BLAST/PSIBLAST alignment of GI: 254780406 and GI: 116250666 at iteration 1
>gi|116250666|ref|YP_766504.1| ribosomal large subunit pseudouridine synthase B [Rhizobium leguminosarum bv. viciae 3841] Length = 701
>gi|115255314|emb|CAK06389.1| putative ribosomal large subunit pseudouridine synthase B [Rhizobium leguminosarum bv. viciae 3841] Length = 701
Score = 356 bits (914), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 166/250 (66%), Positives = 197/250 (78%)
Query: 14 QRVSKVIARAGIASRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDGVPLRKAERT 73
+R+SKV+ARAG+ASRR++ERMI + RV +NG +LE VNV D IEVDGVP+R ERT
Sbjct: 52 ERISKVMARAGVASRRDIERMIMEGRVTLNGRVLETPVVNVTLADRIEVDGVPIRGIERT 111
Query: 74 RLWLYHKPIGLVTTHSDPDGRSTVFDNLPSIFSRVISVGRLDINTEGLLLLTNDGGLARV 133
RLWLYHKP GLVTT++DP+GRSTVFDNLP RV+S+GRLDINTEGLLLLTNDGGLAR
Sbjct: 112 RLWLYHKPAGLVTTNADPEGRSTVFDNLPEELPRVMSIGRLDINTEGLLLLTNDGGLARA 171
Query: 134 LELPSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQGICYGDMQVTLDTQKGSNAWVTVGL 193
LELP+T WLR YRVR HG++DQD L+ LK GI + G+ YG ++ TLD +GSN W+T+GL
Sbjct: 172 LELPATGWLRRYRVRAHGEIDQDALDKLKDGIAVDGVLYGSIEATLDRTQGSNVWITMGL 231
Query: 194 REGKNREIKKVFEFFNWKVNRLIRISYGPFQLGTLLAGSTREVSKKILREQLGPHLLEEA 253
REGKNREIK V VNRLIRISYGPFQLG L G EV + LR+QLGP L+EEA
Sbjct: 232 REGKNREIKNVLGALGLDVNRLIRISYGPFQLGDLPEGHVVEVRGRTLRDQLGPRLIEEA 291
Query: 254 QVNLDAPIYS 263
+ N DAPIY+
Sbjct: 292 KANFDAPIYN 301