPKYFDSPKVSIQQLEHLIKSKAV 198 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIG-EDFINNAVELNEKSNEITLQ 234 VS + S ++ ++ + P+ + ++IG + ++ V + + E Q Sbjct: 199 LLRGVSVSLSIEGTDGFEERTWTYADGLPQYLDELIGEREIADDEVPVPIIAGEFYHQ 256 >gi|149916959|ref|ZP_01905460.1| HSP90 [Plesiocystis pacifica SIR-1] gi|149822237|gb|EDM81628.1| HSP90 [Plesiocystis pacifica SIR-1] Length = 644 Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 23/102 (22%) Query: 20 IERPSIAI---KELIENSLDAESSRVETVI-----AGGGKS---FFQITDNGFGMTSE-- 66 + + S A+ +EL++NS+DA SS+VE + GGG + + D G GM E Sbjct: 14 VTQFSSALDFYRELVQNSIDAGSSQVEIWLDFLPDEGGGTNGVIEIHVDDFGDGMNEEII 73 Query: 67 EIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTL 108 + + T K +D + I FG IG VS + Sbjct: 74 DSQLTTLFSST-K-ENDLTKIGKFG--------IGFVSVFAI 105 >gi|125972860|ref|YP_001036770.1| histidine kinase [Clostridium thermocellum ATCC 27405] gi|256005730|ref|ZP_05430685.1| histidine kinase [Clostridium thermocellum DSM 2360] gi|281417059|ref|ZP_06248079.1| histidine kinase [Clostridium thermocellum JW20] gi|125713085|gb|ABN51577.1| histidine kinase [Clostridium thermocellum ATCC 27405] gi|255990303|gb|EEU00430.1| histidine kinase [Clostridium thermocellum DSM 2360] gi|281408461|gb|EFB38719.1| histidine kinase [Clostridium thermocellum JW20] gi|316940902|gb|ADU74936.1| ATP-binding region ATPase domain protein [Clostridium thermocellum DSM 1313] Length = 188 Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 31 IENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 ++NS+DA++S++ +I ++ DNG GM S+ + V T Sbjct: 12 VQNSIDAKASKISILICADKKSDLLEIEVKDNGIGMDSDFLKEVVNPFTT 61 >gi|226354971|ref|YP_002784711.1| histidine kinase [Deinococcus deserti VCD115] gi|226316961|gb|ACO44957.1| putative histidine kinase, classic; putative membrane protein [Deinococcus deserti VCD115] Length = 528 Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Query: 21 ERPSIAIKELIENSLDAESSRVETV--IAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 +R I L+ N+L A + V + GG ++ D+G G+ +++ R Sbjct: 409 DRLKQVIINLVGNALKAGARTVTLRSALEDGGTQVHLRVQDDGPGIPEDQLERLFDRFY 467 >gi|289580320|ref|YP_003478786.1| DNA topoisomerase VI subunit beta [Natrialba magadii ATCC 43099] gi|289529873|gb|ADD04224.1| DNA topoisomerase VI, B subunit [Natrialba magadii ATCC 43099] Length = 824 Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 66/215 (30%), Gaps = 41/215 (19%) Query: 23 PSIAIKELIENSLDAESSR------VETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQR- 74 A+KE ++N+LDA + + I G + DNG G+T E +P + Sbjct: 47 LVTAVKEAVDNALDA-AEEAGILPDIYVEIQEEGDYYRLIVEDNGPGLTKESLPKVFGKL 105 Query: 75 ------HCTSKISDDFSNIHTFGFRGEALPSIGAV--SHLT------LMSRPPQNNTGAQ 120 H + G +G + AV S LT + SR + Sbjct: 106 LYGSRFHA---------REQSRGQQGIGIS--AAVLYSQLTSGKPAKITSRTEGTDEAQY 154 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + + +++ T D L + + L + I+ A+ P Sbjct: 155 FELIVDTDDNEPEISVEETTTW---DRPHGTRIELEMEANMRARQQLH-NYIKHTAVVNP 210 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGE 215 + F+ PE ++ Sbjct: 211 HARLELR---EPKAHFKFERATDQLPEETEEIRPH 242 >gi|332672326|ref|YP_004421570.1| topoisomerase II large subunit [Campylobacter phage NCTC12673] gi|327493503|gb|AEA86362.1| topoisomerase II large subunit [Campylobacter phage NCTC12673] Length = 616 Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 61/180 (33%), Gaps = 31/180 (17%) Query: 29 ELIENSLD----AE---SSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS-- 78 E I+NS+D ++++ I G I+DNG G+ + MA + TS Sbjct: 59 EAIQNSIDEFTRTGGKYANKISLKIDKDSGI--ITISDNGRGLPIDTYVMATTKFRTSSN 116 Query: 79 -----KISDDFSNIHTFGFRGEALPSIGA------VSHLTLMSRPPQNNTGAQIAISGEK 127 K D I G IG+ S L + + + G ++ Sbjct: 117 YTFLEKEKKDRITIGAHG--------IGSKLIPLFSSEYQLTTITLEGDRGIVKCLNNMS 168 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFS 187 I + + V F RL + N I ++ +A + P + FTF Sbjct: 169 IIEHKEDKAPASSTHGVTIKFKPDFERLELKEINDDLINHIHALLINIAYSNPGIEFTFQ 228 >gi|302551688|ref|ZP_07304030.1| ATPase [Streptomyces viridochromogenes DSM 40736] gi|302469306|gb|EFL32399.1| ATPase [Streptomyces viridochromogenes DSM 40736] Length = 517 Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 33/111 (29%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFF---QITDNGFGMTSEEIPMAVQRHCTSKISD 82 A+ +LI+NS+DA++ + I DNG GM + A Sbjct: 41 AVADLIDNSIDADADTIVVHFLRD-ADRILTLLIIDNGKGMDEAGLDAA----------- 88 Query: 83 DFSNIHTFGFR---GE-AL---------PSIGAVSHLTLMSRPPQNNTGAQ 120 T G R GE AL S+ S LT++SR ++ + Sbjct: 89 -----MTVGRRRDYGEGALGMYGTGLKAASLSHASSLTVVSRTRRSRAAGR 134 >gi|304915|gb|AAA20098.1| DNA repair protein [Escherichia coli] Length = 23 Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats. Identities = 13/23 (56%), Positives = 18/23 (78%) Query: 1 MKIRKLSEKIINQIAAGEIIERP 23 M I+ L ++ NQIAAGE++ERP Sbjct: 1 MPIQVLPPQLANQIAAGEVVERP 23 >gi|163749330|ref|ZP_02156579.1| DNA topoisomerase IV subunit B [Shewanella benthica KT99] gi|161331049|gb|EDQ01975.1| DNA topoisomerase IV subunit B [Shewanella benthica KT99] Length = 628 Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 76/190 (40%), Gaps = 37/190 (19%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A ++++E + + ++ D+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHATKIEITLHKD--NSLEVIDDGRGMPVDIHPEEGISGV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQ--NNTGA 119 + + + H +K S+D + G G AL S + + R + Sbjct: 88 ELILTKLHAGAKFSNDNYQ-FSGGLHGVGISVVNALSS-----RVEITVRRSGIVYDIAF 141 Query: 120 QIAISGEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + E++ N GT V F+ IP+ + S + +T +++ A+ Sbjct: 142 EHGDMVEELRETGTCGRRNTGTRVH----FWPIPS---YFDSANFSVSKLTYLLKAKAVL 194 Query: 179 YPKVSFTFST 188 P + F+ Sbjct: 195 CPGLKIKFTN 204 >gi|162419815|ref|YP_001608342.1| hypothetical protein YpAngola_A4053 [Yersinia pestis Angola] gi|162352630|gb|ABX86578.1| conserved hypothetical protein [Yersinia pestis Angola] Length = 364 Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 4/56 (7%) Query: 17 GEIIERPSIAIKELIENSLDAESSRVETVI--AGGGKSFFQITDNGFGMTSEEIPM 70 G++ P +A+ EL+ N+ DA +SRV+ V+ GG +TD+G GMT E+ Sbjct: 21 GQVAHVPLVALTELVANAWDAGASRVDLVLPTDIGGI--LTVTDDGHGMTPEQFKK 74 >gi|70921890|ref|XP_734199.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56506715|emb|CAH83404.1| hypothetical protein PC300487.00.0 [Plasmodium chabaudi chabaudi] Length = 212 Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 3/100 (3%) Query: 102 AVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAM--NPGTIVEVRDLFFTIPARLNFLK 159 VS+LT+ ++ ++ + + K + P A GTI+ DLF+ + RL L Sbjct: 1 HVSYLTITTKKRKSLSCYTCSYKDGKPTQKEPTACSGKDGTIIRFDDLFYNMKTRLKTL- 59 Query: 160 SEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQ 199 + E N DV+++ +I YP V+FT SN ++ Sbjct: 60 NHNDEYNKCLDVLQKYSIHYPHVTFTCKKWLSNVVDLSTY 99 >gi|260427187|ref|ZP_05781166.1| C4-dicarboxylate transport sensor protein DctB [Citreicella sp. SE45] gi|260421679|gb|EEX14930.1| C4-dicarboxylate transport sensor protein DctB [Citreicella sp. SE45] Length = 577 Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 15/103 (14%) Query: 22 RPSIAIKELIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 R + L+ N++DA E+ +E ++A G + + DNG G+ E++ + T Sbjct: 467 RIEQVLVNLLRNAIDATKSEAHPEIEIILASGETAVLSVRDNGHGI--EDLDALFEPFYT 524 Query: 78 SKISDDFSNIHTFGFRGEALPSIGAVSHL--TLMSRPPQNNTG 118 +K D + + G A+ S G V+ L L +R + Sbjct: 525 TKQPGDGTGL------GLAISS-GIVADLGGRLTARNGSDGGA 560 >gi|269126045|ref|YP_003299415.1| putative sensor with HAMP domain [Thermomonospora curvata DSM 43183] gi|268311003|gb|ACY97377.1| putative sensor with HAMP domain [Thermomonospora curvata DSM 43183] Length = 973 Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 14/69 (20%) Query: 17 GEIIERPSIAIKELIENSLDAESS-------RVETV--IAGGGKSFFQITDNGFGMTSEE 67 G+++ + EL+EN ++ +V + GG + QITDNG G++ E+ Sbjct: 515 GQVVNDLVHLVAELVEN-----ATVFSPQHTKVTVSGHLLSGGGAMLQITDNGVGISPED 569 Query: 68 IPMAVQRHC 76 + A R Sbjct: 570 LEQANWRLA 578 >gi|269797250|ref|YP_003311150.1| histidine kinase [Veillonella parvula DSM 2008] gi|269093879|gb|ACZ23870.1| histidine kinase [Veillonella parvula DSM 2008] Length = 728 Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 4/46 (8%) Query: 23 PSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDNGFGMTSE 66 P+ + EL++NS DA+++ V+ G + D+G GM+ E Sbjct: 24 PAAMV-ELVKNSYDADATYVKITYKKTNSGLKII-VEDDGHGMSQE 67 >gi|218884530|ref|YP_002428912.1| DNA topoisomerase VI subunit B [Desulfurococcus kamchatkensis 1221n] gi|218766146|gb|ACL11545.1| Type 2 DNA topoisomerase VI subunit B [Desulfurococcus kamchatkensis 1221n] Length = 530 Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 13/66 (19%) Query: 22 RPSIA----IKELIENSLDA-ESS----RVETVIAG----GGKSFFQITDNGFGMTSEEI 68 P+ A ++EL+EN+LDA ++ ++ I + DNG G+ + + Sbjct: 29 NPARAIYQTVRELVENALDATDAHGIMPDIKISIRKVDEIQEFYRITVEDNGIGIPPDVV 88 Query: 69 PMAVQR 74 P A R Sbjct: 89 PDAFGR 94 >gi|259505959|ref|ZP_05748861.1| sensor histidine kinase [Corynebacterium efficiens YS-314] gi|259166440|gb|EEW50994.1| sensor histidine kinase [Corynebacterium efficiens YS-314] Length = 471 Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 16/83 (19%) Query: 9 KIINQIAAGEIIE----RPSIAIKELIENSL-----DAESSRVETVIA-GGGKSFFQITD 58 ++N+ + ++E R + L+ N L DA VE I+ GG ++ D Sbjct: 344 TVVNKTGSLPVVEGDATRLHQVLTNLVNNGLNHGGPDA---SVEIEISAEGGSVLVRVVD 400 Query: 59 NGFGMTSEEIPMAVQRHC---TS 78 +G GMT+E+ +R TS Sbjct: 401 DGVGMTAEDAQHIFERFYRTDTS 423 >gi|25029049|ref|NP_739103.1| putative sensor kinase [Corynebacterium efficiens YS-314] gi|23494336|dbj|BAC19303.1| putative sensor kinase [Corynebacterium efficiens YS-314] Length = 475 Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 16/83 (19%) Query: 9 KIINQIAAGEIIE----RPSIAIKELIENSL-----DAESSRVETVIA-GGGKSFFQITD 58 ++N+ + ++E R + L+ N L DA VE I+ GG ++ D Sbjct: 348 TVVNKTGSLPVVEGDATRLHQVLTNLVNNGLNHGGPDA---SVEIEISAEGGSVLVRVVD 404 Query: 59 NGFGMTSEEIPMAVQRHC---TS 78 +G GMT+E+ +R TS Sbjct: 405 DGVGMTAEDAQHIFERFYRTDTS 427 >gi|254932547|ref|ZP_05265906.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|293584104|gb|EFF96136.1| conserved hypothetical protein [Listeria monocytogenes HPB2262] gi|332310738|gb|EGJ23833.1| hypothetical protein LMOSA_12240 [Listeria monocytogenes str. Scott A] Length = 641 Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 67/174 (38%), Gaps = 22/174 (12%) Query: 29 ELIENSLDAESSRVET--VIAGGGKSFFQITDNGFGMTSE-----EIPMAVQRHCTSKIS 81 ELI N+ DA++ V I ++ + D+G GM+ E + T+ I+ Sbjct: 32 ELIANAYDADAKNVYVIDRIDE--ENKLIVEDDGSGMSYENKDVKNFLSVAKESRTNAIN 89 Query: 82 D--DFSNIHTFGFRGEA-LPSIGAVSH-LTLMSRPPQNNTGA--------QIAISGEKIS 129 +N G +G L S+ +VS + + + +G + + + + Sbjct: 90 SYTKLNNRRKMGRKGVGKLASL-SVSENVNIKTIKDGEKSGFVLSRKVINKKLEAINEDT 148 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 N GT +E+ + + +P L+ + + ++ + D R+ + Sbjct: 149 ISFIKIKNHGTAIEMTNPTYKLPVHLSTMANNLLKIFPLVDETFRIHLIRGDKH 202 >gi|225012665|ref|ZP_03703100.1| heat shock protein Hsp90 [Flavobacteria bacterium MS024-2A] gi|225003198|gb|EEG41173.1| heat shock protein Hsp90 [Flavobacteria bacterium MS024-2A] Length = 627 Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 36/128 (28%) Query: 27 IKELIENSLDA-----------------ESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 ++ELI N+ DA ++++E I GK + D G GMT +E+ Sbjct: 29 LRELISNATDATTKLHHLSSLGEIKGDLGATQIEIKIDKKGKKL-HVIDQGIGMTEDEVQ 87 Query: 70 MAVQRHCTSKISDDFSNIH------------TFGFRGEALPSIGAVS-HLTLMSRPPQNN 116 + S + GF S VS + ++++ +++ Sbjct: 88 KYINEVAFSGAEEFLEQYKDSAKDSGIIGHFGLGF-----YSAFMVSEKVEIITKSHKDS 142 Query: 117 TGAQIAIS 124 A Sbjct: 143 PAAHWTCD 150 >gi|56475452|ref|YP_157041.1| sensory transduction histidine kinase [Aromatoleum aromaticum EbN1] gi|56311495|emb|CAI06140.1| Sensory transduction histidine kinase [Aromatoleum aromaticum EbN1] Length = 736 Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTSEEI-PMAVQRH 75 ER I L++N+LDA + + + + D+G GMTSE + + Sbjct: 613 ERLERVIGHLVQNALDATQDDGKVTIRVDMPDPSSARVAVEDSGCGMTSEFMKERLFKPF 672 Query: 76 CTSK 79 TSK Sbjct: 673 HTSK 676 >gi|320451219|ref|YP_004203315.1| sensor histidine kinase [Thermus scotoductus SA-01] gi|320151388|gb|ADW22766.1| sensor histidine kinase [Thermus scotoductus SA-01] Length = 468 Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Query: 21 ERPSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 +R + L+ N++ A + + G K ++ D+G G+ E +P +R Sbjct: 355 DRLHQVLANLLSNAIKAGARHIWLRAFDLGEKVVVRVEDDGEGIPKEHLPHLFERFY 411 >gi|124262849|ref|YP_001023319.1| hypothetical protein Mpe_B0309 [Methylibium petroleiphilum PM1] gi|124262095|gb|ABM97084.1| hypothetical protein Mpe_B0309 [Methylibium petroleiphilum PM1] Length = 609 Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM-TSEEIPMAVQRHCT 77 A+ EL+ NS+DA +++V+ + G + ++D+G G + EEI + T Sbjct: 20 AVLELVMNSIDAGATKVQVTLTG---THLTVSDDGRGFQSREEIENWFETFGT 69 >gi|210631988|ref|ZP_03297153.1| hypothetical protein COLSTE_01045 [Collinsella stercoris DSM 13279] gi|210159790|gb|EEA90761.1| hypothetical protein COLSTE_01045 [Collinsella stercoris DSM 13279] Length = 466 Score = 53.9 bits (128), Expect = 7e-05, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Query: 16 AGEIIERPSIAIKELIENSL-----DAESSRVETVIAGGGKS--FFQITDNGFGMTSEEI 68 A E++ P+ I+ L+EN++ D + ++ + G++ ++ D+G GM + Sbjct: 340 AEEVLI-PAFVIQPLVENAVRHAMPDEGALKISITVERAGEAAVSIRVADDGMGMDEQTA 398 Query: 69 PMAVQR 74 R Sbjct: 399 MRLFDR 404 >gi|237726504|ref|ZP_04556985.1| predicted protein [Bacteroides sp. D4] gi|229435030|gb|EEO45107.1| predicted protein [Bacteroides dorei 5_1_36/D4] Length = 700 Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 20 IERPSIAIKELIENSLDAESSRVETVIAGGGKSF----FQITDNGFGMTSEEIP 69 I A+ EL++N DA + V + G ++ D+G+GM+ E+I Sbjct: 24 ITDRVTALFELVKNCYDANAQNVNVIFENVGVGKKQAVIRVEDDGYGMSFEDIR 77 >gi|124027833|ref|YP_001013153.1| DNA topoisomerase VI subunit B [Hyperthermus butylicus DSM 5456] gi|123978527|gb|ABM80808.1| Type II DNA topoisomerase VI subunit B [Hyperthermus butylicus DSM 5456] Length = 535 Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 18/76 (23%) Query: 22 RPSIA----IKELIENSLDAESS-------RVETVI----AGGGKSFFQITDNGFGMTSE 66 P+ A ++EL+EN+LDA + + VI + DNG G+ + Sbjct: 34 SPARALYQTVRELVENALDA--TDVHGILPDITIVIERVNENSNYYRITVEDNGIGIQPQ 91 Query: 67 EIPMAVQR-HCTSKIS 81 +P A + +SK Sbjct: 92 YVPYAFGQVLYSSKYK 107 >gi|134298176|ref|YP_001111672.1| hypothetical protein Dred_0298 [Desulfotomaculum reducens MI-1] gi|134050876|gb|ABO48847.1| hypothetical protein Dred_0298 [Desulfotomaculum reducens MI-1] Length = 543 Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 7/72 (9%) Query: 3 IRKLSEKIINQ---IAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKS--FFQIT 57 I+KL+ ++ IA + P I+E I NS DA+++ + I + QI+ Sbjct: 5 IKKLNVNEVSLYREIAKNLV--NPLEVIREAISNSHDAQANEIRIKIYRNSDNALCIQIS 62 Query: 58 DNGFGMTSEEIP 69 D+G GM+ E+ Sbjct: 63 DDGKGMSEEDFE 74 >gi|327310398|ref|YP_004337295.1| DNA topoisomerase VI subunit B [Thermoproteus uzoniensis 768-20] gi|326946877|gb|AEA11983.1| DNA topoisomerase VI, B subunit [Thermoproteus uzoniensis 768-20] Length = 528 Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 18/77 (23%) Query: 21 ERPSIA----IKELIENSLDAESS-------RVETVIA--GGGKS--FFQITDNGFGMTS 65 + P+ A ++EL+ENSLDA + + I KS + DNG G+ Sbjct: 26 QNPARAMYQTVRELVENSLDA--TEPYGILPNITITIKPVDEAKSWYSVYVEDNGVGIPG 83 Query: 66 EEIPMAVQR-HCTSKIS 81 EIP R +SK Sbjct: 84 HEIPNVFGRVFYSSKYK 100 >gi|255583448|ref|XP_002532483.1| zinc finger protein, putative [Ricinus communis] gi|223527808|gb|EEF29907.1| zinc finger protein, putative [Ricinus communis] Length = 754 Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 11/75 (14%) Query: 26 AIKELIENSLDAESSRVETVIA-----GGGKS--FFQITDNGFGMTSEEIPMAVQRHCTS 78 AI EL++NS DA++SR++ +I GK I D+G GMT +E+ Sbjct: 264 AIAELVDNSRDAKASRLDILIETIYSKRAGKDIPMLSIIDDGHGMTHQEVMRMTCFGH-- 321 Query: 79 KIS--DDFSNIHTFG 91 K DD I FG Sbjct: 322 KQPDVDDLDRIGRFG 336 >gi|218961478|ref|YP_001741253.1| Sensory transduction histidine kinase [Candidatus Cloacamonas acidaminovorans] gi|167730135|emb|CAO81047.1| Sensory transduction histidine kinase [Candidatus Cloacamonas acidaminovorans] Length = 189 Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Query: 31 IENSLDAESSRVETVIAGGGKSFF---QITDNGFGMTSEEIPMAVQRHCTSK 79 IENS+ A++ ++ I + + D+G GM S+ + A TSK Sbjct: 12 IENSVRAKAKNIKIRIIRDVQDNILRLIVEDDGVGMDSQTLDKAQSPFYTSK 63 >gi|119510355|ref|ZP_01629490.1| hypothetical protein N9414_15867 [Nodularia spumigena CCY9414] gi|119464992|gb|EAW45894.1| hypothetical protein N9414_15867 [Nodularia spumigena CCY9414] Length = 607 Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 16/129 (12%) Query: 26 AIKELIENSLDAESSRVET-------VIAGGGKSFFQ---ITDNGFGMTSEEIPMAVQRH 75 AI EL++N++ A +S+VE + +S + + DNG GM ++ + +A+Q Sbjct: 29 AIAELMDNAIQAGASQVELLCGERKQQVEERKRSRIEQIAVLDNGKGMDADVLRLALQFG 88 Query: 76 CTSKISDDFSN-IHTFGFRGEALP--SIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVR 132 + +++D I FG LP SI + + + + +I S + Sbjct: 89 NGTYLAEDKHTGIGRFGM---GLPSSSISQCQRVDVWTWQNGVENALHSYLDLNEIKSRQ 145 Query: 133 PVAMNPGTI 141 + T Sbjct: 146 MTEVPEPTT 154 >gi|149926990|ref|ZP_01915248.1| hypothetical protein LMED105_09052 [Limnobacter sp. MED105] gi|149824211|gb|EDM83431.1| hypothetical protein LMED105_09052 [Limnobacter sp. MED105] Length = 615 Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Query: 25 IAIKELIENSLDAESSRVETV---IAGGGKSFFQITDNGFGMTSEEIPM 70 + ELI NS DA+++ V+ + + I D+G GMT EE+ Sbjct: 27 SVLSELISNSWDADATTVKVDFLTLEN--RKEISIRDDGHGMTFEELNK 73 >gi|170036716|ref|XP_001846208.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167879605|gb|EDS42988.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 634 Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 109/358 (30%), Gaps = 51/358 (14%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 S + L++NS+DA S V I + Q+ DNG G ++ + C+ ++ Sbjct: 4 LSEVVIALLKNSVDAHSFSVAIRI-CPELFWLQVLDNGDGFDEADLASVGK--CSCPVNI 60 Query: 83 DFSNIH-----------TFGFRGEALPSIGAVSHLTLMS---RPPQNNTGAQIAISG--- 125 DF + + L IG + + + R + ++ Sbjct: 61 DFKQMKPVKKFARLTGSSL------LEIIGRCEEVRIETLDCRHGDAKSHSRSFKHPAAA 114 Query: 126 ----------EKISSVRPVAMNPGTIVEVRDLFFTIPAR-LNFLKSEQVETNLITDVIRR 174 + V + GT V ++++F+ P R + + + +R Sbjct: 115 GHNSSQADGTTTQYQRQCVRKSQGTTVTLKNVFWQDPDRGRRHSRKTDDDYRKLLADLRA 174 Query: 175 MAIAYPKVSFTFSTI--KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 A+ + SFT + +K + T + + Q+ +D + + Sbjct: 175 FALVHFDRSFTLQNLSTSEVEFKSKKKPTLASKYCELYQLSEQDVDI----TTCTKDNVC 230 Query: 233 LQGYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP 292 ++GY FING + + + + +L+ P Sbjct: 231 IEGYFSRREARPTLEPVQLTFINGLPSDAYLPT------VNDVLTQQKQSLDFVLVATYP 284 Query: 293 --RQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQD 348 + P R + + ++AI + ++ +D Sbjct: 285 KNDVLTQLTEPVLRNCLLRCLNQYKKSLENRRKQAIVVVSPEQIPAPQPQPHAADEED 342 >gi|308461931|ref|XP_003093253.1| hypothetical protein CRE_06125 [Caenorhabditis remanei] gi|308250651|gb|EFO94603.1| hypothetical protein CRE_06125 [Caenorhabditis remanei] Length = 874 Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%) Query: 22 RPSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 P AI EL++N+ DA+++ +E + G + + DNG GM+ EE+ + + K Sbjct: 25 SPFSAIAELVDNAYDADAATLEINLVQHFGDYYLEFKDNGTGMSQEEVAKTILFGHSKKT 84 Query: 81 SDDFSNIHTFG 91 S+ I +G Sbjct: 85 SE---KIGRYG 92 >gi|170731362|ref|YP_001763309.1| hypothetical protein Bcenmc03_0006 [Burkholderia cenocepacia MC0-3] gi|169814604|gb|ACA89187.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3] Length = 497 Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 22 RPSIAIKELIENSLDAESSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMA 71 + A+ ++++NS+ A ++ V + G S + DNG GM+ E+ A Sbjct: 25 STAAALADIVDNSISAGATEVRIDFSWAGPNSRISVLDNGRGMSDAELESA 75 >gi|294139238|ref|YP_003555216.1| DNA topoisomerase IV subunit B [Shewanella violacea DSS12] gi|293325707|dbj|BAJ00438.1| DNA topoisomerase IV, B subunit [Shewanella violacea DSS12] Length = 628 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 80/220 (36%), Gaps = 39/220 (17%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A ++++E + + ++ D+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHATKIEITLHKD--NSLEVIDDGRGMPVDIHPEEGISGV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQ--NNTGA 119 + + + H K S+D + G G AL S + + R + Sbjct: 88 ELILTKLHAGGKFSNDNYQ-FSGGLHGVGISVVNALSS-----RVEITVRRSGIVYDIAF 141 Query: 120 QIAISGEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + E++ N GT V F+ IP+ + S +T +++ A+ Sbjct: 142 ENGDMVEELRETGTCGRRNTGTRVH----FWPIPS---YFDSANFSVPKLTYLLKAKAVL 194 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFI 218 P + F+ ++ + + + + Sbjct: 195 CPGLKIKFTN--KQTDEVQEWFYESGLTDYLQSSTKDAIM 232 >gi|110668559|ref|YP_658370.1| DNA topoisomerase VI subunit B [Haloquadratum walsbyi DSM 16790] gi|109626306|emb|CAJ52764.1| DNA topoisomerase VI subunit B (type II DNA topoisomerase) [Haloquadratum walsbyi DSM 16790] Length = 1304 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 12/59 (20%) Query: 23 PSIAIKELIENSLDAESSR-------VETVIAGGG--KSFFQITDNGFGMTSEEIPMAV 72 A+KE ++N+LDA + + I G + + DNG G+T E++P Sbjct: 47 LVTAVKEAVDNALDA--TEEAGIKPDISIEIRESGDYYTLI-VEDNGPGITREQVPKVF 102 >gi|330960678|gb|EGH60938.1| hypothetical protein PMA4326_19233 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 673 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 P+ + E++ N+ DA+++ V+ I + D+G GM E+ R Sbjct: 34 PA-VVTEIVANAWDADANLVDVDIQD---DKIVVHDDGHGMGPGELQARFLR 81 >gi|327398516|ref|YP_004339385.1| histidine kinase [Hippea maritima DSM 10411] gi|327181145|gb|AEA33326.1| histidine kinase [Hippea maritima DSM 10411] Length = 317 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 5/59 (8%) Query: 26 AIKELIENSLDAESS----RVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTSK 79 I E+I+N++DA + ++E + GK+ F ++ DNG G+ E+P+ ++K Sbjct: 235 IIDEIIKNAIDATQTVEKPKIEIKVFKKGKNAFIEVKDNGKGIEENELPLTTIPFYSTK 293 >gi|126664910|ref|ZP_01735893.1| hypothetical protein MELB17_17619 [Marinobacter sp. ELB17] gi|126630280|gb|EBA00895.1| hypothetical protein MELB17_17619 [Marinobacter sp. ELB17] Length = 608 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 16/120 (13%) Query: 26 AIKELIENSLDAESSRVETV-------IAGGGKSFFQ---ITDNGFGMTSEEIPMAVQRH 75 AI ELI+NS A +S +E + I +S + DNG GM + + MA+Q Sbjct: 30 AIAELIDNSQQAGASEIEVICLETEKMIEERRRSRIDRLAVIDNGQGMDAVTLRMALQFG 89 Query: 76 CTSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRP 133 +++ +D S I FG L SI + + + S + I ++I Sbjct: 90 NGTRL-NDRSGIGRFGM---GLPNASISQAARVDVWSWQNGADNALHSYIDVDEIRQGHQ 145 >gi|218128916|ref|ZP_03457720.1| hypothetical protein BACEGG_00488 [Bacteroides eggerthii DSM 20697] gi|217988879|gb|EEC55196.1| hypothetical protein BACEGG_00488 [Bacteroides eggerthii DSM 20697] Length = 700 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 20 IERPSIAIKELIENSLDAESSRVETVIAG--GGKS--FFQITDNGFGMTSEEIP 69 I A+ EL++N DA + V + GK ++ D+G+GM+ E+I Sbjct: 24 ITDRVTALFELVKNCYDANAQNVNVIFENVGAGKKQAVIRVEDDGYGMSFEDIR 77 >gi|331091526|ref|ZP_08340363.1| hypothetical protein HMPREF9477_01006 [Lachnospiraceae bacterium 2_1_46FAA] gi|330403691|gb|EGG83245.1| hypothetical protein HMPREF9477_01006 [Lachnospiraceae bacterium 2_1_46FAA] Length = 373 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 31 IENSLDAESSRVETVIAGGGK-SFFQITDNGFGMTSEEIPMAVQRHCTSK 79 ++N+++ +++V+ + I DNG G+ E++P +R SK Sbjct: 279 VKNAIEHGATKVKISWEENYIYTKISIWDNGEGIDEEDLPHIFERFYKSK 328 >gi|296139306|ref|YP_003646549.1| hypothetical protein Tpau_1589 [Tsukamurella paurometabola DSM 20162] gi|296027440|gb|ADG78210.1| hypothetical protein Tpau_1589 [Tsukamurella paurometabola DSM 20162] Length = 698 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 22 RPSIAIKELIENSLDAESSRVETVIAGGGKSF--FQITDNGFGMTSEEIPM 70 P A+ EL+ N LDA + V I KS ++ D+G GM+ +EI + Sbjct: 27 NPWSALSELVANGLDANAETVYVYIDASIKSNATVEVIDDGDGMSRDEIGL 77 >gi|312114241|ref|YP_004011837.1| hypothetical protein Rvan_1483 [Rhodomicrobium vannielii ATCC 17100] gi|311219370|gb|ADP70738.1| hypothetical protein Rvan_1483 [Rhodomicrobium vannielii ATCC 17100] Length = 664 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 33/190 (17%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS--KI 80 P+ + E++ N+ DA++ V+ I I D+G GM + + R T K Sbjct: 28 PA-VLSEVVANAWDADARNVQVTINRV-AETITIEDDGTGMDRD---GVIDRFLTVGFKR 82 Query: 81 SDDFSNIHTFGFR--GE------ALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVR 132 D+ ++ G + G ++ SI V+ + + T ++ + + Sbjct: 83 RDELGDVTALGRKPMGRKGIGKLSIFSIAQVA--EVFTTLNGERTAFRMDRDIIRKAIAG 140 Query: 133 PVAMNPGTIVEVRDLFFTIP------ARLNFLKSEQVETNLITDVIRRMAIAY-----PK 181 + P R+ K + + + + ++R PK Sbjct: 141 KSENIYRP-----EELTNWPPDLVAGTRIVLSKISRSLSGMTVEGLKRRVARRFSVIGPK 195 Query: 182 VSFTFSTIKS 191 FT + Sbjct: 196 NDFTVQINGN 205 >gi|226223283|ref|YP_002757390.1| hypothetical protein Lm4b_00680 [Listeria monocytogenes Clip81459] gi|225875745|emb|CAS04448.1| Hypothetical protein of unknown function [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 713 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 32/115 (27%) Query: 25 IAIKELIENSLDAESSRVET--VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS- 81 AI ELI N +DA ++++ + K+ +I DNG GM +++ SK Sbjct: 30 SAISELIANGIDARATKISLYMNLIDKEKAVIEIFDNGTGMDYDDLV--------SKYVH 81 Query: 82 ----------DDFSNIHTFGFRGEALPSIGAVSHLT------LMSRPPQNNTGAQ 120 DD G +G IG ++ L L+S+ ++ Sbjct: 82 IGRNKRDEELDDVERNALMGRKG-----IGKLAALNLSQKYYLISKTRNESSLWC 131 >gi|56461707|ref|YP_156988.1| signaling protein [Idiomarina loihiensis L2TR] gi|56180717|gb|AAV83439.1| Predicted signaling protein with an ATPase domain [Idiomarina loihiensis L2TR] Length = 745 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 12/74 (16%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 R+L E++++ + E+ A+ ELI+NS DA+++ + S + D G GM Sbjct: 16 RELGEQLVS---SSEV------ALTELIKNSYDADATSCNVEWSD---SRIVVKDTGHGM 63 Query: 64 TSEEIPMAVQRHCT 77 + ++ R T Sbjct: 64 SLDDFKNKWMRIAT 77 >gi|20807497|ref|NP_622668.1| sensory transduction histidine kinase [Thermoanaerobacter tengcongensis MB4] gi|20516026|gb|AAM24272.1| Sensory transduction histidine kinases [Thermoanaerobacter tengcongensis MB4] Length = 462 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 10/58 (17%) Query: 27 IKE----LIENSLDAESS----RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 IKE L++N+ A+ + +E I G +++ ++ D+G G+ E++P +R Sbjct: 353 IKEVLRILLDNA--AKYTSKNGNIEIEIGSGDEAYIKVKDDGIGIPEEDLPYIFERFY 408 >gi|56554422|pdb|1X9Z|A Chain A, Crystal Structure Of The Mutl C-Terminal Domain gi|56554423|pdb|1X9Z|B Chain B, Crystal Structure Of The Mutl C-Terminal Domain Length = 188 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 3/125 (2%) Query: 400 EATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLT 459 G +H + + + + ++ A L ++ + +Q LL Sbjct: 2 SHMSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQL--TPGEAPVCAQPLLI 59 Query: 460 PEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDE 519 P + + E + + + L LGI + + IR +P L ++N+ L+ ++I Sbjct: 60 PLRLKVSAEEKSALEKAQSALAELGIDFQS-DAQHVTIRAVPLPLRQQNLQILIPELIGY 118 Query: 520 IIDSS 524 + S Sbjct: 119 LAKQS 123 >gi|292490249|ref|YP_003525688.1| hypothetical protein Nhal_0081 [Nitrosococcus halophilus Nc4] gi|291578844|gb|ADE13301.1| hypothetical protein Nhal_0081 [Nitrosococcus halophilus Nc4] Length = 609 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 55/148 (37%), Gaps = 40/148 (27%) Query: 17 GEIIERPSIAIK---------------ELIENSLDAESSRVETV-------IAGGGKSF- 53 GE+I PS+A+K ELI+NS+ A +S VE + + Sbjct: 16 GEVIP-PSLAVKAMRDSGYKNTAYALAELIDNSIQAGASFVEVFCIEKRVLVREQKRRRI 74 Query: 54 --FQITDNGFGMTSEEIPMAVQR----HCTSKISDDFSNIHTFGFRGEAL--PSIGAVSH 105 + DNG GM S + +A+Q H +D I FG L SI Sbjct: 75 AEIAVLDNGTGMDSSILRLALQFGNGTH-----LNDRDGIGRFGM---GLPNASISQCRR 126 Query: 106 LTLMSRPPQNNTGAQIAISGEKISSVRP 133 + + + + + +++ S + Sbjct: 127 VDIWTWQAGPDNAIHTYLDVDEVESGKM 154 >gi|240256429|ref|NP_199891.4| ATP binding [Arabidopsis thaliana] gi|332008608|gb|AED95991.1| Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Arabidopsis thaliana] Length = 819 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 11/71 (15%) Query: 29 ELIENSLD---AESSRVETVIAGG---GKSFFQITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++N+LD + ++ V + G I DNG GM E++ + + SK+ Sbjct: 176 ELLDNALDEVRSGATFVNVDMIQNRKDGSKMILIEDNGGGMNPEKMRHCMSLGYSAKSKL 235 Query: 81 SDDFSNIHTFG 91 +D I +G Sbjct: 236 AD---TIGQYG 243 >gi|168002477|ref|XP_001753940.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694916|gb|EDQ81262.1| predicted protein [Physcomitrella patens subsp. patens] Length = 711 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 6/72 (8%) Query: 26 AIKELIENSLDAESSRVETVIAG------GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 A+ ELI+N+ DA+++R+E I G Q+ DNG GM EEI + Sbjct: 162 AVAELIDNARDAKATRLEISIEDMVLGETGTVPVLQMVDNGLGMNHEEIVKMLSFGHKRP 221 Query: 80 ISDDFSNIHTFG 91 D I FG Sbjct: 222 GESDAEQIGHFG 233 >gi|322385935|ref|ZP_08059576.1| sensor histidine kinase [Streptococcus cristatus ATCC 51100] gi|321270050|gb|EFX52969.1| sensor histidine kinase [Streptococcus cristatus ATCC 51100] Length = 735 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Query: 25 IAIKELIENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMA 71 AI ELI+N+ DA +S++ + G+ +I D+G GM +I A Sbjct: 28 SAILELIKNAYDAGASKLNLIFKKSEDTGRLMLEIIDDGSGMDENDIRQA 77 >gi|170719870|ref|YP_001747558.1| hypothetical protein PputW619_0684 [Pseudomonas putida W619] gi|169757873|gb|ACA71189.1| conserved hypothetical protein [Pseudomonas putida W619] Length = 673 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 P+ + E++ N+ DA++ V I + D+G GM E+ R Sbjct: 34 PA-VVTEIVANAWDADAHTVTVDIQQ---DKIIVQDDGHGMGHGELQARFLR 81 >gi|297539210|ref|YP_003674979.1| DNA topoisomerase [Methylotenera sp. 301] gi|297258557|gb|ADI30402.1| DNA topoisomerase (ATP-hydrolyzing) [Methylotenera sp. 301] Length = 661 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 73/218 (33%), Gaps = 35/218 (16%) Query: 21 ERPSIAIKELIENSLD-A---ESSRVETVIAGGGKSFFQITDNGFGMTSE--------EI 68 E P+ ++E+I+N+ D A ++ ++ I G +++DNG G+ E + Sbjct: 31 ESPTHIVQEVIDNAADEALGGHATTIQVTIFKDGA--VEVSDNGRGIPVEIPKGETQPAV 88 Query: 69 PMAV-QRHCTSKISDDFSNIHTFGFRG----------EALPSIGAVSHLTLMSRPPQNNT 117 + Q H K + N ++ F G AL + L + + Sbjct: 89 ELVFVQLHAGGKFDKEDEN-SSYRFSGGLHGVGVSVTNALST-----RLDVTVKRDGKVH 142 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + + S +V + +I+ A+ Sbjct: 143 SLSFENGNCVTPLTETGKCLKKDTGTTVKCW----PDPKYFDSPKVSLQQLEHLIKSKAV 198 Query: 178 AYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGE 215 VS T S ++ ++ + P+ + ++IGE Sbjct: 199 LLRGVSVTLSIEGNDGFEERSWTYVDGLPQYLDELIGE 236 >gi|261339109|ref|ZP_05966967.1| hypothetical protein ENTCAN_05323 [Enterobacter cancerogenus ATCC 35316] gi|288318946|gb|EFC57884.1| hypothetical protein ENTCAN_05323 [Enterobacter cancerogenus ATCC 35316] Length = 693 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 22/168 (13%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP---MAVQRHCTSK 79 P+ I ELI NS DA++ V IA ITD+G GM+ E+ + + + SK Sbjct: 28 PTNVIAELISNSWDADAQNVWIEIAQ---DKVSITDDGCGMSYTELMNDYLIIGKKKRSK 84 Query: 80 --ISDDFSNIH-TFGFRGEALPSIGAVS------HLTLMSRPPQNNTGAQIAISGEKISS 130 I++ + G +G IG ++ LTL++ + I + K+ S Sbjct: 85 DNITEKTARQRNMMGRKG-----IGKLAPFGIAKKLTLITISKEEKLYNWIQLDLSKMLS 139 Query: 131 VRPVAMNPGTIV-EVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 +I+ E L IP ++E I D ++ Sbjct: 140 EENDDFPNDSIIYEPTILADNIPIEKIDTA-LKLEYKKILDKLKESGT 186 >gi|71483086|gb|AAZ32519.1| DNA topoisomerase VI subunit B [uncultured euryarchaeote Alv-FOS4] Length = 631 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 63/191 (32%), Gaps = 56/191 (29%) Query: 27 IKELIENSLDA--ESS---RVETVIAGGGKS--FFQITDNGFGMTSEEIPMAVQRHCTSK 79 +KE ++NSLDA E+ + I GK + DNG G+ + IP+ K Sbjct: 40 VKEAVDNSLDACEEARILPDITVQIEQVGKDEYRMIVEDNGPGIVRKNIPLVFG-----K 94 Query: 80 ISDDFSNIHTFGFRGEALP-S-------IGAV---SHLT------LMSRPPQNNTGA--- 119 + +G R AL S I AV L+ ++S+ + Sbjct: 95 LL--------YGSRFHALRQSRGQQGIGISAVVLYGQLSTGKPARIISKIKEEEVAYEVL 146 Query: 120 -----QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRR 174 + GT +EV + R N K + + +++ Sbjct: 147 LTIDTKKNAPKIIKEEPVIWDREQGTRIEVV-----MRTRYNRGKQS------VYEYLQQ 195 Query: 175 MAIAYPKVSFT 185 AI P T Sbjct: 196 TAIVNPHAQIT 206 >gi|300777714|ref|ZP_07087572.1| sensor histidine kinase [Chryseobacterium gleum ATCC 35910] gi|300503224|gb|EFK34364.1| sensor histidine kinase [Chryseobacterium gleum ATCC 35910] Length = 389 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 16/82 (19%) Query: 6 LSEKII----NQIAAGEIIERPSIAIKELIENSLDA----ESSRVETVIAGGGKSFFQIT 57 L + N+I +IE L++N++DA + + ++ Sbjct: 272 LPTYTVLVPHNKILISWVIEN-------LVKNAVDAMKGEGAITISV-FERNKNILIEVK 323 Query: 58 DNGFGMTSEEIPMAVQRHCTSK 79 DNG GMT ++ A ++K Sbjct: 324 DNGSGMTKQQARNAFNPGYSTK 345 >gi|222149029|ref|YP_002549986.1| hypothetical protein Avi_2743 [Agrobacterium vitis S4] gi|221736014|gb|ACM36977.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 494 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 18/109 (16%) Query: 22 RPSIAIKELIENSLDAESSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMA--------V 72 P A+ +LI+NS+ A + VE I G + D+G GMT E+ A + Sbjct: 23 SPETALADLIDNSISAGADHVELSIDWNEGNPRIGLLDDGLGMTRGELEDAMRFGGDMDI 82 Query: 73 QRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 +R DD G + S+ LT++SR + Sbjct: 83 ERG-----PDDLGRFG-LGMK---TASLSQCQRLTVVSRKAGHECSMCW 122 >gi|9757986|dbj|BAA96991.2| unnamed protein product [Arabidopsis thaliana] Length = 823 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 11/71 (15%) Query: 29 ELIENSLD---AESSRVETVIAGG---GKSFFQITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++N+LD + ++ V + G I DNG GM E++ + + SK+ Sbjct: 176 ELLDNALDEVRSGATFVNVDMIQNRKDGSKMILIEDNGGGMNPEKMRHCMSLGYSAKSKL 235 Query: 81 SDDFSNIHTFG 91 +D I +G Sbjct: 236 AD---TIGQYG 243 >gi|10956884|ref|NP_049104.1| hypothetical protein pNL1_p056 [Novosphingobium aromaticivorans] gi|146275551|ref|YP_001165712.1| hypothetical protein Saro_3944 [Novosphingobium aromaticivorans DSM 12444] gi|3378317|gb|AAD03900.1| unknown [Novosphingobium aromaticivorans] gi|145322242|gb|ABP64186.1| hypothetical protein Saro_3944 [Novosphingobium aromaticivorans DSM 12444] Length = 533 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 30/126 (23%) Query: 25 IAIKELIENSLD-------------AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 AI+E ++N LD A++ +++ + G I DNG G+ + +A Sbjct: 38 SAIREYLQNGLDAVMQAVDGGIMAFADA-KIDVTLEDDGL---VIRDNGIGLGVD---LA 90 Query: 72 VQR----HCTSKISDDFSNIHTFGFRGEA-LPSIGAVSHLTLMSRPPQNNTGAQIAISGE 126 V R +SK D + GFRG L I L +++ + +I + Sbjct: 91 VSRLTSIGASSK---D-YRVQA-GFRGIGRLAGIAFCDRLVFLTKAQGESECTRIEFNAN 145 Query: 127 KISSVR 132 ++ Sbjct: 146 QLRKDM 151 >gi|188993951|ref|YP_001928203.1| hypothetical protein PGN_0087 [Porphyromonas gingivalis ATCC 33277] gi|188593631|dbj|BAG32606.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 636 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Query: 29 ELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 EL+ N+ DA +++V I G I DNG G+T+EE Sbjct: 36 ELVANAWDAGATKVSVFIPDEYG-DLLVIEDNGNGLTAEEFQ 76 >gi|332288284|ref|YP_004419136.1| DNA mismatch repair protein [Gallibacterium anatis UMN179] gi|330431180|gb|AEC16239.1| DNA mismatch repair protein [Gallibacterium anatis UMN179] Length = 661 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 82/263 (31%), Gaps = 43/263 (16%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 P+ + E++ NS DA+++ V + KS I+DNG GM + +I SK + Sbjct: 23 PA-VLTEIVSNSWDADATEVHIDV-NSDKSIITISDNGHGMNAVDIE--------SKFLN 72 Query: 83 DFSNIH------------TFGFRGE---ALPSIGAVSHLTLMSRPPQNNTGA-------- 119 G +G A+ S+ +++ ++ + A Sbjct: 73 VGYARRKDNREKSPNGRPVMGRKGIGKLAMFSLAN--EVSVFTKTQNDEIVALKVNVSDL 130 Query: 120 ------QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR 173 Q E I+ + GT + + L I +LK I Sbjct: 131 KRAIEEQREYDTEVINDTSSFSKTHGTTIVLAQLERGIKTTATYLKKHLARRFSILGQKF 190 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 + T K+ F + G+ + + + + E++ +N + Sbjct: 191 NFKVFVNNEEITLEHRG-YISKIEFLWSFGDSSQHLKK-DVTQYKKLPNEVSYDNNSFKI 248 Query: 234 QGYTGIPTFNRGNANQFYVFING 256 G+ ++ N Sbjct: 249 SGFIASVGKPSELKDKDNDISNN 271 >gi|313202497|ref|YP_004041154.1| ATP-binding region ATPase domain protein [Paludibacter propionicigenes WB4] gi|312441813|gb|ADQ78169.1| ATP-binding region ATPase domain protein [Paludibacter propionicigenes WB4] Length = 547 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Query: 22 RPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQ 73 P A++E ++N +DA + ++ I K+ I D+G GM + A + Sbjct: 26 DPKDALREYVQNGVDAGAKSIQIRIR---KNTISIDDDGIGMDQTTLRKAAR 74 >gi|126465879|ref|YP_001040988.1| DNA topoisomerase VI subunit B [Staphylothermus marinus F1] gi|126014702|gb|ABN70080.1| DNA topoisomerase VI, B subunit [Staphylothermus marinus F1] Length = 531 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 13/66 (19%) Query: 22 RPSIA----IKELIENSLDA-ESS----RVETVIAGGGK----SFFQITDNGFGMTSEEI 68 P+ A I+EL+EN+LDA ++ ++ I + + DNG G+ + Sbjct: 31 NPARALYQTIRELVENALDATDAHGILPNIKVTIEKADQIHEYYKITVEDNGIGIPPHIV 90 Query: 69 PMAVQR 74 P A R Sbjct: 91 PEAFGR 96 >gi|254443594|ref|ZP_05057070.1| hypothetical protein VDG1235_1830 [Verrucomicrobiae bacterium DG1235] gi|198257902|gb|EDY82210.1| hypothetical protein VDG1235_1830 [Verrucomicrobiae bacterium DG1235] Length = 1483 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 8/77 (10%) Query: 18 EIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 + R + EL++N+ DA ++ I F +G E++ + Sbjct: 39 TVASRVQHVVSELLQNADDAGATCARIEIEE---DNFVFRHDGADFEPEQLEALCSFAVS 95 Query: 78 SKISDDFSNIHTFGFRG 94 SK I T GFRG Sbjct: 96 SK-----HTIKTTGFRG 107 >gi|325965497|ref|YP_004243401.1| DNA mismatch repair enzyme (predicted ATPase) [Arthrobacter phenanthrenivorans Sphe3] gi|323471584|gb|ADX75267.1| DNA mismatch repair enzyme (predicted ATPase) [Arthrobacter phenanthrenivorans Sphe3] Length = 485 Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 10/110 (9%) Query: 22 RPSIAIKELIENSLDAESSRVET--VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 A+ +LI+NS+ AE+ + + G + I D+G GMT + A++ T Sbjct: 22 SLEAAVADLIDNSITAEADHIVIDADVVEG--KYLAILDDGSGMTPRDAREALRLAGTVG 79 Query: 80 ISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEK 127 D G G L S+ LTL+++ T + I + Sbjct: 80 DRKDTD----LGRFGLGLKTASLSQARCLTLITKHAGTVTALRWDIDFVR 125 >gi|269215582|ref|ZP_06159436.1| conserved hypothetical protein [Slackia exigua ATCC 700122] gi|269131069|gb|EEZ62144.1| conserved hypothetical protein [Slackia exigua ATCC 700122] Length = 360 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 8/102 (7%) Query: 29 ELIENSLDAESSRV--ETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDF-- 84 EL+ N+ DA + + T ++ ++ + D+G G+ + TSK+ D Sbjct: 58 ELLRNARDAGARTIFFATSLSKNRRTMVIV-DDGAGIPERMWDAVFEPRVTSKL-DALRF 115 Query: 85 SNIHTFGFRGEALPSIGA-VSHLTLMSRPPQNNTGAQIAISG 125 + G RG AL SI VS +M P T ++ I Sbjct: 116 DDWGVHG-RGMALYSISQNVSSARVMQSVPSQGTAVRVDIDP 156 >gi|298374833|ref|ZP_06984791.1| two-component system sensor histidine kinase [Bacteroides sp. 3_1_19] gi|298269201|gb|EFI10856.1| two-component system sensor histidine kinase [Bacteroides sp. 3_1_19] Length = 856 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 EL++NS DA + +V + +I DNG GM+ ++ Sbjct: 31 ELVKNSYDAHAKKVVITFE---TNSIRIVDNGKGMSFNDLQ 68 Score = 37.3 bits (85), Expect = 7.4, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%) Query: 30 LIENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSE 66 LI NS A + ++ GK F +DNG G+ Sbjct: 762 LISNSKKAGAKKIYVDFKKENGKLFVDFSDNGCGVEEA 799 >gi|167566501|ref|ZP_02359417.1| hypothetical protein BoklE_28346 [Burkholderia oklahomensis EO147] Length = 377 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 16 AGEIIERPSIAIKELIENSLDAESSRVETVIAGG-GKSFFQITDNGFGMTSEEIP 69 AG II PS AI EL+ N DA ++ V+ F I+DNG GMT E Sbjct: 17 AGAIITNPSTAIVELVANCWDAYATEVKISWPDPKNNKQFSISDNGKGMTKAEFD 71 >gi|212693076|ref|ZP_03301204.1| hypothetical protein BACDOR_02583 [Bacteroides dorei DSM 17855] gi|212664362|gb|EEB24934.1| hypothetical protein BACDOR_02583 [Bacteroides dorei DSM 17855] Length = 490 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 14/150 (9%) Query: 1 MKIRKLSEKIINQI-AAGEIIE-------RPSIAIKELIENSLDAESSRVET-VIAGGGK 51 M+I S + N I A +IE A+ ++I+NS+ A + V G K Sbjct: 1 MRIDYDSLRTANAIPCAASMIETFRAIGYNIETAVADIIDNSISANAKNVWVTRHWHGDK 60 Query: 52 SFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTLM 109 SF I D+G GM S+EI A++ S + + + G G L S LT++ Sbjct: 61 SFITIKDDGCGMNSQEIIDAMRPGSHSPLEE--RSKTDLGRFGLGLKTASFSQCRKLTVL 118 Query: 110 SRPPQNNTGAQIAISGEKISSVRPVAMNPG 139 S+ ++ + ++ + Sbjct: 119 SKKSGYHSAY-WTWDLDYVAQTNEWTLLQW 147 >gi|242278606|ref|YP_002990735.1| histidine kinase [Desulfovibrio salexigens DSM 2638] gi|242121500|gb|ACS79196.1| histidine kinase [Desulfovibrio salexigens DSM 2638] Length = 579 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 7/69 (10%) Query: 18 EIIER---PSIAIKELIENSL----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 E++ + LI N+ D + + G+ F + DNG G+ ++ Sbjct: 461 EVVTDRGKLEQVLLNLINNAFQAMKDGGALWIRVERGDEGQVLFSVKDNGCGIPESDLKR 520 Query: 71 AVQRHCTSK 79 + ++K Sbjct: 521 IFEPFYSTK 529 >gi|328955568|ref|YP_004372901.1| ATP-binding region ATPase domain protein [Coriobacterium glomerans PW2] gi|328455892|gb|AEB07086.1| ATP-binding region ATPase domain protein [Coriobacterium glomerans PW2] Length = 360 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 7/79 (8%) Query: 26 AIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD-- 82 + E++ N+ DA ++ + DNG G+ ++ TSK+ + Sbjct: 53 IVIEMLRNARDAGATEIYVATGKDEDIRTLVFIDNGGGIPADMQERIFDARVTSKLENMK 112 Query: 83 -DFSNIHTFGFRGEALPSI 100 D +H G RG AL SI Sbjct: 113 MDRWGVH--G-RGMALFSI 128 >gi|326802621|ref|YP_004320439.1| DNA gyrase, B subunit [Aerococcus urinae ACS-120-V-Col10a] gi|326650211|gb|AEA00394.1| DNA gyrase, B subunit [Aerococcus urinae ACS-120-V-Col10a] Length = 660 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + +++ I G + DNG G+ + Sbjct: 67 EIVDNSIDEALAGYADKIDIKIESDG--SITVIDNGRGIPVD 106 >gi|89114228|gb|ABD61709.1| DNA gyrase subunit B [Acholeplasma oculi] Length = 594 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S + + G Q+TDNG G+ + Sbjct: 30 EIVDNSIDEALAGYASEITIEVQKGNI--IQVTDNGRGIPVD 69 >gi|89114226|gb|ABD61708.1| DNA gyrase subunit B [Acholeplasma oculi] gi|89114230|gb|ABD61710.1| DNA gyrase subunit B [Acholeplasma oculi] Length = 594 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S + + G Q+TDNG G+ + Sbjct: 30 EIVDNSIDEALAGYASEITIEVQKGNI--IQVTDNGRGIPVD 69 >gi|331000410|ref|ZP_08324085.1| hypothetical protein HMPREF9439_01728 [Parasutterella excrementihominis YIT 11859] gi|329571742|gb|EGG53422.1| hypothetical protein HMPREF9439_01728 [Parasutterella excrementihominis YIT 11859] Length = 469 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 17/135 (12%) Query: 7 SEKIINQIAAGEII-ERPSIAIKELIENSLDAESSRVETVIAGGGKS--FFQITDNGFGM 63 N I + I + A+ ++++NS+ A + + A F +I D+G GM Sbjct: 9 PPSPSNLITSLCSIGYDLNSAVADILDNSIAAGAKNIYVDFALHESKEVFLKIEDDGCGM 68 Query: 64 TSEEIPMAVQRHC-----TSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNN 116 E+ A++ T KISD G G L S+ L + S+ Q Sbjct: 69 KRLELLRAMRFGSFDPRQTRKISD-------LGQFGLGLKTASLSQSDRLVVRSKSDQEA 121 Query: 117 TGAQIAISGEKISSV 131 + + + + Sbjct: 122 SCFEWNLDLVRKKDR 136 >gi|88813626|ref|ZP_01128857.1| hypothetical protein NB231_12961 [Nitrococcus mobilis Nb-231] gi|88789131|gb|EAR20267.1| hypothetical protein NB231_12961 [Nitrococcus mobilis Nb-231] Length = 603 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 50/140 (35%), Gaps = 32/140 (22%) Query: 16 AGEIIERPSIAIK---------------ELIENSLDAESSRVE-------TVIAGGGKSF 53 AGE+I PS+A+K ELI+NS+ A++ VE + + Sbjct: 9 AGEVIP-PSLAVKAMRDSGYKNTAYALAELIDNSIQAKADLVEVFCVERKIFVKQRERKR 67 Query: 54 FQ---ITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTL 108 + DNG GM + + +A+Q ++ G G L SI + + Sbjct: 68 IVEIGVLDNGKGMDAATLRLALQFGN----GTHLADRSGIGRFGMGLPNASISQCRRVDV 123 Query: 109 MSRPPQNNTGAQIAISGEKI 128 + + + I Sbjct: 124 WTWQAGPDNALHTCLDINDI 143 >gi|110598538|ref|ZP_01386807.1| PAS:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A-like [Chlorobium ferrooxidans DSM 13031] gi|110339842|gb|EAT58348.1| PAS:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A-like [Chlorobium ferrooxidans DSM 13031] Length = 596 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 13/101 (12%) Query: 26 AIKELIENSL---DAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 ++ L++N++ DAE ++ G + DNG G++ +++ +R Sbjct: 484 VVRNLLDNAIKYVDAEHGKIRISAFRNGDFVQLDVEDNGIGISKQDLGRIFERFY----R 539 Query: 82 DDFSNIHTFGFRGEALP-----SIGAVSHLTLMSRPPQNNT 117 D + G G L + H+ + SR Q + Sbjct: 540 VDKARSRELGGTGLGLAIVKHIVLAHKGHVEVRSRVSQGSV 580 >gi|310826824|ref|YP_003959181.1| sensor histidine kinase [Eubacterium limosum KIST612] gi|308738558|gb|ADO36218.1| sensor histidine kinase [Eubacterium limosum KIST612] Length = 415 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Query: 26 AIKELIENSLDAESS--RVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 A+ LI+N+LD S+ + + + DNG G+ E+I +R S+ S Sbjct: 311 AVSNLIKNALDHTSTGGWIAVGWDESAAVTRITVQDNGSGIHPEDIHHIFKRFYRSRFSQ 370 Query: 83 D 83 D Sbjct: 371 D 371 >gi|291278519|ref|YP_003495354.1| hypothetical protein DEFDS_0086 [Deferribacter desulfuricans SSM1] gi|290753221|dbj|BAI79598.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1] Length = 473 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 5/55 (9%) Query: 30 LIENSLDAESS----RVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI NSLDA + ++ + +I DNG G+ +I T+K Sbjct: 377 LINNSLDALCNETNNTIKINLETNTNFKILEIIDNGCGIPKSDIAKLFTPFYTTK 431 >gi|206896389|ref|YP_002246773.1| periplasmic sensor signal transduction histidine kinase, putative [Coprothermobacter proteolyticus DSM 5265] gi|206739006|gb|ACI18084.1| periplasmic sensor signal transduction histidine kinase, putative [Coprothermobacter proteolyticus DSM 5265] Length = 535 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 25 IAIKELIENSLDAESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTSK 79 + L+ N+ DA +++V G++ ++ +NG + E++ + T+K Sbjct: 433 QIVSNLVGNAFDAGATQVWVEARREGQNLVLRVANNGTPIPQEDLGKIFEPFYTTK 488 >gi|323498028|ref|ZP_08103036.1| DNA topoisomerase IV subunit B [Vibrio sinaloensis DSM 21326] gi|323316904|gb|EGA69907.1| DNA topoisomerase IV subunit B [Vibrio sinaloensis DSM 21326] Length = 626 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 78/208 (37%), Gaps = 29/208 (13%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EI 68 ERP+ +E+I+NS+D A + +++ ++ ++ D+G GM + + Sbjct: 30 ERPNHLAQEVIDNSVDEALAGHAKKIKVILHAD--QSLEVIDDGRGMPVDIHPEKGISGV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAIS 124 + + + H K S+D + G G + + A+S + + + + + Sbjct: 88 ELILTKLHAGGKFSNDNYK-FSGGLHGVGISVVNALSKRVEVTVKREGQVHEIAFEHGNA 146 Query: 125 GEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 +++ N GT V + S + + + + +R A+ P + Sbjct: 147 VTELTVTGTCGHRNTGTSVHFW-------PDAKYFDSYKFSSLRLVNNLRAKAVLCPGLE 199 Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQ 211 TFS + + + +++ Sbjct: 200 ITFS--DKVNNEEHKWFYEDGLKDYLAE 225 >gi|228478363|ref|ZP_04062971.1| conserved hypothetical protein [Streptococcus salivarius SK126] gi|228250042|gb|EEK09312.1| conserved hypothetical protein [Streptococcus salivarius SK126] Length = 698 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 18/107 (16%) Query: 25 IAIKELIENSLDAESSRVETVIA--GGGKSFFQITDNGFGMTSEEIPM---AVQRHCTSK 79 AI ELI N LDA ++ V+ I S +I DNG GM ++ + R+ + Sbjct: 29 SAISELIANGLDAGATNVKLYIESIDKENSKLEILDNGSGMDYVDLATKYALIGRNR--R 86 Query: 80 ISDDFSNIHTFGFRGEALPSIGAVSHL------TLMSRPPQNNTGAQ 120 IS+ + T G +G IG ++ L ++S+ T Sbjct: 87 ISNGEFSEKTKGRKG-----IGKLATLFLSKKYYIVSKKNGIETAWM 128 >gi|92119234|ref|YP_578963.1| histidine kinase [Nitrobacter hamburgensis X14] gi|91802128|gb|ABE64503.1| histidine kinase [Nitrobacter hamburgensis X14] Length = 946 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 17/136 (12%) Query: 25 IAIKELIENSLDAESSRVETVIAGGG--KSFFQITDNGFGMTSEEIPMAVQRHCT-SKI- 80 A+ EL++N DA++++V+ + ++ +I DNG GM E++ R T +K+ Sbjct: 255 TAVAELVKNGYDADATQVDLIFNTASAPQTSLEIYDNGSGMNIEQLEAGFMRLSTPNKVE 314 Query: 81 --SDDFSNIHTFGFRGEALPSIGAVS------HLTLMSRPPQNNTGAQIAISGEKISSVR 132 + G +G IG + L L + G ++ I ++ + R Sbjct: 315 HSRSELFARQKAGRKG-----IGRFAAQRLGRRLVLETTTHSARNGLRLDIDWDEFVANR 369 Query: 133 PVAMNPGTIVEVRDLF 148 ++ P I ++ F Sbjct: 370 NLSAVPSKITRIKKPF 385 >gi|226307538|ref|YP_002767498.1| hypothetical protein RER_40510 [Rhodococcus erythropolis PR4] gi|226186655|dbj|BAH34759.1| hypothetical protein RER_40510 [Rhodococcus erythropolis PR4] Length = 505 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQ--ITDN 59 KI E + I I + A+ +LI+NSLDA +S V G + DN Sbjct: 13 KILAADESLAGAIGLHHTI---ATALADLIDNSLDASASHVLIRFVQDGTRIVSMMVIDN 69 Query: 60 GFGMTSEEIPMA 71 G GM S+ I A Sbjct: 70 GSGMDSDTIDAA 81 >gi|300861451|ref|ZP_07107535.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|300848912|gb|EFK76665.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] Length = 483 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 5/102 (4%) Query: 31 IENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTF 90 ++NS+ A ++R++ + + I DNG+GM+ E+ A++ S+ D Sbjct: 33 VDNSVSASATRIDINF-NNQQKYVSILDNGYGMSKIELLQAMK--YGSRSIYDLRTQDDL 89 Query: 91 GFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISS 130 G G L S LT++S +GA + K + Sbjct: 90 GRFGLGLKMASFSQCRKLTVVSIKDGEYSGAVWDLDVVKKKN 131 >gi|315225745|ref|ZP_07867533.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Parascardovia denticolens DSM 10105] gi|315119877|gb|EFT83009.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Parascardovia denticolens DSM 10105] Length = 701 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A ++ +E I G ++ D+G G+ +E+P Sbjct: 76 VYEIVDNSVDEALAGYATHIEVTILEDNG---IRVVDDGRGIPVDEVP 120 >gi|294786215|ref|ZP_06751469.1| DNA gyrase, B subunit [Parascardovia denticolens F0305] gi|294485048|gb|EFG32682.1| DNA gyrase, B subunit [Parascardovia denticolens F0305] Length = 704 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A ++ +E I G ++ D+G G+ +E+P Sbjct: 79 VYEIVDNSVDEALAGYATHIEVTILEDNG---IRVVDDGRGIPVDEVP 123 >gi|229815361|ref|ZP_04445696.1| hypothetical protein COLINT_02407 [Collinsella intestinalis DSM 13280] gi|229809141|gb|EEP44908.1| hypothetical protein COLINT_02407 [Collinsella intestinalis DSM 13280] Length = 362 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 8/110 (7%) Query: 20 IERPSIAIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 I+ + E++ N+ DA + + G D+G G+ + TS Sbjct: 47 IQHVEDIVVEMLRNARDAGARNIYLATSKEEGVRTLLFLDDGSGVPEDMRDRIFDARVTS 106 Query: 79 KISD---DFSNIHTFGFRGEALPSIGAVSHL-TLMSRPPQNNTGAQIAIS 124 K+ D +H G RG AL SI + +++ + ++ + Sbjct: 107 KLESMRMDKWGVH--G-RGMALFSIRQNTQTAEVVTSAQGGGSSFRVVVD 153 >gi|126668219|ref|ZP_01739180.1| DNA gyrase subunit B [Marinobacter sp. ELB17] gi|126627368|gb|EAZ98004.1| DNA gyrase subunit B [Marinobacter sp. ELB17] Length = 804 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 78/253 (30%), Gaps = 38/253 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE----------EIPMAVQR 74 EL++NS+D A + + I + DNG G+ + E+ M V Sbjct: 43 ELVDNSIDEALAGHCTEIGIRIHPD--ESVSVHDNGRGIPVDLHEGEGISAAEVIMTVL- 99 Query: 75 HCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKI 128 H K D+ + + G G AL S+ LTL R ++ Sbjct: 100 HAGGKFDDNTYKV-SGGLHGVGVSVVNALSSV-----LTLTIRRSG-----KVYEQTYNH 148 Query: 129 SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFST 188 G+ IP+ F + + ++ +R +A V + Sbjct: 149 GVPAAPLHEVGSTDASGTKVHFIPSEATFT-NIKFHYEILAKRVRELAFLNSGVRIRLTD 207 Query: 189 IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNAN 248 +S + ++ G + + N V + E ++ + N Sbjct: 208 ERSGKEEL--FEYEGGLRAFVEHLNTNKTPINRVFYFTQQREDGIEVEVAMQW-NDAFQE 264 Query: 249 QFYVFINGRTVQD 261 Y F N +D Sbjct: 265 NIYCFTNNIPQRD 277 >gi|51571927|ref|NP_001003994.1| MORC family CW-type zinc finger 2 [Danio rerio] gi|51329843|gb|AAH80267.1| MORC family CW-type zinc finger 2 [Danio rerio] Length = 1035 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++NS DA ++R++ GG + D+G GM E +Q +SK + Sbjct: 35 ELVDNSRDANATRIDIYTEKRPDLRGGFMLCFL-DDGTGMEPSEATHVIQFGKSSKRFPE 93 Query: 84 FSNIHTFG 91 ++I +G Sbjct: 94 STHIGQYG 101 >gi|115524183|ref|YP_781094.1| hypothetical protein RPE_2170 [Rhodopseudomonas palustris BisA53] gi|115518130|gb|ABJ06114.1| hypothetical protein RPE_2170 [Rhodopseudomonas palustris BisA53] Length = 533 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 9/97 (9%) Query: 25 IAIKELIENSLDAESSRVETVIAG--GGKSF-FQITDNGFGMTSEEIPMAVQRHCTSKIS 81 AI EL++NSL+A + R++ + G F + D+G GM + + A++ T++ + Sbjct: 46 SAIAELVDNSLEASARRIDIHVRKSTAGDDFEVSVLDDGTGMDAGTLTEALRFGGTTRFN 105 Query: 82 DDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNN 116 + G G L S+ + + + + Sbjct: 106 ----SRKGLGRFGMGLPNASLSQAKRVDVFTWQSGES 138 >gi|315182483|gb|ADT89396.1| C4-dicarboxylate transport sensor protein, hypothetical [Vibrio furnissii NCTC 11218] Length = 690 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAE----SSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA + ++ + ++ DNG G+T E++ + Sbjct: 579 QRLRQVLGNLVTNALDAMQEQPAPKLIISAVVDADTVLLRVRDNGCGITEEQLTTIFEPF 638 Query: 76 CTSK 79 TSK Sbjct: 639 QTSK 642 >gi|169836509|ref|ZP_02869697.1| DNA gyrase subunit B [candidate division TM7 single-cell isolate TM7a] Length = 660 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 IKE+ +NS+D A ++RV+ I GG +TD+G G+ + Sbjct: 44 IKEIADNSIDEAIAGFATRVDVKILKDGG---ITVTDDGRGIPVD 85 >gi|167625475|ref|YP_001675769.1| putative DNA mismatch repair protein [Shewanella halifaxensis HAW-EB4] gi|167355497|gb|ABZ78110.1| putative DNA mismatch repair protein [Shewanella halifaxensis HAW-EB4] Length = 669 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 20 IERPSIAIKELIENSLDAESSRVETVIAGG-GKSFFQITDNGFGMTSEE 67 I P I EL+ N DA+++ V + G G + + DNG G+ +E+ Sbjct: 24 INTPEQVIFELVANGFDAKATTVNVITEGDIGTNQVVVLDNGVGINAED 72 >gi|152983647|ref|YP_001351625.1| putative two-component sensor [Pseudomonas aeruginosa PA7] gi|150958805|gb|ABR80830.1| probable two-component sensor [Pseudomonas aeruginosa PA7] Length = 586 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAESSR----VETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + + + + GG + DNG G+ +E++ Sbjct: 474 RLEQVLVNLLRNALDAVAGQERPWIRLAVQRVGGDWVLSVADNGGGIPAEDLGSVFDPFF 533 Query: 77 TSK 79 T+K Sbjct: 534 TTK 536 >gi|261366292|ref|ZP_05979175.1| two-component sensor histidine kinase [Subdoligranulum variabile DSM 15176] gi|282571890|gb|EFB77425.1| two-component sensor histidine kinase [Subdoligranulum variabile DSM 15176] Length = 540 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 8/58 (13%) Query: 30 LIENSLDA-ESS------RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTSK 79 LIEN+ DA ++ ++ + + + DN GM E +R TSK Sbjct: 437 LIENAFDAFGNTPSDTLHEIDVSVRESERGLILSVDDNACGMPEEVREHIFERGSTSK 494 >gi|157150767|ref|YP_001449944.1| hypothetical protein SGO_0641 [Streptococcus gordonii str. Challis substr. CH1] gi|157075561|gb|ABV10244.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein protein [Streptococcus gordonii str. Challis substr. CH1] Length = 816 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 5/58 (8%) Query: 26 AIKELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 A+ ELI+NS DA+++ I G+ I D+G GMT I A + TS Sbjct: 29 ALLELIKNSSDADANYCNIEIDTLYQSEHGQGRIIIEDDGNGMTPYIIENAFLKIATS 86 >gi|300313370|ref|YP_003777462.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1] gi|300076155|gb|ADJ65554.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1] Length = 659 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 3/50 (6%) Query: 29 ELIENSLDAESSRVETVIAG---GGKSFFQITDNGFGMTSEEIPMAVQRH 75 EL+ N LDA + +V I GG + DNG G+ + I R Sbjct: 32 ELVWNGLDARAHQVSVHIEDTELGGTDVVTVLDNGDGINIDNISDNFGRF 81 >gi|152994000|ref|YP_001359721.1| hypothetical protein SUN_2430 [Sulfurovum sp. NBC37-1] gi|151425861|dbj|BAF73364.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 485 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 11/101 (10%) Query: 31 IENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD--FSNI 87 ++NS+ A++S V I+ S+ I DNG GM E++ R+ S S D Sbjct: 35 VDNSITAQASEVHIYISFQMQDSYIAIVDNGIGMNKEDL-----RNAMSLGSFDPLLERE 89 Query: 88 H-TFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISG 125 H G G L S S LT++S+ + + Sbjct: 90 HKDLGRFGLGLKTASFSQSSKLTVVSKQEKEINARCWDLEH 130 >gi|126459555|ref|YP_001055833.1| DNA topoisomerase VI subunit B [Pyrobaculum calidifontis JCM 11548] gi|126249276|gb|ABO08367.1| DNA topoisomerase VI, B subunit [Pyrobaculum calidifontis JCM 11548] Length = 526 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 14/67 (20%) Query: 27 IKELIENSLDAESSR---------VETVIAGGGKSFFQI--TDNGFGMTSEEIPMAVQR- 74 I+EL ENSLDA + + I KS+ + DNG G+ +EIP R Sbjct: 35 IRELTENSLDA--TETYGILPTVYLRVKIEDEQKSWVSVYAEDNGIGIPGDEIPNVFGRV 92 Query: 75 HCTSKIS 81 +SK Sbjct: 93 FYSSKYR 99 >gi|328951187|ref|YP_004368522.1| integral membrane sensor signal transduction histidine kinase [Marinithermus hydrothermalis DSM 14884] gi|328451511|gb|AEB12412.1| integral membrane sensor signal transduction histidine kinase [Marinithermus hydrothermalis DSM 14884] Length = 477 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 30 LIENSLDAESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHC 76 L+ N++ A + + G+ Q+ D+G G+ E +P +R Sbjct: 372 LVNNAIKAGARTITLRARSLGEKVVVQVVDDGPGIPPEHLPYLFERFY 419 >gi|86141747|ref|ZP_01060271.1| Histidine Kinase [Leeuwenhoekiella blandensis MED217] gi|85831310|gb|EAQ49766.1| Histidine Kinase [Leeuwenhoekiella blandensis MED217] Length = 742 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVET-----VIAGGGKSFFQI 56 KIR + ++I+ I + ++I A+ EL++NS DA++++V+ I I Sbjct: 8 KIRP-AARLIHTIGS-DLIGDSYAALVELVKNSYDADATKVDIVFKYTEIDNEQALIISI 65 Query: 57 TDNGFGMTSE 66 D+G GM + Sbjct: 66 KDDGHGMDFD 75 >gi|242096394|ref|XP_002438687.1| hypothetical protein SORBIDRAFT_10g024390 [Sorghum bicolor] gi|241916910|gb|EER90054.1| hypothetical protein SORBIDRAFT_10g024390 [Sorghum bicolor] Length = 758 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 24/97 (24%) Query: 4 RKLSEKIINQIAAGE---IIERPS--------------IAIKELIENSLDAESSRVETVI 46 R L+ + +IA+ ++ PS AI ELI+NS DA +SR+ I Sbjct: 242 RVLNPVVKMRIASPTKNFVVADPSYLRTLSQTHASWMFGAIAELIDNSRDAGASRLSISI 301 Query: 47 A-----GGGKSF--FQITDNGFGMTSEEIPMAVQRHC 76 K + D+G GMT ++ + Sbjct: 302 EHLFSKKAQKKIPVLSVIDDGHGMTYPDMMRMISFGH 338 >gi|218889614|ref|YP_002438478.1| putative two-component sensor [Pseudomonas aeruginosa LESB58] gi|218769837|emb|CAW25597.1| probable two-component sensor [Pseudomonas aeruginosa LESB58] Length = 434 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Query: 17 GEII-ERPSI---AIKELIENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 G +I RP + L++N+L A ++R+E G + Q+ DNG G+ +EE+ Sbjct: 321 GAVIDTRPHALRRVLVNLVDNALKFAGAARLEVERRTDGGTRIQVLDNGPGIPAEELDEV 380 Query: 72 VQRHC 76 ++ Sbjct: 381 LKPFY 385 >gi|254236990|ref|ZP_04930313.1| hypothetical protein PACG_03015 [Pseudomonas aeruginosa C3719] gi|126168921|gb|EAZ54432.1| hypothetical protein PACG_03015 [Pseudomonas aeruginosa C3719] Length = 434 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Query: 17 GEII-ERPSI---AIKELIENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 G +I RP + L++N+L A ++R+E G + Q+ DNG G+ +EE+ Sbjct: 321 GAVIDTRPHALRRVLVNLVDNALKFAGAARLEVERRTDGGTRIQVLDNGPGIPAEELDEV 380 Query: 72 VQRHC 76 ++ Sbjct: 381 LKPFY 385 >gi|15599297|ref|NP_252791.1| BfmS [Pseudomonas aeruginosa PAO1] gi|107103619|ref|ZP_01367537.1| hypothetical protein PaerPA_01004689 [Pseudomonas aeruginosa PACS2] gi|254242787|ref|ZP_04936109.1| hypothetical protein PA2G_03553 [Pseudomonas aeruginosa 2192] gi|9950303|gb|AAG07489.1|AE004826_7 BfmS [Pseudomonas aeruginosa PAO1] gi|126196165|gb|EAZ60228.1| hypothetical protein PA2G_03553 [Pseudomonas aeruginosa 2192] Length = 434 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Query: 17 GEII-ERPSI---AIKELIENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 G +I RP + L++N+L A ++R+E G + Q+ DNG G+ +EE+ Sbjct: 321 GAVIDTRPHALRRVLVNLVDNALKFAGAARLEVERRTDGGTRIQVLDNGPGIPAEELDEV 380 Query: 72 VQRHC 76 ++ Sbjct: 381 LKPFY 385 >gi|146276766|ref|YP_001166925.1| integral membrane sensor signal transduction histidine kinase [Rhodobacter sphaeroides ATCC 17025] gi|145555007|gb|ABP69620.1| integral membrane sensor signal transduction histidine kinase [Rhodobacter sphaeroides ATCC 17025] Length = 604 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 R I L+ N+LDA S +++ V+A G + + DNG G+ E++ + T Sbjct: 494 RLEQVIINLLRNALDATKGVASPQIDIVLAAGETATLTVRDNGQGI--EDLDNLFEPFYT 551 Query: 78 SK 79 +K Sbjct: 552 TK 553 >gi|313900991|ref|ZP_07834481.1| DNA gyrase, B subunit [Clostridium sp. HGF2] gi|312954411|gb|EFR36089.1| DNA gyrase, B subunit [Clostridium sp. HGF2] Length = 647 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ +E I ++ DNG GM Sbjct: 56 EIVDNSIDEALAGFATDIEITIEKNNI--IRVEDNGRGMP 93 >gi|261368839|ref|ZP_05981722.1| DNA gyrase, B subunit [Subdoligranulum variabile DSM 15176] gi|282569109|gb|EFB74644.1| DNA gyrase, B subunit [Subdoligranulum variabile DSM 15176] Length = 662 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G Q++DNG G+ + Sbjct: 53 VYEIVDNSIDEALAGYCTHIEVTIKPGNI--IQVSDNGRGIPVD 94 >gi|261819991|ref|YP_003258097.1| hypothetical protein Pecwa_0666 [Pectobacterium wasabiae WPP163] gi|261604004|gb|ACX86490.1| conserved hypothetical protein [Pectobacterium wasabiae WPP163] Length = 795 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 16/93 (17%) Query: 6 LSEKIINQI---AAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 L +II+ I AG A+ EL+ NS+DA++S V ++ G + TD+G G Sbjct: 7 LDPQIIHHIIYSQAG----SLGKALIELLMNSVDAQASSVLLTVSQEGFTC---TDDGHG 59 Query: 63 M-TSEEIPMAVQRHCTSKISDDFSNIHTFG-FR 93 + +++ R T I D T+G FR Sbjct: 60 FASRDDVVNYFGRFGTPHIEGD----ATYGRFR 88 >gi|323704272|ref|ZP_08115851.1| histidine kinase [Thermoanaerobacterium xylanolyticum LX-11] gi|323536338|gb|EGB26110.1| histidine kinase [Thermoanaerobacterium xylanolyticum LX-11] Length = 181 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 10/60 (16%) Query: 28 KEL-------IENSLDAESSRVETVIA-GGGKSFFQ--ITDNGFGMTSEEIPMAVQRHCT 77 KEL +NS+ A + + + K F + I D+G GM E + A T Sbjct: 2 KELSLYILDIAQNSIKAGAKNISIKLEIDHKKDFMRLSIEDDGCGMDEELLKKAFDPFTT 61 >gi|302340082|ref|YP_003805288.1| signal transduction histidine kinase regulating citrate/malate metabolism [Spirochaeta smaragdinae DSM 11293] gi|301637267|gb|ADK82694.1| signal transduction histidine kinase regulating citrate/malate metabolism [Spirochaeta smaragdinae DSM 11293] Length = 527 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 13/69 (18%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLD----AESSRVETVIAGGGKSF-FQI 56 I L E + +E I LIEN+LD A++ +++ + + + Sbjct: 405 SIHTLPEGMR--------VESLVSVIGNLIENALDALIPAKNGKIDVRLIEDESNLEITV 456 Query: 57 TDNGFGMTS 65 +DNG G+ Sbjct: 457 SDNGPGIRP 465 >gi|194380672|dbj|BAG58489.1| unnamed protein product [Homo sapiens] Length = 756 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 100/278 (35%), Gaps = 31/278 (11%) Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQGYT 237 P + F K+ ++ +S + + V+G +NN + + + ++I L G+ Sbjct: 8 PDLRIVFVHNKAVIWQ---KSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFL 64 Query: 238 GIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLLLE 289 + + ++FIN R V K IL IR Y YPV L ++ Sbjct: 65 PKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKID 124 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSVLS 338 + VDVN+ P KS + +N + + + NK +S + ++ Sbjct: 125 VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVL 184 Query: 339 KKMISS---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTYSE 391 K + F++ + + TS+ Q + E+ +T+D L D Y Sbjct: 185 SKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGH 244 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + + ++ SQT Sbjct: 245 CSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCF 282 Score = 37.0 bits (84), Expect = 9.6, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 102/301 (33%), Gaps = 29/301 (9%) Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 R + ++ I Q Q ++ + + H+ ++ PK L + EK Sbjct: 454 RYNSQMKRAIEQESQMSLKDGRKKIKPTSAWNLAQK-HKLKTSLSNQPKLDELLQSQIEK 512 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 Q ++ + + + V+ E L + + + +++ Sbjct: 513 RRSQNIKMVQIPFSMKNLKINFKKQNKVDLEEKDEPCLIHNLR--FPDAWLMTSKTEVML 570 Query: 429 VDQHAAHERLIFEKMRQDFN--STKITSQTLLTPEIIDLLEGECALIMEHDED------- 479 ++ + E L+F+++ ++ + + +LT + + L +D Sbjct: 571 LNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTESLFNGSHYLDVLYKMTADDQRYSGST 630 Query: 480 ------LHRLGIKAE-----RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 L G K + N + I + L + L ++I++ I++ + Sbjct: 631 YLSDPRLTANGFKIKLIPGVSITENYLEIEGMANCLPFYGVADL-KEILNAILNRNAKEV 689 Query: 529 LQDRIENILATM---ACYGSIRSGRKMQSIEMNRLLREMEK--NPNSSQCNHGRPTFIKL 583 + R ++ + A S + + ++ ++ M+ +C HGRP F L Sbjct: 690 YECRPRKVIGYLEGEAVRLSRQLPMYLSKEDIQDIIYRMKHQFGNEIKECVHGRPFFHHL 749 Query: 584 K 584 Sbjct: 750 T 750 >gi|462227|sp|P34031|GYRB_SPICI RecName: Full=DNA gyrase subunit B gi|49348|emb|CAA79523.1| DNA gyrase subunit B [Spiroplasma citri] gi|745458|prf||2016285C DNA gyrase:SUBUNIT=B Length = 640 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 38/318 (11%), Positives = 97/318 (30%), Gaps = 34/318 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EIPMAVQ-RH 75 E+++NS+D A +++++ ++ + DNG G+ E + H Sbjct: 41 EIVDNSIDEVLANFANKIKIILNKD--ESITVIDNGRGIPIEIHPKTKVSTLETVFTILH 98 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K + I + G G + A+S L + R + G+ ++ ++ V Sbjct: 99 AGGKFDSNTYKI-SGGLHGVGASVVNALSKYLKVEVRKNNKKYVMEFHNGGQILTPIKEV 157 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFST----IK 190 T V +P F ++ + I + I+++ + + + Sbjct: 158 GSTSETGTTVTF----LPDEKIFKETTIFSFSTIQNRIKQLVFLNKGLEISLVDLREEDE 213 Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQF 250 F + ++ +++ IG + + N + G ++ + Sbjct: 214 EKTVLYQFNNGIKDYVLELNKTIGTPLNDVFYVEGIEDNIVVEFGLQYNDNYSENIFSFC 273 Query: 251 Y---------VFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHP 301 R + I + + + ++ + HP Sbjct: 274 NNINTHEGGTHEEGARLAIVREINNYFKNQINKNNKGNEDKFTWDDIKEGMTIIISIRHP 333 Query: 302 AKSYIRFRNPTIIRNFII 319 Y N ++ + + Sbjct: 334 EPQYEGQTNQKLLNSEVK 351 >gi|23978272|dbj|BAC21122.1| DNA gyrase B subunit [Pleurocapsa sp. PCC 7314] Length = 393 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 79/246 (32%), Gaps = 23/246 (9%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT--------SEEIPMAVQ- 73 + E+++NS+D A + +E I G +TD+G G+ + + Sbjct: 10 VYEVVDNSIDEALAGFCTHIEVDINPDG--SITVTDDGRGIPTGIHHKTGKSALETVMTV 67 Query: 74 RHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAIS---GEKISS 130 H K D + + G G + + A+S L ++ Q K+++ Sbjct: 68 LHAGGKFGDGGYKV-SGGLHGVGVSVVNALSKLVEVTVWRDKKIHLQRYERGKPQGKLAT 126 Query: 131 VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 T V +P F ++ E ++ ++ +A + TF+ + Sbjct: 127 DPNKDDPKRTGTSV----HFVPDETIFTETTVFEYEILAKRLKELAYLNAGIKITFTDNR 182 Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQF 250 S + G E + + E + + + + + ++ Sbjct: 183 SEEIHQDIFCYEGGIKEYVEYMTPEKDPLHQDIIYVNKEKKGVTVEVALQWCIDSYSDNL 242 Query: 251 YVFING 256 F N Sbjct: 243 LGFANN 248 >gi|304409963|ref|ZP_07391582.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella baltica OS183] gi|307302324|ref|ZP_07582082.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella baltica BA175] gi|304351372|gb|EFM15771.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella baltica OS183] gi|306914362|gb|EFN44783.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella baltica BA175] Length = 360 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQ-ITDNGFGMTSEEIPMAVQRHCTSK 79 S AI L+ NS++A ++ + G+ + DNG G+ + ++ T+K Sbjct: 249 LSSAINNLVMNSIEAGATEIRIQAKEEGEQLLLNVIDNGKGLDANMQQKVLEPFFTTK 306 >gi|291531292|emb|CBK96877.1| Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [Eubacterium siraeum 70/3] Length = 686 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 KL +++ Q+ + + P I EL+ NS DA+++ V I + + D+G GMT Sbjct: 12 KLDRRVLKQLGSQLYGDTP-SVIAELVANSYDADANNVWITIDTVNNNVI-VEDDGKGMT 69 Query: 65 SEEIPMAVQ 73 + +I + Sbjct: 70 AGDINESFL 78 >gi|260893225|ref|YP_003239322.1| ATP-binding region ATPase domain protein [Ammonifex degensii KC4] gi|260865366|gb|ACX52472.1| ATP-binding region ATPase domain protein [Ammonifex degensii KC4] Length = 882 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 7/53 (13%) Query: 21 ERPSIAI-KELIENSLDAE-----SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ER + + KEL++N+LDA + V + G + + DNG G+ SE Sbjct: 33 ERFACVVLKELVDNALDAAEAAGVAPEVSIDVAREDGIYWVTVADNGPGIASE 85 >gi|325283718|ref|YP_004256259.1| integral membrane sensor signal transduction histidine kinase [Deinococcus proteolyticus MRP] gi|324315527|gb|ADY26642.1| integral membrane sensor signal transduction histidine kinase [Deinococcus proteolyticus MRP] Length = 530 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIA--GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 +R + LI N+L A ++R+E G+ ++DNG G+ ++++ R Sbjct: 412 DRLRQVLNNLISNALKAGATRIELGSTQPEPGRVRLSVSDNGPGIAADQLEKLFDRFY 469 >gi|221045818|dbj|BAH14586.1| unnamed protein product [Homo sapiens] Length = 756 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 100/278 (35%), Gaps = 31/278 (11%) Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQGYT 237 P + F K+ ++ +S + + V+G +NN + + + ++I L G+ Sbjct: 8 PDLRIVFVHNKAVIWQ---KSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFL 64 Query: 238 GIPTF-----NRGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLLLE 289 + + ++FIN R V K IL IR Y YPV L ++ Sbjct: 65 PKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKID 124 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSVLS 338 + VDVN+ P KS + +N + + + NK +S + ++ Sbjct: 125 VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVL 184 Query: 339 KKMISS---FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTYSE 391 K + F++ + + TS+ Q + E+ +T+D L D Y Sbjct: 185 SKTAETDVLFNKVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGH 244 Query: 392 DNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIV 429 + + + + + ++ SQT Sbjct: 245 CSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCF 282 Score = 37.7 bits (86), Expect = 5.2, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 103/301 (34%), Gaps = 29/301 (9%) Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNAPKTHLPKYATSLTNTQEK 368 R + ++ I Q Q ++ + + H+ ++ PK L + EK Sbjct: 454 RYNSQMKRAIEQESQMSLKDGRKKIKPTSAWNLAQK-HKLKTSLSNQPKLDELLQSQIEK 512 Query: 369 LFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVI 428 Q ++ + + + V+ E L + + + +++ Sbjct: 513 RRSQNIKMVQIPFSMKNLKINFKKQNKVDLEEKDEPCLIHNLR--FPDAWLMTSKTEVML 570 Query: 429 VDQHAAHERLIFEKMRQDFN--STKITSQTLLTPEIIDLLEGECALIMEHDED------- 479 ++ + E L+F+++ ++ + + +LT + + L +D Sbjct: 571 LNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTESLFNGSHYLDVLYKMTADDQRYSGST 630 Query: 480 ------LHRLGIKAE-----RFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYT 528 L G K + N + I + L + L ++I++ I++ + Sbjct: 631 YLSDPRLTANGFKIKLIPGVSITENYLEIEGMANCLPFYGVADL-KEILNAILNRNAKEV 689 Query: 529 LQDRIENILATM---ACYGSIRSGRKMQSIEMNRLLREMEK--NPNSSQCNHGRPTFIKL 583 + R +++ + A S + + ++ ++ M+ +C HGRP F L Sbjct: 690 YECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDIIYRMKHQFGNEIKECVHGRPFFHHL 749 Query: 584 K 584 Sbjct: 750 T 750 >gi|256423226|ref|YP_003123879.1| hypothetical protein Cpin_4222 [Chitinophaga pinensis DSM 2588] gi|256038134|gb|ACU61678.1| conserved hypothetical protein [Chitinophaga pinensis DSM 2588] Length = 640 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Query: 16 AGEIIER-PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP----- 69 AG I P +AI ELI N+ DA ++ V+ + F+ITDNG GMT E Sbjct: 18 AGSSIFSEPKVAIIELIANAWDAGATEVKIKWPEKHEDPFEITDNGHGMTETEFETRFMV 77 Query: 70 MAVQR 74 +A +R Sbjct: 78 LAYER 82 >gi|209543231|ref|YP_002275460.1| hypothetical protein Gdia_1062 [Gluconacetobacter diazotrophicus PAl 5] gi|209530908|gb|ACI50845.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] Length = 644 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 1/55 (1%) Query: 16 AGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKS-FFQITDNGFGMTSEEIP 69 AG II ++AI EL+ N+ DA ++RVE K+ F I+DNG GMTSE+ Sbjct: 21 AGPIISDTNVAIVELVANAWDAYATRVEITWPDRSKNQLFSISDNGKGMTSEQFE 75 >gi|83588881|ref|YP_428890.1| DNA gyrase, B subunit [Moorella thermoacetica ATCC 39073] gi|83571795|gb|ABC18347.1| DNA gyrase, B subunit [Moorella thermoacetica ATCC 39073] Length = 634 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 20/132 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE----------EIPMAVQR 74 EL++NS+D A R+E I G + DNG G+ + E+ + + Sbjct: 44 ELVDNSIDEALAGFCDRIEVTIHENG--SLTVADNGRGIPVDIHEKTGLPAVEVALTIL- 100 Query: 75 HCTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRP 133 H K + + G G L + A+S L + + Q G+K+S ++ Sbjct: 101 HAGGKFGGNGYKVAG-GLHGVGLSVVNALSEWLEIKVKRNG-KIYHQEYRRGQKVSELKV 158 Query: 134 VAMNPGTIVEVR 145 + GT V Sbjct: 159 IGKTKGTGTSVT 170 >gi|189346303|ref|YP_001942832.1| multi-sensor signal transduction histidine kinase [Chlorobium limicola DSM 245] gi|189340450|gb|ACD89853.1| multi-sensor signal transduction histidine kinase [Chlorobium limicola DSM 245] Length = 590 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 15/96 (15%) Query: 26 AIKELIENSL----DAESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTSKI 80 ++ L++N++ D RV + G +I DNG G+ ++ +R Sbjct: 484 VVRNLLDNAVKYVDDRN-GRVRISVFRTGMDVRMEIEDNGIGIAPADLDRIFERFY---- 538 Query: 81 SDDFSNIHTFGFRGEALP-----SIGAVSHLTLMSR 111 D + T G G L IG H+ + SR Sbjct: 539 RVDKARSRTLGGTGLGLAIVKHIVIGHKGHIEVRSR 574 >gi|324502961|gb|ADY41294.1| MORC family CW-type zinc finger protein 2A [Ascaris suum] Length = 894 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 4/69 (5%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 AI EL++NS DA++ + G SF D+G GM +E+ + ++K Sbjct: 29 LFGAIAELVDNSRDAQADTLRIDYDNGQLSFL---DDGCGMDKKEVESVISFGYSAK-RM 84 Query: 83 DFSNIHTFG 91 D + +G Sbjct: 85 DPEMVGQYG 93 >gi|268610497|ref|ZP_06144224.1| DNA gyrase subunit B [Ruminococcus flavefaciens FD-1] Length = 643 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + + I G +++DNG G+ Sbjct: 43 VYEIVDNSIDEALAGYCTEINVEILEG--DVIRVSDNGRGIP 82 >gi|260769510|ref|ZP_05878443.1| signal transduction histidine kinase [Vibrio furnissii CIP 102972] gi|260614848|gb|EEX40034.1| signal transduction histidine kinase [Vibrio furnissii CIP 102972] Length = 690 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAE----SSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA + ++ + ++ DNG G+ E++ + Sbjct: 579 QRLRQVLGNLVTNALDAMQEQPAPKLIISAVVDADTVLLRVRDNGCGIAEEQLTTIFEPF 638 Query: 76 CTSK 79 TSK Sbjct: 639 QTSK 642 >gi|12275201|emb|CAC22276.1| putative heat shock protein [Listeria monocytogenes] Length = 181 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 60/152 (39%), Gaps = 22/152 (14%) Query: 29 ELIENSLDAESSRVET--VIAGGGKSFFQITDNGFGMTSE-----EIPMAVQRHCTSKIS 81 ELI N+ DA++ V I ++ + D+G GM+ E + T+ I+ Sbjct: 32 ELIANAYDADAKNVYVIDRIDE--ENKLIVEDDGSGMSYENKDVKNFLSVAKESRTNAIN 89 Query: 82 D--DFSNIHTFGFRGEA-LPSIGAVSH-LTLMSRPPQNNTGA--------QIAISGEKIS 129 +N G +G L S+ +VS + + + +G + + + + Sbjct: 90 SYTKLNNRRKMGRKGVGKLASL-SVSENVNIKTIKDGEKSGFVLSRKVINKKLEAINEDT 148 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE 161 N GT +E+ + + +P L+ + + Sbjct: 149 ISFIKIKNHGTAIEMTNPTYKLPVHLSTMANN 180 >gi|254039142|ref|ZP_04873192.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|300925888|ref|ZP_07141726.1| conserved domain protein [Escherichia coli MS 182-1] gi|226838578|gb|EEH70607.1| conserved hypothetical protein [Escherichia sp. 1_1_43] gi|300418040|gb|EFK01351.1| conserved domain protein [Escherichia coli MS 182-1] Length = 652 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 71/181 (39%), Gaps = 19/181 (10%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------H 75 P+ + E+I N+ DA++ VE + K I D+G GM+ ++I + H Sbjct: 25 PA-VLTEIISNAWDADAQNVEITL-DVEKGEVIIKDDGHGMSKDDIINKFLKVGYARREH 82 Query: 76 CTSKISDDFSNIHTFGFRGE---ALPSIGAVSHLTLMS-RPPQNNTGAQIAISGEKISSV 131 +K D G +G A+ S+ + + S + + ++ + + S Sbjct: 83 GRAK--SDHLKRQVMGRKGIGKLAMFSLAN--KIQVYSYKKGEQPQAFEVDVKDLQQSIK 138 Query: 132 RPVAMNPGTIVEVRDLFFTIPARLNFLKS--EQVETNLITDVIRRMAIAYPKVSFTFSTI 189 ++ +L + +L LK ++ +T L + RR +I P +FT Sbjct: 139 ESKNYIADSLEIPENLAYGTTIKLFELKKAIDRTQTYLRKRIARRFSIIGPNHNFTVKIN 198 Query: 190 K 190 Sbjct: 199 G 199 >gi|217967929|ref|YP_002353435.1| DNA gyrase, B subunit [Dictyoglomus turgidum DSM 6724] gi|217337028|gb|ACK42821.1| DNA gyrase, B subunit [Dictyoglomus turgidum DSM 6724] Length = 635 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 82/223 (36%), Gaps = 30/223 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR---------H 75 EL++NS+D A + + + G + DNG G+ + P A + H Sbjct: 45 ELVDNSIDEVMAGYCNYILVELKKDG--SVVVADNGRGIPVDIHPQAKKPALEVVLTTLH 102 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS---HLTLMSRPPQNNTGAQIAISGEKISSVR 132 K S+ I + G G L + A+S + +M Q G+ + + Sbjct: 103 AGGKFSNSIYKI-SGGLHGVGLSVVNALSSKLEVEVM---RDGKIFYQGYEKGKPVMPLT 158 Query: 133 PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSN 192 T ++R F+ ++ + + +++ + +R +A P V+ Sbjct: 159 VRGETDETGTKIR--FY---PDSEIFETTKFDYDIVANRLRELAFLNPNVTIELR--DER 211 Query: 193 RYKMNFQSTNGNFPERISQV-IGEDFINNAVELNEKSNEITLQ 234 K N G E I + G++ ++ + + + + ++ Sbjct: 212 TGKSNVFKYEGGLLEFIEYLSKGKEILHEPIYMRREEENLIVE 254 >gi|111021792|ref|YP_704764.1| sensor kinase, two-component system [Rhodococcus jostii RHA1] gi|110821322|gb|ABG96606.1| sensor kinase, two-component system [Rhodococcus jostii RHA1] Length = 539 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 20/84 (23%) Query: 30 LIENSLDA--ESSR-------VETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N++DA ++ VE + ++ D+G G+ ++E+ AV R ++K Sbjct: 437 LVDNAIDAARGATESPGEDAWVEVTVRQEDSMMVVRVADSGPGIPADELDKAVTRGYSTK 496 Query: 80 ISDDFSNIHTFGFRGEALPSIGAV 103 G RG L + V Sbjct: 497 ----------SGQRGLGLALVAQV 510 >gi|168211329|ref|ZP_02636954.1| hypothetical protein AC1_2196 [Clostridium perfringens B str. ATCC 3626] gi|170710622|gb|EDT22804.1| hypothetical protein AC1_2196 [Clostridium perfringens B str. ATCC 3626] Length = 679 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 85/258 (32%), Gaps = 23/258 (8%) Query: 33 NSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS-KISDD-FSNI 87 N DAE+++++ GG I DNG G+ E+ + S KI+++ SNI Sbjct: 31 NGFDAEATKIDIKFTCNELGGIDSIIIKDNGRGINFNELEDTFKCVLDSKKINNNKMSNI 90 Query: 88 HTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDL 147 H G +G+ + +S + + + + T E DL Sbjct: 91 H--GSKGK--------GRFSFISFGEKATWETVYSKGSSNEKFKIEILKSTATEFEAFDL 140 Query: 148 FFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF--STIKSNRYKMNFQSTNGNF 205 T + + ++ ++ Y F + K N Y++ + N+ Sbjct: 141 METEEKTGTIVTISGINDIKEVEINSKIFKDYFNDKFAWFLYLNKDNNYEITINGKSLNY 200 Query: 206 PERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRG------NANQFYVFINGRTV 259 E I + + ++ + K N I G A + N + + Sbjct: 201 LEFIDESLSKEVDFKIDDDLFKVNFIKWIGKISEKYHAYFIDEKFNQAYKKTTSFNNKNL 260 Query: 260 QDKFILSTIRTAYAETIP 277 + + + + IP Sbjct: 261 EFPHSIYVRSNYFNDFIP 278 >gi|146296866|ref|YP_001180637.1| histidine kinase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410442|gb|ABP67446.1| histidine kinase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 186 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Query: 30 LIENSLDAESSRVETVIA---GGGKSFFQITDNGFGMTSE 66 L++NS++A ++ V+ + I DNG G+ E Sbjct: 11 LVQNSIEAGATFVKIEVVEDLENDLFLISIEDNGRGIPKE 50 >gi|152982389|ref|YP_001355015.1| two-component sensor histidine kinase [Janthinobacterium sp. Marseille] gi|151282466|gb|ABR90876.1| two-component sensor histidine kinase [Janthinobacterium sp. Marseille] Length = 434 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 8/64 (12%) Query: 19 IIERPSI---AIKELIENSLDAE-SSRVETVIAGG--GKSFFQITDNGFGMTSEEIPMAV 72 II RP+ + LI+N+L + S++VE ++ G GK+ + DNG G+ E++ Sbjct: 326 IITRPNALRRVLINLIDNAL--KFSTQVEVSVSAGPEGKTTILVLDNGPGIPEEDLETVF 383 Query: 73 QRHC 76 Q Sbjct: 384 QPFY 387 >gi|94971644|ref|YP_593692.1| hypothetical protein Acid345_4618 [Candidatus Koribacter versatilis Ellin345] gi|94553694|gb|ABF43618.1| hypothetical protein Acid345_4618 [Candidatus Koribacter versatilis Ellin345] Length = 509 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 52/133 (39%), Gaps = 24/133 (18%) Query: 16 AGEIIERP-------SIAIKELIENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEE 67 AG +IE A+ ++++NS+DA++ + + + I D+G GM+ Sbjct: 11 AGRLIESLRHLGYGNYEAVADIVDNSIDADAQNINIRVQTKSNQIIISIADDGRGMSKSI 70 Query: 68 IPMAVQ------RHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQI 121 + A++ R+ S + + T S+ L ++SR ++ Sbjct: 71 LDQAMRLGSLTDRNAESDLGKFGMGLVT--------ASLSMAKKLHVVSR--GDDGCWSS 120 Query: 122 AISGEKISSVRPV 134 A ++I + Sbjct: 121 AWDVDEIVAQNAF 133 >gi|308175643|ref|YP_003922348.1| ATP-binding protein [Bacillus amyloliquefaciens DSM 7] gi|307608507|emb|CBI44878.1| ATP-binding protein [Bacillus amyloliquefaciens DSM 7] gi|328555624|gb|AEB26116.1| ATP-binding protein [Bacillus amyloliquefaciens TA208] gi|328914002|gb|AEB65598.1| ATP-binding protein [Bacillus amyloliquefaciens LL3] Length = 485 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 34/269 (12%), Positives = 84/269 (31%), Gaps = 32/269 (11%) Query: 31 IENSLDAESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHT 89 ++N++DA++S++ + + +I DNG GM+ EEI A+ K + + Sbjct: 32 VDNAIDAQASKITLHFEYDKLNGYIKIEDNGNGMSEEEIQTAMNIGA--KDPRTKRSPNE 89 Query: 90 FGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSV---------------R 132 G G L S L+++++ + + Sbjct: 90 LGRFGMGLKTASFSLGKRLSVITKKDGVYHERCWDLDYVSECNEWNLLTSIPTPVKEVAG 149 Query: 133 PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSN 192 + + GT++ + L + + K+ +T I + + F + Sbjct: 150 EINGSSGTVIIIDKLDRYMRNKKIQRKTFFSKTAQIQK--------HLEFVFHDLIDNN- 200 Query: 193 RYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYV 252 + ++ + +++ ++ +P ++ +F Sbjct: 201 KIIISINDVELTPWDPFMTEHPSIIEGEETLWKLDGHKMKVKYTI-LPHASKLTRTEFKK 259 Query: 253 FINGRTVQDKFILSTIRTAYAETIPLGRY 281 R +D L R + G + Sbjct: 260 AGGERGWRDHQGLYIYRE--NRLLHYGDW 286 >gi|213692028|ref|YP_002322614.1| hypothetical protein Blon_1146 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523489|gb|ACJ52236.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458139|dbj|BAJ68760.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 684 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 24 SIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEI 68 + + E + N+ DA+++RVE + I DNG GMT E+ Sbjct: 26 AAVLSEFVANAWDADATRVEIQFDPN--NSISILDNGCGMTDGEL 68 >gi|317483227|ref|ZP_07942222.1| hypothetical protein HMPREF0177_01617 [Bifidobacterium sp. 12_1_47BFAA] gi|316915296|gb|EFV36723.1| hypothetical protein HMPREF0177_01617 [Bifidobacterium sp. 12_1_47BFAA] Length = 684 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Query: 24 SIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEI 68 + + E + N+ DA+++RVE + I DNG GMT E+ Sbjct: 26 AAVLSEFVANAWDADATRVEIQFDPN--NSISILDNGCGMTDGEL 68 >gi|71894602|ref|YP_278710.1| topoisomerase IV subunit B [Mycoplasma synoviae 53] gi|71851390|gb|AAZ43999.1| topoisomerase IV subunit B [Mycoplasma synoviae 53] Length = 641 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 75/217 (34%), Gaps = 37/217 (17%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE----EIPMA 71 I + E+++NS+D A +S + + + DNG G+ E E A Sbjct: 33 IHGLHHLVAEIVDNSIDEALAGYASEITVTLHSD--LSVSVFDNGRGIPVEKVKGEFKTA 90 Query: 72 V-----QRHCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLT-LMSRPPQNNTGA 119 V + H K S D + G G AL S L ++SR ++ A Sbjct: 91 VELVFTELHAGGKFSSDSYK-TSGGLHGVGSSVVNALSS-----KLEVIVSRNDKSYKTA 144 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 I S + + P+ GT+V+ F K ++ + I + ++ + Sbjct: 145 FIQDSIVEKTHEIPLQFKRGTLVKFW-------PDYKFFKDARLNFSTIAERLKESSFLV 197 Query: 180 PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGED 216 + T N ++ + E + + G Sbjct: 198 SNLKITIIDEIKNHKEV--YQSQKGLEEFLDFINGSK 232 >gi|71908188|ref|YP_285775.1| hypothetical protein Daro_2572 [Dechloromonas aromatica RCB] gi|71847809|gb|AAZ47305.1| hypothetical protein Daro_2572 [Dechloromonas aromatica RCB] Length = 537 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 21/129 (16%) Query: 27 IKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH------CTSKI 80 + EL++N+ A ++ +E G + D+G G+ ++ + H TS Sbjct: 27 VSELLQNARRAGATHIEVDY-DAGTRILVVQDDGGGL--DDFQKLLSFHESGWDDATS-- 81 Query: 81 SDDFSNIHTFGFRGEALPSIG--AVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNP 138 ++ GF S A + + SR + + A++ I Sbjct: 82 AE--ERPFGVGF------SKCLYAATRCIVASRHQRVDIDTAAALAKAAIDVEPMAEAVT 133 Query: 139 GTIVEVRDL 147 GT +E+ + Sbjct: 134 GTWIELHGV 142 >gi|84500978|ref|ZP_00999213.1| C4-dicarboxylate transport sensor protein DctB, putative [Oceanicola batsensis HTCC2597] gi|84391045|gb|EAQ03463.1| C4-dicarboxylate transport sensor protein DctB, putative [Oceanicola batsensis HTCC2597] Length = 591 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 6/62 (9%) Query: 22 RPSIAIKELIENSLDAESS----RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 R + L+ N++DA SS ++ +++ G + + DNG G+ E + + T Sbjct: 479 RLEQVLINLMRNAIDATSSVENPAIDVILSVGETATITVRDNGTGI--ENLEDLFEPFYT 536 Query: 78 SK 79 +K Sbjct: 537 TK 538 >gi|147860182|emb|CAN78719.1| hypothetical protein VITISV_031696 [Vitis vinifera] Length = 507 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 68/209 (32%), Gaps = 32/209 (15%) Query: 29 ELIENSLDA---ESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++NSLD ++ V I G I DNG GM E++ + + SKI Sbjct: 52 ELLDNSLDEICNGATYVNVDILQNKRDGNKMLLIEDNGGGMDPEKMRQCMSLGYSEKSKI 111 Query: 81 SDDF-------SNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRP 133 ++ +F F L L+S + + + + Sbjct: 112 ANTIGQYKSPVEKDGSFLF------------DLQLISLICEFDNQLIYKEHWIDLMDMFN 159 Query: 134 VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR-----RMAIAYPKVSFTFST 188 G + + +L+ +L + I V R +MA +P + Sbjct: 160 FLKENGMRIIIYNLWEDDSGQLELDFDTDQQDIHIRGVNRDEKNIQMAKQFPNSRHFLTY 219 Query: 189 IKSNRYKMNFQSTNGNFPERISQVIGEDF 217 S R + G+ + V+ DF Sbjct: 220 RHSLRPFWRLWNAAGSDGRGVIGVLEADF 248 >gi|295402119|ref|ZP_06812078.1| DNA gyrase, B subunit [Geobacillus thermoglucosidasius C56-YS93] gi|312109156|ref|YP_003987472.1| DNA gyrase subunit beta [Geobacillus sp. Y4.1MC1] gi|294975802|gb|EFG51421.1| DNA gyrase, B subunit [Geobacillus thermoglucosidasius C56-YS93] gi|311214257|gb|ADP72861.1| DNA gyrase, B subunit [Geobacillus sp. Y4.1MC1] Length = 640 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I G +TDNG G+ + Sbjct: 47 EIVDNSIDEALAGYCTEINVTIEKDG--SITVTDNGRGIPVD 86 >gi|160886780|ref|ZP_02067783.1| hypothetical protein BACOVA_04793 [Bacteroides ovatus ATCC 8483] gi|156107191|gb|EDO08936.1| hypothetical protein BACOVA_04793 [Bacteroides ovatus ATCC 8483] Length = 767 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 8/72 (11%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSF-------FQITDNGFGMTSEEIPMAVQRHCT- 77 A+ ELI+N+ DA++ V+ G +S I DNG GMTSE I + T Sbjct: 35 AVIELIKNAYDADADWVKVSFEGFTESLNITSESRIIIEDNGCGMTSERIEKSWMSPATP 94 Query: 78 SKISDDFSNIHT 89 +K S D S T Sbjct: 95 NKFSKDGSERRT 106 >gi|304383752|ref|ZP_07366211.1| conserved hypothetical protein [Prevotella marshii DSM 16973] gi|304335276|gb|EFM01547.1| conserved hypothetical protein [Prevotella marshii DSM 16973] Length = 627 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 35/230 (15%), Positives = 85/230 (36%), Gaps = 23/230 (10%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSE--EIPMAVQRHCTS 78 + EL+ N+ DA++ V I+ K +I D+G GM+ + E+ + S Sbjct: 26 TNLYYVLAELVANAYDADAHNVYI-ISN--KDDIRIEDDGHGMSYQNGEVKKFLNVAGVS 82 Query: 79 KISDDFSNIHT-----FGFRGEA-LPSIGAVSH-LTLMSRPPQNNTGAQIAISGE----- 126 ++ ++ S + G +G L ++ +VS + +M+ +G ++ Sbjct: 83 RVKEEESMTRSGERRKMGRKGVGKLAAL-SVSESVDVMTISDNEKSGFVLSRRPIDGNKL 141 Query: 127 ----KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLK-SEQVETNLITDVIRRMAIAYPK 181 GT + +R+ + + ++ +K + L+ D + I + Sbjct: 142 RPIADDDIKFVYIQEHGTAIVMRNPQYRLNKSMDSVKRNLLKIFPLVNDNFKIHIIRGNE 201 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI 231 + ++ ++ + G+ +++ I + EL E Sbjct: 202 TVTIDTFDENIAKELCAFISLGDDFSDLAKNIPNQYPAKRTELVEHREPY 251 >gi|209521258|ref|ZP_03269978.1| histidine kinase [Burkholderia sp. H160] gi|209498300|gb|EDZ98435.1| histidine kinase [Burkholderia sp. H160] Length = 679 Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAESS----RVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + R+ + G + + DNG G+ + +P + Sbjct: 559 RLEQVLINLLGNALDATAGMSLPRITIEVEAGAANLSIVVGDNGPGIPDDVLPHLFEPFF 618 Query: 77 TSK 79 T+K Sbjct: 619 TTK 621 >gi|157373918|ref|YP_001472518.1| DNA topoisomerase IV subunit B [Shewanella sediminis HAW-EB3] gi|157316292|gb|ABV35390.1| DNA topoisomerase (ATP-hydrolyzing) [Shewanella sediminis HAW-EB3] Length = 628 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 76/211 (36%), Gaps = 39/211 (18%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A +++++ ++ + ++ D+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHATKIDVILHKD--NSLEVIDDGRGMPVDIHPEEGIPGV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQ--NNTGA 119 + + + H K S+D + G G AL S + + R + Sbjct: 88 ELILTKLHAGGKFSNDNYQ-FSGGLHGVGISVVNALSS-----RVEITVRRNGIVYDMAF 141 Query: 120 QIAISGEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 + E + N GT V F+ P+ +F + + +++ A+ Sbjct: 142 EHGHKVEDLVETGTCGRRNSGTRVH----FWPTPSYFDFE---NFSISKLVYLLKAKAVL 194 Query: 179 YPKVSFTFSTIKSNRYKMNFQSTNGNFPERI 209 P + F ++ + + Sbjct: 195 CPGLKIKFVN--KQTDEVLEWYYESGLTDYL 223 >gi|313114392|ref|ZP_07799921.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310623286|gb|EFQ06712.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 345 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 26 AIKELIENSLD---AESSRVETVIAGG--GKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 A+ L++N+LD + ++ ++ DNG G+ E++ +R S+ Sbjct: 241 AVDNLVKNALDHTKSG-DTIQVE-WNALPSMVQIKVRDNGSGIHPEDLYHIFKRFYRSRF 298 Query: 81 SDDFSNIHTFG 91 S D I G Sbjct: 299 SQDTQGIG-LG 308 >gi|295102501|emb|CBL00046.1| Signal transduction histidine kinase [Faecalibacterium prausnitzii L2-6] Length = 345 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 26 AIKELIENSLD---AESSRVETVIAGG--GKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 A+ L++N+LD + ++ ++ DNG G+ E++ +R S+ Sbjct: 241 AVDNLVKNALDHTKSG-DTIQVE-WNALPSMVQIKVRDNGSGIHPEDLYHIFKRFYRSRF 298 Query: 81 SDDFSNIHTFG 91 S D I G Sbjct: 299 SQDTQGIG-LG 308 >gi|228964033|ref|ZP_04125163.1| Histidine Kinase [Bacillus thuringiensis serovar sotto str. T04001] gi|228795685|gb|EEM43162.1| Histidine Kinase [Bacillus thuringiensis serovar sotto str. T04001] Length = 523 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 2/45 (4%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSE 66 P+ + EL++NS DA++S VE V++ +I+D+G GM ++ Sbjct: 25 PASIV-ELVKNSYDADASYVEIVLSKINDQLHIKISDDGHGMDTD 68 >gi|289677872|ref|ZP_06498762.1| sensor histidine kinase [Pseudomonas syringae pv. syringae FF5] Length = 210 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Query: 30 LIENSLDA----ESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N+LDA S +E I G + DNG G+ +E +P T+K Sbjct: 110 LLRNALDAMRECRSRHLEVRIDAVGNYWRLSVRDNGSGIAAENLPSIFDPFFTTK 164 >gi|269793521|ref|YP_003312976.1| signal transduction histidine kinase [Sanguibacter keddieii DSM 10542] gi|269095706|gb|ACZ20142.1| signal transduction histidine kinase [Sanguibacter keddieii DSM 10542] Length = 492 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 ++ L++N+L +SRV + G + D+G G+ + + +R Sbjct: 392 VVRNLVDNALRHSASRVLVEVRDG---RVVVEDDGPGIAAADRERVFERFT 439 >gi|260779257|ref|ZP_05888149.1| C4-dicarboxylate transport sensor protein putative [Vibrio coralliilyticus ATCC BAA-450] gi|260605421|gb|EEX31716.1| C4-dicarboxylate transport sensor protein putative [Vibrio coralliilyticus ATCC BAA-450] Length = 684 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 8/70 (11%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N+LDA + +E + +I DNG G+ + + + Sbjct: 578 RLRHVLGNLVGNALDAMVNTDFPRLDIEVRCSSNEVE-IRIIDNGCGVEQDNLERMFEPF 636 Query: 76 CTS-KISDDF 84 TS KI + Sbjct: 637 YTSKKIGEGL 646 >gi|324993631|gb|EGC25550.1| hypothetical protein HMPREF9390_0017 [Streptococcus sanguinis SK405] gi|324995057|gb|EGC26970.1| hypothetical protein HMPREF9392_1873 [Streptococcus sanguinis SK678] gi|327462900|gb|EGF09221.1| hypothetical protein HMPREF9378_0016 [Streptococcus sanguinis SK1] Length = 634 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 30/202 (14%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEE-----IPMA-VQRH--CTSKI 80 ELI NS DA++ V ++G I D+G GMT E + +A R+ SK Sbjct: 33 ELIANSYDADAENVWLDLSG---DSIIIEDDGHGMTYAETVNKYLEVAKSTRNTEAESKS 89 Query: 81 SDDFSNIHTFGFRGEA-LPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA---- 135 G +G L ++ + + + ++ +G + + K ++ P+ Sbjct: 90 RK--FQRPKMGRKGIGKLAALAVSTEVNVKTKSNGELSGFVLTRNVPKDRNLHPIPESEI 147 Query: 136 -----MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 GT +E+ + F +PA +K+ + + PK F Sbjct: 148 TFSNISESGTRIEMLNSEFKLPATTITVKNNLAKFFPQL-------SSNPKNPFVLHIRG 200 Query: 191 SNRYKMNFQSTNGNFPERISQV 212 + + + + + Sbjct: 201 KDGINKKLDNFVDSLATSLDSL 222 >gi|332557563|ref|ZP_08411885.1| sensor histidine kinase [Rhodobacter sphaeroides WS8N] gi|332275275|gb|EGJ20590.1| sensor histidine kinase [Rhodobacter sphaeroides WS8N] Length = 587 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Query: 22 RPSIAIKELIENSLDAESS----RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 R I L+ N+LDA + +++ V+A G + + DNG G+ E++ + T Sbjct: 477 RLEQVIINLLRNALDATKTVPSPQIDLVLAAGETATLTVRDNGHGI--EDLDNLFEPFYT 534 Query: 78 SK 79 +K Sbjct: 535 TK 536 >gi|302187766|ref|ZP_07264439.1| sensor histidine kinase [Pseudomonas syringae pv. syringae 642] Length = 585 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA S R+E I + + DNG G+ +E +P Sbjct: 477 RLEQVLINLLRNALDAMRECRSKRLEVRIDAVDNQWRLSVRDNGSGIAAENLPSIFDPFF 536 Query: 77 TSK 79 T+K Sbjct: 537 TTK 539 >gi|221638539|ref|YP_002524801.1| sensor protein [Rhodobacter sphaeroides KD131] gi|221159320|gb|ACM00300.1| Sensor protein [Rhodobacter sphaeroides KD131] Length = 587 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Query: 22 RPSIAIKELIENSLDAESS----RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 R I L+ N+LDA + +++ V+A G + + DNG G+ E++ + T Sbjct: 477 RLEQVIINLLRNALDATKTVPSPQIDLVLAAGETATLTVRDNGHGI--EDLDNLFEPFYT 534 Query: 78 SK 79 +K Sbjct: 535 TK 536 >gi|121608165|ref|YP_995972.1| hypothetical protein Veis_1182 [Verminephrobacter eiseniae EF01-2] gi|121552805|gb|ABM56954.1| conserved hypothetical protein [Verminephrobacter eiseniae EF01-2] Length = 671 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 48/121 (39%), Gaps = 14/121 (11%) Query: 24 SIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-HCTSKISD 82 + + E + N+ DA++S V + + +I D+G GM+ +++ R + + Sbjct: 46 AAVLTEAVANAWDADASSVRVRVDPNNQW-VEIEDDGIGMSVDDLNGKYLRVGYRRRDDE 104 Query: 83 DFSNIH-------TFGFRG---EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVR 132 D + G +G +L SI V + + S + G ++ + K + Sbjct: 105 DAEHGRKTAKGRPVMGRKGLGKLSLFSIADV--IEVQSAKNGDRHGFRMTVPDIKKAVHE 162 Query: 133 P 133 Sbjct: 163 K 163 >gi|126461573|ref|YP_001042687.1| integral membrane sensor signal transduction histidine kinase [Rhodobacter sphaeroides ATCC 17029] gi|126103237|gb|ABN75915.1| integral membrane sensor signal transduction histidine kinase [Rhodobacter sphaeroides ATCC 17029] Length = 604 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Query: 22 RPSIAIKELIENSLDAESS----RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 R I L+ N+LDA + +++ V+A G + + DNG G+ E++ + T Sbjct: 494 RLEQVIINLLRNALDATKTVPSPQIDLVLAAGETATLTVRDNGHGI--EDLDNLFEPFYT 551 Query: 78 SK 79 +K Sbjct: 552 TK 553 >gi|46199441|ref|YP_005108.1| two-component system histidine kinase [Thermus thermophilus HB27] gi|46197067|gb|AAS81481.1| two-component system histidine kinase [Thermus thermophilus HB27] Length = 468 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 21 ERPSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 +R + L+ N+L A + V G K+ ++ D+G G+ E +P +R Sbjct: 355 DRLHQVMANLVSNALKAGARHVWLRAFDLGDKAVVRVEDDGEGIPEEHLPHLFERFY 411 >gi|55981472|ref|YP_144769.1| sensor histidine kinase [Thermus thermophilus HB8] gi|55772885|dbj|BAD71326.1| sensor histidine kinase [Thermus thermophilus HB8] Length = 468 Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 21 ERPSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 +R + L+ N+L A + V G K+ ++ D+G G+ E +P +R Sbjct: 355 DRLHQVMANLVSNALKAGARHVWLRAFDLGDKAVVRVEDDGEGIPEEHLPHLFERFY 411 >gi|328885555|emb|CCA58794.1| two-component system sensor kinase [Streptomyces venezuelae ATCC 10712] Length = 557 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 13/82 (15%) Query: 23 PSIAIKELIENSLDA-----ESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHC 76 + L++N+LDA + R++ G++ ++TD+G G+ E + Sbjct: 432 LVTVVGNLVDNALDAVAGTPGA-RIDVSFRTEGRTVVLRVTDSGPGVPEERRELIFTEGW 490 Query: 77 TSKISDDFSNIHTFGFRGEALP 98 T+K + + G RG L Sbjct: 491 TTK------ALPSHGKRGLGLA 506 >gi|288573114|ref|ZP_06391471.1| conserved hypothetical protein [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568855|gb|EFC90412.1| conserved hypothetical protein [Dethiosulfovibrio peptidovorans DSM 11002] Length = 628 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 77/208 (37%), Gaps = 23/208 (11%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSE--EIPMAVQRHCTSKISDD 83 + ELI N+ DA++ V + G+ ++ D+G GM+ +I + S+ +++ Sbjct: 32 VLAELIANAYDADAKNVYII---AGRDDIRVEDDGHGMSYSSGDISKYLNVAGVSRTNEE 88 Query: 84 FSNIHT-----FGFRGEA-LPSIGAVSH-LTLMSRPPQNNTGAQIAISG---------EK 127 S + G +G L ++ +VS + +M+ +G ++ + Sbjct: 89 DSFTKSGDRRKMGRKGVGKLAAL-SVSENVDVMTIADGEKSGFVLSRRPEEGNRLKAIPE 147 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLK-SEQVETNLITDVIRRMAIAYPKVSFTF 186 + + GT + +R + + L +K + L+ R + + Sbjct: 148 TGIIFENIIEHGTAIIMRAPQYRLHKTLEAIKRNLLKIFPLVNADFRIHIVRGTESEIID 207 Query: 187 STIKSNRYKMNFQSTNGNFPERISQVIG 214 KS ++ T G + ++ Sbjct: 208 DFDKSIMNELGTLITLGEDYSSLCNLVP 235 >gi|330818417|ref|YP_004362122.1| C4-dicarboxylate transport sensor histidine kinase DctB [Burkholderia gladioli BSR3] gi|327370810|gb|AEA62166.1| C4-dicarboxylate transport sensor histidine kinase DctB [Burkholderia gladioli BSR3] Length = 679 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 20/83 (24%) Query: 30 LIENSLDA----ESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDF 84 L+ N+LDA + R+ I G + DNG G+ E +P + T+K Sbjct: 570 LLGNALDAVAGVAAPRILVSIEANPGTIVITVADNGPGVPPELLPRLFEPFFTTK----- 624 Query: 85 SNIHTFGFRGEAL-----PSIGA 102 G RG L SI + Sbjct: 625 ----EMG-RGLGLGLAISSSIAS 642 >gi|126735803|ref|ZP_01751548.1| C4-dicarboxylate transport sensor protein DctB, putative [Roseobacter sp. CCS2] gi|126714990|gb|EBA11856.1| C4-dicarboxylate transport sensor protein DctB, putative [Roseobacter sp. CCS2] Length = 567 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 17/85 (20%) Query: 3 IRKLSEKII----NQIAAGEIIERPSIAIKELIENSLDA---ESS-RVETVIAGGGKSFF 54 IR L + + +++ ++I L+ N+LDA ++ +E ++A G Sbjct: 441 IRTLPNEPVMIMGDRLRLEQVIIN-------LLRNALDATKSAANPTIEILLAAGDTVSI 493 Query: 55 QITDNGFGMTSEEIPMAVQRHCTSK 79 QI DNG G+ E + + T+K Sbjct: 494 QIRDNGEGI--ENLDDLFEPFYTTK 516 >gi|306831763|ref|ZP_07464920.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426188|gb|EFM29303.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 650 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ +E I + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFATHIEVFIEED--DSITVVDDGRGIPVD 90 >gi|237725526|ref|ZP_04556007.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229436213|gb|EEO46290.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 537 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 49/125 (39%), Gaps = 14/125 (11%) Query: 24 SIAIKELIENSLDAESSRVETVIAGGGKSFFQI--TDNGFGMTSEEIPMAVQRHCTSKIS 81 + A+ ++++NS+ A ++++ + ++ DNG GM + + A++ SK Sbjct: 34 NTAVADIVDNSIAANATKINIEVNMDPNMQVKVYFADNGCGMDLDGLKNAMK--YGSK-- 89 Query: 82 DDFSNI--HTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMN 137 I ++ G G L S +L+SR ++ + + + Sbjct: 90 ---ERIEKNSLGKFGLGLKTASTAFCKQFSLISRNSPDSE-LRKVQWDLDYIANNGSWLL 145 Query: 138 PGTIV 142 ++ Sbjct: 146 QFPVI 150 >gi|254488602|ref|ZP_05101807.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Roseobacter sp. GAI101] gi|214045471|gb|EEB86109.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Roseobacter sp. GAI101] Length = 771 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 25 IAIKELIENSLDAESSRVETV---IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 A+ ELI+N+ DA+++ V G I DNG GM + I + R T Sbjct: 66 TALSELIKNAYDADATEVNITFANFEKAGGELI-IADNGVGMDIDTIRNSWMRLST 120 >gi|120402406|ref|YP_952235.1| GAF sensor signal transduction histidine kinase [Mycobacterium vanbaalenii PYR-1] gi|119955224|gb|ABM12229.1| GAF sensor signal transduction histidine kinase [Mycobacterium vanbaalenii PYR-1] Length = 559 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 12/81 (14%), Positives = 35/81 (43%), Gaps = 19/81 (23%) Query: 4 RKLSEKIINQIAAGEI-----------IERPS------IAIKELIENSL-DAESSRVETV 45 ++L E I Q A ++ + P+ ++E + N++ + ++ ++ Sbjct: 441 QRLDEA-IAQFTASDVHTTVQFSGPLSVVDPALSDHAEAVVREAVSNAIRHSGATTLDVS 499 Query: 46 IAGGGKSFFQITDNGFGMTSE 66 + + ++ D+G GM ++ Sbjct: 500 VTAADELIIEVADDGCGMPAD 520 >gi|206900988|ref|YP_002251257.1| DNA gyrase, B subunit [Dictyoglomus thermophilum H-6-12] gi|206740091|gb|ACI19149.1| DNA gyrase, B subunit [Dictyoglomus thermophilum H-6-12] Length = 635 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 80/227 (35%), Gaps = 38/227 (16%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR---------H 75 EL++NS+D A + + G + DNG G+ + P A + H Sbjct: 45 ELVDNSIDEVMAGYCDYILVELKKDGA--VVVADNGRGIPVDIHPQAKKPALEVVLTTLH 102 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAV-SHLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K S+ I + G G L + A+ S L + + KI Sbjct: 103 AGGKFSNSIYKI-SGGLHGVGLSVVNALSSKLEV------------EVMRDGKIFYQVYE 149 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLK------SEQVETNLITDVIRRMAIAYPKVSFTFST 188 P T + V+ ++ F + + + +++ + +R +A PKV+ Sbjct: 150 RGKPITPLTVKGETDKTGTKIKFYPDPEIFETTKFDYDIVANRLRELAFLNPKVTIELR- 208 Query: 189 IKSNRYKMNFQSTNGNFPERISQV-IGEDFINNAVELNEKSNEITLQ 234 + N G E I + G++ ++ + + + + L+ Sbjct: 209 -DERTGRSNIFKYEGGLLEFIEYLSKGKEVLHEPIYMEREEGNLILE 254 >gi|319791343|ref|YP_004152983.1| DNA mismatch repair protein [Variovorax paradoxus EPS] gi|315593806|gb|ADU34872.1| putative DNA mismatch repair protein [Variovorax paradoxus EPS] Length = 663 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 4/77 (5%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAGG---GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 P AI EL+ N DA++ V ++ G G + ++D+G G+ E R Sbjct: 24 TDPWRAIAELVWNGFDAKALNVGVLVDEGPMGGATRVDVSDDGEGIELETHAETFGRFND 83 Query: 78 SKISDDFSNIHTFGFRG 94 S +D + + G RG Sbjct: 84 SSKKEDVTTHGSHG-RG 99 >gi|291515627|emb|CBK64837.1| hypothetical protein AL1_26550 [Alistipes shahii WAL 8301] Length = 588 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 85/225 (37%), Gaps = 23/225 (10%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSE--EIPMAVQRHCTSKISDD 83 + EL+ N+ DA++ V I+ K +I D+G GM+ + E+ + S++ ++ Sbjct: 31 VLAELVANAYDADAHNVYI-ISN--KDDIRIEDDGHGMSYQNGEVKKFLNVAGVSRVKEE 87 Query: 84 FSNIHT-----FGFRGEA-LPSIGAVSH-LTLMSRPPQNNTGAQIAISGE---------K 127 S + G +G L ++ +VS + +M+ +G ++ Sbjct: 88 ESMTRSGERRKMGRKGVGKLAAL-SVSESVDVMTISDNEKSGFVLSRRPIDGNKLRPIAD 146 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLK-SEQVETNLITDVIRRMAIAYPKVSFTF 186 GT + +R+ + + ++ +K + L+ D + I + Sbjct: 147 DDIKFVYIQEHGTAIVMRNPQYRLNKSMDSVKRNLLKIFPLVNDNFKIHIIRGNETVTID 206 Query: 187 STIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI 231 + ++ ++ + G+ +++ I + EL E Sbjct: 207 TFDENIAKELCAFISLGDDFSDLAKNIPNQYPAKRTELVEHREPY 251 >gi|89897136|ref|YP_520623.1| hypothetical protein DSY4390 [Desulfitobacterium hafniense Y51] gi|89336584|dbj|BAE86179.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 477 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 29/62 (46%), Gaps = 7/62 (11%) Query: 20 IERPSIAIKELIENSLDAESS---RVETVIAG-GGKSFF-QITDNGFGMTSEEIPMAVQR 74 ++R I+ L++N++ ++ + + G+ I DNG G+ +++P +R Sbjct: 347 VDRLEQIIRNLLKNAI--AATENGTIRVGVEERYGREVVLTIEDNGTGIAPDDLPHIWER 404 Query: 75 HC 76 Sbjct: 405 FY 406 >gi|219667005|ref|YP_002457440.1| histidine kinase [Desulfitobacterium hafniense DCB-2] gi|219537265|gb|ACL19004.1| histidine kinase [Desulfitobacterium hafniense DCB-2] Length = 540 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 29/62 (46%), Gaps = 7/62 (11%) Query: 20 IERPSIAIKELIENSLDAESS---RVETVIAG-GGKSFF-QITDNGFGMTSEEIPMAVQR 74 ++R I+ L++N++ ++ + + G+ I DNG G+ +++P +R Sbjct: 410 VDRLEQIIRNLLKNAI--AATENGTIRVGVEERYGREVVLTIEDNGTGIAPDDLPHIWER 467 Query: 75 HC 76 Sbjct: 468 FY 469 >gi|297625214|ref|YP_003686977.1| DNA gyrase subunit B [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296920979|emb|CBL55516.1| DNA gyrase subunit B [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 680 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 6/47 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 ++E+++NS+D A + +E + GG ++ DNG G+ E P Sbjct: 71 VREIVDNSVDEALAGYADSIEVTLLNGG--GCRVVDNGRGIPVAEHP 115 >gi|332826653|gb|EGJ99479.1| hypothetical protein HMPREF9455_04131 [Dysgonomonas gadei ATCC BAA-286] Length = 663 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 28/53 (52%) Query: 17 GEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 G ++ P IA+ EL+ N+ DA ++ V+ I + DNG G+T E+ Sbjct: 43 GALVHFPEIALTELVANAWDAGATMVDIFIPEDYDQKLTVEDNGTGLTKEQFE 95 >gi|67599551|ref|XP_666295.1| DNA mismatch repair protein, C-terminal domain [Cryptosporidium hominis TU502] gi|54657263|gb|EAL36066.1| DNA mismatch repair protein, C-terminal domain [Cryptosporidium hominis] Length = 363 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 8/101 (7%) Query: 425 GLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLG 484 + I+DQHA+ E+ FEK+ D ++ I +Q L++P I L + L++ + + + G Sbjct: 172 HIFIIDQHASDEKARFEKLNSDLSN--IQTQKLISPLSISLTPSQEQLVISYKDIFEQNG 229 Query: 485 IKAERFGPNA-----IAIREIPAILSKKNIPQLLRDIIDEI 520 + F N+ I + ++P IL D++ +I Sbjct: 230 FRF-IFNSNSEIGSRIQLTQLPVILGIPLKQIDFLDLLSQI 269 >gi|153001455|ref|YP_001367136.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella baltica OS185] gi|217972613|ref|YP_002357364.1| PAS/PAC sensor-containing signal transduction histidine kinase [Shewanella baltica OS223] gi|151366073|gb|ABS09073.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella baltica OS185] gi|217497748|gb|ACK45941.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella baltica OS223] Length = 360 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQ-ITDNGFGMTSEEIPMAVQRHCTSK 79 S AI L+ NS++A ++ + G + DNG G+ + ++ T+K Sbjct: 249 LSSAINNLVMNSIEAGATEIRIQAKEEGDQLLLNVIDNGKGLDANMQQKVLEPFFTTK 306 >gi|160876180|ref|YP_001555496.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella baltica OS195] gi|160861702|gb|ABX50236.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella baltica OS195] gi|315268376|gb|ADT95229.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella baltica OS678] Length = 360 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQ-ITDNGFGMTSEEIPMAVQRHCTSK 79 S AI L+ NS++A ++ + G + DNG G+ + ++ T+K Sbjct: 249 LSSAINNLVMNSIEAGATEIRIQAKEEGDQLLLNVIDNGKGLDANMQQKVLEPFFTTK 306 >gi|296535368|ref|ZP_06897568.1| ATPase [Roseomonas cervicalis ATCC 49957] gi|296264310|gb|EFH10735.1| ATPase [Roseomonas cervicalis ATCC 49957] Length = 486 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 13/126 (10%) Query: 22 RPSIAIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSKI 80 S A+ ++I+NS+ A +S+V+ G S I D+G GM S ++ A++ + Sbjct: 11 STSSALADIIDNSIAAAASKVDIEFVWAGASSHVTIVDDGRGMGSADLERAMR------L 64 Query: 81 SD----DFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 D D G G + S LT+ SR + + + + Sbjct: 65 GDRNPLDPRAPGDLGRFGLGMKTASFSQCRRLTVASRQAGALSCLRWDLDEIVANGGHEW 124 Query: 135 AMNPGT 140 + G Sbjct: 125 ELFEGP 130 >gi|241889819|ref|ZP_04777117.1| DNA gyrase, B subunit [Gemella haemolysans ATCC 10379] gi|241863441|gb|EER67825.1| DNA gyrase, B subunit [Gemella haemolysans ATCC 10379] Length = 638 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I G ++ ++ DNG G+ + Sbjct: 46 EIVDNSIDEALAGYCNTITVAIEEG--NWIRVEDNGRGIPVD 85 >gi|302391438|ref|YP_003827258.1| hypothetical protein Acear_0652 [Acetohalobium arabaticum DSM 5501] gi|302203515|gb|ADL12193.1| conserved hypothetical protein [Acetohalobium arabaticum DSM 5501] Length = 448 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 64/171 (37%), Gaps = 30/171 (17%) Query: 24 SIAI-KELIENSLDA-------ESS-----RVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 + I +E I+NS+DA + +++ I S I DNG G++S+ Sbjct: 23 AKVIYREYIQNSVDAIDEAINSGITDKCEAKIDIEINKNN-SKITIKDNGTGISSKNAVK 81 Query: 71 AVQRHCTSKISDDFSNIH----TFGFRGEA-LPSIGAVSHLTLMSRPPQNNTGAQIAISG 125 K+ D ++ T GFRG L + L ++ + ++ Sbjct: 82 --------KLLDIGNSTKNPESTIGFRGIGRLAGLSYCQKLKFVTSYKGEDKKTIVSFDA 133 Query: 126 EKISSVRPVAMNPGTIVEVRDLFFTI-PARLNFLKSEQVETNLITDVIRRM 175 K+ + T ++ + + ++ + K+++ +I + + + Sbjct: 134 NKLEKLLIP--GEYTDYDLLTVIKEVTKSKKHNEKTDKHYFKVILEEVNNI 182 >gi|529464|gb|AAA91333.1| topoisomerase II subunit B [Mycoplasma gallisepticum] Length = 633 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 73/241 (30%), Gaps = 23/241 (9%) Query: 29 ELIENSLD-A---ESSRVETVIAGGGKSFFQITDNGFGMT-----SEEIPMA----VQRH 75 EL +N++D A ++++E V G +TDNG G+ + + H Sbjct: 41 ELFDNAVDEALNGSANKIEVVHKKDG--SIIVTDNGRGIPVGKNLATNLSTVDTVYTVLH 98 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D + + G G + A+S +++ I G KI Sbjct: 99 AGGKFDDQAYKV-SGGLHGVGASVVNALSRKLIVTVHRDGGMYESIYQDGGKIIQPLKKM 157 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + + + K+ Q +I + + + + + F + Sbjct: 158 GSSTKHGTIIQFW----PDPTIFKNIQFNPYMIKERLHESSFLFKGLKIVFVDENNPELS 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 F + +G + I+ + +I + G + + F N Sbjct: 214 QTFIAKDGILEYLKYVNENKKTISKIIPFKGDYEKIVVDGCF---QYTDNESELIISFAN 270 Query: 256 G 256 Sbjct: 271 S 271 >gi|330973509|gb|EGH73575.1| sensor histidine kinase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 585 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA S R+E I + + DNG G+ +E +P Sbjct: 477 RLEQVLINLLRNALDAMRECRSRRLEVRIDALDNQWRLSVRDNGSGIAAENLPSIFDPFF 536 Query: 77 TSK 79 T+K Sbjct: 537 TTK 539 >gi|66047221|ref|YP_237062.1| sensor histidine kinase [Pseudomonas syringae pv. syringae B728a] gi|63257928|gb|AAY39024.1| ATP-binding region, ATPase-like:Histidine kinase A, N-terminal [Pseudomonas syringae pv. syringae B728a] Length = 585 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA S R+E I + + DNG G+ +E +P Sbjct: 477 RLEQVLINLLRNALDAMRECRSRRLEVRIDALDNQWRLSVRDNGSGIAAENLPSIFDPFF 536 Query: 77 TSK 79 T+K Sbjct: 537 TTK 539 >gi|307822419|ref|ZP_07652651.1| DNA topoisomerase IV, B subunit [Methylobacter tundripaludum SV96] gi|307736985|gb|EFO07830.1| DNA topoisomerase IV, B subunit [Methylobacter tundripaludum SV96] Length = 630 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ ++E+++NS+D A ++ ++ V+ G ++DNG GM + Sbjct: 30 TRPNHLVQEVVDNSVDEAMAGHATAIDVVLYKDG--SVLVSDNGRGMPVD 77 >gi|254506154|ref|ZP_05118298.1| signal transduction histidine kinase [Vibrio parahaemolyticus 16] gi|219550972|gb|EED27953.1| signal transduction histidine kinase [Vibrio parahaemolyticus 16] Length = 688 Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 8/73 (10%) Query: 18 EIIERPSIAIKELIENSLDA---ESS-RVETVIAGGGKSF-FQITDNGFGMTSEEIPMAV 72 E+ R + LI N++DA ++ + G ++DNG G+ +++ Sbjct: 577 EV--RLRQVLGNLIRNAIDALKGRATPTISINAKRIGDKVTLDVSDNGCGIDPDQLGSIF 634 Query: 73 QRHCTS-KISDDF 84 + T+ KI + Sbjct: 635 EPFQTNKKIGEGL 647 >gi|330950102|gb|EGH50362.1| sensor histidine kinase [Pseudomonas syringae Cit 7] Length = 585 Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA S R+E I + + DNG G+ ++++P Sbjct: 477 RLEQVLINLLRNALDAMRECRSRRLEVRIDAVDNQWRLSVRDNGSGIAAKDLPSIFDPFF 536 Query: 77 TSK 79 T+K Sbjct: 537 TTK 539 >gi|326436486|gb|EGD82056.1| hypothetical protein PTSG_02738 [Salpingoeca sp. ATCC 50818] Length = 1348 Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Query: 29 ELIENSLDAESSRVETVIAG-GGKSFFQITDNGFGMTSEEIP 69 ELI NS DA++ V GG++ ++ D+G GM+ EEI Sbjct: 201 ELIHNSSDADARNVRIRPKTMGGETLIELRDDGVGMSKEEID 242 >gi|94971292|ref|YP_593340.1| hypothetical protein Acid345_4266 [Candidatus Koribacter versatilis Ellin345] gi|94553342|gb|ABF43266.1| conserved hypothetical protein [Candidatus Koribacter versatilis Ellin345] Length = 529 Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 10/110 (9%) Query: 25 IAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD- 83 AI ++I+NS+ A + ++ + F I D+G GM++ + A RH S D Sbjct: 56 SAIADVIDNSISAGAQNIQIRFLPYDEPFVSILDDGIGMSARALVEA-MRHG----SQDP 110 Query: 84 --FSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS 129 + G G L S+ LT++S+ + + + Sbjct: 111 RLLRSSSDLGRFGLGLKTASLSQCRCLTVISKQNGELNARRWDLDLVEKR 160 >gi|257064075|ref|YP_003143747.1| signal transduction histidine kinase [Slackia heliotrinireducens DSM 20476] gi|256791728|gb|ACV22398.1| signal transduction histidine kinase [Slackia heliotrinireducens DSM 20476] Length = 586 Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 4/56 (7%) Query: 23 PSIAIKELIENSLD-AESSRVETVIAGGGKS--FFQITDNGFGMTSEEIPMAVQRH 75 S A++ L+EN++ AES+ V+ + G+ +++D+G G+ E+ R Sbjct: 480 LSHAVRNLLENAVRYAEST-VKVSCSQDGEGAVSIRVSDDGCGIPPEDRERVFGRF 534 >gi|116334590|ref|YP_796117.1| Signal transduction histidine kinase [Lactobacillus brevis ATCC 367] gi|116099937|gb|ABJ65086.1| Signal transduction histidine kinase [Lactobacillus brevis ATCC 367] Length = 432 Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 36/79 (45%), Gaps = 9/79 (11%) Query: 25 IAIKELIENSLDAESSR----VETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTSK 79 + LI NS+DA + + + +A + ++DNG G++ E + + T+K Sbjct: 317 SILSNLIFNSVDALAGQPHGLIHVTVADNDTTILLNVSDNGSGISPETLALIFHPGFTTK 376 Query: 80 ISDDFSNIHTFGFRGEALP 98 ++ ++ +RG L Sbjct: 377 FNEATGDV----YRGIGLS 391 >gi|315186554|gb|EFU20313.1| Heat shock protein Hsp90 [Spirochaeta thermophila DSM 6578] Length = 615 Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 62/197 (31%), Gaps = 51/197 (25%) Query: 19 IIERPSI----AIKELIENSLDA---------------E---SSRVETVIAGGGKSFFQI 56 II ++EL+ N+ DA + R++ G+S+ Q+ Sbjct: 17 IIHSLYSHREIFLRELVSNASDALDKLRFLVLTDEAYKGVPFAPRIDIRFDEEGRSYLQV 76 Query: 57 TDNGFGMTSEEI-------PMAVQRHCTSKISDDFSNIHTF------GFRGEALPSIGAV 103 D G GM +++ + S+++ D T GF S V Sbjct: 77 EDTGIGMNEQDLIENLGTIAKSGTNEFLSRLTGDAKKDATLIGQFGVGF-----YSAFMV 131 Query: 104 S-HLTLMSRPPQNNTGAQIAISGEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSE 161 + + +++R G+ + P GT V+ + F Sbjct: 132 ADRVEVLTRKAGEEKAFLWVSDGKGEYEILPAERAGHGTTVK----LYLNEQGKEFASRW 187 Query: 162 QVETNLITDVIRRMAIA 178 I +++RR + Sbjct: 188 -----RIEEIVRRYSNH 199 >gi|332367373|gb|EGJ45106.1| two component system histidine kinase [Streptococcus sanguinis SK1059] Length = 436 Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPM--AVQRHCTSKISD 82 EL++N DA+++ + +I +++ I DNG GM ++I H K SD Sbjct: 31 ELVKNGYDADATEISLIINSY-ENYIIIQDNGKGMNRDDIENKWLFVAHSEKKDSD 85 >gi|293395455|ref|ZP_06639739.1| conserved hypothetical protein [Serratia odorifera DSM 4582] gi|291422139|gb|EFE95384.1| conserved hypothetical protein [Serratia odorifera DSM 4582] Length = 999 Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 17/116 (14%) Query: 25 IAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT-SKISDD 83 AI EL++N+ DA + V+ KS F I D+G GM+ + T SK+ Sbjct: 32 TAINELLKNAHDAYADHVDIDYFR-RKSLFIIRDDGVGMSRTDFENRWLTLGTESKVQHT 90 Query: 84 FSNI----HTFGFR---GE------ALPSIGAVSHLTLMSRPPQNNTGAQIAISGE 126 +++ + FR GE A+ SIG + ++++ N I+ + Sbjct: 91 NASLPPVDESKKFRHQMGEKGIGRLAIASIGK--QVLIITKAKNTNEITAAFINWQ 144 >gi|197311443|gb|ACH61925.1| DNA gyrase beta subunit [Acholeplasma sp. N93] Length = 549 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ + G Q+TDNG G+ + Sbjct: 14 EIVDNSIDEALAGYASTIKVEVLPG--DIIQVTDNGRGIPVD 53 >gi|315640352|ref|ZP_07895468.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus italicus DSM 15952] gi|315483888|gb|EFU74368.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus italicus DSM 15952] Length = 649 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E V+ + +TD+G G+ + Sbjct: 51 EIVDNSIDEALAGFATKIEVVVEKD--NSITVTDDGRGIPVD 90 >gi|254369845|ref|ZP_04985855.1| DNA topoisomerase IV subunit B [Francisella tularensis subsp. holarctica FSC022] gi|157122804|gb|EDO66933.1| DNA topoisomerase IV subunit B [Francisella tularensis subsp. holarctica FSC022] Length = 627 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 6/51 (11%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 IE P+ I+E+I+NS+D A +S++ + + ++ D+G GM + Sbjct: 28 IENPNHLIQEIIDNSVDEVLAGFASKINITLYED--NSIEVADDGRGMPVD 76 >gi|114763658|ref|ZP_01443052.1| Hydrogen uptake histidine-kinase [Pelagibaca bermudensis HTCC2601] gi|114543659|gb|EAU46672.1| Hydrogen uptake histidine-kinase [Roseovarius sp. HTCC2601] Length = 443 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Query: 30 LIENSLDA----ESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N+LDA + V +A GG++ ++DNG G+ E+ T+K Sbjct: 342 LVQNALDAVDGGAAPEVRIDLAVQGGRARMTVSDNGPGIPDEQRAAVFDPFFTTK 396 >gi|213026862|ref|ZP_03341309.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 86 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 38/82 (46%) Query: 162 QVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNA 221 + E N I ++IRR+A+A V+ S + + +G R+ + G F+ A Sbjct: 2 KTEFNHIDEIIRRIALARFDVTLNLSHNGKLVRQYRAVAKDGQKERRLGAICGTPFLEQA 61 Query: 222 VELNEKSNEITLQGYTGIPTFN 243 + + + ++TL+G+ P Sbjct: 62 LAIEWQHGDLTLRGWVADPNHT 83 >gi|146304517|ref|YP_001191833.1| DNA topoisomerase VI subunit B [Metallosphaera sedula DSM 5348] gi|259533984|sp|A4YHK7|TOP6B_METS5 RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|145702767|gb|ABP95909.1| DNA topoisomerase VI, B subunit [Metallosphaera sedula DSM 5348] Length = 531 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 24 SIAIKELIENSLDAESS-------RVETVIAGGGKS----FFQITDNGFGMTSEEIPMAV 72 A++EL+EN+LDA + ++ +I + + DNG G+ +P A Sbjct: 33 YQALRELVENALDA--TDVHEILPSIKVIIERTSQEKEIYRLTVEDNGIGIPPHVVPDAF 90 Query: 73 QR-HCTSK 79 R +SK Sbjct: 91 GRVLYSSK 98 >gi|127511483|ref|YP_001092680.1| DNA topoisomerase IV subunit B [Shewanella loihica PV-4] gi|126636778|gb|ABO22421.1| DNA topoisomerase IV subunit B [Shewanella loihica PV-4] Length = 628 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 70/183 (38%), Gaps = 23/183 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A ++R++ ++ + ++ D+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHATRIDVILHKD--NSLEVIDDGRGMPVDIHPEEGIPGV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNN-TGAQIAISG 125 + + + H K S++ + G G + + A+S + + R A Sbjct: 88 ELILTKLHAGGKFSNNNYQ-FSGGLHGVGISVVNALSNRVEITVRRSGQVYEMAFEHGDK 146 Query: 126 EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFT 185 + +V T V P ++ S + ++R A+ P + Sbjct: 147 VEELTVTGTCGRRNTGTRV----HFWPTA-SYFDSVNFSIPKLIYLLRAKAVLCPGLRIK 201 Query: 186 FST 188 F+ Sbjct: 202 FTN 204 >gi|327395164|dbj|BAK12586.1| DNA mismatch repair protein MutL [Pantoea ananatis AJ13355] Length = 816 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 11/76 (14%) Query: 6 LSEKIINQI---AAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 L +II+ I AG + + A+ ELI NS+DA + V I G + D+G G Sbjct: 7 LDPEIIHHIIYSQAGSV----AKALIELIMNSVDAGAGAVILEITPEGFTC---RDDGHG 59 Query: 63 M-TSEEIPMAVQRHCT 77 +++++ R T Sbjct: 60 FASNDDVKRYFGRFGT 75 >gi|225691145|gb|ACO06246.1| restriction endonuclease R.BbrII [Bifidobacterium breve UCC2003] Length = 695 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 24 SIAIKELIENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEI 68 + + E + N+ DA+++ V G ITD+G GM ++ + Sbjct: 26 AAVLSEFVANAWDADANNVSIDYKPDEGSGSITITDDGCGMDTDTL 71 >gi|167744429|ref|ZP_02417203.1| hypothetical protein Bpse14_40543 [Burkholderia pseudomallei 14] Length = 544 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 29 ELIENSLDAESSRVETVI--AGGGKSFFQITDNGFGMTSEEIP 69 ELI N+ DA++S V G + + D+G GM+S++I Sbjct: 30 ELISNAYDADASNVRVEFLEQNGTPTAITVYDDGTGMSSDDIQ 72 >gi|55377343|ref|YP_135193.1| DNA topoisomerase VI subunit B [Haloarcula marismortui ATCC 43049] gi|74520118|sp|Q5V4R5|TOP6B_HALMA RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|55230068|gb|AAV45487.1| type II DNA topoisomerase VI subunit B [Haloarcula marismortui ATCC 43049] Length = 796 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 64/185 (34%), Gaps = 36/185 (19%) Query: 23 PSIAIKELIENSLDA--ESS---RVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQR-- 74 A+KE ++N+LDA E+ + I G + DNG G+T E+ P + Sbjct: 47 LVTAVKEAVDNALDACEEAGILPDIYVEIQESGDYYKLVVEDNGPGITKEQAPKIFGKLL 106 Query: 75 -----HCTSKISDDFSNIHTFGFRGEALPSIGAV--SHLT------LMSRPPQNNTGAQI 121 H G +G + AV S LT + SRP + Sbjct: 107 YGSRFHA---------REQNRGQQGIGIS--AAVLYSQLTSGKPAKITSRPKGQDEAQYF 155 Query: 122 AISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 + + ++ ++++ T E L + + + L D I+ A+ P Sbjct: 156 ELIVDTDTNEPEISVDETTTWE---RPHGTRIELEMEANMRARSTL-RDYIQDTAVVNPH 211 Query: 182 VSFTF 186 F Sbjct: 212 ARVEF 216 >gi|89256995|ref|YP_514357.1| DNA topoisomerase IV subunit B [Francisella tularensis subsp. holarctica LVS] gi|115315355|ref|YP_764078.1| DNA topoisomerase IV subunit B [Francisella tularensis subsp. holarctica OSU18] gi|156503195|ref|YP_001429260.1| DNA topoisomerase IV subunit B [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009376|ref|ZP_02274307.1| DNA topoisomerase IV, B subunit [Francisella tularensis subsp. holarctica FSC200] gi|290954484|ref|ZP_06559105.1| DNA topoisomerase IV subunit B [Francisella tularensis subsp. holarctica URFT1] gi|295312089|ref|ZP_06802902.1| DNA topoisomerase IV subunit B [Francisella tularensis subsp. holarctica URFT1] gi|89144826|emb|CAJ80165.1| Topoisomerase IV, subunit B [Francisella tularensis subsp. holarctica LVS] gi|115130254|gb|ABI83441.1| DNA topoisomerase (ATP-hydrolyzing) [Francisella tularensis subsp. holarctica OSU18] gi|156253798|gb|ABU62304.1| DNA topoisomerase IV, B subunit [Francisella tularensis subsp. holarctica FTNF002-00] Length = 627 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 6/51 (11%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 IE P+ I+E+I+NS+D A +S++ + + ++ D+G GM + Sbjct: 28 IENPNHLIQEIIDNSVDEVLAGFASKINITLYED--NSIEVADDGRGMPVD 76 >gi|94263941|ref|ZP_01287744.1| ATP-binding region, ATPase-like [delta proteobacterium MLMS-1] gi|93455686|gb|EAT05865.1| ATP-binding region, ATPase-like [delta proteobacterium MLMS-1] Length = 1001 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 10/62 (16%) Query: 12 NQIAAGEIIERPSIAIKELIENSLDAESSRVETV-IAGGG---KSFFQITDNGFGMTSEE 67 QIA I+ A+ EL +N+ DA + V G K F + D+G GMT E+ Sbjct: 17 QQIA---TIQN---ALSELFKNAHDAYAQHVRVDYFEDAGPGDKGFIIVRDDGVGMTRED 70 Query: 68 IP 69 Sbjct: 71 FE 72 >gi|303272129|ref|XP_003055426.1| bromodomain-containing protein [Micromonas pusilla CCMP1545] gi|226463400|gb|EEH60678.1| bromodomain-containing protein [Micromonas pusilla CCMP1545] Length = 193 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Query: 23 PSIAIKELIENSLD--AESSRVETVIAG--GGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 P A+ EL++N+ D ++ V + G + D+G GM + + +S Sbjct: 8 PLGALAELLDNAQDQECGATEVHVDVVNVAPGVPAITVQDDGVGMARANLHCMLSFGFSS 67 Query: 79 K 79 K Sbjct: 68 K 68 >gi|313672758|ref|YP_004050869.1| pas/pac sensor hybrid histidine kinase [Calditerrivibrio nitroreducens DSM 19672] gi|312939514|gb|ADR18706.1| PAS/PAC sensor hybrid histidine kinase [Calditerrivibrio nitroreducens DSM 19672] Length = 649 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 25/102 (24%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDA--ES--SRVETVIAGGGKS----- 52 KI + +I I G+I S + +I N++DA S ++ + S Sbjct: 372 KINISDKSLIANIDTGQI----SQVLINMIVNAVDAVKNSEVKKIIIDVDNCSISKRMVE 427 Query: 53 ------------FFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 +I+D G G+ E++ + T+K+ Sbjct: 428 EKFIDLQPGEYILIEISDTGCGIPKEDLKKIFEPFYTTKLDS 469 >gi|227523612|ref|ZP_03953661.1| signal transduction histidine kinase [Lactobacillus hilgardii ATCC 8290] gi|227089228|gb|EEI24540.1| signal transduction histidine kinase [Lactobacillus hilgardii ATCC 8290] Length = 432 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 19/93 (20%) Query: 25 IAIKELIENSLDA---ESS-RVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 + LI NS+DA +++ + + + ++DNG GM E + M + T+K Sbjct: 317 SILSNLIFNSVDAMDDKANGLIRVTVADDNDQIIINVSDNGSGMDQETLAMIFEPGFTTK 376 Query: 80 ISDDFSNIHTFG--FRGEALPSIGAVSHLTLMS 110 + + G +RG L SH+ +++ Sbjct: 377 FDE------STGVVYRGIGL------SHVKIIT 397 >gi|227508406|ref|ZP_03938455.1| signal transduction histidine kinase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227511413|ref|ZP_03941462.1| signal transduction histidine kinase [Lactobacillus buchneri ATCC 11577] gi|227085364|gb|EEI20676.1| signal transduction histidine kinase [Lactobacillus buchneri ATCC 11577] gi|227192056|gb|EEI72123.1| signal transduction histidine kinase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 432 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 19/93 (20%) Query: 25 IAIKELIENSLDA---ESS-RVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 + LI NS+DA +++ + + + ++DNG GM E + M + T+K Sbjct: 317 SILSNLIFNSVDAMDDKANGLIRVTVADDNDQIIINVSDNGSGMDQETLAMIFEPGFTTK 376 Query: 80 ISDDFSNIHTFG--FRGEALPSIGAVSHLTLMS 110 + + G +RG L SH+ +++ Sbjct: 377 FDE------STGVVYRGIGL------SHVKIIT 397 >gi|20090445|ref|NP_616520.1| DNA topoisomerase VI subunit B [Methanosarcina acetivorans C2A] gi|23822278|sp|Q8TQF7|TOP6B_METAC RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|19915460|gb|AAM05000.1| DNA topoisomerase subunit B [Methanosarcina acetivorans C2A] Length = 621 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 67/213 (31%), Gaps = 50/213 (23%) Query: 27 IKELIENSLDA--ESS---RVETVIAGGGKSFFQI--TDNGFGMTSEEIPMAV------Q 73 +KE ++NSLDA E+ + + G+ + + DNG G+ E+IP Sbjct: 42 VKEAVDNSLDACEEAGILPDILVQVERTGQDYVTVIIEDNGPGIVREQIPKVFAKLLYGS 101 Query: 74 RHCTSKISDDFSNIHTFGFRGEALPSIGAV--SHLT------LMSRPPQNNTGAQIAISG 125 R K + G +G + AV + +T ++S+ N + Sbjct: 102 RFHALK--------QSRGQQGIGIS--AAVLYAQMTAGRHTKILSKTGSNVPAHYYELMI 151 Query: 126 EK--------ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + VR GT +E+ + R I + ++ AI Sbjct: 152 NTSTNEPDILMDEVRDWFRPHGTQIELEMKAAYVKGRRQS----------IYEYLKATAI 201 Query: 178 AYPKVSFTFST-IKSNRYKMNFQSTNGNFPERI 209 P T + + E I Sbjct: 202 VNPHARITLIDPDGNEEVFERATDKIPDPAEEI 234 >gi|323350985|ref|ZP_08086642.1| hypothetical protein HMPREF9398_0690 [Streptococcus sanguinis VMC66] gi|322122709|gb|EFX94418.1| hypothetical protein HMPREF9398_0690 [Streptococcus sanguinis VMC66] Length = 676 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 EL+ NS DA ++RV+ ++ I DNG G++ EE+ Sbjct: 30 ELVANSYDAYATRVDIHLSD---DSISIVDNGKGLSFEELE 67 >gi|312872743|ref|ZP_07732808.1| DNA gyrase, B subunit [Lactobacillus iners LEAF 2062A-h1] gi|311091785|gb|EFQ50164.1| DNA gyrase, B subunit [Lactobacillus iners LEAF 2062A-h1] Length = 653 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 6/51 (11%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 I+ + E+I+NS+D A ++++E + G + D+G G+ + Sbjct: 48 IQGLHHLVWEIIDNSIDEKLAGFATKIEITVNEDG--SVTVEDDGRGIPVD 96 >gi|312874887|ref|ZP_07734906.1| DNA gyrase, B subunit [Lactobacillus iners LEAF 2053A-b] gi|311089632|gb|EFQ48057.1| DNA gyrase, B subunit [Lactobacillus iners LEAF 2053A-b] Length = 653 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 6/51 (11%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 I+ + E+I+NS+D A ++++E + G + D+G G+ + Sbjct: 48 IQGLHHLVWEIIDNSIDEKLAGFATKIEITVNEDG--SVTVEDDGRGIPVD 96 >gi|309809774|ref|ZP_07703628.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Lactobacillus iners SPIN 2503V10-D] gi|308169953|gb|EFO71992.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Lactobacillus iners SPIN 2503V10-D] Length = 240 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 6/51 (11%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 I+ + E+I+NS+D A ++++E + G + D+G G+ + Sbjct: 48 IQGLHHLVWEIIDNSIDEKLAGFATKIEITVNEDG--SVTVEDDGRGIPVD 96 >gi|309804841|ref|ZP_07698903.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Lactobacillus iners LactinV 09V1-c] gi|308165780|gb|EFO68001.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Lactobacillus iners LactinV 09V1-c] Length = 240 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 6/51 (11%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 I+ + E+I+NS+D A ++++E + G + D+G G+ + Sbjct: 48 IQGLHHLVWEIIDNSIDEKLAGFATKIEITVNEDG--SVTVEDDGRGIPVD 96 >gi|259500773|ref|ZP_05743675.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus iners DSM 13335] gi|302190776|ref|ZP_07267030.1| DNA gyrase, B subunit [Lactobacillus iners AB-1] gi|309804063|ref|ZP_07698144.1| DNA gyrase, B subunit [Lactobacillus iners LactinV 11V1-d] gi|309805911|ref|ZP_07699943.1| DNA gyrase, B subunit [Lactobacillus iners LactinV 03V1-b] gi|309807813|ref|ZP_07701745.1| DNA gyrase, B subunit [Lactobacillus iners LactinV 01V1-a] gi|312871188|ref|ZP_07731286.1| DNA gyrase, B subunit [Lactobacillus iners LEAF 3008A-a] gi|312873296|ref|ZP_07733351.1| DNA gyrase, B subunit [Lactobacillus iners LEAF 2052A-d] gi|315654135|ref|ZP_07907051.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus iners ATCC 55195] gi|325912201|ref|ZP_08174598.1| DNA gyrase, B subunit [Lactobacillus iners UPII 143-D] gi|325913628|ref|ZP_08175990.1| DNA gyrase, B subunit [Lactobacillus iners UPII 60-B] gi|329919730|ref|ZP_08276681.1| DNA gyrase, B subunit [Lactobacillus iners SPIN 1401G] gi|259167467|gb|EEW51962.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus iners DSM 13335] gi|308163831|gb|EFO66097.1| DNA gyrase, B subunit [Lactobacillus iners LactinV 11V1-d] gi|308167687|gb|EFO69834.1| DNA gyrase, B subunit [Lactobacillus iners LactinV 03V1-b] gi|308168915|gb|EFO71001.1| DNA gyrase, B subunit [Lactobacillus iners LactinV 01V1-a] gi|311091176|gb|EFQ49565.1| DNA gyrase, B subunit [Lactobacillus iners LEAF 2052A-d] gi|311093202|gb|EFQ51548.1| DNA gyrase, B subunit [Lactobacillus iners LEAF 3008A-a] gi|315488831|gb|EFU78477.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus iners ATCC 55195] gi|325475860|gb|EGC79029.1| DNA gyrase, B subunit [Lactobacillus iners UPII 143-D] gi|325476987|gb|EGC80137.1| DNA gyrase, B subunit [Lactobacillus iners UPII 60-B] gi|328937077|gb|EGG33505.1| DNA gyrase, B subunit [Lactobacillus iners SPIN 1401G] Length = 653 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 6/51 (11%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 I+ + E+I+NS+D A ++++E + G + D+G G+ + Sbjct: 48 IQGLHHLVWEIIDNSIDEKLAGFATKIEITVNEDG--SVTVEDDGRGIPVD 96 >gi|237801661|ref|ZP_04590122.1| DNA gyrase subunit B [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024520|gb|EGI04576.1| DNA gyrase subunit B [Pseudomonas syringae pv. oryzae str. 1_6] Length = 805 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 78/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q I G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYIHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ + K+ +++ IR ++ V +S + + Sbjct: 161 ESDSTGTQIH-----FKPSADTFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNEVFHFNIQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|254497819|ref|ZP_05110586.1| DNA topoisomerase IV subunit B [Legionella drancourtii LLAP12] gi|254352950|gb|EET11718.1| DNA topoisomerase IV subunit B [Legionella drancourtii LLAP12] Length = 629 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 92/252 (36%), Gaps = 29/252 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE---EIPMAVQ 73 RP+ +E+I+NS+D A ++ + + G ++ D+G GM + ++ ++ Sbjct: 32 TRPNHLAQEVIDNSVDEVLAGFATHITVTLHEDG--SVEVEDDGRGMPVDLHPQLGLSGV 89 Query: 74 R------HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQ---NNTGAQIAI 123 H K SD + + G G + + A+S L + + + A Sbjct: 90 EVIMTRLHAGGKFSDKNYS-FSGGLHGVGVSVVNALSDRLEVTIKRNGIVYQMSFANGDK 148 Query: 124 SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 + E + GT + + + ++ +T ++R A+ +S Sbjct: 149 TCELNEIGITKKRDTGTTIRFW-------PNAKYFDTTRISIKHLTHILRAKAVLCTGLS 201 Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFN 243 TF K+N + ++ +G + ++Q +G+ + + N Sbjct: 202 MTF-INKTNNEESHWCYEHG-LVDYMNQSLGDGDYLPEEPFAGEFKSDDATVDWALVWSN 259 Query: 244 RGNANQFYVFIN 255 +A ++N Sbjct: 260 GASAGFSESYVN 271 >gi|312622467|ref|YP_004024080.1| histidine kinase [Caldicellulosiruptor kronotskyensis 2002] gi|312202934|gb|ADQ46261.1| histidine kinase [Caldicellulosiruptor kronotskyensis 2002] Length = 185 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Query: 30 LIENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCT 77 L++NS++A +S V+ I K I DNG G+ + I T Sbjct: 11 LVQNSIEAGASLVKIEIVEDLKEDLFTITIEDNGRGIPKDVIDKVTDPFYT 61 >gi|222529287|ref|YP_002573169.1| histidine kinase [Caldicellulosiruptor bescii DSM 6725] gi|222456134|gb|ACM60396.1| histidine kinase [Caldicellulosiruptor bescii DSM 6725] Length = 185 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Query: 30 LIENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCT 77 L++NS++A +S V+ I K I DNG G+ + I T Sbjct: 11 LVQNSIEAGASLVKIEIVEDLKEDLFTITIEDNGRGIPKDVIDKVTDPFYT 61 >gi|83311381|ref|YP_421645.1| uptake hydrogenase [Magnetospirillum magneticum AMB-1] gi|82946222|dbj|BAE51086.1| uptake hydrogenase [Magnetospirillum magneticum AMB-1] Length = 442 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 9/79 (11%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSR----VETVIA-GGGKSFFQITDNG 60 L + + + G+ I LIEN+LDA + R VE GG++ I DNG Sbjct: 325 LPDHLAVRGNPGQ----LHQVIVNLIENALDAVAGRPDGRVEVTGKAEGGQTVLTIADNG 380 Query: 61 FGMTSEEIPMAVQRHCTSK 79 G+ + + T+K Sbjct: 381 PGIPPDIVGKVFDPFFTTK 399 >gi|73539890|ref|YP_294410.1| sensory histidine kinase CreC [Ralstonia eutropha JMP134] gi|72117303|gb|AAZ59566.1| ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal [Ralstonia eutropha JMP134] Length = 481 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 30 LIENSLD---AESSR-VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L+EN+LD A S+ ++ A G+ Q+ D+G G+ +P +R Sbjct: 381 LLENALDFAPAGSTVLIDVTGAPAGQIAIQVADDGPGIPDYALPRLFERFY 431 >gi|315427860|dbj|BAJ49452.1| DNA topoisomerase VI subunit B [Candidatus Caldiarchaeum subterraneum] Length = 158 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 33/86 (38%) Query: 27 IKELIENSLDA---ESSRV--ETVIAGG------GKSFFQITDNGFGMTSEEIPMAVQRH 75 I+EL+ENSLDA R+ E +I G G ++ DNG G+ ++IP A Sbjct: 43 IRELVENSLDAAEMG--RILPEVLIELGEEDSERGVYRLRVVDNGVGVPGDKIPSAF--- 97 Query: 76 CT----SKISDDFSNIHTFGF---RG 94 T SK +GF RG Sbjct: 98 ATVLYGSK----------YGFKQSRG 113 >gi|315426179|dbj|BAJ47823.1| DNA topoisomerase VI subunit B [Candidatus Caldiarchaeum subterraneum] Length = 520 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 33/86 (38%) Query: 27 IKELIENSLDA---ESSRV--ETVIAGG------GKSFFQITDNGFGMTSEEIPMAVQRH 75 I+EL+ENSLDA R+ E +I G G ++ DNG G+ ++IP A Sbjct: 45 IRELVENSLDAAEMG--RILPEVLIELGEEDSERGVYRLRVVDNGVGVPGDKIPSAF--- 99 Query: 76 CT----SKISDDFSNIHTFGF---RG 94 T SK +GF RG Sbjct: 100 ATVLYGSK----------YGFKQSRG 115 >gi|169247658|gb|ACA51658.1| hypothetical protein [Thermoanaerobacterium saccharolyticum] Length = 181 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 10/60 (16%) Query: 28 KEL-------IENSLDAESSRVETVIA-GGGKSFFQ--ITDNGFGMTSEEIPMAVQRHCT 77 KEL +NS+ A + + + K F + I D+G GM E + A T Sbjct: 2 KELSLYILDIAQNSIKAGAKNISIKLEIDHKKDFMRLSIEDDGCGMDDELLKKAFDPFTT 61 >gi|160880259|ref|YP_001559227.1| integral membrane sensor signal transduction histidine kinase [Clostridium phytofermentans ISDg] gi|160428925|gb|ABX42488.1| integral membrane sensor signal transduction histidine kinase [Clostridium phytofermentans ISDg] Length = 464 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 16/101 (15%) Query: 21 ERPSIAIKELIENSL----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 ER S I L+ N++ D ++ + + Q+ DNG G+ EE+P +R Sbjct: 356 ERISQVIINLLSNAIKYTPDFG--KIVISLEDYETNLVIQMKDNGIGIPEEELPFIFERF 413 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAV-----SHLTLMSR 111 D S G G L + +V + + S+ Sbjct: 414 Y----RADKSRNRRTGGAGIGLAIVKSVVHSHGGKVEVSSK 450 >gi|330964178|gb|EGH64438.1| DNA gyrase subunit B [Pseudomonas syringae pv. actinidiae str. M302091] Length = 805 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 78/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q I G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYIHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ + K+ +++ IR ++ V +S + + Sbjct: 161 ESDSTGTQIH-----FKPSADTFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNEVFHFNVQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|330876358|gb|EGH10507.1| DNA gyrase subunit B [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 805 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 78/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q I G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYIHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ + K+ +++ IR ++ V +S + + Sbjct: 161 ESDSTGTQIH-----FKPSADTFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNEVFHFNVQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|295694967|ref|YP_003588205.1| integral membrane sensor signal transduction histidine kinase [Bacillus tusciae DSM 2912] gi|295410569|gb|ADG05061.1| integral membrane sensor signal transduction histidine kinase [Bacillus tusciae DSM 2912] Length = 371 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 7/61 (11%) Query: 21 ERPSIAIKELIENSLDAESS----RVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 ER + + L+ N+L +++ +V G +I D G G+ +E+ +R Sbjct: 252 ERLTQVVTNLLSNAL--KATPQEGKVTVSAETAGVWRVIRIQDTGRGIPPQELAKVFERF 309 Query: 76 C 76 Sbjct: 310 Y 310 >gi|83859005|ref|ZP_00952526.1| heat shock protein G homolog [Oceanicaulis alexandrii HTCC2633] gi|83852452|gb|EAP90305.1| heat shock protein G homolog [Oceanicaulis alexandrii HTCC2633] Length = 666 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 47/114 (41%), Gaps = 13/114 (11%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS--KI 80 P+ + E++ N+ DA++ +V+ I I D+G GM + + R T K Sbjct: 28 PA-VLSEVVANAWDADAKKVQVTIDKV-AETITIEDDGTGMDRD---GVIDRFLTVGFKR 82 Query: 81 SDDFSNIHTF-----GFRGEALPSIGAVSHL-TLMSRPPQNNTGAQIAISGEKI 128 D+ ++ G +G SI +V+ + + + + T ++ + Sbjct: 83 RDELGDVTALGRKPMGRKGIGKLSIFSVAQVAEVFTTLDGDRTAFRMDREVIRK 136 >gi|28867247|ref|NP_789866.1| DNA gyrase subunit B [Pseudomonas syringae pv. tomato str. DC3000] gi|213968438|ref|ZP_03396581.1| DNA gyrase, subunit B [Pseudomonas syringae pv. tomato T1] gi|301384274|ref|ZP_07232692.1| DNA gyrase subunit B [Pseudomonas syringae pv. tomato Max13] gi|302063876|ref|ZP_07255417.1| DNA gyrase subunit B [Pseudomonas syringae pv. tomato K40] gi|302131959|ref|ZP_07257949.1| DNA gyrase subunit B [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28850481|gb|AAO53561.1| DNA gyrase, subunit B [Pseudomonas syringae pv. tomato str. DC3000] gi|213926726|gb|EEB60278.1| DNA gyrase, subunit B [Pseudomonas syringae pv. tomato T1] gi|331017722|gb|EGH97778.1| DNA gyrase subunit B [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 805 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 77/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q I G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYIHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ K+ +++ IR ++ V +S + + Sbjct: 161 ESDSTGTQIH-----FKPSAETFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNEVFHFNVQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|323343849|ref|ZP_08084076.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella oralis ATCC 33269] gi|323095668|gb|EFZ38242.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella oralis ATCC 33269] Length = 672 Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats. Identities = 33/254 (12%), Positives = 76/254 (29%), Gaps = 41/254 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQ--------- 73 + E ++NS+D A + +E I + DNG G+ +E + Sbjct: 60 VNETVDNSIDEAMAGYCTDIEVTINED--ESITVQDNGRGIPVDEHKKLHKSALEVVMTV 117 Query: 74 RHCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEK 127 H K + + G G AL S ++S+ ++ Q K Sbjct: 118 LHAGGKFDKGSYKV-SGGLHGVGVSCVNALSS-------HMLSQVFRDGKIYQQEYEKGK 169 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFS 187 V + + + + ++I +R +A + T + Sbjct: 170 PLYPVKVMGTTDKRGTRQQFW----PDKTIFTTIHYQWDIIARRMRELAYLNAGIKITLT 225 Query: 188 T---IKSNRYKMNFQSTNGNFPERISQV--IGEDFINNAVELNEKSNEITLQGYTGIPTF 242 + + ++ E + V ++ + L + I ++ + Sbjct: 226 DLRANEEGKPRVEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAI---MY 282 Query: 243 NRGNANQFYVFING 256 N + + ++N Sbjct: 283 NTDYSENIHSYVNN 296 >gi|229489312|ref|ZP_04383176.1| ATPase [Rhodococcus erythropolis SK121] gi|229323805|gb|EEN89562.1| ATPase [Rhodococcus erythropolis SK121] Length = 505 Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQ--ITDN 59 KI E + I I + A+ +LI+NSLDA +S V G + DN Sbjct: 13 KIFAADESLAGAIGLHHTI---ATALADLIDNSLDAAASHVLIRFVQDGTRIVSMMVIDN 69 Query: 60 GFGMTSEEIPMA 71 G GM S+ I A Sbjct: 70 GSGMDSDTIDSA 81 >gi|255530846|ref|YP_003091218.1| ATPase [Pedobacter heparinus DSM 2366] gi|255343830|gb|ACU03156.1| ATPase [Pedobacter heparinus DSM 2366] Length = 486 Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 15/92 (16%) Query: 30 LIENSLDAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC----TSKISDD 83 LI+NS+ A+++++ + SF +I DNG GM +++ A++ T + DD Sbjct: 36 LIDNSISAKATKINISFGVDRY-ASFVRIEDNGTGMNEKQLRDAMRLGSLNPLTERSDDD 94 Query: 84 FSNIHTFGFRGEAL--PSIGAVSHLTLMSRPP 113 G G L S T+ ++ Sbjct: 95 L------GRFGLGLKTASFAQCRRFTVKTKKA 120 >gi|222152812|ref|YP_002561989.1| DNA gyrase subunit B [Streptococcus uberis 0140J] gi|222113625|emb|CAR41503.1| DNA gyrase subunit B [Streptococcus uberis 0140J] Length = 650 Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ +E I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFATHIEVFIEED--NSITVVDDGRGIPVD 90 >gi|126731309|ref|ZP_01747116.1| C4-dicarboxylate transport sensor protein DctB, putative [Sagittula stellata E-37] gi|126708220|gb|EBA07279.1| C4-dicarboxylate transport sensor protein DctB, putative [Sagittula stellata E-37] Length = 586 Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 19/105 (18%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N+LDA ++ VE ++A G + + DNG G+ E++ + Sbjct: 476 RIEQVLVNLLRNALDA--TKSVDDPQVEIILAAGETATLSVRDNGDGI--EDLDALFEPF 531 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHL--TLMSRPPQNNTG 118 T+K D + G A+ S G VS L L +R ++ Sbjct: 532 YTTKAPGDGVGL------GLAISS-GIVSELGGRLTARNGEDGGA 569 >gi|301629588|ref|XP_002943920.1| PREDICTED: DNA gyrase subunit B-like [Xenopus (Silurana) tropicalis] Length = 554 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 77/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 46 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 103 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L +++ Q + G ++ V Sbjct: 104 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLVLTVRRSGKIWEQTYVHGVPQEPMKIVG 162 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ K+ +++ IR ++ V +S + + Sbjct: 163 ESETTGTQIH-----FRPSDETFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 217 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V E + + N F N Sbjct: 218 LFKY--EGGLRAFVEYLNTNKTAVNQVFHFNIQREDGIGVEIALQW-NDSFNENLLCFTN 274 Query: 256 GRTVQD 261 +D Sbjct: 275 NIPQRD 280 >gi|171185843|ref|YP_001794762.1| DNA topoisomerase VI subunit B [Thermoproteus neutrophilus V24Sta] gi|170935055|gb|ACB40316.1| DNA topoisomerase VI, B subunit [Thermoproteus neutrophilus V24Sta] Length = 530 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 10/65 (15%) Query: 27 IKELIENSLDAESS-----RV--ETVIAGGGKSFFQI--TDNGFGMTSEEIPMAVQR-HC 76 I+EL ENSLDA + + + K + + DNG G+ EIP R Sbjct: 36 IRELTENSLDATETYGILPNIYLRINVEDEQKGWVSVYAEDNGIGIPGNEIPNVFGRVFY 95 Query: 77 TSKIS 81 +SK Sbjct: 96 SSKYR 100 >gi|17556805|ref|NP_498104.1| MORC (mouse microrchidia) family CW-type zinc finger protein family member (morc-1) [Caenorhabditis elegans] gi|4885042|gb|AAD31935.1|U00064_7 Morc (mouse microrchidia) family cw-type zinc finger protein protein 1, confirmed by transcript evidence [Caenorhabditis elegans] Length = 845 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Query: 23 PSIAIKELIENSLDAESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 P AI EL++N+ DA++ + + F ++ D+G GM EE A+ ++K S Sbjct: 33 PLSAIAELVDNAYDADARDLHIDFLDINNEQFLELRDDGLGMAREEALHAITFGHSAKCS 92 Query: 82 DDFSNIHTFG 91 I +G Sbjct: 93 ---YKIGRYG 99 >gi|115381158|gb|ABI96228.1| DNA gyrase subunit B [Spiroplasma alleghenense] Length = 552 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 50/358 (13%), Positives = 110/358 (30%), Gaps = 62/358 (17%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT--------SEEIPMAVQ-RH 75 E+I+NS+D A ++ + VI + + DNG G+ + H Sbjct: 14 EIIDNSIDETLAGFANTITVVITNN--NEIIVKDNGRGIPIDIHPETKKSALETVFTVLH 71 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K S D I + G G +V + + R V Sbjct: 72 AGGKFSSDTYKI-SGGLHGVG----ASV---------VNALSLYVEVMVLRDNKIHRQVF 117 Query: 136 MNPGTIVEVRDLFFTIPARLNFLK----------SEQVETNLITDVIRRMAIAYPKVSFT 185 + GT + ++ + +K + + I + +++MA V+ Sbjct: 118 SDGGTKISALEIIGNTDVQGTLVKFKPDPEIFKETINFDFKTIQNKLKQMAFLNRGVTIN 177 Query: 186 FSTIKSNR-YKMNFQSTNGNFPERISQ----------VIGEDFINNAVELNEKSNEITLQ 234 +S++ NF++ ++ I+ + E F + A+E + N+ + Sbjct: 178 LYDQRSDKEISYNFENGIEDYVTEINSGKNKINENVFSVNESFNDIAIEFAMQYNDSYTE 237 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQ 294 N + R K I + + + + ++ Sbjct: 238 NLFS-FCNNIFTSEGGTHEEGLRQALVKVINNYLNESTKNV---KKTKFTWDDIKEGIVC 293 Query: 295 VDVNVH-----PAKSYIRFRNPT---IIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 V H ++ + N + I + ++ + K + ++ K M+S Sbjct: 294 VLSIKHMDPQFEGQTKAKLSNLDAKEAVNQVITEKLKDYLLKNPEDSKKIIEKNMLSQ 351 >gi|330970328|gb|EGH70394.1| DNA gyrase subunit B [Pseudomonas syringae pv. aceris str. M302273PT] Length = 805 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 77/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDETLAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q + G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ K+ +++ IR ++ V +S + + Sbjct: 161 ESDSTGTQIH-----FKPSAETFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNEVFHFNIQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|302185843|ref|ZP_07262516.1| DNA gyrase subunit B [Pseudomonas syringae pv. syringae 642] Length = 805 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 77/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q + G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ K+ +++ IR ++ V +S + + Sbjct: 161 ESDSTGTQIH-----FKPSAETFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNEVFHFNIQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|160914817|ref|ZP_02077031.1| hypothetical protein EUBDOL_00824 [Eubacterium dolichum DSM 3991] gi|158433357|gb|EDP11646.1| hypothetical protein EUBDOL_00824 [Eubacterium dolichum DSM 3991] Length = 648 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ +E I + ++ DNG GM Sbjct: 57 EIVDNSIDEALAGFATDIEIAIEKD--NVIRVEDNGRGMP 94 >gi|66043275|ref|YP_233116.1| DNA gyrase subunit B [Pseudomonas syringae pv. syringae B728a] gi|289677553|ref|ZP_06498443.1| DNA gyrase subunit B [Pseudomonas syringae pv. syringae FF5] gi|63253982|gb|AAY35078.1| DNA gyrase, B subunit [Pseudomonas syringae pv. syringae B728a] gi|330937293|gb|EGH41304.1| DNA gyrase subunit B [Pseudomonas syringae pv. pisi str. 1704B] Length = 805 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 77/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q + G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ K+ +++ IR ++ V +S + + Sbjct: 161 ESDSTGTQIH-----FKPSAETFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNEVFHFNIQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|296160389|ref|ZP_06843206.1| histidine kinase [Burkholderia sp. Ch1-1] gi|295889370|gb|EFG69171.1| histidine kinase [Burkholderia sp. Ch1-1] Length = 666 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 7/64 (10%) Query: 22 RPSIAIKELIENSLDAESS------RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N+LDA + +E +A SF ++DNG G+ + +P + Sbjct: 546 RLEQVLINLLGNALDATADIDSPRISIEIEVADANLSFV-VSDNGPGIADDVLPRLFEPF 604 Query: 76 CTSK 79 T+K Sbjct: 605 FTTK 608 >gi|256830398|ref|YP_003159126.1| histidine kinase [Desulfomicrobium baculatum DSM 4028] gi|256579574|gb|ACU90710.1| histidine kinase [Desulfomicrobium baculatum DSM 4028] Length = 566 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 26/91 (28%) Query: 3 IRK-LSEKIINQIAAGEIIERPS---IAIKELIENSLDAESSRVETVIAGGGKSF----- 53 IR L AGE+ P+ I L+ N++DA G Sbjct: 442 IRLSLDPN------AGEVDSSPAEIQQIILNLVNNAIDA------IEHDDGMVQLRSFRE 489 Query: 54 -----FQITDNGFGMTSEEIPMAVQRHCTSK 79 + DNG G+ ++ +P + T+K Sbjct: 490 HSFVRIDVEDNGQGIPADILPQIFEPFFTTK 520 >gi|187922526|ref|YP_001894168.1| histidine kinase [Burkholderia phytofirmans PsJN] gi|187713720|gb|ACD14944.1| histidine kinase [Burkholderia phytofirmans PsJN] Length = 666 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 7/64 (10%) Query: 22 RPSIAIKELIENSLDAESS------RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N+LDA + +E +A SF ++DNG G+ + +P + Sbjct: 546 RLEQVLINLLGNALDATADLHPPRISIEIEVADANLSFV-VSDNGPGIADDVLPRLFEPF 604 Query: 76 CTSK 79 T+K Sbjct: 605 FTTK 608 >gi|260804471|ref|XP_002597111.1| hypothetical protein BRAFLDRAFT_76358 [Branchiostoma floridae] gi|229282374|gb|EEN53123.1| hypothetical protein BRAFLDRAFT_76358 [Branchiostoma floridae] Length = 725 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 18/114 (15%) Query: 29 ELIENSLDAESSRV-------ETVIAG---GGKSFFQITDNGFGMTSEEI-PMAVQRHCT 77 ELI+N+L A + V ++ GGK + DNG GMTS+++ AV R Sbjct: 143 ELIDNALAATADNVGDRNIELRIILDDRIEGGKHCICVLDNGHGMTSKDLNDWAVYRL-- 200 Query: 78 SKI-SDDFSNIHTF---GFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEK 127 SK D + G RG + A +T+ +R T + + + Sbjct: 201 SKFNRKDRRRSTGYSGPGMRGRGGAAQSA-PQVTVDTRTRAEPTAGESELGFWR 253 >gi|320353148|ref|YP_004194487.1| hypothetical protein Despr_1024 [Desulfobulbus propionicus DSM 2032] gi|320121650|gb|ADW17196.1| hypothetical protein Despr_1024 [Desulfobulbus propionicus DSM 2032] Length = 587 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Query: 25 IAIKELIENSLDAESSRVETVIAGGGKSF---FQITDNGFGMTSEEIP 69 AIKEL++N+ DA++ RV+ + + + D+G GM EE+ Sbjct: 25 NAIKELVDNAWDADAERVKVFLPEP-LTVNPEIIVEDDGTGMIEEELR 71 >gi|315222619|ref|ZP_07864508.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Streptococcus anginosus F0211] gi|315188305|gb|EFU22031.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Streptococcus anginosus F0211] Length = 722 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 20 IERPSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSE 66 I+ A+ EL++NS DA++S V+ I + + D+G GM+ + Sbjct: 20 IKDLPAALVELVKNSYDADASYVKITYIKNEDRLNIIVEDDGHGMSQD 67 >gi|221369828|ref|YP_002520924.1| hypothetical protein RSKD131_3991 [Rhodobacter sphaeroides KD131] gi|221162880|gb|ACM03851.1| Hypothetical Protein RSKD131_3991 [Rhodobacter sphaeroides KD131] Length = 634 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 26/51 (50%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQ 73 P A +ELI N+ DA+++RV + D+G GM +E + ++ Sbjct: 48 PWAAFRELIANAYDADATRVIVDTGAPDFQQVSVRDDGHGMNAETLAYVLK 98 >gi|300790455|ref|YP_003770746.1| two-component system histidine kinase [Amycolatopsis mediterranei U32] gi|299799969|gb|ADJ50344.1| two-component system histidine kinase [Amycolatopsis mediterranei U32] Length = 445 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Query: 5 KLSEK---IINQIAAGEIIE----RPSIAIKELIENSLDAESSRVETVI-AGGGKSFFQI 56 +L + +I A +++ R ++ L++N+ +SRV + GG + Sbjct: 316 RLPRDGVEVRTEIRADPVVQGHAGRLERVLRNLVDNAERHAASRVTITLTEAGGHGVLTV 375 Query: 57 TDNGFGMTSEEIPMAVQRH 75 D+G G+ +E R Sbjct: 376 RDDGPGIPAEHRERVFDRF 394 >gi|294661429|ref|YP_003579882.1| DNA topoisomerase II large subunit [Klebsiella phage KP15] gi|292660590|gb|ADE34838.1| DNA topoisomerase II large subunit [Klebsiella phage KP15] Length = 632 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 10/59 (16%) Query: 18 EIIERPSIAIKELIENSLD-A------ESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 E +E I E+++NS+D A +++++ I +I+DNG G+ +++ Sbjct: 65 EYVEGLVKIINEILDNSIDEAIRTEFKHANKIDVTIDHN---LVKISDNGRGIPQDDVK 120 >gi|156744114|ref|YP_001434243.1| DNA gyrase subunit B [Roseiflexus castenholzii DSM 13941] gi|156235442|gb|ABU60225.1| DNA gyrase, B subunit [Roseiflexus castenholzii DSM 13941] Length = 653 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 76/252 (30%), Gaps = 27/252 (10%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAV--- 72 + ++E+++NS+D A ++ VE I G + D+G+G+ + P Sbjct: 49 VNGLHTMVREVVDNSVDEVMAGRATTVEVTIHEDG--SVTVADDGYGIPTGPHPKLGVST 106 Query: 73 ------QRHCTSKISDDFSNIHTFGFRGEALPSIGAVS---HLTLMSRPPQNNTGAQIAI 123 H K + + + G G + ++ A+S + + G Sbjct: 107 LQVVMTVLHAGGKFDNKSYKVSS-GLHGVGVSAVNALSAYMRVDV----HNARDGMHYYQ 161 Query: 124 SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 V T F +++ + R MA + Sbjct: 162 EYRCGVPQCEVQKVGPTTRRGTITRF--LPDTTIIQTLDYNFKTLAQRFREMAYLNKGLR 219 Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFN 243 F F + + ++NF G + + + + + + + + Sbjct: 220 FKF-VDERDGNEINFYFEGG-IRSYVRHLNKDKNVLHKHPFYVERTIDEVMVEVALQYTE 277 Query: 244 RGNANQFYVFIN 255 + + Y F N Sbjct: 278 SFDTDSVYAFAN 289 >gi|291279230|ref|YP_003496065.1| two-component sensor histidine kinase [Deferribacter desulfuricans SSM1] gi|290753932|dbj|BAI80309.1| two-component sensor histidine kinase [Deferribacter desulfuricans SSM1] Length = 371 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Query: 30 LIENSLDA-ESS-RVETVIAGGGK-SFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI N++DA +++ + K + DNG G+ E I TSK Sbjct: 278 LIHNAIDAVDANGEIRIYCKQEEKFDVIVVEDNGCGIDEEFIKKIFIPFHTSK 330 >gi|238897993|ref|YP_002923673.1| DNA topoisomerase IV, subunit B [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465751|gb|ACQ67525.1| DNA topoisomerase IV, subunit B [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 632 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 72/218 (33%), Gaps = 23/218 (10%) Query: 21 ERPSIAIKELIENSLD-A---ESSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A ++ R++ + +++DNG GM EE I Sbjct: 31 TRPNHLAQEVIDNSVDEALEGKARRIDVTVYPD--HSLKVSDNGRGMPVDLHPEEQVPAI 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + + G G L + A+S L + + + Sbjct: 89 ELILSRLHAGGKFSNKNYH-FSGGLHGVGLSVVNALSLRLEVTVKRGGQIYRIAFEKGNK 147 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 + +F + + ++ +++ A+ P + F Sbjct: 148 TEDLEIIGTCAQRDTGTCVHFW----PDASFFDTPHFSISRLSHLLKAKAVLCPSLQIVF 203 Query: 187 STIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL 224 +N + + + +G Sbjct: 204 KNELNNTEQ--RWCYEDGLKHYLIETLGASVTLPKFPF 239 >gi|77462680|ref|YP_352184.1| sensor histidine kinase [Rhodobacter sphaeroides 2.4.1] gi|77387098|gb|ABA78283.1| Sensor Histidine kinase [Rhodobacter sphaeroides 2.4.1] Length = 587 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Query: 22 RPSIAIKELIENSLDAE----SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 R I L+ N+LDA S +++ V+A G + + DNG G+ E++ + T Sbjct: 477 RLEQVIINLLRNALDATKIVPSPQIDLVLAAGETATLTVRDNGHGI--EDLDNLFEPFYT 534 Query: 78 SK 79 +K Sbjct: 535 TK 536 >gi|332799756|ref|YP_004461255.1| integral membrane sensor signal transduction histidine kinase [Tepidanaerobacter sp. Re1] gi|332697491|gb|AEE91948.1| integral membrane sensor signal transduction histidine kinase [Tepidanaerobacter sp. Re1] Length = 345 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 5/62 (8%) Query: 31 IENSLD---AESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSN 86 ++N+LD A S ++ I DNG G+ E+I +R S+ S D Sbjct: 246 VKNALDHTNAGS-QITVEWKKLPAVIQITIKDNGSGIHPEDIHHIFKRFYRSRFSKDTQG 304 Query: 87 IH 88 I Sbjct: 305 IG 306 >gi|295675339|ref|YP_003603863.1| histidine kinase [Burkholderia sp. CCGE1002] gi|295435182|gb|ADG14352.1| histidine kinase [Burkholderia sp. CCGE1002] Length = 698 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAESS----RVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + R+ + G + + DNG G+ + +P + Sbjct: 578 RLEQVLINLLGNALDATAGMNPPRITVEVEAGAANLSIAVGDNGPGIPDDVLPHLFEPFF 637 Query: 77 TSK 79 T+K Sbjct: 638 TTK 640 >gi|255263320|ref|ZP_05342662.1| C4-dicarboxylate transport sensor protein DctB [Thalassiobium sp. R2A62] gi|255105655|gb|EET48329.1| C4-dicarboxylate transport sensor protein DctB [Thalassiobium sp. R2A62] Length = 589 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 10/64 (15%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R I L+ N+LDA ++ ++ ++A G + + DNG G+ +++ + Sbjct: 475 RLEQVIINLLRNALDA--TKGLEDPKIDIILAAGETATLTVRDNGQGI--DDLDNLFEPF 530 Query: 76 CTSK 79 T+K Sbjct: 531 YTTK 534 >gi|325978699|ref|YP_004288415.1| DNA gyrase subunit B [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178627|emb|CBZ48671.1| DNA gyrase subunit B [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 620 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ +E I + D+G G+ + Sbjct: 21 EIVDNSIDEALAGFATHIEVFIEKD--DSITVVDDGRGIPVD 60 >gi|288905669|ref|YP_003430891.1| DNA gyrase subunit B [Streptococcus gallolyticus UCN34] gi|288732395|emb|CBI13967.1| DNA gyrase subunit B [Streptococcus gallolyticus UCN34] Length = 650 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ +E I + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFATHIEVFIEKD--DSITVVDDGRGIPVD 90 >gi|306833889|ref|ZP_07467013.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus bovis ATCC 700338] gi|304423890|gb|EFM27032.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus bovis ATCC 700338] Length = 650 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ +E I + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFATHIEVFIEKD--DSITVVDDGRGIPVD 90 >gi|193076403|gb|ABO11072.2| DNA mismatch repair enzyme [Acinetobacter baumannii ATCC 17978] Length = 704 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQ--ITDNGFGMTS 65 AI ELI NS+DA ++++ + K Q I D+G G T Sbjct: 29 AIVELIMNSIDANATQINIKLWLNAKKHLQFEIIDDGKGFTK 70 >gi|268563859|ref|XP_002647030.1| C. briggsae CBR-MORC-1 protein [Caenorhabditis briggsae] gi|187036440|emb|CAP24421.1| CBR-MORC-1 protein [Caenorhabditis briggsae AF16] Length = 870 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 25 IAIKELIENSLDAESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQ 73 AI EL++NS DA +++V + + +I DNG G++ +E+ ++ Sbjct: 53 TAIAELVDNSYDANATKVLISLENKFPNNQIRICDNGTGLSRQEVLNIIK 102 >gi|330834338|ref|YP_004409066.1| DNA topoisomerase VI subunit B [Metallosphaera cuprina Ar-4] gi|329566477|gb|AEB94582.1| DNA topoisomerase VI subunit B [Metallosphaera cuprina Ar-4] Length = 531 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 14/68 (20%) Query: 24 SIAIKELIENSLDAESS-------RVETVIAGGGKS----FFQITDNGFGMTSEEIPMAV 72 A++EL+EN+LDA + ++ ++ + + DNG G+ +P A Sbjct: 33 YQALRELVENALDA--TDIHQILPSIKIIVERTSQEKEIYRLSVEDNGIGIPPHVVPDAF 90 Query: 73 QR-HCTSK 79 R +SK Sbjct: 91 GRVLYSSK 98 >gi|167751360|ref|ZP_02423487.1| hypothetical protein EUBSIR_02346 [Eubacterium siraeum DSM 15702] gi|167655606|gb|EDR99735.1| hypothetical protein EUBSIR_02346 [Eubacterium siraeum DSM 15702] Length = 635 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 + ELI N+ DAE+ V I ++ D+G GM + + Sbjct: 34 VLAELIANAYDAEAENVYIFIDE---QEIRVEDDGNGMDPDSLD 74 >gi|139439626|ref|ZP_01773039.1| Hypothetical protein COLAER_02066 [Collinsella aerofaciens ATCC 25986] gi|133774967|gb|EBA38787.1| Hypothetical protein COLAER_02066 [Collinsella aerofaciens ATCC 25986] Length = 361 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 7/85 (8%) Query: 20 IERPSIAIKELIENSLDAESSRVET-VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 I+ + E++ N+ DA + +V G DNG G+ + TS Sbjct: 47 IQHVEDIVIEMLRNARDAGADKVYLATTKEDGVRTLVFLDNGSGVPQDMQERIFDARVTS 106 Query: 79 KISD---DFSNIHTFGFRGEALPSI 100 K+ D +H G RG AL SI Sbjct: 107 KLESMKMDRWGVH--G-RGMALFSI 128 >gi|293400051|ref|ZP_06644197.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306451|gb|EFE47694.1| DNA gyrase, B subunit [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 648 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ ++ I ++ DNG GM Sbjct: 57 EIVDNSIDEALAGFATDIDIAIEKDNI--IRVEDNGRGMP 94 >gi|291278720|ref|YP_003495555.1| two-component sensor histidine kinase [Deferribacter desulfuricans SSM1] gi|290753422|dbj|BAI79799.1| two-component sensor histidine kinase [Deferribacter desulfuricans SSM1] Length = 431 Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Query: 30 LIENSL---DAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LIEN+L D E+ ++E S I DNG G++ E++P +R SK Sbjct: 338 LIENALKAVDKENGKIEIFAYDENNMSKIIIKDNGCGISDEDLPYIFERFF-SK 390 >gi|106734167|gb|ABF82560.1| DNA topoisomerase IV subunit beta [uncultured bacterium] Length = 47 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A ++ I G + + DNG G+ + Sbjct: 3 VREIVDNSIDEALAGYCDTIKVTIESG--NSILVEDNGRGIPVD 44 >gi|330959492|gb|EGH59752.1| hypothetical protein PMA4326_13154 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 588 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGM-TSEEIPMAVQ 73 A+ EL+ NS+DA ++RV+ G F + D+G G +EI M + Sbjct: 30 AVVELVMNSIDAGATRVDLNFKEDGT--FTVKDSGRGFADRKEIEMFFE 76 >gi|294776806|ref|ZP_06742269.1| conserved hypothetical protein [Bacteroides vulgatus PC510] gi|294449282|gb|EFG17819.1| conserved hypothetical protein [Bacteroides vulgatus PC510] Length = 862 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 EL++NS DA +++VE I DNG GM+ ++ Sbjct: 30 ELVKNSYDAYATKVEITFCN---DKIIIADNGKGMSFNDLK 67 >gi|291543406|emb|CBL16515.1| DNA gyrase subunit B [Ruminococcus sp. 18P13] Length = 649 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + ++ I G ++TDNG G+ Sbjct: 48 VYEIVDNSIDEALAGYCTHIQVEILPG--DIIRVTDNGRGIP 87 >gi|32490765|ref|NP_871019.1| hypothetical protein WGLp016 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25165971|dbj|BAC24162.1| gyrB [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 803 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 82/242 (33%), Gaps = 25/242 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A ++ I + D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGFCKKIIVTIHED--KSISVEDDGRGIPVDIHEEEGISAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K +D + + G G + + A+S L L + Q G ++ + Sbjct: 100 AGGKFDNDSYKV-SGGLHGVGISVVNALSEKLEL-TIYRNGKEYNQNYNFGSPCFPLKKI 157 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 + T ++R P F K+ + + ++ + ++ +S IK+N+ Sbjct: 158 GKSRKTGTKIRF----WPNLSIFKKNIEFQYEILFKRLMELSFLNSNISIYLIDIKNNKN 213 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 K + +N ++ ++I ++ +N G F Sbjct: 214 KHFHYEGGIKEFVKYLHKNKNPIHSNMFYFIKEKDKILVEIAL---QWNDGFKENINCFT 270 Query: 255 NG 256 N Sbjct: 271 NN 272 >gi|332983368|ref|YP_004464809.1| integral membrane sensor signal transduction histidine kinase [Mahella australiensis 50-1 BON] gi|332701046|gb|AEE97987.1| integral membrane sensor signal transduction histidine kinase [Mahella australiensis 50-1 BON] Length = 535 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 9/54 (16%) Query: 30 LIENSL-----DAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 L++N+L D S++ + GK FQ++DNG G+ EE+P R T Sbjct: 425 LLDNALKYTLPD---SKINVSVKKEDGKVMFQVSDNGPGIPEEELPFIFNRFYT 475 >gi|170728515|ref|YP_001762541.1| DNA topoisomerase IV subunit B [Shewanella woodyi ATCC 51908] gi|169813862|gb|ACA88446.1| DNA topoisomerase IV, B subunit [Shewanella woodyi ATCC 51908] Length = 631 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 72/184 (39%), Gaps = 25/184 (13%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A +++++ ++ + ++ D+G GM EE + Sbjct: 33 TRPNHLGQEVIDNSVDEALAGHATKIDVILHKD--NSLEVIDDGRGMPIDIHPEEGIPGV 90 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQ--NNTGAQIAIS 124 + + + H K S+D + G G + + A+S + + R + + Sbjct: 91 ELILTKLHAGGKFSNDNYQ-FSGGLHGVGISVVNALSNRVEITVRRNGLVYDMAFEH-GD 148 Query: 125 GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF 184 + + T V F+ P+ + S +T ++R A+ P + Sbjct: 149 KVEDLTETGTCGRRNTGTRVH--FWPTPS---YFDSANFSIPKLTYLLRAKAVLCPGLKI 203 Query: 185 TFST 188 F Sbjct: 204 KFVN 207 >gi|225619544|ref|YP_002720801.1| D Gyrase B subunit [Brachyspira hyodysenteriae WA1] gi|10644698|gb|AAG21374.1|AF288224_1 DNA Gyrase B subunit [Brachyspira hyodysenteriae] gi|225214363|gb|ACN83097.1| D Gyrase B subunit [Brachyspira hyodysenteriae WA1] Length = 636 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 66/220 (30%), Gaps = 37/220 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA---------VQ 73 + E+++NS+D A + I G Q+ D+G G+ + P + Sbjct: 41 VYEVVDNSIDEAMAGYCKNITVTIKKGNI--IQVEDDGRGIPVDMHPKLKISALEVVMTK 98 Query: 74 RHCTSKISDDFSNIHTFGFRG------EALPS--IGAVSHLTLMSRPPQNNTGAQIAISG 125 H K ++ + + G G AL + I V Q+ G Sbjct: 99 LHAGGKFDNETYKV-SGGLHGVGVSVVNALSTELIAEV--------NKDGKLYRQVYHRG 149 Query: 126 EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFT 185 V+ V + T V A ++ + ++ + +R +A + T Sbjct: 150 IPEEPVKEVGTSKKTGTTVT-----FKADDEIFETTVYDYKILANRLRELAFLNRGIRIT 204 Query: 186 FSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELN 225 + N G I+ + + + Sbjct: 205 LKDEREAEVVSNEFYYEGGIEMFITHLNENKKALHDKPIY 244 >gi|25395740|pir||H88451 protein ZC155.3 [imported] - Caenorhabditis elegans Length = 1210 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Query: 23 PSIAIKELIENSLDAESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 P AI EL++N+ DA++ + + F ++ D+G GM EE A+ ++K S Sbjct: 398 PLSAIAELVDNAYDADARDLHIDFLDINNEQFLELRDDGLGMAREEALHAITFGHSAKCS 457 Query: 82 DDFSNIHTFG 91 I +G Sbjct: 458 ---YKIGRYG 464 >gi|326384015|ref|ZP_08205698.1| ATP-binding region ATPase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326197175|gb|EGD54366.1| ATP-binding region ATPase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length = 474 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 9/61 (14%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRH 75 R + ++ L+ N++ DA ++ + + D+G GMT+E+ +R Sbjct: 350 RLTQVVRNLVGNAVAHAGPDA---HIQVSVESAPTEVRVTVADDGPGMTAEDAEHVFERF 406 Query: 76 C 76 Sbjct: 407 Y 407 >gi|24375387|ref|NP_719430.1| DNA topoisomerase IV subunit B [Shewanella oneidensis MR-1] gi|24350217|gb|AAN56874.1|AE015822_6 DNA topoisomerase IV, B subunit [Shewanella oneidensis MR-1] Length = 628 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 84/215 (39%), Gaps = 29/215 (13%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A ++++E V+ + ++TD+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHATKIEVVLHTD--NSLEVTDDGRGMPVDIHPEEGIPGV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAIS 124 + + + H K S+ + G G + + A+S + + R + + Sbjct: 88 ELILTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSRRVEVTVRRDGQVYDIAFENGFK 146 Query: 125 GEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 E++ N GT V ++ S + + ++R A+ P + Sbjct: 147 VEELKVTGTCGRRNTGTRVHFW-------PDTSYFDSPNFSNSKLIYLLRAKAVLCPGLR 199 Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFI 218 F+ + +++ + + +G++ + Sbjct: 200 IKFTN--KHTNEVHEWYYESGLTDYLKAAVGDNIM 232 >gi|257388768|ref|YP_003178541.1| DNA topoisomerase VI subunit B [Halomicrobium mukohataei DSM 12286] gi|257171075|gb|ACV48834.1| DNA topoisomerase VI, B subunit [Halomicrobium mukohataei DSM 12286] Length = 807 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 8/57 (14%) Query: 23 PSIAIKELIENSLD----AESS-RVETVIAGGG--KSFFQITDNGFGMTSEEIPMAV 72 A+KE ++N+LD A + + I G + DNG G+T E+IP Sbjct: 47 LVTAVKEAVDNALDACEEAGITPDIYVEIQEAGDYYRLI-VEDNGPGITREQIPNIF 102 >gi|153822537|ref|ZP_01975204.1| putative DNA mismatch repair protein [Vibrio cholerae B33] gi|229509249|ref|ZP_04398734.1| hypothetical protein VCE_000649 [Vibrio cholerae B33] gi|229608829|ref|YP_002879477.1| hypothetical protein VCD_003751 [Vibrio cholerae MJ-1236] gi|255744124|ref|ZP_05418077.1| putative DNA mismatch repair protein [Vibrio cholera CIRS 101] gi|126519955|gb|EAZ77178.1| putative DNA mismatch repair protein [Vibrio cholerae B33] gi|229353821|gb|EEO18757.1| hypothetical protein VCE_000649 [Vibrio cholerae B33] gi|229371484|gb|ACQ61907.1| hypothetical protein VCD_003751 [Vibrio cholerae MJ-1236] gi|255738064|gb|EET93456.1| putative DNA mismatch repair protein [Vibrio cholera CIRS 101] gi|259156238|gb|ACV96185.1| putative DNA mismatch repair protein [Vibrio cholerae Ban5] gi|259156428|gb|ACV96373.1| putative DNA mismatch repair protein [Vibrio cholerae Ind5] Length = 672 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Query: 33 NSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIP 69 N LDA +S ++ +I GG +I DNG G+ + Sbjct: 35 NGLDAGASDIDVIINTCDLGGVESIEIHDNGEGIDFHNLD 74 >gi|15921560|ref|NP_377229.1| DNA topoisomerase VI subunit B [Sulfolobus tokodaii str. 7] gi|28380202|sp|Q971T2|TOP6B_SULTO RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|15622346|dbj|BAB66338.1| 532aa long hypothetical type II DNA topoisomerase VI subunit B [Sulfolobus tokodaii str. 7] Length = 532 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 67/196 (34%), Gaps = 34/196 (17%) Query: 22 RPSIA----IKELIENSLDAE-------SSRVETVIAGGGKS--FFQITDNGFGMTSEEI 68 P+ A ++EL+EN+LDA S ++ + K + DNG G+ + Sbjct: 26 NPARALYQTVRELVENALDATDVHNILPSIKIIIELVDPQKQIYKVNVEDNGIGIPPHIV 85 Query: 69 PMAVQR-HCTSKISDDFSNIH-TFGFRGEALPSIGAV--SH------LTLMSRPPQNNTG 118 P A + +SK +G L AV S + +++ P + Sbjct: 86 PNAFGKVLYSSKYV--LRQTRGMYG-----LGVKAAVLYSQMYQERPVEVVTSPINSK-- 136 Query: 119 AQIAISGEKISSVRPVAMN-PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 +I KI V+ + T V + L Q I + +++ I Sbjct: 137 -RIYFFKLKIDVVKNEPIILQKTSVVNEKNWHGTSVTLYLYADWQRAKQKIYEYVKKTYI 195 Query: 178 AYPKVSFTFSTIKSNR 193 P F F +N Sbjct: 196 ISPYAEFFFKDPDNNV 211 >gi|311896966|dbj|BAJ29374.1| hypothetical protein KSE_35690 [Kitasatospora setae KM-6054] Length = 490 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 22 RPSIAIKELIENSLDAESSRVETVIAGGGK-SFFQITDNGFGMTSEEIPMA 71 A+ +L++NS+ AE+ ++ G ++ + D+G GM+ ++ A Sbjct: 23 SLPAAVADLVDNSISAEAVEIDVDFTWAGSETWISVADDGTGMSPAKLATA 73 >gi|289628211|ref|ZP_06461165.1| DNA gyrase subunit B [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649101|ref|ZP_06480444.1| DNA gyrase subunit B [Pseudomonas syringae pv. aesculi str. 2250] gi|330870078|gb|EGH04787.1| DNA gyrase subunit B [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 805 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 78/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q + G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ + K+ +++ IR ++ V +S + + Sbjct: 161 ESDTTGTQIH-----FKPSADTFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNQVFHFNIQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|114046852|ref|YP_737402.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella sp. MR-7] gi|113888294|gb|ABI42345.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella sp. MR-7] Length = 360 Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 S A+ L+ NSL+A +++++ V G+ + DNG G+ ++ ++ T+K Sbjct: 249 LSSAVNNLVMNSLEAGATQIQIVANDVGEQLALNVVDNGKGLDAKMQQKVLEPFFTTK 306 >gi|325272721|ref|ZP_08139074.1| hypothetical protein G1E_07233 [Pseudomonas sp. TJI-51] gi|324102167|gb|EGB99660.1| hypothetical protein G1E_07233 [Pseudomonas sp. TJI-51] Length = 812 Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 11/76 (14%) Query: 6 LSEKIINQI---AAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 L +II+ I AG A+ ELI NS+DA+++ V + G D+G G Sbjct: 7 LDPQIIHHIIYSQAG----SIGKAVIELIMNSVDAKATTVRLTMTKAGFDCV---DDGTG 59 Query: 63 M-TSEEIPMAVQRHCT 77 + E++ R T Sbjct: 60 FASREDVVRYFGRFGT 75 >gi|254453386|ref|ZP_05066823.1| periplasmic sensor signal transduction histidine kinase [Octadecabacter antarcticus 238] gi|198267792|gb|EDY92062.1| periplasmic sensor signal transduction histidine kinase [Octadecabacter antarcticus 238] Length = 567 Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 16/84 (19%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R I L+ N+LDA ++ VE ++ G + + DNG G+ E++ + Sbjct: 453 RLEQVIINLLRNALDA--TKMALEPSVEILLVQGDVARLSVRDNGSGI--EDLDELFEPF 508 Query: 76 CTSKISDDFSNIHTFGFRGEALPS 99 T+K + D + + G A+ S Sbjct: 509 YTTKQAGDGTGL------GLAISS 526 >gi|18313187|ref|NP_559854.1| DNA topoisomerase VI subunit B [Pyrobaculum aerophilum str. IM2] gi|28380201|sp|Q8ZVM0|TOP6B_PYRAE RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|18160701|gb|AAL64036.1| DNA topoisomerase VI (type II ) subunit b [Pyrobaculum aerophilum str. IM2] Length = 527 Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 10/65 (15%) Query: 27 IKELIENSLDAESS-----RV--ETVIAGGGKSFFQI--TDNGFGMTSEEIPMAVQR-HC 76 I+EL ENSLDA + + I K + + DNG G+ EIP R Sbjct: 33 IRELTENSLDATETYGILPTIYLRVNIEDEQKGWVSVYAEDNGIGIPGNEIPNVFGRVFY 92 Query: 77 TSKIS 81 +SK Sbjct: 93 SSKYK 97 >gi|126175131|ref|YP_001051280.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella baltica OS155] gi|125998336|gb|ABN62411.