HHsearch alignment for GI: 254780401 and conserved domain: KOG0342
>KOG0342 consensus.
Probab=94.23 E-value=0.57 Score=27.56 Aligned_cols=222 Identities=17% Similarity=0.173 Sum_probs=107.5
Q ss_pred ECCCCCC-----HHHHHHHHHHHHC--CCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHH-HHHHC----CCCCCCC
Q ss_conf 0788874-----8999999998524--731598760457877775587145678877042123-32205----7634652
Q gi|254780401|r 54 MGGTGKT-----PTALAIAKAVIDK--NLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPL-LLARR----AVTIVTS 121 (338)
Q Consensus 54 vGGtGKT-----P~v~~l~~~l~~~--g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~-lla~~----~pv~V~~ 121 (338)
T Consensus 127 KTGtGKTlAFLiPaie~l~k~~~~~r~~~~v--------------lIi~PTRELA~Q~~~eak~Ll~~h~~~~v~~viGG 192 (543)
T KOG0342 127 KTGTGKTLAFLLPAIELLRKLKFKPRNGTGV--------------LIICPTRELAMQIFAEAKELLKYHESITVGIVIGG 192 (543)
T ss_pred CCCCCCEEEEHHHHHHHHHHCCCCCCCCEEE--------------EEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 2688741010468999998536577787148--------------99656289999899999999972767734787677
Q ss_pred CHHH-HHHHHCCCCCCEEEE-----CCCCCCCC--CCCEEEEEEECCCCCCCCCCCCCCHHHHHCCHH------------
Q ss_conf 0122-566410245747997-----18322344--123069999618433566553761365210025------------
Q gi|254780401|r 122 DRKI-GVQMLLQEGVDIIIM-----DDGFHSAD--LQADFSLIVVNSHRGLGNGLVFPAGPLRVPLSR------------ 181 (338)
Q Consensus 122 ~R~~-~~~~~~~~~~diiIl-----DDGfQh~~--l~rdl~Ivl~d~~~~~gn~~llPaGpLREp~~~------------ 181 (338)
T Consensus 193 ~~~~~e~~kl~k-~~niliATPGRLlDHlqNt~~f~~r~~k~lvlDEA-----DrlLd~GF~~d-i~~Ii~~lpk~rqt~ 265 (543)
T KOG0342 193 NNFSVEADKLVK-GCNILIATPGRLLDHLQNTSGFLFRNLKCLVLDEA-----DRLLDIGFEED-VEQIIKILPKQRQTL 265 (543)
T ss_pred CCCHHHHHHHHC-CCCEEEECCCHHHHHHHCCCCCHHHCCCEEEEECC-----HHHHHCCCHHH-HHHHHHHCCCCCCEE
T ss_conf 410589997515-55278867841776765578412212203575020-----35665251888-999987523553046
Q ss_pred ----------------HHHHHHHHHHCCCCHHH---HHHHCCCCHHH-----HHHHHC-CCCCCCCCEEEEEECCCCHHH
Q ss_conf ----------------56651454420441245---77631350111-----222201-321116863898741553578
Q gi|254780401|r 182 ----------------QLSYVDAILYVGNKKNV---ISSIKNKSVYF-----AKLKPR-LTFDLSGKKVLAFSGIADTEK 236 (338)
Q Consensus 182 ----------------~l~rad~vi~~~~~~~~---~~~~~~~~i~~-----~~~~~~-~~~~l~~k~v~afsGIa~P~~ 236 (338)
T Consensus 266 LFSAT~~~kV~~l~~~~L~~-d~~~v~~~d~~~~~The~l~Qgyvv~~~~~~f~ll~~~LKk~~~~~KiiVF~sT~~~vk 344 (543)
T KOG0342 266 LFSATQPSKVKDLARGALKR-DPVFVNVDDGGERETHERLEQGYVVAPSDSRFSLLYTFLKKNIKRYKIIVFFSTCMSVK 344 (543)
T ss_pred EEECCCCHHHHHHHHHHHCC-CCEEEECCCCCCCCHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHH
T ss_conf 76478968899999876337-74686247899730232466407962654117999999997347724999933026799
Q ss_pred HHHHHHH-HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEECHHHHHHCCCCCCCCHHHHCCEEEEEEEE
Q ss_conf 9998874-0100001221433234898999999997564-798799854663438233344111220517887698
Q gi|254780401|r 237 FFTTVRQ-LGALIEQCYSFGDHAHLSDKKIAYLLDQAQQ-KGLILVTTAKDAMRLHKRPGRAEEIFAKSMVIEVDI 310 (338)
Q Consensus 237 F~~~L~~-~g~~i~~~~~fpDHh~ys~~dl~~i~~~a~~-~~~~iiTTEKD~VKL~~~~~~~~~l~~~~~~l~i~~ 310 (338)
T Consensus 345 ~~~~lL~~~dlpv-----~eiHgk~~Q~kRT~~~~~F~kaesgIL~cTDVaARG--------lD~P~V~~VvQ~~~ 407 (543)
T KOG0342 345 FHAELLNYIDLPV-----LEIHGKQKQNKRTSTFFEFCKAESGILVCTDVAARG--------LDIPDVDWVVQYDP 407 (543)
T ss_pred HHHHHHHHCCCCH-----HHHHCCCCCCCCCHHHHHHHHCCCCEEEECCHHHCC--------CCCCCCEEEEEECC
T ss_conf 9999985068753-----244257853220238998861066439960322136--------88888407998589