HHsearch alignment for GI: 254780401 and conserved domain: TIGR00345
>TIGR00345 arsA arsenite-activated ATPase (arsA); InterPro: IPR003348 This ATPase is involved in the removal of arsenate, antimonite, and arsenate from the cell. In Escherichia coli an anion-translocating ATPase has been identified as the product of the arsenical resistance operon of resistance plasmid R773. This ATP-driven oxyanion pump catalyses extrusion of the oxyanions arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance . The ArsA and ArsB proteins form a membrane-bound pump that functions as an oxyanion-translocating ATPase. The ArsC protein is an arsenate reductase that reduces arsenate to arsenite, which is subsequently pumped out of the cell .; GO: 0005524 ATP binding, 0006820 anion transport, 0016020 membrane.
Probab=91.01 E-value=0.2 Score=30.72 Aligned_cols=182 Identities=17% Similarity=0.266 Sum_probs=87.6
Q ss_pred CCCCCCHHHHHHHHHHHHC--CCCEEEEEECCCCCCCCCEEEECCCC----CHHHHCCHHHHHH--HCC------C-CC-
Q ss_conf 7888748999999998524--73159876045787777558714567----8877042123322--057------6-34-
Q gi|254780401|r 55 GGTGKTPTALAIAKAVIDK--NLKPGFLSRGYGRKSRISFRVDLEKH----SAYDVGDEPLLLA--RRA------V-TI- 118 (338)
Q Consensus 55 GGtGKTP~v~~l~~~l~~~--g~~~~ilsRGYg~~~~~~~~v~~~~~----~~~~vGDEp~lla--~~~------p-v~- 118 (338)
T Consensus 6 GGVGKTt~SaAtA~~lAe~qPGkkvLl~ST------------DPAHsL~D~F~~e~G~~~~kv~g~eNL~~~EIDp~~al 73 (330)
T TIGR00345 6 GGVGKTTISAATAIRLAEQQPGKKVLLVST------------DPAHSLSDVFEQELGHEPTKVKGVENLSAVEIDPQAAL 73 (330)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEEEEEE------------CCCHHHHHHHHHHHCCCCCEEECCCCCEEEEECHHHHH
T ss_conf 882388899999999985189977999840------------86002788611321777303205898555510378999
Q ss_pred ----------------CCCCH------HHHHHHHCC------CCCC-EEEECCCCCCCCC---CC--EEEEEEECCCCCC
Q ss_conf ----------------65201------225664102------4574-7997183223441---23--0699996184335
Q gi|254780401|r 119 ----------------VTSDR------KIGVQMLLQ------EGVD-IIIMDDGFHSADL---QA--DFSLIVVNSHRGL 164 (338)
Q Consensus 119 ----------------V~~~R------~~~~~~~~~------~~~d-iiIlDDGfQh~~l---~r--dl~Ivl~d~~~~~ 164 (338)
T Consensus 74 ~~y~~rvf~~~~~i~~~~~~~~~~~l~~ql~~~~~~dltGsiPGiDE~~~F~~~~k~~~~~~~~e~etyD~vIfDT-APT 152 (330)
T TIGR00345 74 EEYRARVFKLKEQIKQNLSLGVVDMLEDQLEGAALSDLTGSIPGIDEIAAFDEFLKHMDEAELNERETYDVVIFDT-APT 152 (330)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC-CCC
T ss_conf 9879999999999860678873202799999877775227998588999999999876543215676234688716-974
Q ss_pred CCC--C-CCCC---------HHHHHCCHHHHHHH-HHHHHCCCCHHH--HHHHCCCCHHHHHHHH--CCCCCCCCCEEEE
Q ss_conf 665--5-3761---------36521002556651-454420441245--7763135011122220--1321116863898
Q gi|254780401|r 165 GNG--L-VFPA---------GPLRVPLSRQLSYV-DAILYVGNKKNV--ISSIKNKSVYFAKLKP--RLTFDLSGKKVLA 227 (338)
Q Consensus 165 gn~--~-llPa---------GpLREp~~~~l~ra-d~vi~~~~~~~~--~~~~~~~~i~~~~~~~--~~~~~l~~k~v~a 227 (338)
T Consensus 153 GHTLRLL~lP~~~~~~~~~~~k~~~~~g~~~~~~~~~Lpf~G~~~~l~~~~~l~~~~e~Ke~~~~~~~~l~DP~~T~f~~ 232 (330)
T TIGR00345 153 GHTLRLLQLPEVLSKFLEKFIKLREKLGPMLKLFKELLPFMGAGESLEDDEALEKLEELKEQIEAAREVLSDPERTSFVL 232 (330)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 67775310023679999874356777889887664105789898878778999989999999999999724998516888
Q ss_pred EE-----CCCCHHHHHHHHHHHCCCCC
Q ss_conf 74-----15535789998874010000
Q gi|254780401|r 228 FS-----GIADTEKFFTTVRQLGALIE 249 (338)
Q Consensus 228 fs-----GIa~P~~F~~~L~~~g~~i~ 249 (338)
T Consensus 233 V~~pE~~~l~E~~R~~~~L~~Y~~~~~ 259 (330)
T TIGR00345 233 VVIPEKMSLYESERAHKELKKYGIKVD 259 (330)
T ss_pred EEECCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 860262427899999999986498504