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella baltica OS155] Length = 360 Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 23 PSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 S AI L+ NS++A ++ + G + + DNG G+ + ++ T+K Sbjct: 249 LSSAINNLVMNSIEAGATEIRIQAAEEGDQLLLNVIDNGKGLDANMQQKVLEPFFTTK 306 >gi|54294650|ref|YP_127065.1| hypothetical protein lpl1727 [Legionella pneumophila str. Lens] gi|53754482|emb|CAH15966.1| hypothetical protein lpl1727 [Legionella pneumophila str. Lens] Length = 343 Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 21 ERPSIAIKELIENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E AI LI N+L +E+++++ + G + DNG GM+ E A T Sbjct: 237 ESLIGAILNLIINALQSEATQIDLTLASMDDSGIQ-ISVEDNGNGMSEEVRAQAFSPFYT 295 Query: 78 SK 79 +K Sbjct: 296 TK 297 >gi|84497090|ref|ZP_00995912.1| hypothetical protein JNB_12888 [Janibacter sp. HTCC2649] gi|84381978|gb|EAP97860.1| hypothetical protein JNB_12888 [Janibacter sp. HTCC2649] Length = 571 Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVI--AGGGKSFFQITDNGF 61 L + ++N + IE ++E + NS+DA++ ++ + G I D+G Sbjct: 12 HLLRQAVLN---TSQSIE----LLREAVSNSVDADARNIDIKLTNDNGEIWNIVIQDDGN 64 Query: 62 GMT 64 GM Sbjct: 65 GME 67 >gi|314935205|ref|ZP_07842558.1| DNA gyrase, B subunit [Staphylococcus hominis subsp. hominis C80] gi|313656540|gb|EFS20279.1| DNA gyrase, B subunit [Staphylococcus hominis subsp. hominis C80] Length = 644 Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYANQIEVVIEND--NWIKVTDNGRGIPVD 89 >gi|284989335|ref|YP_003407889.1| histidine kinase [Geodermatophilus obscurus DSM 43160] gi|284062580|gb|ADB73518.1| histidine kinase [Geodermatophilus obscurus DSM 43160] Length = 722 Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 3/44 (6%) Query: 26 AIKELIENSLDAESSRVETVIAGG---GKSFFQITDNGFGMTSE 66 A+ EL++N+ DA++ RV + G G Q+ D+G GMT++ Sbjct: 32 AVMELVKNAYDADADRVVVRLIGPLREGTGCLQVLDDGHGMTAD 75 >gi|228474176|ref|ZP_04058913.1| DNA gyrase, B subunit [Staphylococcus hominis SK119] gi|228271871|gb|EEK13208.1| DNA gyrase, B subunit [Staphylococcus hominis SK119] Length = 640 Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 46 EIVDNSIDEALAGYANQIEVVIEND--NWIKVTDNGRGIPVD 85 >gi|108757769|ref|YP_631789.1| ATPase [Myxococcus xanthus DK 1622] gi|108461649|gb|ABF86834.1| ATPase [Myxococcus xanthus DK 1622] Length = 528 Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 5/96 (5%) Query: 30 LIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIH 88 LI+NS+ A + V GG+ + D+G GM+ E+ A++ S + + + Sbjct: 59 LIDNSITAGARNVWLTFHWGGEDSHITLRDDGRGMSEAELADAMRPGNRSPLDE--RAPN 116 Query: 89 TFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIA 122 G G L S LT+ + + Sbjct: 117 DLGRFGLGLKTASFSQARRLTVATLKAGGRWAIRRW 152 >gi|162454803|ref|YP_001617170.1| posible heat shock protein [Sorangium cellulosum 'So ce 56'] gi|161165385|emb|CAN96690.1| posible heat shock protein [Sorangium cellulosum 'So ce 56'] Length = 757 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 5/45 (11%) Query: 27 IKELIENSLDA---ESSRVETVIAGGGKSFFQITDNGFGMTSEEI 68 ++EL++N+LDA + R++ + G+ +TD G GM+ E+ Sbjct: 68 LRELLQNALDASPPGA-RIDVRSSEDGRE-ISVTDQGRGMSRTEL 110 >gi|67920055|ref|ZP_00513575.1| DNA gyrase, B subunit [Crocosphaera watsonii WH 8501] gi|67857539|gb|EAM52778.1| DNA gyrase, B subunit [Crocosphaera watsonii WH 8501] Length = 642 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TDNG G+ ++ Sbjct: 41 VYEVVDNSIDEALAGYCTHIEIDINADG--SITVTDNGRGIPTD 82 >gi|148359307|ref|YP_001250514.1| sensor kinase HydH [Legionella pneumophila str. Corby] gi|296107354|ref|YP_003619054.1| sensor kinase HydH [Legionella pneumophila 2300/99 Alcoy] gi|148281080|gb|ABQ55168.1| sensor kinase HydH [Legionella pneumophila str. Corby] gi|295649255|gb|ADG25102.1| sensor kinase HydH [Legionella pneumophila 2300/99 Alcoy] gi|307610462|emb|CBX00033.1| hypothetical protein LPW_17891 [Legionella pneumophila 130b] Length = 340 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 21 ERPSIAIKELIENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E AI LI N+L +E+++++ + G + DNG GM+ E A T Sbjct: 234 ESLIGAILNLIINALQSEATQIDLTLASMDDSGIQ-ISVEDNGNGMSEEVRAQAFSPFYT 292 Query: 78 SK 79 +K Sbjct: 293 TK 294 >gi|329767180|ref|ZP_08258707.1| DNA gyrase subunit B [Gemella haemolysans M341] gi|328836847|gb|EGF86494.1| DNA gyrase subunit B [Gemella haemolysans M341] Length = 638 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + I G ++ ++ DNG G+ + Sbjct: 46 EIVDNSIDEALAGYCDTITVAIEKG--NWIRVEDNGRGIPVD 85 >gi|193216448|ref|YP_001999690.1| topoiosmerase IV subunit B [Mycoplasma arthritidis 158L3-1] gi|193001771|gb|ACF06986.1| topoiosmerase IV subunit B [Mycoplasma arthritidis 158L3-1] Length = 637 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 81/250 (32%), Gaps = 26/250 (10%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT-------SEEI 68 I + E+++N+LD A ++ ++ + + DNG G+ + Sbjct: 31 ITGLHHLVWEIVDNALDEALAGFATDIKVTLKKD--DSVIVEDNGRGIPVSKHGSGKTGV 88 Query: 69 PMAV-QRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEK 127 + + H K + + G G + A+S L+ + ++ + +K Sbjct: 89 ELVFTELHAGGKFDEGVYK-TSGGLHGVGSSVVNALSE-KLIVKVYRDKKEYKTVFEQDK 146 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFS 187 I V + K + ++++ + +R + P + F+ Sbjct: 147 IIEGTNVVGPTTKHGTKVQFW----PDKTIFKKTKFSSDIVKEKLREASFLIPNLKIHFN 202 Query: 188 TIKSNRYKMNFQSTNGNFPERISQVI-GEDFINNAVELNEKSNEITLQGYTGIPTFNRGN 246 +S E I V G++FI++ +I ++ + Sbjct: 203 HEESGEA--ITFEAAEGIKEYIKFVGEGKNFISSIFYAKGTFKKIEMEIAL---VYTDNY 257 Query: 247 ANQFYVFING 256 Y F+N Sbjct: 258 TENIYSFVNN 267 >gi|4099111|gb|AAD00550.1| topoisomerase II ParE [Mycoplasma arthritidis] Length = 614 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 81/250 (32%), Gaps = 26/250 (10%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT-------SEEI 68 I + E+++N+LD A ++ ++ + + DNG G+ + Sbjct: 8 ITGLHHLVWEIVDNALDEALAGFATDIKVTLKKD--DSVIVEDNGRGIPVSKHGSGKTGV 65 Query: 69 PMAV-QRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEK 127 + + H K + + G G + A+S L+ + ++ + +K Sbjct: 66 ELVFTELHAGGKFDEGVYK-TSGGLHGVGSSVVNALSE-KLIVKVYRDKKEYKTVFEQDK 123 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFS 187 I V + K + ++++ + +R + P + F+ Sbjct: 124 IIEGTNVVGPTTKHGTKVQFW----PDKTIFKKTKFSSDIVKEKLREASFLIPNLKIHFN 179 Query: 188 TIKSNRYKMNFQSTNGNFPERISQVI-GEDFINNAVELNEKSNEITLQGYTGIPTFNRGN 246 +S E I V G++FI++ +I ++ + Sbjct: 180 HEESGEA--ITFEAAEGIKEYIKFVGEGKNFISSIFYAKGTFKKIEMEIAL---VYTDNY 234 Query: 247 ANQFYVFING 256 Y F+N Sbjct: 235 TENIYSFVNN 244 >gi|24940620|gb|AAN65247.1|AF329398_37 clorobiocin-resistant gyrase B [Streptomyces roseochromogenes subsp. oscitans] Length = 572 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++EL++NS+D A + R++ I A GG ++ DNG G+ Sbjct: 60 VQELVDNSVDEALAGVADRIDVTILADGG---VRVVDNGRGIP 99 >gi|28627816|gb|AAN75468.1| DNA gyrase subunit B [Streptomyces roseochromogenes subsp. oscitans] Length = 677 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++EL++NS+D A + R++ I A GG ++ DNG G+ Sbjct: 60 VQELVDNSVDEALAGVADRIDVTILADGG---VRVVDNGRGIP 99 >gi|224477952|ref|YP_002635558.1| DNA gyrase subunit B [Staphylococcus carnosus subsp. carnosus TM300] gi|222422559|emb|CAL29373.1| DNA gyrase subunit B [Staphylococcus carnosus subsp. carnosus TM300] Length = 640 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 26/42 (61%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + ++E +I ++ ++TDNG G+ + Sbjct: 46 EIVDNSIDEALAGYADKIEVIIEKD--NWIRVTDNGRGIPVD 85 >gi|328554791|gb|AEB25283.1| two-component sensor histidine kinase [Bacillus amyloliquefaciens TA208] Length = 427 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 30 LIENSLDAESS---RVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+NS++A S R+E + QITDNG GM+ +E+ + + T K Sbjct: 331 LIKNSIEAVPSENGRIEVSVQKQEQMILIQITDNGIGMSDDELQKLGKPYYTLK 384 >gi|308174836|ref|YP_003921541.1| two-component sensor histidine kinase [Bacillus amyloliquefaciens DSM 7] gi|307607700|emb|CBI44071.1| two-component sensor histidine kinase [Bacillus amyloliquefaciens DSM 7] gi|328913148|gb|AEB64744.1| two-component sensor histidine kinase [Bacillus amyloliquefaciens LL3] Length = 425 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 30 LIENSLDAESS---RVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+NS++A S R+E + QITDNG GM+ +E+ + + T K Sbjct: 329 LIKNSIEAVPSENGRIEVSVQKQEQMILIQITDNGIGMSDDELQKLGKPYYTLK 382 >gi|312864604|ref|ZP_07724835.1| DNA gyrase, B subunit [Streptococcus downei F0415] gi|311099731|gb|EFQ57944.1| DNA gyrase, B subunit [Streptococcus downei F0415] Length = 650 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E I + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIEVFIEED--DSITVVDDGRGIPVD 90 >gi|145296602|ref|YP_001139423.1| hypothetical protein cgR_2510 [Corynebacterium glutamicum R] gi|140846522|dbj|BAF55521.1| hypothetical protein [Corynebacterium glutamicum R] Length = 485 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 13/78 (16%) Query: 9 KIINQIAAGEIIE----RPSIAIKELIENSL-----DAESSRVETVIAGGGKS-FFQITD 58 + N+ A+ ++E R + L+ N L DA V I G++ + D Sbjct: 360 NVSNKAASIPVVEGDPTRLHQVLTNLVANGLNHGGPDA---EVSIEINTDGQNVKILVAD 416 Query: 59 NGFGMTSEEIPMAVQRHC 76 NG GM+ E+ +R Sbjct: 417 NGVGMSEEDAQHIFERFY 434 >gi|270159559|ref|ZP_06188215.1| sensor histidine kinase FleS [Legionella longbeachae D-4968] gi|289165645|ref|YP_003455783.1| sensor histidine kinase [Legionella longbeachae NSW150] gi|269987898|gb|EEZ94153.1| sensor histidine kinase FleS [Legionella longbeachae D-4968] gi|288858818|emb|CBJ12732.1| putative sensor histidine kinase [Legionella longbeachae NSW150] Length = 333 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 21 ERPSIAIKELIENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E A+ L+ NSL +E++ + + G + DNG GMT E A T Sbjct: 234 ESLLGAVLNLVINSLQSEATEINLTLASTDNSGIQ-ITVEDNGKGMTEEVKNQAFSPFYT 292 Query: 78 SK 79 +K Sbjct: 293 TK 294 >gi|52841990|ref|YP_095789.1| sensor kinase HydH [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629101|gb|AAU27842.1| sensor kinase HydH [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 343 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 21 ERPSIAIKELIENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E AI LI N+L +E+++++ + G + DNG GM+ E A T Sbjct: 237 ESLIGAILNLIINALQSEATQIDLTLASMDDSGIQ-ISVEDNGNGMSEEVRAQAFSPFYT 295 Query: 78 SK 79 +K Sbjct: 296 TK 297 >gi|330812561|ref|YP_004357023.1| incomplete histidine kinase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380669|gb|AEA72019.1| putative incomplete histidine kinase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 424 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 18/78 (23%) Query: 30 LIENS---LDAESSR-----VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 LI N+ LDA ++R + + G+ ++ DNG G++ + + + T Sbjct: 314 LINNAKQALDAGANRPPQIILRLKVVDEGRVRVEVEDNGEGISQDNLARVFEHGFT---- 369 Query: 82 DDFSNIHTFGFRGEALPS 99 + + GF L S Sbjct: 370 ---TRVDGHGF---GLHS 381 >gi|296178610|dbj|BAJ07688.1| DNA gyrase B [Kosmotoga arenicorallina] Length = 538 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 77/244 (31%), Gaps = 26/244 (10%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE---EIPMAVQR----- 74 + E+++NS+D A ++E I G ++ DNG G+ + + + Sbjct: 10 VYEVVDNSIDEVVAGFCDQIEVTIFEDGT--VRVMDNGRGIPVDVHPDTGTSALEVVMTT 67 Query: 75 -HCTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVR 132 H K S D I + G G + + A+S L + E+ V Sbjct: 68 LHAGGKFSKDSYKI-SGGLHGVGVSVVNALSEWLEVKVHREGE----IYRQRYERGIPVT 122 Query: 133 PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSN 192 PV + T + +F + + +++ +R +A P V F Sbjct: 123 PVEIIGKTDKRGTETWFK--PDKLVFTTTDFDFDILESRLRELAFLNPSVRIIF--EDKR 178 Query: 193 RYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYV 252 + G E + + + N + ++ + + Sbjct: 179 INEKRAFHFEGGISEFVKFMNRKKTAINKEPYYIEGTFNDIKVQLAL-QYTTSFEEHILT 237 Query: 253 FING 256 F+N Sbjct: 238 FVNN 241 >gi|261253833|ref|ZP_05946406.1| topoisomerase IV subunit B [Vibrio orientalis CIP 102891] gi|260937224|gb|EEX93213.1| topoisomerase IV subunit B [Vibrio orientalis CIP 102891] Length = 626 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 69/206 (33%), Gaps = 25/206 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE---------- 66 ERP+ +E+I+NS+D A + +++ ++ ++ D+G GM + Sbjct: 30 ERPNHLAQEVIDNSVDEALAGHAKKIKVILHAD--QSLEVIDDGRGMPVDIHPEKGISGV 87 Query: 67 EIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISG 125 E+ + + H K S+D + G G + + A+S + + R Sbjct: 88 EL-IMTKLHAGGKFSNDNYK-FSGGLHGVGISVVNALSKRVEVTVRRGGEIHEIAFEGGN 145 Query: 126 EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFT 185 + + S + + + +R A+ P + T Sbjct: 146 AVTELTVTGTCGHRNTGTAVHFW----PDEKYFDSYKFSALRLVNNLRAKAVLCPGLEIT 201 Query: 186 FSTIKSNRYKMNFQSTNGNFPERISQ 211 FS + + + +S+ Sbjct: 202 FS--DKVNNEEHKWFYEDGLKDYLSE 225 >gi|259047900|ref|ZP_05738301.1| DNA gyrase, B subunit [Granulicatella adiacens ATCC 49175] gi|259035577|gb|EEW36832.1| DNA gyrase, B subunit [Granulicatella adiacens ATCC 49175] Length = 645 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ +E I ++ ++TD+G G+ + Sbjct: 49 EIVDNSIDEALAGFATHIEIEITK--ENHIRVTDDGRGIPVD 88 >gi|125577044|gb|EAZ18266.1| hypothetical protein OsJ_33803 [Oryza sativa Japonica Group] Length = 641 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Query: 23 PSIAIKELIENSLD---AESSRVETVIAGG--GKSFFQITDNGFGMTSEEIPMA 71 P A+ EL++N++D ++R+ G G + D+G GM + + Sbjct: 71 PFGAVAELLDNAVDEIKTGATRIIVDKVNGCNGSPALLVQDDGGGMDPDSLRRC 124 >gi|77550701|gb|ABA93498.1| ATPase, histidine kinase, DNA gyrase B-, and HSP90-like domain containing protein [Oryza sativa Japonica Group] Length = 717 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Query: 23 PSIAIKELIENSLD---AESSRVETVIAGG--GKSFFQITDNGFGMTSEEIPMA 71 P A+ EL++N++D ++R+ G G + D+G GM + + Sbjct: 147 PFGAVAELLDNAVDEIKTGATRIIVDKVNGCNGSPALLVQDDGGGMDPDSLRRC 200 >gi|42567122|ref|NP_194227.2| ATP-binding region, ATPase-like domain-containing protein [Arabidopsis thaliana] gi|332659583|gb|AEE84983.1| histidine kinase-like ATPase domain-containing protein [Arabidopsis thaliana] Length = 707 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 11/71 (15%) Query: 29 ELIENSLD---AESSRVETV-IAG--GGKSFFQITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++N+LD + ++ V+ + GG I DNG GM E++ + + SK+ Sbjct: 185 ELLDNALDEVASGATYVKVDMLENNKGGNRMLLIEDNGGGMDPEKMRQCMSLGYSAKSKL 244 Query: 81 SDDFSNIHTFG 91 ++ I +G Sbjct: 245 AN---TIGQYG 252 >gi|319952610|ref|YP_004163877.1| integral membrane sensor signal transduction histidine kinase [Cellulophaga algicola DSM 14237] gi|319421270|gb|ADV48379.1| integral membrane sensor signal transduction histidine kinase [Cellulophaga algicola DSM 14237] Length = 382 Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Query: 30 LIENSLDA--ESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N +DA + I G + ++D G G+ ++ TSK Sbjct: 287 LVKNGIDAMRGKGSISVEILKEGNNAVILVSDTGHGILKKDFNTIFNPGFTSK 339 >gi|312793478|ref|YP_004026401.1| histidine kinase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312876007|ref|ZP_07735996.1| histidine kinase [Caldicellulosiruptor lactoaceticus 6A] gi|311797205|gb|EFR13545.1| histidine kinase [Caldicellulosiruptor lactoaceticus 6A] gi|312180618|gb|ADQ40788.1| histidine kinase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 185 Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Query: 30 LIENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCT 77 L++NS++A +S V+ IA K I DNG G+ + I T Sbjct: 11 LVQNSIEAGASLVKIEIAEDLKEDLFTITIEDNGRGIPQDVIDKVTDPFYT 61 >gi|220929648|ref|YP_002506557.1| histidine kinase [Clostridium cellulolyticum H10] gi|219999976|gb|ACL76577.1| histidine kinase [Clostridium cellulolyticum H10] Length = 188 Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 3/54 (5%) Query: 31 IENSLDAESSRVETVIA-GGGKS--FFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 ++NS+ A++++++ I+ + ++DNG GM S+ + A TS+I+ Sbjct: 12 VQNSITAQATKIKIHISIDSQRDYLLLNVSDNGAGMDSDLLLKAQDPFFTSRIT 65 >gi|299470955|emb|CBN79939.1| conserved unknown protein [Ectocarpus siliculosus] Length = 562 Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 7/51 (13%) Query: 26 AIKELIENSLDA-----ESSRVETVIAGGGK--SFFQITDNGFGMTSEEIP 69 A+ EL++NS+ A VE + GG+ SF + DNG GM + + Sbjct: 81 AVAELVDNSIQATTDNPGPRTVEIEVELGGRGGSFLVVKDNGRGMNAAGLK 131 >gi|54297676|ref|YP_124045.1| hypothetical protein lpp1727 [Legionella pneumophila str. Paris] gi|53751461|emb|CAH12879.1| hypothetical protein lpp1727 [Legionella pneumophila str. Paris] Length = 343 Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 21 ERPSIAIKELIENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E AI LI N+L +E+++++ + G + DNG GM+ E A T Sbjct: 237 ESLIGAILNLIINALQSEATQIDLTLASMDDSGIQ-ISVEDNGNGMSEEVRAQAFSPFYT 295 Query: 78 SK 79 +K Sbjct: 296 TK 297 >gi|330987022|gb|EGH85125.1| DNA gyrase subunit B [Pseudomonas syringae pv. lachrymans str. M301315] Length = 805 Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 78/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q + G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQKPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ + K+ +++ IR ++ V +S + + Sbjct: 161 ESDTTGTQIH-----FKPSADTFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNEVFHFNIQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|330890246|gb|EGH22907.1| DNA gyrase subunit B [Pseudomonas syringae pv. mori str. 301020] Length = 805 Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 78/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q + G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ + K+ +++ IR ++ V +S + + Sbjct: 161 ESDTTGTQIH-----FKPSADTFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNEVFHFNIQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|325278934|ref|YP_004251476.1| histidine kinase [Odoribacter splanchnicus DSM 20712] gi|324310743|gb|ADY31296.1| histidine kinase [Odoribacter splanchnicus DSM 20712] Length = 189 Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Query: 31 IENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 ++NS+ AE+S ++ I +I DNG GM + TS Sbjct: 12 VQNSIRAEASWIQIRICEDPEADLFLIEIQDNGCGMDEATLARVRDPFFTS 62 >gi|320321691|gb|EFW77790.1| DNA gyrase subunit B [Pseudomonas syringae pv. glycinea str. B076] Length = 807 Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 78/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q + G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ + K+ +++ IR ++ V +S + + Sbjct: 161 ESDTTGTQIH-----FKPSADTFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNEVFHFNIQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|298484612|ref|ZP_07002717.1| DNA gyrase subunit B [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160869|gb|EFI01885.1| DNA gyrase subunit B [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 805 Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 78/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q + G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ + K+ +++ IR ++ V +S + + Sbjct: 161 ESDTTGTQIH-----FKPSADTFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNEVFHFNIQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|257485596|ref|ZP_05639637.1| DNA gyrase subunit B [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 805 Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 78/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q + G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ + K+ +++ IR ++ V +S + + Sbjct: 161 ESDTTGTQIH-----FKPSADTFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNEVFHFNIQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|71735115|ref|YP_272319.1| DNA gyrase subunit B [Pseudomonas syringae pv. phaseolicola 1448A] gi|71555668|gb|AAZ34879.1| DNA gyrase, B subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|320331107|gb|EFW87078.1| DNA gyrase subunit B [Pseudomonas syringae pv. glycinea str. race 4] gi|330881905|gb|EGH16054.1| DNA gyrase subunit B [Pseudomonas syringae pv. glycinea str. race 4] Length = 805 Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 78/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q + G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ + K+ +++ IR ++ V +S + + Sbjct: 161 ESDTTGTQIH-----FKPSADTFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNEVFHFNIQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|268318257|ref|YP_003291976.1| DNA gyrase, B subunit [Rhodothermus marinus DSM 4252] gi|262335791|gb|ACY49588.1| DNA gyrase, B subunit [Rhodothermus marinus DSM 4252] Length = 649 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 14/67 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 + E+++N++D A R+ I G + DNG G+ +E H T K Sbjct: 45 VYEVVDNAIDEAMAGYCDRIAVTINEDG--SITVEDNGRGIPVDE-------HPTEK-RS 94 Query: 83 DFSNIHT 89 + T Sbjct: 95 ALEVVMT 101 >gi|254519261|ref|ZP_05131317.1| multi-sensor signal transduction histidine kinase [Clostridium sp. 7_2_43FAA] gi|226913010|gb|EEH98211.1| multi-sensor signal transduction histidine kinase [Clostridium sp. 7_2_43FAA] Length = 568 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 7/52 (13%) Query: 30 LIENSL----DAESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L+EN++ D + + ++ ++ DNG G+ E++P +R Sbjct: 463 LVENAIKYSND--KTLISIRTYDINDYTYIEVEDNGIGIPKEDLPRIFERFY 512 >gi|225019466|ref|ZP_03708658.1| hypothetical protein CLOSTMETH_03419 [Clostridium methylpentosum DSM 5476] gi|224947795|gb|EEG29004.1| hypothetical protein CLOSTMETH_03419 [Clostridium methylpentosum DSM 5476] Length = 632 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 63/180 (35%), Gaps = 39/180 (21%) Query: 27 IKELIENSLDA--------------ESSR----VETVIAGGGKSFFQITDNGFGMTSEEI 68 ++ELI N+ DA +SR +E + K +TDNG GMT +E+ Sbjct: 29 LRELISNASDALDKLYFRSLTDDSVAASREDLKIELSVDK-EKRTLTVTDNGLGMTKDEL 87 Query: 69 PMAVQRHCTS-----K----ISDDFSNIHTF--GFRGEALPSIGAVS-HLTLMSRPPQNN 116 + S K + +D I F GF S VS +T++SR Sbjct: 88 ENNLGTIAKSGSLNFKKENELKEDVDIIGQFGVGF-----YSAFMVSERVTVISRAFGEK 142 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 + G + ++ P + + E +E I +I++ + Sbjct: 143 EAWKWESEGAEGYTIEPCDKASWGTQIILTIKQNTE---EDNYDEFLEQYRIQSIIKKYS 199 >gi|167647928|ref|YP_001685591.1| integral membrane sensor signal transduction histidine kinase [Caulobacter sp. K31] gi|167350358|gb|ABZ73093.1| integral membrane sensor signal transduction histidine kinase [Caulobacter sp. K31] Length = 526 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Query: 30 LIENSLDAESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTS 78 L+ENS A + V V G+ +++D+G G+ + + TS Sbjct: 434 LVENSRQAGARTVRIVARVVGEEVVLRVSDDGPGVPPADRDRLFEPFFTS 483 >gi|313141108|ref|ZP_07803301.1| DNA gyrase subunit B [Bifidobacterium bifidum NCIMB 41171] gi|313133618|gb|EFR51235.1| DNA gyrase subunit B [Bifidobacterium bifidum NCIMB 41171] Length = 694 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A ++ +E I G ++ D+G G+ +E+P Sbjct: 70 VYEIVDNSVDEALAGYATHIEVTILPDNG---IRVVDDGRGIPVDEVP 114 >gi|302392560|ref|YP_003828380.1| histidine kinase [Acetohalobium arabaticum DSM 5501] gi|302204637|gb|ADL13315.1| histidine kinase [Acetohalobium arabaticum DSM 5501] Length = 185 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Query: 30 LIENSLDAESSRVETVIAG---GGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 L++NS+ AE++ V I K I DNG G++ E + + T Sbjct: 11 LVQNSIKAEATEVRIEIIEDLTADKMKILIIDNGQGISEEFLEDVLDPFTT 61 >gi|224283956|ref|ZP_03647278.1| DNA gyrase subunit B [Bifidobacterium bifidum NCIMB 41171] gi|310286525|ref|YP_003937783.1| gyrB1 DNA gyrase subunit B [Bifidobacterium bifidum S17] gi|311063464|ref|YP_003970189.1| gyrB DNA gyrase subunit B [Bifidobacterium bifidum PRL2010] gi|309250461|gb|ADO52209.1| gyrB1 DNA gyrase subunit B [Bifidobacterium bifidum S17] gi|310865783|gb|ADP35152.1| gyrB DNA gyrase subunit B [Bifidobacterium bifidum PRL2010] Length = 720 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A ++ +E I G ++ D+G G+ +E+P Sbjct: 96 VYEIVDNSVDEALAGYATHIEVTILPDNG---IRVVDDGRGIPVDEVP 140 >gi|183602673|ref|ZP_02964037.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis HN019] gi|219682504|ref|YP_002468887.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis AD011] gi|241190071|ref|YP_002967465.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195477|ref|YP_002969032.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218091|gb|EDT88738.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis HN019] gi|219620154|gb|ACL28311.1| DNA gyrase, B subunit [Bifidobacterium animalis subsp. lactis AD011] gi|240248463|gb|ACS45403.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250031|gb|ACS46970.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177774|gb|ADC85020.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis BB-12] gi|295793058|gb|ADG32593.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis V9] Length = 705 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A ++ +E I G ++ D+G G+ +E+P Sbjct: 80 VYEIVDNSVDEALAGYATHIEVTILPDNG---IRVVDDGRGIPVDEVP 124 >gi|89093821|ref|ZP_01166767.1| C4-dicarboxylate transport sensor protein, putative [Oceanospirillum sp. MED92] gi|89081951|gb|EAR61177.1| C4-dicarboxylate transport sensor protein, putative [Oceanospirillum sp. MED92] Length = 742 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 7/64 (10%) Query: 22 RPSIAIKELIENSLDA--E--SSRVETVIAGGGKSFF--QITDNGFGMTSEEIPMAVQRH 75 R + LI N+L A + V+ + GK+ Q+ D G G+ E++ + Sbjct: 625 RLEQVLVNLISNALQAMEGHPAPAVDVTLEQ-GKTLICLQVRDYGSGIPEEDLGRVFEPF 683 Query: 76 CTSK 79 T+K Sbjct: 684 YTTK 687 >gi|330961508|gb|EGH61768.1| DNA gyrase subunit B [Pseudomonas syringae pv. maculicola str. ES4326] Length = 805 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 78/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q + G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ + K+ +++ IR ++ V +S + + Sbjct: 161 ESDTTGTQIH-----FKPSADTFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNEVFHFNVQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|194099465|ref|YP_002002585.1| hypothetical protein NGK_1960 [Neisseria gonorrhoeae NCCP11945] gi|193934755|gb|ACF30579.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945] Length = 285 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 26/49 (53%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 AI ELI N+ DA ++ VE + + I DNG GM+ +EI R Sbjct: 29 AIAELIANAYDACATEVEVRLFDKPEHKIVIKDNGIGMSFDEINDFYLR 77 >gi|149910059|ref|ZP_01898707.1| hypothetical protein PE36_23697 [Moritella sp. PE36] gi|149806927|gb|EDM66888.1| hypothetical protein PE36_23697 [Moritella sp. PE36] Length = 636 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 10/66 (15%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIA------GGGKSFFQITDNGFGMTSEEIPMA 71 R + LI N++DA S++ ++ G + DNG G+ +E++P Sbjct: 523 RLEQVLVNLISNAIDAVEHHRESQITITVSSTLTSTRLGNIEITVKDNGSGILAEDLPHI 582 Query: 72 VQRHCT 77 T Sbjct: 583 FDPFYT 588 >gi|125534268|gb|EAY80816.1| hypothetical protein OsI_35996 [Oryza sativa Indica Group] Length = 715 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Query: 23 PSIAIKELIENSLD---AESSRVETVIAGG--GKSFFQITDNGFGMTSEEIPMA 71 P A+ EL++N++D ++R+ G G + D+G GM + + Sbjct: 145 PFGAVAELLDNAVDEIKTGATRIIVDKVNGCNGSPALLVQDDGGGMDPDSLRRC 198 >gi|113969622|ref|YP_733415.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella sp. MR-4] gi|113884306|gb|ABI38358.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella sp. MR-4] Length = 360 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 S A+ L+ NSL+A +++++ V G+ + DNG G+ ++ ++ T+K Sbjct: 249 LSSAVNNLVMNSLEAGATQIQIVANDIGEQLALNVVDNGKGLDAKMQQKVLEPFFTTK 306 >gi|167035402|ref|YP_001670633.1| integral membrane sensor signal transduction histidine kinase [Pseudomonas putida GB-1] gi|166861890|gb|ABZ00298.1| integral membrane sensor signal transduction histidine kinase [Pseudomonas putida GB-1] Length = 585 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAES----SRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + R+E I G + D+G G+ ++ Sbjct: 476 RLEQVLINLLRNALDAMADKRYKRLEIRIEPDGELWRLSVLDSGGGIAEADLAKVFDPFF 535 Query: 77 TSK 79 T+K Sbjct: 536 TTK 538 >gi|320547135|ref|ZP_08041431.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus equinus ATCC 9812] gi|320448261|gb|EFW89008.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus equinus ATCC 9812] Length = 650 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ +E I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFATHIEVFIEKD--NSITVVDDGRGIPVD 90 >gi|171780013|ref|ZP_02920917.1| hypothetical protein STRINF_01800 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281361|gb|EDT46796.1| hypothetical protein STRINF_01800 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 650 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ +E I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFATHIEVFIEKD--NSITVVDDGRGIPVD 90 >gi|15790023|ref|NP_279847.1| DNA topoisomerase VI subunit B [Halobacterium sp. NRC-1] gi|169235746|ref|YP_001688946.1| DNA topoisomerase VI subunit B [Halobacterium salinarum R1] gi|13124611|sp|Q9HR31|TOP6B_HALSA RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|229558491|sp|B0R4D3|TOP6B_HALS3 RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|10580449|gb|AAG19327.1| DNA topoisomerase VI subunit B [Halobacterium sp. NRC-1] gi|167726812|emb|CAP13598.1| DNA topoisomerase (ATP-hydrolyzing) VI subunit B [Halobacterium salinarum R1] Length = 804 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 65/190 (34%), Gaps = 39/190 (20%) Query: 23 PSIAIKELIENSLDAESSR-------VETVIAGGGKSF--FQITDNGFGMTSEEIPMAVQ 73 A+KE ++N+LDA + + I+ G+ + + DNG G+T+ +IP Sbjct: 48 LVTAVKEAVDNALDA--TEEAGILPDIYVEISE-GRDYYTLIVEDNGPGITNAQIPKIFG 104 Query: 74 R-------HCTSKISDDFSNIHTFGFRGEALPSIGAV--SHLT------LMSRPPQNNTG 118 + H + G +G + AV S LT + SR + T Sbjct: 105 KLLYGSRFHA---------REQSRGQQGIGIS--AAVLYSQLTSGKPVRIESRTQDSETA 153 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETN-LITDVIRRMAI 177 + + ++ ++ DL T R+ + + D I+ A+ Sbjct: 154 NVYELIIDTDTNEPEISAETEVSAAKSDLRGTHGTRIEMALDANMRARGQLHDYIKHTAV 213 Query: 178 AYPKVSFTFS 187 P Sbjct: 214 VNPHARIELQ 223 >gi|294851320|ref|ZP_06791993.1| sensor protein ChvG [Brucella sp. NVSL 07-0026] gi|294819909|gb|EFG36908.1| sensor protein ChvG [Brucella sp. NVSL 07-0026] Length = 601 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ +AG G + DNG G+ E I +R Sbjct: 485 RLGQVVSNLIENARSFVPDDTG--RIVVTLAGEGNRLRILVEDNGPGIPIENIERIFERF 542 Query: 76 CT 77 T Sbjct: 543 YT 544 >gi|256045696|ref|ZP_05448574.1| Sensor protein chvG [Brucella melitensis bv. 1 str. Rev.1] Length = 589 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ +AG G + DNG G+ E I +R Sbjct: 473 RLGQVVSNLIENARSFVPDDTG--RIVVTLAGEGNRLRILVEDNGPGIPIENIERIFERF 530 Query: 76 CT 77 T Sbjct: 531 YT 532 >gi|254700723|ref|ZP_05162551.1| Sensor protein chvG [Brucella suis bv. 5 str. 513] gi|254707388|ref|ZP_05169216.1| Sensor protein chvG [Brucella pinnipedialis M163/99/10] gi|254709069|ref|ZP_05170880.1| Sensor protein chvG [Brucella pinnipedialis B2/94] gi|254713504|ref|ZP_05175315.1| Sensor protein chvG [Brucella ceti M644/93/1] gi|254716140|ref|ZP_05177951.1| Sensor protein chvG [Brucella ceti M13/05/1] gi|256030594|ref|ZP_05444208.1| Sensor protein chvG [Brucella pinnipedialis M292/94/1] gi|256060056|ref|ZP_05450238.1| Sensor protein chvG [Brucella neotomae 5K33] gi|256158590|ref|ZP_05456480.1| Sensor protein chvG [Brucella ceti M490/95/1] gi|256254001|ref|ZP_05459537.1| Sensor protein chvG [Brucella ceti B1/94] gi|260169500|ref|ZP_05756311.1| Sensor protein chvG [Brucella sp. F5/99] Length = 589 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ +AG G + DNG G+ E I +R Sbjct: 473 RLGQVVSNLIENARSFVPDDTG--RIVVTLAGEGNRLRILVEDNGPGIPIENIERIFERF 530 Query: 76 CT 77 T Sbjct: 531 YT 532 >gi|254694715|ref|ZP_05156543.1| BvrS, sensor histidine kinase [Brucella abortus bv. 3 str. Tulya] gi|254696342|ref|ZP_05158170.1| BvrS, sensor histidine kinase [Brucella abortus bv. 2 str. 86/8/59] gi|254731258|ref|ZP_05189836.1| BvrS, sensor histidine kinase [Brucella abortus bv. 4 str. 292] gi|256258480|ref|ZP_05464016.1| BvrS, sensor histidine kinase [Brucella abortus bv. 9 str. C68] Length = 589 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ +AG G + DNG G+ E I +R Sbjct: 473 RLGQVVSNLIENARSFVPDDTG--RIVVTLAGEGNRLRILVEDNGPGIPIENIERIFERF 530 Query: 76 CT 77 T Sbjct: 531 YT 532 >gi|225626472|ref|ZP_03784511.1| Sensor protein chvG [Brucella ceti str. Cudo] gi|256370489|ref|YP_003108000.1| sensor histidine kinase BvrS, putative [Brucella microti CCM 4915] gi|261217911|ref|ZP_05932192.1| sensory protein BvrS [Brucella ceti M13/05/1] gi|261221141|ref|ZP_05935422.1| sensory protein BvrS [Brucella ceti B1/94] gi|261314874|ref|ZP_05954071.1| sensory protein BvrS [Brucella pinnipedialis M163/99/10] gi|261316568|ref|ZP_05955765.1| sensory protein BvrS [Brucella pinnipedialis B2/94] gi|261321239|ref|ZP_05960436.1| sensory protein BvrS [Brucella ceti M644/93/1] gi|261324032|ref|ZP_05963229.1| sensory protein BvrS [Brucella neotomae 5K33] gi|261751233|ref|ZP_05994942.1| sensory protein BvrS [Brucella suis bv. 5 str. 513] gi|261759026|ref|ZP_06002735.1| sensor histidine kinase [Brucella sp. F5/99] gi|265987641|ref|ZP_06100198.1| sensory protein BvrS [Brucella pinnipedialis M292/94/1] gi|265997101|ref|ZP_06109658.1| sensory protein BvrS [Brucella ceti M490/95/1] gi|225618129|gb|EEH15172.1| Sensor protein chvG [Brucella ceti str. Cudo] gi|256000652|gb|ACU49051.1| sensor histidine kinase BvrS, putative [Brucella microti CCM 4915] gi|260919725|gb|EEX86378.1| sensory protein BvrS [Brucella ceti B1/94] gi|260923000|gb|EEX89568.1| sensory protein BvrS [Brucella ceti M13/05/1] gi|261293929|gb|EEX97425.1| sensory protein BvrS [Brucella ceti M644/93/1] gi|261295791|gb|EEX99287.1| sensory protein BvrS [Brucella pinnipedialis B2/94] gi|261300012|gb|EEY03509.1| sensory protein BvrS [Brucella neotomae 5K33] gi|261303900|gb|EEY07397.1| sensory protein BvrS [Brucella pinnipedialis M163/99/10] gi|261739010|gb|EEY27006.1| sensor histidine kinase [Brucella sp. F5/99] gi|261740986|gb|EEY28912.1| sensory protein BvrS [Brucella suis bv. 5 str. 513] gi|262551569|gb|EEZ07559.1| sensory protein BvrS [Brucella ceti M490/95/1] gi|264659838|gb|EEZ30099.1| sensory protein BvrS [Brucella pinnipedialis M292/94/1] Length = 601 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ +AG G + DNG G+ E I +R Sbjct: 485 RLGQVVSNLIENARSFVPDDTG--RIVVTLAGEGNRLRILVEDNGPGIPIENIERIFERF 542 Query: 76 CT 77 T Sbjct: 543 YT 544 >gi|167578494|ref|ZP_02371368.1| sensor histidine kinase [Burkholderia thailandensis TXDOH] Length = 459 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Query: 30 LIENSLD-AES-SRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A + +RV+ I G ++ DNG G+ + +R Sbjct: 355 LVDNAIRYAGAGTRVDVEARIDSDGAPVLEVRDNGPGIPPADRERVWERFY 405 >gi|148559842|ref|YP_001259895.1| putative sensor histidine kinase BvrS [Brucella ovis ATCC 25840] gi|148371099|gb|ABQ61078.1| putative sensor histidine kinase BvrS [Brucella ovis ATCC 25840] Length = 589 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ +AG G + DNG G+ E I +R Sbjct: 473 RLGQVVSNLIENARSFVPDDTG--RIVVTLAGEGNRLRILVEDNGPGIPIENIERIFERF 530 Query: 76 CT 77 T Sbjct: 531 YT 532 >gi|2947211|gb|AAC28778.1| sensory protein BvrS [Brucella abortus] Length = 601 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ +AG G + DNG G+ E I +R Sbjct: 485 RLGQVVSNLIENARSFVPDDTG--RIVVTLAGEGNRLRILVEDNGPGIPIENIERIFERF 542 Query: 76 CT 77 T Sbjct: 543 YT 544 >gi|17988318|ref|NP_540952.1| sensor protein CHVG [Brucella melitensis bv. 1 str. 16M] gi|225853521|ref|YP_002733754.1| sensor protein chvG [Brucella melitensis ATCC 23457] gi|256112416|ref|ZP_05453337.1| Sensor protein chvG [Brucella melitensis bv. 3 str. Ether] gi|260562996|ref|ZP_05833482.1| BvrS protein [Brucella melitensis bv. 1 str. 16M] gi|265992116|ref|ZP_06104673.1| sensory protein BvrS [Brucella melitensis bv. 1 str. Rev.1] gi|265993853|ref|ZP_06106410.1| sensory protein BvrS [Brucella melitensis bv. 3 str. Ether] gi|265999253|ref|ZP_05465527.2| BvrS [Brucella melitensis bv. 2 str. 63/9] gi|17984092|gb|AAL53216.1| sensor protein chvg [Brucella melitensis bv. 1 str. 16M] gi|225641886|gb|ACO01800.1| Sensor protein chvG [Brucella melitensis ATCC 23457] gi|260153012|gb|EEW88104.1| BvrS protein [Brucella melitensis bv. 1 str. 16M] gi|262764834|gb|EEZ10755.1| sensory protein BvrS [Brucella melitensis bv. 3 str. Ether] gi|263003182|gb|EEZ15475.1| sensory protein BvrS [Brucella melitensis bv. 1 str. Rev.1] gi|263092869|gb|EEZ17044.1| BvrS [Brucella melitensis bv. 2 str. 63/9] gi|326410089|gb|ADZ67154.1| sensor protein chvG [Brucella melitensis M28] gi|326539806|gb|ADZ88021.1| Sensor protein chvG [Brucella melitensis M5-90] Length = 601 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ +AG G + DNG G+ E I +R Sbjct: 485 RLGQVVSNLIENARSFVPDDTG--RIVVTLAGEGNRLRILVEDNGPGIPIENIERIFERF 542 Query: 76 CT 77 T Sbjct: 543 YT 544 >gi|62290934|ref|YP_222727.1| sensor histidine kinase BvrS [Brucella abortus bv. 1 str. 9-941] gi|82700845|ref|YP_415419.1| ATPase-like ATP-binding protein [Brucella melitensis biovar Abortus 2308] gi|189025148|ref|YP_001935916.1| BvrS, sensor histidine kinase [Brucella abortus S19] gi|237816442|ref|ZP_04595435.1| Sensor protein chvG [Brucella abortus str. 2308 A] gi|254690227|ref|ZP_05153481.1| BvrS, sensor histidine kinase [Brucella abortus bv. 6 str. 870] gi|260546197|ref|ZP_05821937.1| BvrS protein [Brucella abortus NCTC 8038] gi|260755766|ref|ZP_05868114.1| integral membrane sensor signal transduction histidine kinase [Brucella abortus bv. 6 str. 870] gi|260758989|ref|ZP_05871337.1| integral membrane sensor signal transduction histidine kinase [Brucella abortus bv. 4 str. 292] gi|260760713|ref|ZP_05873056.1| integral membrane sensor signal transduction histidine kinase [Brucella abortus bv. 2 str. 86/8/59] gi|260884790|ref|ZP_05896404.1| sensory protein BvrS [Brucella abortus bv. 9 str. C68] gi|261215042|ref|ZP_05929323.1| integral membrane sensor signal transduction histidine kinase [Brucella abortus bv. 3 str. Tulya] gi|297247319|ref|ZP_06931037.1| bvrS; BvrS, sensor histidine kinase [Brucella abortus bv. 5 str. B3196] gi|62197066|gb|AAX75366.1| BvrS, sensor histidine kinase [Brucella abortus bv. 1 str. 9-941] gi|82616946|emb|CAJ12049.1| ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Bacterial sensor protein, C-term [Brucella melitensis biovar Abortus 2308] gi|189020720|gb|ACD73442.1| BvrS, sensor histidine kinase [Brucella abortus S19] gi|237788509|gb|EEP62724.1| Sensor protein chvG [Brucella abortus str. 2308 A] gi|260096304|gb|EEW80180.1| BvrS protein [Brucella abortus NCTC 8038] gi|260669307|gb|EEX56247.1| integral membrane sensor signal transduction histidine kinase [Brucella abortus bv. 4 str. 292] gi|260671145|gb|EEX57966.1| integral membrane sensor signal transduction histidine kinase [Brucella abortus bv. 2 str. 86/8/59] gi|260675874|gb|EEX62695.1| integral membrane sensor signal transduction histidine kinase [Brucella abortus bv. 6 str. 870] gi|260874318|gb|EEX81387.1| sensory protein BvrS [Brucella abortus bv. 9 str. C68] gi|260916649|gb|EEX83510.1| integral membrane sensor signal transduction histidine kinase [Brucella abortus bv. 3 str. Tulya] gi|297174488|gb|EFH33835.1| bvrS; BvrS, sensor histidine kinase [Brucella abortus bv. 5 str. B3196] Length = 601 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ +AG G + DNG G+ E I +R Sbjct: 485 RLGQVVSNLIENARSFVPDDTG--RIVVTLAGEGNRLRILVEDNGPGIPIENIERIFERF 542 Query: 76 CT 77 T Sbjct: 543 YT 544 >gi|330991504|ref|ZP_08315455.1| Sensor histidine kinase malK [Gluconacetobacter sp. SXCC-1] gi|329761523|gb|EGG78016.1| Sensor histidine kinase malK [Gluconacetobacter sp. SXCC-1] Length = 806 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTS 65 A+ EL++NS DA + RV+ V + I D+G GM Sbjct: 50 AVFELVKNSFDARARRVDIVFDNN-HNEIWIVDDGKGMNE 88 >gi|325279768|ref|YP_004252310.1| DNA topoisomerase type IIA subunit B region 2 domain-containing protein [Odoribacter splanchnicus DSM 20712] gi|324311577|gb|ADY32130.1| DNA topoisomerase type IIA subunit B region 2 domain protein [Odoribacter splanchnicus DSM 20712] Length = 611 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 83/273 (30%), Gaps = 41/273 (15%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 +KE+++NS+D A + + + + D G G+ + V +SK++ Sbjct: 44 VKEVVDNSIDEFAMGAG-TEITIKVED---RKVSVRDFGRGIP---LGKLVD--ASSKMN 94 Query: 82 D----DFSNI-HTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAI----SGEKISSV 131 D + G G + ++ A+S + S + KI Sbjct: 95 TGAKYDSEAFKKSVGLNGVGIKAVNALSESFEIQSFRDGETKYVRYCRAKIVEERKIEPT 154 Query: 132 RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI-- 189 T +D+F + +++ ++ F+ Sbjct: 155 DQPNGTQVTFFADKDIFGN----------YHYIAEYLEAMVKNYVFLNTGLTIFFNDHKY 204 Query: 190 --KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVE--LNEKSNEITLQGYTGIPTFNRG 245 K Y + ++ +G I + GED + + G Sbjct: 205 YSKRGLYDLLMENMSGEGLYPIIHLKGEDIEMAMTHGRQYGEEYYSFVNGQHTTQGGTHL 264 Query: 246 NANQFYVFINGR-TVQDKFILSTIRTAYAETIP 277 +A + V R + F +S IRT+ I Sbjct: 265 SAFREAVAKTIRDFYKKDFEISDIRTSIIGAIS 297 >gi|238028730|ref|YP_002912961.1| C4-dicarboxylate transport sensor histidine kinase DctB [Burkholderia glumae BGR1] gi|237877924|gb|ACR30257.1| C4-dicarboxylate transport sensor histidine kinase DctB [Burkholderia glumae BGR1] Length = 662 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 20/91 (21%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + R++ I + + DNG G+ E +P + Sbjct: 545 RLEQVLINLLGNALDAVGGVAAPRIDVTIEATPATIVITVADNGPGVPPELLPRLFEPFF 604 Query: 77 TSKISDDFSNIHTFGFRGEAL-----PSIGA 102 T+K G RG L SI + Sbjct: 605 TTK---------EMG-RGLGLGLAISSSIAS 625 >gi|323524614|ref|YP_004226767.1| ATP-binding region ATPase domain-containing protein [Burkholderia sp. CCGE1001] gi|323381616|gb|ADX53707.1| ATP-binding region ATPase domain protein [Burkholderia sp. CCGE1001] Length = 666 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + R+ I S F ++DNG G+ + +P + Sbjct: 546 RLEQVLINLLGNALDATAGSGAPRISVHIEVAADSLSFAVSDNGPGIPEDVLPRLFEPFF 605 Query: 77 TSK 79 T+K Sbjct: 606 TTK 608 >gi|256827174|ref|YP_003151133.1| DNA mismatch repair protein [Cryptobacterium curtum DSM 15641] gi|256583317|gb|ACU94451.1| DNA mismatch repair enzyme (predicted ATPase) [Cryptobacterium curtum DSM 15641] Length = 373 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 27/143 (18%) Query: 26 AIKELIENSLDAESSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDF 84 + E++ N+ DA + + I+ + D+G G+ E + TSK+ D Sbjct: 52 IVIEMLRNARDAHAKLIFVAISRTESTRRITMIDDGDGVPDELQETIFEARVTSKL--DS 109 Query: 85 SNIHTFG--FRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIV 142 ++ T+G RG AL +I + V + G+ Sbjct: 110 VHMDTWGIHGRGMALYAI----------------------KMNAAQAFVAASTLAGGSSF 147 Query: 143 EVRDLFFTIPARLNFLKSEQVET 165 V +P + + Q Sbjct: 148 VVETDLGNLPEKRDQSAHPQFSF 170 >gi|206559121|ref|YP_002229881.1| two-component regulatory system, sensor kinase protein [Burkholderia cenocepacia J2315] gi|198035158|emb|CAR51032.1| two-component regulatory system, sensor kinase protein [Burkholderia cenocepacia J2315] Length = 669 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 20/91 (21%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + +E IA + ++ DNG G+ + +P + Sbjct: 549 RLEQVLINLLGNALDAVAGVAAPAIEVTIAVSAATLAVEVRDNGSGIAPDLLPRLFEPFF 608 Query: 77 TSKISDDFSNIHTFGFRGEAL-----PSIGA 102 T+K G RG L SI + Sbjct: 609 TTK---------EMG-RGLGLGLAISSSIAS 629 >gi|149184881|ref|ZP_01863198.1| hypothetical protein ED21_17547 [Erythrobacter sp. SD-21] gi|148830992|gb|EDL49426.1| hypothetical protein ED21_17547 [Erythrobacter sp. SD-21] Length = 545 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 11/111 (9%) Query: 31 IENSLDAESSRVETVIA--GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIH 88 I+NS+ A +S V I G+ F DNG GM E + A R+ + +N+ Sbjct: 32 IDNSIAANASEVNVRIELAEDGRKFVCFGDNGDGMNGEMLFNA-MRYG----APARANLA 86 Query: 89 TFGFRGEAL--PSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPVAM 136 + G G L S +V T++SR A++A E + M Sbjct: 87 SLGKFGLGLKTAS-SSVCLRFTVISRQSDEADFAKLAWDLEHVEEQNQWEM 136 >gi|98991108|gb|ABF60572.1| DNA gyrase subunit B [Mesoplasma lactucae ATCC 49193] Length = 553 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 15/82 (18%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT--------SEE 67 + + E+++NS+D A ++ +E I G + DNG G+ Sbjct: 5 VTGLHHLVWEILDNSIDEAMAGEATHIEVTITKNG--EVIVQDNGRGIPVGINHDTGKTA 62 Query: 68 IPMAVQR-HCTSKISDDFSNIH 88 + + + H K + I Sbjct: 63 LELVFTQLHAGGKFDSESYKIS 84 >gi|170734217|ref|YP_001766164.1| histidine kinase [Burkholderia cenocepacia MC0-3] gi|169817459|gb|ACA92042.1| histidine kinase [Burkholderia cenocepacia MC0-3] Length = 669 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 20/91 (21%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + +E IA + ++ DNG G+ + +P + Sbjct: 549 RLEQVLINLLGNALDAVAGVAAPAIEVTIAVSAATLAVEVRDNGSGIAPDLLPRLFEPFF 608 Query: 77 TSKISDDFSNIHTFGFRGEAL-----PSIGA 102 T+K G RG L SI + Sbjct: 609 TTK---------EMG-RGLGLGLAISSSIAS 629 >gi|107023805|ref|YP_622132.1| periplasmic sensor signal transduction histidine kinase [Burkholderia cenocepacia AU 1054] gi|116690892|ref|YP_836515.1| periplasmic sensor signal transduction histidine kinase [Burkholderia cenocepacia HI2424] gi|105893994|gb|ABF77159.1| periplasmic sensor signal transduction histidine kinase [Burkholderia cenocepacia AU 1054] gi|116648981|gb|ABK09622.1| periplasmic sensor signal transduction histidine kinase [Burkholderia cenocepacia HI2424] Length = 669 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 20/91 (21%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + +E IA + ++ DNG G+ + +P + Sbjct: 549 RLEQVLINLLGNALDAVAGVAAPAIEVTIAVSAATLAVEVRDNGSGIAPDLLPRLFEPFF 608 Query: 77 TSKISDDFSNIHTFGFRGEAL-----PSIGA 102 T+K G RG L SI + Sbjct: 609 TTK---------EMG-RGLGLGLAISSSIAS 629 >gi|302342954|ref|YP_003807483.1| histidine kinase [Desulfarculus baarsii DSM 2075] gi|301639567|gb|ADK84889.1| histidine kinase [Desulfarculus baarsii DSM 2075] Length = 182 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 30 LIENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCT 77 L+ENSL+A ++ VE I + I DNG GM ++ + A T Sbjct: 11 LVENSLNAGANLVEIDIDEQPLADRMTVTINDNGKGMDAQTLARASDPFFT 61 >gi|294660440|ref|NP_853202.2| DNA topoisomerase IV subunit B [Mycoplasma gallisepticum str. R(low)] gi|33860191|sp|Q59526|PARE_MYCGA RecName: Full=DNA topoisomerase 4 subunit B; AltName: Full=Topoisomerase IV subunit B; Short=TopIIB gi|284812100|gb|AAP56770.2| DNA topoisomerase IV subunit B [Mycoplasma gallisepticum str. R(low)] gi|284930684|gb|ADC30623.1| DNA topoisomerase IV subunit B [Mycoplasma gallisepticum str. R(high)] Length = 633 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 36/241 (14%), Positives = 73/241 (30%), Gaps = 23/241 (9%) Query: 29 ELIENSLD-A---ESSRVETVIAGGGKSFFQITDNGFGMT-----SEEIPMA----VQRH 75 EL +N++D A ++++E V G +TDNG G+ + + H Sbjct: 41 ELFDNAVDEALNGSANKIEVVHKKDG--SIIVTDNGRGIPVGKNLATNLSTVDTVYTVLH 98 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D + + G G + A+S +++ I G KI Sbjct: 99 AGGKFDDQAYKV-SGGLHGVGASVVNALSRKLIVTVHRDGGMYESIYQDGGKIIQPLKKV 157 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 N + + K+ Q +I + + + + + F + Sbjct: 158 GNSTKHGTIVQFW----PDPTIFKNIQFNPYMIKERLHESSFLFKGLKIVFVDENNPELS 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 F + +G + I+ + +I + G + + F N Sbjct: 214 QTFIAKDGILEYLKYVNENKKSISKIIPFKGDYEKIVVDGCF---QYTDNESELIISFAN 270 Query: 256 G 256 Sbjct: 271 S 271 >gi|300114694|ref|YP_003761269.1| DNA topoisomerase IV subunit B [Nitrosococcus watsonii C-113] gi|299540631|gb|ADJ28948.1| DNA topoisomerase IV, B subunit [Nitrosococcus watsonii C-113] Length = 628 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 66/190 (34%), Gaps = 39/190 (20%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 +RP+ +E+I+NS+D A ++ ++ V+ G + D+G GM EE I Sbjct: 30 QRPNHLAQEVIDNSVDEAIAGFATHIDVVLQSDG--SLTVRDDGRGMPVDLHPEERLPGI 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRG----------EALPSIGAVSHLTLMSRPPQNNT 117 + + R H K S ++ F G AL S L + R Sbjct: 88 EVILSRLHAGGKFSS-----KSYRFAGGLHGVGVSVVNALSS-----RLEVWVRRDSCEY 137 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 A + + + V + F + + + ++R A+ Sbjct: 138 HIAFANGERVSALRAINKVGKRSTGTVLRFW----PDPAFFDTPKFSVARLKHILRAKAV 193 Query: 178 AYPKVSFTFS 187 P + TFS Sbjct: 194 LCPGLQVTFS 203 >gi|183238622|gb|ACC60952.1| DNA gyrase subunit B [Mycoplasma feliminutum] Length = 549 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A ++RV+ I ++ ++ D+G G+ + Sbjct: 11 VYEIVDNSIDEALAGFATRVDVEILKD--NYIRVKDDGRGIPVD 52 >gi|90409659|ref|ZP_01217676.1| hypothetical protein P3TCK_02811 [Photobacterium profundum 3TCK] gi|90329012|gb|EAS45269.1| hypothetical protein P3TCK_02811 [Photobacterium profundum 3TCK] Length = 181 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 5/65 (7%) Query: 22 RPSIAIKELIENSLDA---ESS-RVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + LI N++DA + ++ + + DNG G+ +E+IP Sbjct: 73 RLEQVLVNLISNAIDAVEHNPTPQITIAVGESLSTVQIIVKDNGAGIPTEDIPHIFDPFY 132 Query: 77 TSKIS 81 T K+S Sbjct: 133 TRKVS 137 >gi|304316576|ref|YP_003851721.1| histidine kinase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778078|gb|ADL68637.1| histidine kinase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 181 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 3/49 (6%) Query: 32 ENSLDAESSRVETVIA-GGGKSFFQIT--DNGFGMTSEEIPMAVQRHCT 77 +NSL A + V+ + K + D+G GM E + T Sbjct: 13 QNSLKAGAKNVKIELDIDHSKDLLTVIVDDDGCGMEEEFLSKVFDPFTT 61 >gi|56479070|ref|YP_160659.1| hypothetical protein ebA6357 [Aromatoleum aromaticum EbN1] gi|56315113|emb|CAI09758.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 497 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 17/112 (15%) Query: 22 RPSIAIKELIENSLDAESSRVETVIAGGGKS--FFQITDNGFGMTSEEIPMA---VQRH- 75 AI ++I+NS+ A + ++ I I D+G GM +E+ A R+ Sbjct: 29 SLETAISDIIDNSVTAGARQIRI-ITEACIDEPLIAIVDDGEGMAEDELIAAMRPGSRNP 87 Query: 76 -CTSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAIS 124 T D+ G G L S LT++SR + A + Sbjct: 88 LAT---RDEPD----LGRFGLGLKSASFSQCRRLTVVSRKDGKTSAAVWDLD 132 >gi|297162918|gb|ADI12630.1| DNA gyrase subunit B [Streptomyces bingchenggensis BCW-1] Length = 677 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++EL++NS+D A + R++ + A GG ++ DNG G+ Sbjct: 60 VQELVDNSVDEALAGVADRIDVTVLADGG---VRVVDNGRGIP 99 >gi|167616630|ref|ZP_02385261.1| sensor histidine kinase [Burkholderia thailandensis Bt4] gi|257143131|ref|ZP_05591393.1| sensor histidine kinase [Burkholderia thailandensis E264] Length = 459 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Query: 30 LIENSLD-AES-SRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A + +RV+ I G ++ DNG G+ + +R Sbjct: 355 LVDNAIRYAGAGTRVDVEARIDADGAPVLEVRDNGPGIPPADRERVWERFY 405 >gi|153003320|ref|YP_001377645.1| integral membrane sensor signal transduction histidine kinase [Anaeromyxobacter sp. Fw109-5] gi|152026893|gb|ABS24661.1| integral membrane sensor signal transduction histidine kinase [Anaeromyxobacter sp. Fw109-5] Length = 488 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 14/85 (16%) Query: 2 KIRKLSEKIINQIAAGEII-ERPSIAI---KELIENSLDA----ESSRVETVIAG-GGKS 52 +IR L E I G ++ RP + L+ N+ DA + RVE G Sbjct: 358 RIRILEE-----IPEGLVVRARPENVVHVLGSLLANAADAVPDGRAGRVEVRAERRTGAV 412 Query: 53 FFQITDNGFGMTSEEIPMAVQRHCT 77 ++D+G GM E + A T Sbjct: 413 RITVSDDGAGMPPEVLRRAFDPFFT 437 >gi|28569044|gb|AAO47225.1|AF205853_1 DNA gyrase subunit B [Streptomyces rishiriensis] Length = 677 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++EL++NS+D A + R++ + A GG ++ DNG G+ Sbjct: 60 VQELVDNSVDEALAGVADRIDVTVLADGG---VRVVDNGRGIP 99 >gi|28569047|gb|AAO47227.1|AF205854_1 DNA gyrase subunit B [Streptomyces caeruleus] Length = 677 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++EL++NS+D A + R++ + A GG ++ DNG G+ Sbjct: 60 VQELVDNSVDEALAGVADRIDVTVLADGG---VRVVDNGRGIP 99 >gi|83717654|ref|YP_439960.1| sensor histidine kinase [Burkholderia thailandensis E264] gi|83651479|gb|ABC35543.1| sensor histidine kinase [Burkholderia thailandensis E264] Length = 449 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Query: 30 LIENSLD-AES-SRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A + +RV+ I G ++ DNG G+ + +R Sbjct: 345 LVDNAIRYAGAGTRVDVEARIDADGAPVLEVRDNGPGIPPADRERVWERFY 395 >gi|1708089|sp|P50074|GYRBR_STRSH RecName: Full=DNA gyrase subunit B, novobiocin-resistant gi|581742|emb|CAA78951.1| gyrase B (novobiocin-resistant) [Streptomyces caeruleus] Length = 677 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++EL++NS+D A + R++ + A GG ++ DNG G+ Sbjct: 60 VQELVDNSVDEALAGVADRIDVTVLADGG---VRVVDNGRGIP 99 >gi|268678647|ref|YP_003303078.1| DNA gyrase subunit beta [Sulfurospirillum deleyianum DSM 6946] gi|268616678|gb|ACZ11043.1| DNA gyrase, B subunit [Sulfurospirillum deleyianum DSM 6946] Length = 770 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 81/248 (32%), Gaps = 40/248 (16%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTS-----EEIPMA----VQRH 75 E+++NS+D A + ++ + G + TDNG G+ E + A H Sbjct: 40 EVVDNSIDEAMAGYCTNIKVELTREGSAII--TDNGRGIPVGWHEGENMSAATVVLTVLH 97 Query: 76 CTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAI-SGEKI 128 K D + + G G AL S L + N + A Sbjct: 98 AGGKFDKDTYKV-SGGLHGVGVSVVNALSS-----KLVATIKREGNEHRQEFACGIPVTP 151 Query: 129 SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFST 188 V GTI+E ++ + + ++ R +A PK++ Sbjct: 152 LDVVKTTNRTGTIIEFW-------PDATIFETTEFQFEILATRFRELAYLNPKITIELKD 204 Query: 189 IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNAN 248 + R ++ G + + + ++ + AV ++ + +N + Sbjct: 205 QRDGRTELYHF--EGGIKQFVLDLNKKEKVAEAVHYTASVEDVEIDIAM---MYNSTYSE 259 Query: 249 QFYVFING 256 Y F+N Sbjct: 260 ILYSFVNN 267 >gi|254494407|ref|ZP_05107578.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268595502|ref|ZP_06129669.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268597556|ref|ZP_06131723.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268599717|ref|ZP_06133884.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268602061|ref|ZP_06136228.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268604401|ref|ZP_06138568.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268682862|ref|ZP_06149724.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268685009|ref|ZP_06151871.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268687287|ref|ZP_06154149.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|291043039|ref|ZP_06568772.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|226513447|gb|EEH62792.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291] gi|268548891|gb|EEZ44309.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02] gi|268551344|gb|EEZ46363.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19] gi|268583848|gb|EEZ48524.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11] gi|268586192|gb|EEZ50868.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18] gi|268588532|gb|EEZ53208.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1] gi|268623146|gb|EEZ55546.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332] gi|268625293|gb|EEZ57693.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679] gi|268627571|gb|EEZ59971.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035] gi|291013042|gb|EFE05015.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 296 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 26/49 (53%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 AI ELI N+ DA ++ VE + + I DNG GM+ +EI R Sbjct: 40 AIAELIANAYDACATEVEVRLFDKPEHKIVIKDNGIGMSFDEINDFYLR 88 >gi|27466922|ref|NP_763559.1| DNA gyrase subunit B [Staphylococcus epidermidis ATCC 12228] gi|57865927|ref|YP_190090.1| DNA gyrase, B subunit [Staphylococcus epidermidis RP62A] gi|251811368|ref|ZP_04825841.1| DNA gyrase subunit B [Staphylococcus epidermidis BCM-HMP0060] gi|282874725|ref|ZP_06283604.1| DNA gyrase, B subunit [Staphylococcus epidermidis SK135] gi|293367576|ref|ZP_06614229.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus epidermidis M23864:W2(grey)] gi|38604835|sp|Q8CQK4|GYRB_STAES RecName: Full=DNA gyrase subunit B gi|81819302|sp|Q5HK03|GYRB_STAEQ RecName: Full=DNA gyrase subunit B gi|27314464|gb|AAO03601.1|AE016744_4 DNA gyrase subunit B [Staphylococcus epidermidis ATCC 12228] gi|57636585|gb|AAW53373.1| DNA gyrase, B subunit [Staphylococcus epidermidis RP62A] gi|251805117|gb|EES57774.1| DNA gyrase subunit B [Staphylococcus epidermidis BCM-HMP0060] gi|281296441|gb|EFA88956.1| DNA gyrase, B subunit [Staphylococcus epidermidis SK135] gi|291318289|gb|EFE58682.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus epidermidis M23864:W2(grey)] gi|329724157|gb|EGG60675.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU144] gi|329735731|gb|EGG72012.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU028] gi|329736056|gb|EGG72329.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU045] Length = 643 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E VI ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYASHIEVVIEKD--NWIKVTDNGRGIPVD 89 >gi|326483879|gb|EGE07889.1| hypothetical protein TEQG_06921 [Trichophyton equinum CBS 127.97] Length = 544 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 100/282 (35%), Gaps = 11/282 (3%) Query: 106 LTLMSRPPQNNTG-AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQV 163 + + +R + + S P + GT V V + ++P R K Sbjct: 5 VHITTRVLEEQVARTVKFGRDGEPISETPASHPIGTTVRVCNFLQSLPVRRQEAEKKSTK 64 Query: 164 ETNLITDVIRRMAIAYPKVSFTFSTIK-SNRYKMNFQSTNGNFPERISQVIGEDFINNAV 222 I +++ AIA PK + +K + + S + + + ISQ+IG I++ + Sbjct: 65 SILAIKKLLQGYAIARPKTRLSMRLLKSKEQDWIYAPSPSPSARDAISQIIGSTVISSCI 124 Query: 223 ELNEKSNEITLQGYT-GIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRY 281 LN + + + + V + ++ +L I + + + Sbjct: 125 SLNSCHPVTRGRDSSDSVIEGHDTLTIHVSVVVPKPAADNRAVLHIIESVFMDIYSPETS 184 Query: 282 PVVVLLLEIDPRQVDVNVH---PAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLS 338 + Q+ V++ K+ RFR + I ++ + + Sbjct: 185 TITPTPDTRQSNQLTVDISSPASTKNCGRFRTNETLTPTI-NPWTLSLAAQRLRDPESHL 243 Query: 339 KKMISSFHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTND 380 F AP+ +LP + +++ + +++ +LS +D Sbjct: 244 LTPQREFQ---APQNNLPPRSPNISMKGGRASMRQAKLSLHD 282 >gi|300689720|ref|YP_003750715.1| hypothetical protein RPSI07_0006 [Ralstonia solanacearum PSI07] gi|299076780|emb|CBJ49387.1| conserved hypothethical protein [Ralstonia solanacearum PSI07] Length = 483 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 5/119 (4%) Query: 25 IAIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 A+ ++I+NS+ A ++ V+ G S I D+G GM E+ A+ S + D Sbjct: 14 AAVADIIDNSIAAGATHVDVQFSWDGTASRLAILDDGRGMDDSELESAMTLGDKSPL--D 71 Query: 84 FSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGT 140 + G G L S LT+ S ++ + + + A+ G Sbjct: 72 ARDPEDLGRFGMGLKTASFSQCRRLTVASAKSGSHACLRWDLDELARNPDIGWALLEGP 130 >gi|260787200|ref|XP_002588642.1| hypothetical protein BRAFLDRAFT_285500 [Branchiostoma floridae] gi|229273809|gb|EEN44653.1| hypothetical protein BRAFLDRAFT_285500 [Branchiostoma floridae] Length = 1932 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%) Query: 29 ELIENSLDAESSRV-------ETVIAG---GGKSFFQITDNGFGMTSEEI-PMAVQRHCT 77 ELI+N+L A + V ++ GGK + DNG GMTS+++ AV R Sbjct: 19 ELIDNALAATADNVGDRNIELRIILDDRIEGGKHCICVLDNGHGMTSKDLNDWAVYRL-- 76 Query: 78 SKI-SDDFSNIHTFGF 92 SK D GF Sbjct: 77 SKFNRKDRRRSTELGF 92 >gi|332535128|ref|ZP_08410938.1| topoisomerase IV subunit B [Pseudoalteromonas haloplanktis ANT/505] gi|332035446|gb|EGI71944.1| topoisomerase IV subunit B [Pseudoalteromonas haloplanktis ANT/505] Length = 629 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 78/214 (36%), Gaps = 24/214 (11%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A ++R++ ++ + +++D+G GM EE + Sbjct: 32 RPNHLGQEVIDNSVDEAMAGHATRIDVILHED--NSLEVSDDGRGMPIDIHPEEGIPGVE 89 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAI-SGE 126 + + H K S+ + G G + + A+S + + R Sbjct: 90 LIFTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSTRVEVTVRRDAQQYRMAFENGDKV 148 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 + SV T VR + + ++ S + +++ A+ P + F Sbjct: 149 EDLSVIGTVGKRNTGTTVR-FWADV----SYFDSPNYSITKLNHLLKAKAVLCPGLRIKF 203 Query: 187 STIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 K + + G I V G + + Sbjct: 204 -VNKQTKETKEWFYETGLKDYLIEAVKGFETLPQ 236 >gi|327312581|ref|YP_004328018.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein [Prevotella denticola F0289] gi|326946296|gb|AEA22181.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Prevotella denticola F0289] Length = 397 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Query: 26 AIKELIENSLDA--ESS-RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTSK 79 ++ L +N++D+ +S + + G+ +++D G G+ ++I + T+K Sbjct: 291 VVENLCKNAVDSMGGASGSITIRLEEAGRRVVVEVSDTGRGIKKKDIRNVFRPGFTTK 348 >gi|194222877|ref|XP_001501704.2| PREDICTED: MORC family CW-type zinc finger 1 [Equus caballus] Length = 980 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVET-VIAG----GGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA ++R++ + GG + D+G GM+ EE + + K+ Sbjct: 27 ELLDNARDAGAARLDVFSVDNENLQGGFMLCFL-DDGCGMSPEEASNIIYFGTSKKLLST 85 Query: 84 FSNIHTFG 91 I +G Sbjct: 86 LKFIGQYG 93 >gi|153956436|ref|YP_001397201.1| sensory transduction kinase [Clostridium kluyveri DSM 555] gi|219856744|ref|YP_002473866.1| hypothetical protein CKR_3401 [Clostridium kluyveri NBRC 12016] gi|146349294|gb|EDK35830.1| Predicted sensory transduction kinase [Clostridium kluyveri DSM 555] gi|219570468|dbj|BAH08452.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 307 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 28/47 (59%), Gaps = 2/47 (4%) Query: 30 LIENSLD-AESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQR 74 L++N ++ + +++++ + G K +ITDNG G+ ++P +R Sbjct: 210 LVQNVINHSRATQIKIEMTQEGNKIEIRITDNGIGIEKADLPHIFER 256 >gi|70607074|ref|YP_255944.1| DNA topoisomerase VI subunit B [Sulfolobus acidocaldarius DSM 639] gi|68567722|gb|AAY80651.1| DNA topoisomerase VI subunit B [Sulfolobus acidocaldarius DSM 639] Length = 532 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 14/72 (19%) Query: 22 RPSIA----IKELIENSLDAE-------SSRVETVIAGGGKS--FFQITDNGFGMTSEEI 68 P+ A ++ELIEN+LDA S ++ + K + DNG G+ + Sbjct: 27 NPARALYQTVRELIENALDATDVHNLLPSLKISIELVDQQKQIYKVNVEDNGIGIPPHVV 86 Query: 69 PMAVQR-HCTSK 79 P A + +SK Sbjct: 87 PNAFGKVLYSSK 98 >gi|325268706|ref|ZP_08135335.1| sensor histidine kinase [Prevotella multiformis DSM 16608] gi|324988950|gb|EGC20904.1| sensor histidine kinase [Prevotella multiformis DSM 16608] Length = 397 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Query: 26 AIKELIENSLDA--ESS-RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTSK 79 ++ L +N++D+ +S + + G+ +++D G G+ ++I + T+K Sbjct: 291 VVENLCKNAVDSMGGASGSITIRLEEAGRRVVVEVSDTGRGIKKKDIRNVFRPGFTTK 348 >gi|325855166|ref|ZP_08171789.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Prevotella denticola CRIS 18C-A] gi|325483903|gb|EGC86847.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Prevotella denticola CRIS 18C-A] Length = 397 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Query: 26 AIKELIENSLDA--ESS-RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTSK 79 ++ L +N++D+ +S + + G+ +++D G G+ ++I + T+K Sbjct: 291 VVENLCKNAVDSMGGASGSITIRLEEAGRRVVVEVSDTGRGIKKKDIRNVFRPGFTTK 348 >gi|325287244|ref|YP_004263034.1| integral membrane sensor signal transduction histidine kinase [Cellulophaga lytica DSM 7489] gi|324322698|gb|ADY30163.1| integral membrane sensor signal transduction histidine kinase [Cellulophaga lytica DSM 7489] Length = 463 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 45/94 (47%), Gaps = 11/94 (11%) Query: 7 SEKIINQIAAGEIIERP-----SIAIKELIENSLDAESSRVETVIAG---GGKSFFQITD 58 I+N + + E++ R + A+ ++EN++ S+ ++ I G+ ITD Sbjct: 336 DVTIVNNVCSAEVLLRIDKFHFTTALLNILENAVKYGSASIKITIETKHINGEYCINITD 395 Query: 59 NGFGMTSEEIPMAVQRHCTSKISD-DFSNIHTFG 91 NG G+ + +P+ + ++++ + N+ G Sbjct: 396 NGIGIPEKNLPLIFDKFY--RVTEGNLHNVKGLG 427 >gi|304405884|ref|ZP_07387542.1| DNA gyrase, B subunit [Paenibacillus curdlanolyticus YK9] gi|304345127|gb|EFM10963.1| DNA gyrase, B subunit [Paenibacillus curdlanolyticus YK9] Length = 636 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 82/242 (33%), Gaps = 25/242 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEE---IPMAVQR------H 75 E+++NS+D A + ++ ++ + + DNG G+ E + + H Sbjct: 44 EVVDNSIDEALAGFCTHIDVIVHED--NSITVVDNGRGIPVGENTKLKKSTVEVVMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K + + + G G + + A+S H+T+ + + Q V Sbjct: 102 AGGKFGGEGYKV-SGGLHGVGVSVVNALSEHVTVTVKR--DGHVYQQEYRRGAPQYDIKV 158 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 + + P F ++ E ++ IR +A +S + + Sbjct: 159 IGDSEETGTIVQFK---PDPEIFTETTVYEYEILQSRIRELAFLNKGISISLT--DERTG 213 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 + N +G E + + + + + + +Q + +N ++ Y F Sbjct: 214 QSNIYKYDGGIIEFVKYLNRNREALHETPIYVEGEKDHIQVEVAL-QYNDSYSDNIYSFA 272 Query: 255 NG 256 N Sbjct: 273 NN 274 >gi|11498260|ref|NP_069486.1| DNA topoisomerase VI subunit B [Archaeoglobus fulgidus DSM 4304] gi|3122957|sp|O29605|TOP6B_ARCFU RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|2649967|gb|AAB90588.1| DNA topoisomerase VI, subunit B (top6B) [Archaeoglobus fulgidus DSM 4304] Length = 602 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 64/186 (34%), Gaps = 40/186 (21%) Query: 25 IAIKELIENSLDA--ESS---RVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQR-HCT 77 +KE ++N+LDA E+ + I+ + DNG G+ E+IP + Sbjct: 32 TVVKEAVDNALDACEEAGILPDIFVRISKVDDHFKIVVEDNGPGIPREQIPKVFGKLLYG 91 Query: 78 SKISDDFSNIH-TFGFRGEALPSIGAV--SHL------TLMSRPPQNNTG--------AQ 120 S+ + I + G +G + AV + L T++S+ P + + Sbjct: 92 SRFHE----IRQSRGQQGIGIS--AAVLYAQLTTGKPATVISKTPDEDRAKKVVLYINTK 145 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + GT +E+ + R + + +R ++ P Sbjct: 146 KNEPEIVEEGEEEWYLPSGTKIELEVAGNYVRERKQS----------VYEYLRETSVINP 195 Query: 181 KVSFTF 186 TF Sbjct: 196 HAKITF 201 >gi|117919182|ref|YP_868374.1| DNA topoisomerase IV subunit B [Shewanella sp. ANA-3] gi|117611514|gb|ABK46968.1| DNA topoisomerase IV subunit B [Shewanella sp. ANA-3] Length = 628 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 84/215 (39%), Gaps = 29/215 (13%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A ++++E V+ + ++TD+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHATKIEVVLHTD--NSLEVTDDGRGMPVDIHPEEGIPGV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAIS 124 + + + H K S+ + G G + + A+S + + R + + Sbjct: 88 ELILTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSRRVEVTVRRDGQVYDIAFENGFK 146 Query: 125 GEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 E++ N GT V ++ S + + ++R A+ P + Sbjct: 147 VEELKVTGTCGRRNTGTRVHFW-------PDASYFDSANFSNSKLIYLLRAKAVLCPGLR 199 Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFI 218 F+ + +++ + + +G++ + Sbjct: 200 IKFTN--KHTNEVHEWYYESGLTDYLKAAVGDNLM 232 >gi|113971563|ref|YP_735356.1| DNA topoisomerase IV subunit B [Shewanella sp. MR-4] gi|114046265|ref|YP_736815.1| DNA topoisomerase IV subunit B [Shewanella sp. MR-7] gi|113886247|gb|ABI40299.1| DNA topoisomerase IV subunit B [Shewanella sp. MR-4] gi|113887707|gb|ABI41758.1| DNA topoisomerase IV subunit B [Shewanella sp. MR-7] Length = 628 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 84/215 (39%), Gaps = 29/215 (13%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A ++++E V+ + ++TD+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHATKIEVVLHTD--NSLEVTDDGRGMPVDIHPEEGIPGV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAIS 124 + + + H K S+ + G G + + A+S + + R + + Sbjct: 88 ELILTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSRRVEVTVRRDGQVYDIAFENGFK 146 Query: 125 GEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 E++ N GT V ++ S + + ++R A+ P + Sbjct: 147 VEELKVTGTCGRRNTGTRVHFW-------PDASYFDSANFSNSKLIYLLRAKAVLCPGLR 199 Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFI 218 F+ + +++ + + +G++ + Sbjct: 200 IKFTN--KHTNEVHEWYYESGLTDYLKAAVGDNLM 232 >gi|304388623|ref|ZP_07370687.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091] gi|304337440|gb|EFM03610.1| conserved hypothetical protein [Neisseria meningitidis ATCC 13091] gi|325131420|gb|EGC54129.1| hypothetical protein NMBM6190_1925 [Neisseria meningitidis M6190] gi|325137453|gb|EGC60040.1| hypothetical protein NMBES14902_1903 [Neisseria meningitidis ES14902] gi|325141453|gb|EGC63929.1| hypothetical protein NMB9615945_1950 [Neisseria meningitidis 961-5945] gi|325199102|gb|ADY94558.1| conserved hypothetical protein [Neisseria meningitidis G2136] Length = 548 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 26/49 (53%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 AI ELI N+ DA ++ VE + + I DNG GM+ +EI R Sbjct: 29 AIAELIANAYDACATEVEVRLFDKPEHKIVIKDNGIGMSFDEINDFYLR 77 >gi|261393339|emb|CAX50973.1| conserved hypothetical protein [Neisseria meningitidis 8013] Length = 548 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 26/49 (53%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 AI ELI N+ DA ++ VE + + I DNG GM+ +EI R Sbjct: 29 AIAELIANAYDACATEVEVRLFDKPEHKIVIKDNGIGMSFDEINDFYLR 77 >gi|157368815|ref|YP_001476804.1| ATPase domain-containing protein [Serratia proteamaculans 568] gi|157320579|gb|ABV39676.1| ATP-binding region ATPase domain protein [Serratia proteamaculans 568] Length = 720 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 20 IERPSIAIKELIENSLDAESSRVETVIAGGGK---SFFQITDNGFGMTSE 66 I+ A+ EL++N+ DA+S + K + ITD G GM+ + Sbjct: 24 IQDSYAAVVELVKNAYDADSPDIHIEFRANSKLNTTSIVITDRGHGMSRD 73 >gi|218767414|ref|YP_002341926.1| hypothetical protein NMA0428 [Neisseria meningitidis Z2491] gi|121051422|emb|CAM07715.1| conserved hypothetical protein [Neisseria meningitidis Z2491] gi|319409677|emb|CBY89978.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594] gi|325204961|gb|ADZ00415.1| conserved hypothetical protein [Neisseria meningitidis M01-240355] Length = 548 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 26/49 (53%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 AI ELI N+ DA ++ VE + + I DNG GM+ +EI R Sbjct: 29 AIAELIANAYDACATEVEVRLFDKPEHKIVIKDNGIGMSFDEINDFYLR 77 >gi|288924553|ref|ZP_06418490.1| sensor histidine kinase [Prevotella buccae D17] gi|288338340|gb|EFC76689.1| sensor histidine kinase [Prevotella buccae D17] Length = 380 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 20/89 (22%) Query: 2 KI-RKLS-EKIINQIAAGE---IIERPSIAIKELIENSLDA-----ESSRVETVIAGGG- 50 KI + L + II ++ A +IE + +N++DA V + G Sbjct: 257 KIVKILPKDDIIIKLNASLFEWVIENLA-------KNAIDAMGGVPG--TVTLRVEDAGE 307 Query: 51 KSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 K+ +++D G G+ +++ + T+K Sbjct: 308 KAVIEVSDTGRGIRRKDVGNVFRPGFTTK 336 >gi|225570072|ref|ZP_03779097.1| hypothetical protein CLOHYLEM_06168 [Clostridium hylemonae DSM 15053] gi|225161542|gb|EEG74161.1| hypothetical protein CLOHYLEM_06168 [Clostridium hylemonae DSM 15053] Length = 245 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 18/69 (26%) Query: 18 EIIERPSIAIKELIENSLDA----ESSRVET---VIAGGGKSFFQITDNGFGMTSEEIPM 70 E+I L++N+ DA + GK + DNG G+ E++ Sbjct: 144 EVILN-------LLQNAKDAVNPDGA----IYFHAFTEAGKLCISVRDNGCGIPQEDMEH 192 Query: 71 AVQRHCTSK 79 + T K Sbjct: 193 IFEPFVTYK 201 >gi|70704950|gb|AAZ06866.1| DNA gyrase subunit B [Acholeplasma multilocale] Length = 539 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 15/73 (20%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT--------SEEIPMAVQR-H 75 E+I+NS+D A + ++ I G + DNG G+ + + + H Sbjct: 11 EIIDNSIDEAMAGEADTIKVTITNDG--EVIVQDNGRGIPVGIQQDSGKSALELVFTQLH 68 Query: 76 CTSKISDDFSNIH 88 K D I Sbjct: 69 AGGKFDSDSYKIS 81 >gi|317509459|ref|ZP_07967077.1| DNA gyrase, subunit B [Segniliparus rugosus ATCC BAA-974] gi|316252288|gb|EFV11740.1| DNA gyrase, subunit B [Segniliparus rugosus ATCC BAA-974] Length = 678 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 69/178 (38%), Gaps = 31/178 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE---------EIPMAV 72 ++E+++NS+D A ++RV+ + A GG ++ D+G G+ E+ + V Sbjct: 51 VQEVVDNSVDEAMAGYATRVDVTLLADGG---IEVVDDGRGIPVAPHASGPPTVEVVLTV 107 Query: 73 QRHCTSKISDDFSNIHTFGFRGEALPSIGAVS---HLTLMSRPPQNNTGAQIAISGEKIS 129 H K D + + G G + + A+S + + + A K Sbjct: 108 L-HAGGKFDSDSYAV-SGGLHGVGISVVNALSYKLEVEI----DVDGHHWTQAYDNAKPG 161 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFS 187 + A T VR F+ P ++ + + + I ++ MA + T + Sbjct: 162 PLVKGAAVKRTGTTVR--FWADP---KIFETTRYDFDTIARRLQEMAFLNKGLIITLT 214 >gi|241667848|ref|ZP_04755426.1| DNA topoisomerase IV subunit B [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876390|ref|ZP_05249100.1| topoisomerase IV [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842411|gb|EET20825.1| topoisomerase IV [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 627 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E P+ I+E+++NS+D A +S++ + + ++ D+G GM + Sbjct: 29 ENPNHLIQEIVDNSVDEVLAGYASKINITLYDD--NSIEVADDGRGMPVD 76 >gi|154687256|ref|YP_001422417.1| KinB [Bacillus amyloliquefaciens FZB42] gi|154353107|gb|ABS75186.1| KinB [Bacillus amyloliquefaciens FZB42] Length = 427 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%) Query: 30 LIENSLDAESS---RVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+NS++A S R+E + QITDNG GM+ EE+ + + T K Sbjct: 331 LIKNSIEAVPSENGRIEVSVQKQEEMILIQITDNGIGMSDEELQKLGKPYYTLK 384 >gi|126668651|ref|ZP_01739603.1| hypothetical protein MELB17_05489 [Marinobacter sp. ELB17] gi|126626910|gb|EAZ97555.1| hypothetical protein MELB17_05489 [Marinobacter sp. ELB17] Length = 632 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 21/105 (20%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEE------IPMAVQRHCTSKISD 82 ELI N+ DA + V + G + + D+G GM+ E+ + +A + T ISD Sbjct: 33 ELIANAYDANAKNVYIIQEKGSLT---VEDDGHGMSYEDGDIAKYLNVAQE---TRSISD 86 Query: 83 DFSNIHT------FGFRGEA-LPSIGAVS-HLTLMSRPPQNNTGA 119 + G +G L ++ +VS ++ + + +G Sbjct: 87 QEYVSGSDNKRKKMGRKGVGKLAAL-SVSPNVEIKTVRNGERSGF 130 >gi|167035742|ref|YP_001670973.1| hypothetical protein PputGB1_4751 [Pseudomonas putida GB-1] gi|166862230|gb|ABZ00638.1| hypothetical protein PputGB1_4751 [Pseudomonas putida GB-1] Length = 537 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 9/128 (7%) Query: 24 SIAIKELIENSLDAESSRVETVIAGGGKSFFQ--ITDNGFGMTSEEIPMAVQRHCTSKIS 81 + A+ ++++NS+ A +S+V+ +A K + I DNG GM + + A R+ SK Sbjct: 28 NTAVADIVDNSIAANASKVQLWLAADLKGDIRLLIADNGDGMDRQGLINA-MRYG-SKAR 85 Query: 82 DDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPG 139 + + G G L S L+++SRP ++ V + Sbjct: 86 ---PSAASLGKYGLGLKTASTAFCKRLSVVSRPDGETLPIMATWDLYHVAKVNKWTLLLS 142 Query: 140 TIVEVRDL 147 + L Sbjct: 143 ETCDAEAL 150 >gi|120600194|ref|YP_964768.1| DNA topoisomerase IV subunit B [Shewanella sp. W3-18-1] gi|146291878|ref|YP_001182302.1| DNA topoisomerase IV subunit B [Shewanella putrefaciens CN-32] gi|120560287|gb|ABM26214.1| DNA topoisomerase IV subunit B [Shewanella sp. W3-18-1] gi|145563568|gb|ABP74503.1| DNA topoisomerase IV subunit B [Shewanella putrefaciens CN-32] gi|319425113|gb|ADV53187.1| DNA topoisomerase IV, B subunit [Shewanella putrefaciens 200] Length = 628 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 83/214 (38%), Gaps = 29/214 (13%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A ++++E V+ + ++TD+G GM EE + Sbjct: 31 RPNHLGQEVIDNSVDEALAGHATKIEVVLHLD--NSLEVTDDGRGMPVDIHPEEGIPGVE 88 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAISG 125 + + + H K S+ + G G + + A+S + + R + + Sbjct: 89 LILTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSRRVEVTVRRDGQVYDIAFEHGFKV 147 Query: 126 EKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF 184 E++ N GT V ++ S + + ++R A+ P + Sbjct: 148 EELKVTGTCGRRNTGTRVHFW-------PDASYFDSANFSNSKLIYLLRAKAVLCPGLRI 200 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFI 218 F+ +++ + + +G++ + Sbjct: 201 KFTN--KQTNEVHEWFYESGLTDYLKAAVGDNVM 232 >gi|265983103|ref|ZP_06095838.1| sensory protein BvrS [Brucella sp. 83/13] gi|306837661|ref|ZP_07470530.1| Sensor protein chvG [Brucella sp. NF 2653] gi|306842795|ref|ZP_07475436.1| Sensor protein chvG [Brucella sp. BO2] gi|306843510|ref|ZP_07476111.1| Sensor protein chvG [Brucella sp. BO1] gi|264661695|gb|EEZ31956.1| sensory protein BvrS [Brucella sp. 83/13] gi|306276201|gb|EFM57901.1| Sensor protein chvG [Brucella sp. BO1] gi|306287068|gb|EFM58576.1| Sensor protein chvG [Brucella sp. BO2] gi|306407219|gb|EFM63429.1| Sensor protein chvG [Brucella sp. NF 2653] Length = 601 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ + G G + DNG G+ E I +R Sbjct: 485 RLGQVVSNLIENARSFVPDDTG--RIVVTLTGEGNRLRILVEDNGPGIPIENIERIFERF 542 Query: 76 CT 77 T Sbjct: 543 YT 544 >gi|254718147|ref|ZP_05179958.1| Sensor protein chvG [Brucella sp. 83/13] Length = 589 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ + G G + DNG G+ E I +R Sbjct: 473 RLGQVVSNLIENARSFVPDDTG--RIVVTLTGEGNRLRILVEDNGPGIPIENIERIFERF 530 Query: 76 CT 77 T Sbjct: 531 YT 532 >gi|94957786|gb|ABF47143.1| DNA gyrase subunit B [Entomoplasma somnilux] Length = 552 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 15/73 (20%) Query: 29 ELIENSLD---AES-SRVETVIAGGGKSFFQITDNGFGMT--------SEEIPMAVQR-H 75 E+++NS+D A + ++ I G + D+G G+ + + + H Sbjct: 13 EILDNSIDEAMAGAAHEIKVSITKDG--EIIVQDDGRGIPVGIQKDSGKSALELVFTQLH 70 Query: 76 CTSKISDDFSNIH 88 K D I Sbjct: 71 AGGKFDSDSYKIS 83 >gi|119896649|ref|YP_931862.1| putative two-component sensor kinase [Azoarcus sp. BH72] gi|119669062|emb|CAL92975.1| putative two-component sensor kinase [Azoarcus sp. BH72] Length = 751 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 38/141 (26%) Query: 17 GEIIERPSIAIKELIENSLDAESSRVETVIAGG-----GKSFFQITDNGFGMTSEEIPMA 71 E+I ++A+ EL++N+ DAE+SRV G G +I D+G GM+ + + A Sbjct: 24 SELISNDAVAVIELVKNAYDAEASRVLIKFVGPLQPKQGC--IEIFDDGAGMSLDVVRGA 81 Query: 72 -------VQRHCTSKISDDFSNIHTFGFR--GE------A---LPSIGAVSHLTLMSRPP 113 +R TS + G R GE A L S L L++R Sbjct: 82 WMEPATPGKRQKTS--------SGSKGRRVLGEKGIGRFAAMRLAS-----ELELITRAR 128 Query: 114 QNNTGAQIAISGEKISSVRPV 134 + + + Sbjct: 129 GADQEVYGIFDWTQFEDEQKY 149 >gi|28566177|gb|AAO43433.1| DNA gyrase subunit B [Entomoplasma somnilux] Length = 551 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 15/73 (20%) Query: 29 ELIENSLD---AES-SRVETVIAGGGKSFFQITDNGFGMT--------SEEIPMAVQR-H 75 E+++NS+D A + ++ I G + D+G G+ + + + H Sbjct: 19 EILDNSIDEAMAGAAHEIKVSITKDG--EIIVQDDGRGIPVGIQKDSGKSALELVFTQLH 76 Query: 76 CTSKISDDFSNIH 88 K D I Sbjct: 77 AGGKFDSDSYKIS 89 >gi|197286191|ref|YP_002152063.1| DNA topoisomerase IV subunit B [Proteus mirabilis HI4320] gi|227357310|ref|ZP_03841667.1| DNA topoisomerase IV subunit B [Proteus mirabilis ATCC 29906] gi|194683678|emb|CAR44632.1| DNA topoisomerase IV subunit B [Proteus mirabilis HI4320] gi|227162573|gb|EEI47562.1| DNA topoisomerase IV subunit B [Proteus mirabilis ATCC 29906] Length = 631 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 74/211 (35%), Gaps = 31/211 (14%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE---------- 66 RP+ +E+I+NS+D A +++VE ++ ++ DNG GM + Sbjct: 31 TRPNHLAQEVIDNSVDEALAGHATKVEVILYAD--QSIEVIDNGRGMPVDIHPELKVSAI 88 Query: 67 EIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAI 123 E+ +A H K S+ ++ G G + + A+S + + R + Sbjct: 89 ELILAHL-HAGGKFSNKNYQ-YSGGLHGVGISVVNALSKRIEVTVRREGKIYQIAFENGD 146 Query: 124 SGEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-- 180 E++ + + GT V KS V++ A+ P Sbjct: 147 KVEELHQIGTCAKRDTGTSVHFWPDSTYFDIPRFSSKSLS-------HVLKAKAVLCPGV 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQ 211 VSFT + E +++ Sbjct: 200 NVSFTDKVNNTQETWCYADGLTDYLSEAVAE 230 >gi|253995600|ref|YP_003047664.1| hypothetical protein Mmol_0227 [Methylotenera mobilis JLW8] gi|253982279|gb|ACT47137.1| conserved hypothetical protein [Methylotenera mobilis JLW8] Length = 664 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 29 ELIENSLDAESSRVETVIAGG--GKSFFQITDNGFGMTSEEIPMAV 72 ELI NSLDA+++ +E GK I DNG G T E P Sbjct: 30 ELIWNSLDADATLIEIKEETYGTGKQRIIIADNGAGFTHFEAPSLF 75 >gi|167627291|ref|YP_001677791.1| DNA topoisomerase IV subunit B [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597292|gb|ABZ87290.1| DNA topoisomerase (ATP-hydrolyzing) [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 627 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E P+ I+E+++NS+D A +S++ + + ++ D+G GM + Sbjct: 29 ENPNHLIQEIVDNSVDEVLAGYASKINITLYDD--NSIEVADDGRGMPVD 76 >gi|163735121|ref|ZP_02142557.1| C4-dicarboxylate transport sensor protein dctB [Roseobacter litoralis Och 149] gi|161391579|gb|EDQ15912.1| C4-dicarboxylate transport sensor protein dctB [Roseobacter litoralis Och 149] Length = 586 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 6/54 (11%) Query: 30 LIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N++DA + +V+ +++ G + + DNG G+ E++ + T+K Sbjct: 482 LLRNAIDATKSAAAPKVDIILSAGETATLTVRDNGPGI--EDLDALFEPFYTTK 533 >gi|270157507|ref|ZP_06186164.1| DNA topoisomerase IV B subunit [Legionella longbeachae D-4968] gi|289164107|ref|YP_003454245.1| Topoisomerase IV subunit B [Legionella longbeachae NSW150] gi|269989532|gb|EEZ95786.1| DNA topoisomerase IV B subunit [Legionella longbeachae D-4968] gi|288857280|emb|CBJ11107.1| Topoisomerase IV subunit B [Legionella longbeachae NSW150] Length = 627 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A +S + + G ++ D+G GM + Sbjct: 30 TRPNHLAQEVIDNSVDEVLAGFASHIRVTLHEDG--SIEVEDDGRGMPVD 77 >gi|304315545|ref|YP_003850690.1| DNA gyrase subunit beta [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777047|gb|ADL67606.1| DNA gyrase, B subunit [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 633 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 83/246 (33%), Gaps = 30/246 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE----------EIPMAV 72 + E+++NS+D A ++ VI + + D+G G+ ++ E+ + V Sbjct: 41 VYEIVDNSIDEALAGYCKNIDVVIHKD--NSVSVIDDGRGIPTDIHPQTGKSGVEVALTV 98 Query: 73 QRHCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSV 131 H K ++D + + G G L + A+S L ++ + + K Sbjct: 99 L-HAGGKFNNDVYKV-SGGLHGVGLSVVNALSKRLEVIVKQNGKVYEQKYERGVPKSDLK 156 Query: 132 RPVAMN-PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 + GT + ++ + + ++++ +R ++ V + Sbjct: 157 IIGDTDETGTTIT-------FAPDDEIFETLEYDYDILSQRLRELSFLNKGVRIRLMDER 209 Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQF 250 + + G E + + + + + +S T + +N Sbjct: 210 DGKEDVFHY--EGGIVEFVKYLNRNKEVLHPEPIYMESKSDTYEVEVA-MQYNDSYTENI 266 Query: 251 YVFING 256 + F N Sbjct: 267 FSFANN 272 >gi|332704005|ref|ZP_08424093.1| histidine kinase [Desulfovibrio africanus str. Walvis Bay] gi|332554154|gb|EGJ51198.1| histidine kinase [Desulfovibrio africanus str. Walvis Bay] Length = 405 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 4/59 (6%) Query: 25 IAIKELIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 + L+ N+LDA V T + G + +I D G G+ E + + T+K Sbjct: 295 QVVLNLLTNALDAIKDSGCITVRTFLERGARLCLEIRDTGCGIPPEHLDKLFEPFFTTK 353 >gi|254388740|ref|ZP_05003973.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294813352|ref|ZP_06771995.1| DNA mismatch repair enzyme [Streptomyces clavuligerus ATCC 27064] gi|326441712|ref|ZP_08216446.1| hypothetical protein SclaA2_11637 [Streptomyces clavuligerus ATCC 27064] gi|197702460|gb|EDY48272.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|294325951|gb|EFG07594.1| DNA mismatch repair enzyme [Streptomyces clavuligerus ATCC 27064] Length = 622 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 19/121 (15%) Query: 22 RPSIAIKELIENSLDAESSRVETVIAGGG----------KSFFQITDNGFGMTSEEIPMA 71 + AI ELI+N ++A + VE + + DNG GM E + + Sbjct: 24 STAHAIAELIDNGIEAGADLVELFVVESTDRPSQRSRHRVEKIAVLDNGSGMDPETLRQS 83 Query: 72 VQRHC-TSKISDDFSNIHTFGFRGEALP--SIGAVSHLTLMSRPPQNNTGAQIAISGEKI 128 ++ T I F G LP SI + + S + + ++ Sbjct: 84 LRFGAGT---RQQRKGIGRF---GVGLPNSSISQCDRVDVWSWTNGPDNALHTYLDLTEV 137 Query: 129 S 129 Sbjct: 138 R 138 >gi|121635669|ref|YP_975914.1| hypothetical protein NMC1991 [Neisseria meningitidis FAM18] gi|120867375|emb|CAM11147.1| conserved hypothetical protein [Neisseria meningitidis FAM18] Length = 560 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 26/49 (53%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 AI ELI N+ DA ++ VE + + I DNG GM+ +EI R Sbjct: 41 AIAELIANAYDACATEVEVRLFDKPEHKIVIKDNGIGMSFDEINDFYLR 89 >gi|146313079|ref|YP_001178153.1| DNA topoisomerase IV subunit B [Enterobacter sp. 638] gi|145319955|gb|ABP62102.1| DNA topoisomerase IV subunit B [Enterobacter sp. 638] Length = 630 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 72/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + R++ ++ ++ D+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHAKRIDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 88 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDGQVHNIAFENGDK 146 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP--KVSF 184 + +F S + +T +++ A+ P +++F Sbjct: 147 VQELQVIGTCGKRNTGTSVHFW----PDESFFDSPRFSVTRMTHILKAKAVLCPGVEITF 202 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 S + N E ++ + Sbjct: 203 KDEVNNSEQRWCYQDGLNDYLGEAVNGL 230 >gi|325955726|ref|YP_004286336.1| DNA gyrase subunit B [Lactobacillus acidophilus 30SC] gi|325332291|gb|ADZ06199.1| DNA gyrase subunit B [Lactobacillus acidophilus 30SC] Length = 654 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E I G + D+G G+ + Sbjct: 58 EIIDNSIDERLAGFATKIEVTINEDG--SVTVQDDGRGIPVD 97 >gi|315037235|ref|YP_004030803.1| DNA gyrase, B subunit [Lactobacillus amylovorus GRL 1112] gi|312275368|gb|ADQ58008.1| DNA gyrase, B subunit [Lactobacillus amylovorus GRL 1112] gi|327182554|gb|AEA31001.1| DNA gyrase subunit B [Lactobacillus amylovorus GRL 1118] Length = 654 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E I G + D+G G+ + Sbjct: 58 EIIDNSIDERLAGFATKIEVTINEDG--SVTVQDDGRGIPVD 97 >gi|293380895|ref|ZP_06626931.1| DNA gyrase, B subunit [Lactobacillus crispatus 214-1] gi|290922568|gb|EFD99534.1| DNA gyrase, B subunit [Lactobacillus crispatus 214-1] Length = 654 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E I G + D+G G+ + Sbjct: 58 EIIDNSIDERLAGFATKIEVTINEDG--SVTVQDDGRGIPVD 97 >gi|262046286|ref|ZP_06019249.1| DNA gyrase, B subunit [Lactobacillus crispatus MV-3A-US] gi|295691867|ref|YP_003600477.1| DNA gyrase, b subunit [Lactobacillus crispatus ST1] gi|312977114|ref|ZP_07788863.1| DNA gyrase, B subunit [Lactobacillus crispatus CTV-05] gi|260573616|gb|EEX30173.1| DNA gyrase, B subunit [Lactobacillus crispatus MV-3A-US] gi|295029973|emb|CBL49452.1| DNA gyrase, B subunit [Lactobacillus crispatus ST1] gi|310896442|gb|EFQ45507.1| DNA gyrase, B subunit [Lactobacillus crispatus CTV-05] Length = 654 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E I G + D+G G+ + Sbjct: 58 EIIDNSIDERLAGFATKIEVTINEDG--SVTVQDDGRGIPVD 97 >gi|256843827|ref|ZP_05549314.1| DNA gyrase, B subunit [Lactobacillus crispatus 125-2-CHN] gi|256613732|gb|EEU18934.1| DNA gyrase, B subunit [Lactobacillus crispatus 125-2-CHN] Length = 654 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E I G + D+G G+ + Sbjct: 58 EIIDNSIDERLAGFATKIEVTINEDG--SVTVQDDGRGIPVD 97 >gi|227877545|ref|ZP_03995605.1| DNA topoisomerase (ATP-hydrolyzing) [Lactobacillus crispatus JV-V01] gi|256849618|ref|ZP_05555050.1| subunit B [Lactobacillus crispatus MV-1A-US] gi|227862844|gb|EEJ70303.1| DNA topoisomerase (ATP-hydrolyzing) [Lactobacillus crispatus JV-V01] gi|256713734|gb|EEU28723.1| subunit B [Lactobacillus crispatus MV-1A-US] Length = 654 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E I G + D+G G+ + Sbjct: 58 EIIDNSIDERLAGFATKIEVTINEDG--SVTVQDDGRGIPVD 97 >gi|62868798|gb|AAY17585.1| DNA gyrase B subunit [Lactobacillus crispatus] Length = 483 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E I G + D+G G+ + Sbjct: 19 EIIDNSIDERLAGFATKIEVTINEDG--SVTVQDDGRGIPVD 58 >gi|332798791|ref|YP_004460290.1| integral membrane sensor signal transduction histidine kinase [Tepidanaerobacter sp. Re1] gi|332696526|gb|AEE90983.1| integral membrane sensor signal transduction histidine kinase [Tepidanaerobacter sp. Re1] Length = 436 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 28/58 (48%), Gaps = 5/58 (8%) Query: 30 LIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 L+ N+LDA + + ++D+G G+ ++++P + ++K ++D Sbjct: 319 LVSNALDAIDDKGVIEINICLDEETV-IITVSDDGKGINAKDLPYIFEPGFSTKYNED 375 >gi|254671708|emb|CBA09493.1| conserved hypothetical protein [Neisseria meningitidis alpha153] Length = 555 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 26/49 (53%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 AI ELI N+ DA ++ VE + + I DNG GM+ +EI R Sbjct: 36 AIAELIANAYDACATEVEVRLFDKPEHKIVIKDNGIGMSFDEINDFYLR 84 >gi|110679530|ref|YP_682537.1| C4-dicarboxylate transport sensor protein dctB [Roseobacter denitrificans OCh 114] gi|109455646|gb|ABG31851.1| C4-dicarboxylate transport sensor protein dctB [Roseobacter denitrificans OCh 114] Length = 567 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 6/54 (11%) Query: 30 LIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N++DA + +VE +++ G + + DNG G+ E++ + T+K Sbjct: 463 LLRNAIDATKSAAAPKVEIILSAGETATLTVRDNGPGI--EDLDALFEPFYTTK 514 >gi|330721164|gb|EGG99282.1| Topoisomerase IV subunit B [gamma proteobacterium IMCC2047] Length = 631 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 15/75 (20%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + RV+ + G ++D+G GM EE + Sbjct: 31 TRPNHLAQEVIDNSIDEAMAGFARRVDVELHNDG--SLSVSDDGRGMPVDIHPEEGVSGV 88 Query: 69 PMAVQR-HCTSKISD 82 + + R H K S+ Sbjct: 89 ELILTRLHAGGKFSN 103 >gi|288818142|ref|YP_003432490.1| histidine kinase sensor protein [Hydrogenobacter thermophilus TK-6] gi|288787542|dbj|BAI69289.1| histidine kinase sensor protein [Hydrogenobacter thermophilus TK-6] gi|308751743|gb|ADO45226.1| multi-sensor signal transduction histidine kinase [Hydrogenobacter thermophilus TK-6] Length = 634 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 31 IENSLDA--ESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTSK 79 IEN++DA + +VE + G S+ + D G G+ E++ + T+K Sbjct: 541 IENAIDASEQGQKVEIKLRREGDSYVWIVRDYGKGIADEDLSKVFEPFYTTK 592 >gi|242243251|ref|ZP_04797696.1| DNA gyrase subunit B [Staphylococcus epidermidis W23144] gi|242233200|gb|EES35512.1| DNA gyrase subunit B [Staphylococcus epidermidis W23144] gi|319399910|gb|EFV88156.1| DNA gyrase, B subunit [Staphylococcus epidermidis FRI909] Length = 643 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E +I ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYASHIEVIIEKD--NWIKVTDNGRGIPVD 89 >gi|254508345|ref|ZP_05120467.1| sensor kinase CitA [Vibrio parahaemolyticus 16] gi|219548759|gb|EED25762.1| sensor kinase CitA [Vibrio parahaemolyticus 16] Length = 516 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 7/57 (12%) Query: 30 LIENSLDAE----SSR--VETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+ +A +S V +I G +++DNG G++ + R TSK Sbjct: 413 LIDNAFEATLKNPASEKVVNVLITDAGSDLVIEVSDNGCGISDDIASTIFSRGVTSK 469 >gi|254415204|ref|ZP_05028966.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Microcoleus chthonoplastes PCC 7420] gi|196178010|gb|EDX73012.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Microcoleus chthonoplastes PCC 7420] Length = 700 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 26/151 (17%) Query: 18 EIIERPSIAIKELIENSLDAESSRVETVIAG----GGKSFFQITDNGFGMTSEEIP---M 70 E+I P I EL++NS DA++++ + GG I+DNG GM I Sbjct: 36 ELIPNPDQGIIELVKNSYDADATQCTVELINTDTTGG--SILISDNGIGMDLAAISEGWF 93 Query: 71 AVQRHCTSKIS----DDFSNI----HTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + R SK + + G L ++ S + L +RP A Sbjct: 94 VLGR---SKKAAREPTALGRLPVGDKGLGR----LAALRQGSKVQLKTRPKNEP--AVEY 144 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPA 153 ++ +V+ +P Sbjct: 145 SLTINWQDFEQASVVEDISFDVQKDMANLPQ 175 >gi|297803624|ref|XP_002869696.1| hypothetical protein ARALYDRAFT_492340 [Arabidopsis lyrata subsp. lyrata] gi|297315532|gb|EFH45955.1| hypothetical protein ARALYDRAFT_492340 [Arabidopsis lyrata subsp. lyrata] Length = 709 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 11/71 (15%) Query: 29 ELIENSLD---AESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++N+LD + ++ V+ + G I DNG GM E++ + + SK+ Sbjct: 185 ELLDNALDEVASGATYVKVDMLENKKAGNRMLLIEDNGGGMDPEKMRQCMSLGYSAKSKL 244 Query: 81 SDDFSNIHTFG 91 ++ I +G Sbjct: 245 AN---TIGQYG 252 >gi|188584649|ref|YP_001916194.1| DNA gyrase subunit B [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349336|gb|ACB83606.1| DNA gyrase subunit B [Natranaerobius thermophilus JW/NM-WN-LF] Length = 640 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + + G K ++TDNG G+ ++ P + Sbjct: 46 VHEVVDNSIDEAMAGYCDDIRIKLEPGNK--VRVTDNGRGIPVKDHPKIKKPTLEVIMTY 103 Query: 75 -HCTSKISDDFSNIH 88 H K S+D + Sbjct: 104 LHAGGKFSNDSYKVS 118 >gi|257885591|ref|ZP_05665244.1| DNA gyrase B subunit [Enterococcus faecium 1,231,501] gi|257821447|gb|EEV48577.1| DNA gyrase B subunit [Enterococcus faecium 1,231,501] Length = 648 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++ +I + + D+G G+ + Sbjct: 50 EIVDNSIDEVLAGFATKIHVIIEKD--NSITVIDDGRGIPVD 89 >gi|126179532|ref|YP_001047497.1| DNA topoisomerase VI subunit B [Methanoculleus marisnigri JR1] gi|125862326|gb|ABN57515.1| DNA topoisomerase VI, B subunit [Methanoculleus marisnigri JR1] Length = 600 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 60/192 (31%), Gaps = 45/192 (23%) Query: 27 IKELIENSLDA--ESS---RVETVIA--GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 IKE ++N+LDA E+ + I + DNG G+ E +P+ K Sbjct: 40 IKEAVDNALDACEEAEVLPDIFVGIKKVDNEVYRITVEDNGPGIVPENVPLVFG-----K 94 Query: 80 I--SDDFSNIH-TFGFRGEALPSIGAV--SHLT------LMSRPPQNNTGAQIAISGEKI 128 + F I + G +G + AV + LT ++SR + + Sbjct: 95 LLYGSRFHQIRQSRGQQGIGIS--AAVLYAQLTTGIPTLVVSRTGAKARAHRFELLIRTE 152 Query: 129 --------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 GT +E++ KS + D +R AI P Sbjct: 153 TNEPEIISHEEIDWDRTHGTRIEIQ------------FKSTLAAKKRLVDYLRLTAIVNP 200 Query: 181 KVSFTFSTIKSN 192 T Sbjct: 201 HARITADIDGEM 212 >gi|66391456|ref|YP_238981.1| DNA-dependent ATPase [Enterobacteria phage RB43] gi|62288544|gb|AAX78527.1| gp60plus39 DNA topoisomerase subunit [Enterobacteria phage RB43] Length = 630 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 10/59 (16%) Query: 18 EIIERPSIAIKELIENSLDAE-------SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 E +E I E+++NS+D ++R+E I I+DNG G+ +++ Sbjct: 64 EYVEGLVKIINEILDNSIDEAIRTDFKFANRIEVKIDHN---LVTISDNGRGIPQDDVR 119 >gi|69246710|ref|ZP_00604078.1| DNA gyrase, B subunit [Enterococcus faecium DO] gi|227550644|ref|ZP_03980693.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecium TX1330] gi|257878650|ref|ZP_05658303.1| DNA gyrase B subunit [Enterococcus faecium 1,230,933] gi|257881316|ref|ZP_05660969.1| DNA gyrase B subunit [Enterococcus faecium 1,231,502] gi|257888091|ref|ZP_05667744.1| DNA gyrase B subunit [Enterococcus faecium 1,141,733] gi|257890533|ref|ZP_05670186.1| DNA gyrase B subunit [Enterococcus faecium 1,231,410] gi|257893108|ref|ZP_05672761.1| DNA gyrase B subunit [Enterococcus faecium 1,231,408] gi|257896291|ref|ZP_05675944.1| DNA gyrase B subunit [Enterococcus faecium Com12] gi|257899275|ref|ZP_05678928.1| DNA gyrase B subunit [Enterococcus faecium Com15] gi|258615266|ref|ZP_05713036.1| DNA gyrase subunit B [Enterococcus faecium DO] gi|260558231|ref|ZP_05830427.1| DNA gyrase B subunit [Enterococcus faecium C68] gi|261206921|ref|ZP_05921610.1| DNA gyrase B subunit [Enterococcus faecium TC 6] gi|289566502|ref|ZP_06446926.1| DNA gyrase, B subunit [Enterococcus faecium D344SRF] gi|293379372|ref|ZP_06625516.1| DNA gyrase, B subunit [Enterococcus faecium PC4.1] gi|293553551|ref|ZP_06674178.1| DNA gyrase, B subunit [Enterococcus faecium E1039] gi|293563255|ref|ZP_06677707.1| DNA gyrase, B subunit [Enterococcus faecium E1162] gi|293569155|ref|ZP_06680461.1| DNA gyrase, B subunit [Enterococcus faecium E1071] gi|293572722|ref|ZP_06683686.1| DNA gyrase, B subunit [Enterococcus faecium E980] gi|294616655|ref|ZP_06696426.1| DNA gyrase, B subunit [Enterococcus faecium E1636] gi|294619749|ref|ZP_06699154.1| DNA gyrase, B subunit [Enterococcus faecium E1679] gi|294623763|ref|ZP_06702591.1| DNA gyrase, B subunit [Enterococcus faecium U0317] gi|314940127|ref|ZP_07847307.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a04] gi|314943042|ref|ZP_07849846.1| DNA gyrase, B subunit [Enterococcus faecium TX0133C] gi|314948160|ref|ZP_07851556.1| DNA gyrase, B subunit [Enterococcus faecium TX0082] gi|314953426|ref|ZP_07856344.1| DNA gyrase, B subunit [Enterococcus faecium TX0133A] gi|314993835|ref|ZP_07859171.1| DNA gyrase, B subunit [Enterococcus faecium TX0133B] gi|314998140|ref|ZP_07863022.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a01] gi|68195124|gb|EAN09583.1| DNA gyrase, B subunit [Enterococcus faecium DO] gi|227180223|gb|EEI61195.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecium TX1330] gi|257812878|gb|EEV41636.1| DNA gyrase B subunit [Enterococcus faecium 1,230,933] gi|257816974|gb|EEV44302.1| DNA gyrase B subunit [Enterococcus faecium 1,231,502] gi|257824145|gb|EEV51077.1| DNA gyrase B subunit [Enterococcus faecium 1,141,733] gi|257826893|gb|EEV53519.1| DNA gyrase B subunit [Enterococcus faecium 1,231,410] gi|257829487|gb|EEV56094.1| DNA gyrase B subunit [Enterococcus faecium 1,231,408] gi|257832856|gb|EEV59277.1| DNA gyrase B subunit [Enterococcus faecium Com12] gi|257837187|gb|EEV62261.1| DNA gyrase B subunit [Enterococcus faecium Com15] gi|260075405|gb|EEW63711.1| DNA gyrase B subunit [Enterococcus faecium C68] gi|260078549|gb|EEW66251.1| DNA gyrase B subunit [Enterococcus faecium TC 6] gi|289161711|gb|EFD09587.1| DNA gyrase, B subunit [Enterococcus faecium D344SRF] gi|291588124|gb|EFF19966.1| DNA gyrase, B subunit [Enterococcus faecium E1071] gi|291590475|gb|EFF22213.1| DNA gyrase, B subunit [Enterococcus faecium E1636] gi|291594019|gb|EFF25488.1| DNA gyrase, B subunit [Enterococcus faecium E1679] gi|291596717|gb|EFF27940.1| DNA gyrase, B subunit [Enterococcus faecium U0317] gi|291602306|gb|EFF32531.1| DNA gyrase, B subunit [Enterococcus faecium E1039] gi|291604794|gb|EFF34276.1| DNA gyrase, B subunit [Enterococcus faecium E1162] gi|291607214|gb|EFF36572.1| DNA gyrase, B subunit [Enterococcus faecium E980] gi|292641895|gb|EFF60061.1| DNA gyrase, B subunit [Enterococcus faecium PC4.1] gi|313587852|gb|EFR66697.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a01] gi|313591726|gb|EFR70571.1| DNA gyrase, B subunit [Enterococcus faecium TX0133B] gi|313594529|gb|EFR73374.1| DNA gyrase, B subunit [Enterococcus faecium TX0133A] gi|313598242|gb|EFR77087.1| DNA gyrase, B subunit [Enterococcus faecium TX0133C] gi|313640632|gb|EFS05212.1| DNA gyrase, B subunit [Enterococcus faecium TX0133a04] gi|313645414|gb|EFS09994.1| DNA gyrase, B subunit [Enterococcus faecium TX0082] Length = 648 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++ +I + + D+G G+ + Sbjct: 50 EIVDNSIDEVLAGFATKIHVIIEKD--NSITVIDDGRGIPVD 89 >gi|160941018|ref|ZP_02088357.1| hypothetical protein CLOBOL_05912 [Clostridium bolteae ATCC BAA-613] gi|158436108|gb|EDP13875.1| hypothetical protein CLOBOL_05912 [Clostridium bolteae ATCC BAA-613] Length = 346 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 3/66 (4%) Query: 26 AIKELIENSLD--AESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 A+ L++N+LD + S V I DNG G+ E++ +R S+ S Sbjct: 242 AVSNLVKNALDHTEKGSFVRIEWQAFASVVQITIKDNGCGIHPEDLHHIFKRFYRSRFSK 301 Query: 83 DFSNIH 88 D I Sbjct: 302 DTQGIG 307 >gi|258546265|ref|ZP_05706499.1| DNA gyrase subunit B [Cardiobacterium hominis ATCC 15826] gi|258518531|gb|EEV87390.1| DNA gyrase subunit B [Cardiobacterium hominis ATCC 15826] Length = 800 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 88/281 (31%), Gaps = 34/281 (12%) Query: 2 KIRKLSEKIINQIAAGEIIER------PSIAIKELIENSLD---AE-SSRVETVIAGGGK 51 +IR L +I G I + E+++N++D A + + +I Sbjct: 11 RIRVLKGLEAVRIRPGMYIGNTDDGSGLHHMVFEVVDNAIDEALAGYCTEINVIIHQD-- 68 Query: 52 SFFQITDNGFGMT----SEEIPMAVQ-----RHCTSKISDDFSNIHTFGFRGEALPSIGA 102 + DNG G+ EE A + H K D+ + + G G + + A Sbjct: 69 ESITVRDNGRGIPVDIHPEEGRSAAEVIMTVLHAGGKFDDNAYKV-SGGLHGVGVSVVNA 127 Query: 103 VS-HLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNP-GTIVEVRDLFFTIPARLNFLKS 160 +S LT+ ++ Q + + + + T E+ A + + Sbjct: 128 LSERLTMT--IKRDGHIHQQTYRHGEPQAPLAIIGDSDSTGTEI-----NFLASSDTFGT 180 Query: 161 EQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 + + + +R ++ V +S++ ++ + Sbjct: 181 VIYDYDTLAQRLRELSFLNAGVRIELRDERSDKNQIFQYEGGVKAFVEYQNRNKTPIHPS 240 Query: 221 AVELNEKSNEITLQGYTGIPTFNRGNANQFYVFINGRTVQD 261 + + ++ +N A Y F N +D Sbjct: 241 IFYCAADKDGVAVEIAL---QWNDSYAENVYCFTNNIPQRD 278 >gi|240146837|ref|ZP_04745438.1| putative heat shock protein [Roseburia intestinalis L1-82] gi|257201023|gb|EEU99307.1| putative heat shock protein [Roseburia intestinalis L1-82] gi|291534423|emb|CBL07535.1| Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [Roseburia intestinalis M50/1] Length = 771 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Query: 26 AIKELIENSLDAESSRVETVIAGGGK--SFFQITDNGFGMTSEEIP 69 A+ EL++N+ DA + RV+ + S I D+G GM +I Sbjct: 32 AVFELVKNAYDAGAKRVDIIFENVNTLNSKLIIKDDGKGMDLPDIR 77 >gi|47225232|emb|CAG09732.1| unnamed protein product [Tetraodon nigroviridis] Length = 514 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 9/79 (11%) Query: 23 PSIAIKELIENSLDAE--SSR--VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT- 77 P A+ EL++N+ D + + ++ + G+ TDNG GMT ++ + T Sbjct: 14 PFSAVAELVDNASDPGVCAKQMWIDV-VEEEGQLCLTFTDNGCGMTPNKLHKMLSFGFTE 72 Query: 78 ---SKISDDFSNIHTFGFR 93 SK+S ++ GF+ Sbjct: 73 KGSSKVSQQAIGLYGNGFK 91 >gi|229818508|ref|YP_002880034.1| DNA gyrase, B subunit [Beutenbergia cavernae DSM 12333] gi|229564421|gb|ACQ78272.1| DNA gyrase, B subunit [Beutenbergia cavernae DSM 12333] Length = 685 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 26/45 (57%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A ++R++ + GG ++ D+G G+ + Sbjct: 56 VSEVVDNSVDEALAGYATRIDVTLTEDGG---VRVVDDGRGIPVD 97 >gi|206895598|ref|YP_002246982.1| DNA gyrase, B subunit [Coprothermobacter proteolyticus DSM 5265] gi|206738215|gb|ACI17293.1| DNA gyrase, B subunit [Coprothermobacter proteolyticus DSM 5265] Length = 637 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 69/197 (35%), Gaps = 20/197 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EIPMAVQR-H 75 E+++N++D A ++ V+ G + DNG G+ E + + + + H Sbjct: 46 EIVDNAIDEAMAGFCDHIKVVLYKDG--SVLVEDNGRGIPVEIHPQEGRPTVEVVLTKLH 103 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K + G G L + A+S L + + Q G+ ++ V+ + Sbjct: 104 AGGKFGGQAYK-ASGGLHGVGLSVVNALSEWLEITVK-RDGTVYWQRYEFGKPVTEVKEI 161 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 T + F + + + +I +R +A +V+ S Sbjct: 162 GQYDDTESSATIVQFK--PDKSIFADTRFDYEVIRQRLRELAFLNSEVTIELQREGSEPE 219 Query: 195 KMNFQSTNGNFPERISQ 211 +F+S E ++ Sbjct: 220 FFHFESGLAGLLEEVAN 236 >gi|304320769|ref|YP_003854412.1| putative ATPase [Parvularcula bermudensis HTCC2503] gi|303299671|gb|ADM09270.1| putative ATPase [Parvularcula bermudensis HTCC2503] Length = 1418 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 78/227 (34%), Gaps = 11/227 (4%) Query: 20 IERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 ++ P I EL++N+ DA ++ I G F NG T E + ++K Sbjct: 39 VQSPRHIISELLQNADDAHATEASVDIQDGSFLFSH---NGEDFTEEHFASLCKFGYSNK 95 Query: 80 ISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNP 138 +HT GFRG S ++ + L + + +++ Sbjct: 96 -----RALHTIGFRGIGFKSTFSLGERVELYTPTLSVGFDQKRFTEPFWMNNGSVNRDRT 150 Query: 139 GTIVEVRDLFFTIPARLNFLK-SEQVETNLITDVIRRMAIAYPKVSFTFSTIKS-NRYKM 196 V + D R N + + + L IRR+ I +V + + + Sbjct: 151 TVRVSISDEHRETEVRKNLEEWLKSPVSLLFFRNIRRITIGGKEVHWGSFGDGPVDGTEW 210 Query: 197 NFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFN 243 N + +++ EDF +A+ + + + +P + Sbjct: 211 LALQENPDKQFLLARSAPEDFPEDALREIRQERMVGAEQNMALPPCH 257 >gi|329666396|gb|AEB92344.1| DNA gyrase subunit B [Lactobacillus johnsonii DPC 6026] Length = 655 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E + G + D+G G+ + Sbjct: 59 EIIDNSIDERLAGFATKIEITVNEDG--SVTVQDDGRGIPVD 98 >gi|323465562|gb|ADX69249.1| DNA gyrase subunit B [Lactobacillus helveticus H10] Length = 613 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E + G + D+G G+ + Sbjct: 17 EIIDNSIDERLAGFATKIEITVNEDG--SVTVQDDGRGIPVD 56 >gi|295425411|ref|ZP_06818109.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus amylolyticus DSM 11664] gi|295064913|gb|EFG55823.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus amylolyticus DSM 11664] Length = 653 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E + G + D+G G+ + Sbjct: 57 EIIDNSIDERLAGFATKIEITVNEDG--SVTVQDDGRGIPVD 96 >gi|260101874|ref|ZP_05752111.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus helveticus DSM 20075] gi|260084302|gb|EEW68422.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus helveticus DSM 20075] gi|328468764|gb|EGF39735.1| DNA gyrase subunit B [Lactobacillus helveticus MTCC 5463] Length = 654 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E + G + D+G G+ + Sbjct: 58 EIIDNSIDERLAGFATKIEITVNEDG--SVTVQDDGRGIPVD 97 >gi|227889153|ref|ZP_04006958.1| DNA topoisomerase (ATP-hydrolyzing) [Lactobacillus johnsonii ATCC 33200] gi|268318566|ref|YP_003292222.1| DNA gyrase, subunit B [Lactobacillus johnsonii FI9785] gi|227850382|gb|EEJ60468.1| DNA topoisomerase (ATP-hydrolyzing) [Lactobacillus johnsonii ATCC 33200] gi|262396941|emb|CAX65955.1| DNA gyrase, subunit B [Lactobacillus johnsonii FI9785] Length = 655 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E + G + D+G G+ + Sbjct: 59 EIIDNSIDERLAGFATKIEITVNEDG--SVTVQDDGRGIPVD 98 >gi|300362674|ref|ZP_07058850.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus gasseri JV-V03] gi|300353665|gb|EFJ69537.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus gasseri JV-V03] Length = 655 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E + G + D+G G+ + Sbjct: 59 EIIDNSIDERLAGFATKIEITVNEDG--SVTVQDDGRGIPVD 98 >gi|161506639|ref|YP_001576587.1| DNA gyrase [Lactobacillus helveticus DPC 4571] gi|160347628|gb|ABX26302.1| DNA gyrase [Lactobacillus helveticus DPC 4571] Length = 654 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E + G + D+G G+ + Sbjct: 58 EIIDNSIDERLAGFATKIEITVNEDG--SVTVQDDGRGIPVD 97 >gi|42518089|ref|NP_964019.1| DNA gyrase subunit B [Lactobacillus johnsonii NCC 533] gi|41582373|gb|AAS07985.1| DNA gyrase subunit B [Lactobacillus johnsonii NCC 533] Length = 655 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E + G + D+G G+ + Sbjct: 59 EIIDNSIDERLAGFATKIEITVNEDG--SVTVQDDGRGIPVD 98 >gi|116628688|ref|YP_813860.1| DNA gyrase, B subunit [Lactobacillus gasseri ATCC 33323] gi|238853343|ref|ZP_04643723.1| DNA gyrase, B subunit [Lactobacillus gasseri 202-4] gi|282852320|ref|ZP_06261662.1| DNA gyrase, B subunit [Lactobacillus gasseri 224-1] gi|311111572|ref|ZP_07712969.1| DNA gyrase, B subunit [Lactobacillus gasseri MV-22] gi|116094270|gb|ABJ59422.1| DNA gyrase subunit B [Lactobacillus gasseri ATCC 33323] gi|238834031|gb|EEQ26288.1| DNA gyrase, B subunit [Lactobacillus gasseri 202-4] gi|282556062|gb|EFB61682.1| DNA gyrase, B subunit [Lactobacillus gasseri 224-1] gi|311066726|gb|EFQ47066.1| DNA gyrase, B subunit [Lactobacillus gasseri MV-22] Length = 655 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E + G + D+G G+ + Sbjct: 59 EIIDNSIDERLAGFATKIEITVNEDG--SVTVQDDGRGIPVD 98 >gi|322411454|gb|EFY02362.1| DNA gyrase subunit B [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 650 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ ++ I + + DNG G+ + Sbjct: 51 EIVDNSIDEALAGFATHIQVFIEAD--NSITVVDNGRGIPVD 90 >gi|251782113|ref|YP_002996415.1| DNA gyrase subunit B [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390742|dbj|BAH81201.1| DNA gyrase subunit B [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 650 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ ++ I + + DNG G+ + Sbjct: 51 EIVDNSIDEALAGFATHIQVFIEAD--NSITVVDNGRGIPVD 90 >gi|156888541|gb|ABU96675.1| DNA gyrase subunit B [Streptococcus dysgalactiae subsp. equisimilis] gi|156888543|gb|ABU96676.1| DNA gyrase subunit B [Streptococcus dysgalactiae subsp. equisimilis] gi|156888545|gb|ABU96677.1| DNA gyrase subunit B [Streptococcus dysgalactiae subsp. equisimilis] Length = 621 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ ++ I + + DNG G+ + Sbjct: 51 EIVDNSIDEALAGFATHIQVFIEAD--NSITVVDNGRGIPVD 90 >gi|156888537|gb|ABU96673.1| DNA gyrase subunit B [Streptococcus dysgalactiae subsp. equisimilis] Length = 621 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ ++ I + + DNG G+ + Sbjct: 51 EIVDNSIDEALAGFATHIQVFIEAD--NSITVVDNGRGIPVD 90 >gi|156888535|gb|ABU96672.1| DNA gyrase subunit B [Streptococcus dysgalactiae subsp. equisimilis] gi|156888539|gb|ABU96674.1| DNA gyrase subunit B [Streptococcus dysgalactiae subsp. equisimilis] Length = 621 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ ++ I + + DNG G+ + Sbjct: 51 EIVDNSIDEALAGFATHIQVFIEAD--NSITVVDNGRGIPVD 90 >gi|312142414|ref|YP_003993860.1| DNA gyrase, B subunit [Halanaerobium sp. 'sapolanicus'] gi|311903065|gb|ADQ13506.1| DNA gyrase, B subunit [Halanaerobium sp. 'sapolanicus'] Length = 640 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 6/54 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 E + E+++NS+D A + + I G ++ DNG G+ E P Sbjct: 37 EGLHHLVYEVVDNSIDEAMAGYCTEIIVEIQPGNI--IKVKDNGRGIPVENHPK 88 >gi|307609486|emb|CBW98983.1| topoisomerase IV subunit B [Legionella pneumophila 130b] Length = 626 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A +SR+ + G ++ D+G GM + Sbjct: 30 TRPNHLAQEVIDNSVDEVLAGFASRIIVTLHEDG--SIEVEDDGRGMPVD 77 >gi|296106278|ref|YP_003617978.1| DNA topoisomerase IV subunit B [Legionella pneumophila 2300/99 Alcoy] gi|295648179|gb|ADG24026.1| DNA topoisomerase IV subunit B [Legionella pneumophila 2300/99 Alcoy] Length = 626 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A +SR+ + G ++ D+G GM + Sbjct: 30 TRPNHLAQEVIDNSVDEVLAGFASRIIVTLHEDG--SIEVEDDGRGMPVD 77 >gi|169827295|ref|YP_001697453.1| sensor protein [Lysinibacillus sphaericus C3-41] gi|168991783|gb|ACA39323.1| Sensor protein [Lysinibacillus sphaericus C3-41] Length = 561 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 9/84 (10%) Query: 21 ERPSIAIKELIENSL---DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 +R + L++N+L D S V+ + + D G G+ +++P +R Sbjct: 454 DRIEQVLTNLVDNALRHTDEGSVTVKVE-KEPTFAKISVQDTGHGIPQDDLPYVFERFY- 511 Query: 78 SKISDDFSNIHTFGFRGEALPSIG 101 D + + G G L I Sbjct: 512 ---KADKARTRSKGGTGLGLA-IA 531 >gi|9971917|gb|AAG10479.1|AF279106_41 predicted topoisomerase IV subunit B [uncultured marine gamma proteobacterium EBAC31A08] Length = 631 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 84/213 (39%), Gaps = 29/213 (13%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP-------- 69 P+ I+E+++NS+D + S ++ + G F +++D+G GM +E P Sbjct: 32 NPNHLIQEVLDNSVDEALSGYCSNIKVSVLKDG--FIKVSDDGRGMPIDEHPEHKVSGVE 89 Query: 70 -MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKI 128 + + H +K S D N + G G + + A+S L R +++ QI + Sbjct: 90 LILCKLHAGAKFSGDDYN-FSGGLHGVGVSVVNALSD-ELEVRVKRDSKEYQITFNNGDK 147 Query: 129 SSVRPVAM-----NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 SS N GT ++ F P ++ + + +++ A+ P ++ Sbjct: 148 SSELKPIGEVGLRNSGTSIK----FKPNPTYFETIEIQIKQLKH---LLKAKAVLCPGLT 200 Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQVIGED 216 F K K + +G I G D Sbjct: 201 IEFVNEKKTDDKQKWYFEDGLKSYLIDSSEGAD 233 >gi|52840928|ref|YP_094727.1| DNA topoisomerase IV subunit B [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628039|gb|AAU26780.1| DNA topoisomerase IV subunit B [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 626 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A +SR+ + G ++ D+G GM + Sbjct: 30 TRPNHLAQEVIDNSVDEVLAGFASRIIVTLHEDG--SIEVEDDGRGMPVD 77 >gi|54293674|ref|YP_126089.1| DNA topoisomerase IV subunit B [Legionella pneumophila str. Lens] gi|53753506|emb|CAH14961.1| Topoisomerase IV subunit B [Legionella pneumophila str. Lens] Length = 626 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A +SR+ + G ++ D+G GM + Sbjct: 30 TRPNHLAQEVIDNSVDEVLAGFASRIIVTLHEDG--SIEVEDDGRGMPVD 77 >gi|54296715|ref|YP_123084.1| DNA topoisomerase IV subunit B [Legionella pneumophila str. Paris] gi|148360657|ref|YP_001251864.1| DNA topoisomerase IV subunit B [Legionella pneumophila str. Corby] gi|53750500|emb|CAH11894.1| Topoisomerase IV subunit B [Legionella pneumophila str. Paris] gi|148282430|gb|ABQ56518.1| DNA topoisomerase IV subunit B [Legionella pneumophila str. Corby] Length = 626 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A +SR+ + G ++ D+G GM + Sbjct: 30 TRPNHLAQEVIDNSVDEVLAGFASRIIVTLHEDG--SIEVEDDGRGMPVD 77 >gi|89069857|ref|ZP_01157191.1| C4-dicarboxylate transport sensor protein DctB, putative [Oceanicola granulosus HTCC2516] gi|89044533|gb|EAR50652.1| C4-dicarboxylate transport sensor protein DctB, putative [Oceanicola granulosus HTCC2516] Length = 569 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 10/64 (15%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R I L+ N+LDA ++ ++ ++A G + DNG G+ E++ + Sbjct: 457 RLEQVIINLLRNALDA--TKSAEDPQIDILLAAGETVRLTVRDNGPGI--EDLDALFEPF 512 Query: 76 CTSK 79 T+K Sbjct: 513 YTTK 516 >gi|117919787|ref|YP_868979.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella sp. ANA-3] gi|117612119|gb|ABK47573.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella sp. ANA-3] Length = 360 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 S A+ L+ NSL+A +++++ V + + + DNG G+ ++ ++ T+K Sbjct: 249 LSSAVNNLVMNSLEAGATQIQIVASDSNEQLHLNVIDNGKGLDAKMQQKVLEPFFTTK 306 >gi|302871903|ref|YP_003840539.1| histidine kinase [Caldicellulosiruptor obsidiansis OB47] gi|302574762|gb|ADL42553.1| histidine kinase [Caldicellulosiruptor obsidiansis OB47] Length = 185 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Query: 30 LIENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCT 77 L++NS++A +S V+ IA K I DNG G+ + I T Sbjct: 11 LVQNSIEAGASLVKIKIAEDLKEDLFTITIEDNGRGIPQDVIDKVTDPFYT 61 >gi|325676389|ref|ZP_08156068.1| chaperone HtpG [Rhodococcus equi ATCC 33707] gi|325552950|gb|EGD22633.1| chaperone HtpG [Rhodococcus equi ATCC 33707] Length = 650 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 82/266 (30%), Gaps = 49/266 (18%) Query: 27 IKELIENSLDA--------------ESSR----VETVIAGGGKSFFQITDNGFGMTSEEI 68 ++EL+ N+ DA E+ +E + ++ + DNG GM+ +E+ Sbjct: 33 LRELVSNASDALDKLKLEAYRDKDLEADTSDLHIELEVDADTRTL-TVRDNGIGMSRDEV 91 Query: 69 PMAVQRHCTS-------KISDDFSNIHT--------FGFRGEALPSIGAVS-HLTLMSRP 112 + S K+ + + GF S V+ +TL++R Sbjct: 92 IDLIGTLAKSGTAELRRKLREAKDAAASEELIGQFGIGF-----YSTFMVADKVTLLTRK 146 Query: 113 PQNNTGAQIAISGEKISSVRPV-AMNPGTIVE-------VRDLFFTIPARLNFLKSEQVE 164 G + SG+ ++ V GT V V D + + + + Sbjct: 147 AGEKHGTRWESSGDATYTIETVDDAPQGTSVTLHLKPEDVEDHLYDYASERKLREIVKRY 206 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL 224 ++ I + RM + P + + T + ++ E + E Sbjct: 207 SDFIAYPV-RMQVERPAPKTDDDADDAAPKTVVETETLNSMKALWARPRSEVTDDEYNEF 265 Query: 225 NEKSNEITLQGYTGIPTFNRGNANQF 250 + + IP G Sbjct: 266 YKHVSHSWDDPLEVIPMKAEGTFEYQ 291 >gi|226315215|ref|YP_002775111.1| two-component sensor histidine kinase [Brevibacillus brevis NBRC 100599] gi|226098165|dbj|BAH46607.1| two-component sensor histidine kinase [Brevibacillus brevis NBRC 100599] Length = 518 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 30 LIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 L+ NS A ++++ + ITDNG G+ E+P +R+ Sbjct: 418 LLGNSAAANATQINIGVHNPSDFLSIDITDNGKGIPESEVPFIFERYY 465 >gi|225174724|ref|ZP_03728722.1| integral membrane sensor signal transduction histidine kinase [Dethiobacter alkaliphilus AHT 1] gi|225169851|gb|EEG78647.1| integral membrane sensor signal transduction histidine kinase [Dethiobacter alkaliphilus AHT 1] Length = 530 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 6/61 (9%) Query: 20 IERPSIAIKELIENSLDAESSR---VETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRH 75 ++R I+ L++N++ ++++ ++ + K I DNG G+ +E+P R Sbjct: 416 VDRMEQIIRNLLKNAI--KATKDGTIKVGVEEQQKQVILTIADNGIGIPPDELPHIWDRF 473 Query: 76 C 76 Sbjct: 474 Y 474 >gi|94987227|ref|YP_595160.1| Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Lawsonia intracellularis PHE/MN1-00] gi|94731476|emb|CAJ54839.1| Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Lawsonia intracellularis PHE/MN1-00] Length = 799 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 17/97 (17%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGM-----TSEEIPMA----VQ 73 + E+I+NS+D A +R++ V+ + + DNG G+ E +P + Sbjct: 46 VYEVIDNSIDEAMAGFCTRIDVVLHLD--NSITVRDNGRGIPVDIHPKEGVPAVQVVMTK 103 Query: 74 RHCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLM 109 H K +D + + G G L + A+S L + Sbjct: 104 LHAGGKFDNDTYKV-SGGLHGVGLSCVNALSEQLEVT 139 >gi|54303598|ref|YP_133591.1| hypothetical protein PBPRB1944 [Photobacterium profundum SS9] gi|46917029|emb|CAG23791.1| hypothetical protein PBPRB1944 [Photobacterium profundum SS9] Length = 322 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 5/65 (7%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + LI N++DA + ++ + + DNG G+ +E+I Sbjct: 214 RLEQVLVNLISNAIDAVEHNPAPQIIITVGESLSMVQIIVKDNGAGIPAEDILHIFDPFY 273 Query: 77 TSKIS 81 T K+S Sbjct: 274 TRKVS 278 >gi|325273381|ref|ZP_08139641.1| integral membrane sensor signal transduction histidine kinase [Pseudomonas sp. TJI-51] gi|324101484|gb|EGB99070.1| integral membrane sensor signal transduction histidine kinase [Pseudomonas sp. TJI-51] Length = 276 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAES----SRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + R+E I G + + D+G G+ ++ Sbjct: 164 RLEQVLINLLRNALDAMADKRYKRLEIRIEADGARWRLSVLDSGGGIAEADLAKVFDPFF 223 Query: 77 TSK 79 T+K Sbjct: 224 TTK 226 >gi|229587582|ref|YP_002869701.1| DNA gyrase subunit B [Pseudomonas fluorescens SBW25] gi|229359448|emb|CAY46289.1| DNA gyrase subunit B [Pseudomonas fluorescens SBW25] Length = 805 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 76/246 (30%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S +++ Q + G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEELILTVRRSGKIWEQTYVHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ K+ +++ IR ++ V +S + + Sbjct: 161 DSESTGTQIH-----FKPSAETFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V E + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTAVNQVFHFNIQREDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|84997968|ref|XP_953705.1| hypothetical protein [Theileria annulata] gi|65304702|emb|CAI73027.1| hypothetical protein TA16155 [Theileria annulata] Length = 329 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 10/71 (14%) Query: 28 KELIENSLDA-----ESSRVETVIAGGGKSFFQIT--DNGFGMTSEEIPMAVQRHCTSKI 80 KELIEN++DA + +++ + +I D+G G+ I +SK Sbjct: 28 KELIENAIDACKDEQKEHKIKLQLKKN-DDVIEIQCFDDGSGINPNSIESIGHIFNSSK- 85 Query: 81 SDDFSNIHTFG 91 D TFG Sbjct: 86 -SDQETSGTFG 95 >gi|120402832|ref|YP_952661.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium vanbaalenii PYR-1] gi|119955650|gb|ABM12655.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium vanbaalenii PYR-1] Length = 395 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 21 ERPSIAIKELIENSL---DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 +R + + L++N+L A RVE G ++ DNG G+ +E +P +R Sbjct: 269 QRLAQVVGNLVDNALRHTPAG-GRVEVSWEREGAELALRVADNGAGIAAEHLPRLFERFY 327 >gi|75677095|ref|YP_319516.1| Signal transduction histidine kinase [Nitrobacter winogradskyi Nb-255] gi|74421965|gb|ABA06164.1| signal transduction histidine kinase [Nitrobacter winogradskyi Nb-255] Length = 456 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 10/51 (19%) Query: 30 LIENSL-----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 L+EN+L D + ++ VI+ G + DNG G+ + + QR Sbjct: 359 LVENALHHTPED---TTIQIVISADG--SISVIDNGDGVPVADRKLVFQRF 404 >gi|302340164|ref|YP_003805370.1| histidine kinase [Spirochaeta smaragdinae DSM 11293] gi|301637349|gb|ADK82776.1| histidine kinase [Spirochaeta smaragdinae DSM 11293] Length = 183 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 30 LIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMA 71 L++NS++A++S +E + + DNG GM+ +E+ A Sbjct: 12 LVQNSIEAKASLIELSFDEDERQIAVTLRDNGCGMSKQELERA 54 >gi|77818870|gb|ABB04019.1| rhabdomyosarcoma antigen MU-RMS-40.10B [Homo sapiens] Length = 584 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 48/267 (17%), Positives = 98/267 (36%), Gaps = 28/267 (10%) Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDFINNA--VELNEKSNEITLQGYTGIPTF-----N 243 ++ +++ +S + + V+G +NN + + + ++I L G+ + Sbjct: 31 NHPGQISQKSKVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFLPKCDADHSFTS 90 Query: 244 RGNANQFYVFINGRTVQDKFILSTIRTAYAETI---PLGRYPVVVLLLEIDPRQVDVNVH 300 + ++FIN R V K IL IR Y YPV L +++ VDVN+ Sbjct: 91 LSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLT 150 Query: 301 PAKSYIRFRNPTIIRNFIIQSIQKAI-----------NKKGISTSSVLSKKMISS---FH 346 P KS + +N + + + NK +S + ++ K + F+ Sbjct: 151 PDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTDVSAADIVLSKTAETDVLFN 210 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSD----DPTYSEDNDPVEESEAT 402 + + + TS+ Q + E+ +T+D L D Y + + + Sbjct: 211 KVESSGKNYSNVDTSVIPFQNDMHNDESGKNTDDCLNHQISIGDFGYGHCSSEISNIDKN 270 Query: 403 HYQLGIACAQIHQNYIISQTTDGLVIV 429 + + ++ SQT Sbjct: 271 TKNAFQDISMSNVSWENSQTEYSKTCF 297 >gi|254247104|ref|ZP_04940425.1| Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Burkholderia cenocepacia PC184] gi|124871880|gb|EAY63596.1| Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Burkholderia cenocepacia PC184] Length = 669 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 20/91 (21%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + +E IA + ++ DNG G+ + +P + Sbjct: 549 RLEQVLINLLGNALDAVAGVAAPAIEVTIAVSAATLALEVRDNGSGIAPDLLPRLFEPFF 608 Query: 77 TSKISDDFSNIHTFGFRGEAL-----PSIGA 102 T+K G RG L SI + Sbjct: 609 TTK---------EMG-RGLGLGLAISSSIAS 629 >gi|332685540|ref|YP_004455314.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311] gi|332369549|dbj|BAK20505.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311] Length = 643 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ + I + + D+G G+ + Sbjct: 45 EIVDNSIDEALAGFATEIRVTIEKD--NSITVVDDGRGIPVD 84 >gi|332685539|ref|YP_004455313.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311] gi|332369548|dbj|BAK20504.1| DNA gyrase subunit B [Melissococcus plutonius ATCC 35311] Length = 650 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ + I + + D+G G+ + Sbjct: 52 EIVDNSIDEALAGFATEIRVTIEKD--NSITVVDDGRGIPVD 91 >gi|322392250|ref|ZP_08065711.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus peroris ATCC 700780] gi|321144785|gb|EFX40185.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus peroris ATCC 700780] Length = 648 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIEVFIEPD--DSITVIDDGRGIPVD 88 >gi|322388186|ref|ZP_08061790.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus infantis ATCC 700779] gi|321140858|gb|EFX36359.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus infantis ATCC 700779] Length = 648 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIEVFIEPD--DSITVIDDGRGIPVD 88 >gi|212634364|ref|YP_002310889.1| ATPase-like histidine kinase A [Shewanella piezotolerans WP3] gi|212555848|gb|ACJ28302.1| ATP-binding region, ATPase-like:Histidine kinase A [Shewanella piezotolerans WP3] Length = 359 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 S AI L+ NS++A ++++ + + DNG G+ S+ ++ T+K Sbjct: 249 LSSAINNLVVNSIEAGATKIVIKTYDTATALHIDVIDNGKGLDSDMQQQVLEPFFTTK 306 >gi|170742474|ref|YP_001771129.1| DNA topoisomerase IV subunit B [Methylobacterium sp. 4-46] gi|168196748|gb|ACA18695.1| DNA topoisomerase IV, B subunit [Methylobacterium sp. 4-46] Length = 682 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++ +E + GG +TDNG G+ + Sbjct: 77 EVIDNSMDEAVAGHATFIEVELEEGGI--LSVTDNGRGIPVD 116 >gi|148266452|ref|YP_001245395.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus JH9] gi|150392485|ref|YP_001315160.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus JH1] gi|147739521|gb|ABQ47819.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus JH9] gi|149944937|gb|ABR50873.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus JH1] Length = 640 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 46 EIVDNSIDEALAGYANKIEVVIEKD--NWIKVTDNGRGIPVD 85 >gi|153085|gb|AAA73951.1| DNA gyrase B subunit [Staphylococcus aureus] Length = 640 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 48 EIVDNSIDEALAGYANKIEVVIEKD--NWIKVTDNGRGIPVD 87 >gi|15922995|ref|NP_370529.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu50] gi|15925710|ref|NP_373243.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus N315] gi|156978336|ref|YP_001440595.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu3] gi|253316843|ref|ZP_04840056.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253730404|ref|ZP_04864569.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|254663939|ref|ZP_05143411.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793543|ref|ZP_05642522.1| DNA gyrase, B subunit [Staphylococcus aureus A9781] gi|258411151|ref|ZP_05681430.1| DNA gyrase subunit B [Staphylococcus aureus A9763] gi|258420945|ref|ZP_05683879.1| DNA gyrase, B subunit [Staphylococcus aureus A9719] gi|258438584|ref|ZP_05689807.1| hypothetical protein SAKG_01059 [Staphylococcus aureus A9299] gi|258443960|ref|ZP_05692298.1| hypothetical protein SAJG_01378 [Staphylococcus aureus A8115] gi|258446224|ref|ZP_05694384.1| DNA gyrase, B subunit [Staphylococcus aureus A6300] gi|258449117|ref|ZP_05697223.1| DNA gyrase, B subunit [Staphylococcus aureus A6224] gi|258454405|ref|ZP_05702373.1| DNA gyrase, B subunit [Staphylococcus aureus A5937] gi|269201695|ref|YP_003280964.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ED98] gi|282894284|ref|ZP_06302514.1| DNA gyrase, B subunit [Staphylococcus aureus A8117] gi|282927755|ref|ZP_06335369.1| DNA gyrase, B subunit [Staphylococcus aureus A10102] gi|295406869|ref|ZP_06816673.1| hypothetical protein SMAG_02042 [Staphylococcus aureus A8819] gi|296275682|ref|ZP_06858189.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MR1] gi|297245904|ref|ZP_06929766.1| hypothetical protein SLAG_01998 [Staphylococcus aureus A8796] gi|54037243|sp|P66937|GYRB_STAAN RecName: Full=DNA gyrase subunit B gi|54041556|sp|P66936|GYRB_STAAM RecName: Full=DNA gyrase subunit B gi|13699922|dbj|BAB41221.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus N315] gi|14245772|dbj|BAB56167.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu50] gi|156720471|dbj|BAF76888.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Mu3] gi|253725884|gb|EES94613.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257787515|gb|EEV25855.1| DNA gyrase, B subunit [Staphylococcus aureus A9781] gi|257840036|gb|EEV64501.1| DNA gyrase subunit B [Staphylococcus aureus A9763] gi|257843135|gb|EEV67550.1| DNA gyrase, B subunit [Staphylococcus aureus A9719] gi|257848143|gb|EEV72135.1| hypothetical protein SAKG_01059 [Staphylococcus aureus A9299] gi|257850844|gb|EEV74788.1| hypothetical protein SAJG_01378 [Staphylococcus aureus A8115] gi|257855050|gb|EEV77993.1| DNA gyrase, B subunit [Staphylococcus aureus A6300] gi|257857550|gb|EEV80445.1| DNA gyrase, B subunit [Staphylococcus aureus A6224] gi|257863499|gb|EEV86259.1| DNA gyrase, B subunit [Staphylococcus aureus A5937] gi|262073985|gb|ACY09958.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ED98] gi|282590515|gb|EFB95593.1| DNA gyrase, B subunit [Staphylococcus aureus A10102] gi|282763329|gb|EFC03459.1| DNA gyrase, B subunit [Staphylococcus aureus A8117] gi|285815732|gb|ADC36219.1| DNA gyrase subunit B [Staphylococcus aureus 04-02981] gi|294968334|gb|EFG44359.1| hypothetical protein SMAG_02042 [Staphylococcus aureus A8819] gi|297177269|gb|EFH36522.1| hypothetical protein SLAG_01998 [Staphylococcus aureus A8796] gi|312828568|emb|CBX33410.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129548|gb|EFT85540.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus CGS03] gi|329725845|gb|EGG62324.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21172] gi|329732607|gb|EGG68957.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21193] Length = 644 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYANKIEVVIEKD--NWIKVTDNGRGIPVD 89 >gi|154244262|ref|YP_001415220.1| integral membrane sensor signal transduction histidine kinase [Xanthobacter autotrophicus Py2] gi|154158347|gb|ABS65563.1| integral membrane sensor signal transduction histidine kinase [Xanthobacter autotrophicus Py2] Length = 444 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 7/69 (10%) Query: 30 LIENSLDAESSRVETVIAG--GGKSFFQITDNGFGMTSEEIPMAVQRHCTS----KISDD 83 L+EN++D ++RV+ G + D+G G + E Q + TS ++ +D Sbjct: 325 LVENAVDFAATRVDISAQWSFAGLD-IVVADDGPGFSPEVSGRIGQPYVTSRARDRLEED 383 Query: 84 FSNIHTFGF 92 + GF Sbjct: 384 GESGLGLGF 392 >gi|260584261|ref|ZP_05852008.1| DNA gyrase, B subunit [Granulicatella elegans ATCC 700633] gi|260157779|gb|EEW92848.1| DNA gyrase, B subunit [Granulicatella elegans ATCC 700633] Length = 645 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ +E I ++ ++TD+G G+ + Sbjct: 49 EIVDNSIDEALAGFATHIEIEITP--ENHIRVTDDGRGIPVD 88 >gi|163868608|ref|YP_001609817.1| DNA topoisomerase IV subunit B [Bartonella tribocorum CIP 105476] gi|161018264|emb|CAK01822.1| topoisomerase protein [Bartonella tribocorum CIP 105476] Length = 688 Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 6/45 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 E+I+N++D A + +E + G + +TDNG G+ E P Sbjct: 85 EIIDNAMDEAVAGYADSIEVSLDRNG--YITVTDNGRGIPVENHP 127 >gi|315633998|ref|ZP_07889287.1| DNA topoisomerase (ATP-hydrolyzing) ParE [Aggregatibacter segnis ATCC 33393] gi|315477248|gb|EFU67991.1| DNA topoisomerase (ATP-hydrolyzing) ParE [Aggregatibacter segnis ATCC 33393] Length = 634 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++TDNG GM + Sbjct: 32 TRPNHLAQEVIDNSVDEALAGFATKIEVILHKD--QSIEVTDNGRGMPVD 79 >gi|294790228|ref|ZP_06755386.1| DNA gyrase, B subunit [Scardovia inopinata F0304] gi|294458125|gb|EFG26478.1| DNA gyrase, B subunit [Scardovia inopinata F0304] Length = 703 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 6/47 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G + Q+ D+G G+ +E+P Sbjct: 78 VYEIVDNSVDEALAGYASHIEVTILSG--NGIQVVDDGRGIPVDEVP 122 >gi|218462929|ref|ZP_03503020.1| integral membrane sensor signal transduction histidine kinase [Rhizobium etli Kim 5] Length = 192 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 26 AIKELIENSLDAESSR--VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 A+ L+ N++D +R + ++ G +TD G G+ +E + ++ Sbjct: 97 AVSNLVRNAIDHGGNRGMITVAVSDAGGGRISVTDEGPGIPAEHRELVLEPFY 149 >gi|190710555|gb|ACE95108.1| gyrase subunit B [Bacillus thuringiensis serovar monterrey] Length = 627 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDQINVSIEEY--NSIRVTDNGRGIP 77 >gi|148508004|gb|ABQ75803.1| DNA topoisomerase VI subunit B [uncultured haloarchaeon] Length = 786 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 67/184 (36%), Gaps = 40/184 (21%) Query: 27 IKELIENSLDA--ESS---RVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQR-HCTSK 79 +KE ++N+LDA E+ V I+ + + DNG G+ + +P + S+ Sbjct: 55 VKEAVDNALDATEEAGILPSVTVEISESESYYTLVVEDNGPGIPEKNVPKVFGKLLYGSR 114 Query: 80 ISDDFSNIHTFGFRGEALPSIGAV--SHLT------LMSRPPQNNTGAQIA--------I 123 + G +G + AV S LT + SRP N+T Q+ Sbjct: 115 FGS---LTQSRGQQGIGIS--AAVLYSQLTSGKPAVITSRPKGNDTAFQVELTLNTDTNT 169 Query: 124 SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 S + GT +E+ + + AR + + I+ A+ P Sbjct: 170 PEIHASQNINWDHSHGTRIEL-QMEANLRARKP-----------LLEYIQATAVVNPHSE 217 Query: 184 FTFS 187 TF Sbjct: 218 ITFM 221 >gi|312171161|emb|CBX79420.1| hypothetical protein EAIL5_0600 [Erwinia amylovora ATCC BAA-2158] Length = 138 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 18/94 (19%) Query: 6 LSEKIINQI---AAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 L +II+ I AG A+ ELI NS+DA +S V I G + D+G G Sbjct: 7 LDPQIIHHIIYSQAG----SIGKAVIELIMNSVDAGASMVSIDIMPEGFAC---RDDGRG 59 Query: 63 MTS-EEIPMAVQRHCT-SKISDDFSNIHTFG-FR 93 S E++ R T K D TFG FR Sbjct: 60 FASYEDVKRYFGRFGTPHKEGD-----ATFGRFR 88 >gi|227893834|ref|ZP_04011639.1| DNA topoisomerase [Lactobacillus ultunensis DSM 16047] gi|227864323|gb|EEJ71744.1| DNA topoisomerase [Lactobacillus ultunensis DSM 16047] Length = 654 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E + G + D+G G+ + Sbjct: 58 EIIDNSIDERLAGFATKIEVTVNEDG--SVTVQDDGRGIPVD 97 >gi|294674979|ref|YP_003575595.1| DNA gyrase subunit B [Prevotella ruminicola 23] gi|294471706|gb|ADE81095.1| DNA gyrase, B subunit [Prevotella ruminicola 23] Length = 658 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 6/48 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 + E ++NS+D A + +E I + + DNG G+ +E Sbjct: 46 VNETVDNSIDEAMAGYCTHIEVTINED--NSITVQDNGRGIPVDEHEK 91 >gi|91202151|emb|CAJ75211.1| unknown protein [Candidatus Kuenenia stuttgartiensis] Length = 568 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 64/196 (32%), Gaps = 44/196 (22%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEE--IPMA------- 71 E P++ I EL++N++ A++S+++ I G + D+G+G S E + +A Sbjct: 19 EHPAMLITELVQNAVRAKASKIDIAIEDGTL---VVCDDGYGCDSHEPLLTLAESCWDAE 75 Query: 72 ------------VQRHC-------TSKISDDFSNIHTFGF------RGEALPSIGAVSHL 106 +C TS+ I T F RG+AL +V L Sbjct: 76 VEENEQPAGWGLFVLYCLAEKVSLTSRFGT--LTIDTALFFNDAVYRGKAL----SVGEL 129 Query: 107 TLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETN 166 S+ + K+ + ++ + + E + Sbjct: 130 VDTSKTA-EGFTISATMDSRKMKQIAGISHKRLQYFPIEITLNGDSVVRESVVEEYKDYP 188 Query: 167 LITDVIRRMAIAYPKV 182 + + PK Sbjct: 189 IKAQYMGNDVFINPKR 204 >gi|89099083|ref|ZP_01171962.1| two-component sensor histidine kinase [Bacillus sp. NRRL B-14911] gi|89086213|gb|EAR65335.1| two-component sensor histidine kinase [Bacillus sp. NRRL B-14911] Length = 590 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 7/61 (11%) Query: 21 ERPSIAIKELIENSL-----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + LI+N++ D S ++ G +++D+G G+ E++P +R Sbjct: 480 DRIEQVLTNLIDNAIRHTPED-GSVKITVKSEEKGL-MVEVSDSGSGIPEEDLPFVFERF 537 Query: 76 C 76 Sbjct: 538 Y 538 >gi|313890482|ref|ZP_07824110.1| DNA gyrase, B subunit [Streptococcus pseudoporcinus SPIN 20026] gi|313120999|gb|EFR44110.1| DNA gyrase, B subunit [Streptococcus pseudoporcinus SPIN 20026] Length = 650 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E +I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIEVIIEED--NSITVVDDGRGIPVD 90 >gi|154496136|ref|ZP_02034832.1| hypothetical protein BACCAP_00420 [Bacteroides capillosus ATCC 29799] gi|150274691|gb|EDN01755.1| hypothetical protein BACCAP_00420 [Bacteroides capillosus ATCC 29799] Length = 649 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A R++ I G +TDNG G+ + Sbjct: 52 VYEIVDNSIDEALAGYCDRIDVAILEG--DIISVTDNGRGIPVD 93 >gi|332523189|ref|ZP_08399441.1| DNA gyrase, B subunit [Streptococcus porcinus str. Jelinkova 176] gi|332314453|gb|EGJ27438.1| DNA gyrase, B subunit [Streptococcus porcinus str. Jelinkova 176] Length = 650 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIEVFIEED--NSITVVDDGRGIPVD 90 >gi|304314603|ref|YP_003849750.1| sensory transduction histidine kinase [Methanothermobacter marburgensis str. Marburg] gi|302588062|gb|ADL58437.1| predicted sensory transduction histidine kinase [Methanothermobacter marburgensis str. Marburg] Length = 583 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 24/75 (32%) Query: 26 AIKELIENSL------DAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 I EL+ NS+ D + + GG+ ++DNG G+ E++ Sbjct: 492 IINELVTNSIKYAFPDDGG--EITVEVHRNGGRYTLIVSDNGVGL-PEDL---------- 538 Query: 79 KISDDFSNIHTFGFR 93 D NI T G R Sbjct: 539 ----DLENISTLGLR 549 >gi|260591900|ref|ZP_05857358.1| putative DNA topoisomerase IV, B subunit [Prevotella veroralis F0319] gi|260536184|gb|EEX18801.1| putative DNA topoisomerase IV, B subunit [Prevotella veroralis F0319] Length = 647 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 73/263 (27%), Gaps = 34/263 (12%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT-SKI 80 +KE+I+NS+D A R+E I + D G G+ ++ AV T K Sbjct: 49 LKEVIDNSIDEFKMNAG-DRIEIDIEDN--LRVSVRDYGRGIPQGKLVEAVSVLNTGGKY 105 Query: 81 SDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 + G G AL S H + S + + Sbjct: 106 DSKAFK-KSVGLNGVGVKAVNALSS-----HFEVKSFREGKVRALSFEKGNLQGDKTKKT 159 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF----TFSTIK 190 GT + K+ +++ +++R ++ + Sbjct: 160 NDESGTYIYFE-------PDNTLFKNYSFHDDIVEEMLRNYTYLNTGLTIMYNGRRILSR 212 Query: 191 SNRYKMNFQSTNGNFPERISQVIGED--FINNAVELNEKSNEITLQGYTGIPTFNRGNAN 248 + + G+ I + GED + + G A Sbjct: 213 HGLKDLLTDNMTGDPLYPIVHMKGEDIEIAFTHTNQYGEEYYSFVNGQHTTQGGTHQTAF 272 Query: 249 QFYVFINGRTVQDKFILSTIRTA 271 + ++ + K+ IR Sbjct: 273 KEHIAKTIKEFFGKYEYGDIRNG 295 >gi|293390334|ref|ZP_06634668.1| DNA topoisomerase IV, B subunit [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950868|gb|EFE00987.1| DNA topoisomerase IV, B subunit [Aggregatibacter actinomycetemcomitans D7S-1] Length = 632 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++ DNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEVLAGFATKIEVILHKD--QSIEVIDNGRGMPVD 77 >gi|261868257|ref|YP_003256179.1| DNA topoisomerase IV subunit B [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413589|gb|ACX82960.1| DNA topoisomerase IV, B subunit [Aggregatibacter actinomycetemcomitans D11S-1] Length = 632 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++ DNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFATKIEVILHKD--QSIEVIDNGRGMPVD 77 >gi|167761224|ref|ZP_02433351.1| hypothetical protein CLOSCI_03629 [Clostridium scindens ATCC 35704] gi|167660890|gb|EDS05020.1| hypothetical protein CLOSCI_03629 [Clostridium scindens ATCC 35704] Length = 185 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 3/49 (6%) Query: 32 ENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCT 77 ENS+ A + +E + + I D+G GM E++ T Sbjct: 14 ENSIRAGAGYIEIDVIADSQKDTLEIMIRDDGCGMDEEQVRRVTDPFYT 62 >gi|19568163|gb|AAL91672.1|AF316502_1 putative topoisomerase IV subunit B [Aggregatibacter actinomycetemcomitans] Length = 294 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++ DNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFATKIEVILHKD--QSIEVIDNGRGMPVD 77 >gi|331006335|ref|ZP_08329648.1| putative DNA mismatch repair protein [gamma proteobacterium IMCC1989] gi|330419856|gb|EGG94209.1| putative DNA mismatch repair protein [gamma proteobacterium IMCC1989] Length = 658 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Query: 25 IAIKELIENSLDAESSRVETVIA--GGGKSFFQITDNGFGMTSEEIPMAVQ 73 A+ ELI N+ DA++ V+ I G + D+G G+ ++ Sbjct: 24 SALTELIWNAFDADADLVQVSIDRTDFGLQAVHVKDDGLGILHKDSKKLFS 74 >gi|323960319|gb|EGB55959.1| MutL dimerization domain-containing protein [Escherichia coli H489] Length = 170 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 16/139 (11%) Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 + + + +Q LL P + + E + + + L LGI + + I Sbjct: 20 RWLRQAQLTPGEAPVCAQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQS-DAQHVTI 78 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRIENILAT--MACYGSIRSGRKMQSI 555 R +P L ++N+ L+ ++I + + I +A M+ + + Sbjct: 79 RAVPLPLRQQNLQILIPELIGYLA--KQSVFEPGNIAQWIARNLMSEHA------QWSMA 130 Query: 556 EMNRLLREMEKNPNSSQCN 574 + LL ++E+ C Sbjct: 131 QAITLLADVERL-----CP 144 >gi|319893736|ref|YP_004150611.1| DNA gyrase subunit B [Staphylococcus pseudintermedius HKU10-03] gi|317163432|gb|ADV06975.1| DNA gyrase subunit B [Staphylococcus pseudintermedius HKU10-03] gi|323463206|gb|ADX75359.1| DNA gyrase, B subunit [Staphylococcus pseudintermedius ED99] Length = 640 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + +E VI ++ ++TDNG G+ + Sbjct: 46 EIVDNSIDEALAGYADNIEVVIEKD--NWIKVTDNGRGIPVD 85 >gi|164510805|emb|CAK18885.1| topoisomerase II subunit B [Staphylococcus pseudintermedius] Length = 611 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + +E VI ++ ++TDNG G+ + Sbjct: 17 EIVDNSIDEALAGYADNIEVVIEKD--NWIKVTDNGRGIPVD 56 >gi|164510802|emb|CAK18883.1| topoisomerase II subunit B [Staphylococcus pseudintermedius] Length = 611 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + +E VI ++ ++TDNG G+ + Sbjct: 17 EIVDNSIDEALAGYADNIEVVIEKD--NWIKVTDNGRGIPVD 56 >gi|164510799|emb|CAK18881.1| topoisomerase II subunit B [Staphylococcus intermedius] Length = 640 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + +E VI ++ ++TDNG G+ + Sbjct: 46 EIVDNSIDEALAGYADNIEVVIEKD--NWIKVTDNGRGIPVD 85 >gi|327485365|gb|AEA79771.1| Signal transduction histidine kinase [Vibrio cholerae LMA3894-4] Length = 684 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAESSRVE----TV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA S +E ++ + +++DNG G+ E + + Sbjct: 577 QRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEQQVIVRVSDNGCGIAPELLTTMFEPF 636 Query: 76 CTSK 79 TSK Sbjct: 637 QTSK 640 >gi|309702134|emb|CBJ01449.1| conserved hypothetical protein [Escherichia coli ETEC H10407] Length = 500 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 73/222 (32%), Gaps = 28/222 (12%) Query: 31 IENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNI-- 87 I+NS+ A + +V+ + + DNG GM++ E+ +A++ + + + Sbjct: 33 IDNSISAGARKVDLTFHWRESDCYIVVRDNGCGMSAAELDVAMRLG----VKNPLTKRPG 88 Query: 88 HTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVR 145 H G G L S LT+ S+ T + + S+ + G + Sbjct: 89 HDLGRFGLGLKTASFSQCRRLTVFSKKEGITTILRWDLDILAASTDDGWYLLEGADPGSQ 148 Query: 146 DLFFTIPARLNFLKSEQVETNLITDVIRRMAIA-YPKVSFTFSTIK--SNRYKMNFQSTN 202 + + ++ DV+ R+ Y + F + + + Sbjct: 149 EALANAEPDSHGT-------VVLWDVLDRIVTPGYGEKDFLNLMDGVEQHLAMVFHRFLE 201 Query: 203 GNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNR 244 GN P + G K + L G+ P + Sbjct: 202 GNAPRLTLTLNGRKI---------KGWDPFLSGHPSKPWHSP 234 >gi|229527878|ref|ZP_04417269.1| hypothetical protein VCG_000952 [Vibrio cholerae 12129(1)] gi|229334240|gb|EEN99725.1| hypothetical protein VCG_000952 [Vibrio cholerae 12129(1)] Length = 514 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAESSRVE----TV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA S +E ++ + +++DNG G+ E + + Sbjct: 407 QRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEQQVIVRVSDNGCGIAPELLTTMFEPF 466 Query: 76 CTSK 79 TSK Sbjct: 467 QTSK 470 >gi|254286631|ref|ZP_04961586.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae AM-19226] gi|150423215|gb|EDN15161.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae AM-19226] Length = 684 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAESSRVE----TV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA S +E ++ + +++DNG G+ E + + Sbjct: 577 QRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEQQVIVRVSDNGCGIAPELLTTMFEPF 636 Query: 76 CTSK 79 TSK Sbjct: 637 QTSK 640 >gi|254227083|ref|ZP_04920638.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae V51] gi|125620388|gb|EAZ48767.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae V51] Length = 684 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAESSRVE----TV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA S +E ++ + +++DNG G+ E + + Sbjct: 577 QRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEQQVIVRVSDNGCGIAPELLTTMFEPF 636 Query: 76 CTSK 79 TSK Sbjct: 637 QTSK 640 >gi|330837805|ref|YP_004412446.1| DNA gyrase subunit B [Spirochaeta coccoides DSM 17374] gi|329749708|gb|AEC03064.1| DNA gyrase subunit B [Spirochaeta coccoides DSM 17374] Length = 660 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 6/51 (11%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 IE + E+++NS+D A + I G + DNG G+ + Sbjct: 56 IEGLHHLVYEIVDNSIDEAMAGYCDYIRITIEPGQI--ITVEDNGRGIPVD 104 >gi|312135112|ref|YP_004002450.1| histidine kinase [Caldicellulosiruptor owensensis OL] gi|311775163|gb|ADQ04650.1| histidine kinase [Caldicellulosiruptor owensensis OL] Length = 185 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Query: 30 LIENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCT 77 L++NS++A +S V+ IA K I DNG G+ + I T Sbjct: 11 LVQNSIEAGASLVKIEIAEDLKEDLFTITIEDNGRGIPQDVIDRVTDPFYT 61 >gi|115381166|gb|ABI96232.1| DNA topoisomerase IV subunit B [Mesoplasma syrphidae] Length = 552 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 13/55 (23%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 E+++NS+D A ++ + V+ G ++DNG G+ + H T K Sbjct: 14 EIVDNSIDEALAGYATEINVVLEKNG--SVTVSDNGRGVP-------IGMHATGK 59 >gi|222150258|ref|YP_002559411.1| DNA gyrase subunit B [Macrococcus caseolyticus JCSC5402] gi|222119380|dbj|BAH16715.1| DNA gyrase subunit B [Macrococcus caseolyticus JCSC5402] Length = 642 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 31/92 (33%) Query: 1 MKI---RKLSEKIINQIAAGEIIERPSIAIK-------------------ELIENSLD-- 36 M I + L + +QI +++E K E+++NS+D Sbjct: 1 MNIVEQQNLDQYGADQI---QVLEGLEAVRKRPGMYIGSTASKGLHHLVWEIVDNSIDEA 57 Query: 37 -AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 A + VE I ++ ++TDNG G+ + Sbjct: 58 LAGYADHVEVTIEED--NWIKVTDNGRGIPVD 87 >gi|331015386|gb|EGH95442.1| hypothetical protein PLA106_05457 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 660 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 4/50 (8%) Query: 23 PSIAIKELIENSLDAESSRVETVI--AGGGKSFFQITDNGFGMTSEEIPM 70 P +A+ EL+ N+ DA +S+V+ + GG + D+G GM++++ Sbjct: 27 PQVALTELVANAWDAGASKVDLFLPSEPGGT--LTVIDDGHGMSAQQFSK 74 >gi|323439694|gb|EGA97412.1| DNA gyrase subunit B [Staphylococcus aureus O11] Length = 644 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYANQIEVVIEKD--NWIKVTDNGRGIPVD 89 >gi|314934956|ref|ZP_07842315.1| DNA gyrase, B subunit [Staphylococcus caprae C87] gi|313652886|gb|EFS16649.1| DNA gyrase, B subunit [Staphylococcus caprae C87] Length = 644 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 51 EIVDNSIDEALAGYANQIEVVIEKD--NWIKVTDNGRGIPVD 90 >gi|302331777|gb|ADL21970.1| DNA topoisomerase (ATP-hydrolyzing) subunit B, GyrB [Staphylococcus aureus subsp. aureus JKD6159] Length = 644 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYANQIEVVIEKD--NWIKVTDNGRGIPVD 89 >gi|294849833|ref|ZP_06790573.1| hypothetical protein SKAG_01922 [Staphylococcus aureus A9754] gi|294823381|gb|EFG39810.1| hypothetical protein SKAG_01922 [Staphylococcus aureus A9754] Length = 644 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYANQIEVVIEKD--NWIKVTDNGRGIPVD 89 >gi|288562960|pdb|3G75|A Chain A, Crystal Structure Of Staphylococcus Aureus Gyrase B Co- Complexed With Inhibitor gi|288562961|pdb|3G75|B Chain B, Crystal Structure Of Staphylococcus Aureus Gyrase B Co- Complexed With Inhibitor gi|288562962|pdb|3G7B|A Chain A, Staphylococcus Aureus Gyrase B Co-Complex With Inhibitor gi|288562963|pdb|3G7B|B Chain B, Staphylococcus Aureus Gyrase B Co-Complex With Inhibitor Length = 184 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 27 EIVDNSIDEALAGYANQIEVVIEKD--NWIKVTDNGRGIPVD 66 >gi|284023042|ref|ZP_06377440.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 132] Length = 644 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYANQIEVVIEKD--NWIKVTDNGRGIPVD 89 >gi|283469234|emb|CAQ48445.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ST398] Length = 644 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYANQIEVVIEKD--NWIKVTDNGRGIPVD 89 >gi|257871393|ref|ZP_05651046.1| DNA gyrase B subunit [Enterococcus gallinarum EG2] gi|257805557|gb|EEV34379.1| DNA gyrase B subunit [Enterococcus gallinarum EG2] Length = 649 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ ++ +I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFATAIQVIIEED--NSITVVDDGRGIPVD 90 >gi|223043343|ref|ZP_03613389.1| DNA gyrase, B subunit [Staphylococcus capitis SK14] gi|222443132|gb|EEE49231.1| DNA gyrase, B subunit [Staphylococcus capitis SK14] Length = 639 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 46 EIVDNSIDEALAGYANQIEVVIEKD--NWIKVTDNGRGIPVD 85 >gi|168002014|ref|XP_001753709.1| predicted protein [Physcomitrella patens subsp. patens] gi|162695116|gb|EDQ81461.1| predicted protein [Physcomitrella patens subsp. patens] Length = 445 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 7/72 (9%) Query: 26 AIKELIENSLDA---ESSRVETVIAGGGKSF---FQITDNGFGMTSEEIPMAVQRHCTSK 79 A+ EL++N++D ++ V ++ ++ I D+G GMT + + + +SK Sbjct: 55 AVAELVDNAVDEVMNGATFVNVDVSLHPRNRSPMLVIQDDGGGMTPDRMRQCMSLGYSSK 114 Query: 80 ISDDFSNIHTFG 91 D ++I +G Sbjct: 115 SKSD-NSIGQYG 125 >gi|98990338|gb|ABF60237.1| DNA gyrase subunit B [Entomoplasma freundtii] Length = 608 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 15/73 (20%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT--------SEEIPMAVQR-H 75 E+++NS+D A ++R+ I G + DNG G+ + + + H Sbjct: 14 EILDNSIDEAMAGYANRIVVTITKDG--EVVVEDNGRGIPVGVQHDTGRSALELVFTQLH 71 Query: 76 CTSKISDDFSNIH 88 K D I Sbjct: 72 AGGKFDSDSYKIS 84 >gi|82749782|ref|YP_415523.1| DNA gyrase subunit B [Staphylococcus aureus RF122] gi|82655313|emb|CAI79693.1| DNA gyrase subunit B [Staphylococcus aureus RF122] Length = 644 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYANQIEVVIEKD--NWIKVTDNGRGIPVD 89 >gi|221141520|ref|ZP_03566013.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus aureus subsp. aureus str. JKD6009] gi|257424201|ref|ZP_05600630.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 55/2053] gi|257426878|ref|ZP_05603280.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 65-1322] gi|257429514|ref|ZP_05605901.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257432161|ref|ZP_05608524.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257435122|ref|ZP_05611173.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M876] gi|258423233|ref|ZP_05686125.1| DNA gyrase subunit B [Staphylococcus aureus A9635] gi|282907052|ref|ZP_06314900.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Btn1260] gi|282910031|ref|ZP_06317839.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282912279|ref|ZP_06320075.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282912919|ref|ZP_06320711.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M899] gi|282922547|ref|ZP_06330237.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C101] gi|283959489|ref|ZP_06376930.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|293511562|ref|ZP_06670256.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M809] gi|293550171|ref|ZP_06672843.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M1015] gi|295429302|ref|ZP_06821924.1| hypothetical protein SIAG_01512 [Staphylococcus aureus subsp. aureus EMRSA16] gi|297589196|ref|ZP_06947837.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus aureus subsp. aureus MN8] gi|304379953|ref|ZP_07362682.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|59797755|sp|Q6GKU0|GYRB_STAAR RecName: Full=DNA gyrase subunit B gi|257273219|gb|EEV05321.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 55/2053] gi|257276509|gb|EEV07960.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus 65-1322] gi|257279995|gb|EEV10582.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257283040|gb|EEV13172.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257285718|gb|EEV15834.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M876] gi|257846562|gb|EEV70584.1| DNA gyrase subunit B [Staphylococcus aureus A9635] gi|269939531|emb|CBI47889.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TW20] gi|282314768|gb|EFB45154.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C101] gi|282323019|gb|EFB53338.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M899] gi|282323975|gb|EFB54291.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282326097|gb|EFB56402.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329951|gb|EFB59472.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus Btn1260] gi|283789081|gb|EFC27908.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|290919218|gb|EFD96294.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M1015] gi|291465520|gb|EFF08052.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus M809] gi|295127061|gb|EFG56705.1| hypothetical protein SIAG_01512 [Staphylococcus aureus subsp. aureus EMRSA16] gi|297577707|gb|EFH96420.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus aureus subsp. aureus MN8] gi|302749916|gb|ADL64093.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304341533|gb|EFM07443.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312436854|gb|ADQ75925.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus aureus subsp. aureus TCH60] gi|315195231|gb|EFU25619.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus aureus subsp. aureus CGS00] gi|329312728|gb|AEB87141.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus T0131] Length = 644 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYANQIEVVIEKD--NWIKVTDNGRGIPVD 89 >gi|57651113|ref|YP_184916.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus COL] gi|81859679|sp|Q5HJZ1|GYRB_STAAC RecName: Full=DNA gyrase subunit B gi|57285299|gb|AAW37393.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus COL] Length = 644 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYANQIEVVIEKD--NWIKVTDNGRGIPVD 89 >gi|49484917|ref|YP_042138.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSSA476] gi|49243360|emb|CAG41777.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MSSA476] Length = 643 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 49 EIVDNSIDEALAGYANQIEVVIEKD--NWIKVTDNGRGIPVD 88 >gi|49482258|ref|YP_039482.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MRSA252] gi|49240387|emb|CAG39033.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MRSA252] Length = 643 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 49 EIVDNSIDEALAGYANQIEVVIEKD--NWIKVTDNGRGIPVD 88 >gi|21281734|ref|NP_644820.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MW2] gi|87161454|ref|YP_492727.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88193828|ref|YP_498613.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151220216|ref|YP_001331039.1| DNA gyrase B subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|161508271|ref|YP_001573930.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253733834|ref|ZP_04867999.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TCH130] gi|258451362|ref|ZP_05699393.1| DNA gyrase, B subunit [Staphylococcus aureus A5948] gi|262049437|ref|ZP_06022309.1| DNA gyrase subunit B [Staphylococcus aureus D30] gi|262051893|ref|ZP_06024108.1| DNA gyrase subunit B [Staphylococcus aureus 930918-3] gi|282902636|ref|ZP_06310529.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C160] gi|282918073|ref|ZP_06325823.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus D139] gi|282920724|ref|ZP_06328443.1| DNA gyrase, B subunit [Staphylococcus aureus A9765] gi|282921295|ref|ZP_06329013.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C427] gi|283767795|ref|ZP_06340710.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus H19] gi|297209447|ref|ZP_06925845.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300911471|ref|ZP_07128920.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus aureus subsp. aureus TCH70] gi|59797750|sp|Q6GD85|GYRB_STAAS RecName: Full=DNA gyrase subunit B gi|59799585|sp|P0A0K7|GYRB_STAAW RecName: Full=DNA gyrase subunit B gi|59799586|sp|P0A0K8|GYRB_STAAU RecName: Full=DNA gyrase subunit B gi|93204588|sp|Q2FKQ1|GYRB_STAA3 RecName: Full=DNA gyrase subunit B gi|296395|emb|CAA50570.1| DNA gyrase [Staphylococcus aureus] gi|540541|dbj|BAA01369.1| DNA gyrase B [Staphylococcus aureus] gi|21203169|dbj|BAB93870.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus MW2] gi|87127428|gb|ABD21942.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201386|gb|ABD29196.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150373016|dbj|BAF66276.1| DNA gyrase B subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|160367080|gb|ABX28051.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253728137|gb|EES96866.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus TCH130] gi|257860892|gb|EEV83709.1| DNA gyrase, B subunit [Staphylococcus aureus A5948] gi|259160220|gb|EEW45249.1| DNA gyrase subunit B [Staphylococcus aureus 930918-3] gi|259162434|gb|EEW47004.1| DNA gyrase subunit B [Staphylococcus aureus D30] gi|282315710|gb|EFB46094.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C427] gi|282318358|gb|EFB48718.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus D139] gi|282594132|gb|EFB99120.1| DNA gyrase, B subunit [Staphylococcus aureus A9765] gi|282597095|gb|EFC02054.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus C160] gi|283461674|gb|EFC08758.1| DNA gyrase subunit B [Staphylococcus aureus subsp. aureus H19] gi|296885908|gb|EFH24843.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus aureus subsp. aureus ATCC 51811] gi|298693327|gb|ADI96549.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus ED133] gi|300887650|gb|EFK82846.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus aureus subsp. aureus TCH70] gi|315197923|gb|EFU28256.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus aureus subsp. aureus CGS01] gi|320141422|gb|EFW33265.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA131] gi|320144405|gb|EFW36170.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus MRSA177] gi|323443267|gb|EGB00884.1| DNA gyrase subunit B [Staphylococcus aureus O46] gi|329731718|gb|EGG68078.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 21189] Length = 644 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E VI ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYANQIEVVIEKD--NWIKVTDNGRGIPVD 89 >gi|114562357|ref|YP_749870.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella frigidimarina NCIMB 400] gi|114333650|gb|ABI71032.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella frigidimarina NCIMB 400] Length = 356 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 26/97 (26%) Query: 8 EKIINQ-IAAGE----------IIER------------PSIAIKELIENSLDAESSRVET 44 ++IINQ +A+ E ++E S A+ L+ NS++A +++++ Sbjct: 209 DEIINQVMASCEPIADKKHCQLVVEDTSHSLMLANANALSSAVNNLVMNSIEAGATKIKV 268 Query: 45 VIAG--GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 + G + DNG G+ ++ T+K Sbjct: 269 SASETPDGL-LLDVIDNGKGLEPSMQQQILEPFFTTK 304 >gi|91781650|ref|YP_556856.1| histidine kinase [Burkholderia xenovorans LB400] gi|91685604|gb|ABE28804.1| histidine kinase [Burkholderia xenovorans LB400] Length = 666 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 7/64 (10%) Query: 22 RPSIAIKELIENSLDAESS------RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N+LDA + +E +A SF ++DNG G+ + +P + Sbjct: 546 RLEQVLINLLGNALDATADINSPRISIEIEVADANLSF-AVSDNGPGIADDVLPRLFEPF 604 Query: 76 CTSK 79 T+K Sbjct: 605 FTTK 608 >gi|24379696|ref|NP_721651.1| DNA gyrase subunit B [Streptococcus mutans UA159] gi|290580305|ref|YP_003484697.1| putative DNA gyrase subunit B [Streptococcus mutans NN2025] gi|24377654|gb|AAN58957.1|AE014963_1 putative DNA gyrase subunit B [Streptococcus mutans UA159] gi|254997204|dbj|BAH87805.1| putative DNA gyrase subunit B [Streptococcus mutans NN2025] Length = 650 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIQVFIEED--NSITVIDDGRGIPVD 90 >gi|71907496|ref|YP_285083.1| DNA topoisomerase IV subunit B [Dechloromonas aromatica RCB] gi|71847117|gb|AAZ46613.1| DNA topoisomerase IV subunit B [Dechloromonas aromatica RCB] Length = 662 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 37/214 (17%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 P+ ++E+I+N+ D A + ++ I G +++DNG G+ EE + Sbjct: 42 TCPTHIVQEVIDNAADEALAGFAKKIAVAIRADGV--IEVSDNGRGIPVEIHPEEGRPAV 99 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRG----------EALPSIGAVSHLTLMSRPPQNNT 117 + + H K + + + + F G AL SI L + + Sbjct: 100 ELVFCKLHAGGKFNKK-ESGNAYRFSGGLHGVGVSVTNAL-SI----RLEVEIKRGGGIH 153 Query: 118 G-AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 A A + S T VR I + S +V + ++R A Sbjct: 154 HIAFGAGFVTEPLSRIGDCGQRNTGTTVR-----IQPDPKYFDSPKVNLGQLEHLLRSKA 208 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERIS 210 + P V+ ++ +++ ++ + Sbjct: 209 VLMPNVTVELDIEGQDKKVWCYENGMADYLNEMM 242 >gi|58336359|ref|YP_192944.1| DNA gyrase subunit B [Lactobacillus acidophilus NCFM] gi|227902590|ref|ZP_04020395.1| DNA gyrase subunit B [Lactobacillus acidophilus ATCC 4796] gi|58253676|gb|AAV41913.1| DNA gyrase subunit B [Lactobacillus acidophilus NCFM] gi|227869679|gb|EEJ77100.1| DNA gyrase subunit B [Lactobacillus acidophilus ATCC 4796] Length = 654 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++++E I G + D+G G+ + Sbjct: 58 EVIDNSIDERLAGFATKIEITINEDG--SVTVQDDGRGIPVD 97 >gi|304372931|ref|YP_003856140.1| Topoisomerase IV subunit B [Mycoplasma hyorhinis HUB-1] gi|304309122|gb|ADM21602.1| Topoisomerase IV subunit B [Mycoplasma hyorhinis HUB-1] Length = 649 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 56/405 (13%), Positives = 123/405 (30%), Gaps = 66/405 (16%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE-------EIPMAV-QRHC 76 E++ N++D A + + + G + D+G G+ E + + + H Sbjct: 40 EIVSNAVDEALAGFAKNIYVSLEENG--SIVVEDDGRGIPIEKHTSGLSGVELVFTELHA 97 Query: 77 TSKISDDFSNIHTFGFRG------EALPS--IGAVSHLTLMSRPPQNNTGAQIAISGEKI 128 K SD+ ++ G G AL S I V N I+G +I Sbjct: 98 GGKFSDEVYK-NSGGLHGVGSSVVNALSSKLIVNV--------YKNNKNYQTKFINGGQI 148 Query: 129 SSVRPVAMNP---GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFT 185 V + GT V+ P + F ++ + ++I++ +R ++ T Sbjct: 149 EQRTTVVGDSNKKGTRVQF------WPDKKIFAQN-KFSFDMISERLRETCFLISELKIT 201 Query: 186 FSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRG 245 ++ + + + + N + + + Sbjct: 202 L--EDQITFQKEAFFFKNGIKDFVEFINQGKTLLNKQAALINETQEKINVEIA-FQYTDS 258 Query: 246 NANQFYVFING------------------RTVQDKFILSTI---RTAYAETIPLGRYPVV 284 ++ F+N R D +I +T + + + + Sbjct: 259 YSDSIISFVNNIKTKSGGTHELGLKQALVRVFNDFAQQKSIFKNKTHTLDILDIKEGLTL 318 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 VL L++ P + V K + + + I K ++ + K+ + Sbjct: 319 VLSLKV-PEFLLEFVGQTKDKLGTQIAKSVVEDICYKQVLLWLNKNQQDANKIINKIKDA 377 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 F Q + K + S ++EK L ++ + Sbjct: 378 FDQRMSTKLSKIESKKSKDASKEKKILSGKLAPAQSKNKAEKELF 422 >gi|149377891|ref|ZP_01895620.1| Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Marinobacter algicola DG893] gi|149357833|gb|EDM46326.1| Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Marinobacter algicola DG893] Length = 422 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 30 LIENSLDAESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTSK 79 L+ NS++A +++VE + + +++DNG G T E+ ++ T+K Sbjct: 315 LVNNSVEAGATKVEVAVVSVDEELVVRVSDNGPGFTREQASQLLEAFYTTK 365 >gi|284162384|ref|YP_003401007.1| DNA topoisomerase VI subunit beta [Archaeoglobus profundus DSM 5631] gi|284012381|gb|ADB58334.1| DNA topoisomerase VI, B subunit [Archaeoglobus profundus DSM 5631] Length = 574 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 12/69 (17%) Query: 23 PSIAIKELIENSLDA--ESS---RVETVIAGGGKSF-FQITDNGFGMTSEEIP------M 70 +KE ++NSLDA E+ + I K + + DNG G+ +EIP + Sbjct: 30 LVTCVKEAVDNSLDACEEAGILPDILVRINRVDKHYRITVEDNGPGIEKDEIPRIFGKLL 89 Query: 71 AVQRHCTSK 79 R T K Sbjct: 90 YGSRFHTLK 98 >gi|152985251|ref|YP_001346379.1| two-component sensor [Pseudomonas aeruginosa PA7] gi|150960409|gb|ABR82434.1| probable two-component sensor [Pseudomonas aeruginosa PA7] Length = 434 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 11/77 (14%) Query: 5 KLSEKIINQIAAGEII-ERPSI---AIKELIENSLD-AESSRVETVIAGGGKSFFQITDN 59 +L + +I RP + LI+N+L A ++R+E G + Q+ DN Sbjct: 315 QLDGRTAA------VIDTRPHALRRVLVNLIDNALKFAGAARLEVERRADGGTRIQVLDN 368 Query: 60 GFGMTSEEIPMAVQRHC 76 G G+ E+ ++ Sbjct: 369 GPGIPPGELDEVLKPFY 385 >gi|297792383|ref|XP_002864076.1| hypothetical protein ARALYDRAFT_495140 [Arabidopsis lyrata subsp. lyrata] gi|297309911|gb|EFH40335.1| hypothetical protein ARALYDRAFT_495140 [Arabidopsis lyrata subsp. lyrata] Length = 804 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 11/71 (15%) Query: 29 ELIENSLD---AESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++N+LD ++ V + G I D+G GM E++ + + SK+ Sbjct: 177 ELLDNALDEVHTGATFVNVDMIENKKDGSKMVVIEDDGGGMNPEKMRHCMSLGYSAKSKL 236 Query: 81 SDDFSNIHTFG 91 +D I +G Sbjct: 237 AD---TIGQYG 244 >gi|330952329|gb|EGH52589.1| DNA gyrase subunit B [Pseudomonas syringae Cit 7] Length = 727 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 77/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S + L++ Q + G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEILLLTVRRSGKIWEQTYVHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ K+ +++ IR ++ V +S + + Sbjct: 161 ESDTTGTQIH-----FKPSAETFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTPVNQVFHFNIQRDDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|148262067|ref|YP_001236194.1| heat shock protein 90 [Acidiphilium cryptum JF-5] gi|146403748|gb|ABQ32275.1| heat shock protein Hsp90 [Acidiphilium cryptum JF-5] Length = 606 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 33/244 (13%), Positives = 75/244 (30%), Gaps = 47/244 (19%) Query: 19 IIERPSI----AIKELIENSLDA------------------ESSRVETVIAGGGKSFFQI 56 ++ ++EL+ N+ DA + + I ++ I Sbjct: 22 VVHSLYSEREIFLRELVANAADATDRRRFLALSDESLALPEGA-AIRISIDKPART-ITI 79 Query: 57 TDNGFGMTSEEI-------PMAVQRHCTSKIS----DDFSN-IHTF--GFRGEALPSIGA 102 D+G GMT+E++ + R T+ ++ +D N I F GF S Sbjct: 80 ADDGIGMTAEDLASHLGTIARSGTRAFTASLAEAKPEDRPNLIGQFGVGF-----YSAFM 134 Query: 103 VS-HLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNP-GTIV--EVRDLFFTIPARLNFL 158 V+ + + SR + + + G + GT + V+ + Sbjct: 135 VADRVEVTSRRAGTDAAHKWSSEGTGGYRIEAATRETPGTDIVLHVKSDADEFLEPVRLE 194 Query: 159 KSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFI 218 + + I+ + + + + + R + +F + + E + Sbjct: 195 TILRKWADHISVPVEIERDGKFQKANEGTALWRRRKADIAEKDYTDFYRHLGHMFDEPWA 254 Query: 219 NNAV 222 Sbjct: 255 TIHW 258 >gi|322385201|ref|ZP_08058848.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus cristatus ATCC 51100] gi|321270825|gb|EFX53738.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus cristatus ATCC 51100] Length = 649 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ ++ I + + D+G G+ + Sbjct: 50 EIVDNSIDEALAGFATHIQVFIEKD--NSITVVDDGRGIPVD 89 >gi|319939445|ref|ZP_08013805.1| DNA gyrase subunit B [Streptococcus anginosus 1_2_62CV] gi|319811431|gb|EFW07726.1| DNA gyrase subunit B [Streptococcus anginosus 1_2_62CV] Length = 648 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ ++ I + + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFATHIQVFIEKD--NSITVVDDGRGIPVD 88 >gi|315221787|ref|ZP_07863699.1| DNA gyrase, B subunit [Streptococcus anginosus F0211] gi|315189020|gb|EFU22723.1| DNA gyrase, B subunit [Streptococcus anginosus F0211] Length = 648 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ ++ I + + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFATHIQVFIEKD--NSITVVDDGRGIPVD 88 >gi|302340767|ref|YP_003805973.1| DNA gyrase subunit beta [Spirochaeta smaragdinae DSM 11293] gi|301637952|gb|ADK83379.1| DNA gyrase, B subunit [Spirochaeta smaragdinae DSM 11293] Length = 636 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 15/81 (18%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 E + E+++NS+D A + VI G ++ DNG G+ EE + Sbjct: 33 EGLHHLVYEIVDNSIDEALAGFCDEILVVIEKGNI--IRVEDNGRGIPTDLHKEEGVSAL 90 Query: 69 PMAVQR-HCTSKISDDFSNIH 88 + + + H K + D + Sbjct: 91 EIVMTKLHAGGKFNKDTYKVS 111 >gi|296531195|dbj|BAJ08046.1| DNA gyrase subunit B [Streptococcus intermedius] Length = 648 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ ++ I + + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFATHIQVFIEKD--NSITVVDDGRGIPVD 88 >gi|295101859|emb|CBK99404.1| DNA gyrase subunit B [Faecalibacterium prausnitzii L2-6] Length = 664 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A +E I G Q+TDNG G+ + Sbjct: 53 VYEIVDNAIDEALAGYCDHIEVKILKG--DIIQVTDNGRGIPVD 94 >gi|149919730|ref|ZP_01908208.1| hypothetical protein PPSIR1_03643 [Plesiocystis pacifica SIR-1] gi|149819501|gb|EDM78931.1| hypothetical protein PPSIR1_03643 [Plesiocystis pacifica SIR-1] Length = 645 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 47/139 (33%), Gaps = 30/139 (21%) Query: 28 KELIENSLDAESSRVETVIA----------------GGGKSFFQITDNGFGMTSEEIPMA 71 +ELI+N+LDA S+ VE G + D G GM + I Sbjct: 28 RELIQNALDAGSAEVEIDFEFQPAGEASEAGDASAAQAGAMVITVQDFGEGMDRQIIDSK 87 Query: 72 VQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTL-----MSRPPQNNTGAQIAISGE 126 + R +S D + I FG IG VS + + ++ + Sbjct: 88 LTRLFSSAKDGDMTKIGKFG--------IGFVSVFAIEPDAVCVDTARAGEAWRVLFDVD 139 Query: 127 K-ISSVRPVAMNPGTIVEV 144 + +R GT V + Sbjct: 140 RNFKRLRLDQAMEGTTVRI 158 >gi|323144110|ref|ZP_08078750.1| DNA topoisomerase IV, B subunit [Succinatimonas hippei YIT 12066] gi|322416125|gb|EFY06819.1| DNA topoisomerase IV, B subunit [Succinatimonas hippei YIT 12066] Length = 638 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 15/68 (22%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EIPMAVQR-H 75 E+I+NS+D A ++++E + G ++ DNG GM + I + R H Sbjct: 42 EVIDNSVDEALAGFATKIEVNLYKDG--SLEVIDNGRGMPVDMHPTEKIPAIELIFSRLH 99 Query: 76 CTSKISDD 83 K S+D Sbjct: 100 AGGKFSND 107 >gi|225575309|ref|ZP_03783919.1| hypothetical protein RUMHYD_03398 [Blautia hydrogenotrophica DSM 10507] gi|225037505|gb|EEG47751.1| hypothetical protein RUMHYD_03398 [Blautia hydrogenotrophica DSM 10507] Length = 321 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Query: 30 LIENSL---DAESSRVETVIAGGGK-SFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N++ D+ +++ + + D+G G+ E+ QR SK Sbjct: 204 LVDNAIKYTDSG-GKIQIEVIPYTIFCRINVIDDGRGICEEDQAKIFQRFYRSK 256 >gi|73670272|ref|YP_306287.1| DNA topoisomerase VI subunit B [Methanosarcina barkeri str. Fusaro] gi|121729410|sp|Q468I5|TOP6B_METBF RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|72397434|gb|AAZ71707.1| DNA topoisomerase subunit B [Methanosarcina barkeri str. Fusaro] Length = 621 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 63/188 (33%), Gaps = 49/188 (26%) Query: 27 IKELIENSLDA--ESS---RVETVIAGGGKSFFQI--TDNGFGMTSEEIPMAV------Q 73 +KE ++N+LDA E+ + I G+ + + DNG G+ E+IP Sbjct: 42 VKEAVDNALDACEEAGILPDILVQIERTGQDYVTVIIEDNGPGIIKEQIPKVFAKLLYGS 101 Query: 74 RHCTSKISDDFSNIHTFGFRGEALPSIGAV--SHLT------LMSRPPQNNTGAQIAISG 125 R K + G +G + AV + +T ++S+ N + Sbjct: 102 RFHALK--------QSRGQQGIGIS--AAVLYAQMTAGKQTKILSKTGSGNPAHYYELMI 151 Query: 126 EK--------ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 +R GT +E+ + R I++ ++ AI Sbjct: 152 NTSTNEPDILKDEIRDWFRPHGTQIELEMKAAYVKGRRQS----------ISEYLKATAI 201 Query: 178 AYPKVSFT 185 P T Sbjct: 202 VNPHARIT 209 >gi|262403334|ref|ZP_06079894.1| signal transduction histidine kinase [Vibrio sp. RC586] gi|262350833|gb|EEY99966.1| signal transduction histidine kinase [Vibrio sp. RC586] Length = 684 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAESSRVE----TV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA S +E ++ + +++DNG G+ E + + Sbjct: 577 QRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEQQVIVRVSDNGCGIAPELLTTMFEPF 636 Query: 76 CTSK 79 TSK Sbjct: 637 QTSK 640 >gi|262166787|ref|ZP_06034524.1| DNA gyrase subunit B [Vibrio mimicus VM223] gi|262026503|gb|EEY45171.1| DNA gyrase subunit B [Vibrio mimicus VM223] Length = 805 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 81/246 (32%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + I + ++D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGYCKDIVVTIHED--NSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L++ +Q G + + V Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKVLLTIHRGGKIHSQTYHHGVPQAPLSVVG 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T VR P+ F + + +++ +R ++ VS + + K Sbjct: 159 ETERTGTTVRF----WPSAQTFT-NIEFHYDILAKRLRELSFLNSGVSIKLTDEREEDKK 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 +F G ++ + + + +N G Y F N Sbjct: 214 DHFMYEGG-IQAFVTHLNRNKTPIHEKVFHFNQEREDGISVEVAMQWNDGFQENIYCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|120554917|ref|YP_959268.1| PAS/PAC sensor signal transduction histidine kinase [Marinobacter aquaeolei VT8] gi|120324766|gb|ABM19081.1| PAS/PAC sensor signal transduction histidine kinase [Marinobacter aquaeolei VT8] Length = 411 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 30 LIENSLDAESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ NSL+A ++ V V++ G+ +++DNG G E ++ T+K Sbjct: 316 LVNNSLEAGAADVSIVVSATSGRLEIRVSDNGPGFEPGEAGRIMEAFYTTK 366 >gi|302337572|ref|YP_003802778.1| integral membrane sensor signal transduction histidine kinase [Spirochaeta smaragdinae DSM 11293] gi|301634757|gb|ADK80184.1| integral membrane sensor signal transduction histidine kinase [Spirochaeta smaragdinae DSM 11293] Length = 531 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Query: 30 LIENSLDAESSRVETVIAGGGKSF--FQITDNGFGMTSEEIPMAVQRH 75 L++N+LD SSRV+ + G+ ++ D+G G+ + P R Sbjct: 431 LLDNALDFASSRVDLSLFPLGERNVGIRVEDDGPGIDPADAPHLFSRF 478 >gi|170079619|ref|YP_001736252.1| hypothetical protein SYNPCC7002_F0066 [Synechococcus sp. PCC 7002] gi|169887288|gb|ACB00997.