HHsearch alignment of GI: 254780406 and MMDB domain: 3dh3_A_1-63
>3dh3_A (A:1-63) Ribosomal large subunit pseudouridine synthase F; protein-RNA complex, S4 domain, alpha/beta protein, isomerase, RNA-binding, rRNA processing; HET: FHU; 3.00A {Escherichia coli}
Probab=99.43 E-value=3.8e-13 Score=102.23 Aligned_cols=61 Identities=33% Similarity=0.423 Sum_probs=56.7
Q ss_pred CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEECCEECCCCC
Q ss_conf 67734478899988687789999999869869999992406878079997999998922556
Q gi|254780406|r 10 NFTPQRVSKVIARAGIASRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDGVPLRKAE 71 (354)
Q Consensus 10 ~~~~~RL~K~la~~g~~SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vdg~~i~~~~ 71 (354)
...++|||||||+.|+|||++|++||++|+|+|||++|+ ++++|.++|.|+|+++++.+.+
T Consensus 3 ~~~~~RLDk~La~~~~~SR~~~~~li~~G~V~Vng~~vk-~~~~v~~~d~I~v~~~~~~~~e 63 (63)
T 3dh3_A 3 PDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRAT-IGDQVKPGDVVKVNGQLIEPRE 63 (63)
T ss_dssp -CCCEEHHHHHHTTTSSCHHHHHHHHHTTCEEETTEECC-TTCEECTTCCEEETTEEECCCC
T ss_pred CCCCCCHHHHHHHCCCCCHHHHHHHHHCCCEEECCEECC-CCCCCCCCCEEEECCEEEEEEE
T ss_conf 988704999998778851999999998793898999947-8889699998999999921120