HHsearch alignment for GI: 254780405 and conserved domain: PRK12335

Probab=98.31  E-value=1.8e-06  Score=59.30  Aligned_cols=112  Identities=17%  Similarity=0.233  Sum_probs=80.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf             88677858999999987763336455896786110012221001101687330111000123566764200133221002
Q gi|254780405|r   22 RSIRPSDSRTKKALFDILTHVYPVFLDSTRMLNIFAGTGSVGFEALSRGCHYVLFVDNNSESIRLIRRNSELLGVEKNCN  101 (189)
Q Consensus        22 ~~~RPt~~~vrealFniL~~~~~~~~~~~~vlDlfaGsG~lgiEalSrGA~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~  101 (189)
T Consensus       105 Y~lt~tHSev~~a~----~-----~i~pgkaLDLGCG~GRNsLyLa~~Gf-dVTA~D~N~~sl~~L~~ia~~E~L--~i~  172 (289)
T PRK12335        105 YNLTPTHSEVLEAA----K-----TVKPGKALDLGCGQGRNSLYLALLGF-DVTAVDINQASLENLQQIAEKENL--NIR  172 (289)
T ss_pred             CCCCCCCHHHHHHH----H-----HCCCCCEEEECCCCCCCHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHCCC--CCC
T ss_conf             38998619999987----5-----26887466604788822788975798-425886899999999999997198--877


Q ss_pred             HHHHHHHHHHHHCCCCCCCCC-------CCCHHHHHCCHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf             234456654210034444310-------15134310002888988874488889749999
Q gi|254780405|r  102 IFFRDVLRLGKIGNISPFQLV-------YLDPPYGQGLAQQALAIIDKEGWLEPNALVII  154 (189)
Q Consensus       102 ii~~D~~~~~~~~~~~~fDiI-------f~DPPY~~~~~~~~l~~l~~~~~L~~~gliii  154 (189)
T Consensus       173 ~~~yDIN~a---~l~~~YDfI~STVV~mFL~~----~~ip~iI~nMQ~~--T~~gGyNlI  223 (289)
T PRK12335        173 AGSYDINSA---SLQEEYDFILSTVVLMFLNP----ERIPDIIKNMQEH--TNPGGYNLI  223 (289)
T ss_pred             CEEECCCCC---CCCCCCCEEEEEEEEEEECH----HHHHHHHHHHHHH--CCCCCEEEE
T ss_conf             257516666---66777678999678864287----7869999999984--479986899