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein protein [Synechococcus sp. PCC 7002] Length = 519 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 21/87 (24%) Query: 23 PSIAIKELIENSLDAESSRV------ETVIAGG---GKSFFQITDNGFGMT-SEEIPMAV 72 P +KEL++N+LD + + + G G+ + + DNG G+ ++ + Sbjct: 25 PEHLVKELVQNALD----SIAEGEPGQINLNYGYHQGQFYIECRDNGSGIECLSDLRVVY 80 Query: 73 QRHCTSKISDDFSNIHTFGFRG--EAL 97 H T D FG RG EAL Sbjct: 81 LTHKT----DSHLKRGRFG-RGFKEAL 102 >gi|313905800|ref|ZP_07839159.1| histidine kinase [Eubacterium cellulosolvens 6] gi|313469406|gb|EFR64749.1| histidine kinase [Eubacterium cellulosolvens 6] Length = 741 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 18 EIIERPSIAIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIP 69 E+I+ A+ EL++N+ DA+S V I + D+G GM+S +I Sbjct: 53 ELIQDQCAALVELVKNAYDADSKDVNIAIIKNNDDITISVIDHGHGMSSRDIA 105 >gi|262277071|ref|ZP_06054864.1| DNA topoisomerase IV, B subunit [alpha proteobacterium HIMB114] gi|262224174|gb|EEY74633.1| DNA topoisomerase IV, B subunit [alpha proteobacterium HIMB114] Length = 646 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 64/195 (32%), Gaps = 29/195 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM---------AVQRH 75 E+++NS+D A + + + K+ I+D+G G+ ++ P H Sbjct: 43 EILDNSIDEAVAGYAKEIVIKLVN--KNTIIISDDGRGIPIDKHPKKKKTALEVVMTTLH 100 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-----HLTLMSRPPQNNTGAQIAISGEKISS 130 K +D + G G L + A+S +T S+ + K+ + Sbjct: 101 SGGKFNDSVYK-SSAGLHGVGLSVVNALSSKLNIQVTKSSKIYSQD--YSKGKILNKLKT 157 Query: 131 VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 + GT + P F K + I ++ + A + ++ K Sbjct: 158 KGKNKIKNGTQITFS------PDPEIFGKDVNFKPEKIYELAKNKAYLQKGIKISWECNK 211 Query: 191 SNRYKMNFQSTNGNF 205 + + + Sbjct: 212 DLLNRKSSVPSKETL 226 >gi|254482729|ref|ZP_05095967.1| DNA topoisomerase IV, B subunit [marine gamma proteobacterium HTCC2148] gi|214037088|gb|EEB77757.1| DNA topoisomerase IV, B subunit [marine gamma proteobacterium HTCC2148] Length = 628 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A + +++ ++ GG ++DNG GM + Sbjct: 29 TRPNHLAQEVIDNSVDEALAGHADQIDVILHKGG--SVSVSDNGRGMPVD 76 >gi|260429557|ref|ZP_05783534.1| PAS/PAC sensor signal transduction histidine kinase [Citreicella sp. SE45] gi|260420180|gb|EEX13433.1| PAS/PAC sensor signal transduction histidine kinase [Citreicella sp. SE45] Length = 444 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Query: 30 LIENSLDA----ESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N++DA ++ +V +A G + ++DNG G+ + T+K Sbjct: 342 LVQNAIDAVDGQKAPQVTIALARHDGMARLTVSDNGPGIPEAQRAAVFDPFFTTK 396 >gi|154151277|ref|YP_001404895.1| DNA topoisomerase VI subunit B [Candidatus Methanoregula boonei 6A8] gi|153999829|gb|ABS56252.1| DNA topoisomerase VI, B subunit [Methanoregula boonei 6A8] Length = 600 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 60/190 (31%), Gaps = 45/190 (23%) Query: 27 IKELIENSLDA--ESS---RVETVIAGGG--KSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 IKE ++N+LDA E+ + I G + DNG G+ ++P K Sbjct: 40 IKEAVDNALDACEEAQVLPDIYISIKKTGPEIFRIIVEDNGPGIVPAQVPFVFG-----K 94 Query: 80 I--SDDFSNIH-TFGFRGEALPSIGAV--SHLT------LMSRPPQNNTGAQIAISGEKI 128 + F I T G +G + AV + LT ++SR + I + Sbjct: 95 LLYGSRFHQIRQTRGQQGIGIS--AAVLYAQLTSGLPTVVISRTGVKEQAHKFGIQIKIE 152 Query: 129 --------SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 GT V++ KS + + +R +I P Sbjct: 153 TNEPDVISEQPFEWDRIHGTRVQIE------------FKSTMSAKKKLLEYLRYTSIVNP 200 Query: 181 KVSFTFSTIK 190 F Sbjct: 201 HARFRVELDD 210 >gi|330723480|gb|AEC45850.1| Topoisomerase IV subunit B [Mycoplasma hyorhinis MCLD] Length = 649 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 56/405 (13%), Positives = 123/405 (30%), Gaps = 66/405 (16%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE-------EIPMAV-QRHC 76 E++ N++D A + + + G + D+G G+ E + + + H Sbjct: 40 EIVSNAVDEALAGFAKNIYVSLEENG--SIVVEDDGRGIPIEKHTSGLSGVELVFTELHA 97 Query: 77 TSKISDDFSNIHTFGFRG------EALPS--IGAVSHLTLMSRPPQNNTGAQIAISGEKI 128 K SD+ ++ G G AL S I V N I+G +I Sbjct: 98 GGKFSDEVYK-NSGGLHGVGSSVVNALSSKLIVNV--------YKNNKNYQTKFINGGQI 148 Query: 129 SSVRPVAMNP---GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFT 185 V + GT V+ P + F ++ + ++I++ +R ++ T Sbjct: 149 EQRTTVVGDSNKKGTRVQF------WPDKKIFAQN-KFSFDMISERLRETCFLISELKIT 201 Query: 186 FSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRG 245 ++ + + + + N + + + Sbjct: 202 L--EDQITFQKEAFFFKNGIKDFVEFINQGKTLLNKQAALINETQEKINVEIA-FQYTDS 258 Query: 246 NANQFYVFING------------------RTVQDKFILSTI---RTAYAETIPLGRYPVV 284 ++ F+N R D +I +T + + + + Sbjct: 259 YSDSIISFVNNIKTKSGGTHELGLKQALVRVFNDFAQQKSIFKNKTHTLDILDIKEGLTL 318 Query: 285 VLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 VL L++ P + V K + + + I K ++ + K+ + Sbjct: 319 VLSLKV-PEFLLEFVGQTKDKLGTQIAKSVVEDICYKQVLLWLNKNQQEANKIINKIKDA 377 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTY 389 F Q + K + S ++EK L ++ + Sbjct: 378 FDQRMSTKLSKIESKKSKDASKEKKILSGKLAPAQSKNKAEKELF 422 >gi|90407086|ref|ZP_01215275.1| DNA topoisomerase IV subunit B [Psychromonas sp. CNPT3] gi|90311808|gb|EAS39904.1| DNA topoisomerase IV subunit B [Psychromonas sp. CNPT3] Length = 629 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 80/209 (38%), Gaps = 29/209 (13%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A ++ ++ ++ ++TD+G GM EE + Sbjct: 31 RPNHLAQEVIDNSVDEALAGHATSIQVILHED--QSIEVTDDGRGMPVDIHPEEKISGVE 88 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS---HLTLMSRPPQNNTGAQIAISG 125 + + H K S I + G G + + A+S + + + + Sbjct: 89 LIFCKLHAGGKFSGKNYAI-SGGLHGVGISVVNALSARVDVNIRRNAKVYHIAFEHGEKV 147 Query: 126 EKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS- 183 E++ + N GT V R P + S + + + +++ A+ P +S Sbjct: 148 EELKEIDTCGKRNTGTSVHFR------PDPR-YFDSAKFSVSRLLHLLKAKAVLCPGLSI 200 Query: 184 -FTFSTIKSNRYKMNFQSTNGNFPERISQ 211 F K+N + N E + + Sbjct: 201 KFKDRVNKNNYHWCYKDGLNDYLLEAVHE 229 >gi|77361502|ref|YP_341077.1| DNA topoisomerase IV subunit B [Pseudoalteromonas haloplanktis TAC125] gi|76876413|emb|CAI87635.1| DNA topoisomerase IV, subunit B [Pseudoalteromonas haloplanktis TAC125] Length = 629 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 81/218 (37%), Gaps = 32/218 (14%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A ++R++ ++ + +++D+G GM EE + Sbjct: 32 RPNHLGQEVIDNSVDEAMAGHATRIDVILHED--NSLEVSDDGRGMPIDIHPEEGIPGVE 89 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEK 127 + + H K S+ + G G + + A+S + + R ++A + Sbjct: 90 LIFTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSTRVEVTVRRDAQQ--YRMAFENGE 146 Query: 128 ISSVRPVAM-----NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 V N GT V +++ S + +++ A+ P + Sbjct: 147 KVEDLSVIGVVGKRNTGTTVRFW-------PDVSYFDSPNYSITKLNHLLKAKAVLCPGL 199 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 F K + + G I + G + + + Sbjct: 200 RIKF-VNKQTKETQEWFYETGLKDYLIEAIKGYETLPD 236 >gi|296268958|ref|YP_003651590.1| histidine kinase [Thermobispora bispora DSM 43833] gi|296091745|gb|ADG87697.1| histidine kinase [Thermobispora bispora DSM 43833] Length = 950 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 12/68 (17%) Query: 17 GEIIERPSIAIKELIENSL-----DAESSRVET---VIAGGGKSFFQITDNGFGMTSEEI 68 G+ + + ELIEN+L D S+V I GGG ++D G GMT EEI Sbjct: 515 GQAVNDVVHLLAELIENALSFSPRD---SKVTVSSSRIDGGGL-LISVSDTGIGMTPEEI 570 Query: 69 PMAVQRHC 76 A R Sbjct: 571 EQANHRLA 578 >gi|269303150|gb|ACZ33250.1| DNA gyrase, B subunit [Chlamydophila pneumoniae LPCoLN] Length = 805 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 8/52 (15%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 I + E+++NS+D A SR++ I GG I DNG G+ E Sbjct: 35 ITGLHHLVYEVVDNSIDEAMAGYCSRIDVRILEDGG---IVIVDNGRGIPIE 83 >gi|253579801|ref|ZP_04857069.1| sensor protein ResE [Ruminococcus sp. 5_1_39B_FAA] gi|251848800|gb|EES76762.1| sensor protein ResE [Ruminococcus sp. 5_1_39BFAA] Length = 345 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 7/63 (11%) Query: 31 IENSLD---AESSRVETVIAG--GGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFS 85 ++N+ D + ++ + G ITDNG G+ E+I +R S+ S D Sbjct: 246 VKNAFDHTESGAT-IHVAWKELPSGVQ-IVITDNGCGIHPEDIHHIFKRFYRSRFSKDKQ 303 Query: 86 NIH 88 I Sbjct: 304 GIG 306 >gi|15618195|ref|NP_224480.1| DNA gyrase subunit B [Chlamydophila pneumoniae CWL029] gi|15835810|ref|NP_300334.1| DNA gyrase subunit B [Chlamydophila pneumoniae J138] gi|16752763|ref|NP_445031.1| DNA gyrase subunit B [Chlamydophila pneumoniae AR39] gi|33241617|ref|NP_876558.1| DNA gyrase subunit B [Chlamydophila pneumoniae TW-183] gi|6647530|sp|Q9Z8R3|GYRB_CHLPN RecName: Full=DNA gyrase subunit B gi|4376548|gb|AAD18424.1| DNA Gyrase Subunit B [Chlamydophila pneumoniae CWL029] gi|7189402|gb|AAF38314.1| DNA gyrase, subunit B [Chlamydophila pneumoniae AR39] gi|8978649|dbj|BAA98485.1| DNA gyrase subunit B [Chlamydophila pneumoniae J138] gi|28415637|dbj|BAC57414.1| DNA Gyrase Subunit B [Chlamydophila pneumoniae] gi|33236126|gb|AAP98215.1| DNA gyrase subunit B [Chlamydophila pneumoniae TW-183] Length = 805 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 8/52 (15%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 I + E+++NS+D A SR++ I GG I DNG G+ E Sbjct: 35 ITGLHHLVYEVVDNSIDEAMAGYCSRIDVRILEDGG---IVIVDNGRGIPIE 83 >gi|312901968|ref|ZP_07761230.1| hypothetical protein HMPREF9510_02743 [Enterococcus faecalis TX0470] gi|311290904|gb|EFQ69460.1| hypothetical protein HMPREF9510_02743 [Enterococcus faecalis TX0470] Length = 645 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 33/61 (54%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTS 65 ++ ++I I EIIE IAI E I+NS DA S ++ + ITDNG GMT Sbjct: 17 INPRLIPGILGSEIIESYGIAIAEQIKNSADAGSKSARVDLSKINEDIIVITDNGEGMTK 76 Query: 66 E 66 + Sbjct: 77 Q 77 >gi|311109657|ref|YP_003982510.1| His Kinase A phosphoacceptor domain-containing protein 14 [Achromobacter xylosoxidans A8] gi|310764346|gb|ADP19795.1| His Kinase A phosphoacceptor domain protein 14 [Achromobacter xylosoxidans A8] Length = 495 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 15/88 (17%) Query: 3 IR-KLSEKIINQIAAG-EIIERPSIAI------KE----LIENSL--DAESSRVETVIA- 47 IR L Q+ G E RP + +E L++N++ + + V + Sbjct: 344 IRGLLPTARARQLDIGLEADIRPVTVLGAEWLLREAVSNLVDNAIRYTSSAGEVTVKVQV 403 Query: 48 GGGKSFFQITDNGFGMTSEEIPMAVQRH 75 G++ + DNG GM++E+I A R Sbjct: 404 EAGQARLVVEDNGPGMSAEDIARACIRF 431 >gi|304373561|ref|YP_003858306.1| gp39plus60 DNA topoisomerase II large subunit [Enterobacteria phage RB16] gi|299829517|gb|ADJ55310.1| gp39plus60 DNA topoisomerase II large subunit [Enterobacteria phage RB16] Length = 631 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 10/59 (16%) Query: 18 EIIERPSIAIKELIENSLDAE-------SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 E +E I E+++NS+D ++++E I I+DNG G+ +++ Sbjct: 64 EYVEGLVKIINEILDNSIDEAIRTDFKFANKIEVKIDHN---LVTISDNGRGIPQDDVR 119 >gi|70725006|ref|YP_251920.1| DNA gyrase subunit B [Staphylococcus haemolyticus JCSC1435] gi|68445730|dbj|BAE03314.1| DNA gyrase (topoisomerase II) subunit B [Staphylococcus haemolyticus JCSC1435] Length = 644 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E +I ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYANQIEVIIEKD--NWIKVTDNGRGIPVD 89 >gi|293191018|ref|ZP_06609062.1| DNA gyrase, B subunit [Actinomyces odontolyticus F0309] gi|292820705|gb|EFF79671.1| DNA gyrase, B subunit [Actinomyces odontolyticus F0309] Length = 674 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A + +E I GG ++ DNG G+ +E P Sbjct: 48 VYEVVDNSVDEALAGYADHIEVTIQEDGG---IKVVDNGRGIPVDEHP 92 >gi|154508246|ref|ZP_02043888.1| hypothetical protein ACTODO_00740 [Actinomyces odontolyticus ATCC 17982] gi|153797880|gb|EDN80300.1| hypothetical protein ACTODO_00740 [Actinomyces odontolyticus ATCC 17982] Length = 674 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A + +E I GG ++ DNG G+ +E P Sbjct: 48 VYEVVDNSVDEALAGYADHIEVTIQEDGG---IKVVDNGRGIPVDEHP 92 >gi|33469292|gb|AAQ19683.1| DNA gyrase subunit B [Staphylococcus haemolyticus] Length = 644 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 27/42 (64%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++E +I ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYANQIEVIIEKD--NWIKVTDNGRGIPVD 89 >gi|222056472|ref|YP_002538834.1| PAS/PAC sensor signal transduction histidine kinase [Geobacter sp. FRC-32] gi|221565761|gb|ACM21733.1| PAS/PAC sensor signal transduction histidine kinase [Geobacter sp. FRC-32] Length = 427 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 12/75 (16%) Query: 15 AAGEII-----ERPSIAIKELIENSLDA----ESSRVETVIAG-GGKSFFQITDNGFGMT 64 A GE+ ER + L++N++DA S + + G GK +I D+G G+ Sbjct: 312 AEGEVTVTADQERIRQVLVNLLKNAVDAVSEGGS--ITIEMEGKDGKVLIRILDSGPGIP 369 Query: 65 SEEIPMAVQRHCTSK 79 + + T+K Sbjct: 370 EKNLEKIFDIFYTTK 384 >gi|21241857|ref|NP_641439.1| heat shock protein G-like protein [Xanthomonas axonopodis pv. citri str. 306] gi|21107239|gb|AAM35975.1| heat shock protein G homolog [Xanthomonas axonopodis pv. citri str. 306] Length = 203 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 4/47 (8%) Query: 23 PSIAIKELIENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEI 68 P+ + E++ N+ DA++ V + GK +TD+GFGMT+++I Sbjct: 48 PA-VLTEMVANAWDADAKEVRIDVDLKAGK--IVVTDDGFGMTAKDI 91 >gi|85706635|ref|ZP_01037727.1| hypothetical protein ROS217_07789 [Roseovarius sp. 217] gi|85668693|gb|EAQ23562.1| hypothetical protein ROS217_07789 [Roseovarius sp. 217] Length = 500 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Query: 30 LIENSLDAESSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQR 74 L++NS+ A S+ + + G +S+ +I D+G GM E + A R Sbjct: 31 LVDNSITANSTAIAIHLEWAGPESWVKIVDDGEGMDDEALE-AGMR 75 >gi|312885199|ref|ZP_07744878.1| DNA topoisomerase IV subunit B [Vibrio caribbenthicus ATCC BAA-2122] gi|309367139|gb|EFP94712.1| DNA topoisomerase IV subunit B [Vibrio caribbenthicus ATCC BAA-2122] Length = 626 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 76/209 (36%), Gaps = 31/209 (14%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE---------- 66 ERP+ +E+I+NS+D A + ++ ++ ++ D+G GM + Sbjct: 30 ERPNHLAQEVIDNSVDEALAGHAKKIRVILHED--QSLEVVDDGRGMPVDIHPEKGISGV 87 Query: 67 EIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAI 123 E+ + + H K S+D + G G + + A+S + + + + Sbjct: 88 EL-IMTKLHAGGKFSNDNYK-FSGGLHGVGISVVNALSRRVEVTVKRDGQVHEIAFEGGD 145 Query: 124 SGEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + ++S N GT V + S + + + + +R A+ P + Sbjct: 146 AVTELSVTGTCGMRNTGTSVHFW-------PDAKYFDSPKFSSLRLVNNLRAKAVLCPGL 198 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQ 211 FS + + + +++ Sbjct: 199 EIIFS--DKVNNEEHKWFYEDGLKDYLAE 225 >gi|29649150|gb|AAO86864.1| DNA gyrase subunit B [Mesoplasma syrphidae] Length = 550 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 15/73 (20%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT---SEE-----IPMAVQR-H 75 E+++NS+D A ++ + VI G + DNG G+ E+ + + + H Sbjct: 17 EILDNSIDEAMAGEANTISVVITKEG--EVIVEDNGRGIPVGIQEDSGKSALELVFTQLH 74 Query: 76 CTSKISDDFSNIH 88 K D I Sbjct: 75 AGGKFDSDSYKIS 87 >gi|152973859|ref|YP_001373376.1| DNA gyrase subunit B [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022611|gb|ABS20381.1| DNA gyrase, B subunit [Bacillus cytotoxicus NVH 391-98] Length = 640 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + VI ++TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVVIEED--DSIRVTDNGRGIP 84 >gi|148550627|ref|YP_001260066.1| hypothetical protein Swit_5188 [Sphingomonas wittichii RW1] gi|148503046|gb|ABQ71299.1| hypothetical protein Swit_5188 [Sphingomonas wittichii RW1] Length = 553 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 21/137 (15%) Query: 29 ELIENSLDAESSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDF--- 84 ELI+NS A ++ ++ +A G+S+ I D+G G+ + +A+ R S D+ Sbjct: 33 ELIQNSRRAGATVIDLDVAEADGQSWLVIADDGAGIADPAVILALGR---SGWDDNIARR 89 Query: 85 SNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ-----IAISGEKISSVRPVAMNPG 139 + G + S+ H+ + S P G +V P G Sbjct: 90 EDPAGMG-----VFSLAG-RHVEIRSCPRGPGEGWAITIGPDHWESGAPIAVAPCDHGFG 143 Query: 140 TIVEV---RDLFFTIPA 153 T + + D + A Sbjct: 144 TAIRLLLDDDCTRNLEA 160 >gi|83942489|ref|ZP_00954950.1| C4-dicarboxylate transport sensor protein DctB, putative [Sulfitobacter sp. EE-36] gi|83846582|gb|EAP84458.1| C4-dicarboxylate transport sensor protein DctB, putative [Sulfitobacter sp. EE-36] Length = 586 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 23/108 (21%) Query: 11 INQIAAGEIIE------RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITD 58 IN+I E ++ R + L+ N+LDA ++ VE +++ G + + D Sbjct: 457 INRILPAEPVQVMGDRMRIEQVLVNLLRNALDA--TKSERNPTVEIILSAGETATLTVRD 514 Query: 59 NGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHL 106 NG G+ E++ + T+K D + G A+ S G VS L Sbjct: 515 NGPGI--EDLDSLFEPFYTTKQPGDGVGL------GLAISS-GIVSDL 553 >gi|330981497|gb|EGH79600.1| sensor histidine kinase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 585 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Query: 30 LIENSLDA----ESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N+LDA S +E I + DNG G+ +E +P T+K Sbjct: 485 LLRNALDAMRECRSRHLEVRIDAVDNYWRLSVRDNGSGIAAENLPSIFDPFFTTK 539 >gi|330898456|gb|EGH29875.1| sensor histidine kinase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 315 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Query: 30 LIENSLDA----ESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N+LDA S +E I + DNG G+ +E +P T+K Sbjct: 215 LLRNALDAMRECRSRHLEVRIDAVDNYWRLSVRDNGSGIAAENLPSIFDPFFTTK 269 >gi|291438512|ref|ZP_06577902.1| DNA topoisomerase chain B [Streptomyces ghanaensis ATCC 14672] gi|291341407|gb|EFE68363.1| DNA topoisomerase chain B [Streptomyces ghanaensis ATCC 14672] Length = 679 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I GG ++ DNG G+ Sbjct: 60 VQEVVDNSVDEALAGYADTIDVTILDDGG---IRVVDNGRGIP 99 >gi|239930170|ref|ZP_04687123.1| DNA gyrase subunit B [Streptomyces ghanaensis ATCC 14672] Length = 687 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I GG ++ DNG G+ Sbjct: 68 VQEVVDNSVDEALAGYADTIDVTILDDGG---IRVVDNGRGIP 107 >gi|157364483|ref|YP_001471250.1| histidine kinase [Thermotoga lettingae TMO] gi|157315087|gb|ABV34186.1| histidine kinase [Thermotoga lettingae TMO] Length = 179 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 32 ENSLDAESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCT 77 +NS AE+ ++ I F Q+ D+G GM E++ T Sbjct: 15 QNSFKAEAKKITLTIEENKNWFCFQVEDDGCGMDDEQLKTVFDPFYT 61 >gi|115381156|gb|ABI96227.1| DNA gyrase subunit B [Mesoplasma seiffertii] Length = 553 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 15/73 (20%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT---SEE-----IPMAVQR-H 75 E+++NS+D A ++ + I G + DNG G+ E+ + + + H Sbjct: 14 EILDNSIDEAMAGEANTISVTITKEG--EVIVEDNGRGIPVGIQEDSGKSALELVFTQLH 71 Query: 76 CTSKISDDFSNIH 88 K D I Sbjct: 72 AGGKFDSDSYKIS 84 >gi|34304599|gb|AAQ63405.1| DNA gyrase subunit B [Mesoplasma seiffertii] Length = 531 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 15/73 (20%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT---SEE-----IPMAVQR-H 75 E+++NS+D A ++ + I G + DNG G+ E+ + + + H Sbjct: 9 EILDNSIDEAMAGEANTISVTITKEG--EVIVEDNGRGIPVGIQEDSGKSALELVFTQLH 66 Query: 76 CTSKISDDFSNIH 88 K D I Sbjct: 67 AGGKFDSDSYKIS 79 >gi|327398178|ref|YP_004339047.1| DNA gyrase subunit B [Hippea maritima DSM 10411] gi|327180807|gb|AEA32988.1| DNA gyrase, B subunit [Hippea maritima DSM 10411] Length = 787 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 6/54 (11%) Query: 17 GEIIERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 G +E + E+++NS+D A + I + + DNG G+ + Sbjct: 28 GTSVEGLHHLVYEVVDNSIDEAMAGYCDTINVYINED--NSITVEDNGRGIPVD 79 >gi|330937710|gb|EGH41608.1| sensor histidine kinase [Pseudomonas syringae pv. pisi str. 1704B] Length = 585 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Query: 30 LIENSLDA----ESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N+LDA S +E I + DNG G+ +E +P + T+K Sbjct: 485 LLRNALDAMRDCRSRHLEVRIDAVDNYWRLSVRDNGSGIAAENLPSIFDQFFTTK 539 >gi|330507582|ref|YP_004384010.1| DNA topoisomerase VI subunit B [Methanosaeta concilii GP-6] gi|328928390|gb|AEB68192.1| DNA topoisomerase VI, B subunit [Methanosaeta concilii GP-6] Length = 611 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 12/65 (18%) Query: 25 IAIKELIENSLDA--ESS---RVETVIAGGGKSF-FQITDNGFGMTSEEIPMAV------ 72 +KE ++NSLDA ++ + I G+ F + DNG G+ EEIP Sbjct: 38 TCVKEAVDNSLDACEDAGILPDIFVQIKKSGEYFQVIVEDNGPGIVPEEIPRVFAKLLYG 97 Query: 73 QRHCT 77 R T Sbjct: 98 SRFHT 102 >gi|312958106|ref|ZP_07772629.1| DNA topoisomerase II:ATP-binding region [Pseudomonas fluorescens WH6] gi|311287537|gb|EFQ66095.1| DNA topoisomerase II:ATP-binding region [Pseudomonas fluorescens WH6] Length = 805 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 77/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S +++ Q + G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEELILTVRRSGKIWEQTYVHGVPQEPMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ + K+ +++ IR ++ V +S + + Sbjct: 161 DSETTGTQIH-----FKPSADTFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V E + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTAVNQVFHFNIQREDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|126737571|ref|ZP_01753301.1| sensory histidine protein kinase [Roseobacter sp. SK209-2-6] gi|126720964|gb|EBA17668.1| sensory histidine protein kinase [Roseobacter sp. SK209-2-6] Length = 470 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 7/48 (14%) Query: 30 LIENSL---DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 L+EN++ DA + + + G I+DNG G+ ++ ++ Sbjct: 377 LVENAIRHCDA-ADSISIRVEGP---LLSISDNGPGIPPDQREKVLEP 420 >gi|330814224|ref|YP_004358463.1| topoisomerase IV subunit B [Candidatus Pelagibacter sp. IMCC9063] gi|327487319|gb|AEA81724.1| topoisomerase IV subunit B [Candidatus Pelagibacter sp. IMCC9063] Length = 649 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 58/179 (32%), Gaps = 24/179 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM---------AVQRH 75 E+I+N +D A +S + ++ G + DNG G+ ++ P H Sbjct: 44 EIIDNCMDEVVAGEASEITVILNKNG--SLTVMDNGRGIPIDKHPKKNKSALEVVMTTLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS---HLTLMSRPPQNNTGAQIAISGEKISSVR 132 K +D + G G L + A+S + + + + K++ Sbjct: 102 SGGKFKEDGVYTTSAGLHGVGLSVVNALSSKMKVEVFKKKKIHFQEYSRGKPLNKLAQKG 161 Query: 133 PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKS 191 GT V +P F K I + R A + V + KS Sbjct: 162 TYPSPHGTRVTF------LPDDQIFGKDLIFLPIKIYETCRNKAFLFKGVKIHWECDKS 214 >gi|296100816|ref|YP_003610962.1| hypothetical protein ECL_00447 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055275|gb|ADF60013.1| hypothetical protein ECL_00447 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 808 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 11/76 (14%) Query: 6 LSEKIINQI---AAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 L +II+ I AG A+ ELI NS+DA + V I G S D+G G Sbjct: 7 LDPQIIHHIIYSQAG----SIGKAVIELIMNSVDAGAGAVIIDITPEGFSC---RDDGRG 59 Query: 63 MTS-EEIPMAVQRHCT 77 S +++ R T Sbjct: 60 FASYDDVKRYFGRFGT 75 >gi|238918286|ref|YP_002931800.1| hypothetical protein NT01EI_0323 [Edwardsiella ictaluri 93-146] gi|238867854|gb|ACR67565.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 383 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 19/326 (5%), Positives = 61/326 (18%), Gaps = 5/326 (1%) Query: 110 SRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLIT 169 S + + + + + Sbjct: 9 SGTKNVRCWHCQQWLKNAQCWHCQQWLKNAQCWHCQQWLKNAQCWRCQQRLKNAQRWHCQ 68 Query: 170 DVIRRMAIAYPKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEK 227 ++ + + + + + + + + ++ NA + + Sbjct: 69 QRLKNAQCWHCQQWLKNAQCWHCQQWLKNAQCWHCQQWLKNAQCWHCQQWLKNAQCWHCQ 128 Query: 228 SNEITLQGYTGIPTF-NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVL 286 Q + N + N + + + L + + + Sbjct: 129 QWLKNAQCWHCQQWLKNAQCWHCQQWLKNAQCWRCQQRLKNAQCWHCQQRLKNAQCWHCQ 188 Query: 287 LLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFH 346 + Q K+ + ++N Q+ + K Sbjct: 189 QW-LKNAQCWHCQQWLKNAQCWHCQQWLKNAQCWRCQQRLKNAQCWHCQQWLKNAQCWHC 247 Query: 347 QDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQL 406 Q L N Q Q+ + ++ + + Sbjct: 248 QQWLKNAQCWHCQQWLKNAQ-CWRCQQRLKNAQCWHCQQWLKNAQCWHCQQWLKNAQCWR 306 Query: 407 GIACAQIHQNYIISQTTDGLVIVDQH 432 + Q + Q Sbjct: 307 CQQRLKNAQCWHCQQRLKNAQCWHCQ 332 Score = 44.3 bits (103), Expect = 0.067, Method: Composition-based stats. Identities = 10/218 (4%), Positives = 43/218 (19%), Gaps = 4/218 (1%) Query: 113 PQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 + + + + + + Sbjct: 120 KNAQCWHCQQWLKNAQCWHCQQWLKNAQCWHCQQWLKNAQCWRCQQRLKNAQCWHCQQRL 179 Query: 173 RRMAIAYPKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEKSNE 230 + + + + + + + + + + NA + + Sbjct: 180 KNAQCWHCQQWLKNAQCWHCQQWLKNAQCWHCQQWLKNAQCWRCQQRLKNAQCWHCQQWL 239 Query: 231 ITLQGYTGIPTF-NRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLE 289 Q + N + N + + + L + + + Sbjct: 240 KNAQCWHCQQWLKNAQCWHCQQWLKNAQCWRCQQRLKNAQCWHCQQWLKNAQCWHCQQW- 298 Query: 290 IDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN 327 + Q K+ + ++N Q+ + Sbjct: 299 LKNAQCWRCQQRLKNAQCWHCQQRLKNAQCWHCQQWLK 336 Score = 39.3 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 8/190 (4%), Positives = 37/190 (19%), Gaps = 11/190 (5%) Query: 111 RPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITD 170 R + + + + + Sbjct: 178 RLKNAQCWHCQQWLKNAQCWHCQQWLKNAQCWHCQQWLKNAQCWRCQQRLKNAQCWHCQQ 237 Query: 171 VIRRMAIAYPKVSFTFSTIKSNRYKMN--FQSTNGNFPERISQVIGEDFINNAVELNEKS 228 ++ + + + + + + + ++ NA + + Sbjct: 238 WLKNAQCWHCQQWLKNAQCWHCQQWLKNAQCWRCQQRLKNAQCWHCQQWLKNAQCWHCQQ 297 Query: 229 NEITLQGYTGIPTF-NRGNANQFYVFINGRTVQDKFILSTIRTAYAE--------TIPLG 279 Q + N + N + + L + + + + + Sbjct: 298 WLKNAQCWRCQQRLKNAQCWHCQQRLKNAQCWHCQQWLKNAQCWHCQQRLKNVLCLLAMD 357 Query: 280 RYPVVVLLLE 289 + L + Sbjct: 358 KSKFHHLAIW 367 >gi|119503660|ref|ZP_01625743.1| PAS/PAC sensor signal transduction histidine kinase [marine gamma proteobacterium HTCC2080] gi|119460722|gb|EAW41814.1| PAS/PAC sensor signal transduction histidine kinase [marine gamma proteobacterium HTCC2080] Length = 391 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 4/52 (7%) Query: 30 LIENSLDAESS--RVET--VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 LI N+LDA ++ + I + QI D G G+ +E I T Sbjct: 287 LITNALDASATQPNITISSRIRNNRLAVIQIADRGCGIPAEAIDRIFDPFFT 338 >gi|307293240|ref|ZP_07573086.1| integral membrane sensor signal transduction histidine kinase [Sphingobium chlorophenolicum L-1] gi|306881306|gb|EFN12522.1| integral membrane sensor signal transduction histidine kinase [Sphingobium chlorophenolicum L-1] Length = 688 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 10/76 (13%) Query: 14 IAAG---EIIERPSIA---IKELIENSLDAES--SRVETVIAGGGKS-FFQITDNGFGMT 64 I AG +++ P+ + L++N++DA + VE ++ G+ + D G GMT Sbjct: 563 IVAGDAPQVLADPARVEQIVIHLLQNAIDASAPDDVVELRLSDDGRDALLDVIDQGRGMT 622 Query: 65 SEEIPM-AVQRHCTSK 79 +E I + +SK Sbjct: 623 AEFIRRELFKPFSSSK 638 >gi|302344381|ref|YP_003808910.1| integral membrane sensor signal transduction histidine kinase [Desulfarculus baarsii DSM 2075] gi|301640994|gb|ADK86316.1| integral membrane sensor signal transduction histidine kinase [Desulfarculus baarsii DSM 2075] Length = 568 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 9/59 (15%) Query: 30 LIENSLDA-----ESS----RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI N++DA +S + + G G++ ++DNG G++ E + T+K Sbjct: 466 LINNAMDAAIARHGASGGRVELRVGVDGEGQARLSVSDNGVGISEENLRRIFTPFFTTK 524 >gi|332188286|ref|ZP_08390013.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Sphingomonas sp. S17] gi|332011682|gb|EGI53760.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Sphingomonas sp. S17] Length = 696 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%) Query: 26 AIKELIENSLDAESSRVETVIAGGGK---SFFQITDNGFGMT 64 A+ EL++N+ DA++SRVE +G + I D+G GMT Sbjct: 36 ALVELVKNAFDADASRVEVRFSGADVAAPTSILIEDDGIGMT 77 Score = 42.3 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 18/71 (25%) Query: 23 PSIAIKELIENSL-----------DAESSRVETVIA---GGGKSFFQITDNGFGMTSEEI 68 S + L++N+ DA R+ + G +++DNG G++ + Sbjct: 586 LSQVVANLVDNATYWTAANGGDGKDAG--RIIVHVEPIPDG--FVVRVSDNGKGVSEADR 641 Query: 69 PMAVQRHCTSK 79 + + + + K Sbjct: 642 ELIFEPYFSQK 652 >gi|251792940|ref|YP_003007666.1| DNA topoisomerase IV subunit B [Aggregatibacter aphrophilus NJ8700] gi|247534333|gb|ACS97579.1| DNA topoisomerase IV, B subunit [Aggregatibacter aphrophilus NJ8700] Length = 632 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A +S++E ++ ++ DNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFASKIEVILHKN--QSIEVIDNGRGMPVD 77 >gi|242372598|ref|ZP_04818172.1| DNA gyrase subunit B [Staphylococcus epidermidis M23864:W1] gi|242349653|gb|EES41254.1| DNA gyrase subunit B [Staphylococcus epidermidis M23864:W1] Length = 643 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 26/42 (61%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + ++E +I ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYADQIEVIIEKD--NWIKVTDNGRGIPVD 89 >gi|329116682|ref|ZP_08245399.1| DNA gyrase, B subunit [Streptococcus parauberis NCFD 2020] gi|326907087|gb|EGE54001.1| DNA gyrase, B subunit [Streptococcus parauberis NCFD 2020] Length = 650 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIEVYIEED--NSITVVDDGRGIPVD 90 >gi|322688196|ref|YP_004207930.1| DNA gyrase subunit B [Bifidobacterium longum subsp. infantis 157F] gi|320459532|dbj|BAJ70152.1| DNA gyrase subunit B [Bifidobacterium longum subsp. infantis 157F] Length = 696 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G ++ D+G G+ +E+P Sbjct: 71 VYEIVDNSVDEALAGYASHIEITILPDNG---IRVVDDGRGIPVDEVP 115 >gi|322690198|ref|YP_004219768.1| DNA gyrase subunit B [Bifidobacterium longum subsp. longum JCM 1217] gi|320455054|dbj|BAJ65676.1| DNA gyrase subunit B [Bifidobacterium longum subsp. longum JCM 1217] Length = 696 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G ++ D+G G+ +E+P Sbjct: 71 VYEIVDNSVDEALAGYASHIEITILPDNG---IRVVDDGRGIPVDEVP 115 >gi|317482363|ref|ZP_07941383.1| DNA gyrase, subunit B [Bifidobacterium sp. 12_1_47BFAA] gi|316916243|gb|EFV37645.1| DNA gyrase, subunit B [Bifidobacterium sp. 12_1_47BFAA] Length = 712 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G ++ D+G G+ +E+P Sbjct: 87 VYEIVDNSVDEALAGYASHIEITILPDNG---IRVVDDGRGIPVDEVP 131 >gi|315659991|ref|ZP_07912849.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus lugdunensis M23590] gi|315494892|gb|EFU83229.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Staphylococcus lugdunensis M23590] Length = 644 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 26/42 (61%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + ++E +I ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYADQIEVIIEKD--NWIKVTDNGRGIPVD 89 >gi|312133628|ref|YP_004000967.1| gyrb [Bifidobacterium longum subsp. longum BBMN68] gi|311772886|gb|ADQ02374.1| GyrB [Bifidobacterium longum subsp. longum BBMN68] Length = 696 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G ++ D+G G+ +E+P Sbjct: 71 VYEIVDNSVDEALAGYASHIEITILPDNG---IRVVDDGRGIPVDEVP 115 >gi|227547507|ref|ZP_03977556.1| DNA topoisomerase (ATP-hydrolyzing) [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212022|gb|EEI79918.1| DNA topoisomerase (ATP-hydrolyzing) [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 712 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G ++ D+G G+ +E+P Sbjct: 87 VYEIVDNSVDEALAGYASHIEITILPDNG---IRVVDDGRGIPVDEVP 131 >gi|23465218|ref|NP_695821.1| DNA gyrase subunit B [Bifidobacterium longum NCC2705] gi|189440294|ref|YP_001955375.1| DNA gyrase subunit B [Bifidobacterium longum DJO10A] gi|239622838|ref|ZP_04665869.1| DNA gyrase subunit B [Bifidobacterium longum subsp. infantis CCUG 52486] gi|23325846|gb|AAN24457.1| DNA gyrase subunit B, novobiocin-sensitive [Bifidobacterium longum NCC2705] gi|189428729|gb|ACD98877.1| Type IIA topoisomerase B subunit [Bifidobacterium longum DJO10A] gi|239514835|gb|EEQ54702.1| DNA gyrase subunit B [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 696 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G ++ D+G G+ +E+P Sbjct: 71 VYEIVDNSVDEALAGYASHIEITILPDNG---IRVVDDGRGIPVDEVP 115 >gi|23335943|ref|ZP_00121174.1| COG0187: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Bifidobacterium longum DJO10A] Length = 712 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G ++ D+G G+ +E+P Sbjct: 87 VYEIVDNSVDEALAGYASHIEITILPDNG---IRVVDDGRGIPVDEVP 131 >gi|23336860|ref|ZP_00121997.1| COG0187: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Bifidobacterium longum DJO10A] Length = 191 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G ++ D+G G+ +E+P Sbjct: 77 VYEIVDNSVDEALAGYASHIEITILPDNG---IRVVDDGRGIPVDEVP 121 >gi|256421284|ref|YP_003121937.1| histidine kinase [Chitinophaga pinensis DSM 2588] gi|256036192|gb|ACU59736.1| histidine kinase [Chitinophaga pinensis DSM 2588] Length = 382 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 3/57 (5%) Query: 26 AIKELIENSLDA--ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 I+ L++N+LDA ++ I + ITDNG G+ + ++K Sbjct: 284 VIENLLKNALDAMEGKGTIDLYIENHPTNIVIDITDNGKGIPKANFEKVFKPGFSTK 340 >gi|159043629|ref|YP_001532423.1| integral membrane sensor signal transduction histidine kinase [Dinoroseobacter shibae DFL 12] gi|157911389|gb|ABV92822.1| integral membrane sensor signal transduction histidine kinase [Dinoroseobacter shibae DFL 12] Length = 585 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 6/62 (9%) Query: 22 RPSIAIKELIENSLDAESSR----VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 R I L+ N++DA + VE + G + + DNG G+T + + T Sbjct: 475 RLEQVIVNLLRNAMDATAGTPNPVVEIDLTTGETARLSVRDNGPGIT--DFEQIFEPFYT 532 Query: 78 SK 79 +K Sbjct: 533 TK 534 >gi|326513192|dbj|BAK06836.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 680 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 6/55 (10%) Query: 23 PSIAIKELIENSLD---AESSRVETV--I-AGGGKSFFQITDNGFGMTSEEIPMA 71 P A+ EL++N++D ++R+ I G + D+G GM + + Sbjct: 112 PFGAVAELLDNAVDEIKTGATRIVVDKIINKRNGSPALLVQDDGGGMDPDSMRRC 166 >gi|289551838|ref|YP_003472742.1| DNA gyrase subunit B [Staphylococcus lugdunensis HKU09-01] gi|289181369|gb|ADC88614.1| DNA gyrase subunit B [Staphylococcus lugdunensis HKU09-01] Length = 640 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 26/42 (61%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + ++E +I ++ ++TDNG G+ + Sbjct: 46 EIVDNSIDEALAGYADQIEVIIEKD--NWIKVTDNGRGIPVD 85 >gi|167839225|ref|ZP_02465952.1| Signal transduction histidine kinase [Burkholderia thailandensis MSMB43] Length = 297 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 11/57 (19%) Query: 30 LIENSL----DAESSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQR----HCT 77 LI+N++ D + + +A G + ++ DNG G+ +E +R H T Sbjct: 200 LIDNAIRYAGD-GA-VITVRVARDGALARLEVIDNGPGIAPDERDAVFERFYRSHAT 254 >gi|300856179|ref|YP_003781163.1| putative sensory transduction histidine kinase [Clostridium ljungdahlii DSM 13528] gi|300436294|gb|ADK16061.1| predicted sensory transduction histidine kinase [Clostridium ljungdahlii DSM 13528] Length = 466 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 33 NSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 NS D + + I K + I DNG GM+ EE+ +R+ Sbjct: 378 NSPD---TEIRVSIKKEDKIYINIEDNGKGMSEEEVKKLFERYY 418 >gi|265755252|ref|ZP_06090022.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263234394|gb|EEZ19984.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 664 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Query: 23 PSIAIKELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 P AI E + N DA+++ V +ITDNG G+ EE+P+ ++ Sbjct: 22 PERAIAEYVWNGFDAKATVVNIDFEIDNAELDTIKNIRITDNGTGICYEELPIKFKKFYE 81 Query: 78 S 78 S Sbjct: 82 S 82 >gi|225574205|ref|ZP_03782815.1| hypothetical protein RUMHYD_02269 [Blautia hydrogenotrophica DSM 10507] gi|225038573|gb|EEG48819.1| hypothetical protein RUMHYD_02269 [Blautia hydrogenotrophica DSM 10507] Length = 408 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 9/59 (15%) Query: 28 KE----LIENSLD---AESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTS 78 KE L++N+L+ + S+ + + ++D+G G+ E+I +R S Sbjct: 304 KEALANLVKNALEHTSSGST-IRITWQNTSLTTRILVSDDGCGIPPEDIHHIFKRFYRS 361 >gi|288561864|gb|ADC53568.1| DNA gyrase subunit beta [Pseudomonas syringae pv. syringae] Length = 722 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 76/240 (31%), Gaps = 23/240 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 20 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 77 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L L++ Q + G ++ V Sbjct: 78 AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIVG 136 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ K+ +++ IR ++ V +S + + Sbjct: 137 ESDSTGTQIH-----FKPSAETFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 191 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V + + + + N N N Sbjct: 192 LFKY--EGGLRAFVEYLNTNKTPVNEVFHFNIQRDDGIGVEIALQWNDSFNENLLCSTNN 249 >gi|297579726|ref|ZP_06941653.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297535372|gb|EFH74206.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 684 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAESSRVE----TV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA S +E ++ + +++DNG G+ E + + Sbjct: 577 QRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEDHQVIVRVSDNGCGIAPELLTTMFEPF 636 Query: 76 CTSK 79 TSK Sbjct: 637 QTSK 640 >gi|157823155|ref|NP_001100234.1| MORC family CW-type zinc finger protein 2B [Rattus norvegicus] gi|149034766|gb|EDL89503.1| rCG29179 [Rattus norvegicus] Length = 1019 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++NS DA+++R++ GG + DNG GM + +Q ++K + + Sbjct: 35 ELVDNSRDADATRIDIYAERREDLQGGFMLCFL-DNGAGMDPNDAISVIQFGKSAKRTPE 93 Query: 84 FSNIHTFG 91 + I +G Sbjct: 94 STQIGRYG 101 >gi|311030764|ref|ZP_07708854.1| PAS/PAC sensor signal transduction histidine kinase [Bacillus sp. m3-13] Length = 594 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 27/61 (44%), Gaps = 5/61 (8%) Query: 20 IERPSIAIKELIENSL----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 ++R + L++N++ D + + + G + D+G G+ E++P +R Sbjct: 478 VDRMEQVMTNLVDNAIRHTADDGTITIHAKLINNGVK-IDVKDSGHGIPEEDLPFVFERF 536 Query: 76 C 76 Sbjct: 537 Y 537 >gi|119776175|ref|YP_928915.1| DNA topoisomerase IV subunit B [Shewanella amazonensis SB2B] gi|119768675|gb|ABM01246.1| DNA topoisomerase IV subunit B [Shewanella amazonensis SB2B] Length = 628 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 79/208 (37%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A +SR++ ++ + ++ D+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHASRIDVILQTD--NSLEVIDDGRGMPVDIHPEEGIPGV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + + H K S+ + G G + + A+S + + R G+ Sbjct: 88 ELILTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSRRVEITVR-RDAQVYDMAFEHGD 145 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 K+ S+ R F+ P+ + S + +++ A+ P + F Sbjct: 146 KVESLTVTGTCGRRNTGTRVHFWPEPS---YFDSPNFSITKLIHLLKAKAVLCPGLRIKF 202 Query: 187 STIKSNRYKMNFQSTNGNFPERISQVIG 214 + +++ + + +G Sbjct: 203 TN--KQTGEVHEWYFEAGLTDYLKSAVG 228 >gi|218961956|ref|YP_001741731.1| Chaperone protein HtpG [Candidatus Cloacamonas acidaminovorans] gi|167730613|emb|CAO81525.1| Chaperone protein HtpG [Candidatus Cloacamonas acidaminovorans] Length = 665 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 74/233 (31%), Gaps = 41/233 (17%) Query: 27 IKELIENSLDAESSR-------------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQ 73 ++ELI NS+DA + R VE + GK ++ D G GMT EEI + Sbjct: 35 LRELISNSVDAIAKRKYADPNYKEEDMKVEVKLDK-GKKTIEVMDTGIGMTVEEIKKYIN 93 Query: 74 RHCTS-------K---ISDDFSNIHTFGFRGEALPSIGAVS-HLTL--MSRPPQNNTGAQ 120 + S K I ++ GF S V+ +T+ +S + Sbjct: 94 QIAFSGAEDFINKYKDIQNNMIGHFGLGF-----YSAFMVADKVTIDSLSCTEGSEPAFW 148 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + GT V V LN +E + N I +++ R P Sbjct: 149 ECDGSTEYIMSKGKRKEIGTTVTVY---------LNEENAEYADPNKIREILERYCNFMP 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 + + + + N E + F + + + Sbjct: 200 YPIMFEGKQVNQKEALWNRKPNEVKDEEYIEFYKNVFHDYMDPVFWIHLNVDF 252 >gi|228989709|ref|ZP_04149691.1| Sensor histidine kinase [Bacillus pseudomycoides DSM 12442] gi|228995908|ref|ZP_04155566.1| Sensor histidine kinase [Bacillus mycoides Rock3-17] gi|229003525|ref|ZP_04161343.1| Sensor histidine kinase [Bacillus mycoides Rock1-4] gi|228757763|gb|EEM06990.1| Sensor histidine kinase [Bacillus mycoides Rock1-4] gi|228763880|gb|EEM12769.1| Sensor histidine kinase [Bacillus mycoides Rock3-17] gi|228770043|gb|EEM18625.1| Sensor histidine kinase [Bacillus pseudomycoides DSM 12442] Length = 535 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 4/65 (6%) Query: 19 IIERPSIAIKELIENSLDA--ES--SRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 II + LI+N+LDA RV+ I K + D G G+ EEI + Sbjct: 423 IIHELITIVGNLIDNALDAVINCQYKRVDISIQYHDKMIITVKDTGVGIRQEEIDKLFVK 482 Query: 75 HCTSK 79 +SK Sbjct: 483 GYSSK 487 >gi|320456980|dbj|BAJ67601.1| DNA gyrase subunit B [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 696 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G ++ D+G G+ +E+P Sbjct: 71 VYEIVDNSVDEALAGYASHIEVSILPDNG---IRVVDDGRGIPVDEVP 115 >gi|213690934|ref|YP_002321520.1| DNA gyrase, B subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522395|gb|ACJ51142.1| DNA gyrase, B subunit [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 709 Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G ++ D+G G+ +E+P Sbjct: 84 VYEIVDNSVDEALAGYASHIEVSILPDNG---IRVVDDGRGIPVDEVP 128 >gi|238018370|ref|ZP_04598796.1| hypothetical protein VEIDISOL_00195 [Veillonella dispar ATCC 17748] gi|237864841|gb|EEP66131.1| hypothetical protein VEIDISOL_00195 [Veillonella dispar ATCC 17748] Length = 471 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 14 IAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAV 72 I A E+ AI L++N++ +S ++ G +TDNG G+ E + Sbjct: 355 IVAHEV--SLRRAITNLVDNAIKFTNSTIDISAKLAGGELVITVTDNGIGIEPENLEHIW 412 Query: 73 QR 74 R Sbjct: 413 DR 414 >gi|255692967|ref|ZP_05416642.1| DNA gyrase, B subunit [Bacteroides finegoldii DSM 17565] gi|260621278|gb|EEX44149.1| DNA gyrase, B subunit [Bacteroides finegoldii DSM 17565] Length = 652 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I + + DNG G+ + Sbjct: 47 VYEIVDNSIDEALAGYCTHIEVTINED--NSITVQDNGRGIPVD 88 >gi|187935003|ref|YP_001885076.1| anti-sigma F factor [Clostridium botulinum B str. Eklund 17B] gi|226732538|sp|B2TLY1|SP2AB_CLOBB RecName: Full=Anti-sigma F factor; AltName: Full=Stage II sporulation protein AB gi|187723156|gb|ACD24377.1| anti-sigma F factor [Clostridium botulinum B str. Eklund 17B] Length = 143 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 22/98 (22%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSL--------DAESSRVETVIAGGGKSFF 54 I +L I++I+ A+ E + NS+ D ++E I G + Sbjct: 28 IAQLDP-TIDEIS------DVKTAVSEAVTNSIIHGYENKED-GVIKIEVEICDGEVT-I 78 Query: 55 QITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGF 92 +ITDNG G+ E+IP ++ TS D GF Sbjct: 79 EITDNGKGI--EDIPKVMEPLYTS--RPDLER-SGMGF 111 >gi|149201722|ref|ZP_01878696.1| two component sensor kinase [Roseovarius sp. TM1035] gi|149144770|gb|EDM32799.1| two component sensor kinase [Roseovarius sp. TM1035] Length = 438 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Query: 30 LIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++D + V + G + F++ D+G G+ E + Sbjct: 349 LVQNAIDHGGTNVVVRVLG---TAFEVEDDGPGIPPTERERVFEPFH 392 >gi|188582500|ref|YP_001925945.1| integral membrane sensor signal transduction histidine kinase [Methylobacterium populi BJ001] gi|179345998|gb|ACB81410.1| integral membrane sensor signal transduction histidine kinase [Methylobacterium populi BJ001] Length = 622 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAESSR----VETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L++N+LDA + R + I G+ ++ DNG G+ Sbjct: 501 RLEQVVVNLLQNALDAVTGRPDPWIAVRIEEAGERVAVEVADNGPGIPEAVRAQVFDPFF 560 Query: 77 TSK 79 T+K Sbjct: 561 TTK 563 >gi|94983855|gb|ABF50632.1| DNA topoisomerase IV subunit B [Entomoplasma freundtii] Length = 554 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 21/40 (52%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ + + G ++DNG G+ Sbjct: 14 EIVDNSIDEALAGYATEINVTMEKNG--SITVSDNGRGVP 51 >gi|28492972|ref|NP_787133.1| DNA gyrase subunit B [Tropheryma whipplei str. Twist] gi|28572180|ref|NP_788960.1| DNA gyrase subunit B [Tropheryma whipplei TW08/27] gi|28410311|emb|CAD66697.1| DNA gyrase subunit B [Tropheryma whipplei TW08/27] gi|28476012|gb|AAO44102.1| DNA gyrase subunit B [Tropheryma whipplei str. Twist] Length = 649 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 + EL++NS+D A +++ I A GG ++TDNG G+ + Sbjct: 43 VYELVDNSVDEALAGYCTKINVAILADGG---VRVTDNGRGIPVD 84 >gi|312138547|ref|YP_004005883.1| chaperone protein htpg [Rhodococcus equi 103S] gi|311887886|emb|CBH47198.1| putative chaperone protein HtpG [Rhodococcus equi 103S] Length = 650 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 65/192 (33%), Gaps = 48/192 (25%) Query: 27 IKELIENSLDA--------------ESSR----VETVIAGGGKSFFQITDNGFGMTSEEI 68 ++EL+ N+ DA E+ +E + ++ + DNG GM+ +E+ Sbjct: 33 LRELVSNASDALDKLKLEAYRDKDLEADTSDLHIELEVDADTRTL-TVRDNGIGMSRDEV 91 Query: 69 PMAVQRHCTS-------KISDDFSNIHT--------FGFRGEALPSIGAVS-HLTLMSRP 112 + S K+ + + GF S V+ +TL++R Sbjct: 92 IDLIGTLAKSGTAELRRKLREAKDAAASEELIGQFGIGF-----YSTFMVADKVTLLTRK 146 Query: 113 PQNNTGAQIAISGEKISSVRPV-AMNPGTIVE-------VRDLFFTIPARLNFLKSEQVE 164 G + SG+ ++ V GT V V D + + + + Sbjct: 147 AGEKHGTRWESSGDATYTIETVDDAPQGTSVTLHLKPEDVEDHLYDYASERKLREIVKRY 206 Query: 165 TNLITDVIRRMA 176 ++ I +R Sbjct: 207 SDFIAYPVRMQV 218 >gi|289167707|ref|YP_003445976.1| DNA gyrase, B subunit [Streptococcus mitis B6] gi|288907274|emb|CBJ22109.1| DNA gyrase, B subunit [Streptococcus mitis B6] Length = 648 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIEVFIEPD--DSITVVDDGRGIPVD 88 >gi|229819267|ref|YP_002880793.1| histidine kinase [Beutenbergia cavernae DSM 12333] gi|229565180|gb|ACQ79031.1| histidine kinase [Beutenbergia cavernae DSM 12333] Length = 397 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Query: 23 PSIAIKELIENSL---DAESSRVETVIA--GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 A++ L++N+L D +RV + G + D G G++++E+P +R Sbjct: 269 LVTALRNLLDNALRYSDRG-TRVSIGVDTADDGMVEIAVVDQGVGISADELPRVFERFY 326 >gi|204931274|ref|ZP_03222034.1| sensor protein ZraS [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204319889|gb|EDZ05096.1| sensor protein ZraS [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 465 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 8/65 (12%) Query: 21 ERPSIAIKELIENSLDA----ESSRVETVIAGGGKSF--FQITDNGFGMTSEEIPMAVQR 74 +R + + L N++ A + G +TDNG G+ +++ Sbjct: 357 DRLTQVLLNLYLNAIHAIGRQG--TITVEAKESGTDRVIITVTDNGKGIAPDQLEAIFTP 414 Query: 75 HCTSK 79 + T+K Sbjct: 415 YFTTK 419 >gi|78707349|gb|ABB46480.1| DNA gyrase subunit B [Acholeplasma granularum] gi|78707351|gb|ABB46481.1| DNA gyrase subunit B [Acholeplasma granularum] gi|78707353|gb|ABB46482.1| DNA gyrase subunit B [Acholeplasma granularum] Length = 587 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I G ++TDNG G+ + Sbjct: 23 EIVDNSIDEALAGYADEINIEILKGNI--VRVTDNGRGIPVD 62 >gi|325284316|ref|YP_004256856.1| hypothetical protein Deipr_2369 [Deinococcus proteolyticus MRP] gi|324316380|gb|ADY27493.1| hypothetical protein Deipr_2369 [Deinococcus proteolyticus MRP] Length = 569 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Query: 27 IKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 ++EL++NSL A +S ++ G S + D+G G+ ++ + R Sbjct: 28 VRELLQNSLRAGASHIQFETTDQGFS---VQDDGHGLEDPQLLLTAAR 72 >gi|296284083|ref|ZP_06862081.1| DNA topoisomerase IV subunit B [Citromicrobium bathyomarinum JL354] Length = 662 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 6/46 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 E+++NS+D A ++R+E + G + I DNG GM +E P Sbjct: 52 EVLDNSMDEAVAGHATRIEVKLEEG--NRLTIADNGRGMPIDEHPK 95 >gi|148974232|ref|ZP_01811765.1| C4-dicarboxylate transport sensor protein, putative [Vibrionales bacterium SWAT-3] gi|145965929|gb|EDK31177.1| C4-dicarboxylate transport sensor protein, putative [Vibrionales bacterium SWAT-3] Length = 687 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDA--ESSRVETVIA---GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N++DA VI+ + ++ DNG G++ +++ + Sbjct: 579 RLRQVLGNLLSNAIDATQNQKTATIVISAHTEQERVIIKVQDNGCGVSEDQLETIFEPFH 638 Query: 77 TSK 79 T+K Sbjct: 639 TNK 641 >gi|220911376|ref|YP_002486685.1| signal transduction histidine kinase regulating citrate/malate metabolism [Arthrobacter chlorophenolicus A6] gi|219858254|gb|ACL38596.1| signal transduction histidine kinase regulating citrate/malate metabolism [Arthrobacter chlorophenolicus A6] Length = 524 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 39/95 (41%), Gaps = 19/95 (20%) Query: 30 LIENSLDA-----ESSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 L++N+ DA +++ V ++ G G+ + DNG G+ ++ ++ T+K Sbjct: 424 LVDNAFDAVSGLPQAT-VRVLVEDGEGQVVVTVRDNGHGVPADAADHIFRQGFTTK---- 478 Query: 84 FSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTG 118 + G RG L +S + R + Sbjct: 479 --DARREGGRGFGLA----LSRVVC--RRSGGDLA 505 >gi|332308317|ref|YP_004436168.1| hypothetical protein Glaag_3975 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175646|gb|AEE24900.1| hypothetical protein Glaag_3975 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 456 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 8/117 (6%) Query: 24 SIAIKELIENSLDAESSRVETVIAGGGKS--FFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 S A+ ++++NSL A + + + G I D+G GM+ +E+ ++ C K Sbjct: 26 SSAVSDILDNSLTANAKNIAIH-SLPGLEEPNLSIVDDGKGMSPDELIHNMKIGC--KDP 82 Query: 82 DDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAM 136 D G G L S LT++S+ A ++I + + Sbjct: 83 SDERLRGDLGRFGSGLKTASFSQARKLTVISKKVGEPICA-AVWDIDRIENENTWCL 138 >gi|297710709|ref|XP_002832012.1| PREDICTED: MORC family CW-type zinc finger protein 4-like isoform 2 [Pongo abelii] Length = 900 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI ELI+N++D + + V + KS TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELIDNAVDPDVSARTVFIDVEEVKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|297710707|ref|XP_002832011.1| PREDICTED: MORC family CW-type zinc finger protein 4-like isoform 1 [Pongo abelii] Length = 937 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI ELI+N++D + + V + KS TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELIDNAVDPDVSARTVFIDVEEVKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|78707345|gb|ABB46478.1| DNA gyrase subunit B [Acholeplasma equifetale] gi|78707347|gb|ABB46479.1| DNA gyrase subunit B [Acholeplasma equifetale] Length = 588 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + +E + + +++DNG G+ + Sbjct: 23 EIVDNSIDEALAGYADHIEIEVLKD--NVIRVSDNGRGIPVD 62 >gi|315639591|ref|ZP_07894731.1| sensor histidine kinase [Enterococcus italicus DSM 15952] gi|315484552|gb|EFU75008.1| sensor histidine kinase [Enterococcus italicus DSM 15952] Length = 576 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 7/59 (11%) Query: 23 PSIAIKELIENSL----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 +K LIEN+L DA + ++ + + + Q+ D G G+ E+ +R Sbjct: 470 LQAILKNLIENALYYSRDA--TTIQILFSQVNQELTIQVKDQGVGIDEEDQKRIFERFY 526 >gi|288919492|ref|ZP_06413823.1| ATPase [Frankia sp. EUN1f] gi|288349095|gb|EFC83341.1| ATPase [Frankia sp. EUN1f] Length = 434 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 71/218 (32%), Gaps = 37/218 (16%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 P+ L++NS+ A ++ V+ VI G I D+G GM+ + A++ S+ S Sbjct: 28 PAAVAD-LVDNSVSAGATHVQVVIRFDGVDSRVLIADDGVGMSENALVEALRFG--SRRS 84 Query: 82 DDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQN---------NTGAQIAISGEKISS 130 + G G L S+ +T+++R + + G + + Sbjct: 85 ---YQENELGRYGLGLKTASLSQGRSVTVVTRRSASADRVFIRELDLGLVEELDEWLVVV 141 Query: 131 VRPV----------AMNPGTIVEVRDLFFTIP--------ARLNFLKSEQVETNLITDVI 172 R GT+V RDL +P AR + + + V Sbjct: 142 PRRSAELDDARELLGAGCGTVVLWRDLDRVLPESRPDGGWARRRLDSYARKTADHLAIVF 201 Query: 173 RRMAIAYPK-VSFTFSTIKSNRYKMNFQSTNGNFPERI 209 R P T S N + + + Sbjct: 202 HRFLEGLPDGRKVTISVNGEKVRPWNPYAPDEEHRREL 239 >gi|254436846|ref|ZP_05050340.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Octadecabacter antarcticus 307] gi|198252292|gb|EDY76606.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Octadecabacter antarcticus 307] Length = 598 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 16/84 (19%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R I L+ N+LDA ++ VE ++A G + + DNG G+ +++ + Sbjct: 476 RLEQVIINLLRNALDA--TKMAAEPSVEILLAQGDVARLSVRDNGTGI--QDLDELFEPF 531 Query: 76 CTSKISDDFSNIHTFGFRGEALPS 99 T+K + D + + G A+ S Sbjct: 532 YTTKQAGDGTGL------GLAISS 549 >gi|329123547|ref|ZP_08252110.1| DNA topoisomerase (ATP-hydrolyzing) ParE [Haemophilus aegyptius ATCC 11116] gi|327470363|gb|EGF15821.1| DNA topoisomerase (ATP-hydrolyzing) ParE [Haemophilus aegyptius ATCC 11116] Length = 632 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++TDNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFATKIEVILHPD--QSIEVTDNGRGMPVD 77 >gi|319776382|ref|YP_004138870.1| DNA topoisomerase IV subunit B [Haemophilus influenzae F3047] gi|317450973|emb|CBY87202.1| DNA topoisomerase IV, subunit B [Haemophilus influenzae F3047] Length = 632 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++TDNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFATKIEVILHPD--QSIEVTDNGRGMPVD 77 >gi|319897148|ref|YP_004135343.1| DNA topoisomerase iv, subunit b [Haemophilus influenzae F3031] gi|317432652|emb|CBY81015.1| DNA topoisomerase IV, subunit B [Haemophilus influenzae F3031] Length = 632 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++TDNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFATKIEVILHPD--QSIEVTDNGRGMPVD 77 >gi|296453192|ref|YP_003660335.1| DNA gyrase subunit B [Bifidobacterium longum subsp. longum JDM301] gi|296182623|gb|ADG99504.1| DNA gyrase, B subunit [Bifidobacterium longum subsp. longum JDM301] Length = 709 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G ++ D+G G+ +E+P Sbjct: 84 VYEIVDNSVDEALAGYASHIEVTILPDNG---IRVVDDGRGIPVDEVP 128 >gi|291517729|emb|CBK71345.1| DNA gyrase subunit B [Bifidobacterium longum subsp. longum F8] Length = 712 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G ++ D+G G+ +E+P Sbjct: 87 VYEIVDNSVDEALAGYASHIEVTILPDNG---IRVVDDGRGIPVDEVP 131 >gi|260583321|ref|ZP_05851095.1| DNA topoisomerase IV, B subunit [Haemophilus influenzae NT127] gi|260093634|gb|EEW77548.1| DNA topoisomerase IV, B subunit [Haemophilus influenzae NT127] Length = 632 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++TDNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFATKIEVILHPD--QSIEVTDNGRGMPVD 77 >gi|291455697|ref|ZP_06595087.1| DNA gyrase, B subunit [Bifidobacterium breve DSM 20213] gi|291382625|gb|EFE90143.1| DNA gyrase, B subunit [Bifidobacterium breve DSM 20213] Length = 712 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G ++ D+G G+ +E+P Sbjct: 87 VYEIVDNSVDEALAGYASHIEVTILPDNG---IRVVDDGRGIPVDEVP 131 >gi|261338542|ref|ZP_05966426.1| DNA gyrase, B subunit [Bifidobacterium gallicum DSM 20093] gi|270276563|gb|EFA22417.1| DNA gyrase, B subunit [Bifidobacterium gallicum DSM 20093] Length = 706 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G ++ D+G G+ +E+P Sbjct: 82 VYEIVDNSVDEALAGYASHIEVTILPDNG---IRVVDDGRGIPVDEVP 126 >gi|297583784|ref|YP_003699564.1| integral membrane sensor signal transduction histidine kinase [Bacillus selenitireducens MLS10] gi|297142241|gb|ADH98998.1| integral membrane sensor signal transduction histidine kinase [Bacillus selenitireducens MLS10] Length = 472 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 22/98 (22%) Query: 1 MKIRKLSEKII---NQIAA------------GEIIE----RPSIAIKELIENSLDAE--S 39 M + +L E + N IA G IIE R I LIEN++ Sbjct: 320 MPLAQLVEDVCERMNLIAEKDDVTVNLELDYGIIIEGDESRLEQVISNLIENAIRYGKQG 379 Query: 40 SRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHC 76 +++ + GK+ ++ D G GM E + +R Sbjct: 380 KQIDVSLEQADGKAVLRVRDYGAGMPPETLTRLTERFY 417 >gi|145634903|ref|ZP_01790610.1| DNA topoisomerase IV subunit B [Haemophilus influenzae PittAA] gi|145267769|gb|EDK07766.1| DNA topoisomerase IV subunit B [Haemophilus influenzae PittAA] Length = 632 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++TDNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFATKIEVILHPD--QSIEVTDNGRGMPVD 77 >gi|145642081|ref|ZP_01797652.1| DNA topoisomerase IV subunit B [Haemophilus influenzae R3021] gi|145273261|gb|EDK13136.1| DNA topoisomerase IV subunit B [Haemophilus influenzae 22.4-21] Length = 430 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++TDNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFATKIEVILHPD--QSIEVTDNGRGMPVD 77 >gi|145631948|ref|ZP_01787702.1| DNA topoisomerase IV subunit B [Haemophilus influenzae R3021] gi|144982399|gb|EDJ89973.1| DNA topoisomerase IV subunit B [Haemophilus influenzae R3021] Length = 632 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++TDNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFATKIEVILHPD--QSIEVTDNGRGMPVD 77 >gi|145629698|ref|ZP_01785494.1| DNA topoisomerase IV subunit B [Haemophilus influenzae 22.1-21] gi|144978035|gb|EDJ87814.1| DNA topoisomerase IV subunit B [Haemophilus influenzae 22.1-21] Length = 617 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++TDNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFATKIEVILHPD--QSIEVTDNGRGMPVD 77 >gi|34305633|gb|AAQ63623.1| Tmp4 [Bifidobacterium breve UCC2003] Length = 592 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I G ++ D+G G+ +E+P Sbjct: 87 VYEIVDNSVDEALAGYASHIEVTILPDNG---IRVVDDGRGIPVDEVP 131 >gi|16273428|ref|NP_439677.1| DNA topoisomerase IV subunit B [Haemophilus influenzae Rd KW20] gi|260580311|ref|ZP_05848140.1| DNA topoisomerase IV, B subunit [Haemophilus influenzae RdAW] gi|1172018|sp|P43703|PARE_HAEIN RecName: Full=DNA topoisomerase 4 subunit B; AltName: Full=Topoisomerase IV subunit B gi|1574369|gb|AAC23174.1| topoisomerase IV, subunit B (parE) [Haemophilus influenzae Rd KW20] gi|260092988|gb|EEW76922.1| DNA topoisomerase IV, B subunit [Haemophilus influenzae RdAW] Length = 632 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++TDNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFATKIEVILHPD--QSIEVTDNGRGMPVD 77 >gi|145639071|ref|ZP_01794679.1| DNA topoisomerase IV subunit B [Haemophilus influenzae PittII] gi|145272043|gb|EDK11952.1| DNA topoisomerase IV subunit B [Haemophilus influenzae PittII] gi|309751023|gb|ADO81007.1| DNA topoisomerase IV, subunit B [Haemophilus influenzae R2866] Length = 632 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++TDNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFATKIEVILHPD--QSIEVTDNGRGMPVD 77 >gi|296447820|ref|ZP_06889733.1| multi-sensor hybrid histidine kinase [Methylosinus trichosporium OB3b] gi|296254679|gb|EFH01793.1| multi-sensor hybrid histidine kinase [Methylosinus trichosporium OB3b] Length = 665 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 7/62 (11%) Query: 22 RPSIAIKELIENS----LDAESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHC 76 R + AI L++N+ LD R++ ++ G ++ D+G G+ +E +P + Sbjct: 417 RLAQAIANLLDNAAKYTLDGG--RIDIMLKREGAEAVVEVRDDGVGIPAEMLPHMFELFA 474 Query: 77 TS 78 S Sbjct: 475 RS 476 >gi|323487683|ref|ZP_08092941.1| DNA gyrase subunit B [Planococcus donghaensis MPA1U2] gi|323398417|gb|EGA91205.1| DNA gyrase subunit B [Planococcus donghaensis MPA1U2] Length = 642 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 21/40 (52%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I ++ ++ DNG G+ Sbjct: 48 EIVDNSIDEALAGHCTEIRVSIEPD--NWIRVEDNGRGIP 85 >gi|126435827|ref|YP_001071518.1| signal transduction histidine kinase regulating citrate/malate metabolism [Mycobacterium sp. JLS] gi|126235627|gb|ABN99027.1| signal transduction histidine kinase regulating citrate/malate metabolism [Mycobacterium sp. JLS] Length = 539 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 15/88 (17%) Query: 15 AAGEIIERPSIAIKELIENSLD----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 AA ++I LI+N++D + ++RV I + D G G+ Sbjct: 425 AATDVITLLGN----LIDNAVDVSVGSGAARVSVRIDDADGLSITVADTGPGVPEHLREE 480 Query: 71 AVQRHCTSKISDDFSNIHTFGFRGEALP 98 R TSK + G RG L Sbjct: 481 IFARGVTSK-------PESPGGRGIGLA 501 >gi|108800204|ref|YP_640401.1| signal transduction histidine kinase regulating citrate/malate metabolism [Mycobacterium sp. MCS] gi|119869332|ref|YP_939284.1| signal transduction histidine kinase regulating citrate/malate metabolism [Mycobacterium sp. KMS] gi|108770623|gb|ABG09345.1| signal transduction histidine kinase regulating citrate/malate metabolism [Mycobacterium sp. MCS] gi|119695421|gb|ABL92494.1| signal transduction histidine kinase regulating citrate/malate metabolism [Mycobacterium sp. KMS] Length = 539 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 15/88 (17%) Query: 15 AAGEIIERPSIAIKELIENSLD----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 AA ++I LI+N++D + ++RV I + D G G+ Sbjct: 425 AATDVITLLGN----LIDNAVDVSVGSGAARVSVRIDDADGLSITVADTGPGVPEHLREE 480 Query: 71 AVQRHCTSKISDDFSNIHTFGFRGEALP 98 R TSK + G RG L Sbjct: 481 IFARGVTSK-------PESPGGRGIGLA 501 >gi|126650076|ref|ZP_01722309.1| Sensory transduction histidine kinase [Bacillus sp. B14905] gi|126593248|gb|EAZ87210.1| Sensory transduction histidine kinase [Bacillus sp. B14905] Length = 480 Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 5/58 (8%) Query: 22 RPSIAIKELIENSL--DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R I L+ N+L + + I + Q+ DNG GM E++P +R+ Sbjct: 370 RLEQVISNLVTNALKHTSNGDTITITTYIEDQTL-YIQVIDNGNGMLPEDMPFIFERY 426 >gi|325285912|ref|YP_004261702.1| integral membrane sensor signal transduction histidine kinase [Cellulophaga lytica DSM 7489] gi|324321366|gb|ADY28831.1| integral membrane sensor signal transduction histidine kinase [Cellulophaga lytica DSM 7489] Length = 382 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 3/53 (5%) Query: 30 LIENSLDA--ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N +DA + I G ++D G G+ TSK Sbjct: 287 LVKNGIDAMRGKGHIAIEIIPAGSFVNILVSDTGHGIPKGNYASIFNPGHTSK 339 >gi|259909654|ref|YP_002650010.1| hypothetical protein EpC_30290 [Erwinia pyrifoliae Ep1/96] gi|224965276|emb|CAX56808.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96] gi|261863699|gb|ACY01310.1| unknown [Erwinia pyrifoliae] gi|283479731|emb|CAY75647.1| hypothetical protein EPYR_03267 [Erwinia pyrifoliae DSM 12163] Length = 726 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 32/97 (32%), Positives = 40/97 (41%), Gaps = 24/97 (24%) Query: 6 LSEKIINQI---AAGEIIERPSIAIKELIE---NSLDAESSRVETVIAGGGKSFFQITDN 59 L +II+ I AG K LIE NS+DA +S V I G S D+ Sbjct: 7 LDPQIIHHIIYSQAG-------SIGKALIELMMNSVDAGASMVSIDITPEGFSC---RDD 56 Query: 60 GFGMTS-EEIPMAVQRHCT-SKISDDFSNIHTFG-FR 93 G G S E++ R T K D T+G FR Sbjct: 57 GRGFASYEDVKRYFGRFGTPHKEGD-----ATYGRFR 88 >gi|312897423|ref|ZP_07756847.1| DNA gyrase, B subunit [Megasphaera micronuciformis F0359] gi|310621484|gb|EFQ05020.1| DNA gyrase, B subunit [Megasphaera micronuciformis F0359] Length = 647 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + +E I + + DNG G+ Sbjct: 53 VYEVVDNSIDEALAGYCTHIEVTIEED--NSITVVDNGRGIP 92 >gi|149202494|ref|ZP_01879466.1| C4-dicarboxylate transport sensor protein DctB, putative [Roseovarius sp. TM1035] gi|149143776|gb|EDM31810.1| C4-dicarboxylate transport sensor protein DctB, putative [Roseovarius sp. TM1035] Length = 586 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 10/64 (15%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R I L+ N++DA + ++ ++A G + + DNG G+ + + Sbjct: 476 RVEQVIVNLLRNAIDA--TNTVPDAIIDILLAAGETAVLTVRDNGEGIG--DFKNLFEPF 531 Query: 76 CTSK 79 T+K Sbjct: 532 YTTK 535 >gi|134098150|ref|YP_001103811.1| ATPase [Saccharopolyspora erythraea NRRL 2338] gi|291007571|ref|ZP_06565544.1| ATPase [Saccharopolyspora erythraea NRRL 2338] gi|133910773|emb|CAM00886.1| ATPase [Saccharopolyspora erythraea NRRL 2338] Length = 500 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 17/104 (16%) Query: 21 ERPSIAIKELIENSLDAESSRVETVI--AGGGKSFFQITDNGFGMTS---EEIPMAVQRH 75 + A+ +L++NS+DA + V G + D+G GM++ + R Sbjct: 30 HSLATALSDLVDNSVDAGADHVLIRFIRHRGRICSLYVVDDGRGMSAAAIDNAMTIGGRR 89 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSH---LTLMSRPPQNN 116 + G G L S + S LT+ SR Sbjct: 90 T--------YHERDLGHFGMGLQS-ASFSQARTLTVFSRAVGCE 124 >gi|254373469|ref|ZP_04988957.1| topoisomerase IV [Francisella tularensis subsp. novicida GA99-3549] gi|151571195|gb|EDN36849.1| topoisomerase IV [Francisella novicida GA99-3549] Length = 627 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E P+ I+E+I+NS+D A +S++ + + ++ D+G GM + Sbjct: 29 ENPNHLIQEIIDNSVDEVLAGFASKINITLYED--NSIEVADDGRGMPVD 76 >gi|153008163|ref|YP_001369378.1| integral membrane sensor signal transduction histidine kinase [Ochrobactrum anthropi ATCC 49188] gi|151560051|gb|ABS13549.1| integral membrane sensor signal transduction histidine kinase [Ochrobactrum anthropi ATCC 49188] Length = 605 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ ++G G + DNG G+ E I +R Sbjct: 489 RLGQVVSNLIENARSFVPDDTG--RIVVSLSGEGSRLRVLVEDNGPGIPIENIERIFERF 546 Query: 76 CT 77 T Sbjct: 547 YT 548 >gi|149923184|ref|ZP_01911597.1| hypothetical protein PPSIR1_34153 [Plesiocystis pacifica SIR-1] gi|149815958|gb|EDM75474.1| hypothetical protein PPSIR1_34153 [Plesiocystis pacifica SIR-1] Length = 594 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 18/70 (25%) Query: 15 AAGEI----------IERPSIAIKELIENSLDAESSRVETVIA---GGGKS-----FFQI 56 AA E+ E P ++EL++N++DA S RVE + G+ + Sbjct: 2 AASEVDALLERLVAQFESPYDFLRELVQNAMDAGSDRVEVSLETHPAAGEGDEVVFELTV 61 Query: 57 TDNGFGMTSE 66 D G GM Sbjct: 62 VDTGAGMDEA 71 >gi|56707333|ref|YP_169229.1| DNA topoisomerase IV subunit B [Francisella tularensis subsp. tularensis SCHU S4] gi|110669803|ref|YP_666360.1| DNA topoisomerase IV subunit B [Francisella tularensis subsp. tularensis FSC198] gi|224456396|ref|ZP_03664869.1| DNA topoisomerase IV subunit B [Francisella tularensis subsp. tularensis MA00-2987] gi|254370010|ref|ZP_04986017.1| DNA topoisomerase [Francisella tularensis subsp. tularensis FSC033] gi|254874168|ref|ZP_05246878.1| topoisomerase IV [Francisella tularensis subsp. tularensis MA00-2987] gi|56603825|emb|CAG44796.1| Topoisomerase IV, subunit B [Francisella tularensis subsp. tularensis SCHU S4] gi|110320136|emb|CAL08179.1| Topoisomerase IV, subunit B [Francisella tularensis subsp. tularensis FSC198] gi|151568255|gb|EDN33909.1| DNA topoisomerase [Francisella tularensis subsp. tularensis FSC033] gi|254840167|gb|EET18603.1| topoisomerase IV [Francisella tularensis subsp. tularensis MA00-2987] gi|282158458|gb|ADA77849.1| DNA topoisomerase IV subunit B [Francisella tularensis subsp. tularensis NE061598] Length = 627 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E P+ I+E+I+NS+D A +S++ + + ++ D+G GM + Sbjct: 29 ENPNHLIQEIIDNSVDEVLAGFASKINITLYED--NSIEVADDGRGMPVD 76 >gi|39933446|ref|NP_945722.1| aminoacyl-tRNA synthetase [Rhodopseudomonas palustris CGA009] gi|39647292|emb|CAE25813.1| Aminoacyl-tRNA synthetase, class I:ATP-binding region, ATPase-like [Rhodopseudomonas palustris CGA009] Length = 867 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 12/86 (13%) Query: 20 IERPSIAIKELIENSLDAES----------SRVETVIAG--GGKSFFQITDNGFGMTSEE 67 I+ ++ ++EL++N+ DA + R+ +A S ++ D+G GM+ Sbjct: 384 IDEFAVVMRELLQNARDAIAARRSLTPEFSGRISVKVARRSDTHSTIEVRDDGVGMSERT 443 Query: 68 IPMAVQRHCTSKISDDFSNIHTFGFR 93 + ++ TS + D G R Sbjct: 444 MTTSLLDFGTSFWASDLVKSEFPGLR 469 >gi|332184662|gb|AEE26916.1| Topoisomerase IV subunit B [Francisella cf. novicida 3523] Length = 627 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E P+ I+E+I+NS+D A +S++ + + ++ D+G GM + Sbjct: 29 ENPNHLIQEIIDNSVDEVLAGFASKINITLYED--NSIEVADDGRGMPVD 76 >gi|323705855|ref|ZP_08117427.1| DNA topoisomerase IV, B subunit [Thermoanaerobacterium xylanolyticum LX-11] gi|323534851|gb|EGB24630.1| DNA topoisomerase IV, B subunit [Thermoanaerobacterium xylanolyticum LX-11] Length = 633 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 45/103 (43%), Gaps = 19/103 (18%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE----------EIPMAV 72 + E+++NS+D A ++ +I + + D+G G+ ++ E+ + V Sbjct: 41 VYEIVDNSIDEALAGYCKNIDVIIHKD--NSVSVIDDGRGIPTDIHPQTGKSGVEVALTV 98 Query: 73 QRHCTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQ 114 H K ++D + + G G L + A+S L ++ + Sbjct: 99 L-HAGGKFNNDVYKV-SGGLHGVGLSVVNALSKNLEVIVKQNG 139 >gi|254374930|ref|ZP_04990411.1| hypothetical protein FTDG_01110 [Francisella novicida GA99-3548] gi|151572649|gb|EDN38303.1| hypothetical protein FTDG_01110 [Francisella novicida GA99-3548] Length = 627 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E P+ I+E+I+NS+D A +S++ + + ++ D+G GM + Sbjct: 29 ENPNHLIQEIIDNSVDEVLAGFASKINITLYED--NSIEVADDGRGMPVD 76 >gi|118498118|ref|YP_899168.1| DNA topoisomerase IV subunit B [Francisella tularensis subsp. novicida U112] gi|194323345|ref|ZP_03057129.1| DNA topoisomerase IV, B subunit [Francisella tularensis subsp. novicida FTE] gi|208779469|ref|ZP_03246814.1| DNA topoisomerase IV, B subunit [Francisella novicida FTG] gi|118424024|gb|ABK90414.1| topoisomerase IV, subunit B [Francisella novicida U112] gi|194322709|gb|EDX20189.1| DNA topoisomerase IV, B subunit [Francisella tularensis subsp. novicida FTE] gi|208744430|gb|EDZ90729.1| DNA topoisomerase IV, B subunit [Francisella novicida FTG] Length = 627 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E P+ I+E+I+NS+D A +S++ + + ++ D+G GM + Sbjct: 29 ENPNHLIQEIIDNSVDEVLAGFASKINITLYED--NSIEVADDGRGMPVD 76 >gi|150390046|ref|YP_001320095.1| histidine kinase [Alkaliphilus metalliredigens QYMF] gi|149949908|gb|ABR48436.1| histidine kinase [Alkaliphilus metalliredigens QYMF] Length = 181 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 10/61 (16%) Query: 28 KEL-------IENSLDAESSRVETVIAG---GGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 KEL +NS+ A++ ++E I + +I+D+G GM ++ AV CT Sbjct: 2 KELSLHILDIAQNSIAAKAKKIEIHIWEDLENNQLRIKISDDGNGMDAKLAKRAVDPFCT 61 Query: 78 S 78 S Sbjct: 62 S 62 >gi|332366316|gb|EGJ44068.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK1059] Length = 649 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + DNG G+ + Sbjct: 50 EIVDNSIDEALAGFASHIQVFIEKD--NSITVVDNGRGIPVD 89 >gi|332362817|gb|EGJ40611.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK355] Length = 649 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + DNG G+ + Sbjct: 50 EIVDNSIDEALAGFASHIQVFIEKD--NSITVVDNGRGIPVD 89 >gi|332361540|gb|EGJ39344.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK1056] Length = 649 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + DNG G+ + Sbjct: 50 EIVDNSIDEALAGFASHIQVFIEKD--NSITVVDNGRGIPVD 89 >gi|328945965|gb|EGG40112.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK1087] Length = 649 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + DNG G+ + Sbjct: 50 EIVDNSIDEALAGFASHIQVFIEKD--NSITVVDNGRGIPVD 89 >gi|327489313|gb|EGF21106.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK1058] Length = 649 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + DNG G+ + Sbjct: 50 EIVDNSIDEALAGFASHIQVFIEKD--NSITVVDNGRGIPVD 89 >gi|327469614|gb|EGF15083.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK330] Length = 649 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + DNG G+ + Sbjct: 50 EIVDNSIDEALAGFASHIQVFIEKD--NSITVVDNGRGIPVD 89 >gi|327459890|gb|EGF06230.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK1057] Length = 649 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + DNG G+ + Sbjct: 50 EIVDNSIDEALAGFASHIQVFIEKD--NSITVVDNGRGIPVD 89 >gi|325696789|gb|EGD38677.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK160] Length = 649 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + DNG G+ + Sbjct: 50 EIVDNSIDEALAGFASHIQVFIEKD--NSITVVDNGRGIPVD 89 >gi|325687830|gb|EGD29850.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK72] Length = 649 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + DNG G+ + Sbjct: 50 EIVDNSIDEALAGFASHIQVFIEKD--NSITVVDNGRGIPVD 89 >gi|260588962|ref|ZP_05854875.1| sensor histidine kinase [Blautia hansenii DSM 20583] gi|331083316|ref|ZP_08332429.1| hypothetical protein HMPREF0992_01353 [Lachnospiraceae bacterium 6_1_63FAA] gi|260540741|gb|EEX21310.1| sensor histidine kinase [Blautia hansenii DSM 20583] gi|330404397|gb|EGG83942.1| hypothetical protein HMPREF0992_01353 [Lachnospiraceae bacterium 6_1_63FAA] Length = 498 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 23/139 (16%) Query: 14 IAAGEIIERPSIAIKELIENSL----DAESSRVETVIAGGGKSFFQIT--DNGFGMTSEE 67 IA E I+R + ++ NSL D + R+ + G F Q+ DNG G+ +++ Sbjct: 377 IADAEQIKR---VVNNIVSNSLKYTGDGKQKRINLRVKDVG-DFIQVEIEDNGKGIAAKD 432 Query: 68 IPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEK 127 +P R D S + G G IG L+++ + +++ G A S E Sbjct: 433 LPNIFDRFY----RTDASRNSSKGGSG-----IG----LSIVKKIMEDHGGKVWATSKEN 479 Query: 128 ISSVRPVAMNPGTIVEVRD 146 I +V + V V + Sbjct: 480 IGTVMYFVLRKYQEVPVNE 498 >gi|218671231|ref|ZP_03520902.1| integral membrane sensor signal transduction histidine kinase [Rhizobium etli GR56] Length = 98 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 26 AIKELIENSLDAESSR--VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 A+ L+ N++D +R + ++ G +TD G G+ +E + + Sbjct: 3 AVSNLVRNAIDHGGNRGMITVSVSDIGGGRISVTDEGPGIPAEHRELVFEPFY 55 >gi|187931098|ref|YP_001891082.1| DNA topoisomerase IV subunit B [Francisella tularensis subsp. mediasiatica FSC147] gi|187712007|gb|ACD30304.1| DNA topoisomerase IV, B subunit [Francisella tularensis subsp. mediasiatica FSC147] Length = 627 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E P+ I+E+I+NS+D A +S++ + + ++ D+G GM + Sbjct: 29 ENPNHLIQEIIDNSVDEVLAGFASKINITLYED--NSIEVADDGRGMPVD 76 >gi|134301370|ref|YP_001121338.1| DNA topoisomerase IV subunit B [Francisella tularensis subsp. tularensis WY96-3418] gi|134049147|gb|ABO46218.1| DNA topoisomerase IV, B subunit [Francisella tularensis subsp. tularensis WY96-3418] Length = 627 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E P+ I+E+I+NS+D A +S++ + + ++ D+G GM + Sbjct: 29 ENPNHLIQEIIDNSVDEVLAGFASKINITLYED--NSIEVADDGRGMPVD 76 >gi|125717721|ref|YP_001034854.1| DNA gyrase subunit B [Streptococcus sanguinis SK36] gi|323351846|ref|ZP_08087497.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis VMC66] gi|125497638|gb|ABN44304.1| DNA gyrase, putative [Streptococcus sanguinis SK36] gi|322121903|gb|EFX93635.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis VMC66] gi|324990928|gb|EGC22863.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK353] gi|324993188|gb|EGC25108.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK405] gi|324995509|gb|EGC27421.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK678] gi|325689965|gb|EGD31969.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK115] gi|325694221|gb|EGD36137.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK150] gi|327461458|gb|EGF07789.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK1] gi|327473763|gb|EGF19181.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK408] gi|332359588|gb|EGJ37406.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis SK49] Length = 649 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + DNG G+ + Sbjct: 50 EIVDNSIDEALAGFASHIQVFIEKD--NSITVVDNGRGIPVD 89 >gi|332186515|ref|ZP_08388259.1| HAMP domain protein [Sphingomonas sp. S17] gi|332013498|gb|EGI55559.1| HAMP domain protein [Sphingomonas sp. S17] Length = 458 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 10/81 (12%) Query: 30 LIENSLDAES--SRVETVIA--GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFS 85 LI N++ + R++ + G + ++ D+G G++ E+ +A++R Sbjct: 360 LIGNAIKHGAPGGRIQVTLEAADGDRLALRVADDGPGISPEDRALALRRFG------RLD 413 Query: 86 NIHTFGFRGEALPSIGAVSHL 106 + T G LP + A++ L Sbjct: 414 SARTRAGHGLGLPLVAAIARL 434 >gi|302344083|ref|YP_003808612.1| integral membrane sensor signal transduction histidine kinase [Desulfarculus baarsii DSM 2075] gi|301640696|gb|ADK86018.1| integral membrane sensor signal transduction histidine kinase [Desulfarculus baarsii DSM 2075] Length = 354 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 25/61 (40%), Gaps = 3/61 (4%) Query: 22 RPSIAIKELIENSLDA---ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 R + L++N++ A + + + G + D G G+ +E++ T+ Sbjct: 243 RLRQVLLNLMQNAIQASPRGARVIVSTAREGDFGLITVGDQGCGIAAEDLARIFNPFFTT 302 Query: 79 K 79 K Sbjct: 303 K 303 >gi|284010223|dbj|BAI66711.1| DNA gyrase B [Borrelia sp. BF16] Length = 625 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + ELI+NS+D A ++E VI S ++DNG G+ ++ Sbjct: 28 VYELIDNSIDEALAGFCDKIEVVINSD--SSITVSDNGRGIPTD 69 >gi|167771655|ref|ZP_02443708.1| hypothetical protein ANACOL_03027 [Anaerotruncus colihominis DSM 17241] gi|167666295|gb|EDS10425.1| hypothetical protein ANACOL_03027 [Anaerotruncus colihominis DSM 17241] Length = 636 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 66/182 (36%), Gaps = 41/182 (22%) Query: 27 IKELIENSLDA--------------ESSR----VETVIAGGGKSFFQITDNGFGMTSEEI 68 ++ELI N+ DA SR + I ++ + DNG GM+ +E+ Sbjct: 29 LRELISNASDAIDKLYYHSLNENITGLSRDDFAINLSIDRENRTL-TVIDNGIGMSRDEL 87 Query: 69 P-----------MAVQRHCTSKISDDFSNIHTF--GFRGEALPSIGAVSH-LTLMSRPPQ 114 +A ++ T + DD I F GF S VS +T+ SR Sbjct: 88 ESNLGTIAKSGSLAFKQEETGEHKDDIDIIGQFGVGF-----YSAFMVSSCVTVYSRQHG 142 Query: 115 NNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRR 174 + + G + ++ P M+ V + E ++ + I ++RR Sbjct: 143 ADEAWKWESRGIEGYTIEPCDMSERGTKIVLRIKDN---EGEDNYDEFLDAHRIAALVRR 199 Query: 175 MA 176 + Sbjct: 200 YS 201 >gi|166367564|ref|YP_001659837.1| DNA gyrase subunit B [Microcystis aeruginosa NIES-843] gi|166089937|dbj|BAG04645.1| DNA gyrase subunit B [Microcystis aeruginosa NIES-843] Length = 640 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 39 VYEVVDNSIDEALAGYCTHIEVDIKADG--SVSVTDDGRGIPTD 80 >gi|159028965|emb|CAO87426.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 640 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 39 VYEVVDNSIDEALAGYCTHIEVDIKADG--SVSVTDDGRGIPTD 80 >gi|19909729|dbj|BAB87060.1| DNA gyrase subunit B [Microcystis wesenbergii NIES-104] Length = 381 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 4 VYEVVDNSIDEALAGYCTHIEVDIKADG--SVSVTDDGRGIPTD 45 >gi|19909727|dbj|BAB87059.1| DNA gyrase subunit B [Microcystis viridis NIES-102] Length = 381 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 4 VYEVVDNSIDEALAGYCTHIEVDIKADG--SVSVTDDGRGIPTD 45 >gi|23978259|dbj|BAC21119.1| DNA gyrase B subunit [Xenococcus sp. PCC 7307] Length = 395 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + +E I G +TD+G G+ Sbjct: 10 VYEVVDNSIDEALAGFCTHIEVDINADG--SITVTDDGRGIP 49 >gi|23978227|dbj|BAC21110.1| DNA gyrase B subunit [Microcystis wesenbergii] Length = 391 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 10 VYEVVDNSIDEALAGYCTHIEVDIKADG--SVSVTDDGRGIPTD 51 >gi|85702981|ref|ZP_01034085.1| C4-dicarboxylate transport sensor protein DctB, putative [Roseovarius sp. 217] gi|85671909|gb|EAQ26766.1| C4-dicarboxylate transport sensor protein DctB, putative [Roseovarius sp. 217] Length = 574 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 10/64 (15%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R I L+ N++DA + +E ++A G + + DNG G+ + + Sbjct: 464 RVEQVIVNLLRNAIDA--TNTVPDAVIEILLAAGETAVLTVRDNGEGIG--DFKNLFEPF 519 Query: 76 CTSK 79 T+K Sbjct: 520 YTTK 523 >gi|229084578|ref|ZP_04216848.1| hypothetical protein bcere0022_12120 [Bacillus cereus Rock3-44] gi|228698728|gb|EEL51443.1| hypothetical protein bcere0022_12120 [Bacillus cereus Rock3-44] Length = 450 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 11/69 (15%) Query: 18 EIIERPS------IAIKELIENSL---DAESS-RVETVIAGGGKSFFQITDNGFGMTSEE 67 +++E P + LI+N++ DA ++ G F++ D+G G+ E+ Sbjct: 330 QVVEHPFDPDRMEQVLTNLIDNAIRHTDAGGHVKLVIDTKNNGL-IFEVQDSGAGIPEED 388 Query: 68 IPMAVQRHC 76 IP R Sbjct: 389 IPFLFDRFY 397 >gi|290243045|ref|YP_003494715.1| hypothetical protein TK90_2763 [Thioalkalivibrio sp. K90mix] gi|288945550|gb|ADC73248.1| conserved hypothetical protein [Thioalkalivibrio sp. K90mix] Length = 563 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 20/68 (29%) Query: 28 KELIE---NSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDF 84 K L+E NS+DA ++ + + G F++ DNG G+ I D Sbjct: 26 KALLEFVMNSVDAHATEMTIEMDRHG---FRVEDNGKGIQR--------------IHDVE 68 Query: 85 SNIHTFGF 92 + + T GF Sbjct: 69 TCLGTLGF 76 >gi|332678845|gb|AEE87974.1| Topoisomerase IV subunit B [Francisella cf. novicida Fx1] Length = 627 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E P+ I+E+I+NS+D A +S++ + + ++ D+G GM + Sbjct: 29 ENPNHLIQEIIDNSVDEVLAGFASKINITLYED--NSIEVADDGRGMPVD 76 >gi|293497972|ref|ZP_06665826.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 58-424] gi|291096903|gb|EFE27161.1| DNA gyrase, B subunit [Staphylococcus aureus subsp. aureus 58-424] Length = 644 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++++E VI ++ ++TDNG G+ Sbjct: 50 EIVDNSIDEALAGYANQIEVVIEKD--NWIKVTDNGRGIP 87 >gi|251780881|ref|ZP_04823801.1| anti-sigma F factor [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085196|gb|EES51086.1| anti-sigma F factor [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 143 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 22/98 (22%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSL--------DAESSRVETVIAGGGKSFF 54 I +L I++I+ A+ E + NS+ D R+E I G + Sbjct: 28 IAQLDP-TIDEIS------DVKTAVSEAVTNSIIHGYENKED-GIIRIEVEICDGEVT-I 78 Query: 55 QITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGF 92 +ITDNG G+ E+IP ++ TS D GF Sbjct: 79 EITDNGKGI--EDIPKVMEPLYTS--RPDLER-SGMGF 111 >gi|229524916|ref|ZP_04414321.1| DNA gyrase subunit B [Vibrio cholerae bv. albensis VL426] gi|229338497|gb|EEO03514.1| DNA gyrase subunit B [Vibrio cholerae bv. albensis VL426] Length = 805 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + I + ++D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGYCKDIVITIHED--NSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L++ Q G + + V Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKVLLTIYRGGKIHTQTYHHGVPQAPLAVVG 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T VR P+ F + + +++ +R ++ VS + + K Sbjct: 159 DTERTGTTVRF----WPSAQTFT-NIEFHYDILAKRLRELSFLNSGVSIKLTDEREEDKK 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 +F G ++ + + + +N G Y F N Sbjct: 214 DHFMYEGG-IQAFVTHLNRNKTPIHEKVFHFNQEREDGISVEVAMQWNDGFQENIYCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|52081647|ref|YP_080438.1| sensory histidine kinase DcuS [Bacillus licheniformis ATCC 14580] gi|52787030|ref|YP_092859.1| sensory histidine kinase DcuS [Bacillus licheniformis ATCC 14580] gi|319647563|ref|ZP_08001783.1| YufL protein [Bacillus sp. BT1B_CT2] gi|52004858|gb|AAU24800.1| putative Histidine kinase [Bacillus licheniformis ATCC 14580] gi|52349532|gb|AAU42166.1| YufL [Bacillus licheniformis ATCC 14580] gi|317390411|gb|EFV71218.1| YufL protein [Bacillus sp. BT1B_CT2] Length = 533 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 7/67 (10%) Query: 19 IIERPSIAIKELIENSLDA-ESS---RVETVIA--GGGKSFFQITDNGFGMTSEEIPMAV 72 +I I L+ N+LDA ++ + G ++TD G G++ EE Sbjct: 420 VIHDLITVIGNLLNNALDAVSATEKKNISISFRHHDGQLD-IEVTDTGVGISKEEQQKMF 478 Query: 73 QRHCTSK 79 + ++K Sbjct: 479 DQGFSTK 485 >gi|45644630|gb|AAS73018.1| predicted topoisomerase IV subunit B [uncultured marine gamma proteobacterium EBAC20E09] Length = 605 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 15/74 (20%) Query: 23 PSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE---EIPM----- 70 P+ I+E+++N++D A S ++ + G +++D+G GM + + + Sbjct: 8 PNHLIQEVLDNAVDEAIAGHCSNIKIKLHKNGV--IEVSDDGRGMPVDIHPDHKLSGVEL 65 Query: 71 -AVQRHCTSKISDD 83 + H +K S D Sbjct: 66 ILCKLHAGAKFSGD 79 >gi|299538376|ref|ZP_07051659.1| sensor protein [Lysinibacillus fusiformis ZC1] gi|298725963|gb|EFI66555.1| sensor protein [Lysinibacillus fusiformis ZC1] Length = 591 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 9/84 (10%) Query: 21 ERPSIAIKELIENSL---DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 +R + L++N+L D S V+ + + D G G+ E++P +R Sbjct: 484 DRIEQVLTNLVDNALRHTDEGSVSVKVE-QEPTFAKISVQDTGHGIPQEDLPYVFERFY- 541 Query: 78 SKISDDFSNIHTFGFRGEALPSIG 101 D + + G G L I Sbjct: 542 ---KADKARTRSKGGTGLGLA-IA 561 >gi|298372413|ref|ZP_06982403.1| DNA gyrase subunit B [Bacteroidetes oral taxon 274 str. F0058] gi|298275317|gb|EFI16868.1| DNA gyrase subunit B [Bacteroidetes oral taxon 274 str. F0058] Length = 623 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 53/336 (15%), Positives = 113/336 (33%), Gaps = 28/336 (8%) Query: 27 IKELIENSLDA-----ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS-KI 80 IKE+I+NS+D ++ ++ + ++ D G G++ E + AV TS K Sbjct: 53 IKEVIDNSIDEFRNGFGAT-IDITLEDN---TVRVRDYGRGISQESMIKAVSVMNTSGKY 108 Query: 81 SDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPG 139 + + G G ++ A+S + S G + EK V Sbjct: 109 TSSGYK-KSVGLNGVGTKAVNALSERFIIRSYRE----GTVKSAVFEKGVLVEETPAEAT 163 Query: 140 TIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF----TFSTIKSNRYK 195 ++ F + + + +I+ ++ + T ++ Sbjct: 164 AEKSGTEVIFKPDNDADIFGNFAYREEFVVSMIKNYCYLNMGLTIDFNGSKMTSQNGLLD 223 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNE--KSNEITLQGYTGIPTFNRGNANQFYVF 253 + ++ + I + GED N+ + + G I +A + Y Sbjct: 224 LLDENITSDPLYPIVHLKGEDIEIVFTHTNQYGEEYYSFVNGQHTIQGGTHQSAFREYFG 283 Query: 254 INGR-TVQDKFILSTIRTAYAETIPLG-RYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNP 311 + R + IR I + + PV +I V+ + S Sbjct: 284 KSIRDFYGKNMEYADIRMGLVAAISVSLQDPVFESQTKIKLGSTKVDPNDPNSMTV---Q 340 Query: 312 TIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 I +F+++ I + ++ + +L KK+ S + Sbjct: 341 KFIGDFVVKEIDRYLH-INHDVAEILQKKIQESEKE 375 >gi|255994573|ref|ZP_05427708.1| DNA gyrase, B subunit [Eubacterium saphenum ATCC 49989] gi|255993286|gb|EEU03375.1| DNA gyrase, B subunit [Eubacterium saphenum ATCC 49989] Length = 651 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + ++ I G ++ DNG GM + Sbjct: 54 VYEIVDNSIDEALAGHCNEIKICINEDG--SIRVEDNGRGMPVD 95 >gi|254284215|ref|ZP_04959183.1| DNA topoisomerase IV, B subunit [gamma proteobacterium NOR51-B] gi|219680418|gb|EED36767.1| DNA topoisomerase IV, B subunit [gamma proteobacterium NOR51-B] Length = 629 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 15/75 (20%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-- 74 RP+ +E+I+NS+D A + +++ + G + DNG GM ++ P Sbjct: 29 TRPNHLAQEVIDNSVDEALAGHADQIDVTLHADG--SITVVDNGRGMPVDQHPELGLPGV 86 Query: 75 -------HCTSKISD 82 H K SD Sbjct: 87 EVILSTLHAGGKFSD 101 >gi|326518120|dbj|BAK07312.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 722 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 29/247 (11%), Positives = 83/247 (33%), Gaps = 22/247 (8%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE---EIPMAVQR----- 74 + E+++N++D A ++ + V+ + +TDNG G+ ++ + + Sbjct: 116 VYEILDNAVDEAQAGYATEINVVLHDD--NSVSVTDNGRGIPTDIHPQTKKSCVETVLTL 173 Query: 75 -HCTSKISDDFSNIHTF----GFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS 129 H K + ++ G G L + A+S ++ Q G+ ++ Sbjct: 174 MHAGGKFG---GSTSSYSVAGGLHGVGLSVVNALSEALEVTVCRDGKEYRQHYSRGKPLT 230 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 + + + P + F + + + + I+ IR +A P+++ T + Sbjct: 231 MLSSTTLPDESSSRQGSCIRFWPDKEIFTTTIEFDFSTISSRIRELAFLNPELTITLTKE 290 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ 249 + + + + + D + + + + + ++ Sbjct: 291 EQDAQVQHNEYCYAGGLVEYVAWLNTDKKPLHDPIAFRKELDGIIVDVSLQWCSDSYSDT 350 Query: 250 FYVFING 256 + N Sbjct: 351 VLGYANS 357 >gi|319940658|ref|ZP_08015001.1| hypothetical protein HMPREF9464_00220 [Sutterella wadsworthensis 3_1_45B] gi|319806024|gb|EFW02782.1| hypothetical protein HMPREF9464_00220 [Sutterella wadsworthensis 3_1_45B] Length = 814 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Query: 22 RPSIAIKELIENSLDAESS---RVETVIAGGGKSFFQ-ITDNGFGMTSEEIPMAVQRHCT 77 R ++ L++N+L + ++ + + DNG G+ +E++ +R Sbjct: 702 RLRQVLRNLLDNALKYNNKTRPKISVSVKTMNADIIVDVQDNGMGIAAEDLEKIFERFYR 761 Query: 78 S 78 S Sbjct: 762 S 762 >gi|296270106|ref|YP_003652738.1| signal transduction histidine kinase LytS [Thermobispora bispora DSM 43833] gi|296092893|gb|ADG88845.1| signal transduction histidine kinase, LytS [Thermobispora bispora DSM 43833] Length = 394 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 9/53 (16%) Query: 30 LIENSL------DAESSRVETVIAGGGKS-FFQITDNGFGMTSEEIP--MAVQ 73 L+EN+L A R+ + G + D+G GM E++ +A + Sbjct: 287 LVENALRHGLEPKAGVGRITIIAEDAGSECRITVEDDGVGMDPEQLRRILAGE 339 >gi|206578624|ref|YP_002236552.1| DNA topoisomerase IV, B subunit [Klebsiella pneumoniae 342] gi|288933535|ref|YP_003437594.1| DNA topoisomerase IV subunit beta [Klebsiella variicola At-22] gi|290511406|ref|ZP_06550775.1| DNA topoisomerase IV, B subunit [Klebsiella sp. 1_1_55] gi|206567682|gb|ACI09458.1| DNA topoisomerase IV, B subunit [Klebsiella pneumoniae 342] gi|288888264|gb|ADC56582.1| DNA topoisomerase IV, B subunit [Klebsiella variicola At-22] gi|289776399|gb|EFD84398.1| DNA topoisomerase IV, B subunit [Klebsiella sp. 1_1_55] Length = 631 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 71/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + RVE ++ ++ D+G GM EE + Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHAKRVEVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 89 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDGQVYSIAFENGEK 147 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--F 184 + +F S + + +T +++ A+ P V F Sbjct: 148 VEDLHVTGTCGKRNTGTSVHFW----PDESFFDSPRFSVSRLTHLLKAKAVLCPGVEIVF 203 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 S + N E ++ + Sbjct: 204 RDQVNDSEQRWCYADGLNDYLCEAVNGL 231 >gi|149194734|ref|ZP_01871829.1| DNA gyrase subunit B [Caminibacter mediatlanticus TB-2] gi|149135157|gb|EDM23638.1| DNA gyrase subunit B [Caminibacter mediatlanticus TB-2] Length = 758 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 81/213 (38%), Gaps = 23/213 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGM-----TSEEIPMA----VQRH 75 E+++N++D A ++ ++ I G I+DNG G+ E+IP A H Sbjct: 40 EVVDNAIDEAMAGYATEIKVKINKDG--SVTISDNGRGIPVDIHPEEKIPAATVVLTVLH 97 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K + + + G G + + A+S +M+ Q G+ I+ + + Sbjct: 98 AGGKFDNKTYKV-SGGLHGVGVSVVNALSKKLIMTIKRDGKIYKQEFERGKPITDLEVIG 156 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T + + S + + ++ ++ +A P ++ F + N + Sbjct: 157 NTNRTGTTI-QFW----PDEEIFDSVEFKPQILQKRLKELAYLNPNITIYFEDERHNIKE 211 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKS 228 + G + + + ++ I + + N++ Sbjct: 212 VYHF--EGGIKDFVKTLTNKELITDVIYYNKQY 242 >gi|221068071|ref|ZP_03544176.1| histidine kinase [Comamonas testosteroni KF-1] gi|220713094|gb|EED68462.1| histidine kinase [Comamonas testosteroni KF-1] Length = 497 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 7/57 (12%) Query: 30 LIENSLDA--ESS----RVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N+LDA ++ + + GG++ + DNG GMT+ + T+K Sbjct: 395 LVRNALDALGQAQDAQAAISITLEQSGGEALLMVQDNGPGMTAATAERIFEPFFTTK 451 >gi|56962441|ref|YP_174167.1| two-component sensor histidine kinase [Bacillus clausii KSM-K16] gi|56908679|dbj|BAD63206.1| two-component sensor histidine kinase [Bacillus clausii KSM-K16] Length = 530 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 11/73 (15%) Query: 14 IAAGEIIERPSIAIKELIENSLDA-----ESS-RVETVIAGGGKSFFQ-ITDNGFGMTSE 66 I + ++ I LI+N+L+A ++ V G I DNG GMT + Sbjct: 417 IKSDHVVT----VIGNLIDNALEAAVAHQGANAHVHIAFTDFGNDMIMDIEDNGKGMTPK 472 Query: 67 EIPMAVQRHCTSK 79 E ++ TSK Sbjct: 473 EEAHYLETGATSK 485 >gi|291540889|emb|CBL14000.1| Signal transduction histidine kinase [Roseburia intestinalis XB6B4] Length = 345 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 3/61 (4%) Query: 31 IENSLD--AESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNI 87 ++N+LD + + + DNG G+ E++ +R S+ S D I Sbjct: 246 VKNALDHTEKGDTIHIKWKALPSAVQITVKDNGCGIHPEDLHHIFKRFYRSRFSKDTQGI 305 Query: 88 H 88 Sbjct: 306 G 306 >gi|239833136|ref|ZP_04681465.1| Sensor protein chvG [Ochrobactrum intermedium LMG 3301] gi|239825403|gb|EEQ96971.1| Sensor protein chvG [Ochrobactrum intermedium LMG 3301] Length = 605 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ ++G G + DNG G+ E I +R Sbjct: 489 RLGQVVSNLIENARSFVPDDTG--RIVVTLSGEGSRLRVLVEDNGPGIPIENIERIFERF 546 Query: 76 CT 77 T Sbjct: 547 YT 548 >gi|153217164|ref|ZP_01950928.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae 1587] gi|124113807|gb|EAY32627.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae 1587] Length = 684 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAESSRVE----TVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA S +E + +++DNG G+ E + + Sbjct: 577 QRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEERQVIVRVSDNGCGIAPELLTTMFEPF 636 Query: 76 CTSK 79 TSK Sbjct: 637 QTSK 640 >gi|116620818|ref|YP_822974.1| zinc finger, RanBP2-type [Candidatus Solibacter usitatus Ellin6076] gi|116223980|gb|ABJ82689.1| zinc finger, RanBP2-type [Candidatus Solibacter usitatus Ellin6076] Length = 825 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 16/87 (18%) Query: 22 RPSIAIKELIENSLDAESS-----------RVETVIAGG-----GKSFFQITDNGFGMTS 65 RP A+ ELI+NS+D+ +S V + G+ + DNG G+T Sbjct: 2 RPLDALCELIDNSIDSFASDGFQQKGSENNTVTVYLPKAAEVSRGRGSIAVLDNGPGLTL 61 Query: 66 EEIPMAVQRHCTSKISDDFSNIHTFGF 92 EE A++ +S D + GF Sbjct: 62 EEAQNALRAGFSSNNPFDRLGLFGMGF 88 >gi|7106359|ref|NP_034946.1| MORC family CW-type zinc finger protein 1 [Mus musculus] gi|81882085|sp|Q9WVL5|MORC1_MOUSE RecName: Full=MORC family CW-type zinc finger protein 1; AltName: Full=Protein microrchidia gi|5410255|gb|AAD43003.1|AF084945_1 microrchidia [Mus musculus] gi|21410299|gb|AAH30893.1| Microrchidia 1 [Mus musculus] gi|148665678|gb|EDK98094.1| microrchidia 1 [Mus musculus] Length = 950 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 12/71 (16%) Query: 29 ELIENSLDAESSRVET-----VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA + R++ GG + D+G GM+ +E + TSK Sbjct: 33 ELLDNARDAGAVRLDVFSVDNETLQGGFMLCFL-DDGCGMSPDEASDVIY-FGTSK---- 86 Query: 84 FSNIHTFGFRG 94 + T F G Sbjct: 87 -KRLSTLKFIG 96 >gi|119855087|ref|YP_935692.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium sp. KMS] gi|145225907|ref|YP_001136561.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium gilvum PYR-GCK] gi|119697805|gb|ABL94877.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium sp. KMS] gi|145218370|gb|ABP47773.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium gilvum PYR-GCK] Length = 381 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 24/91 (26%) Query: 22 RPSIAIKELIENSL-----------DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 R + I L++N+L DA + G+ + DNG G+ +E +P Sbjct: 267 RLAQVIGNLLDNALRHTPARGRVEVDAAAK--------PGEVIITVRDNGDGIAAEHLPH 318 Query: 71 AVQRHCTSKISDDFSNIHTFGFRGEALPSIG 101 +R D + + G G L I Sbjct: 319 VFERFY----RADVARDRSHGGAGIGLA-IA 344 >gi|332861411|ref|XP_003317669.1| PREDICTED: MORC family CW-type zinc finger protein 4, partial [Pan troglodytes] Length = 572 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + KS TD+G GMT ++ + T Sbjct: 14 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 73 Query: 78 SK 79 K Sbjct: 74 DK 75 >gi|301774430|ref|XP_002922637.1| PREDICTED: MORC family CW-type zinc finger protein 4-like isoform 2 [Ailuropoda melanoleuca] Length = 866 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + KS TD+G GMT ++ + T Sbjct: 14 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 73 Query: 78 SK 79 K Sbjct: 74 DK 75 >gi|301774428|ref|XP_002922636.1| PREDICTED: MORC family CW-type zinc finger protein 4-like isoform 1 [Ailuropoda melanoleuca] Length = 903 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + KS TD+G GMT ++ + T Sbjct: 14 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 73 Query: 78 SK 79 K Sbjct: 74 DK 75 >gi|301170268|emb|CBW29873.1| DNA topoisomerase IV, subunit B [Haemophilus influenzae 10810] Length = 632 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++TDNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFATKIEVILHTD--QSIEVTDNGRGMPVD 77 >gi|297304517|ref|XP_002806391.1| PREDICTED: MORC family CW-type zinc finger protein 4 isoform 2 [Macaca mulatta] Length = 900 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + KS TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|296236129|ref|XP_002807953.1| PREDICTED: LOW QUALITY PROTEIN: MORC family CW-type zinc finger protein 4-like [Callithrix jacchus] Length = 906 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + KS TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|291407736|ref|XP_002720214.1| PREDICTED: zinc finger, CW type with coiled-coil domain 2 isoform 2 [Oryctolagus cuniculus] Length = 899 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + KS TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|291407734|ref|XP_002720213.1| PREDICTED: zinc finger, CW type with coiled-coil domain 2 isoform 1 [Oryctolagus cuniculus] Length = 936 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + KS TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|167461556|ref|ZP_02326645.1| DNA gyrase subunit B [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381377|ref|ZP_08055380.1| DNA gyrase subunit B-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154953|gb|EFX47224.1| DNA gyrase subunit B-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 636 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 6/47 (12%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 E+++NS+D A ++++ I + + DNG G+ E P Sbjct: 44 EVVDNSIDEALAGFCTKIDVTIHED--NSITVIDNGRGIPVGEHPKL 88 >gi|145553971|ref|NP_001078823.1| MORC family CW-type zinc finger protein 4 isoform b [Homo sapiens] Length = 900 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + KS TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|119633228|gb|ABL84747.1| MORC family CW-type zinc finger protein 4 [Homo sapiens] Length = 900 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + KS TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|119623133|gb|EAX02728.1| MORC family CW-type zinc finger 4, isoform CRA_d [Homo sapiens] Length = 935 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + KS TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|109131795|ref|XP_001093744.1| PREDICTED: MORC family CW-type zinc finger protein 4 isoform 1 [Macaca mulatta] Length = 937 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + KS TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|145553976|ref|NP_078933.3| MORC family CW-type zinc finger protein 4 isoform a [Homo sapiens] gi|73920232|sp|Q8TE76|MORC4_HUMAN RecName: Full=MORC family CW-type zinc finger protein 4; AltName: Full=Zinc finger CW-type coiled-coil domain protein 2 gi|57284113|emb|CAI43049.1| MORC family CW-type zinc finger 4 [Homo sapiens] gi|225000030|gb|AAI72254.1| MORC family CW-type zinc finger 4 [synthetic construct] gi|225000926|gb|AAI72575.1| MORC family CW-type zinc finger 4 [synthetic construct] Length = 937 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + KS TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|330444523|ref|YP_004377509.1| DNA gyrase subunit B [Chlamydophila pecorum E58] gi|328807633|gb|AEB41806.1| DNA gyrase, B subunit [Chlamydophila pecorum E58] Length = 801 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 10/56 (17%) Query: 16 AGEIIERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 AG I + E+I+NS+D A + + I GG I+DNG G+ E Sbjct: 33 AG--ISGLHHLVYEVIDNSIDEALAGYCTEINVRILEDGG---ITISDNGRGIPVE 83 >gi|312903697|ref|ZP_07762871.1| hypothetical protein HMPREF9512_01454 [Enterococcus faecalis TX0635] gi|310632889|gb|EFQ16172.1| hypothetical protein HMPREF9512_01454 [Enterococcus faecalis TX0635] Length = 547 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 7/47 (14%) Query: 29 ELIENSLDAESSRVETVIAG-------GGKSFFQITDNGFGMTSEEI 68 EL++NS DA+++ ++ S I DNG GMT EI Sbjct: 27 ELVKNSYDADATDIKIFFKNFEDNFELNDGSEIYIVDNGDGMTKNEI 73 >gi|291558319|emb|CBL35436.1| DNA gyrase subunit B [Eubacterium siraeum V10Sc8a] Length = 686 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++N++D A + + I G ++TDNG G+ Sbjct: 71 VYEIVDNAIDEALAGYCTEINVKILPG--DVIEVTDNGRGIP 110 >gi|291531944|emb|CBK97529.1| DNA gyrase subunit B [Eubacterium siraeum 70/3] Length = 692 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++N++D A + + I G ++TDNG G+ Sbjct: 77 VYEIVDNAIDEALAGYCTEINVKILPG--DVIEVTDNGRGIP 116 >gi|282859419|ref|ZP_06268525.1| DNA gyrase, B subunit [Prevotella bivia JCVIHMP010] gi|282587817|gb|EFB93016.1| DNA gyrase, B subunit [Prevotella bivia JCVIHMP010] Length = 656 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 E ++NS+D A + +E I + + DNG G+ +E Sbjct: 47 ETVDNSIDEAMAGYCTDIEVTINED--NSITVEDNGRGIPVDEHEKL 91 >gi|257090548|ref|ZP_05584909.1| predicted protein [Enterococcus faecalis CH188] gi|256999360|gb|EEU85880.1| predicted protein [Enterococcus faecalis CH188] Length = 728 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 7/47 (14%) Query: 29 ELIENSLDAESSRVETVIAG-------GGKSFFQITDNGFGMTSEEI 68 EL++NS DA+++ ++ S I DNG GMT EI Sbjct: 31 ELVKNSYDADATDIKIFFKNFEDNFELNDGSEIYIVDNGDGMTKNEI 77 >gi|229514642|ref|ZP_04404103.1| hypothetical protein VCB_002294 [Vibrio cholerae TMA 21] gi|229348622|gb|EEO13580.1| hypothetical protein VCB_002294 [Vibrio cholerae TMA 21] Length = 675 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAESSRVE----TV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA S +E ++ + +++DNG G+ E + + Sbjct: 568 QRLRQVLGNLVSNALDAMSETLEPKLSISAVSEEDQVIVRVSDNGCGIPPELLTTMFEPF 627 Query: 76 CTSK 79 TSK Sbjct: 628 QTSK 631 >gi|254524899|ref|ZP_05136954.1| two-component system sensor protein [Stenotrophomonas sp. SKA14] gi|219722490|gb|EED41015.1| two-component system sensor protein [Stenotrophomonas sp. SKA14] Length = 463 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 22/98 (22%) Query: 26 AIKELIENSL----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 AIK L++N+L D S ++ + GG++ I D+G G+ + +R Sbjct: 362 AIKNLVDNALKYGGD-GSLQIALTVE-GGQAVLTIADHGAGIAPADAERVFERFA----- 414 Query: 82 DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119 RGE PS GA L ++ R ++ G Sbjct: 415 -----------RGEGAPSGGAGLGLAIVKRVVDSHGGH 441 >gi|254478916|ref|ZP_05092278.1| DNA gyrase, B subunit [Carboxydibrachium pacificum DSM 12653] gi|214035138|gb|EEB75850.1| DNA gyrase, B subunit [Carboxydibrachium pacificum DSM 12653] Length = 654 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 77/245 (31%), Gaps = 28/245 (11%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 62 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 119 Query: 75 -HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVR 132 H K ++D + + G G + + A+S L ++ + K Sbjct: 120 LHAGGKFNNDAYKV-SGGLHGVGVSVVNALSERLEVIVKQRGKVFRQVYERGVPKTPLEV 178 Query: 133 PVAM-NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKS 191 GTI+ + + + +++ +R +A ++ + Sbjct: 179 IGETEETGTIITFK-------PDKEIFEEIVFDYDILAQRLRELAFLNKGINIKLIDERD 231 Query: 192 NRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFY 251 + ++ + G + + + + + ++ + +N Y Sbjct: 232 GKEEV--FNYEGGLIAFVKYLNRNKEVLHEEPIYMEAKNTDYEVEVC-MQYNDSYNENIY 288 Query: 252 VFING 256 F N Sbjct: 289 SFANN 293 >gi|222528132|ref|YP_002572014.1| PAS/PAC sensor signal transduction histidine kinase [Caldicellulosiruptor bescii DSM 6725] gi|312621185|ref|YP_004022798.1| multi-sensor signal transduction histidine kinase [Caldicellulosiruptor kronotskyensis 2002] gi|222454979|gb|ACM59241.1| PAS/PAC sensor signal transduction histidine kinase [Caldicellulosiruptor bescii DSM 6725] gi|312201652|gb|ADQ44979.1| multi-sensor signal transduction histidine kinase [Caldicellulosiruptor kronotskyensis 2002] Length = 571 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 7/61 (11%) Query: 21 ERPSIAIKELIENSL----DAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + LI N++ D R+E + G + DNG G+ E++P +R Sbjct: 456 DRLEQVLINLINNAITYVQDGG--RIEVCLKKENGNIELTVEDNGPGIPKEDLPRIFERF 513 Query: 76 C 76 Sbjct: 514 Y 514 >gi|327535675|gb|AEA94509.1| ATP-binding protein [Enterococcus faecalis OG1RF] Length = 728 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 7/47 (14%) Query: 29 ELIENSLDAESSRVETVIAG-------GGKSFFQITDNGFGMTSEEI 68 EL++NS DA+++ ++ S I DNG GMT EI Sbjct: 31 ELVKNSYDADATDIKIFFKNFEDNFELNDGSEIYIVDNGDGMTKNEI 77 >gi|167751440|ref|ZP_02423567.1| hypothetical protein EUBSIR_02436 [Eubacterium siraeum DSM 15702] gi|167655686|gb|EDR99815.1| hypothetical protein EUBSIR_02436 [Eubacterium siraeum DSM 15702] Length = 692 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++N++D A + + I G ++TDNG G+ Sbjct: 77 VYEIVDNAIDEALAGYCTEINVKILPG--DVIEVTDNGRGIP 116 >gi|167629176|ref|YP_001679675.1| DNA gyrase, b subunit [Heliobacterium modesticaldum Ice1] gi|167591916|gb|ABZ83664.1| DNA gyrase, b subunit [Heliobacterium modesticaldum Ice1] Length = 641 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +R++ +I + ++ DNG G+ + Sbjct: 49 VYEIVDNSIDEALAGYCNRIDVIIHDD--NSIEVIDNGRGIPVD 90 >gi|20806552|ref|NP_621723.1| DNA gyrase subunit B [Thermoanaerobacter tengcongensis MB4] gi|20514990|gb|AAM23327.1| DNA gyrase (topoisomerase II) B subunit [Thermoanaerobacter tengcongensis MB4] Length = 654 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 29/245 (11%), Positives = 77/245 (31%), Gaps = 28/245 (11%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 62 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 119 Query: 75 -HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVR 132 H K ++D + + G G + + A+S L ++ + K Sbjct: 120 LHAGGKFNNDAYKV-SGGLHGVGVSVVNALSERLEVIVKQRGKVFRQVYERGVPKTPLEV 178 Query: 133 PVAM-NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKS 191 GTI+ + + + +++ +R +A ++ + Sbjct: 179 IGETEETGTIITFK-------PDKEIFEEIVFDYDILAQRLRELAFLNKGINIKLIDERD 231 Query: 192 NRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFY 251 + ++ + G + + + + + ++ + +N Y Sbjct: 232 GKEEV--FNYEGGLIAFVKYLNRNKEVLHEEPIYMEAKNTDYEVEVC-MQYNDSYNENIY 288 Query: 252 VFING 256 F N Sbjct: 289 SFANN 293 >gi|332535200|ref|ZP_08411006.1| putative two-component system sensor histidine kinase, putative heat shock protein [Pseudoalteromonas haloplanktis ANT/505] gi|332035365|gb|EGI71866.1| putative two-component system sensor histidine kinase, putative heat shock protein [Pseudoalteromonas haloplanktis ANT/505] Length = 800 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 33/102 (32%), Gaps = 42/102 (41%) Query: 20 IERPSIAIKELIENSLDAESSRVETVI----------AGGGK------------------ 51 I P AI EL++NS DA++ V+ I GGK Sbjct: 19 ISGPVAAILELVKNSYDADAKEVDIKIEPGKYKKEALEHGGKITIKDDAEAKEVDIKIEP 78 Query: 52 -----------SFFQITDNGFGMTSEEIPMAVQRHCT---SK 79 I DNG GM+ +EI T SK Sbjct: 79 GKYKKEALEYGGKIIIKDNGHGMSLDEITGIWLEPATDIKSK 120 >gi|315187334|gb|EFU21090.1| DNA gyrase subunit B [Spirochaeta thermophila DSM 6578] Length = 635 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 17/73 (23%) Query: 17 GEIIERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE- 67 GE E + E+++NS+D A SR+E VI G + +TD+G G+ EE Sbjct: 29 GE--EGLHHLVYEVVDNSIDEALAGVCSRIEVVIEPG--NVVTVTDDGRGIPVDLHPEEK 84 Query: 68 ---IPMAVQR-HC 76 + + + R H Sbjct: 85 VSALELVMTRLHA 97 >gi|307719919|ref|YP_003875451.1| DNA gyrase subunit B [Spirochaeta thermophila DSM 6192] gi|306533644|gb|ADN03178.1| DNA gyrase subunit B [Spirochaeta thermophila DSM 6192] Length = 635 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 17/73 (23%) Query: 17 GEIIERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE- 67 GE E + E+++NS+D A SR+E VI G + +TD+G G+ EE Sbjct: 29 GE--EGLHHLVYEVVDNSIDEALAGVCSRIEVVIEPG--NVVTVTDDGRGIPVDLHPEEK 84 Query: 68 ---IPMAVQR-HC 76 + + + R H Sbjct: 85 VSALELVMTRLHA 97 >gi|223558011|gb|ACM91017.1| histidine kinase [uncultured bacterium URE4] Length = 177 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 3/37 (8%) Query: 33 NSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSE 66 NS+ A ++ + + +I DNG GM + Sbjct: 14 NSIRAGATEITIEMEDSAARDLLSIKIIDNGCGMPED 50 >gi|147678975|ref|YP_001213190.1| signal transduction histidine kinase [Pelotomaculum thermopropionicum SI] gi|146275072|dbj|BAF60821.1| hypothetical signal transduction histidine kinase [Pelotomaculum thermopropionicum SI] Length = 582 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 6/45 (13%) Query: 41 RVET-----VIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTSK 79 R+E + G GK + DNG G+ E +P TSK Sbjct: 490 RIEISSSLREVEGEGKKVVVTVRDNGVGIEKENLPKIFNPFYTSK 534 >gi|73697709|gb|AAZ81471.1| DNA gyrase subunit B [Acholeplasma palmae] Length = 588 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 12/55 (21%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 E+++NS+D A + + + ++TDNG G+ H T K Sbjct: 23 EIVDNSIDEALAGYADTITVEVLKDNI--IRVTDNGRGIP------VGIHHKTGK 69 >gi|300932508|ref|ZP_07147764.1| two-component system sensor kinase TcsS1 [Corynebacterium resistens DSM 45100] Length = 539 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 9/61 (14%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N+L DA V+ ++ + +I D+G G+ +E++P +R Sbjct: 424 RLHQVVGNLLTNALRHGGEDA---SVQINLSESQREVSIEIADDGRGIAAEDLPHLFERF 480 Query: 76 C 76 Sbjct: 481 Y 481 >gi|315268236|gb|ADT95089.1| hypothetical protein Sbal678_2940 [Shewanella baltica OS678] Length = 687 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 84/245 (34%), Gaps = 39/245 (15%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAV---------- 72 P+ + E+I N+ DA++++V I K I D+G GM+ ++I Sbjct: 58 PA-VLTEIISNAWDADATKVAISI-DTEKGEVLIVDDGHGMSDQDIKDRFLNVGYARRDD 115 Query: 73 QRHCTSKISDDFSNIHTFGFRGE---ALPSIGAVSHLTLMSRPPQN------------NT 117 +R S+ + + + G +G A+ S+ S + + S+ Sbjct: 116 KR---SRSNSNKRQV--MGRKGIGKLAMFSLA--SKIQVTSKTANGQAIAFEIDVIALQQ 168 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNF-LKSEQVETNLITDVIRRMA 176 + + GT +++ L I + K ++I D Sbjct: 169 AIKTKQDYKAKPIKADFTEPHGTQIKLFKLKKNISRTETYLRKKLARRFSIIGDTHNFKV 228 Query: 177 IAY--PKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 I P S +K ++ +TN + + + I ++ +S EI Sbjct: 229 IINNTPISSADRDFLKELQFLWEIGATNPDRKKECKALKESKVIGGLIDFQGQSYEIR-- 286 Query: 235 GYTGI 239 GY G Sbjct: 287 GYIGS 291 >gi|299137220|ref|ZP_07030402.1| histidine kinase [Acidobacterium sp. MP5ACTX8] gi|298600625|gb|EFI56781.1| histidine kinase [Acidobacterium sp. MP5ACTX8] Length = 248 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 12/85 (14%) Query: 2 KIRK---LSEKIINQIAAGEIIERPSIAIKELIENSLDA----ESSRVETVIAGGGKSFF 54 KIR L + ++ ++ GEI++ I LI N+LDA + + G Sbjct: 119 KIRLVKDLPQGLVAEVYRGEILQ----VISNLIVNALDALPADGAVCIRLRKRRGEIHVI 174 Query: 55 QITDNGFGMTSEEIPMAVQRHCTSK 79 ++DNG G+ +E Q T+K Sbjct: 175 -VSDNGHGIPTEHRDEIFQPFFTTK 198 >gi|238912420|ref|ZP_04656257.1| putative DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 663 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 5/80 (6%) Query: 18 EIIERPSIAIKELIENSLDAESSRVETVIAG---GGKSFFQITDNGFGMTSEEIPMAVQR 74 E +E P AI EL+ N DA + + I I D+G G+ ++ R Sbjct: 22 ESVE-PVQAILELVWNGFDAGAKNININIVYDHFDTVKNLTILDDGDGINFTDLGSNFNR 80 Query: 75 HCTSKISDDFSNIHTFGFRG 94 S + G RG Sbjct: 81 FNDSLKKTSIDQHGSKG-RG 99 >gi|229917451|ref|YP_002886097.1| DNA gyrase, B subunit [Exiguobacterium sp. AT1b] gi|229468880|gb|ACQ70652.1| DNA gyrase, B subunit [Exiguobacterium sp. AT1b] Length = 642 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + G + + DNG G+ + Sbjct: 48 EIVDNSIDEALAGYCDTITVTVEPG--NSIVVEDNGRGIPVD 87 >gi|56206466|emb|CAI25063.1| microrchidia 2A [Mus musculus] Length = 103 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ GG + D+G GM + +Q ++K + + Sbjct: 35 ELVDNARDADATRIDIYAERREDLRGGFMLCFL-DDGAGMDPSDAASVIQFGKSAKRTPE 93 Query: 84 FSNIHTFG 91 + I +G Sbjct: 94 STQIGQYG 101 >gi|3041848|gb|AAC12954.1| Proline-rich protein; weakly similar to Q14149 (PID:g2495706) and A43427 (PID:g284667) [Homo sapiens] Length = 818 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ GG + D+G GM + +Q ++K + + Sbjct: 12 ELVDNARDADATRIDIYAERREDLRGGFMLCFL-DDGAGMDPSDAASVIQFGKSAKRTPE 70 Query: 84 FSNIHTFG 91 + I +G Sbjct: 71 STQIGQYG 78 >gi|309779355|ref|ZP_07674117.1| sensor histidine kinase [Ralstonia sp. 5_7_47FAA] gi|308921913|gb|EFP67548.1| sensor histidine kinase [Ralstonia sp. 5_7_47FAA] Length = 438 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 19/87 (21%) Query: 7 SEKIINQIAAGEIIER-PSIA----------IKELIENSLD---AESSRVETVIA---GG 49 + +I G +E P+ + L++N+L A + RV+ A G Sbjct: 304 PAAVQKRIDLGIAVESQPASVMGNADALRVLLVNLVDNALKYCPAGA-RVDVSTAHTPDG 362 Query: 50 GKSFFQITDNGFGMTSEEIPMAVQRHC 76 G + DNG G+ +EE + R Sbjct: 363 GAQLV-VEDNGPGIPAEERERVLDRFY 388 >gi|332652897|ref|ZP_08418642.1| ATPase [Ruminococcaceae bacterium D16] gi|332518043|gb|EGJ47646.1| ATPase [Ruminococcaceae bacterium D16] Length = 489 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 11/157 (7%) Query: 22 RPSIAIKELIENSLDAESSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 AI ++I+NS+ A +S V+ + F I D+G GMT E+I A++ S + Sbjct: 23 SLESAIADIIDNSIAANASNVDIQFSPYDAVPFISILDDGDGMTKEQINDAMRYGSQSSL 82 Query: 81 SDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNP 138 + + G G L S+ LT++++ G +I + + Sbjct: 83 N--IRDSKDLGRFGLGLKTASLSQCRCLTVITKQ-----GRRIEARRWDLDEIYEKGTWA 135 Query: 139 GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRM 175 + ++ IP LKS + T ++ + + RM Sbjct: 136 LLSLNSEEI-HAIPQFQTQLKSLKSGTLVLWEKLDRM 171 >gi|229526230|ref|ZP_04415634.1| hypothetical protein VCA_000345 [Vibrio cholerae bv. albensis VL426] gi|229336388|gb|EEO01406.1| hypothetical protein VCA_000345 [Vibrio cholerae bv. albensis VL426] Length = 675 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAESSRVE----TV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA S +E ++ + +++DNG G+ E + + Sbjct: 568 QRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPF 627 Query: 76 CTSK 79 TSK Sbjct: 628 QTSK 631 >gi|195537257|dbj|BAG68217.1| DNA gyrase subunit B [Glaciibacter superstes] gi|195537259|dbj|BAG68218.1| DNA gyrase subunit B [Glaciibacter superstes] Length = 621 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A ++ I G ++ DNG G+ + Sbjct: 15 VSEIVDNSVDEALAGYCDTIDIRILADGA--IRVEDNGRGIPVD 56 >gi|153825007|ref|ZP_01977674.1| signal transduction histidine kinase [Vibrio cholerae MZO-2] gi|149741332|gb|EDM55366.1| signal transduction histidine kinase [Vibrio cholerae MZO-2] Length = 684 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAESSRVE----TV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA S +E ++ + +++DNG G+ E + + Sbjct: 577 QRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPF 636 Query: 76 CTSK 79 TSK Sbjct: 637 QTSK 640 >gi|153830711|ref|ZP_01983378.1| putative C4-dicarboxylate transport sensor protein [Vibrio cholerae 623-39] gi|148873808|gb|EDL71943.1| putative C4-dicarboxylate transport sensor protein [Vibrio cholerae 623-39] Length = 684 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAESSRVE----TV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA S +E ++ + +++DNG G+ E + + Sbjct: 577 QRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPF 636 Query: 76 CTSK 79 TSK Sbjct: 637 QTSK 640 >gi|147672217|ref|YP_001215972.1| putative C4-dicarboxylate transport sensor protein [Vibrio cholerae O395] gi|146314600|gb|ABQ19140.1| putative C4-dicarboxylate transport sensor protein [Vibrio cholerae O395] gi|227014769|gb|ACP10978.1| putative C4-dicarboxylate transport sensor protein [Vibrio cholerae O395] Length = 684 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAESSRVE----TV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA S +E ++ + +++DNG G+ E + + Sbjct: 577 QRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPF 636 Query: 76 CTSK 79 TSK Sbjct: 637 QTSK 640 >gi|153802630|ref|ZP_01957216.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae MZO-3] gi|124121846|gb|EAY40589.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae MZO-3] Length = 684 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAESSRVE----TV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA S +E ++ + +++DNG G+ E + + Sbjct: 577 QRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPF 636 Query: 76 CTSK 79 TSK Sbjct: 637 QTSK 640 >gi|229506693|ref|ZP_04396202.1| hypothetical protein VCF_001915 [Vibrio cholerae BX 330286] gi|229510512|ref|ZP_04399992.1| hypothetical protein VCE_001920 [Vibrio cholerae B33] gi|229517357|ref|ZP_04406802.1| hypothetical protein VCC_001378 [Vibrio cholerae RC9] gi|229605167|ref|YP_002875871.1| hypothetical protein VCD_000105 [Vibrio cholerae MJ-1236] gi|229345393|gb|EEO10366.1| hypothetical protein VCC_001378 [Vibrio cholerae RC9] gi|229352957|gb|EEO17897.1| hypothetical protein VCE_001920 [Vibrio cholerae B33] gi|229357044|gb|EEO21962.1| hypothetical protein VCF_001915 [Vibrio cholerae BX 330286] gi|229371653|gb|ACQ62075.1| hypothetical protein VCD_000105 [Vibrio cholerae MJ-1236] Length = 675 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAESSRVE----TV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA S +E ++ + +++DNG G+ E + + Sbjct: 568 QRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPF 627 Query: 76 CTSK 79 TSK Sbjct: 628 QTSK 631 >gi|15600911|ref|NP_232541.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae O1 biovar eltor str. N16961] gi|121587978|ref|ZP_01677731.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae 2740-80] gi|121729675|ref|ZP_01682136.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae V52] gi|153823650|ref|ZP_01976317.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae B33] gi|227811767|ref|YP_002811777.1| putative C4-dicarboxylate transport sensor protein [Vibrio cholerae M66-2] gi|254850408|ref|ZP_05239758.1| C4-dicarboxylate transport sensor protein [Vibrio cholerae MO10] gi|255746043|ref|ZP_05419990.1| signal transduction histidine kinase [Vibrio cholera CIRS 101] gi|262162119|ref|ZP_06031134.1| signal transduction histidine kinase [Vibrio cholerae INDRE 91/1] gi|262167053|ref|ZP_06034769.1| signal transduction histidine kinase [Vibrio cholerae RC27] gi|298500001|ref|ZP_07009807.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9657529|gb|AAF96054.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547776|gb|EAX57865.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae 2740-80] gi|121628573|gb|EAX61053.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae V52] gi|126518833|gb|EAZ76056.1| C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae B33] gi|227010909|gb|ACP07120.1| putative C4-dicarboxylate transport sensor protein [Vibrio cholerae M66-2] gi|254846113|gb|EET24527.1| C4-dicarboxylate transport sensor protein [Vibrio cholerae MO10] gi|255735797|gb|EET91195.1| signal transduction histidine kinase [Vibrio cholera CIRS 101] gi|262024508|gb|EEY43193.1| signal transduction histidine kinase [Vibrio cholerae RC27] gi|262028194|gb|EEY46852.1| signal transduction histidine kinase [Vibrio cholerae INDRE 91/1] gi|297541982|gb|EFH78033.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 684 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDAESSRVE----TV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R + L+ N+LDA S +E ++ + +++DNG G+ E + + Sbjct: 577 QRLRQVLGNLVSNALDAMSQTLEPKLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPF 636 Query: 76 CTSK 79 TSK Sbjct: 637 QTSK 640 >gi|228477165|ref|ZP_04061803.1| DNA gyrase, B subunit [Streptococcus salivarius SK126] gi|228251184|gb|EEK10355.1| DNA gyrase, B subunit [Streptococcus salivarius SK126] Length = 650 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFATHIQVFIEPD--NSITVVDDGRGIPVD 90 >gi|198245723|ref|YP_002218089.1| sensor protein ZraS [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205357423|ref|ZP_02347567.2| sensor protein ZraS [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|197940239|gb|ACH77572.1| sensor protein ZraS [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205321829|gb|EDZ09668.1| sensor protein ZraS [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 465 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 8/65 (12%) Query: 21 ERPSIAIKELIENSLDA----ESSRVETVIAGGGKSF--FQITDNGFGMTSEEIPMAVQR 74 +R + + L N++ A + G +TDNG G+ +++ Sbjct: 357 DRLTQVLLNLYLNAIHAIGRQG--TISVEAKESGTDRVIITVTDNGKGIAPDQLEAIFTP 414 Query: 75 HCTSK 79 + T+K Sbjct: 415 YFTTK 419 >gi|115381164|gb|ABI96231.1| DNA topoisomerase IV subunit B [Entomoplasma melaleucae] Length = 553 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 13/55 (23%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 E+++NS+D A +S ++ V+ G +TDNG G+ H T K Sbjct: 14 EIVDNSIDEALAGHASEIDVVLEKNG--SVTVTDNGRGVP-------TGMHATGK 59 >gi|119470529|ref|ZP_01613232.1| DNA topoisomerase IV subunit B [Alteromonadales bacterium TW-7] gi|119446230|gb|EAW27507.1| DNA topoisomerase IV subunit B [Alteromonadales bacterium TW-7] Length = 629 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 79/218 (36%), Gaps = 32/218 (14%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A +++++ ++ + +++D+G GM EE I Sbjct: 32 RPNHLGQEVIDNSVDEAMAGHATKIDVILHED--NSLEVSDDGRGMPIDIHPEEGIPGIE 89 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEK 127 + + H K S+ + G G + + A+S + + R ++A Sbjct: 90 LIFTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSTRVEVTVRRDAQQ--YRMAFENGD 146 Query: 128 ISSVRPVAM-----NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 V N GT V A ++ S + +++ A+ P + Sbjct: 147 KVEDLNVIGTVGKRNTGTTVRFW-------ADASYFDSANYSITKLNHLLKAKAVLCPGL 199 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 F K + + G I V G + + Sbjct: 200 RIKF-VNKQTKETQEWFYETGLKDYLIEAVKGFETLPQ 236 >gi|126175769|ref|YP_001051918.1| DNA topoisomerase IV subunit B [Shewanella baltica OS155] gi|160873940|ref|YP_001553256.1| DNA topoisomerase IV subunit B [Shewanella baltica OS195] gi|217972001|ref|YP_002356752.1| DNA topoisomerase IV subunit B [Shewanella baltica OS223] gi|304411164|ref|ZP_07392779.1| DNA topoisomerase IV, B subunit [Shewanella baltica OS183] gi|307306459|ref|ZP_07586202.1| DNA topoisomerase IV, B subunit [Shewanella baltica BA175] gi|125998974|gb|ABN63049.1| DNA topoisomerase IV subunit B [Shewanella baltica OS155] gi|160859462|gb|ABX47996.1| DNA topoisomerase IV, B subunit [Shewanella baltica OS195] gi|217497136|gb|ACK45329.1| DNA topoisomerase IV, B subunit [Shewanella baltica OS223] gi|304350357|gb|EFM14760.1| DNA topoisomerase IV, B subunit [Shewanella baltica OS183] gi|306910750|gb|EFN41178.1| DNA topoisomerase IV, B subunit [Shewanella baltica BA175] gi|315266172|gb|ADT93025.1| DNA topoisomerase IV, B subunit [Shewanella baltica OS678] Length = 628 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 82/212 (38%), Gaps = 29/212 (13%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A ++++E V+ + ++TD+G GM EE + Sbjct: 31 RPNHLGQEVIDNSVDEALAGHATKIEVVLHTD--NSLEVTDDGRGMPVDIHPEEGIPGVE 88 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAISG 125 + + + H K S+ + G G + + A+S + + R + + Sbjct: 89 LILTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSRRVEVTVRRDGQVYDIAFENGFKV 147 Query: 126 EKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF 184 E++ N GT V ++ S + + ++R A+ P + Sbjct: 148 EELRPTGTCGRRNTGTRVHFW-------PDASYFDSANFSNSKLIYLLRAKAVLCPGLRI 200 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQVIGED 216 F+ +++ + + IG++ Sbjct: 201 KFTN--KQTNEVHEWFYESGLTDYLKAAIGDN 230 >gi|297159195|gb|ADI08907.1| histidine kinase [Streptomyces bingchenggensis BCW-1] Length = 746 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Query: 29 ELIENSLDAESSRVETVIA---GGGKSFFQITDNGFGMTSE 66 EL++N+ DA++S V G+ ++ DNG GM+ Sbjct: 34 ELVKNAYDADASLVLIRFNPPLEEGEGSIEVWDNGHGMSPA 74 >gi|188588850|ref|YP_001919803.1| two-component sensor histidine kinase [Clostridium botulinum E3 str. Alaska E43] gi|188499131|gb|ACD52267.1| two-component sensor histidine kinase [Clostridium botulinum E3 str. Alaska E43] Length = 471 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 25 IAIKELIENSLD-AESSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHCT 77 I L++N++ +E + ++ + I DNG G+ E++ + T Sbjct: 367 QVILNLLDNAIKYSECTEIDIYMENNEDYEIIYIIDNGQGIPKEDLKNVFENFYT 421 >gi|73661314|ref|YP_300095.1| DNA gyrase subunit B [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72493829|dbj|BAE17150.1| DNA gyrase subunit B [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 641 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + +E VI ++ ++TDNG G+ Sbjct: 46 EIVDNSIDEALAGYADTIEVVIEKD--NWIKVTDNGRGIP 83 >gi|84386130|ref|ZP_00989159.1| C4-dicarboxylate transport sensor protein, putative [Vibrio splendidus 12B01] gi|84378900|gb|EAP95754.1| C4-dicarboxylate transport sensor protein, putative [Vibrio splendidus 12B01] Length = 687 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDA--ESSRVETVIA---GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + LI N++DA + VI+ + ++ DNG G++ +++ + Sbjct: 579 RLRQVLGNLIRNAVDATQNQTPATIVISAHTDQQRVIIKVQDNGCGVSEDQLETIFEPFH 638 Query: 77 TSK 79 T+K Sbjct: 639 TNK 641 >gi|317127847|ref|YP_004094129.1| hypothetical protein Bcell_1129 [Bacillus cellulosilyticus DSM 2522] gi|315472795|gb|ADU29398.1| hypothetical protein Bcell_1129 [Bacillus cellulosilyticus DSM 2522] Length = 477 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 6/87 (6%) Query: 31 IENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHT- 89 ++NS+ A++ ++ V + F I D+G GM+++E+ A R T+ D + T Sbjct: 32 LDNSITAKAKNIQIVCIPNPNTVFTILDDGNGMSNDELIDA-MRLATN--DPDSTREETD 88 Query: 90 FGFRGEAL--PSIGAVSHLTLMSRPPQ 114 G G L S + LT++S+ Sbjct: 89 LGRFGLGLKTASFSQCTDLTVISKKDG 115 >gi|229824639|ref|ZP_04450708.1| hypothetical protein GCWU000282_01986 [Catonella morbi ATCC 51271] gi|229786010|gb|EEP22124.1| hypothetical protein GCWU000282_01986 [Catonella morbi ATCC 51271] Length = 640 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 6/54 (11%) Query: 17 GEIIERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 I + E+++NS+D A +E I + + DNG G+ + Sbjct: 35 STSIVGLHHLVWEIVDNSIDEALAGYCDHIEVTIEAN--NSITVQDNGRGIPVD 86 >gi|111023581|ref|YP_706553.1| sensory histidine kinase [Rhodococcus jostii RHA1] gi|110823111|gb|ABG98395.1| sensory histidine kinase [Rhodococcus jostii RHA1] Length = 538 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 41/123 (33%), Gaps = 34/123 (27%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLD-------AESSRVETVI-AGGGKSFFQ 55 L ++ A ++I + LI+N++D A R+ I G + Sbjct: 423 HALDPEL-----ATDVIT----VLGNLIDNAVDVSEGGRDA---RISIRITDDDGI-LIE 469 Query: 56 ITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN 115 + D+G G+ R TSK T G RG L + L+S Sbjct: 470 VADSGPGVPESMREEIFSRGVTSK-------PGTPGGRGIGLA------LVRLVSSQHGG 516 Query: 116 NTG 118 + Sbjct: 517 SAA 519 >gi|104783312|ref|YP_609810.1| sensor histidine kinase [Pseudomonas entomophila L48] gi|95112299|emb|CAK17026.1| putative sensor histidine kinase [Pseudomonas entomophila L48] Length = 585 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAES----SRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + R+E I + D+G G+ ++ Sbjct: 476 RLEQVLINLLRNALDAMADKRYKRLEIRIEADASLWRLSVLDSGGGIADADLAKVFDPFF 535 Query: 77 TSK 79 T+K Sbjct: 536 TTK 538 >gi|47497337|dbj|BAD19378.1| ATP-binding region, ATPase-like domain-containing protein-like [Oryza sativa Japonica Group] Length = 331 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 11/71 (15%) Query: 29 ELIENSLD--A-ESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++NSLD A ++ V + G + D+G GM +++ + + SK+ Sbjct: 153 ELLDNSLDEVANGATYVNIDMLENKKDGTRMVSVEDDGGGMDPDKMWHCMSLGYSAKSKV 212 Query: 81 SDDFSNIHTFG 91 D I +G Sbjct: 213 KD---TIGQYG 220 >gi|217965929|ref|YP_002351607.1| DNA gyrase, B subunit [Listeria monocytogenes HCC23] gi|217335199|gb|ACK40993.1| DNA gyrase, B subunit [Listeria monocytogenes HCC23] gi|307569529|emb|CAR82708.1| DNA gyrase, B subunit [Listeria monocytogenes L99] Length = 646 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A + +E I + + DNG G+ Sbjct: 52 EIVDNAIDEALAGFCTEIEITIEAD--NSITVRDNGRGIP 89 >gi|212637854|ref|YP_002314374.1| DNA gyrase subunit B [Anoxybacillus flavithermus WK1] gi|212559334|gb|ACJ32389.1| DNA gyrase subunit B [Anoxybacillus flavithermus WK1] Length = 640 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + ++ + + DNG G+ Sbjct: 47 EIVDNSIDEALAGFCTEINVIVEED--NSITVIDNGRGIP 84 >gi|77165746|ref|YP_344271.1| DNA topoisomerase IV subunit B [Nitrosococcus oceani ATCC 19707] gi|254433384|ref|ZP_05046892.1| DNA topoisomerase IV, B subunit [Nitrosococcus oceani AFC27] gi|76884060|gb|ABA58741.1| DNA topoisomerase IV subunit B [Nitrosococcus oceani ATCC 19707] gi|207089717|gb|EDZ66988.1| DNA topoisomerase IV, B subunit [Nitrosococcus oceani AFC27] Length = 628 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 71/217 (32%), Gaps = 41/217 (18%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 +RP+ +E+I+NS+D A +++++ V+ G + D+G GM EE + Sbjct: 30 QRPNHLAQEVIDNSVDEAIAGFATQIDVVLQPDG--SLTVCDDGRGMPVDLHPEERLPGV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRG----------EALPSIGAVSHLTLMSRPPQNNT 117 + + R H K S ++ F G AL S L + R Sbjct: 88 EVILTRLHAGGKFSS-----KSYRFAGGLHGVGVSVVNALSS-----RLEVWVRREGCEY 137 Query: 118 GAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 A + + V + F + + + ++R A+ Sbjct: 138 HIAFANGERVSALKAINKVGKRNTGTVLRFW----PDPVFFDTPKFAVARLKHILRAKAV 193 Query: 178 AYPK--VSFTFSTIKSNRYKMNFQSTNGNFPERISQV 212 P V+F+ + + + ++ Sbjct: 194 LCPGLCVTFSDVATGETVNWRYQEGLLAYLRDELREL 230 >gi|312863428|ref|ZP_07723666.1| DNA gyrase, B subunit [Streptococcus vestibularis F0396] gi|322516316|ref|ZP_08069243.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus vestibularis ATCC 49124] gi|311100964|gb|EFQ59169.1| DNA gyrase, B subunit [Streptococcus vestibularis F0396] gi|322125185|gb|EFX96572.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus vestibularis ATCC 49124] Length = 650 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFATHIKVFIEPD--NSITVVDDGRGIPVD 90 >gi|301759519|ref|XP_002915642.1| PREDICTED: MORC family CW-type zinc finger protein 2-like [Ailuropoda melanoleuca] Length = 1178 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ GG + D+G GM + +Q ++K + + Sbjct: 177 ELVDNARDADATRIDIYAERREDLRGGFMLCFL-DDGAGMDPSDAASVIQFGKSAKRTPE 235 Query: 84 FSNIHTFG 91 + I +G Sbjct: 236 STQIGQYG 243 >gi|296191676|ref|XP_002743749.1| PREDICTED: MORC family CW-type zinc finger protein 2-like [Callithrix jacchus] Length = 1091 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ GG + D+G GM + +Q ++K + + Sbjct: 186 ELVDNARDADATRIDIYAERREDLRGGFMLCFL-DDGAGMDPSDAASVIQFGKSAKRTPE 244 Query: 84 FSNIHTFG 91 + I +G Sbjct: 245 STQIGQYG 252 >gi|262172781|ref|ZP_06040459.1| DNA gyrase subunit B [Vibrio mimicus MB-451] gi|261893857|gb|EEY39843.1| DNA gyrase subunit B [Vibrio mimicus MB-451] Length = 805 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + I + ++D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGYCKDIVVTIHED--NSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L++ Q G + + V Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKVLLTIYRGGKIHTQTYHHGVPQAPLSVVG 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T VR P+ F + + +++ +R ++ VS + + K Sbjct: 159 ETERTGTTVRF----WPSAQTFT-NIEFHYDILAKRLRELSFLNSGVSIKLTDEREEDKK 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 +F G ++ + + + +N G Y F N Sbjct: 214 DHFMYEGG-IQAFVTHLNRNKTPIHEKVFHFNQEREDGISVEVAMQWNDGFQENIYCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|258622961|ref|ZP_05717976.1| DNA gyrase, subunit B [Vibrio mimicus VM573] gi|258626085|ref|ZP_05720936.1| DNA gyrase, subunit B [Vibrio mimicus VM603] gi|258581611|gb|EEW06509.1| DNA gyrase, subunit B [Vibrio mimicus VM603] gi|258584744|gb|EEW09478.1| DNA gyrase, subunit B [Vibrio mimicus VM573] Length = 805 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + I + ++D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGYCKDIVVTIHED--NSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L++ Q G + + V Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKVLLTIYRGGKIHTQTYHHGVPQAPLSVVG 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T VR P+ F + + +++ +R ++ VS + + K Sbjct: 159 ETERTGTTVRF----WPSAQTFT-NIEFHYDILAKRLRELSFLNSGVSIKLTDEREEDKK 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 +F G ++ + + + +N G Y F N Sbjct: 214 DHFMYEGG-IQAFVTHLNRNKTPIHEKVFHFNQEREDGISVEVAMQWNDGFQENIYCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|257052540|ref|YP_003130373.1| PAS/PAC sensor signal transduction histidine kinase [Halorhabdus utahensis DSM 12940] gi|256691303|gb|ACV11640.1| PAS/PAC sensor signal transduction histidine kinase [Halorhabdus utahensis DSM 12940] Length = 663 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Query: 20 IERPSIAIKELIENSL---DAESSRVETVIAGGG-KSFFQITDNGFGMTS 65 +++ AIKEL+EN++ D S V + G + D+G G+ Sbjct: 553 VDQLDRAIKELVENAVTHSDRSSPSVTVSVDTNGDIVEISVADDGPGIPE 602 >gi|223983625|ref|ZP_03633803.1| hypothetical protein HOLDEFILI_01084 [Holdemania filiformis DSM 12042] gi|223964392|gb|EEF68726.1| hypothetical protein HOLDEFILI_01084 [Holdemania filiformis DSM 12042] Length = 328 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ +E + ++ + DNG GM E Sbjct: 45 EIVDNSIDEALAGYATEIEISVDP--QNIVTVEDNGRGMPVE 84 >gi|198283802|ref|YP_002220123.1| DNA topoisomerase IV subunit B [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666865|ref|YP_002426433.1| DNA topoisomerase IV, subunit B [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248323|gb|ACH83916.1| DNA topoisomerase (ATP-hydrolyzing) [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519078|gb|ACK79664.1| DNA topoisomerase IV, subunit B [Acidithiobacillus ferrooxidans ATCC 23270] Length = 656 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 6/48 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 P+ I+E+I+N+ D A ++R++ + G + DNG G+ Sbjct: 28 TCPTHVIQEVIDNAADEALAGQATRIDVTVCEDG--SVIVEDNGRGIP 73 >gi|167922014|ref|ZP_02509105.1| sensor histidine kinase [Burkholderia pseudomallei BCC215] Length = 459 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Query: 30 LIENSL---DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A + RV+ I GG ++ DNG G+ + + +R Sbjct: 355 LVDNAIRYAGAGA-RVDVDARIDAGGTPVLEVRDNGPGIPAADRERVWERFY 405 >gi|167827363|ref|ZP_02458834.1| sensor histidine kinase [Burkholderia pseudomallei 9] Length = 107 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Query: 30 LIENSL---DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A + RV+ I GG ++ DNG G+ + + +R Sbjct: 3 LVDNAIRYAGAGA-RVDVDARIDAGGTPVLEVRDNGPGIPAADRERVWERFY 53 >gi|167818983|ref|ZP_02450663.1| sensor histidine kinase [Burkholderia pseudomallei 91] Length = 210 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Query: 30 LIENSL---DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A + RV+ I GG ++ DNG G+ + + +R Sbjct: 106 LVDNAIRYAGAGA-RVDVDARIDAGGTPVLEVRDNGPGIPAADRERVWERFY 156 >gi|167741801|ref|ZP_02414575.1| sensor histidine kinase [Burkholderia pseudomallei 14] Length = 284 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Query: 30 LIENSL---DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A + RV+ I GG ++ DNG G+ + + +R Sbjct: 180 LVDNAIRYAGAGA-RVDVDARIDAGGTPVLEVRDNGPGIPAADRERVWERFY 230 >gi|167722820|ref|ZP_02406056.1| sensor histidine kinase [Burkholderia pseudomallei DM98] Length = 135 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Query: 30 LIENSL---DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A + RV+ I GG ++ DNG G+ + + +R Sbjct: 31 LVDNAIRYAGAGA-RVDVDARIDAGGTPVLEVRDNGPGIPAADRERVWERFY 81 >gi|149914993|ref|ZP_01903522.1| C4-dicarboxylate transport sensor protein DctB, putative [Roseobacter sp. AzwK-3b] gi|149811181|gb|EDM71018.1| C4-dicarboxylate transport sensor protein DctB, putative [Roseobacter sp. AzwK-3b] Length = 586 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 8/55 (14%) Query: 30 LIENSLDA-----ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N++DA ++S ++ ++A G + + DNG G+ E+ + T+K Sbjct: 484 LLRNAMDATEGTDDAS-IDILLAAGETAVLTVRDNGHGI--EDFDNLFEPFYTTK 535 >gi|134278952|ref|ZP_01765665.1| sensor histidine kinase [Burkholderia pseudomallei 305] gi|134249371|gb|EBA49452.1| sensor histidine kinase [Burkholderia pseudomallei 305] Length = 459 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Query: 30 LIENSL---DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A + RV+ I GG ++ DNG G+ + + +R Sbjct: 355 LVDNAIRYAGAGA-RVDVDARIDAGGTPVLEVRDNGPGIPAADRERVWERFY 405 >gi|91762418|ref|ZP_01264383.1| DNA topoisomerase (ATP-hydrolyzing) chain B (DNA gyrase B) [Candidatus Pelagibacter ubique HTCC1002] gi|91718220|gb|EAS84870.1| DNA topoisomerase (ATP-hydrolyzing) chain B (DNA gyrase B) [Candidatus Pelagibacter ubique HTCC1002] Length = 685 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 33/257 (12%), Positives = 78/257 (30%), Gaps = 28/257 (10%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP---------MAVQ 73 + E+++NS+D A ++ I G + D+G G+ + + Q Sbjct: 42 VYEVVDNSIDEALAGHCKNIDVKINSDGT--ITVRDDGRGIPVDMHKGEKMSAAEVIMTQ 99 Query: 74 RHCTSKISDDFSNIHTFGFRGEALPSIGAVS---HLTLMSRPPQNNTGAQIAISGEKISS 130 H K D + + G G + + A+S L + N G + Sbjct: 100 LHAGGKFDHDSYKV-SGGLHGVGVSVVNALSEKLKLEI---DRDGNRYFIEFKDGASKAP 155 Query: 131 VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 ++ + + T ++ S + ++I +R +A + T + + Sbjct: 156 LKVIGKSKETGTQIT-----FLPSKEIFSSIKFTPSIIIKRMRELAFLNKGIKITVNDLN 210 Query: 191 SNRYKMNFQSTNGNFPERISQVI-GEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ 249 + K+ +G E + + + + N + I ++G Sbjct: 211 QKKEKIIVFKFDGGVLEFVDFLDEKREKLVNKTGNDLFKKPIYIEGKKDNIEIECSLKWN 270 Query: 250 FYVFINGRTVQDKFILS 266 + + Sbjct: 271 ASYGEDIYPYTNNIYQK 287 >gi|71083152|ref|YP_265871.1| DNA topoisomerase (ATP-hydrolyzing) chain B (DNA gyrase B) [Candidatus Pelagibacter ubique HTCC1062] gi|71062265|gb|AAZ21268.1| DNA topoisomerase (ATP-hydrolyzing) chain B (DNA gyrase B) [Candidatus Pelagibacter ubique HTCC1062] Length = 685 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 33/257 (12%), Positives = 78/257 (30%), Gaps = 28/257 (10%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP---------MAVQ 73 + E+++NS+D A ++ I G + D+G G+ + + Q Sbjct: 42 VYEVVDNSIDEALAGHCKNIDVKINSDGT--ITVRDDGRGIPVDMHKGEKMSAAEVIMTQ 99 Query: 74 RHCTSKISDDFSNIHTFGFRGEALPSIGAVS---HLTLMSRPPQNNTGAQIAISGEKISS 130 H K D + + G G + + A+S L + N G + Sbjct: 100 LHAGGKFDHDSYKV-SGGLHGVGVSVVNALSEKLKLEI---DRDGNRYFIEFKDGASKAP 155 Query: 131 VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 ++ + + T ++ S + ++I +R +A + T + + Sbjct: 156 LKVIGKSKETGTQIT-----FLPSKEIFSSIKFTPSIIIKRMRELAFLNKGIKITVNDLN 210 Query: 191 SNRYKMNFQSTNGNFPERISQVI-GEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ 249 + K+ +G E + + + + N + I ++G Sbjct: 211 QKKEKIIVFKFDGGVLEFVDFLDEKREKLVNKTGNDLFKKPIYIEGKKDNIEIECSLKWN 270 Query: 250 FYVFINGRTVQDKFILS 266 + + Sbjct: 271 ASYGEDIYPYTNNIYQK 287 >gi|23978230|dbj|BAC21111.1| DNA gyrase B subunit [Anabaena variabilis] Length = 396 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 80/265 (30%), Gaps = 58/265 (21%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC-TSKIS 81 + E+++NS+D A + +E I G +TD+G G+ + H T K Sbjct: 10 VYEVVDNSIDEALAGYCTHIEVEINADG--SVAVTDDGRGIPIDT-------HSRTGK-- 58 Query: 82 DDFSNIHTFGFRGEALPS-------------------IG---AVSHLTLMSRPPQNNTGA 119 + T L + I A+S + ++ Sbjct: 59 SALETVMTV------LHAGGKFGGGGYKVSGGLHGVGISVVNALSEVVEVTVWRDKKVHT 112 Query: 120 QIAIS---GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 Q ++ + GT V + P F S + + I+ +R +A Sbjct: 113 QRYERGVPVTELITNPYKEARTGTSVTFK------PDTQIFTNSIEFDYITISGRLRELA 166 Query: 177 IAYPKVSFTFSTI-----KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEI 231 V TF+ KS+ K+ G E I+ + + + + + Sbjct: 167 YLNAGVKITFTDNRLELLKSDTPKVESYEYKGGIKEYIAYMNRDKQPLHEEIIYVQGERN 226 Query: 232 TLQGYTGIPTFNRGNANQFYVFING 256 +Q + + F N Sbjct: 227 NVQIEVSLQWCTDAYTDNVLGFANN 251 >gi|154245229|ref|YP_001416187.1| integral membrane sensor signal transduction histidine kinase [Xanthobacter autotrophicus Py2] gi|154159314|gb|ABS66530.1| integral membrane sensor signal transduction histidine kinase [Xanthobacter autotrophicus Py2] Length = 449 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 16/73 (21%) Query: 8 EKIINQIAAGEIIERPSIAI------------KELIENSLD--AESSRVETVIAGGGKSF 53 ++I + + E+I P+ + + LIEN+LD E++ + + Sbjct: 318 PQVIARNRSIEVIAGPAPVVVAGGRDDVFRAVRNLIENALDHTPEATTISVEVTDAPA-- 375 Query: 54 FQITDNGFGMTSE 66 ++ D+G G +E Sbjct: 376 IRVRDHGPGFPAE 388 >gi|126456542|ref|YP_001074901.1| sensor histidine kinase [Burkholderia pseudomallei 1106a] gi|242312925|ref|ZP_04811942.1| sensor histidine kinase [Burkholderia pseudomallei 1106b] gi|126230310|gb|ABN93723.1| sensor histidine kinase [Burkholderia pseudomallei 1106a] gi|242136164|gb|EES22567.1| sensor histidine kinase [Burkholderia pseudomallei 1106b] Length = 459 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Query: 30 LIENSL---DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A + RV+ I GG ++ DNG G+ + + +R Sbjct: 355 LVDNAIRYAGAGA-RVDVDARIDAGGTPVLEVRDNGPGIPAADRERVWERFY 405 >gi|167848845|ref|ZP_02474353.1| sensor histidine kinase [Burkholderia pseudomallei B7210] gi|254189660|ref|ZP_04896169.1| sensor histidine kinase [Burkholderia pseudomallei Pasteur 52237] gi|157937337|gb|EDO93007.1| sensor histidine kinase [Burkholderia pseudomallei Pasteur 52237] Length = 459 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Query: 30 LIENSL---DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A + RV+ I GG ++ DNG G+ + + +R Sbjct: 355 LVDNAIRYAGAGA-RVDVDARIDAGGTPVLEVRDNGPGIPAADRERVWERFY 405 >gi|126445224|ref|YP_001061956.1| sensor histidine kinase [Burkholderia pseudomallei 668] gi|254193182|ref|ZP_04899617.1| sensor histidine kinase [Burkholderia pseudomallei S13] gi|126224715|gb|ABN88220.1| sensor histidine kinase [Burkholderia pseudomallei 668] gi|169649936|gb|EDS82629.1| sensor histidine kinase [Burkholderia pseudomallei S13] Length = 459 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Query: 30 LIENSL---DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A + RV+ I GG ++ DNG G+ + + +R Sbjct: 355 LVDNAIRYAGAGA-RVDVDARIDAGGTPVLEVRDNGPGIPAADRERVWERFY 405 >gi|53717561|ref|YP_105536.1| sensor histidine kinase [Burkholderia mallei ATCC 23344] gi|53721676|ref|YP_110661.1| sensor kinase protein [Burkholderia pseudomallei K96243] gi|67639686|ref|ZP_00438525.1| sensor histidine kinase [Burkholderia mallei GB8 horse 4] gi|124381820|ref|YP_001023875.1| sensor histidine kinase [Burkholderia mallei NCTC 10229] gi|126445924|ref|YP_001078754.1| sensor histidine kinase [Burkholderia mallei NCTC 10247] gi|166999355|ref|ZP_02265196.1| sensor histidine kinase [Burkholderia mallei PRL-20] gi|167897443|ref|ZP_02484845.1| sensor histidine kinase [Burkholderia pseudomallei 7894] gi|167905798|ref|ZP_02493003.1| sensor histidine kinase [Burkholderia pseudomallei NCTC 13177] gi|167914105|ref|ZP_02501196.1| sensor histidine kinase [Burkholderia pseudomallei 112] gi|217418353|ref|ZP_03449860.1| sensor histidine kinase [Burkholderia pseudomallei 576] gi|226195270|ref|ZP_03790861.1| sensor histidine kinase [Burkholderia pseudomallei Pakistan 9] gi|237508485|ref|ZP_04521200.1| sensor histidine kinase [Burkholderia pseudomallei MSHR346] gi|254179177|ref|ZP_04885829.1| sensor histidine kinase [Burkholderia mallei ATCC 10399] gi|254183004|ref|ZP_04889596.1| sensor histidine kinase [Burkholderia pseudomallei 1655] gi|254204352|ref|ZP_04910709.1| sensor histidine kinase [Burkholderia mallei FMH] gi|254209236|ref|ZP_04915583.1| sensor histidine kinase [Burkholderia mallei JHU] gi|254264292|ref|ZP_04955157.1| sensor histidine kinase [Burkholderia pseudomallei 1710a] gi|254299934|ref|ZP_04967380.1| sensor histidine kinase [Burkholderia pseudomallei 406e] gi|254356522|ref|ZP_04972797.1| sensor histidine kinase [Burkholderia mallei 2002721280] gi|52212090|emb|CAH38099.1| sensor kinase protein [Burkholderia pseudomallei K96243] gi|52423531|gb|AAU47101.1| sensor histidine kinase [Burkholderia mallei ATCC 23344] gi|124289840|gb|ABM99109.1| sensor histidine kinase [Burkholderia mallei NCTC 10229] gi|126238778|gb|ABO01890.1| sensor histidine kinase [Burkholderia mallei NCTC 10247] gi|147744775|gb|EDK51858.1| sensor histidine kinase [Burkholderia mallei FMH] gi|147750459|gb|EDK57529.1| sensor histidine kinase [Burkholderia mallei JHU] gi|148025549|gb|EDK83672.1| sensor histidine kinase [Burkholderia mallei 2002721280] gi|157809966|gb|EDO87136.1| sensor histidine kinase [Burkholderia pseudomallei 406e] gi|160694504|gb|EDP84514.1| sensor histidine kinase [Burkholderia mallei ATCC 10399] gi|184213537|gb|EDU10580.1| sensor histidine kinase [Burkholderia pseudomallei 1655] gi|217397657|gb|EEC37672.1| sensor histidine kinase [Burkholderia pseudomallei 576] gi|225933075|gb|EEH29071.1| sensor histidine kinase [Burkholderia pseudomallei Pakistan 9] gi|235000690|gb|EEP50114.1| sensor histidine kinase [Burkholderia pseudomallei MSHR346] gi|238520279|gb|EEP83740.1| sensor histidine kinase [Burkholderia mallei GB8 horse 4] gi|243064652|gb|EES46838.1| sensor histidine kinase [Burkholderia mallei PRL-20] gi|254215294|gb|EET04679.1| sensor histidine kinase [Burkholderia pseudomallei 1710a] Length = 459 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Query: 30 LIENSL---DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A + RV+ I GG ++ DNG G+ + + +R Sbjct: 355 LVDNAIRYAGAGA-RVDVDARIDAGGTPVLEVRDNGPGIPAADRERVWERFY 405 >gi|320354954|ref|YP_004196293.1| integral membrane sensor signal transduction histidine kinase [Desulfobulbus propionicus DSM 2032] gi|320123456|gb|ADW19002.1| integral membrane sensor signal transduction histidine kinase [Desulfobulbus propionicus DSM 2032] Length = 547 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 30 LIENSLDA-ESS-RVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTSK 79 LIENSLDA S +++ + K QI DNG G+ E + + T+K Sbjct: 451 LIENSLDAVGSGGQIDITTSRSPKEVSIQIADNGPGIKPEVLAKIWEPFFTTK 503 >gi|307265850|ref|ZP_07547400.1| integral membrane sensor signal transduction histidine kinase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919125|gb|EFN49349.1| integral membrane sensor signal transduction histidine kinase [Thermoanaerobacter wiegelii Rt8.B1] Length = 457 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 11/59 (18%) Query: 27 IKELI----ENSLDAESS----RVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 IKELI +N+ A+ + +E + K++ +I D+G G+ E+IP R Sbjct: 351 IKELIRIFLDNA--AKYTSSDGNIEIDVGKDNSKAYIKIKDDGIGIPQEDIPHIFDRFY 407 >gi|289433379|ref|YP_003463251.1| DNA gyrase, B subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289169623|emb|CBH26157.1| DNA gyrase, B subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 646 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A + +E I + + DNG G+ Sbjct: 52 EIVDNAIDEALAGFCTEIEITIEAD--NSITVRDNGRGIP 89 >gi|116871712|ref|YP_848493.1| hypothetical protein lwe0292 [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740590|emb|CAK19710.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 641 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 67/174 (38%), Gaps = 22/174 (12%) Query: 29 ELIENSLDAESSRVET--VIAGGGKSFFQITDNGFGMTSE-----EIPMAVQRHCTSKIS 81 ELI N+ DA++ V I ++ + D+G GM+ E + T+ ++ Sbjct: 32 ELIANAYDADAKNVYVIDRIDE--ENKLIVEDDGSGMSYENKDVKNFLSVAKESRTNVVN 89 Query: 82 D--DFSNIHTFGFRGEA-LPSIGAVSH-LTLMSRPPQNNTGA--------QIAISGEKIS 129 +N G +G L S+ +VS + + + +G + + + + Sbjct: 90 SYTKVNNRRKMGRKGVGKLASL-SVSENVNIKTIKDGEKSGFVLSRKVINKKLEAINEDT 148 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 N GT +E+ + + +P L+ + + ++ + D R+ + Sbjct: 149 INFIKIKNHGTAIEMTNPTYKLPVHLSTMANNLLKIFPLVDETFRIHLIRGDKH 202 >gi|94502204|ref|ZP_01308699.1| DNA gyrase subunit B [Oceanobacter sp. RED65] gi|94425665|gb|EAT10678.1| DNA gyrase subunit B [Oceanobacter sp. RED65] Length = 808 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 39/250 (15%), Positives = 74/250 (29%), Gaps = 29/250 (11%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A S + VI ++DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCSEIRVVIHPD--ESISVSDNGRGIPTDIHPEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+S L + R + Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSNKLKMTIRRAGKVWEQSYTMGVPDAPLAEVG 160 Query: 135 AMN-PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNR 193 GT + + + + +R ++ V +S+R Sbjct: 161 NTETSGTTIH-------FHPSPETFTNIHFNYDHLAKRLRELSFLNSGVRIVLKDERSDR 213 Query: 194 YKMNFQSTNGNFPERISQVIGEDFINNAVELNE--KSNEITLQGYTGIPTFNRGNANQFY 251 ++ G + + N + + N G +N + Y Sbjct: 214 EEV--FEFEGGLKSFVEYLNTNKTALNDIFHFQLEGDNREDGIGVEVAMQWNDSFSENIY 271 Query: 252 VFINGRTVQD 261 F N +D Sbjct: 272 CFTNNIPQRD 281 >gi|53988807|gb|AAV28318.1| DNA gyrase subunit B [Listeria welshimeri] Length = 217 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A + +E I + + DNG G+ Sbjct: 36 EIVDNAIDEALAGFCTEIEITIESD--NSITVRDNGRGIP 73 >gi|74008549|ref|XP_538131.2| PREDICTED: similar to MORC family CW-type zinc finger 4 (Zinc finger CW-type coiled-coil domain protein 2) [Canis familiaris] Length = 1021 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + KS TD+G GMT ++ + T Sbjct: 134 TRPFSAIAELLDNAVDPDVSARTVFIDVEEIKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 193 Query: 78 SK 79 K Sbjct: 194 DK 195 >gi|302024210|ref|ZP_07249421.1| DNA gyrase subunit B [Streptococcus suis 05HAS68] Length = 320 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + ++E I + + DNG G+ + Sbjct: 51 EIVDNSIDEALAGFADKIEVYIEPD--NSITVIDNGRGIPVD 90 >gi|292558800|gb|ADE31801.1| DNA gyrase, B subunit [Streptococcus suis GZ1] Length = 650 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + ++E I + + DNG G+ + Sbjct: 51 EIVDNSIDEALAGFADKIEVYIEPD--NSITVIDNGRGIPVD 90 >gi|223934277|ref|ZP_03626203.1| DNA gyrase, B subunit [Streptococcus suis 89/1591] gi|330833155|ref|YP_004401980.1| DNA gyrase subunit B [Streptococcus suis ST3] gi|223897052|gb|EEF63487.1| DNA gyrase, B subunit [Streptococcus suis 89/1591] gi|329307378|gb|AEB81794.1| DNA gyrase subunit B [Streptococcus suis ST3] Length = 650 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + ++E I + + DNG G+ + Sbjct: 51 EIVDNSIDEALAGFADKIEVYIEPD--NSITVIDNGRGIPVD 90 >gi|146319164|ref|YP_001198876.1| DNA gyrase subunit B [Streptococcus suis 05ZYH33] gi|253752208|ref|YP_003025349.1| DNA gyrase subunit B [Streptococcus suis SC84] gi|253754034|ref|YP_003027175.1| DNA gyrase subunit B [Streptococcus suis P1/7] gi|253755968|ref|YP_003029108.1| DNA gyrase subunit B [Streptococcus suis BM407] gi|145689970|gb|ABP90476.1| DNA gyrase [Streptococcus suis 05ZYH33] gi|226237519|dbj|BAH47268.1| DNA gyrase subunit B [Streptococcus suis] gi|251816497|emb|CAZ52133.1| DNA gyrase subunit B [Streptococcus suis SC84] gi|251818432|emb|CAZ56261.1| DNA gyrase subunit B [Streptococcus suis BM407] gi|251820280|emb|CAR46765.1| DNA gyrase subunit B [Streptococcus suis P1/7] gi|319758597|gb|ADV70539.1| DNA gyrase subunit B [Streptococcus suis JS14] Length = 650 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + ++E I + + DNG G+ + Sbjct: 51 EIVDNSIDEALAGFADKIEVYIEPD--NSITVIDNGRGIPVD 90 >gi|76818432|ref|YP_337358.1| sensor kinase protein [Burkholderia pseudomallei 1710b] gi|76582905|gb|ABA52379.1| sensor kinase protein [Burkholderia pseudomallei 1710b] Length = 1093 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Query: 30 LIENSL---DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A + RV+ I GG ++ DNG G+ + + +R Sbjct: 989 LVDNAIRYAGAGA-RVDVDARIDAGGTPVLEVRDNGPGIPAADRERVWERFY 1039 >gi|16802054|ref|NP_463539.1| DNA gyrase subunit B [Listeria monocytogenes EGD-e] gi|46906230|ref|YP_012619.1| DNA gyrase, B subunit [Listeria monocytogenes serotype 4b str. F2365] gi|47093016|ref|ZP_00230795.1| DNA gyrase, B subunit [Listeria monocytogenes str. 4b H7858] gi|47097288|ref|ZP_00234846.1| DNA gyrase, B subunit [Listeria monocytogenes str. 1/2a F6854] gi|224498301|ref|ZP_03666650.1| DNA gyrase, B subunit [Listeria monocytogenes Finland 1988] gi|224503071|ref|ZP_03671378.1| DNA gyrase, B subunit [Listeria monocytogenes FSL R2-561] gi|226222645|ref|YP_002756752.1| DNA gyrase subunit B [Listeria monocytogenes Clip81459] gi|254824774|ref|ZP_05229775.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-194] gi|254827430|ref|ZP_05232117.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|254830702|ref|ZP_05235357.1| DNA gyrase subunit B [Listeria monocytogenes 10403S] gi|254851836|ref|ZP_05241184.1| DNA gyrase subunit B [Listeria monocytogenes FSL R2-503] gi|254899680|ref|ZP_05259604.1| DNA gyrase subunit B [Listeria monocytogenes J0161] gi|254913117|ref|ZP_05263129.1| DNA gyrase subunit B [Listeria monocytogenes J2818] gi|254930863|ref|ZP_05264222.1| DNA gyrase subunit B [Listeria monocytogenes HPB2262] gi|254937498|ref|ZP_05269195.1| DNA gyrase subunit B [Listeria monocytogenes F6900] gi|254994017|ref|ZP_05276207.1| DNA gyrase subunit B [Listeria monocytogenes FSL J2-064] gi|255520064|ref|ZP_05387301.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-175] gi|284803260|ref|YP_003415125.1| DNA gyrase subunit B [Listeria monocytogenes 08-5578] gi|284996401|ref|YP_003418169.1| DNA gyrase subunit B [Listeria monocytogenes 08-5923] gi|300763380|ref|ZP_07073378.1| DNA gyrase, B subunit [Listeria monocytogenes FSL N1-017] gi|21328234|gb|AAM48481.1|AF084042_1 DNA gyrase subunit B [Listeria monocytogenes] gi|16409365|emb|CAC98221.1| DNA gyrase subunit B [Listeria monocytogenes EGD-e] gi|46879494|gb|AAT02796.1| DNA gyrase, B subunit [Listeria monocytogenes serotype 4b str. F2365] gi|47014333|gb|EAL05308.1| DNA gyrase, B subunit [Listeria monocytogenes str. 1/2a F6854] gi|47018584|gb|EAL09338.1| DNA gyrase, B subunit [Listeria monocytogenes str. 4b H7858] gi|225875107|emb|CAS03795.1| DNA gyrase subunit B [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258599808|gb|EEW13133.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165] gi|258605128|gb|EEW17736.1| DNA gyrase subunit B [Listeria monocytogenes FSL R2-503] gi|258610100|gb|EEW22708.1| DNA gyrase subunit B [Listeria monocytogenes F6900] gi|284058822|gb|ADB69763.1| DNA gyrase subunit B [Listeria monocytogenes 08-5578] gi|284061868|gb|ADB72807.1| DNA gyrase subunit B [Listeria monocytogenes 08-5923] gi|293582408|gb|EFF94440.1| DNA gyrase subunit B [Listeria monocytogenes HPB2262] gi|293591119|gb|EFF99453.1| DNA gyrase subunit B [Listeria monocytogenes J2818] gi|293594013|gb|EFG01774.1| DNA gyrase subunit B [Listeria monocytogenes FSL J1-194] gi|300515657|gb|EFK42706.1| DNA gyrase, B subunit [Listeria monocytogenes FSL N1-017] gi|328468327|gb|EGF39333.1| DNA gyrase subunit B [Listeria monocytogenes 1816] gi|332310339|gb|EGJ23434.1| DNA gyrase subunit B [Listeria monocytogenes str. Scott A] Length = 646 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A + +E I + + DNG G+ Sbjct: 52 EIVDNAIDEALAGFCTEIEITIEAD--NSITVRDNGRGIP 89 >gi|307719642|ref|YP_003875174.1| chaperone protein HtpG [Spirochaeta thermophila DSM 6192] gi|306533367|gb|ADN02901.1| chaperone protein HtpG [Spirochaeta thermophila DSM 6192] Length = 615 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 63/197 (31%), Gaps = 51/197 (25%) Query: 19 IIERPSI----AIKELIENSLDA-----------ES-------SRVETVIAGGGKSFFQI 56 II ++EL+ N+ DA E+ R++ G+S+ Q+ Sbjct: 17 IIHSLYSHREIFLRELVSNASDALDKLRFLVLTDEAYKGVPFTPRIDIRFDEEGRSYLQV 76 Query: 57 TDNGFGMTSEEI-------PMAVQRHCTSKISDDFSNIHTF------GFRGEALPSIGAV 103 D G GM +++ + S+++ D T GF S V Sbjct: 77 EDTGIGMNEQDLIENLGTIAKSGTSEFLSRLTGDAKKDATLIGQFGVGF-----YSAFMV 131 Query: 104 S-HLTLMSRPPQNNTGAQIAISGEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSE 161 + + +++R G+ + P GT V+ + F Sbjct: 132 ADRVEVLTRKAGEEKAFLWVSDGKGEYEILPAERAGHGTTVK----LYLNEQGKEFASRW 187 Query: 162 QVETNLITDVIRRMAIA 178 I +++RR + Sbjct: 188 -----RIEEIVRRYSNH 199 >gi|94957790|gb|ABF47145.1| DNA topoisomerase IV subunit B [Entomoplasma somnilux] Length = 551 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ + ++ G ++DNG G+ Sbjct: 13 EIVDNSIDEALAGYATEISVILEKNG--SVTVSDNGRGVP 50 >gi|170721092|ref|YP_001748780.1| integral membrane sensor signal transduction histidine kinase [Pseudomonas putida W619] gi|169759095|gb|ACA72411.1| integral membrane sensor signal transduction histidine kinase [Pseudomonas putida W619] Length = 428 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Query: 21 ERPSI---AIKELIENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 RP + L++N+L A ++ +E GG + ++ DNG G+ +E+ ++ Sbjct: 322 TRPHALRRVLVNLVDNALKFAGAAELEV-CREGGMTVIRVLDNGPGIPGDELDEVLKPFY 380 >gi|254251318|ref|ZP_04944636.1| Signal transduction histidine kinase [Burkholderia dolosa AUO158] gi|124893927|gb|EAY67807.1| Signal transduction histidine kinase [Burkholderia dolosa AUO158] Length = 667 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 20/91 (21%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + +E IA + ++ DNG G+ + +P + Sbjct: 547 RLEQVLINLLGNALDAVAGVAAPAIEVTIAVSAATLAVEVRDNGPGIAPDLLPRLFEPFF 606 Query: 77 TSKISDDFSNIHTFGFRGEAL-----PSIGA 102 T+K G RG L SI + Sbjct: 607 TTK---------EMG-RGLGLGLAISSSIAS 627 >gi|283457093|ref|YP_003361656.1| type IIA topoisomerase, B subunit [Rothia mucilaginosa DY-18] gi|283133071|dbj|BAI63836.1| type IIA topoisomerase, B subunit [Rothia mucilaginosa DY-18] Length = 713 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 6/47 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S+++ I G ++ D+G G+ +E P Sbjct: 83 VYEVVDNSVDEALAGYASKIDVTIQADGA--VRVEDDGRGIPVDEHP 127 >gi|255326477|ref|ZP_05367559.1| DNA gyrase, B subunit [Rothia mucilaginosa ATCC 25296] gi|255296517|gb|EET75852.1| DNA gyrase, B subunit [Rothia mucilaginosa ATCC 25296] Length = 678 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 6/47 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S+++ I G ++ D+G G+ +E P Sbjct: 48 VYEVVDNSVDEALAGYASKIDVTIQADGA--VRVEDDGRGIPVDEHP 92 >gi|239908552|ref|YP_002955294.1| sensor histidine kinase [Desulfovibrio magneticus RS-1] gi|239798419|dbj|BAH77408.1| sensor histidine kinase [Desulfovibrio magneticus RS-1] Length = 1124 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 15/78 (19%) Query: 19 IIERP----SIAIKELIENSLDA--------ESSRVETVI-AGGGKSFFQITDNGFGMTS 65 ++ P + + L+ N+ DA R+E + G++ + DNG G+ Sbjct: 1000 VVHGPRGEFAQVVLNLLGNAKDAILARKPVRG--RIEIRVMQRLGRAVVAVADNGGGIPP 1057 Query: 66 EEIPMAVQRHCTSKISDD 83 + + + T+K S D Sbjct: 1058 DILDRIFDPYYTTKGSQD 1075 >gi|229520187|ref|ZP_04409614.1| DNA gyrase subunit B [Vibrio cholerae TM 11079-80] gi|229342781|gb|EEO07772.1| DNA gyrase subunit B [Vibrio cholerae TM 11079-80] Length = 805 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + I + ++D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGYCKDIVVTIHED--NSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L++ Q G + + V Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKVLLTIYRGGKIHTQTYHHGVPQAPLAVVG 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T VR P+ F + + +++ +R ++ VS + + K Sbjct: 159 DTERTGTTVRF----WPSAQTFT-NIEFHYDILAKRLRELSFLNSGVSIKLTDEREEDKK 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 +F G ++ + + + +N G Y F N Sbjct: 214 DHFMYEGG-IQAFVTHLNRNKTPIHEKVFHFNQEREDGISVEVAMQWNDGFQENIYCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|300774354|ref|ZP_07084218.1| two component system sensor histidine kinase [Chryseobacterium gleum ATCC 35910] gi|300506998|gb|EFK38132.1| two component system sensor histidine kinase [Chryseobacterium gleum ATCC 35910] Length = 437 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 25 IAIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 IK L ENS+ +S V + + +++DNG G+ +E+ ++ Sbjct: 334 TVIKNLCENSVKYGASVVAINLKSNFQHLEIEVSDNGQGIEKKELNNIFEKFY 386 >gi|153212956|ref|ZP_01948550.1| DNA gyrase, subunit B [Vibrio cholerae 1587] gi|124116182|gb|EAY35002.1| DNA gyrase, subunit B [Vibrio cholerae 1587] Length = 805 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + I + ++D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGYCKDIVVTIHED--NSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L++ Q G + + V Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKVLLTIYRGGKIHTQTYHHGVPQAPLAVVG 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T VR P+ F + + +++ +R ++ VS + + K Sbjct: 159 DTERTGTTVRF----WPSAQTFT-NIEFHYDILAKRLRELSFLNSGVSIKLTDEREEDKK 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 +F G ++ + + + +N G Y F N Sbjct: 214 DHFMYEGG-IQAFVTHLNRNKTPIHEKVFHFNQEREDGISVEVAMQWNDGFQENIYCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|16799085|ref|NP_469353.1| DNA gyrase subunit B [Listeria innocua Clip11262] gi|16412427|emb|CAC95239.1| DNA gyrase subunit B [Listeria innocua Clip11262] Length = 646 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A + +E I + + DNG G+ Sbjct: 52 EIVDNAIDEALAGFCTEIEITIEAD--NSITVRDNGRGIP 89 >gi|254225547|ref|ZP_04919156.1| DNA gyrase, subunit B [Vibrio cholerae V51] gi|254291124|ref|ZP_04961921.1| DNA gyrase, subunit B [Vibrio cholerae AM-19226] gi|125621867|gb|EAZ50192.1| DNA gyrase, subunit B [Vibrio cholerae V51] gi|150422969|gb|EDN14919.1| DNA gyrase, subunit B [Vibrio cholerae AM-19226] Length = 805 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + I + ++D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGYCKDIVVTIHED--NSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L++ Q G + + V Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKVLLTIYRGGKIHTQTYHHGVPQAPLAVVG 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T VR P+ F + + +++ +R ++ VS + + K Sbjct: 159 DTERTGTTVRF----WPSAQTFT-NIEFHYDILAKRLRELSFLNSGVSIKLTDEREEDKK 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 +F G ++ + + + +N G Y F N Sbjct: 214 DHFMYEGG-IQAFVTHLNRNKTPIHEKVFHFNQEREDGISVEVAMQWNDGFQENIYCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|85708496|ref|ZP_01039562.1| two-component signal transduction histidine kinase [Erythrobacter sp. NAP1] gi|85690030|gb|EAQ30033.1| two-component signal transduction histidine kinase [Erythrobacter sp. NAP1] Length = 421 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 23 PSIAIKELIENSLDAES--SRVETVIAGG--GKSFFQITDNGFGMTSEEIPMAVQRHC 76 ++ L++N+L S + V + G + +TD G G+ E++P +R Sbjct: 283 LEQVVRNLVDNALKYGSADTSVTVRLDRSQDGMARIAVTDQGDGIAPEQLPHLTRRFY 340 >gi|255514226|gb|EET90488.1| Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 734 Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 48/141 (34%), Gaps = 29/141 (20%) Query: 29 ELIENSLDAESSRVETVIAG---GGKSFFQITDNGFGMTSEEIPMAVQRHCT-------- 77 ELI+N DA++ V+ + K+ + D+G GM+ E I T Sbjct: 31 ELIKNGYDADADEVKVSLENLKNPEKTVITVEDDGVGMSEETIRGPWLDIATGVKDKQKQ 90 Query: 78 SKISDDFSNIHTFGFRGEALPSIGAVSH---------LTLMSRPPQNNTGAQIAISGEKI 128 SK + G +G V L ++++P ++T I+ + Sbjct: 91 SKKRTKKERLP-LGEKG--------VGRFAAQRLGRILEMITKPEGSDTEFYTKINWDDW 141 Query: 129 SSVRPVAMNPGTIVEVRDLFF 149 + +E R + Sbjct: 142 DKEDVFVDDINIDIESRKPEY 162 >gi|319404966|emb|CBI78568.1| two-component sensor kinase BatS [Bartonella sp. AR 15-3] Length = 558 Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 13/68 (19%) Query: 22 RPSIAIKELIENSLDAES------SRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQR 74 R + LIEN A S ++ + + + DNG G+ SE I +R Sbjct: 442 RLGQVVSNLIEN---ARSFVPRKNGKICITMKNNTSTLILTVEDNGPGIRSENIERIFER 498 Query: 75 HCT---SK 79 T SK Sbjct: 499 FYTDRSSK 506 >gi|322421547|ref|YP_004200770.1| heavy metal sensor signal transduction histidine kinase [Geobacter sp. M18] gi|320127934|gb|ADW15494.1| heavy metal sensor signal transduction histidine kinase [Geobacter sp. M18] Length = 495 Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 9/70 (12%) Query: 17 GEIIERPS---IAIKELIENSLDAES--SRVETVI---AGGGKSFFQITDNGFGMTSEEI 68 GE+ P+ A+ LI N+L S ++ + GG + D+G GM EE+ Sbjct: 351 GEVSVDPNLFQRAVGNLISNALHYSSPFKQIRVKLRPADNGGLE-IAVEDDGMGMAPEEL 409 Query: 69 PMAVQRHCTS 78 P R S Sbjct: 410 PRVFDRFYRS 419 >gi|225431677|ref|XP_002263942.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 736 Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%) Query: 26 AIKELIENSLDAESSRVETVIA-----GGGKS--FFQITDNGFGMTSEEIPMAVQRHCTS 78 AI EL++NS DA+++++ I G+ + D+G GMT +EI V Sbjct: 235 AIAELVDNSRDAKATKLGISIEMIYSKKAGEDIPMLSVKDDGQGMTHKEIVRMVSFGHKQ 294 Query: 79 KISDDFSNIHTFG 91 +DD +I FG Sbjct: 295 PDTDDPDHIGRFG 307 >gi|188474273|gb|ACD49736.1| DNA gyrase subunit B [Vibrio mimicus] Length = 778 Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + I + ++D+G G+ EE A + H Sbjct: 26 EVVDNSIDEALAGYCKDIVVTIHED--NSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLH 83 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L++ Q G + + V Sbjct: 84 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKVLLTIYRGGKIHTQTYHHGVPQAPLSVVG 142 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T VR P+ F + + +++ +R ++ VS + + K Sbjct: 143 ETERTGTTVRF----WPSAQTFT-NIEFHYDILAKRLRELSFLNSGVSIRLTDEREEDKK 197 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 +F G ++ + + + +N G Y F N Sbjct: 198 DHFMYEGG-IQAFVTHLNRNKTPIHEKVFHFNQEREDGISVEVAMQWNDGFQENIYCFTN 256 Query: 256 GRTVQD 261 +D Sbjct: 257 NIPQRD 262 >gi|296088514|emb|CBI37505.3| unnamed protein product [Vitis vinifera] Length = 596 Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 7/73 (9%) Query: 26 AIKELIENSLDAESSRVETVIA-----GGGKS--FFQITDNGFGMTSEEIPMAVQRHCTS 78 AI EL++NS DA+++++ I G+ + D+G GMT +EI V Sbjct: 116 AIAELVDNSRDAKATKLGISIEMIYSKKAGEDIPMLSVKDDGQGMTHKEIVRMVSFGHKQ 175 Query: 79 KISDDFSNIHTFG 91 +DD +I FG Sbjct: 176 PDTDDPDHIGRFG 188 >gi|110164971|gb|ABG49484.1| MLH1-Ex6 isoform [Homo sapiens] Length = 56 Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 97 LPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS-SVRPVAMNPGTIVEV 144 L SI V+H+T+ ++ + + S K+ +P A N GT + V Sbjct: 1 LASISHVAHVTITTKTADGKCAYRASYSDGKLKAPPKPCAGNQGTQITV 49 >gi|148654235|ref|YP_001274440.1| DNA gyrase subunit B [Roseiflexus sp. RS-1] gi|148566345|gb|ABQ88490.1| DNA gyrase subunit B [Roseiflexus sp. RS-1] Length = 645 Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats. Identities = 30/252 (11%), Positives = 78/252 (30%), Gaps = 27/252 (10%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAV--- 72 + ++E+++NS+D A ++ VE I G + D+G+G+ + P Sbjct: 41 VNGLHTMVREVVDNSVDEVMAGRATTVEVTIHRDG--SVTVADDGYGIPTGPHPKLGVST 98 Query: 73 ------QRHCTSKISDDFSNIHTFGFRGEALPSIGAVS---HLTLMSRPPQNNTGAQIAI 123 H K + + + G G + ++ A+S + + + + + Sbjct: 99 LQVVMTVLHAGGKFDNKSYKVSS-GLHGVGVSAVNALSAYMRVDVHNARDGMHYFQEYRC 157 Query: 124 SGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 + + + +++ + R MA + Sbjct: 158 GVPQCEVQKVGPTTRRGTIT------RFLPDTTIIQTLDYNFKTLAQRFREMAYLNKGLR 211 Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFN 243 F F + + ++NF G + + + + + + + + Sbjct: 212 FKF-VDERDGNEVNFYFEGG-IRSYVRHLNKDRNVLHKQPFYVERIVDDVMVEVALQYTE 269 Query: 244 RGNANQFYVFIN 255 + + Y F N Sbjct: 270 SFDTDSVYAFAN 281 >gi|326625882|gb|EGE32227.1| sensor protein ZraS [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 534 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 8/65 (12%) Query: 21 ERPSIAIKELIENSLDA----ESSRVETVIAGGGKSF--FQITDNGFGMTSEEIPMAVQR 74 +R + + L N++ A + G +TDNG G+ +++ Sbjct: 426 DRLTQVLLNLYLNAIHAIGRQG--TISVEAKESGTDRVIITVTDNGKGIAPDQLEAIFTP 483 Query: 75 HCTSK 79 + T+K Sbjct: 484 YFTTK 488 >gi|301786220|ref|XP_002928526.1| PREDICTED: MORC family CW-type zinc finger protein 1-like [Ailuropoda melanoleuca] Length = 1067 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVET-VIAG----GGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA ++R++ + GG + D+G GM+ EE + + K S Sbjct: 140 ELLDNARDAGAARLDVFSVDNEKLQGGFMLCFL-DDGCGMSPEEASDIIYFGTSKKRSST 198 Query: 84 FSNIHTFG 91 I +G Sbjct: 199 LKFIGQYG 206 >gi|255013561|ref|ZP_05285687.1| hypothetical protein B2_06615 [Bacteroides sp. 2_1_7] Length = 177 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 33 NSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 NS+ A++S +E I +I DNG GM E + + T Sbjct: 14 NSIRAKASDIEIDIQIKDTSICIRIADNGCGMDPETVSLIRNPFYT 59 >gi|197124334|ref|YP_002136285.1| histidine kinase [Anaeromyxobacter sp. K] gi|196174183|gb|ACG75156.1| histidine kinase [Anaeromyxobacter sp. K] Length = 679 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 31/144 (21%), Positives = 49/144 (34%), Gaps = 30/144 (20%) Query: 18 EIIERPSIAIKELIENSLDAESSRVETVIAG----GGKSFFQITDNGFGMTSEEIPMAVQ 73 E++ AI EL++N+ DA+++ V GG I+D+G GM + Sbjct: 29 EVV-----AITELVKNAHDADAATVTISFRSVSTPGG--EITISDDGCGMDLDTFLSGWM 81 Query: 74 RHCTS-KISDDFSNIHTFGFR--GEALPSIGAVSH---------LTLMSRPPQNNTGAQI 121 S K S + G R GE V L L+SR + Sbjct: 82 EPAGSTKASSASKQTRS-GRRVLGE-----KGVGRFAADKLGRYLELVSRRKGQPE-VRA 134 Query: 122 AISGEKISSVRPVAMNPGTIVEVR 145 ++ + + EVR Sbjct: 135 EFDWDQFDDDGEMLSSIKNRWEVR 158 >gi|149720421|ref|XP_001494692.1| PREDICTED: similar to MORC family CW-type zinc finger protein 2 (Zinc finger CW-type coiled-coil domain protein 1) [Equus caballus] Length = 1015 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ GG + D+G GM + +Q ++K + + Sbjct: 17 ELVDNARDADATRIDIYAERREDLRGGFMLCFL-DDGAGMDPSDAASVIQFGKSAKRTPE 75 Query: 84 FSNIHTFG 91 + I +G Sbjct: 76 STQIGQYG 83 >gi|156101489|ref|XP_001616438.