HHsearch alignment for GI: 254780402 and conserved domain: COG0438

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane].
Probab=98.10  E-value=0.00074  Score=45.02  Aligned_cols=270  Identities=20%  Similarity=0.163  Sum_probs=136.1

Q ss_pred             CEEEEEECCCCHH---HHHHHHHHCCCCEEEEEECCCC-------CCC-CCCH--HHHHHHHHCCCCCCEEEECCHHHHH
Q ss_conf             2035640476214---6788874224550586412665-------421-2100--1111233102644236641577888
Q gi|254780402|r  129 PDCMILSESDIWP---LTVFELSKQRIPQVLVNARMSR-------RSF-KNWK--TVLSFSKKIFSQFSLVIVQSERYFR  195 (440)
Q Consensus       129 P~~~i~~e~ElWP---nli~~~~~~~ip~~linarls~-------~S~-~~~~--~~~~l~~~~~~~~~~i~~qs~~~~~  195 (440)
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (381)
T COG0438          84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKE  163 (381)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHH
T ss_conf             50898602112320267899988617867999703431000000001124578999999987642144599994588899


Q ss_pred             HHHHHCCCC-EEEECCCCCCCCCCCCCHHHHHHHHHHCCC---CCEEECCCCCC-CCCCCCCCCCCCCCCC-CCEEEEEE
Q ss_conf             998608850-587204310123442212568999986179---86175046553-3210000000000123-41248897
Q gi|254780402|r  196 RYKELGAQK-LIVSGNLKIDTESLPCDKELLSLYQESIAG---RYTWAAISTFE-GEEDKAVYVHNFIKCR-TDVLTIIV  269 (440)
Q Consensus       196 rl~~lG~~~-i~v~GnlK~d~~~~~~~~~~~~~~~~~~~~---r~v~vagSth~-~EE~~il~a~~~l~~~-~~~~lIIv  269 (440)
T Consensus       164 ~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~  236 (381)
T COG0438         164 LLEALGVPNKIVVIPNG-IDTEKFAPA------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIV  236 (381)
T ss_pred             HHHHHCCCCCEEEECCC-CCHHHCCCC------CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf             99984677887997588-587874700------01445356987999964886547999999999985321586489999


Q ss_pred             ECCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCC--CCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCC
Q ss_conf             0552114788877653001011001344444664167506765--20255422082066135544454583768961994
Q gi|254780402|r  270 PRHPRRCDAIERRLIAKGLKVARRSRGDVINAEVDIFLGDTIG--EMGFYLRMTEIAFIGRSFCASGGQNPLEAAMLGCA  347 (440)
Q Consensus       270 PRhpeR~~~i~~~l~~~gl~~~~~S~~~~~~~~~~V~i~Dt~G--eL~~lY~~AdiafVGGSl~~~GGhN~lEpaa~G~p  347 (440)
T Consensus       237 g~~~~~~~~~~~~~~~~~~-------------~~~v~~~g~~~~~~~~~~~~~~~~-~v~ps~~e~~~~~~~Ea~a~g~p  302 (381)
T COG0438         237 GDGPERREELEKLAKKLGL-------------EDNVKFLGYVPDEELAELLASADV-FVLPSLSEGFGLVLLEAMAAGTP  302 (381)
T ss_pred             EECCCHHHHHHHHHHHCCC-------------CCCEEECCCCCHHHHHHHHHHCCE-EEECCCCCCCCHHHHHHHHHCCE
T ss_conf             9534128899999997088-------------887899177898999999972809-99178644558899999984986


Q ss_pred             EEECCCCCCHHHHHHHHHHCCCEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             999898443799999999789869957--98999999999958989999999999999970455699999999975237
Q gi|254780402|r  348 ILSGPNVENFRDIYRRMVSSGAVRIVE--EVGTLADMVYSLLSEPTIRYEMINAAINEVKKMQGPLKITLRSLDSYVNP  424 (440)
Q Consensus       348 Vi~GP~~~nf~e~~~~L~~~g~~~~v~--d~~eL~~~l~~ll~d~~~~~~~~~~a~~~i~~~~ga~~~~~~~i~~~l~~  424 (440)
T Consensus       303 vi~~~~~-~~~~~~~---~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  376 (381)
T COG0438         303 VIASDVG-GIPEVVE---DGETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVE-EEFSWERIAEQLLELYEE  376 (381)
T ss_pred             EEECCCC-CHHHHHC---CCCEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHH
T ss_conf             9995899-8688430---697069988999999999999998697999999999999999-866999999999999999