RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= gi|254780404|ref|YP_003064817.1| inositol monophosphatase family protein [Candidatus Liberibacter asiaticus str. psy62] (286 letters) >3lv0_A Extragenic suppressor protein SUHB; niaid, seattle structural genomics center for infectious disease, ssgcid, CAT scratch disease; 1.85A {Bartonella henselae} PDB: 3luz_A Length = 267 Score = 125 bits (315), Expect = 1e-29 Identities = 49/252 (19%), Positives = 101/252 (40%), Gaps = 17/252 (6%) Query: 35 LDIVRSAVQGASTVAMQYFLRSPNVWWKHEG-SSPVCDADIAVNDYLESFLRPLRPAYGW 93 ++++ A A ++ + N+ +G + V AD + + L RP +G+ Sbjct: 11 MNVMVQAAMKAGRSLVRDYGEVQNLQVSLKGPADYVSQADRKAEKIIFNELSKARPKFGF 70 Query: 94 LSEETDDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVHASALGK 153 L EE+++ + + + F+VDP+DGT F+ G + +S+A+ G+ V GV++ + Sbjct: 71 LMEESEEIIGE-DSQHRFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNPINDE 129 Query: 154 EFFVSVGMKSTCNGKNISVSSNQMSDSLAIMASDVSL----------KGLDSYVRFRRQS 203 F G + N + VS+ + + I L + + Sbjct: 130 LFTAERGSGAFFNDRRCRVSARRRLEDCVIATGMPHLGRPGHGTYLIELRNVMAEVSGIR 189 Query: 204 SISSLCLRILMIASGEVDVLIVDRNANDWDLAAADLLLECSGGALVDIDRKLLTYNRSQV 263 + L + +A+G D D WD+AA L++ +GG + D + + Sbjct: 190 RFGTAALDLAYVAAGRTDGFWEDNL-QIWDMAAGILMVREAGGFVTDKEGGNDIFR---- 244 Query: 264 NHEVLFASAKWH 275 ++ + Sbjct: 245 KKNIIAGNEHIR 256 >1jp4_A 3'(2'),5'-bisphosphate nucleotidase; protein-product complex, sugar nucleotidase fold, hydrolase; HET: AMP; 1.69A {Rattus norvegicus} SCOP: e.7.1.1 PDB: 2wef_A* Length = 308 Score = 115 bits (289), Expect = 8e-27 Identities = 41/280 (14%), Positives = 89/280 (31%), Gaps = 39/280 (13%) Query: 35 LDIVRSAVQGASTVAMQYFLR-SPNVWWKHEGSSPVCDADIAVNDYLESFLRPLRPAYGW 93 + S Q A T+ + K + AD V + S L P Sbjct: 12 VASAYSIAQKAGTIVRCVIAEGDLGIVQKTSATDLQTKADRMVQMSICSSLSRKFPKLTI 71 Query: 94 LSEETDDDLQ-------------------------RLNYETLFVVDPIDGTRAFIEGRNE 128 + EE + + + VDP+DGT+ + EG + Sbjct: 72 IGEEDLPPGEVDQELIEDGQSEEILKQPCPSQYSAIKEEDLVVWVDPVDGTKEYTEGLLD 131 Query: 129 -WCISVAVVHHGRPVIGVVHASALGKEFFVSVGMKSTCNGKNISVS---------SNQMS 178 + + + + G+ + G+++ + + T G + + + Sbjct: 132 NVTVLIGIAYEGKAIAGIINQPYYNYQAGPDAVLGRTIWGVLGLGAFGFQLKEAPAGKHI 191 Query: 179 DSLAIMASDVSLKGLDSYVRFRRQSSISSLCLRILMIASGEVDVLI-VDRNANDWDLAAA 237 + S+ + + + + +I+ + G+ + WD A Sbjct: 192 ITTTRSHSNKLVTDCIAAMNPDNVLRVGGAGNKIIQLIEGKASAYVFASPGCKKWDTCAP 251 Query: 238 DLLLECSGGALVDIDRKLLTYNR--SQVNHEVLFASAKWH 275 +++L GG L DI L Y++ +N + A+ + + Sbjct: 252 EVILHAVGGKLTDIHGNPLQYDKEVKHMNSAGVLAALRNY 291 >1g0h_A Inositol monophosphatase; homodimer, complexed with Ca2+ and I-1-P, hydrolase; HET: IPD; 2.30A {Methanocaldococcus jannaschii} SCOP: e.7.1.1 PDB: 1dk4_A* 1g0i_A* Length = 252 Score = 109 bits (273), Expect = 7e-25 Identities = 41/246 (16%), Positives = 86/246 (34%), Gaps = 10/246 (4%) Query: 30 EWKQDLDIVRSAVQGASTVAMQYFLRSPN--VWWKHEGSSPVCDADIAVNDYLESFLRPL 87 +W +I ++ + + YF R V D D +L+ Sbjct: 2 KW---DEIGKNIAKEIEKEILPYFGRKDKSYVVGTSPSGDETEIFDKISEDIALKYLK-- 56 Query: 88 RPAYGWLSEETDDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVH 147 +SEE + E V+DPIDG+ FI G + V + P G+ + Sbjct: 57 SLNVNIVSEELGVI--DNSSEWTVVIDPIDGSFNFINGIPFFAFCFGVFKNNEPYYGLTY 114 Query: 148 ASALGKEFFVSVGMKSTCNGKNISVSSNQMSDSLAIMASDVSLKGLDSYVRFRRQSSISS 207 + G + NG+ I V ++ + + + +R + Sbjct: 115 EFLTKSFYEAYKGKGAYLNGRKIKVKDFNPNNIVISYYPSKKIDLEKLRNKVKRVRIFGA 174 Query: 208 LCLRILMIASGEVDVLIVDR-NANDWDLAAADLLLECSGGALVDIDRKLLTYNRSQVNHE 266 L + +A G +D + R D+A++ ++ + +G + D + L ++ + + Sbjct: 175 FGLEMCYVAKGTLDAVFDVRPKVRAVDIASSYIICKEAGALITDENGDELKFDLNATDRL 234 Query: 267 VLFASA 272 + + Sbjct: 235 NIIVAN 240 >1lbv_A Fbpase/impase, fructose 1,6-bisphosphatase/inositol monophosphatase; dual activity, archaeal phosphatase, APO- form, hydrolase; 1.80A {Archaeoglobus fulgidus} SCOP: e.7.1.1 PDB: 1lbw_A 1lbx_A* 1lby_A* 1lbz_A* Length = 252 Score = 107 bits (268), Expect = 3e-24 Identities = 50/249 (20%), Positives = 89/249 (35%), Gaps = 21/249 (8%) Query: 32 KQDLDIVRSAVQ--GASTVAMQYFLRSPNVWWKHEGSSPVCDADIAVNDYLESFLRPLRP 89 + L I R + +M R +V +G+ P AD D LR + Sbjct: 4 RDALRISREIAGEVRKAIASMPLRERVKDVGMGKDGT-PTKAADRVAEDAALEILR--KE 60 Query: 90 AYGWLSEETDDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVH---HGRPVIGVV 146 ++EE+ + +DP+DGT G + +S+ + G V Sbjct: 61 RVTVVTEESGV---LGEGDVFVALDPLDGTFNATRGIPVYSVSLCFSYSDKLKDAFFGYV 117 Query: 147 HASALGKEFFVSVGMKSTCNGKNISVSSNQMSDSLAIMASDVSLKGLDSYVRFRRQSSIS 206 + A G E++ + NG+ I VS + AI+ D F+R Sbjct: 118 YNLATGDEYYA-DSSGAYRNGERIEVSDAEELYCNAIIYYP------DRKFPFKRMRIFG 170 Query: 207 SLCLRILMIASGEVDVLI---VDRNANDWDLAAADLLLECSGGALVDIDRKLLTYNRSQV 263 S + A G D + + +D AA + E +GG + ++D + L + + Sbjct: 171 SAATELCFFADGSFDCFLDIRPGKMLRIYDAAAGVFIAEKAGGKVTELDGESLGNKKFDM 230 Query: 264 NHEVLFASA 272 + +A Sbjct: 231 QERLNIVAA 239 >1inp_A Inositol polyphosphate 1-phosphatase; hydrolase(phosphoric monoester); 2.30A {Bos taurus} SCOP: e.7.1.1 Length = 400 Score = 88.1 bits (217), Expect = 2e-18 Identities = 35/203 (17%), Positives = 67/203 (33%), Gaps = 45/203 (22%) Query: 111 FVVDPIDGTRAFIEGRNEWC----------------ISVAVVHHGRPVIGVVHASALGKE 154 VDPID T +I+G + I V + G P++GV++ + ++ Sbjct: 150 IWVDPIDSTYQYIKGSADITPNQGIFPSGLQCVTVLIGVYDIQTGVPLMGVINQPFVSQD 209 Query: 155 