HHsearch alignment for GI: 254780405 and conserved domain: TIGR03533
>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific. Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors.
Probab=99.80 E-value=1.4e-19 Score=137.03 Aligned_cols=143 Identities=17% Similarity=0.216 Sum_probs=107.2
Q ss_pred ECCEEEECCCCCC-CC-CCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHC-CCCCCHHHHHHHHHHHHHH
Q ss_conf 0886744378888-67-7858999999987763336455896786110012221001101-6873301110001235667
Q gi|254780405|r 11 FQRRLLHTPQNRS-IR-PSDSRTKKALFDILTHVYPVFLDSTRMLNIFAGTGSVGFEALS-RGCHYVLFVDNNSESIRLI 87 (189)
Q Consensus 11 ~kg~~l~~~~~~~-~R-Pt~~~vrealFniL~~~~~~~~~~~~vlDlfaGsG~lgiEalS-rGA~~v~~vE~~~~a~~~l 87 (189)
T Consensus 87 F~gl~f~V~~~VLIPR~~teeLv~~~l~~~~~~~-----~~~~iLDlGtGSG~Iai~la~~~p~~~v~a~DiS~~Al~~A 161 (284)
T TIGR03533 87 FAGLEFYVDERVLIPRSPIAELIEDGFAPWLEPE-----PVKRILDLCTGSGCIAIACAYAFPEAEVDAVDISPDALAVA 161 (284)
T ss_pred ECCCEEEECCCCEECCCCCHHHHHHHHHHHHCCC-----CCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHH
T ss_conf 7384788689954389971999999999984236-----77715552168079999999878998799998999999999
Q ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHC-----C-----HH------------HHHHHHHH--C
Q ss_conf 64200133221002234456654210034444310151343100-----0-----28------------88988874--4
Q gi|254780405|r 88 RRNSELLGVEKNCNIFFRDVLRLGKIGNISPFQLVYLDPPYGQG-----L-----AQ------------QALAIIDK--E 143 (189)
Q Consensus 88 k~N~~~~~~~~~~~ii~~D~~~~~~~~~~~~fDiIf~DPPY~~~-----~-----~~------------~~l~~l~~--~ 143 (189)
T Consensus 162 ~~N~~~~~l~~rv~~~~~D~~~~~---~~~~fDlIVSNPPYI~~~e~~~l~~ev~~EP~~AL~gG~dGL~~yr~Ii~~a~ 238 (284)
T TIGR03533 162 EINIERHGLEDRVTLIQSDLFAAL---PGRKYDLIVSNPPYVDAEDMADLPAEYHHEPELALASGEDGLDLVRRILAEAA 238 (284)
T ss_pred HHHHHHHCCCCCEEEEECCHHHHC---CCCCCCEEEECCCCCCHHHHHHCCHHHCCCCHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 999986085433688835143314---57777879977997884655449764115869987589558799999999889
Q ss_pred CCCCCCEEEEEECCCCCC
Q ss_conf 888897499998177888
Q gi|254780405|r 144 GWLEPNALVIIEEYAGTC 161 (189)
Q Consensus 144 ~~L~~~gliiiE~~~~~~ 161 (189)
T Consensus 239 ~~L~pgG~l~lEiG~~Q~ 256 (284)
T TIGR03533 239 DHLNENGVLVVEVGNSME 256 (284)
T ss_pred HHCCCCCEEEEEECCCHH
T ss_conf 842569789999797889