HHsearch alignment for GI: 254780401 and conserved domain: CHL00181

Probab=92.51  E-value=0.62  Score=27.30  Aligned_cols=87  Identities=17%  Similarity=0.225  Sum_probs=48.6

Q ss_pred             HHHHHCCC-CCCCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHH
Q ss_conf             99740464-33889889982300078887489999999985247315987604578777755871456788770421233
Q gi|254780401|r   32 KLMKRGQR-LHAPIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLL  110 (338)
Q Consensus        32 ~~~~~~~~-~~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~l  110 (338)
T Consensus        47 ~R~~~Gl~~~~~s~h~vF~GnP---GTGKTTVARl~a~il~~lG----~L~~g~-------vve~~r~d---Lvg-----  104 (287)
T CHL00181         47 LRKNLGLVSSSPGLHMSFTGSP---GTGKTTVALKMADILYRLG----YIKKGH-------LITVTRDD---LVG-----  104 (287)
T ss_pred             HHHHCCCCCCCCCCEEEEECCC---CCCHHHHHHHHHHHHHHCC----CCCCCE-------EEEECHHH---HCC-----
T ss_conf             9998799988876538887899---8679999999999999869----955895-------89953588---416-----


Q ss_pred             HHHCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf             220576346520122566410245747997183223
Q gi|254780401|r  111 LARRAVTIVTSDRKIGVQMLLQEGVDIIIMDDGFHS  146 (338)
Q Consensus       111 la~~~pv~V~~~R~~~~~~~~~~~~diiIlDDGfQh  146 (338)
T Consensus       105 ------~yvG~Ta~kt~~~i~~a~GGVLfIDEAY~L  134 (287)
T CHL00181        105 ------QYIGHTAPKTKEVLKKAMGGVLFIDEAYYL  134 (287)
T ss_pred             ------CCCCCCHHHHHHHHHHCCCCEEEEECHHHH
T ss_conf             ------353521699999999645987998244653