RPSBLAST alignment for GI: 254780399 and conserved domain: cd03483

>gnl|CDD|48471 cd03483, MutL_Trans_MLH1, MutL_Trans_MLH1: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to yeast and human MLH1 (MutL homologue 1). This transducer domain is homologous to the second domain of the DNA gyrase B subunit, which is known to be important in nucleotide hydrolysis and the transduction of structural signals from ATP-binding site to the DNA breakage/reunion regions of the enzymes. MLH1 forms heterodimers with PMS2, PMS1 and MLH3. These three complexes have distinct functions in meiosis. hMLH1-hPMS2 also participates in the repair of all DNA mismatch repair (MMR) substrates. Roles for hMLH1-hPMS1 or hMLH1-hMLH3 in MMR have not been established. Cells lacking hMLH1 have a strong mutator phenotype and display microsatellite instability (MSI). Mutation in hMLH1 causes predisposition to HNPCC, Muir-Torre syndrome and Turcot syndrome (HNPCC variant). Mutation in hMLH1 accounts for a large fraction of HNPCC families.. Length = 127
 Score = 70.2 bits (172), Expect = 1e-12
 Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 9/127 (7%)

Query: 207 ERISQVIGEDFINNAVELNEKSNEITL----QGYTGIPTFNRGNANQFYVFINGRTVQDK 262
           + I  V G    N  +E+    ++  L    +G      ++      F +FIN R V+  
Sbjct: 4   DNIRSVYGAAVANELIEVEISDDDDDLGFKVKGLISNANYS-KKKIIFILFINNRLVECS 62

Query: 263 FILSTIRTAYAETIPLGRYPVVVLLLEIDPRQVDVNVHPAKSYIRFRNPTIIRNFIIQSI 322
            +   I   YA  +P G +P V L LEI P  VDVNVHP K  + F N       II+ I
Sbjct: 63  ALRRAIENVYANYLPKGAHPFVYLSLEIPPENVDVNVHPTKREVHFLNEEE----IIERI 118

Query: 323 QKAINKK 329
           QK +  K
Sbjct: 119 QKLVEDK 125