FFVSV----------GMKSTCNGKNISVSSNQMSDSLAIMASDVSLKGLDSYVRFRRQSS 204 + + + VS+ S++ + + S +G + S Sbjct: 210 LHTRRWKGQCYWGLSYLGTNIHSLLPPVSTRSNSEAQSQGTQNPSSEGSCRFSVVISTSE 269 Query: 205 ------------------ISSLCLRILMIASGEVDVLI-VDRNANDWDLAAADLLLECSG 245 + + L + G D+ I + WD AA +L G Sbjct: 270 KETIKGALSHVCGERIFRAAGAGYKSLCVILGLADIYIFSEDTTFKWDSCAAHAILRAMG 329 Query: 246 GALVDIDRKLLTYNRSQVNHEVL 268 G +VD+ L + ++ L Sbjct: 330 GGMVDLKECLERNPDTGLDLPQL 352 Score = 35.0 bits (79), Expect = 0.021 Identities = 13/93 (13%), Positives = 32/93 (34%), Gaps = 2/93 (2%) Query: 36 DIVRSAVQGASTVAMQYFLRSPNVWWKHEGSSPVCDADIAVNDYLESFLRPLRPAYGW-- 93 +I R+ Q + + + K AD+ V + ++ + P G Sbjct: 17 NIARACRQQETLFQLLIEEKKEGEKNKKFAVDFKTLADVLVQEVIKENMENKFPGLGKKI 76 Query: 94 LSEETDDDLQRLNYETLFVVDPIDGTRAFIEGR 126 EE+++ L + + + P + + + Sbjct: 77 FGEESNELTNDLGEKIIMRLGPTEEETVALLSK 109 >3b8b_A CYSQ, sulfite synthesis pathway protein; 3'-phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase, structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} Length = 292 Score = 87.7 bits (216), Expect = 3e-18 Identities = 50/275 (18%), Positives = 102/275 (37%), Gaps = 37/275 (13%) Query: 31 WKQDLDIVRSAVQGASTVAMQYFLRSPN---VWWKHEGSSPVCDADIAVNDYLESFLRPL 87 ++ + A A + + + + K + S P+ AD ++ + + L Sbjct: 20 FQSNAMAAIDAALKAGEKILSIYEDPKSDFEIERKADNS-PLTIADRKAHEAIVAILNET 78 Query: 88 RPAYGWLSEETDDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVH 147 + D R ++TL++VDP+DGT+ FI+ E+ +++A+V + PV+GV++ Sbjct: 79 PFPVLSEEGKHMDYAVRRGWDTLWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPVMGVIY 138 Query: 148 ASALGKEFFVSVGMKSTCNGKNISVSSNQMSDSLAIMASDVS------------------ 189 + +F G + + + ++ I S+ Sbjct: 139 VPVKKELYFAVEGTGAYKCSGIVGLEDEGVTLQQMIEKSERMPLADARDHFIAVASRSHL 198 Query: 190 ----------LKGLDSYVRFRRQSSISSLCLRILMIASGEVDVLIVDRNANDWDLAAADL 239 LK V S ++I ++A G+ DV +WD AA Sbjct: 199 TPETETYIADLKKKHGNVELISSGS----SIKICLVAEGKADVYPRFAPTMEWDTAAGHA 254 Query: 240 LLECSGGALVDIDR-KLLTYNRSQVNHEVLFASAK 273 + +G + + + L YN+ + + AK Sbjct: 255 IARAAGMEVYQAGKEEPLRYNKEDLLNPWFIVEAK 289 >2bji_A Inositol-1(OR 4)-monophosphatase; hydrolase, aspartic proteinase mechanism, aspartyl protease, succinimide, zymogen; 1.30A {Bos taurus} PDB: 1imb_A* 1ima_A* 1imc_A 1imd_A 1ime_A 1imf_A 2hhm_A 1awb_A Length = 277 Score = 87.4 bits (215), Expect = 3e-18 Identities = 49/270 (18%), Positives = 107/270 (39%), Gaps = 19/270 (7%) Query: 31 WKQDLDIVRSAVQGASTVAMQYFLRSPNVWWKHEGSSPVCDADIAVNDYLESFLRPLRPA 90 W++ +D + A V + N+ K + V D V L + ++ P+ Sbjct: 5 WQECMDYAVTLAGQAGEVVREALKNEMNIMVKSSPADLVTATDQKVEKMLITSIKEKYPS 64 Query: 91 YGWLSEETDDDL--QRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVHA 