HHsearch alignment for GI: 254780405 and conserved domain: KOG1253

Probab=98.08  E-value=1.1e-06  Score=60.47  Aligned_cols=103  Identities=26%  Similarity=0.305  Sum_probs=78.7

Q ss_pred             CCCCEEEECCCCCCCCHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH--HCCCCCCCCC
Q ss_conf             589678611001222100110--168733011100012356676420013322100223445665421--0034444310
Q gi|254780405|r   47 LDSTRMLNIFAGTGSVGFEAL--SRGCHYVLFVDNNSESIRLIRRNSELLGVEKNCNIFFRDVLRLGK--IGNISPFQLV  122 (189)
Q Consensus        47 ~~~~~vlDlfaGsG~lgiEal--SrGA~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~~D~~~~~~--~~~~~~fDiI  122 (189)
T Consensus       108 ~~~l~vLealsAtGlrslRya~El~~v~~v~AnD~~~~aV~~i~~Nv~~N~v~~ive~~~~DA~~lM~~~~~~~~~FDvI  187 (525)
T KOG1253         108 EKSLRVLEALSATGLRSLRYAKELPGVRQVVANDLNENAVTSIQRNVELNGVEDIVEPHHSDANVLMYEHPMVAKFFDVI  187 (525)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCCCCCCCCCEE
T ss_conf             67500898764551788899887042453103678777889998665506732211244102778987564521246667


Q ss_pred             CCCHHHHH--CCHHHHHHHHHHCCCCCCCEEEEEEC
Q ss_conf             15134310--00288898887448888974999981
Q gi|254780405|r  123 YLDPPYGQ--GLAQQALAIIDKEGWLEPNALVIIEE  156 (189)
Q Consensus       123 f~DPPY~~--~~~~~~l~~l~~~~~L~~~gliiiE~  156 (189)
T Consensus       188 DLDP-yGs~s~FLDsAvqav------~~gGLL~vT~  216 (525)
T KOG1253         188 DLDP-YGSPSPFLDSAVQAV------RDGGLLCVTC  216 (525)
T ss_pred             ECCC-CCCCCHHHHHHHHHH------HCCCEEEEEE
T ss_conf             2378-899627799999986------4087799982