HHsearch alignment for GI: 254780405 and conserved domain: PRK00536

>PRK00536 speE spermidine synthase; Provisional.
Probab=96.90  E-value=0.0015  Score=41.94  Aligned_cols=129  Identities=10%  Similarity=0.006  Sum_probs=81.7

Q ss_pred             CEEEECCCCCCCCCCHHHHHHHHH-HHHHHCC-CCCCCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             867443788886778589999999-8776333-64558967861100122210011016873301110001235667642
Q gi|254780405|r   13 RRLLHTPQNRSIRPSDSRTKKALF-DILTHVY-PVFLDSTRMLNIFAGTGSVGFEALSRGCHYVLFVDNNSESIRLIRRN   90 (189)
Q Consensus        13 g~~l~~~~~~~~RPt~~~vrealF-niL~~~~-~~~~~~~~vlDlfaGsG~lgiEalSrGA~~v~~vE~~~~a~~~lk~N   90 (189)
T Consensus        40 Gkvl-vLDG~-i--~t~~~-ef~YhEMl~Hvpl~~Hp~Pk~VLIIGGGDGG~~REvlKH~~-~v~~VEID~~Vv~~sk~y  113 (262)
T PRK00536         40 GEIA-MLNKQ-L--LFKNF-LHIESELLAHMGGCTKKELKEVLIVDGFDLELAHQLFKYDT-HVDFVQADEKILDSFISF  113 (262)
T ss_pred             CEEE-EEECE-E--EEECH-HHHHHHHHHCHHHHCCCCCCEEEEECCCCHHHHHHHHCCCC-EEEEEEECHHHHHHHHHH
T ss_conf             3179-98063-8--98600-67888887530232189978799986875599999872897-669999678999999997


Q ss_pred             HCCCCC---CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCC
Q ss_conf             001332---21002234456654210034444310151343100028889888744888897499998177
Q gi|254780405|r   91 SELLGV---EKNCNIFFRDVLRLGKIGNISPFQLVYLDPPYGQGLAQQALAIIDKEGWLEPNALVIIEEYA  158 (189)
Q Consensus        91 ~~~~~~---~~~~~ii~~D~~~~~~~~~~~~fDiIf~DPPY~~~~~~~~l~~l~~~~~L~~~gliiiE~~~  158 (189)
T Consensus       114 lP~~~~~~~dpr~~~~----~~~~~~-~~~~fDvIIvDsl~~~~~~~~l~------~~L~~~Gi~v~Q~es  173 (262)
T PRK00536        114 FPHFHEVKNNKNFTHA----KQLLDL-DIKKYDLIICLQEPDIHKIDGLK------RMLKEDGVFISVAKH  173 (262)
T ss_pred             CHHHHHHHCCCCEEHH----HHHHHH-CCCCCCEEEECCCCCCCHHHHHH------HHHCCCCEEEECCCC
T ss_conf             8565654139961139----998761-54766889988999805499999------985899899983897