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148805312|gb|EDL46711.1| hypothetical protein, conserved [Plasmodium vivax] Length = 542 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 10/63 (15%) Query: 27 IKELIENSLDA------ESSRVETVIAGGGKSF----FQITDNGFGMTSEEIPMAVQRHC 76 +KEL +NS+DA + V+ +I K DNG G +++ + Sbjct: 34 VKELFDNSIDALSSVKGKGKEVQILIREYKKELSLYEIVCRDNGEGAEIKDLEKFSEIFL 93 Query: 77 TSK 79 TSK Sbjct: 94 TSK 96 >gi|116871428|ref|YP_848209.1| DNA gyrase subunit B [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740306|emb|CAK19424.1| DNA gyrase subunit B [Listeria welshimeri serovar 6b str. SLCC5334] Length = 646 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A + +E I + + DNG G+ Sbjct: 52 EIVDNAIDEALAGFCTEIEITIEAD--NSITVRDNGRGIP 89 >gi|285026530|ref|NP_001165561.1| MORC family CW-type zinc finger protein 1 [Rattus norvegicus] gi|109493239|ref|XP_340984.3| PREDICTED: MORC family CW-type zinc finger 1 [Rattus norvegicus] gi|109494309|ref|XP_001064970.1| PREDICTED: MORC family CW-type zinc finger 1 [Rattus norvegicus] Length = 957 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 10/70 (14%) Query: 29 ELIENSLDAESSRVET-VIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCTSKISDDF 84 EL++N+ DA + R++ + G D+G GM+ +E + TSK Sbjct: 33 ELLDNARDAGAVRLDVFSVDNGTLQGGFMLCFLDDGCGMSPDEASDIIY-FGTSK----- 86 Query: 85 SNIHTFGFRG 94 + T F G Sbjct: 87 KRLSTLKFIG 96 >gi|148265645|ref|YP_001232351.1| integral membrane sensor signal transduction histidine kinase [Geobacter uraniireducens Rf4] gi|146399145|gb|ABQ27778.1| integral membrane sensor signal transduction histidine kinase [Geobacter uraniireducens Rf4] Length = 492 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 3/60 (5%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGG---GKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 + LI N+LDA + G F +TD G G+ E+ + T+K Sbjct: 383 LHQVVLNLILNALDASPQQGTIEFLAYCHDGFYFLVVTDQGSGIPPEDREKIFEIFHTTK 442 >gi|326389794|ref|ZP_08211358.1| integral membrane sensor signal transduction histidine kinase [Thermoanaerobacter ethanolicus JW 200] gi|325994062|gb|EGD52490.1| integral membrane sensor signal transduction histidine kinase [Thermoanaerobacter ethanolicus JW 200] Length = 457 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 11/59 (18%) Query: 27 IKELI----ENSLDAESS----RVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 IKELI +N+ A+ + +E + K++ +I D+G G+ E+IP R Sbjct: 351 IKELIRIFLDNA--AKYTSSDGNIEIDVGKDNSKAYIKIKDDGIGIPQEDIPHIFDRFY 407 >gi|28198449|ref|NP_778763.1| DNA topoisomerase IV subunit B [Xylella fastidiosa Temecula1] gi|182681122|ref|YP_001829282.1| DNA topoisomerase IV subunit B [Xylella fastidiosa M23] gi|28056533|gb|AAO28412.1| topoisomerase IV subunit B [Xylella fastidiosa Temecula1] gi|182631232|gb|ACB92008.1| DNA topoisomerase IV, B subunit [Xylella fastidiosa M23] Length = 629 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 15/75 (20%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A ++R+E + G ++ DNG GM EE + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGYANRIEVTLYKDG--SCEVADNGRGMPVDIHPEEKIPGV 87 Query: 69 PMAVQR-HCTSKISD 82 + + R H K S+ Sbjct: 88 ELILTRLHAGGKFSN 102 >gi|15837887|ref|NP_298575.1| DNA topoisomerase IV subunit B [Xylella fastidiosa 9a5c] gi|9106275|gb|AAF84095.1|AE003962_5 topoisomerase IV subunit B [Xylella fastidiosa 9a5c] Length = 629 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 15/75 (20%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A ++R+E + G ++ DNG GM EE + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGYANRIEVTLYKDG--SCEVADNGRGMPVDIHPEEKIPGV 87 Query: 69 PMAVQR-HCTSKISD 82 + + R H K S+ Sbjct: 88 ELILTRLHAGGKFSN 102 >gi|71898809|ref|ZP_00680977.1| DNA topoisomerase (ATP-hydrolyzing) [Xylella fastidiosa Ann-1] gi|71731395|gb|EAO33458.1| DNA topoisomerase (ATP-hydrolyzing) [Xylella fastidiosa Ann-1] Length = 458 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 15/75 (20%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A ++R+E + G ++ DNG GM EE + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGYANRIEVTLYKDG--SCEVADNGRGMPVDIHPEEKIPGV 87 Query: 69 PMAVQR-HCTSKISD 82 + + R H K S+ Sbjct: 88 ELILTRLHAGGKFSN 102 >gi|71902107|ref|ZP_00684141.1| Gram negative topoisomerase IV, subunit B [Xylella fastidiosa Ann-1] gi|71728125|gb|EAO30322.1| Gram negative topoisomerase IV, subunit B [Xylella fastidiosa Ann-1] Length = 629 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 15/75 (20%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A ++R+E + G ++ DNG GM EE + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGYANRIEVTLYKDG--SCEVADNGRGMPVDIHPEEKIPGV 87 Query: 69 PMAVQR-HCTSKISD 82 + + R H K S+ Sbjct: 88 ELILTRLHAGGKFSN 102 >gi|71274921|ref|ZP_00651209.1| Gram negative topoisomerase IV, subunit B [Xylella fastidiosa Dixon] gi|170729813|ref|YP_001775246.1| DNA topoisomerase IV subunit B [Xylella fastidiosa M12] gi|71164653|gb|EAO14367.1| Gram negative topoisomerase IV, subunit B [Xylella fastidiosa Dixon] gi|167964606|gb|ACA11616.1| DNA topoisomerase (ATP-hydrolyzing) [Xylella fastidiosa M12] Length = 629 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 15/75 (20%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A ++R+E + G ++ DNG GM EE + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGYANRIEVTLYKDG--SCEVADNGRGMPVDIHPEEKIPGV 87 Query: 69 PMAVQR-HCTSKISD 82 + + R H K S+ Sbjct: 88 ELILTRLHAGGKFSN 102 >gi|118431160|ref|NP_147433.2| DNA topoisomerase VI subunit B [Aeropyrum pernix K1] gi|150421695|sp|Q9YE64|TOP6B_AERPE RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|116062484|dbj|BAA79682.2| type II DNA topoisomerase VI subunit B [Aeropyrum pernix K1] Length = 568 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 14/60 (23%) Query: 27 IKELIENSLDA-ESS----RVETVIAG-------GGKSF--FQITDNGFGMTSEEIPMAV 72 I+EL+ENSLDA ++ + I GG+ + DNG G+ + MA Sbjct: 57 IRELVENSLDATDAKGILPWIHISIRQIEGSEGRGGRPRYTVTVEDNGIGVPVTSMAMAF 116 >gi|6116692|dbj|BAA85765.1| DNA gyrase subunit B [Pseudomonas aeruginosa] Length = 807 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 74/247 (29%), Gaps = 24/247 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A S + I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGYCSEISITIHTD--ESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+SH L L R G + + R Sbjct: 102 AGGKFDDNTYKV-SGGLHGVGVSVVNALSHELRLTIRRHNKVWEQVYHHGGSAVPTARSG 160 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 G+ EV + +++ IR ++ V ++ + Sbjct: 161 RRTDGSGTEVH-----FKPSPETFSNIHFSWDILAKRIRELSFLNSGVGILLRDERTGKE 215 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 ++ G + + N V E G +N F Sbjct: 216 ELFKY--EGGLKAFVEYLNTNKTAVNEVFHFNVQREEDGVGVEVALQWNDSFNENLLCFT 273 Query: 255 NGRTVQD 261 N +D Sbjct: 274 NNIPQRD 280 >gi|83953708|ref|ZP_00962429.1| C4-dicarboxylate transport sensor protein DctB, putative [Sulfitobacter sp. NAS-14.1] gi|83841653|gb|EAP80822.1| C4-dicarboxylate transport sensor protein DctB, putative [Sulfitobacter sp. NAS-14.1] Length = 586 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 17/91 (18%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N+LDA ++ VE +++ G + + DNG G+ E++ + Sbjct: 474 RIEQVLVNLLRNALDA--TKSERNPTVEIILSAGETATLTVRDNGPGI--EDLDSLFEPF 529 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHL 106 T+K D + G A+ S G VS L Sbjct: 530 YTTKQPGDGVGL------GLAISS-GIVSDL 553 >gi|323138796|ref|ZP_08073860.1| Heat shock protein Hsp90-like [Methylocystis sp. ATCC 49242] gi|322395944|gb|EFX98481.1| Heat shock protein Hsp90-like [Methylocystis sp. ATCC 49242] Length = 639 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 29/124 (23%) Query: 27 IKELIENSLDA------------------ESSRVETVIAGGGKSFFQITDNGFGMTSEEI 68 ++ELI N+ DA + V + K + DNG GM+ +E+ Sbjct: 48 LRELISNAADACEKLRYESLSNEKLAAMAGAPLVTISLDK-EKRTITVADNGVGMSRDEL 106 Query: 69 PMAVQRHCTS-------KI-SDDFSNIHTF-GFRGEALPSIGAVSH-LTLMSRPPQNNTG 118 A+ S KI + + G G S+ V+ + + +R + Sbjct: 107 ISALGAIANSGTRAFLEKIGKEGRDAGSSLIGRFGVGFYSVFMVADNVEVATRRAGEDKA 166 Query: 119 AQIA 122 Sbjct: 167 WLWT 170 >gi|229528394|ref|ZP_04417785.1| hypothetical protein VCG_001479 [Vibrio cholerae 12129(1)] gi|229334756|gb|EEO00242.1| hypothetical protein VCG_001479 [Vibrio cholerae 12129(1)] Length = 672 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 6/74 (8%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGG---GKSFFQITDNGFGMTSEEIPMAVQRHCTS- 78 I ELI N DA + V I G + D+G G+ R S Sbjct: 29 LQSVI-ELIANGFDANAQTVHVDIEYSEMDGLVSVSVCDDGTGIDIGSCDEHFSRFYESS 87 Query: 79 -KISDDFSNIHTFG 91 K DD H G Sbjct: 88 KKDDDDLQGAHGRG 101 >gi|147712759|gb|ABQ45883.1| mutL homolog 1 protein [Homo sapiens] Length = 40 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 19/35 (54%) Query: 94 GEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKI 128 GEAL SI V+H+T+ ++ + + S K+ Sbjct: 1 GEALASISHVAHVTIPTKTADGKCAYRASYSDGKL 35 >gi|322389902|ref|ZP_08063442.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus parasanguinis ATCC 903] gi|321143338|gb|EFX38776.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus parasanguinis ATCC 903] Length = 649 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E I + + D+G G+ + Sbjct: 50 EIVDNSIDEALAGFASHIEVFIEAD--NSITVVDDGRGIPVD 89 >gi|319946623|ref|ZP_08020857.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus australis ATCC 700641] gi|319746671|gb|EFV98930.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus australis ATCC 700641] Length = 649 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E I + + D+G G+ + Sbjct: 50 EIVDNSIDEALAGFASHIEVFIEAD--NSITVVDDGRGIPVD 89 >gi|312867405|ref|ZP_07727614.1| DNA gyrase, B subunit [Streptococcus parasanguinis F0405] gi|311097106|gb|EFQ55341.1| DNA gyrase, B subunit [Streptococcus parasanguinis F0405] Length = 649 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E I + + D+G G+ + Sbjct: 50 EIVDNSIDEALAGFASHIEVFIEAD--NSITVVDDGRGIPVD 89 >gi|296876169|ref|ZP_06900223.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus parasanguinis ATCC 15912] gi|296432880|gb|EFH18673.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus parasanguinis ATCC 15912] Length = 649 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E I + + D+G G+ + Sbjct: 50 EIVDNSIDEALAGFASHIEVFIEAD--NSITVVDDGRGIPVD 89 >gi|190710577|gb|ACE95119.1| gyrase subunit B [Bacillus thuringiensis serovar kenyae] Length = 627 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|190710559|gb|ACE95110.1| gyrase subunit B [Bacillus thuringiensis serovar nigeriensis] Length = 627 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|190710557|gb|ACE95109.1| gyrase subunit B [Bacillus thuringiensis serovar londrina] gi|190710571|gb|ACE95116.1| gyrase subunit B [Bacillus thuringiensis serovar kurstaki] gi|190710573|gb|ACE95117.1| gyrase subunit B [Bacillus thuringiensis serovar kurstaki] gi|190710579|gb|ACE95120.1| gyrase subunit B [Bacillus thuringiensis serovar canadensis] gi|190710583|gb|ACE95122.1| gyrase subunit B [Bacillus thuringiensis serovar jegathesan] gi|190710585|gb|ACE95123.1| gyrase subunit B [Bacillus thuringiensis serovar yosoo] gi|190710593|gb|ACE95127.1| gyrase subunit B [Bacillus thuringiensis serovar kurstaki] gi|190710599|gb|ACE95130.1| gyrase subunit B [Bacillus thuringiensis serovar yunnanensis] gi|190710603|gb|ACE95132.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae] gi|190710607|gb|ACE95134.1| gyrase subunit B [Bacillus thuringiensis serovar kumamotoensis] gi|190710613|gb|ACE95137.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae] Length = 627 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|190710549|gb|ACE95105.1| gyrase subunit B [Bacillus thuringiensis serovar kenyae] Length = 627 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|145577985|gb|ABP82711.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar thompsoni] Length = 632 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|145577965|gb|ABP82701.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus mycoides] Length = 632 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|145577967|gb|ABP82702.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus cereus] Length = 632 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|145577975|gb|ABP82706.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar entomocidus] Length = 632 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|145577977|gb|ABP82707.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar higo] gi|145577979|gb|ABP82708.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar kenyae] gi|145578009|gb|ABP82723.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar azorensis] gi|145578021|gb|ABP82729.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar zhaodongensis] Length = 632 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|92112140|ref|YP_572068.1| DNA gyrase subunit B [Chromohalobacter salexigens DSM 3043] gi|91795230|gb|ABE57369.1| DNA gyrase subunit B [Chromohalobacter salexigens DSM 3043] Length = 805 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 EL++NS+D A S + VI ++DNG G+ ++ Sbjct: 43 ELVDNSIDEALAGHCSEIRVVIHPD--ESITVSDNGRGIPTD 82 >gi|19909601|dbj|BAB86996.1| DNA gyrase subunit B [Halomonas pacifica] Length = 378 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 EL++NS+D A S + VI ++DNG G+ ++ Sbjct: 12 ELVDNSIDEALAGHCSEIRVVIHPD--ESITVSDNGRGIPTD 51 >gi|190710605|gb|ACE95133.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae] Length = 627 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|190710595|gb|ACE95128.1| gyrase subunit B [Bacillus thuringiensis serovar pondicheriensis] Length = 627 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|190710575|gb|ACE95118.1| gyrase subunit B [Bacillus thuringiensis serovar kenyae] Length = 627 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|145578005|gb|ABP82721.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar bolivia] Length = 632 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|145577997|gb|ABP82717.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar pulsiensis] Length = 632 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|145577995|gb|ABP82716.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar oswaldocruzi] Length = 631 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|68166168|gb|AAY88017.1| DNA gyrase subunit B [Listeria seeligeri] gi|68166170|gb|AAY88018.1| DNA gyrase subunit B [Listeria seeligeri] gi|68166172|gb|AAY88019.1| DNA gyrase subunit B [Listeria seeligeri] gi|68166174|gb|AAY88020.1| DNA gyrase subunit B [Listeria seeligeri] gi|68166176|gb|AAY88021.1| DNA gyrase subunit B [Listeria seeligeri] gi|68166178|gb|AAY88022.1| DNA gyrase subunit B [Listeria seeligeri] gi|73698012|gb|AAZ81551.1| DNA gyrase subunit B [Listeria seeligeri] gi|73698014|gb|AAZ81552.1| DNA gyrase subunit B [Listeria seeligeri] Length = 217 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A + +E I + + DNG G+ Sbjct: 36 EIVDNAIDEALAGFCTEIEITIEAD--NSITVRDNGRGIP 73 >gi|75812586|ref|YP_320205.1| hypothetical protein Ava_B0306 [Anabaena variabilis ATCC 29413] gi|75705342|gb|ABA25016.1| hypothetical protein Ava_B0306 [Anabaena variabilis ATCC 29413] Length = 608 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 34/131 (25%) Query: 26 AIKELIENSLDAESSRV-------ETVIAGGGKSFF---QITDNGFGMTSEEIPMAVQRH 75 AI EL++NS+ A ++ V + ++ S + DNG GM + + +A+Q Sbjct: 29 AIAELMDNSIQAGATEVQLLCGEKQVLVDQRRSSRIYKLAVLDNGCGMDATVLRLALQ-- 86 Query: 76 CTSKISDDFSNIHTF---------GFRGEALPSIGAVS---HLTLMSRPPQNNTGAQIAI 123 T+ G G LPS +VS + + S + Sbjct: 87 ---------FGNGTYLDAAKHIGIGRFGMGLPS-SSVSQCQKVEVWSWQDGIENAIYTYL 136 Query: 124 SGEKISSVRPV 134 E+I R Sbjct: 137 DLEEIKQQRQT 147 >gi|145577961|gb|ABP82699.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar finitimus] gi|145578027|gb|ABP82732.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar poloniensis] Length = 632 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|94500377|ref|ZP_01306909.1| DNA topoisomerase IV, B subunit [Oceanobacter sp. RED65] gi|94427412|gb|EAT12390.1| DNA topoisomerase IV, B subunit [Oceanobacter sp. RED65] Length = 631 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 71/216 (32%), Gaps = 24/216 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EI 68 RP+ +E+I+NS+D A + + + +TDNG GM ++ + Sbjct: 29 TRPNHLAQEVIDNSVDEALAGHCNHITIELFAD--QSLAVTDNGRGMPTDIHPEHGVSGV 86 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVSH---LTLMSRPPQNNTGAQIAIS 124 + + + H K S+D + G G + + A+S +T+ Q Sbjct: 87 ELILTKLHAGGKFSNDNYQ-FSGGLHGVGVSVVNALSKALEVTIHRNGEIMRIAFQDGEK 145 Query: 125 GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF 184 + + T VR + S + + V+R A+ P ++ Sbjct: 146 AIDLEKIGETKRKKDTGTTVR-----FLPDAKYFDSHKFSVPRLKHVLRAKAVLCPGLTI 200 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 F + + +G G + + Sbjct: 201 EFINHGNKDDNEKWFYEDGLIDYLTESTKGYETLPQ 236 >gi|237807171|ref|YP_002891611.1| DNA topoisomerase IV subunit B [Tolumonas auensis DSM 9187] gi|237499432|gb|ACQ92025.1| DNA topoisomerase IV, B subunit [Tolumonas auensis DSM 9187] Length = 630 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 67/207 (32%), Gaps = 23/207 (11%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + R++ ++ ++TD+G GM EE + Sbjct: 31 RPNHLGQEVIDNSVDEALAGHARRIDVILHDD--QSLEVTDDGRGMPVDIHPEEGVPAVE 88 Query: 70 MA-VQRHCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEK 127 + + H K S+ + G G + + A+S + + R N + Sbjct: 89 LIMCKLHAGGKFSNSNYQ-FSGGLHGVGISVVNALSRRVEVTVRRDGNVYEMAFEQGDKV 147 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK--VSFT 185 + + S + + + +++ A+ P + F Sbjct: 148 ADLTITGTCGKRNTGTRVKFW----PDAKYFDSPKFSASRLVHILKAKAVLCPGLTIHFE 203 Query: 186 FSTIKSNRYKMNFQSTNGNFPERISQV 212 + + + V Sbjct: 204 DRVNQQVYDWCYQDGLRDYLLDNLKDV 230 >gi|190710587|gb|ACE95124.1| gyrase subunit B [Bacillus thuringiensis serovar galleriae] Length = 627 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|226529982|ref|NP_001152760.1| MORC family CW-type zinc finger protein 2A isoform 1 [Mus musculus] gi|114150037|sp|Q69ZX6|MOR2A_MOUSE RecName: Full=MORC family CW-type zinc finger protein 2A; AltName: Full=Zinc finger CW-type coiled-coil domain protein 1 gi|56206467|emb|CAI25064.1| microrchidia 2A [Mus musculus] Length = 1030 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ GG + D+G GM + +Q ++K + + Sbjct: 35 ELVDNARDADATRIDIYAERREDLRGGFMLCFL-DDGAGMDPSDAASVIQFGKSAKRTPE 93 Query: 84 FSNIHTFG 91 + I +G Sbjct: 94 STQIGQYG 101 >gi|50510669|dbj|BAD32320.1| mKIAA0852 protein [Mus musculus] Length = 1035 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ GG + D+G GM + +Q ++K + + Sbjct: 40 ELVDNARDADATRIDIYAERREDLRGGFMLCFL-DDGAGMDPSDAASVIQFGKSAKRTPE 98 Query: 84 FSNIHTFG 91 + I +G Sbjct: 99 STQIGQYG 106 >gi|23978276|dbj|BAC21123.1| DNA gyrase B subunit [Pleurocapsa sp. PCC 7327] Length = 391 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TDNG G+ ++ Sbjct: 10 VYEVVDNSIDEALAGYCTHIEVDINSDG--SVTVTDNGRGIPTD 51 >gi|313635495|gb|EFS01732.1| DNA gyrase, B subunit [Listeria seeligeri FSL N1-067] Length = 528 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A + +E I + + DNG G+ Sbjct: 52 EIVDNAIDEALAGFCTEIEITIEAD--NSITVRDNGRGIP 89 >gi|300312655|ref|YP_003776747.1| C4-dicarboxylate transport sensor kinase transcription regulator protein [Herbaspirillum seropedicae SmR1] gi|300075440|gb|ADJ64839.1| C4-dicarboxylate transport sensor kinase transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 600 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 11/76 (14%) Query: 14 IAA-----GEIIERPSIAIKELIENSLDA--ES--SRVETVIA-GGGKSFFQITDNGFGM 63 I A G+++ R + L+ N+LDA E+ R+ V+ GG + +I D+G G+ Sbjct: 479 IRAAACVTGDVV-RTEQVLVNLLRNALDAVEEAEHKRIAVVLEVAGGYALVRIRDSGGGI 537 Query: 64 TSEEIPMAVQRHCTSK 79 E P + T+K Sbjct: 538 ADEVAPHLFEPFFTTK 553 >gi|297528381|ref|YP_003669656.1| DNA gyrase subunit beta [Geobacillus sp. C56-T3] gi|319765163|ref|YP_004130664.1| DNA gyrase B subunit [Geobacillus sp. Y412MC52] gi|297251633|gb|ADI25079.1| DNA gyrase, B subunit [Geobacillus sp. C56-T3] gi|317110029|gb|ADU92521.1| DNA gyrase, B subunit [Geobacillus sp. Y412MC52] Length = 638 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 8/43 (18%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKS-FFQITDNGFGMTSE 66 E+++NS+D A + ++ I GK + DNG G+ + Sbjct: 45 EIVDNSIDEALAGYCTNIDVTI---GKDNSITVADNGRGIPVD 84 >gi|291333528|gb|ADD93225.1| DNA topoisomerase VI B subunit [uncultured archaeon MedDCM-OCT-S08-C37] Length = 705 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 9/60 (15%) Query: 22 RPSIAIKELIENSLDA--ESS---RVETVIA--GGGKSFFQ--ITDNGFGMTSEEIPMAV 72 A+KE ++N+LDA E+ + I K + + DNG G+ + I Sbjct: 36 SLITAVKEAVDNALDACEEARILPEINVEIKKLDLKKDIIELKVEDNGPGIPQKSIEKVF 95 >gi|255003782|ref|NP_808387.2| MORC family CW-type zinc finger protein 2B [Mus musculus] gi|220941884|emb|CAX16071.1| microrchidia 2B [Mus musculus] Length = 1022 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 ELI+N+ DA+++R++ GG + DNG GM ++ +Q ++K + + Sbjct: 35 ELIDNARDADATRIDIYAEKREDLQGGFMLCFL-DNGVGMDPNDVINVIQFGKSAKRTPE 93 Query: 84 FSNIHTFG 91 + I +G Sbjct: 94 STQIGRYG 101 >gi|261417505|ref|YP_003251187.1| DNA gyrase subunit B [Geobacillus sp. Y412MC61] gi|261373962|gb|ACX76705.1| DNA gyrase, B subunit [Geobacillus sp. Y412MC61] Length = 640 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 8/43 (18%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKS-FFQITDNGFGMTSE 66 E+++NS+D A + ++ I GK + DNG G+ + Sbjct: 47 EIVDNSIDEALAGYCTNIDVTI---GKDNSITVADNGRGIPVD 86 >gi|111305037|gb|AAI20898.1| Morc2b protein [Mus musculus] gi|111309308|gb|AAI20897.1| Morc2b protein [Mus musculus] gi|148708323|gb|EDL40270.1| microrchidia 2B [Mus musculus] Length = 1022 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 ELI+N+ DA+++R++ GG + DNG GM ++ +Q ++K + + Sbjct: 35 ELIDNARDADATRIDIYAEKREDLQGGFMLCFL-DNGVGMDPNDVINVIQFGKSAKRTPE 93 Query: 84 FSNIHTFG 91 + I +G Sbjct: 94 STQIGRYG 101 >gi|27502104|gb|AAO17388.1| TCE6 [Mus musculus] Length = 998 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 ELI+N+ DA+++R++ GG + DNG GM ++ +Q ++K + + Sbjct: 35 ELIDNARDADATRIDIYAEKREDLQGGFMLCFL-DNGVGMDPNDVINVIQFGKSAKRTPE 93 Query: 84 FSNIHTFG 91 + I +G Sbjct: 94 STQIGRYG 101 >gi|56418540|ref|YP_145858.1| DNA gyrase subunit B [Geobacillus kaustophilus HTA426] gi|56378382|dbj|BAD74290.1| DNA gyrase subunit B [Geobacillus kaustophilus HTA426] Length = 638 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 8/43 (18%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKS-FFQITDNGFGMTSE 66 E+++NS+D A + ++ I GK + DNG G+ + Sbjct: 45 EIVDNSIDEALAGYCTNIDVTI---GKDNSITVADNGRGIPVD 84 >gi|299144534|ref|ZP_07037613.1| putative histidine kinase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517622|gb|EFI41362.1| putative histidine kinase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 385 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Query: 25 IAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 A+ EL++N+ D +S V+ K+ +I D+G GM SE+I Sbjct: 27 AAVLELVKNAYDVGASVVKLEFVD--KTTLKIIDDGDGMDSEDIKK 70 >gi|228924238|ref|ZP_04087509.1| DNA gyrase subunit B [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835456|gb|EEM80826.1| DNA gyrase subunit B [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 640 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 84 >gi|229051162|ref|ZP_04194706.1| DNA gyrase subunit B [Bacillus cereus AH676] gi|228722225|gb|EEL73626.1| DNA gyrase subunit B [Bacillus cereus AH676] Length = 640 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 84 >gi|222087597|ref|YP_002546134.1| two-component sensor histidine kinase protein [Agrobacterium radiobacter K84] gi|221725045|gb|ACM28201.1| two-component sensor histidine kinase protein [Agrobacterium radiobacter K84] Length = 459 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 7/52 (13%) Query: 30 LIENSLD----AESSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A R+E +I G G I+D+G G+ +E QR Sbjct: 361 LLDNAIKYTPVAG--RIEVMITAGSGLWLISISDSGPGIPPDEREAVFQRFY 410 >gi|145578007|gb|ABP82722.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar finitimus] Length = 632 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|81914049|sp|Q8C5W4|MOR2B_MOUSE RecName: Full=MORC family CW-type zinc finger protein 2B; AltName: Full=TCE6 gi|26345832|dbj|BAC36567.1| unnamed protein product [Mus musculus] Length = 1022 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 ELI+N+ DA+++R++ GG + DNG GM ++ +Q ++K + + Sbjct: 35 ELIDNARDADATRIDIYAEKREDLQGGFMLCFL-DNGVGMDPNDVINVIQFGKSAKRTPE 93 Query: 84 FSNIHTFG 91 + I +G Sbjct: 94 STQIGRYG 101 >gi|206970026|ref|ZP_03230979.1| DNA gyrase, B subunit [Bacillus cereus AH1134] gi|218232402|ref|YP_002364860.1| DNA gyrase subunit B [Bacillus cereus B4264] gi|228961757|ref|ZP_04123360.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pakistani str. T13001] gi|229072958|ref|ZP_04206154.1| DNA gyrase subunit B [Bacillus cereus F65185] gi|229112906|ref|ZP_04242437.1| DNA gyrase subunit B [Bacillus cereus Rock1-15] gi|229130739|ref|ZP_04259692.1| DNA gyrase subunit B [Bacillus cereus BDRD-Cer4] gi|229153652|ref|ZP_04281828.1| DNA gyrase subunit B [Bacillus cereus m1550] gi|229181739|ref|ZP_04309062.1| DNA gyrase subunit B [Bacillus cereus 172560W] gi|229193744|ref|ZP_04320685.1| DNA gyrase subunit B [Bacillus cereus ATCC 10876] gi|296500843|ref|YP_003662543.1| DNA gyrase subunit B [Bacillus thuringiensis BMB171] gi|51988024|dbj|BAD44713.1| gyraseB [Bacillus cereus ATCC 14579] gi|206734603|gb|EDZ51772.1| DNA gyrase, B subunit [Bacillus cereus AH1134] gi|218160359|gb|ACK60351.1| DNA gyrase, B subunit [Bacillus cereus B4264] gi|228589769|gb|EEK47647.1| DNA gyrase subunit B [Bacillus cereus ATCC 10876] gi|228601772|gb|EEK59270.1| DNA gyrase subunit B [Bacillus cereus 172560W] gi|228629838|gb|EEK86491.1| DNA gyrase subunit B [Bacillus cereus m1550] gi|228652756|gb|EEL08641.1| DNA gyrase subunit B [Bacillus cereus BDRD-Cer4] gi|228670585|gb|EEL25898.1| DNA gyrase subunit B [Bacillus cereus Rock1-15] gi|228710204|gb|EEL62182.1| DNA gyrase subunit B [Bacillus cereus F65185] gi|228797951|gb|EEM44961.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pakistani str. T13001] gi|296321895|gb|ADH04823.1| DNA gyrase subunit B [Bacillus thuringiensis BMB171] Length = 640 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 84 >gi|328551706|gb|AEB22198.1| DNA gyrase subunit B [Bacillus amyloliquefaciens TA208] Length = 638 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I + + DNG G+ Sbjct: 44 EIVDNSIDEALAGYCTDINIEIEKD--NSITVKDNGRGIP 81 >gi|326486754|gb|ADZ76420.1| DNA gyrase subunit B [Bacillus amyloliquefaciens] Length = 588 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I + + DNG G+ Sbjct: 14 EIVDNSIDEALAGYCTDINIEIEKD--NSITVKDNGRGIP 51 >gi|311070653|ref|YP_003975576.1| DNA gyrase subunit B [Bacillus atrophaeus 1942] gi|310871170|gb|ADP34645.1| DNA gyrase subunit B [Bacillus atrophaeus 1942] Length = 638 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A S + I + + DNG G+ Sbjct: 44 EIVDNSIDEALAGYCSEINIEIEKD--NSITVRDNGRGIP 81 >gi|308171897|ref|YP_003918602.1| DNA gyrase subunit B [Bacillus amyloliquefaciens DSM 7] gi|307604761|emb|CBI41132.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens DSM 7] gi|328909965|gb|AEB61561.1| DNA gyrase (subunit B) [Bacillus amyloliquefaciens LL3] Length = 640 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I + + DNG G+ Sbjct: 46 EIVDNSIDEALAGYCTDINIEIEKD--NSITVKDNGRGIP 83 >gi|154684524|ref|YP_001419685.1| DNA gyrase subunit B [Bacillus amyloliquefaciens FZB42] gi|154350375|gb|ABS72454.1| GyrB [Bacillus amyloliquefaciens FZB42] Length = 638 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I + + DNG G+ Sbjct: 44 EIVDNSIDEALAGYCTDINIEIEKD--NSITVKDNGRGIP 81 >gi|94983849|gb|ABF50629.1| DNA topoisomerase IV subunit B [Spiroplasma taiwanense] Length = 556 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I G + DNG G+ Sbjct: 14 EIVDNSIDEALAGICTEINVSIEKDG--SITVKDNGRGVP 51 >gi|331011884|gb|EGH91940.1| DNA gyrase subunit B [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 805 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 79/247 (31%), Gaps = 26/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE----------EIPMAVQR 74 E+++NS+D A + +I + DNG G+ + E+ M V R Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLR 101 Query: 75 HCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+S L L++ Q + G ++ V Sbjct: 102 -AGGKFDDNSYKV-SGGLHGVGVSVVNALSELLLLTVRRSGKIWEQTYVHGVPQEPMKIV 159 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 + T ++ + K+ +++ IR ++ V +S + Sbjct: 160 GESDTTGTQIH-----FKPSADTFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKE 214 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 ++ G + + N V + + + N F Sbjct: 215 ELFKY--EGGLRAFVEYLNTNKTPVNEVFHFNIQRDDGIGVEIALQW-NDSFNENLLCFT 271 Query: 255 NGRTVQD 261 N +D Sbjct: 272 NNIPQRD 278 >gi|298375679|ref|ZP_06985636.1| conserved hypothetical protein [Bacteroides sp. 3_1_19] gi|298268179|gb|EFI09835.1| conserved hypothetical protein [Bacteroides sp. 3_1_19] Length = 177 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 33 NSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 NS+ A++S +E I +I DNG GM E + + T Sbjct: 14 NSIRAKASDIEIDIQIKDTSICIRIADNGCGMDPETVSLIRNPFYT 59 >gi|229148043|ref|ZP_04276382.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST24] gi|228635468|gb|EEK91959.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST24] Length = 642 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 49 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 86 >gi|254511247|ref|ZP_05123314.1| periplasmic sensor signal transduction histidine kinase [Rhodobacteraceae bacterium KLH11] gi|221534958|gb|EEE37946.1| periplasmic sensor signal transduction histidine kinase [Rhodobacteraceae bacterium KLH11] Length = 592 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 10/56 (17%) Query: 30 LIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N+LDA ++ VE ++A G ++ + DNG G+ E+I + T+K Sbjct: 489 LLRNALDA--TKSVDEPDVEIILAAGDQAVLTVRDNGHGI--EDIENLFEPFYTTK 540 >gi|194043248|ref|XP_001924737.1| PREDICTED: MORC family CW-type zinc finger protein 2 [Sus scrofa] Length = 1022 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ GG + D+G GM + +Q ++K + + Sbjct: 24 ELVDNARDADATRIDIYAERREDLRGGFMLCFL-DDGAGMDPSDAASVIQFGKSAKRTPE 82 Query: 84 FSNIHTFG 91 + I +G Sbjct: 83 STQIGQYG 90 >gi|162457275|ref|YP_001619642.1| putative two-component sensor kinase [Sorangium cellulosum 'So ce 56'] gi|161167857|emb|CAN99162.1| putative two-component sensor kinase [Sorangium cellulosum 'So ce 56'] Length = 651 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 9/58 (15%) Query: 30 LIENSLDAESSRVE----TVIAGGGKS----FFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N LDA +S + + G + DNG G+ + +P + + TSK Sbjct: 530 LVQNGLDA-ASAIRRDPRVSVTIGPLPNDRVRIVVRDNGPGVADDMVPRLFEPYATSK 586 >gi|83313399|ref|YP_423663.1| Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Magnetospirillum magneticum AMB-1] gi|82948240|dbj|BAE53104.1| Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Magnetospirillum magneticum AMB-1] Length = 494 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 8/56 (14%) Query: 26 AIKE-LIENSLD----AESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRH 75 I E L++N++D R+ + G + ++ DNG G+ E+ +RH Sbjct: 388 VIAENLLDNAIDFSPPGG--RISMDLRQENGMALLRVRDNGPGVPEGELERIFERH 441 >gi|110637817|ref|YP_678024.1| DNA gyrase subunit B [Cytophaga hutchinsonii ATCC 33406] gi|110280498|gb|ABG58684.1| DNA gyrase subunit B [Cytophaga hutchinsonii ATCC 33406] Length = 652 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I + +TDNG G+ Sbjct: 48 EVVDNSIDEALAGHCTDITVEINEN--NSITVTDNGRGIP 85 >gi|299820837|ref|ZP_07052726.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Listeria grayi DSM 20601] gi|299817858|gb|EFI85093.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Listeria grayi DSM 20601] Length = 646 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A S +E I + + DNG G+ Sbjct: 52 EIVDNAIDEALAGFCSEIEITIEED--NSITVRDNGRGIP 89 >gi|150007734|ref|YP_001302477.1| hypothetical protein BDI_1092 [Parabacteroides distasonis ATCC 8503] gi|149936158|gb|ABR42855.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 177 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 33 NSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 NS+ A++S +E I +I DNG GM E + + T Sbjct: 14 NSIRAKASDIEIDIQIKDTSICIRIADNGCGMDPETVSLIRNPFYT 59 >gi|114152840|sp|Q9Y6X9|MORC2_HUMAN RecName: Full=MORC family CW-type zinc finger protein 2; AltName: Full=Zinc finger CW-type coiled-coil domain protein 1 Length = 1032 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ GG + D+G GM + +Q ++K + + Sbjct: 35 ELVDNARDADATRIDIYAERREDLRGGFMLCFL-DDGAGMDPSDAASVIQFGKSAKRTPE 93 Query: 84 FSNIHTFG 91 + I +G Sbjct: 94 STQIGQYG 101 >gi|309801982|ref|ZP_07696096.1| DNA gyrase, B subunit [Bifidobacterium dentium JCVIHMP022] gi|308221430|gb|EFO77728.1| DNA gyrase, B subunit [Bifidobacterium dentium JCVIHMP022] Length = 698 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I GG ++ D+G G+ +E+P Sbjct: 74 VYEIVDNSVDEALAGYASHIEVTILPDGG---VRVVDDGRGIPVDEVP 118 >gi|306823992|ref|ZP_07457366.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Bifidobacterium dentium ATCC 27679] gi|304552990|gb|EFM40903.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Bifidobacterium dentium ATCC 27679] Length = 704 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I GG ++ D+G G+ +E+P Sbjct: 80 VYEIVDNSVDEALAGYASHIEVTILPDGG---VRVVDDGRGIPVDEVP 124 >gi|306821071|ref|ZP_07454689.1| sensor histidine kinase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550907|gb|EFM38880.1| sensor histidine kinase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 598 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 10/76 (13%) Query: 30 LIENSL----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFS 85 L+ N++ D + + GK +TD+G G+ +++P R D Sbjct: 500 LVSNAIKYTNDNG-TIIVKTFVNDGKCHISVTDDGIGIPEKDLPFIFDRFY----RVDKG 554 Query: 86 NIHTFGFRGEALPSIG 101 + G G L SI Sbjct: 555 RSRSLGGTGLGL-SIC 569 >gi|225352385|ref|ZP_03743408.1| hypothetical protein BIFPSEUDO_04002 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156892|gb|EEG70261.1| hypothetical protein BIFPSEUDO_04002 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 705 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I GG ++ D+G G+ +E+P Sbjct: 80 VYEIVDNSVDEALAGYASHIEVTILPDGG---VRVVDDGRGIPVDEVP 124 >gi|212715155|ref|ZP_03323283.1| hypothetical protein BIFCAT_00041 [Bifidobacterium catenulatum DSM 16992] gi|212661836|gb|EEB22411.1| hypothetical protein BIFCAT_00041 [Bifidobacterium catenulatum DSM 16992] Length = 705 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I GG ++ D+G G+ +E+P Sbjct: 80 VYEIVDNSVDEALAGYASHIEVTILPDGG---VRVVDDGRGIPVDEVP 124 >gi|171741730|ref|ZP_02917537.1| hypothetical protein BIFDEN_00821 [Bifidobacterium dentium ATCC 27678] gi|283454964|ref|YP_003359528.1| DNA gyrase [Bifidobacterium dentium Bd1] gi|171277344|gb|EDT45005.1| hypothetical protein BIFDEN_00821 [Bifidobacterium dentium ATCC 27678] gi|283101598|gb|ADB08704.1| DNA gyrase [Bifidobacterium dentium Bd1] Length = 704 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I GG ++ D+G G+ +E+P Sbjct: 80 VYEIVDNSVDEALAGYASHIEVTILPDGG---VRVVDDGRGIPVDEVP 124 >gi|145577969|gb|ABP82703.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus mycoides] Length = 632 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|119025023|ref|YP_908868.1| DNA gyrase subunit B [Bifidobacterium adolescentis ATCC 15703] gi|154486351|ref|ZP_02027758.1| hypothetical protein BIFADO_00160 [Bifidobacterium adolescentis L2-32] gi|118764607|dbj|BAF38786.1| DNA gyrase (topoisomerase II) B subunit [Bifidobacterium adolescentis ATCC 15703] gi|154084214|gb|EDN83259.1| hypothetical protein BIFADO_00160 [Bifidobacterium adolescentis L2-32] Length = 712 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I GG ++ D+G G+ +E+P Sbjct: 88 VYEIVDNSVDEALAGYASHIEVTILPDGG---VRVVDDGRGIPVDEVP 132 >gi|30018283|ref|NP_829914.1| DNA gyrase subunit B [Bacillus cereus ATCC 14579] gi|228955743|ref|ZP_04117738.1| DNA gyrase subunit B [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|29893823|gb|AAP07115.1| DNA gyrase subunit B [Bacillus cereus ATCC 14579] gi|228803971|gb|EEM50595.1| DNA gyrase subunit B [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 642 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 49 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 86 >gi|30260200|ref|NP_842577.1| DNA gyrase subunit B [Bacillus anthracis str. Ames] gi|47525259|ref|YP_016608.1| DNA gyrase subunit B [Bacillus anthracis str. 'Ames Ancestor'] gi|49183044|ref|YP_026296.1| DNA gyrase subunit B [Bacillus anthracis str. Sterne] gi|49476686|ref|YP_034365.1| DNA gyrase subunit B [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65317473|ref|ZP_00390432.1| COG0187: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Bacillus anthracis str. A2012] gi|165873014|ref|ZP_02217635.1| DNA gyrase, B subunit [Bacillus anthracis str. A0488] gi|167635023|ref|ZP_02393340.1| DNA gyrase, B subunit [Bacillus anthracis str. A0442] gi|167641730|ref|ZP_02399973.1| DNA gyrase, B subunit [Bacillus anthracis str. A0193] gi|170689461|ref|ZP_02880651.1| DNA gyrase, B subunit [Bacillus anthracis str. A0465] gi|170707498|ref|ZP_02897951.1| DNA gyrase, B subunit [Bacillus anthracis str. A0389] gi|177655278|ref|ZP_02936832.1| DNA gyrase, B subunit [Bacillus anthracis str. A0174] gi|190569295|ref|ZP_03022189.1| DNA gyrase, B subunit [Bacillus anthracis Tsiankovskii-I] gi|196036134|ref|ZP_03103534.1| DNA gyrase, B subunit [Bacillus cereus W] gi|196041949|ref|ZP_03109236.1| DNA gyrase, B subunit [Bacillus cereus NVH0597-99] gi|196045551|ref|ZP_03112782.1| DNA gyrase, B subunit [Bacillus cereus 03BB108] gi|206975909|ref|ZP_03236820.1| DNA gyrase, B subunit [Bacillus cereus H3081.97] gi|217957586|ref|YP_002336128.1| DNA gyrase subunit B [Bacillus cereus AH187] gi|218901211|ref|YP_002449045.1| DNA gyrase, B subunit [Bacillus cereus AH820] gi|227812683|ref|YP_002812692.1| DNA gyrase, B subunit [Bacillus anthracis str. CDC 684] gi|228918105|ref|ZP_04081633.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930499|ref|ZP_04093499.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931511|ref|ZP_04094421.1| DNA gyrase subunit B [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228949215|ref|ZP_04111483.1| DNA gyrase subunit B [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228988722|ref|ZP_04148807.1| DNA gyrase subunit B [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229124996|ref|ZP_04254170.1| DNA gyrase subunit B [Bacillus cereus 95/8201] gi|229142242|ref|ZP_04270766.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST26] gi|229187722|ref|ZP_04314858.1| DNA gyrase subunit B [Bacillus cereus BGSC 6E1] gi|229603398|ref|YP_002864662.1| DNA gyrase, B subunit [Bacillus anthracis str. A0248] gi|254687066|ref|ZP_05150924.1| DNA gyrase subunit B [Bacillus anthracis str. CNEVA-9066] gi|254724151|ref|ZP_05185936.1| DNA gyrase subunit B [Bacillus anthracis str. A1055] gi|254742123|ref|ZP_05199810.1| DNA gyrase subunit B [Bacillus anthracis str. Kruger B] gi|254755967|ref|ZP_05207999.1| DNA gyrase subunit B [Bacillus anthracis str. Vollum] gi|254761353|ref|ZP_05213375.1| DNA gyrase subunit B [Bacillus anthracis str. Australia 94] gi|49066055|sp|Q9X3Y6|GYRB_BACAN RecName: Full=DNA gyrase subunit B gi|30253521|gb|AAP24063.1| DNA gyrase, B subunit [Bacillus anthracis str. Ames] gi|47500407|gb|AAT29083.1| DNA gyrase, B subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49176971|gb|AAT52347.1| DNA gyrase, B subunit [Bacillus anthracis str. Sterne] gi|49328242|gb|AAT58888.1| DNA topoisomerase II, ATP-hydrolyzing (DNA gyrase, subunit B) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51988026|dbj|BAD44714.1| gyraseB [Bacillus anthracis] gi|164711226|gb|EDR16782.1| DNA gyrase, B subunit [Bacillus anthracis str. A0488] gi|167510284|gb|EDR85687.1| DNA gyrase, B subunit [Bacillus anthracis str. A0193] gi|167529497|gb|EDR92247.1| DNA gyrase, B subunit [Bacillus anthracis str. A0442] gi|170127494|gb|EDS96368.1| DNA gyrase, B subunit [Bacillus anthracis str. A0389] gi|170666563|gb|EDT17336.1| DNA gyrase, B subunit [Bacillus anthracis str. A0465] gi|172080205|gb|EDT65297.1| DNA gyrase, B subunit [Bacillus anthracis str. A0174] gi|190559602|gb|EDV13593.1| DNA gyrase, B subunit [Bacillus anthracis Tsiankovskii-I] gi|195991301|gb|EDX55269.1| DNA gyrase, B subunit [Bacillus cereus W] gi|196023758|gb|EDX62434.1| DNA gyrase, B subunit [Bacillus cereus 03BB108] gi|196027204|gb|EDX65824.1| DNA gyrase, B subunit [Bacillus cereus NVH0597-99] gi|206746003|gb|EDZ57399.1| DNA gyrase, B subunit [Bacillus cereus H3081.97] gi|217063046|gb|ACJ77296.1| DNA gyrase, B subunit [Bacillus cereus AH187] gi|218537455|gb|ACK89853.1| DNA gyrase, B subunit [Bacillus cereus AH820] gi|227004428|gb|ACP14171.1| DNA gyrase, B subunit [Bacillus anthracis str. CDC 684] gi|228595790|gb|EEK53474.1| DNA gyrase subunit B [Bacillus cereus BGSC 6E1] gi|228641260|gb|EEK97567.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST26] gi|228658497|gb|EEL14163.1| DNA gyrase subunit B [Bacillus cereus 95/8201] gi|228771034|gb|EEM19515.1| DNA gyrase subunit B [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228810498|gb|EEM56851.1| DNA gyrase subunit B [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228828154|gb|EEM73878.1| DNA gyrase subunit B [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829218|gb|EEM74855.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841585|gb|EEM86701.1| DNA gyrase subunit B [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229267806|gb|ACQ49443.1| DNA gyrase, B subunit [Bacillus anthracis str. A0248] Length = 640 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 84 >gi|313884315|ref|ZP_07818078.1| DNA gyrase, B subunit [Eremococcus coleocola ACS-139-V-Col8] gi|312620468|gb|EFR31894.1| DNA gyrase, B subunit [Eremococcus coleocola ACS-139-V-Col8] Length = 639 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 79/251 (31%), Gaps = 23/251 (9%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR- 74 I+ + E+++NS+D A +E I + + DNG G+ + + Sbjct: 37 IDGLHHLVWEIVDNSIDEALAGYCDHIEVFIEAD--NSITVIDNGRGIPVDIQSKTGRPA 94 Query: 75 --------HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISG 125 H K +D + + G G + A+S HLTL G + Sbjct: 95 AETVYTVLHAGGKFGNDSYKV-SGGLHGVGAAVVNALSTHLTL----EIFREGKIHHLEF 149 Query: 126 EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFT 185 E+ + + + T + + F +P F + + + D I+ +A + + Sbjct: 150 ERGLVTKELEVIGETELVGTKVNF-VPDGTIFTDTTDFKYERLKDRIQELAFLNRGLRIS 208 Query: 186 FSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRG 245 + R + G I + + + + + + + Sbjct: 209 LEDKREERQASDSFFYEGGLKSFIEHLNHAKKPLHEEPIFLEGEMDDIAVEIAL-QYTDS 267 Query: 246 NANQFYVFING 256 + F N Sbjct: 268 YSTNLLSFANN 278 >gi|300871637|ref|YP_003786510.1| DNA gyrase subunit B [Brachyspira pilosicoli 95/1000] gi|300689338|gb|ADK32009.1| DNA Gyrase B subunit [Brachyspira pilosicoli 95/1000] Length = 637 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 24/100 (24%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA---------VQ 73 + E+++NS+D A + I G ++ D+G G+ + P + Sbjct: 42 VYEVVDNSIDEAMAGFCKNIIVTIKKGNI--IEVEDDGRGIPVDMHPKLKISALEVVMTK 99 Query: 74 RHCTSKISDDFSNIHTFGFRG------EALPS--IGAVSH 105 H K ++ + + G G AL + I VS Sbjct: 100 LHAGGKFDNETYKV-SGGLHGVGVSVVNALSTELIAEVSK 138 >gi|300312043|ref|YP_003776135.1| sensory transduction histidine kinase [Herbaspirillum seropedicae SmR1] gi|300074828|gb|ADJ64227.1| sensory transduction histidine kinase protein [Herbaspirillum seropedicae SmR1] Length = 706 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 8/60 (13%) Query: 15 AAG-EI---IERPSIAIKELIENSLDAES---SRVETVIAGGG-KSFFQITDNGFGMTSE 66 A+G ++ +ER I L++N+L+A + +V+ + G ++ +I DNG GM+ + Sbjct: 577 ASGLQVTADVERLERVIGHLVQNALEAVAPVTGQVDVRLDRVGEQALVEIIDNGHGMSEQ 636 >gi|221057450|ref|XP_002261233.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] gi|194247238|emb|CAQ40638.1| hypothetical protein, conserved in Plasmodium species [Plasmodium knowlesi strain H] Length = 525 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 10/63 (15%) Query: 27 IKELIENSLDA------ESSRVETVIAGGGKSF----FQITDNGFGMTSEEIPMAVQRHC 76 +KEL +NS+DA + V+ +I K DNG G +++ + Sbjct: 34 VKELFDNSIDALSSVKGKGKEVQIIIREYKKELSLYEIVCRDNGEGAEIKDLEKFSEIFL 93 Query: 77 TSK 79 TSK Sbjct: 94 TSK 96 >gi|171061006|ref|YP_001793355.1| histidine kinase [Leptothrix cholodnii SP-6] gi|170778451|gb|ACB36590.1| histidine kinase [Leptothrix cholodnii SP-6] Length = 600 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 9/68 (13%) Query: 21 ERPSIAIKELIENSLDAES-------SRVETVIAGG--GKSFFQITDNGFGMTSEEIPMA 71 R + L+ N++DA + + A G G+ ++ D+G G+ ++ + Sbjct: 475 TRLEQVLVNLMGNAIDAMAAAPPGSPRTLRIEAAAGAAGRCVIRVRDSGPGIRADILARL 534 Query: 72 VQRHCTSK 79 + TSK Sbjct: 535 FEPFVTSK 542 >gi|145577963|gb|ABP82700.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar finitimus] Length = 632 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|40788387|dbj|BAA74875.2| KIAA0852 protein [Homo sapiens] Length = 1017 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ GG + D+G GM + +Q ++K + + Sbjct: 20 ELVDNARDADATRIDIYAERREDLRGGFMLCFL-DDGAGMDPSDAASVIQFGKSAKRTPE 78 Query: 84 FSNIHTFG 91 + I +G Sbjct: 79 STQIGQYG 86 >gi|225862062|ref|YP_002747440.1| DNA gyrase, B subunit [Bacillus cereus 03BB102] gi|225788933|gb|ACO29150.1| DNA gyrase, B subunit [Bacillus cereus 03BB102] Length = 640 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 84 >gi|225868765|ref|YP_002744713.1| DNA gyrase subunit B [Streptococcus equi subsp. zooepidemicus] gi|225870279|ref|YP_002746226.1| DNA gyrase subunit B [Streptococcus equi subsp. equi 4047] gi|225699683|emb|CAW93393.1| DNA gyrase subunit B [Streptococcus equi subsp. equi 4047] gi|225702041|emb|CAW99644.1| DNA gyrase subunit B [Streptococcus equi subsp. zooepidemicus] Length = 650 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIQVFIEAD--NSITVIDDGRGIPVD 90 >gi|195977899|ref|YP_002123143.1| DNA gyrase subunit B [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974604|gb|ACG62130.1| DNA gyrase subunit B GyrB [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 650 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIQVFIEAD--NSITVIDDGRGIPVD 90 >gi|72160412|ref|YP_288069.1| DNA gyrase subunit B [Thermobifida fusca YX] gi|71914144|gb|AAZ54046.1| DNA gyrase subunit B [Thermobifida fusca YX] Length = 661 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A ++ +E + A GG ++TDNG G+ + Sbjct: 53 VQEVVDNSVDEALAGYATAIEVTLLADGG---VRVTDNGRGIPVD 94 >gi|326405579|ref|YP_004285661.1| heat shock protein HtpG [Acidiphilium multivorum AIU301] gi|325052441|dbj|BAJ82779.1| heat shock protein HtpG [Acidiphilium multivorum AIU301] Length = 606 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 34/244 (13%), Positives = 75/244 (30%), Gaps = 47/244 (19%) Query: 19 IIERPSI----AIKELIENSLDA------------------ESSRVETVIAGGGKSFFQI 56 ++ ++EL+ N+ DA + + I ++ I Sbjct: 22 VVHSLYSEREIFLRELVANAADATDRRRFLALSDESLALPEGA-AIRISIDKPART-ITI 79 Query: 57 TDNGFGMTSEEI-------PMAVQRHCTSKIS----DDFSN-IHTF--GFRGEALPSIGA 102 D+G GMT+EE+ + R T+ ++ +D N I F GF S Sbjct: 80 ADDGIGMTAEELASHLGTIARSGTRAFTASLAEAKPEDRPNLIGQFGVGF-----YSAFM 134 Query: 103 VS-HLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNP-GTIV--EVRDLFFTIPARLNFL 158 V+ + + SR + + + G + GT + V+ + Sbjct: 135 VADRVEVTSRRAGTDAAHKWSSEGTGGYRIEAATRETPGTDIVLHVKSDADEFLEPVRLE 194 Query: 159 KSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFI 218 + + I+ + + + + + R + +F + + E + Sbjct: 195 TILRKWADHISVPVEIERDGKFQKANEGTALWRRRKADIAEKDYTDFYRHLGHMFDEPWA 254 Query: 219 NNAV 222 Sbjct: 255 TIHW 258 >gi|300716337|ref|YP_003741140.1| Response regulator in two-component regulatory system with DcuR [Erwinia billingiae Eb661] gi|299062173|emb|CAX59289.1| Response regulator in two-component regulatory system with DcuR [Erwinia billingiae Eb661] Length = 546 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 5/55 (9%) Query: 30 LIENSLDAESSR----VETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LIEN+ DA + + V ++ G +++D+G G+ ++++ + +SK Sbjct: 444 LIENAFDALAQQPDGEVSVLLHYQNGWLSCEVSDDGPGIPADQLDAIFEHGFSSK 498 >gi|298206948|ref|YP_003715127.1| PhoR [Croceibacter atlanticus HTCC2559] gi|83849582|gb|EAP87450.1| PhoR [Croceibacter atlanticus HTCC2559] Length = 306 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%) Query: 21 ERPSIAIKELIENSL-----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 ER + L+ NS+ D ++ + K ++TDNG G+ E IP +R Sbjct: 183 ERLQQVLTNLVVNSIKYGEKD-GTTEITVEDFINNKILVRVTDNGEGIKQENIPRLFERF 241 >gi|301051746|ref|YP_003789957.1| DNA topoisomerase IV subunit B [Bacillus anthracis CI] gi|300373915|gb|ADK02819.1| DNA topoisomerase IV subunit B [Bacillus cereus biovar anthracis str. CI] Length = 640 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 84 >gi|189463672|ref|ZP_03012457.1| hypothetical protein BACINT_00003 [Bacteroides intestinalis DSM 17393] gi|189438622|gb|EDV07607.1| hypothetical protein BACINT_00003 [Bacteroides intestinalis DSM 17393] Length = 380 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 3/57 (5%) Query: 26 AIKELIENSLDA--ESSRVETVIAGGGK-SFFQITDNGFGMTSEEIPMAVQRHCTSK 79 I+ L +N++DA + + + + + D G G+ T+K Sbjct: 282 VIENLCKNAIDAMGGAGTLTISVQETSRFWHIDVADTGKGIDKRNFETVFAPGYTTK 338 >gi|121587244|ref|ZP_01677017.1| DNA gyrase, subunit B [Vibrio cholerae 2740-80] gi|121548490|gb|EAX58546.1| DNA gyrase, subunit B [Vibrio cholerae 2740-80] Length = 805 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + I + ++D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGYCKDIVVTIHED--NSVSVSDDGRGIPTEMHPEENVSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L++ Q G + + V Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKVLLTIYRGGKIHTQTYHHGVPQAPLAVVG 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T VR P+ F + + +++ +R ++ VS + + K Sbjct: 159 DTERTGTTVRF----WPSAQTFT-NIEFHYDILAKRLRELSFLNSGVSIKLTDEREEDKK 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 +F G ++ + + + +N G Y F N Sbjct: 214 DHFMYEGG-IQAFVTHLNRNKTPIHEKVFHFNQEREDGISVEVAMQWNDGFQENIYCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|42779086|ref|NP_976333.1| DNA gyrase subunit B [Bacillus cereus ATCC 10987] gi|42735001|gb|AAS38941.1| DNA gyrase, B subunit [Bacillus cereus ATCC 10987] gi|324323999|gb|ADY19259.1| DNA gyrase subunit B [Bacillus thuringiensis serovar finitimus YBT-020] Length = 640 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 84 >gi|330685298|gb|EGG96959.1| DNA gyrase, B subunit [Staphylococcus epidermidis VCU121] Length = 644 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I ++ ++TDNG G+ + Sbjct: 50 EIVDNSIDEALAGYADEINVTIEKD--NWIKVTDNGRGIPVD 89 >gi|326387941|ref|ZP_08209547.1| DNA topoisomerase IV subunit B [Novosphingobium nitrogenifigens DSM 19370] gi|326207987|gb|EGD58798.1| DNA topoisomerase IV subunit B [Novosphingobium nitrogenifigens DSM 19370] Length = 670 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 18/102 (17%) Query: 27 IKELIENSLD---AE-SSRVETVIAG--GGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 + E+++N++D A ++R+E + G I+DNG G+ +E P + S + Sbjct: 52 VAEVLDNAMDEAVAGHANRIEITLEEEPGTPGRITISDNGRGIPVDEHPKYPGK---SAL 108 Query: 81 SDDFSNIHTFG-FRGEALPS--------IGAVSHLTLMSRPP 113 + +H+ G F G+A + I V+ L++++R Sbjct: 109 EVILTTLHSGGKFSGKAYATSGGLHGVGISVVNALSVLTRVE 150 >gi|323703868|ref|ZP_08115502.1| multi-sensor signal transduction histidine kinase [Desulfotomaculum nigrificans DSM 574] gi|323531156|gb|EGB21061.1| multi-sensor signal transduction histidine kinase [Desulfotomaculum nigrificans DSM 574] Length = 558 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 21/90 (23%) Query: 4 RKLSEKIINQIAAG----EIIERPSIAIKELIENSLDA-----ESSRVETVI---AGGGK 51 +KL + + +A G ++I L+ N+ DA + K Sbjct: 426 KKLDPSLPHIMANGHQLQQVIIN-------LLLNARDALEETSGQKSIVITTFTRKQQDK 478 Query: 52 SFF--QITDNGFGMTSEEIPMAVQRHCTSK 79 + ++ DNG G+ E + TSK Sbjct: 479 DWVVVEVKDNGQGIAPENLQKIFNPFYTSK 508 >gi|297708623|ref|XP_002831067.1| PREDICTED: LOW QUALITY PROTEIN: MORC family CW-type zinc finger protein 2-like [Pongo abelii] Length = 1079 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ GG + D+G GM + +Q ++K + + Sbjct: 35 ELVDNARDADATRIDIYAERREDLRGGFMLCFL-DDGAGMDPSDAASVIQFGKSAKRTPE 93 Query: 84 FSNIHTFG 91 + I +G Sbjct: 94 STQIGQYG 101 >gi|229199683|ref|ZP_04326326.1| DNA gyrase subunit B [Bacillus cereus m1293] gi|228583778|gb|EEK41953.1| DNA gyrase subunit B [Bacillus cereus m1293] Length = 640 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 84 >gi|118475783|ref|YP_892934.1| DNA gyrase subunit B [Bacillus thuringiensis str. Al Hakam] gi|118415008|gb|ABK83427.1| DNA gyrase subunit B [Bacillus thuringiensis str. Al Hakam] Length = 645 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 52 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 89 >gi|78067683|ref|YP_370452.1| histidine kinase [Burkholderia sp. 383] gi|77968428|gb|ABB09808.1| histidine kinase [Burkholderia sp. 383] Length = 669 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 20/91 (21%) Query: 22 RPSIAIKELIENSLDAESS----RVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + +E IA + ++ DNG+G+ + +P + Sbjct: 549 RLEQVLINLLGNALDAVAGVAVPAIEVTIAVSAATLAVEVRDNGYGIAPDLLPRLFEPFF 608 Query: 77 TSKISDDFSNIHTFGFRGEAL-----PSIGA 102 T+K G RG L SI + Sbjct: 609 TTK---------EMG-RGLGLGLAISSSIAS 629 >gi|302387483|ref|YP_003823305.1| histidine kinase [Clostridium saccharolyticum WM1] gi|302198111|gb|ADL05682.1| histidine kinase [Clostridium saccharolyticum WM1] Length = 307 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Query: 30 LIENSLD-AESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQR 74 L++N + + +++++ + G + +ITDNG G+ ++P +R Sbjct: 210 LVQNVITHSRATQIKIEMTQEGNNIEIRITDNGIGIEKADLPHIFER 256 >gi|239637290|ref|ZP_04678277.1| DNA gyrase, B subunit [Staphylococcus warneri L37603] gi|239597127|gb|EEQ79637.1| DNA gyrase, B subunit [Staphylococcus warneri L37603] Length = 640 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I ++ ++TDNG G+ + Sbjct: 46 EIVDNSIDEALAGYADEINVTIEKD--NWIKVTDNGRGIPVD 85 >gi|256370829|ref|YP_003108653.1| DNA gyrase, B subunit [Acidimicrobium ferrooxidans DSM 10331] gi|256007413|gb|ACU52980.1| DNA gyrase, B subunit [Acidimicrobium ferrooxidans DSM 10331] Length = 647 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 29 ELIENSLD---AES-SRVETVI-AGGGKSFFQITDNGFGMTSE 66 E+++N++D A + + ++ I A GG ++ DNG G+ + Sbjct: 52 EVVDNAVDEVMAGACTEIDVTILADGGC---RVEDNGRGIPVD 91 >gi|222093779|ref|YP_002527826.1| DNA gyrase subunit b [Bacillus cereus Q1] gi|221237824|gb|ACM10534.1| DNA gyrase, B subunit [Bacillus cereus Q1] Length = 640 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 84 >gi|72162949|ref|YP_290606.1| sensor histidine kinase [Thermobifida fusca YX] gi|71916681|gb|AAZ56583.1| ATP-binding region, ATPase-like:Histidine kinase A, N-terminal [Thermobifida fusca YX] Length = 427 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 14 IAAGEIIERPSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAV 72 + A + + + L+EN+ + V + G +++D G G+ + +P Sbjct: 312 LTAMTVPTDLAQILATLVENAFKHGAGTVTVRRVETGQSVRIEVSDEGEGIPEDLVPRIF 371 Query: 73 QRHCTS 78 +R TS Sbjct: 372 EREVTS 377 >gi|256840000|ref|ZP_05545509.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|262381758|ref|ZP_06074896.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|301310230|ref|ZP_07216169.1| conserved hypothetical protein [Bacteroides sp. 20_3] gi|256738930|gb|EEU52255.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|262296935|gb|EEY84865.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|300831804|gb|EFK62435.1| conserved hypothetical protein [Bacteroides sp. 20_3] Length = 177 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 33 NSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 NS+ A++S +E I +I DNG GM E + + T Sbjct: 14 NSIRAKASDIEIDIQIKDTSICIRIADNGCGMDPETVSLIRNPFYT 59 >gi|188588474|ref|YP_001920237.1| anti-sigma F factor [Clostridium botulinum E3 str. Alaska E43] gi|226732537|sp|B2V2G9|SP2AB_CLOBA RecName: Full=Anti-sigma F factor; AltName: Full=Stage II sporulation protein AB gi|188498755|gb|ACD51891.1| anti-sigma F factor [Clostridium botulinum E3 str. Alaska E43] Length = 143 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 22/98 (22%) Query: 3 IRKLSEKIINQIAAGEIIERPSIAIKELIENSL--------DAESSRVETVIAGGGKSFF 54 I +L I++I+ A+ E + NS+ D ++E I G + Sbjct: 28 IAQLDP-TIDEIS------DVKTAVSEAVTNSIIHGYENKED-GIIKIEVEICDGEVT-I 78 Query: 55 QITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGF 92 +ITDNG G+ E+IP ++ TS D GF Sbjct: 79 EITDNGKGI--EDIPKVMEPLYTS--RPDLER-SGMGF 111 >gi|88602689|ref|YP_502867.1| putative PAS/PAC sensor protein [Methanospirillum hungatei JF-1] gi|88188151|gb|ABD41148.1| putative PAS/PAC sensor protein [Methanospirillum hungatei JF-1] Length = 1251 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 18/91 (19%) Query: 9 KIINQIAAGEI-IERPSIAIKEL-------------IENSL--DAESSRVETVIAGGGKS 52 +I+ +A+ ++ IE + E+ +E +L D SR+ + G++ Sbjct: 1122 TLIHALASHQVVIENTVSPVLEIYADPMMRNVFMIILEYALKKDRGVSRLRISVTMSGRT 1181 Query: 53 FFQI-TDNGFGMTSEEIPMAVQRHCTSKISD 82 I DNG G+ ++E + H SK SD Sbjct: 1182 LILICEDNGAGIPADEKEIIFM-HGNSKYSD 1211 >gi|288555205|ref|YP_003427140.1| PAS two-component sensor histidine kinase [Bacillus pseudofirmus OF4] gi|288546365|gb|ADC50248.1| PAS two-component sensor histidine kinase [Bacillus pseudofirmus OF4] Length = 541 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 30 LIENSLDAESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTSK 79 L++N+++AE+ + I S +I DNG G++ E I + + K Sbjct: 448 LLKNAIEAEAKNICIHIKKQDDSIIVRIADNGQGISEERIKKLGEPFYSEK 498 >gi|228995401|ref|ZP_04155073.1| DNA gyrase subunit B [Bacillus mycoides Rock3-17] gi|229003015|ref|ZP_04160874.1| DNA gyrase subunit B [Bacillus mycoides Rock1-4] gi|228758243|gb|EEM07429.1| DNA gyrase subunit B [Bacillus mycoides Rock1-4] gi|228764354|gb|EEM13229.1| DNA gyrase subunit B [Bacillus mycoides Rock3-17] Length = 640 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 84 >gi|325299173|ref|YP_004259090.1| DNA gyrase, B subunit [Bacteroides salanitronis DSM 18170] gi|324318726|gb|ADY36617.1| DNA gyrase, B subunit [Bacteroides salanitronis DSM 18170] Length = 654 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I + + DNG G+ + Sbjct: 47 VYEVVDNSIDEALAGYCTHIEVTINED--NSITVQDNGRGIPVD 88 >gi|315222422|ref|ZP_07864326.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Streptococcus anginosus F0211] gi|315188507|gb|EFU22218.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Streptococcus anginosus F0211] Length = 797 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 20/73 (27%) Query: 25 IAIKELIENSLDAESSRVETVIAGGGK--------SFFQITDNGFGMTSEEIPMAVQRHC 76 AI EL++NS DA S++V I G + +I D+G GM+ + Sbjct: 30 SAILELVKNSYDAFSNQVNIRIDGETIGKGKDKKATSIEIIDDGQGMSLD---------- 79 Query: 77 TSKISDDFSNIHT 89 KI D F + T Sbjct: 80 --KIIDVFFTLGT 90 >gi|240850782|ref|YP_002972182.1| DNA topoisomerase IV subunit B [Bartonella grahamii as4aup] gi|240267905|gb|ACS51493.1| DNA topoisomerase IV subunit B [Bartonella grahamii as4aup] Length = 688 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 6/45 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 E+I+N++D A + +E + G + +TDNG G+ E P Sbjct: 85 EIIDNAMDEAVAGYADFIEVSLDRNG--YITVTDNGRGIPVENHP 127 >gi|224024595|ref|ZP_03642961.1| hypothetical protein BACCOPRO_01321 [Bacteroides coprophilus DSM 18228] gi|224017817|gb|EEF75829.1| hypothetical protein BACCOPRO_01321 [Bacteroides coprophilus DSM 18228] Length = 656 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I + + DNG G+ + Sbjct: 47 VYEVVDNSIDEALAGYCTHIEVTINED--NSITVQDNGRGIPVD 88 >gi|198274299|ref|ZP_03206831.1| hypothetical protein BACPLE_00442 [Bacteroides plebeius DSM 17135] gi|198272789|gb|EDY97058.1| hypothetical protein BACPLE_00442 [Bacteroides plebeius DSM 17135] Length = 654 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I + + DNG G+ + Sbjct: 47 VYEVVDNSIDEALAGYCTHIEVTINED--NSITVQDNGRGIPVD 88 >gi|189462935|ref|ZP_03011720.1| hypothetical protein BACCOP_03637 [Bacteroides coprocola DSM 17136] gi|189430362|gb|EDU99346.1| hypothetical protein BACCOP_03637 [Bacteroides coprocola DSM 17136] Length = 654 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I + + DNG G+ + Sbjct: 47 VYEVVDNSIDEALAGYCTHIEVTINED--NSITVQDNGRGIPVD 88 >gi|115446095|ref|NP_001046827.1| Os02g0469300 [Oryza sativa Japonica Group] gi|47497336|dbj|BAD19377.1| ATP-binding region, ATPase-like domain-containing protein-like [Oryza sativa Japonica Group] gi|113536358|dbj|BAF08741.1| Os02g0469300 [Oryza sativa Japonica Group] gi|215697210|dbj|BAG91204.1| unnamed protein product [Oryza sativa Japonica Group] Length = 803 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 11/71 (15%) Query: 29 ELIENSLD--A-ESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++NSLD A ++ V + G + D+G GM +++ + + SK+ Sbjct: 153 ELLDNSLDEVANGATYVNIDMLENKKDGTRMVSVEDDGGGMDPDKMWHCMSLGYSAKSKV 212 Query: 81 SDDFSNIHTFG 91 D I +G Sbjct: 213 KD---TIGQYG 220 >gi|326520115|dbj|BAK03982.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 656 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 6/55 (10%) Query: 23 PSIAIKELIENSLD---AESSRVETV--I-AGGGKSFFQITDNGFGMTSEEIPMA 71 P A+ EL++N++D ++R+ I G + D+G GM + + Sbjct: 135 PFGAVAELLDNAVDEIKTGATRIVVDKIINKRNGSPALLVHDDGGGMDPDSMRRC 189 >gi|298711438|emb|CBJ32578.1| conserved unknown protein [Ectocarpus siliculosus] Length = 399 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 6/49 (12%) Query: 27 IKELIENSLDA---ES-SRVETVIAGGGKS--FFQITDNGFGMTSEEIP 69 + ELI+NS+ A + +VE + GKS F + DNG GM ++ + Sbjct: 123 VAELIDNSIQATRGNAERKVEVEVVLNGKSTSFLVVRDNGCGMHAKGLE 171 >gi|228994212|ref|ZP_04154112.1| DNA gyrase subunit B [Bacillus pseudomycoides DSM 12442] gi|228765664|gb|EEM14318.1| DNA gyrase subunit B [Bacillus pseudomycoides DSM 12442] Length = 640 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 84 >gi|229035151|ref|ZP_04189097.1| DNA gyrase subunit B [Bacillus cereus AH1271] gi|228728217|gb|EEL79247.1| DNA gyrase subunit B [Bacillus cereus AH1271] Length = 640 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 84 >gi|297567023|ref|YP_003685995.1| integral membrane sensor signal transduction histidine kinase [Meiothermus silvanus DSM 9946] gi|296851472|gb|ADH64487.1| integral membrane sensor signal transduction histidine kinase [Meiothermus silvanus DSM 9946] Length = 475 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 20 IERPSIAIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 +ER ++ N+ A++S + V + ++ DNG G+ E +P +R Sbjct: 360 VERLHQVFANMVSNAQKAQASEIRLVARDLQERVVIRVEDNGEGIPPEHLPHLFERFY 417 >gi|222622834|gb|EEE56966.1| hypothetical protein OsJ_06680 [Oryza sativa Japonica Group] Length = 812 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 11/71 (15%) Query: 29 ELIENSLD--A-ESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++NSLD A ++ V + G + D+G GM +++ + + SK+ Sbjct: 153 ELLDNSLDEVANGATYVNIDMLENKKDGTRMVSVEDDGGGMDPDKMWHCMSLGYSAKSKV 212 Query: 81 SDDFSNIHTFG 91 D I +G Sbjct: 213 KD---TIGQYG 220 >gi|19909599|dbj|BAB86995.1| DNA gyrase subunit B [Halomonas halmophila] Length = 378 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 EL++NS+D A S + +I ++DNG G+ ++ Sbjct: 12 ELVDNSIDEALAGYCSEIRVIIHPD--ESITVSDNGRGIPTD 51 >gi|229844202|ref|ZP_04464343.1| DNA topoisomerase IV subunit B [Haemophilus influenzae 6P18H1] gi|229847154|ref|ZP_04467259.1| DNA topoisomerase IV subunit B [Haemophilus influenzae 7P49H1] gi|229809983|gb|EEP45704.1| DNA topoisomerase IV subunit B [Haemophilus influenzae 7P49H1] gi|229813196|gb|EEP48884.1| DNA topoisomerase IV subunit B [Haemophilus influenzae 6P18H1] gi|309973201|gb|ADO96402.1| DNA topoisomerase IV, subunit B [Haemophilus influenzae R2846] Length = 632 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++++E ++ ++TDNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFATKIEVILHPD--QSIKVTDNGRGMPVD 77 >gi|326942563|gb|AEA18459.1| sporulation kinase [Bacillus thuringiensis serovar chinensis CT-43] Length = 406 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVKDG--IIIQVKDEGCGIPKDKIPKLNEAFYTTK 365 >gi|325295082|ref|YP_004281596.1| multi-sensor signal transduction histidine kinase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065530|gb|ADY73537.1| multi-sensor signal transduction histidine kinase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 649 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 7/65 (10%) Query: 20 IERPSIAIKE----LIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 I+R ++E L++NS++A +++V + GK F DNG G++ E Sbjct: 551 IDR--SLLREVFTNLVDNSIEAGATKVNVSTTSKDGKVFVVFQDNGPGISEEIADKLFAP 608 Query: 75 HCTSK 79 + ++K Sbjct: 609 YVSTK 613 >gi|323343328|ref|ZP_08083555.1| sensor histidine kinase [Prevotella oralis ATCC 33269] gi|323095147|gb|EFZ37721.1| sensor histidine kinase [Prevotella oralis ATCC 33269] Length = 388 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 38/86 (44%), Gaps = 17/86 (19%) Query: 3 IRKLSE-KIINQIAAGE---IIERPSIAIKELIENSLDA----ESSRVETVIAGG-GKSF 53 I+ L + ++ ++ A +IE S +N++DA + + + K+ Sbjct: 269 IKDLPDHDVVIKLNASLFEWVIENLS-------KNAVDAMGGEGGT-ITLRVEDAKDKAV 320 Query: 54 FQITDNGFGMTSEEIPMAVQRHCTSK 79 ++TD G G+ +++ + T+K Sbjct: 321 VEVTDTGKGIRKKDLRNVFRPGFTTK 346 >gi|254705095|ref|ZP_05166923.1| sensor protein chvG [Brucella suis bv. 3 str. 686] Length = 589 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ +AG G + DNG G+ E I +R Sbjct: 473 RFGQVVSNLIENARSFVPDDTG--RIVVTLAGEGNRLRILVEDNGPGIPIENIERIFERF 530 Query: 76 CT 77 T Sbjct: 531 YT 532 >gi|237784642|ref|YP_002905347.1| DNA gyrase subunit B [Corynebacterium kroppenstedtii DSM 44385] gi|237757554|gb|ACR16804.1| DNA gyrase subunit B [Corynebacterium kroppenstedtii DSM 44385] Length = 682 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 60/174 (34%), Gaps = 27/174 (15%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT----SEEIPMA----VQRH 75 E+++NS+D A ++ V+ I GG ++ D+G G+ P Q H Sbjct: 50 EVVDNSVDEAMAGYATHVDVTIMKDGG---IEVVDDGRGIPVSMHPSGAPTVQVVMTQLH 106 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN--NTGAQIAISGEKISSVRP 133 K +D + + G G + + A+S +R G + + Sbjct: 107 AGGKFDNDSYAV-SGGLHGVGISVVNALS-----TRVEAEIKRDGYRWYQNFTDAIPDEL 160 Query: 134 VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFS 187 V F+ P + ++ + + I ++ MA + T + Sbjct: 161 VQGKKARGTGTTIRFWPDP---DVFETTEFKFETIARRLQEMAFLNKGLYITLT 211 >gi|228910630|ref|ZP_04074442.1| Sensor histidine kinase [Bacillus thuringiensis IBL 200] gi|228849045|gb|EEM93887.1| Sensor histidine kinase [Bacillus thuringiensis IBL 200] Length = 392 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 300 LIKNAIEAMSVGGTITIKVTVKDG--IIIQVKDEGCGIPKDKIPKLNEAFYTTK 351 >gi|228923531|ref|ZP_04086812.1| Sensor histidine kinase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836108|gb|EEM81468.1| Sensor histidine kinase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 392 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 300 LIKNAIEAMSVGGTITIKVTVKDG--IIIQVKDEGCGIPKDKIPKLNEAFYTTK 351 >gi|256824698|ref|YP_003148658.1| signal transduction histidine kinase [Kytococcus sedentarius DSM 20547] gi|256688091|gb|ACV05893.1| signal transduction histidine kinase [Kytococcus sedentarius DSM 20547] Length = 345 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 35/90 (38%), Gaps = 13/90 (14%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQI-TDNGFGMTSEEIPMAVQRHCTSKIS 81 S + LIENSL + I G S + +D G G+ E +RH TS Sbjct: 244 LSQVLSTLIENSLTYGEGIITLRIEDNGPSVQLVLSDEGPGIAPEIADRIFERHVTS--- 300 Query: 82 DDFSNIHTFGFRGEALPS--IGAV-SHLTL 108 T G RG AL I AV L L Sbjct: 301 ----GAGT-G-RGLALARQIITAVGGRLEL 324 >gi|218263012|ref|ZP_03477264.1| hypothetical protein PRABACTJOHN_02945 [Parabacteroides johnsonii DSM 18315] gi|218223010|gb|EEC95660.1| hypothetical protein PRABACTJOHN_02945 [Parabacteroides johnsonii DSM 18315] Length = 444 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 14/87 (16%) Query: 2 KIRKLSEKIINQIAAGEIIER---PSIAIKELIENSLDA--ESSRVETVIAGG----GKS 52 KI+ + + ++I + L++N+LDA R + ++ G GK+ Sbjct: 320 KIKIIP-ATAHL----QVIADKGLIEQVLINLVKNALDATRHCLRPQIELSAGINEEGKT 374 Query: 53 FFQITDNGFGMTSEEIPMAVQRHCTSK 79 F +++DNG G+ E T+K Sbjct: 375 FIRVSDNGTGIPVEVQERIFIPFFTTK 401 >gi|163844110|ref|YP_001628514.1| sensor protein chvG [Brucella suis ATCC 23445] gi|163674833|gb|ABY38944.1| Sensor protein chvG [Brucella suis ATCC 23445] Length = 601 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ +AG G + DNG G+ E I +R Sbjct: 485 RFGQVVSNLIENARSFVPDDTG--RIVVTLAGEGNRLRILVEDNGPGIPIENIERIFERF 542 Query: 76 CT 77 T Sbjct: 543 YT 544 >gi|161620005|ref|YP_001593892.1| sensor protein chvG [Brucella canis ATCC 23365] gi|260567437|ref|ZP_05837907.1| BvrS protein [Brucella suis bv. 4 str. 40] gi|261755798|ref|ZP_05999507.1| sensory protein BvrS [Brucella suis bv. 3 str. 686] gi|161336816|gb|ABX63121.1| Sensor protein chvG [Brucella canis ATCC 23365] gi|260156955|gb|EEW92035.1| BvrS protein [Brucella suis bv. 4 str. 40] gi|261745551|gb|EEY33477.1| sensory protein BvrS [Brucella suis bv. 3 str. 686] Length = 601 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ +AG G + DNG G+ E I +R Sbjct: 485 RFGQVVSNLIENARSFVPDDTG--RIVVTLAGEGNRLRILVEDNGPGIPIENIERIFERF 542 Query: 76 CT 77 T Sbjct: 543 YT 544 >gi|195952393|ref|YP_002120683.1| integral membrane sensor signal transduction histidine kinase [Hydrogenobaculum sp. Y04AAS1] gi|195932005|gb|ACG56705.1| integral membrane sensor signal transduction histidine kinase [Hydrogenobaculum sp. Y04AAS1] Length = 598 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 5/50 (10%) Query: 30 LIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+NS++++S++++ I DNG G+ +EI + +SK Sbjct: 516 LIQNSIESKSTKIKIEIKP---KEIIYQDNGEGI--KEISKIFLPYYSSK 560 >gi|23502939|ref|NP_699066.1| sensor histidine kinase BvrS [Brucella suis 1330] gi|23348973|gb|AAN30981.1| sensor histidine kinase BvrS, putative [Brucella suis 1330] Length = 601 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 22 RPSIAIKELIENSL-----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 R + LIEN+ D R+ +AG G + DNG G+ E I +R Sbjct: 485 RFGQVVSNLIENARSFVPDDTG--RIVVTLAGEGNRLRILVEDNGPGIPIENIERIFERF 542 Query: 76 CT 77 T Sbjct: 543 YT 544 >gi|327413117|emb|CAX68146.1| conserved hypothetical protein [Salmonella enterica subsp. enterica] Length = 795 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 11/76 (14%) Query: 6 LSEKIINQI---AAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 L +II+ I AG AI ELI NS+DA + V I+ G S D+G G Sbjct: 7 LDPQIIHHIIYSQAG----SIGKAIIELIMNSVDAGAGAVMIDISPEGFSC---RDDGQG 59 Query: 63 M-TSEEIPMAVQRHCT 77 + +++ R T Sbjct: 60 FASRDDVIRYFGRFGT 75 >gi|228941960|ref|ZP_04104503.1| Sensor histidine kinase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974891|ref|ZP_04135452.1| Sensor histidine kinase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981483|ref|ZP_04141780.1| Sensor histidine kinase [Bacillus thuringiensis Bt407] gi|228778162|gb|EEM26432.1| Sensor histidine kinase [Bacillus thuringiensis Bt407] gi|228784744|gb|EEM32762.1| Sensor histidine kinase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817629|gb|EEM63711.1| Sensor histidine kinase [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 334 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 242 LIKNAIEAMSVGGTITIKVTVKDG--IIIQVKDEGCGIPKDKIPKLNEAFYTTK 293 >gi|108762891|ref|YP_631794.1| putative sensor histidine kinase [Myxococcus xanthus DK 1622] gi|108466771|gb|ABF91956.1| putative sensor histidine kinase [Myxococcus xanthus DK 1622] Length = 716 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 21/131 (16%) Query: 18 EIIERPSIAIKELIENSLDAESSRVETVIAG-----GGKSFFQITDNGFGMTSEEIPMAV 72 E+I +IA+ EL+ N+ DA++ V+ GG I D+G GM+ E + + Sbjct: 43 ELISDETIAVVELVRNAWDADALSVKVAFHNAQNALGG--SLDIIDDGHGMSKETVLGSW 100 Query: 73 QRHCT--SKISDDFSNIH-TFGFRGEALPSIGAVS------HLTLMSRPPQNNTGAQIAI 123 + T K+ + G +G IG + L L+++ T + + Sbjct: 101 LQPATPDKKLRHASPSGRPLLGKKG-----IGRFAADKLARKLVLITKKEGETTATRAVV 155 Query: 124 SGEKISSVRPV 134 + Sbjct: 156 DWNQFDDPMKF 166 >gi|118420998|dbj|BAF37224.1| DNA gyrase subunit B [Marinobacter hydrocarbonoclasticus] Length = 475 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 75/252 (29%), Gaps = 36/252 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 EL++NS+D A S + +I + DNG G+ EE A + H Sbjct: 16 ELVDNSIDEALAGYCSEIGIIIHPD--ESITVKDNGRGIPVDLHEEEGVSAAEVIMTVLH 73 Query: 76 CTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS 129 K D+ + + G G AL S LTL R ++ Sbjct: 74 AGGKFDDNSYKV-SGGLHGVGVSVVNALSS-----SLTLTIRRDG-----KVYEQSYTHG 122 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 G IP+ F Q +++ +R +A V + Sbjct: 123 VPNAPLGEVGETDASGTKVHFIPSPETFT-HIQFHYDILAKRLRELAFLNSGVRIRLTDE 181 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ 249 +S + ++ G + + N V + E + + N Sbjct: 182 RSGKEEI--FEYEGGLRAFVEHLNTNKTAINRVFHFNREREDGIAVEVAMQW-NDAFQEN 238 Query: 250 FYVFINGRTVQD 261 Y F N +D Sbjct: 239 IYCFTNNIPQRD 250 >gi|120552949|ref|YP_957300.1| DNA gyrase subunit B [Marinobacter aquaeolei VT8] gi|120322798|gb|ABM17113.1| DNA gyrase subunit B [Marinobacter aquaeolei VT8] Length = 804 Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 75/252 (29%), Gaps = 36/252 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 EL++NS+D A S + +I + DNG G+ EE A + H Sbjct: 43 ELVDNSIDEALAGYCSEIGIIIHPD--ESITVKDNGRGIPVDLHEEEGVSAAEVIMTVLH 100 Query: 76 CTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS 129 K D+ + + G G AL S LTL R ++ Sbjct: 101 AGGKFDDNSYKV-SGGLHGVGVSVVNALSS-----SLTLTIRRDG-----KVYEQSYTHG 149 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 G IP+ F Q +++ +R +A V + Sbjct: 150 VPNAPLGEVGETDASGTKVHFIPSPETFT-HIQFHYDILAKRLRELAFLNSGVRIRLTDE 208 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ 249 +S + ++ G + + N V + E + + N Sbjct: 209 RSGKEEI--FEYEGGLRAFVEHLNTNKTAINRVFHFNREREDGIAVEVAMQW-NDAFQEN 265 Query: 250 FYVFINGRTVQD 261 Y F N +D Sbjct: 266 IYCFTNNIPQRD 277 >gi|323496192|ref|ZP_08101250.1| hypothetical protein VISI1226_11586 [Vibrio sinaloensis DSM 21326] gi|323318469|gb|EGA71422.1| hypothetical protein VISI1226_11586 [Vibrio sinaloensis DSM 21326] Length = 650 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDA-ESSR---VETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + LI N++DA ES++ + + S + DNG G+ +++IP Sbjct: 543 RLEQVLVNLISNAIDAVESTQEPLIVVSVVRLENSVTIAVKDNGKGILADDIPHIFDPFY 602 Query: 77 TSK 79 T K Sbjct: 603 TQK 605 >gi|313886485|ref|ZP_07820201.1| hypothetical protein HMPREF9294_1409 [Porphyromonas asaccharolytica PR426713P-I] gi|312924031|gb|EFR34824.1| hypothetical protein HMPREF9294_1409 [Porphyromonas asaccharolytica PR426713P-I] Length = 561 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 E I N+ DA++ RV I KS I D+G GMTS++ R SK Sbjct: 31 EAISNAWDADAKRVSITIDRD-KSLLIIRDDGIGMTSKDFQDKFLRIGYSK 80 >gi|226359826|ref|YP_002777604.1| two-component histidine kinase [Rhodococcus opacus B4] gi|226238311|dbj|BAH48659.1| putative two-component histidine kinase [Rhodococcus opacus B4] Length = 425 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Query: 23 PSIAIKELIENSLD-AESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC---T 77 A +EL+ N + A + V ++ GG + +TD+G G++ E I ++ R T Sbjct: 321 LFSAARELLSNVVKHARARTVRVELSRTGGHAVLDVTDDGCGISREAIDRSLSRGHIGLT 380 Query: 78 S 78 S Sbjct: 381 S 381 >gi|225456400|ref|XP_002280533.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1096 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 11/71 (15%) Query: 29 ELIENSLDA---ESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++NSLD ++ V + G I DNG GM E++ + + SKI Sbjct: 443 ELLDNSLDEICNGATYVNVDMLENKKDGNRMLLIEDNGGGMDPEKMRQCMSLGYSAKSKI 502 Query: 81 SDDFSNIHTFG 91 ++ I +G Sbjct: 503 AN---TIGQYG 510 >gi|149175056|ref|ZP_01853679.1| Molecular chaperone, HSP90 family protein [Planctomyces maris DSM 8797] gi|148846034|gb|EDL60374.1| Molecular chaperone, HSP90 family protein [Planctomyces maris DSM 8797] Length = 861 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 31/140 (22%) Query: 27 IKELIENS---L--------DAESSRVETVIAGGGKSFFQITDNGFGMTSEEI---PMAV 72 I+ELI+N+ + DA S R++ F I DNG GM +I + Sbjct: 27 IRELIQNAHDGILRRQSRESDAFSPRIDIESRPDELQFI-IRDNGLGMDLNDIGEYLAVI 85 Query: 73 QRHCTSKISDDFSN-IHTFGFRGEALPSIGAVS------HLTLMSRPPQNNTGAQIAISG 125 R T D + + FG IG +S + + +R ++ G + + SG Sbjct: 86 GRGATRLEKGDVTGLVGQFG--------IGFLSAFIVAERVEVETRKTGDDDGWKWSNSG 137 Query: 126 EKISSVRPVAMNPG-TIVEV 144 + +V V+ + T V V Sbjct: 138 TQEYTVSNVSKDSFGTTVTV 157 >gi|310827230|ref|YP_003959587.1| multi-sensor signal transduction histidine kinase [Eubacterium limosum KIST612] gi|308738964|gb|ADO36624.1| multi-sensor signal transduction histidine kinase [Eubacterium limosum KIST612] Length = 585 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 5/51 (9%) Query: 30 LIENSL---DAESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ D RV+ + G + D G G+ E+IP +R Sbjct: 483 LVDNAIKYTDEG-GRVDVSVYENGAHFCILVEDTGCGIPEEDIPRIFERFY 532 >gi|225851073|ref|YP_002731307.1| DNA gyrase, B subunit [Persephonella marina EX-H1] gi|225645970|gb|ACO04156.1| DNA gyrase, B subunit [Persephonella marina EX-H1] Length = 805 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 ELI+N++D A + + VI G + D+G G+ + Sbjct: 49 ELIDNAVDEAMAGFAKNISVVIHEDG--SVTVEDDGRGIPVD 88 >gi|145593129|ref|YP_001157426.1| hypothetical protein Strop_0567 [Salinispora tropica CNB-440] gi|145302466|gb|ABP53048.1| hypothetical protein Strop_0567 [Salinispora tropica CNB-440] Length = 438 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 8/108 (7%) Query: 31 IENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHT 89 ++NS+ A ++RVE I G I D+G GM++ + A+ R+ + D Sbjct: 35 VDNSVAAGANRVEIDIVFDGFDSWVMIADDGEGMSANGLLEAL-RYGS---RRD-YGRGD 89 Query: 90 FGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 G G L S+ LT++SR + + + Sbjct: 90 LGRYGLGLKTASLSQCRSLTVVSRRRAATARTVSRMIDLDLIAEVDDW 137 >gi|158320928|ref|YP_001513435.1| histidine kinase [Alkaliphilus oremlandii OhILAs] gi|158141127|gb|ABW19439.1| histidine kinase [Alkaliphilus oremlandii OhILAs] Length = 705 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Query: 26 AIKELIENSLDAESSRVETV---IAGGGKSFFQITDNGFGMTSE 66 A+ ELI+NS DA++ V+ + I DNG GM+ + Sbjct: 28 AVLELIKNSYDADAKEVKVTMQNLDDPLAGTIIIEDNGDGMSLD 71 >gi|71725922|gb|AAZ39079.1| gyrase subunit B [Exiguobacterium antarcticum] Length = 513 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG G+ + Sbjct: 21 EIVDNSIDEALAGYCDTIKVTIESG--NSILVEDNGRGIPVD 60 >gi|70733517|ref|YP_257156.1| DNA gyrase subunit B [Pseudomonas fluorescens Pf-5] gi|68347816|gb|AAY95422.1| DNA gyrase, B subunit [Pseudomonas fluorescens Pf-5] Length = 805 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 76/246 (30%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S +++ Q + G ++ V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEELILTVRRSGKIWEQTYVHGVPQERMKIVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ K+ +++ IR ++ V +S + + Sbjct: 161 DSETTGTQIH-----FKPSAETFKNIHFSWDVLAKRIRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V E + + N F N Sbjct: 216 LFKY--EGGLRAFVEYLNTNKTAVNQVFHFNIQREDGIGVEIALQW-NDSFNENLLCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|302387090|ref|YP_003822912.1| integral membrane sensor signal transduction histidine kinase [Clostridium saccharolyticum WM1] gi|302197718|gb|ADL05289.1| integral membrane sensor signal transduction histidine kinase [Clostridium saccharolyticum WM1] Length = 345 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 3/61 (4%) Query: 31 IENSLDAESS--RVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNI 87 ++N+LD + R+ + + DNG G+ E+I +R S+ S D I Sbjct: 246 VKNALDHTDTGGRIAIEWKKLPAVTQIIVRDNGSGIHPEDIHHIFKRFYRSRFSKDTQGI 305 Query: 88 H 88 Sbjct: 306 G 306 >gi|149189507|ref|ZP_01867791.1| hypothetical protein VSAK1_00757 [Vibrio shilonii AK1] gi|148836664|gb|EDL53617.1| hypothetical protein VSAK1_00757 [Vibrio shilonii AK1] Length = 657 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDA--ESS--RVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA S+ ++ I K+ + DNG G+ ++E+P Sbjct: 549 RLEQVLVNLVSNALDAVEGSAEPQLVVSIWSDTKTVSVSVQDNGKGIPADELPYLFDPFY 608 Query: 77 TSK 79 ++K Sbjct: 609 STK 611 >gi|328949382|ref|YP_004366719.1| DNA gyrase, B subunit [Treponema succinifaciens DSM 2489] gi|328449706|gb|AEB15422.1| DNA gyrase, B subunit [Treponema succinifaciens DSM 2489] Length = 641 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 15/63 (23%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EIPMAVQR 74 + E+++NS+D A +++ + ++ DNG G+ + + + + R Sbjct: 42 VYEVVDNSIDEAMAGYCTQITVALEKD--DICRVEDNGRGIPVDIHPTEHISALELVLTR 99 Query: 75 -HC 76 H Sbjct: 100 LHA 102 >gi|294507492|ref|YP_003571550.1| DNA gyrase subunit B [Salinibacter ruber M8] gi|294343820|emb|CBH24598.1| DNA gyrase subunit B [Salinibacter ruber M8] Length = 643 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 5/45 (11%) Query: 29 ELIENSLD-A--E-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 E+++N++D A +SR+E V+ G ++DNG G+ ++ P Sbjct: 41 EVVDNAVDEATNGYASRIEVVLHEDG-ESISVSDNGRGIPVDDHP 84 >gi|83815720|ref|YP_445608.1| type II DNA topoisomerase, B subunit [Salinibacter ruber DSM 13855] gi|83757114|gb|ABC45227.1| type II DNA topoisomerase, B subunit [Salinibacter ruber DSM 13855] Length = 643 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 5/45 (11%) Query: 29 ELIENSLD-A--E-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 E+++N++D A +SR+E V+ G ++DNG G+ ++ P Sbjct: 41 EVVDNAVDEATNGYASRIEVVLHEDG-ESISVSDNGRGIPVDDHP 84 >gi|253573903|ref|ZP_04851245.1| histidine kinase internal region [Paenibacillus sp. oral taxon 786 str. D14] gi|251846380|gb|EES74386.1| histidine kinase internal region [Paenibacillus sp. oral taxon 786 str. D14] Length = 590 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 12/70 (17%) Query: 18 EIIERPSI---AIKELIENSL-------DAESSRVETVIAGGG-KSFFQITDNGFGMTSE 66 E I R ++ L+ENS+ D ++ + + DNG G+ E Sbjct: 466 EEITRLYTIKLVLQPLVENSIYHGIKEKD-GHGLIKVKFRRKEDRLLITVIDNGCGIPPE 524 Query: 67 EIPMAVQRHC 76 E+ V+R Sbjct: 525 ELRQLVERLH 534 >gi|146321368|ref|YP_001201079.1| DNA gyrase B subunit [Streptococcus suis 98HAH33] gi|145692174|gb|ABP92679.1| DNA gyrase B subunit [Streptococcus suis 98HAH33] Length = 126 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + ++E I + + DNG G+ + Sbjct: 51 EIVDNSIDEALAGFADKIEVYIEPD--NSITVIDNGRGIPVD 90 >gi|218190712|gb|EEC73139.1| hypothetical protein OsI_07163 [Oryza sativa Indica Group] Length = 811 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 11/71 (15%) Query: 29 ELIENSLD--A-ESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++NSLD A ++ V + G + D+G GM +++ + + SK+ Sbjct: 151 ELLDNSLDEVANGATYVNIDMLENKKDGTRMVSVEDDGGGMDPDKMWHCMSLGYSAKSKV 210 Query: 81 SDDFSNIHTFG 91 D I +G Sbjct: 211 KD---TIGQYG 218 >gi|315127627|ref|YP_004069630.1| DNA topoisomerase IV subunit B [Pseudoalteromonas sp. SM9913] gi|315016141|gb|ADT69479.1| DNA topoisomerase IV subunit B [Pseudoalteromonas sp. SM9913] Length = 629 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 77/214 (35%), Gaps = 24/214 (11%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A ++R++ ++ + +++D+G GM EE + Sbjct: 32 RPNHLGQEVIDNSVDEAMAGHATRIDVILHED--NSLEVSDDGRGMPIDIHPEEGIPGVE 89 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAI-SGE 126 + + H K S+ + G G + + A+S + + R Sbjct: 90 LIFTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSTRVEVTVRRDAQQFRMAFEHGDKV 148 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 + +V T VR + ++ S + +++ A+ P + F Sbjct: 149 EDLNVIGSVGKRNTGTTVR-FWPDT----SYFDSANFSLTKLNHLLKAKAVLCPGLRIKF 203 Query: 187 STIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 K + + G + V G + + Sbjct: 204 -VNKQTKETQEWFYETGLKDYLVEAVKGYEILPK 236 >gi|313611863|gb|EFR86323.1| DNA gyrase subunit B [Listeria monocytogenes FSL F2-208] Length = 130 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A + +E I + + DNG G+ Sbjct: 52 EIVDNAIDEALAGFCTEIEITIEAD--NSITVRDNGRGIP 89 >gi|300865367|ref|ZP_07110178.1| DNA gyrase subunit B (fragment) [Oscillatoria sp. PCC 6506] gi|300336670|emb|CBN55328.1| DNA gyrase subunit B (fragment) [Oscillatoria sp. PCC 6506] Length = 410 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 60/185 (32%), Gaps = 35/185 (18%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 + E+++NS+D A + ++ I G +TD+G G+ S+ + + Sbjct: 38 VYEVVDNSIDEAMAGYCTHIQVDINADG--SVTVTDDGRGIPSDIVAKNGKSF------- 88 Query: 83 DFSNIHTFGFRGE----------------ALPSIGAVSH-LTLMSRPPQNNTGAQIAISG 125 + T RGE + I A+S L + + + Sbjct: 89 -VETVLTVLHRGEWCDRDSYKVSGGLHGVGIAVINALSEWLEVTVWRKEQIYTQRFERGI 147 Query: 126 EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFT 185 + ++ T V P F S + + N +R++A P ++ Sbjct: 148 PVTELIAKPSLENRTGTSVTFK----PDSQIFTTSIEFDYNTFAIHLRQIAYVNPGLTII 203 Query: 186 FSTIK 190 + Sbjct: 204 LTDNS 208 >gi|322434819|ref|YP_004217031.1| histidine kinase [Acidobacterium sp. MP5ACTX9] gi|321162546|gb|ADW68251.1| histidine kinase [Acidobacterium sp. MP5ACTX9] Length = 479 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 8/58 (13%) Query: 30 LIENSLDAESSRVETVIA-------GGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N++DA + G +I DNG G+ E P T+K Sbjct: 379 LIDNAIDASFEHGTVKVKTWAEPGADGQTELCIRIEDNGSGIPLESQPKVFDPFYTTK 436 >gi|269468716|gb|EEZ80341.1| Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [uncultured SUP05 cluster bacterium] Length = 627 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 ERP+ +E+I+NS+D A +S++ V+ G + D+G GM + Sbjct: 29 ERPNHLAQEVIDNSVDEAVAGHASKINVVLYKNG--SLSVEDDGRGMPVD 76 >gi|326800126|ref|YP_004317945.1| hypothetical protein Sph21_2728 [Sphingobacterium sp. 21] gi|326550890|gb|ADZ79275.1| hypothetical protein Sph21_2728 [Sphingobacterium sp. 21] Length = 677 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSF---FQITDNGFGMT 64 AI ELI N DA +S + V + QI DNG G+ Sbjct: 24 AICELIWNGFDANASLINIVFKPNNIDYINEIQIIDNGTGIP 65 >gi|315286766|ref|ZP_07872180.1| DNA gyrase subunit B [Listeria ivanovii FSL F6-596] gi|313630895|gb|EFR98587.1| DNA gyrase subunit B [Listeria ivanovii FSL F6-596] Length = 481 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A + +E I + + DNG G+ Sbjct: 52 EIVDNAIDEALAGFCTEIEITIEAD--NSITVRDNGRGIP 89 >gi|160871833|ref|ZP_02061965.1| DNA topoisomerase IV, B subunit [Rickettsiella grylli] gi|159120632|gb|EDP45970.1| DNA topoisomerase IV, B subunit [Rickettsiella grylli] Length = 630 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 82/239 (34%), Gaps = 34/239 (14%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + ++ V+ + +++D+G GM EE + Sbjct: 35 RPNHLAQEVIDNSVDEAIAGYARHIDVVLHVD--NSLEVSDDGRGMPVDVHPEEKVTGVE 92 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVSH---LTLMSRPPQNNTGAQIAISG 125 + + R H K + + G G + + A+SH +T+ ++ Q+ Sbjct: 93 LILTRLHAGGKFNHKNYR-FSGGLHGVGVSVVNALSHRLQVTI----RRDGFIYQMQFEQ 147 Query: 126 EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK--VS 183 S T L F P + + +E+ + + +R A+ P V Sbjct: 148 GNKKSNLKKIGKMETATSGTSLRF-WPDKR-YFDNEKFSVSRLKHSLRAKAVLCPGLTVR 205 Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQV-------IGEDFINNAVELNEKSNEITLQG 235 FT + + QV F E++ + G Sbjct: 206 FTDKQANKKDKWFYVDGVLSYLKDSLRQVERIPKEPFHGHFATEIEEVDWALCWLLESG 264 >gi|20807657|ref|NP_622828.1| sensory transduction histidine kinase [Thermoanaerobacter tengcongensis MB4] gi|20516203|gb|AAM24432.1| Sensory transduction histidine kinases [Thermoanaerobacter tengcongensis MB4] Length = 438 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 8/58 (13%) Query: 29 ELIENSLDA-----ESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTSKI 80 ELI+N+++A +E ++ G+ ++ DNG G+ + + + ++K Sbjct: 332 ELIQNAIEAIDKEIG--VIEVELSQDGEDVIFKVKDNGEGIKPKNLETIFEPGFSTKF 387 >gi|309799460|ref|ZP_07693694.1| DNA gyrase subunit B [Streptococcus infantis SK1302] gi|308116921|gb|EFO54363.1| DNA gyrase subunit B [Streptococcus infantis SK1302] Length = 207 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 21 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 60 >gi|307704602|ref|ZP_07641505.1| DNA gyrase subunit B [Streptococcus mitis SK597] gi|307621847|gb|EFO00881.1| DNA gyrase subunit B [Streptococcus mitis SK597] Length = 193 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|307706371|ref|ZP_07643183.1| DNA gyrase, B subunit [Streptococcus mitis SK321] gi|307618289|gb|EFN97444.1| DNA gyrase, B subunit [Streptococcus mitis SK321] Length = 648 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|306829208|ref|ZP_07462398.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus mitis ATCC 6249] gi|304428294|gb|EFM31384.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus mitis ATCC 6249] Length = 648 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|237820996|ref|ZP_04596841.1| DNA gyrase subunit B [Streptococcus pneumoniae CCRI 1974M2] Length = 444 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|168490903|ref|ZP_02715046.1| DNA gyrase, B subunit [Streptococcus pneumoniae CDC0288-04] gi|169833521|ref|YP_001694269.1| DNA gyrase subunit B [Streptococcus pneumoniae Hungary19A-6] gi|182683725|ref|YP_001835472.1| DNA gyrase subunit B [Streptococcus pneumoniae CGSP14] gi|221231606|ref|YP_002510758.1| DNA gyrase subunit B [Streptococcus pneumoniae ATCC 700669] gi|225854322|ref|YP_002735834.1| DNA gyrase subunit B [Streptococcus pneumoniae JJA] gi|225858616|ref|YP_002740126.1| DNA gyrase subunit B [Streptococcus pneumoniae 70585] gi|303255780|ref|ZP_07341821.1| DNA gyrase subunit B [Streptococcus pneumoniae BS455] gi|303260274|ref|ZP_07346245.1| DNA gyrase subunit B [Streptococcus pneumoniae SP-BS293] gi|303261480|ref|ZP_07347428.1| DNA gyrase subunit B [Streptococcus pneumoniae SP14-BS292] gi|303264148|ref|ZP_07350069.1| DNA gyrase subunit B [Streptococcus pneumoniae BS397] gi|303266242|ref|ZP_07352133.1| DNA gyrase subunit B [Streptococcus pneumoniae BS457] gi|303268680|ref|ZP_07354470.1| DNA gyrase subunit B [Streptococcus pneumoniae BS458] gi|1490397|emb|CAA91553.1| DNA gyrase [Streptococcus pneumoniae] gi|73916244|gb|AAZ92990.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916262|gb|AAZ92999.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916276|gb|AAZ93006.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916288|gb|AAZ93012.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916298|gb|AAZ93017.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916300|gb|AAZ93018.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916302|gb|AAZ93019.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916304|gb|AAZ93020.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916306|gb|AAZ93021.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916308|gb|AAZ93022.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916310|gb|AAZ93023.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916312|gb|AAZ93024.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916314|gb|AAZ93025.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916316|gb|AAZ93026.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916320|gb|AAZ93028.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916326|gb|AAZ93031.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916330|gb|AAZ93033.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916332|gb|AAZ93034.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916334|gb|AAZ93035.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916338|gb|AAZ93037.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916340|gb|AAZ93038.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916342|gb|AAZ93039.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916350|gb|AAZ93043.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|168996023|gb|ACA36635.1| DNA gyrase, B subunit [Streptococcus pneumoniae Hungary19A-6] gi|182629059|gb|ACB90007.1| DNA gyrase subunit B [Streptococcus pneumoniae CGSP14] gi|183574700|gb|EDT95228.1| DNA gyrase, B subunit [Streptococcus pneumoniae CDC0288-04] gi|220674066|emb|CAR68579.1| DNA gyrase subunit B [Streptococcus pneumoniae ATCC 700669] gi|225721919|gb|ACO17773.1| DNA gyrase, B subunit [Streptococcus pneumoniae 70585] gi|225722735|gb|ACO18588.1| DNA gyrase, B subunit [Streptococcus pneumoniae JJA] gi|301801650|emb|CBW34348.1| DNA gyrase subunit B [Streptococcus pneumoniae INV200] gi|302597164|gb|EFL64269.1| DNA gyrase subunit B [Streptococcus pneumoniae BS455] gi|302637614|gb|EFL68101.1| DNA gyrase subunit B [Streptococcus pneumoniae SP14-BS292] gi|302638598|gb|EFL69062.1| DNA gyrase subunit B [Streptococcus pneumoniae SP-BS293] gi|302641740|gb|EFL72097.1| DNA gyrase subunit B [Streptococcus pneumoniae BS458] gi|302644172|gb|EFL74428.1| DNA gyrase subunit B [Streptococcus pneumoniae BS457] gi|302646553|gb|EFL76779.1| DNA gyrase subunit B [Streptococcus pneumoniae BS397] gi|327390163|gb|EGE88506.1| DNA gyrase, B subunit [Streptococcus pneumoniae GA04375] gi|332076087|gb|EGI86553.1| DNA gyrase, B subunit [Streptococcus pneumoniae GA41301] gi|332202670|gb|EGJ16739.1| DNA gyrase, B subunit [Streptococcus pneumoniae GA41317] Length = 648 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|73916248|gb|AAZ92992.1| DNA gyrase subunit B [Streptococcus pneumoniae] Length = 648 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|73916264|gb|AAZ93000.1| DNA gyrase subunit B [Streptococcus pneumoniae] Length = 648 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|148992476|ref|ZP_01822171.1| DNA gyrase subunit B [Streptococcus pneumoniae SP9-BS68] gi|149021676|ref|ZP_01835707.1| DNA gyrase subunit B [Streptococcus pneumoniae SP23-BS72] gi|168489810|ref|ZP_02714009.1| DNA gyrase, B subunit [Streptococcus pneumoniae SP195] gi|237649436|ref|ZP_04523688.1| DNA gyrase subunit B [Streptococcus pneumoniae CCRI 1974] gi|307127642|ref|YP_003879673.1| DNA gyrase subunit B [Streptococcus pneumoniae 670-6B] gi|73916238|gb|AAZ92987.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916272|gb|AAZ93004.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916274|gb|AAZ93005.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916292|gb|AAZ93014.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916324|gb|AAZ93030.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|147928793|gb|EDK79806.1| DNA gyrase subunit B [Streptococcus pneumoniae SP9-BS68] gi|147930137|gb|EDK81123.1| DNA gyrase subunit B [Streptococcus pneumoniae SP23-BS72] gi|183571773|gb|EDT92301.1| DNA gyrase, B subunit [Streptococcus pneumoniae SP195] gi|301793963|emb|CBW36359.1| DNA gyrase subunit B [Streptococcus pneumoniae INV104] gi|306484704|gb|ADM91573.1| DNA gyrase, B subunit [Streptococcus pneumoniae 670-6B] gi|332073065|gb|EGI83544.1| DNA gyrase, B subunit [Streptococcus pneumoniae GA17570] gi|332204817|gb|EGJ18882.1| DNA gyrase, B subunit [Streptococcus pneumoniae GA47901] Length = 648 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|73916266|gb|AAZ93001.1| DNA gyrase subunit B [Streptococcus pneumoniae] Length = 648 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|148997114|ref|ZP_01824768.1| DNA gyrase, B subunit [Streptococcus pneumoniae SP11-BS70] gi|168492965|ref|ZP_02717108.1| DNA gyrase, B subunit [Streptococcus pneumoniae CDC3059-06] gi|168575469|ref|ZP_02721405.1| DNA gyrase, B subunit [Streptococcus pneumoniae MLV-016] gi|194396954|ref|YP_002037451.1| DNA gyrase subunit B [Streptococcus pneumoniae G54] gi|307067411|ref|YP_003876377.1| type IIA topoisomerase subunit B [Streptococcus pneumoniae AP200] gi|73916242|gb|AAZ92989.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916254|gb|AAZ92995.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916268|gb|AAZ93002.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|147756814|gb|EDK63854.1| DNA gyrase, B subunit [Streptococcus pneumoniae SP11-BS70] gi|183577070|gb|EDT97598.1| DNA gyrase, B subunit [Streptococcus pneumoniae CDC3059-06] gi|183578470|gb|EDT98998.1| DNA gyrase, B subunit [Streptococcus pneumoniae MLV-016] gi|194356621|gb|ACF55069.1| DNA gyrase, B subunit [Streptococcus pneumoniae G54] gi|306408948|gb|ADM84375.1| Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Streptococcus pneumoniae AP200] Length = 648 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|148985841|ref|ZP_01818935.1| DNA gyrase, B subunit [Streptococcus pneumoniae SP3-BS71] gi|73916286|gb|AAZ93011.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916318|gb|AAZ93027.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916322|gb|AAZ93029.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916344|gb|AAZ93040.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|147921987|gb|EDK73111.1| DNA gyrase, B subunit [Streptococcus pneumoniae SP3-BS71] gi|301799821|emb|CBW32390.1| DNA gyrase subunit B [Streptococcus pneumoniae OXC141] Length = 648 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|168484465|ref|ZP_02709417.1| DNA gyrase, B subunit [Streptococcus pneumoniae CDC1873-00] gi|73916352|gb|AAZ93044.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|172042299|gb|EDT50345.1| DNA gyrase, B subunit [Streptococcus pneumoniae CDC1873-00] gi|332203962|gb|EGJ18029.1| DNA gyrase, B subunit [Streptococcus pneumoniae GA47368] Length = 648 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|73916260|gb|AAZ92998.1| DNA gyrase subunit B [Streptococcus pneumoniae] Length = 648 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|73916252|gb|AAZ92994.1| DNA gyrase subunit B [Streptococcus pneumoniae] Length = 648 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|73916278|gb|AAZ93007.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916280|gb|AAZ93008.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916282|gb|AAZ93009.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916284|gb|AAZ93010.1| DNA gyrase subunit B [Streptococcus pneumoniae] Length = 648 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|225861290|ref|YP_002742799.1| DNA gyrase subunit B [Streptococcus pneumoniae Taiwan19F-14] gi|298255372|ref|ZP_06978958.1| DNA gyrase subunit B [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503188|ref|YP_003725128.1| DNA topoisomerase [Streptococcus pneumoniae TCH8431/19A] gi|73916290|gb|AAZ93013.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916294|gb|AAZ93015.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916296|gb|AAZ93016.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|225727003|gb|ACO22854.1| DNA gyrase, B subunit [Streptococcus pneumoniae Taiwan19F-14] gi|298238783|gb|ADI69914.1| DNA topoisomerase (ATP-hydrolyzing) [Streptococcus pneumoniae TCH8431/19A] Length = 648 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|15900699|ref|NP_345303.1| DNA gyrase subunit B [Streptococcus pneumoniae TIGR4] gi|15902759|ref|NP_358309.1| DNA gyrase subunit B [Streptococcus pneumoniae R6] gi|111658143|ref|ZP_01408840.1| hypothetical protein SpneT_02000668 [Streptococcus pneumoniae TIGR4] gi|116516156|ref|YP_816203.1| DNA gyrase subunit B [Streptococcus pneumoniae D39] gi|149007692|ref|ZP_01831309.1| DNA gyrase subunit B [Streptococcus pneumoniae SP18-BS74] gi|168486180|ref|ZP_02710688.1| DNA gyrase, B subunit [Streptococcus pneumoniae CDC1087-00] gi|225856480|ref|YP_002737991.1| DNA gyrase subunit B [Streptococcus pneumoniae P1031] gi|61225463|sp|P0A4L9|GYRB_STRPN RecName: Full=DNA gyrase subunit B gi|61225464|sp|P0A4M0|GYRB_STRR6 RecName: Full=DNA gyrase subunit B gi|14972283|gb|AAK74943.1| DNA gyrase subunit B [Streptococcus pneumoniae TIGR4] gi|15458306|gb|AAK99519.1| DNA gyrase [Streptococcus pneumoniae R6] gi|73916240|gb|AAZ92988.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916246|gb|AAZ92991.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916250|gb|AAZ92993.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916256|gb|AAZ92996.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916258|gb|AAZ92997.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916270|gb|AAZ93003.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916328|gb|AAZ93032.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916336|gb|AAZ93036.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916346|gb|AAZ93041.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|73916348|gb|AAZ93042.1| DNA gyrase subunit B [Streptococcus pneumoniae] gi|116076732|gb|ABJ54452.1| DNA gyrase, B subunit [Streptococcus pneumoniae D39] gi|147760847|gb|EDK67818.1| DNA gyrase subunit B [Streptococcus pneumoniae SP18-BS74] gi|183570816|gb|EDT91344.1| DNA gyrase, B subunit [Streptococcus pneumoniae CDC1087-00] gi|225726173|gb|ACO22025.1| DNA gyrase, B subunit [Streptococcus pneumoniae P1031] Length = 648 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|115525255|ref|YP_782166.1| hypothetical protein RPE_3252 [Rhodopseudomonas palustris BisA53] gi|115519202|gb|ABJ07186.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 492 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 7/110 (6%) Query: 22 RPSIAIKELIENSLDAESSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCTS-K 79 A+ +LI+NS+ AE++ V+ V + I DNG GM+ E+ A++ S K Sbjct: 24 SLETAVADLIDNSISAEATTVDIVCEIAVAVPYLAILDNGRGMSRTELIDAMKHGSASPK 83 Query: 80 ISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEK 127 H G G L S LT++S + +GA+ + Sbjct: 84 TK---RGTHDLGRFGLGLKTASFSQCRSLTVVSLKKGDLSGAEWNLDRID 130 >gi|325674790|ref|ZP_08154477.1| sensor histidine kinase [Rhodococcus equi ATCC 33707] gi|325554376|gb|EGD24051.1| sensor histidine kinase [Rhodococcus equi ATCC 33707] Length = 545 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 16/99 (16%) Query: 23 PSIAIKELIENSLDA-----ESS-RVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 + L++N++DA ++ VE + ++ D+G GM + + A R Sbjct: 423 LVTVVGNLVDNAIDAARSEGDARPWVEVTVTEEDSMLVIRVADSGPGMDPDALAQATTRG 482 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQ 114 ++K D RG L + +++R Sbjct: 483 YSTKPVDGRPARQ----RGLGLALVAQ-----IVTRHGG 512 >gi|281491407|ref|YP_003353387.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis KF147] gi|281375141|gb|ADA64657.1| DNA gyrase, subunit B [Lactococcus lactis subsp. lactis KF147] Length = 651 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIEVFIEPD--NSITVVDDGRGIPVD 90 >gi|15672887|ref|NP_267061.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis Il1403] gi|12723837|gb|AAK05003.1|AE006324_6 DNA gyrase subunit B [Lactococcus lactis subsp. lactis Il1403] gi|326406451|gb|ADZ63522.1| DNA gyrase subunit B [Lactococcus lactis subsp. lactis CV56] Length = 651 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIEVFIEPD--NSITVVDDGRGIPVD 90 >gi|226942174|ref|YP_002797247.1| DNA gyrase subunit B [Azotobacter vinelandii DJ] gi|226717101|gb|ACO76272.1| DNA gyrase protein, subunit B [Azotobacter vinelandii DJ] Length = 806 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 76/246 (30%), Gaps = 23/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + + I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGYCNEISITIHTD--ESITVRDNGRGIPVDLHKEEGISAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S +++ Q + G + + V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEELVLTIRRDGKVWEQTYVHGVPQAPLATVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 GT +V + +++ +R ++ V +S + + Sbjct: 161 DTDGTGTQVH-----FKPSAETFHNIHFSWDILAKRLRELSFLNSGVGIVLKDERSGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + + V E G +N G F N Sbjct: 216 LFKY--EGGLKAFVDYLNTNKNAVSQVFHFNVQREEDGVGVEVALQWNDGFNENILCFTN 273 Query: 256 GRTVQD 261 +D Sbjct: 274 NIPQRD 279 >gi|116511733|ref|YP_808949.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris SK11] gi|125624430|ref|YP_001032913.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris MG1363] gi|116107387|gb|ABJ72527.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris SK11] gi|124493238|emb|CAL98205.1| topoisomerase IV subunit B [Lactococcus lactis subsp. cremoris MG1363] gi|300071217|gb|ADJ60617.1| DNA gyrase subunit B [Lactococcus lactis subsp. cremoris NZ9000] Length = 651 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S +E I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIEVFIEPD--NSITVVDDGRGIPVD 90 >gi|88706070|ref|ZP_01103778.1| conserved hypothetical protein [Congregibacter litoralis KT71] gi|88699784|gb|EAQ96895.1| conserved hypothetical protein [Congregibacter litoralis KT71] Length = 383 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 3/42 (7%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEE 67 + ELI N+ DA+++ V I+ + ++ D+G GM+ E Sbjct: 28 VLAELIANAYDADANNVYI-ISN--RDDIRVEDDGHGMSYEN 66 >gi|313143631|ref|ZP_07805824.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313128662|gb|EFR46279.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 594 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 15/78 (19%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKS-------- 52 MKI ++++Q+ + I ELI N++ A ++ +E I Sbjct: 7 MKINI--PEVVDQLKN----VKLENVIFELIVNAMQANATYIEFKIIASSLDNKNITPYV 60 Query: 53 -FFQITDNGFGMTSEEIP 69 ++ DNG G + + Sbjct: 61 DKIEVIDNGDGFNEDNLK 78 >gi|224437166|ref|ZP_03658147.1| ATPase, putative [Helicobacter cinaedi CCUG 18818] Length = 588 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 15/78 (19%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKS-------- 52 MKI ++++Q+ + I ELI N++ A ++ +E I Sbjct: 1 MKINI--PEVVDQLKN----VKLENVIFELIVNAMQANATYIEFKIIASSLDNKNITPYV 54 Query: 53 -FFQITDNGFGMTSEEIP 69 ++ DNG G + + Sbjct: 55 DKIEVIDNGDGFNEDNLK 72 >gi|171321610|ref|ZP_02910539.1| integral membrane sensor signal transduction histidine kinase [Burkholderia ambifaria MEX-5] gi|171093109|gb|EDT38328.1| integral membrane sensor signal transduction histidine kinase [Burkholderia ambifaria MEX-5] Length = 672 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 20/91 (21%) Query: 22 RPSIAIKELIENSLDA--E--SSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + +E IA + ++ DNG G+ + +P + Sbjct: 552 RLEQVLINLLGNALDAVAGVPAPAIEVTIAVSAATLAVEVRDNGPGIAPDLLPRLFEPFF 611 Query: 77 TSKISDDFSNIHTFGFRGEAL-----PSIGA 102 T+K G RG L SI + Sbjct: 612 TTK---------EMG-RGLGLGLAISSSIAS 632 >gi|85708623|ref|ZP_01039689.1| topoisomerase B subunit [Erythrobacter sp. NAP1] gi|85690157|gb|EAQ30160.1| topoisomerase B subunit [Erythrobacter sp. NAP1] Length = 662 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 6/46 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 E+++NS+D A +SR+E + G + I+DNG G+ +E P Sbjct: 52 EVLDNSMDEAVAGHASRIEVRLEEG--NRLSISDNGRGIPVDEHPK 95 >gi|317495092|ref|ZP_07953463.1| DNA gyrase, subunit B [Gemella moribillum M424] gi|316914799|gb|EFV36274.1| DNA gyrase, subunit B [Gemella moribillum M424] Length = 643 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I ++ ++ DNG G+ + Sbjct: 51 EIVDNSIDEALAGYCNTITVAIEKD--NWIRVEDNGRGIPID 90 >gi|262164768|ref|ZP_06032506.1| signal transduction histidine kinase [Vibrio mimicus VM223] gi|262027148|gb|EEY45815.1| signal transduction histidine kinase [Vibrio mimicus VM223] Length = 684 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 21 ERPSIAIKELIENSLDA-ESS-----RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 +R + L+ N+LDA + + V +++DNG G+ E + + Sbjct: 577 QRLRQVLGNLVSNALDAMGKTPEPKLSISAVSEEHQV-IVRVSDNGCGIAPELLTTLFEP 635 Query: 75 HCTSK 79 TSK Sbjct: 636 FQTSK 640 >gi|71894694|ref|YP_278802.1| DNA gyrase subunit B [Mycoplasma synoviae 53] gi|71851482|gb|AAZ44091.1| DNA gyrase subunit B [Mycoplasma synoviae 53] Length = 650 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 16/73 (21%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT-------SEEIPMAVQ-RH 75 E+++NS+D A + ++ I GG S + DNG G+ + + H Sbjct: 49 EIVDNSVDEVLAGYADNIKITITKDGGVS---VEDNGRGIPVDMHSKGKSALEIVFTGLH 105 Query: 76 CTSKISDDFSNIH 88 K D + Sbjct: 106 AGGKFKSDAYKVS 118 >gi|332879043|ref|ZP_08446752.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682992|gb|EGJ55880.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 402 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Query: 26 AIKELIENSLDA--ESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 I+ L +N++DA + GK ++TD G G++ T+K Sbjct: 303 VIENLCKNAIDAMGGQGCITVTAFEDAGKVVVEVTDTGKGISKNHFQTVFSPGFTTK 359 >gi|330997753|ref|ZP_08321592.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Paraprevotella xylaniphila YIT 11841] gi|329569852|gb|EGG51610.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Paraprevotella xylaniphila YIT 11841] Length = 392 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Query: 26 AIKELIENSLDA--ESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 I+ L +N++DA + GK ++TD G G++ T+K Sbjct: 293 VIENLCKNAIDAMGGQGCITVTAFEDAGKVVVEVTDTGKGISKNHFQTVFSPGFTTK 349 >gi|297739950|emb|CBI30132.3| unnamed protein product [Vitis vinifera] Length = 707 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 86/248 (34%), Gaps = 23/248 (9%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT--------SEEIPMAVQ- 73 + E+++N++D A +S+V+ V+ ITDNG G+ + + Sbjct: 100 VYEILDNAIDEAQAGFASKVDVVLLAD--DSVSITDNGRGIPTELHPVTKKSSLETVLTV 157 Query: 74 RHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISS 130 H K + ++ + G G L + A+S L + + + S Sbjct: 158 LHAGGKFGGASSGYSV-SGGLHGVGLSVVNALSEALEVTVWRDGMEYQQKYSRGKPVTSL 216 Query: 131 VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 V T ++ + F P + F Q + N I IR +A P+++ T Sbjct: 217 THRVLPTESTDLQGTHIRF-WPDKEVFTTEIQFDYNTIAGRIRELAFLNPELAITLRKED 275 Query: 191 SN--RYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNAN 248 + + + N G E + + + + V K + + + + ++ Sbjct: 276 KDPEKNQYNEYCYAGGLVEYVRWLNTDKKPVHDVVGFRKVAD-GISIDVALQWCSDAYSD 334 Query: 249 QFYVFING 256 + N Sbjct: 335 TMLGYANS 342 >gi|225441215|ref|XP_002266668.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 719 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 86/248 (34%), Gaps = 23/248 (9%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT--------SEEIPMAVQ- 73 + E+++N++D A +S+V+ V+ ITDNG G+ + + Sbjct: 112 VYEILDNAIDEAQAGFASKVDVVLLAD--DSVSITDNGRGIPTELHPVTKKSSLETVLTV 169 Query: 74 RHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISS 130 H K + ++ + G G L + A+S L + + + S Sbjct: 170 LHAGGKFGGASSGYSV-SGGLHGVGLSVVNALSEALEVTVWRDGMEYQQKYSRGKPVTSL 228 Query: 131 VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 V T ++ + F P + F Q + N I IR +A P+++ T Sbjct: 229 THRVLPTESTDLQGTHIRF-WPDKEVFTTEIQFDYNTIAGRIRELAFLNPELAITLRKED 287 Query: 191 SN--RYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNAN 248 + + + N G E + + + + V K + + + + ++ Sbjct: 288 KDPEKNQYNEYCYAGGLVEYVRWLNTDKKPVHDVVGFRKVAD-GISIDVALQWCSDAYSD 346 Query: 249 QFYVFING 256 + N Sbjct: 347 TMLGYANS 354 >gi|119713347|gb|ABL97411.1| DNA topoisomerase IV subunit B [uncultured marine bacterium EB80_02D08] Length = 631 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 15/75 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP-------- 69 P+ I+E+++NS+D + S ++ + G F +++D+G GM +E P Sbjct: 32 NPNHLIQEVLDNSVDEALSGYCSNIKVSVMKDG--FIKVSDDGRGMPIDEHPEHKVSGVE 89 Query: 70 -MAVQRHCTSKISDD 83 + + H +K S D Sbjct: 90 LILCKLHAGAKFSGD 104 >gi|297734460|emb|CBI15707.3| unnamed protein product [Vitis vinifera] Length = 830 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 11/71 (15%) Query: 29 ELIENSLDA---ESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++NSLD ++ V + G I DNG GM E++ + + SKI Sbjct: 177 ELLDNSLDEICNGATYVNVDMLENKKDGNRMLLIEDNGGGMDPEKMRQCMSLGYSAKSKI 236 Query: 81 SDDFSNIHTFG 91 ++ I +G Sbjct: 237 AN---TIGQYG 244 >gi|170702728|ref|ZP_02893588.1| integral membrane sensor signal transduction histidine kinase [Burkholderia ambifaria IOP40-10] gi|170132363|gb|EDT00831.1| integral membrane sensor signal transduction histidine kinase [Burkholderia ambifaria IOP40-10] Length = 672 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 20/91 (21%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + +E IA + ++ DNG G+ + +P + Sbjct: 552 RLEQVLINLLGNALDAVAGVAAPAIEVTIAVSVATLAVEVRDNGPGIAPDLLPRLFEPFF 611 Query: 77 TSKISDDFSNIHTFGFRGEAL-----PSIGA 102 T+K G RG L SI + Sbjct: 612 TTK---------EMG-RGLGLGLAISSSIAS 632 >gi|108759974|ref|YP_633853.1| response regulator/putative sensor histidine kinase [Myxococcus xanthus DK 1622] gi|108463854|gb|ABF89039.1| response regulator/putative sensor histidine kinase [Myxococcus xanthus DK 1622] Length = 399 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 22/93 (23%) Query: 5 KLSEKIINQIAAGEIIER---PSIAIKELIENSLDA------ESSRVETVIA------GG 49 +L ++ I ++ + EL+ N++DA R+ + Sbjct: 270 QLPDEAIA------VVFNRRQLEQVLVELLANAVDAVEDVTDRPRRIHVGVELPDIFGDF 323 Query: 50 GKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 G + + D G G+ +E+ + + T+K + Sbjct: 324 GPRLY-VKDTGIGIFEDELQAVFEPYYTTKAPE 355 >gi|115352978|ref|YP_774817.1| periplasmic sensor signal transduction histidine kinase [Burkholderia ambifaria AMMD] gi|115282966|gb|ABI88483.1| periplasmic sensor signal transduction histidine kinase [Burkholderia ambifaria AMMD] Length = 672 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 20/91 (21%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + +E IA + ++ DNG G+ + +P + Sbjct: 552 RLEQVLINLLGNALDAVAGVAAPAIEVTIAVSVATLAVEVRDNGPGIAPDLLPRLFEPFF 611 Query: 77 TSKISDDFSNIHTFGFRGEAL-----PSIGA 102 T+K G RG L SI + Sbjct: 612 TTK---------EMG-RGLGLGLAISSSIAS 632 >gi|332654825|ref|ZP_08420567.1| DNA gyrase, B subunit [Ruminococcaceae bacterium D16] gi|332516168|gb|EGJ45776.1| DNA gyrase, B subunit [Ruminococcaceae bacterium D16] Length = 650 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + + I G + +TDNG G+ + Sbjct: 53 VYEIVDNSIDEALAGYCTDITVTINPG--NTITVTDNGRGIPVD 94 >gi|291240309|ref|XP_002740062.1| PREDICTED: MORC-like, partial [Saccoglossus kowalevskii] Length = 654 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 60/174 (34%), Gaps = 27/174 (15%) Query: 29 ELIENSLDAESSRVETVIAGG----GKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDF 84 EL++N+ DA +SR+E G D+G GM + + +SK Sbjct: 33 ELLDNARDAGASRIEVDTVLNDEVQGGYLIYFLDDGEGMDPGDTASIITFGKSSK----- 87 Query: 85 SNIHT--FGFRGEALPS----IGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNP 138 IH+ G G L S IG + L ++ + I+ + + ++ Sbjct: 88 RAIHSNMIGQYGNGLKSGSMRIGK--DMILFTKKDDTKSCLFISRTFHEDKNIEE----- 140 Query: 139 GTIVEVRDLFFTIPARLNFLKSEQVETNL--ITDVIRRMAIAYPKVSFTFSTIK 190 V V F LK+ T ++I + + + + F K Sbjct: 141 ---VIVPIPSFNGRTNQPLLKNGADITKHEQEMELILKYSPFHSEKDFMAQFDK 191 >gi|288929798|ref|ZP_06423641.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 317 str. F0108] gi|288328899|gb|EFC67487.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 317 str. F0108] Length = 657 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 6/49 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 + E ++NS+D A S +E I + + D+G G+ +E Sbjct: 45 VNETVDNSIDEAMAGYCSNIEVTINED--NSITVQDDGRGIPVDEHEKL 91 >gi|331703509|ref|YP_004400196.1| Topoisomerase IV subunit B [Mycoplasma mycoides subsp. capri LC str. 95010] gi|256384465|gb|ACU79035.1| DNA topoisomerase IV, B subunit [Mycoplasma mycoides subsp. capri str. GM12] gi|256385298|gb|ACU79867.1| DNA topoisomerase IV, B subunit [Mycoplasma mycoides subsp. capri str. GM12] gi|296455442|gb|ADH21677.1| DNA topoisomerase IV, B subunit [synthetic Mycoplasma mycoides JCVI-syn1.0] gi|328802064|emb|CBW54218.1| Topoisomerase IV subunit B [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 643 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 22/40 (55%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A ++++ ++ + + DNG G+ Sbjct: 43 EIVDNAIDEALAGYCTQIDVILEKD--NSITVIDNGRGIP 80 >gi|196234231|ref|ZP_03133062.1| histidine kinase [Chthoniobacter flavus Ellin428] gi|196221690|gb|EDY16229.1| histidine kinase [Chthoniobacter flavus Ellin428] Length = 562 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 5/58 (8%) Query: 30 LIENSLDAESSR--VETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSKISDDF 84 LI NS+DA R + G+ + D+G GM+ E ++ ++K +D Sbjct: 332 LIFNSIDAIPKRGTITIETETQGRWLAITVKDDGLGMSEEVKARCLEPFYSTK--EDL 387 >gi|83319442|ref|YP_424431.1| DNA topoisomerase IV, B subunit [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|90110022|sp|P50028|GYRB_MYCCT RecName: Full=DNA gyrase subunit B gi|83283328|gb|ABC01260.1| DNA topoisomerase IV, B subunit [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 643 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 22/40 (55%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A ++++ ++ + + DNG G+ Sbjct: 43 EIVDNAIDEALAGYCTQIDVILEKD--NSITVIDNGRGIP 80 >gi|938029|dbj|BAA05969.1| DNA gyrase subunit B [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 104 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 22/40 (55%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A ++++ ++ + + DNG G+ Sbjct: 43 EIVDNAIDEALAGYCTQIDVILEKD--NSITVIDNGRGIP 80 >gi|315607416|ref|ZP_07882412.1| sensor histidine kinase [Prevotella buccae ATCC 33574] gi|315250848|gb|EFU30841.1| sensor histidine kinase [Prevotella buccae ATCC 33574] Length = 398 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 15/67 (22%) Query: 19 IIERPSIAIKELIENSLDA-----ESSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAV 72 +IE + +N++DA V + G K+ +++D G G+ +++ Sbjct: 297 VIENLA-------KNAIDAMGGVPG--TVTLRVEDAGEKAVIEVSDTGRGIRRKDVGNVF 347 Query: 73 QRHCTSK 79 + T+K Sbjct: 348 RPGFTTK 354 >gi|284931406|gb|ADC31344.1| DNA topoisomerase IV subunit B [Mycoplasma gallisepticum str. F] Length = 633 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 35/241 (14%), Positives = 73/241 (30%), Gaps = 23/241 (9%) Query: 29 ELIENSLD-A---ESSRVETVIAGGGKSFFQITDNGFGMT-----SEEIPMA----VQRH 75 EL +N++D A ++++E V G +TDNG G+ + + H Sbjct: 41 ELFDNAVDEALNGSANKIEVVHKKDG--SIIVTDNGRGIPVGKNLATNLSTVDTVYTVLH 98 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D + + G G + A+S +++ I G KI Sbjct: 99 AGGKFDDQAYKV-SGGLHGVGASVVNALSRKLIVNVHRDGGMYESIYQDGGKIIQPLKKM 157 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + + + K+ Q +I + + + + + F + Sbjct: 158 GSSTKHGTIIQFW----PDPTIFKNIQFNPYMIKERLHESSFLFKGLKIVFVDENNPELS 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 F + +G + I+ + +I + G + + F N Sbjct: 214 QTFIAKDGILEYLKYVNENKKTISKIIPFKGDYEKIVVDGCF---QYTDNESELIISFAN 270 Query: 256 G 256 Sbjct: 271 S 271 >gi|262283011|ref|ZP_06060778.1| DNA gyrase subunit B [Streptococcus sp. 2_1_36FAA] gi|262261263|gb|EEY79962.1| DNA gyrase subunit B [Streptococcus sp. 2_1_36FAA] Length = 649 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 50 EIVDNSIDEALAGFASHIQVFIEKD--NSITVVDDGRGIPVD 89 >gi|226366067|ref|YP_002783850.1| two-component histidine kinase [Rhodococcus opacus B4] gi|226244557|dbj|BAH54905.1| putative two-component histidine kinase [Rhodococcus opacus B4] Length = 538 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 34/123 (27%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLD-------AESSRVETVI-AGGGKSFFQ 55 L ++ A ++I + LI+N++D A R+ I G + Sbjct: 423 HALDPEL-----ATDVIT----VLGNLIDNAVDVSEGGRDA---RISIRITDDDGI-LIE 469 Query: 56 ITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN 115 ++D+G G+ R TSK T G RG L + L+S Sbjct: 470 VSDSGPGVPEPMREEIFSRGVTSK-------PGTPGGRGIGLA------LVRLVSSQHGG 516 Query: 116 NTG 118 + Sbjct: 517 SAA 519 >gi|226303498|ref|YP_002763456.1| DNA gyrase subunit B [Rhodococcus erythropolis PR4] gi|229491178|ref|ZP_04385006.1| DNA gyrase, B subunit [Rhodococcus erythropolis SK121] gi|226182613|dbj|BAH30717.1| DNA gyrase subunit B [Rhodococcus erythropolis PR4] gi|229321916|gb|EEN87709.1| DNA gyrase, B subunit [Rhodococcus erythropolis SK121] Length = 678 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 8/41 (19%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 E+++NS+D A +++VE + GG ++ D+G G+ Sbjct: 51 EVVDNSVDEAMAGHATKVEVTLLEDGG---IRVIDDGRGIP 88 >gi|157151219|ref|YP_001450712.1| DNA gyrase subunit B [Streptococcus gordonii str. Challis substr. CH1] gi|157076013|gb|ABV10696.1| DNA gyrase, B subunit [Streptococcus gordonii str. Challis substr. CH1] Length = 649 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 50 EIVDNSIDEALAGFASHIQVFIEKD--NSITVVDDGRGIPVD 89 >gi|118602571|ref|YP_903786.1| DNA topoisomerase IV subunit B [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567510|gb|ABL02315.1| DNA topoisomerase IV subunit B [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 627 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 ERP+ +E+I+NS+D A +S++ ++ G + DNG GM + Sbjct: 29 ERPNHLAQEVIDNSVDETIAGYASKISVILYKDG--SLSVEDNGRGMPVD 76 >gi|330500918|ref|YP_004377787.1| DNA gyrase subunit B [Pseudomonas mendocina NK-01] gi|328915204|gb|AEB56035.1| DNA gyrase subunit B [Pseudomonas mendocina NK-01] Length = 806 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 76/246 (30%), Gaps = 23/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A S + I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGYCSEITITIHPD--ESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S +++ Q + G + + V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSKELVLTIRRSGKIWEQTYVHGVPQAPLTAVG 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 GT ++ + +++ +R ++ V ++ + + Sbjct: 161 DTDGTGTQIH-----FKPSEETFANIHFSWDILAKRLRELSFLNSGVGILLRDERTGKEE 215 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + + N V E G +N F N Sbjct: 216 LFKY--EGGLKAFVEFLNTNKTVVNQVFHFNIQREEDGVGVEVALQWNDSFNENILCFTN 273 Query: 256 GRTVQD 261 +D Sbjct: 274 NIPQRD 279 >gi|320104795|ref|YP_004180386.1| DNA topoisomerase IV subunit B [Isosphaera pallida ATCC 43644] gi|319752077|gb|ADV63837.1| DNA topoisomerase IV subunit B [Isosphaera pallida ATCC 43644] Length = 652 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 24/42 (57%), Gaps = 5/42 (11%) Query: 29 ELIENSLD----AESSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N++D +SR+ + G++ ++DNG G+ + Sbjct: 54 EIVDNAIDEVMNGHASRIVVELEADGRTL-SVSDNGRGIPVD 94 >gi|86359113|ref|YP_471005.1| putative chemotaxis two-component sensor histidine kinase protein [Rhizobium etli CFN 42] gi|86283215|gb|ABC92278.1| putative chemotaxis two-component sensor histidine kinase protein [Rhizobium etli CFN 42] Length = 683 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 15/64 (23%) Query: 18 EIIERPSIAIKELIENSLD--------------AESSRVETVIAG-GGKSFFQITDNGFG 62 +IER + + L+ NS+D A++ + GG+ I D+G G Sbjct: 395 TVIERLADPLVHLVRNSIDHGLEVPADRLAAGKAKAGTITLSARQAGGEVIISIKDDGRG 454 Query: 63 MTSE 66 + E Sbjct: 455 INRE 458 >gi|20807372|ref|NP_622543.1| sensory transduction histidine kinase [Thermoanaerobacter tengcongensis MB4] gi|254478311|ref|ZP_05091691.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Carboxydibrachium pacificum DSM 12653] gi|20515891|gb|AAM24147.1| Sensory transduction histidine kinases [Thermoanaerobacter tengcongensis MB4] gi|214035776|gb|EEB76470.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Carboxydibrachium pacificum DSM 12653] Length = 182 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 3/51 (5%) Query: 30 LIENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCT 77 L +NS+ A + VE I + + D+G GM E + T Sbjct: 11 LAQNSVRAGAKNVEIEIEENPQEDLLTVYVKDDGCGMKKEFLEKVTSPFVT 61 >gi|320095115|ref|ZP_08026824.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Actinomyces sp. oral taxon 178 str. F0338] gi|319977982|gb|EFW09616.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Actinomyces sp. oral taxon 178 str. F0338] Length = 680 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A + +E I GG ++ DNG G+ +E P Sbjct: 54 VYEVVDNSVDEALAGYADHIEVTIQSDGG---IKVVDNGRGIPVDEHP 98 >gi|317499761|ref|ZP_07958017.1| hypothetical protein HMPREF0996_03001 [Lachnospiraceae bacterium 5_1_63FAA] gi|316892963|gb|EFV15189.1| hypothetical protein HMPREF0996_03001 [Lachnospiraceae bacterium 5_1_63FAA] Length = 669 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFF---QITDNGFGMTSEEIPMAVQRHCTSK 79 P A+ E I N DA+++++E + I DNG G+ EE+ + SK Sbjct: 20 PLDALCEYIWNGFDAQANKIEIKLHTNQLRLIDKISIIDNGTGIAYEELGNKFKPFNDSK 79 >gi|315605502|ref|ZP_07880539.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Actinomyces sp. oral taxon 180 str. F0310] gi|315312769|gb|EFU60849.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Actinomyces sp. oral taxon 180 str. F0310] Length = 697 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A + +E I GG ++ DNG G+ +E P Sbjct: 71 VYEVVDNSVDEALAGYADHIEVTIQADGG---IKVVDNGRGIPVDEHP 115 >gi|315273170|ref|ZP_07869216.1| DNA gyrase subunit B [Listeria marthii FSL S4-120] gi|313616206|gb|EFR89285.1| DNA gyrase subunit B [Listeria marthii FSL S4-120] Length = 415 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A + +E I + + DNG G+ Sbjct: 52 EIVDNAIDEALAGFCTEIEITIEAD--NSITVRDNGRGIP 89 >gi|282878003|ref|ZP_06286811.1| DNA gyrase, B subunit [Prevotella buccalis ATCC 35310] gi|281299838|gb|EFA92199.1| DNA gyrase, B subunit [Prevotella buccalis ATCC 35310] Length = 657 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 32/252 (12%), Positives = 74/252 (29%), Gaps = 41/252 (16%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQ---------RH 75 E ++NS+D A + +E I + DNG G+ ++ + H Sbjct: 47 ETVDNSIDEAMAGYCTDIEVTINDD--ESITVQDNGRGIPVDQHEKLHKSALEVVMTVLH 104 Query: 76 CTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS 129 K + + G G AL S + S+ ++ Q K Sbjct: 105 AGGKFDKGSYKV-SGGLHGVGVSCVNALSS-------HMTSQVFRDGKIYQQEYERGKAL 156 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFST- 188 V + + + + + ++I +R +A + T + Sbjct: 157 YPVKVIGETNLRGTRQQFW----PDGSIFTTTHFQWDIIARRMRELAFLNAGIRITLTDL 212 Query: 189 --IKSNRYKMNFQSTNGNFPERISQV--IGEDFINNAVELNEKSNEITLQGYTGIPTFNR 244 + + + E + V ++ + L + I ++ +N Sbjct: 213 RPNEEGKTRTEVFHAKDGLKEFVRYVDRHRTHLFDDVIYLKTEKQGIPIEVAI---MYNT 269 Query: 245 GNANQFYVFING 256 + + ++N Sbjct: 270 DYSENIHSYVNN 281 >gi|256389238|ref|YP_003110802.1| DNA gyrase subunit B [Catenulispora acidiphila DSM 44928] gi|256355464|gb|ACU68961.1| DNA gyrase, B subunit [Catenulispora acidiphila DSM 44928] Length = 661 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 79/255 (30%), Gaps = 37/255 (14%) Query: 27 IKELIENSLD---AE-SSRVET-VIAGGGKSFFQITDNGFGMT--------SEEIPMAVQ 73 + E+++NS+D A + +E ++A GG + DNG G+ + + + Sbjct: 52 VYEIVDNSVDEAMAGYADTIEVWLLADGGVK---VVDNGRGIPVGINTKTGKSALEVVMT 108 Query: 74 -RHCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQ---NNTGAQIAI 123 H K D + + G G AL S + + N Sbjct: 109 ILHAGGKFGDGGYKV-SGGLHGVGVSVVNALSS-----RVEVEVHTDGFVWNQVYKHGVP 162 Query: 124 SGEKISSVRPVAMNPGTIV--EVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 E TI +V T+ + + Q L + + P+ Sbjct: 163 ETEVQKGGPAADTGTSTIFWADVDIFETTVYSFETLSRRFQEMAFLNKGLTISLTDERPE 222 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT 241 F + K + + +F I+ GE N ++ + + TL + Sbjct: 223 --FRDENGEQRSVKYHAEGGIADFVRHINSRKGEPVHPNVIDFEGEDKDRTLAAEIALQW 280 Query: 242 FNRGNANQFYVFING 256 + + Y F N Sbjct: 281 NS-QYSESIYTFANN 294 >gi|150024464|ref|YP_001295290.1| two-component system sensor histidine kinase involved in phosphate regulation [Flavobacterium psychrophilum JIP02/86] gi|149771005|emb|CAL42472.1| Two-component system sensor histidine kinase involved in phosphate regulation [Flavobacterium psychrophilum JIP02/86] Length = 354 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 4/56 (7%) Query: 25 IAIKELIENSLD----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 + L+ENS+ S+ + K + DNG G+ + I +R Sbjct: 245 QVVTNLVENSIKYGKIGGSTEIGVEEVINNKILINVKDNGEGIEKQNISRLFERFY 300 >gi|116053662|ref|YP_793989.1| putative two-component sensor [Pseudomonas aeruginosa UCBPP-PA14] gi|218894615|ref|YP_002443485.1| putative two-component sensor [Pseudomonas aeruginosa LESB58] gi|254243062|ref|ZP_04936384.1| hypothetical protein PA2G_03852 [Pseudomonas aeruginosa 2192] gi|296392377|ref|ZP_06881852.1| putative two-component sensor [Pseudomonas aeruginosa PAb1] gi|313111547|ref|ZP_07797346.1| putative sensor histidine kinase [Pseudomonas aeruginosa 39016] gi|115588883|gb|ABJ14898.1| putative sensor histidine kinase [Pseudomonas aeruginosa UCBPP-PA14] gi|126196440|gb|EAZ60503.1| hypothetical protein PA2G_03852 [Pseudomonas aeruginosa 2192] gi|218774844|emb|CAW30662.1| probable two-component sensor [Pseudomonas aeruginosa LESB58] gi|310883848|gb|EFQ42442.1| putative sensor histidine kinase [Pseudomonas aeruginosa 39016] Length = 588 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAESSR----VETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + + + + GG + DNG G+ +E + Sbjct: 476 RLEQVLVNLLRNALDAVAGQERPWIRLALQRLGGDWVLSVADNGGGIPAEHLGSVFDPFF 535 Query: 77 TSK 79 T+K Sbjct: 536 TTK 538 >gi|15600705|ref|NP_254199.1| MifS [Pseudomonas aeruginosa PAO1] gi|107104614|ref|ZP_01368532.1| hypothetical protein PaerPA_01005693 [Pseudomonas aeruginosa PACS2] gi|254237808|ref|ZP_04931131.1| hypothetical protein PACG_03904 [Pseudomonas aeruginosa C3719] gi|9951848|gb|AAG08897.1|AE004963_10 MifS [Pseudomonas aeruginosa PAO1] gi|126169739|gb|EAZ55250.1| hypothetical protein PACG_03904 [Pseudomonas aeruginosa C3719] Length = 588 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAESSR----VETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + + + + GG + DNG G+ +E + Sbjct: 476 RLEQVLVNLLRNALDAVAGQERPWIRLALQRLGGDWVLSVADNGGGIPAEHLGSVFDPFF 535 Query: 77 TSK 79 T+K Sbjct: 536 TTK 538 >gi|327485737|gb|AEA80143.1| DNA mismatch repair protein MutL [Vibrio cholerae LMA3894-4] Length = 233 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 6/74 (8%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGG---GKSFFQITDNGFGMTSEEIPMAVQRHCTS- 78 I ELI N DA + V I G + D+G G+ R S Sbjct: 29 LQSVI-ELIANGFDANAQTVHVDIEYSEMDGLVSVSVCDDGTGIDIGSCDEHFSRFYESS 87 Query: 79 -KISDDFSNIHTFG 91 K DD H G Sbjct: 88 KKDDDDLQGAHGRG 101 >gi|325289366|ref|YP_004265547.1| integral membrane sensor signal transduction histidine kinase [Syntrophobotulus glycolicus DSM 8271] gi|324964767|gb|ADY55546.1| integral membrane sensor signal transduction histidine kinase [Syntrophobotulus glycolicus DSM 8271] Length = 350 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Query: 31 IENSLDAESSRVETVIAGGGK---SFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNI 87 ++N+LD + + VI G + + DNG G+ E+I +R S+ D I Sbjct: 246 VKNALDHTDTGGQIVIEWKGLPAITQITVRDNGSGIHPEDIHHIFKRFYRSRFFKDTQGI 305 Query: 88 H 88 Sbjct: 306 G 306 >gi|290892043|ref|ZP_06555040.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] gi|290558637|gb|EFD92154.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071] Length = 380 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A + +E I + + DNG G+ Sbjct: 52 EIVDNAIDEALAGFCTEIEITIEAD--NSITVRDNGRGIP 89 >gi|104781515|ref|YP_608013.1| sensor histidine kinase [Pseudomonas entomophila L48] gi|95110502|emb|CAK15210.1| putative sensor histidine kinase [Pseudomonas entomophila L48] Length = 428 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Query: 21 ERPSI---AIKELIENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 RP + L++N+L A ++ +E G + ++ D+G G+ ++E+ ++ Sbjct: 322 TRPHALRRVLVNLVDNALKFAGAAHLEVRHEQ-GVTQIRVLDDGPGIPADELDEVLKPFY 380 >gi|150390976|ref|YP_001321025.1| integral membrane sensor signal transduction histidine kinase [Alkaliphilus metalliredigens QYMF] gi|149950838|gb|ABR49366.1| integral membrane sensor signal transduction histidine kinase [Alkaliphilus metalliredigens QYMF] Length = 586 Score = 47.7 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 6/62 (9%) Query: 24 SIAIKELIENSLDA-----ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCT 77 S I L+ N++DA ++ VI G K I DNG GM E + Q + + Sbjct: 478 SQVILNLVNNAIDAMKDNKGIREIKIVIHEGEKDVQVTIEDNGGGMPKEIVDRIFQPYVS 537 Query: 78 SK 79 +K Sbjct: 538 TK 539 >gi|322373420|ref|ZP_08047956.1| DNA gyrase, B subunit [Streptococcus sp. C150] gi|321278462|gb|EFX55531.1| DNA gyrase, B subunit [Streptococcus sp. C150] Length = 650 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ ++ I + + D+G G+ Sbjct: 51 EIVDNSIDEALAGFATHIQVFIEPD--NSITVVDDGRGIP 88 >gi|313625793|gb|EFR95411.1| DNA gyrase subunit B [Listeria innocua FSL J1-023] Length = 386 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A + +E I + + DNG G+ Sbjct: 52 EIVDNAIDEALAGFCTEIEITIEAD--NSITVRDNGRGIP 89 >gi|312880510|ref|ZP_07740310.1| signal transduction histidine kinase regulating citrate/malate metabolism [Aminomonas paucivorans DSM 12260] gi|310783801|gb|EFQ24199.1| signal transduction histidine kinase regulating citrate/malate metabolism [Aminomonas paucivorans DSM 12260] Length = 182 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 3/49 (6%) Query: 32 ENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCT 77 ENS++A + V + + ++ D+G GM + T Sbjct: 14 ENSVNAGARNVTLQVEENRRDNRLRLEVQDDGCGMEERVLRQVTDPFYT 62 >gi|126665018|ref|ZP_01736001.1| Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Marinobacter sp. ELB17] gi|126630388|gb|EBA01003.1| Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Marinobacter sp. ELB17] Length = 410 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 5/53 (9%) Query: 30 LIENSLDAESSRVETVIAGGGKSF---FQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ NS++A ++ V + G +++DNG G P + T+K Sbjct: 314 LVNNSIEAGATSVRLNLR--GCDHELAIEVSDNGPGFDPAMAPRLQEAFYTTK 364 >gi|88802816|ref|ZP_01118343.1| DNA topoisomerase IV subunit B [Polaribacter irgensii 23-P] gi|88781674|gb|EAR12852.1| DNA topoisomerase IV subunit B [Polaribacter irgensii 23-P] Length = 619 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 76/245 (31%), Gaps = 37/245 (15%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT---- 77 +KE+++NS+D A +E I G S + D G G+ ++ V + T Sbjct: 46 VKEVLDNSIDEYVMGAG-KNIEISIQG---SKVTVRDFGRGIPLGKVVDVVSKMNTGGKY 101 Query: 78 -SKI---SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRP 133 SK S + + T A+ ++ + + SR ++ + + E+ + Sbjct: 102 DSKAFKKSVGLNGVGTK-----AVNALSSFFRVE-SSRDGKSASAEFSQGNLEQQDFLEE 155 Query: 134 VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF-----TFST 188 + GT V K + + +++ P ++ F + Sbjct: 156 SSRRKGTKVS-------FIPDEEIFKKYKFRNEYVAKMLKYYVYLNPGLTIIFNGEKFFS 208 Query: 189 IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNAN 248 + + + + I + G+D + +E G Sbjct: 209 ENGLKDLLEDNNHQEDMLYPIIHLKGDDIEVAITHSKTQYSEEYHSFVNG--QHTTQGGT 266 Query: 249 QFYVF 253 F Sbjct: 267 HQTAF 271 >gi|313678724|ref|YP_004056464.1| DNA topoisomerase IV subunit B [Mycoplasma bovis PG45] gi|312950293|gb|ADR24888.1| DNA topoisomerase IV, B subunit [Mycoplasma bovis PG45] Length = 638 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 29/66 (43%), Gaps = 14/66 (21%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT-------SEEIPMAV-QRHC 76 E+++NS+D A ++ + ++ G ++DNG G+ + + + H Sbjct: 42 EIVDNSIDEALAGEANEIAVILKNDG--SVVVSDNGRGIPVGKTPSGKSAVELVFTELHA 99 Query: 77 TSKISD 82 K ++ Sbjct: 100 GGKFNE 105 >gi|312127642|ref|YP_003992516.1| histidine kinase [Caldicellulosiruptor hydrothermalis 108] gi|311777661|gb|ADQ07147.1| histidine kinase [Caldicellulosiruptor hydrothermalis 108] Length = 183 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 30 LIENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCT 77 L++NS++A++S V+ IA K I DNG G+ + I T Sbjct: 11 LVQNSIEADASLVKIEIAEDLKEDLFTITIEDNGRGIPQDVIDKVTDPFYT 61 >gi|242279338|ref|YP_002991467.1| histidine kinase [Desulfovibrio salexigens DSM 2638] gi|242122232|gb|ACS79928.1| histidine kinase [Desulfovibrio salexigens DSM 2638] Length = 304 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%) Query: 30 LIENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSN 86 L++N++ A R E VI GGK ++ DNG G+ +++P T+K ++ + Sbjct: 204 LLKNAIQAVGHRGEIVISSRREGGKVVVRVADNGVGIAEDKLPHIFTPFFTTKSPEEGTG 263 Query: 87 IH 88 I Sbjct: 264 IG 265 >gi|169825626|ref|YP_001695784.1| DNA gyrase subunit B [Lysinibacillus sphaericus C3-41] gi|168990114|gb|ACA37654.1| DNA gyrase subunit B [Lysinibacillus sphaericus C3-41] Length = 644 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 23/40 (57%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + ++ I +++ ++ DNG G+ Sbjct: 52 EIVDNSIDEALAGFCTDIQVTIEK--ENWIRVEDNGRGIP 89 >gi|126651999|ref|ZP_01724191.1| DNA gyrase subunit B [Bacillus sp. B14905] gi|126591268|gb|EAZ85377.1| DNA gyrase subunit B [Bacillus sp. B14905] Length = 644 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 23/40 (57%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + ++ I +++ ++ DNG G+ Sbjct: 52 EIVDNSIDEALAGFCTDIQVTIEK--ENWIRVEDNGRGIP 89 >gi|114767141|ref|ZP_01446021.1| C4-dicarboxylate transport sensor protein DctB, putative [Pelagibaca bermudensis HTCC2601] gi|114540703|gb|EAU43771.1| C4-dicarboxylate transport sensor protein DctB, putative [Roseovarius sp. HTCC2601] Length = 567 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 17/91 (18%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N++DA ++ +E ++A G + + DNG G+ E++ + Sbjct: 457 RIEQVLVNLLRNAIDA--TKSVAQPELEIILASGETATLSVRDNGHGI--EDMDALFEPF 512 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHL 106 T+K D + + G A+ S G V+ L Sbjct: 513 YTTKQPGDGTGL------GLAISS-GIVADL 536 >gi|114706874|ref|ZP_01439774.1| Sensory Transduction Histidine Kinase [Fulvimarina pelagi HTCC2506] gi|114537822|gb|EAU40946.1| Sensory Transduction Histidine Kinase [Fulvimarina pelagi HTCC2506] Length = 471 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 26/54 (48%), Gaps = 8/54 (14%) Query: 30 LIENSL------DAESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N+L D +++V I + ++DNG G+ +++ ++R Sbjct: 360 LVDNALKYGRSPD-GATKVTIAIEETPNAARICVSDNGAGIPADKRSRVLERFY 412 >gi|149907751|ref|ZP_01896498.1| DNA topoisomerase IV subunit B [Moritella sp. PE36] gi|149809421|gb|EDM69350.1| DNA topoisomerase IV subunit B [Moritella sp. PE36] Length = 629 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 73/205 (35%), Gaps = 25/205 (12%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE----------E 67 RP+ +E+I+NS+D A + + + +++D+G GM + E Sbjct: 31 RPNHLGQEVIDNSVDEALAGHAQSITVTLHAD--QSLEVSDDGRGMPVDIHPVEGVSGVE 88 Query: 68 IPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + ++ + H K S+D + G G + + A+S + + R QIA Sbjct: 89 LILS-KLHAGGKFSNDSYQ-FSGGLHGVGISVVNALSKRVEITIRRGGQI--YQIAFEHG 144 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 + S V G + F P ++ S + +R A+ P +S F Sbjct: 145 EKVSELEVIGTIGIRTTGTKVHF-WPDP-SYFDSGNFSAKRLVHNLRAKAVLCPGLSIKF 202 Query: 187 STIKSNRYKMNFQSTNGNFPERISQ 211 + + + + + Sbjct: 203 --DDKVNKEKHAWCFEKGLEDYLME 225 >gi|118575833|ref|YP_875576.1| DNA mismatch repair enzyme [Cenarchaeum symbiosum A] gi|118194354|gb|ABK77272.1| DNA mismatch repair enzyme [Cenarchaeum symbiosum A] Length = 572 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 10/57 (17%) Query: 22 RPSIAIKELIENSLDAESSRVET----VIAGG------GKSFFQITDNGFGMTSEEI 68 P+ AI E+I+NS +A++ ++E I +TDNG GMT E++ Sbjct: 8 NPAYAIAEIIDNSFEADADKIEIFCKDKIEDSLANMVERMHEIIVTDNGTGMTKEDL 64 >gi|301633042|ref|XP_002945587.1| PREDICTED: DNA gyrase subunit B-like, partial [Xenopus (Silurana) tropicalis] Length = 506 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 +R + E+++NS+D A +E I + + DNG G+ + Sbjct: 6 QRLHHLVYEVVDNSIDEALAGYCDHIEVAINED--NSITVQDNGRGIPVD 53 >gi|218294842|ref|ZP_03495696.1| histidine kinase [Thermus aquaticus Y51MC23] gi|218244750|gb|EED11274.1| histidine kinase [Thermus aquaticus Y51MC23] Length = 407 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 21 ERPSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIP 69 +R + L+ N+L A + RV G + ++ D+G G+ E +P Sbjct: 355 DRLHQVLANLVSNALKAGAKRVWLRAFDLGDRVVVRVEDDGEGIPPEHLP 404 >gi|78707365|gb|ABB46488.1| DNA gyrase subunit B [Acholeplasma pleciae] Length = 587 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD-A--E-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I G ++TDNG G+ + Sbjct: 23 EIVDNSIDEALGGYADEITIEILKG--EIIRVTDNGRGIPVD 62 >gi|30088962|gb|AAP13529.1| DNA gyrase subunit B [Acholeplasma pleciae] Length = 536 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD-A--E-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I G ++TDNG G+ + Sbjct: 13 EIVDNSIDEALGGYADEITIEILKG--EIIRVTDNGRGIPVD 52 >gi|85703008|ref|ZP_01034112.1| hypothetical protein ROS217_19742 [Roseovarius sp. 217] gi|85671936|gb|EAQ26793.1| hypothetical protein ROS217_19742 [Roseovarius sp. 217] Length = 797 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 28/205 (13%) Query: 26 AIKELIENSLD-------AESS----RVETVI--AGGGKSFFQITDNGFGMTSEEIPMAV 72 + EL++N++D A SS +V+ + A + +I DNG GMT + + AV Sbjct: 37 CVAELVDNAVDGFLKESRAGSSIAGAKVDVHLPQADAPAATLRIIDNGPGMTPDMLERAV 96 Query: 73 QRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVR 132 + + D + GF A +G+V+ + + + G I ++ Sbjct: 97 RAGWSGNNPIDSLGLFGMGFN-IATARLGSVTEVWTTRKGEREWHGLLIDFDKLRLQRHF 155 Query: 133 PVAM---------NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK-- 181 GT + ++ L R K+ ++ P+ Sbjct: 156 RTPRLSRAKADPEQHGTEITIKQL--KPEQRKWLAKNANQTAMRKRLAQAYSSMLRPRGT 213 Query: 182 -VSFTFSTIKSNRYKMNFQSTNGNF 205 +SF N + Sbjct: 214 PISFELYLNHKRVEARRHCLWNEDR 238 >gi|329770365|ref|ZP_08261747.1| DNA gyrase subunit B [Gemella sanguinis M325] gi|328836488|gb|EGF86148.1| DNA gyrase subunit B [Gemella sanguinis M325] Length = 638 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + I ++ ++ DNG G+ + Sbjct: 46 EIVDNSIDEALAGHCDTITVAIEKD--NWIRVEDNGRGIPID 85 >gi|313640123|gb|EFS04742.1| DNA gyrase, B subunit [Listeria seeligeri FSL S4-171] Length = 107 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A + +E I + + DNG G+ Sbjct: 52 EIVDNAIDEALAGFCTEIEITIEAD--NSITVRDNGRGIP 89 >gi|183601375|ref|ZP_02962745.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis HN019] gi|219683430|ref|YP_002469813.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis AD011] gi|241191126|ref|YP_002968520.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196532|ref|YP_002970087.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218981|gb|EDT89622.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis HN019] gi|219621080|gb|ACL29237.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis AD011] gi|240249518|gb|ACS46458.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251086|gb|ACS48025.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178872|gb|ADC86118.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis BB-12] gi|295794115|gb|ADG33650.1| DNA gyrase subunit B [Bifidobacterium animalis subsp. lactis V9] Length = 779 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AES-SRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A + + + + G ++ DNG G+ + Sbjct: 45 EIIDNSVDEALAGACTHIVVTLHEDG--SIEVADNGRGIPVD 84 >gi|149003441|ref|ZP_01828330.1| DNA gyrase subunit B [Streptococcus pneumoniae SP14-BS69] gi|147758624|gb|EDK65622.1| DNA gyrase subunit B [Streptococcus pneumoniae SP14-BS69] Length = 128 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|300742652|ref|ZP_07072673.1| DNA gyrase, B subunit [Rothia dentocariosa M567] gi|300381837|gb|EFJ78399.1| DNA gyrase, B subunit [Rothia dentocariosa M567] Length = 676 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I GG ++ D+G G+ +E P Sbjct: 43 VYEVVDNSVDEALAGYASHIEVTIQADGG---VRVQDDGRGIPVDEHP 87 >gi|311112567|ref|YP_003983789.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Rothia dentocariosa ATCC 17931] gi|310944061|gb|ADP40355.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Rothia dentocariosa ATCC 17931] Length = 676 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I GG ++ D+G G+ +E P Sbjct: 43 VYEVVDNSVDEALAGYASHIEVTIQADGG---VRVQDDGRGIPVDEHP 87 >gi|170717616|ref|YP_001784698.1| histidine kinase [Haemophilus somnus 2336] gi|168825745|gb|ACA31116.1| histidine kinase [Haemophilus somnus 2336] Length = 554 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 33 NSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 N+L A++S ++ ++ K +I DNG G E+ TSK Sbjct: 463 NALQAKASMIDIIVEKEQKELKIRILDNGTGFQQIELDFPFVPFRTSK 510 >gi|294495525|ref|YP_003542018.1| DNA gyrase subunit B [Methanohalophilus mahii DSM 5219] gi|292666524|gb|ADE36373.1| DNA gyrase subunit B [Methanohalophilus mahii DSM 5219] Length = 634 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + ++ I G + D+G G+ ++ Sbjct: 41 VYEVVDNSIDEALAGYCTSIDVSINRDG--SVTVRDDGRGIPTD 82 >gi|295689928|ref|YP_003593621.1| hypothetical protein Cseg_2549 [Caulobacter segnis ATCC 21756] gi|295431831|gb|ADG11003.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756] Length = 642 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 7/67 (10%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFG 62 R L + AG II ++A+ EL+ N+ DA ++ V G + F I DNG G Sbjct: 13 RFLDKH------AGAIISDLTVALVELVANAWDAYATEVHIQWPDGTQDRPFSIRDNGKG 66 Query: 63 MTSEEIP 69 +T E+ Sbjct: 67 LTGEQFA 73 >gi|255971553|ref|ZP_05422139.1| DNA gyrase subunit B [Enterococcus faecalis T1] gi|255962571|gb|EET95047.1| DNA gyrase subunit B [Enterococcus faecalis T1] Length = 649 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + ++ +I + D+G G+ Sbjct: 51 EIVDNSIDEALAGFAKSIQVIIEPD--DSITVIDDGRGIP 88 >gi|300862234|ref|ZP_07108314.1| DNA gyrase, B subunit [Enterococcus faecalis TUSoD Ef11] gi|300848759|gb|EFK76516.1| DNA gyrase, B subunit [Enterococcus faecalis TUSoD Ef11] Length = 649 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + ++ +I + D+G G+ Sbjct: 51 EIVDNSIDEALAGFAKSIQVIIEPD--DSITVIDDGRGIP 88 >gi|150026379|ref|YP_001297205.1| two-component system sensor histidine kinase [Flavobacterium psychrophilum JIP02/86] gi|149772920|emb|CAL44404.1| Probable two-component system sensor histidine kinase [Flavobacterium psychrophilum JIP02/86] Length = 381 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 30 LIENSLDA--ESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N++DA + +I K+ +ITD+G G+ + + T+K Sbjct: 287 LVKNAIDAMKGRGSIAIIIEDDWKTTKIKITDSGKGIPKNQFKTIFEPGFTTK 339 >gi|254225218|ref|ZP_04918831.1| inner membrane ABC transporter permease protein YejB [Vibrio cholerae V51] gi|125622317|gb|EAZ50638.1| inner membrane ABC transporter permease protein YejB [Vibrio cholerae V51] Length = 998 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 18 EIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E I AI EL +N+ DA++ V I G +S I DNGFGM++ + T Sbjct: 21 EQIADCPTAISELWKNAYDADADEVALHILDGEQSVAAIVDNGFGMSATDFEEKWLTVGT 80 Query: 78 -SKISDDFSN 86 SKI + N Sbjct: 81 DSKIESEVDN 90 >gi|113461043|ref|YP_719110.1| sensor kinase [Haemophilus somnus 129PT] gi|112823086|gb|ABI25175.1| sensor kinase [Haemophilus somnus 129PT] Length = 565 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 33 NSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 N+L A++S ++ ++ K +I DNG G E+ TSK Sbjct: 474 NALQAKASMIDIIVEKEQKELKIRILDNGTGFQQIELDFPFVPFRTSK 521 >gi|29374666|ref|NP_813818.1| DNA gyrase subunit B [Enterococcus faecalis V583] gi|257418838|ref|ZP_05595832.1| DNA gyrase B gyrB [Enterococcus faecalis T11] gi|29342124|gb|AAO79890.1| DNA gyrase, B subunit [Enterococcus faecalis V583] gi|257160666|gb|EEU90626.1| DNA gyrase B gyrB [Enterococcus faecalis T11] Length = 642 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + ++ +I + D+G G+ Sbjct: 44 EIVDNSIDEALAGFAKSIQVIIEPD--DSITVIDDGRGIP 81 >gi|227518104|ref|ZP_03948153.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX0104] gi|227555689|ref|ZP_03985736.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis HH22] gi|229547125|ref|ZP_04435850.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX1322] gi|229550695|ref|ZP_04439420.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis ATCC 29200] gi|255974526|ref|ZP_05425112.1| subunit B [Enterococcus faecalis T2] gi|256618523|ref|ZP_05475369.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 4200] gi|256761858|ref|ZP_05502438.1| hypothetical protein EFCG_02340 [Enterococcus faecalis T3] gi|256854985|ref|ZP_05560346.1| hypothetical protein EFYG_02228 [Enterococcus faecalis T8] gi|256957011|ref|ZP_05561182.1| DNA gyrase subunit B [Enterococcus faecalis DS5] gi|256960820|ref|ZP_05564991.1| hypothetical protein EFGG_02710 [Enterococcus faecalis Merz96] gi|256963987|ref|ZP_05568158.1| hypothetical protein EFHG_02347 [Enterococcus faecalis HIP11704] gi|257078688|ref|ZP_05573049.1| hypothetical protein EFIG_02258 [Enterococcus faecalis JH1] gi|257081351|ref|ZP_05575712.1| DNA gyrase subunit B [Enterococcus faecalis E1Sol] gi|257084008|ref|ZP_05578369.1| DNA gyrase subunit B [Enterococcus faecalis Fly1] gi|257087838|ref|ZP_05582199.1| DNA gyrase subunit B [Enterococcus faecalis D6] gi|257088490|ref|ZP_05582851.1| DNA gyrase B subunit gyrB [Enterococcus faecalis CH188] gi|257417430|ref|ZP_05594424.1| DNA gyrase subunit B [Enterococcus faecalis AR01/DG] gi|257421347|ref|ZP_05598337.1| DNA gyrase subunit B gyrB [Enterococcus faecalis X98] gi|293382658|ref|ZP_06628586.1| DNA gyrase, B subunit [Enterococcus faecalis R712] gi|293387930|ref|ZP_06632466.1| DNA gyrase, B subunit [Enterococcus faecalis S613] gi|294781253|ref|ZP_06746600.1| DNA gyrase, B subunit [Enterococcus faecalis PC1.1] gi|307268921|ref|ZP_07550285.1| DNA gyrase, B subunit [Enterococcus faecalis TX4248] gi|307274016|ref|ZP_07555226.1| DNA gyrase, B subunit [Enterococcus faecalis TX0855] gi|307276495|ref|ZP_07557615.1| DNA gyrase, B subunit [Enterococcus faecalis TX2134] gi|307284063|ref|ZP_07564233.1| DNA gyrase, B subunit [Enterococcus faecalis TX0860] gi|307287177|ref|ZP_07567248.1| DNA gyrase, B subunit [Enterococcus faecalis TX0109] gi|307296594|ref|ZP_07576414.1| DNA gyrase, B subunit [Enterococcus faecalis TX0411] gi|312901292|ref|ZP_07760575.1| DNA gyrase, B subunit [Enterococcus faecalis TX0470] gi|312903111|ref|ZP_07762292.1| DNA gyrase, B subunit [Enterococcus faecalis TX0635] gi|312908810|ref|ZP_07767749.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 512] gi|312951716|ref|ZP_07770610.1| DNA gyrase, B subunit [Enterococcus faecalis TX0102] gi|312979548|ref|ZP_07791230.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 516] gi|15982567|dbj|BAB69478.1| DNA gyrase B subunit [Enterococcus faecalis] gi|227074438|gb|EEI12401.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX0104] gi|227175199|gb|EEI56171.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis HH22] gi|229304128|gb|EEN70124.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis ATCC 29200] gi|229307707|gb|EEN73694.1| DNA topoisomerase (ATP-hydrolyzing) [Enterococcus faecalis TX1322] gi|255967398|gb|EET98020.1| subunit B [Enterococcus faecalis T2] gi|256598050|gb|EEU17226.1| DNA gyrase subunit B [Enterococcus faecalis ATCC 4200] gi|256683109|gb|EEU22804.1| hypothetical protein EFCG_02340 [Enterococcus faecalis T3] gi|256709498|gb|EEU24545.1| hypothetical protein EFYG_02228 [Enterococcus faecalis T8] gi|256947507|gb|EEU64139.1| DNA gyrase subunit B [Enterococcus faecalis DS5] gi|256951316|gb|EEU67948.1| hypothetical protein EFGG_02710 [Enterococcus faecalis Merz96] gi|256954483|gb|EEU71115.1| hypothetical protein EFHG_02347 [Enterococcus faecalis HIP11704] gi|256986718|gb|EEU74020.1| hypothetical protein EFIG_02258 [Enterococcus faecalis JH1] gi|256989381|gb|EEU76683.1| DNA gyrase subunit B [Enterococcus faecalis E1Sol] gi|256992038|gb|EEU79340.1| DNA gyrase subunit B [Enterococcus faecalis Fly1] gi|256995868|gb|EEU83170.1| DNA gyrase subunit B [Enterococcus faecalis D6] gi|256997302|gb|EEU83822.1| DNA gyrase B subunit gyrB [Enterococcus faecalis CH188] gi|257159258|gb|EEU89218.1| DNA gyrase subunit B [Enterococcus faecalis ARO1/DG] gi|257163171|gb|EEU93131.1| DNA gyrase subunit B gyrB [Enterococcus faecalis X98] gi|291079964|gb|EFE17328.1| DNA gyrase, B subunit [Enterococcus faecalis R712] gi|291082667|gb|EFE19630.1| DNA gyrase, B subunit [Enterococcus faecalis S613] gi|294451716|gb|EFG20171.1| DNA gyrase, B subunit [Enterococcus faecalis PC1.1] gi|295112344|emb|CBL30981.1| DNA gyrase subunit B [Enterococcus sp. 7L76] gi|306495930|gb|EFM65518.1| DNA gyrase, B subunit [Enterococcus faecalis TX0411] gi|306501775|gb|EFM71066.1| DNA gyrase, B subunit [Enterococcus faecalis TX0109] gi|306503434|gb|EFM72683.1| DNA gyrase, B subunit [Enterococcus faecalis TX0860] gi|306506822|gb|EFM75972.1| DNA gyrase, B subunit [Enterococcus faecalis TX2134] gi|306509324|gb|EFM78384.1| DNA gyrase, B subunit [Enterococcus faecalis TX0855] gi|306514729|gb|EFM83280.1| DNA gyrase, B subunit [Enterococcus faecalis TX4248] gi|310625248|gb|EFQ08531.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 512] gi|310630289|gb|EFQ13572.1| DNA gyrase, B subunit [Enterococcus faecalis TX0102] gi|310633502|gb|EFQ16785.1| DNA gyrase, B subunit [Enterococcus faecalis TX0635] gi|311287730|gb|EFQ66286.1| DNA gyrase, B subunit [Enterococcus faecalis DAPTO 516] gi|311291669|gb|EFQ70225.1| DNA gyrase, B subunit [Enterococcus faecalis TX0470] gi|315026673|gb|EFT38605.1| DNA gyrase, B subunit [Enterococcus faecalis TX2137] gi|315030118|gb|EFT42050.1| DNA gyrase, B subunit [Enterococcus faecalis TX4000] gi|315033552|gb|EFT45484.1| DNA gyrase, B subunit [Enterococcus faecalis TX0017] gi|315036375|gb|EFT48307.1| DNA gyrase, B subunit [Enterococcus faecalis TX0027] gi|315143591|gb|EFT87607.1| DNA gyrase, B subunit [Enterococcus faecalis TX2141] gi|315148271|gb|EFT92287.1| DNA gyrase, B subunit [Enterococcus faecalis TX4244] gi|315151295|gb|EFT95311.1| DNA gyrase, B subunit [Enterococcus faecalis TX0012] gi|315153721|gb|EFT97737.1| DNA gyrase, B subunit [Enterococcus faecalis TX0031] gi|315155119|gb|EFT99135.1| DNA gyrase, B subunit [Enterococcus faecalis TX0043] gi|315158751|gb|EFU02768.1| DNA gyrase, B subunit [Enterococcus faecalis TX0312] gi|315163335|gb|EFU07352.1| DNA gyrase, B subunit [Enterococcus faecalis TX0645] gi|315165723|gb|EFU09740.1| DNA gyrase, B subunit [Enterococcus faecalis TX1302] gi|315168224|gb|EFU12241.1| DNA gyrase, B subunit [Enterococcus faecalis TX1341] gi|315170508|gb|EFU14525.1| DNA gyrase, B subunit [Enterococcus faecalis TX1342] gi|315174178|gb|EFU18195.1| DNA gyrase, B subunit [Enterococcus faecalis TX1346] gi|315573987|gb|EFU86178.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309B] gi|315578843|gb|EFU91034.1| DNA gyrase, B subunit [Enterococcus faecalis TX0630] gi|315581938|gb|EFU94129.1| DNA gyrase, B subunit [Enterococcus faecalis TX0309A] gi|323479244|gb|ADX78683.1| DNA gyrase, B subunit [Enterococcus faecalis 62] gi|327533858|gb|AEA92692.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus faecalis OG1RF] gi|329576322|gb|EGG57837.1| DNA gyrase, B subunit [Enterococcus faecalis TX1467] Length = 649 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + ++ +I + D+G G+ Sbjct: 51 EIVDNSIDEALAGFAKSIQVIIEPD--DSITVIDDGRGIP 88 >gi|317054739|ref|YP_004103206.1| DNA gyrase subunit B [Ruminococcus albus 7] gi|315447008|gb|ADU20572.1| DNA gyrase, B subunit [Ruminococcus albus 7] Length = 662 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++N++D A + + I G ++ DNG G+ Sbjct: 60 VYEIVDNAIDEALAGYCTEIIVDILPG--DVIRVVDNGRGIP 99 >gi|325678556|ref|ZP_08158167.1| DNA gyrase, B subunit [Ruminococcus albus 8] gi|324109775|gb|EGC03980.1| DNA gyrase, B subunit [Ruminococcus albus 8] Length = 665 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++N++D A + + I G ++ DNG G+ Sbjct: 63 VYEIVDNAIDEALAGYCTEIIVDILPG--DVIRVVDNGRGIP 102 >gi|296109554|ref|YP_003616503.1| DNA topoisomerase VI, B subunit [Methanocaldococcus infernus ME] gi|295434368|gb|ADG13539.1| DNA topoisomerase VI, B subunit [Methanocaldococcus infernus ME] Length = 656 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 11/80 (13%) Query: 20 IERPSIAIKELIENSLDA--ES---SRVETVIAGGGKS--FFQITDNGFGMTSEEIPMAV 72 I + + EL+ NSLDA E+ V+ I G + DNG G+ E +P Sbjct: 30 IRSMTTIVHELVTNSLDACEEALILPEVKVEIEKLGTDHYRVAVEDNGPGIPPEFVPKVF 89 Query: 73 QR-HCTSKISDDFSNIHTFG 91 + SK+ +I + G Sbjct: 90 GKMLAGSKMH---RHIQSRG 106 >gi|225016753|ref|ZP_03705945.1| hypothetical protein CLOSTMETH_00665 [Clostridium methylpentosum DSM 5476] gi|224950421|gb|EEG31630.1| hypothetical protein CLOSTMETH_00665 [Clostridium methylpentosum DSM 5476] Length = 642 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++N++D A ++++ I G + DNG G+ Sbjct: 42 VYEIVDNAIDEALAGFCTQIDVEILPGNI--IHVVDNGRGIP 81 >gi|327192962|gb|EGE59878.1| integral membrane sensor signal transduction histidine kinase [Rhizobium etli CNPAF512] Length = 447 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Query: 26 AIKELIENSLD--AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 A+ L+ N++D S + ++ G + D G G+ +E + + Sbjct: 353 AVSNLVRNAIDHGGGSGMITVSVSASGGGRISVADEGPGIPAEHRELVFEPFY 405 >gi|332157796|ref|YP_004423075.1| DNA topoisomerase VI subunit B [Pyrococcus sp. NA2] gi|331033259|gb|AEC51071.1| DNA topoisomerase VI subunit B [Pyrococcus sp. NA2] Length = 564 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 7/60 (11%) Query: 20 IERPSIAIKELIENSLDA--ESSR---VETVIAGGGKS--FFQITDNGFGMTSEEIPMAV 72 I + I E + NSLDA E+ + I GK + DNG G+ E IP Sbjct: 33 IRSLTTIIHEAVTNSLDACEEAGILPYIRVEIEELGKEHYKIIVEDNGPGIPEEYIPHVF 92 >gi|300726297|ref|ZP_07059750.1| DNA gyrase, B subunit [Prevotella bryantii B14] gi|299776494|gb|EFI73051.1| DNA gyrase, B subunit [Prevotella bryantii B14] Length = 658 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 E ++NS+D A + V+ + G + DNG G+ +E Sbjct: 47 ETVDNSIDEAMAGYCTDVQVTVNEDG--SITVEDNGRGIPVDEHKKL 91 >gi|317126747|ref|YP_004093029.1| DNA gyrase subunit beta [Bacillus cellulosilyticus DSM 2522] gi|315471695|gb|ADU28298.1| DNA gyrase, B subunit [Bacillus cellulosilyticus DSM 2522] Length = 640 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + + DNG G+ Sbjct: 47 EIVDNSIDEAMAGYCDTITVTIEED--NSITVEDNGRGIP 84 >gi|254672434|emb|CBA05804.1| hypothetical protein predicted by Glimmer/Critica [Neisseria meningitidis alpha275] Length = 32 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 18/24 (75%) Query: 2 KIRKLSEKIINQIAAGEIIERPSI 25 +I L + ++NQIAAGE++ERP Sbjct: 3 RIAALPDHLVNQIAAGEVVERPCQ 26 >gi|23978247|dbj|BAC21116.1| DNA gyrase B subunit [Stanieria cyanosphaera str. PCC 7437] Length = 393 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + +E + G ++TD+G G+ Sbjct: 10 VYEVVDNSIDEALAGYCTHIEIELNADG--SVRVTDDGRGIP 49 >gi|319645217|ref|ZP_07999450.1| hypothetical protein HMPREF1012_00483 [Bacillus sp. BT1B_CT2] gi|317393026|gb|EFV73820.1| hypothetical protein HMPREF1012_00483 [Bacillus sp. BT1B_CT2] Length = 181 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 5/51 (9%) Query: 30 LIENSL---DAESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 LI+N++ +A + V+ A G + D+G G+ E++P +R Sbjct: 75 LIDNAIRHTNAGGTVHVDVQSAESGLK-IAVKDSGSGIPEEDLPFIFERFY 124 >gi|300692696|ref|YP_003753691.1| sensor histidine kinase, transcriptional regulator of C4-dicarboxylate transport [Ralstonia solanacearum PSI07] gi|299079756|emb|CBJ52432.1| sensor histidine kinase, transcriptional regulator of C4-dicarboxylate transport [Ralstonia solanacearum PSI07] Length = 665 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 11/61 (18%) Query: 30 LIENSLDAESSR-------VETVI--AGGGKS--FFQITDNGFGMTSEEIPMAVQRHCTS 78 LI N+LDA ++ ++ I A G + + DNG G+ ++ +P + T+ Sbjct: 554 LIGNALDAIAANDLPRPGHIDIDIGPADGAPTQLCIVVRDNGHGIPADAMPHLFEPFFTT 613 Query: 79 K 79 K Sbjct: 614 K 614 >gi|285017938|ref|YP_003375649.1| DNA topoisomerase iv subunit b protein [Xanthomonas albilineans GPE PC73] gi|283473156|emb|CBA15662.1| probable dna topoisomerase iv subunit b protein [Xanthomonas albilineans] Length = 629 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+N++D A + +E + G +++D+G GM EE + Sbjct: 31 RPNHLAQEVIDNAVDEALAGHARHIEVTLYKDG--SCEVSDDGRGMPVDIHPEEKISGVE 88 Query: 70 MAVQR-HCTSKISD 82 + + R H K SD Sbjct: 89 LILTRLHAGGKFSD 102 >gi|218246132|ref|YP_002371503.1| DNA gyrase subunit B [Cyanothece sp. PCC 8801] gi|257059181|ref|YP_003137069.1| DNA gyrase subunit B [Cyanothece sp. PCC 8802] gi|218166610|gb|ACK65347.1| DNA gyrase, B subunit [Cyanothece sp. PCC 8801] gi|256589347|gb|ACV00234.1| DNA gyrase, B subunit [Cyanothece sp. PCC 8802] Length = 641 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 40 VYEVVDNSIDEALAGYCTHIEIDINSDG--SVTVTDDGRGIPTD 81 >gi|126541050|emb|CAM46137.1| microrchidia 4 [Mus musculus] Length = 273 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + K TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKKKPCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|12856723|dbj|BAB30759.1| unnamed protein product [Mus musculus] Length = 797 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + K TD+G GMT ++ + T Sbjct: 131 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKKKPCLTFTDDGCGMTPHKLHRMLSFGFT 190 Query: 78 SK 79 K Sbjct: 191 DK 192 >gi|26339370|dbj|BAC33356.1| unnamed protein product [Mus musculus] Length = 173 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + K TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKKKPCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|229083320|ref|ZP_04215682.1| DNA gyrase subunit B [Bacillus cereus Rock3-44] gi|228699995|gb|EEL52618.1| DNA gyrase subunit B [Bacillus cereus Rock3-44] Length = 640 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + ++TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVAIEED--NSIRVTDNGRGIP 84 >gi|162446893|ref|YP_001620025.1| DNA gyrase subunit B [Acholeplasma laidlawii PG-8A] gi|161985000|gb|ABX80649.1| DNA gyrase, subunit B [Acholeplasma laidlawii PG-8A] Length = 635 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD-A--E-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I G ++TDNG G+ + Sbjct: 45 EIVDNSIDEALGGYADEITIEILKG--EVIRVTDNGRGIPVD 84 >gi|78707357|gb|ABB46484.1| DNA gyrase subunit B [Acholeplasma laidlawii] Length = 631 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD-A--E-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I G ++TDNG G+ + Sbjct: 41 EIVDNSIDEALGGYADEITIEILKG--EVIRVTDNGRGIPVD 80 >gi|78707355|gb|ABB46483.1| DNA gyrase subunit B [Acholeplasma laidlawii] Length = 631 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD-A--E-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I G ++TDNG G+ + Sbjct: 41 EIVDNSIDEALGGYADEITIEILKG--EVIRVTDNGRGIPVD 80 >gi|78707359|gb|ABB46485.1| DNA gyrase subunit B [Acholeplasma laidlawii] gi|78707361|gb|ABB46486.1| DNA gyrase subunit B [Acholeplasma laidlawii] gi|78707363|gb|ABB46487.1| DNA gyrase subunit B [Acholeplasma laidlawii] Length = 631 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD-A--E-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I G ++TDNG G+ + Sbjct: 41 EIVDNSIDEALGGYADEITIEILKG--EVIRVTDNGRGIPVD 80 >gi|5817861|gb|AAD52967.1|AF167102_1 DNA gyrase beta subunit [Acholeplasma laidlawii] Length = 615 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD-A--E-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I G ++TDNG G+ + Sbjct: 45 EIVDNSIDEALCGYADEITIEILKG--EVIRVTDNGRGIPVD 84 >gi|95929932|ref|ZP_01312672.1| GAF sensor signal transduction histidine kinase [Desulfuromonas acetoxidans DSM 684] gi|95133901|gb|EAT15560.1| GAF sensor signal transduction histidine kinase [Desulfuromonas acetoxidans DSM 684] Length = 549 Score = 47.7 bits (112), Expect = 0.006, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 22/88 (25%) Query: 5 KLSEKIIN--QIAAGEIIERPSIAIKELIENSLDA------ESSRVETVI---AGGGKSF 53 KL N QI +++ L+ N+ DA E + GK + Sbjct: 426 KLPTMTANGPQI--QQVLTNL------LV-NARDALDSLNDEEKVIHVRTHVREKDGKRW 476 Query: 54 --FQITDNGFGMTSEEIPMAVQRHCTSK 79 + DNG G+ +++ TSK Sbjct: 477 AIISVEDNGCGIEEKDLQKIFTPFFTSK 504 >gi|238855510|ref|ZP_04645815.1| DNA gyrase, B subunit [Lactobacillus jensenii 269-3] gi|260665214|ref|ZP_05866063.1| DNA gyrase, B subunit [Lactobacillus jensenii SJ-7A-US] gi|282931536|ref|ZP_06337035.1| DNA gyrase, B subunit [Lactobacillus jensenii 208-1] gi|313472767|ref|ZP_07813255.1| DNA gyrase, B subunit [Lactobacillus jensenii 1153] gi|238831876|gb|EEQ24208.1| DNA gyrase, B subunit [Lactobacillus jensenii 269-3] gi|260560951|gb|EEX26926.1| DNA gyrase, B subunit [Lactobacillus jensenii SJ-7A-US] gi|281304343|gb|EFA96446.1| DNA gyrase, B subunit [Lactobacillus jensenii 208-1] gi|313448866|gb|EEQ68253.2| DNA gyrase, B subunit [Lactobacillus jensenii 1153] Length = 651 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N +D A ++++E + G + D+G G+ + Sbjct: 55 EIIDNGIDECLAGFATKIEVTVEEDG--SVTVQDDGRGIPVD 94 >gi|256851678|ref|ZP_05557066.1| DNA gyrase, B subunit [Lactobacillus jensenii 27-2-CHN] gi|260661605|ref|ZP_05862517.1| DNA gyrase, B subunit [Lactobacillus jensenii 115-3-CHN] gi|282934238|ref|ZP_06339515.1| DNA gyrase, B subunit [Lactobacillus jensenii 208-1] gi|297205287|ref|ZP_06922683.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus jensenii JV-V16] gi|256615636|gb|EEU20825.1| DNA gyrase, B subunit [Lactobacillus jensenii 27-2-CHN] gi|260547662|gb|EEX23640.1| DNA gyrase, B subunit [Lactobacillus jensenii 115-3-CHN] gi|281301712|gb|EFA93979.1| DNA gyrase, B subunit [Lactobacillus jensenii 208-1] gi|297149865|gb|EFH30162.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Lactobacillus jensenii JV-V16] Length = 651 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N +D A ++++E + G + D+G G+ + Sbjct: 55 EIIDNGIDECLAGFATKIEVTVEEDG--SVTVQDDGRGIPVD 94 >gi|227112464|ref|ZP_03826120.1| hypothetical protein PcarbP_05847 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 1011 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 72/194 (37%), Gaps = 14/194 (7%) Query: 25 IAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEI-PMAVQRHCTSK---- 79 AI EL +N+ DA +S VE ++ + D+G GMT E+ + +SK Sbjct: 24 TAIHELFKNAHDAYASNVEIDFFE-SQNLLTLRDDGIGMTKEDFIGKWLTIGTSSKLGIN 82 Query: 80 -----ISDDFSNIHTFGFRGEALPSIGAVSHLTLM-SRPPQNNTGAQIAISGEKISSVRP 133 I + G +G +I ++ L L+ SR +++ + ++ + Sbjct: 83 RKPVFIPEGMDERPLMGEKGIGRLAIASIGRLVLVLSRAIRDDGMHDMVVALVHWTQFEI 142 Query: 134 VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNR 193 +N + + F + +L Q +N I + + ++ P+ + Sbjct: 143 PEINIS-DIVIPVRTFNL-GKLPSQDDIQSMSNEIINNLDKLEEKIPEELYNIIKNDLCS 200 Query: 194 YKMNFQSTNGNFPE 207 + + + N Sbjct: 201 FDFSPEMLFNNLKN 214 >gi|226226556|ref|YP_002760662.1| putative two-component histidine kinase [Gemmatimonas aurantiaca T-27] gi|226089747|dbj|BAH38192.1| putative two-component histidine kinase [Gemmatimonas aurantiaca T-27] Length = 1389 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 24/73 (32%) Query: 30 LIENSLDAESSRVETVIAG----GGKSF-----------------FQITDNGFGMTSEEI 68 L+EN+ A + V ++ GG ++TD+G G+ E + Sbjct: 1264 LLENARLAGARTVTVRVSPASAPGGYDHETPHLPRLADERSHGLAIEVTDDGVGIAPETL 1323 Query: 69 PMAVQRHC---TS 78 P + H TS Sbjct: 1324 PRVFEPHFSTRTS 1336 >gi|196232356|ref|ZP_03131210.1| DNA topoisomerase (ATP-hydrolyzing) [Chthoniobacter flavus Ellin428] gi|196223724|gb|EDY18240.1| DNA topoisomerase (ATP-hydrolyzing) [Chthoniobacter flavus Ellin428] Length = 853 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 7/51 (13%) Query: 21 ER-PSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 ER + E+++NS+D A + ++ I G I DNG G+ + Sbjct: 45 ERALHHCVSEVLDNSVDEFLAGYCTHIDVTIHSDG--SISIRDNGRGIPVD 93 >gi|78043837|ref|YP_361487.1| DNA gyrase subunit B [Carboxydothermus hydrogenoformans Z-2901] gi|77995952|gb|ABB14851.1| DNA gyrase, B subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 635 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +R+E +I G + DNG G+ + Sbjct: 44 VYEVVDNSIDEALAGFCNRIEVIIHKDG--SITVADNGRGIPVD 85 >gi|68534224|gb|AAH98483.1| Morc4 protein [Mus musculus] Length = 480 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + K TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKKKPCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|7387745|sp|Q9ZAQ6|GYRB_MYCAT RecName: Full=DNA gyrase subunit B gi|4099106|gb|AAD09234.1| gyrase B [Mycoplasma arthritidis] Length = 638 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ +E + + ++ DNG GM + Sbjct: 46 EIVDNSVDEAMAGFATNIEVKLHPN--NEIEVIDNGRGMPVD 85 >gi|260433833|ref|ZP_05787804.1| periplasmic sensor signal transduction histidine kinase [Silicibacter lacuscaerulensis ITI-1157] gi|260417661|gb|EEX10920.1| periplasmic sensor signal transduction histidine kinase [Silicibacter lacuscaerulensis ITI-1157] Length = 590 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 10/56 (17%) Query: 30 LIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N+LDA ++ VE ++A G + + DNG G+ E+I + T+K Sbjct: 487 LLRNALDA--TKSVAEPEVEIILAAGETAVLAVRDNGHGI--EDIENLFEPFYTTK 538 >gi|118577294|ref|YP_899534.1| integral membrane sensor signal transduction histidine kinase [Pelobacter propionicus DSM 2379] gi|118504799|gb|ABL01281.1| integral membrane sensor signal transduction histidine kinase [Pelobacter propionicus DSM 2379] Length = 456 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAG----GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 ER S + LI N+L A + + G GG + + D G G+ +EE+P+ +R Sbjct: 343 ERLSQILINLISNALKATAPGGTITLEGKRYPGGCT-ISVIDTGCGIATEELPLIFERFY 401 >gi|309779232|ref|ZP_07673995.1| C4-dicarboxylate transport sensor protein DctB [Ralstonia sp. 5_7_47FAA] gi|308922036|gb|EFP67670.1| C4-dicarboxylate transport sensor protein DctB [Ralstonia sp. 5_7_47FAA] Length = 638 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 19/108 (17%) Query: 22 RPSIAIKELIENSLDAES-------SRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQ 73 R + LI N++DA + S V + K + D G G+ ++ +P + Sbjct: 524 RLEQVLVNLIRNAIDATAEAPAAESSTVRVSVEPIEKWVRITVRDFGPGIPADVLPRLFE 583 Query: 74 RHCTSKISDDFSNIHTFGFRGEALP-SIGAVSHL--TLMSRPPQNNTG 118 T+K DD + G L S+ + L R ++ G Sbjct: 584 PFFTTK--DDGQGLG-LG-----LAISLAIIEDFGGRLEGRNAGDDAG 623 >gi|297830380|ref|XP_002883072.1| hypothetical protein ARALYDRAFT_898105 [Arabidopsis lyrata subsp. lyrata] gi|297328912|gb|EFH59331.1| hypothetical protein ARALYDRAFT_898105 [Arabidopsis lyrata subsp. lyrata] Length = 57 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 27/46 (58%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 EL++NSLDA+ + + V+ GG Q +++ G+ + + VQR Sbjct: 2 ELVKNSLDADFNSISVVVKDGGVKLIQFSEDCLGIRVRFLHLRVQR 47 >gi|295091537|emb|CBK77644.1| Signal transduction histidine kinase [Clostridium cf. saccharolyticum K10] Length = 409 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 30 LIENSLD---AESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 L++N+LD A +E + DNG G+ E+I +R SK S Sbjct: 311 LVKNALDHTEAG-GVIEITWESTPTMLRILVYDNGSGIAPEDIHHIFKRFYRSKYS 365 >gi|296120379|ref|YP_003628157.1| DNA topoisomerase (ATP-hydrolyzing) [Planctomyces limnophilus DSM 3776] gi|296012719|gb|ADG65958.1| DNA topoisomerase (ATP-hydrolyzing) [Planctomyces limnophilus DSM 3776] Length = 635 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 5/42 (11%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ + + G ++DNG G+ + Sbjct: 41 EIVDNSVDECLAGEATEITVTLHKDG-ESCSVSDNGRGIPVD 81 >gi|197294338|ref|YP_001798879.1| DNA gyrase beta subunit [Candidatus Phytoplasma australiense] gi|171853665|emb|CAM11548.1| DNA gyrase beta subunit [Candidatus Phytoplasma australiense] Length = 662 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 12/55 (21%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 E+++NS+D A ++ + I G +TDNG G+ H T K Sbjct: 40 EIVDNSIDEALAGHANEITLEILPG--DIISVTDNGRGIP------VGIHHKTGK 86 >gi|294335677|gb|ADE62388.1| styrene sensor kinase [Pseudomonas sp. LQ26] Length = 979 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 20/85 (23%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDA---ESSRV--------ETVIAGGGKSFF 54 L + ++I +++ LI NS+DA + + + I+ G Sbjct: 856 LPLVLADRIQLQQVVLN-------LILNSVDAIKSAAPVIPRLSLRVSQVEIS--GCIQL 906 Query: 55 QITDNGFGMTSEEIPMAVQRHCTSK 79 ++ DNG G+T+ + + T+K Sbjct: 907 EVEDNGCGVTAAQAERIFEPFYTTK 931 >gi|257124877|ref|YP_003162991.1| signal transduction histidine kinase [Leptotrichia buccalis C-1013-b] gi|257048816|gb|ACV38000.1| signal transduction histidine kinase [Leptotrichia buccalis C-1013-b] Length = 467 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 10/53 (18%) Query: 26 AIKELIENSL-------DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPM 70 + EL+EN + D + + G I+D+G GM ++ Sbjct: 380 IVNELVENCIKHAFKKRDKG--HITIKVKRGEMKSHISISDDGIGMDEKDFEK 430 >gi|220918231|ref|YP_002493535.1| histidine kinase [Anaeromyxobacter dehalogenans 2CP-1] gi|219956085|gb|ACL66469.1| histidine kinase [Anaeromyxobacter dehalogenans 2CP-1] Length = 702 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 22 RPSIAIKELIENS---LDAESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + + L++N+ D + V G++ ++ D+G GM E + Q Sbjct: 454 RIAQVVGNLVQNAAKFTDGGGTVTVAVDATPDGRARIRVRDDGIGMPPEVLERLFQPF 511 >gi|153826434|ref|ZP_01979101.1| DNA gyrase, subunit B [Vibrio cholerae MZO-2] gi|229515946|ref|ZP_04405403.1| DNA gyrase subunit B [Vibrio cholerae TMA 21] gi|149739820|gb|EDM54015.1| DNA gyrase, subunit B [Vibrio cholerae MZO-2] gi|229347046|gb|EEO12008.1| DNA gyrase subunit B [Vibrio cholerae TMA 21] Length = 805 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 79/246 (32%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + I + ++D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGYCKDIVVTIHED--NSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L++ Q G + + V Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKVLLTIYRGGKIHTQTYHHGVPQAPLAVVG 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T VR P+ F + + +++ +R ++ VS + K Sbjct: 159 DTERTGTTVRF----WPSAQTFT-NIEFHYDILAKRLRELSFLNSGVSIKLIDEREEDKK 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 +F G ++ + + + +N G Y F N Sbjct: 214 DHFMYEGG-IQAFVTHLNRNKTPIHEKVFHFNQEREDGISVEVAMQWNDGFQENIYCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|153802491|ref|ZP_01957077.1| DNA gyrase, subunit B [Vibrio cholerae MZO-3] gi|124121961|gb|EAY40704.1| DNA gyrase, subunit B [Vibrio cholerae MZO-3] Length = 805 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 79/246 (32%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + I + ++D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGYCKDIVVTIHED--NSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L++ Q G + + V Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKVLLTIYRGGKIHTQTYHHGVPQAPLAVVG 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T VR P+ F + + +++ +R ++ VS + K Sbjct: 159 DTERTGTTVRF----WPSAQTFT-NIEFHYDILAKRLRELSFLNSGVSIKLIDEREEDKK 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 +F G ++ + + + +N G Y F N Sbjct: 214 DHFMYEGG-IQAFVTHLNRNKTPIHEKVFHFNQEREDGISVEVAMQWNDGFQENIYCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|186470766|ref|YP_001862084.1| histidine kinase [Burkholderia phymatum STM815] gi|184197075|gb|ACC75038.1| histidine kinase [Burkholderia phymatum STM815] Length = 524 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%) Query: 21 ERPSIAIKELIENS----LDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + L++N+ LD R+E + A G ++DNG G+ EE+P + Sbjct: 269 TRLAQVFGNLLDNAVKYTLDGG--RIEIDVTAEEGLVTVAVSDNGTGIAPEELPEIFELF 326 Query: 76 CTS 78 S Sbjct: 327 SQS 329 >gi|106734225|gb|ABF82589.1| DNA topoisomerase IV subunit beta [Exiguobacterium sp. A1] Length = 492 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG G+ + Sbjct: 17 EIVDNSIDEALAGYCDTIKVTIEPG--NSILVEDNGRGIPVD 56 >gi|106734233|gb|ABF82593.1| DNA topoisomerase IV subunit beta [Exiguobacterium sp. TC38] Length = 481 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG G+ + Sbjct: 18 EIVDNSIDEALAGYCDTIKVTIEPG--NSILVEDNGRGIPVD 57 >gi|106734227|gb|ABF82590.1| DNA topoisomerase IV subunit beta [Exiguobacterium sp. A19] Length = 488 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG G+ + Sbjct: 18 EIVDNSIDEALAGYCDTIKVTIEPG--NSILVEDNGRGIPVD 57 >gi|106734229|gb|ABF82591.1| DNA topoisomerase IV subunit beta [Exiguobacterium sp. Indian Stream] Length = 493 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG G+ + Sbjct: 18 EIVDNSIDEALAGYCDTIKVTIEPG--NSILVEDNGRGIPVD 57 >gi|106734223|gb|ABF82588.1| DNA topoisomerase IV subunit beta [Exiguobacterium sp. 5138] Length = 496 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG G+ + Sbjct: 21 EIVDNSIDEALAGYCDTIKVTIEPG--NSILVEDNGRGIPVD 60 >gi|71725916|gb|AAZ39076.1| gyrase subunit B [Exiguobacterium sibiricum] Length = 513 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG G+ + Sbjct: 21 EIVDNSIDEALAGYCDTIKVTIEPG--NSILVEDNGRGIPVD 60 >gi|71725918|gb|AAZ39077.1| gyrase subunit B [Exiguobacterium undae] Length = 513 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG G+ + Sbjct: 21 EIVDNSIDEALAGYCDTIKVTIEPG--NSILVEDNGRGIPVD 60 >gi|71725925|gb|AAZ39080.1| gyrase subunit B [Exiguobacterium acetylicum] Length = 513 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG G+ + Sbjct: 21 EIVDNSIDEALAGYCDTIKVTIEPG--NSILVEDNGRGIPVD 60 >gi|295090414|emb|CBK76521.1| Signal transduction histidine kinase [Clostridium cf. saccharolyticum K10] Length = 414 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 19/65 (29%) Query: 30 LIENSLDAESSRVETVIAGGGKSFFQ-----------ITDNGFGMTSEEIPMAVQRHCTS 78 LI+N+LD GG + ++DNG G++ ++I +R S Sbjct: 311 LIKNALD--------HTERGGLIHIEWKHSPDMLRLSVSDNGCGISQDDIHHIFKRFYRS 362 Query: 79 KISDD 83 + S D Sbjct: 363 RRSSD 367 >gi|239905954|ref|YP_002952693.1| sensor histidine kinase [Desulfovibrio magneticus RS-1] gi|239795818|dbj|BAH74807.1| sensor histidine kinase [Desulfovibrio magneticus RS-1] Length = 319 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 7/60 (11%) Query: 25 IAIKELIENSLDAESS----RVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 I L+ N+L ++ + G++ ++ D G G+ E +P T+K Sbjct: 220 QVILNLLTNAL--HATPEGGTITLATGRQNGRAVIEVRDTGCGIPPENLPKVFDPFFTTK 277 >gi|167957272|ref|ZP_02544346.1| DNA gyrase subunit B [candidate division TM7 single-cell isolate TM7c] Length = 114 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 IKE+ +NS+D A +++VE + GG +I+D+G G+ + Sbjct: 67 IKEIADNSIDEAIAGYATKVEVTLLEDGGA---RISDDGRGIPVD 108 >gi|163755156|ref|ZP_02162277.1| Histidine Kinase [Kordia algicida OT-1] gi|161325223|gb|EDP96551.1| Histidine Kinase [Kordia algicida OT-1] Length = 819 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 15/72 (20%) Query: 8 EKIINQIAAGEI-IERPSIAIKELIENSLDAESSRVETVIAGGG------------KSFF 54 I+ Q+ GE + A+ ELI+NS DA+++ V I G K F Sbjct: 11 PHIVKQL--GEQLVSDEITALLELIKNSYDADANYVSIEINTTGVYEKSKLFYPNHKGFI 68 Query: 55 QITDNGFGMTSE 66 + D+GFGM+ E Sbjct: 69 VVEDDGFGMSEE 80 >gi|172056050|ref|YP_001812510.1| DNA gyrase, B subunit [Exiguobacterium sibiricum 255-15] gi|171988571|gb|ACB59493.1| DNA gyrase, B subunit [Exiguobacterium sibiricum 255-15] Length = 643 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG G+ + Sbjct: 49 EIVDNSIDEALAGYCDTIKVTIEPG--NSILVEDNGRGIPVD 88 >gi|299541761|ref|ZP_07052084.1| DNA gyrase subunit B [Lysinibacillus fusiformis ZC1] gi|298725499|gb|EFI66140.1| DNA gyrase subunit B [Lysinibacillus fusiformis ZC1] Length = 644 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 23/40 (57%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + ++ I +++ ++ DNG G+ Sbjct: 52 EIVDNSIDEALAGFCTDIKVTIEK--ENWIRVEDNGRGIP 89 >gi|257454361|ref|ZP_05619624.1| DNA topoisomerase IV, B subunit [Enhydrobacter aerosaccus SK60] gi|257448264|gb|EEV23244.1| DNA topoisomerase IV, B subunit [Enhydrobacter aerosaccus SK60] Length = 629 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 15/81 (18%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EI 68 RP+ +E+I+NS+D A + + ++ G + D+G GM ++ I Sbjct: 29 TRPNHLAQEVIDNSVDEALAGHAKNITVILHTDG--SLSVEDDGRGMPTDIHPEFKQSGI 86 Query: 69 PMAVQR-HCTSKISDDFSNIH 88 + + R H K S D + Sbjct: 87 ELILTRLHAGGKFSTDNYQVS 107 >gi|238059301|ref|ZP_04604010.1| hsp90-like protein [Micromonospora sp. ATCC 39149] gi|237881112|gb|EEP69940.1| hsp90-like protein [Micromonospora sp. ATCC 39149] Length = 637 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 64/185 (34%), Gaps = 45/185 (24%) Query: 27 IKELIENSLDA--------------ESS----RVETVIAGGGKSFFQITDNGFGMTSEEI 68 ++ELI N+ DA + +E + ++ + DNG GM+ +++ Sbjct: 33 LRELISNASDALDKLRLESLVDKDLAADVSDLHIEIEVDRDARTL-TVRDNGIGMSRDDV 91 Query: 69 PMAVQRHCTS-------KISD--------DFSNIHTFGFRGEALPSIGAVS-HLTLMSRP 112 + S K+ + D GF + V+ +TL++R Sbjct: 92 VRLIGTIAKSGTAELLAKLRESKDTAASADLIGQFGVGF-----YATFMVADRVTLLTRR 146 Query: 113 PQNNTGAQIAISGEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV 171 G + +GE SV V GT V V P + + I ++ Sbjct: 147 AGEAEGTRWESTGEGTYSVETVDDAPQGTAVTVHLK----PEDSDDHLYDYTAEWKIREI 202 Query: 172 IRRMA 176 ++R + Sbjct: 203 VKRYS 207 >gi|29293589|gb|AAO67726.1| DNA gyrase subunit B [Mesoplasma photuris] Length = 549 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ + + G + DNG G+ Sbjct: 16 EIVDNSIDEALAGYATEINVTLEKNG--SVTVADNGRGVP 53 >gi|51317702|gb|AAT99972.