HHsearch results for GI: 254780402 and protein with PDBid: 2bfw_A
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen synthase two rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.08 E-value=1.3e-09 Score=81.30 Aligned_cols=162 Identities=13% Similarity=0.085 Sum_probs=104.5
Q ss_pred HHHHHHH--CCCCCEEE-CCCC-CC-CCCCCCCCCCCCCCC---CCCEEEEEEECCCCHHHHHHHHHHH-HCCHHHHHCC
Q ss_conf 8999986--17986175-0465-53-321000000000012---3412488970552114788877653-0010110013
Q gi|254780402|r 225 LSLYQES--IAGRYTWA-AIST-FE-GEEDKAVYVHNFIKC---RTDVLTIIVPRHPRRCDAIERRLIA-KGLKVARRSR 295 (440)
Q Consensus 225 ~~~~~~~--~~~r~v~v-agSt-h~-~EE~~il~a~~~l~~---~~~~~lIIvPRhpeR~~~i~~~l~~-~gl~~~~~S~ 295 (440)
...+.+. +.++++++ .|.. ++ .--+.+++|++.++. .+++.++|+.+.+++.+...+.+.+ .+.
T Consensus 24 ~~~~~~~~~~~~~~~il~vGrl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~------- 96 (200)
T 2bfw_A 24 KKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGN------- 96 (200)
T ss_dssp HHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCTT-------
T ss_pred HHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCC-------
T ss_conf 9999999498999789999178824169899999999888637799869999836978999999999986899-------
Q ss_pred CCCCCCCCEEEEE--CCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEEE
Q ss_conf 4444466416750--67652025542208206613554445458376896199499989844379999999978986995
Q gi|254780402|r 296 GDVINAEVDIFLG--DTIGEMGFYLRMTEIAFIGRSFCASGGQNPLEAAMLGCAILSGPNVENFRDIYRRMVSSGAVRIV 373 (440)
Q Consensus 296 ~~~~~~~~~V~i~--Dt~GeL~~lY~~AdiafVGGSl~~~GGhN~lEpaa~G~pVi~GP~~~nf~e~~~~L~~~g~~~~v 373 (440)
.+.+. ...-++..+|+.||+ ||-.|..+..|..++||+++|+|||.... .... ++++.+.+..+
T Consensus 97 --------~~~~~~~~~~~~~~~~~~~adi-~v~ps~~E~~~~~~~EAma~G~pvi~~~~-~g~~----e~i~~~~g~l~ 162 (200)
T 2bfw_A 97 --------VKVITEMLSREFVRELYGSVDF-VIIPSYFEPFGLVALEAMCLGAIPIASAV-GGLR----DIITNETGILV 162 (200)
T ss_dssp --------EEEECSCCCHHHHHHHHTTCSE-EEECCSCCSSCHHHHHHHHTTCEEEEESC-HHHH----HHCCTTTCEEE
T ss_pred --------CEEEEEECCHHHHHHHHHCCCC-CEECCCCCCCCHHHHHHHHCCCCEEEECC-CCCC----EEEECCCEEEE
T ss_conf --------3899830798999998750476-24056767898689999988984999649-9871----47858857997
Q ss_pred --CCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHC
Q ss_conf --798999999999958-9899999999999999704
Q gi|254780402|r 374 --EEVGTLADMVYSLLS-EPTIRYEMINAAINEVKKM 407 (440)
Q Consensus 374 --~d~~eL~~~l~~ll~-d~~~~~~~~~~a~~~i~~~ 407 (440)
.|+++|++.+.++++ +++.+++|+++|++.+++.
T Consensus 163 ~~~~~~~la~~i~~~l~~~~~~~~~~~~~a~~~a~~f 199 (200)
T 2bfw_A 163 KAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 199 (200)
T ss_dssp CTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
T ss_conf 7999999999999999579999999999999999847