PSIBLAST alignment of GI: 254780406 and protein with PDB id: 1v9f

>gi|49259508|pdb|1V9F|A Chain A, Crystal Structure Of Catalytic Domain Of Pseudouridine Synthase Rlud From Escherichia Coli Length = 325
>gi|118138510|pdb|2IST|A Chain A, Crystal Structure Of Rlud From E. Coli Length = 325
 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/239 (12%), Positives = 65/239 (27%), Gaps = 31/239 (12%)

Query: 6   IVQENFTPQRVSKVIARAG-IASRREVERMIAQQRVKVNGILLERAAVNVMSTDHIEVDG 64
            V EN   QR+ + +A      SR  ++  I  QRV VNG + ++    V+  + + ++ 
Sbjct: 9   TVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVLGGEQVAINA 68

Query: 65  VP--------------LRKAERTRLWLYHKPIGLVTTHSDPDGRSTVFDNLPSIF----- 105
                           +   +   + +      +V   +     + +   L         
Sbjct: 69  EIEEEARFEPQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADV 128

Query: 106 SRVISVGRLDINTEGLLLLTNDGGLARVLELPSTQWLRVYRVRFHGQVDQ---------- 155
            R   V RLD +T GL+++         L     +                         
Sbjct: 129 PRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAGGTVDEPI 188

Query: 156 -DKLNLLKKGIVIQGICYGDMQVTLDTQKGSNAWVTVGLREGKNREIKKVFEFFNWKVN 213
                      V            +      +  + + L  G+  +I+         + 
Sbjct: 189 SRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLV 247