HHsearch alignment for GI: 254780405 and conserved domain: PRK11088

Probab=96.05  E-value=0.0042  Score=39.26  Aligned_cols=90  Identities=17%  Similarity=0.207  Sum_probs=54.2

Q ss_pred             CCCEEEECCCCCCCCHH---HHHCC-CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             89678611001222100---11016-873301110001235667642001332210022344566542100344443101
Q gi|254780405|r   48 DSTRMLNIFAGTGSVGF---EALSR-GCHYVLFVDNNSESIRLIRRNSELLGVEKNCNIFFRDVLRLGKIGNISPFQLVY  123 (189)
Q Consensus        48 ~~~~vlDlfaGsG~lgi---EalSr-GA~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~~D~~~~~~~~~~~~fDiIf  123 (189)
T Consensus        85 ~~~~ilD~GCGEGyYl~~l~~~l~~~~~~~~~G~DiSK~ai~~Aak~------~~~~~~~Va~~~~-lP~-~d~s~D~vl  156 (272)
T PRK11088         85 KATAILDIGCGEGYYTHALADALPEVTTCQLFGLDISKVAIKYAAKR------YPQVTFCVASSHR-LPF-ADQSLDAII  156 (272)
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCC------CCCCEEEEEECCC-CCC-CCCCCEEEE
T ss_conf             78648881587778999999974115787379981179999999626------8885499961001-888-766540899


Q ss_pred             C-CHHHHHCCHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf             5-134310002888988874488889749999
Q gi|254780405|r  124 L-DPPYGQGLAQQALAIIDKEGWLEPNALVII  154 (189)
Q Consensus       124 ~-DPPY~~~~~~~~l~~l~~~~~L~~~gliii  154 (189)
T Consensus       157 ~vFsP~---~~~Ef------~RvLkp~G~li~  179 (272)
T PRK11088        157 RIYAPC---KAEEL------ARVVKPGGIVIT  179 (272)
T ss_pred             EEECCC---CHHHH------HHEECCCCEEEE
T ss_conf             984378---85886------124637978999