HHsearch alignment for GI: 254780401 and conserved domain: KOG2743

Probab=93.10  E-value=0.13  Score=31.99  Aligned_cols=146  Identities=23%  Similarity=0.269  Sum_probs=89.0

Q ss_pred             CCCCCEE-EECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC--CCCEEEECCCCCHHHHCCHHHHHHHCCCC
Q ss_conf             3889889-98230007888748999999998524731598760457877--77558714567887704212332205763
Q gi|254780401|r   41 HAPIPVI-CVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKS--RISFRVDLEKHSAYDVGDEPLLLARRAVT  117 (338)
Q Consensus        41 ~~~~pVI-~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~--~~~~~v~~~~~~~~~vGDEp~lla~~~pv  117 (338)
T Consensus        54 ~~rIPvtIITGyL---GaGKtTLLn~Il~--~~hgKRIAVIlNEfGes~die~sl~~~~---~gg~lyEewv~L~NGClC  125 (391)
T KOG2743          54 GARIPVTIITGYL---GAGKTTLLNYILT--GQHGKRIAVILNEFGESSDIEKSLAVSQ---EGGELYEEWVELRNGCLC  125 (391)
T ss_pred             CCCCCEEEEEECC---CCCHHHHHHHHHC--CCCCCEEEEEHHHCCCCHHHHHHHHHCC---CCCHHHHHHHHHCCCEEE
T ss_conf             8844439997314---6786899999971--6788559997010365011467777503---441579999986488089


Q ss_pred             C-CCCCHHHHHHHHCC-C-CCCEEEE-CCCCC-----------CCCCCCE----EEEEEECCCCCC-CCCCCCCCHHHHH
Q ss_conf             4-65201225664102-4-5747997-18322-----------3441230----699996184335-6655376136521
Q gi|254780401|r  118 I-VTSDRKIGVQMLLQ-E-GVDIIIM-DDGFH-----------SADLQAD----FSLIVVNSHRGL-GNGLVFPAGPLRV  177 (338)
Q Consensus       118 ~-V~~~R~~~~~~~~~-~-~~diiIl-DDGfQ-----------h~~l~rd----l~Ivl~d~~~~~-gn~~llPaGpLRE  177 (338)
T Consensus       126 CtVk~~gvraie~lvqkkGkfD~IllETTGlAnPaPia~~Fw~dd~l~sdVkLDGIVTvvD~K~~~~~Lde~k~~g~i~E  205 (391)
T KOG2743         126 CTVKDNGVRAIENLVQKKGKFDHILLETTGLANPAPIASMFWLDDELGSDVKLDGIVTVVDAKHILKHLDEEKPDGLINE  205 (391)
T ss_pred             EEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEHHHHHHHHCCCCCCCCHHH
T ss_conf             98543089999999846787646999604788827788887644654674043038999743668865312586541578


Q ss_pred             CCHHHHHHHHHHHHCCCC
Q ss_conf             002556651454420441
Q gi|254780401|r  178 PLSRQLSYVDAILYVGNK  195 (338)
Q Consensus       178 p~~~~l~rad~vi~~~~~  195 (338)
T Consensus       206 A~-~QiA~AD~II~NKtD  222 (391)
T KOG2743         206 AT-RQIALADRIIMNKTD  222 (391)
T ss_pred             HH-HHHHHHHEEEECCCC
T ss_conf             88-887541135640435