HHsearch results for GI: 254780402 and protein with PDBid: 1psw_A
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.81 E-value=0.00019 Score=47.45 Aligned_cols=261 Identities=13% Similarity=0.052 Sum_probs=116.5
Q ss_pred EEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCEEEEECCCCCC-------HHHHHHHHHHCCEE
Q ss_conf 99981789999999999999986199899996277630012101477416885055720-------13445574420203
Q gi|254780402|r 59 IWFHASSVGETMALIGLIPAIRSRHVNVLLTTMTATSAKVARKYLGQYAIHQYAPLDIQ-------PAVSRFLKYWKPDC 131 (440)
Q Consensus 59 IW~HaaSvGE~~~a~pli~~l~~~~~~iliT~~T~tg~~~~~~~~~~~~~~~y~P~D~~-------~~~~~fl~~~~P~~ 131 (440)
+=++-.++|.+..+.|+++.|++.+|+.-||..+....+.+-+..+..+.+..++.+.. ....+.++..+.|.
T Consensus 4 Lii~~~~iGD~i~~~p~i~~Lk~~~P~~~I~~l~~~~~~~l~~~~p~id~v~~~~~~~~~~~~~~~~~~~~~l~~~~~D~ 83 (348)
T 1psw_A 4 LVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLGHGALEIGERRKLGHSLREKRYDR 83 (348)
T ss_dssp EEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC-------CHHHHHHHHHHTTTTTCSE
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCE
T ss_conf 99918960999999999999998789998999988508999851998678999578533013789999999975416877
Q ss_pred EEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCC--EEEEC
Q ss_conf 5640476214678887422455058641266542121001111233102644236641577888998608850--58720
Q gi|254780402|r 132 MILSESDIWPLTVFELSKQRIPQVLVNARMSRRSFKNWKTVLSFSKKIFSQFSLVIVQSERYFRRYKELGAQK--LIVSG 209 (440)
Q Consensus 132 ~i~~e~ElWPnli~~~~~~~ip~~linarls~~S~~~~~~~~~l~~~~~~~~~~i~~qs~~~~~rl~~lG~~~--i~v~G 209 (440)
++-+...+...++... .+++...... ...++..+.... ..... .......++..+.... .....
T Consensus 84 ~i~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 149 (348)
T 1psw_A 84 AYVLPNSFKSALVPLF--AGIPHRTGWR-----GEMRYGLLNDVR-VLDKE------AWPLMVERYIALAYDKGIMRTAQ 149 (348)
T ss_dssp EEECSCCSGGGHHHHH--TTCSEEEEEC-----TTTCTTTCTEEE-CCCTT------TCCSHHHHHHHTTSCGGGCSSGG
T ss_pred EEECCCCCHHHHHHHH--HCCCCCCCCC-----CCCCCCCCCCCC-CCCCC------CCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 6423543013677876--4165111323-----122323344433-34433------33147888898987640222222
Q ss_pred CCCCCCCC--CCCCHHHHHHHHHH---CCCCCEEEC--CCCCCCC----CCCCCCCCCCCCCCCCEEEEEEE--CCCCHH
Q ss_conf 43101234--42212568999986---179861750--4655332----10000000000123412488970--552114
Q gi|254780402|r 210 NLKIDTES--LPCDKELLSLYQES---IAGRYTWAA--ISTFEGE----EDKAVYVHNFIKCRTDVLTIIVP--RHPRRC 276 (440)
Q Consensus 210 nlK~d~~~--~~~~~~~~~~~~~~---~~~r~v~va--gSth~~E----E~~il~a~~~l~~~~~~~lIIvP--RhpeR~ 276 (440)
++...... ...+..+....... ..++++++. ++++... .+...+..+.+.+. +..+++++ -+-++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~k~wp~~~~~~l~~~l~~~-~~~ivl~~~~~e~~~~ 228 (348)
T 1psw_A 150 DLPQPLLWPQLQVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE-GYQVVLFGSAKDHEAG 228 (348)
T ss_dssp GSCSSCCCCCCCCCHHHHHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT-TCEEEECCCGGGHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHHC-CCCEECCCCHHHHHHH
T ss_conf 455433576667898999999864124667874884587552113689689899999998753-9831205784679999
Q ss_pred HHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEE--CCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCEE--ECC
Q ss_conf 78887765300101100134444466416750--67652025542208206613554445458376896199499--989
Q gi|254780402|r 277 DAIERRLIAKGLKVARRSRGDVINAEVDIFLG--DTIGEMGFYLRMTEIAFIGRSFCASGGQNPLEAAMLGCAIL--SGP 352 (440)
Q Consensus 277 ~~i~~~l~~~gl~~~~~S~~~~~~~~~~V~i~--Dt~GeL~~lY~~AdiafVGGSl~~~GGhN~lEpaa~G~pVi--~GP 352 (440)
+++.+.+.... ....+-+. .++.|+..+.+.||+ |||. +.| -.--|+++|+|++ +||
T Consensus 229 ~~~~~~~~~~~-------------~~~~~~l~g~~sl~el~~li~~a~l-~I~~---Dtg--~~HlAaalg~p~v~lfg~ 289 (348)
T 1psw_A 229 NEILAALNTEQ-------------QAWCRNLAGETQLDQAVILIAACKA-IVTN---DSG--LMHVAAALNRPLVALYGP 289 (348)
T ss_dssp HHHHTTSCHHH-------------HTTEEECTTTSCHHHHHHHHHTSSE-EEEE---SSH--HHHHHHHTTCCEEEEESS
T ss_pred HHHHHHHHHHC-------------CCCCCCCCCCCCHHHHHHHHHCCCE-EECC---CCH--HHHHHHHCCCCEEEEECC
T ss_conf 99999853201-------------4543344576558999999951636-7527---975--999999809998999789
Q ss_pred C
Q ss_conf 8
Q gi|254780402|r 353 N 353 (440)
Q Consensus 353 ~ 353 (440)
.
T Consensus 290 ~ 290 (348)
T 1psw_A 290 S 290 (348)
T ss_dssp S
T ss_pred C
T ss_conf 9