148 + ++ EE+ L +++DPIDGT F+ G +S+ V + + G+V++ Sbjct: 65 HSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIVYS 124 Query: 149 SALGKEFFVSVGMKSTCNGKNISVSSNQMSDSLAIMASDVSLKGLDSY------------ 196 K + G + CNG+ + VS + ++ S + ++ Sbjct: 125 CLEDKMYTGRKGKGAFCNGQKLQVSHQEDITKSLLVTELGSSRTPETVRIILSNIERLLC 184 Query: 197 VRFRRQSSISSLCLRILMIASGEVDVLIVDRNANDWDLAAADLLLECSGGALVDIDRKLL 256 + + + L + ++A+G D + + WD+A A +++ +GG L+D+ Sbjct: 185 LPIHGIRGVGTAALNMCLVAAGAADA-YYEMGIHCWDVAGAGIIVTEAGGVLLDVTGGPF 243 Query: 257 TYNRSQVNHEVLFASAKWHFPSFKQHLSTL 286 + V+ +S K + + + Sbjct: 244 DLM----SRRVIASSNKTLAERIAKEIQII 269 >1ka1_A Halotolerance protein HAL2; nucleotidase, salt tolerance, inositol, hydrolase; HET: A3P; 1.30A {Saccharomyces cerevisiae} SCOP: e.7.1.1 PDB: 1k9y_A 1ka0_A* 1k9z_A* 1qgx_A* Length = 357 Score = 86.7 bits (213), Expect = 5e-18 Identities = 46/335 (13%), Positives = 99/335 (29%), Gaps = 96/335 (28%) Query: 32 KQDLDIVRSAVQGASTVAMQYFL-----RSPNVWWKHEGSSPVCDADIAVNDYLESFLRP 86 +++L + AV+ AS + + + K++ S PV D A + + ++ Sbjct: 4 ERELLVATQAVRKASLLTKRIQSEVISHKDSTTITKNDNS-PVTTGDYAAQTIIINAIKS 62 Query: 87 LRPAYGWLSEETDDDLQRLNYETL------------------------------------ 110 P + EE+ L + Sbjct: 63 NFPDDKVVGEESSSGLSDAFVSGILNEIKANDEVYNKNYKKDDFLFTNDQFPLKSLEDVR 122 Query: 111 ----------------FVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVHASALGKE 154 + +DPIDGT+ F+ G + + +A++ G +G + L Sbjct: 123 QIIDFGNYEGGRKGRFWCLDPIDGTKGFLRGEQ-FAVCLALIVDGVVQLGCIGCPNLVLS 181 Query: 155 FFVSVGMKSTCN-----------------------GKNISVSSNQMSDSLAIMASDVSLK 191 + + +K + I V + + + + Sbjct: 182 SYGAQDLKGHESFGYIFRAVRGLGAFYSPSSDAESWTKIHVRHLKDTKDMITLEGVEKGH 241 Query: 192 GLDSYVRFRRQSSISSLCLRI------LMIASGEVDVLI-----VDRNANDWDLAAADLL 240 + S L + ++A G DV + + WD AA +++ Sbjct: 242 SSHDEQTAIKNKLNISKSLHLDSQAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNVI 301 Query: 241 LECSGGALVD-IDRKLLTYNRSQV--NHEVLFASA 272 + +GG D ++ L + + V+ +S Sbjct: 302 VHEAGGIHTDAMEDVPLDFGNGRTLATKGVIASSG 336 >2fvz_A Inositol monophosphatase 2; inositol metabolism, structural genomics, structural genomics consortium, SGC, hydrolase; 2.40A {Homo sapiens} PDB: 2czh_A 2czi_A 2czk_A 2ddk_A Length = 273 Score = 80.9 bits (198), Expect = 3e-16 Identities = 54/270 (20%), Positives = 98/270 (36%), Gaps = 19/270 (7%) Query: 31 WKQDLDIVRSAVQGASTVAMQYFLRSPNVWWKHEGSSPVCDADIAVNDYLESFLRPLRPA 90 W++ A + + V K + V + D V D + S LR P+ Sbjct: 1 WEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPS 60 Query: 91 YGWLSEETDDDLQ--RLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVHA 148 + +++EE L + +++DPIDGT F+ +S+ GV++ Sbjct: 61 HRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYH 120 Query: 149 SALGKEFFVSVGMKSTCNGKNISVSSNQMSDSLAIMASDVSLKGLDS------------Y 196 + + G + CNG+ + VS ++ + + + Sbjct: 121 CTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLH 180 Query: 197 VRFRRQSSISSLCLRILMIASGEVDVLIVDRNANDWDLAAADLLLECSGGALVDIDRKLL 256 + I S L + +ASG D + WDLAAA +++ +GG ++D L Sbjct: 181 AKAHGVRVIGSSTLALCHLASGAADA-YYQFGLHCWDLAAATVIIREAGGIVIDTSGGPL 239 Query: 257 TYNRSQVNHEVLFASAKWHFPSFKQHLSTL 286 V+ AS + Q L T+ Sbjct: 240 DLM----ACRVVAASTREMAMLIAQALQTI 265 >2p3n_A Inositol-1-monophosphatase; tetramer, hydrolase; 2.20A {Thermotoga maritima MSB8} PDB: 2p3v_A* Length = 256 Score = 79.6 bits (195), Expect = 6e-16 Identities = 61/246 (24%), Positives = 100/246 (40%), Gaps = 13/246 (5%) Query: 34 DLDIVRSAVQGASTVAMQYFLRSPNVWWKHEGSSPVCDADIAVNDYLESFLRPLRPAYGW 93 LD ++ + M ++ R NV K V + D + +R P Sbjct: 3 RLDFSIKLLRKVGHLLMIHWGRVDNVEKKTGFKDIVTEIDREAQRMIVDEIRKFFPDENI 62 Query: 94 LSEETDDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVHASALGK 153 ++EE + + L+++DPIDGT F+ G + IS+A V +G +GVVHA AL + Sbjct: 63 MAEEGIFE----KGDRLWIIDPIDGTINFVHGLPNFSISLAYVENGEVKLGVVHAPALNE 118 Query: 154 EFFVSVGMKSTCNGKNISV----SSNQMSDSLAIMASDVSLKGLDSYVRFRRQSSISSLC 209 + G + NG+ I V S + S R RR + S Sbjct: 119 TLYAEEGSGAFFNGERIRVSENASLEECVGSTGSYVDFTGKFIERMEKRTRRIRILGSAA 178 Query: 210 LRILMIASGEVDVLIVDRNANDWDLAAADLLLECSGGALVDIDRKLLTYNRSQVNHEVLF 269 L + +G VD V N WD+AA ++++ +GG + D K + +F Sbjct: 179 LNAAYVGAGRVDF-FVTWRINPWDIAAGLIIVKEAGGMVTDFSGKEANAF----SKNFIF 233 Query: 270 ASAKWH 275 ++ H Sbjct: 234 SNGLIH 239 >2qfl_A Inositol-1-monophosphatase; impase extragenic suppressor, dimerization, hydrolase; 1.90A {Escherichia coli} Length = 267 Score = 77.7 bits (190), Expect = 3e-15 Identities = 50/252 (19%), Positives = 95/252 (37%), Gaps = 17/252 (6%) Query: 35 LDIVRSAVQGASTVAMQYFLRSPNVWWKHEGS-SPVCDADIAVNDYLESFLRPLRPAYGW 93 L+I A + A + + + V +GS V + D A + +R P + Sbjct: 5 LNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTI 64 Query: 94 LSEETDDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVHASALGK 153 + E +L+ + + +V+DP+DGT FI+ + +S+AV GR + VV+ + Sbjct: 65 I-TEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNE 123 Query: 154 EFFVSVGMKSTCNGKNISVSSNQMSDSLAIMASDVSLKGLDSYVRFRRQS---------- 203 F + G + NG + S+ + D + + Sbjct: 124 LFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQYATTYINIVGKLFNECADFR 183 Query: 204 SISSLCLRILMIASGEVDVLIVDRNANDWDLAAADLLLECSGGALVDIDRKLLTYNRSQV 263 + S L + +A+G VD + WD AA +LL+ +GG + D Sbjct: 184 ATGSAALDLAYVAAGRVDG-FFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYML---- 238 