HHsearch results for GI: 254780402 and protein with PDBid: 1f0k_A
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.44 E-value=1.4e-10 Score=87.71 Aligned_cols=325 Identities=14% Similarity=0.031 Sum_probs=174.3
Q ss_pred CCEEEEEECC-HHHHHHHHHHHHHHHHCCCCEE-EEECCCCCCHHHHCCCCCCEEEEECCCCC-----------------
Q ss_conf 8779998178-9999999999999986199899-99627763001210147741688505572-----------------
Q gi|254780402|r 56 GPLIWFHASS-VGETMALIGLIPAIRSRHVNVL-LTTMTATSAKVARKYLGQYAIHQYAPLDI----------------- 116 (440)
Q Consensus 56 ~~~IW~HaaS-vGE~~~a~pli~~l~~~~~~il-iT~~T~tg~~~~~~~~~~~~~~~y~P~D~----------------- 116 (440)
++.|-|=+++ -|=+..+..|+++|++++.+|. +++...-+.+.+++.. ....++|...
T Consensus 6 ~kkili~t~GtGGHi~~a~ala~~L~~~g~eV~~i~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~ 82 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHG---IEIDFIRISGLRGKGIKALIAAPLRIF 82 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGT---CEEEECCCCCCTTCCHHHHHTCHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHCCCCCC---CCEEEEECCCCCCCCHHHHHHHHHHHH
T ss_conf 97699986897999999999999999688989999838800543122139---957999778868777289999999999
Q ss_pred --CHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCHHHH
Q ss_conf --013445574420203564047621467888742245505864126654212100111123310264423664157788
Q gi|254780402|r 117 --QPAVSRFLKYWKPDCMILSESDIWPLTVFELSKQRIPQVLVNARMSRRSFKNWKTVLSFSKKIFSQFSLVIVQSERYF 194 (440)
Q Consensus 117 --~~~~~~fl~~~~P~~~i~~e~ElWPnli~~~~~~~ip~~linarls~~S~~~~~~~~~l~~~~~~~~~~i~~qs~~~~ 194 (440)
.....+++...+|+.++.+-+...+-....++..+||++.++-...... ..+......+.+......
T Consensus 83 ~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~-- 151 (364)
T 1f0k_A 83 NAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGL---------TNKWLAKIATKVMQAFPG-- 151 (364)
T ss_dssp HHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCCH---------HHHHHTTTCSEEEESSTT--
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEECEECCH---------HHHHHHHHCCEEEECCCC--
T ss_conf 999999999986477779984675568699997535887899851202351---------477665414433210234--
Q ss_pred HHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCC-CEEECCCCCCCC--CCCCCCCCCCCCCCCCEEEEEEEC
Q ss_conf 89986088505872043101234422125689999861798-617504655332--100000000001234124889705
Q gi|254780402|r 195 RRYKELGAQKLIVSGNLKIDTESLPCDKELLSLYQESIAGR-YTWAAISTFEGE--EDKAVYVHNFIKCRTDVLTIIVPR 271 (440)
Q Consensus 195 ~rl~~lG~~~i~v~GnlK~d~~~~~~~~~~~~~~~~~~~~r-~v~vagSth~~E--E~~il~a~~~l~~~~~~~lIIvPR 271 (440)
. .......|+......... ...........++ .+++.+.+.... .+.+.+....+. .....+++..
T Consensus 152 -----~-~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~il~~~gs~G~~~~~~~~~~~~~~l~--~~~~~v~~~~ 220 (364)
T 1f0k_A 152 -----A-FPNAEVVGNPVRTDVLAL---PLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLG--DSVTIWHQSG 220 (364)
T ss_dssp -----S-SSSCEECCCCCCHHHHTS---CCHHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHG--GGEEEEEECC
T ss_pred -----C-CCCCEEECCCCCCHHHCC---CHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH--CCCEEEEEEC
T ss_conf -----4-555405578654122102---1455430246787531324677320225688999999850--2655999944
Q ss_pred CCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCEEEC
Q ss_conf 52114788877653001011001344444664167506765202554220820661355444545837689619949998
Q gi|254780402|r 272 HPRRCDAIERRLIAKGLKVARRSRGDVINAEVDIFLGDTIGEMGFYLRMTEIAFIGRSFCASGGQNPLEAAMLGCAILSG 351 (440)
Q Consensus 272 hpeR~~~i~~~l~~~gl~~~~~S~~~~~~~~~~V~i~Dt~GeL~~lY~~AdiafVGGSl~~~GGhN~lEpaa~G~pVi~G 351 (440)
.............. ....+.+.+-.-.|..+++.||+++.. .|+-++.|++++|+|+|.=
T Consensus 221 ~~~~~~~~~~~~~~---------------~~~~~~v~~f~~~m~~lm~~aDlvIt~-----aG~~Ti~E~l~~g~P~I~i 280 (364)
T 1f0k_A 221 KGSQQSVEQAYAEA---------------GQPQHKVTEFIDDMAAAYAWADVVVCR-----SGALTVSEIAAAGLPALFV 280 (364)
T ss_dssp TTCHHHHHHHHHHT---------------TCTTSEEESCCSCHHHHHHHCSEEEEC-----CCHHHHHHHHHHTCCEEEC
T ss_pred CCHHHHHHHHHHHH---------------CCCCEEEEHHHHHHHHHHHHCCEEEEC-----CCCCHHHHHHHCCCCEEEE
T ss_conf 41377787776640---------------465415312787799999846777745-----8840588998638988998
Q ss_pred CCC---CCHHHHHHHHHHCCCEEEEC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 984---43799999999789869957----98999999999958989999999999999970455699999999975237
Q gi|254780402|r 352 PNV---ENFRDIYRRMVSSGAVRIVE----EVGTLADMVYSLLSEPTIRYEMINAAINEVKKMQGPLKITLRSLDSYVNP 424 (440)
Q Consensus 352 P~~---~nf~e~~~~L~~~g~~~~v~----d~~eL~~~l~~ll~d~~~~~~~~~~a~~~i~~~~ga~~~~~~~i~~~l~~ 424 (440)
|.- ++....++.+.+.|++..+. +++.+.+.+..+ +++.+.+|++++++... .++++++.+.|.+. -.
T Consensus 281 P~~~~~~~Q~~NA~~l~~~G~~~~i~~~~l~~e~l~~~l~~l--~~~~l~~m~~~~~~~~~--~~~~~~I~~~I~~l-~~ 355 (364)
T 1f0k_A 281 PFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASI--PDATERVANEVSRV-AR 355 (364)
T ss_dssp CCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCC--TTHHHHHHHHHHHH-HT
T ss_pred ECCCCCCHHHHHHHHHHHCCCEEEECHHCCCHHHHHHHHHHH--CHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHH-HH
T ss_conf 079987769999999997899999052109999999999863--99999999999872589--88999999999999-99
Q ss_pred HHHHHC
Q ss_conf 878501
Q gi|254780402|r 425 LIFQNH 430 (440)
Q Consensus 425 ~~~~~~ 430 (440)
.++.+|
T Consensus 356 ~~~~~~ 361 (364)
T 1f0k_A 356 ALEHHH 361 (364)
T ss_dssp TC----
T ss_pred HHHHHC
T ss_conf 866431