HHsearch results for GI: 254780401 and protein with PDBid: 2og2_A
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=96.07 E-value=0.0055 Score=40.29 Aligned_cols=98 Identities=19% Similarity=0.270 Sum_probs=58.5
Q ss_pred EEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHH-HHH--CCCCCCCCCH
Q ss_conf 9982300078887489999999985247315987604578777755871456788770421233-220--5763465201
Q gi|254780401|r 47 ICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLL-LAR--RAVTIVTSDR 123 (338)
Q Consensus 47 I~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~l-la~--~~pv~V~~~R 123 (338)
..|| +-|+|||-++.-||.+++++|++|++++= ++..-.+=|.+. +++ .+|++++..-
T Consensus 161 l~vG---~nGvGKTTTiaKLA~~~k~~g~kv~l~a~----------------DTfRaaAveQL~~~a~~~~v~~~~~~~~ 221 (359)
T 2og2_A 161 MIVG---VNGGGKTTSLGKLAHRLKNEGTKVLMAAG----------------DTFRAAASDQLEIWAERTGCEIVVAEGD 221 (359)
T ss_dssp EEEC---CTTSCHHHHHHHHHHHHHHTTCCEEEECC----------------CCSCHHHHHHHHHHHHHHTCEEECCSSS
T ss_pred EEEC---CCCCCHHHHHHHHHHHHHHCCCCCEEEEC----------------CCCCHHHHHHHHHHHHHCCCCEEECCCC
T ss_conf 9978---88886461799999999966998605640----------------4232769999999986428842421576
Q ss_pred --------HHHHHHHCCCCCCEEEECCC-CCCCC---------C----------CCEEEEEEECCCCC
Q ss_conf --------22566410245747997183-22344---------1----------23069999618433
Q gi|254780401|r 124 --------KIGVQMLLQEGVDIIIMDDG-FHSAD---------L----------QADFSLIVVNSHRG 163 (338)
Q Consensus 124 --------~~~~~~~~~~~~diiIlDDG-fQh~~---------l----------~rdl~Ivl~d~~~~ 163 (338)
..+.+++...++|+||.|-+ -.|.. + .++-.++|+|+..+
T Consensus 222 ~~~~a~v~~~a~~~Ak~~~~DvvlIDTAGR~~~~~~lm~EL~ki~~~i~k~~~~~p~e~lLVlda~~g 289 (359)
T 2og2_A 222 KAKAATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTG 289 (359)
T ss_dssp SCCHHHHHHHHHHHHHHTTCSEEEEECCCCSSCCHHHHHHHHHHHHHHHHHSTTCCSEEEEEEEGGGG
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
T ss_conf 22778888999999997799989984888785658899999999987631257898358998235658