Probab=98.09 E-value=1.5e-05 Score=51.94 Aligned_cols=146 Identities=16% Similarity=0.090 Sum_probs=88.7
Q ss_pred EEEEECCCCCEEEECCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEECCC
Q ss_conf 38960278751563144333364421011023432002665543323202223676410001234457404775211245
Q gi|254780406|r 73 TRLWLYHKPIGLVTTHSDPDGRSTVFDNLPSIFSRVISVGRLDINTEGLLLLTNDGGLARVLELPSTQWLRVYRVRFHGQ 152 (354)
Q Consensus 73 ~~~~~~~KP~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vgRLD~~t~GLlllTndg~l~~~l~~p~~~~~k~Y~v~v~~~ 152 (354)
.-++++|||.|+.++..=..-+. . -...++...|.||-..+|||++.-.. +.++..--....|+|.+++.-.
T Consensus 29 ~G~l~idKP~G~TS~~vv~~ikk----~--l~~kKvGH~GTLDP~AtGvL~v~iG~--aTKl~~~~~~~~K~Y~~~~~~g 100 (230)
T d2apoa2 29 YGVVVVDKPRGPTSHEVSTWVKK----I--LNLDKAGHGGTLDPKVTGVLPVALER--ATKTIPMWHIPPKEYVCLMHLH 100 (230)
T ss_dssp TEEEEEEECSSSCHHHHHHHHHH----H--TTCSCEEESSCCCTTCEEEEEEEEGG--GGGGGGGTTSSCEEEEEEEEES
T ss_pred CCEEEEECCCCCCHHHHHHHHHH----H--CCCCCCCCCCCCCCCCEEEEEEEECH--HHHHHHHHHCCCCEEEEEEEEE
T ss_conf 82899978998988999999999----7--18788776654672012466665338--8899999841684599999961
Q ss_pred C--CHHHHHHHHHHHHCCCEEEEC--------------CCEEEEECCCCEEEEEEEEEECCHHHHHHHHHHC------CC
Q ss_conf 5--646788874000008767503--------------4303640268807999999518428999999983------98
Q gi|254780406|r 153 V--DQDKLNLLKKGIVIQGICYGD--------------MQVTLDTQKGSNAWVTVGLREGKNREIKKVFEFF------NW 210 (354)
Q Consensus 153 ~--~~~~~~~~~~g~~~~~~~~~~--------------~~~~~~~~~~~~~~~~v~l~eGr~~qIrr~~~~~------g~ 210 (354)
. +.+.+......+.-.-....| ..+.+..-+.....++|.-..|-| ||-+...+ +-
T Consensus 101 ~~t~~~di~~~l~~f~G~i~Q~PP~ySAiK~~~r~~~i~~l~l~~~~~~~~~~~V~CSkGTY--IRSLa~DlG~~Lg~~a 178 (230)
T d2apoa2 101 RDASEEDILRVFKEFTGRIYQRPPLKAAVKRRLRIRKIHELELLDKDGKDVLFRVKCQSGTY--IRKLCEDIGEALGTSA 178 (230)
T ss_dssp SCCCHHHHHHHHHHHSEEEECC-----------CEEEEEEEEEEEEETTEEEEEEEECTTCC--HHHHHHHHHHHTTSCE
T ss_pred CCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCEEEEEEEECCCCC--HHHHHHHHHHHCCCEE
T ss_conf 34307679888985568621169963210124420356885412566775789999779741--9999999999819979
Q ss_pred EEEEEEEEEECCEECCCC
Q ss_conf 686889758705451875
Q gi|254780406|r 211 KVNRLIRISYGPFQLGTL 228 (354)
Q Consensus 211 ~V~~L~Rv~~G~~~l~~L 228 (354)
.+..|.|+++|+|.+++.
T Consensus 179 ~l~~LrRt~~G~f~l~~a 196 (230)
T d2apoa2 179 HMQELRRTKSGCFEEKDA 196 (230)
T ss_dssp EEEEEEEEEETTEEGGGC
T ss_pred EEEECCCCCCCCCCHHHC
T ss_conf 986782775398687985
class: Alpha and beta proteins (a+b)
fold: Pseudouridine synthase
superfamily: Pseudouridine synthase
family: Pseudouridine synthase II TruB
domain: Pseudouridine synthase II TruB
species: Archaeon Methanococcus jannaschii [TaxId: 2190]