HHsearch alignment for GI: 254780405 and conserved domain: pfam01555

>pfam01555 N6_N4_Mtase DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.
Probab=97.30  E-value=8.3e-05  Score=49.38  Aligned_cols=42  Identities=21%  Similarity=0.363  Sum_probs=37.0

Q ss_pred             CCCCEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             5896786110012221001101687330111000123566764
Q gi|254780405|r   47 LDSTRMLNIFAGTGSVGFEALSRGCHYVLFVDNNSESIRLIRR   89 (189)
Q Consensus        47 ~~~~~vlDlfaGsG~lgiEalSrGA~~v~~vE~~~~a~~~lk~   89 (189)
T Consensus       180 ~~gd~VlDpF~GSGTT~~Aa~~l~-R~~iG~E~~~~y~~~a~~  221 (221)
T pfam01555       180 NPGDIVLDPFAGSGTTGAAAKELG-RNFIGIEIEEEYVEIAKE  221 (221)
T ss_pred             CCCCEEEECCCCCHHHHHHHHHHC-CEEEEEECCHHHHHHHHC
T ss_conf             997999989998279999999829-959999589999999619