HHsearch alignment for GI: 254780405 and conserved domain: TIGR00308
>TIGR00308 TRM1 N2,N2-dimethylguanosine tRNA methyltransferase; InterPro: IPR002905 This enzyme 2.1.1.32 from EC uses S-adenosyl-L-methionine to methylate tRNA: S-AdoMet + tRNA = S-adenosyl-L-homocysteine + tRNA containing N2-methylguanine The TRM1 gene of Saccharomyces cerevisiae is necessary for the N2,N2-dimethylguanosine modification of both mitochondrial and cytoplasmic tRNAs . The enzyme is found in both eukaryotes and archaea .; GO: 0003723 RNA binding, 0004809 tRNA (guanine-N2-)-methyltransferase activity, 0008033 tRNA processing.
Probab=98.30 E-value=1.5e-07 Score=65.73 Aligned_cols=98 Identities=19% Similarity=0.357 Sum_probs=77.0
Q ss_pred CEEEECCCCCCCCHHHHH----CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC---CCCCCCCC
Q ss_conf 678611001222100110----16873301110001235667642001332210022344566542100---34444310
Q gi|254780405|r 50 TRMLNIFAGTGSVGFEAL----SRGCHYVLFVDNNSESIRLIRRNSELLGVEKNCNIFFRDVLRLGKIG---NISPFQLV 122 (189)
Q Consensus 50 ~~vlDlfaGsG~lgiEal----SrGA~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~~D~~~~~~~~---~~~~fDiI 122 (189)
T Consensus 96 i~~~dALSasGiRaiRya~E~~fngv~~v~~ND~~P~Ave~I~~N~~~N~v~-N~~v~n~Da~~~L~~~nkat~~~F~vi 174 (462)
T TIGR00308 96 IEIADALSASGIRAIRYALEVEFNGVKKVFANDINPKAVESIKNNVKLNSVE-NIEVINEDAAAVLRKRNKATFRKFEVI 174 (462)
T ss_pred HHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCC-CCCCCCCHHHHHHHHHCHHHCCCCCEE
T ss_conf 8999875104088999987446576106775347737889988412324422-765455037999875121123676437
Q ss_pred CCCHHHHH--CCHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 15134310--002888988874488889749999
Q gi|254780405|r 123 YLDPPYGQ--GLAQQALAIIDKEGWLEPNALVII 154 (189)
Q Consensus 123 f~DPPY~~--~~~~~~l~~l~~~~~L~~~gliii 154 (189)
T Consensus 175 DiDP-FGspAPFvd~A~~~~~-----~~NglL~v 202 (462)
T TIGR00308 175 DIDP-FGSPAPFVDSAIRASA-----KRNGLLLV 202 (462)
T ss_pred EECC-CCCCCCHHHHHHHHHH-----HCCCCEEE
T ss_conf 6478-7797415899999997-----46860440