HHsearch alignment for GI: 254780401 and conserved domain: PRK13705
>PRK13705 plasmid-partitioning protein SopA; Provisional.
Probab=96.15 E-value=0.014 Score=39.01 Aligned_cols=40 Identities=28% Similarity=0.325 Sum_probs=35.6
Q ss_pred CCCCCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 38898899823000788874899999999852473159876
Q gi|254780401|r 41 HAPIPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLS 81 (338)
Q Consensus 41 ~~~~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ils 81 (338)
T Consensus 103 g~~~~VIAVaNq-KGGvGKTTTavnLA~~LAl~G~RVLlID 142 (388)
T PRK13705 103 DEFPPVIGVAAH-KGGVYKTSVSVHLAQDLALKGLRVLLVE 142 (388)
T ss_pred CCCCEEEEEECC-CCCCCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 998728999527-8885599999999999997799089995