HHsearch alignment for GI: 254780402 and conserved domain: COG1887
>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane].
Probab=97.49 E-value=0.0097 Score=37.69 Aligned_cols=223 Identities=13% Similarity=0.139 Sum_probs=133.5
Q ss_pred HHHHCCCCCCEEEECCHHHHHHHHH-HCC--CCEEEECCCCCCCCCCCCCHHHHHH-HH---HHCCCCCEEECCCCCCCC
Q ss_conf 2331026442366415778889986-088--5058720431012344221256899-99---861798617504655332
Q gi|254780402|r 175 FSKKIFSQFSLVIVQSERYFRRYKE-LGA--QKLIVSGNLKIDTESLPCDKELLSL-YQ---ESIAGRYTWAAISTFEGE 247 (440)
Q Consensus 175 l~~~~~~~~~~i~~qs~~~~~rl~~-lG~--~~i~v~GnlK~d~~~~~~~~~~~~~-~~---~~~~~r~v~vagSth~~E 247 (440)
T Consensus 141 ~~~~~~~~~dy~~~~~~~~~~if~~~f~~~~~~i~~~G~Pr~D~~~~~~~~~~~~~~~~~~~~~~~~k~vIlyaPTfr~~ 220 (388)
T COG1887 141 EFIYVRNHWDYLISPNPESTAIFAEAFNIDKENILETGYPRNDKLFDEAGKTEDILLIQLALPLPQDKKVILYAPTFRDN 220 (388)
T ss_pred CCEEEEEECCCEECCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCC
T ss_conf 53576521030311781066899987053300044336585056544122146678877604775557769965765788
Q ss_pred C--------CCCCCCCCCCCCC--CCEEEEEEECCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf 1--------0000000000123--41248897055211478887765300101100134444466416750676520255
Q gi|254780402|r 248 E--------DKAVYVHNFIKCR--TDVLTIIVPRHPRRCDAIERRLIAKGLKVARRSRGDVINAEVDIFLGDTIGEMGFY 317 (440)
Q Consensus 248 E--------~~il~a~~~l~~~--~~~~lIIvPRhpeR~~~i~~~l~~~gl~~~~~S~~~~~~~~~~V~i~Dt~GeL~~l 317 (440)
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~ii~k~-Hp~is~~~~~~~~---------------~~~~~~~vs~-~~di~dl 283 (388)
T COG1887 221 DVLIGTQFFNLDIDIEKLKEKLGENEYVIIVKP-HPLISDKIDKRYA---------------LDDFVLDVSD-NADINDL 283 (388)
T ss_pred CCCCCCHHHCCHHHHHHHHHHHCCCCEEEEEEC-CHHHCCCCHHHHC---------------CCCCEEECCC-CHHHHHH
T ss_conf 554330110001459999876166876999955-8534042100020---------------3660465466-3449999
Q ss_pred HHHCCCEEEECCCCCCCCCCHHHHHHHCCCEEECCC----CCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCHHHH
Q ss_conf 422082066135544454583768961994999898----4437999999997898699579899999999995898999
Q gi|254780402|r 318 LRMTEIAFIGRSFCASGGQNPLEAAMLGCAILSGPN----VENFRDIYRRMVSSGAVRIVEEVGTLADMVYSLLSEPTIR 393 (440)
Q Consensus 318 Y~~AdiafVGGSl~~~GGhN~lEpaa~G~pVi~GP~----~~nf~e~~~~L~~~g~~~~v~d~~eL~~~l~~ll~d~~~~ 393 (440)
T Consensus 284 l~~sDiLITDySSv------~fdf~~l~KPiify~~D~~~y~~~rg~~~d~~~~~Pg~~~~~~~~li~ai~~~~~~~~~~ 357 (388)
T COG1887 284 LLVSDILITDYSSV------IFDFMLLDKPIIFYTYDLEQYDELRGFYLDYKFEAPGEVVETQEELIDAIKPYDEDGNYD 357 (388)
T ss_pred HHHCCEEEECCCCH------HHHHHHHCCCEEEEECCCHHHHHCCCHHHHHHHCCCCCHHCCHHHHHHHHHHHHCCCHHH
T ss_conf 87548888516300------466886559679996470475540112445776199511036899999877531022156
Q ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHH
Q ss_conf 99999999999704--5569999999997
Q gi|254780402|r 394 YEMINAAINEVKKM--QGPLKITLRSLDS 420 (440)
Q Consensus 394 ~~~~~~a~~~i~~~--~ga~~~~~~~i~~ 420 (440)
T Consensus 358 ~~k~~~~~~~~~~~~dg~ss~ri~~~i~~ 386 (388)
T COG1887 358 LEKLRVFNDKFNSYEDGRSSERILKLIFK 386 (388)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHC
T ss_conf 88898777775123473077899999850