HHsearch alignment for GI: 254780402 and conserved domain: TIGR03088
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.79 E-value=8e-16 Score=123.56 Aligned_cols=338 Identities=15% Similarity=0.127 Sum_probs=198.0
Q ss_pred CCHHH-HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCEEEEECC----CCCC--HHHHHHHHHHCCEEEEEEC
Q ss_conf 78999-999999999998619989999627763001210147741688505----5720--1344557442020356404
Q gi|254780402|r 64 SSVGE-TMALIGLIPAIRSRHVNVLLTTMTATSAKVARKYLGQYAIHQYAP----LDIQ--PAVSRFLKYWKPDCMILSE 136 (440)
Q Consensus 64 aSvGE-~~~a~pli~~l~~~~~~iliT~~T~tg~~~~~~~~~~~~~~~y~P----~D~~--~~~~~fl~~~~P~~~i~~e 136 (440)
T Consensus 11 l~~GGaE~~~~~l~~~l~~~~~~~~vi~~~~~~~-~~~~~~~~~v~~~~l~~~~~~~~~~~~~l~~li~~~kpDiIh~~- 88 (374)
T TIGR03088 11 FDVGGLENGLVNLINHLPADRYRHAVVALTEVSA-FRKRIQRPDVAFYALHKQPGKDVAVYPQLYRLLRQLRPDIVHTR- 88 (374)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCH-HHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEC-
T ss_conf 9998279999999997887599399999789845-78999868988999078876479999999999998398489863-
Q ss_pred CCCHHHHHHHHHHCCCCEEEEEEC---CCCCCCCC--CHHHHHHHHHCCCCCCEEEECCHHHHHHHHH-HCC--CCEEEE
Q ss_conf 762146788874224550586412---66542121--0011112331026442366415778889986-088--505872
Q gi|254780402|r 137 SDIWPLTVFELSKQRIPQVLVNAR---MSRRSFKN--WKTVLSFSKKIFSQFSLVIVQSERYFRRYKE-LGA--QKLIVS 208 (440)
Q Consensus 137 ~ElWPnli~~~~~~~ip~~linar---ls~~S~~~--~~~~~~l~~~~~~~~~~i~~qs~~~~~rl~~-lG~--~~i~v~ 208 (440)
T Consensus 89 ~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~k~~---~~~~~~~i~vs~~~~~~~~~~~~~~~~ki~~I 165 (374)
T TIGR03088 89 NLAALEAQLPAALAGVPARIHGEHGRDVFDLDGSNWKYRWLRRLY---RPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQI 165 (374)
T ss_pred CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH---HHHCCEEEECCHHHHHHHHHHHCCCHHHEEEE
T ss_conf 611699999999849988999607875437431058999999999---98568899915899999998709987898996
Q ss_pred CCCCCCCCCCCCCHHHHHHHHH--H-CCCCCEEE-CCCCCCCC-CCCCCCCCCCC-CC----CCCEEEEEEECCCCHHHH
Q ss_conf 0431012344221256899998--6-17986175-04655332-10000000000-12----341248897055211478
Q gi|254780402|r 209 GNLKIDTESLPCDKELLSLYQE--S-IAGRYTWA-AISTFEGE-EDKAVYVHNFI-KC----RTDVLTIIVPRHPRRCDA 278 (440)
Q Consensus 209 GnlK~d~~~~~~~~~~~~~~~~--~-~~~r~v~v-agSth~~E-E~~il~a~~~l-~~----~~~~~lIIvPRhpeR~~~ 278 (440)
T Consensus 166 ~Ng-id~~~f~~~~~~~~~~~~~~~~~~~~~~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~G~~~-~~ 243 (374)
T TIGR03088 166 YNG-VDTERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPAR-GA 243 (374)
T ss_pred CCC-CCHHHCCCCCCCHHHHHHHCCCCCCCEEEEEEEECEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCH-HH
T ss_conf 687-7652158773106776543158987769999663403078799999999999867776688899998177659-99
Q ss_pred HHHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCEEECCCCCCHH
Q ss_conf 88776530010110013444446641675067652025542208206613554445458376896199499989844379
Q gi|254780402|r 279 IERRLIAKGLKVARRSRGDVINAEVDIFLGDTIGEMGFYLRMTEIAFIGRSFCASGGQNPLEAAMLGCAILSGPNVENFR 358 (440)
Q Consensus 279 i~~~l~~~gl~~~~~S~~~~~~~~~~V~i~Dt~GeL~~lY~~AdiafVGGSl~~~GGhN~lEpaa~G~pVi~GP~~~nf~ 358 (440)
T Consensus 244 l~~~i~~~~l~~-------------~v~f~G~~~~~~~~~~~~D-i~v~~S~~EGf~~~llEAma~g~PvIa-sdvgg~~ 308 (374)
T TIGR03088 244 CEQMVRAAGLAH-------------LVWLPGERDDVPALMQALD-LFVLPSLAEGISNTILEAMASGLPVIA-TAVGGNP 308 (374)
T ss_pred HHHHHHHCCCCC-------------EEECCCCCCCHHHHHHHCC-CEEECCCCCCCCHHHHHHHHCCCCEEE-CCCCCHH
T ss_conf 999999718777-------------5853787468999999639-003134434467799999975997999-1899818
Q ss_pred HHHHHHHHCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 9999999789869957989999999999589899999999999999704556999999999752378
Q gi|254780402|r 359 DIYRRMVSSGAVRIVEEVGTLADMVYSLLSEPTIRYEMINAAINEVKKMQGPLKITLRSLDSYVNPL 425 (440)
Q Consensus 359 e~~~~L~~~g~~~~v~d~~eL~~~l~~ll~d~~~~~~~~~~a~~~i~~~~ga~~~~~~~i~~~l~~~ 425 (440)
T Consensus 309 eii~~-~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~v~~~F-s~~~~~~~~~~lY~~l 373 (374)
T TIGR03088 309 ELVQH-GVTGALVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQF-SINAMVAAYAGLYDQL 373 (374)
T ss_pred HHHCC-CCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHH
T ss_conf 98617-98689978999999999999997799999999999999999878-9999999999999996