HHsearch alignment of GI: 254780401 and MMDB domain: 1xjc_A_

>1xjc_A (A:) MOBB protein homolog; structural genomics, midwest center for structural genomics, PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus}

Probab=96.66  E-value=0.0057  Score=41.27  Aligned_cols=43  Identities=19%  Similarity=0.118  Sum_probs=34.7

Q ss_pred             CCEEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC
Q ss_conf             988998230007888748999999998524731598760457877
Q gi|254780401|r   44 IPVICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKS   88 (338)
Q Consensus        44 ~pVI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~   88 (338)
                      .|||++.-  .+|+|||-+...|+..|+++|++|+++.-..++..
T Consensus         4 ~~vi~i~G--~~GsGKTTll~~l~~~l~~~g~kV~vi~~D~~~~~   46 (169)
T 1xjc_A            4 XNVWQVVG--YKHSGKTTLXEKWVAAAVREGWRVGTVKHHGHGGE   46 (169)
T ss_dssp             CCEEEEEC--CTTSSHHHHHHHHHHHHHHTTCCEEEEECCC----
T ss_pred             CEEEEEEC--CCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf             65999982--99998999999999999866995157525775654