HHsearch alignment of GI: 254780406 and MMDB domain: 2vqe_D_100-193

>2vqe_D (D:100-193) 30S ribosomal protein S4; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus}

Probab=98.83  E-value=7.8e-09  Score=75.04  Aligned_cols=53  Identities=28%  Similarity=0.449  Sum_probs=49.8

Q ss_pred             HHHHHHHHCCCC-CHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEECCEEC
Q ss_conf             478899988687-78999999986986999999240687807999799999892
Q gi|254780406|r   15 RVSKVIARAGIA-SRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDGVPL   67 (354)
Q Consensus        15 RL~K~la~~g~~-SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vdg~~i   67 (354)
                      |||++|.++|+| ||.+|.++|..|.|.|||++|+.|++.|.++|.|++.+...
T Consensus         1 RLD~~l~r~~~~~Tr~~ArqlI~hg~V~VNg~~v~~ps~~v~~gD~I~i~~~~~   54 (94)
T 2vqe_D            1 RLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSR   54 (94)
T ss_dssp             BHHHHHHHTTSSSSHHHHHHHHHTTCEEETTEECCCTTCBCCTTCEEEECGGGT
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHCCCEECCCEEEEECCEEECCCCCHHHHHHHH
T ss_conf             999999853520028988899870684508879975367852886001211010