Query: 264 NHEVLFASAKWH 275 ++ + + Sbjct: 239 TGNIVAGNPRVV 250 >2pcr_A Inositol-1-monophosphatase; bipolar disorder, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.60A {Aquifex aeolicus VF5} Length = 264 Score = 75.8 bits (185), Expect = 1e-14 Identities = 46/239 (19%), Positives = 94/239 (39%), Gaps = 14/239 (5%) Query: 28 MYEWKQDLDIVRSAVQGASTVAMQYFLRSPNVWWKHEG-SSPVCDADIAVNDYLESFLRP 86 M K+ L++ + A V + F + + +G V D + ++ + Sbjct: 1 MENLKKYLEVAKIAALAGGQVLKENFGKVKKENIEEKGEKDFVSYVDKTSEERIKEVILK 60 Query: 87 LRPAYGWLSEETDDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVV 146 P + + EE + Y + +DP+DGT+ +I G + +SV +V P++G V Sbjct: 61 FFPDHEVVGEEMGAEGSGSEYR--WFIDPLDGTKNYINGFPIFAVSVGLVKGEEPIVGAV 118 Query: 147 HASALGKEFFVSVGMKSTCNGKNISVSSNQMSDSLAIMASDVSLKGLDS----------Y 196 + K ++ + G+ + NGK I V N+ ++ S D + Sbjct: 119 YLPYFDKLYWGAKGLGAYVNGKRIKVKDNESLKHAGVVYGFPSRSRRDISIYLNIFKDVF 178 Query: 197 VRFRRQSSISSLCLRILMIASGEVDVLIVDRNANDWDLAAADLLLECSGGALVDIDRKL 255 + + + M+A G D ++ + WD+ A ++L+ +GG + Sbjct: 179 YEVGSMRRPGAAAVDLCMVAEGIFDGMM-EFEMKPWDITAGLVILKEAGGVYTLVGEPF 236 >2q74_A Inositol-1-monophosphatase; alpha-beta-alpha-beta-alpha sandwich, hydrolase; 2.60A {Mycobacterium tuberculosis H37RV} Length = 299 Score = 67.4 bits (163), Expect = 3e-12 Identities = 48/258 (18%), Positives = 83/258 (32%), Gaps = 27/258 (10%) Query: 30 EWKQDLDIVRSAVQGASTVAMQYFLRSPNVWWKHEG----------SSPVCDADIAVNDY 79 E + + + A+ + +G + PV D Sbjct: 7 EPARLRSVAENLAAEAAAFVRGRRAEVFGISRAGDGDGAVRAKSSPTDPVTVVDTDTERL 66 Query: 80 LESFLRPLRPAYGWLSEET---DDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVV 136 L L LRP L EE D + +V+DPIDGT F+ G + +S+ Sbjct: 67 LRDRLAQLRPGDPILGEEGGGPADVTATPSDRVTWVLDPIDGTVNFVYGIPAYAVSIGAQ 126 Query: 137 HHGRPVIGVVHASALGKEFFVSVGMKSTCNG------------KNISVSSNQMSDSLAIM 184 G V G V A + + G+ + +S++ ++ Sbjct: 127 VGGITVAGAVADVAARTVYSAATGLGAHLTDERGRHVLRCTGVDELSMALLGTGFGYSVR 186 Query: 185 ASDVSLKGLDSYV-RFRRQSSISSLCLRILMIASGEVDVLIVDRNANDWDLAAADLLLEC 243 + + L V R I S L + M+A+G +D + WD AA L+ Sbjct: 187 CREKQAELLAHVVPLVRDVRRIGSAALDLCMVAAGRLDAYY-EHGVQVWDCAAGALIAAE 245 Query: 244 SGGALVDIDRKLLTYNRS 261 +G ++ + Sbjct: 246 AGARVLLSTPRAGGAGLV 263 >1vdw_A Hypothetical protein PH1897; homodimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; 1.30A {Pyrococcus horikoshii} SCOP: e.7.1.1 Length = 254 Score = 58.9 bits (141), Expect = 1e-09 Identities = 51/244 (20%), Positives = 92/244 (37%), Gaps = 10/244 (4%) Query: 32 KQDLDIVRSAVQGASTVAMQYF--LRSPNVWWKHEGSSPVCDADIAVNDYLESFLRPLRP 89 K I ++ M F ++ D + + S + L Sbjct: 4 KTWRKIAIDIIRDFDHNIMPLFGNPKASETISISPSGDETKVVDKVAENIIISKFKDLGV 63 Query: 