HHsearch alignment for GI: 254780405 and conserved domain: pfam01135

Probab=98.53  E-value=2.4e-08  Score=70.39  Aligned_cols=97  Identities=22%  Similarity=0.295  Sum_probs=72.1

Q ss_pred             CCCEEEECCCCCCCCHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             896786110012221001101687---33011100012356676420013322100223445665421003444431015
Q gi|254780405|r   48 DSTRMLNIFAGTGSVGFEALSRGC---HYVLFVDNNSESIRLIRRNSELLGVEKNCNIFFRDVLRLGKIGNISPFQLVYL  124 (189)
Q Consensus        48 ~~~~vlDlfaGsG~lgiEalSrGA---~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~~D~~~~~~~~~~~~fDiIf~  124 (189)
T Consensus        73 ~g~~VLeIGtGsGY~tA-lLa~l~~~~g~V~~iE~~~~l~~~A~~~l~~~~~~-nV~~~~gdg~~g~--~~~apfD~Iiv  148 (205)
T pfam01135        73 PGMRVLEIGSGSGYLTA-CFARMVGEVGRVVSIEHIPELVEIARRNLEKLGLE-NVIVVVGDGRQGW--PEFAPYDAIHV  148 (205)
T ss_pred             CCCEEEEECCCCCHHHH-HHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCC-CEEEEECCCCCCC--CCCCCCCEEEE
T ss_conf             99989996699659999-99998387876999835899999999999984888-6589845645588--33398058999


Q ss_pred             CHHHHHCCHHHHHHHHHHCCCCCCCEEEEEE
Q ss_conf             1343100028889888744888897499998
Q gi|254780405|r  125 DPPYGQGLAQQALAIIDKEGWLEPNALVIIE  155 (189)
Q Consensus       125 DPPY~~~~~~~~l~~l~~~~~L~~~gliiiE  155 (189)
T Consensus       149 ~a-----a~~~iP~~l~~--qL~~gGrLv~p  172 (205)
T pfam01135       149 GA-----AAPEIPEALID--QLKEGGRLVIP  172 (205)
T ss_pred             EE-----ECCCCCHHHHH--HCCCCCEEEEE
T ss_conf             75-----06768899999--62879789999