HHSEARCH alignment of GI: 254780401 and SCOP domain: d1vmaa2

Alignment
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=95.39  E-value=0.0091  Score=37.05  Aligned_cols=79  Identities=24%  Similarity=0.321  Sum_probs=47.5

Q ss_pred             EEEECCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCHHHHCCHHHHH-HH--CCCCCCCCC
Q ss_conf             899823000788874899999999852473159876045787777558714567887704212332-20--576346520
Q gi|254780401|r   46 VICVGGFVMGGTGKTPTALAIAKAVIDKNLKPGFLSRGYGRKSRISFRVDLEKHSAYDVGDEPLLL-AR--RAVTIVTSD  122 (338)
Q Consensus        46 VI~VGNitvGGtGKTP~v~~l~~~l~~~g~~~~ilsRGYg~~~~~~~~v~~~~~~~~~vGDEp~ll-a~--~~pv~V~~~  122 (338)
                      +.-||   .=|+|||-++.-||.++.++|.+|++++=-                +.+-.+-|-+.. ++  ..|+.+..+
T Consensus        14 i~lvG---ptGvGKTTTiAKLAa~~~~~~~kV~lit~D----------------t~R~gA~eQL~~~a~~l~i~~~~~~~   74 (213)
T d1vmaa2          14 IMVVG---VNGTGKTTSCGKLAKMFVDEGKSVVLAAAD----------------TFRAAAIEQLKIWGERVGATVISHSE   74 (213)
T ss_dssp             EEEEC---CTTSSHHHHHHHHHHHHHHTTCCEEEEEEC----------------TTCHHHHHHHHHHHHHHTCEEECCST
T ss_pred             EEEEC---CCCCCHHHHHHHHHHHHHHCCCCEEEEEEC----------------CCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf             99989---999988999999999999779906999601----------------33420467888776432764103677


Q ss_pred             HHHHHH-------HHCCCCCCEEEECCC
Q ss_conf             122566-------410245747997183
Q gi|254780401|r  123 RKIGVQ-------MLLQEGVDIIIMDDG  143 (338)
Q Consensus       123 R~~~~~-------~~~~~~~diiIlDDG  143 (338)
                      ...-+.       .....+.|+|+.|=.
T Consensus        75 ~~d~~~~~~~~~~~~~~~~~d~ilIDTa  102 (213)
T d1vmaa2          75 GADPAAVAFDAVAHALARNKDVVIIDTA  102 (213)
T ss_dssp             TCCHHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             7768998788789998769998998245


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: GTPase domain of the signal recognition particle receptor FtsY
species: Thermotoga maritima [TaxId: 2336]