90 AYGWLSEETDDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGVVHAS 149 +SEE Q + VVDP+DG+ FI G + +SVA+ H P+ ++ Sbjct: 64 --NVVSEEIGRIDQ--GSDYTVVVDPLDGSYNFINGIPFFAVSVAIFHEKDPIYAFIYEP 119 Query: 150 ALGKEFFVSVGMKSTCNGKNISVSSNQMSDSLAIMASDVSLKGLDSYVRFRRQSSISSLC 209 + + + G S NG+ I V S++ K +D R R + ++ Sbjct: 120 IVERLYEGIPGKGSYLNGEKIKVRELAEKPSISFYTKGKGTKIIDKVKRTRT---LGAIA 176 Query: 210 LRILMIASGEVDVLIVDRNA-NDWDLAAADLLLECSGGALVDIDRKLLTYNRSQVNHEVL 268 L + +A G +D ++ RN D+AA ++ +G + D+D K + S + Sbjct: 177 LELAYLARGALDAVVDIRNYLRPTDIAAGVVIAREAGAIVKDLDGKDVEITFSATEKVNI 236 Query: 269 FASA 272 A+ Sbjct: 237 IAAN 240 >1xi6_A Extragenic suppressor; structural genomics, southeast collaboratory for structural genomics hyperthermophIle, PSI; 2.80A {Pyrococcus furiosus} SCOP: e.7.1.1 Length = 262 Score = 52.0 bits (123), Expect = 2e-07 Identities = 43/247 (17%), Positives = 84/247 (34%), Gaps = 10/247 (4%) Query: 28 MYEWKQDLDIVRSAVQGASTVAMQYF--LRSPNVWWKHEGSSPVCDADIAVNDYLESFLR 85 + W+ ++ + T M +F + D D + S + Sbjct: 11 LKFWR---EVAIDIISDFETTIMPFFGNPDGGKLVKISPSGDETKLVDKLAEDLILSRIT 67 Query: 86 PLRPAYGWLSEETDDDLQRLNYETLFVVDPIDGTRAFIEGRNEWCISVAVVHHGRPVIGV 145 +SEE Y +VDP+DG+ FI G + +S+AV +P+ + Sbjct: 68 --ELGVNVVSEEVGVIDNESEYT--VIVDPLDGSYNFIAGIPFFALSLAVFKKDKPIYAI 123 Query: 146 VHASALGKEFFVSVGMKSTCNGKNISVSSNQMSDSLAIMASDVSLKGLDSYVRFRRQSSI 205 ++ + F G + NGK I V S + +V+ R Sbjct: 124 IYEPMTERFFEGIPGEGAFLNGKRIKVRKTPDEKPSISFYSRGKGHEIVKHVKRTRTLGA 183 Query: 206 SSLCLRILMIASGEVDVLIVDRNANDWDLAAADLLLECSGGALVDIDRKLLTYNRSQVNH 265 +L + V+ V + D+AA ++ + +G + D K + + + + Sbjct: 184 IALE-LAYLAMGALDGVVDVRKYVRPTDIAAGTIIAKEAGALIKDSAGKDIDISFNATDR 242 Query: 266 EVLFASA 272 + A Sbjct: 243 LDVIAVN 249 >2pff_B Fatty acid synthase subunit beta; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 2006 Score = 43.0 bits (101), Expect = 7e-05 Identities = 35/220 (15%), Positives = 76/220 (34%), Gaps = 73/220 (33%) Query: 33 QDLDIVRSAVQGASTVAMQYFLRSPNVWWKH--EGSSPVCDADIAV-------NDYLESF 83 + +++++ + + +S + ++ EG++ + +A+ +DY E Sbjct: 118 KTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQL----VAIFGGQGNTDDYFEE- 172 Query: 84 LRPLRPAYGWLSEE----TDDDLQRLNYETLFVVDPIDGTRAFIEGRN--EW-------- 129 LR L Y L + + + L L + +D + F +G N EW Sbjct: 173 LRDLYQTYHVLVGDLIKFSAETLSEL------IRTTLDAEKVFTQGLNILEWLENPSNTP 226 Query: 130 ----CISVAVVHHGRPVIGVV---HASALGKEFFVSVGMKSTCNGKNISVSSNQMSDSLA 182 +S+ + P+IGV+ H + V T K + + ++ L Sbjct: 227 DKDYLLSIPI---SCPLIGVIQLAH-------YVV------TA--KLLGFTPGELRSYLK 268 Query: 183 ---------IMASDVSLKGLDSYVRFRRQSSISSLCLRIL 213 + A ++ DS+ F + +L Sbjct: 269 GATGHSQGLVTAVAIA--ETDSWESFFVS---VRKAITVL 