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317704|gb|AAT99973.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317706|gb|AAT99974.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317708|gb|AAT99975.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317710|gb|AAT99976.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317712|gb|AAT99977.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317714|gb|AAT99978.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317716|gb|AAT99979.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317718|gb|AAT99980.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317720|gb|AAT99981.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317722|gb|AAT99982.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317724|gb|AAT99983.1| DNA gyrase subunit B [Borrelia hermsii] gi|112031371|gb|ABH88158.1| GyrB [Borrelia hermsii] gi|112031375|gb|ABH88160.1| GyrB [Borrelia hermsii] gi|164564666|gb|ABY61085.1| DNA gyrase B [Borrelia hermsii] gi|164564676|gb|ABY61090.1| DNA gyrase B [Borrelia hermsii] Length = 634 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 83/249 (33%), Gaps = 34/249 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IPMAVQR 74 + E+++NS+D A ++E VI + + DNG G+ EE + + + + Sbjct: 37 VYEVVDNSIDEALAGFCDKIEVVINSD--NSITVNDNGRGIPIDIHEEEGISALELVLTK 94 Query: 75 -HCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEK 127 H K + + + G G AL S AV ++SR + Sbjct: 95 LHSGGKFNKGTYKV-SGGLHGVGISVVNALSSFLAV----IVSRDGKLFKQTYSRGIPTS 149 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFS 187 + V+ GT V A ++ + + ++ +R +A K+ + Sbjct: 150 EVDIIGVSSARGTKVT-------FLADTEIFETLEYDFETLSKRLRELAFLNDKIRISIE 202 Query: 188 TIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNA 247 +S + K G + + + + + G+ G + Sbjct: 203 DKRSGKEKFLEFYFEGGIKAFVDYITNNSKNIQNEPYFIEGSCDDVIVSVGLKW-TEGYS 261 Query: 248 NQFYVFING 256 + F+N Sbjct: 262 DHILSFVNN 270 >gi|167757845|ref|ZP_02429972.1| hypothetical protein CLOSCI_00176 [Clostridium scindens ATCC 35704] gi|167664499|gb|EDS08629.1| hypothetical protein CLOSCI_00176 [Clostridium scindens ATCC 35704] Length = 1205 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 19/70 (27%) Query: 24 SIAI--KELIENSLDA----ESSR---------VETVIAGGGKSFFQITDNGFGMTSEEI 68 S + +ELI+NS+DA E+ +E + GK +F+I D G GM Sbjct: 641 SKVVFARELIQNSIDAISVREAKDERMFSKEILIEIKVDENGKRYFKIVDRGTGMDR--- 697 Query: 69 PMAVQRHCTS 78 ++R+ TS Sbjct: 698 -YKIERYFTS 706 >gi|148762477|dbj|BAF63940.1| DNA topoisomerase IV subunit B [Bacillus licheniformis] Length = 406 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I + + DNG G+ Sbjct: 13 EIVDNSIDEALAGYCTEINVAIEKD--NSITVKDNGRGIP 50 >gi|134291684|ref|YP_001115453.1| multi-sensor signal transduction histidine kinase [Burkholderia vietnamiensis G4] gi|134134873|gb|ABO59198.1| multi-sensor signal transduction histidine kinase [Burkholderia vietnamiensis G4] Length = 686 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 28/59 (47%), Gaps = 9/59 (15%) Query: 23 PSIAIKELIENSL-----DAESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRH 75 ++ L++N++ DA + +A G++ ++ D+G G+ +++ +R Sbjct: 571 LESMVRNLVDNAIRYSPADA---CITVSVARCDGRTTLRVEDSGPGIGDDDLRRLGERF 626 >gi|52783861|ref|YP_089690.1| DNA gyrase subunit B [Bacillus licheniformis ATCC 14580] gi|319648524|ref|ZP_08002740.1| DNA gyrase subunit B [Bacillus sp. BT1B_CT2] gi|52346363|gb|AAU38997.1| GyrB [Bacillus licheniformis ATCC 14580] gi|317389603|gb|EFV70414.1| DNA gyrase subunit B [Bacillus sp. BT1B_CT2] Length = 637 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I + + DNG G+ Sbjct: 43 EIVDNSIDEALAGYCTEINVAIEKD--NSITVKDNGRGIP 80 >gi|52078497|ref|YP_077288.1| DNA gyrase subunit B [Bacillus licheniformis ATCC 14580] gi|52001708|gb|AAU21650.1| DNA gyrase (subunit B) [Bacillus licheniformis ATCC 14580] Length = 639 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I + + DNG G+ Sbjct: 45 EIVDNSIDEALAGYCTEINVAIEKD--NSITVKDNGRGIP 82 >gi|298230621|ref|ZP_06964302.1| DNA gyrase subunit B [Streptococcus pneumoniae str. Canada MDR_19F] Length = 115 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|257054192|ref|YP_003132024.1| histidine kinase with GAF domain-containing protein [Saccharomonospora viridis DSM 43017] gi|256584064|gb|ACU95197.1| histidine kinase with GAF domain protein [Saccharomonospora viridis DSM 43017] Length = 385 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 12/72 (16%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVI--AGGGKSFFQITDNGFGM 63 + + + I A E S ++ + +S V + GG ++ DNG G+ Sbjct: 291 IPAERADHIRAALR-EALSNVVRH-------SGASEVRVTLRRDDGGLRL-RVRDNGCGV 341 Query: 64 TSEEIPMAVQRH 75 ++ RH Sbjct: 342 PR-DVEKRGLRH 352 >gi|209809295|ref|YP_002264833.1| signal transduction protein, histidine kinase [Aliivibrio salmonicida LFI1238] gi|208010857|emb|CAQ81258.1| signal transduction protein, histidine kinase [Aliivibrio salmonicida LFI1238] Length = 997 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 18 EIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E I AI EL +N+ DA++ V I G KS I DNGFGM + + T Sbjct: 21 EQIADCPTAISELWKNAYDADADEVALHILDGEKSIAAIVDNGFGMNASDFEEKWLTVGT 80 Query: 78 -SKISD 82 SKI Sbjct: 81 ESKIES 86 >gi|152992087|ref|YP_001357808.1| two-component sensor histidine kinase [Sulfurovum sp. NBC37-1] gi|151423948|dbj|BAF71451.1| two-component sensor histidine kinase [Sulfurovum sp. NBC37-1] Length = 339 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 11/57 (19%) Query: 26 AIKELIENSL----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 +K LIEN+L D + I + D G G++ +++ ++ S Sbjct: 247 VLKNLIENALKYSKD----TITVRIDE---DRISVIDKGTGISEKDLGKVTKKFYRS 296 >gi|48478486|ref|YP_024192.1| DNA gyrase subunit B [Picrophilus torridus DSM 9790] gi|48431134|gb|AAT43999.1| DNA gyrase subunit B [Picrophilus torridus DSM 9790] Length = 646 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 24/235 (10%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM------ 70 E + E+I+NS+D A S + +I G + D+G G+ + P Sbjct: 32 EGLHHMVYEVIDNSIDESMAGFCSNIYIIIYKDG--SISVEDDGRGIPVDMHPKYKRPGL 89 Query: 71 ---AVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGE 126 + H +K + + T G G + + A+S L + + + Sbjct: 90 EIVLTELHSGAKFDKNVYKV-TGGLHGVGVHVVNALSDYLEAIVKKNDKLYIEKFERGLP 148 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVE------TNLITDVIRRMAIAYP 180 + TI +V+ + F Q+ +I R++A P Sbjct: 149 VTKMEELDYIMASTIKDVKIKLANHGTIIKFHPDPQIFDVRDFSYEIIAGRCRQLAFLNP 208 Query: 181 KVSFTFSTIK-SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 +V+ T + S + +F F + IS + + E E+ + Sbjct: 209 QVTITVEDERTSKKETYHFTGGLSEFVKYISSNKDPVYKDPIYYSTEIEKEVHNE 263 >gi|84517076|ref|ZP_01004432.1| C4-dicarboxylate transport sensor protein DctB, putative [Loktanella vestfoldensis SKA53] gi|84508971|gb|EAQ05432.1| C4-dicarboxylate transport sensor protein DctB, putative [Loktanella vestfoldensis SKA53] Length = 584 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Query: 22 RPSIAIKELIENSLDAESS----RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 R I L+ N+LDA + +E ++A G QI DNG G+ E + + T Sbjct: 474 RLEQVIINLLRNALDATKTSDNPTIEILLAVGDTVSLQIRDNGEGI--ENLDELFEPFYT 531 Query: 78 SK 79 +K Sbjct: 532 TK 533 >gi|260910948|ref|ZP_05917589.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella sp. oral taxon 472 str. F0295] gi|260634939|gb|EEX52988.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella sp. oral taxon 472 str. F0295] Length = 657 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 6/49 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 + E ++NS+D A S +E I + + D+G G+ +E Sbjct: 45 VNETVDNSIDEAMAGYCSSIEVTINED--NSITVQDDGRGIPVDEHEKL 91 >gi|193216997|ref|YP_002000239.1| DNA gyrase subunit B [Mycoplasma arthritidis 158L3-1] gi|193002320|gb|ACF07535.1| DNA gyrase subunit B [Mycoplasma arthritidis 158L3-1] Length = 647 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ +E + + ++ DNG GM + Sbjct: 46 EIVDNSVDEAMAGFATNIEVKLHPN--NEIEVIDNGRGMPVD 85 >gi|167750379|ref|ZP_02422506.1| hypothetical protein EUBSIR_01353 [Eubacterium siraeum DSM 15702] gi|167656739|gb|EDS00869.1| hypothetical protein EUBSIR_01353 [Eubacterium siraeum DSM 15702] Length = 581 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 11/57 (19%) Query: 29 ELIEN----SL----DAESSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHC 76 EL+EN ++ D RVE + G + DNG G+ E + +R Sbjct: 472 ELVENIVSNAIKYNKDGG--RVEITLHDVGETGCIYVRDNGIGIPKESLNRVFERFY 526 >gi|325954875|ref|YP_004238535.1| DNA gyrase subunit beta [Weeksella virosa DSM 16922] gi|323437493|gb|ADX67957.1| DNA gyrase, B subunit [Weeksella virosa DSM 16922] Length = 671 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + I G + ++DNG G+ + Sbjct: 67 VYEVVDNSIDEALAGFCDTISVKILEG--NSISVSDNGRGIPVD 108 >gi|241554082|ref|YP_002979295.1| HSP90 family molecular chaperone-like protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863388|gb|ACS61050.1| HSP90 family molecular chaperone-like protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 522 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 21/122 (17%) Query: 22 RPSIAIKELIENSLDA-------------ESSRVETVIAGGGKSFFQITDNGFGMTSEEI 68 P +E ++NS DA E+ +V I +S +I DNG G+++E+ Sbjct: 46 DPMTIYREYVQNSADAIDDARSRGLISAEEAGKVLITIDPMTRS-IRIRDNGSGLSNEDF 104 Query: 69 -PMAVQRHCTSKISDDFSNIHTFGFRGEA-LPSIGAVSHLTLMSRPPQNNTGAQIAISGE 126 + K + GFRG L +G L SR +++ A++ + Sbjct: 105 SRKMAALGASGK-----RGTNARGFRGVGRLAGLGYAQELVFRSRTASDDSVAELTWDCK 159 Query: 127 KI 128 ++ Sbjct: 160 RL 161 >gi|197123331|ref|YP_002135282.1| DNA topoisomerase VI subunit B [Anaeromyxobacter sp. K] gi|196173180|gb|ACG74153.1| DNA topoisomerase VI, B subunit [Anaeromyxobacter sp. K] Length = 689 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 57/194 (29%), Gaps = 48/194 (24%) Query: 27 IKELIENSLDA--ESS---RVETVIAGGGKS--------------FFQITDNGFGMTSEE 67 IKE ++NSLDA E+ + + G + DNG G+ + Sbjct: 119 IKEAVDNSLDACEEAGILPEITIEVRDLGLDDKGEGELTKGEGRFVVVVEDNGPGIVKAQ 178 Query: 68 IPMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVSHLT------LMSRPPQNNTG-- 118 P + SK + G +G + + LT ++SR + Sbjct: 179 APKIFGKLLYGSKFH---RLKQSRGQQGIGISAAAMYGQLTTGQPIRMISRTGKGKPAFG 235 Query: 119 ------AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 + GT VE+ + + Q + + Sbjct: 236 LEIQIDTRKNNPVVTAERQLDDWHEHGTRVELEIV-----------ANWQQGQRFVNRYV 284 Query: 173 RRMAIAYPKVSFTF 186 A++ P +F + Sbjct: 285 EHTALSNPHAAFHY 298 >gi|291532646|emb|CBL05759.1| DNA gyrase subunit B [Megamonas hypermegale ART12/1] Length = 665 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I + +TDNG G+ + Sbjct: 72 VYEVVDNSIDEALAGYCTHIEVTIHKD--NSITVTDNGRGIPVD 113 >gi|150400870|ref|YP_001324636.1| DNA topoisomerase VI subunit B [Methanococcus aeolicus Nankai-3] gi|150013573|gb|ABR56024.1| DNA topoisomerase VI, B subunit [Methanococcus aeolicus Nankai-3] Length = 662 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Query: 25 IAIKELIENSLDA--ESS---RVETVIAGGGKSF--FQITDNGFGMTSEEIPMAV 72 I ELI NSLDA E+ ++ I G + DNG G+ E +P Sbjct: 39 TIIHELITNSLDACEEAEILPDIDITIKKLGSDHYHISVEDNGPGIPPEFVPKVF 93 >gi|77456232|ref|YP_345737.1| DNA gyrase subunit B [Pseudomonas fluorescens Pf0-1] gi|77380235|gb|ABA71748.1| DNA gyrase subunit B [Pseudomonas fluorescens Pf0-1] Length = 805 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 72/247 (29%), Gaps = 26/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDISIIIHPD--ESITVKDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+S L L R + + + Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEELVLTVRRSG--KIWEQTYVHGVPQAPMAI 158 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 + T A K+ +++ IR ++ V +S + Sbjct: 159 VGDSETTGTQIHF----KASSETFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKE 214 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 ++ G + + N V E + + N F Sbjct: 215 ELFKY--EGGLRAFVEYLNTNKTAVNQVFHFNIQREDGIGVEIALQW-NDSFNENLLCFT 271 Query: 255 NGRTVQD 261 N +D Sbjct: 272 NNIPQRD 278 >gi|320546739|ref|ZP_08041050.1| sensor histidine kinase [Streptococcus equinus ATCC 9812] gi|320448618|gb|EFW89350.1| sensor histidine kinase [Streptococcus equinus ATCC 9812] Length = 314 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 9/52 (17%) Query: 30 LIENSL----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 LI+N++ D ++ I G +I+DNG G+ E++P + T Sbjct: 221 LIDNAIKYSKDGG--KISIQITKG---CIEISDNGIGILEEDLPRIFEEGFT 267 >gi|313157284|gb|EFR56710.1| DNA gyrase, B subunit [Alistipes sp. HGB5] Length = 653 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + ++ I + + DNG G+ ++ Sbjct: 49 VYEVVDNSIDEALAGYCTDIDVTINED--NSITVRDNGRGIPTD 90 >gi|291513912|emb|CBK63122.1| DNA gyrase subunit B [Alistipes shahii WAL 8301] Length = 652 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + ++ I + + DNG G+ ++ Sbjct: 49 VYEVVDNSIDEALAGYCTDIDVTINED--NSITVRDNGRGIPTD 90 >gi|229530199|ref|ZP_04419588.1| DNA gyrase subunit B [Vibrio cholerae 12129(1)] gi|229332332|gb|EEN97819.1| DNA gyrase subunit B [Vibrio cholerae 12129(1)] Length = 805 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 81/246 (32%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + I + ++D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGYCKDIVVTIHED--NSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L++ +Q G + + V Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKVLLTIYRGGKIHSQTYHHGVPQAPLAVVG 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T VR P+ F + + +++ +R ++ VS + + K Sbjct: 159 DTERTGTTVRF----WPSAQTFT-NIEFHYDILAKRLRELSFLNSGVSIKLTDEREEDKK 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 +F G ++ + + + +N G Y F N Sbjct: 214 DHFMYEGG-IQAFVTHLNRNKTPIHEKVFHFNQEREDGISVEVAMQWNDGFQENIYCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|226364316|ref|YP_002782098.1| two-component histidine kinase [Rhodococcus opacus B4] gi|226242805|dbj|BAH53153.1| putative two-component histidine kinase [Rhodococcus opacus B4] Length = 521 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 20/84 (23%) Query: 30 LIENSLDA--ESS-------RVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N++DA ++ VE + Q+ D+G G+ ++E+ AV R ++K Sbjct: 419 LVDNAIDAARGAAGSPGEDAWVEVTVRQEDSTMVVQVADSGPGIPADELDKAVTRGYSTK 478 Query: 80 ISDDFSNIHTFGFRGEALPSIGAV 103 G RG L + V Sbjct: 479 ----------SGQRGLGLALVAQV 492 >gi|152999325|ref|YP_001365006.1| DNA topoisomerase IV subunit B [Shewanella baltica OS185] gi|151363943|gb|ABS06943.1| DNA topoisomerase IV, B subunit [Shewanella baltica OS185] Length = 628 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 81/212 (38%), Gaps = 29/212 (13%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EIP 69 RP+ +E+I+NS+D A ++++E V+ + ++TD+G GM + + Sbjct: 31 RPNHLGQEVIDNSVDEALAGHATKIEVVLHTD--NSLEVTDDGRGMPVDIHLEEGIPGVE 88 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAISG 125 + + + H K S+ + G G + + A+S + + R + + Sbjct: 89 LILTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSRRVEVTVRRDGQVYDIAFENGFKV 147 Query: 126 EKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF 184 E++ N GT V ++ S + + ++R A+ P + Sbjct: 148 EELRPTGTCGRRNTGTRVHFW-------PDASYFDSANFSNSKLIYLLRAKAVLCPGLRI 200 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQVIGED 216 F+ +++ + + IG++ Sbjct: 201 KFTN--KQTNEVHEWFYESGLTDYLKAAIGDN 230 >gi|126338505|ref|XP_001373060.1| PREDICTED: similar to MORC family CW-type zinc finger protein 2 (Zinc finger CW-type coiled-coil domain protein 1) [Monodelphis domestica] Length = 979 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DAE++R++ GG + D+G GM + +Q ++K + + Sbjct: 35 ELLDNARDAEATRIDIYAEYRENLQGGFMLCFL-DDGTGMDPSDAASVIQFGKSAKRTPE 93 Query: 84 FSNIHTFG 91 + I +G Sbjct: 94 STQIGQYG 101 >gi|19909597|dbj|BAB86994.1| DNA gyrase subunit B [Halomonas cupida] Length = 454 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 EL++NS+D A + + +I ++DNG G+ ++ Sbjct: 8 ELVDNSIDEALAGHCTEIRVIIHPD--ESVTVSDNGRGIPTD 47 >gi|87121093|ref|ZP_01076984.1| Histidine Kinase [Marinomonas sp. MED121] gi|86163585|gb|EAQ64859.1| Histidine Kinase [Marinomonas sp. MED121] Length = 701 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 7/56 (12%) Query: 29 ELIENSLDAESSRVETVIAG----GGKSFFQITDNGFGMTSEEIPMA-VQRHCTSK 79 EL+ N+ DA++ + GG I D+G GM + I + + +SK Sbjct: 35 ELVRNAYDADAQNCTVTLNNINHPGG--SIVIEDDGCGMDEDVISKSWLVLGHSSK 88 >gi|254237753|ref|ZP_04931076.1| DNA gyrase subunit B [Pseudomonas aeruginosa C3719] gi|126169684|gb|EAZ55195.1| DNA gyrase subunit B [Pseudomonas aeruginosa C3719] Length = 806 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 76/247 (30%), Gaps = 25/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A S + I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGYCSEISITIHTD--ESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+SH L L R Q+ G +R V Sbjct: 102 AGGKFDDNTYKV-SGGLHGVGVSVVNALSHELRLTIRRHN-KVWEQVYHHGVPQFPLREV 159 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 G+ EV + +++ IR ++ V ++ + Sbjct: 160 GETDGSGTEVH-----FKPSPETFSNIHFSWDILAKRIRELSFLNSGVGILLRDERTGKE 214 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 ++ G + + N V E G +N F Sbjct: 215 ELFKY--EGGLKAFVEYLNTNKTAVNEVFHFNVQREEDGVGVEVALQWNDSFNENLLCFT 272 Query: 255 NGRTVQD 261 N +D Sbjct: 273 NNIPQRD 279 >gi|15595202|ref|NP_064724.1| DNA gyrase subunit B [Pseudomonas aeruginosa PAO1] gi|107098998|ref|ZP_01362916.1| hypothetical protein PaerPA_01000004 [Pseudomonas aeruginosa PACS2] gi|116053724|ref|YP_788159.1| DNA gyrase subunit B [Pseudomonas aeruginosa UCBPP-PA14] gi|218888750|ref|YP_002437614.1| DNA gyrase subunit B [Pseudomonas aeruginosa LESB58] gi|296386476|ref|ZP_06875975.1| DNA gyrase subunit B [Pseudomonas aeruginosa PAb1] gi|313111474|ref|ZP_07797275.1| DNA gyrase subunit B [Pseudomonas aeruginosa 39016] gi|81857426|sp|Q9I7C2|GYRB_PSEAE RecName: Full=DNA gyrase subunit B gi|9945822|gb|AAG03394.1|AE004440_4 DNA gyrase subunit B [Pseudomonas aeruginosa PAO1] gi|115588945|gb|ABJ14960.1| DNA gyrase subunit B [Pseudomonas aeruginosa UCBPP-PA14] gi|218768973|emb|CAW24731.1| DNA gyrase subunit B [Pseudomonas aeruginosa LESB58] gi|310883777|gb|EFQ42371.1| DNA gyrase subunit B [Pseudomonas aeruginosa 39016] Length = 806 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 76/247 (30%), Gaps = 25/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A S + I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGYCSEISITIHTD--ESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+SH L L R Q+ G +R V Sbjct: 102 AGGKFDDNTYKV-SGGLHGVGVSVVNALSHELRLTIRRHN-KVWEQVYHHGVPQFPLREV 159 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 G+ EV + +++ IR ++ V ++ + Sbjct: 160 GETDGSGTEVH-----FKPSPETFSNIHFSWDILAKRIRELSFLNSGVGILLRDERTGKE 214 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 ++ G + + N V E G +N F Sbjct: 215 ELFKY--EGGLKAFVEYLNTNKTAVNEVFHFNVQREEDGVGVEVALQWNDSFNENLLCFT 272 Query: 255 NGRTVQD 261 N +D Sbjct: 273 NNIPQRD 279 >gi|327284259|ref|XP_003226856.1| PREDICTED: LOW QUALITY PROTEIN: MORC family CW-type zinc finger protein 2-like [Anolis carolinensis] Length = 1029 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ GG + D+G GM + +Q ++K S + Sbjct: 35 ELVDNARDADATRIDIFTERREGLRGGFMLCFL-DDGAGMDEHDAASVIQFGKSAKRSPE 93 Query: 84 FSNIHTFG 91 + I +G Sbjct: 94 STQIGQYG 101 >gi|326533942|dbj|BAJ93744.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 120 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Query: 32 ENSLDAESSRVETVIAGGGKSFFQITDNGFGM 63 EN ++A+SS + + GG Q++D+G + Sbjct: 78 EN-INADSSTISITVNDGGLKLIQVSDDGHDI 108 >gi|106734231|gb|ABF82592.1| DNA topoisomerase IV subunit beta [Exiguobacterium oxidotolerans] Length = 489 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG G+ + Sbjct: 21 EIVDNSIDEALAGYCDTIKVTIEPG--NSILVEDNGRGIPID 60 >gi|255535639|ref|YP_003096010.1| DNA gyrase subunit B [Flavobacteriaceae bacterium 3519-10] gi|255341835|gb|ACU07948.1| DNA gyrase subunit B [Flavobacteriaceae bacterium 3519-10] Length = 644 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + VI G + DNG G+ + Sbjct: 40 VYEVVDNSIDEALAGHCDTISVVIHEG--ESISVKDNGRGIPVD 81 >gi|172064152|ref|YP_001811803.1| integral membrane sensor signal transduction histidine kinase [Burkholderia ambifaria MC40-6] gi|171996669|gb|ACB67587.1| integral membrane sensor signal transduction histidine kinase [Burkholderia ambifaria MC40-6] Length = 440 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Query: 20 IERPSI---AIKELIENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 + RP + L++N+L A ++ ++ A GG + + D G G+ +++ + Sbjct: 328 VTRPKALRRIVGNLVDNALKFAGAAEIDVQAASGGGAVIAVRDRGPGIPDDQLDAVFEPF 387 >gi|170698564|ref|ZP_02889633.1| integral membrane sensor signal transduction histidine kinase [Burkholderia ambifaria IOP40-10] gi|170136498|gb|EDT04757.1| integral membrane sensor signal transduction histidine kinase [Burkholderia ambifaria IOP40-10] Length = 440 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Query: 20 IERPSI---AIKELIENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 + RP + L++N+L A ++ ++ A GG + + D G G+ +++ + Sbjct: 328 VTRPKALRRIVGNLVDNALKFAGAAEIDVQAASGGGAVIAVRDRGPGIPDDQLDAVFEPF 387 >gi|115359359|ref|YP_776497.1| periplasmic sensor signal transduction histidine kinase [Burkholderia ambifaria AMMD] gi|115284647|gb|ABI90163.1| periplasmic sensor signal transduction histidine kinase [Burkholderia ambifaria AMMD] Length = 440 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Query: 20 IERPSI---AIKELIENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 + RP + L++N+L A ++ ++ A GG + + D G G+ +++ + Sbjct: 328 VTRPKALRRIVGNLVDNALKFAGAAEIDVQAASGGGAVIAVRDRGPGIPDDQLDAVFEPF 387 >gi|15640047|ref|NP_062599.1| DNA gyrase subunit B [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121727887|ref|ZP_01680946.1| DNA gyrase, subunit B [Vibrio cholerae V52] gi|147673680|ref|YP_001218397.1| DNA gyrase subunit B [Vibrio cholerae O395] gi|153819850|ref|ZP_01972517.1| DNA gyrase, subunit B [Vibrio cholerae NCTC 8457] gi|153821919|ref|ZP_01974586.1| DNA gyrase, subunit B [Vibrio cholerae B33] gi|227080252|ref|YP_002808803.1| DNA gyrase, subunit B [Vibrio cholerae M66-2] gi|229508300|ref|ZP_04397804.1| DNA gyrase subunit B [Vibrio cholerae BX 330286] gi|229508861|ref|ZP_04398352.1| DNA gyrase subunit B [Vibrio cholerae B33] gi|229517132|ref|ZP_04406578.1| DNA gyrase subunit B [Vibrio cholerae RC9] gi|229606574|ref|YP_002877222.1| DNA gyrase subunit B [Vibrio cholerae MJ-1236] gi|254851580|ref|ZP_05240930.1| DNA gyrase subunit B [Vibrio cholerae MO10] gi|255746803|ref|ZP_05420749.1| DNA gyrase subunit B [Vibrio cholera CIRS 101] gi|262155882|ref|ZP_06029004.1| DNA gyrase subunit B [Vibrio cholerae INDRE 91/1] gi|262167103|ref|ZP_06034818.1| DNA gyrase subunit B [Vibrio cholerae RC27] gi|298501200|ref|ZP_07010999.1| DNA gyrase, B subunit [Vibrio cholerae MAK 757] gi|11386840|sp|Q9KVX3|GYRB_VIBCH RecName: Full=DNA gyrase subunit B gi|9654406|gb|AAF93193.1| DNA gyrase, subunit B [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121629831|gb|EAX62246.1| DNA gyrase, subunit B [Vibrio cholerae V52] gi|126509611|gb|EAZ72205.1| DNA gyrase, subunit B [Vibrio cholerae NCTC 8457] gi|126520539|gb|EAZ77762.1| DNA gyrase, subunit B [Vibrio cholerae B33] gi|146315563|gb|ABQ20102.1| DNA gyrase, subunit B [Vibrio cholerae O395] gi|227008140|gb|ACP04352.1| DNA gyrase, subunit B [Vibrio cholerae M66-2] gi|227011982|gb|ACP08192.1| DNA gyrase, subunit B [Vibrio cholerae O395] gi|229346195|gb|EEO11167.1| DNA gyrase subunit B [Vibrio cholerae RC9] gi|229354136|gb|EEO19068.1| DNA gyrase subunit B [Vibrio cholerae B33] gi|229354573|gb|EEO19495.1| DNA gyrase subunit B [Vibrio cholerae BX 330286] gi|229369229|gb|ACQ59652.1| DNA gyrase subunit B [Vibrio cholerae MJ-1236] gi|254847285|gb|EET25699.1| DNA gyrase subunit B [Vibrio cholerae MO10] gi|255735560|gb|EET90959.1| DNA gyrase subunit B [Vibrio cholera CIRS 101] gi|262024489|gb|EEY43175.1| DNA gyrase subunit B [Vibrio cholerae RC27] gi|262030334|gb|EEY48976.1| DNA gyrase subunit B [Vibrio cholerae INDRE 91/1] gi|297540072|gb|EFH76134.1| DNA gyrase, B subunit [Vibrio cholerae MAK 757] Length = 805 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 81/246 (32%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + I + ++D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGYCKDIVVTIHED--NSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L++ +Q G + + V Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKVLLTIYRGGKIHSQTYHHGVPQAPLAVVG 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T VR P+ F + + +++ +R ++ VS + + K Sbjct: 159 ETERTGTTVRF----WPSAQTFT-NIEFHYDILAKRLRELSFLNSGVSIKLTDEREEDKK 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 +F G ++ + + + +N G Y F N Sbjct: 214 DHFMYEGG-IQAFVTHLNRNKTPIHEKVFHFNQEREDGISVEVAMQWNDGFQENIYCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|289596417|ref|YP_003483113.1| DNA topoisomerase VI, B subunit [Aciduliprofundum boonei T469] gi|289534204|gb|ADD08551.1| DNA topoisomerase VI, B subunit [Aciduliprofundum boonei T469] Length = 663 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 7/53 (13%) Query: 27 IKELIENSLDA--ESS---RVETVIAGGGKS--FFQITDNGFGMTSEEIPMAV 72 +KE ++NSLDA E+ + I K + DNG G+ IP+ Sbjct: 56 VKEAVDNSLDACEEAEILPDIYVEIQNVSKDEYKIIVEDNGPGIIRRNIPLVF 108 >gi|254166785|ref|ZP_04873639.1| DNA topoisomerase VI, B subunit [Aciduliprofundum boonei T469] gi|197624395|gb|EDY36956.1| DNA topoisomerase VI, B subunit [Aciduliprofundum boonei T469] Length = 681 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 7/53 (13%) Query: 27 IKELIENSLDA--ESS---RVETVIAGGGKS--FFQITDNGFGMTSEEIPMAV 72 +KE ++NSLDA E+ + I K + DNG G+ IP+ Sbjct: 74 VKEAVDNSLDACEEAEILPDIYVEIQNVSKDEYKIIVEDNGPGIIRRNIPLVF 126 >gi|254167389|ref|ZP_04874241.1| DNA topoisomerase VI, B subunit [Aciduliprofundum boonei T469] gi|197623652|gb|EDY36215.1| DNA topoisomerase VI, B subunit [Aciduliprofundum boonei T469] Length = 680 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 7/53 (13%) Query: 27 IKELIENSLDA--ESS---RVETVIAGGGKS--FFQITDNGFGMTSEEIPMAV 72 +KE ++NSLDA E+ + I K + DNG G+ IP+ Sbjct: 73 VKEAVDNSLDACEEAEILPDIYVEIQNVSKDEYKIIVEDNGPGIIRRNIPLVF 125 >gi|218440010|ref|YP_002378339.1| XRE family transcriptional regulator [Cyanothece sp. PCC 7424] gi|218172738|gb|ACK71471.1| transcriptional regulator, XRE family [Cyanothece sp. PCC 7424] Length = 1191 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 39 VYEVVDNSIDEALAGYCTHIEVDINSDG--SVTVTDDGRGIPTD 80 >gi|148691971|gb|EDL23918.1| microrchidia 4, isoform CRA_a [Mus musculus] Length = 1005 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + K TD+G GMT ++ + T Sbjct: 141 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKKKPCLTFTDDGCGMTPHKLHRMLSFGFT 200 Query: 78 SK 79 K Sbjct: 201 DK 202 >gi|94992112|ref|YP_600211.1| DNA gyrase subunit B [Streptococcus pyogenes MGAS2096] gi|94545620|gb|ABF35667.1| DNA gyrase subunit B [Streptococcus pyogenes MGAS2096] Length = 651 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 24/48 (50%), Gaps = 7/48 (14%) Query: 24 SIA-IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + + E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 46 ASISVWEIVDNSIDEALAGFASHIKVFIEAD--NSITVVDDGRGIPVD 91 >gi|304383575|ref|ZP_07366034.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella marshii DSM 16973] gi|304335099|gb|EFM01370.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella marshii DSM 16973] Length = 657 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 6/49 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 + E ++NS+D A +E +I + + D+G G+ +E Sbjct: 45 VNETVDNSIDEAMAGFCKNIEVIINED--NSITVQDDGRGIPVDEHEKL 91 >gi|87310228|ref|ZP_01092359.1| sensor histidine kinase [Blastopirellula marina DSM 3645] gi|87286977|gb|EAQ78880.1| sensor histidine kinase [Blastopirellula marina DSM 3645] Length = 499 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 9/64 (14%) Query: 20 IERPSIAIKELIENSLDAESS----RVETVIA---GGGKSFFQITDNGFGMTSEEIPMAV 72 +E + L++N++ + + R++ +I I DNG G+ E+ Sbjct: 361 VEHLRQVVNNLLDNAI--KFTPEGGRIDVLIEKSADNSTVELSIADNGCGIREEDHEKVF 418 Query: 73 QRHC 76 +R Sbjct: 419 ERFY 422 >gi|291003233|ref|ZP_06561206.1| putative two-component system sensor kinase [Saccharopolyspora erythraea NRRL 2338] Length = 533 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 11/69 (15%) Query: 18 EIIERPSIAIKELIENSLDA---ESSR---VETVIAGGGKSF-FQITDNGFGMTSEEIPM 70 E++ + L++N++DA S R VE + G + + DNG G++ Sbjct: 411 EVVT----VVGNLVDNAIDAARTGSRRPARVEVDLLADGTTLHVSVVDNGDGVSEALRER 466 Query: 71 AVQRHCTSK 79 +SK Sbjct: 467 IFTEGVSSK 475 >gi|134098550|ref|YP_001104211.1| putative two-component system sensor kinase [Saccharopolyspora erythraea NRRL 2338] gi|133911173|emb|CAM01286.1| putative two-component system sensor kinase [Saccharopolyspora erythraea NRRL 2338] Length = 538 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 11/69 (15%) Query: 18 EIIERPSIAIKELIENSLDA---ESSR---VETVIAGGGKSF-FQITDNGFGMTSEEIPM 70 E++ + L++N++DA S R VE + G + + DNG G++ Sbjct: 416 EVVT----VVGNLVDNAIDAARTGSRRPARVEVDLLADGTTLHVSVVDNGDGVSEALRER 471 Query: 71 AVQRHCTSK 79 +SK Sbjct: 472 IFTEGVSSK 480 >gi|296330042|ref|ZP_06872526.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672704|ref|YP_003864375.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii str. W23] gi|296153081|gb|EFG93946.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305410947|gb|ADM36065.1| DNA gyrase subunit B [Bacillus subtilis subsp. spizizenii str. W23] Length = 638 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I + + DNG G+ Sbjct: 44 EIVDNSIDEALAGYCTDINIQIEKD--NSITVIDNGRGIP 81 >gi|269128403|ref|YP_003301773.1| ATP-binding region ATPase domain-containing protein [Thermomonospora curvata DSM 43183] gi|268313361|gb|ACY99735.1| ATP-binding region ATPase domain protein [Thermomonospora curvata DSM 43183] Length = 589 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 31/138 (22%) Query: 27 IKELIENSLDA-----ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT---- 77 ++EL++N++DA RV G G ++ D+G G+T EE+ + T Sbjct: 29 LRELLQNAVDAITARGGGGRVRIETDGAGT--LRVHDDGVGLTEEEVHRLL---ATIGRS 83 Query: 78 SKISDDFSNIHTFGF-R-------GEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKI 128 SK + GF R G L S V+ + +++R + + Sbjct: 84 SKRDE-------LGFARHDFLGQFGIGLLSAFLVADEIEVVTRSARGGPAVTWTGYADGR 136 Query: 129 SSVRPVAM-NPGTIVEVR 145 V P GT V +R Sbjct: 137 YRVGPGRREEAGTTVTLR 154 >gi|146280548|ref|YP_001170701.1| sensor histidine kinase [Pseudomonas stutzeri A1501] gi|145568753|gb|ABP77859.1| sensor histidine kinase [Pseudomonas stutzeri A1501] Length = 627 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAES----SRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + R+ + G + DNG G+ E++ + Sbjct: 517 RLEQVLINLLHNALDAMAERPQRRLRILCERAGDAWQLSVADNGGGIPGEQLDQVFEPFF 576 Query: 77 TSK 79 T+K Sbjct: 577 TTK 579 >gi|306827658|ref|ZP_07460937.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus pyogenes ATCC 10782] gi|304430139|gb|EFM33169.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus pyogenes ATCC 10782] Length = 650 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIKVFIEAD--NSITVVDDGRGIPVD 90 >gi|301166575|emb|CBW26151.1| chaperone protein (heat shock protein) [Bacteriovorax marinus SJ] Length = 645 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 47/151 (31%), Gaps = 36/151 (23%) Query: 27 IKELIENSLDA------ESSRVETVIAGGGK--------SFFQITDNGFGMTSEEIPMAV 72 I+EL+ N+ DA S + I G I+DNG GM+ +I + Sbjct: 31 IRELVANATDAITKRHTLSRNLNVEIPQGSINISVNKDNKLITISDNGLGMSEADIEKYI 90 Query: 73 QRHCTS-------KISD-------DFSNIHTFGFRGEALPSIGAVS-HLTLMS-RPPQNN 116 + S K+ D D GF S V+ + + S + Sbjct: 91 AQLAFSGAEEFVKKLKDEGAEDGQDIIGKFGLGF-----YSAFMVADKVEIESLSMNEGA 145 Query: 117 TGAQIAISGEKISSVRPVAMNP-GTIVEVRD 146 + G+ + GT + + Sbjct: 146 KATKWICEGDTEYTFTDSTKETIGTTIYLHI 176 >gi|209559109|ref|YP_002285581.1| DNA gyrase subunit B [Streptococcus pyogenes NZ131] gi|209540310|gb|ACI60886.1| DNA gyrase subunit B [Streptococcus pyogenes NZ131] Length = 650 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIKVFIEAD--NSITVVDDGRGIPVD 90 >gi|139474074|ref|YP_001128790.1| DNA gyrase subunit B [Streptococcus pyogenes str. Manfredo] gi|134272321|emb|CAM30575.1| DNA gyrase subunit B [Streptococcus pyogenes str. Manfredo] Length = 650 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIKVFIEAD--NSITVVDDGRGIPVD 90 >gi|94994032|ref|YP_602130.1| DNA gyrase subunit B [Streptococcus pyogenes MGAS10750] gi|94547540|gb|ABF37586.1| DNA gyrase subunit B [Streptococcus pyogenes MGAS10750] Length = 650 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIKVFIEAD--NSITVVDDGRGIPVD 90 >gi|94988237|ref|YP_596338.1| DNA gyrase subunit B [Streptococcus pyogenes MGAS9429] gi|94541745|gb|ABF31794.1| DNA gyrase subunit B [Streptococcus pyogenes MGAS9429] Length = 650 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIKVFIEAD--NSITVVDDGRGIPVD 90 >gi|91214973|ref|ZP_01251945.1| sensor histidine kinase [Psychroflexus torquis ATCC 700755] gi|91186578|gb|EAS72949.1| sensor histidine kinase [Psychroflexus torquis ATCC 700755] Length = 359 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Query: 21 ERPSIAIKELIENSLD----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 ER I LI NS+ +S + GGK F++TDNG G+ E IP +R Sbjct: 236 ERIQQVITNLIVNSIKYGKKGGTSEISLEQLEGGKVMFRVTDNGEGIEKENIPRLFERF 294 >gi|71903198|ref|YP_280001.1| DNA gyrase subunit B [Streptococcus pyogenes MGAS6180] gi|71802293|gb|AAX71646.1| DNA gyrase subunit B [Streptococcus pyogenes MGAS6180] Length = 650 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIKVFIEAD--NSITVVDDGRGIPVD 90 >gi|21904202|gb|AAM79083.1| putative DNA gyrase, subunit B [Streptococcus pyogenes MGAS315] Length = 620 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 21 EIVDNSIDEALAGFASHIKVFIEAD--NSITVVDDGRGIPVD 60 >gi|15674782|ref|NP_268956.1| DNA gyrase subunit B [Streptococcus pyogenes M1 GAS] gi|71910366|ref|YP_281916.1| DNA gyrase subunit B [Streptococcus pyogenes MGAS5005] gi|73919732|sp|Q9A0L0|GYRB_STRP1 RecName: Full=DNA gyrase subunit B gi|13621909|gb|AAK33677.1| putative DNA gyrase, subunit B [Streptococcus pyogenes M1 GAS] gi|71853148|gb|AAZ51171.1| DNA gyrase subunit B [Streptococcus pyogenes MGAS5005] Length = 650 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIKVFIEAD--NSITVVDDGRGIPVD 90 >gi|19745824|ref|NP_606960.1| DNA gyrase subunit B [Streptococcus pyogenes MGAS8232] gi|50913919|ref|YP_059891.1| DNA gyrase subunit B [Streptococcus pyogenes MGAS10394] gi|73919730|sp|Q5XD05|GYRB_STRP6 RecName: Full=DNA gyrase subunit B gi|73919731|sp|Q8P1M4|GYRB_STRP8 RecName: Full=DNA gyrase subunit B gi|19747970|gb|AAL97459.1| putative DNA gyrase, subunit B [Streptococcus pyogenes MGAS8232] gi|50902993|gb|AAT86708.1| DNA gyrase subunit B [Streptococcus pyogenes MGAS10394] Length = 650 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIKVFIEAD--NSITVVDDGRGIPVD 90 >gi|28896290|ref|NP_802640.1| DNA gyrase subunit B [Streptococcus pyogenes SSI-1] gi|161485752|ref|NP_664280.2| DNA gyrase subunit B [Streptococcus pyogenes MGAS315] gi|73919729|sp|Q8K840|GYRB_STRP3 RecName: Full=DNA gyrase subunit B gi|28811541|dbj|BAC64473.1| putative DNA gyrase B subunit [Streptococcus pyogenes SSI-1] Length = 650 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIKVFIEAD--NSITVVDDGRGIPVD 90 >gi|261213260|ref|ZP_05927542.1| DNA gyrase subunit B [Vibrio sp. RC341] gi|262402079|ref|ZP_06078643.1| DNA gyrase subunit B [Vibrio sp. RC586] gi|260837534|gb|EEX64237.1| DNA gyrase subunit B [Vibrio sp. RC341] gi|262351725|gb|EEZ00857.1| DNA gyrase subunit B [Vibrio sp. RC586] Length = 805 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 81/246 (32%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + I + ++D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGYCKDIVVTIHED--NSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L++ +Q G + + V Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKVLLTIYRGGKIHSQTYHHGVPQAPLAVVG 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T VR P+ F + + +++ +R ++ VS S + K Sbjct: 159 DTERTGTTVRF----WPSAQTFT-NIEFHYDILAKRLRELSFLNSGVSIKLSDEREEDKK 213 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 +F G ++ + + + +N G Y F N Sbjct: 214 DHFMYEGG-IQAFVTHLNRNKTPIHEKVFHFNQEREDGISVEVAMQWNDGFQENIYCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|313621661|gb|EFR92452.1| DNA gyrase subunit B [Listeria innocua FSL S4-378] Length = 286 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A + +E I + + DNG G+ Sbjct: 52 EIVDNAIDEALAGFCTEIEITIEAD--NSITVRDNGRGIP 89 >gi|192289582|ref|YP_001990187.1| PAS/PAC sensor signal transduction histidine kinase [Rhodopseudomonas palustris TIE-1] gi|192283331|gb|ACE99711.1| PAS/PAC sensor signal transduction histidine kinase [Rhodopseudomonas palustris TIE-1] Length = 450 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 30 LIENSLDA----ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N+LDA + R+E GG ++DNG G+ I + T+K Sbjct: 353 LVDNALDAVRGQSAPRIEIAARRGGDQIVITVSDNGAGLPDGLIDKIFEPFFTTK 407 >gi|149377750|ref|ZP_01895484.1| DNA topoisomerase IV subunit B [Marinobacter algicola DG893] gi|149357976|gb|EDM46464.1| DNA topoisomerase IV subunit B [Marinobacter algicola DG893] Length = 631 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 72/214 (33%), Gaps = 37/214 (17%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EIP 69 RP+ +E+I+NS+D A + R++ ++ G + D+G GM + + Sbjct: 32 RPNHLAQEVIDNSVDEALAGHARRIDVILHSDG--SLSVEDDGRGMPVDMHKEHGVPGVE 89 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKI 128 + + R H K S + F G L +G VS + +S + ++ Sbjct: 90 LILTRLHAGGKFSQ-----GNYNFSG-GLHGVG-VSVVNALSTHLE-----VSIKRDGQL 137 Query: 129 SSVRPVAMNPGTIVEVRDLFF--TIPARLNFLK------SEQVETNLITDVIRRMAIAYP 180 + + T + V D RL F S + + + +R A+ P Sbjct: 138 HQMTFANGHKETDLTVVDSVGKRNTGTRLKFTPDPSYFDSPKFSVSRLRHNLRAKAVLCP 197 Query: 181 --KVSFTFSTIKSNRYKMNFQSTNGNFPERISQV 212 V+F ++ + Sbjct: 198 GLNVTFLQEHTGDKDEWCYEGGLRDYLRTELADI 231 >gi|148691972|gb|EDL23919.1| microrchidia 4, isoform CRA_b [Mus musculus] Length = 977 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + K TD+G GMT ++ + T Sbjct: 142 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKKKPCLTFTDDGCGMTPHKLHRMLSFGFT 201 Query: 78 SK 79 K Sbjct: 202 DK 203 >gi|126541048|emb|CAM46135.1| microrchidia 4 [Mus musculus] Length = 928 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + K TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKKKPCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|39934055|ref|NP_946331.1| sensor histidine kinase [Rhodopseudomonas palustris CGA009] gi|39647903|emb|CAE26423.1| sensor histidine kinase with a PAS domain [Rhodopseudomonas palustris CGA009] Length = 450 Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 30 LIENSLDA----ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N+LDA + R+E GG ++DNG G+ I + T+K Sbjct: 353 LVDNALDAVRGQSAPRIEIAARRGGDQIVITVSDNGAGLPDGLIDKIFEPFFTTK 407 >gi|330827718|ref|YP_004390670.1| sensor histidine kinase [Aeromonas veronii B565] gi|328802854|gb|AEB48053.1| Sensor histidine kinase [Aeromonas veronii B565] Length = 655 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 7/57 (12%) Query: 30 LIENSL----DA--ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 LI NS+ D+ + ++ + G+ +DNG G+ E +P TSK Sbjct: 553 LILNSINHGFDSWDKPKKITIKVEQQGEELFIDYSDNGRGIPPEILPRIFDPFVTSK 609 >gi|297162917|gb|ADI12629.1| DNA topoisomerase IV subunit B [Streptomyces bingchenggensis BCW-1] Length = 703 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 6/43 (13%) Query: 29 ELIENSLD---AES-SRVETVIAGGGKSFFQITDNGFGMTSEE 67 E+I+NS+D A + +E V+ G ++TDNG G+ + Sbjct: 55 EIIDNSVDEALAGACDHIEVVLHDDG--SVEVTDNGRGIPVDN 95 >gi|227541366|ref|ZP_03971415.1| DNA gyrase subunit B [Corynebacterium glucuronolyticum ATCC 51866] gi|227182917|gb|EEI63889.1| DNA gyrase subunit B [Corynebacterium glucuronolyticum ATCC 51866] Length = 691 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 66/179 (36%), Gaps = 25/179 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE---------EIPMAVQRH 75 E+++NS+D A + +V+ V+ G ++TDNG G+ E E+ M Q H Sbjct: 51 EVVDNSIDEALAGFADKVDVVLHEDG--SVEVTDNGRGIPVEMHQTGRPTVEVVM-TQLH 107 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K ++D + + G G + + A+S + + + + Sbjct: 108 AGGKFNNDSYKV-SGGLHGVGISVVNALSTRVEADIKRDGYHWYQRFNNQVPDDLEKGGK 166 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNR 193 A GT + ++ + I+D +++MA V + + + Sbjct: 167 ARGTGTRIRFW-------PDAEIFETVEFNYKTISDRLQQMAFLNKGVYIKLTDKRKHI 218 >gi|227487658|ref|ZP_03917974.1| DNA gyrase subunit B [Corynebacterium glucuronolyticum ATCC 51867] gi|227092352|gb|EEI27664.1| DNA gyrase subunit B [Corynebacterium glucuronolyticum ATCC 51867] Length = 691 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 66/179 (36%), Gaps = 25/179 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE---------EIPMAVQRH 75 E+++NS+D A + +V+ V+ G ++TDNG G+ E E+ M Q H Sbjct: 51 EVVDNSIDEALAGFADKVDVVLHEDG--SVEVTDNGRGIPVEMHQTGRPTVEVVM-TQLH 107 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K ++D + + G G + + A+S + + + + Sbjct: 108 AGGKFNNDSYKV-SGGLHGVGISVVNALSTRVEADIKRDGYHWYQRFNNQVPDDLEKGGK 166 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNR 193 A GT + ++ + I+D +++MA V + + + Sbjct: 167 ARGTGTRIRFW-------PDAEIFETVEFNYKTISDRLQQMAFLNKGVYIKLTDKRKHI 218 >gi|194016365|ref|ZP_03054979.1| DNA gyrase, B subunit [Bacillus pumilus ATCC 7061] gi|194011838|gb|EDW21406.1| DNA gyrase, B subunit [Bacillus pumilus ATCC 7061] Length = 640 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I + + DNG G+ Sbjct: 46 EIVDNSIDEALAGYCTDITVQIEKD--NSITVKDNGRGIP 83 >gi|157690804|ref|YP_001485266.1| DNA gyrase subunit B [Bacillus pumilus SAFR-032] gi|157679562|gb|ABV60706.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Bacillus pumilus SAFR-032] Length = 642 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I + + DNG G+ Sbjct: 48 EIVDNSIDEALAGYCTDITVQIEKD--NSITVKDNGRGIP 85 >gi|119512311|ref|ZP_01631397.1| DNA topoisomerase IV subunit B [Nodularia spumigena CCY9414] gi|119463024|gb|EAW43975.1| DNA topoisomerase IV subunit B [Nodularia spumigena CCY9414] Length = 645 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 39 VYEVVDNSIDEALAGHCTHIEVDINADG--SVTVTDDGRGIPTD 80 >gi|118470567|ref|YP_884428.1| DNA gyrase subunit B [Mycobacterium smegmatis str. MC2 155] gi|152032506|sp|A0QNE0|GYRB_MYCS2 RecName: Full=DNA gyrase subunit B gi|152032507|sp|P0C559|GYRB_MYCSM RecName: Full=DNA gyrase subunit B gi|118171854|gb|ABK72750.1| DNA gyrase, B subunit [Mycobacterium smegmatis str. MC2 155] Length = 675 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 13/53 (24%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E+++N++D A ++RV+ I G ++ D+G G+ V+ H T Sbjct: 48 EVVDNAVDEAMAGFATRVDVKIHADG--SVEVRDDGRGIP-------VEMHAT 91 >gi|1226021|emb|CAA58884.1| DNA gyrase [Mycobacterium smegmatis] Length = 675 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 13/53 (24%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E+++N++D A ++RV+ I G ++ D+G G+ V+ H T Sbjct: 48 EVVDNAVDEAMAGFATRVDVKIHADG--SVEVRDDGRGIP-------VEMHAT 91 >gi|75908731|ref|YP_323027.1| DNA gyrase subunit B [Anabaena variabilis ATCC 29413] gi|75702456|gb|ABA22132.1| DNA gyrase subunit B [Anabaena variabilis ATCC 29413] Length = 645 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 39 VYEVVDNSIDEALAGYCTHIEVDINADG--SVTVTDDGRGIPTD 80 >gi|31071475|dbj|BAC76786.1| DNA gyrase B subunit [Nostoc entophytum] Length = 396 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 10 VYEVVDNSIDEALAGYCTHIEVDINADG--SVTVTDDGRGIPTD 51 >gi|23978220|dbj|BAC21108.1| DNA gyrase B subunit [Nostoc linckia] Length = 396 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 10 VYEVVDNSIDEALAGYCTHIEVDINADG--SVTVTDDGRGIPTD 51 >gi|23978211|dbj|BAC21105.1| DNA gyrase B subunit [Anabaena variabilis] Length = 396 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 10 VYEVVDNSIDEALAGYCTHIEVDINADG--SVTVTDDGRGIPTD 51 >gi|7437446|pir||S70991 DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) chain B - Mycobacterium smegmatis gi|1321898|emb|CAA63253.1| gyrB [Mycobacterium smegmatis] Length = 706 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 13/53 (24%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E+++N++D A ++RV+ I G ++ D+G G+ V+ H T Sbjct: 79 EVVDNAVDEAMAGFATRVDVKIHADG--SVEVRDDGRGIP-------VEMHAT 122 >gi|1213062|emb|CAA63917.1| DNA gyrase subunit B [Mycobacterium smegmatis str. MC2 155] Length = 675 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 13/53 (24%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E+++N++D A ++RV+ I G ++ D+G G+ V+ H T Sbjct: 48 EVVDNAVDEAMAGFATRVDVKIHADG--SVEVRDDGRGIP-------VEMHAT 91 >gi|291529939|emb|CBK95524.1| PAS domain S-box [Eubacterium siraeum 70/3] Length = 581 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 11/57 (19%) Query: 29 ELIEN----SL----DAESSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHC 76 EL+EN ++ D RVE + G + DNG G+ E + +R Sbjct: 472 ELVENIVSNAIKYNKDGG--RVEITLHNVGETGCIYVRDNGIGIPKESLNRVFERFY 526 >gi|172061830|ref|YP_001809482.1| integral membrane sensor signal transduction histidine kinase [Burkholderia ambifaria MC40-6] gi|171994347|gb|ACB65266.1| integral membrane sensor signal transduction histidine kinase [Burkholderia ambifaria MC40-6] Length = 677 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 20/91 (21%) Query: 22 RPSIAIKELIENSLDA--E--SSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + +E IA + ++ DNG G+ + +P + Sbjct: 557 RLEQVLINLLGNALDAVAGVTAPAIEVTIAVSVATLAVEVRDNGPGIAPDLLPRLFEPFF 616 Query: 77 TSKISDDFSNIHTFGFRGEAL-----PSIGA 102 T+K G RG L SI + Sbjct: 617 TTK---------EMG-RGLGLGLAISSSIAS 637 >gi|89067410|ref|ZP_01154923.1| two-component hybrid sensor and regulator [Oceanicola granulosus HTCC2516] gi|89046979|gb|EAR53033.1| two-component hybrid sensor and regulator [Oceanicola granulosus HTCC2516] Length = 516 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 29/99 (29%) Query: 5 KLSEKIINQIAAGEIIE-----RPSIAIK------E-----LIENSLDAES-----SRVE 43 +L AGE+I+ P + ++ E L+ N+ DA + SR+ Sbjct: 234 QLPAS-----RAGEVIDYVVDIDPQVCVECDPGQLENALFNLVLNARDAFARSGTGSRIT 288 Query: 44 TVIAGG---GKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 A G G + D+G GM+ + + A T+K Sbjct: 289 ISTAPGPREGMVEIVVRDDGPGMSDDVLERAADPFFTTK 327 >gi|186686392|ref|YP_001869588.1| DNA gyrase subunit B [Nostoc punctiforme PCC 73102] gi|186468844|gb|ACC84645.1| DNA gyrase, B subunit [Nostoc punctiforme PCC 73102] Length = 645 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ + Sbjct: 39 VYEVVDNSIDEALAGHCTHIEVDINADG--SVTVTDDGRGIPVD 80 >gi|323143411|ref|ZP_08078096.1| DNA gyrase, B subunit [Succinatimonas hippei YIT 12066] gi|322416816|gb|EFY07465.1| DNA gyrase, B subunit [Succinatimonas hippei YIT 12066] Length = 807 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 85/247 (34%), Gaps = 23/247 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +E I G ++ DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGFCTDIEVTICADG--SVKVKDNGRGIPVDEHPEEHRSAAEVVMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K + + + G G + + A+S +++ Q + Q ++G + Sbjct: 102 AGGKFDSNSYKV-SGGLHGVGVSVVNALSDKLVLTIWRQGHVWQQTYLNGGNPEAPLKQI 160 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + + + + + N++ +R ++ + + + K Sbjct: 161 GDSDATGTEVRFW----PSPSIFSNTTFDYNVLAKRLRELSFLNSGIKIILT-DEREAGK 215 Query: 196 MNFQSTNGNFPERISQVI-GEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 + NG E + + G++ +NN + K E + + + F Sbjct: 216 SHTFHHNGGIEEFVRYLNRGKNPLNNKIFHCTKMCEDHIMVEISMQW-TDAYNESVFCFT 274 Query: 255 NGRTVQD 261 N +D Sbjct: 275 NNVPQKD 281 >gi|146305046|ref|YP_001185511.1| DNA gyrase subunit B [Pseudomonas mendocina ymp] gi|145573247|gb|ABP82779.1| DNA gyrase subunit B [Pseudomonas mendocina ymp] Length = 806 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 77/247 (31%), Gaps = 25/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A S + I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGYCSEIVITIHPD--ESISVRDNGRGIPVDIHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+S L L R QI G + + V Sbjct: 102 AGGKFDDNTYKV-SGGLHGVGVSVVNALSEELRLTIRRAG-KVWEQIYHHGVPQAPLATV 159 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 GT E+ A + +++ +R ++ V +S + Sbjct: 160 GDTDGTGTEIH-----FKASAETFSNIHFSWDILAKRLRELSFLNSGVGILLRDERSGKE 214 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 ++ G + + + N V E G +N F Sbjct: 215 ELFKY--EGGLKAFVEYLNTNKNVVNQVFHFNIQREEDGVGVEVALQWNDSFNENILCFT 272 Query: 255 NGRTVQD 261 N +D Sbjct: 273 NNIPQRD 279 >gi|106734189|gb|ABF82571.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734201|gb|ABF82577.1| DNA topoisomerase IV subunit beta [uncultured bacterium] Length = 47 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG G+ + Sbjct: 5 EIVDNSIDEALAGYCDTIKVTIESG--NSILVEDNGRGIPVD 44 >gi|291165885|gb|EFE27932.1| DNA gyrase, B subunit [Filifactor alocis ATCC 35896] Length = 638 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A + I G + ++ D+G G+ +E Sbjct: 45 VYEVVDNAIDEALAGFCKTIYVAIEEG--NAIRVIDDGRGIPTE 86 >gi|237807477|ref|YP_002891917.1| hypothetical protein Tola_0702 [Tolumonas auensis DSM 9187] gi|237499738|gb|ACQ92331.1| conserved hypothetical protein [Tolumonas auensis DSM 9187] Length = 588 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 26 AIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPM 70 A+KELI+N DA++ + + + DNG GMT E+ Sbjct: 26 ALKELIDNGWDADAEHINISLPEPLTSDPVIVCDNGSGMTEHELLK 71 >gi|195953991|ref|YP_002122281.1| DNA gyrase, B subunit [Hydrogenobaculum sp. Y04AAS1] gi|195933603|gb|ACG58303.1| DNA gyrase, B subunit [Hydrogenobaculum sp. Y04AAS1] Length = 786 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ + I + DNG G+ Sbjct: 40 EIVDNSVDEAMAGYATHIRVHIHQD--DSITVEDNGRGIP 77 >gi|167760490|ref|ZP_02432617.1| hypothetical protein CLOSCI_02864 [Clostridium scindens ATCC 35704] gi|167661856|gb|EDS05986.1| hypothetical protein CLOSCI_02864 [Clostridium scindens ATCC 35704] Length = 409 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 30 LIENSLD---AESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFS 85 L++N+LD A + I+DNG G+ E+I +R SK S D Sbjct: 311 LVKNALDHTMAG-GIIRISWENTPNMLRLCISDNGSGIAPEDIHHIFKRFYRSKHSLDTQ 369 Query: 86 NIH 88 I Sbjct: 370 GIG 372 >gi|145637577|ref|ZP_01793234.1| DNA topoisomerase IV subunit B [Haemophilus influenzae PittHH] gi|145269263|gb|EDK09209.1| DNA topoisomerase IV subunit B [Haemophilus influenzae PittHH] Length = 632 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A +S++E ++ ++TDNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFASKIEVILHPD--QSIEVTDNGRGMPVD 77 >gi|145632919|ref|ZP_01788652.1| DNA topoisomerase IV subunit B [Haemophilus influenzae 3655] gi|144986575|gb|EDJ93141.1| DNA topoisomerase IV subunit B [Haemophilus influenzae 3655] Length = 632 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A +S++E ++ ++TDNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFASKIEVILHPD--QSIEVTDNGRGMPVD 77 >gi|68249955|ref|YP_249067.1| DNA topoisomerase IV subunit B [Haemophilus influenzae 86-028NP] gi|148826055|ref|YP_001290808.1| DNA topoisomerase IV subunit B [Haemophilus influenzae PittEE] gi|68058154|gb|AAX88407.1| topoisomerase IV subunit B [Haemophilus influenzae 86-028NP] gi|148716215|gb|ABQ98425.1| DNA topoisomerase IV subunit B [Haemophilus influenzae PittEE] Length = 632 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A +S++E ++ ++TDNG GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGFASKIEVILHPD--QSIEVTDNGRGMPVD 77 >gi|325972866|ref|YP_004249057.1| DNA gyrase subunit beta [Spirochaeta sp. Buddy] gi|324028104|gb|ADY14863.1| DNA gyrase, B subunit [Spirochaeta sp. Buddy] Length = 677 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 6/53 (11%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGG--GKSFFQITDNGFGMTSE 66 IE + E+++NS+D A S ++ + G+ + DNG G+ E Sbjct: 56 IEGLHHLVYEVVDNSIDEAMAGYCSDIQVFLDLDSEGREICTVEDNGRGIPVE 108 >gi|218132753|ref|ZP_03461557.1| hypothetical protein BACPEC_00614 [Bacteroides pectinophilus ATCC 43243] gi|217992479|gb|EEC58482.1| hypothetical protein BACPEC_00614 [Bacteroides pectinophilus ATCC 43243] Length = 383 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 42 VETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRH 75 + + G + +I DNG G++ E++ +R Sbjct: 284 IRIELFNDGDYALIRIEDNGKGISPEDLKHVFERF 318 >gi|84687059|ref|ZP_01014942.1| C4-dicarboxylate transport sensor protein DctB, putative [Maritimibacter alkaliphilus HTCC2654] gi|84665033|gb|EAQ11514.1| C4-dicarboxylate transport sensor protein DctB, putative [Rhodobacterales bacterium HTCC2654] Length = 596 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 10/68 (14%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N++DA ++ V+ ++ GG + + DNG G+ E++ + Sbjct: 479 RLEQVLINLLRNAIDA--TKSVDDPQVDILLTGGEQVVISVRDNGPGV--EDLDQLFEPF 534 Query: 76 CTSKISDD 83 T+K D Sbjct: 535 YTTKAPGD 542 >gi|264680176|ref|YP_003280085.1| hypothetical protein CtCNB1_4043 [Comamonas testosteroni CNB-2] gi|262210691|gb|ACY34789.1| conserved hypothetical protein [Comamonas testosteroni CNB-2] Length = 655 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Query: 13 QIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 +IA + P +A+ EL+ N+ DA +S V+ I + + D+G GM + + Sbjct: 28 RIA-----QDPEVALTELVANAWDAGASLVDLTIPLTNELALTVEDDGHGMNASQFK 79 >gi|121534128|ref|ZP_01665953.1| histidine kinase [Thermosinus carboxydivorans Nor1] gi|121307231|gb|EAX48148.1| histidine kinase [Thermosinus carboxydivorans Nor1] Length = 187 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 3/52 (5%) Query: 30 LIENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 L++NS++A + VE I +++DNG GM A TS Sbjct: 11 LVQNSIEAGAGVVEVTINEDKQQDLLVLRVSDNGRGMDEMTCRQATDPFVTS 62 >gi|15835080|ref|NP_296839.1| DNA gyrase subunit B [Chlamydia muridarum Nigg] gi|270285247|ref|ZP_06194641.1| DNA gyrase subunit B [Chlamydia muridarum Nigg] gi|270289266|ref|ZP_06195568.1| DNA gyrase subunit B [Chlamydia muridarum Weiss] gi|301336643|ref|ZP_07224845.1| DNA gyrase subunit B [Chlamydia muridarum MopnTet14] gi|13627141|sp|Q9PKK3|GYRB_CHLMU RecName: Full=DNA gyrase subunit B gi|7190505|gb|AAF39313.1| DNA gyrase, subunit B [Chlamydia muridarum Nigg] Length = 804 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 + + E+++NS+D A + V I GG ++DNG G+ Sbjct: 35 VTGLHHLVYEVVDNSIDEAMAGFCTEVVVRILEDGG---ISVSDNGRGIP 81 >gi|327438158|dbj|BAK14523.1| type IIA topoisomerase, B subunit [Solibacillus silvestris StLB046] Length = 641 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A S + I ++ ++ DNG G+ + Sbjct: 48 EIVDNSIDEALAGYCSGITVTIEQD--NWIRVEDNGRGIPVD 87 >gi|303235765|ref|ZP_07322372.1| DNA gyrase, B subunit [Prevotella disiens FB035-09AN] gi|302484212|gb|EFL47200.1| DNA gyrase, B subunit [Prevotella disiens FB035-09AN] Length = 683 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 E ++NS+D A S +E I + + D+G G+ +E Sbjct: 74 ETVDNSIDEAMAGYCSHIEVTINED--NSITVEDDGRGIPVDEHEKL 118 >gi|229083806|ref|ZP_04216118.1| Sensor histidine kinase [Bacillus cereus Rock3-44] gi|228699508|gb|EEL52181.1| Sensor histidine kinase [Bacillus cereus Rock3-44] Length = 535 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 14/84 (16%) Query: 19 IIERPSIAIKELIENSLDA--ES--SRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 II + LI+N+LDA RV+ I K + D G G+ EEI + Sbjct: 423 IIHELITIVGNLIDNALDAVMNCEYKRVDISIQYQDKLTITVKDTGVGIQKEEIDKVFVK 482 Query: 75 HCTSK----------ISDDFSNIH 88 ++K ISD I+ Sbjct: 483 GYSTKGENRGYGLYLISDSLKRIN 506 >gi|284992968|ref|YP_003411522.1| histidine kinase [Geodermatophilus obscurus DSM 43160] gi|284066213|gb|ADB77151.1| histidine kinase [Geodermatophilus obscurus DSM 43160] Length = 414 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 5/58 (8%) Query: 23 PSIAIKELIENSLDAES---SRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 + A+ L+ N++ A S +R+ G +TDNG G+ E+ +R Sbjct: 273 LATAVTNLLANAV-AYSPEHTRIAVSARARAGFVEITVTDNGIGIPREDRSRVFERFY 329 >gi|254520691|ref|ZP_05132747.1| DNA gyrase subunit B [Clostridium sp. 7_2_43FAA] gi|226914440|gb|EEH99641.1| DNA gyrase subunit B [Clostridium sp. 7_2_43FAA] Length = 637 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + + I + + DNG GM Sbjct: 43 VYEIVDNSIDEALAGFCTEISVAINED--NSITVIDNGRGMP 82 >gi|254524349|ref|ZP_05136404.1| DNA topoisomerase IV, B subunit [Stenotrophomonas sp. SKA14] gi|219721940|gb|EED40465.1| DNA topoisomerase IV, B subunit [Stenotrophomonas sp. SKA14] Length = 629 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + +E + G +++D+G GM EE + Sbjct: 31 RPNHLAQEVIDNSVDEALAGHARSIEITLYKDG--SVEVSDDGRGMPVDIHPEEKIPGVE 88 Query: 70 MAVQR-HCTSKISD 82 + + R H K S+ Sbjct: 89 LILTRLHAGGKFSN 102 >gi|190573692|ref|YP_001971537.1| DNA topoisomerase IV subunit B [Stenotrophomonas maltophilia K279a] gi|190011614|emb|CAQ45233.1| putative topoisomerase IV subunit B [Stenotrophomonas maltophilia K279a] Length = 629 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + +E + G +++D+G GM EE + Sbjct: 31 RPNHLAQEVIDNSVDEALAGHARSIEITLYKDG--SVEVSDDGRGMPVDIHPEEKIPGVE 88 Query: 70 MAVQR-HCTSKISD 82 + + R H K S+ Sbjct: 89 LILTRLHAGGKFSN 102 >gi|9622089|gb|AAF89615.1|AF167433_1 gyrase B [Thermus thermophilus] Length = 634 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 6/43 (13%) Query: 28 KELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 KE+++N++D A ++ + + G + DNG G+ + Sbjct: 38 KEILDNAVDEALAGYATEILVRLNEDG--SLTVEDNGRGIPVD 78 >gi|46199524|ref|YP_005191.1| DNA gyrase subunit B [Thermus thermophilus HB27] gi|46197150|gb|AAS81564.1| DNA gyrase subunit B [Thermus thermophilus HB27] Length = 640 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 6/43 (13%) Query: 28 KELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 KE+++N++D A ++ + + G + DNG G+ + Sbjct: 44 KEILDNAVDEALAGYATEILVRLNEDG--SLTVEDNGRGIPVD 84 >gi|55981555|ref|YP_144852.1| DNA gyrase subunit B [Thermus thermophilus HB8] gi|55772968|dbj|BAD71409.1| DNA gyrase, subunit B [Thermus thermophilus HB8] Length = 634 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 6/43 (13%) Query: 28 KELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 KE+++N++D A ++ + + G + DNG G+ + Sbjct: 38 KEILDNAVDEALAGYATEILVRLNEDG--SLTVEDNGRGIPVD 78 >gi|300934866|ref|NP_001180238.1| MORC family CW-type zinc finger protein 4 isoform A [Mus musculus] gi|73921009|sp|Q8BMD7|MORC4_MOUSE RecName: Full=MORC family CW-type zinc finger protein 4; AltName: Full=Zinc finger CW-type coiled-coil domain protein 2 Length = 928 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + K TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKKKPCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|21465844|pdb|1KIJ|A Chain A, Crystal Structure Of The 43k Atpase Domain Of Thermus Thermophilus Gyrase B In Complex With Novobiocin gi|21465845|pdb|1KIJ|B Chain B, Crystal Structure Of The 43k Atpase Domain Of Thermus Thermophilus Gyrase B In Complex With Novobiocin Length = 390 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 6/43 (13%) Query: 28 KELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 KE+++N++D A ++ + + G + DNG G+ + Sbjct: 38 KEILDNAVDEALAGYATEILVRLNEDG--SLTVEDNGRGIPVD 78 >gi|329942857|ref|ZP_08291636.1| DNA gyrase, B subunit [Chlamydophila psittaci Cal10] gi|332287450|ref|YP_004422351.1| DNA gyrase subunit B [Chlamydophila psittaci 6BC] gi|313848029|emb|CBY17027.1| DNA gyrase subunit B [Chlamydophila psittaci RD1] gi|325506975|gb|ADZ18613.1| DNA gyrase subunit B [Chlamydophila psittaci 6BC] gi|328815117|gb|EGF85106.1| DNA gyrase, B subunit [Chlamydophila psittaci Cal10] gi|328914698|gb|AEB55531.1| DNA gyrase, B subunit [Chlamydophila psittaci 6BC] Length = 806 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 I + E+++NS+D A S + I GG I+DNG G+ Sbjct: 35 ITGLHHLVYEVVDNSIDEAMAGYCSEIHVRILEDGG---ITISDNGRGIP 81 >gi|52080825|ref|YP_079616.1| two-component sensor histidine kinase ResE [Bacillus licheniformis ATCC 14580] gi|52786196|ref|YP_092025.1| ResE1 [Bacillus licheniformis ATCC 14580] gi|52004036|gb|AAU23978.1| two-component sensor histidine kinase ResE [Bacillus licheniformis ATCC 14580] gi|52348698|gb|AAU41332.1| ResE1 [Bacillus licheniformis ATCC 14580] Length = 593 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 5/51 (9%) Query: 30 LIENSL---DAESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 LI+N++ +A + V+ A G + D+G G+ E++P +R Sbjct: 487 LIDNAIRHTNAGGTVHVDVQSAESGLK-IAVKDSGSGIPEEDLPFIFERFY 536 >gi|89898309|ref|YP_515419.1| DNA gyrase subunit B [Chlamydophila felis Fe/C-56] gi|89331681|dbj|BAE81274.1| DNA gyrase subunit B [Chlamydophila felis Fe/C-56] Length = 806 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 I + E+++NS+D A S + I GG I+DNG G+ Sbjct: 35 ITGLHHLVYEVVDNSIDEAMAGYCSEIHVRILEDGG---ITISDNGRGIP 81 >gi|62185121|ref|YP_219906.1| DNA gyrase subunit B [Chlamydophila abortus S26/3] gi|62148188|emb|CAH63945.1| DNA gyrase subunit B [Chlamydophila abortus S26/3] Length = 806 Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 I + E+++NS+D A S + I GG I+DNG G+ Sbjct: 35 ITGLHHLVYEVVDNSIDEAMAGYCSEIHVRILEDGG---ITISDNGRGIP 81 >gi|330806661|ref|YP_004351123.1| DNA gyrase subunit B [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327374769|gb|AEA66119.1| DNA gyrase subunit B [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 792 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 77/246 (31%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 31 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 88 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S +++ Q I G + + V Sbjct: 89 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEQLVLTVRRSGKIWEQTYIHGVPQAPMAIVG 147 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ A K+ +++ IR ++ V +S + + Sbjct: 148 DSESTGTQIH-----FKASSETFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 202 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V E + + N F N Sbjct: 203 LFKY--EGGLRAFVEYLNTNKTPVNQVFHFNVQREDGIGVEIALQW-NDSFNENLLCFTN 259 Query: 256 GRTVQD 261 +D Sbjct: 260 NIPQRD 265 >gi|297561738|ref|YP_003680712.1| integral membrane sensor signal transduction histidine kinase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846186|gb|ADH68206.1| integral membrane sensor signal transduction histidine kinase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 475 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 10/69 (14%) Query: 10 IINQIAAGEIIERPSIAIKELIENSLDAES-SRVETVI-AGGGKSFFQITDNGFGMTSEE 67 + N++ R + LI N+ D + SRV+ ++ G + ++ D+G G+ E Sbjct: 347 VANRL-------RLVRVLTNLIANA-DRHAVSRVDVIVGREDGFAVVEVHDDGSGIPPGE 398 Query: 68 IPMAVQRHC 76 +R Sbjct: 399 RERIFERFA 407 >gi|126541049|emb|CAM46136.1| microrchidia 4 [Mus musculus] Length = 883 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + K TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKKKPCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|14591346|ref|NP_143424.1| DNA topoisomerase VI subunit B [Pyrococcus horikoshii OT3] gi|13124601|sp|O74020|TOP6B_PYRHO RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|3257993|dbj|BAA30676.1| 564aa long hypothetical typeII DNA topoisomerase subunit B [Pyrococcus horikoshii OT3] Length = 564 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 7/60 (11%) Query: 20 IERPSIAIKELIENSLDA--ESS---RVETVIAGGGKS--FFQITDNGFGMTSEEIPMAV 72 I + I E + NSLDA E+ + I GK + DNG G+ E IP Sbjct: 33 IRSLTTIIHEAVTNSLDACEEAGILPTIRVEIEELGKEHYKVIVEDNGPGIPEEYIPHVF 92 >gi|329893839|ref|ZP_08269910.1| Topoisomerase IV subunit B [gamma proteobacterium IMCC3088] gi|328923438|gb|EGG30753.1| Topoisomerase IV subunit B [gamma proteobacterium IMCC3088] Length = 629 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 6/49 (12%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A +S ++ V+ G ++DNG GM + Sbjct: 30 RPNHLAQEVIDNSVDEALAGFASEIDVVVFKDG--SVSVSDNGRGMPVD 76 >gi|309811435|ref|ZP_07705222.1| DNA gyrase, B subunit [Dermacoccus sp. Ellin185] gi|308434742|gb|EFP58587.1| DNA gyrase, B subunit [Dermacoccus sp. Ellin185] Length = 713 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 8/41 (19%) Query: 29 ELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMT 64 E+++NS+D A ++RV+ I G +++DNG G+ Sbjct: 78 EIVDNSVDEALAGHATRVDVTILPDNG---IRVSDNGRGIP 115 >gi|94990120|ref|YP_598220.1| DNA gyrase subunit B [Streptococcus pyogenes MGAS10270] gi|94543628|gb|ABF33676.1| DNA gyrase subunit B [Streptococcus pyogenes MGAS10270] Length = 408 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIKVFIEAD--NSITVVDDGRGIPVD 90 >gi|85057535|ref|YP_456451.1| DNA gyrase subunit B [Aster yellows witches'-broom phytoplasma AYWB] gi|84789640|gb|ABC65372.1| DNA gyrase subunit B [Aster yellows witches'-broom phytoplasma AYWB] Length = 671 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ + I G ++DNG G+ + Sbjct: 40 EIVDNSIDEALAGHANNITLEILPG--EIISVSDNGRGIPVD 79 >gi|39938984|ref|NP_950750.1| DNA gyrase beta subunit [Onion yellows phytoplasma OY-M] gi|39722093|dbj|BAD04583.1| DNA gyrase beta subunit [Onion yellows phytoplasma OY-M] Length = 671 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++ I G ++DNG G+ + Sbjct: 40 EIVDNSIDEALAGHANKITLEILPG--EIISVSDNGRGIPVD 79 >gi|21228519|ref|NP_634441.1| DNA topoisomerase VI subunit B [Methanosarcina mazei Go1] gi|23822274|sp|Q8PUB8|TOP6B_METMA RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|152149435|pdb|2Q2E|B Chain B, Crystal Structure Of The Topoisomerase Vi Holoenzyme From Methanosarcina Mazei gi|20907005|gb|AAM32113.1| Type II DNA topoisomerase VI, subunit B [Methanosarcina mazei Go1] Length = 621 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 61/188 (32%), Gaps = 49/188 (26%) Query: 27 IKELIENSLDA--ESS---RVETVIAGGGKSFFQI--TDNGFGMTSEEIPMAV------Q 73 +KE ++N+LDA E+ + + G + + DNG G+ E+IP Sbjct: 42 VKEAVDNALDACEEAGILPDILVQVERTGPDYVTVIIEDNGPGIVREQIPKVFAKLLYGS 101 Query: 74 RHCTSKISDDFSNIHTFGFRGEALPSIGAV--SHLT------LMSRPPQNNTGAQIAISG 125 R K + G +G + AV + +T ++S+ + Sbjct: 102 RFHALK--------QSRGQQGIGIS--AAVLYAQMTAGRHTKILSKTSPTAPAHYYELMI 151 Query: 126 EK--------ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + VR GT +E+ + R I + ++ AI Sbjct: 152 NTSTNEPDILVDEVRDWFRPHGTQIELEMRAAYVKGRRQS----------IYEYLKATAI 201 Query: 178 AYPKVSFT 185 P T Sbjct: 202 VNPHARIT 209 >gi|315646886|ref|ZP_07900001.1| two-component sensor histidine kinase [Paenibacillus vortex V453] gi|315277816|gb|EFU41140.1| two-component sensor histidine kinase [Paenibacillus vortex V453] Length = 470 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 42 VETVIAGGGK-SFFQITDNGFGMTSEEIPMAVQRH 75 ++ + G + ++ DNG G+ EE+ R+ Sbjct: 389 IKVRVEKNGLHTLIRVEDNGKGIKQEELGRIFDRY 423 >gi|256421596|ref|YP_003122249.1| histidine kinase [Chitinophaga pinensis DSM 2588] gi|256036504|gb|ACU60048.1| histidine kinase [Chitinophaga pinensis DSM 2588] Length = 796 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Query: 7 SEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAG--GGKSFFQITDNGFGMT 64 I +I E+I IA+ ELI+NS DA++ ++ + + I D+G GMT Sbjct: 88 PRARIIKIIGQELISNDVIALVELIKNSYDADAEHIDIHLNEIFSDQGEIIIKDDGTGMT 147 Query: 65 SEEIPMAVQRHCT 77 E+I T Sbjct: 148 YEKIVNVWLEPAT 160 >gi|206900552|ref|YP_002250633.1| sensory transduction histidine kinase [Dictyoglomus thermophilum H-6-12] gi|206739655|gb|ACI18713.1| sensory transduction histidine kinase [Dictyoglomus thermophilum H-6-12] Length = 178 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 9/46 (19%) Query: 30 LIENSLDAESSRVETVIAGGGKSFF------QITDNGFGMTSEEIP 69 L++NS++A + + + K +I DNG G+ E + Sbjct: 11 LVQNSVEAGAKDIYIEMK---KDLINKKLMLRIKDNGKGIPPEMLE 53 >gi|322433218|ref|YP_004210439.1| histidine kinase [Acidobacterium sp. MP5ACTX9] gi|321165610|gb|ADW71312.1| histidine kinase [Acidobacterium sp. MP5ACTX9] Length = 242 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 10/84 (11%) Query: 2 KIRK---LSEKIINQIAAGEIIERPSIAIKELIENSLDAES--SRVETVI-AGGGKSFFQ 55 KI L ++ AGE I L+ N+LDA S V + GK+ Sbjct: 119 KIHLVRNLPPELSATAHAGE----LLQVISNLLVNALDALSPDGIVTLRLSKRFGKARLL 174 Query: 56 ITDNGFGMTSEEIPMAVQRHCTSK 79 + DNG G+T + + T+K Sbjct: 175 VADNGCGITDVLRDKVFEPYFTTK 198 >gi|283787083|ref|YP_003366948.1| two-component sensor kinase [Citrobacter rodentium ICC168] gi|282950537|emb|CBG90202.1| two-component sensor kinase [Citrobacter rodentium ICC168] Length = 543 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 30 LIENSLDAESSR----VETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LIEN+LDA + + + + G ++ D+G G+ + I + +SK Sbjct: 442 LIENALDALAQQPDGEISVSLYYRNGWLHCEVNDDGPGIEPDRIDAIFAKGVSSK 496 >gi|23978267|dbj|BAC21121.1| DNA gyrase B subunit [Nodularia sp. PCC 73104] Length = 396 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ + Sbjct: 10 VYEVVDNSIDEALAGHCTHIEVDINADG--SVTVTDDGRGIPID 51 >gi|114320108|ref|YP_741791.1| DNA topoisomerase IV subunit B [Alkalilimnicola ehrlichii MLHE-1] gi|114226502|gb|ABI56301.1| DNA topoisomerase IV subunit B [Alkalilimnicola ehrlichii MLHE-1] Length = 630 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 6/49 (12%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A ++RV+ + G ++ D+G GM + Sbjct: 31 RPNHLAQEVIDNSVDEVMAGHATRVDVTLFRDG--SLEVRDDGRGMPVD 77 >gi|283782558|ref|YP_003373312.1| DNA gyrase, B subunit [Gardnerella vaginalis 409-05] gi|297243224|ref|ZP_06927159.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Gardnerella vaginalis AMD] gi|298253027|ref|ZP_06976819.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Gardnerella vaginalis 5-1] gi|283442041|gb|ADB14507.1| DNA gyrase, B subunit [Gardnerella vaginalis 409-05] gi|296888758|gb|EFH27495.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Gardnerella vaginalis AMD] gi|297532422|gb|EFH71308.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Gardnerella vaginalis 5-1] Length = 691 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 6/47 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I + ++ D+G G+ +E+P Sbjct: 66 VYEIVDNSVDEALAGYASHIEVTILPD--NAIRVVDDGRGIPVDEVP 110 >gi|241079549|ref|XP_002408893.1| DNA gyrase subunit B, putative [Ixodes scapularis] gi|215492575|gb|EEC02216.1| DNA gyrase subunit B, putative [Ixodes scapularis] Length = 538 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 17/70 (24%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT----SEE---- 67 + P ++E+I+N+ D A + + + GG Q+ D+G G+ EE Sbjct: 6 DNPLHIVQEVIDNAADEALAGFARTLTVTLLEDGG---IQVEDDGRGIPVGLHPEENAPV 62 Query: 68 IPMAVQR-HC 76 + + R H Sbjct: 63 VELVFTRLHA 72 >gi|188589597|ref|YP_001920541.1| sensory histidine kinase [Clostridium botulinum E3 str. Alaska E43] gi|188499878|gb|ACD53014.1| sensor histidine kinase [Clostridium botulinum E3 str. Alaska E43] Length = 555 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 30 LIENSL---DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L+EN++ + S + G + +I+DNG G+ E++P +R Sbjct: 458 LVENAIKYSENGSKVKVVSYSKQGYYYLEISDNGIGIPKEDLPRVFERFY 507 >gi|148747238|ref|NP_083689.2| MORC family CW-type zinc finger protein 4 isoform B [Mus musculus] gi|124376452|gb|AAI32498.1| Microrchidia 4 [Mus musculus] Length = 883 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + K TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKKKPCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|106734203|gb|ABF82578.1| DNA topoisomerase IV subunit beta [uncultured bacterium] Length = 47 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG G+ + Sbjct: 5 EIVDNSIDEALAGYCDTIKVTIEPG--NSILVEDNGQGIPVD 44 >gi|1052804|emb|CAA58771.1| DNA gyrase B subunit [Streptococcus pneumoniae] Length = 648 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A +S ++ I + D+G G+ Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--DSITVVDDGRGIP 86 >gi|26328587|dbj|BAC28032.1| unnamed protein product [Mus musculus] Length = 883 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + K TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKKKPCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|303244669|ref|ZP_07331001.1| DNA topoisomerase VI, B subunit [Methanothermococcus okinawensis IH1] gi|302484977|gb|EFL47909.1| DNA topoisomerase VI, B subunit [Methanothermococcus okinawensis IH1] Length = 658 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Query: 25 IAIKELIENSLDA--ESS---RVETVIAGGGKS--FFQITDNGFGMTSEEIPMAV 72 I EL+ NSLDA E+ ++ I G + DNG G+ E +P Sbjct: 38 TIIHELVTNSLDACEEAEILPDIDIEIKKLGADHYKVVVEDNGPGIPPEFVPKVF 92 >gi|255281458|ref|ZP_05346013.1| putative sensor protein ResE [Bryantella formatexigens DSM 14469] gi|255267946|gb|EET61151.1| putative sensor protein ResE [Bryantella formatexigens DSM 14469] Length = 409 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 31 IENSLD--AESSRVETVIAGGGK-SFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 ++N+LD A ++ + I+DNG G+ E+I +R SK S D Sbjct: 312 VKNALDHTAADGKIRIAYERSSCMANIVISDNGPGILPEDIHHIFKRFYRSKNSGD 367 >gi|172035674|ref|YP_001802175.1| DNA gyrase subunit B [Cyanothece sp. ATCC 51142] gi|171697128|gb|ACB50109.1| DNA gyrase B subunit [Cyanothece sp. ATCC 51142] Length = 642 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 41 VYEVVDNSIDEALAGYCTHIEIDINPDG--SVTVTDDGRGIPTD 82 >gi|126660369|ref|ZP_01731481.1| DNA topoisomerase IV subunit B [Cyanothece sp. CCY0110] gi|126618342|gb|EAZ89099.1| DNA topoisomerase IV subunit B [Cyanothece sp. CCY0110] Length = 642 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 41 VYEVVDNSIDEALAGYCTHIEIDINPDG--SVTVTDDGRGIPTD 82 >gi|83952846|ref|ZP_00961576.1| DNA topoisomerase IV subunit B [Roseovarius nubinhibens ISM] gi|83835981|gb|EAP75280.1| DNA topoisomerase IV subunit B [Roseovarius nubinhibens ISM] Length = 652 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+I+NS+D A ++ +E + G + DNG G+ Sbjct: 49 VAEIIDNSMDEAVAGHATWIEVELHENG--HVSVRDNGRGIP 88 >gi|326319204|ref|YP_004236876.1| ATP-binding region ATPase domain-containing protein [Acidovorax avenae subsp. avenae ATCC 19860] gi|323376040|gb|ADX48309.1| ATP-binding region ATPase domain protein [Acidovorax avenae subsp. avenae ATCC 19860] Length = 483 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 15/127 (11%) Query: 22 RPSIAIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 + A+ ++++NS+ A +S V G +S I D+G GM+ E+ A++ Sbjct: 11 STAAALADIVDNSISAGASEVRIDFRWDGPESRVLILDDGRGMSDPELEGAMRLG----- 65 Query: 81 SDDFSNIHT-----FGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRP 133 D + + T G G L S+ LT+ S + + + Sbjct: 66 --DKNPLATREAHDLGRFGMGLKTASLSQCRRLTVASVKGSERSCLRWDLDELAADPQSD 123 Query: 134 VAMNPGT 140 + G Sbjct: 124 WLLFEGP 130 >gi|297609927|ref|NP_001063871.2| Os09g0551900 [Oryza sativa Japonica Group] gi|255679121|dbj|BAF25785.2| Os09g0551900 [Oryza sativa Japonica Group] Length = 97 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 4/78 (5%) Query: 76 CTSKISD---DFS-NIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSV 131 TSK + D + +FG GEAL S+ +S + + ++ I ++ Sbjct: 7 ATSKFHNVMVDGEPSSRSFGLNGEALASLSDISVVEVRTKARGRPNSYCKIIKVVYTLNL 66 Query: 132 RPVAMNPGTIVEVRDLFF 149 N T + FF Sbjct: 67 LKAQHNLDTYIHSVSEFF 84 >gi|124297883|gb|AAI32154.1| Microrchidia 4 [Mus musculus] Length = 883 Score = 47.0 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCT 77 RP AI EL++N++D + + V + K TD+G GMT ++ + T Sbjct: 48 TRPFSAIAELLDNAVDPDVSARTVFIDVEEVKKKPCLTFTDDGCGMTPHKLHRMLSFGFT 107 Query: 78 SK 79 K Sbjct: 108 DK 109 >gi|251778065|ref|ZP_04820985.1| sensor histidine kinase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082380|gb|EES48270.1| sensor histidine kinase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 564 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Query: 30 LIENSL---DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L+EN++ + S + G + +I+DNG G+ E++P +R Sbjct: 467 LVENAIKYSENGSKVKVVSYSKQGYYYLEISDNGIGIPKEDLPRVFERFY 516 >gi|238918166|ref|YP_002931680.1| DNA topoisomerase IV subunit B [Edwardsiella ictaluri 93-146] gi|238867734|gb|ACR67445.1| DNA topoisomerase IV, B subunit, putative [Edwardsiella ictaluri 93-146] Length = 631 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 77/213 (36%), Gaps = 33/213 (15%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A ++R+E ++ ++ DNG GM EE I Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHATRIEVILHPD--QSLEVIDNGRGMPVDIHPEEGVPAI 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R Q+A Sbjct: 89 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSRRVEVSVRRDGQI--YQMAFENG 145 Query: 127 KISSVRPV-----AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 + V N GT V F S + + +T +++ A+ P Sbjct: 146 EKVEDLHVSGTVGRRNTGTSVHFW-------PDAQFFDSARFSVSRLTHLLKAKAVLCPG 198 Query: 182 VS--FTFSTIKSNRYKMNFQSTNGNFPERISQV 212 V F S + E ++ + Sbjct: 199 VEILFRDLVNGSEQRWCYQDGLTDYLMESVNGL 231 >gi|269137554|ref|YP_003294254.1| DNA topoisomerase IV subunit B [Edwardsiella tarda EIB202] gi|238551759|gb|ACR44351.1| topoisomerase IV [Edwardsiella tarda] gi|267983214|gb|ACY83043.1| DNA topoisomerase IV subunit B [Edwardsiella tarda EIB202] gi|304557627|gb|ADM40291.1| Topoisomerase IV subunit B [Edwardsiella tarda FL6-60] Length = 631 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 77/213 (36%), Gaps = 33/213 (15%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A ++R+E ++ ++ DNG GM EE I Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHATRIEVILHPD--QSLEVIDNGRGMPVDIHPEEGVPAI 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R Q+A Sbjct: 89 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSRRVEVSVRRDGQI--YQMAFENG 145 Query: 127 KISSVRPV-----AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK 181 + V N GT V F S + + +T +++ A+ P Sbjct: 146 EKVEDLHVSGTVGRRNTGTSVHFW-------PDAQFFDSARFSVSRLTHLLKAKAVLCPG 198 Query: 182 VS--FTFSTIKSNRYKMNFQSTNGNFPERISQV 212 V F S + E ++ + Sbjct: 199 VEILFRDLVNGSEQRWCYQDGLTDYLMESVNGL 231 >gi|77918268|ref|YP_356083.1| two-component sensor histidine kinase PhoR [Pelobacter carbinolicus DSM 2380] gi|77544351|gb|ABA87913.1| PAS/PAC sensor signal transduction histidine kinase [Pelobacter carbinolicus DSM 2380] Length = 591 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Query: 23 PSIAIKELIENSL---DAESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 A+ L++N++ DA + +E ++ ++ D G G+ +E +P +R Sbjct: 485 LEQAVVNLVDNAIKYSDAGGTVWIEAR-RDARQTVIEVRDQGCGIDNEHLPRLFERFY 541 >gi|298252101|ref|ZP_06975904.1| integral membrane sensor signal transduction histidine kinase [Ktedonobacter racemifer DSM 44963] gi|297546693|gb|EFH80561.1| integral membrane sensor signal transduction histidine kinase [Ktedonobacter racemifer DSM 44963] Length = 546 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 8/55 (14%) Query: 30 LIENSLD-AESSR------VETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHC 76 L++N+L A + + + G+ Q+ DNG G+ ++P +R Sbjct: 443 LLDNALKYAPAKENGHGGIITVSLERKGQEALLQVRDNGIGIEPGDLPHIFERFY 497 >gi|240047186|ref|YP_002960574.1| DNA gyrase subunit B [Mycoplasma conjunctivae HRC/581] gi|239984758|emb|CAT04732.1| DNA gyrase subunit B [Mycoplasma conjunctivae] Length = 640 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 28/42 (66%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N++D A +++++ VI G + Q++DNG G+ ++ Sbjct: 42 EIVDNAVDEALAGFANQIDVVITKDG--YVQVSDNGRGIPTD 81 >gi|237741012|ref|ZP_04571493.1| DNA gyrase subunit B [Fusobacterium sp. 4_1_13] gi|229431056|gb|EEO41268.1| DNA gyrase subunit B [Fusobacterium sp. 4_1_13] Length = 635 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 75/204 (36%), Gaps = 23/204 (11%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE----------EIPMAVQR 74 E+++NS+D A ++E I ++ DNG G+ ++ EI + V Sbjct: 39 EIVDNSVDEALAGYCDKIEVKILPDNI--IEVIDNGRGIPTDIHPKYGKSALEIVLTVL- 95 Query: 75 HCTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRP 133 H K +D + + G G + + A+S L + R G + Sbjct: 96 HAGGKFENDNYKV-SGGLHGVGVSVVNALSEWLEVEVR----KNGTIHYQKYHRGKPEED 150 Query: 134 VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNR 193 V + V A ++ +++ ++ +A ++ T S ++ + Sbjct: 151 VKIIGACDVNEHGTIVRFKADAEIFETLIYNYFTLSNRLKELAYLNKGLTITLSDLRKDE 210 Query: 194 YKMNFQSTNGNFPERISQVIGEDF 217 K +G + +++++ +D Sbjct: 211 KKEETYKFDGGILDFLNEIVKDDT 234 >gi|170078507|ref|YP_001735145.1| heat shock protein 90 [Synechococcus sp. PCC 7002] gi|169886176|gb|ACA99889.1| heat shock protein [Synechococcus sp. PCC 7002] Length = 657 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 62/445 (13%), Positives = 124/445 (27%), Gaps = 61/445 (13%) Query: 27 IKELIENSLDA----------ESSRVE-----TVIA-GGGKSFFQITDNGFGMTSEEIPM 70 ++ELI N+ DA S V+ +I K ITDNG GMT++EI Sbjct: 32 LRELISNAADAITKRKMAKMAGESSVDVPDGEIIIDVNKEKKQLSITDNGIGMTADEIKK 91 Query: 71 AVQRHCTS----------KISDDFSNIHTFGFRGEALPSIGAVS-HLTLMS-RPPQNNTG 118 + + S K ++D GF S V+ + + + Sbjct: 92 YINQVAFSSAEEFIQKYGKDANDLIGHFGLGF-----YSAFMVATQVEINTLSCKDGAEA 146 Query: 119 AQIAIS-GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAI 177 + + + GT + + + ++E +E+ I +++ + Sbjct: 147 VHWSCDGSPEFQLSASDKTSIGTTITLTMM---------DEETEYLESQRIRQLVKTYSD 197 Query: 178 AYP-KVSFTFSTIKSNRYKMNFQS---TNGNFPERISQVIGEDFINNAVELNEKSNEITL 233 P + F I R T+ ++ E + L Sbjct: 198 FMPVAIRFEGEQINKQRAIWKESPQNLTDEDYLEFYRYLYPFQEDPLLWVHLNTDYPFLL 257 Query: 234 QGYTGIPTFNRG---NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEI 290 G P Q +F N V D E + R V + + Sbjct: 258 NGILYFPKLRPDIDVTKGQIKLFCNQVFVSD-----HCEEVIPEFLMPLRGVVDSTDIPL 312 Query: 291 DPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQDNA 350 + + + H I + + + ++ + S V + S + Sbjct: 313 NVSRSALTNHRTVRRISDYIAKKVGDRLKSLYNESYSDYVKSWEDVGTFVKYGSIRDEKF 372 Query: 351 PKT------HLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 K + + T K+ +Q N + + S+D + + Sbjct: 373 KKQVEDILIYRTTHQPETAATTPKVEVQGNDGDVWEDVKSEDTQATSTAPYTTLKDYLER 432 Query: 405 QLGIACAQIHQNYIISQTTDGLVIV 429 ++ S + + Sbjct: 433 NKEKHENRVFYCTDPSTQGTYIELY 457 >gi|88608222|ref|YP_506597.1| DNA gyrase, B subunit [Neorickettsia sennetsu str. Miyayama] gi|88600391|gb|ABD45859.1| DNA gyrase, B subunit [Neorickettsia sennetsu str. Miyayama] Length = 783 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 6/48 (12%) Query: 23 PSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E VI G + DNG GM ++ Sbjct: 37 LHQMVYEVVDNSVDESLAGYCTAIEVVIDVDG--SISVEDNGRGMPTD 82 >gi|167753935|ref|ZP_02426062.1| hypothetical protein ALIPUT_02220 [Alistipes putredinis DSM 17216] gi|167658560|gb|EDS02690.1| hypothetical protein ALIPUT_02220 [Alistipes putredinis DSM 17216] Length = 388 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 3/57 (5%) Query: 26 AIKELIENSLDA--ESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTSK 79 ++ LI+NSLDA R++ I+ K I D G G+ + T+K Sbjct: 287 VVENLIKNSLDALQGHGRIDVEISSDDKHVMIDIKDTGKGIPKSNWKRIFEPGFTTK 343 >gi|106734147|gb|ABF82550.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734153|gb|ABF82553.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734157|gb|ABF82555.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734159|gb|ABF82556.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734161|gb|ABF82557.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734165|gb|ABF82559.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734169|gb|ABF82561.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734171|gb|ABF82562.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734175|gb|ABF82564.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734177|gb|ABF82565.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734179|gb|ABF82566.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734181|gb|ABF82567.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734183|gb|ABF82568.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734185|gb|ABF82569.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734187|gb|ABF82570.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734193|gb|ABF82573.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734197|gb|ABF82575.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734207|gb|ABF82580.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734209|gb|ABF82581.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734211|gb|ABF82582.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734215|gb|ABF82584.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734217|gb|ABF82585.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734221|gb|ABF82587.1| DNA topoisomerase IV subunit beta [uncultured bacterium] Length = 47 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG G+ + Sbjct: 5 EIVDNSIDEALAGYCDTIKVTIEPG--NSILVEDNGRGIPVD 44 >gi|152984068|ref|YP_001345400.1| DNA gyrase subunit B [Pseudomonas aeruginosa PA7] gi|150959226|gb|ABR81251.1| DNA gyrase, B subunit [Pseudomonas aeruginosa PA7] Length = 806 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 76/247 (30%), Gaps = 25/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A S + I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGYCSEISITIHTD--ESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+SH L L R Q+ G +R V Sbjct: 102 AGGKFDDNTYKV-SGGLHGVGVSVVNALSHELRLTIRRHN-KVWEQVYHHGVPQFPLREV 159 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 G+ EV + +++ IR ++ V ++ + Sbjct: 160 GETDGSGTEVH-----FKPSPETFSNIHFSWDILAKRIRELSFLNSGVGILLRDERTGKE 214 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 ++ G + + N V E G +N F Sbjct: 215 ELFKY--EGGLKAFVEYLNTNKSAVNQVFHFNVQREEDGVGVEVALQWNDSFNENILCFT 272 Query: 255 NGRTVQD 261 N +D Sbjct: 273 NNIPQRD 279 >gi|37548745|gb|AAN07018.1| putative sensor kinase [Bacillus subtilis] Length = 466 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Query: 30 LIENSL---DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 LI N+L DA+ ++ + ++ I DNG G+ EE+ R+ Sbjct: 371 LILNALVHNDAD-VKIVVQLEQKERTHVTIKDNGKGIEEEELEKVFDRYY 419 >gi|89885793|ref|YP_515991.1| hypothetical protein Rfer_4307 [Rhodoferax ferrireducens T118] gi|89347791|gb|ABD71993.1| hypothetical protein Rfer_4307 [Rhodoferax ferrireducens T118] Length = 631 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMT 64 E + EL++N+ A ++R++ I I D+G G+T Sbjct: 31 ESSFSVLGELMQNARRAGATRIDFNI-DAEMKSLSIQDDGHGIT 73 >gi|84394122|ref|ZP_00992856.1| DNA gyrase subunit B [Vibrio splendidus 12B01] gi|84375268|gb|EAP92181.1| DNA gyrase subunit B [Vibrio splendidus 12B01] Length = 805 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 78/246 (31%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + + I S ++D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGHCNDIIVTIHED--SSVSVSDDGRGIPTELHPEEKVSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S ++ Q GE + + V Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSKQVTLTIHRGGKIHTQTYCHGEPQAPLAVVG 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T E+R P+ + + +++ +R ++ VS K K Sbjct: 159 DTDKTGTEIRF----WPSE-ETFNNIEFHYDILAKRLRELSFLNSGVSIKL-IDKREEDK 212 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 M+ G + + + +N G Y F N Sbjct: 213 MDHFEYEGGIQAFVEHLNTNKTPIIQKIFHFDHEREDGITVEVAMQWNDGYQENIYCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|313904177|ref|ZP_07837556.1| DNA topoisomerase (ATP-hydrolyzing) [Eubacterium cellulosolvens 6] gi|313470979|gb|EFR66302.1| DNA topoisomerase (ATP-hydrolyzing) [Eubacterium cellulosolvens 6] Length = 646 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 14/67 (20%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT--------SEEIPMAVQRHC 76 E+++NS+D A +++ V+ G +TD+G G+ E + H Sbjct: 43 EIVDNSVDEHLAGYCTKIRVVLEADG--SCTVTDDGRGIPVNMHEKGMPAERVVLTTLHA 100 Query: 77 TSKISDD 83 K +D Sbjct: 101 GGKFDND 107 >gi|311108764|ref|YP_003981617.1| HAMP domain-containing protein 16 [Achromobacter xylosoxidans A8] gi|310763453|gb|ADP18902.1| HAMP domain protein 16 [Achromobacter xylosoxidans A8] Length = 456 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 42/71 (59%), Gaps = 9/71 (12%) Query: 12 NQIAAGEI--IERPS--IAIKELIENSLD--AESSRVETVIAGGGKSFFQITDNGFGMTS 65 N+I+AG++ ++R + ++ L+ N+++ A ++ + IA G ++ D+G G+ + Sbjct: 317 NRISAGQVRSLDRYALLTVLRNLVRNAVEHAAPAT-LTASIAADGA--LELRDDGKGIAA 373 Query: 66 EEIPMAVQRHC 76 E++P +R+ Sbjct: 374 EDLPFLFRRYY 384 >gi|146328853|ref|YP_001209522.1| DNA gyrase, B subunit [Dichelobacter nodosus VCS1703A] gi|146232323|gb|ABQ13301.1| DNA gyrase, B subunit [Dichelobacter nodosus VCS1703A] Length = 800 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 2 KIRKLSEKIINQIAAGEIIER------PSIAIKELIENSLD---AE-SSRVETVIAGGGK 51 +IR L +I G I + E+++N++D A + + +I Sbjct: 8 RIRVLKGLEAVRIRPGMYIGNTDDGSGLHHMVFEVVDNAIDEALAGYCTEINVIIHQN-- 65 Query: 52 SFFQITDNGFGMTSE 66 + DNG G+ + Sbjct: 66 ESITVRDNGRGIPVD 80 >gi|116252718|ref|YP_768556.1| two-component sensor histidine kinase transcriptional regulatory protein [Rhizobium leguminosarum bv. viciae 3841] gi|115257366|emb|CAK08461.1| putative two-component sensor histidine kinase transcriptional regulatory protein [Rhizobium leguminosarum bv. viciae 3841] Length = 453 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 17/80 (21%) Query: 14 IAAG---------EIIER---PSI---AIKELIENSLDAE--SSRVETVIAGGGKSFFQI 56 I AG E +ER PS A+ L+ N++D S + ++ G + Sbjct: 326 ITAGYQICFQSKVESLERRGSPSALPRAVSNLVRNAIDHGGNSGMITVSVSASGAGRISV 385 Query: 57 TDNGFGMTSEEIPMAVQRHC 76 D G G+ +E + + Sbjct: 386 ADEGPGIPAEHRQLVFEPFY 405 >gi|77456970|ref|YP_346475.1| hypothetical protein Pfl01_0743 [Pseudomonas fluorescens Pf0-1] gi|77380973|gb|ABA72486.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 575 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 30/110 (27%) Query: 23 PSIAIKELIENSLDAESSRVETVIA---------GGGKSFFQITDNGFGMTSEEIPMAVQ 73 P AI ++I+NS+ AE+S + + S ++I D+G GM+ +EI A Sbjct: 27 PYTAIMDIIDNSVTAEASTISISVELRPGKTLKNRNSVSSYKIMDDGKGMSHDEIVNAFT 86 Query: 74 --------RHCTSKISDDFSNIH-TFGFRGEALPSIGAVSHLTLMSRPPQ 114 ++ SK + + G S +T+ S+ Sbjct: 87 LGSKRNYGKNSLSKYGMGLKSAGLSLG------------SKITITSKKDG 124 >gi|309780006|ref|ZP_07674759.1| sensor histidine kinase [Ralstonia sp. 5_7_47FAA] gi|308921176|gb|EFP66820.1| sensor histidine kinase [Ralstonia sp. 5_7_47FAA] Length = 669 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 14/64 (21%) Query: 30 LIENSLDA-------ESSRVETVI---AGGGKSF----FQITDNGFGMTSEEIPMAVQRH 75 LI N+LDA + R++ I G + DNG G+ + +P + Sbjct: 555 LIGNALDAINANEPVRAGRIDITIGPTEGAQAQSNQLTIAVRDNGPGIPPDAMPHLFEPF 614 Query: 76 CTSK 79 T+K Sbjct: 615 FTTK 618 >gi|291557755|emb|CBL34872.1| Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [Eubacterium siraeum V10Sc8a] Length = 185 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 5/51 (9%) Query: 31 IENSLDAESS--RVETVIA--GGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 ++NS+ A +S + I + I D+G GM+ E+ AV T Sbjct: 13 VQNSIGARASLVEITVSIDTTADTLTVI-IRDDGCGMSEAELSRAVDPFYT 62 >gi|291514712|emb|CBK63922.1| Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [Alistipes shahii WAL 8301] Length = 391 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 7/59 (11%) Query: 26 AIKELIENSLDA----ESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTSK 79 ++ L++NSLDA + ++ I+ +S + D G G+ + T+K Sbjct: 290 VVENLMKNSLDALQGHGA--IDVRISSDDRSVMIDVKDTGKGIPKSNWKRIFEPGFTTK 346 >gi|307728324|ref|YP_003905548.1| histidine kinase [Burkholderia sp. CCGE1003] gi|307582859|gb|ADN56257.1| histidine kinase [Burkholderia sp. CCGE1003] Length = 666 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + R+ +I G F + DNG G+ + +P + Sbjct: 546 RLEQVLINLLGNALDATAGMAAPRISVLIEVTAGSLSFAVGDNGPGIPEDVLPRLFEPFF 605 Query: 77 TSK 79 T+K Sbjct: 606 TTK 608 >gi|261403078|ref|YP_003247302.1| DNA topoisomerase VI, B subunit [Methanocaldococcus vulcanius M7] gi|261370071|gb|ACX72820.1| DNA topoisomerase VI, B subunit [Methanocaldococcus vulcanius M7] Length = 656 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Query: 20 IERPSIAIKELIENSLDA--ESS---RVETVIAGGGKS--FFQITDNGFGMTSEEIPMAV 72 I + I EL+ NSLDA E+ ++ I G + DNG G+ E IP Sbjct: 31 IRSLTTIIHELVTNSLDACEEAGILPDIKVEIEKLGADHYKVAVEDNGPGIPLEFIPKVF 90 >gi|186701799|ref|ZP_02971474.1| DNA topoisomerase IV, B subunit [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|186701080|gb|EDU19362.1| DNA topoisomerase IV, B subunit [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 642 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD----AESSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + ++ + + D+G G+ + Sbjct: 41 EIVDNSIDEVMNANAKNINVILHED--NSISVLDDGRGIPVD 80 >gi|183508547|ref|ZP_02958068.1| DNA topoisomerase IV, B subunit [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|182675987|gb|EDT87892.1| DNA topoisomerase IV, B subunit [Ureaplasma parvum serovar 14 str. ATCC 33697] Length = 642 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD----AESSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + ++ + + D+G G+ + Sbjct: 41 EIVDNSIDEVMNANAKNINVILHED--NSISVLDDGRGIPVD 80 >gi|167750762|ref|ZP_02422889.1| hypothetical protein EUBSIR_01740 [Eubacterium siraeum DSM 15702] gi|167656197|gb|EDS00327.1| hypothetical protein EUBSIR_01740 [Eubacterium siraeum DSM 15702] Length = 185 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 5/51 (9%) Query: 31 IENSLDAESS--RVETVIA--GGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 ++NS+ A +S + I + I D+G GM+ E+ AV T Sbjct: 13 VQNSIGARASLVEITVSIDTTADTLTVI-IRDDGCGMSEAELSRAVDPFYT 62 >gi|187927295|ref|YP_001897782.1| integral membrane sensor signal transduction histidine kinase [Ralstonia pickettii 12J] gi|187724185|gb|ACD25350.1| integral membrane sensor signal transduction histidine kinase [Ralstonia pickettii 12J] Length = 672 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 14/64 (21%) Query: 30 LIENSLDA-------ESSRVETVI---AGGGKSF----FQITDNGFGMTSEEIPMAVQRH 75 LI N+LDA + R++ I G + DNG G+ + +P + Sbjct: 558 LIGNALDAINANEPVRAGRIDITIGPTEGAQAQSNQLTIAVRDNGPGIPPDAMPHLFEPF 617 Query: 76 CTSK 79 T+K Sbjct: 618 FTTK 621 >gi|88602335|ref|YP_502513.1| DNA gyrase, B subunit [Methanospirillum hungatei JF-1] gi|88187797|gb|ABD40794.1| DNA gyrase subunit B [Methanospirillum hungatei JF-1] Length = 675 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + ++ VI G + DNG G+ + Sbjct: 44 VYEVVDNSIDEALAGYCTHIQVVIHQDG--SVSVEDNGRGIPID 85 >gi|13358029|ref|NP_078303.1| DNA topoisomerase IV subunit B [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170761866|ref|YP_001752551.1| DNA topoisomerase IV subunit B [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|11270883|pir||G82886 topoisomerase IV subunit B UU466 [imported] - Ureaplasma urealyticum gi|6899460|gb|AAF30878.1|AE002143_3 topoisomerase IV subunit B [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827443|gb|ACA32705.1| DNA topoisomerase IV, B subunit [Ureaplasma parvum serovar 3 str. ATCC 27815] Length = 642 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD----AESSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + ++ + + D+G G+ + Sbjct: 41 EIVDNSIDEVMNANAKNINVILHED--NSISVLDDGRGIPVD 80 >gi|225574001|ref|ZP_03782646.1| hypothetical protein RUMHYD_02097 [Blautia hydrogenotrophica DSM 10507] gi|225038731|gb|EEG48977.1| hypothetical protein RUMHYD_02097 [Blautia hydrogenotrophica DSM 10507] Length = 345 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 3/61 (4%) Query: 31 IENSLD--AESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNI 87 ++N+ D + ++ I DNG G+ E++P +R S+ S D + Sbjct: 246 VKNAFDHTEKGDTIQIEWKQFASVVQILIKDNGSGIHPEDLPHIFKRFYRSRFSQDVQGV 305 Query: 88 H 88 Sbjct: 306 G 306 >gi|185179126|ref|ZP_02964846.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024055|ref|ZP_02996806.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518297|ref|ZP_03003818.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|225550687|ref|ZP_03771636.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551068|ref|ZP_03772014.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|184208963|gb|EDU06006.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188019091|gb|EDU57131.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998169|gb|EDU67266.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|225378883|gb|EEH01248.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379841|gb|EEH02203.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 642 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD----AESSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + ++ + + D+G G+ + Sbjct: 41 EIVDNSIDEVMNANAKNINVILHED--NSISVLDDGRGIPVD 80 >gi|171920400|ref|ZP_02931723.1| DNA topoisomerase IV, B subunit [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902839|gb|EDT49128.1| DNA topoisomerase IV, B subunit [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 642 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD----AESSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + ++ + + D+G G+ + Sbjct: 41 EIVDNSIDEVMNANAKNINVILHED--NSISVLDDGRGIPVD 80 >gi|307543593|ref|YP_003896072.1| DNA gyrase subunit beta [Halomonas elongata DSM 2581] gi|307215617|emb|CBV40887.1| DNA gyrase, B subunit [Halomonas elongata DSM 2581] Length = 806 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 EL++NS+D A S + VI + DNG G+ +E Sbjct: 43 ELVDNSIDEALAGHCSEIGVVIHPD--ESITVRDNGRGIPTE 82 >gi|291556372|emb|CBL33489.1| PAS domain S-box [Eubacterium siraeum V10Sc8a] Length = 581 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 11/57 (19%) Query: 29 ELIEN----SL----DAESSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHC 76 EL+EN ++ D RVE ++ G + DNG G+ E + +R Sbjct: 472 ELVENIVSNAIKYNKDGG--RVEIMLHDVGETGCIYVRDNGIGIPKESLNRVFERFY 526 >gi|260463101|ref|ZP_05811304.1| heat shock protein Hsp90 [Mesorhizobium opportunistum WSM2075] gi|259031222|gb|EEW32495.1| heat shock protein Hsp90 [Mesorhizobium opportunistum WSM2075] Length = 628 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 52/148 (35%), Gaps = 41/148 (27%) Query: 27 IKELIENSLDAE--------------SS----RVETVIAGGGKSFFQITDNGFGMTSEEI 68 ++ELI N+ DA + R+ K + DNG GM+ +++ Sbjct: 36 LRELISNAADACEKLRFEAVSRPELLADDPKPRISISADPDNKQ-ITVEDNGIGMSRDDM 94 Query: 69 PMAV------------QRHCTSKISDDFSNIHTF--GFRGEALPSIGAVS-HLTLMSRPP 113 A+ +R +S ++D I F GF S V+ + ++SR Sbjct: 95 AEALGTIARSGTRAFIERVGSS--TEDTQLIGQFGVGF-----YSAFMVADRVDVVSRLA 147 Query: 114 QNNTGAQIAISGEKISSVRPVAMNPGTI 141 + + + G+ + P + Sbjct: 148 GSEEAWRWSSDGKGSYEIAPAPLEAAPR 175 >gi|258622308|ref|ZP_05717334.1| C4-dicarboxylate transport sensor protein [Vibrio mimicus VM573] gi|258585632|gb|EEW10355.1| C4-dicarboxylate transport sensor protein [Vibrio mimicus VM573] Length = 669 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 21 ERPSIAIKELIENSLDA-ESS-----RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 +R + L+ N+LDA + + V +++DNG G+ E + + Sbjct: 562 QRLRQVLGNLVSNALDAMGKTPEPKLSISAVSEEHQV-IVRVSDNGCGIAPELLTTMFEP 620 Query: 75 HCTSK 79 TSK Sbjct: 621 FQTSK 625 >gi|239907953|ref|YP_002954694.1| two-component sensor histidine kinase [Desulfovibrio magneticus RS-1] gi|239797819|dbj|BAH76808.1| two-component sensor histidine kinase [Desulfovibrio magneticus RS-1] Length = 821 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Query: 23 PSIAIKELIENSLDA---ESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 + L+ N+LDA R+ GG+ + DNG G+ + ++P Sbjct: 709 LEQVLSNLLLNALDAVEPGQGRITLAAAASEDGGQVNLTVADNGPGIPAVDLPHIFDPFF 768 Query: 77 TSK 79 T+K Sbjct: 769 TTK 771 >gi|170077957|ref|YP_001734595.1| DNA gyrase subunit B [Synechococcus sp. PCC 7002] gi|169885626|gb|ACA99339.1| DNA gyrase, B subunit [Synechococcus sp. PCC 7002] Length = 640 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 81/246 (32%), Gaps = 25/246 (10%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQ--------- 73 + E+++NS+D A + + I G +TDNG G+ + P + Sbjct: 39 VYEVVDNSVDEALAGYCTEINVEINADG--SVTVTDNGRGIPVDVHPSTGKSALETVMTV 96 Query: 74 RHCTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQN--NTGAQIAISGEKISS 130 H K + + G G + + A+S + + + + + +++ Sbjct: 97 LHAGGKFGAGGYKV-SGGLHGVGVSVVNALSEWVEVTVWRDETTYKQRYERGVPQGELTE 155 Query: 131 VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 GT V +P F ++ + N + +R +A V F+ + Sbjct: 156 APAPQHLSGTSVCF------LPDAKIFTETTVFDYNTLAGRLRELAYLNAGVRIVFTDHR 209 Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQF 250 S + N G E ++ + E + + + +Q + ++ Sbjct: 210 SEKQASNTYFYEGGIKEYVAYMNREKSPLHEEIIYVTGEKNGVQLEVALQWCTDAYSDNL 269 Query: 251 YVFING 256 F N Sbjct: 270 LGFANN 275 >gi|91794568|ref|YP_564219.1| DNA topoisomerase IV subunit B [Shewanella denitrificans OS217] gi|91716570|gb|ABE56496.1| DNA topoisomerase IV subunit B [Shewanella denitrificans OS217] Length = 628 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 76/205 (37%), Gaps = 23/205 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EI 68 RP+ +E+I+NS+D A ++++E V+ + ++TD+G GM + + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHATKIEVVLHSD--NSLEVTDDGRGMPVDIHQEEGMSGV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + + H K S+ + G G + + A+S + + R +G Sbjct: 88 ELILTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEITVR-RDAQVYEMAFENGF 145 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 K+ + R F+ P+ + S + ++R A+ P + F Sbjct: 146 KVEELTVTGTCGRRNTGTRVHFWPDPS---YFDSANYSLTKLIYLLRAKAVLCPGLRIKF 202 Query: 187 STIKSNRYKMNFQSTNGNFPERISQ 211 + + + + + + Sbjct: 203 TN--KQNGETHEWCYESGLTDYLQE 225 >gi|323462873|pdb|3LNU|A Chain A, Crystal Structure Of Pare Subunit gi|323462877|pdb|3LPS|A Chain A, Crystal Structure Of Pare Length = 408 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + ++E + G +++D+G GM EE + Sbjct: 50 RPNHLAQEVIDNSVDEALAGHAKQIEVTLYKDG--SCEVSDDGRGMPVDIHPEEKIPGVE 107 Query: 70 MAVQR-HCTSKISD 82 + + R H K ++ Sbjct: 108 LILTRLHAGGKFNN 121 >gi|288925541|ref|ZP_06419474.1| DNA gyrase, B subunit [Prevotella buccae D17] gi|315606674|ref|ZP_07881685.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella buccae ATCC 33574] gi|288337757|gb|EFC76110.1| DNA gyrase, B subunit [Prevotella buccae D17] gi|315251684|gb|EFU31662.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella buccae ATCC 33574] Length = 656 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 6/49 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 + E ++NS+D A +E I + + D+G G+ +E Sbjct: 45 VNETVDNSIDEAMAGYCKNIEVTINED--NSITVQDDGRGIPVDEHKKL 91 >gi|256810097|ref|YP_003127466.1| DNA topoisomerase VI, B subunit [Methanocaldococcus fervens AG86] gi|256793297|gb|ACV23966.1| DNA topoisomerase VI, B subunit [Methanocaldococcus fervens AG86] Length = 656 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Query: 20 IERPSIAIKELIENSLDA--ESS---RVETVIAGGGKS--FFQITDNGFGMTSEEIPMAV 72 I + I EL+ NSLDA E+ ++ I G + DNG G+ E IP Sbjct: 31 IRSLTTIIHELVTNSLDACEEAGILPDIKVEIEKLGADHYKVAVEDNGPGIPLEFIPKVF 90 >gi|297588713|ref|ZP_06947356.1| sensor histidine kinase KdpD [Finegoldia magna ATCC 53516] gi|297574086|gb|EFH92807.1| sensor histidine kinase KdpD [Finegoldia magna ATCC 53516] Length = 642 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 7/65 (10%) Query: 30 LIENSL---DAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS--KISDD 83 L++N++ D S + + QI D+G G+ + ++ TS KISD+ Sbjct: 543 LVDNAIKYTDEGS-NILIKAFKKDENTIIQICDDGNGIRDNDKEKIFRKFYTSNDKISDN 601 Query: 84 FSNIH 88 +I Sbjct: 602 KRSIG 606 >gi|227498001|ref|ZP_03928177.1| possible histidine kinase [Actinomyces urogenitalis DSM 15434] gi|226832591|gb|EEH64974.1| possible histidine kinase [Actinomyces urogenitalis DSM 15434] Length = 607 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 10/85 (11%) Query: 20 IERPSIAIKELIENSLD-AESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCT 77 +ER ++ L+ N+L+ AE ++++ +AG + ++ D+G GMT E R Sbjct: 380 VER---IVRNLLLNALEHAEGTQIDLTVAGDEVAVAVRVRDHGVGMTPEVASKVFDRFY- 435 Query: 78 SKISDDFSNIHTFGFRGEALPSIGA 102 D S T G G L SI + Sbjct: 436 ---RADTSRQRTLGGSGLGL-SIAS 456 >gi|166712481|ref|ZP_02243688.1| DNA topoisomerase IV subunit B [Xanthomonas oryzae pv. oryzicola BLS256] Length = 629 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + ++E + G +++D+G GM EE + Sbjct: 31 RPNHLAQEVIDNSVDEALAGHAKQIEVTLYKDG--SCEVSDDGRGMPVDIHPEEKIPGVE 88 Query: 70 MAVQR-HCTSKISD 82 + + R H K ++ Sbjct: 89 LILTRLHAGGKFNN 102 >gi|157963372|ref|YP_001503406.1| DNA topoisomerase IV subunit B [Shewanella pealeana ATCC 700345] gi|157848372|gb|ABV88871.1| DNA topoisomerase IV, B subunit [Shewanella pealeana ATCC 700345] Length = 631 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 66/209 (31%), Gaps = 33/209 (15%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A +SR++ ++ + ++ D+G GM EE + Sbjct: 34 RPNHLGQEVIDNSVDEALAGHASRIDVILHAD--NSLEVIDDGRGMPVDIHPEEGIPGVE 91 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + + + H K S+ + G G AL S + + R Sbjct: 92 LILTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSS-----RVEITVRRNAEVYEMAFE 145 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + + ++ S + +T +++ A+ P + Sbjct: 146 HGEKVEDLHVTGTCGRRNTGTSVHFW----PDASYFDSGNFSISKLTYLLKAKAVLCPGL 201 Query: 183 SFTFSTIKSNRYKMNFQSTNGNFPERISQ 211 F + + + Sbjct: 202 RIKFVN--KQTNETQEWFYESGLEDYLRS 228 >gi|58582592|ref|YP_201608.1| DNA topoisomerase IV subunit B [Xanthomonas oryzae pv. oryzae KACC10331] gi|58427186|gb|AAW76223.1| topoisomerase IV subunit B [Xanthomonas oryzae pv. oryzae KACC10331] Length = 673 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + ++E + G +++D+G GM EE + Sbjct: 75 RPNHLAQEVIDNSVDEALAGHAKQIEVTLYKDG--SCEVSDDGRGMPVDIHPEEKIPGVE 132 Query: 70 MAVQR-HCTSKISD 82 + + R H K ++ Sbjct: 133 LILTRLHAGGKFNN 146 >gi|84624476|ref|YP_451848.1| DNA topoisomerase IV subunit B [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575893|ref|YP_001912822.1| DNA topoisomerase IV subunit B [Xanthomonas oryzae pv. oryzae PXO99A] gi|84368416|dbj|BAE69574.1| topoisomerase IV subunit B [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188520345|gb|ACD58290.1| DNA topoisomerase IV, B subunit [Xanthomonas oryzae pv. oryzae PXO99A] Length = 629 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + ++E + G +++D+G GM EE + Sbjct: 31 RPNHLAQEVIDNSVDEALAGHAKQIEVTLYKDG--SCEVSDDGRGMPVDIHPEEKIPGVE 88 Query: 70 MAVQR-HCTSKISD 82 + + R H K ++ Sbjct: 89 LILTRLHAGGKFNN 102 >gi|13124830|sp|Q58434|TOP6B_METJA RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B Length = 660 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Query: 20 IERPSIAIKELIENSLDA--ESS---RVETVIAGGGKS--FFQITDNGFGMTSEEIPMAV 72 I + I EL+ NSLDA E+ ++ I G + DNG G+ E IP Sbjct: 35 IRSLTTIIHELVTNSLDACEEAGILPDIKVEIEKLGADHYKVAVEDNGPGIPLEFIPKVF 94 >gi|300853844|ref|YP_003778828.1| putative two component sensor kinase [Clostridium ljungdahlii DSM 13528] gi|300433959|gb|ADK13726.1| predicted two component sensor kinase [Clostridium ljungdahlii DSM 13528] Length = 309 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 30 LIENSLD--AESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 LI N+L + ++++ ++ F + DNG G+ E++P R T Sbjct: 206 LINNALKYGSHATKIGIDLSCDNDNVFISVWDNGPGIPKEDLPYVFDRLYT 256 >gi|148762423|dbj|BAF63913.1| DNA gyrase subunit B [Virgibacillus proomii] Length = 404 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A R+E ++ + + DNG G+ + Sbjct: 13 EIIDNSIDEALAGYCDRIEVIVEKD--NSITVKDNGRGIPVD 52 >gi|86141045|ref|ZP_01059604.1| nitrogen regulation protein NtrY, putative [Leeuwenhoekiella blandensis MED217] gi|85832987|gb|EAQ51436.1| nitrogen regulation protein NtrY, putative [Leeuwenhoekiella blandensis MED217] Length = 487 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 25/61 (40%), Gaps = 9/61 (14%) Query: 26 AIKELIENSLDAESS------RVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 + L++N++ +++ ++ I + DNG G+ E I + T+ Sbjct: 386 VVTNLVKNAI--QATEGVQDPKIRVEIKSDVDTVCILVCDNGHGIPEENIEKVFEPKFTT 443 Query: 79 K 79 K Sbjct: 444 K 444 >gi|331700400|ref|YP_004397359.1| DNA gyrase subunit B [Lactobacillus buchneri NRRL B-30929] gi|329127743|gb|AEB72296.1| DNA gyrase, B subunit [Lactobacillus buchneri NRRL B-30929] Length = 647 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N +D A ++++ + + +TD+G G+ + Sbjct: 51 EIVDNGIDEALAGFATKITVTVEKD--NSITVTDDGRGIPVD 90 >gi|269127382|ref|YP_003300752.1| signal transduction histidine kinase, LytS [Thermomonospora curvata DSM 43183] gi|268312340|gb|ACY98714.1| signal transduction histidine kinase, LytS [Thermomonospora curvata DSM 43183] Length = 411 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 7/50 (14%) Query: 30 LIENSL-----D-AESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAV 72 L+EN++ D A + + G + D+G GM E + + Sbjct: 289 LVENAVRHGLQDRAGPGHITIIAEDAGADAVISVEDDGVGMDPERLRKIL 338 >gi|227508132|ref|ZP_03938181.1| DNA gyrase, B subunit [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227523343|ref|ZP_03953392.1| DNA gyrase, B subunit [Lactobacillus hilgardii ATCC 8290] gi|227089449|gb|EEI24761.1| DNA gyrase, B subunit [Lactobacillus hilgardii ATCC 8290] gi|227192361|gb|EEI72428.1| DNA gyrase, B subunit [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 647 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N +D A ++++ + + +TD+G G+ + Sbjct: 51 EIVDNGIDEALAGFATKITVTVEKD--NSITVTDDGRGIPVD 90 >gi|227511156|ref|ZP_03941205.1| DNA gyrase, B subunit [Lactobacillus buchneri ATCC 11577] gi|227085638|gb|EEI20950.1| DNA gyrase, B subunit [Lactobacillus buchneri ATCC 11577] Length = 647 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N +D A ++++ + + +TD+G G+ + Sbjct: 51 EIVDNGIDEALAGFATKITVTVEKD--NSITVTDDGRGIPVD 90 >gi|331266709|ref|YP_004326339.1| DNA gyrase, B subunit [Streptococcus oralis Uo5] gi|326683381|emb|CBZ00999.1| DNA gyrase, B subunit [Streptococcus oralis Uo5] Length = 648 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--NSITVVDDGRGIPVD 88 >gi|315612864|ref|ZP_07887775.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis ATCC 49296] gi|315314974|gb|EFU63015.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sanguinis ATCC 49296] Length = 648 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--NSITVVDDGRGIPVD 88 >gi|307709096|ref|ZP_07645555.1| DNA gyrase, B subunit [Streptococcus mitis SK564] gi|307620042|gb|EFN99159.1| DNA gyrase, B subunit [Streptococcus mitis SK564] Length = 648 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--NSITVVDDGRGIPVD 88 >gi|307708511|ref|ZP_07644976.1| DNA gyrase, B subunit [Streptococcus mitis NCTC 12261] gi|307615427|gb|EFN94635.1| DNA gyrase, B subunit [Streptococcus mitis NCTC 12261] Length = 648 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--NSITVVDDGRGIPVD 88 >gi|293365094|ref|ZP_06611811.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus oralis ATCC 35037] gi|307702197|ref|ZP_07639157.1| DNA gyrase, B subunit [Streptococcus oralis ATCC 35037] gi|322374607|ref|ZP_08049121.1| DNA gyrase, B subunit [Streptococcus sp. C300] gi|291316544|gb|EFE56980.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus oralis ATCC 35037] gi|307624210|gb|EFO03187.1| DNA gyrase, B subunit [Streptococcus oralis ATCC 35037] gi|321280107|gb|EFX57146.1| DNA gyrase, B subunit [Streptococcus sp. C300] Length = 648 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--NSITVVDDGRGIPVD 88 >gi|270293047|ref|ZP_06199258.1| DNA gyrase subunit B [Streptococcus sp. M143] gi|270279026|gb|EFA24872.1| DNA gyrase subunit B [Streptococcus sp. M143] Length = 648 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVFIEPD--NSITVVDDGRGIPVD 88 >gi|257437729|ref|ZP_05613484.1| DNA gyrase, B subunit [Faecalibacterium prausnitzii A2-165] gi|257200036|gb|EEU98320.1| DNA gyrase, B subunit [Faecalibacterium prausnitzii A2-165] Length = 664 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A + +E I Q+TDNG G+ + Sbjct: 53 VYEIVDNAIDEALAGYCNHIEVKILKNNI--IQVTDNGRGIPVD 94 >gi|98991106|gb|ABF60571.1| DNA gyrase subunit B [Spiroplasma melliferum KC3] Length = 558 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 36/246 (14%), Positives = 84/246 (34%), Gaps = 29/246 (11%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EIPMAVQ-RH 75 E+++NS+D A +++++ ++ + DNG G+ E + H Sbjct: 14 EIVDNSIDEVLANFANKIKIILNKD--ESITVIDNGRGIPIEIHPKTKVSTLETVFTILH 71 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K + I + G G + A+S L + R + G+ ++ ++ V Sbjct: 72 AGGKFDSNTYKI-SGGLHGVGASVVNALSKYLKVEVRKNNKKYVMEFHNGGQILTPIKEV 130 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFST----IK 190 T V +P F ++ + I + I+++A + + + Sbjct: 131 GSTSETGTTVTF----LPDEKIFKETTIFSFSTIQNRIKQLAFLNKGLEISLVDLREEDE 186 Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQF 250 F + ++ +++ IG + + N + G +N + Sbjct: 187 EKTVLYQFNNGIKDYVLELNKTIGTPLNDVFYVEGIEDNIVVEFGL----QYNDNYSENI 242 Query: 251 YVFING 256 + F N Sbjct: 243 FSFCNN 248 >gi|27530058|dbj|BAC53884.1| DNA gyrase B subunit [Legionella jamestowniensis] Length = 285 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + ++ I G + D+G G+ + Sbjct: 7 EVVDNSIDEALAGYCTEIQVTIH--GDESITVKDDGRGIPVD 46 >gi|329121792|ref|ZP_08250408.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Dialister micraerophilus DSM 19965] gi|327468065|gb|EGF13553.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Dialister micraerophilus DSM 19965] Length = 646 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + +E + G + DNG G+ Sbjct: 52 VYEVVDNSIDEALAGFCTHIEVSLNDDG--SCTVVDNGRGIP 91 >gi|332716087|ref|YP_004443553.1| C4-dicarboxylate transport sensor protein [Agrobacterium sp. H13-3] gi|325062772|gb|ADY66462.1| C4-dicarboxylate transport sensor protein [Agrobacterium sp. H13-3] Length = 633 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 16/80 (20%) Query: 30 LIENSLDA----ESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK----- 79 L++N+L+A +++RVE + G ++DNG G+ TSK Sbjct: 539 LLQNALEATEAIDAARVEVRVREEGDMVLLSVSDNGTGIPEAIRAQLFSPFNTSKESGLG 598 Query: 80 ----ISDDFSNIHTFGFRGE 95 IS+D ++ +G R E Sbjct: 599 LGLVISNDIAS--DYGGRIE 616 >gi|313892202|ref|ZP_07825795.1| DNA gyrase, B subunit [Dialister microaerophilus UPII 345-E] gi|313119340|gb|EFR42539.1| DNA gyrase, B subunit [Dialister microaerophilus UPII 345-E] Length = 646 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + +E + G + DNG G+ Sbjct: 52 VYEVVDNSIDEALAGFCTHIEVSLNDDG--SCTVVDNGRGIP 91 >gi|289193111|ref|YP_003459052.1| DNA topoisomerase VI, B subunit [Methanocaldococcus sp. FS406-22] gi|288939561|gb|ADC70316.1| DNA topoisomerase VI, B subunit [Methanocaldococcus sp. FS406-22] Length = 656 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Query: 20 IERPSIAIKELIENSLDA--ESS---RVETVIAGGGKS--FFQITDNGFGMTSEEIPMAV 72 I + I EL+ NSLDA E+ ++ I G + DNG G+ E IP Sbjct: 31 IRSLTTIIHELVTNSLDACEEAGILPDIKVEIEKLGADHYKVAVEDNGPGIPLEFIPKVF 90 >gi|126663049|ref|ZP_01734047.1| sensor histidine kinase [Flavobacteria bacterium BAL38] gi|126624707|gb|EAZ95397.1| sensor histidine kinase [Flavobacteria bacterium BAL38] Length = 385 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 7/55 (12%) Query: 30 LIENSLDA----ESSRVET-VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N++DA S + + +ITD G G+ + + T+K Sbjct: 287 LVKNAIDAMKGKGSLNIAISELED--IVKIKITDTGKGIPKNQFSKVFEPGFTTK 339 >gi|42524272|ref|NP_969652.1| DNA topoisomerase VI subunit B [Bdellovibrio bacteriovorus HD100] gi|39576480|emb|CAE80645.1| type II DNA topoisomerase VI, subunit B [Bdellovibrio bacteriovorus HD100] Length = 589 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 14/68 (20%) Query: 27 IKELIENSLDAESSR-------VETVIAGGGKS------FFQITDNGFGMTSEEIPMAVQ 73 +KE ++NSLDA S VE G G + + DNG G+ E++ Sbjct: 33 LKEAVDNSLDACESAGILPDLLVEISKVGAGSTKNTDLIRIVVEDNGPGIEGEDLAKVYG 92 Query: 74 RH-CTSKI 80 + +SK Sbjct: 93 EYLASSKF 100 >gi|154245498|ref|YP_001416456.1| integral membrane sensor signal transduction histidine kinase [Xanthobacter autotrophicus Py2] gi|154159583|gb|ABS66799.1| integral membrane sensor signal transduction histidine kinase [Xanthobacter autotrophicus Py2] Length = 529 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 14/83 (16%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSLDA--ES----SRVETVI-AGGGKSFFQI 56 RKL + +++ I +++ LI N++D+ + ++ GGG+ ++ Sbjct: 405 RKLPQAVVDPIELEQVLHN-------LIRNAVDSLDGAAQPEKKIVIRTGTGGGQVEIRV 457 Query: 57 TDNGFGMTSEEIPMAVQRHCTSK 79 D G G+ +P + T+K Sbjct: 458 ADTGPGIAPAVLPRLFEPFFTTK 480 >gi|116753912|ref|YP_843030.1| DNA topoisomerase VI subunit B [Methanosaeta thermophila PT] gi|116665363|gb|ABK14390.1| DNA topoisomerase VI, B subunit [Methanosaeta thermophila PT] Length = 613 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 6/54 (11%) Query: 25 IAIKELIENSLDA--ESS---RVETVIAGGG-KSFFQITDNGFGMTSEEIPMAV 72 +KE ++NSLDA ++ + I G + DNG G+ EIP Sbjct: 38 TCVKEAVDNSLDACEDAGILPDIFVQIKRTGELYRVIVEDNGPGIVPSEIPRVF 91 >gi|301057364|ref|ZP_07198482.1| PAS domain S-box protein [delta proteobacterium NaphS2] gi|300448594|gb|EFK12241.1| PAS domain S-box protein [delta proteobacterium NaphS2] Length = 879 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 26/95 (27%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKE---LIENSLDA--ESSRVET--------------- 44 +L E + N I +G P +K L+ N+ +A S V Sbjct: 598 QLDENLKN-I-SG----SPVHILKAVMNLVANASEAISGSGNVTIGTMHRSIDHPVRGYD 651 Query: 45 VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 + G S +TD+G G++ +++ + T K Sbjct: 652 DVEIGEYSVLSVTDDGSGISPDDLERIFEPFYTKK 686 >gi|148252728|ref|YP_001237313.1| hypothetical protein BBta_1158 [Bradyrhizobium sp. BTAi1] gi|146404901|gb|ABQ33407.1| hypothetical protein BBta_1158 [Bradyrhizobium sp. BTAi1] Length = 971 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 9/87 (10%) Query: 10 IINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 I+ + G+I + P A+ EL +N+ DA + V I GG + D+G GM+ E+ Sbjct: 13 TIDHLGRGQIADAP-TAVSELWKNAYDAYAKNVALHIFGGSPEVAAVFDDGIGMSRED-- 69 Query: 70 MAVQR----HCTSKISD-DFSNIHTFG 91 +QR SK + D + TFG Sbjct: 70 -VIQRWLVIGTESKFDNADTTPPETFG 95 >gi|85058249|ref|YP_453951.1| DNA topoisomerase IV subunit B [Sodalis glossinidius str. 'morsitans'] gi|84778769|dbj|BAE73546.1| topoisomerase IV subunit B [Sodalis glossinidius str. 'morsitans'] Length = 631 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 72/207 (34%), Gaps = 23/207 (11%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + R++ ++ ++TD+G GM EE + Sbjct: 32 RPNHLGQEVIDNSVDEALAGHARRIDVILHPD--QSLEVTDDGRGMPVDIHPEEGVPAVE 89 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEK 127 + + R H K S+ + G G + + A+S + + R N + Sbjct: 90 LILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSTRVEVTVRRNGNVYRIAFENGDKV 148 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--FT 185 + +F S + + +T +++ A+ P V F Sbjct: 149 EDLSVVGTCPKRNTGTSVHFW----PDEHFFDSPRFSVSRLTHLLKAKAVLCPGVEIVFQ 204 Query: 186 FSTIKSNRYKMNFQSTNGNFPERISQV 212 + + E I+ + Sbjct: 205 DRVNNTEQRWCYEAGLTDYLNEAINGL 231 >gi|116619148|ref|YP_821304.1| DNA gyrase subunit B [Candidatus Solibacter usitatus Ellin6076] gi|116222310|gb|ABJ81019.1| DNA gyrase subunit B [Candidatus Solibacter usitatus Ellin6076] Length = 815 Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 82/248 (33%), Gaps = 26/248 (10%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAV-----Q 73 + E+++NS+D A ++ +E I + + D+G G+ EE A + Sbjct: 49 VYEVVDNSVDEALAGYATHIEVTIHDD--NSVTVEDDGRGIPVGIHEEEGVSAAQVVMTK 106 Query: 74 RHCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVR 132 H K + + + G G + + A+S L L + + K VR Sbjct: 107 LHAGGKFDSNSYKV-SGGLHGVGVSCVNALSEKLELEIWREGYTWTQEYSCGKPKADLVR 165 Query: 133 PVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSN 192 T V + + + + +R +A + T + + + Sbjct: 166 AGKAGKRTGTRVTFKPDSTIMEVAVF-----NYDTLAQRLRELAFLNKGLKITLTDERVD 220 Query: 193 RYKMNFQSTNGNFPERISQVI-GEDFINNAVELNEKSNEITLQGYTGIP---TFNRGNAN 248 K+ G E I + G+ ++ E E+ +G + +N + Sbjct: 221 PEKVTPFEYQGGISEFIKHLNRGKSVLHEKPIHFEAEREMPEKGTITMEVALQYNDAYSE 280 Query: 249 QFYVFING 256 + F N Sbjct: 281 NVFSFANN 288 >gi|332881729|ref|ZP_08449377.1| DNA gyrase, B subunit [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680368|gb|EGJ53317.1| DNA gyrase, B subunit [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 655 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E ++NS+D A + +E I + + DNG G+ + Sbjct: 45 VYETVDNSIDEALAGYCTHIEVTINED--NSITVQDNGRGIPVD 86 >gi|330997801|ref|ZP_08321636.1| DNA gyrase, B subunit [Paraprevotella xylaniphila YIT 11841] gi|329569689|gb|EGG51454.1| DNA gyrase, B subunit [Paraprevotella xylaniphila YIT 11841] Length = 655 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E ++NS+D A + +E I + + DNG G+ + Sbjct: 45 VYETVDNSIDEALAGYCTHIEVTINED--NSITVQDNGRGIPVD 86 >gi|325567637|ref|ZP_08144304.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus casseliflavus ATCC 12755] gi|325159070|gb|EGC71216.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Enterococcus casseliflavus ATCC 12755] Length = 649 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ +I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASSIQVIIEPD--NSITVVDDGRGIPVD 90 >gi|269314035|gb|ACZ36919.1| DNA gyrase B [Mycobacterium chelonae] Length = 651 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 8/41 (19%) Query: 29 ELIENSLD---AE-SSRVETV-IAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ VE + GG Q+ D+G G+ Sbjct: 37 EVVDNSVDEAMAGYATTVEVTMLEDGG---IQVKDDGRGIP 74 >gi|258624825|ref|ZP_05719753.1| C4-dicarboxylate transport sensor protein [Vibrio mimicus VM603] gi|258582823|gb|EEW07644.1| C4-dicarboxylate transport sensor protein [Vibrio mimicus VM603] Length = 669 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 7/65 (10%) Query: 21 ERPSIAIKELIENSLDA-ESS-----RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 +R + L+ N+LDA + + V +++DNG G+ E + + Sbjct: 562 QRLRQVLGNLVSNALDAMGKTPEPKLSISAVSEEHQV-IVRVSDNGCGIAPELLTTMFEP 620 Query: 75 HCTSK 79 TSK Sbjct: 621 FQTSK 625 >gi|257875897|ref|ZP_05655550.1| DNA gyrase B subunit [Enterococcus casseliflavus EC20] gi|257810063|gb|EEV38883.1| DNA gyrase B subunit [Enterococcus casseliflavus EC20] Length = 649 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ +I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASSIQVIIEPD--NSITVVDDGRGIPVD 90 >gi|257866280|ref|ZP_05645933.1| DNA gyrase B subunit [Enterococcus casseliflavus EC30] gi|257873204|ref|ZP_05652857.1| DNA gyrase B subunit [Enterococcus casseliflavus EC10] gi|257800238|gb|EEV29266.1| DNA gyrase B subunit [Enterococcus casseliflavus EC30] gi|257807368|gb|EEV36190.1| DNA gyrase B subunit [Enterococcus casseliflavus EC10] Length = 649 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ +I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASSIQVIIEPD--NSITVVDDGRGIPVD 90 >gi|254453955|ref|ZP_05067392.1| DNA topoisomerase IV, B subunit [Octadecabacter antarcticus 238] gi|198268361|gb|EDY92631.1| DNA topoisomerase IV, B subunit [Octadecabacter antarcticus 238] Length = 703 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A ++ +E + G + DNG G+ Sbjct: 99 VAEIVDNSMDEAVAGHATWIEVELHANG--HVTVRDNGRGIP 138 >gi|117926310|ref|YP_866927.1| multi-sensor signal transduction histidine kinase [Magnetococcus sp. MC-1] gi|117610066|gb|ABK45521.1| multi-sensor signal transduction histidine kinase [Magnetococcus sp. MC-1] Length = 801 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 24/102 (23%) Query: 5 KLSEKIINQIA-AGEII-ERPSIAIKELIENSLDAESSRVETVI--AGGGKSFFQITDNG 60 +L + +IN I + E I +R S D + + V GG Q+ DNG Sbjct: 682 QLLQLVINLIKNSQEAIGQRLST----------DPAAGWIHIVARRDEGGGLMLQVQDNG 731 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGA 102 G+ E++ + T+K N T GF L S + Sbjct: 732 CGIAPEQVAHVFRFGYTTK------NRGT-GF---GLHSAAS 763 >gi|315441702|ref|YP_004074581.1| DNA gyrase subunit B [Mycobacterium sp. Spyr1] gi|315260005|gb|ADT96746.1| DNA gyrase subunit B [Mycobacterium sp. Spyr1] Length = 675 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 58/179 (32%), Gaps = 37/179 (20%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE---------EIPMAVQR 74 E+++N++D A +++V+ I GG Q+TD+G G+ ++ M V Sbjct: 48 EVVDNAVDEAMAGFATKVDVRILEDGG---VQVTDDGRGIPVSMHSTGIPTIDVVMTVL- 103 Query: 75 HCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKI 128 H K + + + G G AL S L R + S Sbjct: 104 HAGGKFEEGAYQV-SGGLHGVGVSVVNALSS-----RLEADVRKDGHEWFQTYDRSVPGT 157 Query: 129 SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFS 187 GT + A ++ + I ++ MA ++ + Sbjct: 158 LRKGDPTDKTGTTIRFW-------ADPEIFETTNYDFETIARRLQEMAFLNKGLTIELT 209 >gi|315124260|ref|YP_004066264.1| hypothetical protein ICDCCJ07001_699 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017982|gb|ADT66075.1| hypothetical protein ICDCCJ07001_699 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 633 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 8/60 (13%) Query: 10 IINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAG------GGKS-FFQITDNGFG 62 + I + I R + I E I+N++DA+++R++ GK I DNG G Sbjct: 9 TVKTIKSDSTIMRLNP-ISEAIKNAIDAKATRIDICFEECEGNSLFGKGISISIKDNGAG 67 >gi|312138293|ref|YP_004005629.1| two component system sensor kinase [Rhodococcus equi 103S] gi|311887632|emb|CBH46944.1| putative two component system sensor kinase [Rhodococcus equi 103S] Length = 545 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 7/64 (10%) Query: 23 PSIAIKELIENSLDA-----ESS-RVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 + L++N++DA ++ VE + ++ D+G GM + + A R Sbjct: 423 LVTVVGNLVDNAIDAARSEGDARPWVEVTVTEEDSMLVIRVADSGPGMDPDALAQATTRG 482 Query: 76 CTSK 79 ++K Sbjct: 483 YSTK 486 >gi|229135508|ref|ZP_04264294.1| hypothetical protein bcere0014_44020 [Bacillus cereus BDRD-ST196] gi|228647973|gb|EEL04022.1| hypothetical protein bcere0014_44020 [Bacillus cereus BDRD-ST196] Length = 484 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 4/60 (6%) Query: 21 ERPSIAIKELIENSL---DAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 E+ + I LI NS+ D E+ ++ + + K ++ DNG G+ ++ +P +R Sbjct: 370 EKINRVISNLIHNSVKYMDKEAKKITVTVLSDNNKVIVKVMDNGSGIEADTLPYIFERFY 429 >gi|300778803|ref|ZP_07088661.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Chryseobacterium gleum ATCC 35910] gi|300504313|gb|EFK35453.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Chryseobacterium gleum ATCC 35910] Length = 644 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + I G + +++DNG G+ + Sbjct: 40 VYEVVDNSIDEALAGYCDTIFVSIKEG--NGIEVSDNGRGIPVD 81 >gi|254511768|ref|ZP_05123835.1| C4-dicarboxylate transport sensor protein [Rhodobacteraceae bacterium KLH11] gi|221535479|gb|EEE38467.1| C4-dicarboxylate transport sensor protein [Rhodobacteraceae bacterium KLH11] Length = 593 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 10/74 (13%) Query: 12 NQIAA--GEIIERPSIAIKELIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTS 65 QI A GE+ R LI N+ DA + ++ + G + D G G+ Sbjct: 474 AQIHAWGGEV--RLVQVFVNLINNAADAMVDQSARKIAISLTEGQPIRVSVRDTGPGI-- 529 Query: 66 EEIPMAVQRHCTSK 79 E+ + T+K Sbjct: 530 EDPDRVFEPFYTTK 543 >gi|217967306|ref|YP_002352812.1| histidine kinase [Dictyoglomus turgidum DSM 6724] gi|217336405|gb|ACK42198.1| histidine kinase [Dictyoglomus turgidum DSM 6724] Length = 178 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 30 LIENSLDAESSRVETVIA---GGGKSFFQITDNGFGMTSEEIP 69 L++NS++A + + + K F +I D+G G+ E + Sbjct: 11 LVQNSIEAGARNIYIEMKKDLENKKLFLKIKDDGKGIPPEVLE 53 >gi|71907910|ref|YP_285497.1| ATP-binding region, ATPase-like [Dechloromonas aromatica RCB] gi|71847531|gb|AAZ47027.1| ATP-binding region, ATPase-like protein [Dechloromonas aromatica RCB] Length = 546 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 9/58 (15%) Query: 27 IKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH------CTS 78 + EL++N+ A + R+E ++ D+G G+ ++ + H TS Sbjct: 31 VSELLQNARRAGAMRIEIHY-DATTQVLRVEDDGRGL--DDFQKLLSFHESGWDAATS 85 >gi|119355929|ref|YP_910573.1| histidine kinase [Chlorobium phaeobacteroides DSM 266] gi|119353278|gb|ABL64149.1| histidine kinase [Chlorobium phaeobacteroides DSM 266] Length = 987 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Query: 18 EIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 + I S AI EL +N+ DA + VE + S I D+G GM+ E Sbjct: 17 QQIADASTAISELFKNAHDAYADNVEVDLFK-SDSLLVIRDDGIGMSPSEFE 67 >gi|331006356|ref|ZP_08329667.1| Topoisomerase IV subunit B [gamma proteobacterium IMCC1989] gi|330419838|gb|EGG94193.1| Topoisomerase IV subunit B [gamma proteobacterium IMCC1989] Length = 628 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 71/187 (37%), Gaps = 29/187 (15%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE---------- 66 RP+ +E+I+NS+D A + +E + ++D+G GM + Sbjct: 29 TRPNHLAQEVIDNSVDEALAGHAKTIEVTLHKN--QAITVSDDGRGMPVDMHPVQKKPGV 86 Query: 67 EIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGE 126 E+ ++ H K SD + G G + + A+S ++S G+ Sbjct: 87 EVILSTL-HAGGKFSDKNYE-FSGGLHGVGVSVVNALSQKLVVSIKRDGKVHDIEFSHGD 144 Query: 127 KISSVRPV----AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 K+ + N GT V + +PA + S + + + V+R A+ P + Sbjct: 145 KVKDLHVTGECGKRNTGTTV------YFLPAP-EYFDSPKFSVSRLRHVLRAKAVLCPGL 197 Query: 183 SFTFSTI 189 F+ Sbjct: 198 KIVFTNE 204 >gi|254448183|ref|ZP_05061646.1| DNA topoisomerase IV, B subunit [gamma proteobacterium HTCC5015] gi|198262309|gb|EDY86591.1| DNA topoisomerase IV, B subunit [gamma proteobacterium HTCC5015] Length = 629 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A + ++E V+ G +++D+G GM + Sbjct: 29 TRPNHLAQEVIDNSVDEAMAGHAKKIEVVLYKDG--SLEVSDDGRGMPVD 76 >gi|15829210|ref|NP_326570.1| DNA gyrase subunit B [Mycoplasma pulmonis UAB CTIP] gi|14090154|emb|CAC13912.1| DNA GYRASE SUBUNIT B [Mycoplasma pulmonis] Length = 644 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S++ + + I D+G G+ + Sbjct: 45 EIVDNSVDETMAGFASQITITLDND--NLITIEDDGRGIPVD 84 >gi|55821497|ref|YP_139939.1| DNA gyrase subunit B [Streptococcus thermophilus LMG 18311] gi|55823426|ref|YP_141867.1| DNA gyrase subunit B [Streptococcus thermophilus CNRZ1066] gi|116628216|ref|YP_820835.1| DNA gyrase subunit B [Streptococcus thermophilus LMD-9] gi|55737482|gb|AAV61124.1| DNA gyrase B subunit [Streptococcus thermophilus LMG 18311] gi|55739411|gb|AAV63052.1| DNA gyrase B subunit [Streptococcus thermophilus CNRZ1066] gi|116101493|gb|ABJ66639.1| DNA gyrase subunit B [Streptococcus thermophilus LMD-9] gi|312278836|gb|ADQ63493.1| DNA gyrase subunit B [Streptococcus thermophilus ND03] Length = 650 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 51 EIVDNSIDEALAGFASHIKVFIEPD--NSITVVDDGRGIPVD 90 >gi|288958109|ref|YP_003448450.1| two-component sensor histidine kinase [Azospirillum sp. B510] gi|288910417|dbj|BAI71906.1| two-component sensor histidine kinase [Azospirillum sp. B510] Length = 651 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 7/61 (11%) Query: 24 SIAIKELIENSLD-A----ESSRVETVIAGGGKSFFQI--TDNGFGMTSEEIPMAVQRHC 76 + + L+ NSL A +S R++ I G + ++ +D+G G+ ++P Sbjct: 540 ARVLTHLVRNSLTHAFRHEQSGRIDIEIHADGDDWIEVVHSDDGQGILESDLPRLFDPFF 599 Query: 77 T 77 T Sbjct: 600 T 600 >gi|167753648|ref|ZP_02425775.1| hypothetical protein ALIPUT_01928 [Alistipes putredinis DSM 17216] gi|167658273|gb|EDS02403.1| hypothetical protein ALIPUT_01928 [Alistipes putredinis DSM 17216] Length = 652 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + ++ I + + DNG G+ ++ Sbjct: 49 VYEVVDNSIDEALAGHCTDIDVTINED--NSITVKDNGRGIPTD 90 >gi|158424137|ref|YP_001525429.1| DNA topoisomerase IV subunit B [Azorhizobium caulinodans ORS 571] gi|158331026|dbj|BAF88511.1| gram negative topoisomerase IV subunit B [Azorhizobium caulinodans ORS 571] Length = 672 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 6/46 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 E+I+NS+D A ++ +E ++ G + DNG G+ EE P Sbjct: 65 EVIDNSMDEAVAGHATFIEVQLSNDG--SLTVIDNGRGIPVEEHPK 108 >gi|77460846|ref|YP_350353.1| histidine kinase [Pseudomonas fluorescens Pf0-1] gi|77384849|gb|ABA76362.1| histidine kinase [Pseudomonas fluorescens Pf0-1] Length = 756 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 9/68 (13%) Query: 5 KLSEKIINQ-IAAGEIIERPSIAIKELIENSLDAESSRVETVIAGG--GKSFFQITDNGF 61 +L ++ Q I++ + AI ELI+NS DA+S +V+ I D+G Sbjct: 15 RLPIQLGRQSISSSMV------AISELIKNSYDADSKKVKLTFTNSKDNLPSLIIEDDGE 68 Query: 62 GMTSEEIP 69 GM+ E++ Sbjct: 69 GMSYEDVK 76 >gi|23097461|ref|NP_690927.1| DNA gyrase subunit B [Oceanobacillus iheyensis HTE831] gi|22775684|dbj|BAC11962.1| DNA gyrase subunit B [Oceanobacillus iheyensis HTE831] Length = 641 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ V+ + + DNG G+ + Sbjct: 49 EIVDNSIDEALAGYCDHIQVVVEED--NSITVKDNGRGIPVD 88 >gi|326798147|ref|YP_004315966.1| histidine kinase [Sphingobacterium sp. 21] gi|326548911|gb|ADZ77296.1| histidine kinase [Sphingobacterium sp. 21] Length = 675 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Query: 26 AIKELIENSL-DAESSRVETV-IAGGGKSFFQITDNGFGMTSEE 67 ++ELI N++ A ++ + I GK F + D+G G +++ Sbjct: 583 ILQELINNAVRHAGANTILVQCIQNDGKVFITVEDDGCGFDTDD 626 >gi|260789898|ref|XP_002589981.1| hypothetical protein BRAFLDRAFT_281429 [Branchiostoma floridae] gi|229275168|gb|EEN45992.1| hypothetical protein BRAFLDRAFT_281429 [Branchiostoma floridae] Length = 569 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 8/69 (11%) Query: 29 ELIENSLDAESSRVET------VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 EL++N+ DA ++++ + GG D+G GM E +Q +SK + Sbjct: 33 ELVDNARDAAATKIHVYTVPKKEVRGG--YLLCFLDDGEGMDPGEAASVIQFGKSSKRAV 90 Query: 83 DFSNIHTFG 91 D I +G Sbjct: 91 DSQMIGQYG 99 >gi|260802163|ref|XP_002595962.1| hypothetical protein BRAFLDRAFT_60968 [Branchiostoma floridae] gi|229281215|gb|EEN51974.1| hypothetical protein BRAFLDRAFT_60968 [Branchiostoma floridae] Length = 769 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 8/69 (11%) Query: 29 ELIENSLDAESSRVET------VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 EL++N+ DA ++++ + GG D+G GM E +Q +SK + Sbjct: 33 ELVDNARDAAATKIHVYTVPKKEVRGG--YLLCFLDDGEGMDPGEAASVIQFGKSSKRAV 90 Query: 83 DFSNIHTFG 91 D I +G Sbjct: 91 DSQMIGQYG 99 >gi|307154719|ref|YP_003890103.1| DNA gyrase subunit B [Cyanothece sp. PCC 7822] gi|306984947|gb|ADN16828.1| DNA gyrase, B subunit [Cyanothece sp. PCC 7822] Length = 640 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 39 VYEVVDNSIDEALAGYCTHIEVDINPDG--SVTVTDDGRGIPTD 80 >gi|153873771|ref|ZP_02002242.1| Gram negative topoisomerase IV, subunit B [Beggiatoa sp. PS] gi|152069763|gb|EDN67758.1| Gram negative topoisomerase IV, subunit B [Beggiatoa sp. PS] Length = 632 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+++NS+D A +++++ V+ G + DNG GM + Sbjct: 37 TRPNHLAQEVVDNSVDEAIAGYANQIDVVLHADG--SLSVRDNGRGMPVD 84 >gi|154251632|ref|YP_001412456.1| hypothetical protein Plav_1178 [Parvibaculum lavamentivorans DS-1] gi|154253988|ref|YP_001414812.1| hypothetical protein Plav_3557 [Parvibaculum lavamentivorans DS-1] gi|154155582|gb|ABS62799.1| conserved hypothetical protein [Parvibaculum lavamentivorans DS-1] gi|154157938|gb|ABS65155.1| conserved hypothetical protein [Parvibaculum lavamentivorans DS-1] Length = 629 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 5/46 (10%) Query: 29 ELIENSLDAESSRVETVIAGGGKS-----FFQITDNGFGMTSEEIP 69 E + N+LDA ++ V I ++DNG G T E Sbjct: 24 EALANALDAGATDVSIDIDVQAFDKPDTLKITVSDNGDGFTDENFE 69 >gi|167037867|ref|YP_001665445.1| histidine kinase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116284|ref|YP_004186443.1| ATP-binding region ATPase domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856701|gb|ABY95109.1| histidine kinase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929375|gb|ADV80060.1| ATP-binding region ATPase domain protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 181 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 3/51 (5%) Query: 30 LIENSLDAESSRVETVIA-GGGKSFFQI--TDNGFGMTSEEIPMAVQRHCT 77 L +NS+ A + + I K ++ D+G GM+ E + T Sbjct: 11 LSQNSIRAGAKNIYIEINIDTSKDMLKVSIEDDGCGMSKELLKKVTDPFIT 61 >gi|254227899|ref|ZP_04921329.1| conserved hypothetical protein [Vibrio sp. Ex25] gi|262396114|ref|YP_003287967.1| signal transduction histidine kinase [Vibrio sp. Ex25] gi|151939395|gb|EDN58223.1| conserved hypothetical protein [Vibrio sp. Ex25] gi|262339708|gb|ACY53502.1| signal transduction histidine kinase [Vibrio sp. Ex25] Length = 690 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 9/86 (10%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDA----ESSRVETVIAGGGKSF-FQITDN 59 ++ + N I GE +R + LI N+LDA ++ ++ + + ++DN Sbjct: 567 RIPNDLPNII--GEE-QRLQQVLGNLISNALDAMKETQAPQLMIAVTPTTDNVEVVVSDN 623 Query: 60 GFGMTSEEIPMAVQRHCTS-KISDDF 84 G G+ S+++ + TS KI + Sbjct: 624 GCGVPSDQLDTMFEPFQTSKKIGEGL 649 >gi|298290105|ref|YP_003692044.1| PAS/PAC sensor signal transduction histidine kinase [Starkeya novella DSM 506] gi|296926616|gb|ADH87425.1| PAS/PAC sensor signal transduction histidine kinase [Starkeya novella DSM 506] Length = 383 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 8/69 (11%) Query: 19 IIERPSIA---IKELIENSLDAESS----RVETVIAGG-GKSFFQITDNGFGMTSEEIPM 70 + P + L+ N+++A + + G ++ DNG G+ E + Sbjct: 266 VSVDPVQVQQIVVNLVRNAIEAAAGMTDPAIHIRTRSADGTVVLEVQDNGPGIAPEALSK 325 Query: 71 AVQRHCTSK 79 + +SK Sbjct: 326 LFEAFASSK 334 >gi|291529243|emb|CBK94829.1| DNA topoisomerase IV subunit B [Eubacterium rectale M104/1] Length = 640 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AES-SRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + + G + DNG G+ Sbjct: 43 EIVDNSVDEHLAGACDTIRVTLEKNG--SCTVEDNGRGIP 80 >gi|291525298|emb|CBK90885.1| DNA topoisomerase IV subunit B [Eubacterium rectale DSM 17629] Length = 640 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AES-SRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + + G + DNG G+ Sbjct: 43 EIVDNSVDEHLAGACDTIRVTLEKNG--SCTVEDNGRGIP 80 >gi|238924637|ref|YP_002938153.1| DNA topoisomerase (ATP-hydrolyzing) [Eubacterium rectale ATCC 33656] gi|238876312|gb|ACR76019.1| DNA topoisomerase (ATP-hydrolyzing) [Eubacterium rectale ATCC 33656] Length = 640 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AES-SRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + + G + DNG G+ Sbjct: 43 EIVDNSVDEHLAGACDTIRVTLEKNG--SCTVEDNGRGIP 80 >gi|148656775|ref|YP_001276980.1| multi-sensor hybrid histidine kinase [Roseiflexus sp. RS-1] gi|148568885|gb|ABQ91030.1| multi-sensor hybrid histidine kinase [Roseiflexus sp. RS-1] Length = 759 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 31/253 (12%), Positives = 74/253 (29%), Gaps = 37/253 (14%) Query: 15 AAGEII--ERPSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMA 71 +GE++ + L+ ++ + + + G + ++DNG GM + + Sbjct: 509 RSGEVVISTDVRSVDRALL-------ATAIGSDGLEEGAYAVLTVSDNGCGMDAATLERI 561 Query: 72 VQRHCTSK-ISDDFSNIHTF----GFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGE 126 T+K I T G RG +I + S P + T Sbjct: 562 FDPFFTTKFIGRGLGLPATLGIVRGHRG----AI------RVTSTPGEGTTVTIFLPEVH 611 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--- 183 +S M + VR I ++ +S + + + + A+ Sbjct: 612 SLSPQVETFMPSSRMSIVRTNCSRIFLVVDDEESTRAVAARMLEWMGHPALTTGDAETAV 671 Query: 184 -FTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVEL--------NEKSNEITLQ 234 + + ++ N + ++ + + + + + L Sbjct: 672 ILARQHREHLACVLLDLPSDHNLDRTVGELRQVCTDMPVILMSGYPEEIASRRFAHLGLS 731 Query: 235 GYTGIPTFNRGNA 247 G+ P + Sbjct: 732 GFLQKPFTSYELR 744 >gi|27262246|gb|AAN87404.1| DNA gyrase subunit B [Heliobacillus mobilis] Length = 641 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E +I + +++DNG G+ + Sbjct: 49 VYEIVDNSIDEALAGYCDTIEVIIHED--NSIEVSDNGRGIPVD 90 >gi|322835710|ref|YP_004215736.1| signal transduction histidine kinase regulating citrate/malate metabolism [Rahnella sp. Y9602] gi|321170911|gb|ADW76609.1| signal transduction histidine kinase regulating citrate/malate metabolism [Rahnella sp. Y9602] Length = 539 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 7/56 (12%) Query: 30 LIENSLDA------ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LIEN+LDA V G + ++D+G G+ E I ++ +SK Sbjct: 438 LIENALDALGDQPDGEVSVLLHYQNGSLACI-VSDDGPGIQPENIDAIFEKGVSSK 492 >gi|319440154|ref|ZP_07989310.1| DNA gyrase subunit B [Corynebacterium variabile DSM 44702] Length = 686 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + VE + G Q++DNG G+ E Sbjct: 55 EVVDNSVDEAMAGFADHVEVTLKDDG--SVQVSDNGRGIPVE 94 >gi|288937411|ref|YP_003441470.1| histidine kinase [Klebsiella variicola At-22] gi|288892120|gb|ADC60438.1| histidine kinase [Klebsiella variicola At-22] Length = 763 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 26 AIKELIENSLDAESSRVETVIAG----GGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 A+ ELI+NS DA+S VE ++ S I D G GM+ ++ R TS Sbjct: 31 ALSELIKNSYDADSPFVEIILENIKDISSDSKIIIRDEGEGMSWDDFKNNWMRISTS 87 >gi|114569878|ref|YP_756558.1| DNA topoisomerase IV subunit B [Maricaulis maris MCS10] gi|114340340|gb|ABI65620.1| DNA topoisomerase IV subunit B [Maricaulis maris MCS10] Length = 672 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + R+E + S+ +TDNG G+ + Sbjct: 63 EILDNSMDEAVAGWADRIEVAVDED--SYITVTDNGRGIPVD 102 >gi|106734151|gb|ABF82552.1| DNA topoisomerase IV subunit beta [uncultured bacterium] Length = 47 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG G+ + Sbjct: 5 EIVDNSIDEALAGYCDTIKVTIEPG--NSILVEDNGQGIPVD 44 >gi|71725275|ref|YP_272294.1| hypothetical protein PSPPH_B0039 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71558865|gb|AAZ38074.1| hypothetical protein PSPPH_B0039 [Pseudomonas syringae pv. phaseolicola 1448A] Length = 796 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 13/77 (16%) Query: 6 LSEKIINQI---AAGEIIERPSIAIKELIENSLDAESSRVE-TVIAGGGKSFFQITDNGF 61 L +II I AG AI EL+ NS+DA+++ + + G F TD+G Sbjct: 7 LDPEIIQHIIHSQAG----SIGKAIIELVMNSVDADATALRLIMTKEG----FHCTDDGC 58 Query: 62 GM-TSEEIPMAVQRHCT 77 G + E++ R T Sbjct: 59 GFASREDVLRYFGRFGT 75 >gi|282880626|ref|ZP_06289332.1| DNA gyrase, B subunit [Prevotella timonensis CRIS 5C-B1] gi|281305521|gb|EFA97575.1| DNA gyrase, B subunit [Prevotella timonensis CRIS 5C-B1] Length = 657 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 E ++NS+D A + +E I + DNG G+ ++ Sbjct: 47 ETVDNSIDEAMAGYCTDIEVTINED--ESITVQDNGRGIPVDQHEKL 91 >gi|138895847|ref|YP_001126300.1| two-component sensor histidine kinase [Geobacillus thermodenitrificans NG80-2] gi|196248739|ref|ZP_03147439.1| multi-sensor signal transduction histidine kinase [Geobacillus sp. G11MC16] gi|134267360|gb|ABO67555.1| Two-component sensor histidine kinase [Geobacillus thermodenitrificans NG80-2] gi|196211615|gb|EDY06374.1| multi-sensor signal transduction histidine kinase [Geobacillus sp. G11MC16] Length = 598 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 21 ERPSIAIKELIENSL---DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 +R + LI+N++ +A + V +I G + D+G G+ E++P +R Sbjct: 485 DRIEQVLTNLIDNAIRHTEAGGT-VRLIIERSGDGVTIHVQDSGSGIPEEDLPFVFERFY 543 >gi|154173892|ref|YP_001407307.1| DNA gyrase subunit B [Campylobacter curvus 525.92] gi|112803527|gb|EAU00871.1| DNA gyrase, B subunit [Campylobacter curvus 525.92] Length = 770 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 16/130 (12%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP---------MAVQRH 75 E+++NS+D A ++ I G +TDNG G+ + P + H Sbjct: 42 EVVDNSIDEAMAGYCDTIDIEITNEG--SCIVTDNGRGIPVDMHPTEHLPAATVVLTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D + + G G + + A+S +++ N Q G ++++ + Sbjct: 100 AGGKFDKDTYKV-SGGLHGVGVSVVNALSKKLILTIKRDGNVYRQEFQKGIPVTALETIK 158 Query: 136 MNPGTIVEVR 145 T +V Sbjct: 159 TTNRTGTQVE 168 >gi|323139267|ref|ZP_08074321.1| DNA topoisomerase VI, B subunit [Methylocystis sp. ATCC 49242] gi|322395488|gb|EFX98035.1| DNA topoisomerase VI, B subunit [Methylocystis sp. ATCC 49242] Length = 543 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 16/130 (12%) Query: 23 PSIAIKELIENSLDA--ESS---RVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQR-H 75 A+KE ++N+LDA E+ + + KS + DNG G+ +I + Sbjct: 30 LVTAVKEAVDNALDACEEAGVLPDITVEVRGRFEKSRIVVEDNGPGIVESQIARIFGKLL 89 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLT------LMSRPPQNNTGAQIAISGEKIS 129 SK + G +G + + G LT ++SR + +++ +S + + Sbjct: 90 YGSKFH---KLAQSRGQQGMGISAAGMYGQLTVGKPLHVISRTEGDALASELYVSIDTAN 146 Query: 130 SVRPVAMNPG 139 + + Sbjct: 147 NRPDIHRKKR 156 >gi|227536008|ref|ZP_03966057.1| two-component sensor histidine kinase, phosphate regulation [Sphingobacterium spiritivorum ATCC 33300] gi|227244121|gb|EEI94136.1| two-component sensor histidine kinase, phosphate regulation [Sphingobacterium spiritivorum ATCC 33300] Length = 343 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 46/128 (35%), Gaps = 54/128 (42%) Query: 3 IRKLSEKIINQIAAGEI---IE--RPSIAIKELIENSLD--AESSRVETVIAG------- 48 I L E I+++ +G I IE S IKE IEN LD A+S +++ V Sbjct: 171 IHDLDE--ISKLESGRISLNIEKFDLSELIKETIEN-LDDKAKSQKIDIVFKQKYQNVTF 227 Query: 49 -------------------------GGKSFFQ-----------ITDNGFGMTSEEIPMAV 72 GG + + +TD+G G+ + +P Sbjct: 228 VKADRKKIQQVLTNLIDNSIKYGKTGGSTDIRIFPLFEQVLVEVTDDGQGIEEKNLPRVF 287 Query: 73 QRHC-TSK 79 +R T K Sbjct: 288 ERFYRTDK 295 >gi|281421058|ref|ZP_06252057.1| DNA gyrase, B subunit [Prevotella copri DSM 18205] gi|281404976|gb|EFB35656.1| DNA gyrase, B subunit [Prevotella copri DSM 18205] Length = 656 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E ++NS+D A + +E I + + DNG G+ + Sbjct: 45 VNETVDNSIDEAMAGYCTDIEVTINED--NSITVEDNGRGIPVD 86 >gi|254784277|ref|YP_003071705.1| DNA gyrase subunit B [Teredinibacter turnerae T7901] gi|237686033|gb|ACR13297.1| DNA gyrase, B subunit [Teredinibacter turnerae T7901] Length = 808 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 72/252 (28%), Gaps = 36/252 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE---------EIPMAVQRH 75 EL++NS+D A S + VI ++DNG G+ +E E+ M V H Sbjct: 45 ELVDNSIDEALAGHCSEILAVIHPD--ESISVSDNGRGIPTEMHEEGVSAAEVIMTVL-H 101 Query: 76 CTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS 129 K D+ + + G G AL S L L R + Sbjct: 102 AGGKFDDNTYKV-SGGLHGVGVSVVNALSS-----KLKLTIRRGGKV--WEQVYKHGVPQ 153 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 + V + + + + +R ++ V Sbjct: 154 APLSVIGETELTGTEVHFW----PSAETFNNIEFHFEHLAKRLRELSFLNSGVRIRLLDE 209 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ 249 +S + ++ G + + N V E G +N G Sbjct: 210 RSGKEEV--YEYEGGLKAFVEFLNQNKNPINKVMHFTAQREDDGVGVEVALQWNDGFQEN 267 Query: 250 FYVFINGRTVQD 261 Y + N +D Sbjct: 268 IYCYTNNIPQRD 279 >gi|167033013|ref|YP_001668244.1| integral membrane sensor signal transduction histidine kinase [Pseudomonas putida GB-1] gi|166859501|gb|ABY97908.1| integral membrane sensor signal transduction histidine kinase [Pseudomonas putida GB-1] Length = 428 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Query: 21 ERPSI---AIKELIENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 RP + L++N+L A ++ +E GG + ++ DNG G+ S E+ ++ Sbjct: 322 TRPHALRRVLVNLVDNALKFAGAAELEV-CREGGMTVIRVLDNGPGIPSGELDEVLKPFY 380 >gi|86151812|ref|ZP_01070026.1| hypothetical protein CJJ26094_0463 [Campylobacter jejuni subsp. jejuni 260.94] gi|85841441|gb|EAQ58689.1| hypothetical protein CJJ26094_0463 [Campylobacter jejuni subsp. jejuni 260.94] Length = 633 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 8/60 (13%) Query: 10 IINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAG------GGKS-FFQITDNGFG 62 + I + I R + I E I+N++DA+++R++ GK I DNG G Sbjct: 9 TVKTIKSDSTIMRLNP-ISEAIKNAIDAKATRIDICFEECEGNSLFGKGISISIKDNGAG 67 >gi|322378945|ref|ZP_08053359.1| DNA gyrase subunit B [Helicobacter suis HS1] gi|321148621|gb|EFX43107.1| DNA gyrase subunit B [Helicobacter suis HS1] Length = 767 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 6/51 (11%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 I + E+++NS+D A + ++ ++ G + DNG G+ + Sbjct: 31 INGLHHMVYEVVDNSIDESMAGFCTDIKITLSQYG--SCIVEDNGRGIPVD 79 >gi|224372073|ref|YP_002606445.1| DNA gyrase subunit B [Nautilia profundicola AmH] gi|223589802|gb|ACM93538.1| DNA gyrase, B subunit [Nautilia profundicola AmH] Length = 758 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 81/213 (38%), Gaps = 23/213 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGM-----TSEEIPMA----VQRH 75 E+++NS+D A ++ ++ I G + +I+DNG G+ E+IP A H Sbjct: 40 EVVDNSIDEAMAGYANEIKVKINKDGSA--EISDNGRGIPVDIHPEEKIPAATVVLTVLH 97 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K + + + G G + + A++ +M+ Q G+ ++ + + Sbjct: 98 AGGKFDNKTYKV-SGGLHGVGVSVVNALAKKLIMTIKRDGKIWRQEFERGKPVTDLEVIG 156 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T + + ++ ++ ++ ++ +A P ++ F + Sbjct: 157 TTNRTGTTI-QFW----PDEEIFETTTFKSEILQKRLKELAYLNPNITIKFENENDGVKE 211 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKS 228 + G + + + ++ I++ + + Sbjct: 212 VYHY--EGGIKDFVKTLTNKECISDVIYFTDHY 242 >gi|188580471|ref|YP_001923916.1| histidine kinase [Methylobacterium populi BJ001] gi|179343969|gb|ACB79381.1| histidine kinase [Methylobacterium populi BJ001] Length = 621 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 10/74 (13%) Query: 15 AAGEIIE---RPSIAIKELIENSLDA-----ESSRVETVIAGG-GKSFFQITDNGFGMTS 65 AA ++ R S + L+ N+LDA + V G G+ + DNG G+ Sbjct: 486 AAQWVVFEPIRLSQVLVNLVGNALDAVKGRPGA-EVAVRAWAGEGRVVLSVEDNGPGLDR 544 Query: 66 EEIPMAVQRHCTSK 79 + + T+K Sbjct: 545 AALARLFEPFFTTK 558 >gi|269115287|ref|YP_003303050.1| Topoisomerase IV subunit B [Mycoplasma hominis] gi|21903715|gb|AAC33841.2| topoisomerase IV subunit [Mycoplasma hominis ATCC 23114] gi|268322912|emb|CAX37647.1| Topoisomerase IV subunit B [Mycoplasma hominis ATCC 23114] Length = 639 Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 82/247 (33%), Gaps = 37/247 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT-------SEEIPMAV-QRHC 76 E+ +N++D + ++++ + S + DNG G+ + + + H Sbjct: 42 EIFDNAIDEALSGFANKIIVTLKKD--SSVIVEDNGRGIPVNKHESGKSGVELVFTELHA 99 Query: 77 TSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMS-RPPQNNTGAQIAISGEKIS 129 K D + G G AL S + + R + A + + + Sbjct: 100 GGKFGDGAYK-TSGGLHGVGSSVVNALSS-----KVEVTVWRDKKAYFTAFQQDTIIEKT 153 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 GT V+ A + K + +I + +R + P ++ F Sbjct: 154 HEISPTTKQGTKVQFW-------ADFSIFKKSKYSPEIIKEKLREASFLMPNLTIEFY-N 205 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ 249 ++ + F++ +G E I+ V + + ++ + + G + Sbjct: 206 ENTDEHVTFKTKDG-IKEYINFVGEGKKFISEIFYASGMCNYGIEIDLAL-VYTDGYSES 263 Query: 250 FYVFING 256 Y F+N Sbjct: 264 IYSFVNN 270 >gi|327405005|ref|YP_004345843.1| ATP-binding region ATPase domain-containing protein [Fluviicola taffensis DSM 16823] gi|327320513|gb|AEA45005.1| ATP-binding region ATPase domain protein [Fluviicola taffensis DSM 16823] Length = 812 Score = 46.6 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%) Query: 26 AIKELIENSLDAESSRVETVIAGGG----KSFFQITDNGFGMTSE 66 A+ EL++NS DA++ + G + DNG GMTSE Sbjct: 27 AVVELVKNSYDADAKNCIIIFENHGDFSKTPCIYLIDNGTGMTSE 71 >gi|326201389|ref|ZP_08191261.1| ATP-binding region ATPase domain protein [Clostridium papyrosolvens DSM 2782] gi|325988957|gb|EGD49781.1| ATP-binding region ATPase domain protein [Clostridium papyrosolvens DSM 2782] Length = 188 Score = 46.6 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Query: 31 IENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCTS 78 ++NS+ A++++++ I+ + I+DNG GM S+ + A TS Sbjct: 12 VQNSITAQATKIKIHISIDSQKVYLLLNISDNGAGMDSDILLKAQDPFFTS 62 >gi|83646507|ref|YP_434942.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV) subunit B [Hahella chejuensis KCTC 2396] gi|83634550|gb|ABC30517.1| Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Hahella chejuensis KCTC 2396] Length = 325 Score = 46.6 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 21/115 (18%) Query: 26 AIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT---SEEIPMAVQR---H 75 I EL+ N +D A ++ ++ ++ + D+G G + V+R H Sbjct: 27 VIYELVANVVDLFLAGRATTLKVDVSE---CEIIVIDDGPGFPFPVEDSAHNLVERYLTH 83 Query: 76 CTSKISDD--FSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEK 127 K + D +IH G G L ++ AVS LT+ S +N + K Sbjct: 84 HHDKPTADDHAPHIHVLGG-GLGLAAVNAVSEKLTIES----SNGAWRWRQVFGK 133 >gi|40019245|emb|CAE92286.1| DNA gyrase subunit B [Streptococcus mitis] Length = 83 Score = 46.6 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ I + + D+G G+ + Sbjct: 13 EIVDNSIDEALAGFASHIQVFIEPD--NSITVVDDGRGIPVD 52 >gi|145221416|ref|YP_001132094.1| DNA gyrase subunit B [Mycobacterium gilvum PYR-GCK] gi|145213902|gb|ABP43306.1| DNA gyrase subunit B [Mycobacterium gilvum PYR-GCK] Length = 675 Score = 46.6 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 58/179 (32%), Gaps = 37/179 (20%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE---------EIPMAVQR 74 E+++N++D A +++V+ I GG Q+TD+G G+ ++ M V Sbjct: 48 EVVDNAVDEAMAGFATKVDVRILEDGG---VQVTDDGRGIPVAMHSTGIPTIDVVMTVL- 103 Query: 75 HCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKI 128 H K + + + G G AL S L R + S Sbjct: 104 HAGGKFEEGAYQV-SGGLHGVGVSVVNALSS-----RLEADVRKDGHEWFQTYDRSVPGT 157 Query: 129 SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFS 187 GT + A ++ + I ++ MA ++ + Sbjct: 158 LRKGDPTDKTGTTIRFW-------ADPEIFETTNYDFETIARRLQEMAFLNKGLTIELT 209 >gi|330897345|gb|EGH28764.1| GAF:ATP-binding region, ATPase-like:histidine kinase A [Pseudomonas syringae pv. japonica str. M301072PT] Length = 223 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 7/64 (10%) Query: 21 ERPSIAIKELIENSLDAESS----RVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 ER + L+ N++ + + +++ I+ G + F + D+G G+ E++P +R+ Sbjct: 117 ERLFQVLSNLVGNAI--KFTPKLGKIDVSAISNGTEIVFTVRDSGEGIPPEQLPHIFERY 174 Query: 76 CTSK 79 T K Sbjct: 175 WTVK 178 >gi|301056283|ref|YP_003794494.1| sensor histidine kinase [Bacillus anthracis CI] gi|300378452|gb|ADK07356.1| sensor histidine kinase [Bacillus cereus biovar anthracis str. CI] Length = 406 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ E+IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKEKIPKLNEAFYTTK 365 >gi|228917434|ref|ZP_04080984.1| Sensor histidine kinase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228842206|gb|EEM87304.1| Sensor histidine kinase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 395 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ E+IP + T+K Sbjct: 303 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKEKIPKLNEAFYTTK 354 >gi|228929830|ref|ZP_04092845.1| Sensor histidine kinase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228829746|gb|EEM75368.1| Sensor histidine kinase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 395 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ E+IP + T+K Sbjct: 303 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKEKIPKLNEAFYTTK 354 >gi|228936090|ref|ZP_04098896.1| Sensor histidine kinase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228823545|gb|EEM69371.1| Sensor histidine kinase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 395 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ E+IP + T+K Sbjct: 303 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKEKIPKLNEAFYTTK 354 >gi|228948526|ref|ZP_04110806.1| Sensor histidine kinase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229124344|ref|ZP_04253533.1| Sensor histidine kinase [Bacillus cereus 95/8201] gi|228659097|gb|EEL14748.1| Sensor histidine kinase [Bacillus cereus 95/8201] gi|228811125|gb|EEM57466.1| Sensor histidine kinase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 395 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ E+IP + T+K Sbjct: 303 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKEKIPKLNEAFYTTK 354 >gi|256823911|ref|YP_003147871.1| DNA gyrase subunit B [Kytococcus sedentarius DSM 20547] gi|256687304|gb|ACV05106.1| DNA gyrase subunit B [Kytococcus sedentarius DSM 20547] Length = 701 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 30/306 (9%), Positives = 83/306 (27%), Gaps = 42/306 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EIPMAVQR-H 75 E+++N++D A + R+E I + ++ DNG G+ ++ + + + + H Sbjct: 51 EIVDNAVDEHLAGHADRIEVTILPD--NAIRVVDNGRGIPTDVHAKEGISGVELVLTQLH 108 Query: 76 CTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQN---NTGAQIAISGE 126 K D + + G G AL S + R + + Sbjct: 109 AGGKFGGDSYAV-SGGLHGVGSSVVNALSS-----RFEVEVRQKGHVFRQSFTVGVPDAP 162 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 GT + + ++ + ++ ++ Sbjct: 163 LSKDEEIAEDVTGTTITYW-------PSAEIFDTTVIDFETLRARFQQTCFLNKGLTIQL 215 Query: 187 STIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPT-FNRG 245 + + R + I++ + E +E + + P Sbjct: 216 T-DERPRVTDADDEGLDDVDTDIAEGLEEHEDGTPIEDGQPDADQPATAAATKPRTVTYR 274 Query: 246 NANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDP-RQVDVNVHPAKS 304 + ++ R + + + ++ + + +VH + Sbjct: 275 YDDGLLDYV--RHLNNSKKTQPVNDEIIAFETEDSERMLQCEVAMQWTSSYSESVHTYAN 332 Query: 305 YIRFRN 310 + Sbjct: 333 SVNTHE 338 >gi|170742880|ref|YP_001771535.1| histidine kinase [Methylobacterium sp. 4-46] gi|168197154|gb|ACA19101.1| histidine kinase [Methylobacterium sp. 4-46] Length = 624 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAESSR----VETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHC 76 R + LI+N+LDA + R V A G ++ +++DNG G+ E Sbjct: 515 RLEQVVVNLIQNALDAVAGRPDPRVSVRCAASGPRAVLEVSDNGPGLPEGEAGRVFDPFF 574 Query: 77 TSK 79 T+K Sbjct: 575 TTK 577 >gi|190568313|ref|ZP_03021221.1| putative sensor histidine kinase [Bacillus anthracis Tsiankovskii-I] gi|190560569|gb|EDV14546.1| putative sensor histidine kinase [Bacillus anthracis Tsiankovskii-I] Length = 406 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ E+IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKEKIPKLNEAFYTTK 365 >gi|196041507|ref|ZP_03108800.1| putative sensor histidine kinase [Bacillus cereus NVH0597-99] gi|196027755|gb|EDX66369.1| putative sensor histidine kinase [Bacillus cereus NVH0597-99] Length = 406 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ E+IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKEKIPKLNEAFYTTK 365 >gi|218906006|ref|YP_002453840.1| putative sensor histidine kinase [Bacillus cereus AH820] gi|218538791|gb|ACK91189.1| putative sensor histidine kinase [Bacillus cereus AH820] Length = 406 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ E+IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKEKIPKLNEAFYTTK 365 >gi|118479903|ref|YP_897054.1| sensor histidine kinase [Bacillus thuringiensis str. Al Hakam] gi|196043923|ref|ZP_03111160.1| putative sensor histidine kinase [Bacillus cereus 03BB108] gi|225866769|ref|YP_002752147.1| putative sensor histidine kinase [Bacillus cereus 03BB102] gi|118419128|gb|ABK87547.1| sensor histidine kinase [Bacillus thuringiensis str. Al Hakam] gi|196025259|gb|EDX63929.1| putative sensor histidine kinase [Bacillus cereus 03BB108] gi|225787393|gb|ACO27610.1| putative sensor histidine kinase [Bacillus cereus 03BB102] Length = 406 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ E+IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKEKIPKLNEAFYTTK 365 >gi|49478756|ref|YP_038821.1| sensor histidine kinase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49330312|gb|AAT60958.1| sensor histidine kinase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 406 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ E+IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKEKIPKLNEAFYTTK 365 >gi|52140726|ref|YP_086103.1| sensor histidine kinase [Bacillus cereus E33L] gi|51974195|gb|AAU15745.1| sensor histidine kinase [Bacillus cereus E33L] Length = 406 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ E+IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKEKIPKLNEAFYTTK 365 >gi|38234502|ref|NP_940269.1| putative two somponent system sensor kinase protein [Corynebacterium diphtheriae NCTC 13129] gi|38200765|emb|CAE50469.1| Putative two somponent system sensor kinase protein [Corynebacterium diphtheriae] Length = 519 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 15/89 (16%) Query: 19 IIE----RPSIAIKELIENSL----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIP 69 ++E R + L+ N+L D S+RV +A G +F ++ D+G G++ E+ Sbjct: 397 VVEGDAARLHQVLTNLVANALKHGGD--SARVTIKLADAGSNFAVKVIDDGIGLSEEDAS 454 Query: 70 MAVQRHCTSKISDDFSNIHTFGFRGEALP 98 +R D S + G G L Sbjct: 455 HIFERFY----RADSSRARSTGGSGLGLA 479 >gi|30264844|ref|NP_847221.1| sensor histidine kinase, putative [Bacillus anthracis str. Ames] gi|47530327|ref|YP_021676.1| sensor histidine kinase [Bacillus anthracis str. 'Ames Ancestor'] gi|49187659|ref|YP_030912.1| sensor histidine kinase [Bacillus anthracis str. Sterne] gi|65322143|ref|ZP_00395102.1| COG0642: Signal transduction histidine kinase [Bacillus anthracis str. A2012] gi|165869815|ref|ZP_02214473.1| putative sensor histidine kinase [Bacillus anthracis str. A0488] gi|167633866|ref|ZP_02392189.1| putative sensor histidine kinase [Bacillus anthracis str. A0442] gi|167638020|ref|ZP_02396298.1| putative sensor histidine kinase [Bacillus anthracis str. A0193] gi|170685775|ref|ZP_02876998.1| putative sensor histidine kinase [Bacillus anthracis str. A0465] gi|170705538|ref|ZP_02896002.1| putative sensor histidine kinase [Bacillus anthracis str. A0389] gi|177651281|ref|ZP_02934112.1| putative sensor histidine kinase [Bacillus anthracis str. A0174] gi|227817570|ref|YP_002817579.1| putative sensor histidine kinase [Bacillus anthracis str. CDC 684] gi|229603222|ref|YP_002869051.1| putative sensor histidine kinase [Bacillus anthracis str. A0248] gi|254687583|ref|ZP_05151439.1| putative sensor histidine kinase [Bacillus anthracis str. CNEVA-9066] gi|254725148|ref|ZP_05186931.1| putative sensor histidine kinase [Bacillus anthracis str. A1055] gi|254736886|ref|ZP_05194592.1| putative sensor histidine kinase [Bacillus anthracis str. Western North America USA6153] gi|254741921|ref|ZP_05199608.1| putative sensor histidine kinase [Bacillus anthracis str. Kruger B] gi|254754481|ref|ZP_05206516.1| putative sensor histidine kinase [Bacillus anthracis str. Vollum] gi|254757314|ref|ZP_05209341.1| putative sensor histidine kinase [Bacillus anthracis str. Australia 94] gi|30259519|gb|AAP28707.1| putative sensor histidine kinase [Bacillus anthracis str. Ames] gi|47505475|gb|AAT34151.1| putative sensor histidine kinase [Bacillus anthracis str. 'Ames Ancestor'] gi|49181586|gb|AAT56962.1| sensor histidine kinase, putative [Bacillus anthracis str. Sterne] gi|164714644|gb|EDR20163.1| putative sensor histidine kinase [Bacillus anthracis str. A0488] gi|167513837|gb|EDR89205.1| putative sensor histidine kinase [Bacillus anthracis str. A0193] gi|167530667|gb|EDR93369.1| putative sensor histidine kinase [Bacillus anthracis str. A0442] gi|170129663|gb|EDS98526.1| putative sensor histidine kinase [Bacillus anthracis str. A0389] gi|170670239|gb|EDT20979.1| putative sensor histidine kinase [Bacillus anthracis str. A0465] gi|172083107|gb|EDT68169.1| putative sensor histidine kinase [Bacillus anthracis str. A0174] gi|227007134|gb|ACP16877.1| putative sensor histidine kinase [Bacillus anthracis str. CDC 684] gi|229267630|gb|ACQ49267.1| putative sensor histidine kinase [Bacillus anthracis str. A0248] Length = 406 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ E+IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKEKIPKLNEAFYTTK 365 >gi|251777853|ref|ZP_04820773.1| two-component sensor histidine kinase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082168|gb|EES48058.1| two-component sensor histidine kinase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 471 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 25 IAIKELIENSLD-AESSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHCT 77 I L++N++ +E + ++ + + I DNG G+ E++ + T Sbjct: 367 QVILNLLDNAIKYSECTEIDIYMENNEDYAIIYIADNGQGIPKEDLKNVFENFYT 421 >gi|16330312|ref|NP_441040.1| DNA gyrase B subunit [Synechocystis sp. PCC 6803] gi|2501296|sp|P77966|GYRB_SYNY3 RecName: Full=DNA gyrase subunit B; Contains: RecName: Full=Ssp gyrB intein gi|1652801|dbj|BAA17720.1| DNA gyrase B subunit [Synechocystis sp. PCC 6803] Length = 1078 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A + +E I G + DNG G+ ++ Sbjct: 42 VYEVVDNAIDEALAGYCTHIEIDINADG--SVTVVDNGRGIPTD 83 >gi|307566039|ref|ZP_07628497.1| DNA gyrase, B subunit [Prevotella amnii CRIS 21A-A] gi|307345227|gb|EFN90606.1| DNA gyrase, B subunit [Prevotella amnii CRIS 21A-A] Length = 656 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 E ++NS+D A + +E I + + DNG G+ +E Sbjct: 47 ETVDNSIDEAMAGYCTDIEVTINAD--NSITVEDNGRGIPVDEHKKL 91 >gi|302385856|ref|YP_003821678.1| signal transduction histidine kinase, LytS [Clostridium saccharolyticum WM1] gi|302196484|gb|ADL04055.1| signal transduction histidine kinase, LytS [Clostridium saccharolyticum WM1] Length = 617 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 5/45 (11%) Query: 30 LIENSL----DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIP 69 L+ENS+ D+ + I G + D+G G+ E + Sbjct: 524 LVENSIKHGYDSGELNIMVTIRQAGDRLVISVEDDGRGIRPEVLE 568 >gi|242061528|ref|XP_002452053.1| hypothetical protein SORBIDRAFT_04g017780 [Sorghum bicolor] gi|241931884|gb|EES05029.1| hypothetical protein SORBIDRAFT_04g017780 [Sorghum bicolor] Length = 706 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 11/71 (15%) Query: 29 ELIENSLDA---ESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++NSLD ++ V + G + DNG GM +++ + + SK+ Sbjct: 164 ELLDNSLDEVVNGATYVHIDMMESKKDGTRMLLVEDNGGGMNPDKMRHCMSLGYSAKSKV 223 Query: 81 SDDFSNIHTFG 91 + I +G Sbjct: 224 KN---TIGQYG 231 >gi|269928580|ref|YP_003320901.1| multi-sensor signal transduction histidine kinase [Sphaerobacter thermophilus DSM 20745] gi|269787937|gb|ACZ40079.1| multi-sensor signal transduction histidine kinase [Sphaerobacter thermophilus DSM 20745] Length = 645 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 22 RPSIAIKELIENSLD-AESSR-VETVIAGG--GKSFFQITDNGFGMTSEEIPMAVQRH 75 R ++ L+ N++ A + +E A G G + D+G G+ E++P +R Sbjct: 533 RLDQVVRNLLHNAIKYAPARTPIEVRAARGDNGTVIVSVRDHGPGIDEEDLPFVFERF 590 >gi|227364560|ref|ZP_03848621.1| histidine kinase [Lactobacillus reuteri MM2-3] gi|325682325|ref|ZP_08161842.1| sensor histidine kinase LytS [Lactobacillus reuteri MM4-1A] gi|227070397|gb|EEI08759.1| histidine kinase [Lactobacillus reuteri MM2-3] gi|290558721|gb|ADD37854.1| two-component sensor histidine kinase [Lactobacillus reuteri] gi|324978164|gb|EGC15114.1| sensor histidine kinase LytS [Lactobacillus reuteri MM4-1A] Length = 587 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Query: 30 LIENSLD-A-ESSR----VETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTS 78 L+EN+L A + + V+ I G Q+ DNG G+ E +P + TS Sbjct: 477 LVENALKHAFGARKDHNNVQITIKQLGARLAIQVADNGEGIAPELLPKLGKEPLTS 532 >gi|254462679|ref|ZP_05076095.1| periplasmic sensor signal transduction histidine kinase [Rhodobacterales bacterium HTCC2083] gi|206679268|gb|EDZ43755.1| periplasmic sensor signal transduction histidine kinase [Rhodobacteraceae bacterium HTCC2083] Length = 600 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 10/56 (17%) Query: 30 LIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N+LDA ++ V+ ++A G + + DNG G+ E++ + T+K Sbjct: 493 LLRNALDA--TKSVKDPQVDVLLAAGETAILTVRDNGQGI--EDLDALFEPFYTTK 544 >gi|194467995|ref|ZP_03073981.1| signal transduction histidine kinase, LytS [Lactobacillus reuteri 100-23] gi|194452848|gb|EDX41746.1| signal transduction histidine kinase, LytS [Lactobacillus reuteri 100-23] Length = 586 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Query: 30 LIENSLD-A-ESSR----VETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTS 78 L+EN+L A + + V+ I G Q+ DNG G+ E +P + TS Sbjct: 476 LVENALKHAFGARKDHNNVQITIKQLGARLAIQVADNGEGIAPELLPKLGKEPLTS 531 >gi|108760671|ref|YP_628478.1| sensor histidine kinase [Myxococcus xanthus DK 1622] gi|108464551|gb|ABF89736.1| sensor histidine kinase [Myxococcus xanthus DK 1622] Length = 635 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 22 RPSIAIKELIENSLDAESSR-VETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N+L + V V+ G + + D G G+++E++P +R Sbjct: 513 RLEQVVTNLLSNALKYGAGHPVRVVVEAEGLTARLTVRDGGIGISAEDLPRIFERF 568 >gi|90415375|ref|ZP_01223309.1| DNA gyrase subunit B [marine gamma proteobacterium HTCC2207] gi|90332698|gb|EAS47868.1| DNA gyrase subunit B [marine gamma proteobacterium HTCC2207] Length = 804 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 39/253 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE---------EIPMAVQRH 75 E+++NS+D A S ++ VI ++DNG G+ +E E+ M V H Sbjct: 44 EVVDNSIDEALAGHCSEIKIVIHQD--ESITVSDNGRGIPTEMHDEGVSAAEVIMTVL-H 100 Query: 76 CTSKISDDFSNIHTFGFRG------EALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKI 128 K D+ + + G G AL +V+ LT+ G Sbjct: 101 AGGKFDDNSYKV-SGGLHGVGVSVVNAL----SVALRLTIR------RNGKVHEQHYSHG 149 Query: 129 SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFST 188 P+ + T V ++ F +P+ + + + +++ +R ++ V + Sbjct: 150 EPQGPLTIVGDTDVSGTEVHF-VPSA-DTFSNIKFHFDVLAKRLRELSFLNSGVRIVLAD 207 Query: 189 IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNAN 248 ++ + ++ G + + N V + + N G Sbjct: 208 ERNGKEEVYAY--EGGLRAFVEFLNTNKTTVNKVMHFSTQRDDGTSVEVALQW-NDGFQE 264 Query: 249 QFYVFINGRTVQD 261 + + N +D Sbjct: 265 NIHCYTNNIPQRD 277 >gi|148544133|ref|YP_001271503.1| signal transduction histidine kinase, LytS [Lactobacillus reuteri DSM 20016] gi|184153504|ref|YP_001841845.1| two-component sensor histidine kinase [Lactobacillus reuteri JCM 1112] gi|148531167|gb|ABQ83166.1| signal transduction histidine kinase, LytS [Lactobacillus reuteri DSM 20016] gi|183224848|dbj|BAG25365.1| two-component sensor histidine kinase [Lactobacillus reuteri JCM 1112] Length = 587 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Query: 30 LIENSLD-A-ESSR----VETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTS 78 L+EN+L A + + V+ I G Q+ DNG G+ E +P + TS Sbjct: 477 LVENALKHAFGARKDHNNVQITIKQLGARLAIQVADNGEGIAPELLPKLGKEPLTS 532 >gi|313665344|ref|YP_004047215.1| DNA topoisomerase IV, B subunit [Mycoplasma leachii PG50] gi|312949281|gb|ADR23877.1| DNA topoisomerase IV, B subunit [Mycoplasma leachii PG50] Length = 643 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 22/40 (55%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A ++++ + + I+DNG G+ Sbjct: 43 EIVDNAIDEALAGYCTQIDVTLEKD--NSITISDNGRGIP 80 >gi|288940508|ref|YP_003442748.1| DNA topoisomerase IV subunit B [Allochromatium vinosum DSM 180] gi|288895880|gb|ADC61716.1| DNA topoisomerase IV, B subunit [Allochromatium vinosum DSM 180] Length = 634 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A + R+ + G ++ D+G GM + Sbjct: 30 TRPNHLAQEVIDNSVDEALAGHAKRISVTLHADG--SLEVEDDGRGMPVD 77 >gi|148645279|gb|ABR01163.1| DNA gyrase subunit B [Gordonia lacunae] Length = 504 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 66/173 (38%), Gaps = 24/173 (13%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT----SEEIPMA----VQRH 75 E+++NS+D A +SRV+ + A GG Q+ D+G G+ +P Q H Sbjct: 19 EVVDNSVDEAMAGFASRVDVTLLADGG---VQVVDDGRGIPTGMHRTGVPTVEVVMTQLH 75 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D + + G G + + A+S + L + + S K ++ Sbjct: 76 AGGKFDSDAYAV-SGGLHGVGISVVNALSTKVELE--IQNDGYNWEQTYSYAKPGALEQG 132 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFS 187 + T VR P F ++ + + ++ MA ++ T + Sbjct: 133 SATRKTGTTVRF----WPDPEIFTETTRFNAETVARRLQEMAFLNKGLTITLT 181 >gi|144899573|emb|CAM76437.1| Heat shock protein Hsp90 [Magnetospirillum gryphiswaldense MSR-1] Length = 621 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 27/191 (14%), Positives = 53/191 (27%), Gaps = 47/191 (24%) Query: 19 IIERPSI----AIKELIENSLDA------------------ESSRVETVI-AGGGKSFFQ 55 ++ ++EL+ N+ DA + I G Sbjct: 19 VVHSLYSNKEIFLRELVSNASDACDKLRYESQTQTHLAEGGGEFCIRIQIDKDAGT--LT 76 Query: 56 ITDNGFGMTSEEI-------PMAVQRHCTSKISDDFSNIHTF------GFRGEALPSIGA 102 I DNG GM +++ + S++S D + GF S Sbjct: 77 IADNGIGMNHDDLISNLGTIAKSGTAEFMSRLSGDAKKDTSLIGQFGVGF-----YSAFM 131 Query: 103 VSH-LTLMSRPPQNNTGAQIAIS---GEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFL 158 V+ +T+ +R G + I+ ++ +RD Sbjct: 132 VADTVTVFTRKAGETQGWRWESDGKGSFTIAEDDSAERGARMVLNLRDDAKEFLEAHRLR 191 Query: 159 KSEQVETNLIT 169 + ++ I Sbjct: 192 AIIKRYSDHIA 202 >gi|15615315|ref|NP_243618.1| two-component sensor histidine kinase [Bacillus halodurans C-125] gi|15213978|sp|Q9K997|DCTS_BACHD RecName: Full=Probable C4-dicarboxylate sensor kinase gi|10175373|dbj|BAB06471.1| two-component sensor histidine kinase [Bacillus halodurans C-125] Length = 532 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 17/86 (19%) Query: 30 LIENSLDAESSR------VETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 LI+NSLDA SS V I ++ DNG G+ E R ++K Sbjct: 432 LIDNSLDAFSSTQDQNKTVHVFIGEENDFLKIRVRDNGEGIREEVREKMFVRGFSTK--- 488 Query: 83 DFSNIHTFGFRGEALPSI-GAVSHLT 107 T G RG L I V + Sbjct: 489 -----STSG-RGIGLFLIQAIVERVE 508 >gi|23978284|dbj|BAC21125.1| DNA gyrase B subunit [Chroococcidiopsis sp. PCC 7431] Length = 396 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E + G Q+ D+G G+ ++ Sbjct: 10 VYEVVDNSIDEALAGYCTHIEIDLNADG--SVQVVDDGRGIPTD 51 >gi|284928768|ref|YP_003421290.1| DNA gyrase subunit B [cyanobacterium UCYN-A] gi|284809227|gb|ADB94932.1| DNA gyrase subunit B [cyanobacterium UCYN-A] Length = 642 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TDNG G+ ++ Sbjct: 41 VYEVVDNSIDEALAGHCTHIEVDINIDG--SVTVTDNGRGIPTD 82 >gi|258510676|ref|YP_003184110.1| signal transduction histidine kinase with CheB and CheR activity [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477402|gb|ACV57721.1| signal transduction histidine kinase with CheB and CheR activity [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 1215 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 30 LIENSLDA--ESSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N+++A +E + G ++ D G G+ +++ + T+K Sbjct: 1102 LLKNAIEAMPNGGTIEVTVERDGDHVVIRVRDEGVGIPQDKMKKLGEPFYTTK 1154 >gi|126729384|ref|ZP_01745198.1| two-component sensor histidine kinase [Sagittula stellata E-37] gi|126710374|gb|EBA09426.1| two-component sensor histidine kinase [Sagittula stellata E-37] Length = 319 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 21 ERPSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E ++ + +L+ N+++ ++RV GK+ + DNG G++ T Sbjct: 218 EGVAVVLDQLLNNAVEHGATRVTVTATQAAGKTTLDVQDNGSGISEGNAARIFDPFFT 275 >gi|330963716|gb|EGH63976.1| bacteriophytochrome [Pseudomonas syringae pv. actinidiae str. M302091] Length = 918 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 15 AAGEII----ERPSIAIKELIENSLDAESS----RVETV-IAGGGKSFFQITDNGFGMTS 65 A G +I ER + +L+ N++ + + R+ +A G F+++D+G G+ + Sbjct: 565 AQGLVIDADPERIFQVLSKLVGNAI--KFTPKGGRINIDAVADGNDVLFRVSDDGIGIPA 622 Query: 66 EEIPMAVQRHCTSK 79 E +P QR+ + K Sbjct: 623 EHLPYIFQRYWSVK 636 >gi|296273415|ref|YP_003656046.1| integral membrane sensor signal transduction histidine kinase [Arcobacter nitrofigilis DSM 7299] gi|296097589|gb|ADG93539.1| integral membrane sensor signal transduction histidine kinase [Arcobacter nitrofigilis DSM 7299] Length = 438 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 23 PSIAIKELIENSLDA----ESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCT 77 + + +I N+LDA E+ ++E I+ I DNG G+ ++ + + + T Sbjct: 335 LAQVLVAIISNALDAIKTIENRKIEIEISSNTADVILSIKDNGKGIKAKLLDKIFEPYFT 394 Query: 78 SK 79 +K Sbjct: 395 TK 396 >gi|291545172|emb|CBL18281.1| Molecular chaperone, HSP90 family [Ruminococcus sp. 18P13] Length = 632 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 56/151 (37%), Gaps = 37/151 (24%) Query: 27 IKELIENSLDA--------------ESSR----VETVIAGGGKSFFQITDNGFGMTSEEI 68 ++ELI N+ DA +R ++ I ++ ITDNG GMT EE+ Sbjct: 29 LRELISNASDAMDKLYFRSLTDEKVGMNREDFAIDLKIDKDARTL-TITDNGIGMTQEEL 87 Query: 69 PMAVQRHCTS---------KISDDFSNIHTF--GFRGEALPSIGAVS-HLTLMSRPPQNN 116 + S K+ DD I F GF S V+ +T+ S+ ++ Sbjct: 88 EKNLGTIANSGSLKFKNENKLEDDVDIIGQFGVGF-----YSAFMVAKRVTVRSKAYGSD 142 Query: 117 TGAQIAISGEKISSVRPVAMNP-GTIVEVRD 146 Q G ++ P GT + + Sbjct: 143 EAYQWQSEGVDGYTIEPCDKETVGTEIILEI 173 >gi|213585985|ref|ZP_03367811.