HHsearch alignment for GI: 254780405 and conserved domain: PRK11188

Probab=96.10  E-value=0.0069  Score=37.98  Aligned_cols=99  Identities=18%  Similarity=0.155  Sum_probs=60.1

Q ss_pred             CCCCCCCCEEEECCCCCCCCHHHHHCC-C-CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH------HHHHC
Q ss_conf             364558967861100122210011016-8-733011100012356676420013322100223445665------42100
Q gi|254780405|r   43 YPVFLDSTRMLNIFAGTGSVGFEALSR-G-CHYVLFVDNNSESIRLIRRNSELLGVEKNCNIFFRDVLR------LGKIG  114 (189)
Q Consensus        43 ~~~~~~~~~vlDlfaGsG~lgiEalSr-G-A~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~~D~~~------~~~~~  114 (189)
T Consensus        46 ~~l~~~~~~VlDLGaAPG~WsQva~~~~~~~g~VigVDl~~~~p-----------i-~gv~~i~gDi~~~~~~~~i~~~~  113 (209)
T PRK11188         46 DKLFKPGMTVVDLGAAPGGWSQYAVTQIGDKGRVIACDILPMDP-----------I-VGVDFLQGDFRDELVLKALLERV  113 (209)
T ss_pred             HCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCC-----------C-CCCEEECCCCCCHHHHHHHHHHH
T ss_conf             56457899899806899757899999739997399986530453-----------7-89676403445889999999985


Q ss_pred             CCCCCCCCCCCH-HHHH-----------CCHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             344443101513-4310-----------0028889888744888897499998
Q gi|254780405|r  115 NISPFQLVYLDP-PYGQ-----------GLAQQALAIIDKEGWLEPNALVIIE  155 (189)
Q Consensus       115 ~~~~fDiIf~DP-PY~~-----------~~~~~~l~~l~~~~~L~~~gliiiE  155 (189)
T Consensus       114 ~~~~~DvVlSDmAPn~tG~~~~D~~~s~~L~~~al~~a--~~~Lk~gG~fv~K  164 (209)
T PRK11188        114 GDSKVDVVMSDMAPNMSGTPAVDIPRAMYLVELALDMC--RQVLAPGGSFVVK  164 (209)
T ss_pred             CCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCEEEEE
T ss_conf             89873089666665667870335999999999999999--9862679889999