HHsearch alignment for GI: 254780405 and conserved domain: PRK08317

Probab=98.98  E-value=5.3e-10  Score=80.20  Aligned_cols=121  Identities=22%  Similarity=0.209  Sum_probs=87.9

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHCC-C-CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
Q ss_conf             778589999999877633364558967861100122210011016-8-73301110001235667642001332210022
Q gi|254780405|r   25 RPSDSRTKKALFDILTHVYPVFLDSTRMLNIFAGTGSVGFEALSR-G-CHYVLFVDNNSESIRLIRRNSELLGVEKNCNI  102 (189)
Q Consensus        25 RPt~~~vrealFniL~~~~~~~~~~~~vlDlfaGsG~lgiEalSr-G-A~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~i  102 (189)
T Consensus         1 ~p~~~~~r~~~l~~L~l-----~pG~~vLDiGcG~G~~~~~la~~~g~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~   73 (241)
T PRK08317          1 LPDFRRYRARTFELLAV-----QPGERVLDVGCGPGNDLRELADRVGPEGRVVGIDRSEAMLALARERAAGLL--SNVEF   73 (241)
T ss_pred             CCHHHHHHHHHHHHCCC-----CCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCC--CCEEE
T ss_conf             92768999999973699-----997999996641749999999974999789999698899999999986228--96499


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCHHHH-HCCHHHHHHHHHHCCCCCCCEEEEEEC
Q ss_conf             344566542100344443101513431-000288898887448888974999981
Q gi|254780405|r  103 FFRDVLRLGKIGNISPFQLVYLDPPYG-QGLAQQALAIIDKEGWLEPNALVIIEE  156 (189)
Q Consensus       103 i~~D~~~~~~~~~~~~fDiIf~DPPY~-~~~~~~~l~~l~~~~~L~~~gliiiE~  156 (189)
T Consensus        74 ~~~d~~~l-p-~~d~sfD~v~~~~~l~h~~d~~~~l~e~~--RvLkPGG~~vi~d  124 (241)
T PRK08317         74 VRGDADGL-P-FPDESFDAVRSDRVLQHLEDPRRALAEMA--RVLRPGGRAVVLD  124 (241)
T ss_pred             EECCHHHC-C-CCCCCCCEEEHHHHHHHCCCHHHHHHHHH--HHCCCCCEEEEEE
T ss_conf             95546435-8-98887045622115762258999999999--9818883899996