HHsearch results for GI: 254780401 and protein with PDBid: 2z83_A
>2z83_A Helicase/nucleoside triphosphatase; hydrolase, membrane, nucleotide-binding, RNA replication, transmembrane, viral protein; 1.80A {Japanese encephalitis virus} PDB: 2v8o_A 2qeq_A
Probab=94.65 E-value=0.052 Score=33.36 Aligned_cols=53 Identities=13% Similarity=0.174 Sum_probs=31.8
Q ss_pred CCEEEEEE-CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-CEEEECH
Q ss_conf 86389874-15535789998874010000122143323489899999999756479-8799854
Q gi|254780401|r 222 GKKVLAFS-GIADTEKFFTTVRQLGALIEQCYSFGDHAHLSDKKIAYLLDQAQQKG-LILVTTA 283 (338)
Q Consensus 222 ~k~v~afs-GIa~P~~F~~~L~~~g~~i~~~~~fpDHh~ys~~dl~~i~~~a~~~~-~~iiTTE 283 (338)
+.+++.|| ++..=+.+.+.|++.|+++... |-.-..++.+ +.++.. ..||+|.
T Consensus 190 ~gk~LVFv~s~~~ae~la~~L~~~g~~v~~l-----h~~l~~~~~~----~~~~g~~~vlVATd 244 (459)
T 2z83_A 190 AGKTVWFVASVKMGNEIAMCLQRAGKKVIQL-----NRKSYDTEYP----KCKNGDWDFVITTD 244 (459)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHTTCCEEEE-----STTCCCCCGG----GSSSCCCSEEEESS
T ss_pred CCCEEEEECCHHHHHHHHHHHHHCCCCEEEE-----CCCCCHHHHH----HHHCCCCCEEEECH
T ss_conf 8999999797999999999998689909996-----8989899996----53379943999824