HHsearch alignment for GI: 254780405 and conserved domain: pfam08242

Probab=98.33  E-value=2.1e-07  Score=64.75  Aligned_cols=96  Identities=19%  Similarity=0.120  Sum_probs=62.5

Q ss_pred             EECCCCCCCCHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH-H
Q ss_conf             611001222100110168-73301110001235667642001332210022344566542100344443101513431-0
Q gi|254780405|r   53 LNIFAGTGSVGFEALSRG-CHYVLFVDNNSESIRLIRRNSELLGVEKNCNIFFRDVLRLGKIGNISPFQLVYLDPPYG-Q  130 (189)
Q Consensus        53 lDlfaGsG~lgiEalSrG-A~~v~~vE~~~~a~~~lk~N~~~~~~~~~~~ii~~D~~~~~~~~~~~~fDiIf~DPPY~-~  130 (189)
T Consensus         1 LDvGcG~G~~~~~l~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~fD~I~~~~vl~~~   78 (98)
T pfam08242         1 LDIGCGTGTLLRALLEALPGLEYTGVDISPAALEAAAERLAALGLL-DAVRVRLDVLDAID-LDPGSFDVVVASNVLHHL   78 (98)
T ss_pred             CCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCC-CCHHHEEECCCHHH-CCCCCCCEEEECCCHHHC
T ss_conf             9886337999999998789988999859889999999999871345-31110000000222-035898899610417725


Q ss_pred             CCHHHHHHHHHHCCCCCCCEEE
Q ss_conf             0028889888744888897499
Q gi|254780405|r  131 GLAQQALAIIDKEGWLEPNALV  152 (189)
Q Consensus       131 ~~~~~~l~~l~~~~~L~~~gli  152 (189)
T Consensus        79 ~~~~~~l~~~~--r~LkpgG~l   98 (98)
T pfam08242        79 ADPRAVLRNLR--RLLKPGGVL   98 (98)
T ss_pred             CCHHHHHHHHH--HHCCCCCCC
T ss_conf             89999999999--974999899