HHsearch alignment for GI: 254780402 and conserved domain: COG0707
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane].
Probab=99.55 E-value=2.8e-11 Score=93.73 Aligned_cols=320 Identities=15% Similarity=0.133 Sum_probs=187.6
Q ss_pred EEEEEECCHHHHHHHHHHHHHHHHCCCC-EEEEECCCCCCHHHHCCCCCCEEE---------EECCCCCC----------
Q ss_conf 7999817899999999999999861998-999962776300121014774168---------85055720----------
Q gi|254780402|r 58 LIWFHASSVGETMALIGLIPAIRSRHVN-VLLTTMTATSAKVARKYLGQYAIH---------QYAPLDIQ---------- 117 (440)
Q Consensus 58 ~IW~HaaSvGE~~~a~pli~~l~~~~~~-iliT~~T~tg~~~~~~~~~~~~~~---------~y~P~D~~---------- 117 (440)
T Consensus 3 ivl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~-~~~~~~~e~~l~~~~-~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T COG0707 3 IVLTAGGTGGHVFPALALAEELAKRGWEQVIV-LGTGDGLEAFLVKQY-GIEFELIPSGGLRRKGSLKLLKAPFKLLKGV 80 (357)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHCCCCEEEE-ECCCCHHHHHCCCCC-CEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99996677665779999999999609717999-446634443205456-7079998646556565066788699999999
Q ss_pred HHHHHHHHHHCCEEEEEECCC-CHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHH
Q ss_conf 134455744202035640476-2146788874224550586412665421210011112331026442366415778889
Q gi|254780402|r 118 PAVSRFLKYWKPDCMILSESD-IWPLTVFELSKQRIPQVLVNARMSRRSFKNWKTVLSFSKKIFSQFSLVIVQSERYFRR 196 (440)
Q Consensus 118 ~~~~~fl~~~~P~~~i~~e~E-lWPnli~~~~~~~ip~~linarls~~S~~~~~~~~~l~~~~~~~~~~i~~qs~~~~~r 196 (440)
T Consensus 81 ~~a~~il~~~kPd~vig~Ggyvs~P~~~-Aa~~~~iPv~ihEqn~~~G--~ank~~~~~a~~V~~~f~-------~---- 146 (357)
T COG0707 81 LQARKILKKLKPDVVIGTGGYVSGPVGI-AAKLLGIPVIIHEQNAVPG--LANKILSKFAKKVASAFP-------K---- 146 (357)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCCHHHH-HHHHCCCCEEEEEECCCCC--HHHHHHHHHEEEEEECCC-------H----
T ss_conf 9999999970998999579863464999-9861699879997346642--656453230125771251-------1----
Q ss_pred HHHHCC--CCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCC--CCCCCCCCCCCCCCCCEEEEEEECC
Q ss_conf 986088--505872043101234422125689999861798617504655332--1000000000012341248897055
Q gi|254780402|r 197 YKELGA--QKLIVSGNLKIDTESLPCDKELLSLYQESIAGRYTWAAISTFEGE--EDKAVYVHNFIKCRTDVLTIIVPRH 272 (440)
Q Consensus 197 l~~lG~--~~i~v~GnlK~d~~~~~~~~~~~~~~~~~~~~r~v~vagSth~~E--E~~il~a~~~l~~~~~~~lIIvPRh 272 (440)
T Consensus 147 -~~~~~~~~~~~~tG~Pvr~~~~~--~~~~~~~~~~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~--~~~v~~~~G~ 221 (357)
T COG0707 147 -LEAGVKPENVVVTGIPVRPEFEE--LPAAEVRKDGRLDKKTILVTGGSQGAKALNDLVPEALAKLAN--RIQVIHQTGK 221 (357)
T ss_pred -HHCCCCCCCEEEECCCCCHHHHC--CCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC--CEEEEEECCC
T ss_conf -21157866437857846366521--635544320378984899988824279999999999872121--6699997697
Q ss_pred CCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCEEECC
Q ss_conf 21147888776530010110013444446641675067652025542208206613554445458376896199499989
Q gi|254780402|r 273 PRRCDAIERRLIAKGLKVARRSRGDVINAEVDIFLGDTIGEMGFYLRMTEIAFIGRSFCASGGQNPLEAAMLGCAILSGP 352 (440)
Q Consensus 273 peR~~~i~~~l~~~gl~~~~~S~~~~~~~~~~V~i~Dt~GeL~~lY~~AdiafVGGSl~~~GGhN~lEpaa~G~pVi~GP 352 (440)
T Consensus 222 ~~-~~~~~~~~~~~~~----------------~~v~~f~~dm~~~~~~ADLvIs-----RaGa~Ti~E~~a~g~P~IliP 279 (357)
T COG0707 222 ND-LEELKSAYNELGV----------------VRVLPFIDDMAALLAAADLVIS-----RAGALTIAELLALGVPAILVP 279 (357)
T ss_pred CH-HHHHHHHHHCCCC----------------EEEEEHHHHHHHHHHHCCEEEE-----CCCHHHHHHHHHHCCCEEEEC
T ss_conf 36-9999998720681----------------8997667539999986458986-----786649999999589889965
Q ss_pred CCCC---HHH-HHHHHHHCCCEEEECCHH----HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 8443---799-999999789869957989----999999999589899999999999999704556999999999752
Q gi|254780402|r 353 NVEN---FRD-IYRRMVSSGAVRIVEEVG----TLADMVYSLLSEPTIRYEMINAAINEVKKMQGPLKITLRSLDSYV 422 (440)
Q Consensus 353 ~~~n---f~e-~~~~L~~~g~~~~v~d~~----eL~~~l~~ll~d~~~~~~~~~~a~~~i~~~~ga~~~~~~~i~~~l 422 (440)
T Consensus 280 ~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~--p~aa~~i~~~~~~~~ 355 (357)
T COG0707 280 YPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGK--PDAAERIADLLLALA 355 (357)
T ss_pred CCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHH
T ss_conf 8987644189999999967976994255479999999999996598999999999987179--878999999999985