RPSBLAST alignment for GI: 254780406 and conserved domain: cd02553

>gnl|CDD|30010 cd02553, PseudoU_synth_RsuA, PseudoU_synth_RsuA: Pseudouridine synthase, Escherichia coli RsuA like. This group is comprised of eukaryotic and bacterial proteins similar to Escherichia coli RsuA. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. E.coli RsuA makes psi516 in 16S RNA. Psi at this position is not generally conserved in other organisms.. Length = 167

 Score =  107 bits (269), Expect = 4e-24
 Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 7/165 (4%)

Query: 77  LYHKPIGLVTTHSDPDGRSTVFDNLPSIFSR--VISVGRLDINTEGLLLLTNDGGLARVL 134
           + +KP G+V    DP    TV D LP    R  +  VGRLD +T GLLLLTNDG LA  L
Sbjct: 4   MLNKPAGVVCATKDPHHP-TVIDLLPEPDRRRDLFPVGRLDKDTTGLLLLTNDGQLAHRL 62

Query: 135 ELPSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQGICYGDMQVTLDTQKGSNAWVTVGLR 194
             P     + Y V   G + +D +    +G+++     G        +  S   V + + 
Sbjct: 63  TSPKKHVPKTYEVTLAGPLTEDDIEAFAEGVLLHD---GYPTKPAKLEILSPTTVRLTIT 119

Query: 195 EGKNREIKKVFEFFNWKVNRLIRISYGPFQLG-TLLAGSTREVSK 238
           EGK  ++K++F     KV  L RI  G  +L   L  G  R +++
Sbjct: 120 EGKYHQVKRMFAAVGNKVVALHRIRIGGLELDDDLAPGEWRPLTE 164