HHsearch results for GI: 254780406 and protein with PDBid: 2k6p_A
>2k6p_A Uncharacterized protein HP_1423; alpha-L motif, RNA-binding, unknown function; NMR {Helicobacter pylori}
Probab=98.82 E-value=1.8e-10 Score=84.35 Aligned_cols=75 Identities=24% Similarity=0.302 Sum_probs=60.3
Q ss_pred HHHHHHHHHCCCC-CHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEECC-----------EEC---CCCCCEEEEEC
Q ss_conf 4478899988687-78999999986986999999240687807999799999-----------892---25564389602
Q gi|254780406|r 14 QRVSKVIARAGIA-SRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDG-----------VPL---RKAERTRLWLY 78 (354)
Q Consensus 14 ~RL~K~la~~g~~-SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vdg-----------~~i---~~~~~~~~~~~ 78 (354)
+||||||+.++++ ||..|+++|.+|.|+|||++++ ++++|..+|.|+|.- .++ .++++..+++.
T Consensus 1 mRlDk~L~~~~~~~SRs~~~~lI~~G~V~vng~~~k-~s~~V~~Gd~i~i~~~~~~~~~~v~~i~~~~~i~~ED~~l~ii 79 (92)
T 2k6p_A 1 MRIDKFLQSVGLVKRRVLATDMCNVGAVWLNGSCAK-ASKEVKAGDTISLHYLKGIEEYTILQIPALKNVPRKDTHLYIA 79 (92)
T ss_dssp CBHHHHSTTTTSCCCCCSSCCHHHHTCCEETTEECC-TTCBCCTTCEEEECCSSCCEEEEECCCCCCSCCCSSSTTSSEE
T ss_pred CCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEEE-ECCEECCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHCCCEE
T ss_conf 977899987377379999999998892897999975-2368279999999838970799999788657985255182698
Q ss_pred CCCCEEEECCC
Q ss_conf 78751563144
Q gi|254780406|r 79 HKPIGLVTTHS 89 (354)
Q Consensus 79 ~KP~g~~~~~~ 89 (354)
|||+|+-.+..
T Consensus 80 ~K~~~le~~~~ 90 (92)
T 2k6p_A 80 PKTKELEHHHH 90 (92)
T ss_dssp ECCCC------
T ss_pred CCHHCCCCCCC
T ss_conf 06004634445