Probab=99.73 E-value=3.8e-19 Score=137.52 Aligned_cols=152 Identities=17% Similarity=0.135 Sum_probs=109.0 Q ss_pred CCCCEEEEECCCCCEEEECCCCCCCCCCCCEEECCC------CCCEECCCCCCCCCCCEEEECCCCCCCCCCCC--CCCC Q ss_conf 556438960278751563144333364421011023------43200266554332320222367641000123--4457 Q gi|254780406|r 69 KAERTRLWLYHKPIGLVTTHSDPDGRSTVFDNLPSI------FSRVISVGRLDINTEGLLLLTNDGGLARVLEL--PSTQ 140 (354) Q Consensus 69 ~~~~~~~~~~~KP~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~vgRLD~~t~GLlllTndg~l~~~l~~--p~~~ 140 (354) .+++..++++|||.|+.|+........++.+.+... ...+.+|+|||++|||||||+.+...+..|.. .... T Consensus 11 lyeD~~~ivvnKP~gl~~hp~~~~~~~t~~~~l~~~~~~~~~~~~~~~vHRLDr~TSGlll~Ak~~~a~~~l~~~f~~~~ 90 (250) T d1v9fa_ 11 VYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRRE 90 (250) T ss_dssp EEECSSEEEEEECSSCCSSCBTTBSSSSHHHHHHHHCGGGGGSGGGGBCCCCCTTCEEEEEEESSHHHHHHHHHHHHTTC T ss_pred EEECCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHCCCE T ss_conf 99789999999999987807999998459999999736504887425775148887651788515278886323304545 Q ss_pred CEEEEEEEECCCCCHHHHHHHH---------HHHHCCCEEEECCCEEEEECCCCEEEEEEEEEECCHHHHHHHHHHCCCE Q ss_conf 4047752112455646788874---------0000087675034303640268807999999518428999999983986 Q gi|254780406|r 141 WLRVYRVRFHGQVDQDKLNLLK---------KGIVIQGICYGDMQVTLDTQKGSNAWVTVGLREGKNREIKKVFEFFNWK 211 (354) Q Consensus 141 ~~k~Y~v~v~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~eGr~~qIrr~~~~~g~~ 211 (354) |.|+|++.+.+.+..+.....- .-....++......+.+.......+++++.+.+||.||||.+|+++|++ T Consensus 91 v~K~Y~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~a~T~~~~l~~~~~~slv~~~~~TGR~HQIRvHla~lG~P 170 (250) T d1v9fa_ 91 ITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHP 170 (250) T ss_dssp SEEEEEEEEESCCCCCEEEECCEEECSSCTTCEEECTTSBCCEEEEEEEEECSSEEEEEEEESCCCTTHHHHHHHHTTCC T ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCC T ss_conf 76774432113546456623553357766630687789834441011344056742688786366327999999985983 Q ss_pred EEEEEEEEECC Q ss_conf 86889758705 Q gi|254780406|r 212 VNRLIRISYGP 222 (354) Q Consensus 212 V~~L~Rv~~G~ 222 (354) |+. -..||. T Consensus 171 IlG--D~~YG~ 179 (250) T d1v9fa_ 171 LVG--DPVYGG 179 (250) T ss_dssp BTT--CTTTTC T ss_pred CCE--ECCCCC T ss_conf 001--115762
class: Alpha and beta proteins (a+b)
fold: Pseudouridine synthase
superfamily: Pseudouridine synthase
family: Pseudouridine synthase RsuA/RluD
domain: Ribosomal large subunit pseudouridine synthase D, RluD
species: Escherichia coli [TaxId: 562]