303 Score = 38.0 bits (88), Expect = 0.003 Identities = 56/304 (18%), Positives = 87/304 (28%), Gaps = 123/304 (40%) Query: 38 VRSAVQGASTVAMQYFLRSPNVWWKHEGSSP--VCDADIAVNDYLESFLRPLRPAY---- 91 +RS ++GA+ G S V IA D ESF +R A Sbjct: 263 LRSYLKGAT------------------GHSQGLVTAVAIAETDSWESFFVSVRKAITVLF 304 Query: 92 --GWLSEETDDDLQRLNYETLF-----VVDPIDGTRAFIEGRNEWCISV------AVVHH 138 G E Y + D ++ EG +S+ V + Sbjct: 305 FIGVRCYEA--------YPNTSLPPSILEDSLENN----EGVPSPMLSISNLTQEQVQDY 352 Query: 139 GRPVIGVVHASALGKEFFVSVGMKSTCNG-KNISVSSNQMSDSLAIMASDVSLKGLDSYV 197 + ++ L V + S NG KN+ VS S L GL+ + Sbjct: 353 ----VNKTNSH-LPAGKQVEI---SLVNGAKNLVVSGPPQS-----------LYGLNLTL 393 Query: 198 R--------------FR-RQSSISSLCLRILMIAS--------GEVDVLIVDRNANDWDL 234 R F R+ S+ R L +AS D++ D N+ Sbjct: 394 RKAKAPSGLDQSRIPFSERKLKFSN---RFLPVASPFHSHLLVPASDLINKDLVKNNVSF 450 Query: 235 AAADLL-----------LECSGGALVDIDRKLLTYNRSQVNHEVLFASAKW----HFPSF 279 A D+ L G++ + + R V W F + Sbjct: 451 NAKDIQIPVYDTFDGSDLRVLSGSISERIVDCII--RLPVK---------WETTTQFKA- 498 Query: 280 KQHL 283 H+ Sbjct: 499 -THI 501 >1keh_A Precursor of cephalosporin acylase; glutaryl-7-ACA, hydrolase; 2.50A {Brevundimonas diminuta} SCOP: d.153.1.2 PDB: 1oqz_A Length = 689 Score = 26.7 bits (58), Expect = 6.0 Identities = 14/124 (11%), Positives = 33/124 (26%), Gaps = 18/124 (14%) Query: 39 RSAVQGASTVAMQYFLRSPNVWWKHEGSSPVCDADIA---------VNDYLESFLRPLRP 89 + G +L + V + + D +N Y + + P Sbjct: 65 GAEYWGPDYEQTTVWLLTNGVPERAQQWYAQQSPDFRANLDAFAAGINAYAQQNPDDISP 124 Query: 90 AYGWLSEETDDDLQRLNYETLFVVDPIDGTRAFIE---------GRNEWCISVAVVHHGR 140 + + D+ + + + R E G N W ++ +G Sbjct: 125 EVRQVLPVSGADVVAHAHRLMNFLYVASPGRTLGEGDPPDLADQGANSWAVAPGKTANGN 184 Query: 141 PVIG 144 ++ Sbjct: 185 ALLL 188 >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 Score = 26.7 bits (58), Expect = 6.2 Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 4/26 (15%) Query: 88 RPAYGWLSEET----DDDLQRLNYET 109 RP GW+ +T DD + YET Sbjct: 871 RPYTGWVDSKTKEPVDDKDVKAKYET 896 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.322 0.136 0.420 Gapped Lambda K H 0.267 0.0536 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 2,532,483 Number of extensions: 112696 Number of successful extensions: 381 Number of sequences better than 10.0: 1 Number of HSP's gapped: 359 Number of HSP's successfully gapped: 25 Length of query: 286 Length of database: 5,693,230 Length adjustment: 91 Effective length of query: 195 Effective length of database: 3,487,026 Effective search space: 679970070 Effective search space used: 679970070 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 56 (25.8 bits)