HHsearch alignment for GI: 254780405 and conserved domain: TIGR00417
>TIGR00417 speE spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (), spermine synthase () and putrescine N-methyltransferase () . The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain . The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) . ; GO: 0003824 catalytic activity.
Probab=97.67 E-value=5.1e-05 Score=50.62 Aligned_cols=108 Identities=17% Similarity=0.248 Sum_probs=81.9
Q ss_pred CCCEEEECCCCCCCCHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHCCCC-CC---CCHHHHHHHHHHHHHHC----CCCC
Q ss_conf 89678611001222100110168-7330111000123566764200133-22---10022344566542100----3444
Q gi|254780405|r 48 DSTRMLNIFAGTGSVGFEALSRG-CHYVLFVDNNSESIRLIRRNSELLG-VE---KNCNIFFRDVLRLGKIG----NISP 118 (189)
Q Consensus 48 ~~~~vlDlfaGsG~lgiEalSrG-A~~v~~vE~~~~a~~~lk~N~~~~~-~~---~~~~ii~~D~~~~~~~~----~~~~ 118 (189)
T Consensus 75 NPk~VLvIGGGDGG~lREV~KH~sVE~~~lVdID~~VI~~srkyLP~~~~g~~dderv~~~i~DG~~fl~~~Gasdv~~~ 154 (284)
T TIGR00417 75 NPKKVLVIGGGDGGVLREVVKHKSVEKATLVDIDEKVIELSRKYLPKLAAGSFDDERVDLAIDDGFKFLRDTGASDVEKK 154 (284)
T ss_pred CCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCHHHHHHHHHHCHHHHCCCCCCCEEEEEECCCHHHHHHCCCCCCCCC
T ss_conf 88547899638884687887559816799997274789998882612105665888035898251798976152222121
Q ss_pred CCCCCCCHH--H--HHCCHHH-HHHHHHHCCCCCCCEEEEEECC
Q ss_conf 431015134--3--1000288-8988874488889749999817
Q gi|254780405|r 119 FQLVYLDPP--Y--GQGLAQQ-ALAIIDKEGWLEPNALVIIEEY 157 (189)
Q Consensus 119 fDiIf~DPP--Y--~~~~~~~-~l~~l~~~~~L~~~gliiiE~~ 157 (189)
T Consensus 155 fDVIIvDstDPvGPa~~LF~~~Fy~~~~~--aL~~~Gv~v~Qss 196 (284)
T TIGR00417 155 FDVIIVDSTDPVGPAETLFTKEFYELLKK--ALNEDGVIVAQSS 196 (284)
T ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHHH--HCCCCCEEEEECC
T ss_conf 44799727789565541021799999998--5299988998027