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 173 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 1/86 (1%) Query: 438 LIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAI 497 + + + + +Q LL P + + E A + + L LGI+ + + I Sbjct: 23 RWLRQAQLTPGQSPVCAQPLLIPLRLKVSADEKAALQKAQSLLGELGIEFQS-DAQHVTI 81 Query: 498 REIPAILSKKNIPQLLRDIIDEIIDS 523 R +P L ++N+ L+ ++I + Sbjct: 82 RAVPLPLRQQNLQILIPELIGYLAQQ 107 >gi|194365224|ref|YP_002027834.1| DNA topoisomerase IV subunit B [Stenotrophomonas maltophilia R551-3] gi|194348028|gb|ACF51151.1| DNA topoisomerase IV, B subunit [Stenotrophomonas maltophilia R551-3] Length = 629 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + +E + G +++D+G GM EE + Sbjct: 31 RPNHLAQEVIDNSVDEALAGHARSIEITLFKDG--SVEVSDDGRGMPVDIHPEEKIPGVE 88 Query: 70 MAVQR-HCTSKISD 82 + + R H K ++ Sbjct: 89 LILTRLHAGGKFNN 102 >gi|15669217|ref|NP_248022.1| DNA topoisomerase VI subunit B [Methanocaldococcus jannaschii DSM 2661] gi|1591683|gb|AAB99032.1| DNA topoisomerase VI, subunit B (top6B) [Methanocaldococcus jannaschii DSM 2661] Length = 686 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Query: 20 IERPSIAIKELIENSLDA--ESS---RVETVIAGGGKS--FFQITDNGFGMTSEEIPMAV 72 I + I EL+ NSLDA E+ ++ I G + DNG G+ E IP Sbjct: 61 IRSLTTIIHELVTNSLDACEEAGILPDIKVEIEKLGADHYKVAVEDNGPGIPLEFIPKVF 120 >gi|312914206|dbj|BAJ38180.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] Length = 630 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + RV+ ++ ++ D+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHAKRVDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 88 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDGQVYNIAFENGEK 146 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP--KVSF 184 + +F S + + + V++ A+ P +++F Sbjct: 147 VQDLQVVGTCGKRNTGTSVHFW----PDESFFDSPRFSVSRLMHVLKAKAVLCPGVEITF 202 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 S + N E ++ + Sbjct: 203 KDEVNNSEQRWCYQDGLNDYLGEAVNGL 230 >gi|228988037|ref|ZP_04148138.1| Sensor histidine kinase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771671|gb|EEM20136.1| Sensor histidine kinase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 395 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ ++IP + T+K Sbjct: 303 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKDKIPKLNEAFYTTK 354 >gi|229141512|ref|ZP_04270046.1| Sensor histidine kinase [Bacillus cereus BDRD-ST26] gi|228641912|gb|EEK98209.1| Sensor histidine kinase [Bacillus cereus BDRD-ST26] Length = 395 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ ++IP + T+K Sbjct: 303 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKDKIPKLNEAFYTTK 354 >gi|289827109|ref|ZP_06545898.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 631 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + RV+ ++ ++ D+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHAKRVDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 88 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDGQVYNIAFENGEK 146 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP--KVSF 184 + +F S + + + V++ A+ P +++F Sbjct: 147 VQDLQVVGTCGKRNTGTSVHFW----PDESFFDSPRFSVSRLMHVLKAKAVLCPGVEITF 202 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 S + N E ++ + Sbjct: 203 KDEVNNSEQRWCYQDGLNDYLGEAVNGL 230 >gi|213855672|ref|ZP_03383912.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 432 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + RV+ ++ ++ D+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHAKRVDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 88 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDGQVYNIAFENGEK 146 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP--KVSF 184 + +F S + + + V++ A+ P +++F Sbjct: 147 VQDLQVVGTCGKRNTGTSVHFW----PDESFFDSPRFSVSRLMHVLKAKAVLCPGVEITF 202 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 S + N E ++ + Sbjct: 203 KDEVNNSEQRWCYQDGLNDYLGEAVNGL 230 >gi|213615568|ref|ZP_03371394.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 497 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + RV+ ++ ++ D+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHAKRVDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 88 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDGQVYNIAFENGEK 146 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP--KVSF 184 + +F S + + + V++ A+ P +++F Sbjct: 147 VQDLQVVGTCGKRNTGTSVHFW----PDESFFDSPRFSVSRLMHVLKAKAVLCPGVEITF 202 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 S + N E ++ + Sbjct: 203 KDEVNNSEQRWCYQDGLNDYLGEAVNGL 230 >gi|168238136|ref|ZP_02663194.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737821|ref|YP_002116136.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194713323|gb|ACF92544.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197289017|gb|EDY28388.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 630 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + RV+ ++ ++ D+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHAKRVDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 88 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDGQVYNIAFENGEK 146 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP--KVSF 184 + +F S + + + V++ A+ P +++F Sbjct: 147 VQDLQVVGTCGKRNTGTSVHFW----PDESFFDSPRFSVSRLMHVLKAKAVLCPGVEITF 202 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 S + N E ++ + Sbjct: 203 KDEVNNSEQRWCYQDGLNDYLGEAVNGL 230 >gi|154238|gb|AAA27182.1| topoisomerase IV subunit E [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 630 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + RV+ ++ ++ D+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHAKRVDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 88 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDGQVYNIAFENGEK 146 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP--KVSF 184 + +F S + + + V++ A+ P +++F Sbjct: 147 VQDLQVVGTCGKRNTGTSVHFW----PDESFFDSPRFSVSRLMHVLKAKAVLCPGVEITF 202 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 S + N E ++ + Sbjct: 203 KDEVNNSEQRWCYQDGLNDYLGEAVNGL 230 >gi|16761956|ref|NP_457573.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766481|ref|NP_462096.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143443|ref|NP_806785.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56415122|ref|YP_152197.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62181695|ref|YP_218112.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161616170|ref|YP_001590135.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551906|ref|ZP_02345659.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167990269|ref|ZP_02571369.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168231780|ref|ZP_02656838.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168243007|ref|ZP_02667939.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168262861|ref|ZP_02684834.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463611|ref|ZP_02697528.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819756|ref|ZP_02831756.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443762|ref|YP_002042448.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450180|ref|YP_002047178.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194468478|ref|ZP_03074462.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197250406|ref|YP_002148108.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262850|ref|ZP_03162924.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197364051|ref|YP_002143688.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243780|ref|YP_002217161.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200388424|ref|ZP_03215036.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204928305|ref|ZP_03219505.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205354097|ref|YP_002227898.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858440|ref|YP_002245091.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213424345|ref|ZP_03357169.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213579856|ref|ZP_03361682.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213645890|ref|ZP_03375943.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224584982|ref|YP_002638781.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238909982|ref|ZP_04653819.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|61229760|sp|P0A2I5|PARE_SALTY RecName: Full=DNA topoisomerase 4 subunit B; AltName: Full=Topoisomerase IV subunit B gi|61229761|sp|P0A2I6|PARE_SALTI RecName: Full=DNA topoisomerase 4 subunit B; AltName: Full=Topoisomerase IV subunit B gi|25292821|pir||AE0889 topoisomerase IV chain B [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421737|gb|AAL22055.1| DNA topoisomerase IV, subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504258|emb|CAD03013.1| topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhi] gi|29139077|gb|AAO70645.1| topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129379|gb|AAV78885.1| topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62129328|gb|AAX67031.1| DNA topoisomerase IV, subunit B [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|149693021|emb|CAK55545.1| topoisomerase IV subunit [Salmonella enterica subsp. enterica serovar Typhi] gi|149693023|emb|CAK55546.1| topoisomerase IV subunit [Salmonella enterica subsp. enterica serovar Typhi] gi|161365534|gb|ABX69302.1| hypothetical protein SPAB_03972 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402425|gb|ACF62647.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408484|gb|ACF68703.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194454842|gb|EDX43681.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195633404|gb|EDX51818.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197095528|emb|CAR61093.1| topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197214109|gb|ACH51506.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241105|gb|EDY23725.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197938296|gb|ACH75629.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199605522|gb|EDZ04067.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322627|gb|EDZ07824.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273878|emb|CAR38879.1| topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205323370|gb|EDZ11209.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205331076|gb|EDZ17840.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333857|gb|EDZ20621.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337845|gb|EDZ24609.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343316|gb|EDZ30080.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348386|gb|EDZ35017.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710243|emb|CAR34600.1| topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469510|gb|ACN47340.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261248311|emb|CBG26148.1| topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995372|gb|ACY90257.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159735|emb|CBW19254.1| topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|320087633|emb|CBY97397.1| DNA topoisomerase IV, B subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225861|gb|EFX50915.1| Topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613584|gb|EFY10525.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621176|gb|EFY18034.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624239|gb|EFY21073.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628023|gb|EFY24812.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633140|gb|EFY29882.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636282|gb|EFY32990.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322643535|gb|EFY40096.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647448|gb|EFY43937.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648633|gb|EFY45080.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653685|gb|EFY50011.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657793|gb|EFY54061.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663894|gb|EFY60093.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669093|gb|EFY65244.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672912|gb|EFY69019.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678097|gb|EFY74160.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681273|gb|EFY77306.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687796|gb|EFY83763.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716181|gb|EFZ07752.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131542|gb|ADX18972.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323195608|gb|EFZ80785.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199710|gb|EFZ84800.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202541|gb|EFZ87581.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207970|gb|EFZ92916.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212478|gb|EFZ97295.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215040|gb|EFZ99788.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222770|gb|EGA07135.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224148|gb|EGA08441.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230472|gb|EGA14590.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235176|gb|EGA19262.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239216|gb|EGA23266.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244426|gb|EGA28432.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247042|gb|EGA31008.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253476|gb|EGA37305.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256218|gb|EGA39954.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323267298|gb|EGA50782.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269299|gb|EGA52754.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624937|gb|EGE31282.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326629215|gb|EGE35558.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332990047|gb|AEF09030.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 630 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + RV+ ++ ++ D+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHAKRVDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 88 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDGQVYNIAFENGEK 146 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP--KVSF 184 + +F S + + + V++ A+ P +++F Sbjct: 147 VQDLQVVGTCGKRNTGTSVHFW----PDESFFDSPRFSVSRLMHVLKAKAVLCPGVEITF 202 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 S + N E ++ + Sbjct: 203 KDEVNNSEQRWCYQDGLNDYLGEAVNGL 230 >gi|47565206|ref|ZP_00236249.1| sensor histidine kinase, putative [Bacillus cereus G9241] gi|47557992|gb|EAL16317.1| sensor histidine kinase, putative [Bacillus cereus G9241] Length = 406 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ ++IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKDKIPKLNEAFYTTK 365 >gi|332225325|ref|XP_003261831.1| PREDICTED: LOW QUALITY PROTEIN: MORC family CW-type zinc finger protein 1-like [Nomascus leucogenys] Length = 985 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 16/73 (21%) Query: 29 ELIENSLDAESSRVET-VIAG----GGKSFFQITDNGFGMTSEEIP--MAVQRHCTSKIS 81 EL++N+ DA + R++ + GG + + D+G GM+ EE + R SK Sbjct: 34 ELLDNARDAGAERLDVFSVDNEKLQGGFTLCFL-DDGCGMSPEEASDIIYFGR---SK-- 87 Query: 82 DDFSNIHTFGFRG 94 + T F G Sbjct: 88 ---KRLSTMKFIG 97 >gi|300866717|ref|ZP_07111401.1| Response regulator receiver domain protein [Oscillatoria sp. PCC 6506] gi|300335317|emb|CBN56561.1| Response regulator receiver domain protein [Oscillatoria sp. PCC 6506] Length = 401 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 25/98 (25%) Query: 30 LIENSLDA----ESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTSKIS--D 82 L EN++DA + + + + + + D G G+ SE + T+K++ + Sbjct: 292 LAENAIDAMWGEKVKELTIITRQDDRRIYIDVKDTGCGIASENMSKIFDPFYTTKLANYE 351 Query: 83 DFSN-IHT---FG----------FRGEALPSIGAVSHL 106 D + T G F+GE I S L Sbjct: 352 DREAGVPTGIGLGLYTCLELLKPFKGE----IAVSSKL 385 >gi|288554611|ref|YP_003426546.1| DNA gyrase subunit B [Bacillus pseudofirmus OF4] gi|288545771|gb|ADC49654.1| DNA gyrase subunit B [Bacillus pseudofirmus OF4] Length = 646 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ I + + DNG G+ Sbjct: 53 EIVDNSIDEAMAGHCDTIQVTIEED--NSITVEDNGRGIP 90 >gi|115956019|ref|XP_001183347.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 1441 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 88/279 (31%), Gaps = 42/279 (15%) Query: 26 AIKELIENSLDA-----ESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPM-AVQRHC 76 AI ELI+NSL A +E + G KS + DNG GMT+ E+ A+ R Sbjct: 123 AIAELIDNSLSATVNNVGPRNIEIRLYLDETGDKSMVCVLDNGKGMTTRELNNWAIYRL- 181 Query: 77 TSKI--------SDDFSNIHTFG----FRG----EALPSIGAVSHLTLMSRPPQNNTGAQ 120 SK ++D + F G +A IG + ++S+P + + Sbjct: 182 -SKFNRKQENNSNEDAHVPRSLNSDISFFGVGGKQAAFFIGD--SVRMISKPKYSKDVHE 238 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLN--FLKSEQVETNLITDVIRRMAIA 178 + +S E+ D++ I E ++ +++ Sbjct: 239 MTVSKEEFERREKNK---------EDIYKGIIHNRQPGEGSDVSPENEILQKLVKEEEGK 289 Query: 179 YPKVSFTFSTIKSNRYKMNF--QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 ++I S+ K S+ I N L+ Sbjct: 290 ENFTHVVITSINSDHMKFLKEDFSSWSTLLAHIYHYYIHGPQGNQSHLSNSMGRTPSPCK 349 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + Q + N R ++D IR+A Sbjct: 350 NIDISITMYKKGQQHKQRNLRDIEDDPQSIFIRSAKDTF 388 >gi|115653074|ref|XP_794741.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 1388 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 51/279 (18%), Positives = 88/279 (31%), Gaps = 42/279 (15%) Query: 26 AIKELIENSLDA-----ESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPM-AVQRHC 76 AI ELI+NSL A +E + G KS + DNG GMT+ E+ A+ R Sbjct: 123 AIAELIDNSLSATVNNVGPRNIEIRLYLDETGDKSMVCVLDNGKGMTTRELNNWAIYRL- 181 Query: 77 TSKI--------SDDFSNIHTFG----FRG----EALPSIGAVSHLTLMSRPPQNNTGAQ 120 SK ++D + F G +A IG + ++S+P + + Sbjct: 182 -SKFNRKQENNSNEDAHVPRSLNSDISFFGVGGKQAAFFIGD--SVRMISKPKYSKDVHE 238 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLN--FLKSEQVETNLITDVIRRMAIA 178 + +S E+ D++ I E ++ +++ Sbjct: 239 MTVSKEEFERREKNK---------EDIYKGIIHNRQPGEGSDVSPENEILQKLVKEEEGK 289 Query: 179 YPKVSFTFSTIKSNRYKMNF--QSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 ++I S+ K S+ I N L+ Sbjct: 290 ENFTHVVITSINSDHMKFLKEDFSSWSTLLAHIYHYYIHGPQGNQSHLSNSMGRTPSPCK 349 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAET 275 + Q + N R ++D IR+A Sbjct: 350 NIDISITMYKKGQQHKQRNLRDIEDDPQSIFIRSAKDTF 388 >gi|206895170|ref|YP_002246548.1| sensory transduction histidine kinase [Coprothermobacter proteolyticus DSM 5265] gi|206737787|gb|ACI16865.1| sensory transduction histidine kinase [Coprothermobacter proteolyticus DSM 5265] Length = 197 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 3/52 (5%) Query: 30 LIENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCTS 78 L +NS+ A + + I K+ +I D+G GM+ + TS Sbjct: 11 LAQNSVVAGAKHITIDITADVKADHLLIRIVDDGKGMSPHLVERVTDPFFTS 62 >gi|251794042|ref|YP_003008773.1| DNA gyrase subunit beta [Paenibacillus sp. JDR-2] gi|247541668|gb|ACS98686.1| DNA gyrase, B subunit [Paenibacillus sp. JDR-2] Length = 635 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++++ + + + DNG G+ Sbjct: 43 EVVDNSIDEALAGYCTKIQVRVHED--NSITVIDNGRGIP 80 >gi|159043301|ref|YP_001532095.1| DNA topoisomerase IV subunit B [Dinoroseobacter shibae DFL 12] gi|157911061|gb|ABV92494.1| DNA topoisomerase IV, B subunit [Dinoroseobacter shibae DFL 12] Length = 654 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+I+NS+D A ++ +E + G + DNG G+ ++ Sbjct: 51 VAEIIDNSMDEAVAGHATWIEVELHANG--HVSVRDNGRGIPTD 92 >gi|94983847|gb|ABF50628.1| DNA topoisomerase IV subunit B [Spiroplasma chinense] Length = 554 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 56/186 (30%), Gaps = 32/186 (17%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT--------SEEIPMAVQ-RH 75 E+++NS+D A + + + G + DNG G+ + H Sbjct: 14 EIVDNSIDEALAGVCTEINVTLEKDG--SVTVKDNGRGVPIGMHKGSNKSTPEIIFSVLH 71 Query: 76 CTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS 129 K D + G G AL S + + +G K+S Sbjct: 72 AGGKFGGDGYK-TSGGLHGVGSSVVNALSS-----KFKV-TIHRDGLISTIKFNNGGKLS 124 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 S +V + + + I++ ++ A+ + T Sbjct: 125 SPLKQIGTS----KVTGTMVNFLPDETMFSTTKFSFSTISERLKESALLNSGLKITLKDE 180 Query: 190 KSNRYK 195 +S++Y Sbjct: 181 RSDKYV 186 >gi|149203080|ref|ZP_01880051.1| DNA topoisomerase IV subunit B [Roseovarius sp. TM1035] gi|149143626|gb|EDM31662.1| DNA topoisomerase IV subunit B [Roseovarius sp. TM1035] Length = 651 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+I+NS+D A ++ +E + G + DNG G+ + Sbjct: 47 VAEIIDNSMDEAVAGHATWIEVELHANG--HVSVRDNGRGIPVD 88 >gi|19553805|ref|NP_601807.1| two-component system, sensory transduction histidine kinase [Corynebacterium glutamicum ATCC 13032] gi|62391445|ref|YP_226847.1| two component sensor kinase [Corynebacterium glutamicum ATCC 13032] gi|21325378|dbj|BAB99999.1| Two-component system, sensory transduction histidine kinases [Corynebacterium glutamicum ATCC 13032] gi|41326786|emb|CAF21268.1| probable two component sensor kinase [Corynebacterium glutamicum ATCC 13032] Length = 485 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 9/62 (14%) Query: 21 ERPSIAIKELIENSL-----DAESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQR 74 R + L+ N L DA V I G++ + DNG GM+ E+ +R Sbjct: 376 TRLHQVLTNLVANGLNHGGPDA---EVSIEINTDGQNVRILVADNGVGMSEEDAQHIFER 432 Query: 75 HC 76 Sbjct: 433 FY 434 >gi|85705733|ref|ZP_01036830.1| DNA topoisomerase IV subunit B [Roseovarius sp. 217] gi|85669723|gb|EAQ24587.1| DNA topoisomerase IV subunit B [Roseovarius sp. 217] Length = 662 Score = 46.6 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+I+NS+D A ++ +E + G + DNG G+ + Sbjct: 58 VAEIIDNSMDEAVAGHATWIEVELHANG--HVSVRDNGRGIPVD 99 >gi|315650187|ref|ZP_07903262.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Eubacterium saburreum DSM 3986] gi|315487544|gb|EFU77852.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Eubacterium saburreum DSM 3986] Length = 650 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I + + DNG G+ + Sbjct: 52 VYEIVDNSVDEALAGFCTEIEVSINED--NSITVKDNGRGIPVD 93 >gi|219852784|ref|YP_002467216.1| DNA topoisomerase VI subunit B [Methanosphaerula palustris E1-9c] gi|219547043|gb|ACL17493.1| DNA topoisomerase VI, B subunit [Methanosphaerula palustris E1-9c] Length = 600 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 7/53 (13%) Query: 27 IKELIENSLDA--ESS---RVETVIAG--GGKSFFQITDNGFGMTSEEIPMAV 72 IKE ++N+LDA E+ + + G + + DNG G+ E++P Sbjct: 40 IKEAVDNALDACEEAEVLPDIYIEVKRKTGDLFWIMVEDNGPGIMPEQVPFVF 92 >gi|254465442|ref|ZP_05078853.1| PAS/PAC sensor signal transduction histidine kinase [Rhodobacterales bacterium Y4I] gi|206686350|gb|EDZ46832.1| PAS/PAC sensor signal transduction histidine kinase [Rhodobacterales bacterium Y4I] Length = 465 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 6/62 (9%) Query: 30 LIENSL---D--AESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTSKISDD 83 L+ N++ D A + VE + G + + DNG G+ E + T K D+ Sbjct: 357 LVSNAIKHNDQGAGAGAVEISVEDAGDHYIFSVADNGPGIDPEYHDQIFKMFQTLKSRDE 416 Query: 84 FS 85 Sbjct: 417 VE 418 >gi|163867363|ref|YP_001608557.1| two-component sensor kinase BatS [Bartonella tribocorum CIP 105476] gi|161017004|emb|CAK00562.1| two-component sensor kinase BatS [Bartonella tribocorum CIP 105476] Length = 594 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 5/75 (6%) Query: 22 RPSIAIKELIENS---LDAESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCT 77 R I L+EN+ + ++ + + I DNG G+ SE I +R T Sbjct: 478 RLGQVISNLLENARSFIPRNRGKISITMKSHASTLILTIEDNGPGIRSENIERIFERFYT 537 Query: 78 SKISDDFSNIHT-FG 91 + ++D ++ G Sbjct: 538 DRPNEDAFGQNSGLG 552 >gi|157376201|ref|YP_001474801.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella sediminis HAW-EB3] gi|157318575|gb|ABV37673.1| PAS/PAC sensor signal transduction histidine kinase [Shewanella sediminis HAW-EB3] Length = 371 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 S AI L+ NS++A ++RVE +TDNG G+ ++ T+K Sbjct: 249 LSSAINNLVVNSIEAGATRVELKGRESAHELQIDVTDNGKGLDKAMQKKVMEPFFTTK 306 >gi|145294048|ref|YP_001136869.1| DNA gyrase subunit B [Corynebacterium glutamicum R] gi|140843968|dbj|BAF52967.1| hypothetical protein [Corynebacterium glutamicum R] Length = 684 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 35/181 (19%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP--------MAVQRH 75 E+++NS+D A +++VE + GG Q+ D+G G+ + P + Q H Sbjct: 44 EVVDNSVDEAMAGHATKVEVTLLEDGG---VQVVDDGRGIPVDMHPSGAPTVQVVMTQLH 100 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN--NTGAQIAISGEKISSVRP 133 K D + + G G + + A+S +R + G + EK Sbjct: 101 AGGKFDSDSYAV-SGGLHGVGISVVNALS-----TRVEADIKLHGKHWYQNFEKSVPDEL 154 Query: 134 VAM----NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 + GT + ++ + + I+ ++ MA ++ T + Sbjct: 155 IEGGNARGTGTTIRFW-------PDAEIFETTEFDFETISRRLQEMAFLNKGLTITLTDN 207 Query: 190 K 190 + Sbjct: 208 R 208 >gi|21322770|dbj|BAB97399.1| DNA gyrase (topoisomerase II) B subunit [Corynebacterium glutamicum ATCC 13032] Length = 711 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 35/181 (19%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP--------MAVQRH 75 E+++NS+D A +++VE + GG Q+ D+G G+ + P + Q H Sbjct: 71 EVVDNSVDEAMAGHATKVEVTLLEDGG---VQVVDDGRGIPVDMHPSGAPTVQVVMTQLH 127 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN--NTGAQIAISGEKISSVRP 133 K D + + G G + + A+S +R + G + EK Sbjct: 128 AGGKFDSDSYAV-SGGLHGVGISVVNALS-----TRVEADIKLHGKHWYQNFEKSVPDEL 181 Query: 134 VAM----NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 + GT + ++ + + I+ ++ MA ++ T + Sbjct: 182 IEGGNARGTGTTIRFW-------PDAEIFETTEFDFETISRRLQEMAFLNKGLTITLTDN 234 Query: 190 K 190 + Sbjct: 235 R 235 >gi|19551255|ref|NP_599257.1| DNA gyrase subunit B [Corynebacterium glutamicum ATCC 13032] gi|62388898|ref|YP_224300.1| DNA gyrase subunit B [Corynebacterium glutamicum ATCC 13032] gi|41324231|emb|CAF18571.1| DNA GYRASE SUBUNIT B [Corynebacterium glutamicum ATCC 13032] Length = 684 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 66/181 (36%), Gaps = 35/181 (19%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP--------MAVQRH 75 E+++NS+D A +++VE + GG Q+ D+G G+ + P + Q H Sbjct: 44 EVVDNSVDEAMAGHATKVEVTLLEDGG---VQVVDDGRGIPVDMHPSGAPTVQVVMTQLH 100 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN--NTGAQIAISGEKISSVRP 133 K D + + G G + + A+S +R + G + EK Sbjct: 101 AGGKFDSDSYAV-SGGLHGVGISVVNALS-----TRVEADIKLHGKHWYQNFEKSVPDEL 154 Query: 134 VAM----NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 + GT + ++ + + I+ ++ MA ++ T + Sbjct: 155 IEGGNARGTGTTIRFW-------PDAEIFETTEFDFETISRRLQEMAFLNKGLTITLTDN 207 Query: 190 K 190 + Sbjct: 208 R 208 >gi|261414676|ref|YP_003248359.1| Heat shock protein Hsp90-like protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371132|gb|ACX73877.1| Heat shock protein Hsp90-like protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326581|gb|ADL25782.1| heat shock protein HtpG [Fibrobacter succinogenes subsp. succinogenes S85] Length = 628 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 19/64 (29%) Query: 27 IKELIENSLDA-----------------ESS-RVETVIAGGGKSFFQITDNGFGMTSEEI 68 ++EL+ N+ DA + R++ + GK + DNG GM E++ Sbjct: 31 LRELVSNAADALDKRRFLSLSNSSLLPVGTQLRIDISVNKEGKRLI-VEDNGIGMNKEDL 89 Query: 69 PMAV 72 + Sbjct: 90 INCL 93 >gi|78188414|ref|YP_378752.1| multi-sensor signal transduction histidine kinase [Chlorobium chlorochromatii CaD3] gi|78170613|gb|ABB27709.1| multi-sensor signal transduction histidine kinase [Chlorobium chlorochromatii CaD3] Length = 595 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 9/58 (15%) Query: 26 AIKELIENSLDA-----ESSRVETVIAGGGKSFFQ--ITDNGFGMTSEEIPMAVQRHC 76 I+ L++N+++A R+ K + + DNG G+ ++ +R Sbjct: 487 VIRNLVDNAINAVDERNG--RIRISAFAMNKEVVRLEVEDNGVGIAKADLDRIFERFY 542 >gi|55378274|ref|YP_136124.1| light- and oxygen-sensing transcription regulator [Haloarcula marismortui ATCC 43049] gi|55230999|gb|AAV46418.1| putative light- and oxygen-sensing transcription regulator [Haloarcula marismortui ATCC 43049] Length = 1295 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 12/67 (17%) Query: 22 RPSIAIKELIENSL----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAV----- 72 R + EL+ENSL D S RV+ + S + D+G G+ E+ + Sbjct: 1191 RLHRILGELVENSLEHGGDDPSVRVDVQVDRQTVS-ITVADDGPGIPQHELDVVTGDEPI 1249 Query: 73 --QRHCT 77 RH T Sbjct: 1250 TQLRHGT 1256 >gi|85709920|ref|ZP_01040985.1| heat shock protein G-like protein [Erythrobacter sp. NAP1] gi|85688630|gb|EAQ28634.1| heat shock protein G-like protein [Erythrobacter sp. NAP1] Length = 553 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 20/104 (19%) Query: 25 IAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDF 84 + E I NS DAE+ V I S F I D+G GMT+E+ + SK D Sbjct: 31 TVLGEAISNSWDAEARNVWITIDKEN-SSFTIKDDGIGMTAEDFQGKFLKVGYSKRKDGT 89 Query: 85 SNIHTFGFRGE------------ALPSIGAVSHLTLMSRPPQNN 116 GE AL S +++ ++ N+ Sbjct: 90 YKTE-----GERPFIGAKGIGKLALLSCAQ--KVSVFTKTEGND 126 >gi|332859522|ref|XP_515079.3| PREDICTED: MORC family CW-type zinc finger protein 2 [Pan troglodytes] Length = 1011 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ GG + D+G GM S + +Q ++K + + Sbjct: 35 ELVDNARDADATRIDIYAERREDLRGGFMLCFL-DDGAGMDSSDAASVIQFGKSAKRTPE 93 Query: 84 FSNIHTFG 91 + I +G Sbjct: 94 STQIGQYG 101 >gi|88607620|ref|YP_505297.1| DNA gyrase, B subunit [Anaplasma phagocytophilum HZ] gi|88598683|gb|ABD44153.1| DNA gyrase, B subunit [Anaplasma phagocytophilum HZ] Length = 793 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N++D A ++++ VIA G +TDNG G+ + Sbjct: 41 EVIDNAIDEALAGFCNKIDIVIAADG--SISVTDNGRGIPID 80 >gi|297193291|ref|ZP_06910689.1| DNA gyrase subunit B [Streptomyces pristinaespiralis ATCC 25486] gi|297151724|gb|EDY62302.2| DNA gyrase subunit B [Streptomyces pristinaespiralis ATCC 25486] Length = 688 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I A GG ++ DNG G+ Sbjct: 67 VQEVVDNSVDEAMAGHADTIDVTILADGG---VRVIDNGRGIP 106 >gi|297203051|ref|ZP_06920448.1| two-component system sensor kinase [Streptomyces sviceus ATCC 29083] gi|297148281|gb|EDY56081.2| two-component system sensor kinase [Streptomyces sviceus ATCC 29083] Length = 508 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 8/69 (11%) Query: 22 RPSIAIKELIENS---LDAESSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHC- 76 R + L+ N+ A +RV + G+ ++ DNG G+ +P +R Sbjct: 382 RLHQVVAHLLSNARMHTPAG-TRVTASVESADGRCVIRVRDNGPGIPQALLPTVFERFTR 440 Query: 77 --TSKISDD 83 TS+ D Sbjct: 441 ADTSRSRAD 449 >gi|297200945|ref|ZP_06918342.1| DNA gyrase, B subunit [Streptomyces sviceus ATCC 29083] gi|297147775|gb|EDY60918.2| DNA gyrase, B subunit [Streptomyces sviceus ATCC 29083] Length = 690 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I A GG ++ DNG G+ Sbjct: 71 VQEVVDNSVDEALAGHADTIDVTILADGG---VRVIDNGRGIP 110 >gi|326778153|ref|ZP_08237418.1| DNA gyrase, B subunit [Streptomyces cf. griseus XylebKG-1] gi|326658486|gb|EGE43332.1| DNA gyrase, B subunit [Streptomyces cf. griseus XylebKG-1] Length = 689 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I A GG ++ DNG G+ Sbjct: 67 VQEVVDNSVDEAMAGHADTIDVTILADGG---VRVIDNGRGIP 106 >gi|229187038|ref|ZP_04314188.1| Sensor histidine kinase [Bacillus cereus BGSC 6E1] gi|228596427|gb|EEK54097.1| Sensor histidine kinase [Bacillus cereus BGSC 6E1] Length = 308 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ E+IP + T+K Sbjct: 216 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKEKIPKLNEAFYTTK 267 >gi|300775992|ref|ZP_07085851.1| two component system sensor histidine kinase [Chryseobacterium gleum ATCC 35910] gi|300505125|gb|EFK36264.1| two component system sensor histidine kinase [Chryseobacterium gleum ATCC 35910] Length = 883 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 13/57 (22%) Query: 26 AIKELIENSLDAESSRVETVIAGG-------------GKSFFQITDNGFGMTSEEIP 69 AI EL++NS DA++ +V+ S I D+G GM +I Sbjct: 29 AILELVKNSFDADAKKVKVTFKNLKENDDLSVEQFSKNTSRIIIEDDGVGMNFTDIQ 85 >gi|182437498|ref|YP_001825217.1| DNA gyrase subunit B [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466014|dbj|BAG20534.1| putative DNA gyrase subunit B [Streptomyces griseus subsp. griseus NBRC 13350] Length = 681 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I A GG ++ DNG G+ Sbjct: 59 VQEVVDNSVDEAMAGHADTIDVTILADGG---VRVIDNGRGIP 98 >gi|163790923|ref|ZP_02185346.1| DNA gyrase, B subunit [Carnobacterium sp. AT7] gi|159873765|gb|EDP67846.1| DNA gyrase, B subunit [Carnobacterium sp. AT7] Length = 645 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I G + DNG G+ + Sbjct: 51 EIVDNSIDEALAGFADEINLSIEKDG--SIIVMDNGRGIPVD 90 >gi|167040764|ref|YP_001663749.1| histidine kinase [Thermoanaerobacter sp. X514] gi|256750974|ref|ZP_05491857.1| histidine kinase [Thermoanaerobacter ethanolicus CCSD1] gi|300914802|ref|ZP_07132118.1| histidine kinase [Thermoanaerobacter sp. X561] gi|307723964|ref|YP_003903715.1| histidine kinase [Thermoanaerobacter sp. X513] gi|166855004|gb|ABY93413.1| histidine kinase [Thermoanaerobacter sp. X514] gi|256750084|gb|EEU63105.1| histidine kinase [Thermoanaerobacter ethanolicus CCSD1] gi|300889737|gb|EFK84883.1| histidine kinase [Thermoanaerobacter sp. X561] gi|307581025|gb|ADN54424.1| histidine kinase [Thermoanaerobacter sp. X513] Length = 181 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 3/51 (5%) Query: 30 LIENSLDAESSRVETVIA-GGGKSFFQI--TDNGFGMTSEEIPMAVQRHCT 77 L +NS+ A + + I K ++ D+G GM+ E + T Sbjct: 11 LSQNSIRAGAKNIYIEINIDTSKDMLKVSIEDDGCGMSEELLKKVTDPFIT 61 >gi|293376413|ref|ZP_06622647.1| DNA gyrase, B subunit [Turicibacter sanguinis PC909] gi|325839309|ref|ZP_08166775.1| DNA gyrase, B subunit [Turicibacter sp. HGF1] gi|292644969|gb|EFF63045.1| DNA gyrase, B subunit [Turicibacter sanguinis PC909] gi|325490591|gb|EGC92906.1| DNA gyrase, B subunit [Turicibacter sp. HGF1] Length = 639 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I + + DNG G+ + Sbjct: 46 EIVDNSIDEALAGYCTEINVAITEN--NEIIVKDNGRGIPVD 85 >gi|19909595|dbj|BAB86993.1| DNA gyrase subunit B [Halomonas aquamarina] Length = 458 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 EL++NS+D A S + VI ++DNG G+ +E Sbjct: 9 ELVDNSIDEALAGHCSEIRVVIHAD--ESVTVSDNGRGIPTE 48 >gi|238796970|ref|ZP_04640474.1| DNA topoisomerase 4 subunit B [Yersinia mollaretii ATCC 43969] gi|238719230|gb|EEQ11042.1| DNA topoisomerase 4 subunit B [Yersinia mollaretii ATCC 43969] Length = 631 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 69/205 (33%), Gaps = 23/205 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + R++ ++ ++ D+G GM EE + Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHARRIDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 89 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDGQIYSIAFENGDK 147 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--F 184 + ++F S + + ++ +++ A+ P V F Sbjct: 148 VQDLQVIGTCGKRNTGTSVHFW----PDVSFFDSPRFSVSRLSHLLKAKAVLCPGVEIVF 203 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERI 209 + + E + Sbjct: 204 KDLVNNTEQRWCYADGLTDYLMEAV 228 >gi|238782858|ref|ZP_04626887.1| DNA topoisomerase 4 subunit B [Yersinia bercovieri ATCC 43970] gi|238716281|gb|EEQ08264.1| DNA topoisomerase 4 subunit B [Yersinia bercovieri ATCC 43970] Length = 631 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 69/205 (33%), Gaps = 23/205 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + R++ ++ ++ D+G GM EE + Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHARRIDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 89 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDGQIYSIAFENGDK 147 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--F 184 + ++F S + + ++ +++ A+ P V F Sbjct: 148 VQDLQVIGTCGKRNTGTSVHFW----PDVSFFDSPRFSVSRLSHLLKAKAVLCPGVEIVF 203 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERI 209 + + E + Sbjct: 204 KDLVNNTEQRWCYADGLTDYLMEAV 228 >gi|282878061|ref|ZP_06286866.1| histidine kinase [Prevotella buccalis ATCC 35310] gi|281299801|gb|EFA92165.1| histidine kinase [Prevotella buccalis ATCC 35310] Length = 390 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 8/60 (13%) Query: 26 AIKELIENSLDA-----ESSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 I+ L +N++DA R+ + GK +++D G G+ ++I + T+K Sbjct: 291 VIENLCKNAVDAMGGEHG--RITIRVQDAVGKVVVEVSDTGKGIRKKDIRNVFRPGFTTK 348 >gi|322419000|ref|YP_004198223.1| multi-sensor signal transduction histidine kinase [Geobacter sp. M18] gi|320125387|gb|ADW12947.1| multi-sensor signal transduction histidine kinase [Geobacter sp. M18] Length = 586 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 11/62 (17%) Query: 22 RPSIAIKELIENSLDAESS------RVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQR 74 R + L+EN++ R++ G + DNG G+ +++P +R Sbjct: 475 RLDQVLINLLENAI----KYSGQGGRIQVEAAEEGEMVRVSVRDNGIGIPEKDLPRLFER 530 Query: 75 HC 76 Sbjct: 531 FY 532 >gi|225575706|ref|ZP_03784316.1| hypothetical protein RUMHYD_03799 [Blautia hydrogenotrophica DSM 10507] gi|225037086|gb|EEG47332.1| hypothetical protein RUMHYD_03799 [Blautia hydrogenotrophica DSM 10507] Length = 382 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 12/91 (13%) Query: 14 IAAGEIIERPSIAIKELIENSL---DAESSRVETVIAGGG-KSFFQITDNGFGMTSEEIP 69 IA GE I R I +I NS+ D + ++ + G +I DNG G+ ++++ Sbjct: 263 IADGEQIRR---VIHNIISNSIKYMDKKKGIIQIRVKDVGDFIQIEIEDNGKGIAAKDLT 319 Query: 70 MAVQRHCTSKISDDFSNIHTFGFRGEALPSI 100 R D S + G G L SI Sbjct: 320 NIFDRFY----RTDVSRNSSKGGSGIGL-SI 345 >gi|161897998|gb|ABX80108.1| DNA gyrase subunit B [Streptomyces azureus] Length = 482 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A + ++ I A GG ++ DNG G+ + Sbjct: 16 VQEVVDNSVDEALAGYADTIDVTILADGG---VRVVDNGRGIPVD 57 >gi|21228521|ref|NP_634443.1| DNA gyrase subunit B [Methanosarcina mazei Go1] gi|20907008|gb|AAM32115.1| DNA gyrase, subunit B [Methanosarcina mazei Go1] Length = 634 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A S ++ I G + DNG G+ + Sbjct: 41 VYEVVDNSIDEALAGFCSEIDVTINPNG--SVTVIDNGRGIPID 82 >gi|323137236|ref|ZP_08072315.1| DNA gyrase, B subunit [Methylocystis sp. ATCC 49242] gi|322397594|gb|EFY00117.1| DNA gyrase, B subunit [Methylocystis sp. ATCC 49242] Length = 810 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A ++RV + G +TDNG G+ ++ Sbjct: 48 VYEVVDNAIDEALAGHATRVTVTLNADG--SCSVTDNGRGIPTD 89 >gi|291525160|emb|CBK90747.1| Signal transduction histidine kinase [Eubacterium rectale DSM 17629] Length = 476 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 30 LIENSLDAESSRVET--VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 LI+N++ + SS+V+ + ++DNG G+ E+I + Sbjct: 373 LIDNAVKSGSSKVDVSGRLISHSIYRIAVSDNGRGIPPEDIERITEAFY 421 >gi|163746415|ref|ZP_02153773.1| C4-dicarboxylate transport sensor protein dctB [Oceanibulbus indolifex HEL-45] gi|161380300|gb|EDQ04711.1| C4-dicarboxylate transport sensor protein dctB [Oceanibulbus indolifex HEL-45] Length = 575 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 10/56 (17%) Query: 30 LIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N+LDA ++ V+ +++ G + + DNG G+ E++ + T+K Sbjct: 471 LLRNALDA--TKSERNPQVDIILSAGETATLTVRDNGPGI--EDLDALFEPFYTTK 522 >gi|85373891|ref|YP_457953.1| sensory transduction histidine kinase [Erythrobacter litoralis HTCC2594] gi|84786974|gb|ABC63156.1| sensory transduction histidine kinase [Erythrobacter litoralis HTCC2594] Length = 701 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 12/60 (20%) Query: 21 ERPSIAIKELIENSLDAESSR----VETVIAGGGK-SFFQITDNGFGMTSEEIPMAVQRH 75 E A+ L++N++DA S V ++ G +I D+G GM E RH Sbjct: 583 ECLEQAVVHLVQNAIDA--SDPGMPVSVDVSSDGLHGKIEIVDSGCGMDPE-----FVRH 635 >gi|152966260|ref|YP_001362044.1| histidine kinase [Kineococcus radiotolerans SRS30216] gi|151360777|gb|ABS03780.1| histidine kinase [Kineococcus radiotolerans SRS30216] Length = 542 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 11/60 (18%) Query: 30 LIENSLDAES------SRVETVI----AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N+LDA + RV + GG ++ DNG G+ E +P + T+K Sbjct: 427 LLDNALDALAETPEREGRVIVRVGPDTLEGGV-VVEVIDNGPGIDPEVLPRIFEPFVTTK 485 >gi|113477398|ref|YP_723459.1| DNA gyrase subunit B [Trichodesmium erythraeum IMS101] gi|110168446|gb|ABG52986.1| DNA gyrase subunit B [Trichodesmium erythraeum IMS101] Length = 891 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E + G ++TD+G G+ + Sbjct: 40 VYEVVDNSIDEALAGYCTHIEVDLNKDG--SVKVTDDGRGIPVD 81 >gi|325275335|ref|ZP_08141286.1| DNA gyrase subunit B [Pseudomonas sp. TJI-51] gi|324099526|gb|EGB97421.1| DNA gyrase subunit B [Pseudomonas sp. TJI-51] Length = 806 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 70/247 (28%), Gaps = 25/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDITVIIHPD--ESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+S L L R + + V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKLVLTVRRSG--KIWEQTYVHGVPQAPMAV 158 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 + T K+ +++ IR ++ V +S + Sbjct: 159 VGDSETT----GTHIHFKPSAETFKNIHFSWDILAKRIRELSFLNSGVGILLKDERSGKE 214 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 + F G + + N + G +N F Sbjct: 215 E--FFKYEGGLRAFVEYLNTNKTPVNNQVFHFNVQREDGVGVEVALQWNDSFNENLLCFT 272 Query: 255 NGRTVQD 261 N +D Sbjct: 273 NNIPQRD 279 >gi|269124283|ref|YP_003297653.1| DNA gyrase subunit B [Thermomonospora curvata DSM 43183] gi|268309241|gb|ACY95615.1| DNA gyrase, B subunit [Thermomonospora curvata DSM 43183] Length = 649 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A + +E + A GG ++ DNG G+ +E P Sbjct: 37 VYEIVDNSVDEALAGYADTIEVTLLADGG---VRVADNGRGIPVDEHP 81 >gi|237809291|ref|YP_002893731.1| signal transduction histidine kinase regulating citrate/malate metabolism [Tolumonas auensis DSM 9187] gi|237501552|gb|ACQ94145.1| signal transduction histidine kinase regulating citrate/malate metabolism [Tolumonas auensis DSM 9187] Length = 536 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 7/56 (12%) Query: 30 LIENSLDA-----ESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+EN++DA + + + + G F + DNG G+ E IP +R ++K Sbjct: 434 LLENAIDALEGVPDPT-ITVALDYEEGSLFCVVKDNGKGIPPEVIPHIFERGFSTK 488 >gi|152994030|ref|YP_001359751.1| hypothetical protein SUN_2460 [Sulfurovum sp. NBC37-1] gi|151425891|dbj|BAF73394.1| hypothetical protein [Sulfurovum sp. NBC37-1] Length = 537 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 14/68 (20%) Query: 28 KELIE-------NSLDA---ESS---RVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQ 73 KELI+ N++D +S+ ++E + GK+ I DNG G+ +EI + Sbjct: 424 KELIQVILIILNNAMDNFKIKSTSDPKIEISVESHQGKALLSIRDNGGGIEEKEIDRIFE 483 Query: 74 RHCTSKIS 81 + T+K Sbjct: 484 PYYTTKFK 491 >gi|23978214|dbj|BAC21106.1| DNA gyrase B subunit [Oscillatoria agardhii] Length = 396 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A + +E G +TD+G G+ + Sbjct: 10 VYEVVDNAIDEALAGYCTHIEIDFNANG--SVTVTDDGRGIPVD 51 >gi|319761821|ref|YP_004125758.1| DNA topoisomerase (ATP-hydrolyzing) [Alicycliphilus denitrificans BC] gi|330826319|ref|YP_004389622.1| DNA topoisomerase [Alicycliphilus denitrificans K601] gi|317116382|gb|ADU98870.1| DNA topoisomerase (ATP-hydrolyzing) [Alicycliphilus denitrificans BC] gi|329311691|gb|AEB86106.1| DNA topoisomerase (ATP-hydrolyzing) [Alicycliphilus denitrificans K601] Length = 658 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 74/216 (34%), Gaps = 31/216 (14%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 + P ++E+++N+ D A +++ + G + D+G G+ EE + Sbjct: 36 DNPLHIVQEVLDNAADEALAGYGKKIKVTLHEDG--SVSVEDDGRGIPFGLHPEEGAPVV 93 Query: 69 PMAVQR-HCTSKISDDFSNIHTF--GFRGEALPSIGAVS-HLTLMSRPPQN----NTGAQ 120 + R H K ++F G G + A+S L + + A Sbjct: 94 ELVFTRLHAGGKFDKGQGGAYSFSGGLHGVGVSVTNALSTRLEVSTHREGQIARLAFAAG 153 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + GT V V + +S Q+ +T ++R A+ P Sbjct: 154 DVAEPLLARPLAAGERRQGTTVRVW-------PDAKYFESAQLPMGELTHLLRSKAVLMP 206 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGED 216 VS + K+ + G + ++Q + D Sbjct: 207 GVSVSLVNEKTRDQQ--AWQYKGGLADYLAQSLPAD 240 >gi|297160224|gb|ADI09936.1| putative two-component sensor [Streptomyces bingchenggensis BCW-1] Length = 573 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 9/70 (12%) Query: 19 IIE--RPSIAIKELIENSLDAESSR------VETVIA-GGGKSFFQITDNGFGMTSEEIP 69 +++ + LI+N+LDA +S+ +E + G + +++DNG G+ E Sbjct: 412 VVDPRDLVTVLGNLIDNALDAVASQPRPDPFIEVELRAEGTTAVLRVSDNGPGVPPEMRE 471 Query: 70 MAVQRHCTSK 79 ++K Sbjct: 472 QIFAEGWSTK 481 >gi|290968148|ref|ZP_06559693.1| DNA gyrase, B subunit [Megasphaera genomosp. type_1 str. 28L] gi|290781823|gb|EFD94406.1| DNA gyrase, B subunit [Megasphaera genomosp. type_1 str. 28L] Length = 640 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 79/249 (31%), Gaps = 33/249 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + +E I + ++DNG G+ + + Sbjct: 43 VYEVVDNSVDEALAGFCTHIEVTIEAD--NSITVSDNGRGIPVA-MHKVGKPAVEVVLTV 99 Query: 75 -HCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRP 133 H K D I + G G I V+ L++ + + IS R Sbjct: 100 LHAGGKFGGDGYPI-SGGLHGVG---ISVVNALSIQT-----EVKVKRDNYLWDISFARG 150 Query: 134 VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDV------IRRMAIAYPKVSFTFS 187 + T + ++F ++ +++ D +R +A + T + Sbjct: 151 ITEKKLTKTRALEPGEETGTTVHFKPDPEIFPDVVYDFDTLKTRLRELAFLNKGLHITLT 210 Query: 188 TIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNA 247 + + + + G + + + + + + +N G + Sbjct: 211 DNREHNKQEVYCYEGG-LISFVQFLNENKQAVHPTVIPLDGEKNQVMVDIA-MQYNDGYS 268 Query: 248 NQFYVFING 256 F+N Sbjct: 269 ENILTFVND 277 >gi|283853813|ref|ZP_06371035.1| conserved hypothetical protein [Desulfovibrio sp. FW1012B] gi|283570800|gb|EFC18838.1| conserved hypothetical protein [Desulfovibrio sp. FW1012B] Length = 251 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 12/60 (20%) Query: 20 IERPSIA-----IKELIENSLDAESSRVETVI--AGGG-----KSFFQITDNGFGMTSEE 67 + R + E + NSL A ++ + I G +++DNG G E Sbjct: 9 VHRLHGVNVLDTVVEAVANSLHAGATNISIAIGYQDGTDSKKYIRSIEVSDNGAGFHIEN 68 >gi|217962265|ref|YP_002340835.1| putative sensor histidine kinase [Bacillus cereus AH187] gi|222098247|ref|YP_002532304.1| sensor histidine kinase [Bacillus cereus Q1] gi|217062924|gb|ACJ77174.1| putative sensor histidine kinase [Bacillus cereus AH187] gi|221242305|gb|ACM15015.1| sensor histidine kinase [Bacillus cereus Q1] Length = 406 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ ++IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKDKIPKLNEAFYTTK 365 >gi|157368358|ref|YP_001476347.1| hypothetical protein Spro_0109 [Serratia proteamaculans 568] gi|157320122|gb|ABV39219.1| conserved hypothetical protein [Serratia proteamaculans 568] Length = 672 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 63/499 (12%), Positives = 154/499 (30%), Gaps = 58/499 (11%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIA---GGGKSFFQITD 58 KI + I N++ A +P A+ E I N DA++S+V G + I+D Sbjct: 10 KIEVNDKGIRNRLKA----IKPFNAMSEYIWNGFDAKASQVCIDYKVDVLGSVTEITISD 65 Query: 59 NGFGMTSEEIPMAVQRHCTS-KISDDFSNIHTF--GFRGEALPSIGAVSHLTLMSRPPQN 115 +G G+ E+ + +S K D +++ + G G + LT + + Sbjct: 66 DGSGINCTELNRKFKPFLSSEKRIDSENSLMSLVHGKNG--------LGRLTFF-KFARK 116 Query: 116 NTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVE--TNLITDV-- 171 + S + D F + +KS + D+ Sbjct: 117 AIWYTTYKEKNEYYSSEITVSDES-----LDNFSNTDIIKSKVKSCGTSVGFYNVFDISG 171 Query: 172 IRRMAIAYP----KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEK 227 + P + S+ K+ + ++ + + I F +E + Sbjct: 172 FYMESTLEPFLEREFSWFLYLTKNKNFSLSMNGKDILYNNLIKDSDTIKFNFEGIEFTIE 231 Query: 228 SNEITLQ--GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVV 285 + + F +++ Y + ++ + Sbjct: 232 YVRWSCKLNNQASRMYFLTPDSDFKYSITTLLNNKSDSFHHSVYVHSSFF---------- 281 Query: 286 LLLEIDPRQVDVNVHPAKSYIRFRN-PTIIRNFIIQSIQKAINKKGISTSSVLSKKMISS 344 + ++ + + + +++ I + K SK+++SS Sbjct: 282 -------ENFVASKDSNQNDFFSNDTNSEVFKELVKKINSFLRIKRKPFLIEFSKELVSS 334 Query: 345 FHQDNAPKTHLPKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHY 404 + K P+Y + N E + ++ R + L + + N P ++ Sbjct: 335 YEA----KGVFPEY--NHRNRWEIMKAEDLREAVQQLYQIEPKFFKSLNKPQQKILVRML 388 Query: 405 QLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIID 464 I ++ + I + L ++ E+L + + ++ + + + Sbjct: 389 SFIIDGGEVDSLFDIVDSVISLSSEERDRFSEQLKVTHLSSILKTIELITDRYKSVQEFK 448 Query: 465 LLEGECALIMEHDEDLHRL 483 L + ++ L ++ Sbjct: 449 KLVFDPSMYAGEVPHLQKM 467 >gi|85710860|ref|ZP_01041921.1| putative two-component system sensor histidine kinase, putative heat shock protein [Idiomarina baltica OS145] gi|85695264|gb|EAQ33201.1| putative two-component system sensor histidine kinase, putative heat shock protein [Idiomarina baltica OS145] Length = 737 Score = 46.6 bits (109), Expect = 0.012, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 7/54 (12%) Query: 20 IERPSIAIKELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEI 68 I P AI EL++NS DA+S VE I GK + D G GMT + I Sbjct: 19 ISGPEAAIIELVKNSYDADSPSVEISIDPPSESDSGK--IIVKDFGHGMTYDNI 70 >gi|326486756|gb|ADZ76421.1| DNA gyrase subunit B [Bacillus subtilis] Length = 588 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I + + DNG G+ Sbjct: 14 EIVDNSIDEALAGYCTDINIQIEKD--NSITVVDNGRGIP 51 >gi|146338768|ref|YP_001203816.1| sensor histidine kinase [Bradyrhizobium sp. ORS278] gi|146191574|emb|CAL75579.1| putative sensor histidine kinase with a PAS domain [Bradyrhizobium sp. ORS278] Length = 454 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 9/64 (14%) Query: 23 PSIAIKELIENSLDAESSRVE------TVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRH 75 I L+EN++DA R+ + G F++TDNG G+ + + + Sbjct: 350 LHQVIVNLVENAIDA--MRITEQPRLVVAASRQGNEIAFRVTDNGPGIDKDHLSRIFEPF 407 Query: 76 CTSK 79 T+K Sbjct: 408 FTTK 411 >gi|42561045|ref|NP_975496.1| DNA topoisomerase IV subunit B [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492542|emb|CAE77138.1| DNA TOPOISOMERASE IV SUBUNIT B [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301321176|gb|ADK69819.1| DNA topoisomerase IV, B subunit [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 643 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 23/40 (57%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A ++++ ++ + I+DNG G+ Sbjct: 43 EIVDNAIDEALAGYCTQIDVILEKD--NSITISDNGRGIP 80 >gi|16077074|ref|NP_387887.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. 168] gi|221307815|ref|ZP_03589662.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. 168] gi|221312137|ref|ZP_03593942.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317070|ref|ZP_03598364.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. JH642] gi|221321333|ref|ZP_03602627.1| DNA gyrase subunit B [Bacillus subtilis subsp. subtilis str. SMY] gi|321313673|ref|YP_004205960.1| DNA gyrase subunit B [Bacillus subtilis BSn5] gi|121887|sp|P05652|GYRB_BACSU RecName: Full=DNA gyrase subunit B gi|40018|emb|CAA26221.1| unnamed protein product [Bacillus subtilis] gi|467396|dbj|BAA05242.1| B subunit of DNA gyrase [Bacillus subtilis] gi|2632273|emb|CAB11782.1| DNA gyrase (subunit B) [Bacillus subtilis subsp. subtilis str. 168] gi|291482375|dbj|BAI83450.1| DNA gyrase subunit B [Bacillus subtilis subsp. natto BEST195] gi|320019947|gb|ADV94933.1| DNA gyrase subunit B [Bacillus subtilis BSn5] Length = 638 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I + + DNG G+ Sbjct: 44 EIVDNSIDEALAGYCTDINIQIEKD--NSITVVDNGRGIP 81 >gi|306825577|ref|ZP_07458916.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431938|gb|EFM34915.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 648 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +S ++ +I + + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFASHIQVLIEPD--NSITVVDDGRGIPVD 88 >gi|269792159|ref|YP_003317063.1| histidine kinase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099794|gb|ACZ18781.1| histidine kinase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 185 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 32 ENSLDAESSRVETVI-AGGGKS--FFQITDNGFGMTSEEIPMAVQRHCT 77 EN ++A + VE + A G ++ D+G GM+ E + AV T Sbjct: 14 ENGVNAGARTVELGLHADSGLDVLRIRVRDDGRGMSPEVVSRAVDPFYT 62 >gi|160932418|ref|ZP_02079808.1| hypothetical protein CLOLEP_01253 [Clostridium leptum DSM 753] gi|156868377|gb|EDO61749.1| hypothetical protein CLOLEP_01253 [Clostridium leptum DSM 753] Length = 646 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++N++D A +++ I G + DNG G+ Sbjct: 47 VYEIVDNAIDEALAGYCDKIDVRILPG--DIIVVEDNGRGIP 86 >gi|317063674|ref|ZP_07928159.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] gi|313689350|gb|EFS26185.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185] Length = 655 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 8/57 (14%) Query: 30 LIENSLDAE-SSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LIEN++DA + + + F I DNG G++ E +P T+K Sbjct: 558 LIENAIDAFLADKEDNLIQISISTTEDSLRFL-IEDNGVGISEEALPYIFDPFYTTK 613 >gi|220918121|ref|YP_002493425.1| DNA topoisomerase VI, B subunit [Anaeromyxobacter dehalogenans 2CP-1] gi|219955975|gb|ACL66359.1| DNA topoisomerase VI, B subunit [Anaeromyxobacter dehalogenans 2CP-1] Length = 697 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 58/194 (29%), Gaps = 48/194 (24%) Query: 27 IKELIENSLDA--ESS---RVETVIAGGGKS--------------FFQITDNGFGMTSEE 67 IKE ++NSLDA E+ + + G + + DNG G+ + Sbjct: 127 IKEAVDNSLDACEEAGILPEITIEVRDLGLNEQGEGELTKGEGRFVVVVEDNGPGIVKAQ 186 Query: 68 IPMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVSHLT------LMSRPPQNNTG-- 118 P + SK + G +G + + LT ++SR + Sbjct: 187 APKIFGKLLYGSKFH---RLKQSRGQQGIGISAAAMYGQLTTGQPIRMISRTGKGKPAFG 243 Query: 119 ------AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 + GT VE+ + + Q + + Sbjct: 244 LEIQIDTRKNNPVVTAERQLDDWHEHGTRVELEIV-----------ANWQQGQRFVNRYV 292 Query: 173 RRMAIAYPKVSFTF 186 A++ P +F + Sbjct: 293 EHTALSNPHAAFHY 306 >gi|149182285|ref|ZP_01860764.1| DNA gyrase subunit B [Bacillus sp. SG-1] gi|148849977|gb|EDL64148.1| DNA gyrase subunit B [Bacillus sp. SG-1] Length = 638 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A S ++ I + + DNG G+ Sbjct: 45 EIVDNSIDEALAGYCSEIKVSIEKD--NSITVQDNGRGIP 82 >gi|300865369|ref|ZP_07110180.1| DNA gyrase subunit B [Oscillatoria sp. PCC 6506] gi|300336672|emb|CBN55330.1| DNA gyrase subunit B [Oscillatoria sp. PCC 6506] Length = 646 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + +E I G +TD+G G+ Sbjct: 39 VYEVVDNSIDEALAGHCTHIEVDINADG--SVTVTDDGRGIP 78 >gi|282880548|ref|ZP_06289255.1| DNA topoisomerase IV subunit B [Prevotella timonensis CRIS 5C-B1] gi|281305651|gb|EFA97704.1| DNA topoisomerase IV subunit B [Prevotella timonensis CRIS 5C-B1] Length = 670 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 99/339 (29%), Gaps = 38/339 (11%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT-SKI 80 +KE+++NS+D A R+E I ++ D G G+ ++ AV T K Sbjct: 69 LKEVLDNSIDEFKMKAG-DRIEIDIEDN--LRVRVRDYGRGIPQGKLVEAVSVLNTGGKY 125 Query: 81 SDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPG 139 + G G + ++ A+S H + S K + G Sbjct: 126 DSKAFK-KSVGLNGVGIKAVNALSAHFEVESFREGKVRKLTFEKGDMKTDKTTKTSDESG 184 Query: 140 TIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF----TFSTIKSNRYK 195 T + K+ +++ ++R ++ ++ Sbjct: 185 TYIYFE-------PDDTLFKNYSFHDDIVETMLRNYTYLNAGLTIMYNGRRIKSRNGLED 237 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + + + I +IGED N+ E F Sbjct: 238 LLNDNMTTDGLYPIIHMIGEDIEIAFTHTNQYGEEYYS---FVNGQHTTQGGTHQSAFKE 294 Query: 256 G------RTVQDKFILSTIRTAYAETIPLG-RYPVVVLLLEIDPRQVDVNVHPAKSYIRF 308 + + IR I + PV +I + P I Sbjct: 295 HIAKTIKEFFDKNYEYTDIRNGIVGAIAINVEEPVFESQTKIKLG--STQMAPGGETIN- 351 Query: 309 RNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 + +FI + + ++ + +L K+ SS H+ Sbjct: 352 ---KYVGDFIKREVDNYLHIHKEDCADILEAKIKSSEHE 387 >gi|258646055|ref|ZP_05733524.1| DNA gyrase, B subunit [Dialister invisus DSM 15470] gi|260403425|gb|EEW96972.1| DNA gyrase, B subunit [Dialister invisus DSM 15470] Length = 649 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + +E + G ITDNG G+ Sbjct: 55 VYEVVDNSIDEALAGFCTHIEVTLNDDG--SCTITDNGRGIP 94 >gi|167772592|ref|ZP_02444645.1| hypothetical protein ANACOL_03971 [Anaerotruncus colihominis DSM 17241] gi|167665070|gb|EDS09200.1| hypothetical protein ANACOL_03971 [Anaerotruncus colihominis DSM 17241] Length = 183 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Query: 32 ENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCT 77 +NS+ A + +E ++ +S + D+G GMT E+ T Sbjct: 13 QNSVRAGARLIEIMVDEQPESDIMTITVADDGCGMTPEQAAHVTDPFFT 61 >gi|291461019|ref|ZP_06026484.2| DNA gyrase, B subunit [Fusobacterium periodonticum ATCC 33693] gi|291379423|gb|EFE86941.1| DNA gyrase, B subunit [Fusobacterium periodonticum ATCC 33693] Length = 639 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 79/206 (38%), Gaps = 29/206 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE----------EIPMAVQR 74 E+++NS+D A ++++ I ++ DNG G+ ++ EI + V Sbjct: 43 EIVDNSVDEALAGYCNKIDVKILPDNI--IEVVDNGRGIPTDIHPKYGKSALEIVLTVL- 99 Query: 75 HCTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRP 133 H K +D + + G G + + A+S L + R N + + Sbjct: 100 HAGGKFENDNYKV-SGGLHGVGVSVVNALSEWLEVEVRKEGNVYYQKYYRGKPEEDVKII 158 Query: 134 VAM---NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 + GT V + A + ++ +++ ++ +A ++ T S ++ Sbjct: 159 GSCEESEHGTTVRFK-------ADRDIFETLIYNYFTLSNRLKELAYLNRGLTITLSDLR 211 Query: 191 SNRYKMNFQSTNGNFPERISQVIGED 216 K +G + +++++ E+ Sbjct: 212 KEEKKEETYKFDGGILDFLNEIVKEE 237 >gi|238750922|ref|ZP_04612419.1| DNA topoisomerase 4 subunit B [Yersinia rohdei ATCC 43380] gi|238710836|gb|EEQ03057.1| DNA topoisomerase 4 subunit B [Yersinia rohdei ATCC 43380] Length = 631 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 69/205 (33%), Gaps = 23/205 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + R++ ++ ++ D+G GM EE + Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHARRIDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 89 ELILCRLHAGGKFSNKSYQ-FSGGLHGVGISVVNALSKRVEVTVRRDSQIYSIAFENGDK 147 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--F 184 + ++F S + + ++ +++ A+ P V F Sbjct: 148 VQDLQVIGTCGKRNTGTSVHFW----PDVSFFDSPRFSVSRLSHLLKAKAVLCPGVEIIF 203 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERI 209 + + E + Sbjct: 204 KDKVNNTEQRWCYADGLTDYLMEAV 228 >gi|170780469|ref|YP_001708801.1| DNA gyrase subunit B [Clavibacter michiganensis subsp. sepedonicus] gi|169155037|emb|CAQ00133.1| DNA gyrase subunit B [Clavibacter michiganensis subsp. sepedonicus] Length = 664 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 25/45 (55%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +S ++ + GG ++ D+G G+ + Sbjct: 56 VSEIVDNSVDEALAGFASDIQITMRKDGG---IRVVDDGRGIPVD 97 >gi|154492139|ref|ZP_02031765.1| hypothetical protein PARMER_01771 [Parabacteroides merdae ATCC 43184] gi|154087364|gb|EDN86409.1| hypothetical protein PARMER_01771 [Parabacteroides merdae ATCC 43184] Length = 175 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Query: 33 NSLDAESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 NS+ A +S + + + +ITDNG GM +E T Sbjct: 14 NSIRANASEIGLSVEEQDTRIVIRITDNGSGMDAETARRVTNPFYT 59 >gi|148271184|ref|YP_001220745.1| DNA gyrase subunit B [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829114|emb|CAN00011.1| DNA gyrase subunit B [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 681 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 25/45 (55%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +S ++ + GG ++ D+G G+ + Sbjct: 73 VSEIVDNSVDEALAGFASDIQITMRKDGG---IRVVDDGRGIPVD 114 >gi|313681084|ref|YP_004058823.1| integral membrane sensor signal transduction histidine kinase [Oceanithermus profundus DSM 14977] gi|313153799|gb|ADR37650.1| integral membrane sensor signal transduction histidine kinase [Oceanithermus profundus DSM 14977] Length = 419 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 8/69 (11%) Query: 15 AAGEII---ERPSIAIKELIENSLDAESSR---VETVI-AGGGKSFFQITDNGFGMTSEE 67 AA E++ +R ++ L+ N++ A + R V + G+++ ++ D+G G+ E Sbjct: 305 AAPEVLGDPDRLIQLLRNLVANAVRA-AGRPEGVRVTVGEDDGRAWVEVADDGPGIDPEV 363 Query: 68 IPMAVQRHC 76 +P +R Sbjct: 364 LPHLFERFA 372 >gi|300857422|ref|YP_003782405.1| DNA gyrase subunit B [Corynebacterium pseudotuberculosis FRC41] gi|300684876|gb|ADK27798.1| DNA gyrase subunit B [Corynebacterium pseudotuberculosis FRC41] gi|302205162|gb|ADL09504.1| DNA gyrase subunit B [Corynebacterium pseudotuberculosis C231] gi|302329720|gb|ADL19914.1| DNA gyrase subunit B [Corynebacterium pseudotuberculosis 1002] gi|308275403|gb|ADO25302.1| DNA gyrase subunit B [Corynebacterium pseudotuberculosis I19] Length = 681 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 69/204 (33%), Gaps = 39/204 (19%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQR--------- 74 E+++NS+D A ++ V+ + GG ++ DNG G+ ++ + Sbjct: 44 EVVDNSVDEAMAGHATHVDVTLLEDGG---VEVVDNGRGIPV-DMHASGAPTVQVVMTQL 99 Query: 75 HCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQN--NTGAQIAISGEKISSVR 132 H K D + + G G + + A+S +R + G + Sbjct: 100 HAGGKFDSDSYAV-SGGLHGVGISVVNALS-----TRVEADIKLHGKHWYQNFSNAVPDE 153 Query: 133 PVAM----NPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPK--VSFTF 186 V GT + ++ + ++I ++ MA +S T Sbjct: 154 LVQGGNARGTGTTIRFW-------PDAEIFETTTFKFDIIARRLQEMAFLNKGLTLSLTD 206 Query: 187 STIKSNRYKMNFQSTNGNFPERIS 210 + ++ + G+ E +S Sbjct: 207 KRVSDEELELEAIADEGDTAENVS 230 >gi|284990756|ref|YP_003409310.1| signal transduction histidine kinase regulating citrate/malate metabolism [Geodermatophilus obscurus DSM 43160] gi|284064001|gb|ADB74939.1| signal transduction histidine kinase regulating citrate/malate metabolism [Geodermatophilus obscurus DSM 43160] Length = 542 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 32/87 (36%) Query: 18 EIIERPSIAIKE--------------LIENSLDAE-----------SSRVETVIAGGGKS 52 E+ P+ A+ E L++N++DA ++ V GG+ Sbjct: 411 EV--DPATAVGETGIPGGDLVTIVGNLLDNAIDAALAGEPPREVQFAAEV-----DGGRL 463 Query: 53 FFQITDNGFGMTSEEIPMAVQRHCTSK 79 ++ D G G+ E++P +R ++K Sbjct: 464 QIRVEDTGPGVREEDLPRLFERGWSTK 490 >gi|253991001|ref|YP_003042357.1| DNA topoisomerase IV subunit B [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782451|emb|CAQ85615.1| topoisomerase IV subunit B [Photorhabdus asymbiotica] Length = 631 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 77/212 (36%), Gaps = 29/212 (13%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + +E ++ ++ D+G GM EE + Sbjct: 31 TRPNHLAQEVIDNSVDEALAGHAKHIEVILHSD--QSLEVIDDGRGMPVDIHPEEGVSAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAIS 124 + + R H K S+ + G G + + A+S + + R + Sbjct: 89 ELILSRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRIEVTVRRSSQVYQIAFENGDK 147 Query: 125 GEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 ++++ + N GT V +F S + + +T +++ A+ P V Sbjct: 148 VQELAVIGSCGKRNTGTSVHFW-------PDESFFDSPRFSASRLTHLLKAKAVLCPGVE 200 Query: 184 --FTFSTIKSNRYKMNFQSTNGNFPERISQVI 213 F + + ++ ++ Sbjct: 201 IVFKDKINDTEQKWCYADGLTDYLMAAVNGLM 232 >gi|190571487|ref|YP_001975845.1| DNA gyrase, B subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018889|ref|ZP_03334697.1| DNA gyrase, B subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357759|emb|CAQ55211.1| DNA gyrase, B subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995840|gb|EEB56480.1| DNA gyrase, B subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 790 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A S++E I G +TDNG G+ ++ Sbjct: 40 VYEVVDNAIDESLAGYCSKIEVSINEDG--SVSVTDNGRGIPTD 81 >gi|29828972|ref|NP_823606.1| two-component system sensor kinase [Streptomyces avermitilis MA-4680] gi|29606077|dbj|BAC70141.1| putative two-component system sensor kinase [Streptomyces avermitilis MA-4680] Length = 575 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Query: 23 PSIAIKELIENSLDAESS----RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCT 77 + L++N+LDA + RVE + G++ ++ D G G+ E + T Sbjct: 427 LVTVVGNLVDNALDAVAGTPHARVEVELRAEGRTTVLRVRDTGPGIPVERRELIFTDGWT 486 Query: 78 SK 79 +K Sbjct: 487 TK 488 >gi|260771893|ref|ZP_05880811.1| topoisomerase IV subunit B [Vibrio metschnikovii CIP 69.14] gi|260613185|gb|EEX38386.1| topoisomerase IV subunit B [Vibrio metschnikovii CIP 69.14] Length = 643 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 74/208 (35%), Gaps = 29/208 (13%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGM-----TSEEIP-- 69 RP+ +E+I+NS+D A +++V+ ++ ++ D+G GM E + Sbjct: 46 TRPNHLGQEVIDNSVDEALAGYATKVQVILHAD--QSLEVIDDGRGMPVDIHPEENVSGV 103 Query: 70 --MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAIS 124 + + H K S+ + G G + + A+S + + R + + Sbjct: 104 ELILCKLHAGGKFSNKSYQ-FSGGLHGVGISVVNALSKRVEVTVRRDGQVYDIAFEHGEK 162 Query: 125 GEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP--K 181 ++ N GT V P + S + + + +R A+ P + Sbjct: 163 VSDLTVTGTCGRRNRGTSVHF------WPEAR-YFDSANFSVSRLVNNLRAKAVLCPGLE 215 Query: 182 VSFTFSTIKSNRYKMNFQSTNGNFPERI 209 ++FT + + E + Sbjct: 216 ITFTDKVNNNEYRWLYEDGLKDYLAEGV 243 >gi|194339113|gb|ACF49472.1| GyrB [Amycolatopsis taiwanensis] Length = 448 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 I+E+++NS+D A +++VE + A GG ++ D+G G+ EE P Sbjct: 3 IQEVVDNSVDEAMAGFATKVEVTLLADGG---VRVVDDGRGIPVEEHP 47 >gi|119773418|ref|YP_926158.1| hypothetical protein Sama_0277 [Shewanella amazonensis SB2B] gi|119765918|gb|ABL98488.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 483 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 24 SIAIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMA 71 + A+ ++I+NS+ A++SRV+ KS +I DNG GM ++ + A Sbjct: 13 ASALADIIDNSIAAKASRVDLNFTWQNEKSRIEILDNGSGMDAQGLDTA 61 >gi|118591525|ref|ZP_01548922.1| probable two-component sensor histidine kinase protein [Stappia aggregata IAM 12614] gi|118435853|gb|EAV42497.1| probable two-component sensor histidine kinase protein [Stappia aggregata IAM 12614] Length = 598 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 9/67 (13%) Query: 22 RPSIAIKELIENSLDA---ESSRV---ETVIA---GGGKSFFQITDNGFGMTSEEIPMAV 72 R + L+ N+LDA + + E + GG++ ++DNG G+ +E +P Sbjct: 481 RLEQVVINLLSNALDAVSGNALSLAGPEVRLELRQEGGEAVLTVSDNGPGIDAEVLPQIF 540 Query: 73 QRHCTSK 79 T+K Sbjct: 541 DPFFTTK 547 >gi|17232757|ref|NP_489305.1| DNA gyrase subunit B [Nostoc sp. PCC 7120] gi|17134404|dbj|BAB76964.1| DNA gyrase B subunit [Nostoc sp. PCC 7120] Length = 645 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ + Sbjct: 39 VYEVVDNSIDEALAGYCTHIEVEINADG--SVAVTDDGRGIPID 80 >gi|222823049|ref|YP_002574622.1| DNA gyrase, subunit B [Campylobacter lari RM2100] gi|222538270|gb|ACM63371.1| DNA gyrase, subunit B [Campylobacter lari RM2100] Length = 772 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 60/175 (34%), Gaps = 21/175 (12%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGM-----TSEEIP----MAVQRH 75 E+++NS+D A + I G ++DNG G+ +E +P + H Sbjct: 43 EVVDNSIDEAMAGFCDTINVEITTEG--SCIVSDNGRGIPVGMHPTENMPTLTVVLTVLH 100 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D + + G G + + A+S + + + S K++S Sbjct: 101 AGGKFDKDTYKV-SGGLHGVGVSVVNALSKKLVATVHRDGEI-YRQEFSEGKVTSDFETI 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 + + + + + ++ R +A PK++ F + Sbjct: 159 GTSKKTGTIIEFW----PDDQIFEITNFDYEILAKRFRELAYLNPKITINFKDNR 209 >gi|229158393|ref|ZP_04286456.1| Sensor histidine kinase [Bacillus cereus ATCC 4342] gi|228625071|gb|EEK81835.1| Sensor histidine kinase [Bacillus cereus ATCC 4342] Length = 395 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ E+IP + T+K Sbjct: 303 LIKNAIEAMSVGGTITIKVNVEDA--IIIQVKDEGCGIPKEKIPKLNEAFYTTK 354 >gi|226311028|ref|YP_002770922.1| two-component sensor histidine kinase [Brevibacillus brevis NBRC 100599] gi|226093976|dbj|BAH42418.1| two-component sensor histidine kinase [Brevibacillus brevis NBRC 100599] Length = 471 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 17/35 (48%) Query: 42 VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 ++ + G + +I DNG GM +E+ R+ Sbjct: 391 IKVSVEKGKHTLIRIEDNGKGMKEQELDRIFDRYY 425 >gi|153005351|ref|YP_001379676.1| histidine kinase [Anaeromyxobacter sp. Fw109-5] gi|152028924|gb|ABS26692.1| histidine kinase [Anaeromyxobacter sp. Fw109-5] Length = 626 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 5/54 (9%) Query: 30 LIENSLDAESS---RVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N++DA + RVE A GG+ +++D+G G+ E +P T+K Sbjct: 529 LLLNAVDA-ARPGGRVEVSTATAGGRIAVRVSDDGAGIAPEHLPRIFDPFFTTK 581 >gi|148979399|ref|ZP_01815505.1| DNA topoisomerase IV subunit B [Vibrionales bacterium SWAT-3] gi|145961835|gb|EDK27128.1| DNA topoisomerase IV subunit B [Vibrionales bacterium SWAT-3] Length = 626 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 79/208 (37%), Gaps = 29/208 (13%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EI 68 ERP+ +E+I+NS+D A + +++ V+ ++TD+G GM + + Sbjct: 30 ERPNHLAQEVIDNSVDEALAGHAKKIKVVLHAD--QSLEVTDDGRGMPVDIHPEKGISGV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAIS 124 + + + H K S++ + G G + + A+S + + R + + Sbjct: 88 ELILTKLHSGGKFSNNNYK-FSGGLHGVGISVVNALSKRVEVTVRREGQVHEIALEHGKA 146 Query: 125 GEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 +++ N GT V + S + T + + +R A+ P + Sbjct: 147 VTELTVTGTCGHRNSGTSVHFW-------PDPKYFDSSKFSTLRLINNLRAKAVLCPGLE 199 Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQ 211 TFS + + + +++ Sbjct: 200 ITFS--DKVNNEEHKWFYEDGLKDYLAE 225 >gi|332797100|ref|YP_004458600.1| DNA topoisomerase VI subunit B [Acidianus hospitalis W1] gi|332694835|gb|AEE94302.1| DNA topoisomerase VI, B subunit [Acidianus hospitalis W1] Length = 527 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 14/69 (20%) Query: 23 PSIAIKELIENSLDAESS-------RVETVIA----GGGKSFFQITDNGFGMTSEEIPMA 71 A++E++ENSLDA + ++ ++ + DNG G+ +P A Sbjct: 30 LYQALREMVENSLDA--TDVHEILPSIKIIMDLIDQDKQIYKLTVEDNGIGIPPHVVPDA 87 Query: 72 VQR-HCTSK 79 R +SK Sbjct: 88 FGRVLYSSK 96 >gi|326929998|ref|XP_003211140.1| PREDICTED: MORC family CW-type zinc finger protein 2-like [Meleagris gallopavo] Length = 1043 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVETVIA-----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ GG + D+G GM S E +Q ++K S + Sbjct: 51 ELVDNARDADATRIDIYTEHRENLRGGFMLCFL-DDGAGMDSNEAASVIQFGKSAKRSPE 109 Query: 84 FSNIHTFG 91 + I +G Sbjct: 110 STQIGQYG 117 >gi|294635768|ref|ZP_06714228.1| conserved hypothetical protein [Edwardsiella tarda ATCC 23685] gi|291090868|gb|EFE23429.1| conserved hypothetical protein [Edwardsiella tarda ATCC 23685] Length = 993 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 23/52 (44%) Query: 18 EIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 E I AI EL +N+ DA + +V I G I D+G GM E Sbjct: 23 EQIADCPTAISELWKNAYDAYARQVSLHIFDGDMKISAIVDDGHGMNRNEFE 74 >gi|117619870|ref|YP_854549.1| sensor histidine kinase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561277|gb|ABK38225.1| sensor histidine kinase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 665 Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 9/58 (15%) Query: 30 LIENSL-------DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 LI NS+ D + ++ + G+ +DNG G+ E +P TSK Sbjct: 563 LILNSINHGFDNWD-KPKKITIKVEQQGEELLIDYSDNGRGIPPEILPRIFDPFVTSK 619 >gi|257469430|ref|ZP_05633522.1| multi-sensor signal transduction histidine kinase [Fusobacterium ulcerans ATCC 49185] Length = 667 Score = 46.6 bits (109), Expect = 0.014, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 8/57 (14%) Query: 30 LIENSLDAE-SSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LIEN++DA + + + F I DNG G++ E +P T+K Sbjct: 570 LIENAIDAFLADKEDNLIQISISTTEDSLRFL-IEDNGVGISEEALPYIFDPFYTTK 625 >gi|222618645|gb|EEE54777.1| hypothetical protein OsJ_02172 [Oryza sativa Japonica Group] Length = 682 Score = 46.6 bits (109), Expect = 0.014, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 6/74 (8%) Query: 26 AIKELIENSLD---AESSRVET-VIAG--GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 AI EL++N++D ++ V G S I D+G GM E + + + K Sbjct: 159 AIAELLDNAIDEVNTGATFVRVNEFTNPRDGSSSLLIQDDGGGMDPEALRRCMSFGFSDK 218 Query: 80 ISDDFSNIHTFGFR 93 SD + GF+ Sbjct: 219 QSDALIGQYGNGFK 232 >gi|218188430|gb|EEC70857.1| hypothetical protein OsI_02368 [Oryza sativa Indica Group] Length = 648 Score = 46.6 bits (109), Expect = 0.014, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 6/74 (8%) Query: 26 AIKELIENSLD---AESSRVET-VIAG--GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 AI EL++N++D ++ V G S I D+G GM E + + + K Sbjct: 159 AIAELLDNAIDEVNTGATFVRVNEFTNPRDGSSSLLIQDDGGGMDPEALRRCMSFGFSDK 218 Query: 80 ISDDFSNIHTFGFR 93 SD + GF+ Sbjct: 219 QSDALIGQYGNGFK 232 >gi|152985037|ref|YP_001346288.1| PAS/PAC sensor signal transduction histidine kinase [Pseudomonas aeruginosa PA7] gi|150960195|gb|ABR82220.1| PAS/PAC sensor signal transduction histidine kinase [Pseudomonas aeruginosa PA7] Length = 763 Score = 46.6 bits (109), Expect = 0.014, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 9/59 (15%) Query: 30 LIENSLDA------ES-SRVET--VIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N+++A + SRV + GG + D G G+ ++++ TSK Sbjct: 653 LLRNAIEANREAHPGAPSRVVIGSRVEPGGLLCLWVRDEGPGVPADQLEHIFTPFHTSK 711 >gi|29840266|ref|NP_829372.1| DNA gyrase subunit B [Chlamydophila caviae GPIC] gi|29834614|gb|AAP05250.1| DNA gyrase, subunit B [Chlamydophila caviae GPIC] Length = 806 Score = 46.6 bits (109), Expect = 0.014, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 I + E+++NS+D A S + I GG I+DNG G+ Sbjct: 35 ITGLHHLVYEVVDNSIDEAMAGYCSEIYVRILEDGG---ITISDNGRGIP 81 >gi|326390355|ref|ZP_08211914.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus JW 200] gi|325993632|gb|EGD52065.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter ethanolicus JW 200] Length = 633 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 41 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 98 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 99 LHAGGKFNNDAYKVS 113 >gi|310781287|gb|ADP24119.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781289|gb|ADP24120.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 450 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 6 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 63 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 64 LHAGGKFNNDAYKVS 78 >gi|310781285|gb|ADP24118.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 397 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781283|gb|ADP24117.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 402 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 9 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 66 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 67 LHAGGKFNNDAYKVS 81 >gi|310781281|gb|ADP24116.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 393 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781277|gb|ADP24114.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781279|gb|ADP24115.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 398 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781267|gb|ADP24109.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781273|gb|ADP24112.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781275|gb|ADP24113.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 395 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 4 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 61 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 62 LHAGGKFNNDAYKVS 76 >gi|310781265|gb|ADP24108.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781269|gb|ADP24110.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781271|gb|ADP24111.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 397 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 4 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 61 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 62 LHAGGKFNNDAYKVS 76 >gi|310781263|gb|ADP24107.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 453 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 7 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 64 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 65 LHAGGKFNNDAYKVS 79 >gi|310781251|gb|ADP24101.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 396 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781249|gb|ADP24100.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781253|gb|ADP24102.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781255|gb|ADP24103.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781257|gb|ADP24104.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 393 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781245|gb|ADP24098.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781247|gb|ADP24099.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 397 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781239|gb|ADP24095.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781241|gb|ADP24096.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781243|gb|ADP24097.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781259|gb|ADP24105.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781261|gb|ADP24106.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 398 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781237|gb|ADP24094.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 395 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 4 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 61 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 62 LHAGGKFNNDAYKVS 76 >gi|310781235|gb|ADP24093.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 452 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781225|gb|ADP24088.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781229|gb|ADP24090.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781231|gb|ADP24091.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781233|gb|ADP24092.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 397 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 4 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 61 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 62 LHAGGKFNNDAYKVS 76 >gi|310781211|gb|ADP24081.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 397 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 6 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 63 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 64 LHAGGKFNNDAYKVS 78 >gi|310781203|gb|ADP24077.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 393 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781201|gb|ADP24076.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781205|gb|ADP24078.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781207|gb|ADP24079.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781215|gb|ADP24083.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781217|gb|ADP24084.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781219|gb|ADP24085.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781221|gb|ADP24086.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781223|gb|ADP24087.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 396 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781199|gb|ADP24075.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 451 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 6 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 63 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 64 LHAGGKFNNDAYKVS 78 >gi|310781193|gb|ADP24072.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781195|gb|ADP24073.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781197|gb|ADP24074.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 398 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781191|gb|ADP24071.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781209|gb|ADP24080.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781213|gb|ADP24082.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 395 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 4 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 61 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 62 LHAGGKFNNDAYKVS 76 >gi|310781189|gb|ADP24070.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 396 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 4 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 61 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 62 LHAGGKFNNDAYKVS 76 >gi|310781183|gb|ADP24067.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 396 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781179|gb|ADP24065.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781181|gb|ADP24066.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781185|gb|ADP24068.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781187|gb|ADP24069.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 396 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781177|gb|ADP24064.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 395 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 4 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 61 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 62 LHAGGKFNNDAYKVS 76 >gi|310781175|gb|ADP24063.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 445 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 6 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 63 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 64 LHAGGKFNNDAYKVS 78 >gi|310781173|gb|ADP24062.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 451 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 6 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 63 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 64 LHAGGKFNNDAYKVS 78 >gi|310781169|gb|ADP24060.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 455 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 8 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 65 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 66 LHAGGKFNNDAYKVS 80 >gi|310781167|gb|ADP24059.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 444 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781131|gb|ADP24041.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 453 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 6 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 63 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 64 LHAGGKFNNDAYKVS 78 >gi|310781129|gb|ADP24040.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 450 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781085|gb|ADP24018.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781087|gb|ADP24019.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781171|gb|ADP24061.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 445 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 6 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 63 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 64 LHAGGKFNNDAYKVS 78 >gi|310781081|gb|ADP24016.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 446 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 7 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 64 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 65 LHAGGKFNNDAYKVS 79 >gi|310781051|gb|ADP24001.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781053|gb|ADP24002.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 396 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310781043|gb|ADP23997.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 400 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 7 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 64 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 65 LHAGGKFNNDAYKVS 79 >gi|310781037|gb|ADP23994.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 396 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 4 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 61 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 62 LHAGGKFNNDAYKVS 76 >gi|310781035|gb|ADP23993.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781039|gb|ADP23995.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781041|gb|ADP23996.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 397 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 4 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 61 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 62 LHAGGKFNNDAYKVS 76 >gi|310781031|gb|ADP23991.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781045|gb|ADP23998.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781047|gb|ADP23999.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781049|gb|ADP24000.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781055|gb|ADP24003.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781057|gb|ADP24004.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781059|gb|ADP24005.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781061|gb|ADP24006.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781063|gb|ADP24007.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781065|gb|ADP24008.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781069|gb|ADP24010.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781071|gb|ADP24011.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781073|gb|ADP24012.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781075|gb|ADP24013.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 395 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 4 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 61 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 62 LHAGGKFNNDAYKVS 76 >gi|310781029|gb|ADP23990.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 393 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 4 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 61 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 62 LHAGGKFNNDAYKVS 76 >gi|310781011|gb|ADP23981.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781013|gb|ADP23982.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781015|gb|ADP23983.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781017|gb|ADP23984.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781023|gb|ADP23987.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 397 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 6 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 63 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 64 LHAGGKFNNDAYKVS 78 >gi|310781009|gb|ADP23980.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 402 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 9 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 66 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 67 LHAGGKFNNDAYKVS 81 >gi|310781005|gb|ADP23978.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 396 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 6 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 63 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 64 LHAGGKFNNDAYKVS 78 >gi|310780999|gb|ADP23975.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 400 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 9 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 66 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 67 LHAGGKFNNDAYKVS 81 >gi|310780997|gb|ADP23974.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 397 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 9 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 66 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 67 LHAGGKFNNDAYKVS 81 >gi|310780945|gb|ADP23948.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 375 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310780937|gb|ADP23944.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 453 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 6 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 63 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 64 LHAGGKFNNDAYKVS 78 >gi|310780929|gb|ADP23940.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780931|gb|ADP23941.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780933|gb|ADP23942.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780935|gb|ADP23943.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780969|gb|ADP23960.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780971|gb|ADP23961.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780973|gb|ADP23962.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780975|gb|ADP23963.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780977|gb|ADP23964.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780979|gb|ADP23965.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780981|gb|ADP23966.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780983|gb|ADP23967.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780985|gb|ADP23968.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780987|gb|ADP23969.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780989|gb|ADP23970.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780991|gb|ADP23971.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780993|gb|ADP23972.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780995|gb|ADP23973.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781019|gb|ADP23985.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781021|gb|ADP23986.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781025|gb|ADP23988.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781027|gb|ADP23989.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781077|gb|ADP24014.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781079|gb|ADP24015.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781089|gb|ADP24020.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781091|gb|ADP24021.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781093|gb|ADP24022.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781095|gb|ADP24023.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781097|gb|ADP24024.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781099|gb|ADP24025.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781101|gb|ADP24026.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781103|gb|ADP24027.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781105|gb|ADP24028.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781107|gb|ADP24029.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781109|gb|ADP24030.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781111|gb|ADP24031.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781113|gb|ADP24032.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781115|gb|ADP24033.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781117|gb|ADP24034.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781119|gb|ADP24035.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781121|gb|ADP24036.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781123|gb|ADP24037.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781125|gb|ADP24038.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781127|gb|ADP24039.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781145|gb|ADP24048.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781147|gb|ADP24049.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781149|gb|ADP24050.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781151|gb|ADP24051.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781153|gb|ADP24052.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781155|gb|ADP24053.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781159|gb|ADP24055.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781161|gb|ADP24056.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781163|gb|ADP24057.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781165|gb|ADP24058.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 396 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310780927|gb|ADP23939.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780967|gb|ADP23959.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781007|gb|ADP23979.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 395 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310780909|gb|ADP23930.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780911|gb|ADP23931.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780913|gb|ADP23932.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780915|gb|ADP23933.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780917|gb|ADP23934.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780919|gb|ADP23935.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780921|gb|ADP23936.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780923|gb|ADP23937.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780925|gb|ADP23938.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780949|gb|ADP23950.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780951|gb|ADP23951.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780953|gb|ADP23952.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780955|gb|ADP23953.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780957|gb|ADP23954.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780959|gb|ADP23955.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780961|gb|ADP23956.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780963|gb|ADP23957.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780965|gb|ADP23958.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781001|gb|ADP23976.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781003|gb|ADP23977.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 393 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310780907|gb|ADP23929.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781083|gb|ADP24017.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781143|gb|ADP24047.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 397 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310780905|gb|ADP23928.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 376 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310780901|gb|ADP23926.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780903|gb|ADP23927.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780939|gb|ADP23945.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780941|gb|ADP23946.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780943|gb|ADP23947.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310780947|gb|ADP23949.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781067|gb|ADP24009.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781135|gb|ADP24043.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781137|gb|ADP24044.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781139|gb|ADP24045.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781141|gb|ADP24046.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] gi|310781157|gb|ADP24054.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 398 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310780899|gb|ADP23925.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 449 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|310780897|gb|ADP23924.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 451 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 5 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 62 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 63 LHAGGKFNNDAYKVS 77 >gi|307265429|ref|ZP_07546985.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter wiegelii Rt8.B1] gi|306919543|gb|EFN49761.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter wiegelii Rt8.B1] Length = 633 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 41 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 98 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 99 LHAGGKFNNDAYKVS 113 >gi|290792686|gb|ADD63785.1| DNA gyrase subunit B [Borrelia hermsii] gi|290792694|gb|ADD63789.1| DNA gyrase subunit B [Borrelia hermsii] Length = 634 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 84/249 (33%), Gaps = 34/249 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IPMAVQR 74 + E+++NS+D A ++E +I + + DNG G+ EE + + + + Sbjct: 37 VYEVVDNSIDEALAGFCDKIEVIINSD--NSVTVNDNGRGIPTDVHEEEGISALELVLTK 94 Query: 75 -HCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEK 127 H K + + + G G AL S AV ++SR + Sbjct: 95 LHSGGKFNKGTYKV-SGGLHGVGISVVNALSSFLAV----IVSRDGKLFKQTYSRGIPTS 149 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFS 187 + V+ GT V A ++ + + ++ +R +A K+ + Sbjct: 150 EVDIIGVSSARGTKVT-------FLADSEIFETLEYDFETLSKRLRELAFLNDKIRISIE 202 Query: 188 TIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNA 247 +S + K+ G + + + + + G+ G + Sbjct: 203 DRRSGKEKLLEFYFEGGIKAFVDYITNNSKNIQNEPYFIEGSCDDVIVSVGLKW-TEGYS 261 Query: 248 NQFYVFING 256 + F+N Sbjct: 262 DHILSFVNN 270 >gi|262173021|ref|ZP_06040698.1| signal transduction histidine kinase [Vibrio mimicus MB-451] gi|261890379|gb|EEY36366.1| signal transduction histidine kinase [Vibrio mimicus MB-451] Length = 684 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 7/65 (10%) Query: 21 ERPSIAIKELIENSLDA-ESS-----RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 +R + L+ N+LDA + + V ++ DNG G+ E + + Sbjct: 577 QRLRQVLGNLVSNALDAMGKTPEPKLSISAVSEEHQV-IVRVNDNGCGIAPELLTTMFEP 635 Query: 75 HCTSK 79 TSK Sbjct: 636 FQTSK 640 >gi|297543507|ref|YP_003675809.1| DNA gyrase subunit B [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841282|gb|ADH59798.1| DNA gyrase, B subunit [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 633 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 41 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 98 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 99 LHAGGKFNNDAYKVS 113 >gi|289577274|ref|YP_003475901.1| DNA gyrase subunit beta [Thermoanaerobacter italicus Ab9] gi|289526987|gb|ADD01339.1| DNA gyrase, B subunit [Thermoanaerobacter italicus Ab9] Length = 633 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 41 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 98 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 99 LHAGGKFNNDAYKVS 113 >gi|229093888|ref|ZP_04224981.1| Sensor histidine kinase [Bacillus cereus Rock3-42] gi|228689493|gb|EEL43305.1| Sensor histidine kinase [Bacillus cereus Rock3-42] Length = 334 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ E+IP + T+K Sbjct: 242 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKEKIPKLNEAFYTTK 293 >gi|256376041|ref|YP_003099701.1| GAF sensor signal transduction histidine kinase [Actinosynnema mirum DSM 43827] gi|255920344|gb|ACU35855.1| GAF sensor signal transduction histidine kinase [Actinosynnema mirum DSM 43827] Length = 566 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 25 IAIKELIENSL-DAESSRVETVIAGGGKSFFQITDNGFGMTS 65 ++EL+ N++ + +S + I + + DNG GM Sbjct: 485 AVVRELVSNAVRHSGASELTVTIEADRQLTISVVDNGIGMPE 526 >gi|226312404|ref|YP_002772298.1| sporulation kinase [Brevibacillus brevis NBRC 100599] gi|226095352|dbj|BAH43794.1| sporulation kinase [Brevibacillus brevis NBRC 100599] Length = 606 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 30 LIENSLDAESSRVETVIA----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++NSLDA +S I + + TDNG G++ E +P + T+K Sbjct: 511 LLKNSLDAITSNGTISIETTCLPNNQVRIRFTDNGCGISQELLPRLGEPFYTTK 564 >gi|167585339|ref|ZP_02377727.1| periplasmic sensor signal transduction histidine kinase [Burkholderia ubonensis Bu] Length = 199 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 16/70 (22%) Query: 39 SSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEAL 97 + R++ I + Q+ DNG G+ + +P + T+K G RG L Sbjct: 100 APRIDVTIEASAATLAIQVRDNGPGIAPDLLPRLFEPFFTTK---------EMG-RGLGL 149 Query: 98 -----PSIGA 102 SI + Sbjct: 150 GLAISSSIAS 159 >gi|124486001|ref|YP_001030617.1| histidine kinase [Methanocorpusculum labreanum Z] gi|124363542|gb|ABN07350.1| histidine kinase [Methanocorpusculum labreanum Z] Length = 719 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 20 IERPSIAIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSE 66 + +IAI EL++NS DA + V G ++ +I D+G GMT + Sbjct: 24 VTNDNIAITELVKNSYDAFAYNVVVEFGEDEGGAYIKIIDDGLGMTRQ 71 >gi|167038684|ref|YP_001661669.1| DNA gyrase subunit B [Thermoanaerobacter sp. X514] gi|300913756|ref|ZP_07131073.1| DNA gyrase, B subunit [Thermoanaerobacter sp. X561] gi|307723227|ref|YP_003902978.1| DNA gyrase subunit B [Thermoanaerobacter sp. X513] gi|166852924|gb|ABY91333.1| DNA topoisomerase IV, B subunit [Thermoanaerobacter sp. X514] gi|300890441|gb|EFK85586.1| DNA gyrase, B subunit [Thermoanaerobacter sp. X561] gi|307580288|gb|ADN53687.1| DNA gyrase, B subunit [Thermoanaerobacter sp. X513] Length = 633 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A + I + + D+G G+ ++ P + Sbjct: 41 VYEVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTM 98 Query: 75 -HCTSKISDDFSNIH 88 H K ++D + Sbjct: 99 LHAGGKFNNDAYKVS 113 >gi|91772465|ref|YP_565157.1| DNA gyrase subunit B [Methanococcoides burtonii DSM 6242] gi|91711480|gb|ABE51407.1| DNA gyrase subunit B [Methanococcoides burtonii DSM 6242] Length = 632 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 6/48 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 + E+++NS+D A ++ I G + D+G G+ + P Sbjct: 39 VYEVVDNSIDEALAGFCKNIDVSINADG--SVTVVDDGRGIPVDNHPK 84 >gi|115522035|ref|YP_778946.1| DNA gyrase subunit B [Rhodopseudomonas palustris BisA53] gi|115515982|gb|ABJ03966.1| DNA gyrase subunit B [Rhodopseudomonas palustris BisA53] Length = 813 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A ++RVE V+ G + D+G G+ + Sbjct: 55 VYEVVDNAIDEALAGHATRVEVVLNADG--SVTVRDDGRGIPVD 96 >gi|311695553|gb|ADP98426.1| two-component sensor histidine kinase [marine bacterium HP15] Length = 539 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 7/64 (10%) Query: 23 PSIAIKELIENSLDA-----ESS-RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRH 75 + LI+N+LDA + RV+ + G+ ++ D G G+ E ++ Sbjct: 427 LVSVLGNLIDNALDATRLKTGAGGRVQLSMTDLGQELIFEVQDQGPGIPESERQRIFEKG 486 Query: 76 CTSK 79 +SK Sbjct: 487 VSSK 490 >gi|158315187|ref|YP_001507695.1| heat shock protein 90 [Frankia sp. EAN1pec] gi|158110592|gb|ABW12789.1| heat shock protein Hsp90 [Frankia sp. EAN1pec] Length = 643 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 71/222 (31%), Gaps = 49/222 (22%) Query: 27 IKELIENSLDAE-----SS-------------RVETVIAGGGKSFFQITDNGFGMTSEEI 68 ++ELI N+ DA +S + + ++ + DNG GM+ +++ Sbjct: 33 LRELISNASDALDKLRIASLVDKDLSTDTSDLHIALEVDREQRTL-TVRDNGIGMSRDDV 91 Query: 69 PMAVQRHCTS-------KISDDFSNIHTF--------GFRGEALPSIGAVS-HLTLMSRP 112 + S K + + GF S V+ +TL++R Sbjct: 92 VQLIGTIARSGTAEMLRKAKESKDAAASLDLIGQFGVGF-----YSTFMVADKVTLLTRR 146 Query: 113 PQNNTGAQIAISGEKISSVRPV-AMNPGTIVEV-------RDLFFTIPARLNFLKSEQVE 164 + G + GE + V GT V + D F A + + Sbjct: 147 AGESGGTRWESGGEGTYVIEDVDDAPQGTAVTLHLKPEDSEDHLFDYTAERKIREIVKRY 206 Query: 165 TNLITDVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFP 206 ++ I I RMA P + + + + ++ Sbjct: 207 SDFIAWPI-RMATENPDQAASTDEDGTATTDIQTLNSMKALW 247 >gi|106734191|gb|ABF82572.1| DNA topoisomerase IV subunit beta [uncultured bacterium] Length = 47 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G ++ + DNG G+ + Sbjct: 5 EIVDNSIDEALAGYCDTIKVTIEPG--NWILVEDNGRGIPVD 44 >gi|331004661|ref|ZP_08328123.1| DNA gyrase subunit B [Lachnospiraceae oral taxon 107 str. F0167] gi|330409588|gb|EGG89028.1| DNA gyrase subunit B [Lachnospiraceae oral taxon 107 str. F0167] Length = 637 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + ++ I + + DNG G+ + Sbjct: 39 VYEIVDNSVDEALAGFCTEIKVKINED--NSITVRDNGRGIPVD 80 >gi|324328676|gb|ADY23936.1| sensor histidine kinase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 406 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + Q+ D G G+ ++IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVEDA--IIIQVKDEGCGIPKDKIPKLNEAFYTTK 365 >gi|296274281|ref|YP_003656912.1| PAS/PAC sensor signal transduction histidine kinase [Arcobacter nitrofigilis DSM 7299] gi|296098455|gb|ADG94405.1| PAS/PAC sensor signal transduction histidine kinase [Arcobacter nitrofigilis DSM 7299] Length = 723 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 17/47 (36%), Gaps = 1/47 (2%) Query: 41 RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNI 87 + + I DNG G+ + + + TSK + D + Sbjct: 642 SISISLEDD-LLCISIKDNGIGIKDDNLEKIFEPFFTSKKNGDGFGL 687 >gi|294809110|ref|ZP_06767828.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Bacteroides xylanisolvens SD CC 1b] gi|294443664|gb|EFG12413.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Bacteroides xylanisolvens SD CC 1b] Length = 317 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEIVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|288871182|ref|ZP_06410058.1| putative two-component sensor histidine kinase YesM [Clostridium hathewayi DSM 13479] gi|288864488|gb|EFC96786.1| putative two-component sensor histidine kinase YesM [Clostridium hathewayi DSM 13479] Length = 624 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 7/49 (14%) Query: 30 LIENSLDAESSR------VETVI-AGGGKSFFQITDNGFGMTSEEIPMA 71 L+ENS+ + + I GG+ ++DNG GMT EE+ Sbjct: 519 LVENSIYHGGEKMLTPCKISVTIREEGGRITITVSDNGPGMTEEELEAV 567 >gi|288800604|ref|ZP_06406062.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 299 str. F0039] gi|288332817|gb|EFC71297.1| DNA gyrase, B subunit [Prevotella sp. oral taxon 299 str. F0039] Length = 657 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E ++NS+D A + +E I + + DNG G+ + Sbjct: 45 VNETVDNSIDEAMAGYCTDIEVTINED--NSITVQDNGRGIPVD 86 >gi|261491595|ref|ZP_05988178.1| tetrathionate reductase regulon sensor histidine kinase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494955|ref|ZP_05991424.1| tetrathionate reductase regulon sensor histidine kinase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309364|gb|EEY10598.1| tetrathionate reductase regulon sensor histidine kinase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312721|gb|EEY13841.1| tetrathionate reductase regulon sensor histidine kinase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 552 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 3/49 (6%) Query: 33 NSLDAESSRVETVIA--GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 N+L A +S + + G I DNG G + ++ T K Sbjct: 465 NALQAGASEISVRLQAVENGLE-IAIEDNGGGFSPAQLEFPFVPFRTDK 512 >gi|260172424|ref|ZP_05758836.1| DNA gyrase subunit B [Bacteroides sp. D2] gi|315920720|ref|ZP_07916960.1| hypothetical protein BSGG_2130 [Bacteroides sp. D2] gi|313694595|gb|EFS31430.1| hypothetical protein BSGG_2130 [Bacteroides sp. D2] Length = 652 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEIVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|255010097|ref|ZP_05282223.1| DNA gyrase subunit B [Bacteroides fragilis 3_1_12] gi|313147892|ref|ZP_07810085.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313136659|gb|EFR54019.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 652 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEIVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|237716665|ref|ZP_04547146.1| subunit B [Bacteroides sp. D1] gi|237720397|ref|ZP_04550878.1| DNA gyrase subunit B [Bacteroides sp. 2_2_4] gi|262405441|ref|ZP_06081991.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_22] gi|294646223|ref|ZP_06723877.1| DNA gyrase, B subunit [Bacteroides ovatus SD CC 2a] gi|298480563|ref|ZP_06998760.1| DNA gyrase, B subunit [Bacteroides sp. D22] gi|229442648|gb|EEO48439.1| subunit B [Bacteroides sp. D1] gi|229450148|gb|EEO55939.1| DNA gyrase subunit B [Bacteroides sp. 2_2_4] gi|262356316|gb|EEZ05406.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_22] gi|292638441|gb|EFF56805.1| DNA gyrase, B subunit [Bacteroides ovatus SD CC 2a] gi|295086258|emb|CBK67781.1| DNA gyrase subunit B [Bacteroides xylanisolvens XB1A] gi|298273384|gb|EFI14948.1| DNA gyrase, B subunit [Bacteroides sp. D22] Length = 652 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEIVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|160883910|ref|ZP_02064913.1| hypothetical protein BACOVA_01884 [Bacteroides ovatus ATCC 8483] gi|156110640|gb|EDO12385.1| hypothetical protein BACOVA_01884 [Bacteroides ovatus ATCC 8483] Length = 652 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEIVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|254361812|ref|ZP_04977947.1| tetrathionate reductase regulon sensor histidine kinase [Mannheimia haemolytica PHL213] gi|153093347|gb|EDN74343.1| tetrathionate reductase regulon sensor histidine kinase [Mannheimia haemolytica PHL213] Length = 552 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 3/49 (6%) Query: 33 NSLDAESSRVETVIA--GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 N+L A +S + + G I DNG G + ++ T K Sbjct: 465 NALQAGASEISVRLQAVENGLE-IAIEDNGGGFSPAQLEFPFVPFRTDK 512 >gi|153809174|ref|ZP_01961842.1| hypothetical protein BACCAC_03484 [Bacteroides caccae ATCC 43185] gi|149128150|gb|EDM19370.1| hypothetical protein BACCAC_03484 [Bacteroides caccae ATCC 43185] Length = 652 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEIVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|29348838|ref|NP_812341.1| DNA gyrase subunit B [Bacteroides thetaiotaomicron VPI-5482] gi|253568817|ref|ZP_04846227.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298387912|ref|ZP_06997461.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_14] gi|29340744|gb|AAO78535.1| DNA gyrase subunit B [Bacteroides thetaiotaomicron VPI-5482] gi|251840836|gb|EES68917.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|298259319|gb|EFI02194.1| DNA gyrase, B subunit [Bacteroides sp. 1_1_14] Length = 653 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEIVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|53711588|ref|YP_097580.1| DNA gyrase B subunit [Bacteroides fragilis YCH46] gi|60679839|ref|YP_209983.1| DNA gyrase subunit B [Bacteroides fragilis NCTC 9343] gi|253564361|ref|ZP_04841818.1| subunit B [Bacteroides sp. 3_2_5] gi|265764971|ref|ZP_06093246.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_16] gi|52214453|dbj|BAD47046.1| DNA gyrase B subunit [Bacteroides fragilis YCH46] gi|60491273|emb|CAH06021.1| DNA gyrase subunit B [Bacteroides fragilis NCTC 9343] gi|251948137|gb|EES88419.1| subunit B [Bacteroides sp. 3_2_5] gi|263254355|gb|EEZ25789.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_16] gi|301161359|emb|CBW20899.1| DNA gyrase subunit B [Bacteroides fragilis 638R] Length = 652 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEIVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|6006289|dbj|BAA84773.1| DNA gyrase B subunit [Bacteroides fragilis] Length = 653 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEIVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|110635898|ref|YP_676106.1| periplasmic sensor signal transduction histidine kinase [Mesorhizobium sp. BNC1] gi|110286882|gb|ABG64941.1| periplasmic sensor signal transduction histidine kinase [Chelativorans sp. BNC1] Length = 589 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 12/74 (16%) Query: 15 AAGE--IIE----RPSIAIKELIENSL----DAESSRVETVIAGGGKSFF-QITDNGFGM 63 AG+ +++ R + LIEN+ D RV ++ + + DNG G+ Sbjct: 461 KAGQSFVVQGHDLRLGQVVTNLIENARSFVPDEG-GRVTITLSRSQRRIIITVDDNGPGI 519 Query: 64 TSEEIPMAVQRHCT 77 ++ I +R T Sbjct: 520 RADNIDRIFERFYT 533 >gi|310781033|gb|ADP23992.1| DNA gyrase B subunit [Thermoanaerobacter uzonensis] Length = 392 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 15/73 (20%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR---------H 75 E+++NS+D A + I + + D+G G+ ++ P + H Sbjct: 2 EVVDNSIDEALAGYCKNIVVTIHKD--NSITVEDDGRGIPTDIHPKVGKPAVEVALTMLH 59 Query: 76 CTSKISDDFSNIH 88 K ++D + Sbjct: 60 AGGKFNNDAYKVS 72 >gi|326775215|ref|ZP_08234480.1| DNA topoisomerase type IIA subunit B region 2 domain protein [Streptomyces cf. griseus XylebKG-1] gi|326655548|gb|EGE40394.1| DNA topoisomerase type IIA subunit B region 2 domain protein [Streptomyces cf. griseus XylebKG-1] Length = 643 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 6/50 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAV 72 + EL++N++D A + + G G +TD+G G+ +++ P A Sbjct: 39 VLELVDNAVDEAAAGHCGTISVELHGDG--SCSVTDDGRGIPTDQHPEAG 86 >gi|289625656|ref|ZP_06458610.1| sensor histidine kinase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648217|ref|ZP_06479560.1| sensor histidine kinase [Pseudomonas syringae pv. aesculi str. 2250] gi|330868794|gb|EGH03503.1| sensor histidine kinase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 581 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAE----SSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA S R++ I + + DNG G+ E + Sbjct: 473 RLEQVLINLLRNALDAMRECPSRRLDVRIDAIDKQWRLSVKDNGTGIAEENLASIFDPFF 532 Query: 77 TSK 79 T+K Sbjct: 533 TTK 535 >gi|255523796|ref|ZP_05390761.1| histidine kinase [Clostridium carboxidivorans P7] gi|255512499|gb|EET88774.1| histidine kinase [Clostridium carboxidivorans P7] Length = 141 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Query: 30 LIENSLDAES--SRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L+ NS+ + + ++ + K + I DNG GM+ EE+ +R+ Sbjct: 47 LLYNSVIHNAPDTIIKVSVRQEDKIYITIEDNGKGMSEEEVKKLFERYY 95 >gi|254496578|ref|ZP_05109446.1| sensor kinase HydH [Legionella drancourtii LLAP12] gi|254354202|gb|EET12869.1| sensor kinase HydH [Legionella drancourtii LLAP12] Length = 333 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 21 ERPSIAIKELIENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E A+ L+ N++ +E++ V + G + DNG GM+ E A T Sbjct: 234 ESLIGAVLNLVINAIQSEATEVYLTLASMDNSGIQ-ILVEDNGKGMSEEVKNHAFSPFYT 292 Query: 78 SK 79 +K Sbjct: 293 TK 294 >gi|269120931|ref|YP_003309108.1| histidine kinase [Sebaldella termitidis ATCC 33386] gi|268614809|gb|ACZ09177.1| histidine kinase [Sebaldella termitidis ATCC 33386] Length = 497 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 9/64 (14%) Query: 20 IER--PSIAIKELIENSLD---AESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAV 72 I+R AI+ LIEN++ A + + I GK+ ++D G G+ E Sbjct: 374 IDRSLLKQAIRALIENAIKYSPAN-TTITIDSYIED-GKARISVSDMGIGIDKSEHAKIF 431 Query: 73 QRHC 76 +R Sbjct: 432 ERFY 435 >gi|182434701|ref|YP_001822420.1| putative DNA gyrase B subunit [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463217|dbj|BAG17737.1| putative DNA gyrase B subunit [Streptomyces griseus subsp. griseus NBRC 13350] Length = 643 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 6/50 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAV 72 + EL++N++D A + + G G +TD+G G+ +++ P A Sbjct: 39 VLELVDNAVDEAAAGHCGTISVELHGDG--SCSVTDDGRGIPTDQHPEAG 86 >gi|71725920|gb|AAZ39078.1| gyrase subunit B [Exiguobacterium aurantiacum] Length = 512 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + G + + D+G G+ + Sbjct: 20 EIVDNSIDEALAGHCETITVTVEPG--NSIVVEDDGRGIPVD 59 >gi|329851060|ref|ZP_08265817.1| ATPase [Asticcacaulis biprosthecum C19] gi|328839906|gb|EGF89478.1| ATPase [Asticcacaulis biprosthecum C19] Length = 493 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 10/129 (7%) Query: 22 RPSIAIKELIENSLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 A+ ++++NS+ A+++ ++ A + I DNG GM + A R+ S+ Sbjct: 23 SLETAVADVVDNSIAAKATTIDVWCHAEAARPSLAIVDNGDGMDEATLIEA-MRYG-SRN 80 Query: 81 SDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQNNTGAQI-----AISGEKISSVRP 133 D G G + S LT++SR + GA+ A +IS + P Sbjct: 81 PRDKRPPTDLGRFGLGMKTASFSQCRKLTVVSRVGDSFAGAEWDLDVLADDHWRISILDP 140 Query: 134 VAMNPGTIV 142 Sbjct: 141 DECRLVPWF 149 >gi|313887747|ref|ZP_07821429.1| DNA gyrase, B subunit [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846356|gb|EFR33735.1| DNA gyrase, B subunit [Peptoniphilus harei ACS-146-V-Sch2b] Length = 637 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + I G +ITDNG G+ + Sbjct: 42 VYEIVDNSIDEALAGICDHIIIKINKNG--SVEITDNGSGIPVD 83 >gi|311745397|ref|ZP_07719182.1| heat shock protein HtpG [Algoriphagus sp. PR1] gi|126577944|gb|EAZ82164.1| heat shock protein HtpG [Algoriphagus sp. PR1] Length = 628 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 62/547 (11%), Positives = 151/547 (27%), Gaps = 86/547 (15%) Query: 27 IKELIENSLDA-----------------ESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 ++EL+ N++DA + VE K I+D G GMT+EEI Sbjct: 30 LRELVSNAVDATQKIKRLATLGQYTGELGDTTVEVSFDE-KKKTITISDKGLGMTAEEIK 88 Query: 70 MAVQRHCTS-------KISD--DFSNI---HTFGFRGEALPSIGAVS-HLTLMSRPPQNN 116 + + S K D D + I GF S V+ + + + Sbjct: 89 KYINQVAFSGAEEFVEKFKDAKDANEIIGKFGLGF-----YSAFMVADKVEINT------ 137 Query: 117 TGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMA 176 +S ++ + + T E+ + S + + I + + Sbjct: 138 ------LSYQEGAEPAKWTCDGSTSFEISE------------GSRKERGTDVILHINKDS 179 Query: 177 IAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGY 236 + + + G E + + + + ++ T + Sbjct: 180 EEFVDKFKLQGILDKYAKFLPVPIKFGTKTESVEDGVDDKGEKKWKSVEVENFINTTEPI 239 Query: 237 TGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVD 296 + + + + + YP + + P+ + Sbjct: 240 WTKSPSDLKDEDYLNFYKELYPMS--------EDPLFWIHLNVDYPFNLTGVLYFPKVKN 291 Query: 297 VNVHPAKSYIRFRNPTIIRNFIIQSIQKAIN-KKGISTSSVLSKKMISSFHQDNAPKTHL 355 F I + + + + + G+ S + + SF Q + + Sbjct: 292 EFELQRNKIKLFSRQVFITDEVKDIVPEFLMLLHGVIDSPDIPLNVSRSFLQADGNVKKI 351 Query: 356 PKYATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQ 415 Y T + +++R S + D + + E+ + + Sbjct: 352 NSYITKKVADKLAELFKKDRTSY-EAKWDDIGLFVKYGMISEDKFYEKGKDFALLKNTNG 410 Query: 416 NYIISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDL--LEGECALI 473 Y + V +Q +E+ + + + + I Sbjct: 411 EYFTLEEYQAKVKPNQTDKNEQTVILYATDLEKQDSFIQSANKKDYDVLVMDSPIDSHFI 470 Query: 474 MEHDEDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQLLRDIIDEIIDSSTTYTLQDRI 533 + L + ++ + A +++K I + D D ++ + +++ Sbjct: 471 QNLESKLEKT------------QLKRVDADVAEKLIQK--EDTYDNLLTEDQSKEVKEIF 516 Query: 534 ENILATM 540 E + Sbjct: 517 EKAINNK 523 >gi|106734213|gb|ABF82583.1| DNA topoisomerase IV subunit beta [uncultured bacterium] gi|106734219|gb|ABF82586.1| DNA topoisomerase IV subunit beta [uncultured bacterium] Length = 47 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG+G+ + Sbjct: 5 EIVDNSIDEALAGYCDTIKVTIEPG--NSILVEDNGWGIPVD 44 >gi|89054222|ref|YP_509673.1| periplasmic sensor signal transduction histidine kinase [Jannaschia sp. CCS1] gi|88863771|gb|ABD54648.1| periplasmic sensor signal transduction histidine kinase [Jannaschia sp. CCS1] Length = 621 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 22 RPSIAIKELIENSLDAESS----RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 R + L+ N+LDA + +E + GG + D G G++ E + A T Sbjct: 502 RLQQVVVNLLGNALDAMAQVDPPTIEITLTGGDAPQIAVRDIGPGLSDEALAHAFDPFFT 561 Query: 78 SK 79 +K Sbjct: 562 TK 563 >gi|259415818|ref|ZP_05739738.1| periplasmic sensor signal transduction histidine kinase [Silicibacter sp. TrichCH4B] gi|259347257|gb|EEW59034.1| periplasmic sensor signal transduction histidine kinase [Silicibacter sp. TrichCH4B] Length = 600 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 10/64 (15%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N+LDA ++ VE ++A G + + DNG G+ ++ + Sbjct: 490 RLEQVMVNLLRNALDA--TKSVEEPEVEIILAAGETATLTVRDNGDGI--QDFDSLFEPF 545 Query: 76 CTSK 79 T+K Sbjct: 546 YTTK 549 >gi|260578370|ref|ZP_05846284.1| sensor histidine kinase [Corynebacterium jeikeium ATCC 43734] gi|258603392|gb|EEW16655.1| sensor histidine kinase [Corynebacterium jeikeium ATCC 43734] Length = 486 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 13/65 (20%) Query: 20 IERPSIAIKELIENSL-----DAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMA 71 + R + L+ N+L DA E + G + DNG G+ +E++P Sbjct: 373 VNRLHQVLGNLVTNALRHAGEDA-----EVKLRLDKRDGHVIVDVEDNGRGIPAEDVPHL 427 Query: 72 VQRHC 76 +R Sbjct: 428 FERFY 432 >gi|68535407|ref|YP_250112.1| two-component system sensor kinase TcsS1 [Corynebacterium jeikeium K411] gi|68263006|emb|CAI36494.1| two-component system sensor kinase TcsS1 [Corynebacterium jeikeium K411] Length = 536 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 13/65 (20%) Query: 20 IERPSIAIKELIENSL-----DAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMA 71 + R + L+ N+L DA E + G + DNG G+ +E++P Sbjct: 426 VNRLHQVLGNLVTNALRHAGEDA-----EVKLRLDKRDGHVIVDVEDNGRGIPAEDVPHL 480 Query: 72 VQRHC 76 +R Sbjct: 481 FERFY 485 >gi|99081303|ref|YP_613457.1| periplasmic sensor signal transduction histidine kinase [Ruegeria sp. TM1040] gi|99037583|gb|ABF64195.1| periplasmic sensor signal transduction histidine kinase [Ruegeria sp. TM1040] Length = 600 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 10/64 (15%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N+LDA ++ VE ++A G + + DNG G+ ++ + Sbjct: 490 RLEQVMVNLLRNALDA--TKSVEEPEVEIILAAGETATLTVRDNGDGI--QDFDSLFEPF 545 Query: 76 CTSK 79 T+K Sbjct: 546 YTTK 549 >gi|313885866|ref|ZP_07819607.1| DNA topoisomerase IV subunit B [Porphyromonas asaccharolytica PR426713P-I] gi|312924695|gb|EFR35463.1| DNA topoisomerase IV subunit B [Porphyromonas asaccharolytica PR426713P-I] Length = 673 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 68/227 (29%), Gaps = 30/227 (13%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS--- 78 IKE+I+NS+D S + I + QI D G G+ + V TS Sbjct: 60 IKEVIDNSIDEFVMGVGS-EIRITI-DSETNEVQIRDYGRGIP---LGKLVD--ATSKMN 112 Query: 79 ---KISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRPV 134 KI + G G L ++ A+S T+ S + + + Sbjct: 113 TGAKIDSQAFK-KSVGLNGVGLKAVNALSSTFTVQSWREGETSSVTYERAEMVAHTPAAP 171 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF----TFSTIK 190 + EV + ++ + + ++R ++ + Sbjct: 172 CEDK----EVHGTLVSFTPDAEVFRNSHYDLRHVEALVRNYCYLNTGLTLYLNDKKYVSR 227 Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDF--INNAVELNEKSNEITLQG 235 + G+ I ++ G D +E + + G Sbjct: 228 HGLQDFLSDTITGDPLYPIIRLTGPDIEVAITHIEQYGEEFYSFVNG 274 >gi|297191601|ref|ZP_06908999.1| two-component system sensor kinase [Streptomyces pristinaespiralis ATCC 25486] gi|197719341|gb|EDY63249.1| two-component system sensor kinase [Streptomyces pristinaespiralis ATCC 25486] Length = 575 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 11/74 (14%) Query: 30 LIENSLDAESSR----VETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDF 84 L++N+LDA + +E + GG ++ D+G G+ +E T+K Sbjct: 435 LVDNALDAAAGTPDAQIEVELHTVGGTVILRVADSGPGVPAEHRESIFTEGWTTK----- 489 Query: 85 SNIHTFGFRGEALP 98 + + G RG LP Sbjct: 490 -ELPSHGKRGLGLP 502 >gi|194339099|gb|ACF49465.1| GyrB [Amycolatopsis plumensis] Length = 446 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 17/76 (22%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIPM---------AV 72 ++E+++NS+D A +++VE + A GG ++ D+G G+ + P Sbjct: 3 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVDMHPKENKPTIEVVLT 59 Query: 73 QRHCTSKISDDFSNIH 88 Q H K D + Sbjct: 60 QLHAGGKFDSDSYAVS 75 >gi|194339061|gb|ACF49446.1| GyrB [Amycolatopsis balhimycina] Length = 463 Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 17/76 (22%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIPM---------AV 72 ++E+++NS+D A +++VE + A GG ++ D+G G+ + P Sbjct: 4 VQEVVDNSVDEAMAGHATKVEVTLLADGG---VRVVDDGRGIPVDMHPKENKPTIEVVLT 60 Query: 73 QRHCTSKISDDFSNIH 88 Q H K D + Sbjct: 61 QLHAGGKFDSDSYAVS 76 >gi|320325517|gb|EFW81579.1| sensor histidine kinase [Pseudomonas syringae pv. glycinea str. B076] gi|320327195|gb|EFW83209.1| sensor histidine kinase [Pseudomonas syringae pv. glycinea str. race 4] gi|330880796|gb|EGH14945.1| sensor histidine kinase [Pseudomonas syringae pv. glycinea str. race 4] Length = 585 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAE----SSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA S R+E I + + DNG G+ E + Sbjct: 477 RLEQVLINLLRNALDAMRECPSRRLEVRIDAIDKQWRLSVKDNGTGIAEENLASIFDPFF 536 Query: 77 TSK 79 T+K Sbjct: 537 TTK 539 >gi|313902446|ref|ZP_07835848.1| integral membrane sensor signal transduction histidine kinase [Thermaerobacter subterraneus DSM 13965] gi|313467244|gb|EFR62756.1| integral membrane sensor signal transduction histidine kinase [Thermaerobacter subterraneus DSM 13965] Length = 521 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 19/67 (28%) Query: 21 ERPSIAIKELIENS-----------LDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 R + + L++N+ LDA V+ GG ++ DNG G+ ++P Sbjct: 369 HRLAQVLGNLVDNAARHAGPEGQVRLDA-------VLVPGGI-RIEVADNGPGIDPADLP 420 Query: 70 MAVQRHC 76 + Sbjct: 421 RIFEPFY 427 >gi|299132907|ref|ZP_07026102.1| histidine kinase [Afipia sp. 1NLS2] gi|298593044|gb|EFI53244.1| histidine kinase [Afipia sp. 1NLS2] Length = 432 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 17/84 (20%) Query: 31 IENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHT- 89 +E+S A +++ G + D+G GM E + A R+ T+K + + + T Sbjct: 235 VEHS--AGATQ--------GFVEIVVADDGMGMPEEVLSQAFTRYFTTKPASNLNRPPTD 284 Query: 90 FGF---RGEA-LPSIGAVSHLTLM 109 G RG A L S SHL + Sbjct: 285 CGGTPARGRATLSSQS--SHLRMR 306 >gi|298488635|ref|ZP_07006665.1| C4-dicarboxylate transport sensor protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298156976|gb|EFH98066.1| C4-dicarboxylate transport sensor protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 585 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAE----SSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA S R+E I + + DNG G+ E + Sbjct: 477 RLEQVLINLLRNALDAMRERPSRRLEVRIDAIDKQWRLSVKDNGTGIAEENLASIFDPFF 536 Query: 77 TSK 79 T+K Sbjct: 537 TTK 539 >gi|257486467|ref|ZP_05640508.1| sensor histidine kinase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330987805|gb|EGH85908.1| sensor histidine kinase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 585 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAE----SSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA S R+E I + + DNG G+ E + Sbjct: 477 RLEQVLINLLRNALDAMRECPSRRLEVRIDAIDKQWRLSVKDNGTGIAEENLASIFDPFF 536 Query: 77 TSK 79 T+K Sbjct: 537 TTK 539 >gi|226327149|ref|ZP_03802667.1| hypothetical protein PROPEN_01014 [Proteus penneri ATCC 35198] gi|225204367|gb|EEG86721.1| hypothetical protein PROPEN_01014 [Proteus penneri ATCC 35198] Length = 387 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 72/211 (34%), Gaps = 31/211 (14%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE---------- 66 RP+ +E+I+NS+D A +S+V+ ++ ++ DNG GM + Sbjct: 31 TRPNHLAQEVIDNSVDEALAGHASKVDVILYAD--QSIEVIDNGRGMPVDIHPELKVSAI 88 Query: 67 EIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAI 123 E+ +A H K S+ + G G + + A+S + + R + Sbjct: 89 ELILAHL-HAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRIEVTVRRDGKIYQIAFENGD 146 Query: 124 SGEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-- 180 E++ + + GT V KS V++ A+ P Sbjct: 147 KVEELHEIGTCAKRDTGTSVHFWPDGAYFDVPRFSSKSLS-------HVLKAKAVLCPGV 199 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQ 211 VSF + E +++ Sbjct: 200 NVSFVDKVNNTQENWCYADGLTDYLSEAVAE 230 >gi|213023885|ref|ZP_03338332.1| DNA mismatch repair protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 153 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 51/155 (32%), Gaps = 3/155 (1%) Query: 358 YATSLTNTQEKLFLQENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIHQNY 417 ++ + Q+ + L T + G + + Sbjct: 2 RQSAGGWPHAQPGYQKQQGEVYRTLLQTPTTSPAPEPVAPALDGHSQSFGRVLTIVGGDC 61 Query: 418 IISQTTDGLVIVDQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHD 477 + + + ++ A L ++ + + +Q LL P + + E A + + Sbjct: 62 ALLEHAGTIQLLSLPVAERWLRQAQL--TPGQSPVCAQPLLIPLRLKVSADEKAALQKAQ 119 Query: 478 EDLHRLGIKAERFGPNAIAIREIPAILSKKNIPQL 512 L LGI+ + + IR +P L ++N+ L Sbjct: 120 SLLGELGIEFQS-DAQHVTIRAVPLPLRQQNLQIL 153 >gi|169840071|ref|ZP_02873259.1| DNA gyrase subunit B [candidate division TM7 single-cell isolate TM7a] Length = 99 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ I G ++TDNG G+ Sbjct: 28 EIVDNSVDEALAGVCDKITVKILEGNI--IEVTDNGRGIP 65 >gi|281356695|ref|ZP_06243186.1| DNA gyrase, B subunit [Victivallis vadensis ATCC BAA-548] gi|281316822|gb|EFB00845.1| DNA gyrase, B subunit [Victivallis vadensis ATCC BAA-548] Length = 824 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +S +E I + + D+G G+ + Sbjct: 49 VYEVVDNSIDEALAGYASHIEVTIHSD--NSISVEDDGRGIPVD 90 >gi|149010561|ref|ZP_01831932.1| DNA gyrase, B subunit [Streptococcus pneumoniae SP19-BS75] gi|147765042|gb|EDK71971.1| DNA gyrase, B subunit [Streptococcus pneumoniae SP19-BS75] gi|332077223|gb|EGI87685.1| DNA gyrase, B subunit [Streptococcus pneumoniae GA17545] Length = 648 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A SS ++ I + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFSSHIQVFIEPD--DSITVVDDGRGIPVD 88 >gi|71737124|ref|YP_276132.1| sensor histidine kinase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557677|gb|AAZ36888.1| sensor histidine kinase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 585 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAE----SSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA S R+E I + + DNG G+ E + Sbjct: 477 RLEQVLINLLRNALDAMRECPSRRLEVRIDAIDKQWRLSVKDNGTGIAEENLASIFDPFF 536 Query: 77 TSK 79 T+K Sbjct: 537 TTK 539 >gi|332300679|ref|YP_004442600.1| DNA topoisomerase type IIA subunit B region 2 domain protein [Porphyromonas asaccharolytica DSM 20707] gi|332177742|gb|AEE13432.1| DNA topoisomerase type IIA subunit B region 2 domain protein [Porphyromonas asaccharolytica DSM 20707] Length = 673 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 68/227 (29%), Gaps = 30/227 (13%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS--- 78 IKE+I+NS+D S + I + QI D G G+ + V TS Sbjct: 60 IKEVIDNSIDEFVMGVGS-EIRITI-DSETNEVQIRDYGRGIP---LGKLVD--ATSKMN 112 Query: 79 ---KISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRPV 134 KI + G G L ++ A+S T+ S + + + Sbjct: 113 TGAKIDSQAFK-KSVGLNGVGLKAVNALSSTFTVQSWREGETSSVTYERAEMVAHTPAAP 171 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF----TFSTIK 190 + G V + ++ + + ++R ++ + Sbjct: 172 CEDKG----VHGTLVSFTPDAEVFRNSHYDLRHVEALVRNYCYLNTGLTLYLNDKKYVSR 227 Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDF--INNAVELNEKSNEITLQG 235 + G+ I ++ G D +E + + G Sbjct: 228 HGLQDFLSDTITGDPLYPIIRLTGPDIEVAITHIEQYGEEFYSFVNG 274 >gi|188996682|ref|YP_001930933.1| histidine kinase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931749|gb|ACD66379.1| histidine kinase [Sulfurihydrogenibium sp. YO3AOP1] Length = 337 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%) Query: 23 PSIAIKELIENSLDAESSRVETVIA---GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 SIA+K LIEN++ + G + D G G+ E IP+ +R Sbjct: 231 LSIALKNLIENAIKYNVQNGTVEVNAKTDGKYDIISVIDTGIGIPPESIPLVFERFY 287 >gi|115381154|gb|ABI96226.1| DNA gyrase subunit B [Mesoplasma corruscae] Length = 553 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 15/73 (20%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT--------SEEIPMAVQR-H 75 E+++NS+D A + ++ + G + DNG G+ + + + H Sbjct: 14 EILDNSIDEAMAGFADKITLTLTKDG--EVIVEDNGRGIPVGVQQDSGKSALELVFTQLH 71 Query: 76 CTSKISDDFSNIH 88 K D I Sbjct: 72 AGGKFDSDSYKIS 84 >gi|98990342|gb|ABF60240.1| DNA gyrase subunit B [Entomoplasma ellychniae] Length = 553 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 15/73 (20%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT--------SEEIPMAVQR-H 75 E+++NS+D A + ++ + G + DNG G+ + + + H Sbjct: 14 EILDNSIDEAMAGFADKITLTLTKDG--EVIVEDNGRGIPVGVQQDSGKSALELVFTQLH 71 Query: 76 CTSKISDDFSNIH 88 K D I Sbjct: 72 AGGKFDSDSYKIS 84 >gi|33860313|gb|AAQ54936.1| DNA gyrase subunit B [Mesoplasma corruscae] Length = 534 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 15/73 (20%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT--------SEEIPMAVQR-H 75 E+++NS+D A + ++ + G + DNG G+ + + + H Sbjct: 9 EILDNSIDEAMAGFADKITLTLTKDG--EVIVEDNGRGIPVGVQQDSGKSALELVFTQLH 66 Query: 76 CTSKISDDFSNIH 88 K D I Sbjct: 67 AGGKFDSDSYKIS 79 >gi|86133355|ref|ZP_01051937.1| DNA topoisomerase IV subunit B [Polaribacter sp. MED152] gi|85820218|gb|EAQ41365.1| DNA topoisomerase IV subunit B [Polaribacter sp. MED152] Length = 619 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 35/245 (14%), Positives = 76/245 (31%), Gaps = 37/245 (15%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT---- 77 +KE+++NS+D A +E I G S + D G G+ ++ V + T Sbjct: 46 VKEVLDNSIDEYVMGAG-KTIEISIHG---SKVTVRDYGRGIPLGKVVDVVSKMNTGGKY 101 Query: 78 -SKI---SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRP 133 SK S + + T A+ ++ + + SR ++ + + E + Sbjct: 102 DSKAFKKSVGLNGVGTK-----AVNALSSYFRVE-SSREGKSASAEFSQGNLENEEFLEE 155 Query: 134 VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF-----TFST 188 + GT V K+ + + +++ P ++ F + Sbjct: 156 TSRRKGTKVS-------FIPDETIFKNYKFRNEYVAKMLKNYVYLNPGLTIIFNGEKFFS 208 Query: 189 IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNAN 248 + + + + I + G+D + +E G Sbjct: 209 KNGLKDLLEDNNNTDDMLYPIIHLKGDDIEIAVTHSKTQYSEEYYSFVNG--QHTTQGGT 266 Query: 249 QFYVF 253 F Sbjct: 267 HQSAF 271 >gi|26986758|ref|NP_742183.1| DNA gyrase subunit B [Pseudomonas putida KT2440] gi|148545263|ref|YP_001265365.1| DNA gyrase subunit B [Pseudomonas putida F1] gi|24981349|gb|AAN65647.1|AE016191_4 DNA gyrase, subunit B [Pseudomonas putida KT2440] gi|148509321|gb|ABQ76181.1| DNA gyrase subunit B [Pseudomonas putida F1] gi|313496421|gb|ADR57787.1| GyrB [Pseudomonas putida BIRD-1] Length = 806 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 71/247 (28%), Gaps = 25/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDITVIIHPD--ESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+S L L R + + V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKLVLTVRRSG--KIWEQTYVHGVPQAPMAV 158 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 + T K+ +++ IR ++ V +S + Sbjct: 159 VGDSETT----GTHIHFKPSAETFKNIHFSWDILAKRIRELSFLNSGVGILLKDERSGKE 214 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 + F G + + N+ + G +N F Sbjct: 215 E--FFKYEGGLRAFVEYLNTNKTPVNSQVFHFNVQRDDGVGVEVALQWNDSFNENLLCFT 272 Query: 255 NGRTVQD 261 N +D Sbjct: 273 NNIPQRD 279 >gi|328956387|ref|YP_004373773.1| DNA gyrase, subunit B [Carnobacterium sp. 17-4] gi|328672711|gb|AEB28757.1| DNA gyrase, subunit B [Carnobacterium sp. 17-4] Length = 647 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + +I + DNG G+ + Sbjct: 53 EIVDNSIDEALAGFADEINLIIEKD--ESITVIDNGRGIPVD 92 >gi|326383914|ref|ZP_08205598.1| DNA gyrase subunit B [Gordonia neofelifaecis NRRL B-59395] gi|326197373|gb|EGD54563.1| DNA gyrase subunit B [Gordonia neofelifaecis NRRL B-59395] Length = 684 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 15/54 (27%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E+++NS+D A ++RV+ + A GG ++ D+G GM V H T Sbjct: 56 EVVDNSVDEAMAGYATRVDVTLLADGG---IRVVDDGRGMP-------VGMHAT 99 >gi|297625347|ref|YP_003687110.1| ATP-binding region, ATPase-like:Histidine kinase, Histidine kinase A-like precursor [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921112|emb|CBL55659.1| ATP-binding region, ATPase-like:Histidine kinase, Histidine kinase A-like precursor [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 373 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 16/69 (23%) Query: 22 RPSIAIKELIENSLDAESS-------------RVETVIAGGGKSF-FQITDNGFGMTSEE 67 R + I L+ N+L ++ V + G Q+ D+G G++ EE Sbjct: 255 RFAQVITNLLANAL--NATVSAGRGRTGDRGGHVHVGVRRHGNEVAVQVRDDGVGISPEE 312 Query: 68 IPMAVQRHC 76 +P R Sbjct: 313 LPHVFDRFA 321 >gi|294634295|ref|ZP_06712836.1| DNA topoisomerase IV, B subunit [Edwardsiella tarda ATCC 23685] gi|291092288|gb|EFE24849.1| DNA topoisomerase IV, B subunit [Edwardsiella tarda ATCC 23685] Length = 631 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 78/211 (36%), Gaps = 29/211 (13%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A ++RVE ++ ++ D+G GM EE I Sbjct: 31 TRPNHLGQEVIDNSIDEALAGHATRVEVILHPD--QSLEVIDDGRGMPVDIHPEEGVPAI 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQN--NTGAQIAIS 124 + + R H K S+ + G G + + A+SH + + R + Sbjct: 89 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSHRVEVSVRRDGQIYQIAFENGEK 147 Query: 125 GEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 E++ V N GT V F S + + ++ +++ A+ P V Sbjct: 148 VEELHVTGTVGRRNTGTSVHFW-------PDAQFFDSARFSVSRLSHLLKAKAVLCPGVE 200 Query: 184 --FTFSTIKSNRYKMNFQSTNGNFPERISQV 212 F S + E ++ + Sbjct: 201 ILFRDLVNGSEQRWCYQDGLTDYLMESVNGL 231 >gi|284802097|ref|YP_003413962.1| hypothetical protein LM5578_1852 [Listeria monocytogenes 08-5578] gi|284995239|ref|YP_003417007.1| hypothetical protein LM5923_1804 [Listeria monocytogenes 08-5923] gi|284057659|gb|ADB68600.1| hypothetical protein LM5578_1852 [Listeria monocytogenes 08-5578] gi|284060706|gb|ADB71645.1| hypothetical protein LM5923_1804 [Listeria monocytogenes 08-5923] Length = 822 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 18 EIIERPSIAIKELIENSLDAESSRVETVIAGGGK--SFFQITDNGFGMTSEEIP 69 E++ A+ ELI+NS DA++ V+ ++ S + D G GMT E+ Sbjct: 19 ELVTDFVTALVELIKNSYDADAYGVKIILDKPNTPESKIILIDTGSGMTQEDFE 72 >gi|210634747|ref|ZP_03298275.1| hypothetical protein COLSTE_02202 [Collinsella stercoris DSM 13279] gi|210158687|gb|EEA89658.1| hypothetical protein COLSTE_02202 [Collinsella stercoris DSM 13279] Length = 674 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 6/45 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 E+++NS+D A +++E + + + DNG G+ +E P Sbjct: 43 EIVDNSVDEAMAGFCTKIEVTVHPD--NSITVVDNGRGIPVDEHP 85 >gi|332881000|ref|ZP_08448670.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681174|gb|EGJ54101.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 655 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 63/222 (28%), Gaps = 32/222 (14%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT-SKI 80 +KE+I+NS+D A R+E + + D G G+ ++ AV T K Sbjct: 55 LKEVIDNSIDEFKMNAG-RRIEITVEDN--LRVSVRDYGRGIPLGKLIEAVSMLNTGGKY 111 Query: 81 SDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 + G G AL S H + S A S P Sbjct: 112 DSKAFK-KSVGLNGVGVKAVNALSS-----HFEVRSHRDGEMRRATFERGILTGESTEPT 165 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF----TFSTIK 190 A GT + K+ T I ++R ++ + Sbjct: 166 ADENGTFIYFE-------PDSALFKNYTFRTEFIETMLRNYTYLNTGLTIMFNGRRIHSR 218 Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 + + + + I + GED + E Sbjct: 219 NGLVDLLNDNMTNDGLYPIIHLKGEDIEIAFTHTGQYGEEYY 260 >gi|260890953|ref|ZP_05902216.1| DNA gyrase, B subunit [Leptotrichia hofstadii F0254] gi|260859506|gb|EEX74006.1| DNA gyrase, B subunit [Leptotrichia hofstadii F0254] Length = 660 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 14/72 (19%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT-------SEEIPMAVQ-RHC 76 E+++NS+D A ++ I G +++DNG G+ + + + H Sbjct: 41 EIVDNSVDEALAGICDKITVKILEGNI--IEVSDNGRGIPVGMHKTGKSTLEVVLTVLHA 98 Query: 77 TSKISDDFSNIH 88 K +D + Sbjct: 99 GGKFDNDNYKVS 110 >gi|257127028|ref|YP_003165142.1| DNA gyrase subunit beta [Leptotrichia buccalis C-1013-b] gi|257050967|gb|ACV40151.1| DNA gyrase, B subunit [Leptotrichia buccalis C-1013-b] Length = 660 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 14/72 (19%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT-------SEEIPMAVQ-RHC 76 E+++NS+D A ++ I G +++DNG G+ + + + H Sbjct: 41 EIVDNSVDEALAGICDKITVKILEGNI--IEVSDNGRGIPVGMHKTGKSTLEVVLTVLHA 98 Query: 77 TSKISDDFSNIH 88 K +D + Sbjct: 99 GGKFDNDNYKVS 110 >gi|150018817|ref|YP_001311071.1| signal transduction histidine kinase regulating citrate/malate metabolism [Clostridium beijerinckii NCIMB 8052] gi|149905282|gb|ABR36115.1| signal transduction histidine kinase regulating citrate/malate metabolism [Clostridium beijerinckii NCIMB 8052] Length = 524 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 5/64 (7%) Query: 21 ERPSIAIKELIENSLDA----ESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 E + LIENS+DA + + I + + DNG G+ Sbjct: 420 EELGSVVGNLIENSIDAAKNDGTGEIYMKIFEEDDQMKIMVKDNGCGIPDNIRNSIYNIG 479 Query: 76 CTSK 79 TSK Sbjct: 480 ITSK 483 >gi|194339107|gb|ACF49469.1| GyrB [Amycolatopsis saalfeldensis] Length = 455 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A ++RVE + A GG ++ D+G G+ + Sbjct: 4 VQEVVDNSVDEAMAGHATRVEVTLLADGG---VRVVDDGRGIPVD 45 >gi|190894939|ref|YP_001985232.1| heat shock protein 90 [Rhizobium etli CIAT 652] gi|190700600|gb|ACE94682.1| heat shock chaperone protein, Hsp90 family [Rhizobium etli CIAT 652] Length = 628 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 56/168 (33%), Gaps = 39/168 (23%) Query: 27 IKELIENSLDA---------------ES---SRVETVIAGGGKSFFQITDNGFGMTSEEI 68 ++ELI N+ DA S SR+ + + + DNG GM +E+ Sbjct: 37 LRELISNAADACEKLRYEAIEAPALLGSVAESRITLSLDDESRQLV-VEDNGIGMQRDEM 95 Query: 69 PMAV------------QRHCTSKISDDFSNIHTF--GFRGEALPSIGAVS-HLTLMSRPP 113 A+ R SK + I F GF S V+ + ++SR Sbjct: 96 IEALGTIARSGTRAFMDRIAASKAGEGAQLIGQFGVGF-----YSCFMVADRVDVISRRA 150 Query: 114 QNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSE 161 + A+ + G+ SV V + R + + + Sbjct: 151 GSEEAAKWSSDGKGSYSVAAVNLAEAPERGTRIVLHLMEDAKKYTSRW 198 >gi|171920906|ref|ZP_02932057.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|188524343|ref|ZP_03004375.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198273777|ref|ZP_03206311.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554526|ref|YP_002284909.1| DNA topoisomerase IV subunit B [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|171903123|gb|EDT49412.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|195659753|gb|EDX53133.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198249532|gb|EDY74314.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209542027|gb|ACI60256.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 10 str. ATCC 33699] Length = 642 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD----AESSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + V+ + I D+G G+ + Sbjct: 41 EIVDNSIDEVMNANAKNISVVLHED--NSISILDDGRGIPVD 80 >gi|134096626|ref|YP_001102287.1| DNA gyrase subunit B [Saccharopolyspora erythraea NRRL 2338] gi|291005720|ref|ZP_06563693.1| DNA gyrase subunit B [Saccharopolyspora erythraea NRRL 2338] gi|133909249|emb|CAL99361.1| DNA gyrase subunit B [Saccharopolyspora erythraea NRRL 2338] Length = 630 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A ++RVE + A GG ++ D+G G+ + Sbjct: 15 VQEVVDNSVDEAMAGYATRVEVTLLADGG---VRVVDDGRGIPVD 56 >gi|86159262|ref|YP_466047.1| DNA topoisomerase VI subunit B [Anaeromyxobacter dehalogenans 2CP-C] gi|85775773|gb|ABC82610.1| DNA topoisomerase VI, B subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 604 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 58/194 (29%), Gaps = 48/194 (24%) Query: 27 IKELIENSLDA--ESS---RVETVIAGGGKS--------------FFQITDNGFGMTSEE 67 IKE ++NSLDA E+ + + G + + DNG G+ + Sbjct: 34 IKEAVDNSLDACEEAGILPEITIEVRDLGLNDQGEGELTKGEGRFVVVVEDNGPGIVKAQ 93 Query: 68 IPMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVSHLT------LMSRPPQNNTG-- 118 P + SK + G +G + + LT ++SR + Sbjct: 94 APKIFGKLLYGSKFH---RLKQSRGQQGIGISAAAMYGQLTTGQPIRMISRTGKGKPAFG 150 Query: 119 ------AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVI 172 + GT VE+ + + Q + + Sbjct: 151 LEIQIDTRKNNPVVTAERQLDDWHEHGTRVELEIV-----------ANWQQGQRFVNRYV 199 Query: 173 RRMAIAYPKVSFTF 186 A++ P +F + Sbjct: 200 EHTALSNPHATFHY 213 >gi|260887491|ref|ZP_05898754.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185] gi|330837873|ref|YP_004412453.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185] gi|260862778|gb|EEX77278.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185] gi|329745637|gb|AEB98993.1| DNA gyrase, B subunit [Selenomonas sputigena ATCC 35185] Length = 690 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A ++ I + + DNG G+ + Sbjct: 98 VYEVVDNSIDEALAGYCDHIDVTIEKD--NSITVVDNGRGIPVD 139 >gi|106734195|gb|ABF82574.1| DNA topoisomerase IV subunit beta [uncultured bacterium] Length = 47 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ I G + + DNG+G+ + Sbjct: 5 EIVDNSIDEALAGYCDTIKVTIEPG--NSIMVEDNGWGIPVD 44 >gi|34541335|ref|NP_905814.1| DNA gyrase subunit B [Porphyromonas gingivalis W83] gi|188994277|ref|YP_001928529.1| DNA gyrase B subunit [Porphyromonas gingivalis ATCC 33277] gi|34397651|gb|AAQ66713.1| DNA gyrase, B subunit [Porphyromonas gingivalis W83] gi|188593957|dbj|BAG32932.1| DNA gyrase B subunit [Porphyromonas gingivalis ATCC 33277] Length = 654 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A VE +I + + DNG G+ + Sbjct: 48 VYEVVDNSIDEALAGYCDNVEVIIEED--NSITVRDNGRGIPVD 89 >gi|313677558|ref|YP_004055554.1| integral membrane sensor signal transduction histidine kinase [Marivirga tractuosa DSM 4126] gi|312944256|gb|ADR23446.1| integral membrane sensor signal transduction histidine kinase [Marivirga tractuosa DSM 4126] Length = 1216 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 5/52 (9%) Query: 33 NSLDAE----SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 N++ + + ++ I GK ITDNG G+ + + T+K Sbjct: 1123 NAIQSGDGSQAITIKIKIELLEGKIRISITDNGLGIPEDNYNKVFLPNFTTK 1174 >gi|158319256|ref|YP_001511763.1| histidine kinase [Alkaliphilus oremlandii OhILAs] gi|158139455|gb|ABW17767.1| histidine kinase [Alkaliphilus oremlandii OhILAs] Length = 584 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 5/61 (8%) Query: 23 PSIAIKELIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 I L+ N+LDA ++ G +I D G G+ E + T+ Sbjct: 473 LQQVILNLVTNALDAMPDGGKLTIKIRCE-GNLIKIEIIDTGEGILKENLKYVFDPFYTT 531 Query: 79 K 79 K Sbjct: 532 K 532 >gi|120401034|ref|YP_950863.1| DNA gyrase subunit B [Mycobacterium vanbaalenii PYR-1] gi|119953852|gb|ABM10857.1| DNA gyrase subunit B [Mycobacterium vanbaalenii PYR-1] Length = 675 Score = 46.2 bits (108), Expect = 0.015, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 8/41 (19%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 E+++N++D A +++V+ I GG Q+TD+G G+ Sbjct: 48 EVVDNAVDEAMAGFATKVDVRILEDGG---VQVTDDGRGIP 85 >gi|224372301|ref|YP_002606673.1| histidine kinase [Nautilia profundicola AmH] gi|223590038|gb|ACM93774.1| histidine kinase [Nautilia profundicola AmH] Length = 360 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 30 LIENSLDAESSRVETVIAGGGKSFFQI-TDNGFGMTSEEIPMAVQRHC 76 LIENS+ +S+++ ++ I DNG G+ E++P Sbjct: 262 LIENSIKYGASKIDIILKKEKNKIVLILKDNGIGIPKEKLPFIFDEFY 309 >gi|254427031|ref|ZP_05040738.1| DNA topoisomerase IV, B subunit [Alcanivorax sp. DG881] gi|196193200|gb|EDX88159.1| DNA topoisomerase IV, B subunit [Alcanivorax sp. DG881] Length = 628 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 8/50 (16%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A + ++ + GG ++ D+G GM + Sbjct: 31 RPNHLAQEVIDNSVDEALAGHAKSIKVTLLKDGG---VEVEDDGRGMPVD 77 >gi|161528428|ref|YP_001582254.1| histidine kinase [Nitrosopumilus maritimus SCM1] gi|160339729|gb|ABX12816.1| histidine kinase [Nitrosopumilus maritimus SCM1] Length = 505 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 26/60 (43%), Gaps = 5/60 (8%) Query: 22 RPSIAIKELIENSLDAESSR-----VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R S + +++N++D + + + + G++ I DNG G+ E ++ Sbjct: 398 RISQVVTNIVKNAVDFVPTTNGKIVISSDVTDDGQTLISIEDNGIGIPEEHHETVFEKFH 457 >gi|110835355|ref|YP_694214.1| DNA topoisomerase IV subunit B [Alcanivorax borkumensis SK2] gi|110648466|emb|CAL17942.1| DNA topoisomerase IV, B subunit [Alcanivorax borkumensis SK2] Length = 628 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 8/50 (16%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A + ++ + GG ++ D+G GM + Sbjct: 31 RPNHLAQEVIDNSVDEALAGHAKSIKVTLFKDGG---VEVEDDGRGMPVD 77 >gi|294676320|ref|YP_003576935.1| signal transduction histidine kinase HupT [Rhodobacter capsulatus SB 1003] gi|310270|gb|AAC32031.1| sensor-regulator protein [Rhodobacter capsulatus] gi|294475140|gb|ADE84528.1| signal transduction histidine kinase HupT [Rhodobacter capsulatus SB 1003] Length = 456 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 12/76 (15%) Query: 14 IAAGEIIERP---SIAIKELIENSLDA------ESSRVETVIA-GGGKSFFQITDNGFGM 63 +AA E+I RP + L++N+LDA R+ G+ ++D G G+ Sbjct: 335 LAALEVIGRPGHIQQVVMNLVQNALDAMGDFQDG--RIRIEARIAAGRGELVVSDTGPGV 392 Query: 64 TSEEIPMAVQRHCTSK 79 + P T+K Sbjct: 393 AEDVAPTIFDPFFTTK 408 >gi|325336741|gb|ADZ13015.1| Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Riemerella anatipestifer RA-GD] Length = 644 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + I G + + DNG G+ + Sbjct: 40 VYEVVDNSIDEALAGYCDTITVTIHEG--NAISVKDNGRGIPVD 81 >gi|313205819|ref|YP_004044996.1| DNA gyrase subunit b [Riemerella anatipestifer DSM 15868] gi|312445135|gb|ADQ81490.1| DNA gyrase subunit B [Riemerella anatipestifer DSM 15868] gi|315022785|gb|EFT35809.1| DNA gyrase subunit B [Riemerella anatipestifer RA-YM] Length = 644 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + I G + + DNG G+ + Sbjct: 40 VYEVVDNSIDEALAGYCDTITVTIHEG--NAISVKDNGRGIPVD 81 >gi|313204151|ref|YP_004042808.1| DNA gyrase subunit b [Paludibacter propionicigenes WB4] gi|312443467|gb|ADQ79823.1| DNA gyrase subunit B [Paludibacter propionicigenes WB4] Length = 654 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + ++ I + + DNG G+ + Sbjct: 49 VYEVVDNSIDEAMAGHCNNIQVFINEN--NSITVIDNGRGIPVD 90 >gi|209881618|ref|XP_002142247.1| hypothetical protein [Cryptosporidium muris RN66] gi|209557853|gb|EEA07898.1| hypothetical protein CMU_029730 [Cryptosporidium muris RN66] Length = 536 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 18/70 (25%) Query: 28 KELIENSLDAESSR-----------VETVI-------AGGGKSFFQITDNGFGMTSEEIP 69 KEL +NS+DA R ++ + + ++ D G G++ E I Sbjct: 30 KELFDNSMDACRKREHGQWGNLMPKIQVSVMYDYILDRNDPRLSIRVQDTGCGISLESID 89 Query: 70 MAVQRHCTSK 79 + TSK Sbjct: 90 LLGTLFGTSK 99 >gi|163787244|ref|ZP_02181691.1| two-component sensor histidine kinase, phosphate regulation [Flavobacteriales bacterium ALC-1] gi|159877132|gb|EDP71189.1| two-component sensor histidine kinase, phosphate regulation [Flavobacteriales bacterium ALC-1] Length = 347 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 8/62 (12%) Query: 21 ERPSIAIKELIENSL----DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 ER + LI NS+ + ++ + I K+ ++TDNG G+ + +R Sbjct: 237 ERIQQVLTNLIVNSIKYGREQGTTEISIENLIKN--KAIIRVTDNGEGIAKANLQRLFER 294 Query: 75 HC 76 Sbjct: 295 FY 296 >gi|115381176|gb|ABI96237.1| DNA gyrase subunit B [Spiroplasma insolitum] Length = 559 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++++ I +TDNG G+ E Sbjct: 14 EVVDNSIDEVLANFANKITITINKD--ESITVTDNGRGIPIE 53 >gi|85374021|ref|YP_458083.1| DNA topoisomerase IV subunit B [Erythrobacter litoralis HTCC2594] gi|84787104|gb|ABC63286.1| topoisomeraseB subunit [Erythrobacter litoralis HTCC2594] Length = 658 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 6/48 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 + E+++N++D A +SR+ + G + + DNG G+ +E P Sbjct: 50 VAEVLDNAMDEAVAGHASRIAITLEEG--NTVSVADNGRGIPVDEHPK 95 >gi|328876798|gb|EGG25161.1| hypothetical protein DFA_03409 [Dictyostelium fasciculatum] Length = 2186 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 17/75 (22%) Query: 14 IAAGEIIERPSIAIKELIENSLDAESSR--------VETVIAG---GGKSFFQITDNGFG 62 + AG A+ E I+NS+ +++R ++ I S I DNG G Sbjct: 221 LKAGTSEYNLPNAVAEFIDNSI--QATRNNDFSDKHIKITIKKPDHNNISSIIIWDNGSG 278 Query: 63 MTSEEIPMAVQRHCT 77 M EE+ QR T Sbjct: 279 MNKEEL----QRWAT 289 >gi|310778432|ref|YP_003966765.1| histidine kinase [Ilyobacter polytropus DSM 2926] gi|309747755|gb|ADO82417.1| histidine kinase [Ilyobacter polytropus DSM 2926] Length = 553 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 5/58 (8%) Query: 23 PSIAIKELIENSL---DAESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 + +K LIEN++ D + + I + I DNG G+ E+I +R Sbjct: 448 LTTILKNLIENAIIYNDKKP-VIRVEIKEIYDRYKMVIEDNGLGIPEEDIENIFERFY 504 >gi|229163774|ref|ZP_04291718.1| Sensor histidine kinase [Bacillus cereus R309803] gi|228619667|gb|EEK76549.1| Sensor histidine kinase [Bacillus cereus R309803] Length = 307 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ E+IP + T+K Sbjct: 216 LIKNAIEAMSIGGTITIKVTVEDG--IIVQVKDEGCGIPKEKIPKLNEAFYTTK 267 >gi|281421771|ref|ZP_06252770.1| sensor histidine kinase [Prevotella copri DSM 18205] gi|281404266|gb|EFB34946.1| sensor histidine kinase [Prevotella copri DSM 18205] Length = 388 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Query: 26 AIKELIENSLDA-ESS--RVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 ++ L +N++DA ++ ++ + K+ +++D G G+ +++ + T+K Sbjct: 288 VVENLSKNAVDAMGANGGQITLHVEETDDKAIIEVSDTGNGIRKKDLKNVFRPGFTTK 345 >gi|323698745|ref|ZP_08110657.1| integral membrane sensor signal transduction histidine kinase [Desulfovibrio sp. ND132] gi|323458677|gb|EGB14542.1| integral membrane sensor signal transduction histidine kinase [Desulfovibrio desulfuricans ND132] Length = 558 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 32/90 (35%) Query: 6 LSEKI------INQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDN 59 L + NQI ++I L+EN++DA ++ G + TD+ Sbjct: 431 LDPDLPLITTDANQI--QQVILN-------LLENAIDA----ID---RDGQITVITRTDD 474 Query: 60 ----------GFGMTSEEIPMAVQRHCTSK 79 G G+ E + T+K Sbjct: 475 MGVVLNIADSGPGIPKEYLAKVFDPFFTTK 504 >gi|47779376|gb|AAT38605.1| predicted topoisomerase IV subunit B [uncultured gamma proteobacterium eBACHOT4E07] Length = 630 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 105/247 (42%), Gaps = 30/247 (12%) Query: 23 PSIAIKELIENSLD-A---ESSRVETVIAGGGKSFFQITDNGFGMTSE----------EI 68 P+ I+E+++NS+D A + ++ I G F ++D+G GM + E+ Sbjct: 33 PNHLIQEVLDNSVDEAISGHCTNIKIKIQKDG--FINVSDDGRGMPVDIHPEHKLSGVEL 90 Query: 69 PMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKI 128 + + H +K S D N + G G + + A+S +L +++ ++ S Sbjct: 91 IL-CKLHAGAKFSGDEYN-FSGGLHGVGVSVVNALSE-SLQVNIKRDSKEHEMRFSNGDK 147 Query: 129 SSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFST 188 + V + G + F ++ +S++++TN + +++ A+ P ++ Sbjct: 148 KNELKVVGDVGLRNTGTSIKFKPNP--DYFESDKIKTNELKHLLKAKAVLCPGLTI-DFH 204 Query: 189 IKSNRYKMNFQSTNG------NFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTF 242 +S + K+ + +G + + I ++ E +++ +++ + +T P Sbjct: 205 DESKKEKIKWFYEDGLKSYLEDQSDGIDLILSESIVSSNSSKDQEVEFVIN--WTSKPYK 262 Query: 243 NRGNANQ 249 N+ + Sbjct: 263 NKLDETY 269 >gi|15805770|ref|NP_294467.1| sensor histidine kinase [Deinococcus radiodurans R1] gi|6458453|gb|AAF10322.1|AE001930_3 sensor histidine kinase [Deinococcus radiodurans R1] Length = 566 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 3/59 (5%) Query: 21 ERPSIAIKELIENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 +R I L+ N+L A + V G + + D+G G+ +E + R Sbjct: 447 DRLRQVIINLVGNALKAGAKTVTLESSSQEEGREVRLSVRDDGPGIPAEHLSRLFDRFY 505 >gi|117927216|ref|YP_871767.1| DNA gyrase subunit B [Acidothermus cellulolyticus 11B] gi|117647679|gb|ABK51781.1| DNA gyrase subunit B [Acidothermus cellulolyticus 11B] Length = 666 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AES-SRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 + E+++N++D A + R++ + A GG ++ DNG G+ +E P Sbjct: 47 VYEVVDNAVDEALAGACDRIDVTLLADGG---VRVVDNGRGIPVDEHP 91 >gi|322376370|ref|ZP_08050863.1| DNA gyrase, B subunit [Streptococcus sp. M334] gi|321282177|gb|EFX59184.1| DNA gyrase, B subunit [Streptococcus sp. M334] Length = 648 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ ++ I + + D+G G+ + Sbjct: 49 EIVDNSIDEALAGFANHIQVFIEPD--NSITVVDDGRGIPVD 88 >gi|307825807|ref|ZP_07656023.1| histidine kinase [Methylobacter tundripaludum SV96] gi|307733115|gb|EFO03976.1| histidine kinase [Methylobacter tundripaludum SV96] Length = 144 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 24/51 (47%) Query: 18 EIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEI 68 E I A+ EL +N+ DA + V I G I D+G GM+ EE Sbjct: 20 EQIADCPTAVSELWKNAYDAYAREVALHIFDGEVPIAAIVDDGHGMSREEF 70 >gi|299147112|ref|ZP_07040179.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_23] gi|298514997|gb|EFI38879.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_23] Length = 652 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E +I + + DNG G+ + Sbjct: 47 VYEIVDNSIDEALAGYCDHIEVIINED--NSITVQDNGRGIPVD 88 >gi|295979445|dbj|BAJ07395.1| DNA gyrase subunit B [Rhodopseudomonas palustris] Length = 305 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A ++RVE ++ G + D+G G+ + Sbjct: 12 VYEVVDNAIDEALAGHATRVEVILNADG--SVTVRDDGRGIPVD 53 >gi|295979443|dbj|BAJ07394.1| DNA gyrase subunit B [Rhodopseudomonas palustris] gi|295979447|dbj|BAJ07396.1| DNA gyrase subunit B [Rhodopseudomonas palustris] Length = 304 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A ++RVE ++ G + D+G G+ + Sbjct: 12 VYEVVDNAIDEALAGHATRVEVILNADG--SVTVRDDGRGIPVD 53 >gi|225550647|ref|ZP_03771596.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225379801|gb|EEH02163.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 245 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD----AESSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + V+ + I D+G G+ + Sbjct: 41 EIVDNSIDEVMNANAKNISVVLHED--NSISILDDGRGIPVD 80 >gi|115375741|ref|ZP_01462994.1| two-component sensor histidine kinase [Stigmatella aurantiaca DW4/3-1] gi|310824108|ref|YP_003956466.1| sensor protein [Stigmatella aurantiaca DW4/3-1] gi|115367215|gb|EAU66197.1| two-component sensor histidine kinase [Stigmatella aurantiaca DW4/3-1] gi|309397180|gb|ADO74639.1| Sensor protein [Stigmatella aurantiaca DW4/3-1] Length = 631 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 5/60 (8%) Query: 21 ERPSIAIKELIENSLD---AESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHC 76 +R + L+EN+ A + + + GG + D+G G+ + QR Sbjct: 384 DRLEQVLVNLLENAHKYSPAGA-PITVEVEEGGDEARIHVKDHGIGIPGADQAQVFQRFY 442 >gi|238763429|ref|ZP_04624392.1| Sensor kinase dpiB [Yersinia kristensenii ATCC 33638] gi|238763510|ref|ZP_04624472.1| Sensor kinase dpiB [Yersinia kristensenii ATCC 33638] gi|238698292|gb|EEP91047.1| Sensor kinase dpiB [Yersinia kristensenii ATCC 33638] gi|238698373|gb|EEP91127.1| Sensor kinase dpiB [Yersinia kristensenii ATCC 33638] Length = 558 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 11/79 (13%) Query: 23 PSIAIKELIENSLDA------ESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRH 75 + + L++N+ +A +VE ++ G ++ D+G G+ + +R Sbjct: 452 LAAIVGNLLDNAFEASLKNPEGDKQVEIYLSDEGDDVILEVADHGCGIDPQLQDSLFERG 511 Query: 76 CTSKISDD----FSNIHTF 90 +SK SD+ + T+ Sbjct: 512 ASSKNSDEHGIGLYLVATY 530 >gi|116253167|ref|YP_769005.1| C4-dicarboxylate transport two-component sensor histidine kinase transcriptional regulatory protein [Rhizobium leguminosarum bv. viciae 3841] gi|115257815|emb|CAK08913.1| putative C4-dicarboxylate transport two-component sensor histidine kinase transcriptional regulatory protein [Rhizobium leguminosarum bv. viciae 3841] Length = 622 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 24/102 (23%) Query: 12 NQIAAGEIIERPSIAIKELIENSLDAES-----SRVETVIA-GGGKSFFQITDNGFGMTS 65 N+I R + L++N+L+A + RVE + G + DNG G+ Sbjct: 516 NRI-------RLEQVLINLLQNALEAVAPKAGEGRVEIRTSTDAGMVTVTVADNGPGIPP 568 Query: 66 EEIPMAVQRHCTSK---------ISDDFSNIHTFGFRGEALP 98 E TSK IS D + +G R E L Sbjct: 569 EIRKGLFTPFNTSKESGLGLGLVISKDI--VGDYGGRMEVLS 608 >gi|120404639|ref|YP_954468.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium vanbaalenii PYR-1] gi|119957457|gb|ABM14462.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium vanbaalenii PYR-1] Length = 379 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 24/91 (26%) Query: 22 RPSIAIKELIENSL-----------DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 R + I L++N+L DA + G+ + DNG G+ +E +P Sbjct: 267 RLAQVIGNLLDNALRHTPARGRVEVDAAAK--------PGEVIITVGDNGDGIAAEHLPH 318 Query: 71 AVQRHCTSKISDDFSNIHTFGFRGEALPSIG 101 +R D + + G G L I Sbjct: 319 VFERFY----RADVARDRSHGGAGIGLA-IA 344 >gi|262382739|ref|ZP_06075876.1| two-component system sensor histidine kinase/response regulator [Bacteroides sp. 2_1_33B] gi|262295617|gb|EEY83548.1| two-component system sensor histidine kinase/response regulator [Bacteroides sp. 2_1_33B] Length = 916 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%) Query: 38 ESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 S R+E GG+ F ++ D G G+ +P R T Sbjct: 546 GSVRIELT-EEGGRVFIRVIDTGSGIRPANLPHLFDRFYT 584 >gi|296127762|ref|YP_003635014.1| DNA gyrase, B subunit [Brachyspira murdochii DSM 12563] gi|296019578|gb|ADG72815.1| DNA gyrase, B subunit [Brachyspira murdochii DSM 12563] Length = 637 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 20/44 (45%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + I ++ D+G G+ + Sbjct: 42 VYEVVDNSIDEAMAGYCKNITVTIEKDNI--IKVEDDGRGIPVD 83 >gi|254390879|ref|ZP_05006090.1| DNA topoisomerase II [Streptomyces clavuligerus ATCC 27064] gi|294816152|ref|ZP_06774795.1| DNA topoisomerase II [Streptomyces clavuligerus ATCC 27064] gi|326444485|ref|ZP_08219219.1| putative DNA gyrase B subunit [Streptomyces clavuligerus ATCC 27064] gi|197704577|gb|EDY50389.1| DNA topoisomerase II [Streptomyces clavuligerus ATCC 27064] gi|294328751|gb|EFG10394.1| DNA topoisomerase II [Streptomyces clavuligerus ATCC 27064] Length = 643 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 16/92 (17%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + EL++N++D A + + G +TD+G G+ ++ P A Sbjct: 39 VLELVDNAVDEAAAGHCGAISVELYDDG--SCSVTDDGRGIPTDPHPAAGVPACELVLTT 96 Query: 75 -HCTSKISDDFSNIHTFGFRGEALPSIGAVSH 105 H K DD S + G G L + A+S Sbjct: 97 LHSGGKF-DDSSYATSAGLHGVGLACVNALSE 127 >gi|167043616|gb|ABZ08310.1| putative DNA gyrase B [uncultured marine microorganism HF4000_APKG2M17] Length = 655 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A ++ +I G I DNG G+ + Sbjct: 53 VNEVVDNSIDEALAGHCDAIDVIIHEDG--SISIKDNGRGIPVD 94 >gi|119475370|ref|ZP_01615723.1| DNA topoisomerase IV, B subunit [marine gamma proteobacterium HTCC2143] gi|119451573|gb|EAW32806.1| DNA topoisomerase IV, B subunit [marine gamma proteobacterium HTCC2143] Length = 627 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 75/215 (34%), Gaps = 24/215 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP------- 69 RP+ +E+I+NS+D A + +++ ++ G +D+G GM + P Sbjct: 29 TRPNHLAQEVIDNSVDEALAGFAHQIDVIMHKDG--SLTCSDDGRGMPVDMHPEQKKPGV 86 Query: 70 --MAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAI-SG 125 + H K + D + G G + + A+S L + R + Sbjct: 87 EVILTTLHAGGKFNSDNYQ-FSGGLHGVGVSVVNALSKLLEITIRRDGEVYKMEFKNGDK 145 Query: 126 EKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFT 185 K V T +R ++ S + + V+R A+ P + T Sbjct: 146 SKDLEVIDSCGKRNTGTSIR-----FTPDGSYFDSAKFSVARMKHVLRAKAVLCPGLRVT 200 Query: 186 FSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINN 220 +++ K + +G ++ G + + Sbjct: 201 C-LDEASGEKEEWHYEDGLRDYMVASTHGWETLPK 234 >gi|19909707|dbj|BAB87049.1| DNA gyrase subunit B [Pseudomonas sp. Tol5] Length = 289 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 71/247 (28%), Gaps = 26/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 11 EVVDNSIDEALAGHCDDISIIIHPD--ESITVKDNGRGIPVDVHKEEGVSAAEVIMTVLH 68 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+S L L R + + Sbjct: 69 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEELVLTVRRSG--KIWEQTYVHGVPQEPMKI 125 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 + T A K+ +++ IR ++ V +S + Sbjct: 126 VGDSETTGTQIHF----KASSETFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKE 181 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 ++ G + + N V E + + N F Sbjct: 182 ELFKY--EGGLRAFVEYLNTNKTPVNQVFHFNIQREDGIGVEIALQW-NDSFNENLLCFT 238 Query: 255 NGRTVQD 261 N +D Sbjct: 239 NNIPQRD 245 >gi|330821406|ref|YP_004350268.1| integral membrane sensor signal transduction histidine kinase [Burkholderia gladioli BSR3] gi|327373401|gb|AEA64756.1| integral membrane sensor signal transduction histidine kinase [Burkholderia gladioli BSR3] Length = 475 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 10/69 (14%) Query: 18 EIIER---PSIAIKELIENSL----DAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 E++ R + I L++N++ D + V I GG + + D+G G+ S+E Sbjct: 348 EVVARADLLADLIGNLVDNAIRYAGD-GA-VVTVRIGREGGHARLDVIDDGPGIASQERE 405 Query: 70 MAVQRHCTS 78 +R S Sbjct: 406 AVFERFYRS 414 >gi|332162978|ref|YP_004299555.1| DNA topoisomerase IV subunit B [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318604198|emb|CBY25696.1| topoisomerase IV subunit B [Yersinia enterocolitica subsp. palearctica Y11] gi|325667208|gb|ADZ43852.1| DNA topoisomerase IV subunit B [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862268|emb|CBX72429.1| DNA topoisomerase 4 subunit B [Yersinia enterocolitica W22703] Length = 631 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 71/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + R++ ++ ++ D+G GM EE + Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHAHRIDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 89 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDSQIYSIAFENGDK 147 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--F 184 + ++F S + + ++ +++ A+ P V F Sbjct: 148 VQELQVIGTCGKRNTGTSVHFW----PDVSFFDSPRFSVSRLSHLLKAKAVLCPGVEIVF 203 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 + + E ++ + Sbjct: 204 KDQVNNTEQRWCYADGLTDYLMEAVNGL 231 >gi|303229809|ref|ZP_07316589.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Veillonella atypica ACS-134-V-Col7a] gi|302515569|gb|EFL57531.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Veillonella atypica ACS-134-V-Col7a] Length = 467 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 5/70 (7%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFF-QITDNGFGMT 64 + +I I E+ A+ LI+N++ S + ++TDNG G+ Sbjct: 344 IDSDLI--ITGHEV--SLRRAVTNLIDNAIKFTKSTINITAKRNNLYLIIEVTDNGIGIE 399 Query: 65 SEEIPMAVQR 74 + + R Sbjct: 400 PDNLSQIFNR 409 >gi|262370827|ref|ZP_06064151.1| topoisomerase IV subunit B [Acinetobacter johnsonii SH046] gi|262314189|gb|EEY95232.1| topoisomerase IV subunit B [Acinetobacter johnsonii SH046] Length = 626 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+N++D A ++++ + G + DNG GM + Sbjct: 29 TRPNHLAQEVIDNAVDEALAGHANKITVTVYKDG--SLSVEDNGRGMPVD 76 >gi|261819682|ref|YP_003257788.1| DNA topoisomerase IV subunit B [Pectobacterium wasabiae WPP163] gi|261603695|gb|ACX86181.1| DNA topoisomerase IV, B subunit [Pectobacterium wasabiae WPP163] Length = 631 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 77/211 (36%), Gaps = 29/211 (13%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + R++ ++ ++ D+G GM EE + Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHARRIDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAIS 124 + + R H K S + G G + + A+S + + R + + Sbjct: 89 ELILCRLHAGGKFSGKNYQ-FSGGLHGVGISVVNALSTRVEVTVRRDGQVYDIAFENGDK 147 Query: 125 GEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 ++++ N GT V F S + + +T +++ A+ P V Sbjct: 148 VQELTVTGTCGRRNTGTRVHFW-------PDETFFDSARFSVSRLTHLLKAKAVLCPGVE 200 Query: 184 --FTFSTIKSNRYKMNFQSTNGNFPERISQV 212 F + + N E I+ + Sbjct: 201 IVFKDKVNNTEQRWCYQDGLNDYLCEAINGL 231 >gi|257068118|ref|YP_003154373.1| histidine kinase [Brachybacterium faecium DSM 4810] gi|256558936|gb|ACU84783.1| histidine kinase [Brachybacterium faecium DSM 4810] Length = 415 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 5/50 (10%) Query: 30 LIENSL---DAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRH 75 LI N++ DA +R+ + GG + D G G+ + + +R Sbjct: 278 LISNAISYSDAR-TRIGVAVRRDGGMVEISVKDQGIGIAKDHLERVFERF 326 >gi|261856340|ref|YP_003263623.1| DNA topoisomerase IV subunit beta [Halothiobacillus neapolitanus c2] gi|261836809|gb|ACX96576.1| DNA topoisomerase IV, B subunit [Halothiobacillus neapolitanus c2] Length = 638 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 20/87 (22%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EI 68 RP+ +E+I+NS+D + +SR++ V+ G +TD+G GM + + Sbjct: 35 TRPNHLAQEVIDNSVDEAVSGFASRIDVVLHADG--SLSVTDDGRGMPVDIHPEHGVTGV 92 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRG 94 + + R H K SD T+ F G Sbjct: 93 ELILTRLHAGGKFSD-----KTYRFSG 114 >gi|149277244|ref|ZP_01883386.1| two-component sensor histidine kinase, phosphate regulation [Pedobacter sp. BAL39] gi|149232121|gb|EDM37498.1| two-component sensor histidine kinase, phosphate regulation [Pedobacter sp. BAL39] Length = 341 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 5/51 (9%) Query: 30 LIENSL----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 LI+NSL D S+ ++ + ++TD+G G+ + +P +R Sbjct: 241 LIQNSLKYGKDHGSTAIKI-FELHDQYLVEVTDDGIGIDEKHLPRLFERFY 290 >gi|123443845|ref|YP_001007816.1| DNA topoisomerase IV subunit B [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090806|emb|CAL13688.1| topoisomerase IV subunit B [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 631 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 71/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + R++ ++ ++ D+G GM EE + Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHAHRIDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 89 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDSQIYSIAFENGDK 147 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--F 184 + ++F S + + ++ +++ A+ P V F Sbjct: 148 VQELQVIGTCGKRNTGTSVHFW----PDVSFFDSPRFSVSRLSHLLKAKAVLCPGVEIVF 203 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 + + E ++ + Sbjct: 204 KDQVNNTEQRWCYADGLTDYLMEAVNGL 231 >gi|313500371|gb|ADR61737.1| Integral membrane sensor signal transduction histidine kinase [Pseudomonas putida BIRD-1] Length = 585 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA R+E I G + D+G G+ ++ Sbjct: 476 RLEQVLINLLHNALDAMLDKRYKRLEIRIEPDGELWRLSVLDSGGGIAEADLAKVFDPFF 535 Query: 77 TSK 79 T+K Sbjct: 536 TTK 538 >gi|239622759|ref|ZP_04665790.