RPSBLAST alignment for GI: 254780406 and conserved domain: COG1187

>gnl|CDD|31380 COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]. Length = 248

 Score =  220 bits (563), Expect = 3e-58
 Identities = 91/236 (38%), Positives = 129/236 (54%), Gaps = 8/236 (3%)

Query: 12  TPQRVSKVIARAGIASRREVERMIAQQRVKVNGILLERAAVNVM-STDHIEVDGVPLRKA 70
              R++K +A AG+ SRRE E++I + RV VNG +     V V    D +EVDG  +   
Sbjct: 1   DSMRLNKFLAEAGVGSRREAEKLIEEGRVTVNGKVATLGGVVVDPDDDVVEVDGKRIELK 60

Query: 71  ERTRLWLYHKPIGLVTTHSDPDGRSTVFDNLP---SIFSRVISVGRLDINTEGLLLLTND 127
           E     L +KP G V++  D +GR TVFD LP       R+  VGRLD +TEGLLLLTND
Sbjct: 61  EERVYLLLNKPRGYVSSTEDDEGRPTVFDLLPERLPRKKRLFPVGRLDKDTEGLLLLTND 120

Query: 128 GGLARVLELPSTQWLRVYRVRFHGQVDQDKLNLLKKGIVIQGICYG--DMQVTLDTQKGS 185
           G LA  L  PS++  + Y VR  G V ++ L  L+KG+ +                   +
Sbjct: 121 GELAHRLMHPSSEVEKEYLVRVEGPVTEEDLEKLRKGVTLDDGETKPAKPASLEKEPGKN 180

Query: 186 NAWVTVGLREGKNREIKKVFEFFNWKVNRLIRISYGPFQLGT--LLAGSTREVSKK 239
           N+W+ + L EG+NR+++++FE    +V RL RI  GP  LG   L  G  RE++ +
Sbjct: 181 NSWLRITLTEGRNRQVRRMFEAVGLEVLRLKRIRIGPLSLGDLPLPPGEWRELTLE 236