HHsearch alignment for GI: 254780402 and conserved domain: pfam04464
>pfam04464 Glyphos_transf CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase. Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid.
Probab=97.51 E-value=0.0013 Score=43.34 Aligned_cols=161 Identities=12% Similarity=0.101 Sum_probs=95.3
Q ss_pred CCCCEEECCCCCCCCCCC---C------CC-CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCC
Q ss_conf 798617504655332100---0------00-0000012341248897055211478887765300101100134444466
Q gi|254780402|r 233 AGRYTWAAISTFEGEEDK---A------VY-VHNFIKCRTDVLTIIVPRHPRRCDAIERRLIAKGLKVARRSRGDVINAE 302 (440)
Q Consensus 233 ~~r~v~vagSth~~EE~~---i------l~-a~~~l~~~~~~~lIIvPRhpeR~~~i~~~l~~~gl~~~~~S~~~~~~~~ 302 (440)
T Consensus 9 ~~kkvILYaPT~R~~~~~~~~~~~~~~~~~~l~~~l~--~n~~liik~Hp~~~-----~~~~~-------------~~~~ 68 (186)
T pfam04464 9 KDKKVILYAPTFRDDGYYSAGSILFNLDLEKLLEKLG--ENYVILVKLHPLVS-----NSIIN-------------KRYD 68 (186)
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHC--CCEEEEEEECHHHH-----CCHHH-------------HCCC
T ss_conf 9897999869733886655444323013999998727--68399997266764-----00022-------------0257
Q ss_pred CEEEEECCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCEEE-CCCCCCHHHH---HHHHHHCCCEEEECCHHH
Q ss_conf 416750676520255422082066135544454583768961994999-8984437999---999997898699579899
Q gi|254780402|r 303 VDIFLGDTIGEMGFYLRMTEIAFIGRSFCASGGQNPLEAAMLGCAILS-GPNVENFRDI---YRRMVSSGAVRIVEEVGT 378 (440)
Q Consensus 303 ~~V~i~Dt~GeL~~lY~~AdiafVGGSl~~~GGhN~lEpaa~G~pVi~-GP~~~nf~e~---~~~L~~~g~~~~v~d~~e 378 (440)
T Consensus 69 ~~~~~~~~~~di~~ll~~aDiLITDYSSi------~fD~lll~kPii~~~~D~~~Y~~~rg~~~d~~~~~~g~~v~~~~e 142 (186)
T pfam04464 69 SDVIDVSDYSDIQDLFLASDILITDYSSV------FFDFALLDKPIIFYAPDLEEYRELRGFYFDYEKEAPGPVVKTFEE 142 (186)
T ss_pred CCEEECCCCCCHHHHHHHHCEEEEEHHHH------HHHHHHHCCCEEEEECCHHHHHHCCCCCCCHHHCCCCCEECCHHH
T ss_conf 76797889858999999843677646889------999998799789981878999752586105878078762598999
Q ss_pred HHHHHHHHHCCHHHHHHHHHH-HHHHHHHC-CCHHHHHHHHHH
Q ss_conf 999999995898999999999-99999704-556999999999
Q gi|254780402|r 379 LADMVYSLLSEPTIRYEMINA-AINEVKKM-QGPLKITLRSLD 419 (440)
Q Consensus 379 L~~~l~~ll~d~~~~~~~~~~-a~~~i~~~-~ga~~~~~~~i~ 419 (440)
T Consensus 143 L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~DG~s~eRv~~~I~ 185 (186)
T pfam04464 143 LLDALKNYMENDEEYAEKRRAFRDKFFPYDDGKSSERVLNRIF 185 (186)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 9999999875776779999999998288758808999999983