HHsearch alignment for GI: 254780405 and conserved domain: COG4122

Probab=98.97  E-value=9.3e-10  Score=78.76  Aligned_cols=120  Identities=20%  Similarity=0.263  Sum_probs=92.3

Q ss_pred             CHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHH---HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf             858999999987763336455896786110012221001---10168733011100012356676420013322100223
Q gi|254780405|r   27 SDSRTKKALFDILTHVYPVFLDSTRMLNIFAGTGSVGFE---ALSRGCHYVLFVDNNSESIRLIRRNSELLGVEKNCNIF  103 (189)
Q Consensus        27 t~~~vrealFniL~~~~~~~~~~~~vlDlfaGsG~lgiE---alSrGA~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii  103 (189)
T Consensus        42 i~~~e~g~~L~~L~~~----~~~k~iLEiGT~~GySal~mA~~l~-~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~  116 (219)
T COG4122          42 IIDPETGALLRLLARL----SGPKRILEIGTAIGYSALWMALALP-DDGRLTTIERDEERAEIARENLAEAGVDDRIELL  116 (219)
T ss_pred             CCCHHHHHHHHHHHHH----CCCCEEEEEECCCCHHHHHHHHHCC-CCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             8781489999999973----4986499963523799999996388-8976999707989999999999975976528988


Q ss_pred             H-HHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             4-456654210034444310151343100028889888744888897499998
Q gi|254780405|r  104 F-RDVLRLGKIGNISPFQLVYLDPPYGQGLAQQALAIIDKEGWLEPNALVIIE  155 (189)
Q Consensus       104 ~-~D~~~~~~~~~~~~fDiIf~DPPY~~~~~~~~l~~l~~~~~L~~~gliiiE  155 (189)
T Consensus       117 ~~gdal~~l~~~~~~~fDliFIDa--dK~~yp~~le~~~~--lLr~GGliv~D  165 (219)
T COG4122         117 LGGDALDVLSRLLDGSFDLVFIDA--DKADYPEYLERALP--LLRPGGLIVAD  165 (219)
T ss_pred             ECCCHHHHHHHCCCCCCCEEEEEC--CHHHCHHHHHHHHH--HHCCCCEEEEE
T ss_conf             357479999733478856899837--84359999999999--73789689983