HHsearch results for GI: 254780406 and protein with PDBid: 3ofo_D
>3ofo_D 30S ribosomal protein S4; protein biosynthesis, ribosomes, RNA, tRNA, transfer, eryThr ketolide, macrolide, antibiotic, EXIT, peptidyl; 3.10A {Escherichia coli} PDB: 1p6g_D 1p87_D 2aw7_D 2avy_D 2i2u_D 2i2p_D* 2qan_D* 2qb9_D* 2qbb_D* 2qbd_D 2qbf_D 2qbh_D* 2qbj_D* 2qou_D* 2qow_D* 2qoy_D* 2qp0_D* 2vho_D 2vhp_D 2wwl_D* ...
Probab=98.09 E-value=2.1e-06 Score=58.74 Aligned_cols=53 Identities=23% Similarity=0.449 Sum_probs=49.4
Q ss_pred HHHHHHHHHCCCC-CHHHHHHHHHCCCEEECCEECCCCCEEECCCCEEEECCEE
Q ss_conf 4478899988687-7899999998698699999924068780799979999989
Q gi|254780406|r 14 QRVSKVIARAGIA-SRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDGVP 66 (354)
Q Consensus 14 ~RL~K~la~~g~~-SRr~a~~lI~~G~V~Vng~~v~~~~~~v~~~d~v~vdg~~ 66 (354)
.|||-++-++|++ |+..|.+||..|.|.|||+.|+.|++.|.++|.|.|..+.
T Consensus 95 ~RLDnvvyR~gfa~t~~~ARQlV~Hghi~VNgk~v~ips~~~k~gd~i~v~eks 148 (205)
T 3ofo_D 95 GRLDNVVYRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKA 148 (205)
T ss_dssp HBHHHHHHTTTSCSSHHHHHHHHHTTCEESSSSBCCSTTCBCCTTCEEEECSSS
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHCCEEECCEEECCCCCCCCCCCEEEHHHHH
T ss_conf 877789860662047999998886088650997863787253699897531335