HHsearch alignment for GI: 254780405 and conserved domain: PTZ00146
>PTZ00146 fibrillarin; Provisional.
Probab=93.00 E-value=0.14 Score=30.28 Aligned_cols=122 Identities=16% Similarity=0.205 Sum_probs=74.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHCC--CC-CCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf 778589999999877633364558967861100122210011016--87-330111000123566764200133221002
Q gi|254780405|r 25 RPSDSRTKKALFDILTHVYPVFLDSTRMLNIFAGTGSVGFEALSR--GC-HYVLFVDNNSESIRLIRRNSELLGVEKNCN 101 (189)
Q Consensus 25 RPt~~~vrealFniL~~~~~~~~~~~~vlDlfaGsG~lgiEalSr--GA-~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ 101 (189)
T Consensus 114 nPfRSKLAAaIl~Gl~~i-~-Ik~GskVLYLGAasGT-TVSHVSDIVG~~G~VYAVEfSpr~~RdLl~lA~---~R~NIv 187 (296)
T PTZ00146 114 NPFRSKLAAAIYGGVASI-P-IKPGSKVLYLGAASGT-TVSHVSDLVGPEGVVYAVEFSHRSGRDLVEMAK---RRTNIV 187 (296)
T ss_pred CCCCHHHHHHHHCCCCCC-C-CCCCCEEEEECCCCCC-CHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHH---CCCCCE
T ss_conf 755018899997696444-4-3799989985146798-655666501788619999706466889999972---279833
Q ss_pred HHHHHHHHHHHH-CCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf 234456654210-034444310151343100028889888744888897499998
Q gi|254780405|r 102 IFFRDVLRLGKI-GNISPFQLVYLDPPYGQGLAQQALAIIDKEGWLEPNALVIIE 155 (189)
Q Consensus 102 ii~~D~~~~~~~-~~~~~fDiIf~DPPY~~~~~~~~l~~l~~~~~L~~~gliiiE 155 (189)
T Consensus 188 PIleDAr~P~kYr~lV~~VDvIf~DVA---QpdQarI~~~Na~~FLK~gG~~~i~ 239 (296)
T PTZ00146 188 PIIEDARYPQKYRMLVPMVDCIFADVA---QPDQARIVALNAQHFLKNGGHFVIS 239 (296)
T ss_pred EEECCCCCHHHHHHHCCCCCEEEECCC---CHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 577778974675542455558996178---7658999999999853169889999