HHsearch alignment for GI: 254780405 and conserved domain: COG0742

>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair].
Probab=100.00  E-value=0  Score=378.52  Aligned_cols=183  Identities=39%  Similarity=0.773  Sum_probs=167.1

Q ss_pred             CEEEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHH
Q ss_conf             01998641088674437888867785899999998776333645589678611001222100110168733011100012
Q gi|254780405|r    3 KIRIIGGKFQRRLLHTPQNRSIRPSDSRTKKALFDILTHVYPVFLDSTRMLNIFAGTGSVGFEALSRGCHYVLFVDNNSE   82 (189)
Q Consensus         3 ~mrii~G~~kg~~l~~~~~~~~RPt~~~vrealFniL~~~~~~~~~~~~vlDlfaGsG~lgiEalSrGA~~v~~vE~~~~   82 (189)
T Consensus         1 ~mRIi~G~~kgr~L~~p~~~~~RPT~drVREalFNil~~~---~i~g~~~LDlFAGSGaLGlEAlSRGA~~~~~vE~~~~   77 (187)
T COG0742           1 QMRIIGGKYKGRKLKTPDGPGTRPTTDRVREALFNILAPD---EIEGARVLDLFAGSGALGLEALSRGAARVVFVEKDRK   77 (187)
T ss_pred             CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC---CCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHH
T ss_conf             9399802406977257999986887168889999873434---4579889994687647689998578856999965989


Q ss_pred             HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHCCHHHHHHHHH--HCCCCCCCEEEEEECCCC
Q ss_conf             35667642001332210022344566542100344-443101513431000288898887--448888974999981778
Q gi|254780405|r   83 SIRLIRRNSELLGVEKNCNIFFRDVLRLGKIGNIS-PFQLVYLDPPYGQGLAQQALAIID--KEGWLEPNALVIIEEYAG  159 (189)
Q Consensus        83 a~~~lk~N~~~~~~~~~~~ii~~D~~~~~~~~~~~-~fDiIf~DPPY~~~~~~~~l~~l~--~~~~L~~~gliiiE~~~~  159 (189)
T Consensus        78 a~~~l~~N~~~l~~~~~~~~~~~da~~~L~~~~~~~~FDlVflDPPy~~~l~~~~~~~~~~~~~~~L~~~~~iv~E~~~~  157 (187)
T COG0742          78 AVKILKENLKALGLEGEARVLRNDALRALKQLGTREPFDLVFLDPPYAKGLLDKELALLLLEENGWLKPGALIVVEHDKD  157 (187)
T ss_pred             HHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
T ss_conf             99999999998487612599840089998722778851289968997536066899998887658778896899982787


Q ss_pred             CCC-CCCCCCEEEEEEECCCEEEEEEECCC
Q ss_conf             886-75788579998341856999865078
Q gi|254780405|r  160 TCI-SVGAAFHFLQERKYGDTKIYFFSYNP  188 (189)
Q Consensus       160 ~~~-~~~~~~~~~~~k~yG~t~i~f~~~np  188 (189)
T Consensus       158 ~~~~~~~~~~~~~r~k~yG~t~l~~y~~~~  187 (187)
T COG0742         158 VELPELPANFELHREKKYGQTKLTFYRREE  187 (187)
T ss_pred             CCCCCCCCCEEEEEEEECCCEEEEEEEECC
T ss_conf             775656787389987244977999999459