HHsearch alignment for GI: 254780401 and conserved domain: COG4098

>COG4098 comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair].
Probab=92.23  E-value=0.18  Score=31.08  Aligned_cols=29  Identities=17%  Similarity=0.223  Sum_probs=25.3

Q ss_pred             EECCCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             00788874899999999852473159876
Q gi|254780401|r   53 VMGGTGKTPTALAIAKAVIDKNLKPGFLS   81 (338)
Q Consensus        53 tvGGtGKTP~v~~l~~~l~~~g~~~~ils   81 (338)
T Consensus       123 AV~GaGKTEMif~~i~~al~~G~~vciAS  151 (441)
T COG4098         123 AVTGAGKTEMIFQGIEQALNQGGRVCIAS  151 (441)
T ss_pred             EECCCCCHHHHHHHHHHHHHCCCEEEEEC
T ss_conf             74279851016999999996598699846