RPSBLAST alignment of GI: 254780399 and protein with PDBid: 3na3

>3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens} Length = 348

 Score =  297 bits (762), Expect = 4e-81
 Identities = 110/337 (32%), Positives = 177/337 (52%), Gaps = 9/337 (2%)

Query: 2   KIRKLSEKIINQIAAGEIIERPSIAIKELIENSLDAESSRVETVIAGGGKSFFQITDNGF 61
            IR+L E ++N+IAAGE+I+RP+ AIKE+IEN LDA+S+ ++ ++  GG    QI DNG 
Sbjct: 8   VIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGT 67

Query: 62  GMTSEEIPMAVQRHCTSKI--SDDFSNIHTFGFRGEALPSIGAVSHLTLMSRPPQNNTGA 119
           G+  E++ +  +R  TSK+   +D ++I T+GFRGEAL SI  V+H+T+ ++        
Sbjct: 68  GIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGEALASISHVAHVTITTKTADGKCAY 127

Query: 120 Q-IAISGEKISSVRPVAMNPGTIVEVRDLFFTIPARLNFLKSEQVETNLITDVIRRMAIA 178
           +     G+  +  +P A N GT + V DLF+ I  R   LK+   E   I +V+ R ++ 
Sbjct: 128 RASYSDGKLKAPPKPCAGNQGTQITVEDLFYNIATRRKALKNPSEEYGKILEVVGRYSVH 187

Query: 179 YPKVSFTFSTIKSNRYKMNFQST-NGNFPERISQVIGEDFINNAVELN--EKSNEITLQG 235
              +SF+    K      + ++  N +  + I  + G       +E+   +K+    + G
Sbjct: 188 NAGISFSV--KKQGETVADVRTLPNASTVDNIRSIFGNAVSRELIEIGCEDKTLAFKMNG 245

Query: 236 YTGIPTFNRGNANQFYVFINGRTVQDKFILSTIRTAYAETIPLGRYPVVVLLLEIDPRQV 295
           Y     ++      F +FIN R V+   +   I T YA  +P   +P + L LEI P+ V
Sbjct: 246 YISNANYSVKK-CIFLLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLSLEISPQNV 304

Query: 296 DVNVHPAKSYIRFRNPTIIRNFIIQSIQKAINKKGIS 332
           DVNVHP K  + F +   I   + Q I+  +     S
Sbjct: 305 DVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSS 341