HHsearch results for GI: 254780406 and protein with PDBid: 2i82_A
>2i82_A Ribosomal large subunit pseudouridine synthase A; lyase/RNA complex; HET: FOU; 2.05A {Escherichia coli}
Probab=99.71 E-value=4.5e-18 Score=132.30 Aligned_cols=145 Identities=14% Similarity=0.165 Sum_probs=101.4
Q ss_pred CCCCEEEEECCCCCEEEECCCCCCCCCCCCEE-ECCCCCCEECCCCCCCCCCCEEEECCCCCCCCCC--CCCCCCCEEEE
Q ss_conf 55643896027875156314433336442101-1023432002665543323202223676410001--23445740477
Q gi|254780406|r 69 KAERTRLWLYHKPIGLVTTHSDPDGRSTVFDN-LPSIFSRVISVGRLDINTEGLLLLTNDGGLARVL--ELPSTQWLRVY 145 (354)
Q Consensus 69 ~~~~~~~~~~~KP~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~vgRLD~~t~GLlllTndg~l~~~l--~~p~~~~~k~Y 145 (354)
.+|+..++++|||.|+.|+............. .......+.+|+|||++||||+|++.+.+.+..| +.....+.|.|
T Consensus 15 lyed~~~lvvnKP~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~vhRLD~~TSGlvl~Ak~~~~~~~l~~~~~~~~v~K~Y 94 (217)
T 2i82_A 15 LYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQY 94 (217)
T ss_dssp EEECSSEEEEEECTTSBSSCCSSGGGCCBHHHHHHHHCTTCEESSCCCTTCEEEEEEESSHHHHHHHHHHHHTTCSEEEE
T ss_pred EEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHCCEEEEEE
T ss_conf 99789999999999982569988776048999875037864315457875214799950205578999998659351599
Q ss_pred EEEECCCCCHHHHHHHH-----------HH-HHCCCEEEECCCEEEEECCCCEEEEEEEEEECCHHHHHHHHHHCCCEEE
Q ss_conf 52112455646788874-----------00-0008767503430364026880799999951842899999998398686
Q gi|254780406|r 146 RVRFHGQVDQDKLNLLK-----------KG-IVIQGICYGDMQVTLDTQKGSNAWVTVGLREGKNREIKKVFEFFNWKVN 213 (354)
Q Consensus 146 ~v~v~~~~~~~~~~~~~-----------~g-~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~eGr~~qIrr~~~~~g~~V~ 213 (354)
++.|.|.+......... .. ....+.................+++++.+.+||.||||.+|+++|++++
T Consensus 95 ~a~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~TGR~HQIRvHla~ig~PIv 174 (217)
T 2i82_A 95 VARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPIL 174 (217)
T ss_dssp EEEEESCCSSSEEEEECCEEECGGGTTCEEECTTTCBCCEEEEEEEEEETTTEEEEEEEESSCCTTHHHHHHHHTTCCBT
T ss_pred EEEECCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCCC
T ss_conf 78751433566436975452014567413565037863315899987511331477999898984799999997698261