HHsearch alignment for GI: 254780405 and conserved domain: KOG3420
>KOG3420 consensus.
Probab=99.23 E-value=3.9e-12 Score=92.85 Aligned_cols=156 Identities=15% Similarity=0.288 Sum_probs=105.8
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf 77858999999987763336455896786110012221001101687330111000123566764200133221002234
Q gi|254780405|r 25 RPSDSRTKKALFDILTHVYPVFLDSTRMLNIFAGTGSVGFEALSRGCHYVLFVDNNSESIRLIRRNSELLGVEKNCNIFF 104 (189)
Q Consensus 25 RPt~~~vrealFniL~~~~~~~~~~~~vlDlfaGsG~lgiEalSrGA~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~ 104 (189)
T Consensus 26 Y~T~p~iAasM~~~Ih~Ty-gdiEgkkl~DLgcgcGmLs~a~sm~~~e~vlGfDIdpeALEIf~rNaeEfEv--qidlLq 102 (185)
T KOG3420 26 YPTRPHIAASMLYTIHNTY-GDIEGKKLKDLGCGCGMLSIAFSMPKNESVLGFDIDPEALEIFTRNAEEFEV--QIDLLQ 102 (185)
T ss_pred CCCCHHHHHHHHHHHHHHH-CCCCCCCHHHHCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCHHHHHH--HHHEEE
T ss_conf 7996789999999998620-1204746225247611567775057873378640588999998616687523--342122
Q ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHC-CCCCCCEEEEEECCC--CCCCCCCCCCEEEEEEECCCEEE
Q ss_conf 456654210034444310151343100028889888744-888897499998177--88867578857999834185699
Q gi|254780405|r 105 RDVLRLGKIGNISPFQLVYLDPPYGQGLAQQALAIIDKE-GWLEPNALVIIEEYA--GTCISVGAAFHFLQERKYGDTKI 181 (189)
Q Consensus 105 ~D~~~~~~~~~~~~fDiIf~DPPY~~~~~~~~l~~l~~~-~~L~~~gliiiE~~~--~~~~~~~~~~~~~~~k~yG~t~i 181 (189)
T Consensus 103 cdildle~--~~g~fDtaviNppFGTk~~~aDm~fv~~al~~~~--~VySLHKtSTRey~~kLP~~ykFHK~k~-vdiaV 177 (185)
T KOG3420 103 CDILDLEL--KGGIFDTAVINPPFGTKKKGADMEFVSAALKVAS--AVYSLHKTSTREYRYKLPKLYKFHKRKE-VDIAV 177 (185)
T ss_pred EECCCHHC--CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH--HHHHHHCCCHHHHHHHCCHHHHHHHCCC-CCEEE
T ss_conf 22155110--5876766786689876434433899999999999--9998731328899985605441222023-00344
Q ss_pred EEEECCC
Q ss_conf 9865078
Q gi|254780405|r 182 YFFSYNP 188 (189)
Q Consensus 182 ~f~~~np 188 (189)
T Consensus 178 Dlirfe~ 184 (185)
T KOG3420 178 DLIRFEP 184 (185)
T ss_pred EEEEEEC
T ss_conf 5787304