HHsearch alignment for GI: 254780405 and conserved domain: PRK04338
>PRK04338 N(2),N(2)-dimethylguanosine tRNA methyltransferase; Provisional.
Probab=98.95 E-value=5.7e-10 Score=80.00 Aligned_cols=164 Identities=24% Similarity=0.328 Sum_probs=103.2
Q ss_pred EEEEEEEECCEEEECCCC---------CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHH-HHCCCCCC
Q ss_conf 199864108867443788---------88677858999999987763336455896786110012221001-10168733
Q gi|254780405|r 4 IRIIGGKFQRRLLHTPQN---------RSIRPSDSRTKKALFDILTHVYPVFLDSTRMLNIFAGTGSVGFE-ALSRGCHY 73 (189)
Q Consensus 4 mrii~G~~kg~~l~~~~~---------~~~RPt~~~vrealFniL~~~~~~~~~~~~vlDlfaGsG~lgiE-alSrGA~~ 73 (189)
T Consensus 3 ~~i~EG~~---~i~vP~~~~~~~~~~pVFYNP~~~~nRDlsvl~~~~~~--~~~~~~ilDalsasGiR~iRy~~E~~~~~ 77 (376)
T PRK04338 3 MIVREGKV---KILVPDPSKGPSKWAPVFYNPAMELNRDISVLALKAFG--PKRRKSVLDALSASGIRGIRYALETGVEK 77 (376)
T ss_pred EEEEECEE---EEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH--CCCCCEEEECCCCCCHHHHHHHHHCCCCE
T ss_conf 79981518---99836866678878862238513043429999999974--20697687406765499999987279987
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 01110001235667642001332210022344566542100344443101513431000288898887448888974999
Q gi|254780405|r 74 VLFVDNNSESIRLIRRNSELLGVEKNCNIFFRDVLRLGKIGNISPFQLVYLDPPYGQGLAQQALAIIDKEGWLEPNALVI 153 (189)
Q Consensus 74 v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~~D~~~~~~~~~~~~fDiIf~DPPY~~~~~~~~l~~l~~~~~L~~~glii 153 (189)
T Consensus 78 v~~NDi~~~a~~~i~~N~~~N~~~-~~~v~~~dAn~lm~~-~~~~fD~IDlDP-fGSp--~pflDsAi~~--v~~~GlL~ 150 (376)
T PRK04338 78 VILNDINPDAVELIKKNLELNGLE-NAEVFNEDANVLLHE-NERKFDVVDIDP-FGSP--APFLDSAIRA--LRRGGLLC 150 (376)
T ss_pred EEEECCCHHHHHHHHHHHHHHCCC-CEEEECCCHHHHHHH-CCCCCCEEEECC-CCCC--CHHHHHHHHH--HHCCCEEE
T ss_conf 999569999999999999982998-269813248999983-787587786789-9992--0879999998--40398899
Q ss_pred EECCCCCCCCCCCCCEEEEEEECCCEEE
Q ss_conf 9817788867578857999834185699
Q gi|254780405|r 154 IEEYAGTCISVGAAFHFLQERKYGDTKI 181 (189)
Q Consensus 154 iE~~~~~~~~~~~~~~~~~~k~yG~t~i 181 (189)
T Consensus 151 vTaT--D~a~L~G~~~~~~~r~Yga~~~ 176 (376)
T PRK04338 151 VTAT--DTAVLCGAYPKSCLRKYGAVPL 176 (376)
T ss_pred EEEC--CCCCCCCCCCHHHHHHHCCEEC
T ss_conf 9946--8610048880468787177632