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239514756|gb|EEQ54623.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 494 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Query: 22 RPSIAIKELIENSLDAESSRVETVIAGGGKS-FFQITDNGFGMTS 65 + A+ ++I+NS+ A ++++ + G G+ + I DNG GM+ Sbjct: 22 DLNTAVADIIDNSIAANATKISILYFGQGEEPYIAIVDNGNGMSE 66 >gi|121893|sp|P13364|GYRB_PSEPU RecName: Full=DNA gyrase subunit B gi|45694|emb|CAA38447.1| unnamed protein product [Pseudomonas putida] Length = 806 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 70/247 (28%), Gaps = 25/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDITVIIHTD--ESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+S L L R + + V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKLVLTVRRSG--KIWEQTYVHGVPQAPMAV 158 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 T K+ +++ IR ++ V +S + Sbjct: 159 VGESETT----GTHIHFKPSAETFKNIHFSWDILAKRIRELSFLNSGVGILLKDERSGKE 214 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 + F G + + N+ + G +N F Sbjct: 215 E--FFKYEGGLRAFVEYLNTNKTPVNSQVFHFSVQREDGVGVEVALQWNDSFNENLLCFT 272 Query: 255 NGRTVQD 261 N +D Sbjct: 273 NNIPQRD 279 >gi|148549526|ref|YP_001269628.1| integral membrane sensor signal transduction histidine kinase [Pseudomonas putida F1] gi|148513584|gb|ABQ80444.1| integral membrane sensor signal transduction histidine kinase [Pseudomonas putida F1] Length = 585 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA R+E I G + D+G G+ ++ Sbjct: 476 RLEQVLINLLHNALDAMLDKRYKRLEIRIEPDGELWRLSVLDSGGGIAEADLAKVFDPFF 535 Query: 77 TSK 79 T+K Sbjct: 536 TTK 538 >gi|296270359|ref|YP_003652991.1| DNA topoisomerase [Thermobispora bispora DSM 43833] gi|296093146|gb|ADG89098.1| DNA topoisomerase (ATP-hydrolyzing) [Thermobispora bispora DSM 43833] Length = 690 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N++D + +R+E + G ++ DNG G+ + Sbjct: 46 EIVDNAVDEALSGYCTRIEVELYPDG--SIEVRDNGRGIPVD 85 >gi|226226219|ref|YP_002760325.1| DNA gyrase subunit B [Gemmatimonas aurantiaca T-27] gi|226089410|dbj|BAH37855.1| DNA gyrase subunit B [Gemmatimonas aurantiaca T-27] Length = 658 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + RVE I + D+G G+ + Sbjct: 50 VYEVVDNSIDEALAGFAKRVEVTIHAD--DSISVEDDGRGIPVD 91 >gi|225874303|ref|YP_002755762.1| DNA gyrase, B subunit [Acidobacterium capsulatum ATCC 51196] gi|225791292|gb|ACO31382.1| DNA gyrase, B subunit [Acidobacterium capsulatum ATCC 51196] Length = 870 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 6/45 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEE 67 + E+++NS+D A ++R+E I + + D+G G+ +E Sbjct: 57 VYEVVDNSVDEALAGYATRIEVTIHVD--NSITVVDDGRGIPVDE 99 >gi|217970016|ref|YP_002355250.1| histidine kinase [Thauera sp. MZ1T] gi|217507343|gb|ACK54354.1| histidine kinase [Thauera sp. MZ1T] Length = 689 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 9/61 (14%) Query: 15 AAGEI-I----ERPSIAIKELIENSLDAESS--RVETVIAGG--GKSFFQITDNGFGMTS 65 AAG + + +R I +++N+LDA + +V +A G G++ + D+G GM+ Sbjct: 562 AAGPVEVSAHPQRLERIIGHVVQNALDATAQDGKVVLSLAAGKDGRANVVVEDDGCGMSP 621 Query: 66 E 66 E Sbjct: 622 E 622 >gi|28569045|gb|AAO47226.1|AF205853_2 DNA gyrase subunit B [Streptomyces rishiriensis] Length = 702 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AES-SRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A + +E ++ G ++TDNG G+ + Sbjct: 55 EIIDNSVDEALAGACDHIEVILHDDG--SVEVTDNGRGIPVD 94 >gi|33594717|ref|NP_882361.1| putative sensor kinase protein [Bordetella pertussis Tohama I] gi|33598903|ref|NP_886546.1| putative sensor kinase protein [Bordetella parapertussis 12822] gi|33564793|emb|CAE44121.1| putative sensor kinase protein [Bordetella pertussis Tohama I] gi|33575033|emb|CAE39699.1| putative sensor kinase protein [Bordetella parapertussis] gi|332384128|gb|AEE68975.1| putative sensor kinase protein [Bordetella pertussis CS] Length = 487 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Query: 30 LIENSL--DAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 L++N++ A S V + A GG ++ + DNG GM++E+I A R Sbjct: 375 LVDNAIRYTARGSEVTVKVHAEGGHAWLVVEDNGPGMSAEDIARASVRF 423 >gi|33603982|ref|NP_891542.1| putative sensor kinase protein [Bordetella bronchiseptica RB50] gi|33568958|emb|CAE35372.1| putative sensor kinase protein [Bordetella bronchiseptica RB50] Length = 471 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Query: 30 LIENSL--DAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 L++N++ A S V + A GG ++ + DNG GM++E+I A R Sbjct: 359 LVDNAIRYTARGSEVTVKVHAEGGHAWLVVEDNGPGMSAEDIARASVRF 407 >gi|86130994|ref|ZP_01049593.1| two-component system sensor histidine kinase [Dokdonia donghaensis MED134] gi|85818405|gb|EAQ39565.1| two-component system sensor histidine kinase [Dokdonia donghaensis MED134] Length = 482 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 28/59 (47%), Gaps = 5/59 (8%) Query: 26 AIKELIENSLDAESS----RVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 + L++N++ A + ++ + +TDNG G++ + +PM + T+K Sbjct: 384 VVTNLVKNAVQATKTTEDPKILVEVNDLDAQVEITVTDNGTGISEDNLPMIFEPKFTTK 442 >gi|307942170|ref|ZP_07657521.1| periplasmic sensor Signal transduction histidine kinase [Roseibium sp. TrichSKD4] gi|307774456|gb|EFO33666.1| periplasmic sensor Signal transduction histidine kinase [Roseibium sp. TrichSKD4] Length = 515 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 14/74 (18%) Query: 19 IIERP---SIAIKELIENSL-------DAESSRVETVIAGG--GKSFFQITDNGFGMTSE 66 ++ P S + L+EN++ DA V G + D+G G++ Sbjct: 393 VVSYPGAISQIVTNLVENAVKHGYEGQDAG--EVTVSSRKNHDGAIIIECNDDGCGISDG 450 Query: 67 EIPMAVQRHCTSKI 80 + + T+K Sbjct: 451 NLKRLFEPFFTTKF 464 >gi|297622932|ref|YP_003704366.1| integral membrane sensor signal transduction histidine kinase [Truepera radiovictrix DSM 17093] gi|297164112|gb|ADI13823.1| integral membrane sensor signal transduction histidine kinase [Truepera radiovictrix DSM 17093] Length = 443 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 18/92 (19%) Query: 4 RKLS-EKIINQIA------------AGEII---ERPSIAIKELIENSLDA-ESSRVETVI 46 + L ++ +IA A E+ ER + + L+ N++ A + V + Sbjct: 284 QVLDLSAVVRRIAREYPGVALGALPAAEVAGSPERLAQLTRNLVRNAVQAAGAEGVTLEL 343 Query: 47 AGGGKSFF-QITDNGFGMTSEEIPMAVQRHCT 77 G + D G G+ EE+P +R T Sbjct: 344 TAGADEVVLTVADRGPGVPPEELPHLFERFYT 375 >gi|291320111|ref|YP_003515369.1| topoisomerase IV subunit B [Mycoplasma agalactiae] gi|290752440|emb|CBH40411.1| Topoisomerase IV subunit B [Mycoplasma agalactiae] Length = 641 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 29/66 (43%), Gaps = 14/66 (21%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT-------SEEIPMAV-QRHC 76 E+++NS+D A ++ + ++ G ++DNG G+ + + + H Sbjct: 45 EIVDNSIDEALAGEANEIIVILKKDG--SVIVSDNGRGIPVGKTPSGKSAVELVFTELHA 102 Query: 77 TSKISD 82 K ++ Sbjct: 103 GGKFNE 108 >gi|225551164|ref|ZP_03772110.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225378979|gb|EEH01344.1| DNA topoisomerase IV, B subunit [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 270 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD----AESSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + V+ + I D+G G+ + Sbjct: 41 EIVDNSIDEVMNANAKNISVVLHED--NSISILDDGRGIPVD 80 >gi|167031027|ref|YP_001666258.1| DNA gyrase subunit B [Pseudomonas putida GB-1] gi|166857515|gb|ABY95922.1| DNA gyrase, B subunit [Pseudomonas putida GB-1] Length = 806 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 71/247 (28%), Gaps = 25/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDITVIIHTD--ESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+S L L R + + V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKLVLTVRRSG--KIWEQTYVHGVPQAPMAV 158 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 + T K+ +++ IR ++ V +S + Sbjct: 159 VGDSETT----GTHIHFKPSAETFKNIHFSWDILAKRIRELSFLNSGVGILLKDERSGKE 214 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 + F G + + N+ + G +N F Sbjct: 215 E--FFKYEGGLRAFVEYLNTNKTPVNSQVFHFNVQRDDGVGVEVALQWNDSFNENLLCFT 272 Query: 255 NGRTVQD 261 N +D Sbjct: 273 NNIPQRD 279 >gi|58617165|ref|YP_196364.1| DNA gyrase subunit B [Ehrlichia ruminantium str. Gardel] gi|58416777|emb|CAI27890.1| DNA gyrase subunit B [Ehrlichia ruminantium str. Gardel] Length = 798 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+I+NS+D A ++++ +I G + DNG G+ + Sbjct: 39 VYEVIDNSIDEALAGFCNKIDIIIQNDG--SVSVIDNGRGIPVD 80 >gi|296163367|ref|ZP_06846125.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] gi|295886399|gb|EFG66259.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] Length = 808 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 11/76 (14%) Query: 6 LSEKIINQI---AAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 L +II+ I AG AI EL+ NS+DA ++ V + G F+ +D+G G Sbjct: 7 LDPQIIHHIIYSQAG----SIGKAIIELLMNSVDARATAVRLSMTKEG---FECSDDGNG 59 Query: 63 M-TSEEIPMAVQRHCT 77 + E++ R T Sbjct: 60 FASREDVIRYFGRFGT 75 >gi|26989125|ref|NP_744550.1| integral membrane sensor signal transduction histidine kinase [Pseudomonas putida KT2440] gi|24983959|gb|AAN68014.1|AE016434_5 sensor histidine kinase, putative [Pseudomonas putida KT2440] Length = 428 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 21 ERPSI---AIKELIENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 RP + L++N+L A ++ ++ G + ++ DNG G+ +E+ ++ Sbjct: 322 TRPHALRRVLVNLVDNALKFAGAAELQVS-REGSTTIIRVLDNGPGIPVDELDEVLKPFY 380 >gi|57239156|ref|YP_180292.1| DNA gyrase subunit B [Ehrlichia ruminantium str. Welgevonden] gi|58579107|ref|YP_197319.1| DNA gyrase subunit B [Ehrlichia ruminantium str. Welgevonden] gi|57161235|emb|CAH58151.1| DNA gyrase subunit B [Ehrlichia ruminantium str. Welgevonden] gi|58417733|emb|CAI26937.1| DNA gyrase subunit B [Ehrlichia ruminantium str. Welgevonden] Length = 798 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+I+NS+D A ++++ +I G + DNG G+ + Sbjct: 39 VYEVIDNSIDEALAGFCNKIDIIIQNDG--SVSVIDNGRGIPVD 80 >gi|332641361|gb|AEE74882.1| DNA gyrase subunit B [Arabidopsis thaliana] Length = 772 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 43/258 (16%), Positives = 84/258 (32%), Gaps = 43/258 (16%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH-CTSKIS 81 + E+++N++D A +S+++ V+ I+DNG G+ ++ H T K Sbjct: 133 VYEILDNAIDEAQAGFASKIDVVLHSD--DSVSISDNGRGI-PTDL------HPATGK-- 181 Query: 82 DDFSNIHTF------------------GFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIA 122 + T G G L + A+S L ++ R + + Sbjct: 182 SSLETVLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDGMEFQQKYS 241 Query: 123 ISGEKISSVRPVAMN--PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + V GT + P + F + Q + N I IR +A P Sbjct: 242 RGKPVTTLTCHVLPPESRGTQGTCIRFW---PDKEVFTTAIQFDHNTIAGRIRELAFLNP 298 Query: 181 KVSFTFSTIKSN--RYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTG 238 KV+ + + R + G E +S + + + V K Sbjct: 299 KVTISLKKEDDDPERDVYSEYFYAGGLTEYVSWLNTDKKPLHDVLGFRKEIN-GSTVDVS 357 Query: 239 IPTFNRGNANQFYVFING 256 + + ++ + N Sbjct: 358 LQWCSDAYSDTMLGYANS 375 >gi|237798671|ref|ZP_04587132.1| sensor histidine kinase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021524|gb|EGI01581.1| sensor histidine kinase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 586 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 6/64 (9%) Query: 22 RPSIAIKELIENSLDAE----SSRVETVIA--GGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N+LDA S R+E I + ++D+G G+ E + Sbjct: 477 RLEQVLINLLRNALDAMRNRPSRRLEVRIDATDHNQWRLSVSDSGSGIAPENLANIFDPF 536 Query: 76 CTSK 79 T+K Sbjct: 537 FTTK 540 >gi|220923231|ref|YP_002498533.1| DNA topoisomerase IV subunit B [Methylobacterium nodulans ORS 2060] gi|219947838|gb|ACL58230.1| DNA topoisomerase IV, B subunit [Methylobacterium nodulans ORS 2060] Length = 684 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N++D A +S +E +A GG +TDNG G+ + Sbjct: 79 EVIDNAMDEAVAGHASFIEVELAEGGI--LTVTDNGRGIPVD 118 >gi|104779320|ref|YP_605818.1| DNA gyrase subunit B [Pseudomonas entomophila L48] gi|95108307|emb|CAK13001.1| DNA gyrase, subunit B [Pseudomonas entomophila L48] Length = 806 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 70/247 (28%), Gaps = 25/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDITVIIHTD--ESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+S L L R + + V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKLVLTVRRSG--KIWEQTYVHGVPQAPMAV 158 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 T K+ +++ IR ++ V +S + Sbjct: 159 VGESETT----GTHIHFKPSAETFKNIHFSWDILAKRIRELSFLNSGVGILLKDERSGKE 214 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 + F G + + N+ + G +N F Sbjct: 215 E--FFKYEGGLRAFVEYLNTNKTPVNSQVFHFNVQRDDGVGVEVALQWNDSFNENLLCFT 272 Query: 255 NGRTVQD 261 N +D Sbjct: 273 NNIPQRD 279 >gi|84389419|ref|ZP_00991225.1| hypothetical protein V12B01_19871 [Vibrio splendidus 12B01] gi|84376934|gb|EAP93807.1| hypothetical protein V12B01_19871 [Vibrio splendidus 12B01] Length = 654 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 13/67 (19%) Query: 22 RPSIAIKELIENSLDAESSRVE--------TVIAGGGKSF-FQITDNGFGMTSEEIPMAV 72 R + LI N+LDA +E + + DNG G+ E+IP Sbjct: 546 RLEQVLVNLISNALDA----IEHKEQPQLSIATQELSNTMQILVKDNGLGIPEEDIPYLF 601 Query: 73 QRHCTSK 79 +SK Sbjct: 602 DPFYSSK 608 >gi|288961887|ref|YP_003452197.1| two-component sensor histidine kinase [Azospirillum sp. B510] gi|288914167|dbj|BAI75653.1| two-component sensor histidine kinase [Azospirillum sp. B510] Length = 536 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 3/60 (5%) Query: 21 ERPSIAIKELIENSLD-AESS-RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCT 77 E + LIEN+ A + RV + G+ ++ D+G G++ T Sbjct: 429 ESLESVLANLIENARHHAGADARVTVTLRAEGERAILRVADDGPGISPANADRVFVPFFT 488 >gi|72162533|ref|YP_290190.1| DNA topoisomerase IV subunit B [Thermobifida fusca YX] gi|71916265|gb|AAZ56167.1| DNA topoisomerase (ATP-hydrolyzing) [Thermobifida fusca YX] Length = 702 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A +R+E V+ G ++ DNG G+ + Sbjct: 51 EIIDNSVDEALAGYCTRIEVVLHADG--SVEVRDNGRGIPVD 90 >gi|76801589|ref|YP_326597.1| signal-transducing histidine kinase [Natronomonas pharaonis DSM 2160] gi|76557454|emb|CAI49032.1| signal-transducing histidine kinase; PAS/PAC domain protein [Natronomonas pharaonis DSM 2160] Length = 876 Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 17/68 (25%) Query: 25 IAIKELIENSL---D---AESSRVETVIAGGGKSFFQI-TDNGFGMTSEEIPMAVQR--- 74 ++EL+EN++ D AE++ V + G + D+G G+ + + Sbjct: 761 QVVEELVENAVVHNDAPPAEAT-VRLTLEQDGNELVLVIEDDGPGIP--DTELVFTEEGT 817 Query: 75 ----HCTS 78 H +S Sbjct: 818 EEPLHHSS 825 >gi|317406060|gb|EFV86325.1| sensor protein [Achromobacter xylosoxidans C54] Length = 243 Score = 46.2 bits (108), Expect = 0.018, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 6/54 (11%) Query: 30 LIENSLDA-----ESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCT 77 L++N+ DA + + G ++ ++DNG G+ ++ +P T Sbjct: 143 LVQNAADALAGASGARHIALEGRADGATYVFSVSDNGPGIAADALPRLFTPFYT 196 >gi|94983843|gb|ABF50626.1| DNA topoisomerase IV subunit B [Spiroplasma floricola] gi|94983845|gb|ABF50627.1| DNA topoisomerase IV subunit B [Spiroplasma floricola] Length = 555 Score = 46.2 bits (108), Expect = 0.018, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I G + DNG G+ Sbjct: 14 EIVDNSIDEALAGVCTEINVSIEKDG--SVTVKDNGRGVP 51 >gi|332703597|ref|ZP_08423685.1| integral membrane sensor signal transduction histidine kinase [Desulfovibrio africanus str. Walvis Bay] gi|332553746|gb|EGJ50790.1| integral membrane sensor signal transduction histidine kinase [Desulfovibrio africanus str. Walvis Bay] Length = 576 Score = 46.2 bits (108), Expect = 0.018, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 31 IENSLDAESS--RVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTSK 79 + N+L A S R++ G++ I DNG GM E + + T+K Sbjct: 476 LNNALAAVSDKGRIQISSKDSGQNVLVSIEDNGCGMPKETLEHIFEPFFTTK 527 >gi|281422343|ref|ZP_06253342.1| putative DNA topoisomerase IV, B subunit [Prevotella copri DSM 18205] gi|281403574|gb|EFB34254.1| putative DNA topoisomerase IV, B subunit [Prevotella copri DSM 18205] Length = 669 Score = 46.2 bits (108), Expect = 0.018, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 78/285 (27%), Gaps = 39/285 (13%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT-SKI 80 +KE+++NS+D A + R+E I + D G G+ ++ AV T K Sbjct: 69 LKEVVDNSIDEFKMGAGA-RLEIDIEDN--LRVSVRDYGRGIPQGKLVEAVSVLNTGGKY 125 Query: 81 SDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 + G G AL S H + S + K ++ Sbjct: 126 DSKAFK-KSVGLNGVGVKAVNALSS-----HFEVKSYRDGKVRHLKFEKGILKSDTMEDT 179 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 GT + K+ + + ++R T Sbjct: 180 EDENGTFIFFE-------PDNTLFKNYSFHDDFVETMLRNYTYLN--TGLTIMHNGRRIL 230 Query: 195 ------KMNFQSTNGNFPERISQVIGED--FINNAVELNEKSNEITLQGYTGIPTFNRGN 246 + + I + GED + + G + Sbjct: 231 SRHGLQDLLSDNMTNEGLYDIVHMKGEDIEIAFTHTNQYGEEYYSFVNGQHTTQGGTHQS 290 Query: 247 ANQFYVFINGRTVQDKFILSTIRTAYAETIPLG-RYPVVVLLLEI 290 A + ++ + K+ + IR I + PV +I Sbjct: 291 AFKEHIAKTIKEFYGKYEYADIRNGLVAAIAINVEEPVFESQTKI 335 >gi|148767476|gb|ABR10712.1| DctB [Mesorhizobium sp. CJ3] Length = 606 Score = 46.2 bits (108), Expect = 0.018, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDA----ESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L++N+LDA + R+E + + + DNG G+ E Sbjct: 502 RLEQILVNLLQNALDAMKDQSAPRIEIELAERDDRVLISVRDNGPGLGQEAAGNLFMPFQ 561 Query: 77 TSK 79 T+K Sbjct: 562 TTK 564 >gi|91773184|ref|YP_565876.1| DNA topoisomerase VI subunit B [Methanococcoides burtonii DSM 6242] gi|121689247|sp|Q12WQ0|TOP6B_METBU RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|91712199|gb|ABE52126.1| DNA topoisomerase, type VI subunit B [Methanococcoides burtonii DSM 6242] Length = 622 Score = 46.2 bits (108), Expect = 0.018, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 7/55 (12%) Query: 27 IKELIENSLDA--ESS---RVETVIAGGGKS--FFQITDNGFGMTSEEIPMAVQR 74 +KE ++NSLDA E+ + I GK + DNG G+ E+IP + Sbjct: 42 VKEAVDNSLDACEEAEILPDILLHIERVGKDNVSVIVEDNGPGIVKEQIPKVFAK 96 >gi|253581073|ref|ZP_04858333.1| sensor histidine kinase [Ruminococcus sp. 5_1_39B_FAA] gi|251847609|gb|EES75579.1| sensor histidine kinase [Ruminococcus sp. 5_1_39BFAA] Length = 383 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 14/98 (14%) Query: 8 EKIINQIAAGEIIERPSIAIKELIENSL---DAESSRVETVIAGGGKSFFQIT--DNGFG 62 E + IA GE I R I +I N++ D ++ I G F Q+ DNG G Sbjct: 258 EDNVQVIADGEQIRR---VIHNIISNAIKYMDKPKGIIQIRIKDVG-DFIQVEIEDNGKG 313 Query: 63 MTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPSI 100 + ++++P R D S + G G L SI Sbjct: 314 IAAKDLPSIFDRFY----RTDVSRNSSKGGSGIGL-SI 346 >gi|148654052|ref|YP_001281145.1| DNA topoisomerase IV subunit B [Psychrobacter sp. PRwf-1] gi|148573136|gb|ABQ95195.1| DNA topoisomerase IV subunit B [Psychrobacter sp. PRwf-1] Length = 629 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A + ++ + G + D+G GM ++ Sbjct: 29 TRPNHLAQEVIDNSVDEALAGHAKTIKVQLHNDG--SLSVEDDGRGMPTD 76 >gi|329296288|ref|ZP_08253624.1| sensory histidine kinase DcuS [Plautia stali symbiont] Length = 112 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 32/68 (47%), Gaps = 9/68 (13%) Query: 17 GEIIERPSIAIKELIENSLDAESSR----VETVIA-GGGKSFFQITDNGFGMTSEEIPMA 71 G +I + L+EN+LDA S + + ++ G +++D+G G+ + + Sbjct: 1 GAVIT----VVGNLVENALDAMSEQTEGEIHVMLHYQNGWLTCEVSDDGPGIEPQHLATV 56 Query: 72 VQRHCTSK 79 + ++K Sbjct: 57 FDKGFSTK 64 >gi|317504159|ref|ZP_07962158.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella salivae DSM 15606] gi|315664735|gb|EFV04403.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella salivae DSM 15606] Length = 656 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 E ++NS+D A + VE + G + DNG G+ +E Sbjct: 47 ETVDNSIDEAMAGYCTDVEITLNEDG--SVTVEDNGRGIPVDEHKKL 91 >gi|295111747|emb|CBL28497.1| DNA gyrase subunit B [Synergistetes bacterium SGP1] Length = 644 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +R++ I + D+G G+ ++ Sbjct: 49 VNEVVDNSIDEAMAGFCTRIDVTIHKD--ESVTVQDDGRGIPTD 90 >gi|281424989|ref|ZP_06255902.1| DNA gyrase, B subunit [Prevotella oris F0302] gi|299142183|ref|ZP_07035316.1| DNA gyrase, B subunit [Prevotella oris C735] gi|281400833|gb|EFB31664.1| DNA gyrase, B subunit [Prevotella oris F0302] gi|298576272|gb|EFI48145.1| DNA gyrase, B subunit [Prevotella oris C735] Length = 656 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 E ++NS+D A + VE + G + DNG G+ +E Sbjct: 47 ETVDNSIDEAMAGYCTDVEITLNEDG--SVTVEDNGRGIPVDEHKKL 91 >gi|224537369|ref|ZP_03677908.1| hypothetical protein BACCELL_02247 [Bacteroides cellulosilyticus DSM 14838] gi|224520994|gb|EEF90099.1| hypothetical protein BACCELL_02247 [Bacteroides cellulosilyticus DSM 14838] Length = 623 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 70/256 (27%), Gaps = 42/256 (16%) Query: 3 IRKLSEKIINQIAAGEIIERPSI----------AIKELIENSLD-----AESSRVETVIA 47 IR L + ++ +G I R +KE+++NS+D A R+E I Sbjct: 20 IRHLDDMEHIRVRSGMYIGRLGDGTQNDDGIYVLLKEVMDNSIDEFKMGAG-RRIEINIE 78 Query: 48 GGGKSFFQITDNGFGMTSEEIPMAVQRHCT-SKISDDFSNIHTFGFRG------EALPSI 100 + D G G+ ++ AV + T K + G G AL S Sbjct: 79 DN--LRVSVRDYGRGIPQGKLIEAVSKLNTGGKYDSKAFK-KSVGLNGVGIKAVNALSS- 134 Query: 101 GAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKS 160 + S A + GT + + Sbjct: 135 ----RFEVRSYREGKVRIAIFEKGNLQSDVTESCNEESGTYIFFE-------PDSTLFLN 183 Query: 161 EQVETNLITDVIRRMAIAYPKVSF----TFSTIKSNRYKMNFQSTNGNFPERISQVIGED 216 + N + ++R +S + + + I + GED Sbjct: 184 YSFQANFVETLLRNYTYLNTGLSIIYNGQRIISRHGLEDLLNDNMTAQGLYNIIHLKGED 243 Query: 217 FINNAVELNEKSNEIT 232 N+ E Sbjct: 244 IEIAFTHTNQYGEEYY 259 >gi|194339071|gb|ACF49451.1| GyrB [Amycolatopsis fastidiosa] Length = 465 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 17/74 (22%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT----SEEIPMAVQ-----R 74 E+++NS+D A ++RVE + A GG ++ D+G G+ EE A++ Sbjct: 20 EVVDNSVDEAMAGHATRVEVTLLADGG---VRVDDDGRGIPVDEHPEEKRSALEVVMTVL 76 Query: 75 HCTSKISDDFSNIH 88 H K D + Sbjct: 77 HAGGKFDSDSYAVS 90 >gi|82798482|gb|ABB91904.1| DNA gyrase subunit B [Acholeplasma cavigenitalium] Length = 588 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I G +++D+G G+ + Sbjct: 23 EIVDNSIDEALAGYAKEILLEILPG--EIIRVSDDGRGIPVD 62 >gi|302381375|ref|YP_003817198.1| integral membrane sensor signal transduction histidine kinase [Brevundimonas subvibrioides ATCC 15264] gi|302192003|gb|ADK99574.1| integral membrane sensor signal transduction histidine kinase [Brevundimonas subvibrioides ATCC 15264] Length = 546 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 13/26 (50%) Query: 53 FFQITDNGFGMTSEEIPMAVQRHCTS 78 ++ D+G G+ E + QR TS Sbjct: 464 SIRVDDDGPGIPPENLETVFQRFYTS 489 >gi|108796987|ref|YP_637184.1| DNA gyrase subunit B [Mycobacterium sp. MCS] gi|119866071|ref|YP_936023.1| DNA gyrase subunit B [Mycobacterium sp. KMS] gi|126432619|ref|YP_001068310.1| DNA gyrase subunit B [Mycobacterium sp. JLS] gi|108767406|gb|ABG06128.1| DNA gyrase subunit B [Mycobacterium sp. MCS] gi|119692160|gb|ABL89233.1| DNA gyrase subunit B [Mycobacterium sp. KMS] gi|126232419|gb|ABN95819.1| DNA gyrase subunit B [Mycobacterium sp. JLS] Length = 675 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 8/41 (19%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 E+++N++D A +++VE I GG Q+TD+G G+ Sbjct: 48 EVVDNAVDEAMAGFATKVEVRILENGG---VQVTDDGRGIP 85 >gi|319406453|emb|CBI80093.1| two-component sensor kinase BatS [Bartonella sp. 1-1C] Length = 555 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 10/63 (15%) Query: 22 RPSIAIKELIENSLDAES------SRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQR 74 R I LIEN A S ++ + + + DNG G+ SE I +R Sbjct: 439 RLGQVISNLIEN---ARSFVPRKNGKICITMKNNASTLILTVEDNGPGIRSENIERIFER 495 Query: 75 HCT 77 T Sbjct: 496 FYT 498 >gi|228471275|ref|ZP_04056081.1| DNA mismatch repair enzyme [Porphyromonas uenonis 60-3] gi|228306917|gb|EEK16015.1| DNA mismatch repair enzyme [Porphyromonas uenonis 60-3] Length = 561 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 29 ELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 E I N+ DA++ RV I KS I D+G GMTS++ + SK Sbjct: 31 EAISNAWDADAKRVSITIDRD-KSLLIIRDDGIGMTSKDFQDKFLKIGYSK 80 >gi|189460100|ref|ZP_03008885.1| hypothetical protein BACCOP_00736 [Bacteroides coprocola DSM 17136] gi|189433183|gb|EDV02168.1| hypothetical protein BACCOP_00736 [Bacteroides coprocola DSM 17136] Length = 990 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 17/103 (16%) Query: 25 IAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT-SKISD- 82 AI ELI+N+ DA + + + + + D+G GMT EE T SK+++ Sbjct: 24 TAINELIKNAHDAYADKFDIDFLRCN-NLLVLRDDGLGMTKEEFETRWLTLGTESKLANK 82 Query: 83 -------DFSNIHT--FGFRGE---ALPSIGAVSHLTLMSRPP 113 D S G +G A+ SIG S + ++S+ Sbjct: 83 KSSLPPIDISKPRRPIMGEKGIGRLAIASIG--SQVLIVSKAK 123 >gi|194333604|ref|YP_002015464.1| multi-sensor signal transduction histidine kinase [Prosthecochloris aestuarii DSM 271] gi|194311422|gb|ACF45817.1| multi-sensor signal transduction histidine kinase [Prosthecochloris aestuarii DSM 271] Length = 599 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 8/57 (14%) Query: 26 AIKELIENSL-----DAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 ++ L++N++ D+ R+ + ++ DNG G+ +++ +R Sbjct: 485 VVRNLLDNAIKYVADDSG--RIRIIAFPANDMVRLEVEDNGAGIPQKDLGRIFERFY 539 >gi|315023564|gb|EFT36568.1| nitrogen regulation protein ntrY [Riemerella anatipestifer RA-YM] gi|325336059|gb|ADZ12333.1| Signal transduction histidine kinase [Riemerella anatipestifer RA-GD] Length = 484 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 30 LIENSLDAESSR----VETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI N++ AES + + F + DNG GM+ E++ + + TSK Sbjct: 388 LITNAIQAESENRKLIINIDLEERYNYIRFIVEDNGEGMSEEKMAKIFEPNFTSK 442 >gi|313206495|ref|YP_004045672.1| integral membrane sensor signal transduction histidine kinase [Riemerella anatipestifer DSM 15868] gi|312445811|gb|ADQ82166.1| integral membrane sensor signal transduction histidine kinase [Riemerella anatipestifer DSM 15868] Length = 484 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 30 LIENSLDAESSR----VETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI N++ AES + + F + DNG GM+ E++ + + TSK Sbjct: 388 LITNAIQAESENRKLIINIDLEERYNYIRFIVEDNGEGMSEEKMAKIFEPNFTSK 442 >gi|310779030|ref|YP_003967363.1| Heat shock protein Hsp90 [Ilyobacter polytropus DSM 2926] gi|309748353|gb|ADO83015.1| Heat shock protein Hsp90 [Ilyobacter polytropus DSM 2926] Length = 629 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 76/252 (30%), Gaps = 62/252 (24%) Query: 27 IKELIENSLDAESSRVE----TVIAGGGK-----------------SFFQITDNGFGMTS 65 ++EL+ N+ DA ++ I G +I+DNG GM Sbjct: 31 LRELVSNASDA----IDKLKFLSITDKGLLEGDQDFKIEIAASKDKKVIKISDNGIGMNH 86 Query: 66 EEI-----------PMAVQRHCT-SKISDDFSNIHTF--GFRGEALPSIGAVS-HLTLMS 110 +E+ A + SK D I F GF S V+ +T+ + Sbjct: 87 DELVANLGTIAKSGSKAFMKAMKESKKQSDLEIIGQFGVGF-----YSAFMVAEKITVAT 141 Query: 111 RPPQNNTGAQIAISGEKISSVRPVAMNP-GTIVEVRDLFFTIPARLNFLKSEQVETNLIT 169 R + G+ + + GT + + I E +E I Sbjct: 142 RRAGEEKAYKWESDGKNTFVIDEIKKEKRGTEITLH-----IREDKENPNDEYLEEYKIR 196 Query: 170 DVIRRMAIAYPKVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSN 229 ++I++ + + + +G+ E+I + + + + Sbjct: 197 ELIKKYSDY-----------VRYPINLEVEKKDGDKTEKIMETLNSMIPIWKKNKTDVTE 245 Query: 230 EITLQGYTGIPT 241 E + Y Sbjct: 246 EEYNEFYISKFH 257 >gi|295399014|ref|ZP_06808996.1| multi-sensor signal transduction histidine kinase [Geobacillus thermoglucosidasius C56-YS93] gi|294978480|gb|EFG54076.1| multi-sensor signal transduction histidine kinase [Geobacillus thermoglucosidasius C56-YS93] Length = 595 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 21 ERPSIAIKELIENSL---DAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 +R + LI+N++ D + V+ + GG + D+G G+ E++P +R Sbjct: 483 DRIEQVLTNLIDNAIRHTDQNGT-VKIIAEQNGGGVTIHVQDSGTGIPEEDLPFVFERFY 541 >gi|312110380|ref|YP_003988696.1| multi-sensor signal transduction histidine kinase [Geobacillus sp. Y4.1MC1] gi|311215481|gb|ADP74085.1| multi-sensor signal transduction histidine kinase [Geobacillus sp. Y4.1MC1] Length = 595 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 21 ERPSIAIKELIENSL---DAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 +R + LI+N++ D + V+ + GG + D+G G+ E++P +R Sbjct: 483 DRIEQVLTNLIDNAIRHTDQNGT-VKIIAEQNGGGVTIHVQDSGTGIPEEDLPFVFERFY 541 >gi|229100336|ref|ZP_04231209.1| hypothetical protein bcere0020_55230 [Bacillus cereus Rock3-29] gi|228683092|gb|EEL37097.1| hypothetical protein bcere0020_55230 [Bacillus cereus Rock3-29] Length = 447 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 5/50 (10%) Query: 30 LIENSL---DAESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRH 75 L+ N+L D + + ++ I G + I DNG G+ ++P R+ Sbjct: 349 LLNNALIHTDVK-TLIQVRIKQTSGYTIVTIEDNGDGINKNDLPHIFDRY 397 >gi|255656614|ref|ZP_05402023.1| two-component sensor histidine kinase [Clostridium difficile QCD-23m63] Length = 758 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Query: 30 LIENSL----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ D +V V+ K ++ DNG G+ E++ +R Sbjct: 326 LVDNAIKYTQDNGIVQV-VVLKDEEKIVIKVIDNGVGIPKEDVERIFERFY 375 >gi|194014511|ref|ZP_03053128.1| sensor histidine kinase [Bacillus pumilus ATCC 7061] gi|194013537|gb|EDW23102.1| sensor histidine kinase [Bacillus pumilus ATCC 7061] Length = 467 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 4/50 (8%) Query: 30 LIENSL---DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 LI N+L DA+ + + + I DNG G+ E+ R+ Sbjct: 371 LILNALVHNDAD-VNIIVQLEQKENTHITIQDNGKGIEEAELEKVFDRYY 419 >gi|182677812|ref|YP_001831958.1| DNA gyrase, B subunit [Beijerinckia indica subsp. indica ATCC 9039] gi|182633695|gb|ACB94469.1| DNA gyrase, B subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 817 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N++D A ++RV + G +TD+G G+ ++ Sbjct: 53 EVVDNAIDEALAGHATRVTVTLNADG--SVTVTDDGRGIPTD 92 >gi|167625558|ref|YP_001675852.1| DNA topoisomerase IV subunit B [Shewanella halifaxensis HAW-EB4] gi|167355580|gb|ABZ78193.1| DNA topoisomerase IV, B subunit [Shewanella halifaxensis HAW-EB4] Length = 631 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 31/197 (15%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A +SR++ ++ + ++TD+G GM EE + Sbjct: 34 RPNHLGQEVIDNSVDEALAGHASRIDVILHAD--NSLEVTDDGRGMPVDIHPEEGIPGVE 91 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIA 122 + + + H K S+ + G G AL S + + R Sbjct: 92 LILTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSS-----RVEITVRRNAEVYEMAFE 145 Query: 123 ISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 + + ++ S + +T +++ A+ P + Sbjct: 146 HGEKVEDLHVTGTCGRRNTGTSVHFW----PDPSYFDSGNFSISKLTYLLKAKAVLCPGL 201 Query: 183 SFTFSTIKSNRYKMNFQ 199 F ++N + F Sbjct: 202 RIKFVNKQTNETQEWFY 218 >gi|84683525|ref|ZP_01011428.1| DNA topoisomerase IV, B subunit [Maritimibacter alkaliphilus HTCC2654] gi|84668268|gb|EAQ14735.1| DNA topoisomerase IV, B subunit [Rhodobacterales bacterium HTCC2654] Length = 650 Score = 45.8 bits (107), Expect = 0.018, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A ++R+E + G +TDNG G+ + Sbjct: 46 VAEILDNSMDEAVAGHATRIEVELH--GDYSVTVTDNGRGIPID 87 >gi|330830289|ref|YP_004393241.1| two-component system flagellar sensor histidine kinase FlrB [Aeromonas veronii B565] gi|328805425|gb|AEB50624.1| Two-component system flagellar sensor histidine kinase FlrB [Aeromonas veronii B565] Length = 344 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 23 PSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 + AI LI N+ A ++ + + G + ++ DNG G+ S ++ + T Sbjct: 236 LAGAINNLIANAQQAGATSLLVSAVRSGARVEVRVIDNGKGIPSHQLGQVFEPFFT 291 >gi|328544898|ref|YP_004305007.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [polymorphum gilvum SL003B-26A1] gi|326414640|gb|ADZ71703.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Polymorphum gilvum SL003B-26A1] Length = 481 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 13/114 (11%) Query: 30 LIENSLDAESS--RVETVI--AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFS 85 LIEN+L S+ RVE + G G S F + D G G+ E +P +R D + Sbjct: 357 LIENALKYGSTGRRVEVALRPEGDGASVFSVRDFGEGIAPEHLPRLTERFY----RVDVA 412 Query: 86 NIHTFGFRGEALPSIGAV-----SHLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 + T G L + + + L + SRP + S K+S + Sbjct: 413 SSRTMKGTGLGLAIVKHILTRHRARLEIDSRPGAGACFSVRFQSPGKLSRNGNM 466 >gi|301335659|ref|ZP_07223903.1| DNA gyrase subunit B [Chlamydia trachomatis L2tet1] Length = 804 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 + + E+++NS+D A + V I GG I+DNG G+ Sbjct: 35 VTGLHHLVYEVVDNSIDEAMAGFCTEVVVRILEDGG---ISISDNGRGIP 81 >gi|296878312|ref|ZP_06902320.1| phosphate regulon sensor histidine kinase protein PhoR [Clostridium difficile NAP07] gi|296430610|gb|EFH16449.1| phosphate regulon sensor histidine kinase protein PhoR [Clostridium difficile NAP07] Length = 429 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Query: 30 LIENSL----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ D +V V+ K ++ DNG G+ E++ +R Sbjct: 326 LVDNAIKYTQDNGIVQV-VVLKDEEKIVIKVIDNGVGIPKEDVERIFERFY 375 >gi|270265138|ref|ZP_06193401.1| hypothetical protein SOD_k01770 [Serratia odorifera 4Rx13] gi|270041072|gb|EFA14173.1| hypothetical protein SOD_k01770 [Serratia odorifera 4Rx13] Length = 590 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Query: 29 ELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIP 69 ELI N+ DA++ V + G F + D+G GM S +I Sbjct: 30 ELISNAYDADAESVTLEFLEIGSNKFITVKDDGTGMNSTDIQ 71 >gi|258625637|ref|ZP_05720518.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258582092|gb|EEW06960.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 220 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 2/117 (1%) Query: 385 DDPTYSEDNDPVEESEATHYQLGIACAQIHQNYIISQTTDGLVIVDQHAAHERLIFEKMR 444 + S + ++E +LG A + Y++ ++ G V++ H A + + Sbjct: 18 NSSPVSTSSLQTTKTEIVIEKLGKAIQVVEGEYLLMSSSQGCVLISLHQAQLVKL--RGL 75 Query: 445 QDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAERFGPNAIAIREIP 501 + + +Q LL P + L E E + H E LH+LGI+ + ++I + +P Sbjct: 76 LNAQHGALKAQPLLVPLSLKLSESEWQVAQTHLESLHQLGIELKTRANHSIMVMAVP 132 >gi|255506765|ref|ZP_05382404.1| DNA gyrase subunit B [Chlamydia trachomatis D(s)2923] Length = 804 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 + + E+++NS+D A + V I GG I+DNG G+ Sbjct: 35 VTGLHHLVYEVVDNSIDEAMAGFCTEVVVRILEDGG---ISISDNGRGIP 81 >gi|255348547|ref|ZP_05380554.1| DNA gyrase subunit B [Chlamydia trachomatis 70] gi|255503087|ref|ZP_05381477.1| DNA gyrase subunit B [Chlamydia trachomatis 70s] gi|289525228|emb|CBJ14704.1| DNA gyrase subunit B [Chlamydia trachomatis Sweden2] gi|296434776|gb|ADH16954.1| DNA gyrase subunit B [Chlamydia trachomatis E/150] gi|296438496|gb|ADH20649.1| DNA gyrase subunit B [Chlamydia trachomatis E/11023] Length = 804 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 + + E+++NS+D A + V I GG I+DNG G+ Sbjct: 35 VTGLHHLVYEVVDNSIDEAMAGFCTEVVVRILEDGG---ISISDNGRGIP 81 >gi|237802614|ref|YP_002887808.1| DNA gyrase subunit B [Chlamydia trachomatis B/Jali20/OT] gi|231273848|emb|CAX10638.1| DNA gyrase subunit B [Chlamydia trachomatis B/Jali20/OT] Length = 804 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 + + E+++NS+D A + V I GG I+DNG G+ Sbjct: 35 VTGLHHLVYEVVDNSIDEAMAGFCTEVVVRILEDGG---ISISDNGRGIP 81 >gi|166154400|ref|YP_001654518.1| DNA gyrase subunit B [Chlamydia trachomatis 434/Bu] gi|166155275|ref|YP_001653530.1| DNA gyrase subunit B [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|165930388|emb|CAP03881.1| DNA gyrase subunit B [Chlamydia trachomatis 434/Bu] gi|165931263|emb|CAP06835.1| DNA gyrase subunit B [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 804 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 + + E+++NS+D A + V I GG I+DNG G+ Sbjct: 35 VTGLHHLVYEVVDNSIDEAMAGFCTEVVVRILEDGG---ISISDNGRGIP 81 >gi|170719191|ref|YP_001746879.1| DNA gyrase subunit B [Pseudomonas putida W619] gi|169757194|gb|ACA70510.1| DNA gyrase, B subunit [Pseudomonas putida W619] Length = 806 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 70/247 (28%), Gaps = 25/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 44 EVVDNSIDEALAGHCDDITVIIHTD--ESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+S L L R + + V Sbjct: 102 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKLVLTVRRSG--KIWEQTYVHGVPQAPMAV 158 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 T K+ +++ IR ++ V +S + Sbjct: 159 VGESETT----GTHIHFKPSAETFKNIHFSWDILAKRIRELSFLNSGVGILLKDERSGKE 214 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 + F G + + N+ + G +N F Sbjct: 215 E--FFKYEGGLRAFVEYLNTNKTPVNSQVFHFNVQREDGVGVEVALQWNDSFNENLLCFT 272 Query: 255 NGRTVQD 261 N +D Sbjct: 273 NNIPQRD 279 >gi|3510605|gb|AAC33551.1| gyrase subunit B [Chlamydia trachomatis] Length = 796 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 + + E+++NS+D A + V I GG I+DNG G+ Sbjct: 27 VTGLHHLVYEVVDNSIDEAMAGFCTEVVVRILEDGG---ISISDNGRGIP 73 >gi|76788912|ref|YP_327998.1| DNA gyrase subunit B [Chlamydia trachomatis A/HAR-13] gi|237804536|ref|YP_002888690.1| DNA gyrase subunit B [Chlamydia trachomatis B/TZ1A828/OT] gi|76167442|gb|AAX50450.1| DNA gyrase subunit B [Chlamydia trachomatis A/HAR-13] gi|231272836|emb|CAX09745.1| DNA gyrase subunit B [Chlamydia trachomatis B/TZ1A828/OT] Length = 804 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 + + E+++NS+D A + V I GG I+DNG G+ Sbjct: 35 VTGLHHLVYEVVDNSIDEAMAGFCTEVVVRILEDGG---ISISDNGRGIP 81 >gi|15604910|ref|NP_219694.1| DNA gyrase subunit B [Chlamydia trachomatis D/UW-3/CX] gi|255310990|ref|ZP_05353560.1| DNA gyrase subunit B [Chlamydia trachomatis 6276] gi|255317291|ref|ZP_05358537.1| DNA gyrase subunit B [Chlamydia trachomatis 6276s] gi|6647525|sp|O84193|GYRB_CHLTR RecName: Full=DNA gyrase subunit B gi|3328595|gb|AAC67782.1| DNA Gyrase Subunit B [Chlamydia trachomatis D/UW-3/CX] gi|296435705|gb|ADH17879.1| DNA gyrase subunit B [Chlamydia trachomatis G/9768] gi|296436629|gb|ADH18799.1| DNA gyrase subunit B [Chlamydia trachomatis G/11222] gi|296437565|gb|ADH19726.1| DNA gyrase subunit B [Chlamydia trachomatis G/11074] gi|297140064|gb|ADH96822.1| DNA gyrase subunit B [Chlamydia trachomatis G/9301] gi|297748320|gb|ADI50866.1| DNA gyrase subunit B [Chlamydia trachomatis D-EC] gi|297749200|gb|ADI51878.1| DNA gyrase subunit B [Chlamydia trachomatis D-LC] Length = 804 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 20 IERPSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 + + E+++NS+D A + V I GG I+DNG G+ Sbjct: 35 VTGLHHLVYEVVDNSIDEAMAGFCTEVVVRILEDGG---ISISDNGRGIP 81 >gi|328543970|ref|YP_004304079.1| Topoisomerase IV, subunit B:DNA gyrase, subunit B:DNA topoisomerase II:DNA gyrase, subunit B, C-terminal:ATP-binding region [polymorphum gilvum SL003B-26A1] gi|326413714|gb|ADZ70777.1| Topoisomerase IV, subunit B:DNA gyrase, subunit B:DNA topoisomerase II:DNA gyrase, subunit B, C-terminal:ATP-binding region [Polymorphum gilvum SL003B-26A1] Length = 703 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ ++ + G + +TDNG G+ + Sbjct: 100 EVVDNSMDEAVAGHATWIDVALDADG--YLTVTDNGRGIPVD 139 >gi|294054231|ref|YP_003547889.1| DNA gyrase, B subunit [Coraliomargarita akajimensis DSM 45221] gi|293613564|gb|ADE53719.1| DNA gyrase, B subunit [Coraliomargarita akajimensis DSM 45221] Length = 846 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 7/51 (13%) Query: 21 ER-PSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 ER + E+++NS+D A S++ I G I D+G G+ + Sbjct: 51 ERGLHHCVFEIVDNSIDEALAGHCSQITVSIHNDG--SCSIEDDGRGIPVD 99 >gi|291446126|ref|ZP_06585516.1| gyrase B [Streptomyces roseosporus NRRL 15998] gi|291349073|gb|EFE75977.1| gyrase B [Streptomyces roseosporus NRRL 15998] Length = 682 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I GG ++ DNG G+ Sbjct: 60 VQEVVDNSVDEAMAGHADTIDVTILPDGG---VRVIDNGRGIP 99 >gi|269115151|ref|YP_003302914.1| DNA gyrase subunit B [Mycoplasma hominis] gi|290457646|sp|P43053|GYRB_MYCHP RecName: Full=DNA gyrase subunit B gi|268322776|emb|CAX37511.1| DNA gyrase subunit B [Mycoplasma hominis ATCC 23114] Length = 648 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ ++ + + ++ DNG GM Sbjct: 46 EIVDNSVDEAMAGFATEIKIKLYPN--NVIEVEDNGRGMP 83 >gi|302520521|ref|ZP_07272863.1| DNA gyrase, B subunit [Streptomyces sp. SPB78] gi|318057387|ref|ZP_07976110.1| DNA gyrase subunit B [Streptomyces sp. SA3_actG] gi|318079451|ref|ZP_07986783.1| DNA gyrase subunit B [Streptomyces sp. SA3_actF] gi|302429416|gb|EFL01232.1| DNA gyrase, B subunit [Streptomyces sp. SPB78] Length = 718 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I GG ++ DNG G+ Sbjct: 96 VQEVVDNSVDEALAGHADTIDVTILPDGG---VRVIDNGRGIP 135 >gi|239942665|ref|ZP_04694602.1| DNA gyrase subunit B [Streptomyces roseosporus NRRL 15998] gi|239989124|ref|ZP_04709788.1| DNA gyrase subunit B [Streptomyces roseosporus NRRL 11379] Length = 690 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I GG ++ DNG G+ Sbjct: 68 VQEVVDNSVDEAMAGHADTIDVTILPDGG---VRVIDNGRGIP 107 >gi|239825589|ref|YP_002948213.1| DNA gyrase subunit B [Geobacillus sp. WCH70] gi|239805882|gb|ACS22947.1| DNA gyrase, B subunit [Geobacillus sp. WCH70] Length = 640 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I ITDNG G+ + Sbjct: 47 EIVDNSIDEALAGYCTEINVTIEKDNI--IAITDNGRGIPVD 86 >gi|56459116|ref|YP_154397.1| DNA gyrase subunit B [Idiomarina loihiensis L2TR] gi|56178126|gb|AAV80848.1| DNA gyrase subunit B [Idiomarina loihiensis L2TR] Length = 805 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 72/247 (29%), Gaps = 25/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A S + I G + D+G G+ EE A Q H Sbjct: 43 EVVDNSIDEALAGHCSEIMVTIHSDG--SVSVKDDGRGIPVDIHEEEGVSAAQVIMTVLH 100 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+S L L R + + S Sbjct: 101 AGGKFDDNSYKV-SGGLHGVGISVVNALSEKLQLTIRRQGQV--YEQTYHMGEPDSDVKP 157 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 + T + + +++ +R ++ V + +R Sbjct: 158 VGDTDTTGTELRFW----PSHETFTDTEFHYDILAKRLRELSFLNSGVGIRLRDERDDRE 213 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 + G ++ + + + G +N Y F Sbjct: 214 DLFKY--EGGIAAFVNYLNKNKTPIHEKAFYFTTQREDGIGVEVSMQWNDSFQENIYCFT 271 Query: 255 NGRTVQD 261 N +D Sbjct: 272 NNIPQRD 278 >gi|20094357|ref|NP_614204.1| DNA topoisomerase VI subunit B [Methanopyrus kandleri AV19] gi|19887419|gb|AAM02134.1| DNA topoisomerase VI, subunit B [Methanopyrus kandleri AV19] Length = 475 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 56/181 (30%), Gaps = 31/181 (17%) Query: 27 IKELIENSLDA-ESSRV--ETVI----AGGGKSFFQITDNGFGMTSEEIPMAVQRH-CTS 78 + EL+ NS+DA +R+ + + ++ DNG G+ E +P + Sbjct: 35 VHELVTNSMDACHLNRIRPDVRVVIRREEENVYRVRVIDNGPGIPPERVPKVFGKFLAGD 94 Query: 79 KISDDFSNIHTFGFR-----GEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVR 132 K D I + G + G AL ++ + +++ + Sbjct: 95 KF-DPVYGIQSMGQQGIGAAGVALYALITTGEPVRVLTSTDGRTAHYFEVKPDPSTNEPV 153 Query: 133 PVAMNP------GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF 186 V GT VEV + + + +RR+ P + Sbjct: 154 VVRREKRPASRRGTTVEVTIGDAVYESGRRGPR----------EYLRRLHAVNPHARISL 203 Query: 187 S 187 Sbjct: 204 R 204 >gi|453419|emb|CAA54665.1| gyrB [Mycoplasma hominis ATCC 23114] Length = 648 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ ++ + + ++ DNG GM Sbjct: 46 EIVDNSVDEAMAGFATEIKIKLYPN--NVIEVEDNGRGMP 83 >gi|86139905|ref|ZP_01058470.1| C4-dicarboxylate transport sensor protein DctB, putative [Roseobacter sp. MED193] gi|85823323|gb|EAQ43533.1| C4-dicarboxylate transport sensor protein DctB, putative [Roseobacter sp. MED193] Length = 590 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 10/68 (14%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N+LDA ++ VE ++A G + + DNG G+ E+ Sbjct: 480 RLEQVMVNLLRNALDA--TKSVEEPEVEILLAAGETATLTVRDNGVGI--EDFGSLFDPF 535 Query: 76 CTSKISDD 83 T+K + D Sbjct: 536 YTTKQAGD 543 >gi|260642826|ref|ZP_05859558.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565] gi|260620370|gb|EEX43241.1| conserved hypothetical protein [Bacteroides finegoldii DSM 17565] Length = 751 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 17/103 (16%) Query: 25 IAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT-SKISD- 82 AI ELI+N+ DA + + + + + D+G GMT EE T SK+++ Sbjct: 24 TAINELIKNAHDAYADKFDIDFLRCN-NLLVLRDDGLGMTKEEFETRWLTLGTESKLANK 82 Query: 83 -------DFSNIHT--FGFRGE---ALPSIGAVSHLTLMSRPP 113 D S G +G A+ SIG S + ++S+ Sbjct: 83 KSSLPPIDISKPRRPIMGEKGIGRLAIASIG--SQVLIVSKAK 123 >gi|194339115|gb|ACF49473.1| GyrB [Amycolatopsis thermoflava] Length = 450 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 8/46 (17%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 E+++NS+D A +++VE + A GG ++ D+G G+ EE P Sbjct: 7 EVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVEEHP 49 >gi|194339087|gb|ACF49459.1| GyrB [Amycolatopsis methanolica] Length = 463 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 8/46 (17%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 E+++NS+D A +++VE + A GG ++ D+G G+ EE P Sbjct: 6 EVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVEEHP 48 >gi|194339069|gb|ACF49450.1| GyrB [Amycolatopsis eurytherma] Length = 457 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 8/46 (17%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 E+++NS+D A +++VE + A GG ++ D+G G+ EE P Sbjct: 6 EVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVEEHP 48 >gi|310767444|gb|ADP12394.1| putative 2-component sensor protein [Erwinia sp. Ejp617] Length = 579 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 30 LIENSLDA----ESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LIEN+LDA + ++ G +++D+G G+ + + + +SK Sbjct: 478 LIENALDAAGESGDGEISVLLHYQNGWLNCEVSDDGPGIAAPRLKNIFAKGYSSK 532 >gi|283478631|emb|CAY74547.1| putative 2-component sensor protein [Erwinia pyrifoliae DSM 12163] Length = 579 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 30 LIENSLDA----ESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LIEN+LDA + ++ G +++D+G G+ + + + +SK Sbjct: 478 LIENALDAAGESGDGEISVLLHYQNGWLNCEVSDDGPGIAAPRLKNIFAKGYSSK 532 >gi|259908662|ref|YP_002649018.1| sensory histidine kinase DcuS [Erwinia pyrifoliae Ep1/96] gi|224964284|emb|CAX55791.1| Sensor protein [Erwinia pyrifoliae Ep1/96] Length = 546 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 30 LIENSLDA----ESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LIEN+LDA + ++ G +++D+G G+ + + + +SK Sbjct: 445 LIENALDAAGESGDGEISVLLHYQNGWLNCEVSDDGPGIAAPRLKNIFAKGYSSK 499 >gi|119944485|ref|YP_942165.1| C4-dicarboxylate transport sensor protein ATPase subunit [Psychromonas ingrahamii 37] gi|119863089|gb|ABM02566.1| sensor protein for C4-dicarboxylate transport, sensor protein, ATPase domain [Psychromonas ingrahamii 37] Length = 594 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 39/79 (49%), Gaps = 8/79 (10%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDA----ESSRVETVIA-GGGKSFFQITDNG 60 L +K + Q+ A E I+ + L+ N++ A + ++E +++ G ++ ++ D G Sbjct: 476 LPDKPV-QVKA-EPIQ-LEQIVVNLLSNAIQAMEECKEKQIEIILSVNGQQAQIEVIDTG 532 Query: 61 FGMTSEEIPMAVQRHCTSK 79 G+ ++ + T+K Sbjct: 533 IGINESDLAKLFEPFFTTK 551 >gi|333025714|ref|ZP_08453778.1| putative DNA gyrase subunit B [Streptomyces sp. Tu6071] gi|332745566|gb|EGJ76007.1| putative DNA gyrase subunit B [Streptomyces sp. Tu6071] Length = 765 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I + GG ++ DNG G+ Sbjct: 143 VQEVVDNSVDEALAGHADTIDVTILSDGG---VRVVDNGRGIP 182 >gi|296449930|ref|ZP_06891694.1| phosphate regulon sensor histidine kinase protein PhoR [Clostridium difficile NAP08] gi|296261200|gb|EFH08031.1| phosphate regulon sensor histidine kinase protein PhoR [Clostridium difficile NAP08] Length = 441 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Query: 30 LIENSL----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ D +V V+ K ++ DNG G+ E++ +R Sbjct: 326 LVDNAIKYTQDNGIVQV-VVLKDEEKIVIKVIDNGVGIPKEDVERIFERFY 375 >gi|294675548|ref|YP_003576164.1| sensor histidine kinase [Prevotella ruminicola 23] gi|294473924|gb|ADE83313.1| sensor histidine kinase [Prevotella ruminicola 23] Length = 371 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 26 AIKELIENSLDA--ESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 I+ L +N++DA + ++ I + +ITD G G+ ++I T+K Sbjct: 273 VIENLCKNAVDAMEGAGKISIQLIDDDHRVAIEITDTGKGIRKKDINHVFTPGFTTK 329 >gi|260591755|ref|ZP_05857213.1| DNA gyrase, B subunit [Prevotella veroralis F0319] gi|260536039|gb|EEX18656.1| DNA gyrase, B subunit [Prevotella veroralis F0319] Length = 657 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMA 71 E ++NS+D A +E I + + D+G G+ +E Sbjct: 47 ETVDNSIDEAMAGYCQNIEVTINED--NSITVEDDGRGIPVDEHKKL 91 >gi|163750553|ref|ZP_02157791.1| flagellar regulatory protein B [Shewanella benthica KT99] gi|161329708|gb|EDQ00697.1| flagellar regulatory protein B [Shewanella benthica KT99] Length = 373 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 9/62 (14%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKS-----FFQITDNGFGMTSEEIPMAVQRHCT 77 S AI L+ NS++A ++ +E G +TDNG G+ E ++ T Sbjct: 249 LSSAINNLVINSIEAGATLIELR----GSETESQIQIHVTDNGRGLDKEMQQKVLEPFFT 304 Query: 78 SK 79 +K Sbjct: 305 TK 306 >gi|126661626|ref|ZP_01732651.1| heat shock protein 90 [Cyanothece sp. CCY0110] gi|126617088|gb|EAZ87932.1| heat shock protein 90 [Cyanothece sp. CCY0110] Length = 418 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 78/286 (27%), Gaps = 47/286 (16%) Query: 27 IKELIENSLDAESS-----------------RVETVIAGGGKSFFQITDNGFGMTSEEIP 69 ++ELI N++DA S + + K+ I DNG GMT +EI Sbjct: 32 LRELISNAVDAISKLKMASLAGELSGDVPEPEITITVDKSNKTL-SIYDNGIGMTVDEIK 90 Query: 70 MAVQRHCTS----------KISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTG 118 + + S K ++D GF S V+ + + + G Sbjct: 91 KYINQVAFSSAEEFVKKYQKSANDLIGHFGLGF-----YSAFMVAKQVEIDT--LSYKEG 143 Query: 119 AQIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 +Q S + + T V + +L+S I +++ + Sbjct: 144 SQAVHWSCDGSPEFEITESSKTQVGTTITLTLMDDEQEYLES-----QRIRQLVKTYSDF 198 Query: 179 YP-KVSFTFSTIKSNRYKMNFQS---TNGNFPERISQVIGEDFINNAVELNEKSNEITLQ 234 P + F TI + T+ ++ E + L Sbjct: 199 VPVPIKFENETINRQKALWKESPQNLTDEDYLEFYRYLYPFQEDPLLWVHLNTDYPYLLN 258 Query: 235 GYTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGR 280 G P F+ E + R Sbjct: 259 GILYFPKLRPDVDVSQGHI--KLFCNQVFVNDHCEEIIPEFLMPLR 302 >gi|187477033|ref|YP_785057.1| two-component system sensor kinase [Bordetella avium 197N] gi|115421619|emb|CAJ48129.1| two-component system sensor kinase [Bordetella avium 197N] Length = 436 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%) Query: 25 IAIKELIENSLD--AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISD 82 ++ L+ N+++ A + E + G+ + DNG G+ EE+P QR+ +S++ D Sbjct: 330 TVLRNLVRNAIEHAAPA---ELRASLDGQGSLVLADNGRGIAPEELPFVFQRYFSSRLKD 386 >gi|126700251|ref|YP_001089148.1| two-component sensor histidine kinase [Clostridium difficile 630] gi|254976230|ref|ZP_05272702.1| two-component sensor histidine kinase [Clostridium difficile QCD-66c26] gi|255093617|ref|ZP_05323095.1| two-component sensor histidine kinase [Clostridium difficile CIP 107932] gi|255101805|ref|ZP_05330782.1| two-component sensor histidine kinase [Clostridium difficile QCD-63q42] gi|255315365|ref|ZP_05356948.1| two-component sensor histidine kinase [Clostridium difficile QCD-76w55] gi|255518030|ref|ZP_05385706.1| two-component sensor histidine kinase [Clostridium difficile QCD-97b34] gi|255651146|ref|ZP_05398048.1| two-component sensor histidine kinase [Clostridium difficile QCD-37x79] gi|260684212|ref|YP_003215497.1| two-component sensor histidine kinase [Clostridium difficile CD196] gi|260687871|ref|YP_003219005.1| two-component sensor histidine kinase [Clostridium difficile R20291] gi|115251688|emb|CAJ69523.1| Two-component sensor histidine kinase [Clostridium difficile] gi|260210375|emb|CBA64751.1| two-component sensor histidine kinase [Clostridium difficile CD196] gi|260213888|emb|CBE05916.1| two-component sensor histidine kinase [Clostridium difficile R20291] Length = 429 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Query: 30 LIENSL----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ D +V V+ K ++ DNG G+ E++ +R Sbjct: 326 LVDNAIKYTQDNGIVQV-VVLKDEEKIVIKVIDNGVGIPKEDVERIFERFY 375 >gi|298206924|ref|YP_003715103.1| sensor histidine kinase [Croceibacter atlanticus HTCC2559] gi|83849558|gb|EAP87426.1| sensor histidine kinase [Croceibacter atlanticus HTCC2559] Length = 387 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Query: 30 LIENSLDA--ESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N++DA ++ I +I+D G G+ + + TSK Sbjct: 292 LVKNAIDAMKGKGQLSLRLIEDQKVVKIEISDTGKGIPKSKFKKVFETGYTSK 344 >gi|294631859|ref|ZP_06710419.1| LOW QUALITY PROTEIN: two-component system sensor kinase [Streptomyces sp. e14] gi|292835192|gb|EFF93541.1| LOW QUALITY PROTEIN: two-component system sensor kinase [Streptomyces sp. e14] Length = 410 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Query: 23 PSIAIKELIENSLDA-ESS---RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCT 77 + L++N+LDA ++ RVE + G++ ++ D G G+ ++ + + Sbjct: 225 LVTVVGNLVDNALDAVAATPHARVEVELRAEGRTVVLRVRDTGPGIPADRRDLIFTEGWS 284 Query: 78 SK 79 +K Sbjct: 285 TK 286 >gi|315497055|ref|YP_004085859.1| DNA gyrase, b subunit [Asticcacaulis excentricus CB 48] gi|315415067|gb|ADU11708.1| DNA gyrase, B subunit [Asticcacaulis excentricus CB 48] Length = 815 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A ++RVE ++ G ++D+G GM + Sbjct: 50 VYEVVDNAIDEALAGHATRVEVILNADG--SCSVSDDGRGMPVD 91 >gi|116619533|ref|YP_821689.1| integral membrane sensor signal transduction histidine kinase [Candidatus Solibacter usitatus Ellin6076] gi|116222695|gb|ABJ81404.1| integral membrane sensor signal transduction histidine kinase [Candidatus Solibacter usitatus Ellin6076] Length = 532 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 9/62 (14%) Query: 25 IAIKELIENSLDAESSR------VETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 + L+ N+ AE+++ V + G + ++DNG G+ E + T Sbjct: 413 QVVLNLVLNA--AEATQARPDRHVTVSTSSSEGMAQIFVSDNGEGIPPENLSKIFDPFFT 470 Query: 78 SK 79 +K Sbjct: 471 TK 472 >gi|134287894|ref|YP_001110059.1| hypothetical protein Bcep1808_7657 [Burkholderia vietnamiensis G4] gi|134132544|gb|ABO60527.1| conserved hypothetical protein [Burkholderia vietnamiensis G4] Length = 810 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 11/76 (14%) Query: 6 LSEKIINQI---AAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFG 62 L +II+ I AG AI EL+ NS+DA ++ V+ + G F+ +D+G G Sbjct: 7 LDPQIIHHIIYSQAG----SIGKAIIELLMNSVDARATAVQLSMTKEG---FECSDDGNG 59 Query: 63 M-TSEEIPMAVQRHCT 77 + E++ R T Sbjct: 60 FASREDVIRYFGRFGT 75 >gi|311695418|gb|ADP98291.1| DNA topoisomerase IV, subunit B [marine bacterium HP15] Length = 631 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 6/49 (12%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A + R++ V+ G + D+G GM + Sbjct: 32 RPNHLAQEVIDNSVDEALAGHAKRIDVVLYSDG--SLSVEDDGRGMPVD 78 >gi|300814230|ref|ZP_07094506.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511654|gb|EFK38878.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 605 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 23/62 (37%) Query: 38 ESSRVETVI--------AGGGKSFF---------------QITDNGFGMTSEEIPMAVQR 74 +S++ I GGK + DNG G+ E++PM +R Sbjct: 488 GASQILINIISNALKYTKEGGKILIAAENYKNGKNNFVKISVKDNGIGIPKEDLPMIFER 547 Query: 75 HC 76 Sbjct: 548 FY 549 >gi|282882283|ref|ZP_06290915.1| multi-sensor signal transduction histidine kinase [Peptoniphilus lacrimalis 315-B] gi|281297877|gb|EFA90341.1| multi-sensor signal transduction histidine kinase [Peptoniphilus lacrimalis 315-B] Length = 581 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 23/62 (37%) Query: 38 ESSRVETVI--------AGGGKSFF---------------QITDNGFGMTSEEIPMAVQR 74 +S++ I GGK + DNG G+ E++PM +R Sbjct: 464 GASQILINIISNALKYTKEGGKILIAAENYKNGKNNFVKISVKDNGIGIPKEDLPMIFER 523 Query: 75 HC 76 Sbjct: 524 FY 525 >gi|257057723|ref|YP_003135555.1| signal transduction histidine kinase regulating citrate/malate metabolism [Saccharomonospora viridis DSM 43017] gi|256587595|gb|ACU98728.1| signal transduction histidine kinase regulating citrate/malate metabolism [Saccharomonospora viridis DSM 43017] Length = 527 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 11/83 (13%) Query: 21 ERPSIAIKELIENSLDA--ES--SRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 + L++N+LDA + + +E + G + D+G G+ E Sbjct: 413 TDLVTVVGNLVDNALDAVRGAPEAWIEIDVRERDGAVSVVVRDSGPGVAPEIATEVFTHG 472 Query: 76 CTSKISDDFSNIHTFGFRGEALP 98 T+K ++ + RG L Sbjct: 473 FTTKAAEHGDS------RGLGLA 489 >gi|149184516|ref|ZP_01862834.1| topoisomeraseB subunit [Erythrobacter sp. SD-21] gi|148831836|gb|EDL50269.1| topoisomeraseB subunit [Erythrobacter sp. SD-21] Length = 662 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 6/48 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 + E+++NS+D A +SR+E + + ITDNG GM E P Sbjct: 50 VAEVLDNSMDEAVAGHASRIEVRLDEN--NRVTITDNGRGMPVAEHPK 95 >gi|319787874|ref|YP_004147349.1| PAS/PAC sensor hybrid histidine kinase [Pseudoxanthomonas suwonensis 11-1] gi|317466386|gb|ADV28118.1| PAS/PAC sensor hybrid histidine kinase [Pseudoxanthomonas suwonensis 11-1] Length = 638 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 15/85 (17%) Query: 23 PSIAIKELIENSLDA--ESSRVET----------VIAGGGKSFFQITDNGFGMTSEEIPM 70 + L+ N+ DA + RV + G +++DNG G+ ++ + Sbjct: 392 LESVVLNLVINARDALRGAGRVTISARPAESLPGDLPPGEYVSLKVSDNGSGIPADIVDK 451 Query: 71 AVQRHCTSK-I--SDDFSNIHTFGF 92 + T+K I T+GF Sbjct: 452 VFEPFFTTKPIGQGTGLGLSMTYGF 476 >gi|319651104|ref|ZP_08005238.1| DNA topoisomerase IV subunit B [Bacillus sp. 2_A_57_CT2] gi|317397274|gb|EFV77978.1| DNA topoisomerase IV subunit B [Bacillus sp. 2_A_57_CT2] Length = 642 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A S + +I + + DNG G+ Sbjct: 49 EIVDNSIDEALAGYCSEINVIIEKD--NSITVVDNGRGIP 86 >gi|297158796|gb|ADI08508.1| DNA gyrase subunit B [Streptomyces bingchenggensis BCW-1] Length = 680 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A + +E I GG ++ DNG G+ + Sbjct: 71 VQEVVDNSVDEALAGHADTIEVTILPDGG---VRVVDNGRGIPVD 112 >gi|291563505|emb|CBL42321.1| DNA topoisomerase IV subunit B [butyrate-producing bacterium SS3/4] Length = 639 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N++D A + + + G + DNG G+ E Sbjct: 42 EIVDNAVDEHLAGFCTEITVTLEADG--SCTVKDNGRGIPVE 81 >gi|229072282|ref|ZP_04205487.1| Sensor histidine kinase [Bacillus cereus F65185] gi|229082032|ref|ZP_04214520.1| Sensor histidine kinase [Bacillus cereus Rock4-2] gi|228701257|gb|EEL53755.1| Sensor histidine kinase [Bacillus cereus Rock4-2] gi|228710819|gb|EEL62789.1| Sensor histidine kinase [Bacillus cereus F65185] Length = 392 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 300 LIKNAIEAMSVGGTITIKVTVKDG--IIVQVKDEGCGIPKDKIPKLNEAFYTTK 351 >gi|229112238|ref|ZP_04241778.1| Sensor histidine kinase [Bacillus cereus Rock1-15] gi|229130055|ref|ZP_04259017.1| Sensor histidine kinase [Bacillus cereus BDRD-Cer4] gi|228653372|gb|EEL09248.1| Sensor histidine kinase [Bacillus cereus BDRD-Cer4] gi|228671222|gb|EEL26526.1| Sensor histidine kinase [Bacillus cereus Rock1-15] Length = 308 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 216 LIKNAIEAMSVGGTITIKVTVKDG--IIVQVKDEGCGIPKDKIPKLNEAFYTTK 267 >gi|229181098|ref|ZP_04308430.1| Sensor histidine kinase [Bacillus cereus 172560W] gi|229193060|ref|ZP_04320015.1| Sensor histidine kinase [Bacillus cereus ATCC 10876] gi|228590324|gb|EEK48188.1| Sensor histidine kinase [Bacillus cereus ATCC 10876] gi|228602289|gb|EEK59778.1| Sensor histidine kinase [Bacillus cereus 172560W] Length = 392 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 300 LIKNAIEAMSVGGTITIKVTVKDG--IIVQVKDEGCGIPKDKIPKLNEAFYTTK 351 >gi|213966260|ref|ZP_03394444.1| DNA gyrase, B subunit [Corynebacterium amycolatum SK46] gi|213951112|gb|EEB62510.1| DNA gyrase, B subunit [Corynebacterium amycolatum SK46] Length = 679 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 8/43 (18%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++ VE + GG Q+ DNG G+ E Sbjct: 44 EVVDNSVDEAMAGYATDVEVTLLEDGG---VQVRDNGRGIPVE 83 >gi|187933415|ref|YP_001884617.1| two-component sensor histidine kinase [Clostridium botulinum B str. Eklund 17B] gi|187721568|gb|ACD22789.1| two-component sensor histidine kinase [Clostridium botulinum B str. Eklund 17B] Length = 471 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 25 IAIKELIENSLD-AESSRVETVIAGGGKSFFQ-ITDNGFGMTSEEIPMAVQRHCT 77 I L++N++ +E + ++ + I DNG G+ E++ + T Sbjct: 367 QVILNLLDNAIKYSECTEIDIYMEHNEAYVIIYIADNGQGIPKEDLKNVFENFYT 421 >gi|218235067|ref|YP_002369578.1| sporulation kinase [Bacillus cereus B4264] gi|218163024|gb|ACK63016.1| sporulation kinase [Bacillus cereus B4264] Length = 406 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVKDG--IIVQVKDEGCGIPKDKIPKLNEAFYTTK 365 >gi|206969863|ref|ZP_03230817.1| sporulation kinase [Bacillus cereus AH1134] gi|206735551|gb|EDZ52719.1| sporulation kinase [Bacillus cereus AH1134] Length = 406 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVKDG--IIVQVKDEGCGIPKDKIPKLNEAFYTTK 365 >gi|161506253|ref|YP_001573365.1| DNA topoisomerase IV subunit B [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867600|gb|ABX24223.1| hypothetical protein SARI_04448 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 630 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + RV+ ++ ++ D+G GM EE + Sbjct: 30 TRPNHLGQEVIDNSVDEALAGHAKRVDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 88 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDGQIYNIAFENGEK 146 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP--KVSF 184 + +F S + + + V++ A+ P +++F Sbjct: 147 VQDLQVTGTCGKRNTGTSVHFW----PDESFFDSPRFSVSRLLHVLKAKAVLCPGVEITF 202 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 S + N E ++ + Sbjct: 203 KDEVNNSEQRWCYQDGLNDYLGEAVNGL 230 >gi|149173454|ref|ZP_01852084.1| sensor histidine kinase [Planctomyces maris DSM 8797] gi|148847636|gb|EDL61969.1| sensor histidine kinase [Planctomyces maris DSM 8797] Length = 480 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 30 LIENSLDA--ESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI N++DA E +E GG+ I D+G G+ E+ Q + T+K Sbjct: 365 LILNAMDATEEGESIEITTEARGGQIVISIHDDGEGIREEDKARLFQPYFTTK 417 >gi|78355925|ref|YP_387374.1| periplasmic sensor signal transduction histidine kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218330|gb|ABB37679.1| periplasmic sensor signal transduction histidine kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 840 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 30 LIENSLDA--ESS-RVETVI--AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N+LDA ++ V I GG ++ DNG G+ +++ ++K Sbjct: 733 LVINALDACPDADGEVLVRISPRSGGMIAIEVADNGPGILPDDMSHVFDPFFSTK 787 >gi|30022843|ref|NP_834474.1| sporulation kinase [Bacillus cereus ATCC 14579] gi|296505242|ref|YP_003666942.1| sporulation kinase [Bacillus thuringiensis BMB171] gi|29898402|gb|AAP11675.1| Sporulation kinase [Bacillus cereus ATCC 14579] gi|296326294|gb|ADH09222.1| sporulation kinase [Bacillus thuringiensis BMB171] Length = 406 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVKDG--IIVQVKDEGCGIPKDKIPKLNEAFYTTK 365 >gi|313499515|gb|ADR60881.1| Integral membrane sensor signal transduction histidine kinase [Pseudomonas putida BIRD-1] Length = 428 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 21 ERPSI---AIKELIENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 RP + L++N+L A ++ ++ G + ++ DNG G+ +E+ ++ Sbjct: 322 TRPHALRRVLVNLVDNALKFAGAAELQVS-REGSTTIIRVLDNGPGIPGDELDEVLKPFY 380 >gi|298682185|gb|ADI95253.1| integral membrane sensor signal transduction histidine kinase [Pseudomonas putida] Length = 428 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 21 ERPSI---AIKELIENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 RP + L++N+L A ++ ++ G + ++ DNG G+ +E+ ++ Sbjct: 322 TRPHALRRVLVNLVDNALKFAGAAELQVS-REGSTTIIRVLDNGPGIPGDELDEVLKPFY 380 >gi|284039451|ref|YP_003389381.1| histidine kinase [Spirosoma linguale DSM 74] gi|283818744|gb|ADB40582.1| histidine kinase [Spirosoma linguale DSM 74] Length = 663 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 9/56 (16%) Query: 30 LIENSLD---------AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L+ N++ A S+ V + G ++D G G+ + +P R Sbjct: 264 LLANAIKFTTGPATQKAGSTHVTVRLENGSPIRLSVSDTGIGIPTANLPHIFDRFY 319 >gi|149184514|ref|ZP_01862832.1| Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Erythrobacter sp. SD-21] gi|148831834|gb|EDL50267.1| Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Erythrobacter sp. SD-21] Length = 498 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 20/79 (25%) Query: 4 RKLSEKIINQIAAGEIIERPSIAIKELIENSL-----D-AESSRVETVIAGG---GKSFF 54 + + E ++IA +I++ LIEN++ D A E +I G G Sbjct: 373 KSIPELESDRIAVEQILQN-------LIENAIKYSSPDRAG----EIIIEGSQAVGTVRI 421 Query: 55 QITDNGFGMTSEEIPMAVQ 73 + DNG G+ E+ + Sbjct: 422 DVIDNGRGIAPEDQERIFE 440 >gi|134085411|ref|NP_001076826.1| MORC family CW-type zinc finger 2 [Xenopus (Silurana) tropicalis] gi|134026036|gb|AAI35502.1| morc2 protein [Xenopus (Silurana) tropicalis] Length = 943 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVET-VIA----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ + GG + D+G GM E +Q ++K + + Sbjct: 35 ELVDNARDADATRIDIFTVKREELRGGFMLCFL-DDGAGMDPSEAASVIQFGRSAKRTPE 93 Query: 84 FSNIHTFG 91 I +G Sbjct: 94 SIQIGQYG 101 >gi|148548501|ref|YP_001268603.1| integral membrane sensor signal transduction histidine kinase [Pseudomonas putida F1] gi|148512559|gb|ABQ79419.1| integral membrane sensor signal transduction histidine kinase [Pseudomonas putida F1] Length = 428 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 21 ERPSI---AIKELIENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 RP + L++N+L A ++ ++ G + ++ DNG G+ +E+ ++ Sbjct: 322 TRPHALRRVLVNLVDNALKFAGAAELQVS-REGSTTIIRVLDNGPGIPGDELDEVLKPFY 380 >gi|229147346|ref|ZP_04275695.1| Sensor histidine kinase [Bacillus cereus BDRD-ST24] gi|228636028|gb|EEK92509.1| Sensor histidine kinase [Bacillus cereus BDRD-ST24] Length = 334 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 242 LIKNAIEAMSVGGTITIKVTVKDG--IIVQVKDEGCGIPKDKIPKLNEAFYTTK 293 >gi|330975950|gb|EGH76016.1| GAF:ATP-binding region, ATPase-like:histidine kinase A [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 745 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 7/64 (10%) Query: 21 ERPSIAIKELIENSLDAESS----RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRH 75 ER + L+ N++ + + +++ G + D+G G+ E++P +R+ Sbjct: 639 ERLFQVLSNLVGNAI--KFTPKLGKIDVSAMSNGSEIVFTVRDSGEGIPPEQLPHIFERY 696 Query: 76 CTSK 79 T K Sbjct: 697 WTVK 700 >gi|330994149|ref|ZP_08318077.1| DNA gyrase subunit B [Gluconacetobacter sp. SXCC-1] gi|329758616|gb|EGG75132.1| DNA gyrase subunit B [Gluconacetobacter sp. SXCC-1] Length = 680 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N++D A ++ ++ + G I DNG G+ + Sbjct: 73 EILDNAMDEAVAGHATTIDVSLEAG--DCLTIRDNGRGIPVD 112 >gi|325262530|ref|ZP_08129267.1| sensory transduction histidine kinase [Clostridium sp. D5] gi|324032362|gb|EGB93640.1| sensory transduction histidine kinase [Clostridium sp. D5] Length = 186 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 5/50 (10%) Query: 32 ENSLDAESSRVETVI----AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 ENS+ A +S +E + + I D+G GM++E++ T Sbjct: 14 ENSVRAGASLIEIGVSVQTEEDTLT-VVIKDDGCGMSAEQVEKVQDPFYT 62 >gi|320095172|ref|ZP_08026878.1| sensor histidine kinase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977877|gb|EFW09514.1| sensor histidine kinase [Actinomyces sp. oral taxon 178 str. F0338] Length = 715 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Query: 36 DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 DA + R+ + G ++DNG G+ E + + H T+K Sbjct: 615 DAPA-RITIRVRPDGDGVAITVSDNGPGIAPEVVDKIFEPHFTTK 658 >gi|289674403|ref|ZP_06495293.1| GAF:ATP-binding region, ATPase-like:histidine kinase A, N-terminal [Pseudomonas syringae pv. syringae FF5] Length = 747 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 7/64 (10%) Query: 21 ERPSIAIKELIENSLDAESS----RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRH 75 ER + L+ N++ + + +++ G + D+G G+ E++P +R+ Sbjct: 639 ERLFQVLSNLVGNAI--KFTPKLGKIDVSAMSNGSEIVFTVRDSGEGIPPEQLPHIFERY 696 Query: 76 CTSK 79 T K Sbjct: 697 WTVK 700 >gi|229048478|ref|ZP_04194041.1| Sensor histidine kinase [Bacillus cereus AH676] gi|228722843|gb|EEL74225.1| Sensor histidine kinase [Bacillus cereus AH676] Length = 334 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 242 LIKNAIEAMSVGGTITIKVTVKDG--IIVQVKDEGCGIPKDKIPKLNEAFYTTK 293 >gi|119487794|ref|ZP_01621303.1| DNA topoisomerase IV subunit B [Lyngbya sp. PCC 8106] gi|119455627|gb|EAW36764.1| DNA topoisomerase IV subunit B [Lyngbya sp. PCC 8106] Length = 645 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E G +TD+G G+ + Sbjct: 39 VYEVVDNSIDEALAGHCTHIEVDFNADG--SVTVTDDGRGIPVD 80 >gi|319898246|ref|YP_004158339.1| two-component sensor kinase BatS [Bartonella clarridgeiae 73] gi|319402210|emb|CBI75741.1| two-component sensor kinase BatS [Bartonella clarridgeiae 73] Length = 590 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 13/68 (19%) Query: 22 RPSIAIKELIENSLDAES------SRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQR 74 R I LIEN A S ++ + + + DNG G+ SE I +R Sbjct: 474 RLGQVISNLIEN---ARSFVPRKNGKICITMKNNASNLILTVEDNGPGIRSENIERIFER 530 Query: 75 HCT---SK 79 T SK Sbjct: 531 FYTDRPSK 538 >gi|296392546|ref|YP_003657430.1| DNA gyrase subunit B [Segniliparus rotundus DSM 44985] gi|296179693|gb|ADG96599.1| DNA gyrase, B subunit [Segniliparus rotundus DSM 44985] Length = 673 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 31/178 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE---------EIPMAV 72 ++E+++NS+D A ++RV+ + A GG ++ D+G G+ E+ + V Sbjct: 46 VQEVVDNSVDEAMAGYATRVDVTLLADGG---VEVVDDGRGIPVAPHASGPPTVEVVLTV 102 Query: 73 QRHCTSKISDDFSNIHTFGFRGEALPSIGAVS---HLTLMSRPPQNNTGAQIAISGEKIS 129 H K D + + G G + + A+S + + + + K Sbjct: 103 L-HAGGKFDSDSYAV-SGGLHGVGISVVNALSYKLEVEI----DVDGFHWSQSYDKAKPG 156 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFS 187 + T VR + ++ + + I ++ MA + T + Sbjct: 157 PLTKGDPVKRTGTTVR-FWADPEI----FETTHYDFDTIARRLQEMAFLNKGLIITLT 209 >gi|194339053|gb|ACF49442.1| GyrB [Amycolatopsis alba] Length = 449 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 19/77 (24%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE----------EIPMA 71 ++E+++NS+D A +++VE + + GG ++ D+G G+ + E+ + Sbjct: 6 VQEVVDNSVDEAMAGFATKVEVTLLSDGG---VRVVDDGRGIPVDIHPKEQKPTLEVVLT 62 Query: 72 VQRHCTSKISDDFSNIH 88 V H K D + Sbjct: 63 VL-HAGGKFDSDSYAVS 78 >gi|167770843|ref|ZP_02442896.1| hypothetical protein ANACOL_02196 [Anaerotruncus colihominis DSM 17241] gi|167666883|gb|EDS11013.1| hypothetical protein ANACOL_02196 [Anaerotruncus colihominis DSM 17241] Length = 662 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A +++E + G +++DNG G+ Sbjct: 63 VYEIVDNSIDEALAGHCTKIEVDLLPGNI--VKVSDNGRGIP 102 >gi|50953931|ref|YP_061219.1| DNA gyrase subunit B [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950413|gb|AAT88114.1| DNA gyrase subunit B [Leifsonia xyli subsp. xyli str. CTCB07] Length = 663 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 6/47 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A + +E +I G ++ DNG G+ +E P Sbjct: 48 VYEIVDNSVDEALAGYADNIEVMILPDG--SVRVFDNGRGIPVDEHP 92 >gi|33240384|ref|NP_875326.1| heat shock protein 90 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237911|gb|AAP99978.1| HSP90 family molecular chaperone [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 633 Score = 45.8 bits (107), Expect = 0.020, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 83/269 (30%), Gaps = 47/269 (17%) Query: 27 IKELIENSLDAESSR----------------VETVIAGGGKSFFQITDNGFGMTSEEIPM 70 ++EL+ N +DA S R +E I KS +DNG GM+S+E+ Sbjct: 32 LRELVSNGVDAISKRRMASIAGDCEPNEEAKIEINIDR-EKSTITFSDNGIGMSSDEVKK 90 Query: 71 AVQRHCTS----------KISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGA 119 + + S K + GF S V+ + ++++ + + A Sbjct: 91 YINQVAFSSAQEFLQKYEKEQEGIIGHFGLGF-----YSSFMVANKVEIITKSAKEGSTA 145 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 S T +E + I L + E +E I +I++ Sbjct: 146 VKW-------SCDGSPNFSLTEIEREEAGTDIILYLMQEEIEYIEPARIKTLIKKYCDFM 198 Query: 180 P-KVSFTFSTIKSNRYKMNFQSTNGNFPERI---SQVIGEDFINNAVELNEKSNEITLQG 235 P V F+ +I + + I + LQG Sbjct: 199 PVDVQFSGESINRRNPPWRTSPQDMQEKDYIELYKYLYPFQGDPLFWIHLNTDYPYNLQG 258 Query: 236 YTGIPTFNRG---NANQFYVFINGRTVQD 261 P + + + ++ N V D Sbjct: 259 ILFFPKISGRADWESGEIKLYSNHVFVSD 287 >gi|303229212|ref|ZP_07316011.1| DNA gyrase, B subunit [Veillonella atypica ACS-134-V-Col7a] gi|302516122|gb|EFL58065.1| DNA gyrase, B subunit [Veillonella atypica ACS-134-V-Col7a] Length = 633 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A ++ +E I + + D+G G+ Sbjct: 40 VYEVVDNSVDEALAGYATHIEVSINED--NSITVVDDGRGIP 79 >gi|303230676|ref|ZP_07317426.1| DNA gyrase, B subunit [Veillonella atypica ACS-049-V-Sch6] gi|302514731|gb|EFL56723.1| DNA gyrase, B subunit [Veillonella atypica ACS-049-V-Sch6] Length = 633 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A ++ +E I + + D+G G+ Sbjct: 40 VYEVVDNSVDEALAGYATHIEVSINED--NSITVVDDGRGIP 79 >gi|294011811|ref|YP_003545271.1| hypothetical protein SJA_C1-18250 [Sphingobium japonicum UT26S] gi|292675141|dbj|BAI96659.1| hypothetical protein SJA_C1-18250 [Sphingobium japonicum UT26S] Length = 553 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 20/132 (15%) Query: 23 PSIAIKELIENSLDAESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTS--- 78 P AI E+++NS A +S V+ + G I D+G G+ + + H S Sbjct: 27 PEDAIAEILQNSRRAGASCVDIDLLNRAGHPVLTIRDDGIGID-DPAALLALGH--SGWG 83 Query: 79 -KISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQ-----IAISGEKISSVR 132 KI+ + G + S+ + + S +G + A S ++ ++ Sbjct: 84 DKIAQA-EDPAGMG-----VFSLAGL-RVEYRSYSHSAKSGWRVIIDGDAWSHQRPIAIE 136 Query: 133 PVAMNPGTIVEV 144 P + GT + + Sbjct: 137 PFDHSNGTEIHI 148 >gi|282863315|ref|ZP_06272374.1| DNA gyrase, B subunit [Streptomyces sp. ACTE] gi|282561650|gb|EFB67193.1| DNA gyrase, B subunit [Streptomyces sp. ACTE] Length = 689 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I A GG ++ DNG G+ Sbjct: 67 VQEVVDNSVDEAMAGHADTIDVTILADGG---VRVVDNGRGIP 106 >gi|290958999|ref|YP_003490181.1| DNA gyrase subunit B [Streptomyces scabiei 87.22] gi|260648525|emb|CBG71636.1| DNA gyrase subunit B [Streptomyces scabiei 87.22] Length = 681 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I A GG ++ DNG G+ Sbjct: 62 VQEVVDNSVDEALAGHADTIDVTILADGG---VRVVDNGRGIP 101 >gi|320009755|gb|ADW04605.1| DNA gyrase, B subunit [Streptomyces flavogriseus ATCC 33331] Length = 689 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I A GG ++ DNG G+ Sbjct: 67 VQEVVDNSVDEAMAGHADTIDVTIFADGG---VRVVDNGRGIP 106 >gi|302559661|ref|ZP_07312003.1| DNA gyrase, B subunit [Streptomyces griseoflavus Tu4000] gi|302477279|gb|EFL40372.1| DNA gyrase, B subunit [Streptomyces griseoflavus Tu4000] Length = 686 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I A GG ++ DNG G+ Sbjct: 67 VQEVVDNSVDEALAGHADTIDVTILADGG---VRVVDNGRGIP 106 >gi|300771713|ref|ZP_07081588.1| phosphate regulon sensor histidine kinase protein PhoR [Sphingobacterium spiritivorum ATCC 33861] gi|300761702|gb|EFK58523.1| phosphate regulon sensor histidine kinase protein PhoR [Sphingobacterium spiritivorum ATCC 33861] Length = 343 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 45/128 (35%), Gaps = 54/128 (42%) Query: 3 IRKLSEKIINQIAAGEI---IE--RPSIAIKELIENSLD--AESSRVETVIAG------- 48 I L E I+++ +G I IE S IKE IEN LD A S +++ V Sbjct: 171 IHDLDE--ISKLESGRISLNIEKFDLSELIKETIEN-LDDKARSQKIDIVFKQKYQNVTF 227 Query: 49 -------------------------GGKSFFQ-----------ITDNGFGMTSEEIPMAV 72 GG + + +TD+G G+ + +P Sbjct: 228 VKADRKKIQQVLTNLIDNSIKYGKTGGSTDIRIFPLFEQVLVEVTDDGQGIEEKNLPRVF 287 Query: 73 QRHC-TSK 79 +R T K Sbjct: 288 ERFYRTDK 295 >gi|238018216|ref|ZP_04598642.1| hypothetical protein VEIDISOL_00040 [Veillonella dispar ATCC 17748] gi|237864687|gb|EEP65977.1| hypothetical protein VEIDISOL_00040 [Veillonella dispar ATCC 17748] Length = 633 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A ++ +E I + + D+G G+ Sbjct: 40 VYEVVDNSVDEALAGYATHIEVSINED--NSITVVDDGRGIP 79 >gi|228961050|ref|ZP_04122677.1| Sensor histidine kinase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798595|gb|EEM45581.1| Sensor histidine kinase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 334 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 242 LIKNAIEAMSVGGTITIKVTVKDG--IIVQVKDEGCGIPKDKIPKLNEAFYTTK 293 >gi|256379697|ref|YP_003103357.1| histidine kinase [Actinosynnema mirum DSM 43827] gi|255924000|gb|ACU39511.1| histidine kinase [Actinosynnema mirum DSM 43827] Length = 455 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 23 PSIAIKELIENSLD-AESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTS 78 + EL+ N++ + ++ + G+ +TDNG G+ +E A+ R S Sbjct: 349 LGSVLDELVGNAIRLSGATEIRIWAGTAGEDVELHVTDNGTGLDDQERANALSRFWRS 406 >gi|194339057|gb|ACF49444.1| GyrB [Amycolatopsis australiensis] Length = 451 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 19/77 (24%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE----------EIPMA 71 ++E+++NS+D A +++VE + A GG ++ D+G G+ E E+ + Sbjct: 7 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVEMHPKEQKPTIEVVLT 63 Query: 72 VQRHCTSKISDDFSNIH 88 V H K D + Sbjct: 64 VL-HAGGKFDSDSYAVS 79 >gi|161898002|gb|ABX80110.1| DNA gyrase subunit B [Streptomyces swartbergensis] Length = 483 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I A GG ++ DNG G+ Sbjct: 17 VQEVVDNSVDEALAGYADTIDVTILADGG---VRVVDNGRGIP 56 >gi|149371940|ref|ZP_01891259.1| sensor histidine kinase [unidentified eubacterium SCB49] gi|149355080|gb|EDM43641.1| sensor histidine kinase [unidentified eubacterium SCB49] Length = 381 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Query: 30 LIENSLDA--ESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N +DA + + G +ITD G G+ ++ + T+K Sbjct: 286 LVKNGIDAMRGKGTISIKMEHKGNLVIIKITDAGKGIPKKDFKNVFRPGFTTK 338 >gi|303256368|ref|ZP_07342382.1| DNA gyrase, B subunit [Burkholderiales bacterium 1_1_47] gi|331001506|ref|ZP_08325124.1| DNA gyrase, B subunit [Parasutterella excrementihominis YIT 11859] gi|302859859|gb|EFL82936.1| DNA gyrase, B subunit [Burkholderiales bacterium 1_1_47] gi|329568235|gb|EGG50052.1| DNA gyrase, B subunit [Parasutterella excrementihominis YIT 11859] Length = 836 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I + DNG G+ ++ Sbjct: 52 EVVDNSIDEALAGYADHINVTINRD--ESITVVDNGRGIPTD 91 >gi|255280496|ref|ZP_05345051.1| sensor histidine kinase [Bryantella formatexigens DSM 14469] gi|255268961|gb|EET62166.1| sensor histidine kinase [Bryantella formatexigens DSM 14469] Length = 395 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 14/102 (13%) Query: 41 RVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRGEALPS 99 R+ + G +I DNG G+ +E+P R D S + G G Sbjct: 306 RINIRVKDVGDFVQIEIEDNGRGIGPKELPYIFDRFY----RTDASRNSSMGGSG----- 356 Query: 100 IGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPGTI 141 IG L+++ + +++ G A S +V + T+ Sbjct: 357 IG----LSIVKKIVEDHGGKIWATSKPGTGTVMYFVLRKVTV 394 >gi|49475554|ref|YP_033595.1| DNA topoisomerase IV subunit B [Bartonella henselae str. Houston-1] gi|49238360|emb|CAF27584.1| DNA gyrase subunit B [Bartonella henselae str. Houston-1] Length = 685 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 6/45 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 E+I+N++D A + ++ + G + +TDNG G+ E P Sbjct: 82 EIIDNAMDEAVAGYADFIDVSLEKNG--YLTVTDNGRGIPVENHP 124 >gi|310778264|ref|YP_003966597.1| histidine kinase [Ilyobacter polytropus DSM 2926] gi|309747587|gb|ADO82249.1| histidine kinase [Ilyobacter polytropus DSM 2926] Length = 426 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 14/35 (40%) Query: 47 AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 G+ DNG G+ + + T+KI+ Sbjct: 356 EQDGRDVVVFEDNGCGIPEDNLSKVFSPFYTTKIN 390 >gi|301308180|ref|ZP_07214134.1| DNA gyrase, B subunit [Bacteroides sp. 20_3] gi|300833650|gb|EFK64266.1| DNA gyrase, B subunit [Bacteroides sp. 20_3] Length = 651 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + ++ VI + +TD+G G+ + Sbjct: 46 VYEVVDNSIDEALAGYCTYIDVVINED--NSITVTDDGRGIPVD 87 >gi|298374500|ref|ZP_06984458.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_19] gi|298268868|gb|EFI10523.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_19] Length = 651 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + ++ VI + +TD+G G+ + Sbjct: 46 VYEVVDNSIDEALAGYCTYIDVVINED--NSITVTDDGRGIPVD 87 >gi|283852478|ref|ZP_06369746.1| DNA gyrase, B subunit [Desulfovibrio sp. FW1012B] gi|283572086|gb|EFC20078.1| DNA gyrase, B subunit [Desulfovibrio sp. FW1012B] Length = 806 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 79/250 (31%), Gaps = 39/250 (15%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ----- 73 + E+++NS+D A R+ + G ++DNG G+ +E AV+ Sbjct: 46 VYEVVDNSIDEAMAGYCDRINVAVHLDG--SVTVSDNGRGIPVDMHPKEHRPAVEVVMTV 103 Query: 74 RHCTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVR 132 H K +D + + G G + + A+S L + R K R Sbjct: 104 LHAGGKFDNDTYKV-SGGLHGVGVSVVNALSEYLEVTVRRNG------------KKYQQR 150 Query: 133 PVAMNPGTIVEVRDLFFTIPARLNFLK------SEQVETNLITDVIRRMAIAYPKVSFTF 186 P T V V + F + Q + +A + F Sbjct: 151 YERGVPVTQVTVIGEAENTGTTIRFKPDEEIFETNQFSHETLAKRFEELAYLNRGLEIDF 210 Query: 187 STIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGN 246 ++ ++ G GE I++ +E + + + + +N Sbjct: 211 R-DDRTSERVTYRFDGGIKRFVADLNAGEPVIHDIIEGLAEMDGVVVDFAL---QYNANY 266 Query: 247 ANQFYVFING 256 + Y F N Sbjct: 267 KEEVYTFANN 276 >gi|256838953|ref|ZP_05544463.1| DNA gyrase, B subunit [Parabacteroides sp. D13] gi|262382583|ref|ZP_06075720.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_33B] gi|256739872|gb|EEU53196.1| DNA gyrase, B subunit [Parabacteroides sp. D13] gi|262295461|gb|EEY83392.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_33B] Length = 651 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + ++ VI + +TD+G G+ + Sbjct: 46 VYEVVDNSIDEALAGYCTYIDVVINED--NSITVTDDGRGIPVD 87 >gi|255012609|ref|ZP_05284735.1| DNA gyrase, B subunit [Bacteroides sp. 2_1_7] Length = 620 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + ++ VI + +TD+G G+ + Sbjct: 15 VYEVVDNSIDEALAGYCTYIDVVINED--NSITVTDDGRGIPVD 56 >gi|209883685|ref|YP_002287542.1| DNA gyrase, B subunit [Oligotropha carboxidovorans OM5] gi|209871881|gb|ACI91677.1| DNA gyrase, B subunit [Oligotropha carboxidovorans OM5] Length = 812 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A ++RVE ++ G + D+G G+ ++ Sbjct: 54 VYEVVDNAIDEALAGYATRVEVILNPDG--SVTVRDDGRGIPTD 95 >gi|150010130|ref|YP_001304873.1| DNA gyrase subunit B [Parabacteroides distasonis ATCC 8503] gi|149938554|gb|ABR45251.1| DNA gyrase, B subunit [Parabacteroides distasonis ATCC 8503] Length = 651 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + ++ VI + +TD+G G+ + Sbjct: 46 VYEVVDNSIDEALAGYCTYIDVVINED--NSITVTDDGRGIPVD 87 >gi|157369309|ref|YP_001477298.1| histidine kinase [Serratia proteamaculans 568] gi|157321073|gb|ABV40170.1| histidine kinase [Serratia proteamaculans 568] Length = 585 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Query: 30 LIENSLDAESSRVE--TVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ NSL A + ++ + + + D+G G+ +E++ + +SK Sbjct: 477 LLSNSLQAGAQQITLRLEVDQHQQRLI-VEDDGGGLNAEQLTLPFVPFRSSK 527 >gi|167648606|ref|YP_001686269.1| integral membrane sensor signal transduction histidine kinase [Caulobacter sp. K31] gi|167351036|gb|ABZ73771.1| integral membrane sensor signal transduction histidine kinase [Caulobacter sp. K31] Length = 466 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 31 IENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 +EN++D A + + ++ D+G G + E + + + TS Sbjct: 357 VENAVDFARAEVIVIARFDARAVVIEVRDDGPGFSPEILAKLGEPYVTS 405 >gi|145224469|ref|YP_001135147.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium gilvum PYR-GCK] gi|315444805|ref|YP_004077684.1| histidine kinase [Mycobacterium sp. Spyr1] gi|145216955|gb|ABP46359.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium gilvum PYR-GCK] gi|315263108|gb|ADT99849.1| histidine kinase [Mycobacterium sp. Spyr1] Length = 380 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 10/79 (12%) Query: 1 MKIRKLSEKIINQIAAGEIIERPSIAIKELIENSL--DAESSRVETVI-AGGGKSFFQIT 57 M R+L + A E +R S + L++N+L A RVE G + +T Sbjct: 256 MSARELP-----LLRADE--QRLSQVLDNLLDNALRHTARGGRVEIHCHTEGARVRIAVT 308 Query: 58 DNGFGMTSEEIPMAVQRHC 76 D+G G+ +E + +R Sbjct: 309 DDGEGIAAEHLSSVFERFY 327 >gi|322370369|ref|ZP_08044928.1| DNA topoisomerase VI subunit B [Haladaptatus paucihalophilus DX253] gi|320550077|gb|EFW91732.1| DNA topoisomerase VI subunit B [Haladaptatus paucihalophilus DX253] Length = 802 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 61/187 (32%), Gaps = 35/187 (18%) Query: 23 PSIAIKELIENSLDA--ESS---RVETVIAGGG--KSFFQITDNGFGMTSEEIPMAV--- 72 A+KE ++N+LDA E+ V I G + D G G+T E+IP Sbjct: 43 LVTAVKEAVDNALDASEEARLKPFVRVKIEEVGDYYRLI-VEDEGPGITREQIPKVFGKL 101 Query: 73 ---QRHCTSKISDDFSNIHTFGFRGEALPSIGAV--SHLT------LMSRPPQNN--TGA 119 R + G +G + AV S LT + S+P ++ Sbjct: 102 LYGSRFH--------KREQSRGQQGIGIS--AAVLYSQLTSGKPAKITSKPKGSDRQRYF 151 Query: 120 QIAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 ++ I ++ + + L + + LI I+ A+ Sbjct: 152 ELIIDTDENEPEIQSESDTPPVGRELVGTHGTRIELEMEANMRARQQLIR-YIKHTAVVN 210 Query: 180 PKVSFTF 186 P F Sbjct: 211 PHAKIVF 217 >gi|313204046|ref|YP_004042703.1| integral membrane sensor signal transduction histidine kinase [Paludibacter propionicigenes WB4] gi|312443362|gb|ADQ79718.1| integral membrane sensor signal transduction histidine kinase [Paludibacter propionicigenes WB4] Length = 459 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 5/53 (9%) Query: 30 LIENSLDAESSRVETVIA----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 L+EN++ + V+ I G + DNG G+++ ++ R S Sbjct: 357 LVENAIKYSNKEVDINIEIVDVNEGIK-ISVKDNGLGISAYDLKFIFDRFYRS 408 >gi|222628592|gb|EEE60724.1| hypothetical protein OsJ_14235 [Oryza sativa Japonica Group] Length = 788 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 11/71 (15%) Query: 29 ELIENSLDA---ESSRVETVIAGGGKSFFQ---ITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++NSLD ++ V + K + + D+G GM +++ + + SK+ Sbjct: 146 ELLDNSLDEVINGATYVNIDMLENNKDKTRMLLVEDDGGGMDPDKMRQCMSLGYSAKSKV 205 Query: 81 SDDFSNIHTFG 91 + I +G Sbjct: 206 AS---TIGQYG 213 >gi|194380232|dbj|BAG63883.1| unnamed protein product [Homo sapiens] Length = 963 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 16/73 (21%) Query: 29 ELIENSLDAESSRVET-VIAG----GGKSFFQITDNGFGMTSEEIP--MAVQRHCTSKIS 81 EL++N+ DA + R++ + GG D+G GM+ EE + R SK Sbjct: 34 ELLDNARDAGAERLDVFSVDNEKLQGGFMLC-CLDDGCGMSPEEASDIIYFGR---SK-- 87 Query: 82 DDFSNIHTFGFRG 94 + T F G Sbjct: 88 ---KRLSTLKFIG 97 >gi|116309094|emb|CAH66201.1| OSIGBa0148D14.7 [Oryza sativa Indica Group] Length = 772 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 11/71 (15%) Query: 29 ELIENSLDA---ESSRVETVIAGGGKSFFQ---ITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++NSLD ++ V + K + + D+G GM +++ + + SK+ Sbjct: 146 ELLDNSLDEVINGATYVNIDMLENNKDKTRMLLVEDDGGGMDPDKMRQCMSLGYSAKSKV 205 Query: 81 SDDFSNIHTFG 91 + I +G Sbjct: 206 AS---TIGQYG 213 >gi|58585021|ref|YP_198594.1| DNA gyrase, topoisomerase II, B subunit, GyrB [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419337|gb|AAW71352.1| DNA gyrase, topoisomerase II, B subunit, GyrB [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 792 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A ++E I G +TDNG G+ ++ Sbjct: 40 VYEVVDNAIDESLAGYCDKIEVSINEDG--SVSVTDNGRGIPTD 81 >gi|255307672|ref|ZP_05351843.1| two-component sensor histidine kinase [Clostridium difficile ATCC 43255] gi|306520996|ref|ZP_07407343.1| two-component sensor histidine kinase [Clostridium difficile QCD-32g58] Length = 441 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Query: 30 LIENSL----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ D +V V+ K ++ DNG G+ E++ +R Sbjct: 326 LVDNAIKYTQDNGIVQV-VVLKDEEKIVIKVIDNGVGIPKEDVERIFERFY 375 >gi|167470305|ref|ZP_02335009.1| DNA topoisomerase IV, B subunit [Yersinia pestis FV-1] Length = 593 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 69/204 (33%), Gaps = 23/204 (11%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + R++ ++ ++ D+G GM EE + Sbjct: 32 RPNHLGQEVIDNSVDEALAGHARRIDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAVE 89 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEK 127 + + R H K S+ + G G + + A+S + + R + Sbjct: 90 LILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDSQIYSIAFENGDKV 148 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--FT 185 + ++F S + + ++ +++ A+ P V F Sbjct: 149 QDLQVIGTCGKRNTGTSVHFW----PDVSFFDSPRFSVSRLSHLLKAKAVLCPGVEIVFK 204 Query: 186 FSTIKSNRYKMNFQSTNGNFPERI 209 + + E + Sbjct: 205 DQVNNTEQRWCYADGLTDYLMEAV 228 >gi|187918301|ref|YP_001883864.1| DNA gyrase subunit B [Borrelia hermsii DAH] gi|119861149|gb|AAX16944.1| DNA gyrase subunit B [Borrelia hermsii DAH] Length = 639 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 83/249 (33%), Gaps = 34/249 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IPMAVQR 74 + E+++NS+D A ++E VI + + DNG G+ EE + + + + Sbjct: 42 VYEVVDNSIDEALAGFCDKIEVVINSD--NSVTVNDNGRGIPTDVHEEEGISALELVLTK 99 Query: 75 -HCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEK 127 H K + + + G G AL S AV ++SR + Sbjct: 100 LHSGGKFNKGTYKV-SGGLHGVGISVVNALSSFLAV----IVSRDGKLFKQTYSRGIPTS 154 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFS 187 + V+ GT V A ++ + + ++ +R +A K+ + Sbjct: 155 EVDIIGVSSARGTKVT-------FLADSEIFETLEYDFETLSKRLRELAFLNDKIRISIE 207 Query: 188 TIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNA 247 +S + K G + + + + + G+ G + Sbjct: 208 DRRSGKEKFLEFYFEGGIKAFVDYITNNSKNIQNEPYFIEGSCDDVIVSVGLKW-TEGYS 266 Query: 248 NQFYVFING 256 + F+N Sbjct: 267 DHILSFVNN 275 >gi|149376129|ref|ZP_01893894.1| Na+/proline symporter [Marinobacter algicola DG893] gi|149359534|gb|EDM47993.1| Na+/proline symporter [Marinobacter algicola DG893] Length = 986 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 7/64 (10%) Query: 21 ERPSIAIKELIENSLDAESSRV--ETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +R L+ N+ DA S + E I G + ++TD+G G+ +++ + Sbjct: 864 QRLVQVFINLLANARDA--SPIGGEVRISGNRDGYSAIIEVTDDGSGIPKDQLDHIFEPF 921 Query: 76 CTSK 79 T+K Sbjct: 922 YTTK 925 >gi|51597693|ref|YP_071884.1| DNA topoisomerase IV subunit B [Yersinia pseudotuberculosis IP 32953] gi|186896834|ref|YP_001873946.1| DNA topoisomerase IV subunit B [Yersinia pseudotuberculosis PB1/+] gi|51590975|emb|CAH22633.1| topoisomerase IV subunit B [Yersinia pseudotuberculosis IP 32953] gi|186699860|gb|ACC90489.1| DNA topoisomerase IV, B subunit [Yersinia pseudotuberculosis PB1/+] Length = 631 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 69/204 (33%), Gaps = 23/204 (11%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + R++ ++ ++ D+G GM EE + Sbjct: 32 RPNHLGQEVIDNSVDEALAGHARRIDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAVE 89 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEK 127 + + R H K S+ + G G + + A+S + + R + Sbjct: 90 LILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDSQIYSIAFENGDKV 148 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--FT 185 + ++F S + + ++ +++ A+ P V F Sbjct: 149 QDLQVIGTCGKRNTGTSVHFW----PDVSFFDSPRFSVSRLSHLLKAKAVLCPGVEIVFK 204 Query: 186 FSTIKSNRYKMNFQSTNGNFPERI 209 + + E + Sbjct: 205 DQVNNTEQRWCYADGLTDYLMEAV 228 >gi|50119294|ref|YP_048461.1| DNA topoisomerase IV subunit B [Pectobacterium atrosepticum SCRI1043] gi|49609820|emb|CAG73254.1| topoisomerase IV subunit B [Pectobacterium atrosepticum SCRI1043] Length = 631 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 77/211 (36%), Gaps = 29/211 (13%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + R++ ++ ++ D+G GM EE + Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHARRIDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAIS 124 + + R H K S + G G + + A+S + + + + + Sbjct: 89 ELILCRLHAGGKFSGKNYQ-FSGGLHGVGISVVNALSTRVEVTVKRDGQVYDIAFENGDK 147 Query: 125 GEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 ++++ N GT V F S + + +T +++ A+ P V Sbjct: 148 VQELTVTGTCGRRNTGTRVHFW-------PDEKFFDSARFSVSRLTHLLKAKAVLCPGVE 200 Query: 184 --FTFSTIKSNRYKMNFQSTNGNFPERISQV 212 F + + N E I+ + Sbjct: 201 IIFKDKVNNTEQRWCYLDGLNDYLCEAINGL 231 >gi|49474260|ref|YP_032302.1| DNA topoisomerase IV subunit B [Bartonella quintana str. Toulouse] gi|49239764|emb|CAF26151.1| DNA gyrase subunit B [Bartonella quintana str. Toulouse] Length = 685 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 6/50 (12%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 E+I+N++D A + ++ + G + +TDNG G+ E P + + Sbjct: 82 EIIDNAMDEAVAGYADLIDVSLERNG--YLTVTDNGRGIPVENHPQMLDK 129 >gi|33592391|ref|NP_880035.1| DNA topoisomerase IV subunit B [Bordetella pertussis Tohama I] gi|33572036|emb|CAE41560.1| topoisomerase IV subunit B [Bordetella pertussis Tohama I] gi|332381807|gb|AEE66654.1| DNA topoisomerase IV subunit B [Bordetella pertussis CS] Length = 653 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 15/69 (21%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 E P ++E+I+N+ D A +++ + G G + D+G G+ EE + Sbjct: 31 ENPLHIVQEVIDNAADEALAGYGKQIQVTLHGDG--SISVEDDGRGIPVGLHPEENAPVV 88 Query: 69 PMAVQR-HC 76 + R H Sbjct: 89 ELVFTRLHA 97 >gi|33596500|ref|NP_884143.1| DNA topoisomerase IV subunit B [Bordetella parapertussis 12822] gi|33602205|ref|NP_889765.1| DNA topoisomerase IV subunit B [Bordetella bronchiseptica RB50] gi|33566269|emb|CAE37180.1| topoisomerase IV subunit B [Bordetella parapertussis] gi|33576643|emb|CAE33721.1| topoisomerase IV subunit B [Bordetella bronchiseptica RB50] Length = 670 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 15/69 (21%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 E P ++E+I+N+ D A +++ + G G + D+G G+ EE + Sbjct: 48 ENPLHIVQEVIDNAADEALAGYGKQIQVTLHGDG--SISVEDDGRGIPVGLHPEENAPVV 105 Query: 69 PMAVQR-HC 76 + R H Sbjct: 106 ELVFTRLHA 114 >gi|23978255|dbj|BAC21118.1| DNA gyrase B subunit [Oscillatoria sp. PCC 7112] Length = 396 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + +E + G +TD+G G+ Sbjct: 10 VYEVVDNSIDEALAGHCTHIEIDLNADG--SVTVTDDGRGIP 49 >gi|6647532|sp|Q9ZFK1|GYRB_BORHE RecName: Full=DNA gyrase subunit B gi|3859564|gb|AAC72846.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317666|gb|AAT99954.1| DNA gyrase subunit B [Borrelia hermsii DAH] gi|51317668|gb|AAT99955.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317670|gb|AAT99956.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317672|gb|AAT99957.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317674|gb|AAT99958.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317676|gb|AAT99959.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317678|gb|AAT99960.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317680|gb|AAT99961.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317682|gb|AAT99962.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317684|gb|AAT99963.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317686|gb|AAT99964.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317688|gb|AAT99965.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317690|gb|AAT99966.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317692|gb|AAT99967.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317694|gb|AAT99968.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317696|gb|AAT99969.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317698|gb|AAT99970.1| DNA gyrase subunit B [Borrelia hermsii] gi|51317700|gb|AAT99971.1| DNA gyrase subunit B [Borrelia hermsii] gi|112031373|gb|ABH88159.1| GyrB [Borrelia hermsii] gi|112031377|gb|ABH88161.1| GyrB [Borrelia hermsii] Length = 634 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 83/249 (33%), Gaps = 34/249 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IPMAVQR 74 + E+++NS+D A ++E VI + + DNG G+ EE + + + + Sbjct: 37 VYEVVDNSIDEALAGFCDKIEVVINSD--NSVTVNDNGRGIPTDVHEEEGISALELVLTK 94 Query: 75 -HCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEK 127 H K + + + G G AL S AV ++SR + Sbjct: 95 LHSGGKFNKGTYKV-SGGLHGVGISVVNALSSFLAV----IVSRDGKLFKQTYSRGIPTS 149 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFS 187 + V+ GT V A ++ + + ++ +R +A K+ + Sbjct: 150 EVDIIGVSSARGTKVT-------FLADSEIFETLEYDFETLSKRLRELAFLNDKIRISIE 202 Query: 188 TIKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNA 247 +S + K G + + + + + G+ G + Sbjct: 203 DRRSGKEKFLEFYFEGGIKAFVDYITNNSKNIQNEPYFIEGSCDDVIVSVGLKW-TEGYS 261 Query: 248 NQFYVFING 256 + F+N Sbjct: 262 DHILSFVNN 270 >gi|115524491|ref|YP_781402.1| ATPase domain-containing protein [Rhodopseudomonas palustris BisA53] gi|115518438|gb|ABJ06422.1| ATP-binding region, ATPase domain protein domain protein [Rhodopseudomonas palustris BisA53] Length = 870 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 13/70 (18%) Query: 22 RPSIAIKELIENSLDA-ESSR-----------VET-VIAGGGKSFFQITDNGFGMTSEEI 68 P++A++ELI+N+ DA ++ R + +++ GG+ + + DNG GM+ + + Sbjct: 382 DPTVALRELIQNAADAVQARRKHQRRAADWGLITVGLLSEGGQIWLVVEDNGIGMSEQVL 441 Query: 69 PMAVQRHCTS 78 + TS Sbjct: 442 TGPLLDFGTS 451 >gi|22127385|ref|NP_670808.1| DNA topoisomerase IV subunit B [Yersinia pestis KIM 10] gi|45442746|ref|NP_994285.1| DNA topoisomerase IV subunit B [Yersinia pestis biovar Microtus str. 91001] gi|108810691|ref|YP_646458.1| DNA topoisomerase IV subunit B [Yersinia pestis Nepal516] gi|145597760|ref|YP_001161836.1| DNA topoisomerase IV subunit B [Yersinia pestis Pestoides F] gi|150260300|ref|ZP_01917028.1| topoisomerase IV subunit B [Yersinia pestis CA88-4125] gi|153950532|ref|YP_001399571.1| DNA topoisomerase IV subunit B [Yersinia pseudotuberculosis IP 31758] gi|162420269|ref|YP_001604896.1| DNA topoisomerase IV subunit B [Yersinia pestis Angola] gi|165924916|ref|ZP_02220748.1| DNA topoisomerase IV, B subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165939896|ref|ZP_02228435.1| DNA topoisomerase IV, B subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166008986|ref|ZP_02229884.1| DNA topoisomerase IV, B subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166212022|ref|ZP_02238057.1| DNA topoisomerase IV, B subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167419067|ref|ZP_02310820.1| DNA topoisomerase IV, B subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425082|ref|ZP_02316835.1| DNA topoisomerase IV, B subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170022910|ref|YP_001719415.1| DNA topoisomerase IV subunit B [Yersinia pseudotuberculosis YPIII] gi|218927861|ref|YP_002345736.1| DNA topoisomerase IV subunit B [Yersinia pestis CO92] gi|229837350|ref|ZP_04457513.1| topoisomerase IV subunit B [Yersinia pestis Pestoides A] gi|229840562|ref|ZP_04460721.1| topoisomerase IV subunit B [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842890|ref|ZP_04463042.1| topoisomerase IV subunit B [Yersinia pestis biovar Orientalis str. India 195] gi|229900889|ref|ZP_04516013.1| topoisomerase IV subunit B [Yersinia pestis Nepal516] gi|270487739|ref|ZP_06204813.1| DNA topoisomerase IV, B subunit [Yersinia pestis KIM D27] gi|294502735|ref|YP_003566797.1| DNA topoisomerase IV subunit B [Yersinia pestis Z176003] gi|21960472|gb|AAM87059.1|AE013954_3 DNA topoisomerase IV subunit B [Yersinia pestis KIM 10] gi|45437612|gb|AAS63162.1| topoisomerase IV subunit B [Yersinia pestis biovar Microtus str. 91001] gi|108774339|gb|ABG16858.1| DNA topoisomerase IV subunit B [Yersinia pestis Nepal516] gi|115346472|emb|CAL19345.1| topoisomerase IV subunit B [Yersinia pestis CO92] gi|145209456|gb|ABP38863.1| DNA topoisomerase IV subunit B [Yersinia pestis Pestoides F] gi|149289708|gb|EDM39785.1| topoisomerase IV subunit B [Yersinia pestis CA88-4125] gi|152962027|gb|ABS49488.1| DNA topoisomerase IV, B subunit [Yersinia pseudotuberculosis IP 31758] gi|162353084|gb|ABX87032.1| DNA topoisomerase IV, B subunit [Yersinia pestis Angola] gi|165912207|gb|EDR30845.1| DNA topoisomerase IV, B subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165923116|gb|EDR40267.1| DNA topoisomerase IV, B subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165992325|gb|EDR44626.1| DNA topoisomerase IV, B subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166206768|gb|EDR51248.1| DNA topoisomerase IV, B subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166963061|gb|EDR59082.1| DNA topoisomerase IV, B subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167055845|gb|EDR65626.1| DNA topoisomerase IV, B subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169749444|gb|ACA66962.1| DNA topoisomerase IV, B subunit [Yersinia pseudotuberculosis YPIII] gi|229682228|gb|EEO78320.1| topoisomerase IV subunit B [Yersinia pestis Nepal516] gi|229690157|gb|EEO82214.1| topoisomerase IV subunit B [Yersinia pestis biovar Orientalis str. India 195] gi|229696928|gb|EEO86975.1| topoisomerase IV subunit B [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705473|gb|EEO91483.1| topoisomerase IV subunit B [Yersinia pestis Pestoides A] gi|262360767|gb|ACY57488.1| DNA topoisomerase IV subunit B [Yersinia pestis D106004] gi|262364712|gb|ACY61269.1| DNA topoisomerase IV subunit B [Yersinia pestis D182038] gi|270336243|gb|EFA47020.1| DNA topoisomerase IV, B subunit [Yersinia pestis KIM D27] gi|294353194|gb|ADE63535.1| DNA topoisomerase IV subunit B [Yersinia pestis Z176003] gi|320016769|gb|ADW00341.1| topoisomerase IV subunit B [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 631 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 69/204 (33%), Gaps = 23/204 (11%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + R++ ++ ++ D+G GM EE + Sbjct: 32 RPNHLGQEVIDNSVDEALAGHARRIDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAVE 89 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEK 127 + + R H K S+ + G G + + A+S + + R + Sbjct: 90 LILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDSQIYSIAFENGDKV 148 Query: 128 ISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--FT 185 + ++F S + + ++ +++ A+ P V F Sbjct: 149 QDLQVIGTCGKRNTGTSVHFW----PDVSFFDSPRFSVSRLSHLLKAKAVLCPGVEIVFK 204 Query: 186 FSTIKSNRYKMNFQSTNGNFPERI 209 + + E + Sbjct: 205 DQVNNTEQRWCYADGLTDYLMEAV 228 >gi|294675052|ref|YP_003575668.1| sensor histidine kinase [Prevotella ruminicola 23] gi|294473777|gb|ADE83166.1| sensor histidine kinase [Prevotella ruminicola 23] Length = 501 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 4/60 (6%) Query: 23 PSIAIKELIENSL--DAESSRVETVI--AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 S + L+EN++ E+ + G + DNG G+ + + S Sbjct: 390 LSNIVCNLLENAIKYSREAVTIRIDFLMREAGMVQISVADNGIGIAKADQRYVFDKFYRS 449 >gi|294146554|ref|YP_003559220.1| signal transduction histidine kinase [Sphingobium japonicum UT26S] gi|292676971|dbj|BAI98488.1| signal transduction histidine kinase [Sphingobium japonicum UT26S] Length = 532 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 30 LIENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L EN+ A +SR++ +A G ++ D+G G+ + TSK Sbjct: 439 LAENARQAGASRLDIGVALHQGAAWIDFADDGPGIPPGDRGRVFDLFFTSK 489 >gi|294677614|ref|YP_003578229.1| DNA topoisomerase IV subunit B [Rhodobacter capsulatus SB 1003] gi|3128305|gb|AAC16157.1| DNA gyrase subunit b [Rhodobacter capsulatus SB 1003] gi|294476434|gb|ADE85822.1| DNA topoisomerase IV, B subunit [Rhodobacter capsulatus SB 1003] Length = 652 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A ++R+E + G + DNG G+ + Sbjct: 48 VAEILDNAMDEAVAGHANRIEVEVNADG--SVTVRDNGRGIPVD 89 >gi|83311975|ref|YP_422239.1| Signal transduction histidine kinase [Magnetospirillum magneticum AMB-1] gi|82946816|dbj|BAE51680.1| Signal transduction histidine kinase [Magnetospirillum magneticum AMB-1] Length = 560 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 8/50 (16%) Query: 30 LIENSL-----DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAV 72 L+EN+L DA ++E + G + DNG G+ Sbjct: 457 LLENALIYRKPDA-PPQIEIKATLEPKGLWLISVRDNGIGIEPAYFEKIF 505 >gi|150389387|ref|YP_001319436.1| hypothetical protein Amet_1598 [Alkaliphilus metalliredigens QYMF] gi|149949249|gb|ABR47777.1| hypothetical protein Amet_1598 [Alkaliphilus metalliredigens QYMF] Length = 543 Score = 45.8 bits (107), Expect = 0.021, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 20 IERPSIAIKELIENSLDAESSRVETVIAGG--GKSFFQITDNGFGMTSEEIP 69 I P I+E I NS DA++ + VI GK ++ D+G GM I Sbjct: 21 IVNPLEVIREGISNSHDADAKHISIVIYRNKSGKFVLEMQDDGKGMNFNNIQ 72 >gi|308190314|ref|YP_003923245.1| DNA topoisomerase (ATP-hydrolyzing) [Mycoplasma fermentans JER] gi|319777710|ref|YP_004137361.1| DNA gyrase subunit b [Mycoplasma fermentans M64] gi|307625056|gb|ADN69361.1| DNA topoisomerase (ATP-hydrolyzing) [Mycoplasma fermentans JER] gi|318038785|gb|ADV34984.1| DNA gyrase subunit B [Mycoplasma fermentans M64] Length = 640 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A +++VE I G + + DNG G+ Sbjct: 41 EIVDNSVDEAMAGFANKVEITITKDG--YIDVIDNGRGIP 78 >gi|238810228|dbj|BAH70018.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 644 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A +++VE I G + + DNG G+ Sbjct: 45 EIVDNSVDEAMAGFANKVEITITKDG--YIDVIDNGRGIP 82 >gi|149191879|ref|ZP_01870113.1| DNA gyrase subunit B [Vibrio shilonii AK1] gi|148834271|gb|EDL51274.1| DNA gyrase subunit B [Vibrio shilonii AK1] Length = 805 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + + I + ++D+G G+ EE A + H Sbjct: 42 EVVDNSIDEALAGHCNDIIVTIHED--NSVSVSDDGRGIPTEMHPEEQVSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S ++ Q GE + + + Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSKKVTLTIHRGGQIHTQTYHHGEPEAPLTVIG 158 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T E+R P+ F + + +++ +R ++ VS K K Sbjct: 159 DTDKTGTEIRF----WPSEETFT-NIEFHYDILAKRLRELSFLNSGVSIKL-IDKREEDK 212 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 M+ G + + + + +N G Y F N Sbjct: 213 MDHFMFEGGIQAFVEHLNTNKTPIIQKIFHFDNERDDGITVEVAMQWNDGYQENIYCFTN 272 Query: 256 GRTVQD 261 +D Sbjct: 273 NIPQRD 278 >gi|110003910|emb|CAK98250.1| dna gyrase subunit b protein [Spiroplasma citri] Length = 639 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 83/246 (33%), Gaps = 29/246 (11%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EIPMAVQ-RH 75 E+++NS+D A +++++ ++ + DNG G+ E + H Sbjct: 41 EIVDNSIDEVLANFANKIKIILNKD--ESITVIDNGRGIPIEIHPKTKVSTLETVFTILH 98 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K + I + G G + A+S L + R + G+ ++ ++ V Sbjct: 99 AGGKFDSNTYKI-SGGLHGVGASVVNALSKYLKVEVRKNNKKYVMEFHNGGQILTPIKEV 157 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFST----IK 190 T V +P F ++ + I + I+++ + + + Sbjct: 158 GSTSETGTTVTF----LPDEKIFKETTIFSFSTIQNRIKQLVFLNKGLEISLVDLREEDE 213 Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQF 250 F + ++ +++ IG + + N + G +N + Sbjct: 214 EKTVLYQFNNGIKDYVLELNKTIGTPLNDVFYVEGIEDNIVVEFGL----QYNDNYSENI 269 Query: 251 YVFING 256 + F N Sbjct: 270 FSFCNN 275 >gi|87200102|ref|YP_497359.1| DNA topoisomerase IV subunit B [Novosphingobium aromaticivorans DSM 12444] gi|87135783|gb|ABD26525.1| DNA topoisomerase IV subunit B [Novosphingobium aromaticivorans DSM 12444] Length = 666 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 6/46 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 E+++N++D A ++R+E ++ G + I+DNG G+ +E P Sbjct: 54 EVLDNAMDEAVAGHANRIEVLLEEG--NRLTISDNGRGIPVDEHPK 97 >gi|15826870|ref|NP_301133.1| DNA gyrase subunit B [Mycobacterium leprae TN] gi|221229348|ref|YP_002502764.1| DNA gyrase subunit B [Mycobacterium leprae Br4923] gi|13638292|sp|Q59533|GYRB_MYCLE RecName: Full=DNA gyrase subunit B gi|13092417|emb|CAC29513.1| putative DNA gyrase subunit B [Mycobacterium leprae] gi|219932455|emb|CAR70098.1| putative DNA gyrase subunit B [Mycobacterium leprae Br4923] Length = 678 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 13/53 (24%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E+++NS+D A +++V+ + G ++ DNG G+ V H T Sbjct: 47 EVVDNSVDEAMAGYATQVDVRLFDDG--SVEVADNGRGIP-------VAVHAT 90 >gi|7437456|pir||T10005 DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) - Mycobacterium leprae gi|1262356|emb|CAA94712.1| DNA gyrase B [Mycobacterium leprae] Length = 697 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 13/53 (24%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E+++NS+D A +++V+ + G ++ DNG G+ V H T Sbjct: 66 EVVDNSVDEAMAGYATQVDVRLFDDG--SVEVADNGRGIP-------VAVHAT 109 >gi|313112547|ref|ZP_07798211.1| DNA gyrase, B subunit [Faecalibacterium cf. prausnitzii KLE1255] gi|310625129|gb|EFQ08420.1| DNA gyrase, B subunit [Faecalibacterium cf. prausnitzii KLE1255] Length = 572 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A +E I Q+TDNG G+ + Sbjct: 53 VYEIVDNAIDEALAGYCDHIEVKILKDNI--IQVTDNGRGIPVD 94 >gi|300781943|ref|YP_003762234.1| DNA gyrase subunit B [Amycolatopsis mediterranei U32] gi|299791457|gb|ADJ41832.1| DNA gyrase subunit B [Amycolatopsis mediterranei U32] Length = 655 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 19/77 (24%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE----------EIPMA 71 ++E+++NS+D A +++VE + A GG ++ D+G G+ + E+ + Sbjct: 42 VQEVVDNSVDEAMAGHATKVEVTLLADGG---VRVVDDGRGIPVDMHPKEQKPTLEVVLT 98 Query: 72 VQRHCTSKISDDFSNIH 88 V H K D + Sbjct: 99 VL-HAGGKFDSDSYAVS 114 >gi|295103719|emb|CBL01263.1| DNA gyrase subunit B [Faecalibacterium prausnitzii SL3/3] Length = 664 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A +E I Q+TDNG G+ + Sbjct: 53 VYEIVDNAIDEALAGYCDHIEVKILKDNI--IQVTDNGRGIPVD 94 >gi|258513372|ref|YP_003189594.1| DNA gyrase, B subunit [Desulfotomaculum acetoxidans DSM 771] gi|257777077|gb|ACV60971.1| DNA gyrase, B subunit [Desulfotomaculum acetoxidans DSM 771] Length = 635 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + +TDNG G+ + Sbjct: 43 VYEVVDNSIDEAMAGYCDHIEVFINED--NSITVTDNGRGIPVD 84 >gi|225348707|gb|ACN87315.1| DNA gyrase beta-subunit [Amycolatopsis umgeniensis] Length = 468 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 19/77 (24%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE----------EIPMA 71 ++E+++NS+D A +++VE + A GG ++ D+G G+ + E+ + Sbjct: 7 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVDMHPKEKKPTLEVVLT 63 Query: 72 VQRHCTSKISDDFSNIH 88 V H K D + Sbjct: 64 VL-HAGGKFDSDSYAVS 79 >gi|194339119|gb|ACF49475.1| GyrB [Amycolatopsis vancoresmycina] Length = 447 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 19/77 (24%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE----------EIPMA 71 ++E+++NS+D A +++VE + A GG ++ D+G G+ + E+ + Sbjct: 4 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVDMHPKEQKPTLEVVLT 60 Query: 72 VQRHCTSKISDDFSNIH 88 V H K D + Sbjct: 61 VL-HAGGKFDSDSYAVS 76 >gi|194339103|gb|ACF49467.1| GyrB [Amycolatopsis rifamycinica] Length = 460 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 19/77 (24%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE----------EIPMA 71 ++E+++NS+D A +++VE + A GG ++ D+G G+ + E+ + Sbjct: 3 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVDMHPKEQKPTLEVVLT 59 Query: 72 VQRHCTSKISDDFSNIH 88 V H K D + Sbjct: 60 VL-HAGGKFDSDSYAVS 75 >gi|194339101|gb|ACF49466.1| GyrB [Amycolatopsis regifaucium] Length = 464 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 19/77 (24%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE----------EIPMA 71 ++E+++NS+D A +++VE + A GG ++ D+G G+ + E+ + Sbjct: 4 VQEVVDNSVDEAMAGHATKVEVTLLADGG---VRVVDDGRGIPVDMHPKEKKPTLEVVLT 60 Query: 72 VQRHCTSKISDDFSNIH 88 V H K D + Sbjct: 61 VL-HAGGKFDSDSYAVS 76 >gi|194339095|gb|ACF49463.1| GyrB [Amycolatopsis orientalis] Length = 463 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 19/77 (24%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE----------EIPMA 71 ++E+++NS+D A +++VE + A GG ++ D+G G+ + E+ + Sbjct: 2 VQEVVDNSVDEAMAGHATKVEVTLLADGG---VRVVDDGRGIPVDMHPKEKKPTLEVVLT 58 Query: 72 VQRHCTSKISDDFSNIH 88 V H K D + Sbjct: 59 VL-HAGGKFDSDSYAVS 74 >gi|194339085|gb|ACF49458.1| GyrB [Amycolatopsis mediterranei] Length = 447 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 19/77 (24%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE----------EIPMA 71 ++E+++NS+D A +++VE + A GG ++ D+G G+ + E+ + Sbjct: 4 VQEVVDNSVDEAMAGHATKVEVTLLADGG---VRVVDDGRGIPVDMHPKEQKPTLEVVLT 60 Query: 72 VQRHCTSKISDDFSNIH 88 V H K D + Sbjct: 61 VL-HAGGKFDSDSYAVS 76 >gi|194339083|gb|ACF49457.1| GyrB [Amycolatopsis lurida] Length = 460 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 19/77 (24%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE----------EIPMA 71 ++E+++NS+D A +++VE + A GG ++ D+G G+ + E+ + Sbjct: 3 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVDMHPKEMKPTLEVVLT 59 Query: 72 VQRHCTSKISDDFSNIH 88 V H K D + Sbjct: 60 VL-HAGGKFDSDSYAVS 75 >gi|194339081|gb|ACF49456.1| GyrB [Amycolatopsis keratiniphila subsp. nogabecina] Length = 466 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 19/77 (24%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE----------EIPMA 71 ++E+++NS+D A +++VE + A GG ++ D+G G+ + E+ + Sbjct: 7 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVDIHPKEQKPTLEVVLT 63 Query: 72 VQRHCTSKISDDFSNIH 88 V H K D + Sbjct: 64 VL-HAGGKFDSDSYAVS 79 >gi|194339075|gb|ACF49453.1| GyrB [Amycolatopsis japonica] Length = 450 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 19/77 (24%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE----------EIPMA 71 ++E+++NS+D A +++VE + A GG ++ D+G G+ + E+ + Sbjct: 6 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVDMHPKEMKPTLEVVLT 62 Query: 72 VQRHCTSKISDDFSNIH 88 V H K D + Sbjct: 63 VL-HAGGKFDSDSYAVS 78 >gi|194339065|gb|ACF49448.1| GyrB [Amycolatopsis decaplanina] Length = 456 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 19/77 (24%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE----------EIPMA 71 ++E+++NS+D A +++VE + A GG ++ D+G G+ + E+ + Sbjct: 2 VQEVVDNSVDEAMAGFATKVEVTLLADGG---VRVVDDGRGIPVDMHPKEQKPTLEVVLT 58 Query: 72 VQRHCTSKISDDFSNIH 88 V H K D + Sbjct: 59 VL-HAGGKFDSDSYAVS 74 >gi|194339059|gb|ACF49445.1| GyrB [Amycolatopsis azurea] Length = 446 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 19/77 (24%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE----------EIPMA 71 ++E+++NS+D A +++VE + A GG ++ D+G G+ + E+ + Sbjct: 2 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVDIHPKEQKPTLEVVLT 58 Query: 72 VQRHCTSKISDDFSNIH 88 V H K D + Sbjct: 59 VL-HAGGKFDSDSYAVS 74 >gi|160944260|ref|ZP_02091489.1| hypothetical protein FAEPRAM212_01769 [Faecalibacterium prausnitzii M21/2] gi|158444442|gb|EDP21446.1| hypothetical protein FAEPRAM212_01769 [Faecalibacterium prausnitzii M21/2] Length = 664 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A +E I Q+TDNG G+ + Sbjct: 53 VYEIVDNAIDEALAGYCDHIEVKILKDNI--IQVTDNGRGIPVD 94 >gi|153005239|ref|YP_001379564.1| histidine kinase [Anaeromyxobacter sp. Fw109-5] gi|152028812|gb|ABS26580.1| histidine kinase [Anaeromyxobacter sp. Fw109-5] Length = 418 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 1/57 (1%) Query: 22 RPSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 R + L++N+ +A + VE A G ++ D+G G+ + T Sbjct: 313 RLRQVLSNLLQNAAEAGAGCVEIRGAARDGNVLLEVRDDGRGIDPAVRARLFEPFAT 369 >gi|256397316|ref|YP_003118880.1| histidine kinase [Catenulispora acidiphila DSM 44928] gi|256363542|gb|ACU77039.1| histidine kinase [Catenulispora acidiphila DSM 44928] Length = 392 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 9/53 (16%) Query: 30 LIENSL-----DAESSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHC 76 L+EN++ D +RV + G +TD G G+ ++ +R Sbjct: 283 LVENAVNYSPDD---TRVAVTVKRTGDLVEISVTDQGIGIPERDLERIFERFY 332 >gi|229152978|ref|ZP_04281159.1| Sensor histidine kinase [Bacillus cereus m1550] gi|228630398|gb|EEK87046.1| Sensor histidine kinase [Bacillus cereus m1550] Length = 334 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 242 LIKNAIEAMSVGGTITIKVTVKDG--IIVQVKDEGCGIPKDKIPKLNEAFYTTK 293 >gi|189502463|ref|YP_001958180.1| hypothetical protein Aasi_1109 [Candidatus Amoebophilus asiaticus 5a2] gi|189497904|gb|ACE06451.1| hypothetical protein Aasi_1109 [Candidatus Amoebophilus asiaticus 5a2] Length = 651 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + ++ I + ++DNG G+ ++ Sbjct: 47 EVVDNSIDEALAGYCTTIKVQIHSD--NSITVSDNGRGIPTD 86 >gi|157692515|ref|YP_001486977.1| sensor histidine kinase [Bacillus pumilus SAFR-032] gi|157681273|gb|ABV62417.1| sensor histidine kinase [Bacillus pumilus SAFR-032] Length = 467 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 4/50 (8%) Query: 30 LIENSL---DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 LI N+L DA+ ++ + + I DNG G+ E+ R+ Sbjct: 371 LILNALVHNDAD-VKIIVQLEQKDHTHITIQDNGKGIEEAELEKVFDRYY 419 >gi|330888464|gb|EGH21125.1| sensor histidine kinase [Pseudomonas syringae pv. mori str. 301020] Length = 234 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAE----SSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA S R+E I + + DNG G+ E + Sbjct: 126 RLEQVLINLLRNALDAMRECPSRRLEVRIDTIDKQWRLSVKDNGTGIAEENLASIFDPFF 185 Query: 77 TSK 79 T+K Sbjct: 186 TTK 188 >gi|49473739|ref|YP_031781.1| two-component sensor histidine kinase [Bartonella quintana str. Toulouse] gi|49239242|emb|CAF25562.1| Two-component sensor histidine kinase [Bartonella quintana str. Toulouse] Length = 594 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 13/76 (17%) Query: 22 RPSIAIKELIENS---L--DAESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRH 75 R I LIEN+ + D ++ + + I DNG G+ SE I +R Sbjct: 478 RLGQVISNLIENARSFIPHDNG--KIYITMKSHASTLILTIEDNGPGIRSENIERIFERF 535 Query: 76 CTSKISDDFSNIHTFG 91 T + S+D TFG Sbjct: 536 YTDRPSED-----TFG 546 >gi|88798536|ref|ZP_01114120.1| DNA gyrase subunit B [Reinekea sp. MED297] gi|88778636|gb|EAR09827.1| DNA gyrase subunit B [Reinekea sp. MED297] Length = 804 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 37/251 (14%), Positives = 77/251 (30%), Gaps = 33/251 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A S + I + DNG G+ EE A + H Sbjct: 42 EVVDNSIDEALAGHCSEITVTIHPN--ESVSVEDNGRGIPTEIHEEEGRSAAEVILTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS---HLTLMS--RPPQNNTGAQIAISGEKISS 130 K D+ + + G G + + A+S LT+ + + + + + K+ Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGVSVVNALSAELKLTIRRGGKVHEQDYSHGVPVEPLKVVG 158 Query: 131 VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 T + F I + +++ +R ++ V+ + Sbjct: 159 DADTTGTKITFLPSSGTFANI----------KYSYDILAKRLRELSFLNSGVAIRLKDER 208 Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQF 250 + + G ++ + N V E G +N Sbjct: 209 TAQEDYFHY--EGGLKAFVTYLNRNKQTLNEVFHFSFEREEDGIGVEVALQWNDSYQENI 266 Query: 251 YVFINGRTVQD 261 + + N +D Sbjct: 267 FSYTNNIPQRD 277 >gi|304320371|ref|YP_003854014.1| sensor histidine kinase [Parvularcula bermudensis HTCC2503] gi|303299273|gb|ADM08872.1| sensor histidine kinase [Parvularcula bermudensis HTCC2503] Length = 585 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 7/62 (11%) Query: 23 PSIAIKELIENSL----DAESSRVETVIA---GGGKSFFQITDNGFGMTSEEIPMAVQRH 75 ++ L++N+L + + R+ V+ GG + + D G G+ E + +R Sbjct: 465 LGQVLRNLMDNALSFSPEGGAVRISLVVEAREGGQLAILSVEDEGPGIPEENLESIFERF 524 Query: 76 CT 77 T Sbjct: 525 YT 526 >gi|295398131|ref|ZP_06808180.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Aerococcus viridans ATCC 11563] gi|294973650|gb|EFG49428.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Aerococcus viridans ATCC 11563] Length = 689 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + ++ I + + D+G G+ + Sbjct: 96 EIVDNSIDEALAGFAGHIQVTIEKD--NSITVVDDGRGIPVD 135 >gi|254486692|ref|ZP_05099897.1| DNA topoisomerase IV, B subunit [Roseobacter sp. GAI101] gi|214043561|gb|EEB84199.1| DNA topoisomerase IV, B subunit [Roseobacter sp. GAI101] Length = 653 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+I+NS+D A ++ +E + G + DNG G+ ++ Sbjct: 49 VAEIIDNSMDEAVAGHATWIELELHENG--HVTVRDNGRGIPTD 90 >gi|194228180|ref|XP_001915527.1| PREDICTED: MORC family CW-type zinc finger 4 [Equus caballus] Length = 857 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 21 ERPSIAIKELIENSLDAE--SSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCT 77 RP A+ EL++N++D + + V + KS TD+G GMT ++ + T Sbjct: 14 TRP-SAVAELLDNAVDPDVSARTVFIDVEEVKNKSCLTFTDDGCGMTPHKLHRMLSFGFT 72 Query: 78 SK 79 K Sbjct: 73 DK 74 >gi|83942882|ref|ZP_00955342.1| DNA topoisomerase IV, B subunit [Sulfitobacter sp. EE-36] gi|83845890|gb|EAP83767.1| DNA topoisomerase IV, B subunit [Sulfitobacter sp. EE-36] Length = 653 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+I+NS+D A ++ +E + G + DNG G+ ++ Sbjct: 49 VAEIIDNSMDEAVAGHATWIELELHENG--HVTVRDNGRGIPTD 90 >gi|83954053|ref|ZP_00962773.1| DNA topoisomerase IV subunit B [Sulfitobacter sp. NAS-14.1] gi|83841090|gb|EAP80260.1| DNA topoisomerase IV subunit B [Sulfitobacter sp. NAS-14.1] Length = 308 Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+I+NS+D A ++ +E + G + DNG G+ ++ Sbjct: 49 VAEIIDNSMDEAVAGHATWIELELHENG--HVTVRDNGRGIPTD 90 >gi|319937318|ref|ZP_08011725.1| hypothetical protein HMPREF9488_02560 [Coprobacillus sp. 29_1] gi|319807684|gb|EFW04277.1| hypothetical protein HMPREF9488_02560 [Coprobacillus sp. 29_1] Length = 177 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 3/48 (6%) Query: 33 NSLDAESSRVETVIAG---GGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 NS+ A +S + I I DNG GM E + + T Sbjct: 14 NSIRAHASMIYIQIVDSVENNIIDISIKDNGHGMDKETVEKVIDPFYT 61 >gi|229099920|ref|ZP_04230843.1| DNA gyrase subunit B [Bacillus cereus Rock3-29] gi|229118983|ref|ZP_04248328.1| DNA gyrase subunit B [Bacillus cereus Rock1-3] gi|228664508|gb|EEL20004.1| DNA gyrase subunit B [Bacillus cereus Rock1-3] gi|228683535|gb|EEL37490.1| DNA gyrase subunit B [Bacillus cereus Rock3-29] gi|326937802|gb|AEA13698.1| DNA gyrase subunit B [Bacillus thuringiensis serovar chinensis CT-43] Length = 640 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 84 >gi|229164444|ref|ZP_04292372.1| DNA gyrase subunit B [Bacillus cereus R309803] gi|228619049|gb|EEK75947.1| DNA gyrase subunit B [Bacillus cereus R309803] Length = 640 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 84 >gi|190710611|gb|ACE95136.1| gyrase subunit B [Bacillus thuringiensis serovar morrisoni] Length = 627 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|190710609|gb|ACE95135.1| gyrase subunit B [Bacillus thuringiensis serovar morrisoni] Length = 627 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|190710601|gb|ACE95131.1| gyrase subunit B [Bacillus thuringiensis serovar neoleonensis] Length = 627 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|190710597|gb|ACE95129.1| gyrase subunit B [Bacillus thuringiensis serovar morrisoni] Length = 627 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|190710589|gb|ACE95125.1| gyrase subunit B [Bacillus thuringiensis serovar darmstadiensis] Length = 627 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|190710581|gb|ACE95121.1| gyrase subunit B [Bacillus thuringiensis serovar sotto] Length = 627 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|190710569|gb|ACE95115.1| gyrase subunit B [Bacillus thuringiensis serovar alesti] Length = 627 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|190710567|gb|ACE95114.1| gyrase subunit B [Bacillus thuringiensis serovar toumanoffi] Length = 627 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|190710553|gb|ACE95107.1| gyrase subunit B [Bacillus thuringiensis serovar kyushuensis] Length = 627 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|190710551|gb|ACE95106.1| gyrase subunit B [Bacillus thuringiensis serovar sotto] gi|190710565|gb|ACE95113.1| gyrase subunit B [Bacillus thuringiensis serovar sumiyoshiensis] gi|190710591|gb|ACE95126.1| gyrase subunit B [Bacillus thuringiensis serovar sotto] Length = 627 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|190710547|gb|ACE95104.1| gyrase subunit B [Bacillus thuringiensis serovar alesti] Length = 627 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|145577993|gb|ABP82715.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar alesti] Length = 632 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|145577981|gb|ABP82709.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar seoulensis] Length = 632 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|145578001|gb|ABP82719.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar shandongiensis] Length = 632 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|145577987|gb|ABP82712.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar wratislaviensis] Length = 632 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|145578015|gb|ABP82726.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar ostriniae] Length = 632 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|145578023|gb|ABP82730.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar fukuokaensis] Length = 632 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|145578017|gb|ABP82727.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar tohokuensis] Length = 632 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|145577983|gb|ABP82710.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar sotto] Length = 632 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|307352229|ref|YP_003893280.1| multi-sensor hybrid histidine kinase [Methanoplanus petrolearius DSM 11571] gi|307155462|gb|ADN34842.1| multi-sensor hybrid histidine kinase [Methanoplanus petrolearius DSM 11571] Length = 1048 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 23/81 (28%) Query: 13 QIAAGEIIERPSIAIKELIENSLDAESS--RVETVIAGGGKSF------------FQITD 58 QI ++IE L+ NS+ A + + G + D Sbjct: 786 QI--SQVIEN-------LVINSIQAMADGGNIYVQARNAGVISGKDGLEDGKYIVISVRD 836 Query: 59 NGFGMTSEEIPMAVQRHCTSK 79 +G G+ E + T+K Sbjct: 837 DGSGIPEEYREKIFDPYFTTK 857 >gi|301168536|emb|CBW28126.1| putative alkaline phosphatase synthesis sensor protein [Bacteriovorax marinus SJ] Length = 630 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 30 LIENSLD-AE-SSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHC 76 L+EN++ + S V + + I+DNG G+ E++ ++ Sbjct: 531 LVENAIKYSGEGSEVNVKTWDDEQWVYITISDNGVGIPPEDLEYVFEKFY 580 >gi|283850505|ref|ZP_06367793.1| histidine kinase [Desulfovibrio sp. FW1012B] gi|283574076|gb|EFC22048.1| histidine kinase [Desulfovibrio sp. FW1012B] Length = 836 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Query: 23 PSIAIKELIENSLDA---ESSRVETVIAGGGKS----FFQITDNGFGMTSEEIPMAVQRH 75 + L+ N+LDA ++ + AG G + ++ DNG G+ E+ P Sbjct: 722 LEQVLSNLLLNALDAVTPDAGEIVLE-AGAGPDDRTVYLRVADNGPGIAPEDAPRIFDPF 780 Query: 76 CTSK 79 T+K Sbjct: 781 FTTK 784 >gi|260891935|ref|YP_003238032.1| DNA gyrase, B subunit [Ammonifex degensii KC4] gi|260864076|gb|ACX51182.1| DNA gyrase, B subunit [Ammonifex degensii KC4] Length = 636 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E VI + + DNG G+ + Sbjct: 45 VYEVVDNSIDEALAGFCTEIEVVIKQD--NSVLVKDNGRGIPVD 86 >gi|257062759|ref|YP_003142431.1| DNA gyrase subunit B [Slackia heliotrinireducens DSM 20476] gi|256790412|gb|ACV21082.1| DNA gyrase subunit B [Slackia heliotrinireducens DSM 20476] Length = 648 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A ++++ +I + + DNG G+ E Sbjct: 43 VYEVVDNAVDEALAGYCTKIDVIIHED--NSITVIDNGRGIPVE 84 >gi|228942642|ref|ZP_04105174.1| DNA gyrase subunit B [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975572|ref|ZP_04136124.1| DNA gyrase subunit B [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982208|ref|ZP_04142497.1| DNA gyrase subunit B [Bacillus thuringiensis Bt407] gi|228777560|gb|EEM25838.1| DNA gyrase subunit B [Bacillus thuringiensis Bt407] gi|228784182|gb|EEM32209.1| DNA gyrase subunit B [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817068|gb|EEM63161.1| DNA gyrase subunit B [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 642 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 49 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 86 >gi|218895146|ref|YP_002443557.1| DNA gyrase, B subunit [Bacillus cereus G9842] gi|228905437|ref|ZP_04069392.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 4222] gi|228968646|ref|ZP_04129629.1| DNA gyrase subunit B [Bacillus thuringiensis serovar sotto str. T04001] gi|218542098|gb|ACK94492.1| DNA gyrase, B subunit [Bacillus cereus G9842] gi|228791075|gb|EEM38693.1| DNA gyrase subunit B [Bacillus thuringiensis serovar sotto str. T04001] gi|228854257|gb|EEM98960.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 4222] Length = 640 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 84 >gi|23978233|dbj|BAC21112.1| DNA gyrase B subunit [Anabaenopsis circularis] Length = 398 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ ++ Sbjct: 12 VYEVVDNSVDEALAGYCTHIEIEINADG--SVSVTDDGRGIPTD 53 >gi|308235537|ref|ZP_07666274.1| DNA gyrase subunit B [Gardnerella vaginalis ATCC 14018] gi|311114018|ref|YP_003985239.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Gardnerella vaginalis ATCC 14019] gi|310945512|gb|ADP38216.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Gardnerella vaginalis ATCC 14019] Length = 691 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 6/47 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +S +E I + ++ D+G G+ +E+P Sbjct: 66 VYEIVDNSVDEALAGYASHIEVTILPD--NAIKVVDDGRGIPVDEVP 110 >gi|167839125|ref|ZP_02465902.1| sensor histidine kinase [Burkholderia thailandensis MSMB43] Length = 459 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 6/52 (11%) Query: 30 LIENSL---DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A + RV+ + G Q+ DNG G+ + + +R Sbjct: 355 LVDNAIRYAGAGA-RVDVEARVDADGAPALQVRDNGPGIPAADRERVWERFY 405 >gi|297618880|ref|YP_003706985.1| DNA topoisomerase VI subunit B [Methanococcus voltae A3] gi|297377857|gb|ADI36012.1| DNA topoisomerase VI, B subunit [Methanococcus voltae A3] Length = 658 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 27/110 (24%) Query: 25 IAIKELIENSLDA--ESS---RVETVIAGGGKSF--FQITDNGFGMTSEEIPMAVQR-HC 76 I EL+ NS+DA E+ + I G + + DNG G+ + +P + Sbjct: 38 TIIHELVTNSMDACEEAEILPDINVTIERLGNEYYKLIVEDNGSGIPPKYVPKVFGKMLA 97 Query: 77 TSKISDDFSNIHTFGFRGEALPSIGAV-----SHLT------LMSRPPQN 115 SK+ I + G +G IGA S +T + + Sbjct: 98 GSKLH---RQIQSRGQQG-----IGAAGVLLFSQMTTGKPLKITTSTGDG 139 >gi|115381182|gb|ABI96240.1| DNA topoisomerase IV subunit B [Spiroplasma gladiatoris] Length = 552 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + VI G + DNG G+ Sbjct: 14 EIVDNSIDEALAGFCDEINVVIEKDG--SITVKDNGRGVP 51 >gi|148244667|ref|YP_001219361.1| DNA topoisomerase IV subunit B [Candidatus Vesicomyosocius okutanii HA] gi|146326494|dbj|BAF61637.1| topoisomerase IV subunit B [Candidatus Vesicomyosocius okutanii HA] Length = 626 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 35/200 (17%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM------ 70 E P+ +E+I+NS+D A +S++ V+ + + D+G GM + P Sbjct: 29 ECPNHLAQEVIDNSVDEAIAGFASKINVVLYKN--NSLSVEDDGRGMPVDIHPKEGKSGV 86 Query: 71 ---AVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEK 127 + H K S+D + G G + + A+S L + K Sbjct: 87 EVILTKLHAGGKFSNDLYQ-FSGGLHGVGISVVNALSTLVEI-----------WIKRDAK 134 Query: 128 ISSVRPVAMNPGTIVEVRDLF--FTIPARLNFLK------SEQVETNLITDVIRRMAIAY 179 + + T ++V + + F + + + + +R A+ Sbjct: 135 EHHITFSNGSKKTELKVTRKVSKYNTGTIVKFKPDARFFDNIKFSATKLHNNLRSKAVLC 194 Query: 180 PKVSFTFSTIKSNRYKMNFQ 199 P + F + + Sbjct: 195 PDLEINFYNEINEKTDKWIY 214 >gi|15643596|ref|NP_228642.1| DNA gyrase, subunit B [Thermotoga maritima MSB8] gi|6831559|sp|P77993|GYRB_THEMA RecName: Full=DNA gyrase subunit B; AltName: Full=Topoisomerase II subunit B gi|4981365|gb|AAD35915.1|AE001750_9 DNA gyrase, subunit B [Thermotoga maritima MSB8] Length = 636 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ----- 73 + E+++NS+D A + + G ++ DNG G+ EE A++ Sbjct: 38 VYEVVDNSVDEALAGYCDWIRVTLHEDG--SVEVEDNGRGIPVDIHPEEGRSALEVVFTV 95 Query: 74 RHCTSKISDDFSNIH 88 H K S D I Sbjct: 96 LHAGGKFSKDSYKIS 110 >gi|307331912|ref|ZP_07611008.1| DNA gyrase, B subunit [Streptomyces violaceusniger Tu 4113] gi|306882430|gb|EFN13520.1| DNA gyrase, B subunit [Streptomyces violaceusniger Tu 4113] Length = 676 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++E+++NS+D A + +E I A GG ++ DNG G+ Sbjct: 67 VQEVVDNSVDEAMAGHADSIEVTILADGG---VRVVDNGRGIP 106 >gi|293391260|ref|ZP_06635594.1| ATPase family protein [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951794|gb|EFE01913.1| ATPase family protein [Aggregatibacter actinomycetemcomitans D7S-1] Length = 622 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Query: 29 ELIENSLDAESSRVETVI--AGGGKSFFQITDNGFGMTS 65 E I N+LDA+++ + I S F+I DNG G+ Sbjct: 24 EAIANALDADATEITIDINYNNSEFSSFKIIDNGVGIDE 62 >gi|261252013|ref|ZP_05944587.1| hypothetical protein VIA_002036 [Vibrio orientalis CIP 102891] gi|260938886|gb|EEX94874.1| hypothetical protein VIA_002036 [Vibrio orientalis CIP 102891] Length = 609 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 7/64 (10%) Query: 22 RPSIAIKELIENSLDA--ESSR----VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + LI N++DA + S V A + + DNG G+ +E+IP Sbjct: 503 RLEQVLVNLISNAIDAVEQCSEPLIVVCVECADNEVT-IAVKDNGKGIIAEDIPHIFDPF 561 Query: 76 CTSK 79 T K Sbjct: 562 YTQK 565 >gi|281411537|ref|YP_003345616.1| DNA gyrase, B subunit [Thermotoga naphthophila RKU-10] gi|281372640|gb|ADA66202.1| DNA gyrase, B subunit [Thermotoga naphthophila RKU-10] Length = 636 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ----- 73 + E+++NS+D A + + G ++ DNG G+ EE A++ Sbjct: 38 VYEVVDNSVDEALAGYCDWIRVTLHEDG--SVEVEDNGRGIPVDIHPEEGRSALEVVFTV 95 Query: 74 RHCTSKISDDFSNIH 88 H K S D I Sbjct: 96 LHAGGKFSKDSYKIS 110 >gi|238755475|ref|ZP_04616815.1| DNA topoisomerase 4 subunit B [Yersinia ruckeri ATCC 29473] gi|238706316|gb|EEP98693.1| DNA topoisomerase 4 subunit B [Yersinia ruckeri ATCC 29473] Length = 631 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + R++ ++ ++ D+G GM EE I Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHARRIDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAI 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + R H K S+ + G G + + A+S + + R + Sbjct: 89 ELIFCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSRRVEVNVRRDGQVYSMAFENGDK 147 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--F 184 + +F S + + ++ +++ A+ P V F Sbjct: 148 VQDLQVIGTCGKRNTGTSVHFW----PDESFFDSPRFSVSRLSHLLKAKAVLCPGVEIVF 203 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 + + E ++ + Sbjct: 204 KDLLNNTEQRWCYADGLTDYLMEAVNGL 231 >gi|242280002|ref|YP_002992131.1| PAS/PAC sensor signal transduction histidine kinase [Desulfovibrio salexigens DSM 2638] gi|242122896|gb|ACS80592.1| PAS/PAC sensor signal transduction histidine kinase [Desulfovibrio salexigens DSM 2638] Length = 548 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 11/61 (18%) Query: 30 LIENSLDA-------ESS---RVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 L++NS+ A + R+ + G +I DNG GM+ E A++ T+ Sbjct: 443 LLKNSVQAILADQGRGADDIARITIRLRKEPGFIRLEIEDNGPGMSPETRKKALEPFFTT 502 Query: 79 K 79 K Sbjct: 503 K 503 >gi|212633643|ref|YP_002310168.1| DNA topoisomerase IV subunit B [Shewanella piezotolerans WP3] gi|212555127|gb|ACJ27581.1| DNA gyrase, B subunit [Shewanella piezotolerans WP3] Length = 631 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 74/200 (37%), Gaps = 37/200 (18%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A +SR++ ++ + ++TD+G GM EE + Sbjct: 34 RPNHLGQEVIDNSVDEALAGHASRIDVILHAD--NSLEVTDDGRGMPVDIHPEEGIPGVE 91 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQN--NTGAQ 120 + + + H K S+ + G G AL S + + R + + Sbjct: 92 LILTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSS-----RVEITVRRNAEVYDMAFE 145 Query: 121 IAISGEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAY 179 E + N GT V ++ S ++ +++ A+ Sbjct: 146 HGEKVEDLRVTGTCGRRNTGTRVHFW-------PDASYFDSGNFSITKLSYLLKAKAVLC 198 Query: 180 PKVSFTFSTIKSNRYKMNFQ 199 P + F ++N + F Sbjct: 199 PGLRIKFVNKQTNETQEWFY 218 >gi|254410831|ref|ZP_05024609.1| DNA gyrase, B subunit [Microcoleus chthonoplastes PCC 7420] gi|196182186|gb|EDX77172.1| DNA gyrase, B subunit [Microcoleus chthonoplastes PCC 7420] Length = 856 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E G +TD+G G+ ++ Sbjct: 39 VYEVVDNSIDEALAGYCTHIEVDFNSDG--SVSVTDDGRGIPTD 80 >gi|170287901|ref|YP_001738139.1| DNA gyrase, B subunit [Thermotoga sp. RQ2] gi|170175404|gb|ACB08456.1| DNA gyrase, B subunit [Thermotoga sp. RQ2] Length = 636 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ----- 73 + E+++NS+D A + + G ++ DNG G+ EE A++ Sbjct: 38 VYEVVDNSVDEVLAGYCDWIRVTLHEDG--SVEVEDNGRGIPVDIHPEEGRSALEVVFTV 95 Query: 74 RHCTSKISDDFSNIH 88 H K S D I Sbjct: 96 LHAGGKFSKDSYKIS 110 >gi|147779566|emb|CAN61157.1| hypothetical protein VITISV_001714 [Vitis vinifera] Length = 793 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 31/78 (39%) Query: 253 FINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPT 312 F R V+ + I YA T+P P + + + + VDVN+HP K + N Sbjct: 683 FSPDRLVECTALKRAIEIVYAATLPKASKPFIYMSIVLPSEHVDVNIHPTKREVSLLNQE 742 Query: 313 IIRNFIIQSIQKAINKKG 330 I I + + + Sbjct: 743 AIVEKIQSAFESKLRNSN 760 >gi|148269239|ref|YP_001243699.1| DNA gyrase, B subunit [Thermotoga petrophila RKU-1] gi|147734783|gb|ABQ46123.1| DNA gyrase subunit B [Thermotoga petrophila RKU-1] Length = 636 Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ----- 73 + E+++NS+D A + + G ++ DNG G+ EE A++ Sbjct: 38 VYEVVDNSVDEALAGYCDWIRVTLHEDG--SVEVEDNGRGIPVDIHPEEGRSALEVVFTV 95 Query: 74 RHCTSKISDDFSNIH 88 H K S D I Sbjct: 96 LHAGGKFSKDSYKIS 110 >gi|332968173|gb|EGK07254.1| DNA topoisomerase (ATP-hydrolyzing) ParE [Psychrobacter sp. 1501(2011)] Length = 629 Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A + ++ + G + D+G GM ++ Sbjct: 29 TRPNHLAQEVIDNSVDEALAGHAKTIKVQLHEDG--SLSVEDDGRGMPTD 76 >gi|312134087|ref|YP_004001425.1| DNA gyrase subunit B [Caldicellulosiruptor owensensis OL] gi|311774138|gb|ADQ03625.1| DNA gyrase, B subunit [Caldicellulosiruptor owensensis OL] Length = 637 Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A +E VI G + + D+G G+ + Sbjct: 45 VYEIVDNAIDEAMAGFCKNIEVVIHKG--NSVTVIDDGRGIPVD 86 >gi|228911333|ref|ZP_04075137.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 200] gi|228848351|gb|EEM93201.1| DNA gyrase subunit B [Bacillus thuringiensis IBL 200] Length = 642 Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 49 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 86 >gi|229015410|ref|ZP_04172416.1| DNA gyrase subunit B [Bacillus cereus AH1273] gi|229026934|ref|ZP_04183257.1| DNA gyrase subunit B [Bacillus cereus AH1272] gi|228734392|gb|EEL85063.1| DNA gyrase subunit B [Bacillus cereus AH1272] gi|228745889|gb|EEL95885.1| DNA gyrase subunit B [Bacillus cereus AH1273] Length = 640 Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 84 >gi|254465097|ref|ZP_05078508.1| periplasmic sensor signal transduction histidine kinase [Rhodobacterales bacterium Y4I] gi|206686005|gb|EDZ46487.1| periplasmic sensor signal transduction histidine kinase [Rhodobacterales bacterium Y4I] Length = 590 Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 10/64 (15%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N+LDA ++ VE ++A G + + DNG G+ ++ + Sbjct: 480 RLEQVMVNLLRNALDA--TKSVADPEVEILLAAGETATLSVRDNGVGI--KDFDNLFEPF 535 Query: 76 CTSK 79 T+K Sbjct: 536 YTTK 539 >gi|1622792|gb|AAC44498.1| DNA topoisomerase II subunit B [Thermotoga maritima MSB8] Length = 636 Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ----- 73 + E+++NS+D A + + G ++ DNG G+ EE A++ Sbjct: 38 VYEVVDNSVDEALAGYCDWIRVTLHEDG--SVEVEDNGRGIPVDIHPEEGRSALEVVFTV 95 Query: 74 RHCTSKISDDFSNIH 88 H K S D I Sbjct: 96 LHAGGKFSKDSYKIS 110 >gi|56961788|ref|YP_173510.1| DNA gyrase subunit B [Bacillus clausii KSM-K16] gi|56908022|dbj|BAD62549.1| DNA gyrase subunit B [Bacillus clausii KSM-K16] Length = 641 Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ I G + + DNG G+ Sbjct: 46 EIVDNSIDEAMAGFCDEIKVTIEEG--NALTVEDNGRGIP 83 >gi|88812692|ref|ZP_01127939.1| DNA topoisomerase IV, B subunit [Nitrococcus mobilis Nb-231] gi|88790108|gb|EAR21228.1| DNA topoisomerase IV, B subunit [Nitrococcus mobilis Nb-231] Length = 630 Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 67/187 (35%), Gaps = 33/187 (17%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+N +D A + R+E V+ G ++DNG GM EE + Sbjct: 30 TRPNHLAREVIDNGVDEALAGFADRIEVVLHYDG--SLSVSDNGRGMPVDLHPEEGLPGV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-------HLTLMSRPPQNNTGAQ 120 + + R H K S H++ F G L +G VS L + R + Sbjct: 88 ELILSRLHAGGKFSQ-----HSYQFSG-GLHGVG-VSVVNALSRRLEVTIRRDGQQ--WR 138 Query: 121 IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 + + S + VE P + S + + +R A+ P Sbjct: 139 MHFVEGEKCSELELIG-ALNKVETGTTLRFWPDAR-YFDSPRFSVPRLQYALRAKAVLCP 196 Query: 181 KVSFTFS 187 + F Sbjct: 197 GLRVRFY 203 >gi|75761791|ref|ZP_00741726.1| DNA gyrase subunit B [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74490724|gb|EAO54005.1| DNA gyrase subunit B [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 645 Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 52 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 89 >gi|242279327|ref|YP_002991456.1| histidine kinase [Desulfovibrio salexigens DSM 2638] gi|242122221|gb|ACS79917.1| histidine kinase [Desulfovibrio salexigens DSM 2638] Length = 557 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 9/63 (14%) Query: 30 LIENSLDA-----ESSRVETVI----AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKI 80 L+ N++ A S E VI G + ++ DNG G+ +++ ++K Sbjct: 455 LLNNAIHAVVDEHGSENGEIVIAAGQDQNGNALIKVCDNGVGIHEKDMERIFLPFYSTKK 514 Query: 81 SDD 83 + D Sbjct: 515 NSD 517 >gi|240171858|ref|ZP_04750517.1| heat shock protein 90 [Mycobacterium kansasii ATCC 12478] Length = 647 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 47/161 (29%) Query: 25 IAIKELIENSLDA--------------ESSR----VETVIAGGGKSFFQITDNGFGMTSE 66 ++ELI N+ DA + ++ + G ++ + DNG GMT + Sbjct: 31 SFLRELISNASDALDKLRLEALRNKELNADTSDLHIQLEVDKGARTL-TVRDNGIGMTRD 89 Query: 67 ---EIPMAVQRHCTSKISDDFSNIHTFGFRGEALPS---IGA----------VS-HLTLM 109 ++ + + T+++ +AL S IG V+ + L+ Sbjct: 90 EVVDLIGTLAKSGTAELRQQLREAK------DALASEELIGQFGIGFYSSFMVADKVELL 143 Query: 110 SRPPQNNTGAQIAIS-----GEKISSVRPVAMNPGTIVEVR 145 +R + + S + GT V + Sbjct: 144 TRKAGESEATRWESSGDGTYTIESVDSSTAGATQGTSVTLH 184 >gi|255038730|ref|YP_003089351.1| DNA gyrase, B subunit [Dyadobacter fermentans DSM 18053] gi|254951486|gb|ACT96186.1| DNA gyrase, B subunit [Dyadobacter fermentans DSM 18053] Length = 651 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 18/40 (45%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + + + DNG G+ Sbjct: 48 EVVDNSIDEAMAGYCDTINVTVEKN--NSITVKDNGRGIP 85 >gi|205371907|ref|ZP_03224727.1| DNA gyrase subunit B [Bacillus coahuilensis m4-4] Length = 160 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + VI + +TDNG G+ Sbjct: 49 EIVDNSIDEALAGHCDEINVVIEKD--NSITVTDNGRGIP 86 >gi|254441649|ref|ZP_05055142.1| DNA topoisomerase IV, B subunit [Octadecabacter antarcticus 307] gi|198251727|gb|EDY76042.1| DNA topoisomerase IV, B subunit [Octadecabacter antarcticus 307] Length = 652 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A ++ +E + G + + DNG G+ Sbjct: 48 VAEIVDNSMDEAVAGHATWIEVELHANGHA--TVRDNGRGIP 87 >gi|187777362|ref|ZP_02993835.1| hypothetical protein CLOSPO_00918 [Clostridium sporogenes ATCC 15579] gi|187774290|gb|EDU38092.1| hypothetical protein CLOSPO_00918 [Clostridium sporogenes ATCC 15579] Length = 637 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + +E I + + D+G GM Sbjct: 43 VYEIVDNSIDEALAGFCTHIEVFIHKD--NSITVVDDGRGMP 82 >gi|168183732|ref|ZP_02618396.1| DNA gyrase, B subunit [Clostridium botulinum Bf] gi|237793326|ref|YP_002860878.1| DNA gyrase subunit B [Clostridium botulinum Ba4 str. 657] gi|182673147|gb|EDT85108.1| DNA gyrase, B subunit [Clostridium botulinum Bf] gi|229263377|gb|ACQ54410.1| DNA gyrase, B subunit [Clostridium botulinum Ba4 str. 657] Length = 637 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + +E I + + D+G GM Sbjct: 43 VYEIVDNSIDEALAGFCTHIEVFIHKD--NSITVVDDGRGMP 82 >gi|126737542|ref|ZP_01753272.1| C4-dicarboxylate transport sensor protein DctB, putative [Roseobacter sp. SK209-2-6] gi|126720935|gb|EBA17639.1| C4-dicarboxylate transport sensor protein DctB, putative [Roseobacter sp. SK209-2-6] Length = 559 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 10/64 (15%) Query: 22 RPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + L+ N+LDA ++ VE ++A G + + DNG G+ E+ Sbjct: 449 RLEQVMVNLLRNALDA--TKSVDDPEVEILLAAGETATLTVRDNGIGI--EDFGSLFDPF 504 Query: 76 CTSK 79 T+K Sbjct: 505 YTTK 508 >gi|78356727|ref|YP_388176.1| PAS/PAC sensor signal transduction histidine kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219132|gb|ABB38481.1| PAS/PAC sensor signal transduction histidine kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 581 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Query: 25 IAIKELIENSLDA------ESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 A+ L+ NSLDA + +V+ +A G F + D GMT E+ A + Sbjct: 462 QAVLNLVLNSLDALKETDGGARQVDVASGLAKDGVWLF-VRDTANGMTKEQAEQAFEPFY 520 Query: 77 TSK 79 T+K Sbjct: 521 TTK 523 >gi|14520810|ref|NP_126285.1| DNA topoisomerase VI subunit B [Pyrococcus abyssi GE5] gi|13124623|sp|Q9V135|TOP6B_PYRAB RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|5458026|emb|CAB49516.1| Top6B DNA topoisomerase VI, subunit B [Pyrococcus abyssi GE5] Length = 564 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 7/60 (11%) Query: 20 IERPSIAIKELIENSLDA--ESSR---VETVIAGGGKS--FFQITDNGFGMTSEEIPMAV 72 I + I E + NSLDA E+ + I GK + DNG G+ E IP Sbjct: 33 IRSLTTIIHEAVTNSLDACEEAGILPYIRVEIEELGKEHYKVIVEDNGPGIPEEYIPHVF 92 >gi|329944735|ref|ZP_08292814.1| DNA gyrase, B subunit [Actinomyces sp. oral taxon 170 str. F0386] gi|328529871|gb|EGF56761.1| DNA gyrase, B subunit [Actinomyces sp. oral taxon 170 str. F0386] Length = 675 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +E I A GG +++DNG G+ +E P Sbjct: 46 VYEVVDNSVDEALAGYCDHIEVTILADGG---VRVSDNGRGIPVDEHP 90 >gi|325066318|ref|ZP_08124991.1| DNA gyrase subunit B [Actinomyces oris K20] Length = 675 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +E I A GG +++DNG G+ +E P Sbjct: 46 VYEVVDNSVDEALAGYCDHIEVTILADGG---VRVSDNGRGIPVDEHP 90 >gi|320533167|ref|ZP_08033889.1| DNA gyrase, B subunit [Actinomyces sp. oral taxon 171 str. F0337] gi|320134627|gb|EFW26853.1| DNA gyrase, B subunit [Actinomyces sp. oral taxon 171 str. F0337] Length = 675 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +E I A GG +++DNG G+ +E P Sbjct: 46 VYEVVDNSVDEALAGYCDHIEVTILADGG---VRVSDNGRGIPVDEHP 90 >gi|326772839|ref|ZP_08232123.1| DNA gyrase, B subunit [Actinomyces viscosus C505] gi|326637471|gb|EGE38373.1| DNA gyrase, B subunit [Actinomyces viscosus C505] Length = 675 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 8/48 (16%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 + E+++NS+D A +E I A GG +++DNG G+ +E P Sbjct: 46 VYEVVDNSVDEALAGYCDHIEVTILADGG---VRVSDNGRGIPVDEHP 90 >gi|218264667|ref|ZP_03478430.1| hypothetical protein PRABACTJOHN_04139 [Parabacteroides johnsonii DSM 18315] gi|218221854|gb|EEC94504.1| hypothetical protein PRABACTJOHN_04139 [Parabacteroides johnsonii DSM 18315] Length = 651 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A ++V+ VI + +TD+G G+ + Sbjct: 46 VYEVVDNSIDEALAGFCTQVDVVINED--NSISVTDDGRGIPVD 87 >gi|170756292|ref|YP_001779632.1| DNA gyrase subunit B [Clostridium botulinum B1 str. Okra] gi|169121504|gb|ACA45340.1| DNA gyrase, B subunit [Clostridium botulinum B1 str. Okra] Length = 637 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + +E I + + D+G GM Sbjct: 43 VYEIVDNSIDEALAGFCTHIEVFIHKD--NSITVVDDGRGMP 82 >gi|154491922|ref|ZP_02031548.1| hypothetical protein PARMER_01552 [Parabacteroides merdae ATCC 43184] gi|154088163|gb|EDN87208.1| hypothetical protein PARMER_01552 [Parabacteroides merdae ATCC 43184] Length = 651 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A ++V+ VI + +TD+G G+ + Sbjct: 46 VYEVVDNSIDEALAGFCTQVDVVINED--NSISVTDDGRGIPVD 87 >gi|153939432|ref|YP_001389375.1| DNA gyrase subunit B [Clostridium botulinum F str. Langeland] gi|152935328|gb|ABS40826.1| DNA gyrase, B subunit [Clostridium botulinum F str. Langeland] gi|295317482|gb|ADF97859.1| DNA gyrase, B subunit [Clostridium botulinum F str. 230613] Length = 637 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + +E I + + D+G GM Sbjct: 43 VYEIVDNSIDEALAGFCTHIEVFIHKD--NSITVVDDGRGMP 82 >gi|148378017|ref|YP_001252558.1| DNA gyrase, B subunit [Clostridium botulinum A str. ATCC 3502] gi|153931278|ref|YP_001382416.1| DNA gyrase subunit B [Clostridium botulinum A str. ATCC 19397] gi|153936801|ref|YP_001385968.1| DNA gyrase subunit B [Clostridium botulinum A str. Hall] gi|148287501|emb|CAL81560.1| DNA gyrase subunit B [Clostridium botulinum A str. ATCC 3502] gi|152927322|gb|ABS32822.1| DNA gyrase, B subunit [Clostridium botulinum A str. ATCC 19397] gi|152932715|gb|ABS38214.1| DNA gyrase, B subunit [Clostridium botulinum A str. Hall] gi|322804284|emb|CBZ01834.1| DNA gyrase subunit B [Clostridium botulinum H04402 065] Length = 637 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + +E I + + D+G GM Sbjct: 43 VYEIVDNSIDEALAGFCTHIEVFIHKD--NSITVVDDGRGMP 82 >gi|19909679|dbj|BAB87035.1| DNA gyrase subunit B [Thermotoga sp. KU10] Length = 446 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 15/73 (20%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + + G ++ DNG G+ EE A++ H Sbjct: 1 EVVDNSVDEALAGYCDWIRVTLHEDG--SVEVEDNGRGIPVDIHPEEGRSALEVVFTVLH 58 Query: 76 CTSKISDDFSNIH 88 K S D I Sbjct: 59 AGGKFSKDSYKIS 71 >gi|19909675|dbj|BAB87033.1| DNA gyrase subunit B [Thermotoga sp. KU1] Length = 459 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 15/73 (20%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + + G ++ DNG G+ EE A++ H Sbjct: 2 EVVDNSVDEALAGYCDWIRVTLHEDG--SVEVEDNGRGIPVDIHPEEGRSALEVVFTVLH 59 Query: 76 CTSKISDDFSNIH 88 K S D I Sbjct: 60 AGGKFSKDSYKIS 72 >gi|19909681|dbj|BAB87036.1| DNA gyrase subunit B [Thermotoga sp. KU11] Length = 444 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 15/73 (20%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + + G ++ DNG G+ EE A++ H Sbjct: 1 EVVDNSVDEALAGYCDWIRVTLHEDG--SVEVEDNGRGIPVDIHPEEGRSALEVVFTVLH 58 Query: 76 CTSKISDDFSNIH 88 K S D I Sbjct: 59 AGGKFSKDSYKIS 71 >gi|329923566|ref|ZP_08279028.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Paenibacillus sp. HGF5] gi|328941209|gb|EGG37507.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Paenibacillus sp. HGF5] Length = 581 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 12/56 (21%) Query: 30 LIENSL-----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAV-----QRH 75 L+ENSL D R+E V+ + +I DNG G++ E+I + +RH Sbjct: 478 LVENSLYHGLDDNG--RIEVVVRKNDRLEIEIRDNGGGISEEKIEALLEQEQTERH 531 >gi|329954160|ref|ZP_08295255.1| DNA gyrase, B subunit [Bacteroides clarus YIT 12056] gi|328528137|gb|EGF55117.1| DNA gyrase, B subunit [Bacteroides clarus YIT 12056] Length = 653 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEVVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|329964535|ref|ZP_08301589.1| DNA gyrase, B subunit [Bacteroides fluxus YIT 12057] gi|328524935|gb|EGF51987.1| DNA gyrase, B subunit [Bacteroides fluxus YIT 12057] Length = 657 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEVVDNSIDEAMAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|323705242|ref|ZP_08116817.1| integral membrane sensor signal transduction histidine kinase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535144|gb|EGB24920.1| integral membrane sensor signal transduction histidine kinase [Thermoanaerobacterium xylanolyticum LX-11] Length = 453 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Query: 41 RVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 ++ + G + ++DNG G+ E++P +R S Sbjct: 366 NIKVKLYNEGQFAVITVSDNGIGIPKEDLPFIYERFYRS 404 >gi|319900374|ref|YP_004160102.1| DNA gyrase subunit B [Bacteroides helcogenes P 36-108] gi|319415405|gb|ADV42516.1| DNA gyrase subunit B [Bacteroides helcogenes P 36-108] Length = 657 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEVVDNSIDEAMAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|317478438|ref|ZP_07937599.1| DNA gyrase, subunit B [Bacteroides sp. 4_1_36] gi|316905397|gb|EFV27190.1| DNA gyrase, subunit B [Bacteroides sp. 4_1_36] Length = 653 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEVVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|311337327|gb|ADP89913.1| DNA gyrase subunit B [Amycolatopsis ultiminotia] Length = 470 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A +++VE + A GG ++ D+G G+ + Sbjct: 8 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVD 49 >gi|311337323|gb|ADP89911.1| DNA gyrase subunit B [Amycolatopsis sp. SE(8)3] Length = 463 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A +++VE + A GG ++ D+G G+ + Sbjct: 2 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVD 43 >gi|311337321|gb|ADP89910.1| DNA gyrase subunit B [Amycolatopsis sp. S3.6] Length = 455 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A +++VE + A GG ++ D+G G+ + Sbjct: 4 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVD 45 >gi|311337319|gb|ADP89909.1| DNA gyrase subunit B [Amycolatopsis sp. S1.3] Length = 461 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A +++VE + A GG ++ D+G G+ + Sbjct: 1 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVD 42 >gi|311032261|ref|ZP_07710351.1| DNA gyrase subunit B [Bacillus sp. m3-13] Length = 636 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A S + ++ + + DNG G+ Sbjct: 42 EIVDNSIDEALAGYCSEINVIVEKD--NSITVKDNGRGIP 79 >gi|257838320|gb|ACV71150.1| gyrase B [Bacteroides vulgatus] Length = 457 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 2 VYEVVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 43 >gi|257838316|gb|ACV71148.1| gyrase B [Bacteroides sartorii] Length = 457 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 2 VYEVVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 43 >gi|302531361|ref|ZP_07283703.1| DNA gyrase, B subunit [Streptomyces sp. AA4] gi|302440256|gb|EFL12072.1| DNA gyrase, B subunit [Streptomyces sp. AA4] Length = 655 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A +++VE + A GG ++ D+G G+ + Sbjct: 42 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVD 83 >gi|224536623|ref|ZP_03677162.1| hypothetical protein BACCELL_01499 [Bacteroides cellulosilyticus DSM 14838] gi|224521714|gb|EEF90819.1| hypothetical protein BACCELL_01499 [Bacteroides cellulosilyticus DSM 14838] Length = 653 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEVVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|218131840|ref|ZP_03460644.1| hypothetical protein BACEGG_03461 [Bacteroides eggerthii DSM 20697] gi|317474545|ref|ZP_07933819.1| DNA gyrase, subunit B [Bacteroides eggerthii 1_2_48FAA] gi|217986143|gb|EEC52482.1| hypothetical protein BACEGG_03461 [Bacteroides eggerthii DSM 20697] gi|316909226|gb|EFV30906.1| DNA gyrase, subunit B [Bacteroides eggerthii 1_2_48FAA] Length = 653 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEVVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|212692798|ref|ZP_03300926.1| hypothetical protein BACDOR_02296 [Bacteroides dorei DSM 17855] gi|237709487|ref|ZP_04539968.1| DNA gyrase B subunit [Bacteroides sp. 9_1_42FAA] gi|237724917|ref|ZP_04555398.1| DNA gyrase B subunit [Bacteroides sp. D4] gi|265754693|ref|ZP_06089745.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_33FAA] gi|212664587|gb|EEB25159.1| hypothetical protein BACDOR_02296 [Bacteroides dorei DSM 17855] gi|229436655|gb|EEO46732.1| DNA gyrase B subunit [Bacteroides dorei 5_1_36/D4] gi|229456543|gb|EEO62264.1| DNA gyrase B subunit [Bacteroides sp. 9_1_42FAA] gi|263234807|gb|EEZ20375.1| DNA gyrase, B subunit [Bacteroides sp. 3_1_33FAA] Length = 654 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEVVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|212716669|ref|ZP_03324797.1| hypothetical protein BIFCAT_01602 [Bifidobacterium catenulatum DSM 16992] gi|212660373|gb|EEB20948.1| hypothetical protein BIFCAT_01602 [Bifidobacterium catenulatum DSM 16992] Length = 448 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 25 IAIKELIENSLDAES--SRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHC 76 A+K L+EN+++ + V + G GK ++ D G G+ + +R Sbjct: 319 TAVKNLVENAINYSPEHTTVAVGVGSGDGKVSIRVVDQGIGIPESSLDRIFERFY 373 >gi|194339111|gb|ACF49471.1| GyrB [Amycolatopsis sulphurea] Length = 464 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A +++VE + A GG ++ D+G G+ + Sbjct: 3 VQEVVDNSVDEAMAGFATKVEVTLLADGG---VRVVDDGRGIPVD 44 >gi|194339105|gb|ACF49468.1| GyrB [Amycolatopsis rubida] Length = 450 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A +++VE + A GG ++ D+G G+ + Sbjct: 4 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVD 45 >gi|194339093|gb|ACF49462.1| GyrB [Amycolatopsis niigatensis] Length = 448 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A +++VE + A GG ++ D+G G+ + Sbjct: 4 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVD 45 >gi|194339077|gb|ACF49454.1| GyrB [Amycolatopsis jejuensis] Length = 436 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A +++VE + A GG ++ D+G G+ + Sbjct: 2 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVD 43 >gi|194339073|gb|ACF49452.1| GyrB [Amycolatopsis halotolerans] Length = 466 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A +++VE + A GG ++ D+G G+ + Sbjct: 5 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVD 46 >gi|194339067|gb|ACF49449.1| GyrB [Amycolatopsis echigonensis] Length = 449 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A +++VE + A GG ++ D+G G+ + Sbjct: 7 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVD 48 >gi|194339055|gb|ACF49443.1| GyrB [Amycolatopsis albidoflavus] Length = 461 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 ++E+++NS+D A +++VE + A GG ++ D+G G+ + Sbjct: 4 VQEVVDNSVDEAMAGYATKVEVTLLADGG---VRVVDDGRGIPVD 45 >gi|189464548|ref|ZP_03013333.1| hypothetical protein BACINT_00891 [Bacteroides intestinalis DSM 17393] gi|189438338|gb|EDV07323.1| hypothetical protein BACINT_00891 [Bacteroides intestinalis DSM 17393] Length = 653 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEVVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|209544317|ref|YP_002276546.1| DNA topoisomerase IV subunit B [Gluconacetobacter diazotrophicus PAl 5] gi|209531994|gb|ACI51931.1| DNA topoisomerase IV, B subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 678 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N++D A ++ ++ + G + I DNG G+ + Sbjct: 72 EILDNAMDEAVAGHATTIDVTLEAG--DWLTIRDNGRGIPVD 111 >gi|167764147|ref|ZP_02436274.1| hypothetical protein BACSTE_02530 [Bacteroides stercoris ATCC 43183] gi|167698263|gb|EDS14842.1| hypothetical protein BACSTE_02530 [Bacteroides stercoris ATCC 43183] Length = 653 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEVVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|162147271|ref|YP_001601732.1| DNA topoisomerase IV subunit B [Gluconacetobacter diazotrophicus PAl 5] gi|161785848|emb|CAP55419.1| putative DNA gyrase subunit B [Gluconacetobacter diazotrophicus PAl 5] Length = 678 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N++D A ++ ++ + G + I DNG G+ + Sbjct: 72 EILDNAMDEAVAGHATTIDVTLEAG--DWLTIRDNGRGIPVD 111 >gi|160891431|ref|ZP_02072434.1| hypothetical protein BACUNI_03882 [Bacteroides uniformis ATCC 8492] gi|270295441|ref|ZP_06201642.1| DNA gyrase, B subunit [Bacteroides sp. D20] gi|156858838|gb|EDO52269.1| hypothetical protein BACUNI_03882 [Bacteroides uniformis ATCC 8492] gi|270274688|gb|EFA20549.1| DNA gyrase, B subunit [Bacteroides sp. D20] Length = 653 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEVVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|150003955|ref|YP_001298699.1| DNA gyrase B subunit [Bacteroides vulgatus ATCC 8482] gi|254880798|ref|ZP_05253508.1| DNA gyrase B subunit [Bacteroides sp. 4_3_47FAA] gi|294775119|ref|ZP_06740648.1| DNA gyrase, B subunit [Bacteroides vulgatus PC510] gi|319639808|ref|ZP_07994538.1| B subunit [Bacteroides sp. 3_1_40A] gi|149932379|gb|ABR39077.1| DNA gyrase B subunit [Bacteroides vulgatus ATCC 8482] gi|254833591|gb|EET13900.1| DNA gyrase B subunit [Bacteroides sp. 4_3_47FAA] gi|294451163|gb|EFG19634.1| DNA gyrase, B subunit [Bacteroides vulgatus PC510] gi|317388625|gb|EFV69474.1| B subunit [Bacteroides sp. 3_1_40A] Length = 654 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I + + DNG G+ + Sbjct: 47 VYEVVDNSIDEALAGYCDHIEVTINED--NSITVQDNGRGIPVD 88 >gi|89092022|ref|ZP_01164977.1| DNA topoisomerase IV subunit B [Oceanospirillum sp. MED92] gi|89083757|gb|EAR62974.1| DNA topoisomerase IV subunit B [Oceanospirillum sp. MED92] Length = 630 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 17/77 (22%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE---------- 66 +RP+ +E+I+NS+D A + +++ V+ +TD+G GM + Sbjct: 30 DRPNHLAQEVIDNSVDEALAGHAKQIDVVLNKD--QSLSVTDDGRGMPVDIHPEQGVSGV 87 Query: 67 EIPMAVQRHCTSKISDD 83 E+ + + H K ++D Sbjct: 88 ELIL-CKLHAGGKFNND 103 >gi|145577999|gb|ABP82718.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar roskildiensis] Length = 632 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 77 >gi|119899482|ref|YP_934695.1| putative two component sensor histidine kinase [Azoarcus sp. BH72] gi|119671895|emb|CAL95809.1| putative two component sensor histidine kinase [Azoarcus sp. BH72] Length = 692 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Query: 21 ERPSIAIKELIENSLDA----ESSRVETVIAGGGKSFFQITDNGFGMTSE 66 ER + L++N++DA ++ GK I DNG GM ++ Sbjct: 572 ERLERVLGHLVQNAVDAMPDGGKVAIQIHRPRPGKVAVSIVDNGCGMPAD 621 >gi|70704840|gb|AAZ06862.1| DNA gyrase subunit B [Acholeplasma parvum] gi|70704870|gb|AAZ06863.1| DNA gyrase subunit B [Acholeplasma parvum] Length = 536 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + I ++TDNG G+ Sbjct: 12 EIVDNSIDEALAGYADTITLEILKDNI--IRVTDNGRGIP 49 >gi|121998762|ref|YP_001003549.1| DNA topoisomerase IV subunit B [Halorhodospira halophila SL1] gi|121590167|gb|ABM62747.1| DNA topoisomerase IV subunit B [Halorhodospira halophila SL1] Length = 636 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 6/49 (12%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP +E+I+NS+D A + R+E + G +++D+G GM + Sbjct: 35 RPDHLAQEVIDNSVDEAVAGHARRIEVTVHADG--SLEVSDDGRGMPVD 81 >gi|332665545|ref|YP_004448333.1| ATP-binding domain-containing protein [Haliscomenobacter hydrossis DSM 1100] gi|332334359|gb|AEE51460.1| ATP-binding region ATPase domain protein [Haliscomenobacter hydrossis DSM 1100] Length = 622 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 25/89 (28%) Query: 27 IKELIENSLDA-----------ESS------RVETVIAGGGKSFFQITDNGFGMTSEEIP 69 ++EL+ N++DA E+ ++E +I K+ I DNG GMT EE+ Sbjct: 29 LRELVSNAVDASNKLKALSRRGEAKGELGDLKIEILIDKDAKT-ITIRDNGIGMTEEEVK 87 Query: 70 MAVQRHCTS-------KISDDFSNIHTFG 91 + + S K D+ + I FG Sbjct: 88 KYLNQVAFSSAQEFLEKYKDETNIIGNFG 116 >gi|299136177|ref|ZP_07029361.1| DNA gyrase, B subunit [Acidobacterium sp. MP5ACTX8] gi|298602301|gb|EFI58455.1| DNA gyrase, B subunit [Acidobacterium sp. MP5ACTX8] Length = 880 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 24/45 (53%), Gaps = 6/45 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEE 67 + E+++NS+D A ++R++ I + + D+G G+ + Sbjct: 56 VYEVVDNSVDEALAGHATRIDVTIHVD--NSITVVDDGRGIPVDN 98 >gi|294663738|ref|ZP_06729289.1| DNA topoisomerase IV subunit B [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292606396|gb|EFF49590.1| DNA topoisomerase IV subunit B [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 629 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + +V+ + G +++D+G GM EE + Sbjct: 31 RPNHLAQEVIDNSVDEALAGHAKQVDVTLYKDG--SCEVSDDGRGMPVDIHPEEKIPGVE 88 Query: 70 MAVQR-HCTSKISD 82 + + R H K S+ Sbjct: 89 LILTRLHAGGKFSN 102 >gi|294626653|ref|ZP_06705250.1| DNA topoisomerase IV subunit B [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599073|gb|EFF43213.1| DNA topoisomerase IV subunit B [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 629 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + +V+ + G +++D+G GM EE + Sbjct: 31 RPNHLAQEVIDNSVDEALAGHAKQVDVTLYKDG--SCEVSDDGRGMPVDIHPEEKIPGVE 88 Query: 70 MAVQR-HCTSKISD 82 + + R H K S+ Sbjct: 89 LILTRLHAGGKFSN 102 >gi|254797071|ref|YP_003081909.1| DNA gyrase, B subunit [Neorickettsia risticii str. Illinois] gi|254590317|gb|ACT69679.1| DNA gyrase, B subunit [Neorickettsia risticii str. Illinois] Length = 758 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 6/48 (12%) Query: 23 PSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E VI G + DNG GM ++ Sbjct: 12 LHQMVYEVVDNSVDESLAGYCTAIEVVIDVDG--SILVKDNGRGMPTD 57 >gi|225351104|ref|ZP_03742127.1| hypothetical protein BIFPSEUDO_02690 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158560|gb|EEG71802.1| hypothetical protein BIFPSEUDO_02690 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 454 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 25 IAIKELIENSLDAES--SRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHC 76 A+K L+EN+++ + V + G GK ++ D G G+ + +R Sbjct: 325 TAVKNLVENAINYSPEHTTVAVGVGSGDGKVSIRVVDQGIGIPESSLDRIFERFY 379 >gi|90019653|ref|YP_525480.1| DNA gyrase subunit B [Saccharophagus degradans 2-40] gi|89949253|gb|ABD79268.1| DNA gyrase subunit B [Saccharophagus degradans 2-40] Length = 808 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 75/247 (30%), Gaps = 26/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE---------EIPMAVQRH 75 E+++NS+D A + ++ VI ++DNG G+ +E E+ M V H Sbjct: 45 EIVDNSIDEALAGHCNEIKVVIHPN--ESVTVSDNGRGIPTEMHEEGVSAAEVIMTVL-H 101 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S + ++ + V Sbjct: 102 AGGKFDDNTYKV-SGGLHGVGVSVVNALSEVLTLTIRRGGQV--------FEQVYHHGVP 152 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP-KVSFTFSTIKSNRY 194 P T++ ++ T ++ + +R+ I Sbjct: 153 QAPLTVIGETEVSGTQVHFKPSAETFTNIEFHFDQLGKRLRELSFLNSGVRIVLIDERSG 212 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 K + G + + N V E G +N + + Sbjct: 213 KEDVFEYEGGLKAFVGYLNQNKNPINKVIHFSTFREEDGVGVEVALQWNDSFQENIFCYT 272 Query: 255 NGRTVQD 261 N +D Sbjct: 273 NNIPQRD 279 >gi|52145204|ref|YP_081624.1| DNA gyrase subunit B [Bacillus cereus E33L] gi|229094604|ref|ZP_04225671.1| DNA gyrase subunit B [Bacillus cereus Rock3-42] gi|229159054|ref|ZP_04287110.1| DNA gyrase subunit B [Bacillus cereus ATCC 4342] gi|300118805|ref|ZP_07056525.1| DNA gyrase subunit B [Bacillus cereus SJ1] gi|51978673|gb|AAU20223.1| DNA topoisomerase II, ATP-hydrolyzing (DNA gyrase, subunit B) [Bacillus cereus E33L] gi|228624473|gb|EEK81244.1| DNA gyrase subunit B [Bacillus cereus ATCC 4342] gi|228688851|gb|EEL42682.1| DNA gyrase subunit B [Bacillus cereus Rock3-42] gi|298723773|gb|EFI64495.1| DNA gyrase subunit B [Bacillus cereus SJ1] Length = 640 Score = 45.4 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 84 >gi|308189672|ref|YP_003922603.1| topoisomerase IV, subunit B [Mycoplasma fermentans JER] gi|307624414|gb|ADN68719.1| topoisomerase IV, subunit B [Mycoplasma fermentans JER] Length = 637 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 28/66 (42%), Gaps = 14/66 (21%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT-------SEEIPMAV-QRHC 76 E+++NS+D A ++ + + G ++ DNG G+ + + + H Sbjct: 40 EIVDNSIDEALAGYANEISVTLTKNG--SVKVMDNGRGIPVGKTPSGKSAVELVFTELHA 97 Query: 77 TSKISD 82 K ++ Sbjct: 98 GGKFNE 103 >gi|270339919|ref|ZP_06006454.2| sensor histidine kinase [Prevotella bergensis DSM 17361] gi|270333268|gb|EFA44054.1| sensor histidine kinase [Prevotella bergensis DSM 17361] Length = 387 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 29/70 (41%), Gaps = 9/70 (12%) Query: 19 IIERPSI-----AIKELIENSLDA-ESS--RVETVIAGGGKS-FFQITDNGFGMTSEEIP 69 ++ + ++ L +N++DA + R+ + ++D G G+ ++I Sbjct: 276 VVVNLNSSLFEWVLENLSKNAVDAMGADSGRITIGVEDTETKVLVYVSDTGKGIRRKDIS 335 Query: 70 MAVQRHCTSK 79 + T+K Sbjct: 336 NVFRPGFTTK 345 >gi|319776855|ref|YP_004136506.1| topoisomerase iv subunit b [Mycoplasma fermentans M64] gi|238809640|dbj|BAH69430.1| hypothetical protein [Mycoplasma fermentans PG18] gi|318037930|gb|ADV34129.1| Topoisomerase IV subunit B [Mycoplasma fermentans M64] Length = 637 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 28/66 (42%), Gaps = 14/66 (21%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT-------SEEIPMAV-QRHC 76 E+++NS+D A ++ + + G ++ DNG G+ + + + H Sbjct: 40 EIVDNSIDEALAGYANEISVTLTKNG--SVKVMDNGRGIPVGKTPSGKSAVELVFTELHA 97 Query: 77 TSKISD 82 K ++ Sbjct: 98 GGKFNE 103 >gi|229176169|ref|ZP_04303661.1| DNA gyrase subunit B [Bacillus cereus MM3] gi|228607328|gb|EEK64658.1| DNA gyrase subunit B [Bacillus cereus MM3] Length = 640 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TDNG G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSILVTDNGRGIP 84 >gi|168181121|ref|ZP_02615785.1| DNA gyrase, B subunit [Clostridium botulinum NCTC 2916] gi|226947228|ref|YP_002802319.1| DNA gyrase subunit B [Clostridium botulinum A2 str. Kyoto] gi|182668169|gb|EDT80148.1| DNA gyrase, B subunit [Clostridium botulinum NCTC 2916] gi|226844613|gb|ACO87279.1| DNA gyrase, B subunit [Clostridium botulinum A2 str. Kyoto] Length = 637 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + +E I + + D+G GM Sbjct: 43 VYEIVDNSIDEALAGFCTHIEVFIHKD--NSITVVDDGRGMP 82 >gi|115381174|gb|ABI96236.1| DNA topoisomerase IV subunit B [Mesoplasma entomophilum] Length = 552 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + + G + DNG G+ Sbjct: 14 EIVDNSIDEALAGYCTEINVTLEKNG--SVTVADNGRGVP 51 >gi|115381170|gb|ABI96234.1| DNA topoisomerase IV subunit B [Mesoplasma grammopterae] gi|115381172|gb|ABI96235.1| DNA topoisomerase IV subunit B [Mesoplasma grammopterae] Length = 552 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + + G + DNG G+ Sbjct: 14 EIVDNSIDEALAGYCTEINVTLEKNG--SVTVADNGRGVP 51 >gi|94957788|gb|ABF47144.1| DNA topoisomerase IV subunit B [Mesoplasma chauliocola] Length = 551 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + + G + DNG G+ Sbjct: 13 EIVDNSIDEALAGYCTEINVTLEKNG--SVTVADNGRGVP 50 >gi|94676498|ref|YP_588600.1| DNA gyrase, B subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219648|gb|ABF13807.1| DNA gyrase, B subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 802 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 82/242 (33%), Gaps = 25/242 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTS----EEIPMAVQ-----RH 75 E+++N++D A + I + + DNG G+ + EE A + H Sbjct: 42 EVVDNAIDEALAGYCQEILVTIHED--NSISVQDNGRGIPTDIHIEERRSAAEVIMTVLH 99 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+S L L + + QI +G S ++ V Sbjct: 100 AGGKFDDNSYKV-SGGLHGVGISVVNALSEKLELFIKREGH-IYYQIYYNGVPQSPLKIV 157 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 + T +R P+ + F ++ + ++ +R ++ +S + Sbjct: 158 GNSIQTGTTIRF----WPSFIIFTNKKEFQYEILAQRLRELSFLNSGLSISLH--DKRNS 211 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 ++ G I + + ++ + + N Y F Sbjct: 212 QLEHFHYQGGIKAFIKYLNKNKKPIHTNIFYIAVDKCGINVEIAMQW-NDSCQENIYCFT 270 Query: 255 NG 256 N Sbjct: 271 NN 272 >gi|34396102|gb|AAQ65248.1| DNA gyrase subunit B [Mesoplasma tabanidae] Length = 539 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + + G + DNG G+ Sbjct: 13 EIVDNSIDEALAGYCTEINVTLEKNG--SVTVADNGRGVP 50 >gi|28630989|gb|AAO45882.1| DNA gyrase subunit B [Mesoplasma chauliocola] Length = 560 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + + G + DNG G+ Sbjct: 27 EIVDNSIDEALAGYCTEINVTLEKNG--SVTVADNGRGVP 64 >gi|50365125|ref|YP_053550.1| DNA topoisomerase IV subunit B [Mesoplasma florum L1] gi|50363681|gb|AAT75666.1| DNA topoisomerase IV subunit B [Mesoplasma florum L1] Length = 647 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + + + G + DNG G+ Sbjct: 43 EIVDNSIDEALAGYCTEINVTLEKNG--SVTVADNGRGVP 80 >gi|296167139|ref|ZP_06849546.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897461|gb|EFG77060.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 677 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 13/53 (24%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E+++NS+D A +++V+ + G ++ D+G G+ V H T Sbjct: 48 EVVDNSVDEAMAGYATKVDVRLLDDG--SVEVVDDGRGIP-------VAMHAT 91 >gi|305681577|ref|ZP_07404383.1| DNA gyrase, B subunit [Corynebacterium matruchotii ATCC 14266] gi|305658737|gb|EFM48238.1| DNA gyrase, B subunit [Corynebacterium matruchotii ATCC 14266] Length = 673 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + +VE I A GG ++ DNG G+ E Sbjct: 44 EVVDNSVDEAMAGYADKVEVTILADGG---IEVIDNGRGIPVE 83 >gi|227538317|ref|ZP_03968366.1| DNA topoisomerase [Sphingobacterium spiritivorum ATCC 33300] gi|227241832|gb|EEI91847.1| DNA topoisomerase [Sphingobacterium spiritivorum ATCC 33300] Length = 652 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 35/247 (14%), Positives = 82/247 (33%), Gaps = 25/247 (10%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT-----SEE---IPMAVQ- 73 + E+++NS+D A + I G + + DNG G+ E + + + Sbjct: 45 VYEVVDNSIDEAVAGYCDDILVTIHEG--NSISVQDNGRGIPTGINKKENKSALELVMTV 102 Query: 74 RHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRP 133 H K D + + G G + + A+S L + Q G+ V+ Sbjct: 103 LHAGGKFDKDTYKV-SGGLHGVGVSCVNALSTLLIAEVHRDGQIFKQEYEKGKPKYDVKA 161 Query: 134 VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFT----FSTI 189 + + T V P F + + +++ +R +A + T + Sbjct: 162 IGESERTGTTVTFF----PDPEIFTMTTVYNYDTLSNRLRELAFLNKGIRLTIVDEREIL 217 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ 249 ++ + + G E + + G + + + + + +N + Sbjct: 218 DDGSFRKDVFFSEGGLQEFVKFLDGNRQSLIPDPIYVEGIKQGVPVELAL-QYNDTYSEN 276 Query: 250 FYVFING 256 + ++N Sbjct: 277 VHSYVNN 283 >gi|225020879|ref|ZP_03710071.1| hypothetical protein CORMATOL_00887 [Corynebacterium matruchotii ATCC 33806] gi|224946361|gb|EEG27570.1| hypothetical protein CORMATOL_00887 [Corynebacterium matruchotii ATCC 33806] Length = 646 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + +VE I A GG ++ DNG G+ E Sbjct: 17 EVVDNSVDEAMAGYADKVEVTILADGG---IEVIDNGRGIPVE 56 >gi|170760652|ref|YP_001785341.1| DNA gyrase subunit B [Clostridium botulinum A3 str. Loch Maree] gi|169407641|gb|ACA56052.1| DNA gyrase, B subunit [Clostridium botulinum A3 str. Loch Maree] Length = 637 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + +E I + + D+G GM Sbjct: 43 VYEIVDNSIDEALAGFCTHIEVFIHKD--NSITVVDDGRGMP 82 >gi|154499724|ref|ZP_02037762.1| hypothetical protein BACCAP_03381 [Bacteroides capillosus ATCC 29799] gi|150271322|gb|EDM98579.1| hypothetical protein BACCAP_03381 [Bacteroides capillosus ATCC 29799] Length = 411 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 19/38 (50%) Query: 51 KSFFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIH 88 + +I+D+G G+ E++ +R S+ S D I Sbjct: 335 MTQIEISDDGKGIHPEDLYNIFKRFYRSRFSSDVHGIG 372 >gi|154244154|ref|YP_001415112.1| histidine kinase [Xanthobacter autotrophicus Py2] gi|154158239|gb|ABS65455.1| histidine kinase [Xanthobacter autotrophicus Py2] Length = 510 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 30 LIENSLDAES--SRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L+EN+L + R+E + G + I D G G+ E +P +R Sbjct: 399 LVENALKYGAPGKRIEVRLFRENGTAVVSIRDFGPGIPPEHLPRLTERFY 448 >gi|86145026|ref|ZP_01063358.1| hypothetical protein MED222_11453 [Vibrio sp. MED222] gi|85837925|gb|EAQ56037.1| hypothetical protein MED222_11453 [Vibrio sp. MED222] Length = 647 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 13/67 (19%) Query: 22 RPSIAIKELIENSLDAESSRVE--------TVIAGGGKSF-FQITDNGFGMTSEEIPMAV 72 R + LI N+LDA +E K+ + DNG G+ E+IP Sbjct: 539 RLEQVLVNLISNALDA----IEHREQPELSISTQEHSKTIQILVMDNGLGIPEEDIPHLF 594 Query: 73 QRHCTSK 79 T K Sbjct: 595 DPFYTRK 601 >gi|114564488|ref|YP_752002.1| DNA topoisomerase IV subunit B [Shewanella frigidimarina NCIMB 400] gi|114335781|gb|ABI73163.1| DNA topoisomerase IV subunit B [Shewanella frigidimarina NCIMB 400] Length = 628 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 74/209 (35%), Gaps = 29/209 (13%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EIP 69 RP+ +E+I+NS+D A ++++E V+ + ++TD+G GM + + Sbjct: 31 RPNHLGQEVIDNSVDEALAGHATKIEVVLHTD--NSLEVTDDGRGMPVDIHAEEGIPGVE 88 Query: 70 MAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAISG 125 + + + H K S+ + G G + + A+S + + R + Sbjct: 89 LILTKLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSTRVEISVRRDAQIYQMAFENGFKV 147 Query: 126 EKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS- 183 E++ N GT V +++ S + + ++R A+ P + Sbjct: 148 EELVVTGTCGRRNTGTRVHFW-------PDVSYFDSPNFSVSKLIYILRAKAVLCPGLRI 200 Query: 184 -FTFSTIKSNRYKMNFQSTNGNFPERISQ 211 FT E I Sbjct: 201 KFTNKQNGDVHEWFYESGLTDYLKEAIKD 229 >gi|312077645|ref|XP_003141395.1| heat shock protein 75 [Loa loa] gi|307763442|gb|EFO22676.1| heat shock protein 75 [Loa loa] Length = 675 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 73/233 (31%), Gaps = 53/233 (22%) Query: 27 IKELIENSLDA------------ESSRV--ETVI---AGGGKSFFQITDNGFGMTSEEIP 69 I+ELI N+ DA + + + E I DNG GM E++ Sbjct: 74 IRELISNASDALEKRRCKHLETNKDTNIAYEIKITTDEDA--RLIIFEDNGIGMDKEDLV 131 Query: 70 MAVQRHCTS---KISDD---FSNIHT--------FGFRGEALPSIGAVS-HLTLMSRPPQ 114 + S K ++ ++ T GF S V+ ++ + +R Sbjct: 132 NCLGTIAKSGSKKFMEEQSSLGHVSTESIIGQFGVGF-----YSAFMVANNVVVKTRKED 186 Query: 115 NNTGAQIAISGEKISSVRPVA-MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIR 173 ++ G +G SV V + G+ +EV +E + + + +VI Sbjct: 187 SDKGYLWKWNGGDAYSVEEVDSLPVGSRIEV--------TLRPGSATEFAKKDKVVEVIS 238 Query: 174 RMAIAYPKVSFTFSTIKSNRYKMNFQSTNG--NFPERISQVIGEDFINNAVEL 224 + + ++ + ++ T + V + Sbjct: 239 KYSYF---ITLPITVNGERVNTVDAIWTMNPKEVTSEMHDVFFRQLAKTHLPH 288 >gi|229817001|ref|ZP_04447283.1| hypothetical protein BIFANG_02256 [Bifidobacterium angulatum DSM 20098] gi|229785746|gb|EEP21860.1| hypothetical protein BIFANG_02256 [Bifidobacterium angulatum DSM 20098] Length = 717 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +S +E I G ++ D+G G+ + Sbjct: 92 VYEIVDNSVDEALAGYASHIEVTILPDNG---IRVVDDGRGIPVD 133 >gi|145578025|gb|ABP82731.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus weihenstephanensis] Length = 632 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TD+G G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIVVTDDGRGIP 77 >gi|145577989|gb|ABP82713.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus weihenstephanensis] gi|145578003|gb|ABP82720.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar vazensis] gi|145578011|gb|ABP82724.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus weihenstephanensis] Length = 632 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TD+G G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIVVTDDGRGIP 77 >gi|145577973|gb|ABP82705.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus weihenstephanensis] Length = 632 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TD+G G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIVVTDDGRGIP 77 >gi|145577991|gb|ABP82714.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus mycoides] Length = 631 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TD+G G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIVVTDDGRGIP 77 >gi|148263898|ref|YP_001230604.1| multi-sensor signal transduction histidine kinase [Geobacter uraniireducens Rf4] gi|146397398|gb|ABQ26031.1| multi-sensor signal transduction histidine kinase [Geobacter uraniireducens Rf4] Length = 832 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 7/53 (13%) Query: 32 ENSLDAES----SRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 +N+L + ++E A G + ++DNG G+ E+IP+ + T K Sbjct: 739 KNAL--GALPEGGKIEISTALAGDAAIINVSDNGQGIEPEDIPLLFEPFFTRK 789 >gi|302525142|ref|ZP_07277484.1| heat shock protein 90 [Streptomyces sp. AA4] gi|302434037|gb|EFL05853.1| heat shock protein 90 [Streptomyces sp. AA4] Length = 647 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 52/153 (33%), Gaps = 40/153 (26%) Query: 27 IKELIENSLDA--------------ESSR----VETVIAGGGKSFFQITDNGFGMTSEEI 68 ++EL+ N+ DA + +E ++ ++ + DNG GM+ +++ Sbjct: 57 LRELVSNASDALDKLKLETYRDKDLRADTDNLHIEILLDSDARTL-TVRDNGIGMSRDDV 115 Query: 69 PMAVQRHCTS-------KISD-------DFSNIHTFGFRGEALPSIGAVS-HLTLMSRPP 113 + S K+ + D GF S V+ +TL++R Sbjct: 116 VNLIGTIAKSGTADFLRKLKESKESAGQDLIGQFGVGF-----YSSFMVADKVTLVTRRA 170 Query: 114 QNNTGAQIAIS-GEKISSVRPVAMNPGTIVEVR 145 + G + + + GT V + Sbjct: 171 GADEGVRWESTGEGTYTIESLSEAPQGTSVTLH 203 >gi|190710561|gb|ACE95111.1| gyrase subunit B [Bacillus thuringiensis serovar novosibirsk] Length = 627 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TD+G G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIVVTDDGRGIP 77 >gi|188991959|ref|YP_001903969.1| DNA topoisomerase IV subunit B [Xanthomonas campestris pv. campestris str. B100] gi|167733719|emb|CAP51924.1| Topoisomerase IV subunit B [Xanthomonas campestris pv. campestris] Length = 673 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + +VE + G +++D+G GM EE + Sbjct: 75 RPNHLAQEVIDNSVDEALAGHAKQVEVTLYKDG--SCEVSDDGRGMPVDMHPEEKIPGVE 132 Query: 70 MAVQR-HCTSKISD 82 + + R H K S+ Sbjct: 133 LILTRLHAGGKFSN 146 >gi|21242463|ref|NP_642045.1| DNA topoisomerase IV subunit B [Xanthomonas axonopodis pv. citri str. 306] gi|325924935|ref|ZP_08186364.1| DNA topoisomerase IV subunit B [Xanthomonas perforans 91-118] gi|21107909|gb|AAM36581.1| topoisomerase IV subunit B [Xanthomonas axonopodis pv. citri str. 306] gi|325544658|gb|EGD16012.1| DNA topoisomerase IV subunit B [Xanthomonas perforans 91-118] Length = 629 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + +VE + G +++D+G GM EE + Sbjct: 31 RPNHLAQEVIDNSVDEALAGHAKQVEVTLYKDG--SCEVSDDGRGMPVDIHPEEKIPGVE 88 Query: 70 MAVQR-HCTSKISD 82 + + R H K S+ Sbjct: 89 LILTRLHAGGKFSN 102 >gi|21231148|ref|NP_637065.1| DNA topoisomerase IV subunit B [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768844|ref|YP_243606.1| DNA topoisomerase IV subunit B [Xanthomonas campestris pv. campestris str. 8004] gi|21112786|gb|AAM40989.1| topoisomerase IV subunit B [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574176|gb|AAY49586.1| topoisomerase IV subunit B [Xanthomonas campestris pv. campestris str. 8004] Length = 634 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + +VE + G +++D+G GM EE + Sbjct: 36 RPNHLAQEVIDNSVDEALAGHAKQVEVTLYKDG--SCEVSDDGRGMPVDMHPEEKIPGVE 93 Query: 70 MAVQR-HCTSKISD 82 + + R H K S+ Sbjct: 94 LILTRLHAGGKFSN 107 >gi|78047304|ref|YP_363479.1| DNA topoisomerase IV subunit B [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035734|emb|CAJ23425.1| topoisomerase IV subunit B [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 673 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + +VE + G +++D+G GM EE + Sbjct: 75 RPNHLAQEVIDNSVDEALAGHAKQVEVTLYKDG--SCEVSDDGRGMPVDIHPEEKIPGVE 132 Query: 70 MAVQR-HCTSKISD 82 + + R H K S+ Sbjct: 133 LILTRLHAGGKFSN 146 >gi|326692337|ref|ZP_08229342.1| DNA gyrase, B subunit [Leuconostoc argentinum KCTC 3773] Length = 669 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N +D A +S + I + +TD+G G+ + Sbjct: 71 EIVDNGIDEALAGFASHITVTIEKD--NSITVTDDGRGIPVD 110 >gi|302554633|ref|ZP_07306975.1| two-component system sensor kinase [Streptomyces viridochromogenes DSM 40736] gi|302472251|gb|EFL35344.1| two-component system sensor kinase [Streptomyces viridochromogenes DSM 40736] Length = 558 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 14/81 (17%) Query: 5 KLSEKIINQIAAGEIIER-PSIAIKELIENSLDAESS----RVETVIAGGGKSFF-QITD 58 +L +++I+ R + L++N+LDA + RVE + G++ ++ D Sbjct: 418 RLPDRLID--------SRGLVTVVGNLVDNALDAVAGEPHARVEVELRAEGRTAILRVRD 469 Query: 59 NGFGMTSEEIPMAVQRHCTSK 79 G G+ E ++K Sbjct: 470 TGPGIPLEHRESIFTEGWSTK 490 >gi|300172307|ref|YP_003771472.1| DNA gyrase subunit B [Leuconostoc gasicomitatum LMG 18811] gi|299886685|emb|CBL90653.1| DNA gyrase, B subunit [Leuconostoc gasicomitatum LMG 18811] Length = 669 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N +D A +S + I + +TD+G G+ + Sbjct: 71 EIVDNGIDEALAGFASHITVTIEKD--NSITVTDDGRGIPVD 110 >gi|296110748|ref|YP_003621129.1| DNA gyrase, B subunit [Leuconostoc kimchii IMSNU 11154] gi|295832279|gb|ADG40160.1| DNA gyrase, B subunit [Leuconostoc kimchii IMSNU 11154] Length = 669 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N +D A +S + I + +TD+G G+ + Sbjct: 71 EIVDNGIDEALAGFASHITVTIEKD--NSITVTDDGRGIPVD 110 >gi|241895511|ref|ZP_04782807.1| DNA topoisomerase (ATP-hydrolyzing) [Weissella paramesenteroides ATCC 33313] gi|241871257|gb|EER75008.1| DNA topoisomerase (ATP-hydrolyzing) [Weissella paramesenteroides ATCC 33313] Length = 648 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N +D A ++ + I + + DNG G+ + Sbjct: 52 EIVDNGIDEALAGFANHITVTIEKD--NSITVIDNGRGIPVD 91 >gi|227432902|ref|ZP_03914846.1| DNA gyrase subunit B [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351335|gb|EEJ41617.1| DNA gyrase subunit B [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 672 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N +D A +S + I + +TD+G G+ + Sbjct: 74 EIVDNGIDEALAGFASHITVTIEKD--NSITVTDDGRGIPVD 113 >gi|188589486|ref|YP_001921145.1| hypothetical protein CLH_1761 [Clostridium botulinum E3 str. Alaska E43] gi|188499767|gb|ACD52903.1| conserved hypothetical protein [Clostridium botulinum E3 str. Alaska E43] Length = 679 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 20 IERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAV 72 + PSI + ELI+N D+ S ++ I K I D G G++ E+I Sbjct: 21 VASPSIVLSELIKNGFDSNSKTIDINI-DTSKHQVTILDKGEGLSIEDIKKLG 72 >gi|145577971|gb|ABP82704.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus mycoides] Length = 632 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TD+G G+ Sbjct: 40 EIVDNSIDEALAGYCDEINVSIEED--NSIVVTDDGRGIP 77 >gi|159900890|ref|YP_001547137.1| ATPase domain-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159893929|gb|ABX07009.1| ATP-binding region ATPase domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 594 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 20/75 (26%) Query: 8 EKIINQIAAGEIIERPSI----AIKELIENSLDAESSR----------VETVIAGGGKSF 53 E +I +A E AI+ELI+N+ D+ R + I K Sbjct: 11 EHLIRLLA-----ENLYSDPHVAIRELIQNASDSCVRRLAQQGVFQPAIHVRI-DPTKRL 64 Query: 54 FQITDNGFGMTSEEI 68 + DNG GM E++ Sbjct: 65 LVVEDNGTGMAREDV 79 >gi|41406103|ref|NP_958939.1| DNA gyrase subunit B [Mycobacterium avium subsp. paratuberculosis K-10] gi|118463778|ref|YP_879308.1| DNA gyrase subunit B [Mycobacterium avium 104] gi|254773058|ref|ZP_05214574.1| DNA gyrase subunit B [Mycobacterium avium subsp. avium ATCC 25291] gi|13431552|sp|Q9L7L3|GYRB_MYCPA RecName: Full=DNA gyrase subunit B gi|6969273|gb|AAF33694.1| putative gyrB [Mycobacterium avium subsp. paratuberculosis] gi|41394451|gb|AAS02322.1| GyrB [Mycobacterium avium subsp. paratuberculosis K-10] gi|118165065|gb|ABK65962.1| DNA gyrase, B subunit [Mycobacterium avium 104] Length = 677 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 13/53 (24%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E+++NS+D A + RV+ I G ++ DNG G+ V H T Sbjct: 48 EVVDNSVDEAMAGYADRVDVRILDDG--SVEVADNGRGIP-------VAMHAT 91 >gi|116617179|ref|YP_817550.1| DNA gyrase subunit B [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096026|gb|ABJ61177.1| DNA gyrase subunit B [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 672 Score = 45.4 bits (106), Expect = 0.025, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N +D A +S + I + +TD+G G+ + Sbjct: 74 EIVDNGIDEALAGFASHITVTIEKD--NSITVTDDGRGIPVD 113 >gi|333029415|ref|ZP_08457476.1| DNA gyrase, B subunit [Bacteroides coprosuis DSM 18011] gi|332740012|gb|EGJ70494.1| DNA gyrase, B subunit [Bacteroides coprosuis DSM 18011] Length = 652 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A ++ I + + DNG G+ ++ Sbjct: 47 VYEVVDNSIDEALAGYCDHIDVTINED--NSITVKDNGRGIPTD 88 >gi|295099695|emb|CBK88784.1| Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Eubacterium cylindroides T2-87] Length = 186 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N +D A +S+++ I + DNG GM Sbjct: 62 EIVDNGIDEALAGFASQIDVTIEKD--DIIAVRDNGRGMP 99 >gi|260579565|ref|ZP_05847436.1| DNA gyrase subunit B [Corynebacterium jeikeium ATCC 43734] gi|258602336|gb|EEW15642.1| DNA gyrase subunit B [Corynebacterium jeikeium ATCC 43734] Length = 674 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 16/73 (21%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP--------MAVQRH 75 E+++NS+D A + V + A GG ++ D+G G+ E+ P + Q H Sbjct: 46 EVVDNSVDEAMAGYAKEVSVTLLADGG---VEVIDDGRGIPVEDHPTGPPTVQVVMTQLH 102 Query: 76 CTSKISDDFSNIH 88 K D + Sbjct: 103 AGGKFDSDSYAVS 115 >gi|254456050|ref|ZP_05069479.1| DNA gyrase, B subunit [Candidatus Pelagibacter sp. HTCC7211] gi|207083052|gb|EDZ60478.1| DNA gyrase, B subunit [Candidatus Pelagibacter sp. HTCC7211] Length = 686 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + I G + D+G G+ + Sbjct: 42 VYEVVDNSIDEALAGHCKNINVRINSDGT--ITVNDDGRGIPVD 83 >gi|169823702|ref|YP_001691313.1| DNA gyrase B subunit [Finegoldia magna ATCC 29328] gi|167830507|dbj|BAG07423.1| DNA gyrase B subunit [Finegoldia magna ATCC 29328] Length = 638 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 30/155 (19%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQ--------- 73 + E+++NS+D A ++ I + + D+G G+ E P + Sbjct: 41 VYEVVDNSIDEALAGVCDLIKVTIKKD--NSIIVEDDGSGIPVETHPKTGKSTLETVLTV 98 Query: 74 RHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRP 133 H K S+D ++ G G + + A+S L++R ++ + K + Sbjct: 99 LHAGGKFSNDAYQ-YSGGLHGVGVSCVNALS-TYLIARVKRDGKMYEQRFEKGKTVTGLT 156 Query: 134 V-------------AMNPGTIVEVRDLFFTIPARL 155 V M TI E + + A+ Sbjct: 157 VVKENVRGTGTTIEFMPDDTIFETLNFDKNVLAKR 191 >gi|149278877|ref|ZP_01885012.1| DNA topoisomerase (ATP-hydrolyzing), subunit B (DNA gyrase) [Pedobacter sp. BAL39] gi|149230496|gb|EDM35880.1| DNA topoisomerase (ATP-hydrolyzing), subunit B (DNA gyrase) [Pedobacter sp. BAL39] Length = 652 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A + + I + ++ DNG G+ Sbjct: 45 VYEVVDNSIDEALAGHADTIYVNILED--NSIRVEDNGRGIP 84 >gi|68535067|ref|YP_249772.1| DNA gyrase subunit B [Corynebacterium jeikeium K411] gi|68262666|emb|CAI36154.1| DNA gyrase subunit B [Corynebacterium jeikeium K411] Length = 674 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 16/73 (21%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP--------MAVQRH 75 E+++NS+D A + V + A GG ++ D+G G+ E+ P + Q H Sbjct: 46 EVVDNSVDEAMAGYAKEVSVTLLADGG---VEVIDDGRGIPVEDHPTGPPTVQVVMTQLH 102 Query: 76 CTSKISDDFSNIH 88 K D + Sbjct: 103 AGGKFDSDSYAVS 115 >gi|31071473|dbj|BAC76785.1| DNA gyrase B subunit [Tolypothrix sp. IAM M-259] Length = 396 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + VE I G +TD+G G+ ++ Sbjct: 10 VYEVVDNSIDEALAGYCTHVEVDINADG--SVTVTDDGRGIPTD 51 >gi|325000908|ref|ZP_08122020.1| sensor histidine kinase [Pseudonocardia sp. P1] Length = 681 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 8/55 (14%), Positives = 22/55 (40%), Gaps = 3/55 (5%) Query: 23 PSIAIKELIENSLDAESS-RVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 ++ L++N+ ++ V + G + + D+G G+ + +R Sbjct: 406 LVRVVRNLVDNA-KRHATSTVTVSVGTDGATAVIDVEDDGCGVPEADRARVFERF 459 >gi|302557976|ref|ZP_07310318.1| two component sensor histidine kinase [Streptomyces griseoflavus Tu4000] gi|302475594|gb|EFL38687.1| two component sensor histidine kinase [Streptomyces griseoflavus Tu4000] Length = 557 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 14/81 (17%) Query: 5 KLSEKIINQIAAGEIIER-PSIAIKELIENSLDAESS----RVETVIAGGGKSFF-QITD 58 +L +++I+ R + L++N+LDA + RVE + G++ + D Sbjct: 416 RLPDRLID--------PRGLVTVVGNLVDNALDAVAGTPHARVEVELRAEGRTAVLVVRD 467 Query: 59 NGFGMTSEEIPMAVQRHCTSK 79 G G+ E + ++K Sbjct: 468 TGPGIPPERRELIFTEGWSTK 488 >gi|322420000|ref|YP_004199223.1| signal transduction histidine kinase, nitrogen specific, NtrB [Geobacter sp. M18] gi|320126387|gb|ADW13947.1| signal transduction histidine kinase, nitrogen specific, NtrB [Geobacter sp. M18] Length = 541 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 7/47 (14%) Query: 35 LDAESSRVETVIAGGGKS--FFQITDNGFGMTSEEIPMAVQRHCTSK 79 +DA +RV GG+S + DNG GM+ ++ + T+K Sbjct: 460 IDATLTRV-----NGGRSEVRISVRDNGSGMSQADVKRVFEPFFTTK 501 >gi|218461624|ref|ZP_03501715.1| hypothetical protein RetlK5_19961 [Rhizobium etli Kim 5] Length = 459 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 7/85 (8%) Query: 31 IENSLDAESSRVETVIAGGGKS--FFQITDNGFGMTSEEIPMAVQRHCTSKISDDFSNIH 88 I+N + A++ RV+ +A I D+G GM E+ A++ SK D + Sbjct: 2 IDNCITAKARRVDI-VADTTSDEPMLTIIDDGHGMDDVELIDAMRLG--SKNPLDVRHAK 58 Query: 89 TFGFRGEAL--PSIGAVSHLTLMSR 111 G G L S LT++SR Sbjct: 59 DLGRFGLGLKSASFSQCRRLTVISR 83 >gi|167644129|ref|YP_001681792.1| DNA gyrase subunit B [Caulobacter sp. K31] gi|167346559|gb|ABZ69294.1| DNA gyrase, B subunit [Caulobacter sp. K31] Length = 830 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A +++VE ++ G +TD+G G+ + Sbjct: 70 VYEVVDNAIDEALAGHATKVEVILNADG--SVTVTDDGRGIPVD 111 >gi|163938018|ref|YP_001642902.1| DNA gyrase subunit B [Bacillus weihenstephanensis KBAB4] gi|229136319|ref|ZP_04265066.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST196] gi|163860215|gb|ABY41274.1| DNA gyrase, B subunit [Bacillus weihenstephanensis KBAB4] gi|228647191|gb|EEL03279.1| DNA gyrase subunit B [Bacillus cereus BDRD-ST196] Length = 640 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TD+G G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSIVVTDDGRGIP 84 >gi|262377153|ref|ZP_06070378.1| DNA topoisomerase IV, B subunit [Acinetobacter lwoffii SH145] gi|262307891|gb|EEY89029.1| DNA topoisomerase IV, B subunit [Acinetobacter lwoffii SH145] Length = 626 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 6/49 (12%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+N++D A ++++ + G + DNG GM + Sbjct: 30 RPNHLAQEVIDNAVDEALAGHANKITVTVYKDG--SLSVEDNGRGMPVD 76 >gi|260774538|ref|ZP_05883451.1| DNA gyrase subunit B [Vibrio metschnikovii CIP 69.14] gi|260610444|gb|EEX35650.1| DNA gyrase subunit B [Vibrio metschnikovii CIP 69.14] Length = 781 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 78/246 (31%), Gaps = 22/246 (8%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT-----SEEIPMA----VQRH 75 E+++NS+D A + I + ++D+G G+ E + A H Sbjct: 18 EVVDNSIDEALAGHCKDIVVTIHED--NSVSVSDDGRGIPTELHTEENVSAAEVIMTVLH 75 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S L++ Q G + + V Sbjct: 76 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEKVLLTIYRGGKIHTQTYRHGVPQAPLAVVG 134 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 T +R P+ F + + +++ +R ++ VS + K Sbjct: 135 DTERTGTTLRF----WPSAETFT-NIEFHYDILAKRLRELSFLNSGVSIRLQ-DEREADK 188 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G ++ + + + + +N G Y F N Sbjct: 189 HDHFMYEGGIRAFVTHLNRNKTPIHDKVFHFNHDREDGTSVEVAMQWNDGFQENIYCFTN 248 Query: 256 GRTVQD 261 +D Sbjct: 249 NIPQRD 254 >gi|300774234|ref|ZP_07084101.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sphingobacterium spiritivorum ATCC 33861] gi|300758913|gb|EFK55742.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Sphingobacterium spiritivorum ATCC 33861] Length = 652 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 35/247 (14%), Positives = 84/247 (34%), Gaps = 25/247 (10%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT-----SEE---IPMAVQ- 73 + E+++NS+D A + + I G + + DNG G+ E + + + Sbjct: 45 VYEVVDNSIDEAVAGYCNDILVTIHEG--NSISVQDNGRGIPTGINKKENKSALELVMTV 102 Query: 74 RHCTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRP 133 H K D + + G G + + A+S L + Q G+ V+ Sbjct: 103 LHAGGKFDKDTYKV-SGGLHGVGVSCVNALSTLLIAEVHRDGQIFKQEYEKGKPKYDVKA 161 Query: 134 VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFT----FSTI 189 + + T V P F + + +++ +R +A + T + Sbjct: 162 IGESERTGTTVTFF----PDPEIFTMTTVYNYDTLSNRLRELAFLNKGIRLTIVDEREIL 217 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ 249 ++ + + G E + + G + + + + + + +N + Sbjct: 218 DDGSFRKDVFFSEGGLQEFVKFLDGNRQSLISNPIYVEGIKQGVPVELAL-QYNDTYSEN 276 Query: 250 FYVFING 256 + ++N Sbjct: 277 VHSYVNN 283 >gi|253988247|ref|YP_003039603.1| two-component sensor histidine kinase uhpb, phosphorylates uhpa [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638761|emb|CAR67378.1| two-component sensor histidine kinase uhpb,phosphorylates uhpa [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779697|emb|CAQ82858.1| two-component sensor histidine kinase uhpb, phosphorylates uhpa [Photorhabdus asymbiotica] Length = 514 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 8/65 (12%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIEN-SLDAESSRVETVIAGGGKSFF--QITDNGF 61 +L + +N+ +I ++EL+ N S A+++ + + + +I+DNG Sbjct: 410 QLPQNPVNE----TVIFTLYRLVQELLNNISKHAKATHINITLRQ-RRDVIELRISDNGI 464 Query: 62 GMTSE 66 G+T + Sbjct: 465 GITED 469 >gi|163783146|ref|ZP_02178140.1| gyrase B [Hydrogenivirga sp. 128-5-R1-1] gi|159881480|gb|EDP74990.1| gyrase B [Hydrogenivirga sp. 128-5-R1-1] Length = 798 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N++D A + V +I G + D+G G+ + Sbjct: 54 EILDNAVDEAMAGYAKNVSVIIHDDG--SITVEDDGRGIPVD 93 >gi|147921290|ref|YP_684896.1| type II DNA topoisomerase II (gyrase), subunit B [uncultured methanogenic archaeon RC-I] gi|110620292|emb|CAJ35570.1| type II DNA topoisomerase II (gyrase), subunit B [uncultured methanogenic archaeon RC-I] Length = 635 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + ++ I G +TDNG G+ E Sbjct: 44 VYEVVDNSIDEALAGYCNAIDVTINPNG--SVTVTDNGRGIPVE 85 >gi|332638148|ref|ZP_08417011.1| DNA gyrase subunit B [Weissella cibaria KACC 11862] Length = 648 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N +D A + + I + +TDNG G+ + Sbjct: 52 EIVDNGIDEALAGFADHITVTIEKD--NSITVTDNGRGIPVD 91 >gi|311992510|ref|YP_004009378.1| gp60plus39 DNA topoisomerase subunit [Acinetobacter phage Ac42] gi|298684293|gb|ADI96254.1| gp60plus39 DNA topoisomerase subunit [Acinetobacter phage Ac42] Length = 608 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 10/58 (17%) Query: 18 EIIERPSIAIKELIENSLD-A------ESSRVETVIAGGGKSFFQITDNGFGMTSEEI 68 E + I ELI+NSLD A ++++ I G + I DNG G+ + + Sbjct: 43 EYVPGLIKIISELIDNSLDEAIRTDFEYANKISVDITG---TSVTIKDNGRGIPQDNV 97 >gi|197106831|ref|YP_002132208.1| DNA gyrase, B subunit [Phenylobacterium zucineum HLK1] gi|196480251|gb|ACG79779.1| DNA gyrase, B subunit [Phenylobacterium zucineum HLK1] Length = 812 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 27/44 (61%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A +++VE ++ G +TD+G G+ ++ Sbjct: 55 VYEVVDNAIDEALAGHATKVEVILNADG--SCTVTDDGRGIPTD 96 >gi|171317336|ref|ZP_02906531.1| integral membrane sensor signal transduction histidine kinase [Burkholderia ambifaria MEX-5] gi|171097477|gb|EDT42316.1| integral membrane sensor signal transduction histidine kinase [Burkholderia ambifaria MEX-5] Length = 440 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Query: 20 IERPSI---AIKELIENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 + RP + L++N+L A ++ ++ A GG + + D G G+ +++ + Sbjct: 328 VTRPKALRRIVGNLVDNALKFAGAAEIDVQAASGGGAVIAVLDRGPGIPDDQLDAVFEPF 387 >gi|82798478|gb|ABB91902.1| DNA gyrase subunit B [Acholeplasma vituli] gi|82798480|gb|ABB91903.1| DNA gyrase subunit B [Acholeplasma vituli] Length = 546 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLDAE----SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D +S + I G ++TD+G G+ + Sbjct: 17 EIVDNSIDESMVGYASEISLEIQKGNI--IRVTDDGRGIPVD 56 >gi|78042822|ref|YP_360841.1| extracellular solute-binding protein [Carboxydothermus hydrogenoformans Z-2901] gi|77994937|gb|ABB13836.1| extracellular solute-binding protein, family 3/sensory box histidine kinase [Carboxydothermus hydrogenoformans Z-2901] Length = 656 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 7/55 (12%) Query: 30 LIENSLDA----ESSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N++DA ++ A G K ++ D G G+ + + TSK Sbjct: 552 LLLNAIDAIQDKG--EIKIKAAEYGDKIKIEVQDTGIGIPPQYLNQIFNLFFTSK 604 >gi|70704907|gb|AAZ06865.1| DNA gyrase subunit B [Acholeplasma vituli] Length = 538 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLDAE----SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D +S + I G ++TD+G G+ + Sbjct: 13 EIVDNSIDESMVGYASEISLEIQKGNI--IRVTDDGRGIPVD 52 >gi|256545594|ref|ZP_05472953.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170] gi|256398719|gb|EEU12337.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170] Length = 805 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 9/70 (12%) Query: 2 KIRKLSEKIINQIAAGEIIERPSIA-IKELIENSLDAESSRVETVIA-----GGGKSFFQ 55 KI+ ++I Q+ GE + + + ELI+NS DA+++ + I G+ Sbjct: 7 KIKV-DSRLIYQL--GEALIDNNKVALMELIKNSSDADATICKLTIDTSYQSEHGRGKIT 63 Query: 56 ITDNGFGMTS 65 I DNG GM Sbjct: 64 IEDNGNGMNE 73 >gi|225023582|ref|ZP_03712774.1| hypothetical protein EIKCOROL_00441 [Eikenella corrodens ATCC 23834] gi|224943677|gb|EEG24886.1| hypothetical protein EIKCOROL_00441 [Eikenella corrodens ATCC 23834] Length = 657 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 71/216 (32%), Gaps = 29/216 (13%) Query: 21 ERPSIAIKELIENSLD-A--E-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 + P+ +E I+N+ D A +SR++ I G ++DNG G+ EE + Sbjct: 30 DSPTHICQEAIDNAADEALGGFASRIDVEIHEDG--SLSVSDNGRGIPVGLHPEENVPVV 87 Query: 69 PMAVQR-HCTSKISD---DFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAI 123 + R H K + D + + G G + A+S L + R Sbjct: 88 ELVFTRLHAGGKFNKTSGDGAYAFSGGLHGVGVSVTNALSRRLEVAVRREGCEYRIAFVG 147 Query: 124 SGEKISSVRPVAMNP---GTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP 180 GT + + P + +S + I ++R A+ P Sbjct: 148 GDVVEPLTETGKCPAKDSGTTLRI------WPDAR-YFESPNYDIAEIERLLRAKAVLLP 200 Query: 181 KVSFTFSTIKSNRYKMNFQSTNGNFPERISQVIGED 216 V+ T + + + + ++ E Sbjct: 201 GVTVTLTRWHNGLPETQTWHYPDGLEGYLKTLLAEQ 236 >gi|145578013|gb|ABP82725.1| DNA topoisomerase II ATP-hydrolyzing DNA gyrase subunit B [Bacillus thuringiensis serovar graciosensis] Length = 632 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 6/38 (15%) Query: 31 IENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 ++NS+D A + I + ++TDNG G+ Sbjct: 42 VDNSIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|56962549|ref|YP_174275.1| two-component sensor histidine kinase [Bacillus clausii KSM-K16] gi|56908787|dbj|BAD63314.1| two-component sensor histidine kinase [Bacillus clausii KSM-K16] Length = 422 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 5/58 (8%) Query: 30 LIEN---SLDAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 L+ N S+D E + + I ++F++TDNG G+ E++ + T+K +D Sbjct: 319 LLANAIESIDKEGT-ILLSIYEKNEMTYFEVTDNGAGIAEEDMHHLCEPGFTTKYRED 375 >gi|45358552|ref|NP_988109.1| DNA topoisomerase VI subunit B [Methanococcus maripaludis S2] gi|44921310|emb|CAF30545.1| DNA topoisomerase VI B [Methanococcus maripaludis S2] Length = 664 Score = 45.4 bits (106), Expect = 0.026, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%) Query: 25 IAIKELIENSLDA--ESS---RVETVIAGGGKSF--FQITDNGFGMTSEEIPMAVQR-HC 76 + EL+ NSLDA ES + I G I DNG G+ E +P + Sbjct: 44 TIVHELVTNSLDACEESEILPEITVEIKKIGSETFGVNIEDNGPGIPPEFVPKVFGKMLA 103 Query: 77 TSKIS 81 SK+ Sbjct: 104 GSKLH 108 >gi|320538929|ref|ZP_08038605.1| DNA topoisomerase IV, subunit B [Serratia symbiotica str. Tucson] gi|320031089|gb|EFW13092.1| DNA topoisomerase IV, subunit B [Serratia symbiotica str. Tucson] Length = 631 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 73/209 (34%), Gaps = 23/209 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + R+E ++ ++ D+G GM EE + Sbjct: 31 TRPNHLGQEVIDNSVDEALANHAKRIEVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + + N G + Sbjct: 89 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVNVKRDGNVYGIAFENGDK 147 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYP--KVSF 184 + F S + + ++ +++ A+ P ++ F Sbjct: 148 VQDLTVTGTCGKRNTGTSVHFW----PDEQFFDSPRFSVSRLSHLLKAKAVLCPGVEIDF 203 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQVI 213 + + E ++ ++ Sbjct: 204 IDQVNNTEQRWCYQDGLTDYLMEAVNGLM 232 >gi|197123428|ref|YP_002135379.1| integral membrane sensor hybrid histidine kinase [Anaeromyxobacter sp. K] gi|196173277|gb|ACG74250.1| integral membrane sensor hybrid histidine kinase [Anaeromyxobacter sp. K] Length = 702 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 4/58 (6%) Query: 22 RPSIAIKELIENS---LDAESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 R + + L++N+ D + V G++ ++ D+G GM + + Q Sbjct: 454 RIAQVVGNLVQNAAKFTDGGGTVTVAVDATPAGRARVRVRDDGIGMPPDVLQRLFQPF 511 >gi|171920695|ref|ZP_02931917.1| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185178763|ref|ZP_02554678.2| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024457|ref|ZP_02570760.2| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518714|ref|ZP_02557214.2| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524147|ref|ZP_02557455.2| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867481|ref|ZP_03079485.1| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273562|ref|ZP_03206098.1| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554430|ref|YP_002284500.1| DNA gyrase subunit B [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550770|ref|ZP_03771719.1| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551162|ref|ZP_03772108.1| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903433|gb|EDT49722.1| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209375|gb|EDU06418.1| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018752|gb|EDU56792.1| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997713|gb|EDU66810.1| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660124|gb|EDX53504.1| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660957|gb|EDX54210.1| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198250082|gb|EDY74862.1| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541931|gb|ACI60160.1| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225378977|gb|EEH01342.1| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379924|gb|EEH02286.1| DNA gyrase, B subunit [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 650 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 6/40 (15%) Query: 29 ELIENSLD-A--E-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ V+ +I G ++ D+G G+ Sbjct: 46 EIVDNSIDEAMGGFATVVKVIIKKDGV--IRVEDDGRGIP 83 >gi|76802387|ref|YP_327395.1| DNA topoisomerase II subunit B (DNA gyrase) [Natronomonas pharaonis DSM 2160] gi|76558252|emb|CAI49840.1| DNA topoisomerase II subunit B (DNA gyrase) [Natronomonas pharaonis DSM 2160] Length = 639 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A +E VI G + D+G G+ + Sbjct: 41 VYEVVDNAIDEALAGYCDTIEVVINDDG--SVTVRDDGRGIPVD 82 >gi|18916411|dbj|BAB85501.1| DNA gyrase subunit B [Rhodopseudomonas sp. B29] Length = 303 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 + E+++N++D A ++RVE ++ A GG + D+G G+ + Sbjct: 12 VYEVVDNAIDEALAGYATRVEVILNADGG---VTVRDDGRGIPVD 53 >gi|329298650|ref|ZP_08255986.1| DNA topoisomerase IV subunit B [Plautia stali symbiont] Length = 631 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 29/211 (13%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + RVE ++ ++ D+G GM EE + Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHAKRVEVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAIS 124 + + R H K S+ + G G + + A+S + + R + Sbjct: 89 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRNGEIYQIAFENGDK 147 Query: 125 GEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 + ++ + V N GT V +F S + + + +++ A+ P V Sbjct: 148 VQDMAVIGTVGKRNTGTSVHFW-------PDESFFDSPRFSVSRLKHLLKAKAVLCPGVE 200 Query: 184 --FTFSTIKSNRYKMNFQSTNGNFPERISQV 212 F + + + E ++ + Sbjct: 201 IVFKDKVNDTEQTWLYQDGLTDYLNEAVNGL 231 >gi|319785549|ref|YP_004145025.1| ATP-binding region ATPase domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171437|gb|ADV14975.1| ATP-binding region ATPase domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 499 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 9/60 (15%) Query: 20 IER-PSIAIKELIENSLD--AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 IER + L+ N++D S + I G +I D G G+ ++E + Sbjct: 376 IERALAN----LVRNAIDHGGGSGTITIAIDENG--GVEIRDEGPGIPADEHENVFEPFY 429 >gi|302390804|ref|YP_003826624.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501] gi|302202881|gb|ADL11559.1| DNA gyrase subunit B [Acetohalobium arabaticum DSM 5501] Length = 639 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 81/246 (32%), Gaps = 28/246 (11%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A +E +I G + + D+G G+ P + Sbjct: 45 VYEVVDNSIDEALAGYCDNIEVIIEPG--NVVTVIDDGRGIPISSHPNLNKPAVEIVMTV 102 Query: 75 -HCTSKISDDFSNIHTFGFRGEALPSIGAVS---HLTLMSRPPQNNTGAQIAISGEKISS 130 H K ++ + + G G + + A+S + +M N Q G + Sbjct: 103 LHAGGKFDNEGYKV-SGGLHGVGVSVVNALSEWLEVEVM---RDNKIYHQRYEEGVPVKD 158 Query: 131 VRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIK 190 + + + + ++ L +S E + ++ +A + + Sbjct: 159 LTVIGESQASGTMIK-----FKPDLEIFESIDFEYKKLIKRLKELAYLNKGIKIEIKDKR 213 Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQF 250 + K + +G + ++ + + ++ E I +N + Sbjct: 214 RDEIKTDIFQYDGGIVSFVQELNENKDPIHEEPIYFETEEEDNHIEVAI-QYNETYVDNI 272 Query: 251 YVFING 256 + F N Sbjct: 273 FTFANN 278 >gi|229065153|ref|ZP_04200446.1| DNA gyrase subunit B [Bacillus cereus AH603] gi|228716182|gb|EEL67901.1| DNA gyrase subunit B [Bacillus cereus AH603] Length = 640 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TD+G G+ Sbjct: 47 EIVDNSIDEALAGYCDEINVSIEED--NSIVVTDDGRGIP 84 >gi|229014660|ref|ZP_04171774.1| DNA gyrase subunit B [Bacillus mycoides DSM 2048] gi|229170197|ref|ZP_04297883.1| DNA gyrase subunit B [Bacillus cereus AH621] gi|228613298|gb|EEK70437.1| DNA gyrase subunit B [Bacillus cereus AH621] gi|228746671|gb|EEL96560.1| DNA gyrase subunit B [Bacillus mycoides DSM 2048] Length = 642 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + +TD+G G+ Sbjct: 49 EIVDNSIDEALAGYCDEINVSIEED--NSIVVTDDGRGIP 86 >gi|300788500|ref|YP_003768791.1| probable chaperone protein [Amycolatopsis mediterranei U32] gi|299798014|gb|ADJ48389.1| probable chaperone protein [Amycolatopsis mediterranei U32] Length = 1249 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 29/107 (27%) Query: 22 RPSIAIKELIENSLDA---------ESSRVETVI---AGGGKSFFQITDNGFGMT----S 65 P++ ++EL++N++DA R I G +F+I D+G GM Sbjct: 495 NPNVFVRELLQNAIDAVRLRNILDIGRRRGTVAISCWEDQGSIWFRIDDDGIGMDLQTIR 554 Query: 66 EEIPMAVQRHCTSKISDDFSN-IHTFGFRGEALPSIGAVSHLTLMSR 111 E + + S +D + + T G + S + +SR Sbjct: 555 EYFLQVGRSYYNS---EDLNRELRTLGR---------SRSRFSAISR 589 >gi|255327016|ref|ZP_05368092.1| sensor histidine kinase MtrB [Rothia mucilaginosa ATCC 25296] gi|255296233|gb|EET75574.1| sensor histidine kinase MtrB [Rothia mucilaginosa ATCC 25296] Length = 583 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 10/85 (11%) Query: 20 IERPSIAIKELIENSLDAESSR-VETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCT 77 IER ++ L+ N+++ SR ++ + + + D+G G++ +E R Sbjct: 435 IER---VLRNLLYNAIEHGESRPIDVYVDANATNLGIAVRDHGIGLSEDEAVQVFNRFW- 490 Query: 78 SKISDDFSNIHTFGFRGEALPSIGA 102 D S T G G L SI A Sbjct: 491 ---RADTSRKRTLGGTGLGL-SIAA 511 >gi|222100717|ref|YP_002535285.1| DNA gyrase subunit B [Thermotoga neapolitana DSM 4359] gi|221573107|gb|ACM23919.1| DNA gyrase subunit B [Thermotoga neapolitana DSM 4359] Length = 636 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ----- 73 + E+++NS+D A ++ + G ++ DNG G+ EE A++ Sbjct: 38 VYEVVDNSVDESLAGYCDWIKVTLHEDG--SVEVEDNGRGIPVDVHPEEGRSALEVVFTV 95 Query: 74 RHCTSKISDDFSNIH 88 H K S D I Sbjct: 96 LHAGGKFSKDSYKIS 110 >gi|153007235|ref|YP_001381560.1| signal transduction histidine kinase NtrB [Anaeromyxobacter sp. Fw109-5] gi|152030808|gb|ABS28576.1| signal transduction histidine kinase, nitrogen specific, NtrB [Anaeromyxobacter sp. Fw109-5] Length = 351 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 22/78 (28%) Query: 21 ERPSIAIKELIENSLDA-----ESSRVETVIAGG----------GKSF----FQITDNGF 61 E+ + + L+ N+LDA + + + G G++ + DNG Sbjct: 235 EKLTQVLLNLVRNALDAVAGRQGA---QIALETGVSSLRLRSASGRTRPLVRLSVQDNGS 291 Query: 62 GMTSEEIPMAVQRHCTSK 79 G+ + TSK Sbjct: 292 GIAEPMLHRLFTPFATSK 309 >gi|19909649|dbj|BAB87020.1| DNA gyrase subunit B [Thermotoga neapolitana DSM 4359] Length = 393 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 15/75 (20%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ----- 73 + E+++NS+D A ++ + G ++ DNG G+ EE A++ Sbjct: 9 VYEVVDNSVDESLAGYCDWIKVTLHEDG--SVEVEDNGRGIPVDVHPEEGRSALEVVFTV 66 Query: 74 RHCTSKISDDFSNIH 88 H K S D I Sbjct: 67 LHAGGKFSKDSYKIS 81 >gi|319780663|ref|YP_004140139.1| ATP-binding region ATPase domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166551|gb|ADV10089.1| ATP-binding region ATPase domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 533 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 9/68 (13%) Query: 13 QIAAGEIIERPSIAIKELIENSLDA--ESSRVETV-IAGGGKSFFQITDNGFGMTSEEIP 69 +I+A E +I + LI+NS A + +V + GGK+ ++D+G G++ Sbjct: 428 RISA----ENAAIVLANLIDNS--ARHGAMQVSVSATSAGGKASILVSDDGAGISPSNRA 481 Query: 70 MAVQRHCT 77 + T Sbjct: 482 RIFEPFFT 489 >gi|315646766|ref|ZP_07899881.1| two-component sensor histidine kinase [Paenibacillus vortex V453] gi|315277696|gb|EFU41020.1| two-component sensor histidine kinase [Paenibacillus vortex V453] Length = 307 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Query: 30 LIENSLDAES--SRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTS 78 LI+N + A S +R++ I+ ++ Q++DNG G++ ++P R S Sbjct: 210 LIQNVI-AHSEGTRIDLQISENEQNVMVQVSDNGKGISPNDLPHIFDRLYQS 260 >gi|312126308|ref|YP_003991182.1| multi-sensor signal transduction histidine kinase [Caldicellulosiruptor hydrothermalis 108] gi|311776327|gb|ADQ05813.1| multi-sensor signal transduction histidine kinase [Caldicellulosiruptor hydrothermalis 108] Length = 566 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 27/94 (28%) Query: 1 MKIRKLSEKIINQIAAGE---IIE----RPSIAIKELIENSLDAESSRVETVIAGGGKS- 52 M+I +K + + E +IE R + LI N++ + GG+ Sbjct: 429 MRIHA-KKKNQKLLCSAEENVVIEADRDRLEQVLINLINNAV--------VYVQEGGQIE 479 Query: 53 ----------FFQITDNGFGMTSEEIPMAVQRHC 76 + DNG G+ +++P +R Sbjct: 480 VGLEKDEEHVKITVKDNGPGIPEDDLPRIFERFY 513 >gi|94497614|ref|ZP_01304183.1| DNA topoisomerase IV, B subunit [Sphingomonas sp. SKA58] gi|94423031|gb|EAT08063.1| DNA topoisomerase IV, B subunit [Sphingomonas sp. SKA58] Length = 658 Score = 45.4 bits (106), Expect = 0.027, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A ++R+E + G + ITDNG G+ + Sbjct: 52 EVLDNSMDEAVAGHATRIEVTLEPG--NRLTITDNGRGIPVD 91 >gi|149280550|ref|ZP_01886667.1| two-component sensor histidine kinase (sensor protein AtoS) [Pedobacter sp. BAL39] gi|149228732|gb|EDM34134.1| two-component sensor histidine kinase (sensor protein AtoS) [Pedobacter sp. BAL39] Length = 1225 Score = 45.4 bits (106), Expect = 0.028, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Query: 30 LIENSLDA-ESS-----RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N+++A ++ ++ +I ++ DNG G+ E + T+K Sbjct: 1132 LLKNAIEARKADMKCLIKINILIDENEV-LVEVEDNGKGIPEAEQEKIFVPNFTTK 1186 >gi|86156795|ref|YP_463580.1| multi-sensor signal transduction histidine kinase [Anaeromyxobacter dehalogenans 2CP-C] gi|85773306|gb|ABC80143.1| multi-sensor signal transduction histidine kinase [Anaeromyxobacter dehalogenans 2CP-C] Length = 507 Score = 45.4 bits (106), Expect = 0.028, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 24/60 (40%), Gaps = 9/60 (15%) Query: 18 EIIERPSIAIKELIENSLDAESSR-VETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRH 75 +++ + N+L + R + + GG++ ++ D G G+ ++ R Sbjct: 380 QVLTNLAS-------NALKYGAGRPITIGLRREGGRAVLRVRDRGIGIPPADLERIFGRF 432 >gi|319936688|ref|ZP_08011101.1| DNA gyrase subunit B [Coprobacillus sp. 29_1] gi|319808245|gb|EFW04810.1| DNA gyrase subunit B [Coprobacillus sp. 29_1] Length = 640 Score = 45.4 bits (106), Expect = 0.028, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + ++ ++ G ++ DNG GM Sbjct: 46 EIVDNSIDEALAGFCNEIKVILEKG--DIVKVIDNGRGMP 83 >gi|255322451|ref|ZP_05363596.1| histidine kinase [Campylobacter showae RM3277] gi|255300359|gb|EET79631.1| histidine kinase [Campylobacter showae RM3277] Length = 324 Score = 45.4 bits (106), Expect = 0.028, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Query: 26 AIKELIENSLDAESSRVETVI--AGGGKSFFQITDNGFGMTSE 66 AI EL++NS DA ++ + I+DNGFGM + Sbjct: 26 AILELVKNSYDACATECKVEFYSRNKELEKIVISDNGFGMNAN 68 >gi|297544311|ref|YP_003676613.1| histidine kinase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842086|gb|ADH60602.1| histidine kinase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 182 Score = 45.4 bits (106), Expect = 0.028, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 3/51 (5%) Query: 30 LIENSLDAESSRVETVIA-GGGKSFFQI--TDNGFGMTSEEIPMAVQRHCT 77 L +NS+ A + + I K ++ D+G GM E + T Sbjct: 11 LSQNSIRAGAKNICIEINIDTSKDMLKVSIEDDGCGMKEELLKKVTDPFVT 61 >gi|163850689|ref|YP_001638732.1| ATPase domain-containing protein [Methylobacterium extorquens PA1] gi|163662294|gb|ABY29661.1| ATP-binding region ATPase domain protein [Methylobacterium extorquens PA1] Length = 626 Score = 45.4 bits (106), Expect = 0.028, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 7/64 (10%) Query: 22 RPSIAIKELIENSLDA-----ESSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRH 75 R S + L+ N+LDA + V G G+ + DNG G+ + + Sbjct: 496 RLSQVLVNLVGNALDAVKGRPGA-EVAVRAWAGEGQVVLSVEDNGPGLDPAALARLFEPF 554 Query: 76 CTSK 79 T+K Sbjct: 555 FTTK 558 >gi|139439853|ref|ZP_01773218.1| Hypothetical protein COLAER_02252 [Collinsella aerofaciens ATCC 25986] gi|133774781|gb|EBA38601.1| Hypothetical protein COLAER_02252 [Collinsella aerofaciens ATCC 25986] Length = 650 Score = 45.4 bits (106), Expect = 0.028, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 6/45 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 E+++NS+D A + ++ + + + DNG G+ +E P Sbjct: 17 EIVDNSVDEAMAGFCTEIQVTVHAD--NSITVVDNGRGIPVDEHP 59 >gi|111306081|gb|AAI21377.1| morc2 protein [Xenopus (Silurana) tropicalis] Length = 561 Score = 45.4 bits (106), Expect = 0.028, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Query: 29 ELIENSLDAESSRVET-VIA----GGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKISDD 83 EL++N+ DA+++R++ + GG + D+G GM E +Q ++K + + Sbjct: 35 ELVDNARDADATRIDIFTVKREELRGGFMLCFL-DDGAGMDPSEAASVIQFGRSAKRTPE 93 Query: 84 FSNIHTFG 91 I +G Sbjct: 94 SIQIGQYG 101 >gi|317123186|ref|YP_004097298.1| DNA gyrase subunit B [Intrasporangium calvum DSM 43043] gi|315587274|gb|ADU46571.1| DNA gyrase subunit B [Intrasporangium calvum DSM 43043] Length = 704 Score = 45.4 bits (106), Expect = 0.028, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + ++ + A GG ++ DNG G+ ++ Sbjct: 60 VYEIVDNSVDEALAGYADTIDITLLADGG---VRVKDNGRGIPTD 101 >gi|307564794|ref|ZP_07627322.1| DNA topoisomerase IV subunit B [Prevotella amnii CRIS 21A-A] gi|307346516|gb|EFN91825.1| DNA topoisomerase IV subunit B [Prevotella amnii CRIS 21A-A] Length = 646 Score = 45.4 bits (106), Expect = 0.028, Method: Composition-based stats. Identities = 46/340 (13%), Positives = 95/340 (27%), Gaps = 41/340 (12%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT-SKI 80 +KE+I+NS+D A +R+E I + D G G+ ++ AV T K Sbjct: 50 LKEVIDNSIDEFKMEAG-NRIEIDIEDN--LRVTVRDYGRGIPQGKLIEAVSMLNTGGKY 106 Query: 81 SDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 + G G AL S + S K Sbjct: 107 DSKAFK-KSVGLNGVGVKAVNALSS-----KFEVKSFRDGKVRHLCFEKGCLKDDKTSKS 160 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF----TFSTIK 190 GT + K+ + ++ ++R ++ + Sbjct: 161 NDENGTFIYFE-------PDNTLFKNYKFLDEIVETMLRNYTYLNTGLTIMYNGRRILSR 213 Query: 191 SNRYKMNFQSTNGNFPERISQVIGED--FINNAVELNEKSNEITLQGYTGIPTFNRGNAN 248 + + + I + GED + + G +A Sbjct: 214 HGLKDLLTDNMTVDPLYPIVHMKGEDIEIAFTHTNQYGEEYYSFVNGQHTTQGGTHQSAF 273 Query: 249 QFYVFINGRTVQDKFILSTIRTAYAETIPLG-RYPVVVLLLEIDPRQVDVNVHPAKSYIR 307 + ++ + K+ IR I + P+ ++ + P I Sbjct: 274 KEHIAKTIKEYYGKYEYIDIRNGLVAAIAINVEEPIFESQTKVKLG--STLMEPNGDTIN 331 Query: 308 FRNPTIIRNFIIQSIQKAINKKGISTSSVLSKKMISSFHQ 347 I +FI ++ ++ + +L K+ + + Sbjct: 332 ----KYIGDFIKLNVDNYLHIHKEDCADILENKIKETERE 367 >gi|78355050|ref|YP_386499.1| DNA gyrase subunit B [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217455|gb|ABB36804.1| DNA gyrase subunit B [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 797 Score = 45.4 bits (106), Expect = 0.028, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 78/246 (31%), Gaps = 31/246 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR-------- 74 + E+++NS+D A +V + + + DNG G+ + P + Sbjct: 44 VYEVVDNSIDEAMAGYCDKVTVKLHLD--NSVTVIDNGRGIPVDIHPKEGRPAVEVVMTV 101 Query: 75 -HCTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQI-AISGEKISSV 131 H K +D + + G G + + A+S L + R + K Sbjct: 102 LHAGGKFDNDSYKV-SGGLHGVGVSCVNALSEYLEVTVRRDGYKYHHRFERGVPVKELER 160 Query: 132 RPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKS 191 GT + R ++ Q +++ +A P + F I Sbjct: 161 VGETDLRGTTIRFR-------PDEEIFETNQFSFDILKKRFEELAYLNPGLEVEF--IDE 211 Query: 192 NRYKMNFQSTNGNFPERISQVI-GEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQF 250 G E + + GE +++ + + +S+ + + +N G Sbjct: 212 RTGDTASFHYEGGIREFVKNLNSGEGGVHSIIFASGESDNVMVDFAL---QYNAGYKENM 268 Query: 251 YVFING 256 F N Sbjct: 269 LTFANN 274 >gi|261407153|ref|YP_003243394.1| integral membrane sensor signal transduction histidine kinase [Paenibacillus sp. Y412MC10] gi|261283616|gb|ACX65587.1| integral membrane sensor signal transduction histidine kinase [Paenibacillus sp. Y412MC10] Length = 623 Score = 45.4 bits (106), Expect = 0.028, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 12/56 (21%) Query: 30 LIENSL-----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAV-----QRH 75 L+ENSL D R+E V+ + +I DNG G++ E+I + +RH Sbjct: 520 LVENSLYHGLDDNG--RIEVVVRKNDRLEIEIRDNGGGISEEKIEALLEQEQTERH 573 >gi|119713193|gb|ABL97261.1| DNA topoisomerase IV subunit B [uncultured marine bacterium EB0_50A10] Length = 631 Score = 45.4 bits (106), Expect = 0.028, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 81/201 (40%), Gaps = 31/201 (15%) Query: 22 RPSIAIKELIENSLD-A---ESSRVETVIAGGGKSFFQITDNGFGMTSE----------E 67 P+ I+E+++NS+D A S ++ + G +++D+G GM + E Sbjct: 32 NPNHLIQEVLDNSVDEALSGHCSNIKIAVLKDG--NIRVSDDGRGMPVDIHPEHKVSGVE 89 Query: 68 IPMAVQRHCTSKISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGE 126 + + + H +K S D N + G G + + A+S L + + + +G Sbjct: 90 LIL-CKLHAGAKFSGDDYN-FSGGLHGVGVSVVNALSENLEVRVK-RDSKEHQITFSNGN 146 Query: 127 KISSVRPVA----MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKV 182 K+S ++ V N GT + + +K+ + +++ A+ P + Sbjct: 147 KVSELKEVGEVGLRNTGTSITFKPNPKYFEDIEVQIKTLK-------HLLKAKAVLCPGL 199 Query: 183 SFTFSTIKSNRYKMNFQSTNG 203 F+ K + K + +G Sbjct: 200 RIEFNNEKKSNDKEKWYFEDG 220 >gi|323494005|ref|ZP_08099121.1| hypothetical protein VIBR0546_17158 [Vibrio brasiliensis LMG 20546] gi|323311632|gb|EGA64780.1| hypothetical protein VIBR0546_17158 [Vibrio brasiliensis LMG 20546] Length = 651 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAESSR----VETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + LI N++DA ++ + +A + + DNG G+ +++IP Sbjct: 543 RLEQVLVNLISNAIDAVENKPEPLIVVSVARVASEVTIAVKDNGKGILADDIPHIFDPFY 602 Query: 77 TSK 79 T K Sbjct: 603 TRK 605 >gi|319405640|emb|CBI79263.1| topoisomerase protein [Bartonella sp. AR 15-3] Length = 692 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 6/45 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 E+I+N++D A + ++ + G + +TDNG G+ E P Sbjct: 89 EIIDNAMDEAVAGYADLIDVSLDSQG--YITVTDNGRGIPIENHP 131 >gi|269217830|ref|ZP_06161684.1| DNA gyrase, B subunit [Actinomyces sp. oral taxon 848 str. F0332] gi|269212765|gb|EEZ79105.1| DNA gyrase, B subunit [Actinomyces sp. oral taxon 848 str. F0332] Length = 693 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 9/55 (16%) Query: 21 ER-PSIAIKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIP 69 ER + E+++NS+D A +E I A GG ++ DNG G+ E P Sbjct: 54 ERGLHHCVYEVVDNSVDEALAGICDHIEVTILADGGL---RVRDNGRGIPVNEHP 105 >gi|240849736|ref|YP_002971124.1| two-component sensor histidine kinase BatS [Bartonella grahamii as4aup] gi|240266859|gb|ACS50447.1| two-component sensor histidine kinase BatS [Bartonella grahamii as4aup] Length = 594 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 5/75 (6%) Query: 22 RPSIAIKELIENS---LDAESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCT 77 R I L+EN+ + ++ + + I DNG G+ SE I +R T Sbjct: 478 RLGQVISNLLENARSFIPRNRGKICITMKSHASTLILTIEDNGPGIRSENIERIFERFYT 537 Query: 78 SKISDDFSNIHT-FG 91 + ++D ++ G Sbjct: 538 DRPNEDAFGQNSGLG 552 >gi|226945657|ref|YP_002800730.1| ATP binding/ATPase domain-containing protein [Azotobacter vinelandii DJ] gi|226720584|gb|ACO79755.1| ATP binding/ATPase (HATPase_c) domain-containing protein [Azotobacter vinelandii DJ] Length = 723 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 6/43 (13%) Query: 26 AIKELIENSLDAESSRVETVIAGGGKS----FFQITDNGFGMT 64 A+ EL++N+ DA++ V + G + D+G GM Sbjct: 37 AVFELVKNAYDADAETVTVTLK--GLRTASPTIVVEDDGDGMA 77 >gi|298245656|ref|ZP_06969462.1| PAS/PAC sensor signal transduction histidine kinase [Ktedonobacter racemifer DSM 44963] gi|297553137|gb|EFH87002.1| PAS/PAC sensor signal transduction histidine kinase [Ktedonobacter racemifer DSM 44963] Length = 737 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 23/50 (46%), Gaps = 5/50 (10%) Query: 30 LIENSL----DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 L++N++ D + V + + ++D G G+ EE+ +R+ Sbjct: 637 LLDNAIKYSPDGGAITVVSELEDL-CVHISVSDQGVGIPPEELEHVFERY 685 >gi|295702247|ref|YP_003595322.1| DNA gyrase subunit B [Bacillus megaterium DSM 319] gi|294799906|gb|ADF36972.1| DNA gyrase, B subunit [Bacillus megaterium DSM 319] Length = 638 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + +I + + DNG G+ Sbjct: 45 EIVDNSIDEALAGYCDEINVIIEKD--NSITVKDNGRGIP 82 >gi|225420388|ref|ZP_03762691.1| hypothetical protein CLOSTASPAR_06733 [Clostridium asparagiforme DSM 15981] gi|225040965|gb|EEG51211.1| hypothetical protein CLOSTASPAR_06733 [Clostridium asparagiforme DSM 15981] Length = 605 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 7/52 (13%) Query: 30 LIENSL-----D-AESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQR 74 LIENS+ D A S ++ I G + DNG GM E + +R Sbjct: 486 LIENSIYHGIRDKAGHSTIKIKIDSRDGWVAITVLDNGLGMDRERLEQLKKR 537 >gi|144898434|emb|CAM75298.1| PAS [Magnetospirillum gryphiswaldense MSR-1] Length = 957 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 11/83 (13%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLDA-------ESSRVETVIAGGGKSFF-QI 56 +L E + I G +E + L+ N+ DA R+ + G + Sbjct: 522 QLPESCPDLIGRGNQLE---QVVVALLTNARDAVCARHKPGKRRISLSLEQRGDDLILSV 578 Query: 57 TDNGFGMTSEEIPMAVQRHCTSK 79 DNG G+ + T+K Sbjct: 579 EDNGGGIPDDLWSRVFTPFFTTK 601 >gi|18977951|ref|NP_579308.1| DNA topoisomerase VI subunit B [Pyrococcus furiosus DSM 3638] gi|23822280|sp|Q8U0K8|TOP6B_PYRFU RecName: Full=Type 2 DNA topoisomerase 6 subunit B; AltName: Full=Type II DNA topoisomerase VI subunit B; Short=TopoVI-B gi|18893723|gb|AAL81703.1| DNA topoisomerase VI, subunit b [Pyrococcus furiosus DSM 3638] Length = 568 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 7/60 (11%) Query: 20 IERPSIAIKELIENSLDA--ESSR---VETVIAGGGKS--FFQITDNGFGMTSEEIPMAV 72 I + I E + NSLDA E+ V I GK + DNG G+ + IP Sbjct: 33 IRSLTTVIHEAVTNSLDACEEAGILPYVRVEIEELGKEHYKVIVEDNGPGIPEDYIPHVF 92 >gi|325298759|ref|YP_004258676.1| integral membrane sensor signal transduction histidine kinase [Bacteroides salanitronis DSM 18170] gi|324318312|gb|ADY36203.1| integral membrane sensor signal transduction histidine kinase [Bacteroides salanitronis DSM 18170] Length = 462 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 30 LIENSLD--AESSRVETVIAG-GGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 L+EN++ + + + G ++ +++DNG G+ ++E+ ++ S Sbjct: 364 LLENAVKYARGEAVITITLRQTGNRTDIEVSDNGRGIPADELKHIFEKFYRS 415 >gi|319654425|ref|ZP_08008512.1| hypothetical protein HMPREF1013_05132 [Bacillus sp. 2_A_57_CT2] gi|317393924|gb|EFV74675.1| hypothetical protein HMPREF1013_05132 [Bacillus sp. 2_A_57_CT2] Length = 465 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 9/82 (10%) Query: 21 ERPSIAIKELIENSLD---AESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHC 76 R I L++N++ + + + K + ++ DNG G+ E++P + R Sbjct: 348 TRLEQIIFNLLDNAIKYSPPGAKTI-LSVNNKKKDVYIKVRDNGKGIPEEDLPYILNRFY 406 Query: 77 TSKISDDFSNIHTFGFRGEALP 98 D S + G G L Sbjct: 407 ----RVDKSRTRSLGGTGLGLA 424 >gi|312794584|ref|YP_004027507.1| multi-sensor signal transduction histidine kinase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181724|gb|ADQ41894.1| multi-sensor signal transduction histidine kinase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 565 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 27/94 (28%) Query: 1 MKIRKLSEKIINQIAAGE---IIE----RPSIAIKELIENSLDAESSRVETVIAGGGKS- 52 M+I +K + + + +IE R + LI N++ + GG+ Sbjct: 429 MRIHA-KKKNQKLLCSTQENVVIEADRDRLEQVLINLINNAV--------VYVQEGGQIE 479 Query: 53 ----------FFQITDNGFGMTSEEIPMAVQRHC 76 + DNG G+ E++P +R Sbjct: 480 VGLEKDEEHVRITVKDNGPGIPEEDLPRIFERFY 513 >gi|294496880|ref|YP_003560580.1| DNA gyrase subunit B [Bacillus megaterium QM B1551] gi|294346817|gb|ADE67146.1| DNA gyrase, B subunit [Bacillus megaterium QM B1551] Length = 638 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + +I + + DNG G+ Sbjct: 45 EIVDNSIDEALAGYCDEINVIIEKD--NSITVKDNGRGIP 82 >gi|258650278|ref|YP_003199434.1| DNA gyrasesubunit B [Nakamurella multipartita DSM 44233] gi|258553503|gb|ACV76445.1| DNA gyrase, B subunit [Nakamurella multipartita DSM 44233] Length = 670 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 27/137 (19%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMTSE----------EIPMA 71 ++E+++NS+D A + RVE ++ GG + DNG G+ E E+ + Sbjct: 42 VQEVVDNSVDEAMAGYADRVEVILRADGG---VTVIDNGRGIPVEMHPKEKKPTVEVVLT 98 Query: 72 VQRHCTSKISDDFSNIHTFGFRGEALPSIGAVS---HLTLMSRPPQNNTGAQIAISGEKI 128 V H K D + + G G + + A+S + + ++ + + K Sbjct: 99 VL-HAGGKFDSDSYAV-SGGLHGVGVSVVNALSTRLDVEI----HRDGHAYRQSYRYAKP 152 Query: 129 SSVRPVAMNPGTIVEVR 145 + + + T V Sbjct: 153 GPLETIGPSSRTGSSVT 169 >gi|227873174|ref|ZP_03991465.1| DNA topoisomerase (ATP-hydrolyzing) [Oribacterium sinus F0268] gi|227841005|gb|EEJ51344.1| DNA topoisomerase (ATP-hydrolyzing) [Oribacterium sinus F0268] Length = 654 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + + I + + DNG G+ + Sbjct: 56 VYEIVDNSVDEALAGFCNTITVKIHQN--NSITVRDNGRGIPVD 97 >gi|229542310|ref|ZP_04431370.1| DNA gyrase, B subunit [Bacillus coagulans 36D1] gi|229326730|gb|EEN92405.1| DNA gyrase, B subunit [Bacillus coagulans 36D1] Length = 641 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + I + + DNG G+ Sbjct: 47 EIVDNSIDEALAGFCDEINVFIEKD--NSITVKDNGRGIP 84 >gi|298208510|ref|YP_003716689.1| DNA topoisomerase IV subunit B [Croceibacter atlanticus HTCC2559] gi|83848433|gb|EAP86302.1| DNA topoisomerase IV subunit B [Croceibacter atlanticus HTCC2559] Length = 618 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 33/245 (13%), Positives = 75/245 (30%), Gaps = 37/245 (15%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT---- 77 +KE+++NS+D A +E I G + D G G+ ++ V + T Sbjct: 46 LKEVLDNSIDEFVMNAG-KTIEISIQG---ERVIVRDYGRGIPLGKVKDVVSKMNTGGKY 101 Query: 78 -SKI---SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRP 133 SK S + + T A+ ++ + + SR ++ + + + Sbjct: 102 DSKAFKKSVGLNGVGTK-----AVNALSSYFRVE-SSRDGKSASAEFAQGNLTDEEFLDE 155 Query: 134 VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF-----TFST 188 + GT V K+ + + + +++ P ++ F + Sbjct: 156 TSRRRGTKVT-------FIPDEAIFKNYKYRSEYVAKMLKNYVYLNPGLTIVFNGERFYS 208 Query: 189 IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNAN 248 + ++ + I + G+D + +E G Sbjct: 209 ENGLKDLLSDTIREDDRLYPIIHLKGDDIEVAITHSKTQYSEEYHSFVNG--QHTTQGGT 266 Query: 249 QFYVF 253 F Sbjct: 267 HQSAF 271 >gi|330996821|ref|ZP_08320690.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Paraprevotella xylaniphila YIT 11841] gi|329572264|gb|EGG53923.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Paraprevotella xylaniphila YIT 11841] Length = 655 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 63/222 (28%), Gaps = 32/222 (14%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT-SKI 80 +KE+I+NS+D A R+E + + D G G+ ++ AV T K Sbjct: 55 LKEVIDNSIDEFKMNAG-RRIEITVEDN--LRVSVRDYGRGIPLGKLIEAVSMLNTGGKY 111 Query: 81 SDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 + G G AL S H + S A S P Sbjct: 112 DSKAFK-KSVGLNGVGVKAVNALSS-----HFEVRSHRDGEMRRATFERGILTSESTEPT 165 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF----TFSTIK 190 A GT + K+ T I ++R ++ + Sbjct: 166 ADENGTFIYFE-------PDCALFKNYTFRTEFIETMLRNYTYLNTGLTIMFNGRRIHSR 218 Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEIT 232 + + + + I + GED + E Sbjct: 219 NGLVDLLNDNMTNDGLYPIIHLKGEDIEIAFTHTGQYGEEYY 260 >gi|319780214|ref|YP_004139690.1| ATP-binding region ATPase domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166102|gb|ADV09640.1| ATP-binding region ATPase domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 594 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 15/67 (22%) Query: 17 GEIIERPSIAIKELIENSL-----DAESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPM 70 G++I LIEN+ D + +A GK + DNG G+ ++ I Sbjct: 481 GQVITN-------LIENARSFVPEDHG--HISLSLARAGKFNIVTVDDNGPGIRADNIDR 531 Query: 71 AVQRHCT 77 +R T Sbjct: 532 IFERFYT 538 >gi|302870793|ref|YP_003839429.1| multi-sensor signal transduction histidine kinase [Caldicellulosiruptor obsidiansis OB47] gi|302573652|gb|ADL41443.1| multi-sensor signal transduction histidine kinase [Caldicellulosiruptor obsidiansis OB47] Length = 566 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 15/88 (17%) Query: 1 MKIRKLSEKIINQIAAGE---IIE----RPSIAIKELIENSL----DAESSRVETVIA-G 48 M+I +K + + E +IE R + LI N++ + ++E + Sbjct: 429 MRIHA-KKKNQKLLCSAEENVVIEADRDRLEQVLINLINNAVVYVQEGG--QIEVGLKKD 485 Query: 49 GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 G + DNG G+ +++P +R Sbjct: 486 GSYVKITVDDNGPGIPEDDLPRIFERFY 513 >gi|223928101|gb|ACN23816.1| osmosensitive K+ channel histidine kinase [Clostridium sp. enrichment culture clone 7-14] Length = 468 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 7/52 (13%) Query: 30 LIENSL----DAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ D +V + GG++ + DNG G+ E++P QR Sbjct: 363 LVDNAVKYSHDGG--QVWISLHREGGQAVLAVADNGVGIPQEDLPRIFQRFY 412 >gi|224075523|ref|XP_002304665.1| predicted protein [Populus trichocarpa] gi|222842097|gb|EEE79644.1| predicted protein [Populus trichocarpa] Length = 419 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 6/57 (10%) Query: 29 ELIENSLDA---ESSRVETVIAGGGKSF---FQITDNGFGMTSEEIPMAVQRHCTSK 79 EL++N++D +S V + K F + DNG GMT + + + ++K Sbjct: 24 ELLDNAVDEVGHGASCVSIDVLNNSKDFSKMLLVEDNGGGMTPDRMRACMSLGYSAK 80 >gi|238793656|ref|ZP_04637279.1| DNA topoisomerase 4 subunit B [Yersinia intermedia ATCC 29909] gi|238727071|gb|EEQ18602.1| DNA topoisomerase 4 subunit B [Yersinia intermedia ATCC 29909] Length = 631 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 72/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + R++ ++ ++TD+G GM EE + Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHARRIDVILHAD--QSLEVTDDGRGMPVDIHPEEGVPAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 89 ELIMCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDSQIYSIAFENGDK 147 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--F 184 + ++F S + + ++ +++ A+ P V F Sbjct: 148 VQELQVIGTCGKRNTGTSVHFW----PDVSFFDSPRFSVSRLSHLLKAKAVLCPGVEIVF 203 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 + + E ++ + Sbjct: 204 KDQVNNTEQRWCYADGLTDYLMEAVNGL 231 >gi|94985015|ref|YP_604379.1| histidine kinase [Deinococcus geothermalis DSM 11300] gi|94555296|gb|ABF45210.1| histidine kinase [Deinococcus geothermalis DSM 11300] Length = 388 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 42 VETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 ++ + G G+++ Q+ D+G G+ +E++P S+++ Sbjct: 291 IQVRVWQGEGETYVQVRDDGEGIPAEDLPHLFAAFEQSRLT 331 >gi|332520465|ref|ZP_08396927.1| DNA topoisomerase type IIA subunit B region 2 domain protein [Lacinutrix algicola 5H-3-7-4] gi|332043818|gb|EGI80013.1| DNA topoisomerase type IIA subunit B region 2 domain protein [Lacinutrix algicola 5H-3-7-4] Length = 619 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 76/232 (32%), Gaps = 35/232 (15%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT---- 77 +KE+++NS+D A +E + G + D G G+ ++ V + T Sbjct: 46 LKEVLDNSIDEFVMGAG-KTIEISVQ--GSKVI-VRDYGRGIPLGKVVDVVSKMNTGGKY 101 Query: 78 -SKI---SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRP 133 SK S + + T A+ ++ + + SR ++ + + + Sbjct: 102 DSKAFKKSVGLNGVGTK-----AVNALSSYFRVE-SSRDGKSASADFEQGNLVDEEFLEE 155 Query: 134 VAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF-----TFST 188 + GT V K+ + + + +++ P ++ + + Sbjct: 156 TSRRKGTKVS-------FIPDEIIFKNYKFRSEYVVKMLKNYVYLNPGLTIVFNGEKYYS 208 Query: 189 IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIP 240 + + ++T + I + G+D + +E G Sbjct: 209 ENGLKDLLAEKTTETDLLYPIIHLRGDDIEVALTHSKTQYSEEYNSFVNGQN 260 >gi|228903284|ref|ZP_04067415.1| Sensor histidine kinase [Bacillus thuringiensis IBL 4222] gi|228967885|ref|ZP_04128896.1| Sensor histidine kinase [Bacillus thuringiensis serovar sotto str. T04001] gi|228791752|gb|EEM39343.1| Sensor histidine kinase [Bacillus thuringiensis serovar sotto str. T04001] gi|228856245|gb|EEN00774.1| Sensor histidine kinase [Bacillus thuringiensis IBL 4222] Length = 392 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 300 LIKNAIEAMSVGGTITIKVTVKEG--IIVQVKDEGCGIPKDKIPKLNEAFYTTK 351 >gi|227549441|ref|ZP_03979490.1| DNA gyrase subunit B [Corynebacterium lipophiloflavum DSM 44291] gi|227078518|gb|EEI16481.1| DNA gyrase subunit B [Corynebacterium lipophiloflavum DSM 44291] Length = 662 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + RV+ + A GG ++ DNG G+ E Sbjct: 17 EVVDNSVDEAMAGYADRVDVTLLADGG---IEVIDNGRGIPVE 56 >gi|55377342|ref|YP_135192.1| DNA gyrase subunit B [Haloarcula marismortui ATCC 43049] gi|55230067|gb|AAV45486.1| DNA gyrase subunit B [Haloarcula marismortui ATCC 43049] Length = 642 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A ++ I G ++D+G G+ + Sbjct: 42 VYEVVDNAIDEALAGYCDNIDVTIHDDG--SVSVSDDGRGIPVD 83 >gi|75760788|ref|ZP_00740807.1| Sporulation kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218899933|ref|YP_002448344.1| sporulation kinase [Bacillus cereus G9842] gi|74491725|gb|EAO54922.1| Sporulation kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218542352|gb|ACK94746.1| sporulation kinase [Bacillus cereus G9842] Length = 406 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 6/54 (11%) Query: 30 LIENSLDA---ESS-RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+++A + ++ + G Q+ D G G+ ++IP + T+K Sbjct: 314 LIKNAIEAMSVGGTITIKVTVKEG--IIVQVKDEGCGIPKDKIPKLNEAFYTTK 365 >gi|163847236|ref|YP_001635280.1| ATPase domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222525077|ref|YP_002569548.1| putative anti-sigma regulatory factor, serine/threonine protein kinase [Chloroflexus sp. Y-400-fl] gi|163668525|gb|ABY34891.1| ATP-binding region ATPase domain protein [Chloroflexus aurantiacus J-10-fl] gi|222448956|gb|ACM53222.1| putative anti-sigma regulatory factor, serine/threonine protein kinase [Chloroflexus sp. Y-400-fl] Length = 142 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 9/64 (14%) Query: 15 AAG---EIIERPSIAIKELIENSLDAE-----SSRVETVIAGGGKSF-FQITDNGFGMTS 65 AAG E +E +A+ E + N++D + V G+ +++D G G+ Sbjct: 28 AAGFSPEQVEDLKLAVSEAVNNAIDHGNRGDVAKLVAVTFEIDGEKLEIRVSDQGGGIER 87 Query: 66 EEIP 69 ++ Sbjct: 88 IDVS 91 >gi|303236740|ref|ZP_07323319.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Prevotella disiens FB035-09AN] gi|302482908|gb|EFL45924.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Prevotella disiens FB035-09AN] Length = 402 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 30 LIENSLDA---ESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTSK 79 L +N++DA E+ + + + +++D G G+ +++ + T+K Sbjct: 300 LCKNAVDAMGGEAGTITLKVETYNQQAIIEVSDTGKGIKRKDLRNVFRPGFTTK 353 >gi|297564812|ref|YP_003683784.1| DNA gyrase subunit B [Meiothermus silvanus DSM 9946] gi|296849261|gb|ADH62276.1| DNA gyrase, B subunit [Meiothermus silvanus DSM 9946] Length = 645 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 6/43 (13%) Query: 28 KELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 KE+++NS+D A ++ + T + G + DNG G+ + Sbjct: 44 KEILDNSVDEALAGYATEIITTLHPDG--SITVEDNGRGIPVD 84 >gi|207727770|ref|YP_002256164.1| c4-dicarboxylate transport sensor kinase protein [Ralstonia solanacearum MolK2] gi|206591011|emb|CAQ56623.1| c4-dicarboxylate transport sensor kinase protein [Ralstonia solanacearum MolK2] Length = 665 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 11/61 (18%) Query: 30 LIENSLDAES-------SRVETVI---AGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTS 78 LI N+LDA + R++ I G + DNG G++++ +P + T+ Sbjct: 554 LIGNALDAIAANDLSRPGRIDIDIGPADGAPAQLCIVVRDNGPGISADAMPHLFEPFFTT 613 Query: 79 K 79 K Sbjct: 614 K 614 >gi|126666428|ref|ZP_01737407.1| sensor histidine kinase [Marinobacter sp. ELB17] gi|126629229|gb|EAZ99847.1| sensor histidine kinase [Marinobacter sp. ELB17] Length = 572 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 8/58 (13%) Query: 30 LIENSLDA-----ESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 L+ N++ A RV + G + + ++DNG G+TSE + + T+KI+ Sbjct: 475 LVMNAIQALEGMGG--RVTIRVKQHGLAVYISVSDNGPGVTSEHLSHLTEPFFTTKIN 530 >gi|94967039|ref|YP_589087.1| DNA gyrase subunit B [Candidatus Koribacter versatilis Ellin345] gi|94549089|gb|ABF39013.1| DNA gyrase subunit B [Candidatus Koribacter versatilis Ellin345] Length = 879 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 26/48 (54%), Gaps = 6/48 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 + E+++NS+D A + R++ I + + DNG G+ + ++ + Sbjct: 68 VYEVVDNSVDEALAGHADRIDVTIHID--NSITVIDNGRGIPTGDMDI 113 >gi|237756786|ref|ZP_04585277.1| alkaline phosphatase synthesis sensor protein PhoR [Sulfurihydrogenibium yellowstonense SS-5] gi|237691052|gb|EEP60169.1| alkaline phosphatase synthesis sensor protein PhoR [Sulfurihydrogenibium yellowstonense SS-5] Length = 337 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 23 PSIAIKELIENSLDAESSR--VETVIAGGGK-SFFQITDNGFGMTSEEIPMAVQRHC 76 SIA+K LIEN++ VE GK + D G G+ E IP+ +R Sbjct: 231 LSIALKNLIENAIKYNVQNGIVEVNAKTDGKYDTISVIDTGIGIPPESIPLVFERFY 287 >gi|98991100|gb|ABF60568.1| DNA gyrase subunit B [Spiroplasma phoeniceum] Length = 557 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +++++ +I + DNG G+ E Sbjct: 13 EIVDNSIDEVLANFANKIKIIINKD--ESITVVDNGRGIPIE 52 >gi|98991102|gb|ABF60569.1| DNA gyrase subunit B [Spiroplasma phoeniceum] gi|98991104|gb|ABF60570.1| DNA gyrase subunit B [Spiroplasma phoeniceum] Length = 557 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A +++++ +I + DNG G+ E Sbjct: 13 EIVDNSIDEVLANFANKIKIIINKD--ESITVVDNGRGIPIE 52 >gi|121598478|ref|YP_991553.1| Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Burkholderia mallei SAVP1] gi|124384225|ref|YP_001027374.1| putative C4-dicarboxylate transport sensor protein [Burkholderia mallei NCTC 10229] gi|121227288|gb|ABM49806.1| Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Burkholderia mallei SAVP1] Length = 289 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 22 RPSIAIKELIENSLDA-ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 R + L+ N++ A + R++ I + + DNG G+ E + + T+K Sbjct: 176 RLEQVLINLLGNAVAAVAAPRIDVAIDATAATLAITVRDNGPGIAPESLARLFEPFFTTK 235 >gi|15639990|ref|NP_219443.1| DNA gyrase, subunit B (gyrB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189026229|ref|YP_001934001.1| DNA gyrase, subunit B [Treponema pallidum subsp. pallidum SS14] gi|3913790|sp|O08399|GYRB_TREPA RecName: Full=DNA gyrase subunit B gi|2102700|gb|AAB66715.1| DNA gyrase subunit B [Treponema pallidum] gi|3323330|gb|AAC65954.1| DNA gyrase, subunit B (gyrB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018804|gb|ACD71422.1| DNA gyrase, subunit B [Treponema pallidum subsp. pallidum SS14] gi|291060363|gb|ADD73098.1| DNA gyrase, B subunit [Treponema pallidum subsp. pallidum str. Chicago] Length = 637 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N +D A R+ V+ G + ++ DNG G+ + Sbjct: 39 VYEVVDNCIDEAMAGYCDRITVVLEQG--NVVRVEDNGRGIPVD 80 >gi|89070780|ref|ZP_01158033.1| DNA topoisomerase IV subunit B [Oceanicola granulosus HTCC2516] gi|89043622|gb|EAR49829.1| DNA topoisomerase IV subunit B [Oceanicola granulosus HTCC2516] Length = 652 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 6/48 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 + E+++NS+D A ++R+E + I DNG GM EE P Sbjct: 48 VAEVLDNSMDEAVAGHANRIEVELHDD--HAITIRDNGRGMPFEEHPK 93 >gi|312113758|ref|YP_004011354.1| PAS/PAC sensor signal transduction histidine kinase [Rhodomicrobium vannielii ATCC 17100] gi|311218887|gb|ADP70255.1| PAS/PAC sensor signal transduction histidine kinase [Rhodomicrobium vannielii ATCC 17100] Length = 470 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Query: 30 LIENSLDA--ESSR--VETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 LI+N+LDA +E GG ++ D+G G+ + + + T+K Sbjct: 368 LIQNALDAMDGDPHPLIEIDATEDGGFVALRVRDHGPGIAPDGMQKLFEPFFTTK 422 >gi|241665471|ref|YP_002983830.1| histidine kinase [Ralstonia pickettii 12D] gi|240867498|gb|ACS65158.1| histidine kinase [Ralstonia pickettii 12D] Length = 615 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 8/66 (12%) Query: 22 RPSIAIKELIENSLDAESSR-------VETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQ 73 R + LI N++DA + V + K + D G G+ ++ +P + Sbjct: 501 RLEQVLVNLIRNAIDASAETPQPRSATVHVSVEPVEKWVRITVRDFGPGIPADVLPRLFE 560 Query: 74 RHCTSK 79 T+K Sbjct: 561 PFFTTK 566 >gi|196233457|ref|ZP_03132300.1| multi-sensor signal transduction histidine kinase [Chthoniobacter flavus Ellin428] gi|196222453|gb|EDY16980.1| multi-sensor signal transduction histidine kinase [Chthoniobacter flavus Ellin428] Length = 721 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 9/63 (14%) Query: 30 LIENSLDAESS--RVETVIAGGGKS-------FFQITDNGFGMTSEEIPMAVQRHCTSKI 80 LI NS+DA S ++ + KS ++ D G G+ E + + + T+K Sbjct: 603 LISNSIDASPSGSQIRVQLERLAKSDVNREWWRVRVIDQGEGIPKENLTRILTPYFTTKN 662 Query: 81 SDD 83 D Sbjct: 663 RGD 665 >gi|218780092|ref|YP_002431410.1| histidine kinase [Desulfatibacillum alkenivorans AK-01] gi|218761476|gb|ACL03942.1| histidine kinase [Desulfatibacillum alkenivorans AK-01] Length = 593 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 14/84 (16%) Query: 4 RKLSEKIINQIAAGEIIERPS---IAIKELIENSLDA----ESSRVETVIAGG-GKSFFQ 55 + L + + N I A PS + LI N++DA + V G G Sbjct: 460 QVLDDNL-NLIQA-----SPSELQQVLLNLINNAIDAIDHKQGGEVTISTENGDGVVNIH 513 Query: 56 ITDNGFGMTSEEIPMAVQRHCTSK 79 + D G G+ + T+K Sbjct: 514 VADTGQGIPDAVLKRVFDPFFTTK 537 >gi|187925986|ref|YP_001892331.1| integral membrane sensor signal transduction histidine kinase [Ralstonia pickettii 12J] gi|187727740|gb|ACD28904.1| integral membrane sensor signal transduction histidine kinase [Ralstonia pickettii 12J] Length = 635 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 8/66 (12%) Query: 22 RPSIAIKELIENSLDAESSR-------VETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQ 73 R + LI N++DA + V + K + D G G+ ++ +P + Sbjct: 521 RLEQVLVNLIRNAIDASAETPQPRSATVHVSVEPVEKWVRITVRDFGPGIPADVLPRLFE 580 Query: 74 RHCTSK 79 T+K Sbjct: 581 PFFTTK 586 >gi|38233004|ref|NP_938771.1| putative two component system sensor kinase [Corynebacterium diphtheriae NCTC 13129] gi|38199263|emb|CAE48894.1| Putative two component system sensor kinase [Corynebacterium diphtheriae] Length = 384 Score = 45.4 bits (106), Expect = 0.030, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 21/118 (17%) Query: 23 PSIAIKELIENSLD--------AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 A+ LI N+++ + ++++ G+ ++ DNG G++ E +R Sbjct: 265 LVTAVSNLISNAINYSPQGMPISVATKIS----RDGRVLIRVIDNGIGISVENQKRVFER 320 Query: 75 HCTSKISDDFSNIHTFGFRGEALPSIGAVS-----HLTLMSRPPQNNTGAQIAISGEK 127 D + + G G L + V+ +TL SRP +T + Sbjct: 321 F----FRVDKARSRSTGGTGLGLAIVKHVAANHGGDVTLWSRPGTGSTFTIELPIYHE 374 >gi|284010225|dbj|BAI66712.1| DNA gyrase B [Borrelia turcica] Length = 625 Score = 45.0 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A ++E VI + ++DNG G+ ++ Sbjct: 28 VYEVVDNSIDEALAGFCDKIEIVINSD--NSITVSDNGRGIPTD 69 >gi|190710563|gb|ACE95112.1| gyrase subunit B [Bacillus thuringiensis serovar entomocidus] Length = 627 Score = 45.0 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N +D A + I + ++TDNG G+ Sbjct: 40 EIVDNCIDEALAGYCDEINVSIEED--NSIRVTDNGRGIP 77 >gi|329944241|ref|ZP_08292500.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Actinomyces sp. oral taxon 170 str. F0386] gi|328530971|gb|EGF57827.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Actinomyces sp. oral taxon 170 str. F0386] Length = 358 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 22 RPSIAIKELIENSL--DAESSRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRH 75 + + +IENSL A ++ V A GG + F I D G G+ + P +RH Sbjct: 236 SLAQVLATVIENSLRYGAGATSVSVRSASGGHAVFIDIADEGEGVAEDIAPHVFERH 292 >gi|317049581|ref|YP_004117229.1| DNA topoisomerase IV subunit B [Pantoea sp. At-9b] gi|316951198|gb|ADU70673.1| DNA topoisomerase IV, B subunit [Pantoea sp. At-9b] Length = 631 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 77/211 (36%), Gaps = 29/211 (13%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + RVE ++ ++ D+G GM EE + Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHAKRVEVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAIS 124 + + R H K S+ + G G + + A+S + + R + + Sbjct: 89 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRNGEVYDIAFENGEK 147 Query: 125 GEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 + + V N GT V +F S + + ++ +++ A+ P V Sbjct: 148 VQDLHVTGTVAKRNTGTSVHFW-------PDESFFDSPRFSVSRLSHLLKAKAVLCPGVE 200 Query: 184 --FTFSTIKSNRYKMNFQSTNGNFPERISQV 212 F + + E ++ + Sbjct: 201 IVFKDQVNNTEQRWCYQDGLTDYLCEAVNGL 231 >gi|203366781|gb|ACH98383.1| DNA gyrase B subunit [Geitlerinema sp. PCC 7105] Length = 374 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + +E I G +TD+G G+ +E Sbjct: 1 VYEVVDNSVDEALAGYCTHIEIDINADG--SVSVTDDGRGIPTE 42 >gi|239827569|ref|YP_002950193.1| PAS/PAC sensor signal transduction histidine kinase [Geobacillus sp. WCH70] gi|239807862|gb|ACS24927.1| PAS/PAC sensor signal transduction histidine kinase [Geobacillus sp. WCH70] Length = 597 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 5/60 (8%) Query: 21 ERPSIAIKELIENSL---DAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 +R + LI+N++ D V+ ++ G + D+G G+ E++P +R Sbjct: 485 DRIEQVLTNLIDNAIRHTDKN-GMVKIIVERSGDGVTIHVQDSGSGIPEEDLPFVFERFY 543 >gi|163753370|ref|ZP_02160494.1| two-component sensor histidine kinase, phosphate regulation [Kordia algicida OT-1] gi|161327102|gb|EDP98427.1| two-component sensor histidine kinase, phosphate regulation [Kordia algicida OT-1] Length = 347 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 8/62 (12%) Query: 21 ERPSIAIKELIENSL----DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 ER + LI NS+ D ++ + I K ++TDNG G+ +E I +R Sbjct: 237 ERIQQVLTNLIVNSIKYGRDNGTTEISVENLIRN--KVIVRVTDNGEGIETENIARLFER 294 Query: 75 HC 76 Sbjct: 295 FY 296 >gi|153814924|ref|ZP_01967592.1| hypothetical protein RUMTOR_01139 [Ruminococcus torques ATCC 27756] gi|317500436|ref|ZP_07958660.1| DNA gyrase, subunit B [Lachnospiraceae bacterium 8_1_57FAA] gi|331089557|ref|ZP_08338456.1| hypothetical protein HMPREF1025_02039 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847955|gb|EDK24873.1| hypothetical protein RUMTOR_01139 [Ruminococcus torques ATCC 27756] gi|316898191|gb|EFV20238.1| DNA gyrase, subunit B [Lachnospiraceae bacterium 8_1_57FAA] gi|330404925|gb|EGG84463.1| hypothetical protein HMPREF1025_02039 [Lachnospiraceae bacterium 3_1_46FAA] Length = 640 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + V+ G + +TDNG G+ + Sbjct: 43 EIVDNSVDEHLAGFCTEIRVVLEKDGTA--TVTDNGRGIPVD 82 >gi|50086499|ref|YP_048009.1| DNA topoisomerase IV subunit B [Acinetobacter sp. ADP1] gi|49532475|emb|CAG70187.1| topoisomerase IV subunit B [Acinetobacter sp. ADP1] Length = 626 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+N++D A ++++ + G + DNG GM + Sbjct: 29 TRPNHLAQEVIDNAVDEALAGHANKIRVTVYQDG--SLAVEDNGRGMPVD 76 >gi|325916059|ref|ZP_08178349.1| DNA topoisomerase IV subunit B [Xanthomonas vesicatoria ATCC 35937] gi|325537735|gb|EGD09441.1| DNA topoisomerase IV subunit B [Xanthomonas vesicatoria ATCC 35937] Length = 629 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + +VE + G +++D+G GM EE + Sbjct: 31 RPNHLAQEVIDNSVDEALAGHAKQVEVTLYKDG--SCEVSDDGRGMPVDMHPEEKIPGVE 88 Query: 70 MAVQR-HCTSKISD 82 + + R H K ++ Sbjct: 89 LILTRLHAGGKFNN 102 >gi|323141628|ref|ZP_08076510.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Phascolarctobacterium sp. YIT 12067] gi|322413893|gb|EFY04730.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Phascolarctobacterium sp. YIT 12067] Length = 183 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 32 ENSLDAESSRVETVIAGG--GKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 +NS+ A + + ++ G F + D+G GM SE + TS Sbjct: 13 QNSVAAGARHIWLTVSENEQGYFVFSVRDDGKGMDSEMLQRVCDPFVTS 61 >gi|289669614|ref|ZP_06490689.1| DNA topoisomerase IV subunit B [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 562 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + +VE + G +++D+G GM EE + Sbjct: 31 RPNHLAQEVIDNSVDEALAGHAKQVEVTLYKDG--SCEVSDDGRGMPVDIHPEEKIPGVE 88 Query: 70 MAVQR-HCTSKISD 82 + + R H K ++ Sbjct: 89 LILTRLHAGGKFNN 102 >gi|289662651|ref|ZP_06484232.1| DNA topoisomerase IV subunit B [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 629 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + +VE + G +++D+G GM EE + Sbjct: 31 RPNHLAQEVIDNSVDEALAGHAKQVEVTLYKDG--SCEVSDDGRGMPVDIHPEEKIPGVE 88 Query: 70 MAVQR-HCTSKISD 82 + + R H K ++ Sbjct: 89 LILTRLHAGGKFNN 102 >gi|238762440|ref|ZP_04623411.1| DNA topoisomerase 4 subunit B [Yersinia kristensenii ATCC 33638] gi|238699425|gb|EEP92171.1| DNA topoisomerase 4 subunit B [Yersinia kristensenii ATCC 33638] Length = 631 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 71/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + R++ ++ ++ D+G GM EE + Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHARRIDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 89 ELIMCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDSQIYSIAFENGDK 147 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--F 184 + ++F S + + ++ +++ A+ P V F Sbjct: 148 VQDLQVIGTCGKRNTGTSVHFW----PDVSFFDSPRFSVSRLSHLLKAKAVLCPGVEIVF 203 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 + + E ++ + Sbjct: 204 KDQVNNTEQRWCYADGLTDYLMEAVNGL 231 >gi|203366790|gb|ACH98386.1| DNA gyrase B subunit [Geitlerinema sp. Flo1] Length = 370 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 6/40 (15%) Query: 31 IENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 ++NS+D A + +E I G +TD+G G+ +E Sbjct: 1 VDNSIDEALAGYCTHIEIDINADG--SVSVTDDGRGIPTE 38 >gi|160946608|ref|ZP_02093811.1| hypothetical protein PEPMIC_00566 [Parvimonas micra ATCC 33270] gi|158446992|gb|EDP23987.1| hypothetical protein PEPMIC_00566 [Parvimonas micra ATCC 33270] Length = 638 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A + I + ++ DNG G+ E Sbjct: 43 VYEVVDNSIDEALAGVCDTITVTIFED--NSVRVEDNGSGIPVE 84 >gi|152991737|ref|YP_001357458.1| DNA gyrase subunit B [Sulfurovum sp. NBC37-1] gi|151423598|dbj|BAF71101.1| DNA gyrase subunit B [Sulfurovum sp. NBC37-1] Length = 773 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 13/59 (22%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 + E+++NS+D A ++ + G + + DNG G+ E H T KIS Sbjct: 40 VYEVVDNSIDEAMAGYCDTIKVTLTKAGSAIIE--DNGRGIPVTE-------HPTEKIS 89 >gi|152997556|ref|YP_001342391.1| DNA topoisomerase IV subunit B [Marinomonas sp. MWYL1] gi|150838480|gb|ABR72456.1| DNA topoisomerase IV, B subunit [Marinomonas sp. MWYL1] Length = 632 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 6/49 (12%) Query: 22 RPSIAIKELIENSLD----AESSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D + + R+E ++ G + DNG GM + Sbjct: 32 RPNHLAQEVIDNSVDEALASHADRIEVILYKDG--SLSVEDNGRGMPVD 78 >gi|15612569|ref|NP_240872.1| DNA gyrase subunit B [Bacillus halodurans C-125] gi|4033396|sp|O50627|GYRB_BACHD RecName: Full=DNA gyrase subunit B gi|2760177|dbj|BAA24187.1| B subunit of DNA gyrase [Bacillus sp.] gi|5672652|dbj|BAA82690.1| 78%-identity [Bacillus halodurans] gi|10172618|dbj|BAB03725.1| DNA gyrase subunit B [Bacillus halodurans C-125] Length = 637 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + VI + +TDNG G+ Sbjct: 44 EIVDNSIDEAMAGFCDEIGVVIEED--NSITVTDNGRGIP 81 >gi|238789175|ref|ZP_04632963.1| DNA topoisomerase 4 subunit B [Yersinia frederiksenii ATCC 33641] gi|238722707|gb|EEQ14359.1| DNA topoisomerase 4 subunit B [Yersinia frederiksenii ATCC 33641] Length = 631 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 71/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + R++ ++ ++ D+G GM EE + Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHARRIDVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 89 ELIMCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRDSQIYSIAFENGDK 147 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--F 184 + ++F S + + ++ +++ A+ P V F Sbjct: 148 VQDLQVIGTCGKRNTGTSVHFW----PDVSFFDSPRFSVSRLSHLLKAKAVLCPGVEIVF 203 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 + + E ++ + Sbjct: 204 KDQVNNTEQRWCYADGLTDYLMEAVNGL 231 >gi|330811443|ref|YP_004355905.1| two-component sensor [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379551|gb|AEA70901.1| putative two-component sensor [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 588 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAES----SRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA + R+E + ++D+G G+ E + Sbjct: 477 RLEQVLINLLRNALDAMADQPIKRLEVRLEADEQLWRLTVSDSGTGIAEEHLAQVFDPFF 536 Query: 77 TSK 79 T+K Sbjct: 537 TTK 539 >gi|330819659|ref|YP_004348521.1| sensor histidine kinase [Burkholderia gladioli BSR3] gi|327371654|gb|AEA63009.1| sensor histidine kinase [Burkholderia gladioli BSR3] Length = 459 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 23/52 (44%), Gaps = 6/52 (11%) Query: 30 LIENSL---DAESSRVETVI--AGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N++ A +S ++ GG ++ D G G+ + + +R Sbjct: 352 LVDNAIRYAGAGAS-IDVRTRRDAGGVPVIEVCDTGPGIPAADRARVFERFY 402 >gi|312137523|ref|YP_004004859.1| DNA gyrase subunit b [Rhodococcus equi 103S] gi|311886862|emb|CBH46170.1| DNA gyrase subunit B [Rhodococcus equi 103S] Length = 678 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 8/41 (19%) Query: 29 ELIENSLD---AE-SSRVETV-IAGGGKSFFQITDNGFGMT 64 E+++NS+D A +S+VE + GG Q+ D+G G+ Sbjct: 48 EVVDNSVDEAMAGYASKVEVTMLEDGG---IQVVDDGRGIP 85 >gi|309388287|gb|ADO76167.1| DNA gyrase subunit B [Halanaerobium praevalens DSM 2228] Length = 640 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 6/54 (11%) Query: 17 GEIIERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 +E + E+++NS+D A S V I G ++ D+G G+ E Sbjct: 33 STSLEGLHHLVYEVVDNSIDEAMAGYCSEVIVEIKPGNI--IKVQDDGRGIPVE 84 >gi|284054181|ref|ZP_06384391.1| integral membrane sensor signal transduction histidine kinase [Arthrospira platensis str. Paraca] gi|291570162|dbj|BAI92434.1| histidine kinase [Arthrospira platensis NIES-39] Length = 161 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 23/86 (26%) Query: 13 QI--AAGEIIERPSIAIKELIENSLDAESSR-----------------VETVIAGGGKSF 53 QI AG+ + LI N++DA R + ++ Sbjct: 27 QIECCAGQ----LNQVFLNLINNAIDAICDRYKKQTLEQIINEPGMIWISIMLTEQKTVQ 82 Query: 54 FQITDNGFGMTSEEIPMAVQRHCTSK 79 +I DNG G++ E I T+K Sbjct: 83 IRIADNGIGISPEIISKVFDPFYTTK 108 >gi|282881781|ref|ZP_06290439.1| DNA gyrase, B subunit [Peptoniphilus lacrimalis 315-B] gi|281298391|gb|EFA90829.1| DNA gyrase, B subunit [Peptoniphilus lacrimalis 315-B] Length = 639 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A ++ VI G + DNG G+ E Sbjct: 42 VYEVVDNSIDEALAGICDHIKIVITKNG--SCYVEDNGSGIPVE 83 >gi|269314037|gb|ACZ36920.1| DNA gyrase B [Mycobacterium immunogenum] Length = 651 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 8/41 (19%) Query: 29 ELIENSLD---AE-SSRVETV-IAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ VE +A GG Q+ D+G G+ Sbjct: 37 EVVDNSVDEAMAGYATTVEVTMLADGG---IQVKDDGRGIP 74 >gi|269314033|gb|ACZ36918.1| DNA gyrase B [Mycobacterium bolletii] gi|269314039|gb|ACZ36921.1| DNA gyrase B [Mycobacterium massiliense] Length = 651 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 8/41 (19%) Query: 29 ELIENSLD---AE-SSRVETV-IAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ VE +A GG Q+ D+G G+ Sbjct: 37 EVVDNSVDEAMAGYATTVEVTMLADGG---IQVKDDGRGIP 74 >gi|269314031|gb|ACZ36917.1| DNA gyrase B [Mycobacterium massiliense] Length = 651 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 8/41 (19%) Query: 29 ELIENSLD---AE-SSRVETV-IAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ VE +A GG Q+ D+G G+ Sbjct: 37 EVVDNSVDEAMAGYATTVEVTMLADGG---IQVKDDGRGIP 74 >gi|227831835|ref|YP_002833542.1| DNA gyrase subunit B [Corynebacterium aurimucosum ATCC 700975] gi|262183099|ref|ZP_06042520.1| DNA gyrase subunit B [Corynebacterium aurimucosum ATCC 700975] gi|227452851|gb|ACP31604.1| DNA gyrase subunit B [Corynebacterium aurimucosum ATCC 700975] Length = 681 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 8/43 (18%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + +V + GG ++ DNG G+ E Sbjct: 43 EIVDNSVDEAMAGYADKVIVTLREDGG---IEVIDNGRGIPVE 82 >gi|169627114|ref|YP_001700763.1| DNA gyrase subunit B [Mycobacterium abscessus ATCC 19977] gi|169239081|emb|CAM60109.1| DNA gyrase (subunit B) GyrB (DNA topoisomerase) [Mycobacterium abscessus] Length = 675 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 8/41 (19%) Query: 29 ELIENSLD---AE-SSRVETV-IAGGGKSFFQITDNGFGMT 64 E+++NS+D A ++ VE +A GG Q+ D+G G+ Sbjct: 48 EVVDNSVDEAMAGYATTVEVTMLADGG---IQVKDDGRGIP 85 >gi|158954864|gb|ABW84389.1| DNA topoisomerase IV subunit B [Spiroplasma sp. CRAYFISH] Length = 559 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 15/56 (26%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 E+++NS+D A +S + +I G + DNG G+ + +H + K Sbjct: 21 EIVDNSIDEALAGFASEINIIIHKNNG---ITVKDNGRGVP-------IGKHASGK 66 >gi|158954862|gb|ABW84388.1| DNA topoisomerase IV subunit B [Spiroplasma eriocheiris] gi|158954868|gb|ABW84391.1| DNA topoisomerase IV subunit B [Spiroplasma sp. SHRIMP] Length = 568 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 15/56 (26%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 E+++NS+D A +S + +I G + DNG G+ + +H + K Sbjct: 21 EIVDNSIDEALAGFASEINIIIHKNNG---ITVKDNGRGVP-------IGKHASGK 66 >gi|167646829|ref|YP_001684492.1| DNA topoisomerase IV subunit B [Caulobacter sp. K31] gi|167349259|gb|ABZ71994.1| DNA topoisomerase IV, B subunit [Caulobacter sp. K31] Length = 707 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 6/46 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 E+++NS+D A + +E + G + + D+G GM +E P Sbjct: 103 EVLDNSMDEAVAGFAKTIEVRLDADG--YLSVKDDGRGMPVDEHPK 146 >gi|94983857|gb|ABF50633.1| DNA topoisomerase IV subunit B [Spiroplasma mirum] gi|158954866|gb|ABW84390.1| DNA topoisomerase IV subunit B [Spiroplasma mirum] Length = 554 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 15/56 (26%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 E+++NS+D A +S + +I G + DNG G+ + +H + K Sbjct: 14 EIVDNSIDEALAGFASEINIIIHKNNG---ITVKDNGRGVP-------IGKHASGK 59 >gi|187478868|ref|YP_786892.1| DNA topoisomerase IV subunit B [Bordetella avium 197N] gi|115423454|emb|CAJ49988.1| topoisomerase IV subunit B [Bordetella avium 197N] Length = 670 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 15/69 (21%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 E P ++E+I+N+ D A +++ + G + D+G G+ EE + Sbjct: 48 ENPLHIVQEVIDNAADEALAGHGKQIQVTLHADG--SISVEDDGRGIPVGLHPEENAPVV 105 Query: 69 PMAVQR-HC 76 + R H Sbjct: 106 ELVFTRLHA 114 >gi|325677512|ref|ZP_08157176.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Rhodococcus equi ATCC 33707] gi|111185878|dbj|BAF02676.1| DNA gyrase subunit B [Rhodococcus equi] gi|325551759|gb|EGD21457.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Rhodococcus equi ATCC 33707] Length = 678 Score = 45.0 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 8/41 (19%) Query: 29 ELIENSLD---AE-SSRVETV-IAGGGKSFFQITDNGFGMT 64 E+++NS+D A +S+VE + GG Q+ D+G G+ Sbjct: 48 EVVDNSVDEAMAGYASKVEVTMLEDGG---IQVVDDGRGIP 85 >gi|315606879|ref|ZP_07881888.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella buccae ATCC 33574] gi|315251544|gb|EFU31524.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Prevotella buccae ATCC 33574] Length = 679 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 74/258 (28%), Gaps = 24/258 (9%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT-SKI 80 +KE+I+NS+D A R+E I + D G G+ ++ AV T K Sbjct: 81 LKEVIDNSIDEFKMNAG-DRIEVDIDDN--LRVSVRDYGRGIPQGKLVEAVSMLNTGGKY 137 Query: 81 SDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPG 139 + G G L ++ A+S S K + G Sbjct: 138 DSKAFK-KSVGLNGVGLKAVNALSARFEAKSYRDGTVRELVFERGVLKDDETHETSDESG 196 Query: 140 TIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF----TFSTIKSNRYK 195 T + K+ + +++ ++R ++ + Sbjct: 197 TFIFFE-------PDALLFKNYKFHDDIVETMLRNYTYLNTGLTIMYNGRRILSRHGLKD 249 Query: 196 MNFQSTNGNFPERISQVIGED--FINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVF 253 + + + I V GED + + G +A + ++ Sbjct: 250 LLTDNMTVDGLYDIVHVKGEDIEIAFTHTNQYGEEYHSFVNGQHTTQGGTHQSAFKEHIA 309 Query: 254 INGRTVQDKFILSTIRTA 271 + K+ IR Sbjct: 310 KTIKEFYGKYEYGDIRNG 327 >gi|311105288|ref|YP_003978141.1| C4-dicarboxylate transport sensor protein DctB [Achromobacter xylosoxidans A8] gi|310759977|gb|ADP15426.1| C4-dicarboxylate transport sensor protein DctB [Achromobacter xylosoxidans A8] Length = 659 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 11/80 (13%) Query: 7 SEKIINQIAAGEIIERPSIAIKELIENSLDA------ESSRVETVIAGGGKSF-FQITDN 59 E + Q+ A + R + L++N++DA R+ + G + ++DN Sbjct: 518 PEDLNYQVLANRV--RLEQVLVNLLQNAMDALEGLPDG--RIVVALQDLGATVQIYVSDN 573 Query: 60 GFGMTSEEIPMAVQRHCTSK 79 G G++ T+K Sbjct: 574 GPGLSPAARAHLFTPFHTTK 593 >gi|307293189|ref|ZP_07573035.1| integral membrane sensor signal transduction histidine kinase [Sphingobium chlorophenolicum L-1] gi|306881255|gb|EFN12471.1| integral membrane sensor signal transduction histidine kinase [Sphingobium chlorophenolicum L-1] Length = 441 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 30 LIENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N+ +A ++ ++ ++ S + DNG G + + + + +SK Sbjct: 338 LLDNAREAGATYIDLLVGRDSASLNIAVRDNGSGFSEAMLEDFGKPYRSSK 388 >gi|301309776|ref|ZP_07215715.1| putative DNA-binding response regulator/sensor histidine kinase [Bacteroides sp. 20_3] gi|300831350|gb|EFK61981.1| putative DNA-binding response regulator/sensor histidine kinase [Bacteroides sp. 20_3] Length = 911 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%), Gaps = 1/39 (2%) Query: 41 RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTS 78 ++ + + DNG G+ E + +R TS Sbjct: 536 KITIRLREEETEVVLSVEDNGEGIPPENLASVFERFFTS 574 >gi|298376456|ref|ZP_06986411.1| DNA-binding response regulator/sensor histidine kinase [Bacteroides sp. 3_1_19] gi|298266334|gb|EFI07992.1| DNA-binding response regulator/sensor histidine kinase [Bacteroides sp. 3_1_19] Length = 911 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%), Gaps = 1/39 (2%) Query: 41 RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTS 78 ++ + + DNG G+ E + +R TS Sbjct: 536 KITIRLREEETEVVLSVEDNGEGIPPENLASVFERFFTS 574 >gi|288925439|ref|ZP_06419373.1| DNA gyrase subunit B (Topoisomerase II subunit B) [Prevotella buccae D17] gi|288337910|gb|EFC76262.1| DNA gyrase subunit B (Topoisomerase II subunit B) [Prevotella buccae D17] Length = 627 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 38/258 (14%), Positives = 74/258 (28%), Gaps = 24/258 (9%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT-SKI 80 +KE+I+NS+D A R+E I + D G G+ ++ AV T K Sbjct: 29 LKEVIDNSIDEFKMNAG-DRIEVDIDDN--LRVSVRDYGRGIPQGKLVEAVSMLNTGGKY 85 Query: 81 SDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPVAMNPG 139 + G G L ++ A+S S K + G Sbjct: 86 DSKAFK-KSVGLNGVGLKAVNALSARFEAKSYRDGTVRELVFERGVLKDDETHETSDESG 144 Query: 140 TIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF----TFSTIKSNRYK 195 T + K+ + +++ ++R ++ + Sbjct: 145 TFIFFE-------PDALLFKNYKFHDDIVETMLRNYTYLNTGLTIMYNGRRILSRHGLKD 197 Query: 196 MNFQSTNGNFPERISQVIGED--FINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVF 253 + + + I V GED + + G +A + ++ Sbjct: 198 LLTDNMTVDGLYDIVHVKGEDIEIAFTHTNQYGEEYHSFVNGQHTTQGGTHQSAFKEHIA 257 Query: 254 INGRTVQDKFILSTIRTA 271 + K+ IR Sbjct: 258 KTIKEFYGKYEYGDIRNG 275 >gi|150008119|ref|YP_001302862.1| two-component system sensor kinase/response regulator [Parabacteroides distasonis ATCC 8503] gi|149936543|gb|ABR43240.1| two-component system sensor kinase/response regulator, hybrid [Parabacteroides distasonis ATCC 8503] Length = 911 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%), Gaps = 1/39 (2%) Query: 41 RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTS 78 ++ + + DNG G+ E + +R TS Sbjct: 536 KITIRLREEETEVVLSVEDNGEGIPPENLASVFERFFTS 574 >gi|83718905|ref|YP_443253.1| DNA mismatch repair protein [Burkholderia thailandensis E264] gi|257139489|ref|ZP_05587751.1| putative DNA mismatch repair protein [Burkholderia thailandensis E264] gi|83652730|gb|ABC36793.1| putative DNA mismatch repair protein [Burkholderia thailandensis E264] Length = 660 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 4/69 (5%) Query: 29 ELIENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCTSKISDDFS 85 EL+ N DA++ VE + S +I D+G G+ + R S +D + Sbjct: 33 ELVWNGFDAKADLVEVDVRLNSLSALATVRILDDGDGIDPTTLKHTFGRFNDSHKREDAA 92 Query: 86 NIHTFGFRG 94 G RG Sbjct: 93 QHGAHG-RG 100 >gi|148264739|ref|YP_001231445.1| multi-sensor signal transduction histidine kinase [Geobacter uraniireducens Rf4] gi|146398239|gb|ABQ26872.1| multi-sensor signal transduction histidine kinase [Geobacter uraniireducens Rf4] Length = 438 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 38/84 (45%), Gaps = 16/84 (19%) Query: 4 RKLSEKIINQIAAGE--II---ERPSIAIKELIENSLDAESS--RVET-VIAGGGKSFFQ 55 ++L + GE ++ ER + +++N++DA ++ + ++ GG Sbjct: 319 KRLPD--------GELTVVADPERVRQVMVNILKNAVDATATGGTIAVGLVKTGGDVSIH 370 Query: 56 ITDNGFGMTSEEIPMAVQRHCTSK 79 +TD+G G+ + I T+K Sbjct: 371 VTDSGPGIADDAIEKIFDVFYTTK 394 >gi|88808580|ref|ZP_01124090.1| heat shock protein 90 [Synechococcus sp. WH 7805] gi|88787568|gb|EAR18725.1| heat shock protein 90 [Synechococcus sp. WH 7805] Length = 633 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 33/118 (27%) Query: 27 IKELIENSLDAESSR----------------VETVIAGGGKSFFQITDNGFGMTSEEIPM 70 ++EL+ N +DA S R ++ I K+ I+DNG GMT++E+ Sbjct: 33 LRELVSNGVDAISKRRMASIAGDCSEGDEGVIQIRIDRSNKTL-TISDNGIGMTADEVKR 91 Query: 71 AVQRHCTS-------KISDDFSNI---HTFGFRGEALPSIGAVS-HLTLMSRPPQNNT 117 + + S K D I GF S V+ + + +R + + Sbjct: 92 YINQVAFSSAEDFLEKYKQDSEAIIGHFGLGF-----YSSFMVAERVEISTRSARPES 144 >gi|328883698|emb|CCA56937.1| DNA gyrase subunit B [Streptomyces venezuelae ATCC 10712] Length = 676 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I G ++ DNG G+ Sbjct: 55 VQEVVDNSVDEALAGHADTIDVTILADGA--VRVVDNGRGIP 94 >gi|326536845|ref|YP_004300843.1| DNA topoisomerase II large subunit [Aeromonas phage 65] gi|312596865|gb|AAR90934.2| DNA topoisomerase II large subunit [Aeromonas phage 65] Length = 667 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 8/56 (14%) Query: 20 IERPSIAIKELIENSLD-A------ESSRVETVIAGGGKSFFQITDNGFGMTSEEI 68 I + I E+++NS+D A +++++ V+ + I+DNG G+ ++ Sbjct: 45 IPGLAKVIDEIVDNSVDEAIRTDFKYANKIDIVVDD-QTNQVTISDNGRGIPQYDV 99 >gi|312884330|ref|ZP_07744039.1| Signal transduction histidine kinase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368103|gb|EFP95646.1| Signal transduction histidine kinase [Vibrio caribbenthicus ATCC BAA-2122] Length = 303 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 11/62 (17%) Query: 26 AIKELIEN-SLDA-ESS--------RVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRH 75 I+ELI N +L A +S ++ + + I DNG G++ +++ Q Sbjct: 194 VIEELINNCALHAFQSHGNKNNYTITIKVQVIDH-HTEIIIEDNGVGISPDDLNKVFQPF 252 Query: 76 CT 77 T Sbjct: 253 YT 254 >gi|269799058|gb|ACZ43807.1| DNA gyrase subunit B [Moritella viscosa] Length = 781 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I G ++D+G G+ + Sbjct: 43 EVVDNSIDEALAGHCTDIVVTIHDDG--SVSVSDDGRGIPVD 82 >gi|269799056|gb|ACZ43806.1| DNA gyrase subunit B [Moritella viscosa] gi|269799060|gb|ACZ43808.1| DNA gyrase subunit B [Moritella viscosa] Length = 805 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I G ++D+G G+ + Sbjct: 43 EVVDNSIDEALAGHCTDIVVTIHDDG--SVSVSDDGRGIPVD 82 >gi|296932705|gb|ADH93506.1| DNA gyrase subunit B [Pseudomonas sp. In5] Length = 807 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 76/246 (30%), Gaps = 24/246 (9%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A + +I + DNG G+ EE A + H Sbjct: 46 EVVDNSIDEALAGHCDDISIIIHPD--ESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLH 103 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D+ + + G G + + A+S +++ Q I G ++ V Sbjct: 104 AGGKFDDNSYKV-SGGLHGVGVSVVNALSEELVLTVRRSGKIWEQTYIHGVPKEPMKIVG 162 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T ++ K+ +++ IR ++ V +S + + Sbjct: 163 ESETTGTQIH-----FKPSDLTFKNIHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEE 217 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 + G + + N V E + + N F N Sbjct: 218 LFKY--EGGLRAFVEYLNTNKTPVNQVFHFNIQREDGIGVEIALQW-NDSFNENLLCFTN 274 Query: 256 GRTVQD 261 +D Sbjct: 275 NIPQRD 280 >gi|282163382|ref|YP_003355767.1| DNA gyrase subunit B [Methanocella paludicola SANAE] gi|282155696|dbj|BAI60784.1| DNA gyrase subunit B [Methanocella paludicola SANAE] Length = 635 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A +E I G ++D+G G+ E Sbjct: 44 VYEVVDNSIDEALAGYCHNIEVTINKDG--SVTVSDDGRGIPVE 85 >gi|262381306|ref|ZP_06074444.1| two-component system sensor kinase/response regulator [Bacteroides sp. 2_1_33B] gi|262296483|gb|EEY84413.1| two-component system sensor kinase/response regulator [Bacteroides sp. 2_1_33B] Length = 911 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%), Gaps = 1/39 (2%) Query: 41 RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTS 78 ++ + + DNG G+ E + +R TS Sbjct: 536 KITIRLREEETEVVLSVEDNGEGIPPENLASVFERFFTS 574 >gi|260425965|ref|ZP_05779944.1| PAS/PAC sensor hybrid histidine kinase [Citreicella sp. SE45] gi|260420457|gb|EEX13708.1| PAS/PAC sensor hybrid histidine kinase [Citreicella sp. SE45] Length = 738 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 10/70 (14%) Query: 12 NQIAAGEIIER-PS---IAIKELIENSL---DAESSRVETVIAG-GGKSFFQITDNGFGM 63 I +G +E PS ++ L+ N++ DA RV I GG + ++ D G G+ Sbjct: 471 RMIDSGLTVESDPSYLRRVVQNLVANAIRYTDAG--RVVVGIRRRGGAARIEVWDTGPGI 528 Query: 64 TSEEIPMAVQ 73 E+ + Sbjct: 529 AEEDQSTIFE 538 >gi|260430523|ref|ZP_05784496.1| two-component system, sensor protein [Citreicella sp. SE45] gi|260418552|gb|EEX11809.1| two-component system, sensor protein [Citreicella sp. SE45] Length = 452 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 27/53 (50%), Gaps = 8/53 (15%) Query: 30 LIENSL----DAESSRVETV--IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L++N+L D +R+ ++ G + + D+G G+ +++ +A +R Sbjct: 358 LVDNALRHGGD-GMTRITVRTALSDAGVA-VTVQDDGIGIPADQSEVAFRRFS 408 >gi|255014965|ref|ZP_05287091.1| two-component system sensor kinase/response regulator, hybrid [Bacteroides sp. 2_1_7] Length = 911 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%), Gaps = 1/39 (2%) Query: 41 RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTS 78 ++ + + DNG G+ E + +R TS Sbjct: 536 KITIRLREEETEVVLSVEDNGEGIPPENLASVFERFFTS 574 >gi|254976865|ref|ZP_05273337.1| two-component sensor histidine kinase [Clostridium difficile QCD-66c26] gi|255094252|ref|ZP_05323730.1| two-component sensor histidine kinase [Clostridium difficile CIP 107932] gi|255316005|ref|ZP_05357588.1| two-component sensor histidine kinase [Clostridium difficile QCD-76w55] gi|255518662|ref|ZP_05386338.1| two-component sensor histidine kinase [Clostridium difficile QCD-97b34] gi|255651784|ref|ZP_05398686.1| two-component sensor histidine kinase [Clostridium difficile QCD-37x79] gi|260684810|ref|YP_003216095.1| two-component sensor histidine kinase [Clostridium difficile CD196] gi|260688468|ref|YP_003219602.1| two-component sensor histidine kinase [Clostridium difficile R20291] gi|260210973|emb|CBA66249.1| two-component sensor histidine kinase [Clostridium difficile CD196] gi|260214485|emb|CBE06967.1| two-component sensor histidine kinase [Clostridium difficile R20291] Length = 671 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 15/31 (48%) Query: 47 AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 G + +++DNG G+ E IP R T Sbjct: 592 KEDGFAIIKVSDNGKGIPPENIPKVFDRFFT 622 >gi|149912065|ref|ZP_01900656.1| Putative DNA gyrase, subunit B [Moritella sp. PE36] gi|149804861|gb|EDM64898.1| Putative DNA gyrase, subunit B [Moritella sp. PE36] Length = 805 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + I G ++D+G G+ + Sbjct: 43 EVVDNSIDEALAGHCTDIVVTIHDDG--SVSVSDDGRGIPVD 82 >gi|94983853|gb|ABF50631.1| DNA topoisomerase IV subunit B [Spiroplasma turonicum] Length = 554 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AES-SRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A + S + I G I DNG G+ Sbjct: 14 EIVDNSIDESLAGACSEINVSIEKDG--SVTIKDNGRGVP 51 >gi|332703593|ref|ZP_08423681.1| response regulator receiver sensor signal transduction histidine kinase [Desulfovibrio africanus str. Walvis Bay] gi|332553742|gb|EGJ50786.1| response regulator receiver sensor signal transduction histidine kinase [Desulfovibrio africanus str. Walvis Bay] Length = 367 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 9/58 (15%) Query: 30 LIENSLDA-ESSR-------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+EN+LDA ++ + I + D G G+ ++ +P ++K Sbjct: 264 LVENALDAMNATATGEGRLDISARILDNSLE-IAVADTGHGIPADILPRIFDPFFSTK 320 >gi|310822652|ref|YP_003955010.1| sensor protein [Stigmatella aurantiaca DW4/3-1] gi|309395724|gb|ADO73183.1| Sensor protein [Stigmatella aurantiaca DW4/3-1] Length = 827 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 18/68 (26%) Query: 17 GEIIERPSIAIKELIENSL----DAESSRVETVIA-----GGGKSFFQITDNGFGMTSEE 67 E+++ LI N++ D+ RV G + D+G G+ +E Sbjct: 442 HEVLQN-------LITNAIHHAKDSG--RVTVRALRLTRPDGDAVKITVQDDGSGIPPDE 492 Query: 68 IPMAVQRH 75 + + R+ Sbjct: 493 LHLVFDRY 500 >gi|239502531|ref|ZP_04661841.1| putative DNA mismatch repair protein [Acinetobacter baumannii AB900] Length = 659 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 17/77 (22%) Query: 1 MK--IRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGG---GKSFFQ 55 M I+ L+E + A+ ELI N DA S V + G Sbjct: 16 MPGHIKTLTEASATK------------ALSELIWNGFDASSQIVTVTLNYNSMEGLDSIV 63 Query: 56 ITDNGFGMTSEEIPMAV 72 + D G G+ +++ + Sbjct: 64 VEDQGSGIPYKDVELFF 80 >gi|115380379|ref|ZP_01467377.1| hypothetical protein STIAU_7484 [Stigmatella aurantiaca DW4/3-1] gi|115362614|gb|EAU61851.1| hypothetical protein STIAU_7484 [Stigmatella aurantiaca DW4/3-1] Length = 508 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 18/68 (26%) Query: 17 GEIIERPSIAIKELIENSL----DAESSRVETVIA-----GGGKSFFQITDNGFGMTSEE 67 E+++ LI N++ D+ RV G + D+G G+ +E Sbjct: 123 HEVLQN-------LITNAIHHAKDSG--RVTVRALRLTRPDGDAVKITVQDDGSGIPPDE 173 Query: 68 IPMAVQRH 75 + + R+ Sbjct: 174 LHLVFDRY 181 >gi|160881920|ref|YP_001560888.1| histidine kinase [Clostridium phytofermentans ISDg] gi|160430586|gb|ABX44149.1| histidine kinase [Clostridium phytofermentans ISDg] Length = 185 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Query: 32 ENSLDAESSRVETVIAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCT 77 +NS+ A+++ + + K I DNG GMT E++ + T Sbjct: 14 QNSIRADATLIIITVTADRKKDTMTIVIKDNGCGMTKEQVTHVLDPFFT 62 >gi|312136520|ref|YP_004003857.1| DNA topoisomerase vi, b subunit [Methanothermus fervidus DSM 2088] gi|311224239|gb|ADP77095.1| DNA topoisomerase VI, B subunit [Methanothermus fervidus DSM 2088] Length = 521 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 75/203 (36%), Gaps = 33/203 (16%) Query: 20 IERPSIAIKELIENSLDA--ESS---RVETVIAGGGKSFFQIT--DNGFGMTSEEIPMAV 72 I ++ ELI NSLDA E+ +E + K ++ + DNG G+ + +P Sbjct: 34 IRSLTMVFHELITNSLDAAEEAGILPNIEIELERIDKDYYVLRHQDNGPGIPEDYVPKVF 93 Query: 73 QR-HCTSKISDDFSNIHT-----FGFRGEALPSIGAVSH-LTLMSRPPQNNT--GAQIAI 123 + SK NI + G G L S + ++S+ ++ G ++ + Sbjct: 94 CKMFAGSKFR----NIQSRGQQGLGCSGCVLFSQMTTGKPVRVISKYKEDGEIKGVEMLL 149 Query: 124 SGEKISSVRPV-----AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178 ++ + + GT V V + + +SEQ I RR I Sbjct: 150 QLDEKKNEGVILEKNEVDPDGTGVFVELHLKDV----TYSRSEQGAFEYI----RRTMIG 201 Query: 179 YPKVSFTFSTIKSNRYKMNFQST 201 P TF + YK ST Sbjct: 202 NPHAQITFKDPRGKIYKFKRAST 224 >gi|225850958|ref|YP_002731192.1| histidine kinase [Persephonella marina EX-H1] gi|225645436|gb|ACO03622.1| histidine kinase [Persephonella marina EX-H1] Length = 385 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 31 IENSLD-AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 I+N+++ A+S+ + G +I D+G G+ E+ + T Sbjct: 292 IKNAIEWAKSTVILKAYEKDGNLIIEIEDDGEGIKEEDREKIFEPFYT 339 >gi|254283642|ref|ZP_04958610.1| DNA gyrase, B subunit [gamma proteobacterium NOR51-B] gi|219679845|gb|EED36194.1| DNA gyrase, B subunit [gamma proteobacterium NOR51-B] Length = 810 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 EL++NS+D A S+++ +I + D+G G+ +E Sbjct: 49 ELVDNSIDEALAGHCSQIDVIIHPD--ESVTVADDGRGIPTE 88 >gi|194290022|ref|YP_002005929.1| sensor histidine kinase [Cupriavidus taiwanensis LMG 19424] gi|193223857|emb|CAQ69866.1| putative sensor histidine kinase [Cupriavidus taiwanensis LMG 19424] Length = 472 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 5/51 (9%) Query: 30 LIENSL---DAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 LI+N++ + V +A GG Q+ DNG G+ +E +R Sbjct: 367 LIDNAIRYAGRGA-VVTVRVAADGGVPRLQVIDNGPGIAPDEREAVFRRFY 416 >gi|29830864|ref|NP_825498.1| DNA gyrase subunit B [Streptomyces avermitilis MA-4680] gi|29607977|dbj|BAC72033.1| putative DNA gyrase subunit B [Streptomyces avermitilis MA-4680] Length = 692 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 + E+++NS+D A + ++ I A GG ++ DNG G+ Sbjct: 73 VYEVVDNSVDEALAGHADTIDITILADGG---VRVIDNGRGIP 112 >gi|238789490|ref|ZP_04633275.1| Sensor kinase dpiB [Yersinia frederiksenii ATCC 33641] gi|238722440|gb|EEQ14095.1| Sensor kinase dpiB [Yersinia frederiksenii ATCC 33641] Length = 525 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 11/72 (15%) Query: 30 LIENSLDA------ESSRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTSKISD 82 L++N+ +A +VE ++ G ++ D+G G+ + +R +SK SD Sbjct: 426 LLDNAFEASLKNPEGDKQVEIYLSDEGDDLILEVADHGCGIDPQLQDSLFERGISSKNSD 485 Query: 83 D----FSNIHTF 90 D + T+ Sbjct: 486 DHGIGLYLVATY 497 >gi|163849056|ref|YP_001637100.1| histidine kinase [Chloroflexus aurantiacus J-10-fl] gi|222527024|ref|YP_002571495.1| integral membrane sensor signal transduction histidine kinase [Chloroflexus sp. Y-400-fl] gi|163670345|gb|ABY36711.1| Histidine kinase [Chloroflexus aurantiacus J-10-fl] gi|222450903|gb|ACM55169.1| integral membrane sensor signal transduction histidine kinase [Chloroflexus sp. Y-400-fl] Length = 502 Score = 45.0 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 18/89 (20%) Query: 21 ERPSIAIKELIENSLDAESSR-------VETVIAGGGKS-FFQITDNGFGMTSEEIPMAV 72 +R + LI+N+L R + GK ++DNG G+ E +P Sbjct: 391 DRLRQVLLILIDNAL-----RYTPSGGVITIATEPAGKQIRLSVSDNGCGIAPEHLPHLF 445 Query: 73 QRHCTSKISDDFSNIHTFGFRGEALPSIG 101 +R D + + G G L I Sbjct: 446 ERFY----RVDVARNRSDGHAGLGLA-IA 469 >gi|256786618|ref|ZP_05525049.1| DNA gyrase subunit B [Streptomyces lividans TK24] gi|289770511|ref|ZP_06529889.1| DNA gyrase, B subunit [Streptomyces lividans TK24] gi|289700710|gb|EFD68139.1| DNA gyrase, B subunit [Streptomyces lividans TK24] Length = 694 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I GG ++ DNG G+ Sbjct: 75 VQEVVDNSVDEALAGHADTIDVTILPDGG---VRVVDNGRGIP 114 >gi|302543959|ref|ZP_07296301.1| DNA gyrase, B subunit [Streptomyces hygroscopicus ATCC 53653] gi|302461577|gb|EFL24670.1| DNA gyrase, B subunit [Streptomyces himastatinicus ATCC 53653] Length = 676 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I GG ++ DNG G+ Sbjct: 67 VQEVVDNSVDEAMAGHADTIDVTILPDGG---VRVVDNGRGIP 106 >gi|295837751|ref|ZP_06824684.1| DNA gyrase subunit B [Streptomyces sp. SPB74] gi|197699827|gb|EDY46760.1| DNA gyrase subunit B [Streptomyces sp. SPB74] Length = 682 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I GG ++ DNG G+ Sbjct: 60 VQEVVDNSVDEALAGHADTIDVTILPDGG---VRVVDNGRGIP 99 >gi|172039685|ref|YP_001799399.1| DNA gyrase subunit B [Corynebacterium urealyticum DSM 7109] gi|171850989|emb|CAQ03965.1| DNA gyrase subunit B [Corynebacterium urealyticum DSM 7109] Length = 699 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + +V + G +++D+G G+ E Sbjct: 65 EVVDNSVDEAMAGYAKKVSVTLKEDG--SVEVSDDGRGIPVE 104 >gi|21222282|ref|NP_628061.1| DNA gyrase subunit B [Streptomyces coelicolor A3(2)] gi|544466|sp|P35886|GYRB_STRCO RecName: Full=DNA gyrase subunit B gi|8247656|emb|CAB92994.1| DNA gyrase subunit B [Streptomyces coelicolor A3(2)] Length = 686 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I GG ++ DNG G+ Sbjct: 67 VQEVVDNSVDEALAGHADTIDVTILPDGG---VRVVDNGRGIP 106 >gi|7437457|pir||T10969 DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) chain B - Streptomyces coelicolor gi|436027|gb|AAA65215.1| DNA gyrase [Streptomyces coelicolor A3(2)] gi|1093584|prf||2104262D DNA gyrase Length = 686 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVIA-GGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I GG ++ DNG G+ Sbjct: 67 VQEVVDNSVDEALAGHADTIDVTILPDGG---VRVVDNGRGIP 106 >gi|325261171|ref|ZP_08127909.1| sensor histidine kinase [Clostridium sp. D5] gi|324032625|gb|EGB93902.1| sensor histidine kinase [Clostridium sp. D5] Length = 373 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 14/90 (15%) Query: 19 IIERPSI---AIKELIENSL---DAESSRVETVIAGGGKSFFQIT--DNGFGMTSEEIPM 70 +I P I ++ NSL D + ++ + G F Q+ DNG G+ ++++P Sbjct: 252 VIVDPEQLRRVINNIVTNSLKYMDKPAGKITMSLKDVG-DFIQVELGDNGKGIAAKDLPY 310 Query: 71 AVQRHCTSKISDDFSNIHTFGFRGEALPSI 100 R D S + G G L SI Sbjct: 311 IFNRFY----RTDASRNSSKGGSGIGL-SI 335 >gi|317125075|ref|YP_004099187.1| DNA topoisomerase IV subunit B [Intrasporangium calvum DSM 43043] gi|315589163|gb|ADU48460.1| DNA topoisomerase IV subunit B [Intrasporangium calvum DSM 43043] Length = 710 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N++D A ++ ++A G ++ DNG G+ + Sbjct: 51 EIIDNAVDEALAGVCDHIDVILARDG--SIEVRDNGRGIPVD 90 >gi|256840702|ref|ZP_05546210.1| LOW QUALITY PROTEIN: two-component system sensor kinase/response regulator [Parabacteroides sp. D13] gi|256737974|gb|EEU51300.1| LOW QUALITY PROTEIN: two-component system sensor kinase/response regulator [Parabacteroides sp. D13] Length = 536 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%), Gaps = 1/39 (2%) Query: 41 RVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQRHCTS 78 ++ + + DNG G+ E + +R TS Sbjct: 161 KITIRLREEETEVVLSVEDNGEGIPPENLASVFERFFTS 199 >gi|229543965|ref|ZP_04433024.1| PAS/PAC sensor signal transduction histidine kinase [Bacillus coagulans 36D1] gi|229325104|gb|EEN90780.1| PAS/PAC sensor signal transduction histidine kinase [Bacillus coagulans 36D1] Length = 589 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 5/60 (8%) Query: 21 ERPSIAIKELIENSLDAESSRVETVIAG----GGKSFFQITDNGFGMTSEEIPMAVQRHC 76 +R + LI+N+L SS + GG + + DNG G+ E++P +R Sbjct: 480 DRIEQVLTNLIDNALRHTSSNGYVKVKEEEAPGGV-YVHVEDNGSGIPDEDLPFVFERFY 538 >gi|228471272|ref|ZP_04056078.1| DNA topoisomerase II domain protein [Porphyromonas uenonis 60-3] gi|228306914|gb|EEK16012.1| DNA topoisomerase II domain protein [Porphyromonas uenonis 60-3] Length = 673 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 67/227 (29%), Gaps = 30/227 (13%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS--- 78 IKE+I+NS+D S + I G + QI D G G+ + V TS Sbjct: 60 IKEVIDNSIDEFVMGVGS-EIRITI-DGETNEVQIRDYGRGIP---LGKLVD--ATSKMN 112 Query: 79 ---KISDDFSNIHTFGFRGEALPSIGAVSH-LTLMSRPPQNNTGAQIAISGEKISSVRPV 134 KI + G G L ++ A+S T+ S + + + Sbjct: 113 TGAKIDSQAFK-KSVGLNGVGLKAVNALSSTFTVQSWREGETSSVTYERAEM----IAHT 167 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSF----TFSTIK 190 P E ++ + + ++R ++ + Sbjct: 168 PAEPWEDKEEHGTLVVFTPDAEVFRNSHYDLRHVEALVRNYCYLNTGLTLYLNDKKYVSR 227 Query: 191 SNRYKMNFQSTNGNFPERISQVIGEDF--INNAVELNEKSNEITLQG 235 + G+ I ++ G D +E + + G Sbjct: 228 HGLQDFLSDTITGDPLYPIIRLTGPDIEVAITHIEQYGEEFYSFVNG 274 >gi|183980040|ref|YP_001848331.1| DNA gyrase (subunit B) GyrB [Mycobacterium marinum M] gi|183173366|gb|ACC38476.1| DNA gyrase (subunit B) GyrB [Mycobacterium marinum M] Length = 692 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 13/53 (24%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E+++NS+D A +++V + G ++ DNG G+ V H T Sbjct: 63 EVVDNSVDEAMAGYATQVNVRLLDDG--SVEVADNGRGIP-------VAMHAT 106 >gi|167572503|ref|ZP_02365377.1| sensor histidine kinase [Burkholderia oklahomensis C6786] Length = 490 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 7/54 (12%) Query: 30 LIENSL----DAESSRVETVIAGGG-KSFFQITDNGFGMTSEEIPMAVQRHCTS 78 LI+N++ D + + I G + ++ D+G G+ +E +R S Sbjct: 365 LIDNAIRYAGD-GA-VITVRIVRDGDFARLEVIDDGPGIAPDERDAVFERFYRS 416 >gi|154795729|gb|ABS86852.1| gyrase B [Mycobacterium avium subsp. paratuberculosis] Length = 541 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 13/53 (24%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E+++NS+D A + RV+ I G ++ DNG G+ V H T Sbjct: 25 EVVDNSVDEAMAGYADRVDVRILDDG--SVEVADNGRGIP-------VAIHAT 68 >gi|154795733|gb|ABS86854.1| gyrase B [Mycobacterium avium subsp. paratuberculosis] Length = 542 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 13/53 (24%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E+++NS+D A + RV+ I G ++ DNG G+ V H T Sbjct: 25 EVVDNSVDEAMAGYADRVDVRILDDG--SVEVADNGRGIP-------VAIHAT 68 >gi|89512210|gb|ABD74001.1| DNA topoisomerase IV subunit beta [Mycobacterium avium subsp. paratuberculosis] Length = 179 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 13/53 (24%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E+++NS+D A + RV+ I G ++ DNG G+ V H T Sbjct: 48 EVVDNSVDEAMAGYADRVDVRILDDG--SVEVADNGRGIP-------VAIHAT 91 >gi|118615924|ref|YP_904256.1| DNA gyrase subunit B [Mycobacterium ulcerans Agy99] gi|118568034|gb|ABL02785.1| DNA gyrase (subunit B) GyrB [Mycobacterium ulcerans Agy99] Length = 692 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 13/53 (24%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E+++NS+D A +++V + G ++ DNG G+ V H T Sbjct: 63 EVVDNSVDEAMAGYATQVNVRLLDDG--SVEVADNGRGIP-------VAMHAT 106 >gi|104780397|ref|YP_606895.1| sensor histidine kinase [Pseudomonas entomophila L48] gi|95109384|emb|CAK14084.1| putative sensor histidine kinase [Pseudomonas entomophila L48] Length = 634 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 7/65 (10%) Query: 21 ERPSIAIKELIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQR 74 R + LI N+LDA +++ +E + G K ++ DNG G+ +E + Sbjct: 518 TRLEQILVNLIGNALDAMATQPLPQLWLEGEL-QGDKYRLRVRDNGHGIDAEARKHLFEP 576 Query: 75 HCTSK 79 T+K Sbjct: 577 FFTTK 581 >gi|119716163|ref|YP_923128.1| ATPase domain-containing protein [Nocardioides sp. JS614] gi|119536824|gb|ABL81441.1| ATP-binding region, ATPase domain protein [Nocardioides sp. JS614] Length = 423 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 21/97 (21%) Query: 5 KLSEKIINQIAAGEIIERPSIAIKELIENSLD----AESSRVETVIAGGGKSFFQITDNG 60 +L + + IA ER + + L+ N++ S+RV+ ++ G + D G Sbjct: 292 RLDADVPDSIAFTGDPERLAQVVDNLVSNAIKYTEPGGSARVQAIVVADGSVRISVQDTG 351 Query: 61 FGMTSEEIPMAVQRHCTSKISDDFSNIHTFGFRG-EA 96 G+ E R FRG EA Sbjct: 352 IGIDPAERARLFSRF----------------FRGAEA 372 >gi|307178864|gb|EFN67409.1| hypothetical protein EAG_14808 [Camponotus floridanus] Length = 636 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 67/185 (36%), Gaps = 13/185 (7%) Query: 373 ENRLSTNDLLPSDDPTYSEDNDPVEESEATHYQLGIACAQIH---QNYIISQTTDGLVIV 429 +N + SD + D D V + + +L + + + + + Sbjct: 421 KNSAISPLSEWSDWNYDTSDKDQVSKRDINFQRLFNCIDRFNFLPRKLHGLLRHRHVKLT 480 Query: 430 DQHAAHERLIFEKMRQDFNSTKITSQTLLTPEIIDLLEGECALIMEHDEDLHRLGIKAER 489 + + N ++ S L P +++ E ++ L + GI Sbjct: 481 NVKRFDSPSNTISRHKGQNEGELLSINLRDPLAMEIPEKTRNSLLRRKVLLKKYGINLGS 540 Query: 490 FGPNA-IAIREIPAILSKKN-------IPQLLRDIIDEII--DSSTTYTLQDRIENILAT 539 N + IR IP L N I + D++++I+ +++ TL I N +A+ Sbjct: 541 LRENTKLLIRTIPQCLVTSNDRCSSEKILSKIYDLLNDILKDNTNRANTLPVTIHNAIAS 600 Query: 540 MACYG 544 AC+G Sbjct: 601 EACHG 605 >gi|291546804|emb|CBL19912.1| DNA topoisomerase IV subunit B [Ruminococcus sp. SR1/5] Length = 652 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N++D A SR+ V+ G + DNG G+ + Sbjct: 54 EIVDNAVDEHLAGYCSRIHVVLEKDG--SCTVEDNGRGIPVD 93 >gi|289422479|ref|ZP_06424322.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius 653-L] gi|289157051|gb|EFD05673.1| DNA gyrase, B subunit [Peptostreptococcus anaerobius 653-L] Length = 635 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A S + + G + DNG G+ E Sbjct: 40 VYEVVDNSIDEALAGNCSEIYISLNDDG--SVTVRDNGRGIPVE 81 >gi|197103550|ref|YP_002128927.1| sensor histidine kinase [Phenylobacterium zucineum HLK1] gi|196476970|gb|ACG76498.1| sensor histidine kinase [Phenylobacterium zucineum HLK1] Length = 530 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Query: 42 VETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 V + G G+ ++DNG G+ E + +R TS Sbjct: 439 VTVALGRGHGRVVATVSDNGPGIPPENLETIFERFYTS 476 >gi|159897122|ref|YP_001543369.1| response regulator receiver sensor signal transduction histidine kinase [Herpetosiphon aurantiacus ATCC 23779] gi|159890161|gb|ABX03241.1| response regulator receiver sensor signal transduction histidine kinase [Herpetosiphon aurantiacus ATCC 23779] Length = 397 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 25 IAIKELIENSLD--AESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSKIS 81 A++ L+EN+ A+ ++ + I DNG G+ ++ + ++ Sbjct: 292 NAVRHLLENATQYTAQGGVIQVSVYQDDQLVRVSIRDNGVGIPEDDFERIFEPFV--RLD 349 Query: 82 DDFSNIHTFG 91 D ++I G Sbjct: 350 DTLASIGGAG 359 >gi|88604194|ref|YP_504372.1| histidine kinase [Methanospirillum hungatei JF-1] gi|88189656|gb|ABD42653.1| histidine kinase [Methanospirillum hungatei JF-1] Length = 350 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 3/50 (6%) Query: 30 LIENSL--DAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L+ENS+ + + + DNG G++++E +R Sbjct: 255 LVENSIRHGGGVTEIRISYVDEQSLLRIIYEDNGSGISADEKEKVFKRGY 304 >gi|88812626|ref|ZP_01127873.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal [Nitrococcus mobilis Nb-231] gi|88790042|gb|EAR21162.1| Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal [Nitrococcus mobilis Nb-231] Length = 869 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 8/56 (14%) Query: 30 LIENSLDA-------ESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 LI N++ A + + G+ + DNG G+ ++ + T Sbjct: 750 LIGNAIKAVQAVAEQRAGEIRIRAEEDNGRIRVSVRDNGTGIPADTLNRVFDPFYT 805 >gi|311894032|dbj|BAJ26440.1| putative two-component system sensor kinase [Kitasatospora setae KM-6054] Length = 532 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 30 LIENSLDA--ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N++DA + VE + G + ++ D+G G+ ++ + TSK Sbjct: 423 LVDNAMDAAPGGT-VEVRLRAVGSTLLVEVADSGPGIPADLRERVFEEGWTSK 474 >gi|304385859|ref|ZP_07368203.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Pediococcus acidilactici DSM 20284] gi|304328363|gb|EFL95585.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Pediococcus acidilactici DSM 20284] Length = 648 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N +D A +++++ V+ + ++DNG G+ + Sbjct: 51 EIIDNGIDEALAGFANKIDVVVEKD--NSITVSDNGRGIPVD 90 >gi|299145239|ref|ZP_07038307.1| putative two-component system sensor histidine kinase, putative heat shock protein [Bacteroides sp. 3_1_23] gi|298515730|gb|EFI39611.1| putative two-component system sensor histidine kinase, putative heat shock protein [Bacteroides sp. 3_1_23] Length = 870 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 13/57 (22%) Query: 26 AIKELIENSLDAESSRVETV---IAGGGKSFF----------QITDNGFGMTSEEIP 69 AI EL++NS DA++ RV+ + I D+G GM ++I Sbjct: 26 AILELVKNSFDADAKRVDISFSNLKENDDKSIDSYSEKTSRLIIKDDGLGMNLDDIK 82 >gi|293394994|ref|ZP_06639282.1| nitrate/nitrite sensor protein NarQ [Serratia odorifera DSM 4582] gi|291422522|gb|EFE95763.1| nitrate/nitrite sensor protein NarQ [Serratia odorifera DSM 4582] Length = 560 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 36/72 (50%), Gaps = 10/72 (13%) Query: 2 KIR---KLSEKIINQIAAGEIIERPSIAIKELIENSLD-AESSRVETV--IAGGGKSFFQ 55 +IR +LS + +N A + + ++E + N++ A++ + +A G + Sbjct: 453 RIRLHCRLSSQALN---AQQQVHAL-QIVREAVLNAIKHADAQEIVIRCGVADNGDNHIC 508 Query: 56 ITDNGFGMTSEE 67 I+D+G G+ S + Sbjct: 509 ISDDGCGIDSLD 520 >gi|270289888|ref|ZP_06196114.1| DNA gyrase, B subunit [Pediococcus acidilactici 7_4] gi|270281425|gb|EFA27257.1| DNA gyrase, B subunit [Pediococcus acidilactici 7_4] Length = 648 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N +D A +++++ V+ + ++DNG G+ + Sbjct: 51 EIIDNGIDEALAGFANKIDVVVEKD--NSITVSDNGRGIPVD 90 >gi|240139869|ref|YP_002964346.1| DNA topoisomerase IV, subunit B [Methylobacterium extorquens AM1] gi|240009843|gb|ACS41069.1| DNA topoisomerase IV, subunit B [Methylobacterium extorquens AM1] Length = 685 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A +S +E + G +TDNG G+ + Sbjct: 80 EVIDNSMDEAVAGHASFIEVELEESG--SLVVTDNGRGIPVD 119 >gi|226349418|ref|YP_002776532.1| putative two-component histidine kinase [Rhodococcus opacus B4] gi|226245333|dbj|BAH55680.1| putative two-component histidine kinase [Rhodococcus opacus B4] Length = 478 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 9/57 (15%) Query: 24 SIAIKELIENSLDAES----SRVETVIAGGGKS-FFQITDNGFGMTSEEIPMAVQRH 75 S ++ L++N+ + + V ++ + +++D+G G+ E +R Sbjct: 356 SRVVRNLVDNA----ARYATTTVRVRVSSDSVTARIEVSDDGPGIPETERDRVFERF 408 >gi|218531372|ref|YP_002422188.1| DNA topoisomerase IV subunit B [Methylobacterium chloromethanicum CM4] gi|254562291|ref|YP_003069386.1| DNA topoisomerase IV subunit B [Methylobacterium extorquens DM4] gi|218523675|gb|ACK84260.1| DNA topoisomerase IV, B subunit [Methylobacterium chloromethanicum CM4] gi|254269569|emb|CAX25539.1| DNA topoisomerase IV, subunit B [Methylobacterium extorquens DM4] Length = 685 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A +S +E + G +TDNG G+ + Sbjct: 80 EVIDNSMDEAVAGHASFIEVELEESG--SLVVTDNGRGIPVD 119 >gi|163852535|ref|YP_001640578.1| DNA topoisomerase IV subunit B [Methylobacterium extorquens PA1] gi|163664140|gb|ABY31507.1| DNA topoisomerase IV, B subunit [Methylobacterium extorquens PA1] Length = 701 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A +S +E + G +TDNG G+ + Sbjct: 96 EVIDNSMDEAVAGHASFIEVELEESG--SLVVTDNGRGIPVD 135 >gi|91779050|ref|YP_554258.1| periplasmic sensor signal transduction histidine kinase, tctE [Burkholderia xenovorans LB400] gi|91691710|gb|ABE34908.1| periplasmic sensor signal transduction histidine kinase, tctE [Burkholderia xenovorans LB400] Length = 472 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 7/54 (12%) Query: 30 LIENSL----DAESSRVETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTS 78 LI+N++ D + + + G ++ Q+ DNG G+ + E +R S Sbjct: 372 LIDNAIRYSGD-GA-VITVRVAREGEQALLQVIDNGPGIAASEREAVFERFYRS 423 >gi|29350163|ref|NP_813666.1| putative two-component system sensor histidine kinase [Bacteroides thetaiotaomicron VPI-5482] gi|29342075|gb|AAO79860.1| putative two-component system sensor histidine kinase, putative heat shock protein [Bacteroides thetaiotaomicron VPI-5482] Length = 870 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 13/57 (22%) Query: 26 AIKELIENSLDAESSRVETV---IAGGGKSFF----------QITDNGFGMTSEEIP 69 AI EL++NS DA++ RV+ + I D+G GM ++I Sbjct: 26 AILELVKNSFDADAKRVDISFSNLKENDDKSIDSYSEKTSRLIIKDDGLGMNLDDIK 82 >gi|18147149|dbj|BAB83055.1| DNA gyrase subunit B [Marinobacterium georgiense] Length = 301 Score = 45.0 bits (105), Expect = 0.033, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 76/253 (30%), Gaps = 38/253 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 EL++N +D A S + +I ++DNG G+ EE A + H Sbjct: 13 ELVDNGIDEALAGHCSEIAVIIHPD--ESVTVSDNGRGIPTDIHKEEGVSAAEVIMTVLH 70 Query: 76 CTSKISDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKIS 129 K D+ + + G G AL S L L R ++ Sbjct: 71 AGGKFDDNTYKV-SGGLHGVGVSVVNALSS-----ELKLTIRRAGQVHEQIYHHGVPEVP 124 Query: 130 SVRPVAMN-PGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFST 188 + GTIV + + + +++ +R ++ V Sbjct: 125 LRVVGETDLTGTIVRFK-------PSEETFTNISFQYDILAKRLRELSFLNSGVRIRLKD 177 Query: 189 IKSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNAN 248 +S R ++ G + + N + +E G +N G Sbjct: 178 ERSGREEV--FEYEGGLAAFVEFLNQNKSPINKIFHFNTMHE-NGVGVEVAMQWNDGFQE 234 Query: 249 QFYVFINGRTVQD 261 + F N +D Sbjct: 235 GLHCFANNIPQRD 247 >gi|300724859|ref|YP_003714184.1| DNA topoisomerase IV subunit B [Xenorhabdus nematophila ATCC 19061] gi|297631401|emb|CBJ92098.1| DNA topoisomerase IV, subunit B [Xenorhabdus nematophila ATCC 19061] Length = 631 Score = 45.0 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 68/208 (32%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + +E ++ ++ D+G GM EE + Sbjct: 31 TRPNHLAQEVIDNSVDEALAGHAKHIEVILHSD--QSLEVIDDGRGMPVDIHPEEKVSAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 89 ELILTRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVTVRRYSQVHQIAFENGEK 147 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--F 184 + + ++ + +T +++ A+ P V F Sbjct: 148 VQELDVIGSCGKRNTGTSVHFW----PDESYFDIPRFSVTRLTHLLKAKAVLCPGVEIVF 203 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 + + E ++ + Sbjct: 204 KDKLNGTEQKWCYADGLTDYLLEAVNGL 231 >gi|300780472|ref|ZP_07090328.1| sensor histidine kinase [Corynebacterium genitalium ATCC 33030] gi|300534582|gb|EFK55641.1| sensor histidine kinase [Corynebacterium genitalium ATCC 33030] Length = 479 Score = 45.0 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 12/67 (17%) Query: 21 ERPSIAIKELIENSL-----DAESSRVETVIAGG-GKSFFQITDNGFGMTSEEIPMAVQR 74 +R + LI N+ DA V + + + + D+G GM+ E+ +R Sbjct: 363 DRLHQVVLNLISNAFKHAGDDAN---VTVTVRDYLDRVYVDVADDGIGMSKEDAAHIFER 419 Query: 75 HC---TS 78 TS Sbjct: 420 FYRADTS 426 >gi|158521360|ref|YP_001529230.1| histidine kinase [Desulfococcus oleovorans Hxd3] gi|158510186|gb|ABW67153.1| histidine kinase [Desulfococcus oleovorans Hxd3] Length = 554 Score = 45.0 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%) Query: 38 ESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 + + + G + DNG G+T E++ T+K Sbjct: 468 GA-EIRVRSLREGNDLVITVADNGCGITPEDMEKIYLPFFTTK 509 >gi|237736253|ref|ZP_04566734.1| DNA gyrase subunit B [Fusobacterium mortiferum ATCC 9817] gi|229421601|gb|EEO36648.1| DNA gyrase subunit B [Fusobacterium mortiferum ATCC 9817] Length = 635 Score = 45.0 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 84/247 (34%), Gaps = 34/247 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE----------EIPMAVQR 74 E+++NS+D A + +E I + ++ DNG G+ + EI + V Sbjct: 41 EIVDNSVDEALAGYCTHIEVSILPD--NVIEVVDNGRGIPVDIHPKYGKSALEIVLTVL- 97 Query: 75 HCTSKISDDFSNIHTFGFRGEALPSIGAVS---HLTLMSRPPQNNTGAQIAIS--GEKIS 129 H K +D + + G G + + A+S + + Q E+ Sbjct: 98 HAGGKFENDNYKV-SGGLHGVGVSVVNALSLWTEVEV---RKNGKVWYQKYNRGIPEEAV 153 Query: 130 SVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTI 189 + GT V + A ++ + N + + ++ +A + T + Sbjct: 154 KEIGITEEHGTTVRFK-------ADHEIFETLVYDYNTLKNRLKELAYLNKGLVITLTDS 206 Query: 190 KSNRYKMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQ 249 + +K G + + ++ ED E + E+ G + + Sbjct: 207 RKEPFKKEIFEFEGGIADFLREIT-EDTEKLIKEPIYMTGEVDNIGVEIAFLYTVNQSEI 265 Query: 250 FYVFING 256 Y F+N Sbjct: 266 IYSFVNN 272 >gi|225165618|ref|ZP_03727428.1| DNA topoisomerase (ATP-hydrolyzing) [Opitutaceae bacterium TAV2] gi|224800132|gb|EEG18551.1| DNA topoisomerase (ATP-hydrolyzing) [Opitutaceae bacterium TAV2] Length = 895 Score = 45.0 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 7/51 (13%) Query: 21 ER-PSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 ER + E+++NS+D A SR+E I G I DNG G+ + Sbjct: 68 ERALHHCVSEVLDNSVDEHLAGHCSRIEVNIHVDG--SISIRDNGRGIPVD 116 >gi|170016363|ref|YP_001727282.1| DNA gyrase, B subunit [Leuconostoc citreum KM20] gi|169803220|gb|ACA81838.1| DNA gyrase, B subunit [Leuconostoc citreum KM20] Length = 669 Score = 45.0 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++N +D A +S + I + +TD+G G+ + Sbjct: 71 EIVDNGIDEALAGFASHITVTIEAD--NSITVTDDGRGIPVD 110 >gi|209549805|ref|YP_002281722.1| integral membrane sensor signal transduction histidine kinase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535561|gb|ACI55496.1| integral membrane sensor signal transduction histidine kinase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 447 Score = 45.0 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Query: 26 AIKELIENSLD--AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 A+ L+ N++D S + ++ G + D G G+ +E + + Sbjct: 353 AVSNLVRNAIDHGGGSGMIPVSVSAFGGGRISVADEGPGIPAEHRELVFEPFY 405 >gi|2961387|emb|CAA18134.1| putative protein [Arabidopsis thaliana] gi|7270581|emb|CAB80299.1| putative protein [Arabidopsis thaliana] Length = 517 Score = 45.0 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 8/68 (11%) Query: 19 IIERPSIAIKELIENSLDA---ESSRVETV----IAGGGKSFFQITDNGFGMTSEEIPMA 71 ++ + AI EL++N++D ++ V+ + + D+G GM + Sbjct: 65 VVTPTAPAIAELLDNAVDEIQNGATFVKIDKINIVKDNSPALVF-QDDGGGMDPAGLRKC 123 Query: 72 VQRHCTSK 79 + +SK Sbjct: 124 MSLGYSSK 131 >gi|255320043|ref|ZP_05361239.1| DNA topoisomerase IV, B subunit [Acinetobacter radioresistens SK82] gi|262380549|ref|ZP_06073703.1| DNA topoisomerase IV, B subunit [Acinetobacter radioresistens SH164] gi|255302911|gb|EET82132.1| DNA topoisomerase IV, B subunit [Acinetobacter radioresistens SK82] gi|262297995|gb|EEY85910.1| DNA topoisomerase IV, B subunit [Acinetobacter radioresistens SH164] Length = 626 Score = 45.0 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 6/50 (12%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+N++D A ++++ + G + DNG GM + Sbjct: 29 TRPNHLAQEVIDNAVDEALAGHANQIAVKVYKDG--SLSVEDNGRGMPVD 76 >gi|86360840|ref|YP_472727.1| hypothetical protein RHE_PF00107 [Rhizobium etli CFN 42] gi|86284942|gb|ABC94000.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 578 Score = 45.0 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 38/105 (36%), Gaps = 23/105 (21%) Query: 22 RPSIAIKELIENSLDAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPMA--------- 71 P A+ +LI+NSL A + +V + G +I D+G GM + + A Sbjct: 105 SPETALADLIDNSLAAGARQVRIHLDWRDGNPLVEILDDGTGMNFDRLVEAMRFGGAGPS 164 Query: 72 VQRHCTSKISDDFSNIHTFGFRGEAL--PSIGAVSHLTLMSRPPQ 114 +R G G L S+ LT+ SR Sbjct: 165 AER-----------QGGDLGRFGLGLKTASLSQCRELTVASRREG 198 >gi|85857848|ref|YP_460050.1| DNA gyrase subunit B [Syntrophus aciditrophicus SB] gi|85720939|gb|ABC75882.1| DNA gyrase subunit B [Syntrophus aciditrophicus SB] Length = 800 Score = 45.0 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 21/97 (21%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIP------- 69 E + E+++NS+D A ++ I + + DNG G+ + Sbjct: 33 EGLHHLVYEVVDNSIDEASAGYCDKITVKIRVD--NSIMVEDNGRGIPVDMHETGVSAAE 90 Query: 70 -MAVQRHCTSKISDDFSNIHTFGFRG------EALPS 99 + + H K S+D I + G G AL S Sbjct: 91 VVMTKLHAGGKFSNDSYKI-SGGLHGVGVSVVNALSS 126 >gi|83952335|ref|ZP_00961066.1| putative two-component sensor histidine kinase protein [Roseovarius nubinhibens ISM] gi|83836008|gb|EAP75306.1| putative two-component sensor histidine kinase protein [Roseovarius nubinhibens ISM] Length = 623 Score = 45.0 bits (105), Expect = 0.034, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 8/69 (11%) Query: 17 GEIIERPSIAIKELIENSLDAE----SSRVETVIA--GGGKSFFQITDNGFGMTSEEIPM 70 G++ R + L+ N+LDA + + +A G+ ++ D+G G+T + + Sbjct: 502 GQV--RLQQVLVNLLANALDAMETQPAPEIGIRVAGLDSGRWIVEVRDHGEGLTDDTMAQ 559 Query: 71 AVQRHCTSK 79 T+K Sbjct: 560 LFDPFFTTK 568 >gi|256829199|ref|YP_003157927.1| CheA signal transduction histidine kinase [Desulfomicrobium baculatum DSM 4028] gi|256578375|gb|ACU89511.1| CheA signal transduction histidine kinase [Desulfomicrobium baculatum DSM 4028] Length = 686 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 15/64 (23%) Query: 18 EIIERPSIAIKELIENSLDAE--------SS------RVETVIA-GGGKSFFQITDNGFG 62 +IER + + L+ NS+D + R+E GG+ +I D+G G Sbjct: 414 TVIERLNDPLVHLLRNSIDHGIESPEERLAKGKNPEGRIELSAEHSGGEVLIRIIDDGAG 473 Query: 63 MTSE 66 + E Sbjct: 474 IDPE 477 >gi|152971961|ref|YP_001337070.1| DNA topoisomerase IV subunit B [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896538|ref|YP_002921278.1| DNA topoisomerase IV subunit B [Klebsiella pneumoniae NTUH-K2044] gi|262042299|ref|ZP_06015464.1| DNA topoisomerase IV [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330008928|ref|ZP_08306334.1| DNA topoisomerase IV, B subunit [Klebsiella sp. MS 92-3] gi|150956810|gb|ABR78840.1| DNA topoisomerase IV subunit B [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548860|dbj|BAH65211.1| DNA topoisomerase IV subunit B [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040363|gb|EEW41469.1| DNA topoisomerase IV [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328535028|gb|EGF61552.1| DNA topoisomerase IV, B subunit [Klebsiella sp. MS 92-3] Length = 631 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 71/208 (34%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + RVE ++ ++ D+G GM EE + Sbjct: 31 TRPNHLGQEVIDNSVDEALAGHAKRVEVILHAD--QSLEVIDDGRGMPVDIHPEEGVPAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R + Sbjct: 89 ELILCRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRVEVNVRRDGQVYSIAFENGEK 147 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--F 184 + +F S + + +T +++ A+ P V F Sbjct: 148 VEDLHVTGTCGKRNTGTSVHFW----PDESFFDSPRFSVSRLTHLLKAKAVLCPGVEIVF 203 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 S + N E ++ + Sbjct: 204 RDQVNNSEQSWCYADGLNDYLSEAVNGL 231 >gi|95929116|ref|ZP_01311861.1| multi-sensor signal transduction histidine kinase [Desulfuromonas acetoxidans DSM 684] gi|95135017|gb|EAT16671.1| multi-sensor signal transduction histidine kinase [Desulfuromonas acetoxidans DSM 684] Length = 595 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 30 LIENSLDAESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L+EN++ S+ I G++ ++ D G G+ +E +P +R Sbjct: 495 LLENAIKYSSTDSTVTIRCYEEDGRAIVRVCDEGCGIEAEHLPRLFERFY 544 >gi|110633369|ref|YP_673577.1| DNA topoisomerase IV subunit B [Mesorhizobium sp. BNC1] gi|110284353|gb|ABG62412.1| DNA topoisomerase IV subunit B [Chelativorans sp. BNC1] Length = 683 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+NS+D A ++ ++ ++ G F +TDNG G+ + Sbjct: 81 EVIDNSMDEAVAGHATFIDVELSEDG--FLTVTDNGRGIPVD 120 >gi|333027583|ref|ZP_08455647.1| putative peptidase C14 caspase catalytic subunit p20 [Streptomyces sp. Tu6071] gi|332747435|gb|EGJ77876.1| putative peptidase C14 caspase catalytic subunit p20 [Streptomyces sp. Tu6071] Length = 1184 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 23/73 (31%) Query: 26 AIKELIENSLDA--------------ES------SRVET--VIAGGGKSFFQITDNGFGM 63 A++EL +N+LDA + R+ + G+ + + DNG GM Sbjct: 337 AVRELYQNALDACRYRRARSQYLDRTGALPNAYEGRIRFTQDVDEDGRRYVECEDNGVGM 396 Query: 64 TSEEIPMAVQRHC 76 E+ H Sbjct: 397 GEAELRGVFS-HA 408 >gi|307544310|ref|YP_003896789.1| DNA topoisomerase IV subunit B [Halomonas elongata DSM 2581] gi|307216334|emb|CBV41604.1| DNA topoisomerase IV subunit B [Halomonas elongata DSM 2581] Length = 626 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 8/50 (16%) Query: 22 RPSIAIKELIENSLD-A---ESSRVETVI-AGGGKSFFQITDNGFGMTSE 66 RP+ I+E+I+NS+D A + + + GG +++D+G GM + Sbjct: 30 RPNHLIQEVIDNSVDEALGGHAKAIAVRLFEDGG---VEVSDDGRGMPID 76 >gi|296446460|ref|ZP_06888404.1| PAS/PAC sensor signal transduction histidine kinase [Methylosinus trichosporium OB3b] gi|296256095|gb|EFH03178.1| PAS/PAC sensor signal transduction histidine kinase [Methylosinus trichosporium OB3b] Length = 352 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 6/68 (8%) Query: 15 AAGEII-----ERPSIAIKELIENSLDAESSRVETVIAGGGKSFF-QITDNGFGMTSEEI 68 A G ++ + + + LIEN++ + VE +A G S + D+G G++ E + Sbjct: 227 ATGPVVVPGDRDELARVAENLIENAIKYGAGPVEISLAPLGASAVFSVRDHGPGISPEHL 286 Query: 69 PMAVQRHC 76 P +R Sbjct: 287 PRLTERFY 294 >gi|288958482|ref|YP_003448823.1| topoisomerase IV subunit B [Azospirillum sp. B510] gi|288910790|dbj|BAI72279.1| topoisomerase IV subunit B [Azospirillum sp. B510] Length = 662 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 6/48 (12%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 + E+++N++D A +SR++ +A G + DNG G+ ++ P Sbjct: 49 VAEVLDNAMDEAVAGHASRIDLELAADGT--VMVRDNGRGIPIDDHPK 94 >gi|255283685|ref|ZP_05348240.1| phosphate regulon sensor protein [Bryantella formatexigens DSM 14469] gi|255265750|gb|EET58955.1| phosphate regulon sensor protein [Bryantella formatexigens DSM 14469] Length = 476 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 12/58 (20%) Query: 30 LIENSL----DAESSRVETVIAG---GGKSFFQITDNGFGMTSEEIPMAVQRHC-TSK 79 L+ N++ D + VI G + DNG G+ E++ +R T K Sbjct: 374 LVSNAIKYSNDGG--MIHVVIEDTKNSGI--IHVEDNGIGIPQEDLGRIFERFYRTDK 427 >gi|161520887|ref|YP_001584314.1| integral membrane sensor signal transduction histidine kinase [Burkholderia multivorans ATCC 17616] gi|189352930|ref|YP_001948557.1| OmpR family two-component system sensor histidine kinase [Burkholderia multivorans ATCC 17616] gi|160344937|gb|ABX18022.1| integral membrane sensor signal transduction histidine kinase [Burkholderia multivorans ATCC 17616] gi|189336952|dbj|BAG46021.1| OmpR family two-component system sensor histidine kinase [Burkholderia multivorans ATCC 17616] Length = 476 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 3/50 (6%) Query: 30 LIENSLD-AESSR-VETVI-AGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 LI+N++ A + + G + + DNG G+ +E +R Sbjct: 370 LIDNAIRYAGDRAVITVRVSREGECARLDVIDNGPGIPEDEREAVFERFH 419 >gi|111020663|ref|YP_703635.1| DNA gyrase subunit B [Rhodococcus jostii RHA1] gi|110820193|gb|ABG95477.1| DNA topoisomerase subunit B [Rhodococcus jostii RHA1] Length = 696 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 8/41 (19%) Query: 29 ELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 E+++NS+D A +++VE + GG ++ D+G G+ Sbjct: 67 EVVDNSVDEAMAGHATKVEITLLEDGG---VRVVDDGRGIP 104 >gi|301308092|ref|ZP_07214046.1| conserved hypothetical protein [Bacteroides sp. 20_3] gi|300833562|gb|EFK64178.1| conserved hypothetical protein [Bacteroides sp. 20_3] Length = 335 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Query: 30 LIENSLDAE----SSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N+++A S ++ + G + DNG G+ E I T+K Sbjct: 235 LLKNAIEACEESLSPQIVVEAVQKAGMVIISVIDNGSGIVPEAIDKVFVPFFTTK 289 >gi|255527581|ref|ZP_05394445.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7] gi|296186779|ref|ZP_06855180.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7] gi|255508714|gb|EET85090.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7] gi|296048493|gb|EFG87926.1| DNA gyrase, B subunit [Clostridium carboxidivorans P7] Length = 637 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A +E I + +TD+G GM Sbjct: 43 VYEIVDNSIDEALAGFCKNIEVFIHKD--NSITVTDDGRGMP 82 >gi|322419734|ref|YP_004198957.1| GAF sensor signal transduction histidine kinase [Geobacter sp. M18] gi|320126121|gb|ADW13681.1| GAF sensor signal transduction histidine kinase [Geobacter sp. M18] Length = 555 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 22/89 (24%) Query: 4 RKLSEKIIN--QIAAGEIIERPSIAIKELIENSLDA------ESSRVETVIA---GGGKS 52 R+L N QI +++ LI N+ DA + +E + GG+ Sbjct: 428 RELPRISANGPQI--QQVLTNF------LI-NARDALTEMDGKEKVIEVSTSMRSEGGRR 478 Query: 53 F--FQITDNGFGMTSEEIPMAVQRHCTSK 79 + +TDNG G+ E + TSK Sbjct: 479 WAVLSVTDNGIGIAPENVSKIFTPFYTSK 507 >gi|210624032|ref|ZP_03294149.1| hypothetical protein CLOHIR_02101 [Clostridium hiranonis DSM 13275] gi|210153239|gb|EEA84245.1| hypothetical protein CLOHIR_02101 [Clostridium hiranonis DSM 13275] Length = 633 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A S++ I G + D+G G+ E Sbjct: 39 VYEVVDNSIDEALAGNCSKIYVAINADG--SITVEDDGRGIPVE 80 >gi|187933989|ref|YP_001885394.1| two-component sensor histidine kinase [Clostridium botulinum B str. Eklund 17B] gi|187722142|gb|ACD23363.1| sensor histidine kinase [Clostridium botulinum B str. Eklund 17B] Length = 562 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 30 LIENSL---DAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 L+EN++ + S+ + G + +I+DNG G+ E++P +R Sbjct: 465 LVENAIKYSENGSNVKVISYSKQGNYYLEISDNGLGIPKEDLPRIFERFY 514 >gi|325924529|ref|ZP_08186048.1| DNA topoisomerase IV subunit B [Xanthomonas gardneri ATCC 19865] gi|325545024|gb|EGD16359.1| DNA topoisomerase IV subunit B [Xanthomonas gardneri ATCC 19865] Length = 629 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 15/74 (20%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----IP 69 RP+ +E+I+NS+D A + +VE + G +++D+G GM EE + Sbjct: 31 RPNHLAQEVIDNSVDEALAGHAKQVEVTLFKDG--SCEVSDDGRGMPVDMHPEEKIPGVE 88 Query: 70 MAVQR-HCTSKISD 82 + + R H K ++ Sbjct: 89 LILTRLHAGGKFNN 102 >gi|308234846|ref|ZP_07665583.1| DNA gyrase, B subunit, C-terminal domain protein [Gardnerella vaginalis ATCC 14018] Length = 146 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AES-SRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N++D A + + + G ++ DNG G+ + Sbjct: 46 EIIDNAVDEALAGACDHIIVTLHDDG--SIEVADNGRGIPVD 85 >gi|300727525|ref|ZP_07060916.1| DNA topoisomerase II (N- region) domain protein [Prevotella bryantii B14] gi|299775228|gb|EFI71829.1| DNA topoisomerase II (N- region) domain protein [Prevotella bryantii B14] Length = 654 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 83/283 (29%), Gaps = 35/283 (12%) Query: 27 IKELIENSLD-----AESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT-SKI 80 +KE+I+NS+D A S R+E I + D G G+ ++ AV T K Sbjct: 55 LKEVIDNSIDEFKMKAGS-RIEVDIEDN--LRVSVRDYGRGIPQGKLVEAVSVLNTGGKY 111 Query: 81 SDDFSNIHTFGFRG------EALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 + G G AL S H T+ S + + Sbjct: 112 DSKAFK-KSVGLNGVGVKAVNALSS-----HFTVRSYREGKVREIEFEKGNKISDHTNKS 165 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTF----STIK 190 GT + K+ +++ ++R ++ + + Sbjct: 166 NDENGTFIYFE-------PDNTLFKNYSFHDDIVETMLRNYTYLNSGLTIMYNGCRIHSR 218 Query: 191 SNRYKMNFQSTNGNFPERISQVIGED--FINNAVELNEKSNEITLQGYTGIPTFNRGNAN 248 + + + + I + +D + + G +A Sbjct: 219 NGLEDLLTDNMTVDGLYPIIHMKDDDIEIAFTHTNQYGEEYYSFVNGQHTTQGGTHQSAF 278 Query: 249 QFYVFINGRTVQDKFILSTIRTAYAETIPLG-RYPVVVLLLEI 290 + ++ + +K+ + IR I + PV +I Sbjct: 279 KEHIAKTIKEYFNKYEYTDIRNGLVAAIAINVEEPVFESQTKI 321 >gi|311114491|ref|YP_003985712.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Gardnerella vaginalis ATCC 14019] gi|310945985|gb|ADP38689.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Gardnerella vaginalis ATCC 14019] Length = 786 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AES-SRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N++D A + + + G ++ DNG G+ + Sbjct: 46 EIIDNAVDEALAGACDHIIVTLHDDG--SIEVADNGRGIPVD 85 >gi|298253933|ref|ZP_06977520.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Gardnerella vaginalis 5-1] gi|297532076|gb|EFH71051.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Gardnerella vaginalis 5-1] Length = 796 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AES-SRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N++D A + + + G ++ DNG G+ + Sbjct: 44 EIIDNAVDEALAGACDHIIVTLHDDG--SIEVADNGRGIPVD 83 >gi|297243590|ref|ZP_06927521.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Gardnerella vaginalis AMD] gi|296888341|gb|EFH27082.1| type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [Gardnerella vaginalis AMD] Length = 793 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AES-SRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N++D A + + + G ++ DNG G+ + Sbjct: 44 EIIDNAVDEALAGACDHIIVTLHDDG--SIEVADNGRGIPVD 83 >gi|283783166|ref|YP_003373920.1| DNA gyrase, B subunit, C-terminal domain protein [Gardnerella vaginalis 409-05] gi|283441259|gb|ADB13725.1| DNA gyrase, B subunit, C-terminal domain protein [Gardnerella vaginalis 409-05] Length = 792 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AES-SRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N++D A + + + G ++ DNG G+ + Sbjct: 44 EIIDNAVDEALAGACDHIIVTLHDDG--SIEVADNGRGIPVD 83 >gi|206560857|ref|YP_002231622.1| hypothetical protein BCAL2499 [Burkholderia cenocepacia J2315] gi|198036899|emb|CAR52803.1| conserved hypothetical protein [Burkholderia cenocepacia J2315] Length = 407 Score = 45.0 bits (105), Expect = 0.035, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Query: 13 QIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIP 69 +IA P +A+ EL+ N+ DA +S V+ I + + D+G GM++ + Sbjct: 27 RIA-----HDPEVALTELVANAWDAGASLVDLTIPPTHQLALTVVDDGHGMSAAQFK 78 >gi|303231678|ref|ZP_07318401.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Veillonella atypica ACS-049-V-Sch6] gi|302513627|gb|EFL55646.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Veillonella atypica ACS-049-V-Sch6] Length = 467 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 5/70 (7%) Query: 6 LSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFF-QITDNGFGMT 64 + +I I E+ A+ LI+N++ S + ++TDNG G+ Sbjct: 344 IDSDLI--ITGHEV--SLRRAVTNLIDNAIKFTKSTINITAKRNNLYLIIEVTDNGIGIE 399 Query: 65 SEEIPMAVQR 74 ++ + R Sbjct: 400 ADNLSQIFNR 409 >gi|239980782|ref|ZP_04703306.1| DNA gyrase subunit B [Streptomyces albus J1074] gi|291452640|ref|ZP_06592030.1| DNA topoisomerase subunit B [Streptomyces albus J1074] gi|291355589|gb|EFE82491.1| DNA topoisomerase subunit B [Streptomyces albus J1074] Length = 701 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMT 64 ++E+++NS+D A + ++ I A GG ++ DNG G+ Sbjct: 80 VQEVVDNSVDEALAGHADFIDVTILADGG---VRVIDNGRGIP 119 >gi|16080091|ref|NP_390917.1| two-component sensor histidine kinase [Bacillus subtilis subsp. subtilis str. 168] gi|221310978|ref|ZP_03592825.1| hypothetical protein Bsubs1_16546 [Bacillus subtilis subsp. subtilis str. 168] gi|221315305|ref|ZP_03597110.1| hypothetical protein BsubsN3_16452 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320222|ref|ZP_03601516.1| hypothetical protein BsubsJ_16373 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324504|ref|ZP_03605798.1| hypothetical protein BsubsS_16522 [Bacillus subtilis subsp. subtilis str. SMY] gi|41688441|sp|O35044|BCES_BACSU RecName: Full=Sensor protein BceS gi|2293176|gb|AAC00254.1| signal transduction protein kinase [Bacillus subtilis] gi|2635523|emb|CAB15017.1| two-component sensor histidine kinase controlling resistance to antibiotics affecting the envelope [YtsA] [Bacillus subtilis subsp. subtilis str. 168] Length = 334 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 5/71 (7%) Query: 13 QIAAGEIIER---PSIAIKELIENSLD-AESSRVETV-IAGGGKSFFQITDNGFGMTSEE 67 Q+ A E++ + I++L+ N++ +E+S +E G ++ Q+ D G G+ ++ Sbjct: 208 QLEAKEVLSDAKWLAFIIRQLLTNAVKYSEASEIEIKSFQKGEQTQLQVKDCGRGIDPKD 267 Query: 68 IPMAVQRHCTS 78 +P + TS Sbjct: 268 VPRIFDKGFTS 278 >gi|89092267|ref|ZP_01165221.1| DNA gyrase subunit B [Oceanospirillum sp. MED92] gi|89083355|gb|EAR62573.1| DNA gyrase subunit B [Oceanospirillum sp. MED92] Length = 808 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 34/247 (13%), Positives = 76/247 (30%), Gaps = 25/247 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEEIPMAVQ-----RH 75 E+++NS+D A S ++ +I + DNG G+ EE A + H Sbjct: 46 EVVDNSIDEALAGHCSEIKVIIHPD--ESITVMDNGRGIPTDIHPEEGVSAAEVIMTVLH 103 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV 134 K D+ + + G G + + A+S L + R + + + V Sbjct: 104 AGGKFDDNSYKV-SGGLHGVGVSVVNALSVKLKMTIRRNGQV--HEQVYRHGEPEAPLSV 160 Query: 135 AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRY 194 T + + + + +++ +R ++ V ++ Sbjct: 161 VGETETSGTMVRFW----PSEETFSNVSFKFDILAKRLRELSFLNSGVRIVLKDERTAVE 216 Query: 195 KMNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFI 254 ++ G + + N + +E + +N + F Sbjct: 217 EV--FEYEGGLGAFVEYLNTNKTTVNKLFHFTAEHEASGVAVEVAMQWNDSFQESIHSFT 274 Query: 255 NGRTVQD 261 N +D Sbjct: 275 NNIPQRD 281 >gi|284010229|dbj|BAI66714.1| DNA gyrase B [Borrelia sp. Tortoise14H1] Length = 625 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A ++E VI + ++DNG G+ ++ Sbjct: 28 VYEVVDNSIDEALAGFCDKIEVVINSD--NSITVSDNGRGIPTD 69 >gi|289596495|ref|YP_003483191.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469] gi|289534282|gb|ADD08629.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469] Length = 644 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A SR+ +I G + D+G G+ + Sbjct: 40 EVVDNSIDEALAGYCSRINVIIHKDG--SVSVEDDGRGIPVD 79 >gi|269958766|ref|YP_003328553.1| DNA gyrase subunit B [Anaplasma centrale str. Israel] gi|269848595|gb|ACZ49239.1| DNA gyrase subunit B [Anaplasma centrale str. Israel] Length = 793 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N++D A ++++ VIAG G ITDNG G+ + Sbjct: 41 EVIDNAIDEALAGFCNKIDIVIAGDG--SIAITDNGRGIPID 80 >gi|255003158|ref|ZP_05278122.1| DNA gyrase subunit B (gyrB2) [Anaplasma marginale str. Puerto Rico] gi|255004287|ref|ZP_05279088.1| DNA gyrase subunit B (gyrB2) [Anaplasma marginale str. Virginia] Length = 793 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N++D A ++++ VIAG G ITDNG G+ + Sbjct: 41 EVIDNAIDEALAGFCNKIDIVIAGDG--SIAITDNGRGIPID 80 >gi|254820903|ref|ZP_05225904.1| DNA gyrase subunit B [Mycobacterium intracellulare ATCC 13950] Length = 677 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 13/53 (24%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCT 77 E+++NS+D A +++V+ I G ++ DNG G+ V H T Sbjct: 48 EVVDNSVDEAMAGYANKVDVRILDDG--SVEVADNGRGIP-------VAMHAT 91 >gi|222475176|ref|YP_002563592.1| DNA gyrase subunit B (gyrB2) [Anaplasma marginale str. Florida] gi|222419313|gb|ACM49336.1| DNA gyrase subunit B (gyrB2) [Anaplasma marginale str. Florida] Length = 793 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N++D A ++++ VIAG G ITDNG G+ + Sbjct: 41 EVIDNAIDEALAGFCNKIDIVIAGDG--SIAITDNGRGIPID 80 >gi|254166743|ref|ZP_04873597.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469] gi|197624353|gb|EDY36914.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469] Length = 648 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A SR+ +I G + D+G G+ + Sbjct: 44 EVVDNSIDEALAGYCSRINVIIHKDG--SVSVEDDGRGIPVD 83 >gi|254420686|ref|ZP_05034410.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Brevundimonas sp. BAL3] gi|196186863|gb|EDX81839.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein [Brevundimonas sp. BAL3] Length = 476 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Query: 18 EIIERPSIAIKELIENSLDAESSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHC 76 E++ S L+EN+ D +S V + G I D+G G S+ +P + + Sbjct: 327 EVVHGLST----LVENAADFAASTVRVQALVDAGWIEIAILDDGPGFASDILPRLGEPYV 382 Query: 77 TS 78 TS Sbjct: 383 TS 384 >gi|149190498|ref|ZP_01868768.1| hypothetical protein VSAK1_13621 [Vibrio shilonii AK1] gi|148835622|gb|EDL52589.1| hypothetical protein VSAK1_13621 [Vibrio shilonii AK1] Length = 676 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 22/107 (20%) Query: 23 PSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAV---------- 72 P+ + E+I N+ DA+++ V + K ITD+G GM+ ++I Sbjct: 44 PA-VLTEIISNAWDADANEVAINLDK-EKGEVLITDDGHGMSEDDIKHRFLNVGYARRDD 101 Query: 73 QRHCTSKISDDFSNIHTFGFRGE---ALPSIGAVSHLTLMSRPPQNN 116 +R SK D G +G A+ S+ + + S+ Sbjct: 102 KR---SK--SDSGKRQVMGRKGIGKLAMFSLA--GKIQVTSKKFDTE 141 >gi|56696767|ref|YP_167128.1| C4-dicarboxylate transport sensor protein DctB, putative [Ruegeria pomeroyi DSS-3] gi|56678504|gb|AAV95170.1| C4-dicarboxylate transport sensor protein DctB, putative [Ruegeria pomeroyi DSS-3] Length = 589 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 10/56 (17%) Query: 30 LIENSLDAESSR------VETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N+LDA ++ VE ++A G + + DNG G+ + T+K Sbjct: 487 LLRNALDA--TKSVRDPEVEIILAAGETATLTVRDNGHGIR--NFENIFEPFYTTK 538 >gi|56416812|ref|YP_153886.1| DNA gyrase subunit B [Anaplasma marginale str. St. Maries] gi|254995014|ref|ZP_05277204.1| DNA gyrase subunit B [Anaplasma marginale str. Mississippi] gi|56388044|gb|AAV86631.1| DNA gyrase subunit B [Anaplasma marginale str. St. Maries] Length = 793 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+I+N++D A ++++ VIAG G ITDNG G+ + Sbjct: 41 EVIDNAIDEALAGFCNKIDIVIAGDG--SIAITDNGRGIPID 80 >gi|295115103|emb|CBL35950.1| DNA topoisomerase IV subunit B [butyrate-producing bacterium SM4/1] Length = 639 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + + G + DNG G+ E Sbjct: 42 EIVDNSVDEHLAGECTSIWVTLEADG--SCTVRDNGRGIPVE 81 >gi|238922437|ref|YP_002935950.1| DNA gyrase, B subunit [Eubacterium rectale ATCC 33656] gi|238874109|gb|ACR73816.1| DNA gyrase, B subunit [Eubacterium rectale ATCC 33656] gi|291526542|emb|CBK92129.1| DNA gyrase subunit B [Eubacterium rectale DSM 17629] gi|291529185|emb|CBK94771.1| DNA gyrase subunit B [Eubacterium rectale M104/1] Length = 645 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++N++D A +E I + + D+G G+ Sbjct: 46 VYEIVDNAVDEALAGYCKNIEVTIEED--NSITVQDDGRGIP 85 >gi|283797751|ref|ZP_06346904.1| DNA gyrase, B subunit [Clostridium sp. M62/1] gi|291074426|gb|EFE11790.1| DNA gyrase, B subunit [Clostridium sp. M62/1] Length = 639 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A + + + G + DNG G+ E Sbjct: 42 EIVDNSVDEHLAGECTSIWVTLEADG--SCTVRDNGRGIPVE 81 >gi|254168966|ref|ZP_04875805.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469] gi|197622072|gb|EDY34648.1| DNA gyrase, B subunit [Aciduliprofundum boonei T469] Length = 648 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 E+++NS+D A SR+ +I G + D+G G+ + Sbjct: 44 EVVDNSIDEALAGYCSRINVIIHKDG--SVSVEDDGRGIPVD 83 >gi|182416761|ref|ZP_02948158.1| DNA gyrase, B subunit [Clostridium butyricum 5521] gi|237669641|ref|ZP_04529619.1| DNA gyrase, B subunit [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379418|gb|EDT76913.1| DNA gyrase, B subunit [Clostridium butyricum 5521] gi|237654875|gb|EEP52437.1| DNA gyrase, B subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 637 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 + E+++NS+D A ++E I + + D+G GM Sbjct: 42 VYEIVDNSIDEALAGYCKKIEVNINKD--NSITVIDDGRGMP 81 >gi|78222506|ref|YP_384253.1| histidine kinase [Geobacter metallireducens GS-15] gi|78193761|gb|ABB31528.1| histidine kinase [Geobacter metallireducens GS-15] Length = 341 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 5/81 (6%) Query: 14 IAAGEIIERPSIAIKELIENSL--DAESSRVETVIA-GGGKSFFQITDNGFGMTSEEIPM 70 I+A +E ++ L EN++ + + + G + DNG G+ +++ Sbjct: 219 ISAAIDVEGMETVLRNLFENAILYSIGAPEIRVTLKRDGNRCTLSFQDNGKGIDRKDLKN 278 Query: 71 AVQRHCTSKISDDFSNIHTFG 91 ++ +I I G Sbjct: 279 VFRKFY--RIRSSGEAIRGTG 297 >gi|154246920|ref|YP_001417878.1| putative ATPase [Xanthobacter autotrophicus Py2] gi|154161005|gb|ABS68221.1| putative ATPase [Xanthobacter autotrophicus Py2] Length = 1406 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 47/152 (30%), Gaps = 21/152 (13%) Query: 20 IERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 ++ P + EL++N+ DA +S I F NG E+ ++ H S Sbjct: 49 VQSPRHILSELLQNADDAGASEARVSIEN---DRFVFEHNG-----EDF---IEAHFASI 97 Query: 80 IS---DDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVAM 136 + +HT GFRG IG S +L R +A + + V Sbjct: 98 CRFGYSNKRALHTIGFRG-----IGFKSTFSLGDRVELFTPTLAVAFERTRFTQPHWVDS 152 Query: 137 NPGT--IVEVRDLFFTIPARLNFLKSEQVETN 166 T V K+ Sbjct: 153 RRLTSGTTRVEVAIANPLLCREVEKNLDEWLK 184 >gi|86141195|ref|ZP_01059741.1| DNA gyrase subunit B [Leeuwenhoekiella blandensis MED217] gi|85831754|gb|EAQ50209.1| DNA gyrase subunit B [Leeuwenhoekiella blandensis MED217] Length = 646 Score = 45.0 bits (105), Expect = 0.036, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A ++ +I + + DNG G+ + Sbjct: 44 VYEVVDNSIDEAMAGHCDSIKVIINEN--NSISVKDNGRGIPVD 85 >gi|323137127|ref|ZP_08072206.1| DNA topoisomerase IV, B subunit [Methylocystis sp. ATCC 49242] gi|322397485|gb|EFY00008.1| DNA topoisomerase IV, B subunit [Methylocystis sp. ATCC 49242] Length = 671 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++N++D A ++ +E + GG + +TDNG G+ Sbjct: 65 EVLDNAMDEAVAGHATFIEVTLEPGG--WLTVTDNGRGIP 102 >gi|284161217|ref|YP_003399840.1| DNA gyrase subunit beta [Archaeoglobus profundus DSM 5631] gi|284011214|gb|ADB57167.1| DNA gyrase, B subunit [Archaeoglobus profundus DSM 5631] Length = 632 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 6/46 (13%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSEEIPM 70 E+++NS+D A +R+ + G + + DNG G+ EE P+ Sbjct: 49 EIVDNSIDEALAGYCNRIVVTLHKDGSAS--VEDNGRGIPVEEHPI 92 >gi|260427785|ref|ZP_05781764.1| hypothetical protein CSE45_2882 [Citreicella sp. SE45] gi|260422277|gb|EEX15528.1| hypothetical protein CSE45_2882 [Citreicella sp. SE45] Length = 568 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 5/46 (10%) Query: 25 IAIKELIENSLDAESSRVETVIAGGGKS---FFQ--ITDNGFGMTS 65 A+ E ++NS+ A ++ V G+ + DNG GM Sbjct: 64 SALCEHVDNSIQAGATEVRVYFHQTGQRGAYSIDGLVLDNGRGMEP 109 >gi|255012666|ref|ZP_05284792.1| two-component system sensor histidine kinase [Bacteroides sp. 2_1_7] gi|298374420|ref|ZP_06984378.1| conserved hypothetical protein [Bacteroides sp. 3_1_19] gi|298268788|gb|EFI10443.1| conserved hypothetical protein [Bacteroides sp. 3_1_19] Length = 335 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Query: 30 LIENSLDAE----SSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N+++A S ++ + G + DNG G+ E I T+K Sbjct: 235 LLKNAIEACEESLSPQIVVEAVQKAGMVIISVIDNGSGIVPEAIDKVFVPFFTTK 289 >gi|225569033|ref|ZP_03778058.1| hypothetical protein CLOHYLEM_05112 [Clostridium hylemonae DSM 15053] gi|225161832|gb|EEG74451.1| hypothetical protein CLOHYLEM_05112 [Clostridium hylemonae DSM 15053] Length = 185 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 18/55 (32%), Gaps = 15/55 (27%) Query: 32 ENSLDAESSRVETVIAGGGKSFFQ---------ITDNGFGMTSEEIPMAVQRHCT 77 ENS+ A + + + I DNG GM E++ T Sbjct: 14 ENSIRAGADYITVEV------LISTQADTLTAVIDDNGCGMDEEQVKRVTDPFYT 62 >gi|77917874|ref|YP_355689.1| two component sensor histidine kinase [Pelobacter carbinolicus DSM 2380] gi|77543957|gb|ABA87519.1| GAF sensor signal transduction histidine kinase [Pelobacter carbinolicus DSM 2380] Length = 556 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 10/60 (16%) Query: 30 LIENSLDA-----ESSRVETV--IAGGGKS---FFQITDNGFGMTSEEIPMAVQRHCTSK 79 L+ N+ DA +E G + DNG G+ ++ + TSK Sbjct: 445 LLINARDALGGVDREKTIEVRSYAEDNGDGQWIIISVKDNGIGIPAKNLQRVFTPFYTSK 504 >gi|37527805|ref|NP_931150.1| DNA topoisomerase IV subunit B [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787241|emb|CAE16322.1| topoisomerase IV subunit B [Photorhabdus luminescens subsp. laumondii TTO1] Length = 631 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 77/208 (37%), Gaps = 23/208 (11%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT----SEE----I 68 RP+ +E+I+NS+D A + +E ++ ++ D+G GM EE + Sbjct: 31 TRPNHLAQEVIDNSVDEALAGHAKHIEVILHSD--QSLEVIDDGRGMPVDIHPEEGVSAV 88 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQNNTGAQIAISGE 126 + + R H K S+ + G G + + A+S + + R ++ QIA Sbjct: 89 ELILSRLHAGGKFSNKNYQ-FSGGLHGVGISVVNALSKRIEVTVRR--DSQIYQIAFENG 145 Query: 127 KISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS--F 184 V + G + F P +F S + + +T +++ A+ P V F Sbjct: 146 DKVQELTVIGSCGKRNTGTGVHF-WP-DESFFDSPRFSVSRLTHLLKAKAVLCPGVEIVF 203 Query: 185 TFSTIKSNRYKMNFQSTNGNFPERISQV 212 + + ++ + Sbjct: 204 KDKINGTEQKWCYADGLTDYLMAAVNGL 231 >gi|13471897|ref|NP_103464.1| heat shock protein 90 [Mesorhizobium loti MAFF303099] gi|17865487|sp|Q98JB6|HTPG_RHILO RecName: Full=Chaperone protein htpG; AltName: Full=Heat shock protein htpG; AltName: Full=High temperature protein G gi|14022641|dbj|BAB49250.1| heat shock protein; HtpG [Mesorhizobium loti MAFF303099] Length = 628 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 39/147 (26%) Query: 27 IKELIENSLDAESS------------------RVETVIAGGGKSFFQITDNGFGMTSEEI 68 ++ELI N+ DA R+ K + DNG GM+ +++ Sbjct: 36 LRELISNAADACEKLRFEAVSRPELLGDDPKPRISISADPDNKE-ITVEDNGIGMSRDDM 94 Query: 69 PMAV---QRHCT--------SKISDDFSNIHTF--GFRGEALPSIGAVS-HLTLMSRPPQ 114 A+ R T S ++D I F GF S V+ + ++SR Sbjct: 95 AEALGTIARSGTRAFIERVGS-GTEDTQLIGQFGVGF-----YSAFMVADRVDVISRLAG 148 Query: 115 NNTGAQIAISGEKISSVRPVAMNPGTI 141 + + + G+ + P + Sbjct: 149 SEEAWRWSSDGKGSYEIAPAPLEAAPR 175 >gi|23100706|ref|NP_694173.1| two-component sensor histidine kinase [Oceanobacillus iheyensis HTE831] gi|22778940|dbj|BAC15207.1| two-component sensor histidine kinase [Oceanobacillus iheyensis HTE831] Length = 528 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Query: 31 IENSLDA----ESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTSK 79 I+N+ DA ++ +++ + G ++ DNG G++ + +++ ++K Sbjct: 428 IDNAFDAVVNTDNPKIDIFLTDMGNDLVIEVADNGTGISPADYDNIMKQGYSTK 481 >gi|89101114|ref|ZP_01173950.1| DNA topoisomerase IV subunit B [Bacillus sp. NRRL B-14911] gi|89084169|gb|EAR63334.1| DNA topoisomerase IV subunit B [Bacillus sp. NRRL B-14911] Length = 640 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 6/40 (15%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMT 64 E+++NS+D A S + +I + + D+G G+ Sbjct: 47 EIVDNSIDEALAGYCSEINVIIEKD--NSITVVDDGRGIP 84 >gi|84501601|ref|ZP_00999773.1| DNA topoisomerase IV, B subunit [Oceanicola batsensis HTCC2597] gi|84390222|gb|EAQ02781.1| DNA topoisomerase IV, B subunit [Oceanicola batsensis HTCC2597] Length = 652 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 8/45 (17%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A ++R+E + + + DNG GM + Sbjct: 48 VAEILDNSMDEAVAGHATRIEVELHEDYSLT---VRDNGRGMPFD 89 >gi|218708460|ref|YP_002416081.1| DNA topoisomerase IV subunit B [Vibrio splendidus LGP32] gi|218321479|emb|CAV17431.1| Topoisomerase IV subunit B [Vibrio splendidus LGP32] Length = 626 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 78/208 (37%), Gaps = 29/208 (13%) Query: 21 ERPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE--------EI 68 ERP+ +E+I+NS+D A + +++ V+ ++TD+G GM + + Sbjct: 30 ERPNHLAQEVIDNSVDEALAGHAKKIKVVLHAD--QSLEVTDDGRGMPVDIHPEKGISGV 87 Query: 69 PMAVQR-HCTSKISDDFSNIHTFGFRGEALPSIGAVS-HLTLMSRPPQN--NTGAQIAIS 124 + + + H K S++ + G G + + A+S + + R + + Sbjct: 88 ELILTKLHSGGKFSNNNYK-FSGGLHGVGISVVNALSKRVEVTVRRDGQVHEIALEGGHA 146 Query: 125 GEKISSVRPV-AMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVS 183 ++ N GT V + S + T + + +R A+ P + Sbjct: 147 VTDLTVTGTCGHRNTGTTVHFW-------PDPKYFDSSKFSTLRLINNLRAKAVLCPGLE 199 Query: 184 FTFSTIKSNRYKMNFQSTNGNFPERISQ 211 TF + + + + +++ Sbjct: 200 ITF--VDKVGGEEHKWFYEDGLKDYLAE 225 >gi|167901109|ref|ZP_02488314.1| C4-dicarboxylate transport sensor histidine kinase DctB [Burkholderia pseudomallei NCTC 13177] Length = 667 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAESS----RVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA ++ R++ I + + DNG G+ E + + Sbjct: 551 RLEQVLINLLGNALDAVAAVAAPRIDVAIDATAATLAITVRDNGPGIAPESLARLFEPFF 610 Query: 77 TSK 79 T+K Sbjct: 611 TTK 613 >gi|150020807|ref|YP_001306161.1| histidine kinase [Thermosipho melanesiensis BI429] gi|149793328|gb|ABR30776.1| histidine kinase [Thermosipho melanesiensis BI429] Length = 176 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 6/54 (11%) Query: 32 ENSLDAESSRVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHCTS---KIS 81 ENS+ A + V I K F F + D+G G+ +++ TS KI Sbjct: 15 ENSIKAGAKNVILEIYETDKEFTFVVRDDGPGI--KDLNEVFDPFYTSRDKKIR 66 >gi|90415523|ref|ZP_01223457.1| DNA topoisomerase IV subunit B [marine gamma proteobacterium HTCC2207] gi|90332846|gb|EAS48016.1| DNA topoisomerase IV subunit B [marine gamma proteobacterium HTCC2207] Length = 630 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 6/49 (12%) Query: 22 RPSIAIKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 RP+ +E+I+NS+D A +SR++ + G + D+G GM + Sbjct: 30 RPNHLAQEVIDNSVDEALAGHASRIDVTLHKDG--SLSVCDDGRGMPVD 76 >gi|53718065|ref|YP_107051.1| C4-dicarboxylate transport sensor protein [Burkholderia pseudomallei K96243] gi|52208479|emb|CAH34414.1| C4-dicarboxylate transport sensor protein [Burkholderia pseudomallei K96243] Length = 677 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAESS----RVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA ++ R++ I + + DNG G+ E + + Sbjct: 561 RLEQVLINLLGNALDAVAAVAAPRIDVAIDATAATLAITVRDNGPGIAPESLARLFEPFF 620 Query: 77 TSK 79 T+K Sbjct: 621 TTK 623 >gi|134292288|ref|YP_001116024.1| histidine kinase [Burkholderia vietnamiensis G4] gi|134135445|gb|ABO56559.1| histidine kinase [Burkholderia vietnamiensis G4] Length = 628 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 19/93 (20%) Query: 2 KIR----KLSEKIINQIAAGEII--ER--PSIAIKELIENSLDA--ES--SRVETVI--- 46 +IR +L +N IA G + E I L+ N+LDA ++ R+ Sbjct: 487 RIRDEGVQLD---VN-IAPGTTVSAESSQLQQVIVNLLGNALDAVRDAPVRRIVIEASGP 542 Query: 47 AGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 G+ + D+G G+ + +P + T+K Sbjct: 543 DDAGRVRLTVADSGAGIAPDVLPHLFEPFVTTK 575 >gi|305432569|ref|ZP_07401730.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Campylobacter coli JV20] gi|304444280|gb|EFM36932.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Campylobacter coli JV20] Length = 770 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 36/241 (14%), Positives = 83/241 (34%), Gaps = 26/241 (10%) Query: 29 ELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGM-----TSEEIP----MAVQRH 75 E+++NS+D A ++ I G ++DNG G+ +E +P + H Sbjct: 41 EVVDNSIDEAMAGHCDTIDIEITTEG--SCIVSDNGRGIPVDMHPTENMPTLTVVLTVLH 98 Query: 76 CTSKISDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGAQIAISGEKISSVRPVA 135 K D + + G G + + A+S + + Q G+ IS + Sbjct: 99 AGGKFDKDTYKV-SGGLHGVGVSVVNALSKKLIATVERNGEIYRQEFSEGKVISEFGVIG 157 Query: 136 MNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIAYPKVSFTFSTIKSNRYK 195 + T + + + +++ R +A PK++ F + K Sbjct: 158 KSKKTGTTIEFWPDDTIFEVTEF-----DYDILAKRFRELAYLNPKITINFK--DNRVGK 210 Query: 196 MNFQSTNGNFPERISQVIGEDFINNAVELNEKSNEITLQGYTGIPTFNRGNANQFYVFIN 255 G + +S + ++ + + + ++ ++ +N + F+N Sbjct: 211 SESFHFEGGISQFVSDLNKKEALTKPIFFSVDEEDVNVEVAL---LYNDTYSENLLSFVN 267 Query: 256 G 256 Sbjct: 268 N 268 >gi|262382638|ref|ZP_06075775.1| two-component system sensor histidine kinase [Bacteroides sp. 2_1_33B] gi|262295516|gb|EEY83447.1| two-component system sensor histidine kinase [Bacteroides sp. 2_1_33B] Length = 335 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Query: 30 LIENSLDAE----SSRVETV-IAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 L++N+++A S ++ + G + DNG G+ E I T+K Sbjct: 235 LLKNAIEACEESLSPQIVVEAVQKAGMVIISVIDNGSGIVPEAIDKVFVPFFTTK 289 >gi|311742169|ref|ZP_07715979.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Aeromicrobium marinum DSM 15272] gi|311314662|gb|EFQ84569.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Aeromicrobium marinum DSM 15272] Length = 666 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 8/49 (16%) Query: 27 IKELIENSLD---AE-SSRVETVI-AGGGKSFFQITDNGFGMTSEEIPM 70 + E+++NS+D A +S +E + A GG + D+G G+ +E P+ Sbjct: 49 VYEVVDNSVDEALAGHASHIEVTLLADGGVK---VVDDGRGIPVDEHPI 94 >gi|257051220|ref|YP_003129053.1| DNA gyrase, B subunit [Halorhabdus utahensis DSM 12940] gi|256689983|gb|ACV10320.1| DNA gyrase, B subunit [Halorhabdus utahensis DSM 12940] Length = 637 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++N++D A +E I G +TD+G G+ + Sbjct: 41 VYEVVDNAIDEALAGHCDHIEVTIHDDG--SVSVTDDGRGIPID 82 >gi|223945509|gb|ACN26838.1| unknown [Zea mays] Length = 771 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 11/71 (15%) Query: 29 ELIENSLDA---ESSRVETVI---AGGGKSFFQITDNGFGMTSEEIPMAVQRHCT--SKI 80 EL++NSLD ++ V + G + DNG GM +++ + + SK+ Sbjct: 141 ELLDNSLDEVVHGATYVNIDMIESKKDGTPMLLVQDNGGGMNPDKMRHCMSLGYSAKSKV 200 Query: 81 SDDFSNIHTFG 91 + I +G Sbjct: 201 KN---TIGQYG 208 >gi|254381188|ref|ZP_04996553.1| chaperone protein htpG [Streptomyces sp. Mg1] gi|194340098|gb|EDX21064.1| chaperone protein htpG [Streptomyces sp. Mg1] Length = 643 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 45/166 (27%) Query: 19 IIERPSI----AIKELIENSLDA----------ESS--------RVETVIAGGGKSFFQI 56 +I ++ELI N+ DA S + + ++ + Sbjct: 26 VIHSIYSNKDIFLRELISNASDALDKLRLESLTGSLAGVDISDLHISLEVDSDARTL-TV 84 Query: 57 TDNGFGMTSEEIPMAVQRHCTS-------KISD--DFSNIHTF------GFRGEALPSIG 101 DNG GMT +++ + S KI + D + + GF S Sbjct: 85 RDNGIGMTRDDLVELIGTIAKSGTAGLLEKIKESKDAATTESLIGQFGVGF-----YSAF 139 Query: 102 AVS-HLTLMSRPPQNNTGAQIAISGEKISSVRPV-AMNPGTIVEVR 145 V+ +T+ +R ++G Q GE +++ + GT V + Sbjct: 140 MVADKVTVHTRRAGTDSGTQWESDGEGSYTIQAADDLPVGTSVTLH 185 >gi|167717885|ref|ZP_02401121.1| C4-dicarboxylate transport sensor histidine kinase DctB [Burkholderia pseudomallei DM98] Length = 658 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 22 RPSIAIKELIENSLDAESS----RVETVIAGGGKSF-FQITDNGFGMTSEEIPMAVQRHC 76 R + L+ N+LDA ++ R++ I + + DNG G+ E + + Sbjct: 542 RLEQVLINLLGNALDAVAAVAAPRIDVAIDATAATLAITVRDNGPGIAPESLARLFEPFF 601 Query: 77 TSK 79 T+K Sbjct: 602 TTK 604 >gi|150021689|ref|YP_001307043.1| histidine kinase [Thermosipho melanesiensis BI429] gi|149794210|gb|ABR31658.1| histidine kinase [Thermosipho melanesiensis BI429] Length = 319 Score = 45.0 bits (105), Expect = 0.037, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 3/40 (7%) Query: 40 SRVETVIAGGGKSFFQITDNGFGMTSEEIPMAVQRHCTSK 79 S + ++ K + DNG G+ E+I +R SK Sbjct: 240 STIYIIVD---KESITVKDNGIGIKKEDIKKVTERFYRSK 276 >gi|325288206|ref|YP_004264387.1| DNA gyrase subunit B [Syntrophobotulus glycolicus DSM 8271] gi|324963607|gb|ADY54386.1| DNA gyrase subunit B [Syntrophobotulus glycolicus DSM 8271] Length = 645 Score = 45.0 bits (105), Expect = 0.038, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 6/44 (13%) Query: 27 IKELIENSLD---AE-SSRVETVIAGGGKSFFQITDNGFGMTSE 66 + E+++NS+D A VE I + + DNG G+ + Sbjct: 52 VYEIVDNSIDEAMAGFCDNVEVTIHND--NSITVKDNGRGIPVD 93 >gi|319403540|emb|CBI77121.1| two-component sensor kinase BatS [Bartonella rochalimae ATCC BAA-1498] Length = 555 Score = 45.0 bits (105), Expect = 0.038, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 10/63 (15%) Query: 22 RPSIAIKELIENSLDAES------SRVETVIAGGGKSFF-QITDNGFGMTSEEIPMAVQR 74 R I LIEN A S ++ + + + DNG G+ SE I +R Sbjct: 439 RLGQVISNLIEN---ARSFVPRKNGKICITMKNNASNLILTVEDNGPGICSENIERIFER 495 Query: 75 HCT 77 T Sbjct: 496 FYT 498 >gi|237712366|ref|ZP_04542847.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229453687|gb|EEO59408.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 477 Score = 45.0 bits (105), Expect = 0.038, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 6/70 (8%) Query: 13 QIAAGEIIERP---SIAIKELIENSLDAESSRVETV---IAGGGKSFFQITDNGFGMTSE 66 ++ + +I P + I LIEN++